Query 047800
Match_columns 547
No_of_seqs 397 out of 3151
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 05:12:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047800.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047800hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3omv_A RAF proto-oncogene seri 100.0 4.4E-47 1.5E-51 374.6 15.6 256 245-543 42-303 (307)
2 4gt4_A Tyrosine-protein kinase 100.0 9.2E-48 3.1E-52 381.0 9.1 261 232-538 20-304 (308)
3 4asz_A BDNF/NT-3 growth factor 100.0 4.6E-47 1.6E-51 374.4 8.3 252 244-541 18-290 (299)
4 4aoj_A High affinity nerve gro 100.0 1.4E-46 4.7E-51 376.1 11.4 251 245-541 47-320 (329)
5 4fih_A Serine/threonine-protei 100.0 2.6E-45 8.8E-50 366.6 11.6 242 247-534 82-324 (346)
6 3hmm_A TGF-beta receptor type- 100.0 2.5E-45 8.7E-50 364.1 9.6 225 315-542 54-299 (303)
7 4b9d_A Serine/threonine-protei 100.0 2.9E-45 1E-49 366.7 9.5 246 245-534 30-277 (350)
8 3fpq_A Serine/threonine-protei 100.0 2E-44 6.7E-49 353.1 14.2 243 246-534 33-283 (290)
9 4ase_A Vascular endothelial gr 100.0 2.4E-45 8.1E-50 370.1 7.9 256 245-543 70-350 (353)
10 4g3f_A NF-kappa-beta-inducing 100.0 2.9E-44 9.8E-49 358.0 14.7 248 246-542 65-318 (336)
11 4fie_A Serine/threonine-protei 100.0 3.3E-44 1.1E-48 367.3 12.2 243 246-534 158-401 (423)
12 3hyh_A Carbon catabolite-derep 100.0 1.7E-43 5.8E-48 343.5 11.6 243 245-534 19-263 (275)
13 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.9E-44 9.8E-49 353.7 4.5 243 245-532 38-283 (311)
14 3ubd_A Ribosomal protein S6 ki 100.0 6.1E-43 2.1E-47 344.2 9.8 197 312-533 80-281 (304)
15 4g31_A Eukaryotic translation 100.0 2.2E-41 7.5E-46 334.3 11.6 240 247-533 13-279 (299)
16 4b99_A Mitogen-activated prote 100.0 3.1E-39 1.1E-43 331.0 13.9 261 245-533 60-344 (398)
17 4f9c_A Cell division cycle 7-r 100.0 1.2E-38 4E-43 323.2 12.5 212 316-534 78-353 (361)
18 3v5w_A G-protein coupled recep 100.0 1E-38 3.5E-43 341.1 10.0 248 245-533 195-449 (689)
19 3uto_A Twitchin; kinase, muscl 100.0 2E-38 6.7E-43 340.7 10.3 244 246-533 164-410 (573)
20 3s95_A LIMK-1, LIM domain kina 100.0 1.6E-37 5.4E-42 310.0 11.5 255 245-543 16-285 (310)
21 3p86_A Serine/threonine-protei 100.0 1.1E-37 3.8E-42 310.9 10.2 265 233-542 30-300 (309)
22 3soc_A Activin receptor type-2 100.0 1.2E-37 4.2E-42 312.6 10.6 222 315-541 75-319 (322)
23 3fxz_A Serine/threonine-protei 100.0 4.3E-37 1.5E-41 305.0 11.1 195 317-534 76-270 (297)
24 2psq_A Fibroblast growth facto 100.0 9.8E-37 3.3E-41 311.8 13.7 203 317-542 146-366 (370)
25 3lb7_A RAF proto-oncogene seri 100.0 2E-36 6.7E-41 301.7 14.0 209 316-543 90-303 (307)
26 3cbl_A C-FES, proto-oncogene t 100.0 1.3E-37 4.6E-42 319.2 5.6 253 245-542 120-376 (377)
27 3kul_A Ephrin type-A receptor 100.0 7E-37 2.4E-41 307.4 9.5 203 316-541 108-314 (325)
28 2qol_A Ephrin receptor; recept 100.0 9.2E-37 3.2E-41 312.3 10.3 203 316-541 104-310 (373)
29 3uim_A Brassinosteroid insensi 100.0 3.1E-36 1.1E-40 302.8 13.4 213 316-537 85-308 (326)
30 2qkw_B Protein kinase; three-h 100.0 6.9E-36 2.4E-40 299.6 15.9 216 316-540 93-315 (321)
31 1tki_A Titin; serine kinase, m 100.0 1.6E-36 5.6E-41 304.1 10.2 198 317-535 60-259 (321)
32 2izr_A Casein kinase I isoform 100.0 1.2E-35 4E-40 299.2 16.2 257 244-542 14-283 (330)
33 3rgz_A Protein brassinosteroid 100.0 5.8E-35 2E-39 326.7 22.1 254 3-271 435-745 (768)
34 3zgw_A Maternal embryonic leuc 100.0 3.1E-36 1.1E-40 304.7 10.4 244 245-535 16-262 (347)
35 4hcu_A Tyrosine-protein kinase 100.0 3.4E-36 1.2E-40 294.0 10.1 202 317-541 64-267 (269)
36 3vhe_A Vascular endothelial gr 100.0 1.7E-36 5.8E-41 308.8 8.3 206 316-543 84-358 (359)
37 1mp8_A Focal adhesion kinase 1 100.0 2.5E-36 8.5E-41 296.9 9.0 205 316-544 74-280 (281)
38 1ogq_A PGIP-2, polygalacturona 100.0 2.7E-35 9.1E-40 294.2 16.6 239 2-270 68-308 (313)
39 2c30_A Serine/threonine-protei 100.0 5.7E-36 1.9E-40 300.3 11.6 242 247-534 53-295 (321)
40 3op5_A Serine/threonine-protei 100.0 2E-35 6.7E-40 301.7 15.6 216 313-542 103-331 (364)
41 2yab_A Death-associated protei 100.0 7.5E-36 2.6E-40 303.7 11.8 250 245-533 18-272 (361)
42 3c1x_A Hepatocyte growth facto 100.0 3.1E-36 1E-40 308.2 8.1 207 314-543 146-358 (373)
43 3kn6_A Ribosomal protein S6 ki 100.0 6.1E-36 2.1E-40 300.5 10.2 204 316-533 64-270 (325)
44 3l9p_A Anaplastic lymphoma kin 100.0 4.4E-36 1.5E-40 306.7 9.2 203 317-542 133-347 (367)
45 3mdy_A Bone morphogenetic prot 100.0 6E-35 2.1E-39 294.5 17.3 214 315-542 88-333 (337)
46 1csn_A Casein kinase-1; phosph 100.0 5.1E-35 1.8E-39 289.8 16.5 208 316-542 64-285 (298)
47 3fe3_A MAP/microtubule affinit 100.0 6.2E-36 2.1E-40 300.6 9.7 192 317-534 73-265 (328)
48 4dc2_A Protein kinase C IOTA t 100.0 1.3E-35 4.6E-40 304.7 12.3 247 246-528 59-307 (396)
49 1o6l_A RAC-beta serine/threoni 100.0 1.2E-35 4E-40 299.5 11.6 194 316-534 63-261 (337)
50 4eqm_A Protein kinase; transfe 100.0 6.7E-36 2.3E-40 295.9 9.6 204 316-539 69-274 (294)
51 3kex_A Receptor tyrosine-prote 100.0 7.2E-36 2.5E-40 300.1 10.0 201 317-541 74-277 (325)
52 1rjb_A FL cytokine receptor; k 100.0 4.7E-36 1.6E-40 303.8 8.4 218 296-545 95-339 (344)
53 3poz_A Epidermal growth factor 100.0 5E-36 1.7E-40 301.5 8.4 213 296-542 64-280 (327)
54 3gen_A Tyrosine-protein kinase 100.0 9.4E-36 3.2E-40 293.0 10.1 202 317-541 78-281 (283)
55 3sxs_A Cytoplasmic tyrosine-pr 100.0 3.8E-36 1.3E-40 293.4 7.0 202 317-541 62-265 (268)
56 3pls_A Macrophage-stimulating 100.0 1.6E-35 5.3E-40 293.5 11.5 206 317-544 81-291 (298)
57 4f0f_A Serine/threonine-protei 100.0 5.9E-35 2E-39 287.9 15.4 253 245-538 25-287 (287)
58 2y0a_A Death-associated protei 100.0 3.2E-35 1.1E-39 295.4 13.5 251 245-534 17-272 (326)
59 1t46_A HOMO sapiens V-KIT hard 100.0 8.3E-36 2.8E-40 297.6 9.0 216 296-543 73-310 (313)
60 1opk_A P150, C-ABL, proto-onco 100.0 8.5E-36 2.9E-40 316.4 9.5 248 245-539 226-477 (495)
61 3soa_A Calcium/calmodulin-depe 100.0 7.4E-35 2.5E-39 304.1 16.4 197 317-534 69-268 (444)
62 1luf_A Muscle-specific tyrosin 100.0 6.1E-36 2.1E-40 302.7 7.7 204 317-543 109-338 (343)
63 2nru_A Interleukin-1 receptor- 100.0 1E-34 3.5E-39 289.0 16.5 212 317-540 89-306 (307)
64 3ugc_A Tyrosine-protein kinase 100.0 1.3E-35 4.5E-40 293.8 9.7 217 317-542 70-293 (295)
65 3q4u_A Activin receptor type-1 100.0 6.4E-35 2.2E-39 289.5 14.5 213 315-538 59-300 (301)
66 1k9a_A Carboxyl-terminal SRC k 100.0 1.8E-35 6.3E-40 310.3 11.1 243 246-541 200-446 (450)
67 3kfa_A Tyrosine-protein kinase 100.0 1.7E-35 5.9E-40 291.8 10.1 250 246-542 20-273 (288)
68 3tt0_A Basic fibroblast growth 100.0 7.3E-35 2.5E-39 299.4 15.2 203 317-542 134-354 (382)
69 2x4f_A Myosin light chain kina 100.0 2.3E-35 7.9E-40 301.8 10.8 246 245-534 95-343 (373)
70 3tki_A Serine/threonine-protei 100.0 3E-35 1E-39 295.2 11.3 245 246-534 14-262 (323)
71 3dtc_A Mitogen-activated prote 100.0 1.5E-35 5E-40 289.6 8.7 196 317-538 65-271 (271)
72 3niz_A Rhodanese family protei 100.0 7.2E-35 2.5E-39 290.9 13.9 211 317-533 78-300 (311)
73 3f66_A Hepatocyte growth facto 100.0 1.6E-35 5.5E-40 293.6 9.0 204 317-543 85-294 (298)
74 2bdw_A Hypothetical protein K1 100.0 4.4E-35 1.5E-39 298.6 12.3 196 317-534 87-285 (362)
75 3g2f_A Bone morphogenetic prot 100.0 4.8E-35 1.6E-39 295.3 12.3 226 314-544 63-322 (336)
76 1mqb_A Ephrin type-A receptor 100.0 3.5E-35 1.2E-39 296.1 11.3 203 317-542 105-311 (333)
77 2pvf_A Fibroblast growth facto 100.0 3.7E-35 1.2E-39 296.1 11.4 203 317-542 100-320 (334)
78 2ozo_A Tyrosine-protein kinase 100.0 3.3E-35 1.1E-39 319.3 11.9 203 317-543 395-601 (613)
79 3lxp_A Non-receptor tyrosine-p 100.0 2.5E-35 8.6E-40 295.2 10.1 217 317-544 92-314 (318)
80 2pmi_A Negative RE, cyclin-dep 100.0 6E-35 2E-39 292.3 12.8 262 246-534 12-294 (317)
81 4e5w_A Tyrosine-protein kinase 100.0 1.8E-35 6.1E-40 293.7 8.8 214 317-539 82-301 (302)
82 1xjd_A Protein kinase C, theta 100.0 1.2E-35 4.3E-40 300.2 7.6 191 317-532 77-268 (345)
83 2r5t_A Serine/threonine-protei 100.0 3.8E-35 1.3E-39 299.7 11.2 197 312-533 93-289 (373)
84 3lzb_A Epidermal growth factor 100.0 2.9E-35 9.9E-40 295.9 9.9 202 317-542 76-280 (327)
85 3cc6_A Protein tyrosine kinase 100.0 5.4E-35 1.8E-39 287.4 11.4 215 296-544 60-277 (281)
86 4euu_A Serine/threonine-protei 100.0 1.9E-34 6.6E-39 288.8 15.7 266 246-537 16-306 (319)
87 3a8x_A Protein kinase C IOTA t 100.0 4E-35 1.4E-39 296.8 10.8 196 316-528 68-264 (345)
88 2i1m_A Macrophage colony-stimu 100.0 1.3E-35 4.6E-40 299.0 7.2 207 317-545 109-331 (333)
89 3o0g_A Cell division protein k 100.0 5E-35 1.7E-39 289.3 11.0 215 316-534 59-283 (292)
90 3c0i_A Peripheral plasma membr 100.0 9.1E-35 3.1E-39 295.2 12.9 208 296-534 73-287 (351)
91 3uc3_A Serine/threonine-protei 100.0 6.8E-35 2.3E-39 297.2 11.7 246 245-534 26-275 (361)
92 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3.1E-34 1.1E-38 293.0 16.5 200 315-542 124-341 (365)
93 4hgt_A Casein kinase I isoform 100.0 2.9E-34 1E-38 284.0 15.8 221 296-543 51-283 (296)
94 1u59_A Tyrosine-protein kinase 100.0 3.7E-35 1.3E-39 289.4 9.3 203 317-543 69-275 (287)
95 3qup_A Tyrosine-protein kinase 100.0 3.6E-35 1.2E-39 294.6 9.0 204 316-542 83-300 (323)
96 2qr7_A Ribosomal protein S6 ki 100.0 2.9E-35 9.8E-40 297.5 8.3 201 317-535 75-279 (342)
97 3p1a_A MYT1 kinase, membrane-a 100.0 8.8E-35 3E-39 290.3 11.7 191 316-534 115-305 (311)
98 2wqm_A Serine/threonine-protei 100.0 1.4E-34 5E-39 288.5 13.1 206 317-542 91-299 (310)
99 3txo_A PKC-L, NPKC-ETA, protei 100.0 3.2E-35 1.1E-39 298.3 8.4 193 316-533 82-280 (353)
100 2zv2_A Calcium/calmodulin-depe 100.0 5.6E-35 1.9E-39 289.8 9.9 194 317-534 95-293 (298)
101 1qcf_A Haematopoetic cell kina 100.0 1.9E-35 6.6E-40 310.6 6.6 246 246-540 195-444 (454)
102 3v8s_A RHO-associated protein 100.0 2.4E-35 8.1E-40 304.5 7.1 247 246-534 76-330 (410)
103 3brb_A Proto-oncogene tyrosine 100.0 1.4E-34 4.7E-39 289.0 12.5 203 317-542 95-310 (313)
104 2w4o_A Calcium/calmodulin-depe 100.0 6.6E-35 2.3E-39 295.9 10.3 242 246-533 60-305 (349)
105 1fot_A TPK1 delta, CAMP-depend 100.0 1.1E-34 3.9E-39 290.1 11.8 190 316-533 64-258 (318)
106 2ivs_A Proto-oncogene tyrosine 100.0 9.6E-35 3.3E-39 290.0 11.2 203 316-541 84-312 (314)
107 2eva_A TAK1 kinase - TAB1 chim 100.0 3E-34 1E-38 285.9 14.7 202 317-541 60-264 (307)
108 3uzp_A CKI-delta, CKID, casein 100.0 4.3E-34 1.5E-38 282.8 15.6 256 245-542 15-282 (296)
109 4fr4_A YANK1, serine/threonine 100.0 8.5E-35 2.9E-39 297.7 10.8 195 316-533 73-271 (384)
110 1kob_A Twitchin; kinase, intra 100.0 5.2E-35 1.8E-39 300.2 9.2 198 316-534 106-305 (387)
111 1fvr_A Tyrosine-protein kinase 100.0 6.1E-35 2.1E-39 293.5 9.0 203 316-542 84-302 (327)
112 1ob3_A PFPK5, cell division co 100.0 1.2E-34 3.9E-39 286.1 10.8 215 316-534 58-281 (288)
113 3t9t_A Tyrosine-protein kinase 100.0 1.3E-34 4.6E-39 282.1 10.7 202 317-541 62-265 (267)
114 3kmu_A ILK, integrin-linked ki 100.0 2.4E-34 8.1E-39 280.7 12.5 200 314-540 63-270 (271)
115 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.9E-34 6.4E-39 290.5 11.8 192 316-534 67-259 (336)
116 3og7_A AKAP9-BRAF fusion prote 100.0 2.6E-34 9E-39 283.7 12.5 205 316-539 78-287 (289)
117 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 4.8E-35 1.6E-39 307.3 7.6 246 246-540 191-440 (452)
118 2i0e_A Protein kinase C-beta I 100.0 3.6E-34 1.2E-38 290.4 13.5 194 315-533 78-276 (353)
119 3qd2_B Eukaryotic translation 100.0 2.1E-34 7.3E-39 289.7 11.7 178 332-534 135-326 (332)
120 4aw2_A Serine/threonine-protei 100.0 6.4E-35 2.2E-39 303.6 8.1 249 246-534 81-339 (437)
121 4fl3_A Tyrosine-protein kinase 100.0 9.3E-35 3.2E-39 316.6 9.3 212 296-542 417-633 (635)
122 4agu_A Cyclin-dependent kinase 100.0 1.9E-34 6.5E-39 287.6 10.8 212 317-534 61-285 (311)
123 2v62_A Serine/threonine-protei 100.0 2.6E-34 8.8E-39 291.2 11.9 209 315-538 105-326 (345)
124 2j7t_A Serine/threonine-protei 100.0 1.4E-34 4.7E-39 287.3 9.1 244 246-533 26-275 (302)
125 2a2a_A Death-associated protei 100.0 6.9E-34 2.4E-38 285.1 14.1 250 246-534 19-273 (321)
126 4fvq_A Tyrosine-protein kinase 100.0 1E-34 3.5E-39 286.4 7.6 197 317-541 71-276 (289)
127 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.3E-34 4.6E-39 293.5 8.6 190 316-533 99-293 (350)
128 2ac3_A MAP kinase-interacting 100.0 2.2E-34 7.4E-39 287.9 10.0 209 316-534 69-296 (316)
129 2y94_A 5'-AMP-activated protei 100.0 2.1E-34 7.2E-39 302.7 10.4 193 316-534 74-267 (476)
130 4eut_A Serine/threonine-protei 100.0 9.8E-35 3.4E-39 299.9 7.7 270 246-541 16-310 (396)
131 2vd5_A DMPK protein; serine/th 100.0 1.4E-34 4.7E-39 299.0 8.6 197 316-533 119-327 (412)
132 3mtl_A Cell division protein k 100.0 6.4E-35 2.2E-39 293.0 5.9 215 316-534 58-282 (324)
133 2h34_A Serine/threonine-protei 100.0 2.9E-34 9.9E-39 286.3 10.4 205 316-542 92-298 (309)
134 4ejn_A RAC-alpha serine/threon 100.0 5.7E-34 2E-38 298.8 13.1 198 311-533 201-404 (446)
135 3gni_B Strad alpha; kinase fol 100.0 7.6E-34 2.6E-38 292.6 13.7 215 317-534 85-334 (389)
136 3f3z_A Calcium/calmodulin-depe 100.0 5.1E-34 1.7E-38 279.7 11.7 196 316-534 64-262 (277)
137 3dls_A PAS domain-containing s 100.0 3.5E-34 1.2E-38 288.9 10.8 187 316-534 87-275 (335)
138 1xbb_A Tyrosine-protein kinase 100.0 4.8E-34 1.6E-38 282.1 11.6 203 317-544 77-283 (291)
139 3com_A Serine/threonine-protei 100.0 5.1E-34 1.7E-38 285.0 11.8 197 317-534 83-279 (314)
140 2xir_A Vascular endothelial gr 100.0 4.4E-34 1.5E-38 285.5 11.2 206 317-544 90-314 (316)
141 3a62_A Ribosomal protein S6 ki 100.0 7.2E-34 2.5E-38 285.7 12.8 192 317-533 80-276 (327)
142 3g33_A Cell division protein k 100.0 2.7E-33 9.1E-38 279.1 16.8 212 317-534 73-297 (308)
143 1nxk_A MAP kinase-activated pr 100.0 6.4E-34 2.2E-38 293.9 12.6 203 316-535 113-323 (400)
144 2eue_A Carbon catabolite derep 100.0 3.5E-34 1.2E-38 280.6 10.1 191 317-534 72-263 (275)
145 3kk8_A Calcium/calmodulin depe 100.0 4.4E-34 1.5E-38 281.1 10.8 196 317-534 64-262 (284)
146 3cok_A Serine/threonine-protei 100.0 4.3E-34 1.5E-38 280.4 10.7 195 316-534 69-263 (278)
147 3a7i_A MST3 kinase, serine/thr 100.0 4.3E-34 1.5E-38 284.1 10.8 194 317-535 79-272 (303)
148 2yfx_A Tyrosine-protein kinase 100.0 2.5E-34 8.6E-39 289.0 9.2 202 317-541 92-305 (327)
149 3llt_A Serine/threonine kinase 100.0 6.3E-34 2.1E-38 290.1 12.1 213 313-533 91-355 (360)
150 1u5q_A Serine/threonine protei 100.0 2E-34 7E-39 292.1 8.4 191 317-534 113-306 (348)
151 3oz6_A Mitogen-activated prote 100.0 5.6E-34 1.9E-38 293.5 11.4 212 316-534 67-329 (388)
152 2y4i_B KSR2, HKSR2, kinase sup 100.0 5.5E-34 1.9E-38 285.3 11.0 205 315-542 86-304 (319)
153 2rku_A Serine/threonine-protei 100.0 2.7E-34 9.4E-39 284.2 8.6 194 316-534 73-266 (294)
154 4aaa_A Cyclin-dependent kinase 100.0 4.3E-34 1.5E-38 287.9 10.0 263 246-534 32-307 (331)
155 1u46_A ACK-1, activated CDC42 100.0 2.5E-34 8.5E-39 283.8 7.9 203 317-542 80-286 (291)
156 2buj_A Serine/threonine-protei 100.0 3.3E-34 1.1E-38 286.7 8.9 203 316-539 84-305 (317)
157 1qpc_A LCK kinase; alpha beta 100.0 3.3E-34 1.1E-38 281.3 8.8 214 296-543 55-272 (279)
158 3lxl_A Tyrosine-protein kinase 100.0 4E-34 1.4E-38 287.5 9.5 219 316-542 82-305 (327)
159 3ork_A Serine/threonine protei 100.0 5.7E-34 2E-38 284.4 10.5 209 308-537 62-278 (311)
160 2j0j_A Focal adhesion kinase 1 100.0 6.5E-34 2.2E-38 311.1 11.7 203 317-543 450-654 (656)
161 1t4h_A Serine/threonine-protei 100.0 2.1E-33 7.2E-38 277.3 14.2 194 316-534 83-283 (290)
162 2jii_A Serine/threonine-protei 100.0 1.1E-33 3.8E-38 287.4 12.5 223 296-542 89-338 (352)
163 3rp9_A Mitogen-activated prote 100.0 2.7E-33 9.1E-38 294.9 15.8 187 245-457 59-279 (458)
164 2a19_B Interferon-induced, dou 100.0 5.5E-34 1.9E-38 280.2 9.9 242 246-543 18-277 (284)
165 3dbq_A Dual specificity protei 100.0 1.4E-33 4.6E-38 285.7 13.0 257 235-535 4-275 (343)
166 2owb_A Serine/threonine-protei 100.0 2.7E-34 9.4E-39 289.8 7.9 194 316-534 99-292 (335)
167 3n9x_A Phosphotransferase; mal 100.0 1.2E-33 4E-38 295.1 12.8 204 234-463 21-253 (432)
168 2yex_A Serine/threonine-protei 100.0 2E-33 7E-38 275.1 13.7 197 316-534 63-262 (276)
169 1b6c_B TGF-B superfamily recep 100.0 1.4E-33 4.9E-38 285.1 12.8 217 316-543 94-339 (342)
170 1byg_A CSK, protein (C-termina 100.0 4.2E-34 1.4E-38 280.5 8.6 201 316-542 72-275 (278)
171 3pfq_A PKC-B, PKC-beta, protei 100.0 1.9E-33 6.4E-38 308.4 14.5 194 315-533 399-597 (674)
172 3mwu_A Calmodulin-domain prote 100.0 1.7E-33 5.7E-38 298.6 13.6 195 317-534 80-277 (486)
173 2jam_A Calcium/calmodulin-depe 100.0 2E-33 6.7E-38 279.5 13.1 195 317-534 65-262 (304)
174 3gbz_A Kinase, CMGC CDK; ssgci 100.0 8.6E-34 2.9E-38 285.4 10.5 213 316-533 91-318 (329)
175 3lij_A Calcium/calmodulin depe 100.0 1.4E-33 4.8E-38 299.7 12.8 245 246-534 44-292 (494)
176 3is5_A Calcium-dependent prote 100.0 2E-33 6.7E-38 276.9 12.9 194 317-533 79-278 (285)
177 1cm8_A Phosphorylated MAP kina 100.0 4.2E-33 1.4E-37 284.6 15.8 258 245-534 31-308 (367)
178 3i6u_A CDS1, serine/threonine- 100.0 2.7E-33 9.4E-38 291.0 14.6 250 246-534 142-400 (419)
179 3ttj_A Mitogen-activated prote 100.0 3E-33 1E-37 294.1 14.9 209 317-534 120-356 (464)
180 2clq_A Mitogen-activated prote 100.0 5.4E-34 1.8E-38 282.0 8.5 244 247-534 30-279 (295)
181 1p4o_A Insulin-like growth fac 100.0 5.8E-34 2E-38 285.6 8.7 203 316-541 86-300 (322)
182 3sv0_A Casein kinase I-like; t 100.0 4.8E-33 1.6E-37 293.0 16.0 257 245-542 13-280 (483)
183 3eqc_A Dual specificity mitoge 100.0 3.6E-34 1.2E-38 291.9 7.1 212 316-535 89-326 (360)
184 3gxj_A TGF-beta receptor type- 100.0 1.7E-35 5.7E-40 294.0 -2.9 217 315-542 54-299 (303)
185 3rgz_A Protein brassinosteroid 100.0 2.2E-32 7.5E-37 305.8 21.9 241 2-270 410-721 (768)
186 3fdn_A Serine/threonine-protei 100.0 2.2E-33 7.6E-38 275.5 12.1 193 316-535 67-259 (279)
187 3c4z_A Rhodopsin kinase; Ser/T 100.0 8.7E-34 3E-38 301.5 9.8 197 317-533 244-448 (543)
188 3bhy_A Death-associated protei 100.0 3.8E-33 1.3E-37 274.3 13.5 196 317-534 67-266 (283)
189 2h8h_A Proto-oncogene tyrosine 100.0 3E-34 1E-38 307.3 6.1 246 246-540 274-523 (535)
190 3lm5_A Serine/threonine-protei 100.0 8.1E-34 2.8E-38 285.4 8.9 198 316-534 87-288 (327)
191 2w1i_A JAK2; chromosomal rearr 100.0 2.4E-33 8.1E-38 281.8 12.3 215 317-543 101-325 (326)
192 3nyv_A Calmodulin-domain prote 100.0 7E-34 2.4E-38 301.4 8.8 196 316-534 84-282 (484)
193 3mi9_A Cell division protein k 100.0 8.3E-33 2.8E-37 280.8 16.3 265 245-534 23-312 (351)
194 3ll6_A Cyclin G-associated kin 100.0 3.8E-33 1.3E-37 281.1 13.6 260 233-541 21-309 (337)
195 3q5i_A Protein kinase; CDPK, m 100.0 2.7E-33 9.4E-38 298.2 13.1 195 317-534 105-302 (504)
196 3kvw_A DYRK2, dual specificity 100.0 3.2E-33 1.1E-37 291.3 13.2 197 246-467 104-304 (429)
197 2vwi_A Serine/threonine-protei 100.0 7.3E-34 2.5E-38 282.1 7.7 207 314-534 69-288 (303)
198 3fme_A Dual specificity mitoge 100.0 1.3E-33 4.3E-38 278.6 9.4 197 315-534 63-267 (290)
199 2w5a_A Serine/threonine-protei 100.0 1.9E-34 6.6E-39 282.9 3.5 197 317-536 64-270 (279)
200 3nsz_A CK II alpha, casein kin 100.0 3.7E-33 1.3E-37 280.8 12.8 211 316-534 89-320 (330)
201 1ua2_A CAK, cell division prot 100.0 3.5E-33 1.2E-37 283.0 12.6 213 317-534 71-292 (346)
202 3hko_A Calcium/calmodulin-depe 100.0 3.5E-33 1.2E-37 282.7 12.6 198 317-534 87-331 (345)
203 3qyz_A Mitogen-activated prote 100.0 3.7E-33 1.3E-37 284.8 12.8 272 233-533 21-313 (364)
204 2acx_A G protein-coupled recep 100.0 9.4E-34 3.2E-38 302.1 7.1 197 317-534 243-445 (576)
205 3q60_A ROP5B; pseudokinase, tr 100.0 3.6E-34 1.2E-38 293.1 3.6 185 331-534 161-353 (371)
206 2r3i_A Cell division protein k 100.0 6.7E-33 2.3E-37 274.7 12.4 212 316-533 60-283 (299)
207 3rgf_A Cyclin-dependent kinase 100.0 7.8E-33 2.7E-37 286.6 13.4 193 244-465 26-239 (405)
208 3byv_A Rhoptry kinase; malaria 100.0 2.4E-34 8.3E-39 295.0 1.9 247 245-541 79-369 (377)
209 2x7f_A TRAF2 and NCK-interacti 100.0 2.7E-33 9.1E-38 281.3 9.4 196 317-534 80-287 (326)
210 2vgo_A Serine/threonine-protei 100.0 8.6E-33 2.9E-37 272.0 12.7 191 317-534 73-263 (284)
211 2b9h_A MAP kinase FUS3, mitoge 100.0 4.6E-33 1.6E-37 282.8 10.8 262 245-534 17-306 (353)
212 2fst_X Mitogen-activated prote 100.0 7.3E-33 2.5E-37 282.6 12.1 258 245-534 35-312 (367)
213 3an0_A Dual specificity mitoge 100.0 2.6E-33 8.9E-38 283.2 8.7 197 315-534 107-311 (340)
214 2y7j_A Phosphorylase B kinase 100.0 1.8E-32 6.3E-37 279.7 14.8 197 316-534 158-360 (365)
215 2zmd_A Dual specificity protei 100.0 2.4E-32 8.3E-37 281.2 15.7 194 317-534 115-321 (390)
216 1wak_A Serine/threonine-protei 100.0 1.4E-32 4.8E-37 283.5 13.7 266 246-534 44-392 (397)
217 1x8b_A WEE1HU, WEE1-like prote 100.0 5.5E-33 1.9E-37 273.4 10.1 189 316-534 69-280 (289)
218 2xrw_A Mitogen-activated prote 100.0 2.2E-32 7.6E-37 279.8 14.5 209 317-534 83-319 (371)
219 3eb0_A Putative uncharacterize 100.0 8.4E-33 2.9E-37 284.2 11.3 213 316-534 58-322 (383)
220 3zyi_A Leucine-rich repeat-con 100.0 2E-31 7E-36 280.0 21.5 235 2-268 69-305 (452)
221 3v47_A TOLL-like receptor 5B a 100.0 1.6E-31 5.5E-36 281.0 20.6 257 3-268 47-410 (455)
222 2h6d_A 5'-AMP-activated protei 100.0 1.8E-32 6.1E-37 268.4 12.1 192 317-534 70-262 (276)
223 4exu_A Mitogen-activated prote 100.0 2.1E-32 7.2E-37 279.9 12.8 259 245-534 48-324 (371)
224 3zyj_A Leucine-rich repeat-con 100.0 2.4E-31 8.3E-36 278.4 21.0 235 2-268 58-294 (440)
225 3e3p_A Protein kinase, putativ 100.0 5E-32 1.7E-36 275.9 15.0 261 246-534 30-315 (360)
226 3fhr_A MAP kinase-activated pr 100.0 5.5E-33 1.9E-37 280.3 7.4 201 316-534 80-288 (336)
227 1zy4_A Serine/threonine-protei 100.0 1.2E-32 4.1E-37 273.1 9.6 197 316-534 60-284 (303)
228 1z57_A Dual specificity protei 100.0 5.3E-32 1.8E-36 272.9 14.4 211 315-534 74-329 (339)
229 1vzo_A Ribosomal protein S6 ki 100.0 1.8E-32 6E-37 278.8 10.4 198 317-535 118-323 (355)
230 1j1b_A Glycogen synthase kinas 100.0 2.6E-32 8.8E-37 283.8 10.7 255 246-534 61-337 (420)
231 2ycf_A Serine/threonine-protei 100.0 4.6E-32 1.6E-36 271.9 12.2 195 317-533 74-274 (322)
232 2i6l_A Mitogen-activated prote 100.0 3.2E-32 1.1E-36 272.3 10.9 211 317-534 67-306 (320)
233 2pml_X PFPK7, Ser/Thr protein 100.0 3.6E-32 1.2E-36 275.6 11.4 209 317-533 102-322 (348)
234 1phk_A Phosphorylase kinase; g 100.0 7.3E-32 2.5E-36 267.2 13.4 196 316-533 82-283 (298)
235 1ozn_A Reticulon 4 receptor; N 100.0 2.7E-31 9.3E-36 261.6 17.4 234 9-270 31-265 (285)
236 2id5_A Lingo-1, leucine rich r 100.0 1.8E-31 6.1E-36 282.4 16.9 249 3-268 49-335 (477)
237 1blx_A Cyclin-dependent kinase 100.0 1.9E-31 6.6E-36 267.6 16.1 211 317-533 73-296 (326)
238 3pg1_A Mitogen-activated prote 100.0 9.8E-32 3.4E-36 274.0 13.9 212 317-534 88-317 (362)
239 2z66_A Variable lymphocyte rec 100.0 4.5E-31 1.5E-35 262.7 18.2 238 2-268 22-263 (306)
240 2eu9_A Dual specificity protei 100.0 1.2E-31 4E-36 272.2 14.2 208 317-533 81-333 (355)
241 3coi_A Mitogen-activated prote 100.0 6.5E-32 2.2E-36 274.4 12.0 257 245-534 30-306 (353)
242 2dyl_A Dual specificity mitoge 100.0 3.2E-32 1.1E-36 272.2 9.4 197 316-534 82-284 (318)
243 2vx3_A Dual specificity tyrosi 100.0 2.2E-31 7.5E-36 273.5 15.7 145 317-466 115-262 (382)
244 3qa8_A MGC80376 protein; kinas 100.0 1.8E-31 6.2E-36 287.4 15.7 265 245-539 20-308 (676)
245 2wei_A Calmodulin-domain prote 100.0 6.1E-32 2.1E-36 266.4 10.6 195 317-534 80-277 (287)
246 4e7w_A Glycogen synthase kinas 100.0 1.1E-31 3.6E-36 276.8 12.7 212 317-534 91-322 (394)
247 3aln_A Dual specificity mitoge 100.0 3E-32 1E-36 273.9 8.2 200 315-534 78-286 (327)
248 1ogq_A PGIP-2, polygalacturona 100.0 1.6E-31 5.5E-36 266.8 13.2 232 10-270 50-285 (313)
249 3p23_A Serine/threonine-protei 100.0 1.6E-31 5.4E-36 278.4 13.6 196 316-533 76-283 (432)
250 2rio_A Serine/threonine-protei 100.0 1.2E-31 4.1E-36 280.0 12.5 197 317-533 68-295 (434)
251 3cek_A Dual specificity protei 100.0 1.8E-31 6.3E-36 266.4 12.8 260 232-535 20-294 (313)
252 3a99_A Proto-oncogene serine/t 100.0 5.5E-32 1.9E-36 271.1 9.0 243 244-534 48-294 (320)
253 3oja_A Leucine-rich immune mol 100.0 2.4E-31 8.2E-36 281.5 13.0 219 9-268 33-252 (487)
254 2iwi_A Serine/threonine-protei 100.0 1.5E-31 5.2E-36 266.8 10.2 186 316-534 96-284 (312)
255 2wtk_C Serine/threonine-protei 100.0 4.1E-31 1.4E-35 262.7 12.2 194 316-534 64-264 (305)
256 1q8y_A SR protein kinase; tran 100.0 4.3E-31 1.5E-35 270.3 11.6 212 316-534 84-334 (373)
257 3t6q_A CD180 antigen; protein- 100.0 3.4E-30 1.2E-34 280.8 19.2 252 5-268 273-562 (606)
258 3o6n_A APL1; leucine-rich repe 100.0 3.2E-30 1.1E-34 265.6 17.4 242 6-267 65-353 (390)
259 2id5_A Lingo-1, leucine rich r 100.0 6.1E-30 2.1E-34 270.7 19.7 254 2-267 26-310 (477)
260 1xku_A Decorin; proteoglycan, 100.0 1.9E-29 6.6E-34 253.7 21.5 237 10-267 52-307 (330)
261 2ft3_A Biglycan; proteoglycan, 100.0 2.4E-29 8.1E-34 253.3 22.0 243 2-268 48-309 (332)
262 2z80_A TOLL-like receptor 2, v 100.0 1.3E-30 4.6E-35 264.7 13.0 236 2-268 46-316 (353)
263 3v47_A TOLL-like receptor 5B a 100.0 1.2E-29 4E-34 266.7 20.0 238 10-266 30-360 (455)
264 4fcg_A Uncharacterized protein 100.0 9.2E-30 3.2E-34 255.6 17.8 230 8-265 79-313 (328)
265 3oja_B Anopheles plasmodium-re 100.0 8.8E-30 3E-34 276.8 17.7 243 6-268 71-360 (597)
266 2z66_A Variable lymphocyte rec 100.0 6.3E-30 2.1E-34 254.4 14.6 240 2-270 43-291 (306)
267 2pzi_A Probable serine/threoni 100.0 1.5E-30 5E-35 287.0 10.6 188 316-542 137-330 (681)
268 1ozn_A Reticulon 4 receptor; N 100.0 4.3E-29 1.5E-33 245.8 19.5 226 12-268 13-240 (285)
269 3zyj_A Leucine-rich repeat-con 100.0 4.5E-29 1.5E-33 261.2 20.7 212 3-245 81-294 (440)
270 4fcg_A Uncharacterized protein 100.0 2E-29 7E-34 253.1 17.2 212 1-244 95-315 (328)
271 3zyi_A Leucine-rich repeat-con 100.0 3.9E-29 1.3E-33 262.6 20.1 213 3-245 92-305 (452)
272 4g8a_A TOLL-like receptor 4; l 100.0 5.5E-29 1.9E-33 272.2 21.1 122 4-134 70-192 (635)
273 3uqc_A Probable conserved tran 100.0 8.5E-30 2.9E-34 250.9 12.7 229 246-542 38-267 (286)
274 1xku_A Decorin; proteoglycan, 100.0 2.4E-28 8.2E-33 245.7 23.1 234 10-268 31-278 (330)
275 3dzo_A Rhoptry kinase domain; 100.0 1.7E-30 6E-35 269.4 6.9 170 332-534 179-364 (413)
276 2z62_A TOLL-like receptor 4, v 100.0 7.6E-29 2.6E-33 242.8 17.0 215 2-247 22-241 (276)
277 3t6q_A CD180 antigen; protein- 100.0 1.5E-28 5E-33 267.9 20.6 246 3-265 50-362 (606)
278 3m2w_A MAP kinase-activated pr 100.0 1.8E-29 6.2E-34 250.3 12.2 181 316-534 69-257 (299)
279 2ft3_A Biglycan; proteoglycan, 100.0 3.5E-28 1.2E-32 244.7 20.7 239 2-269 19-280 (332)
280 4eco_A Uncharacterized protein 100.0 2.8E-29 9.7E-34 274.5 13.5 248 2-266 198-501 (636)
281 1ziw_A TOLL-like receptor 3; i 100.0 5E-28 1.7E-32 267.3 21.5 255 5-268 324-624 (680)
282 3o6n_A APL1; leucine-rich repe 100.0 6.5E-28 2.2E-32 248.3 20.1 229 8-266 43-308 (390)
283 4eco_A Uncharacterized protein 100.0 2.9E-28 1E-32 266.5 17.9 245 2-269 320-603 (636)
284 2o6q_A Variable lymphocyte rec 100.0 2.7E-27 9.3E-32 231.0 22.3 204 11-245 17-220 (270)
285 3j0a_A TOLL-like receptor 5; m 100.0 3.7E-28 1.3E-32 274.4 17.7 239 10-267 266-561 (844)
286 3oja_B Anopheles plasmodium-re 100.0 9.2E-28 3.2E-32 260.9 20.1 235 8-266 49-314 (597)
287 3vq2_A TLR4, TOLL-like recepto 100.0 2.8E-28 9.7E-33 265.6 16.0 244 5-269 302-561 (606)
288 3o53_A Protein LRIM1, AGAP0063 100.0 1.6E-28 5.5E-33 245.6 12.9 223 5-268 29-252 (317)
289 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 2.8E-27 9.4E-32 255.5 23.0 116 149-266 350-486 (562)
290 3j0a_A TOLL-like receptor 5; m 100.0 6.5E-28 2.2E-32 272.4 18.6 250 3-266 41-375 (844)
291 1wwl_A Monocyte differentiatio 100.0 2.9E-29 9.9E-34 250.4 5.5 223 12-266 65-309 (312)
292 2o6q_A Variable lymphocyte rec 100.0 6.4E-27 2.2E-31 228.4 21.7 204 34-268 16-220 (270)
293 1p9a_G Platelet glycoprotein I 100.0 3.8E-27 1.3E-31 232.3 20.2 203 6-243 6-208 (290)
294 1wwl_A Monocyte differentiatio 100.0 1.5E-28 5E-33 245.3 10.1 208 8-244 93-310 (312)
295 2z80_A TOLL-like receptor 2, v 99.9 1.9E-28 6.5E-33 248.8 10.3 221 4-247 70-318 (353)
296 4ecn_A Leucine-rich repeat pro 99.9 6.7E-28 2.3E-32 269.1 14.3 214 26-266 440-686 (876)
297 4ecn_A Leucine-rich repeat pro 99.9 1E-27 3.5E-32 267.6 15.5 240 2-266 440-741 (876)
298 1ziw_A TOLL-like receptor 3; i 99.9 3.1E-27 1.1E-31 261.0 18.8 246 10-265 25-308 (680)
299 1p9a_G Platelet glycoprotein I 99.9 1E-26 3.5E-31 229.2 20.5 206 29-268 5-210 (290)
300 2z62_A TOLL-like receptor 4, v 99.9 4.4E-27 1.5E-31 230.3 17.6 224 13-268 10-239 (276)
301 2z7x_B TOLL-like receptor 1, v 99.9 1.5E-27 5E-32 255.1 15.3 107 10-128 21-128 (520)
302 3a79_B TLR6, VLRB.59, TOLL-lik 99.9 8.6E-27 2.9E-31 251.6 19.9 88 173-266 350-441 (562)
303 2z63_A TOLL-like receptor 4, v 99.9 4E-27 1.4E-31 254.5 16.5 238 2-269 274-534 (570)
304 3rfs_A Internalin B, repeat mo 99.9 8.9E-27 3E-31 227.6 17.1 204 7-249 38-241 (272)
305 3oja_A Leucine-rich immune mol 99.9 1.3E-27 4.6E-32 252.7 10.5 277 3-330 51-351 (487)
306 2vuw_A Serine/threonine-protei 99.9 6.1E-28 2.1E-32 243.4 7.2 188 317-532 108-329 (336)
307 2z81_A CD282 antigen, TOLL-lik 99.9 3.1E-27 1E-31 254.3 12.5 69 198-266 325-400 (549)
308 2xwt_C Thyrotropin receptor; s 99.9 1.3E-26 4.4E-31 221.9 15.4 195 11-240 32-236 (239)
309 3o53_A Protein LRIM1, AGAP0063 99.9 1.3E-27 4.5E-32 238.9 8.8 222 3-265 51-274 (317)
310 3vq2_A TLR4, TOLL-like recepto 99.9 2.1E-26 7.3E-31 250.8 18.5 235 5-264 51-339 (606)
311 2z7x_B TOLL-like receptor 1, v 99.9 2.1E-26 7.2E-31 246.2 17.7 147 112-268 321-483 (520)
312 4g8a_A TOLL-like receptor 4; l 99.9 5.1E-26 1.8E-30 248.6 20.0 110 153-268 470-582 (635)
313 3rfs_A Internalin B, repeat mo 99.9 1.7E-26 5.7E-31 225.7 13.7 222 9-270 18-239 (272)
314 4fmz_A Internalin; leucine ric 99.9 1.1E-25 3.9E-30 227.7 20.2 238 2-268 81-326 (347)
315 2z81_A CD282 antigen, TOLL-lik 99.9 1.8E-26 6E-31 248.4 13.9 164 1-188 19-184 (549)
316 4glp_A Monocyte differentiatio 99.9 1.5E-26 5.2E-31 230.4 11.9 203 10-243 91-307 (310)
317 3m19_A Variable lymphocyte rec 99.9 4.2E-25 1.4E-29 213.1 19.0 179 36-245 16-194 (251)
318 2z63_A TOLL-like receptor 4, v 99.9 6.8E-26 2.3E-30 244.8 14.8 250 2-268 22-340 (570)
319 1h6u_A Internalin H; cell adhe 99.9 2.1E-25 7.2E-30 221.9 15.8 197 6-246 37-233 (308)
320 4fmz_A Internalin; leucine ric 99.9 9.9E-25 3.4E-29 220.7 20.5 234 5-267 61-301 (347)
321 1o6v_A Internalin A; bacterial 99.9 8.2E-25 2.8E-29 230.6 20.6 238 5-265 63-321 (466)
322 1o6v_A Internalin A; bacterial 99.9 9.3E-25 3.2E-29 230.1 20.3 225 8-265 44-277 (466)
323 3m19_A Variable lymphocyte rec 99.9 1.1E-24 3.8E-29 210.1 18.8 181 10-221 14-194 (251)
324 2xwt_C Thyrotropin receptor; s 99.9 1.6E-25 5.3E-30 214.4 12.4 207 21-264 22-237 (239)
325 4azs_A Methyltransferase WBDD; 99.9 2.7E-27 9.2E-32 254.1 -0.0 142 313-462 297-438 (569)
326 3bz5_A Internalin-J, INLJ; leu 99.9 1.4E-24 4.6E-29 227.7 20.3 220 3-263 35-264 (457)
327 3bz5_A Internalin-J, INLJ; leu 99.9 2.1E-24 7.1E-29 226.3 21.5 232 5-271 59-304 (457)
328 4glp_A Monocyte differentiatio 99.9 1.2E-25 4E-30 224.0 9.3 224 11-266 65-307 (310)
329 4ay9_X Follicle-stimulating ho 99.9 2.4E-24 8.3E-29 218.3 16.4 233 1-267 23-259 (350)
330 1h6u_A Internalin H; cell adhe 99.9 4.2E-24 1.4E-28 212.5 15.5 212 12-268 21-232 (308)
331 3g06_A SSPH2 (leucine-rich rep 99.9 8.7E-23 3E-27 220.6 22.7 220 2-266 55-297 (622)
332 3goz_A Leucine-rich repeat-con 99.9 2E-25 6.8E-30 227.3 1.6 248 3-266 15-297 (362)
333 2ca6_A RAN GTPase-activating p 99.9 9.8E-26 3.4E-30 231.7 -1.3 253 2-267 24-317 (386)
334 2o6s_A Variable lymphocyte rec 99.9 2.3E-23 7.9E-28 194.8 14.0 180 13-230 10-189 (208)
335 1jl5_A Outer protein YOPM; leu 99.9 2.4E-22 8E-27 210.5 21.1 213 10-267 131-371 (454)
336 2o6s_A Variable lymphocyte rec 99.9 1.1E-22 3.9E-27 190.1 16.6 169 2-207 22-190 (208)
337 3cvr_A Invasion plasmid antige 99.9 3.8E-23 1.3E-27 220.8 14.9 182 11-248 60-248 (571)
338 1jl5_A Outer protein YOPM; leu 99.9 4.9E-23 1.7E-27 215.7 13.6 218 2-265 26-269 (454)
339 2ca6_A RAN GTPase-activating p 99.9 1.8E-24 6E-29 222.3 0.2 233 3-246 53-319 (386)
340 3g06_A SSPH2 (leucine-rich rep 99.9 5.8E-22 2E-26 214.2 19.8 204 8-248 79-302 (622)
341 4ay9_X Follicle-stimulating ho 99.9 1.7E-22 5.9E-27 204.6 14.4 217 13-264 12-234 (350)
342 1h6t_A Internalin B; cell adhe 99.9 1E-22 3.5E-27 200.7 11.6 187 14-244 28-214 (291)
343 2xot_A Amphoterin-induced prot 99.9 2.5E-22 8.5E-27 204.3 14.0 177 37-244 21-203 (361)
344 1h6t_A Internalin B; cell adhe 99.9 2.8E-22 9.5E-27 197.6 12.3 176 6-223 42-217 (291)
345 2v9t_B SLIT homolog 2 protein 99.9 1.7E-21 5.8E-26 183.8 15.5 127 37-188 14-140 (220)
346 2v9t_B SLIT homolog 2 protein 99.9 2E-21 6.8E-26 183.3 15.4 152 13-189 14-165 (220)
347 1m9s_A Internalin B; cell inva 99.9 3.2E-22 1.1E-26 216.0 11.3 189 12-244 23-211 (605)
348 2v70_A SLIT-2, SLIT homolog 2 99.9 2.3E-21 8E-26 182.8 15.5 152 37-219 14-166 (220)
349 2v70_A SLIT-2, SLIT homolog 2 99.9 7.1E-22 2.4E-26 186.4 11.8 157 64-246 13-169 (220)
350 2xot_A Amphoterin-induced prot 99.9 8E-22 2.7E-26 200.5 12.9 176 13-219 21-202 (361)
351 2ast_B S-phase kinase-associat 99.9 6.2E-23 2.1E-27 206.5 3.4 101 12-125 49-152 (336)
352 3goz_A Leucine-rich repeat-con 99.9 7.2E-23 2.5E-27 208.4 3.6 232 14-265 2-265 (362)
353 1m9s_A Internalin B; cell inva 99.9 1.5E-21 5E-26 210.7 14.0 183 6-230 39-221 (605)
354 3cvr_A Invasion plasmid antige 99.9 3.3E-21 1.1E-25 205.8 15.7 175 2-231 74-255 (571)
355 1z7x_W Ribonuclease inhibitor; 99.9 4.2E-24 1.4E-28 224.7 -7.4 249 11-266 86-383 (461)
356 3e6j_A Variable lymphocyte rec 99.8 1.1E-20 3.7E-25 179.4 15.9 152 37-244 22-173 (229)
357 2ast_B S-phase kinase-associat 99.8 1.5E-22 5E-27 203.8 2.9 235 6-270 64-310 (336)
358 3e6j_A Variable lymphocyte rec 99.8 1.7E-20 5.9E-25 178.0 16.8 153 88-268 21-174 (229)
359 1z7x_W Ribonuclease inhibitor; 99.8 2.2E-23 7.4E-28 219.2 -5.2 122 6-131 24-158 (461)
360 1xeu_A Internalin C; cellular 99.8 1.1E-21 3.8E-26 190.3 6.2 171 8-221 17-187 (263)
361 1dce_A Protein (RAB geranylger 99.8 1.7E-23 5.8E-28 224.5 -7.4 190 31-249 346-552 (567)
362 1xeu_A Internalin C; cellular 99.8 2.4E-21 8.2E-26 187.9 6.3 172 32-246 17-188 (263)
363 4ezg_A Putative uncharacterize 99.8 2.9E-20 9.9E-25 172.2 11.3 153 31-219 41-194 (197)
364 4ezg_A Putative uncharacterize 99.8 5.7E-20 1.9E-24 170.2 10.7 153 59-243 41-194 (197)
365 3en9_A Glycoprotease, O-sialog 99.8 4.8E-21 1.6E-25 204.4 1.1 144 296-463 386-539 (540)
366 4b8c_D Glucose-repressible alc 99.8 2.1E-20 7.3E-25 206.5 5.9 191 10-240 173-369 (727)
367 1w8a_A SLIT protein; signaling 99.8 3.3E-19 1.1E-23 164.3 10.4 86 153-244 55-140 (192)
368 1dce_A Protein (RAB geranylger 99.8 9.6E-22 3.3E-26 210.9 -8.7 198 6-237 345-567 (567)
369 4b8c_D Glucose-repressible alc 99.8 8.2E-20 2.8E-24 201.9 5.2 195 12-244 193-405 (727)
370 3sb4_A Hypothetical leucine ri 99.8 2.6E-19 8.9E-24 179.6 8.2 235 9-258 24-326 (329)
371 2ell_A Acidic leucine-rich nuc 99.8 9.4E-19 3.2E-23 157.5 10.7 133 9-165 23-160 (168)
372 3sb4_A Hypothetical leucine ri 99.8 9.5E-19 3.3E-23 175.5 11.6 202 9-237 48-328 (329)
373 1w8a_A SLIT protein; signaling 99.8 2.7E-18 9.4E-23 158.1 12.4 127 37-188 11-138 (192)
374 2wfh_A SLIT homolog 2 protein 99.8 4.9E-18 1.7E-22 156.5 13.0 107 13-132 13-119 (193)
375 2wfh_A SLIT homolog 2 protein 99.7 1.2E-17 4E-22 154.0 13.4 126 37-188 13-138 (193)
376 2ell_A Acidic leucine-rich nuc 99.7 5.5E-18 1.9E-22 152.4 10.2 133 34-188 24-159 (168)
377 2je0_A Acidic leucine-rich nuc 99.7 3.8E-18 1.3E-22 150.3 8.1 114 8-132 15-130 (149)
378 2o6r_A Variable lymphocyte rec 99.7 4.5E-17 1.5E-21 147.8 13.9 44 59-102 49-92 (177)
379 2o6r_A Variable lymphocyte rec 99.7 4E-17 1.4E-21 148.2 13.5 129 36-189 9-137 (177)
380 1a9n_A U2A', U2A'; complex (nu 99.7 1.3E-17 4.3E-22 151.4 8.4 133 30-188 15-152 (176)
381 2je0_A Acidic leucine-rich nuc 99.7 1.6E-17 5.5E-22 146.3 6.7 86 34-129 17-102 (149)
382 1a9n_A U2A', U2A'; complex (nu 99.7 3.7E-17 1.3E-21 148.3 8.2 140 5-165 14-153 (176)
383 4fdw_A Leucine rich hypothetic 99.7 5.6E-16 1.9E-20 159.0 17.2 225 4-264 130-356 (401)
384 1ds9_A Outer arm dynein; leuci 99.7 2E-19 6.7E-24 166.7 -9.0 137 7-169 15-157 (198)
385 4fdw_A Leucine rich hypothetic 99.7 1.6E-15 5.4E-20 155.7 17.3 205 4-246 152-361 (401)
386 3ogk_B Coronatine-insensitive 99.7 1.6E-18 5.4E-23 188.0 -6.1 61 205-265 462-525 (592)
387 3g39_A Variable lymphocyte rec 99.6 1.4E-15 4.8E-20 137.0 11.4 108 12-131 11-118 (170)
388 1ds9_A Outer arm dynein; leuci 99.6 2.4E-18 8.2E-23 159.3 -8.5 89 30-130 14-108 (198)
389 2r9u_A Variable lymphocyte rec 99.6 3E-15 1E-19 135.3 11.7 107 13-131 15-121 (174)
390 3g39_A Variable lymphocyte rec 99.6 3.2E-15 1.1E-19 134.6 11.8 106 36-166 11-116 (170)
391 3ogk_B Coronatine-insensitive 99.6 4E-17 1.4E-21 176.9 -2.0 42 197-238 284-326 (592)
392 2r9u_A Variable lymphocyte rec 99.6 5.2E-15 1.8E-19 133.7 11.7 104 37-165 15-118 (174)
393 1zar_A RIO2 kinase; serine kin 99.5 4.2E-15 1.4E-19 145.2 4.0 89 321-435 164-252 (282)
394 2p1m_B Transport inhibitor res 99.5 8E-16 2.7E-20 166.7 -3.2 250 7-265 153-493 (594)
395 2ifg_A High affinity nerve gro 99.5 5.3E-14 1.8E-18 141.8 9.7 107 13-131 11-119 (347)
396 2p1m_B Transport inhibitor res 99.5 2.4E-16 8.1E-21 170.8 -8.2 109 150-265 395-518 (594)
397 3un9_A NLR family member X1; l 99.5 3.9E-16 1.3E-20 158.7 -7.7 198 34-243 72-283 (372)
398 2ifg_A High affinity nerve gro 99.4 4.8E-13 1.6E-17 134.8 11.0 105 37-166 11-117 (347)
399 3un9_A NLR family member X1; l 99.4 1.3E-15 4.5E-20 154.8 -8.5 170 61-244 71-253 (372)
400 4fs7_A Uncharacterized protein 99.3 4.8E-11 1.7E-15 122.3 15.0 221 4-240 65-353 (394)
401 1zth_A RIO1 serine protein kin 99.1 4.8E-11 1.6E-15 114.8 7.6 74 331-412 141-219 (258)
402 4gt6_A Cell surface protein; l 99.1 2.2E-09 7.6E-14 109.9 16.6 110 146-265 259-369 (394)
403 4fs7_A Uncharacterized protein 99.1 8.8E-10 3E-14 112.9 13.1 210 5-240 157-376 (394)
404 2ra8_A Uncharacterized protein 99.0 3.6E-11 1.2E-15 121.1 1.3 196 28-241 133-341 (362)
405 2ra8_A Uncharacterized protein 99.0 4.5E-11 1.5E-15 120.4 1.3 186 34-244 107-321 (362)
406 1io0_A Tropomodulin; LRR prote 99.0 2.8E-11 9.7E-16 110.2 -1.3 129 27-165 29-164 (185)
407 4gt6_A Cell surface protein; l 99.0 1.2E-08 4E-13 104.4 17.5 237 4-263 57-344 (394)
408 4gyi_A RIO2 kinase; protein ki 98.9 4E-10 1.4E-14 113.3 3.2 86 317-412 164-265 (397)
409 1io0_A Tropomodulin; LRR prote 98.9 1.9E-10 6.4E-15 104.7 -1.2 123 5-128 31-164 (185)
410 4h09_A Hypothetical leucine ri 98.8 1.6E-07 5.3E-12 95.4 19.9 109 146-263 234-343 (379)
411 3rw6_A Nuclear RNA export fact 98.7 2.1E-09 7.3E-14 102.8 0.3 65 60-129 168-234 (267)
412 4h09_A Hypothetical leucine ri 98.6 5E-07 1.7E-11 91.7 13.5 195 3-231 151-357 (379)
413 3rw6_A Nuclear RNA export fact 98.6 4.5E-08 1.6E-12 93.5 5.2 112 6-121 137-257 (267)
414 3tm0_A Aminoglycoside 3'-phosp 98.3 5.7E-07 1.9E-11 86.2 6.0 88 317-410 69-212 (263)
415 1pgv_A TMD-1, tropomodulin TMD 98.3 2.3E-07 7.9E-12 84.0 1.8 94 31-125 38-136 (197)
416 1nd4_A Aminoglycoside 3'-phosp 98.2 2.4E-06 8.2E-11 81.4 7.8 82 320-410 77-213 (264)
417 3dxp_A Putative acyl-COA dehyd 98.2 4.7E-06 1.6E-10 83.8 10.0 92 317-411 97-248 (359)
418 1pgv_A TMD-1, tropomodulin TMD 98.0 1.1E-06 3.9E-11 79.4 1.3 121 7-127 38-169 (197)
419 3sg8_A APH(2'')-ID; antibiotic 97.9 2.6E-06 8.7E-11 83.6 2.4 126 332-464 90-289 (304)
420 3e4g_A ATP synthase subunit S, 97.9 2.2E-06 7.4E-11 76.1 1.6 84 34-126 61-150 (176)
421 3e4g_A ATP synthase subunit S, 97.8 7.3E-06 2.5E-10 72.7 2.4 59 62-125 61-124 (176)
422 3rfe_A Platelet glycoprotein I 97.3 0.00029 9.8E-09 59.4 6.1 36 88-128 33-68 (130)
423 3rfe_A Platelet glycoprotein I 97.3 0.00038 1.3E-08 58.6 6.3 59 37-100 11-69 (130)
424 3r70_A Aminoglycoside phosphot 97.2 0.00063 2.2E-08 66.9 8.1 78 331-411 100-237 (320)
425 2yle_A Protein spire homolog 1 97.2 0.0026 8.8E-08 57.8 10.8 102 344-461 34-135 (229)
426 4gkh_A Aminoglycoside 3'-phosp 97.0 0.001 3.4E-08 63.6 6.6 87 320-411 82-223 (272)
427 3tdw_A Gentamicin resistance p 96.8 0.0019 6.4E-08 63.1 7.4 89 320-411 74-224 (306)
428 3ats_A Putative uncharacterize 96.2 0.004 1.4E-07 62.0 5.3 32 380-411 221-252 (357)
429 3ovc_A Hygromycin-B 4-O-kinase 95.7 0.0063 2.2E-07 60.8 4.2 32 381-412 213-244 (362)
430 2q83_A YTAA protein; 2635576, 92.4 0.13 4.4E-06 50.3 5.4 31 380-410 221-251 (346)
431 3d1u_A Putative fructosamine-3 91.5 0.41 1.4E-05 45.8 7.6 29 380-410 187-215 (288)
432 3jr1_A Putative fructosamine-3 90.8 0.45 1.6E-05 46.1 7.2 27 380-407 206-232 (312)
433 3dxq_A Choline/ethanolamine ki 89.7 0.45 1.5E-05 45.7 6.1 31 380-411 172-202 (301)
434 2pyw_A Uncharacterized protein 89.3 0.31 1.1E-05 49.4 4.9 77 380-458 231-312 (420)
435 4ann_A ESSB; membrane protein, 87.4 1.5 5E-05 39.7 7.4 122 316-470 43-165 (215)
436 3csv_A Aminoglycoside phosphot 85.7 0.85 2.9E-05 44.3 5.4 33 380-412 182-218 (333)
437 2lz0_A Uncharacterized protein 85.6 0.75 2.6E-05 36.1 4.0 48 72-125 6-53 (100)
438 1zyl_A Hypothetical protein YI 83.1 1.2 4E-05 43.1 5.1 30 380-411 194-223 (328)
439 2ppq_A HSK, HK, homoserine kin 82.7 0.36 1.2E-05 46.7 1.2 31 380-410 186-216 (322)
440 3g15_A CK, chetk-alpha, cholin 80.7 0.64 2.2E-05 46.8 2.2 30 382-411 245-280 (401)
441 4ano_A ESSB; membrane protein, 77.4 4.3 0.00015 36.7 6.4 117 317-467 49-167 (219)
442 2olc_A MTR kinase, methylthior 74.1 1.3 4.6E-05 44.2 2.3 31 380-411 226-256 (397)
443 3i1a_A Spectinomycin phosphotr 72.2 1.3 4.3E-05 43.4 1.5 32 380-411 205-236 (339)
444 2qg7_A Ethanolamine kinase PV0 72.0 3.1 0.00011 42.5 4.5 17 380-396 289-305 (458)
445 3c5i_A Choline kinase; choline 71.1 1.8 6.2E-05 42.7 2.5 30 380-410 211-240 (369)
446 1nw1_A Choline kinase (49.2 KD 65.7 2.1 7.2E-05 43.4 1.6 19 380-398 248-266 (429)
447 3feg_A Choline/ethanolamine ki 62.7 3.2 0.00011 41.2 2.3 31 380-410 219-253 (379)
448 2lz0_A Uncharacterized protein 62.4 20 0.00068 27.8 6.4 37 58-95 16-52 (100)
449 3f2s_A CK, chetk-alpha, cholin 60.0 3.8 0.00013 41.0 2.3 31 380-410 243-279 (401)
450 3mes_A Choline kinase; malaria 48.1 7.2 0.00025 39.3 2.1 31 380-411 261-291 (424)
451 3f7w_A Putative fructosamine-3 45.8 6.3 0.00022 37.1 1.2 25 380-405 187-211 (288)
452 3twe_A Alpha4H; unknown functi 23.0 92 0.0032 16.8 2.8 16 528-543 3-18 (27)
No 1
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=4.4e-47 Score=374.60 Aligned_cols=256 Identities=23% Similarity=0.307 Sum_probs=187.8
Q ss_pred ccCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCcccc
Q 047800 245 EILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPV 323 (547)
Q Consensus 245 ~~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l 323 (547)
...+.|+|+.||...+.+. ++++..+....... ....|..|+. +..++ |||||++
T Consensus 42 ~~iG~G~fG~Vy~~~~~~~---vAvK~~~~~~~~~~-----------~~~~f~~E~~il~~l~----------HpNIV~l 97 (307)
T 3omv_A 42 TRIGSGSFGTVYKGKWHGD---VAVKILKVVDPTPE-----------QFQAFRNEVAVLRKTR----------HVNILLF 97 (307)
T ss_dssp EECCCCSSSEEEEEESSSE---EEEEECCCSSCCHH-----------HHHHHHHHHHHHTTCC----------CTTBCCE
T ss_pred eEEeeCCCcEEEEEEECCc---EEEEEEEecCCCHH-----------HHHHHHHHHHHHHhCC----------CCCEeeE
Confidence 4577799999998876543 34332211110000 0011566666 55555 9999999
Q ss_pred ccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCCcEEE
Q 047800 324 ATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHL 403 (547)
Q Consensus 324 ~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~~~kl 403 (547)
+|+|.++ ..++|||||++|+|.++++.....+++.+++.++.|||.||+||| +++|+||||||+|||++.++.+||
T Consensus 98 ~g~~~~~-~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki 173 (307)
T 3omv_A 98 MGYMTKD-NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKI 173 (307)
T ss_dssp EEEECSS-SCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEE
T ss_pred EEEEECC-eEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEE
Confidence 9998764 589999999999999999877668999999999999999999999 899999999999999999999999
Q ss_pred cccCCcccCCCCC--cccccccCCCCCCCCCCCCC---CCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhhhh
Q 047800 404 SDFGIAKTGEDQS--MTQTQTLATIGYMAPEYGRE---GRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVND 478 (547)
Q Consensus 404 ~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~---~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~ 478 (547)
+|||+|+...... ......+||+.|||||++.+ +.|+.++|||||||++|||+||+.||.+..............
T Consensus 174 ~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~ 253 (307)
T 3omv_A 174 GDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRG 253 (307)
T ss_dssp CCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTT
T ss_pred eeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcC
Confidence 9999998654321 22344589999999999863 458999999999999999999999997643322211111111
Q ss_pred ccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHHHH
Q 047800 479 WLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESLL 543 (547)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~~~ 543 (547)
..... . ...+..+++++.+++.+||+.||++|||+.||++.|+.+...+.
T Consensus 254 ~~~p~--------------~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lp 303 (307)
T 3omv_A 254 YASPD--------------L-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp CCCCC--------------S-TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred CCCCC--------------c-ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCC
Confidence 10000 0 01112345679999999999999999999999999998865543
No 2
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=9.2e-48 Score=380.99 Aligned_cols=261 Identities=23% Similarity=0.354 Sum_probs=196.9
Q ss_pred CCeEeCCCCccccccCCCCccCCcchhcccC-----ccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHH
Q 047800 232 LDDLDLSFNKLEGEILRGGSFGNFLVELFEG-----NKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLIL 305 (547)
Q Consensus 232 L~~l~l~~N~l~~~~~~~~~~~~l~~l~l~~-----N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 305 (547)
++.+.++..++. ...+.|+||.||+..+.+ +...+++|.-........ ...|..|+. +..+
T Consensus 20 ~~ei~~~~~~~~-~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~------------~~~f~~E~~il~~l 86 (308)
T 4gt4_A 20 LKEISLSAVRFM-EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPL------------REEFRHEAMLRARL 86 (308)
T ss_dssp CCBCCGGGEEEE-EEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-C------------HHHHHHHHHHHHHC
T ss_pred cccCCHHHCeEe-eEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHH------------HHHHHHHHHHHHhC
Confidence 344444444444 346679999999987643 223355553211110000 112667777 6677
Q ss_pred HHhhcCCCCCCCCCccccccccCccceeEEEEeccCCCChhHHhhhCC---------------CCCCHHHHHHHHHHHHH
Q 047800 306 RCRKRGKRPSNDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGN---------------CSLDIFQRLNSMIDVAL 370 (547)
Q Consensus 306 ~~~~~~~~~~~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~i~~ 370 (547)
+ |||||+++|+|.+++..++|||||++|+|.+++.... ..+++.++++++.|||+
T Consensus 87 ~----------HpNIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~ 156 (308)
T 4gt4_A 87 Q----------HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAA 156 (308)
T ss_dssp C----------CTTBCCEEEEECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHH
T ss_pred C----------CCCCCCcceEEEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHH
Confidence 7 9999999999999999999999999999999996532 35899999999999999
Q ss_pred HHHHHHccCCCCccccCCCCCcEEeCCCCcEEEcccCCcccCCCCC--cccccccCCCCCCCCCCCCCCCCCcchhHHHH
Q 047800 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQS--MTQTQTLATIGYMAPEYGREGRVSANGDVYSF 448 (547)
Q Consensus 371 ~l~~lH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~ 448 (547)
||+||| +++|+||||||+|||++.++.+||+|||+|+...... ...+...||+.|||||++.++.|+.++|||||
T Consensus 157 gl~yLH---~~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSf 233 (308)
T 4gt4_A 157 GMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSY 233 (308)
T ss_dssp HHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred HHHHHH---hCCCCCCCccccceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhH
Confidence 999999 9999999999999999999999999999998653322 22334579999999999999999999999999
Q ss_pred HHHHHHHHh-CCCCCchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCC
Q 047800 449 GIMLMKTFI-GKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRIN 527 (547)
Q Consensus 449 G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 527 (547)
||++|||+| |+.||.+....+.. ..+ ... ...+.++.+++++.+++.+||+.||++|||
T Consensus 234 Gvvl~El~t~g~~Pf~~~~~~~~~--~~i------------~~~------~~~~~p~~~~~~~~~li~~C~~~dP~~RPs 293 (308)
T 4gt4_A 234 GVVLWEVFSYGLQPYCGYSNQDVV--EMI------------RNR------QVLPCPDDCPAWVYALMIECWNEFPSRRPR 293 (308)
T ss_dssp HHHHHHHHTTTCCTTTTCCHHHHH--HHH------------HTT------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred HHHHHHHHhCCCCCCCCCCHHHHH--HHH------------HcC------CCCCCcccchHHHHHHHHHHcCCChhHCcC
Confidence 999999998 89999775433221 111 100 001112345667999999999999999999
Q ss_pred hHHHHHHHHHH
Q 047800 528 PKEIVTRLLKI 538 (547)
Q Consensus 528 ~~eil~~L~~i 538 (547)
|.||+++|+.+
T Consensus 294 ~~ei~~~L~a~ 304 (308)
T 4gt4_A 294 FKDIHSRLRAW 304 (308)
T ss_dssp HHHHHHHHHTS
T ss_pred HHHHHHHHHhc
Confidence 99999999753
No 3
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=4.6e-47 Score=374.38 Aligned_cols=252 Identities=24% Similarity=0.364 Sum_probs=190.3
Q ss_pred cccCCCCccCCcchhcccC-----ccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCC
Q 047800 244 GEILRGGSFGNFLVELFEG-----NKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSND 317 (547)
Q Consensus 244 ~~~~~~~~~~~l~~l~l~~-----N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H 317 (547)
+...+.|+|+.++.....+ ....+++|.-... +.. ....|..|+. +..++ |
T Consensus 18 ~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~----------~~~~f~~E~~il~~l~----------H 74 (299)
T 4asz_A 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDN----------ARKDFHREAELLTNLQ----------H 74 (299)
T ss_dssp EEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC---CHH----------HHHHHHHHHHHHTTCC----------C
T ss_pred eeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC---ChH----------HHHHHHHHHHHHHhCC----------C
Confidence 3456779999998876542 2233444421110 000 0111556666 55555 9
Q ss_pred CCccccccccCccceeEEEEeccCCCChhHHhhhCC------------CCCCHHHHHHHHHHHHHHHHHHHccCCCCccc
Q 047800 318 ANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGN------------CSLDIFQRLNSMIDVALALEYMHFGYSAPVIH 385 (547)
Q Consensus 318 ~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~------------~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H 385 (547)
||||+++|+|.+++..++|||||++|+|.++++..+ ..+++.+++.++.||++||+||| +++|+|
T Consensus 75 pnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiH 151 (299)
T 4asz_A 75 EHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVH 151 (299)
T ss_dssp TTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCC
T ss_pred CCCccEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccc
Confidence 999999999999999999999999999999997642 46999999999999999999999 999999
Q ss_pred cCCCCCcEEeCCCCcEEEcccCCcccCCCCCc--ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCC
Q 047800 386 CDIKANNVLLDDNMVAHLSDFGIAKTGEDQSM--TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFI-GKKPT 462 (547)
Q Consensus 386 ~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ellt-g~~p~ 462 (547)
|||||+|||++.++.+||+|||+|+....... ......||+.|||||++.+..|+.++|||||||++|||+| |+.||
T Consensus 152 RDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf 231 (299)
T 4asz_A 152 RDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPW 231 (299)
T ss_dssp SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred CccCHhhEEECCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCC
Confidence 99999999999999999999999985443221 1223468999999999999999999999999999999998 89999
Q ss_pred chhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHH
Q 047800 463 DEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIES 541 (547)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~ 541 (547)
.+....+.. ... .... ....++.+++++.+++.+||+.||++|||++||++.|+++.++
T Consensus 232 ~~~~~~~~~-~~i------------~~~~-------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 232 YQLSNNEVI-ECI------------TQGR-------VLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp TTSCHHHHH-HHH------------HHTC-------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHH-HHH------------HcCC-------CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 875433221 110 0000 0111233466799999999999999999999999999987654
No 4
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.4e-46 Score=376.06 Aligned_cols=251 Identities=24% Similarity=0.370 Sum_probs=185.8
Q ss_pred ccCCCCccCCcchhcccC-----ccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCC
Q 047800 245 EILRGGSFGNFLVELFEG-----NKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDA 318 (547)
Q Consensus 245 ~~~~~~~~~~l~~l~l~~-----N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~ 318 (547)
...+.|.|+.||...+.+ +...+++|.-... ... ....|..|+. +..++ ||
T Consensus 47 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~----------~~~~f~~E~~il~~l~----------Hp 103 (329)
T 4aoj_A 47 WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SES----------ARQDFQREAELLTMLQ----------HQ 103 (329)
T ss_dssp EEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC---SHH----------HHHHHHHHHHHHTTCC----------CT
T ss_pred EEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC---CHH----------HHHHHHHHHHHHHhCC----------CC
Confidence 345668999999876543 2333454422110 000 0111566666 55555 99
Q ss_pred CccccccccCccceeEEEEeccCCCChhHHhhhCC--------------CCCCHHHHHHHHHHHHHHHHHHHccCCCCcc
Q 047800 319 NISPVATSCSNEEFKALILEYKPHGSLEKYLYSGN--------------CSLDIFQRLNSMIDVALALEYMHFGYSAPVI 384 (547)
Q Consensus 319 nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~--------------~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~ 384 (547)
|||+++|+|.+++..++|||||++|+|.++++... ..+++.+++.++.|||.||+||| +++|+
T Consensus 104 nIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~ii 180 (329)
T 4aoj_A 104 HIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFV 180 (329)
T ss_dssp TBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCC
T ss_pred CCCcEEEEEEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCee
Confidence 99999999999999999999999999999997642 35899999999999999999999 89999
Q ss_pred ccCCCCCcEEeCCCCcEEEcccCCcccCCCCC--cccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCC
Q 047800 385 HCDIKANNVLLDDNMVAHLSDFGIAKTGEDQS--MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFI-GKKP 461 (547)
Q Consensus 385 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ellt-g~~p 461 (547)
||||||+|||++.++.+||+|||+|+...... .......||+.|||||++.+..|+.++|||||||++|||+| |+.|
T Consensus 181 HRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~P 260 (329)
T 4aoj_A 181 HRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260 (329)
T ss_dssp CSCCCGGGEEEETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred cccccHhhEEECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCC
Confidence 99999999999999999999999998654322 12334579999999999999999999999999999999998 8999
Q ss_pred CchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHH
Q 047800 462 TDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIES 541 (547)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~ 541 (547)
|......+.. .. +... .+...++.+++++.+++.+||+.||++|||++||++.|+.+.+.
T Consensus 261 f~~~~~~~~~-~~------------i~~g-------~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 261 WYQLSNTEAI-DC------------ITQG-------RELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp TCSSCHHHHH-HH------------HHHT-------CCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred CCCCCHHHHH-HH------------HHcC-------CCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 9765433211 11 0000 00111233466799999999999999999999999999988764
No 5
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=2.6e-45 Score=366.57 Aligned_cols=242 Identities=19% Similarity=0.224 Sum_probs=189.7
Q ss_pred CCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCcccccc
Q 047800 247 LRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPVAT 325 (547)
Q Consensus 247 ~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l~~ 325 (547)
.+.|+|+.|+......+...+++|........ .. ..+..|+. +..++ |||||++++
T Consensus 82 iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~-~~------------~~~~~Ei~il~~l~----------HpnIV~l~~ 138 (346)
T 4fih_A 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ-RR------------ELLFNEVVIMRDYQ----------HENVVEMYN 138 (346)
T ss_dssp EEECSSCEEEEEEETTTCCEEEEEEEEGGGCS-SG------------GGGHHHHHHHHHCC----------CTTBCCEEE
T ss_pred eecCcCeEEEEEEECCCCCEEEEEEEecCchh-HH------------HHHHHHHHHHHhCC----------CCCCCcEEE
Confidence 45688999998877666666666532111000 01 01445665 66666 999999999
Q ss_pred ccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCCcEEEcc
Q 047800 326 SCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSD 405 (547)
Q Consensus 326 ~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~~~kl~D 405 (547)
++.+++..|||||||++|+|.+++... .+++.++..++.||+.||+||| +++|+||||||+|||++.++.+||+|
T Consensus 139 ~~~~~~~~~ivmEy~~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~D 213 (346)
T 4fih_A 139 SYLVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSD 213 (346)
T ss_dssp EEEETTEEEEEECCCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECC
T ss_pred EEEECCEEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEec
Confidence 999999999999999999999999875 4999999999999999999999 99999999999999999999999999
Q ss_pred cCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhhhhccCchhh
Q 047800 406 FGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPISIM 485 (547)
Q Consensus 406 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 485 (547)
||+|+............+||+.|||||++.+..|+.++||||+||++|||++|++||......+. +........
T Consensus 214 FGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~-~~~i~~~~~----- 287 (346)
T 4fih_A 214 FGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA-MKMIRDNLP----- 287 (346)
T ss_dssp CTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHSSC-----
T ss_pred CcCceecCCCCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH-HHHHHcCCC-----
Confidence 99998766554445567899999999999999999999999999999999999999976432221 111111000
Q ss_pred hhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 486 EVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
+ .......+++++.+|+.+||..||++|||++|+++.
T Consensus 288 ----~--------~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 288 ----P--------RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp ----C--------CCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ----C--------CCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0 001112345678999999999999999999999763
No 6
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.5e-45 Score=364.07 Aligned_cols=225 Identities=17% Similarity=0.222 Sum_probs=163.0
Q ss_pred CCCCCccccccccCccc----eeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHcc-----CCCCccc
Q 047800 315 SNDANISPVATSCSNEE----FKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFG-----YSAPVIH 385 (547)
Q Consensus 315 ~~H~nIv~l~~~~~~~~----~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-----~~~~i~H 385 (547)
.+|||||+++|+|.+++ ..+||||||++|+|.++++.. .+++.++.+++.|++.||+|||.. ..++|+|
T Consensus 54 l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiH 131 (303)
T 3hmm_A 54 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAH 131 (303)
T ss_dssp CCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEEC
T ss_pred CCCCCCCcEEEEEEecCCCceEEEEEecCCCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEee
Confidence 34999999999998663 579999999999999999876 499999999999999999999921 1239999
Q ss_pred cCCCCCcEEeCCCCcEEEcccCCcccCCCCCc----ccccccCCCCCCCCCCCCCC------CCCcchhHHHHHHHHHHH
Q 047800 386 CDIKANNVLLDDNMVAHLSDFGIAKTGEDQSM----TQTQTLATIGYMAPEYGREG------RVSANGDVYSFGIMLMKT 455 (547)
Q Consensus 386 ~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~~------~~~~~sDv~s~G~il~el 455 (547)
|||||+|||++.++.+||+|||+|+....... .....+||+.|||||++.+. .++.++|||||||++|||
T Consensus 132 RDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El 211 (303)
T 3hmm_A 132 RDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211 (303)
T ss_dssp SCCCGGGEEECTTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCcccEEECCCCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHH
Confidence 99999999999999999999999986543221 12234799999999998764 367899999999999999
Q ss_pred HhCCCCCchhhhhhhhhhhhhhhccC-chhhh-hhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHH
Q 047800 456 FIGKKPTDEIFNEEMTLKHWVNDWLP-ISIME-VIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVT 533 (547)
Q Consensus 456 ltg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~ 533 (547)
+||.+||............+...... ..+.. +.+.......+. .....++...+.+++.+||+.||++||||.||++
T Consensus 212 ~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~-~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~ 290 (303)
T 3hmm_A 212 ARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPN-RWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290 (303)
T ss_dssp HHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCG-GGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred HHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCc-cccchHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence 99998875533222111111100000 01111 111111111111 1112234667899999999999999999999999
Q ss_pred HHHHHHHHH
Q 047800 534 RLLKIIESL 542 (547)
Q Consensus 534 ~L~~i~~~~ 542 (547)
+|+++.++.
T Consensus 291 ~L~~l~~~~ 299 (303)
T 3hmm_A 291 TLSQLSQQE 299 (303)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHHHc
Confidence 999987653
No 7
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.9e-45 Score=366.74 Aligned_cols=246 Identities=20% Similarity=0.251 Sum_probs=184.4
Q ss_pred ccCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCcccc
Q 047800 245 EILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPV 323 (547)
Q Consensus 245 ~~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l 323 (547)
...+.|+|+.|+......+...+++|.-....... . ...-+..|+. +..++ |||||++
T Consensus 30 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~-~----------~~~~~~~E~~il~~l~----------HpnIV~~ 88 (350)
T 4b9d_A 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSS-K----------EREESRREVAVLANMK----------HPNIVQY 88 (350)
T ss_dssp EEC------CEEEEEETTTCCEEEEEEEECTTSCH-H----------HHHHHHHHHHHHHHCC----------CTTBCCE
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCH-H----------HHHHHHHHHHHHHHCC----------CCCCCcE
Confidence 35677999999987765555556655321110000 0 0011555666 66666 9999999
Q ss_pred ccccCccceeEEEEeccCCCChhHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCCcEE
Q 047800 324 ATSCSNEEFKALILEYKPHGSLEKYLYSGN-CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAH 402 (547)
Q Consensus 324 ~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~~~k 402 (547)
++++.+++..|+|||||+||+|.+++...+ ..+++.+++.++.||+.||+||| +++|+||||||+|||++.++.+|
T Consensus 89 ~~~~~~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vK 165 (350)
T 4b9d_A 89 RESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQ 165 (350)
T ss_dssp EEEEEETTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEE
T ss_pred EEEEEECCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEE
Confidence 999999999999999999999999997643 45799999999999999999999 99999999999999999999999
Q ss_pred EcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhhhhccCc
Q 047800 403 LSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPI 482 (547)
Q Consensus 403 l~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 482 (547)
|+|||+|+............+||+.|||||++.+..|+.++||||+||++|||++|+.||......+... +.
T Consensus 166 l~DFGla~~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~-~i------- 237 (350)
T 4b9d_A 166 LGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVL-KI------- 237 (350)
T ss_dssp ECSTTEESCCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH-HH-------
T ss_pred EcccccceeecCCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHH-HH-------
Confidence 9999999876543323344579999999999999999999999999999999999999997643322211 11
Q ss_pred hhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 483 SIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
...... ..+..+++++.+|+.+||+.||++|||++|+++.
T Consensus 238 -----~~~~~~-------~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 238 -----ISGSFP-------PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp -----HHTCCC-------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -----HcCCCC-------CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 111000 0112235678999999999999999999999864
No 8
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=2e-44 Score=353.10 Aligned_cols=243 Identities=19% Similarity=0.255 Sum_probs=180.6
Q ss_pred cCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCccccc
Q 047800 246 ILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPVA 324 (547)
Q Consensus 246 ~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l~ 324 (547)
..+.|+|+.|+......+...++.+......... . ....|..|+. +..++ |||||+++
T Consensus 33 ~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~-~----------~~~~~~~E~~il~~l~----------HpnIV~~~ 91 (290)
T 3fpq_A 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTK-S----------ERQRFKEEAEMLKGLQ----------HPNIVRFY 91 (290)
T ss_dssp EEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCH-H----------HHHHHHHHHHHHHTCC----------CTTBCCEE
T ss_pred EEecCcCcEEEEEEECCCCeEEEEEEEchhhCCH-H----------HHHHHHHHHHHHHhCC----------CCCCCcEE
Confidence 3566899999987766665555554211100000 0 0011555665 55555 99999999
Q ss_pred cccCc----cceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCC--ccccCCCCCcEEeCC-
Q 047800 325 TSCSN----EEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAP--VIHCDIKANNVLLDD- 397 (547)
Q Consensus 325 ~~~~~----~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~--i~H~dlkp~Nill~~- 397 (547)
++|.+ +...++|||||++|+|.+++++.. .+++..+..++.||+.||+||| +++ |+||||||+|||++.
T Consensus 92 ~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~ 167 (290)
T 3fpq_A 92 DSWESTVKGKKCIVLVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGP 167 (290)
T ss_dssp EEEEEEETTEEEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESST
T ss_pred EEEeeccCCCcEEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECC
Confidence 99864 356899999999999999998754 6999999999999999999999 777 999999999999984
Q ss_pred CCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhhh
Q 047800 398 NMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVN 477 (547)
Q Consensus 398 ~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~ 477 (547)
++.+||+|||+|+..... .....+||+.|||||++.+ .|+.++|||||||++|||+||+.||.+.............
T Consensus 168 ~g~vKl~DFGla~~~~~~--~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~ 244 (290)
T 3fpq_A 168 TGSVKIGDLGLATLKRAS--FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTS 244 (290)
T ss_dssp TSCEEECCTTGGGGCCTT--SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTT
T ss_pred CCCEEEEeCcCCEeCCCC--ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHc
Confidence 789999999999864432 2344589999999999865 6999999999999999999999999754332221111111
Q ss_pred hccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 478 DWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
...+ ...+..+++++.+++.+||+.||++|||++|+++.
T Consensus 245 ~~~~------------------~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 245 GVKP------------------ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp TCCC------------------GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCCC------------------CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1000 00111224568999999999999999999999763
No 9
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=2.4e-45 Score=370.06 Aligned_cols=256 Identities=22% Similarity=0.317 Sum_probs=190.9
Q ss_pred ccCCCCccCCcchhcccCcccc-----ccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCC
Q 047800 245 EILRGGSFGNFLVELFEGNKLL-----YGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDA 318 (547)
Q Consensus 245 ~~~~~~~~~~l~~l~l~~N~~~-----c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~ 318 (547)
...+.|+|+.|+.....+..-. ++++.-... ... .-...|..|+. +..++ +||
T Consensus 70 ~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~--~~~----------~~~~~~~~E~~il~~l~---------hhp 128 (353)
T 4ase_A 70 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATH----------SEHRALMSELKILIHIG---------HHL 128 (353)
T ss_dssp EEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTT--CCH----------HHHHHHHHHHHHHHHHC---------CCT
T ss_pred eEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccc--cCh----------HHHHHHHHHHHHHHHcC---------CCC
Confidence 4566799999998766553321 222211000 000 00112556666 66665 259
Q ss_pred CccccccccCcc-ceeEEEEeccCCCChhHHhhhC---------------CCCCCHHHHHHHHHHHHHHHHHHHccCCCC
Q 047800 319 NISPVATSCSNE-EFKALILEYKPHGSLEKYLYSG---------------NCSLDIFQRLNSMIDVALALEYMHFGYSAP 382 (547)
Q Consensus 319 nIv~l~~~~~~~-~~~~lv~ey~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ 382 (547)
|||+++|+|.+. +..++|||||++|+|.++++.. ...+++.+++.++.|||+||+||| +++
T Consensus 129 nIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~ 205 (353)
T 4ase_A 129 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRK 205 (353)
T ss_dssp TBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTT
T ss_pred cEEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCC
Confidence 999999999765 5689999999999999999753 234899999999999999999999 999
Q ss_pred ccccCCCCCcEEeCCCCcEEEcccCCcccCCCCCc--ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHh-CC
Q 047800 383 VIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSM--TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFI-GK 459 (547)
Q Consensus 383 i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ellt-g~ 459 (547)
|+||||||+|||++.++.+||+|||+|+....... ......||+.|||||++.+..|+.++|||||||++|||+| |+
T Consensus 206 iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~ 285 (353)
T 4ase_A 206 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA 285 (353)
T ss_dssp CCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSC
T ss_pred eecCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCC
Confidence 99999999999999999999999999986543322 2334578999999999999999999999999999999998 89
Q ss_pred CCCchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHH
Q 047800 460 KPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKII 539 (547)
Q Consensus 460 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~ 539 (547)
.||.+....+..... +.... +...++.+++++.+++.+||+.||++|||+.||++.|+.++
T Consensus 286 ~Pf~~~~~~~~~~~~-------------i~~g~------~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~ll 346 (353)
T 4ase_A 286 SPYPGVKIDEEFCRR-------------LKEGT------RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 346 (353)
T ss_dssp CSSTTCCCSHHHHHH-------------HHHTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHH-------------HHcCC------CCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 999764322211111 11110 11112334567999999999999999999999999999988
Q ss_pred HHHH
Q 047800 540 ESLL 543 (547)
Q Consensus 540 ~~~~ 543 (547)
++-.
T Consensus 347 q~~~ 350 (353)
T 4ase_A 347 QANA 350 (353)
T ss_dssp HHTC
T ss_pred HHhh
Confidence 7643
No 10
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.9e-44 Score=357.96 Aligned_cols=248 Identities=20% Similarity=0.211 Sum_probs=188.2
Q ss_pred cCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHHHHHHHHhhcCCCCCCCCCcccccc
Q 047800 246 ILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVILLILRCRKRGKRPSNDANISPVAT 325 (547)
Q Consensus 246 ~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~nIv~l~~ 325 (547)
..+.|+|+.|+......+...|++|..... .....|+. ..+..+|||||++++
T Consensus 65 ~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~------------------~~~~~E~~---------il~~l~HpnIV~l~~ 117 (336)
T 4g3f_A 65 RVGRGSFGEVHRMKDKQTGFQCAVKKVRLE------------------VFRVEELV---------ACAGLSSPRIVPLYG 117 (336)
T ss_dssp EEEEETTEEEEEEEETTTCCEEEEEEEETT------------------TCCTHHHH---------TTTTCCCTTBCCEEE
T ss_pred EeccCCCeEEEEEEECCCCCEEEEEEECHH------------------HhHHHHHH---------HHHhCCCCCCCcEEE
Confidence 356688999988776655555665522100 00112333 222345999999999
Q ss_pred ccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCC-cEEEc
Q 047800 326 SCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNM-VAHLS 404 (547)
Q Consensus 326 ~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~-~~kl~ 404 (547)
++.+++..|+|||||+||+|.+++++.+ .+++.++..++.||+.||+||| +++|+||||||+|||++.++ .+||+
T Consensus 118 ~~~~~~~~~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~ 193 (336)
T 4g3f_A 118 AVREGPWVNIFMELLEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALC 193 (336)
T ss_dssp EEEETTEEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEEC
T ss_pred EEEECCEEEEEEeccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEe
Confidence 9999999999999999999999998754 6999999999999999999999 99999999999999999987 69999
Q ss_pred ccCCcccCCCCCc-----ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhhhhc
Q 047800 405 DFGIAKTGEDQSM-----TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDW 479 (547)
Q Consensus 405 Dfg~a~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~ 479 (547)
|||+|+....... .....+||+.|||||++.+..|+.++||||+||++|||++|++||.......... ..
T Consensus 194 DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~-~i---- 268 (336)
T 4g3f_A 194 DFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCL-KI---- 268 (336)
T ss_dssp CCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHH-HH----
T ss_pred eCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHH-HH----
Confidence 9999986543321 1223479999999999999999999999999999999999999997643322211 11
Q ss_pred cCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHHH
Q 047800 480 LPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESL 542 (547)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~~ 542 (547)
.... ... ...++.+++++.+++.+||+.||++|||+.|+++.|.+..++.
T Consensus 269 --------~~~~----~~~-~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~ 318 (336)
T 4g3f_A 269 --------ASEP----PPI-REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEV 318 (336)
T ss_dssp --------HHSC----CGG-GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred --------HcCC----CCc-hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhh
Confidence 1100 000 0112334667999999999999999999999999998877653
No 11
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=3.3e-44 Score=367.31 Aligned_cols=243 Identities=19% Similarity=0.219 Sum_probs=189.9
Q ss_pred cCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCccccc
Q 047800 246 ILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPVA 324 (547)
Q Consensus 246 ~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l~ 324 (547)
..|.|+|+.|+......+...+++|........ .. ..+..|+. +..++ |||||+++
T Consensus 158 ~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~-~~------------~~~~~Ei~il~~l~----------HpnIV~l~ 214 (423)
T 4fie_A 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ-RR------------ELLFNEVVIMRDYQ----------HENVVEMY 214 (423)
T ss_dssp EEEECSSCEEEEEEETTTCCEEEEEEEESTTCS-SG------------GGHHHHHHHHHHCC----------CTTBCCEE
T ss_pred EeccCcCcEEEEEEECCCCCEEEEEEEeccchh-HH------------HHHHHHHHHHHhCC----------CCCCCceE
Confidence 345688999998877666666666532111000 01 11455666 66666 99999999
Q ss_pred cccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCCcEEEc
Q 047800 325 TSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLS 404 (547)
Q Consensus 325 ~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~~~kl~ 404 (547)
+++.+++..|+|||||+||+|.++++.. .+++.++..++.||+.||+||| +++|+||||||+|||++.++.+||+
T Consensus 215 ~~~~~~~~~~iVmEy~~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~ 289 (423)
T 4fie_A 215 NSYLVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLS 289 (423)
T ss_dssp EEEEETTEEEEEEECCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEEC
T ss_pred EEEEECCEEEEEEeCCCCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEe
Confidence 9999999999999999999999999875 4999999999999999999999 9999999999999999999999999
Q ss_pred ccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhhhhccCchh
Q 047800 405 DFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPISI 484 (547)
Q Consensus 405 Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 484 (547)
|||+|+............+||+.|||||++.+..|+.++||||+||++|||++|++||.+....+. +........
T Consensus 290 DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~-~~~i~~~~~---- 364 (423)
T 4fie_A 290 DFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA-MKMIRDNLP---- 364 (423)
T ss_dssp CCTTCEECCSSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHSCC----
T ss_pred cCccceECCCCCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH-HHHHHcCCC----
Confidence 999998766554445566899999999999999999999999999999999999999976432221 111111000
Q ss_pred hhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 485 MEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
+. ......+++++.+|+.+||..||++|||++|+++.
T Consensus 365 -----~~--------~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 365 -----PR--------LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp -----CC--------CSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -----CC--------CcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 00 00112235678999999999999999999999763
No 12
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.7e-43 Score=343.49 Aligned_cols=243 Identities=19% Similarity=0.262 Sum_probs=173.2
Q ss_pred ccCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCcccc
Q 047800 245 EILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPV 323 (547)
Q Consensus 245 ~~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l 323 (547)
...+.|+|+.++...-..+...++.|.-......... ...-+..|+. +..++ |||||++
T Consensus 19 ~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~----------~~~~~~~Ei~il~~l~----------HpnIv~~ 78 (275)
T 3hyh_A 19 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSD----------MQGRIEREISYLRLLR----------HPHIIKL 78 (275)
T ss_dssp EEEEC---CCEEEEECTTTCCEEEEEEEECC----------------CHHHHHHHHHHHHHCC----------CTTBCCE
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHH----------HHHHHHHHHHHHHHCC----------CCCCCeE
Confidence 3456688999988766555555665532111000000 0011555665 65666 9999999
Q ss_pred ccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCCcEEE
Q 047800 324 ATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHL 403 (547)
Q Consensus 324 ~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~~~kl 403 (547)
++++.+++..|+||||| +|+|.+++.+.+ .+++.++..++.|++.||+||| +++|+||||||+|||++.++.+||
T Consensus 79 ~~~~~~~~~~~ivmEy~-~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl 153 (275)
T 3hyh_A 79 YDVIKSKDEIIMVIEYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKI 153 (275)
T ss_dssp EEEEECSSEEEEEEECC-CEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEE
T ss_pred EEEEEECCEEEEEEeCC-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEE
Confidence 99999999999999999 679999998765 6999999999999999999999 999999999999999999999999
Q ss_pred cccCCcccCCCCCcccccccCCCCCCCCCCCCCCCC-CcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhhhhccCc
Q 047800 404 SDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPI 482 (547)
Q Consensus 404 ~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 482 (547)
+|||+|+...... .....+||+.|||||++.+..+ +.++||||+||++|||++|+.||........ ....
T Consensus 154 ~DFGla~~~~~~~-~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~-~~~i------- 224 (275)
T 3hyh_A 154 ADFGLSNIMTDGN-FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVL-FKNI------- 224 (275)
T ss_dssp CCSSCC----------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHH-------
T ss_pred eecCCCeecCCCC-ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHH-HHHH-------
Confidence 9999998655433 2334589999999999998876 5799999999999999999999976432221 1111
Q ss_pred hhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 483 SIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
.... . ..+..+++++.+++.+||+.||++|||++|+++.
T Consensus 225 -----~~~~-~-------~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 225 -----SNGV-Y-------TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp -----HHTC-C-------CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred -----HcCC-C-------CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 0000 0 0112235678999999999999999999999874
No 13
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=2.9e-44 Score=353.73 Aligned_cols=243 Identities=21% Similarity=0.269 Sum_probs=183.5
Q ss_pred ccCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCcccc
Q 047800 245 EILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPV 323 (547)
Q Consensus 245 ~~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l 323 (547)
...+.|+|+.|+...-..+...++.|.-......... ....+..|+. +..+ +|||||++
T Consensus 38 ~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~----------~~~~~~~E~~il~~l----------~HpnIv~l 97 (311)
T 4aw0_A 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN----------KVPYVTRERDVMSRL----------DHPFFVKL 97 (311)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTT----------CHHHHHHHHHHHTTC----------CCTTBCCE
T ss_pred EEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHH----------HHHHHHHHHHHHHhC----------CCCCCCeE
Confidence 3456688999888765555544555422100000000 0001344444 4444 49999999
Q ss_pred ccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCCcEEE
Q 047800 324 ATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHL 403 (547)
Q Consensus 324 ~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~~~kl 403 (547)
++++.+++..|+|||||+||+|.+++.+.+ .+++.++..++.||+.||+||| +++|+||||||+|||++.++.+||
T Consensus 98 ~~~~~~~~~~yivmEy~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl 173 (311)
T 4aw0_A 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQI 173 (311)
T ss_dssp EEEEECSSEEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEE
T ss_pred EEEEEeCCEEEEEEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEE
Confidence 999999999999999999999999998754 6999999999999999999999 999999999999999999999999
Q ss_pred cccCCcccCCCCC--cccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhhhhccC
Q 047800 404 SDFGIAKTGEDQS--MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWLP 481 (547)
Q Consensus 404 ~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 481 (547)
+|||+|+...... ......+||+.|||||++.+..|+.++||||+||++|||++|+.||......+. ...
T Consensus 174 ~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~-~~~------- 245 (311)
T 4aw0_A 174 TDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLI-FAK------- 245 (311)
T ss_dssp CCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHH-------
T ss_pred EEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHH-------
Confidence 9999998764332 223456899999999999999999999999999999999999999976433221 111
Q ss_pred chhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHH
Q 047800 482 ISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIV 532 (547)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil 532 (547)
+..... ..++.+++++.+|+.+||..||++|||++|++
T Consensus 246 -----i~~~~~--------~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 246 -----IIKLEY--------DFPEKFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp -----HHHTCC--------CCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred -----HHcCCC--------CCCcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 111100 01122356789999999999999999999864
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=6.1e-43 Score=344.23 Aligned_cols=197 Identities=24% Similarity=0.299 Sum_probs=161.1
Q ss_pred CCCCCCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCC
Q 047800 312 KRPSNDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKAN 391 (547)
Q Consensus 312 ~~~~~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~ 391 (547)
-+..+|||||++++++.+++..|+|||||+||+|.+++.+.+ .+++.++..++.|++.||+||| +++|+||||||+
T Consensus 80 l~~l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~ 155 (304)
T 3ubd_A 80 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPE 155 (304)
T ss_dssp CCCCCCTTEECEEEEEEETTEEEEEECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGG
T ss_pred HHHCCCCCCCeEEEEEEECCEEEEEEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHH
Confidence 334569999999999999999999999999999999998754 6999999999999999999999 999999999999
Q ss_pred cEEeCCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhh
Q 047800 392 NVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMT 471 (547)
Q Consensus 392 Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~ 471 (547)
|||++.++.+||+|||+|+............+||+.|||||++.+..|+.++||||+||++|||++|+.||.+....+..
T Consensus 156 NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~ 235 (304)
T 3ubd_A 156 NILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETM 235 (304)
T ss_dssp GEEECTTSCEEEESSEEEEC-----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred HeEEcCCCCEEecccccceeccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHH
Confidence 99999999999999999986554444445568999999999999999999999999999999999999999764332211
Q ss_pred hhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCCh-----HHHHH
Q 047800 472 LKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINP-----KEIVT 533 (547)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~-----~eil~ 533 (547)
.. +..... ..+..+++++.+++.+||+.||++|||+ +|+++
T Consensus 236 -~~------------i~~~~~--------~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 236 -TM------------ILKAKL--------GMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp -HH------------HHHCCC--------CCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred -HH------------HHcCCC--------CCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 11 111100 0112245678999999999999999985 56654
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2.2e-41 Score=334.28 Aligned_cols=240 Identities=19% Similarity=0.228 Sum_probs=164.9
Q ss_pred CCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCcccccc
Q 047800 247 LRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPVAT 325 (547)
Q Consensus 247 ~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l~~ 325 (547)
.+.|+|+.|+...-..+...+++|.-... .... ...-+..|+. +..++ |||||++++
T Consensus 13 lG~G~fg~V~~a~~~~~~~~vAiK~i~~~--~~~~----------~~~~~~~E~~il~~l~----------HpnIV~~~~ 70 (299)
T 4g31_A 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLP--NREL----------AREKVMREVKALAKLE----------HPGIVRYFN 70 (299)
T ss_dssp EEECC--EEEEEEETTTCCEEEEEEEEEC--SSHH----------HHHHHHHHHHHHTTCC----------CTTBCCEEE
T ss_pred EecCCCeEEEEEEECCCCCEEEEEEEecc--CCHH----------HHHHHHHHHHHHHhCC----------CCCCCeEEE
Confidence 45588999988765544444554421100 0000 0011444554 44444 999999999
Q ss_pred ccCccc------------eeEEEEeccCCCChhHHhhhCC--CCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCC
Q 047800 326 SCSNEE------------FKALILEYKPHGSLEKYLYSGN--CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKAN 391 (547)
Q Consensus 326 ~~~~~~------------~~~lv~ey~~~gsL~~~l~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~ 391 (547)
++.+.+ ..|+|||||++|+|.+++.... ...++..++.++.|++.||+||| +++|+||||||+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~ 147 (299)
T 4g31_A 71 AWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPS 147 (299)
T ss_dssp EEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGG
T ss_pred EEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHH
Confidence 986543 3689999999999999998754 23556778999999999999999 999999999999
Q ss_pred cEEeCCCCcEEEcccCCcccCCCCCc------------ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCC
Q 047800 392 NVLLDDNMVAHLSDFGIAKTGEDQSM------------TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGK 459 (547)
Q Consensus 392 Nill~~~~~~kl~Dfg~a~~~~~~~~------------~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~ 459 (547)
|||++.++.+||+|||+|+....... ..+..+||+.|||||++.+..|+.++||||+||++|||++
T Consensus 148 NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~-- 225 (299)
T 4g31_A 148 NIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY-- 225 (299)
T ss_dssp GEEECTTCCEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS--
T ss_pred HeEECCCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc--
Confidence 99999999999999999986543221 1223479999999999999999999999999999999996
Q ss_pred CCCchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHH
Q 047800 460 KPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVT 533 (547)
Q Consensus 460 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~ 533 (547)
||....+....+....... .+ .......+...+++.+||+.||++|||+.|+++
T Consensus 226 -Pf~~~~~~~~~~~~~~~~~---------------~p----~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 226 -PFSTQMERVRTLTDVRNLK---------------FP----PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp -CCSSHHHHHHHHHHHHTTC---------------CC----HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -CCCCccHHHHHHHHHhcCC---------------CC----CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 7764322111111110000 00 011223455788999999999999999999986
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.1e-39 Score=331.03 Aligned_cols=261 Identities=18% Similarity=0.162 Sum_probs=181.3
Q ss_pred ccCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCcccc
Q 047800 245 EILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPV 323 (547)
Q Consensus 245 ~~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l 323 (547)
...|.|+||.|+......+.-.+++|.-........ ...-+..|+. +..++ |||||++
T Consensus 60 ~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~-----------~~~~~~~Ei~il~~l~----------HpnIv~l 118 (398)
T 4b99_A 60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVT-----------NAKRTLRELKILKHFK----------HDNIIAI 118 (398)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHH-----------HHHHHHHHHHHHHHCC----------CTTBCCE
T ss_pred EEEecccCeEEEEEEECCCCCEEEEEEECccccchH-----------HHHHHHHHHHHHHhcC----------CCCcceE
Confidence 345668999998877665555566653211100000 0011445555 55556 9999999
Q ss_pred ccccCc------cceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCC
Q 047800 324 ATSCSN------EEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDD 397 (547)
Q Consensus 324 ~~~~~~------~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~ 397 (547)
++++.. .+..|+|||||+ |+|.+++...+ .+++.++..++.||+.||+||| +++|+||||||+|||++.
T Consensus 119 ~~~~~~~~~~~~~~~~~ivmE~~~-g~L~~~i~~~~-~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~ 193 (398)
T 4b99_A 119 KDILRPTVPYGEFKSVYVVLDLME-SDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNE 193 (398)
T ss_dssp EEECCCSSCTTTCCCEEEEEECCS-EEHHHHHTSSS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECT
T ss_pred eeeeecccccccCCEEEEEEeCCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCC
Confidence 998753 367899999995 68999998754 7999999999999999999999 999999999999999999
Q ss_pred CCcEEEcccCCcccCCCC----CcccccccCCCCCCCCCCCCCCC-CCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhh
Q 047800 398 NMVAHLSDFGIAKTGEDQ----SMTQTQTLATIGYMAPEYGREGR-VSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTL 472 (547)
Q Consensus 398 ~~~~kl~Dfg~a~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~ 472 (547)
++.+||+|||+|+..... .......+||+.|||||++.+.. ++.++||||+||++|||++|++||.+....+. +
T Consensus 194 ~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~-l 272 (398)
T 4b99_A 194 NCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQ-L 272 (398)
T ss_dssp TCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHH-H
T ss_pred CCCEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHH-H
Confidence 999999999999865332 12234458999999999988764 69999999999999999999999976443222 1
Q ss_pred hhhhhh-ccCc-hh---------hhhhhhhhccchhhhh-hcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHH
Q 047800 473 KHWVND-WLPI-SI---------MEVIDANLLSREDIHF-VAKEQFMSFVFNLAMECTVESPEQRINPKEIVT 533 (547)
Q Consensus 473 ~~~~~~-~~~~-~~---------~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~ 533 (547)
...... ..+. .. ...+.. ......... .....+++++.+|+.+||..||++|||++|+++
T Consensus 273 ~~I~~~~g~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 273 QLIMMVLGTPSPAVIQAVGAERVRAYIQS-LPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp HHHHHHHCCCCGGGTC-----CHHHHHHS-SCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHhcCCCChHHhhhhhhhhhhhhhhc-CCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 111111 0010 00 000000 000000000 000123457899999999999999999999975
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.2e-38 Score=323.23 Aligned_cols=212 Identities=19% Similarity=0.264 Sum_probs=156.4
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
+|||||++++++.+.+..++|||||++|+|.++++ .+++.++..++.|++.||+||| +++|+||||||+|||+
T Consensus 78 ~h~nIv~l~~~~~~~~~~~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl 150 (361)
T 4f9c_A 78 GQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLY 150 (361)
T ss_dssp SBTTBCCCSEEEEETTEEEEEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEE
T ss_pred CCCCCceEEEEEEECCEEEEEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEE
Confidence 49999999999999999999999999999999995 4899999999999999999999 9999999999999999
Q ss_pred CCC-CcEEEcccCCcccCCCCCc----------------------------ccccccCCCCCCCCCCCCCCC-CCcchhH
Q 047800 396 DDN-MVAHLSDFGIAKTGEDQSM----------------------------TQTQTLATIGYMAPEYGREGR-VSANGDV 445 (547)
Q Consensus 396 ~~~-~~~kl~Dfg~a~~~~~~~~----------------------------~~~~~~gt~~y~aPE~~~~~~-~~~~sDv 445 (547)
+.+ +.+||+|||+|+...+... .....+||+.|+|||++.+.. |+.++||
T Consensus 151 ~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~Di 230 (361)
T 4f9c_A 151 NRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDM 230 (361)
T ss_dssp ETTTTEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHH
T ss_pred eCCCCeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccch
Confidence 876 7999999999975432211 112347999999999998764 8999999
Q ss_pred HHHHHHHHHHHhCCCCCchhhhhhhhhhhhhhhcc---------------------C-chhhhhhhhhhc---cch----
Q 047800 446 YSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWL---------------------P-ISIMEVIDANLL---SRE---- 496 (547)
Q Consensus 446 ~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~---------------------~-~~~~~~~~~~~~---~~~---- 496 (547)
||+||++|||++|+.||....++...+........ + ............ ..+
T Consensus 231 WSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~ 310 (361)
T 4f9c_A 231 WSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTS 310 (361)
T ss_dssp HHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC-----------
T ss_pred hhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhcccccccccccc
Confidence 99999999999999999664443332222211000 0 000000000000 000
Q ss_pred -----hhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 497 -----DIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 497 -----~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
.........+++++.+|+.+||..||++|||++|+++.
T Consensus 311 ~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~H 353 (361)
T 4f9c_A 311 DIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLH 353 (361)
T ss_dssp -----------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred ccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00000012234678999999999999999999999753
No 18
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1e-38 Score=341.06 Aligned_cols=248 Identities=20% Similarity=0.242 Sum_probs=181.9
Q ss_pred ccCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCcccc
Q 047800 245 EILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPV 323 (547)
Q Consensus 245 ~~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l 323 (547)
...|.|+||.|+......+.-.++.|+-......... ....+..|.. +..+ +..+|||||++
T Consensus 195 k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~----------~~~~~~~E~~~l~ll-------~~~~HP~IV~l 257 (689)
T 3v5w_A 195 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ----------GETLALNERIMLSLV-------STGDCPFIVCM 257 (689)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTT----------CHHHHHHHHHHHHHH-------SSSCCTTBCCE
T ss_pred EEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhh----------hHHHHHHHHHHHHHH-------hhCCCCCEeEE
Confidence 3456689999988766666555665532100000000 0001222222 2222 23459999999
Q ss_pred ccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCCcEEE
Q 047800 324 ATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHL 403 (547)
Q Consensus 324 ~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~~~kl 403 (547)
++++.+.+..|+|||||+||+|.+++.+.+ .+++..+..++.||+.||+||| +++|+||||||+|||++.+|.+||
T Consensus 258 ~~~f~~~~~lylVmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL 333 (689)
T 3v5w_A 258 SYAFHTPDKLSFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRI 333 (689)
T ss_dssp EEEEECSSEEEEEECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEE
T ss_pred EEEEEECCEEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEe
Confidence 999999999999999999999999998754 6999999999999999999999 999999999999999999999999
Q ss_pred cccCCcccCCCCCcccccccCCCCCCCCCCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhhhhccCc
Q 047800 404 SDFGIAKTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPI 482 (547)
Q Consensus 404 ~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 482 (547)
+|||+|+...... ....+||+.|||||++.+ ..|+.++||||+||++|||++|++||......... ....
T Consensus 334 ~DFGlA~~~~~~~--~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~--~i~~----- 404 (689)
T 3v5w_A 334 SDLGLACDFSKKK--PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH--EIDR----- 404 (689)
T ss_dssp CCCTTCEECSSCC--CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHH--HHHH-----
T ss_pred cccceeeecCCCC--CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH--HHHH-----
Confidence 9999998765432 234589999999999975 57999999999999999999999999764322210 0000
Q ss_pred hhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCC-----hHHHHH
Q 047800 483 SIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRIN-----PKEIVT 533 (547)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps-----~~eil~ 533 (547)
.+... . ...+..+++++.+|+.+||..||++|++ ++||++
T Consensus 405 ---~i~~~----~----~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 405 ---MTLTM----A----VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp ---HHHHC----C----CCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred ---hhcCC----C----CCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 00000 0 0111234567899999999999999998 577654
No 19
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2e-38 Score=340.67 Aligned_cols=244 Identities=16% Similarity=0.193 Sum_probs=184.5
Q ss_pred cCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCccccc
Q 047800 246 ILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPVA 324 (547)
Q Consensus 246 ~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l~ 324 (547)
..+.|.|+.++......+...++.|..... . ......+..|+. +..++ |||||+++
T Consensus 164 ~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~---~----------~~~~~~~~~Ei~il~~l~----------hpnIv~l~ 220 (573)
T 3uto_A 164 ELGTGAFGVVHRVTERATGNNFAAKFVMTP---H----------ESDKETVRKEIQTMSVLR----------HPTLVNLH 220 (573)
T ss_dssp EEEEETTEEEEEEEETTTCCEEEEEEEECC---S----------HHHHHHHHHHHHHHHHTC----------CTTBCCEE
T ss_pred EEeeccCeEEEEEEECCCCCEEEEEEEecc---c----------hhhHHHHHHHHHHHHhCC----------CCCCCeEE
Confidence 345578888877665554444544421100 0 000111445555 66666 99999999
Q ss_pred cccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCC--CcEE
Q 047800 325 TSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDN--MVAH 402 (547)
Q Consensus 325 ~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~--~~~k 402 (547)
+++.++...++|||||+||+|.+++......+++.++..++.||+.||+||| +++|+||||||+|||++.+ +.+|
T Consensus 221 ~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vK 297 (573)
T 3uto_A 221 DAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELK 297 (573)
T ss_dssp EEEECSSEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEE
T ss_pred EEEEECCEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEE
Confidence 9999999999999999999999999766557999999999999999999999 9999999999999999854 8999
Q ss_pred EcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhhhhccCc
Q 047800 403 LSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPI 482 (547)
Q Consensus 403 l~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 482 (547)
|+|||+|+....... ....+||+.|||||++.+..|+.++||||+||++|||++|++||.+....+.. .....
T Consensus 298 l~DFG~a~~~~~~~~-~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~-~~i~~----- 370 (573)
T 3uto_A 298 LIDFGLTAHLDPKQS-VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETL-RNVKS----- 370 (573)
T ss_dssp ECCCSSCEECCTTSE-EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH-HHHHT-----
T ss_pred EeeccceeEccCCCc-eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH-HHHHh-----
Confidence 999999987654332 33457999999999999999999999999999999999999999764333221 11100
Q ss_pred hhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHH
Q 047800 483 SIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVT 533 (547)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~ 533 (547)
... .........+++++.+|+.+||..||++|||+.|+++
T Consensus 371 -------~~~----~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 371 -------CDW----NMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp -------TCC----CCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -------CCC----CCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 000 0000111223566899999999999999999999986
No 20
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.6e-37 Score=309.99 Aligned_cols=255 Identities=21% Similarity=0.272 Sum_probs=189.6
Q ss_pred ccCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCcccc
Q 047800 245 EILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPV 323 (547)
Q Consensus 245 ~~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l 323 (547)
...+.|.++.++......+...++.+..... .. .....+..|+. +..++ ||||+++
T Consensus 16 ~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~---~~----------~~~~~~~~E~~~l~~l~----------hp~iv~~ 72 (310)
T 3s95_A 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRF---DE----------ETQRTFLKEVKVMRCLE----------HPNVLKF 72 (310)
T ss_dssp EEEECCSSEEEEEEEETTTCCEEEEEEESCC---CH----------HHHHHHHHHHHHHTTCC----------CTTBCCE
T ss_pred ceecCCCCEEEEEEEECCCCcEEEEEEeccC---CH----------HHHHHHHHHHHHHHhCC----------CcCcccE
Confidence 4456688888887665544444443311100 00 00011444444 33333 9999999
Q ss_pred ccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCCcEEE
Q 047800 324 ATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHL 403 (547)
Q Consensus 324 ~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~~~kl 403 (547)
++++.+++..++||||+++|+|.++++.....+++.++..++.|++.||+||| +++|+||||||+||+++.++.+||
T Consensus 73 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl 149 (310)
T 3s95_A 73 IGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVV 149 (310)
T ss_dssp EEEEEETTEEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEE
T ss_pred EEEEecCCeeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEE
Confidence 99999999999999999999999999986668999999999999999999999 999999999999999999999999
Q ss_pred cccCCcccCCCCCccc--------------ccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhh
Q 047800 404 SDFGIAKTGEDQSMTQ--------------TQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEE 469 (547)
Q Consensus 404 ~Dfg~a~~~~~~~~~~--------------~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~ 469 (547)
+|||+++......... ....||+.|+|||++.+..++.++||||||+++|||++|..||.......
T Consensus 150 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~ 229 (310)
T 3s95_A 150 ADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRT 229 (310)
T ss_dssp CCCTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBC
T ss_pred eecccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhH
Confidence 9999997654322111 13469999999999999999999999999999999999999987643322
Q ss_pred hhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHHHH
Q 047800 470 MTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESLL 543 (547)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~~~ 543 (547)
..... ......+.. .+..+++++.+++.+||+.||++|||+.++++.|+.+.+...
T Consensus 230 ~~~~~--------~~~~~~~~~----------~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~ 285 (310)
T 3s95_A 230 MDFGL--------NVRGFLDRY----------CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285 (310)
T ss_dssp TTSSB--------CHHHHHHHT----------CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred HHHhh--------hhhcccccc----------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcc
Confidence 11110 001111110 012234568899999999999999999999999999987753
No 21
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.1e-37 Score=310.94 Aligned_cols=265 Identities=23% Similarity=0.348 Sum_probs=183.2
Q ss_pred CeEeCCCCccc-cccCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhc
Q 047800 233 DDLDLSFNKLE-GEILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKR 310 (547)
Q Consensus 233 ~~l~l~~N~l~-~~~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 310 (547)
...++..+.+. ....+.|.++.++.....+....++....... ... ....+..|+. +..++
T Consensus 30 ~~~~i~~~~y~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~~~--~~~-----------~~~~~~~E~~~l~~l~---- 92 (309)
T 3p86_A 30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDF--HAE-----------RVNEFLREVAIMKRLR---- 92 (309)
T ss_dssp --CBCCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEECCCCC--SHH-----------HHHHHHHHHHHHHHCC----
T ss_pred ccccCChhHceeeeEeecCCCeEEEEEEECCCcEEEEEecCCCC--CHH-----------HHHHHHHHHHHHHhCC----
Confidence 33344444443 23445588888887765544433222111000 000 0011444554 55555
Q ss_pred CCCCCCCCCccccccccCccceeEEEEeccCCCChhHHhhhCC--CCCCHHHHHHHHHHHHHHHHHHHccCCCC--cccc
Q 047800 311 GKRPSNDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGN--CSLDIFQRLNSMIDVALALEYMHFGYSAP--VIHC 386 (547)
Q Consensus 311 ~~~~~~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~~~~--i~H~ 386 (547)
||||+++++++.+.+..++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +++ |+||
T Consensus 93 ------hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~ 163 (309)
T 3p86_A 93 ------HPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHR 163 (309)
T ss_dssp ------CTTBCCEEEEECSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCT
T ss_pred ------CCCEeeEEEEEEECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECC
Confidence 9999999999999999999999999999999998754 23899999999999999999999 888 9999
Q ss_pred CCCCCcEEeCCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhh
Q 047800 387 DIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIF 466 (547)
Q Consensus 387 dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~ 466 (547)
||||+||+++.++.+||+|||+++.............||+.|+|||++.+..++.++||||+|+++|||++|+.||....
T Consensus 164 Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~ 243 (309)
T 3p86_A 164 NLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLN 243 (309)
T ss_dssp TCCGGGEEECTTCCEEECCCC-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSC
T ss_pred CCChhhEEEeCCCcEEECCCCCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999999765444333444579999999999999999999999999999999999999997643
Q ss_pred hhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHHH
Q 047800 467 NEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESL 542 (547)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~~ 542 (547)
..+......... .. ...+..+++++.+++.+||+.||++|||+.++++.|+.+.++.
T Consensus 244 ~~~~~~~~~~~~---------------~~----~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 244 PAQVVAAVGFKC---------------KR----LEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp HHHHHHHHHHSC---------------CC----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHhcC---------------CC----CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 322211100000 00 0111223556899999999999999999999999999887654
No 22
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.2e-37 Score=312.56 Aligned_cols=222 Identities=22% Similarity=0.258 Sum_probs=166.0
Q ss_pred CCCCCccccccccCccc----eeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCC---------
Q 047800 315 SNDANISPVATSCSNEE----FKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSA--------- 381 (547)
Q Consensus 315 ~~H~nIv~l~~~~~~~~----~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~--------- 381 (547)
..|||||++++++.... ..++||||+++|+|.++++... +++..+..++.|++.||+||| +.
T Consensus 75 l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~ 149 (322)
T 3soc_A 75 MKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANV--VSWNELCHIAETMARGLAYLH---EDIPGLKDGHK 149 (322)
T ss_dssp CCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEE
T ss_pred CCCCCchhhcceeccCCCCCceEEEEEecCCCCCHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHH---hhccccccccC
Confidence 45999999999998754 4699999999999999998764 999999999999999999999 88
Q ss_pred -CccccCCCCCcEEeCCCCcEEEcccCCcccCCCCCc--ccccccCCCCCCCCCCCCCC-----CCCcchhHHHHHHHHH
Q 047800 382 -PVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSM--TQTQTLATIGYMAPEYGREG-----RVSANGDVYSFGIMLM 453 (547)
Q Consensus 382 -~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~-----~~~~~sDv~s~G~il~ 453 (547)
+|+||||||+||+++.++.+||+|||+++....... ......||+.|+|||++.+. .++.++|||||||++|
T Consensus 150 ~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~ 229 (322)
T 3soc_A 150 PAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLW 229 (322)
T ss_dssp CEEECSCCSGGGEEECTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEeCCCChHhEEECCCCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHH
Confidence 999999999999999999999999999976443222 22335799999999999863 4667899999999999
Q ss_pred HHHhCCCCCchhhhhhhh-hhhhhhhccC-chhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHH
Q 047800 454 KTFIGKKPTDEIFNEEMT-LKHWVNDWLP-ISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEI 531 (547)
Q Consensus 454 elltg~~p~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei 531 (547)
||++|+.||......... .......... ....+.+..................++++.+++.+||+.||++|||+.|+
T Consensus 230 el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el 309 (322)
T 3soc_A 230 ELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCV 309 (322)
T ss_dssp HHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHH
Confidence 999999999764332211 1110000000 01111111111111111111123346679999999999999999999999
Q ss_pred HHHHHHHHHH
Q 047800 532 VTRLLKIIES 541 (547)
Q Consensus 532 l~~L~~i~~~ 541 (547)
+++|+++.+.
T Consensus 310 l~~L~~l~~~ 319 (322)
T 3soc_A 310 GERITQMQRL 319 (322)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998764
No 23
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=4.3e-37 Score=305.01 Aligned_cols=195 Identities=24% Similarity=0.298 Sum_probs=162.0
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~ 396 (547)
||||+++++++..++..++||||+++|+|.+++... .+++.++..++.|++.||+||| +++|+||||||+||+++
T Consensus 76 hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~ 150 (297)
T 3fxz_A 76 NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLG 150 (297)
T ss_dssp CTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEC
T ss_pred CCCCCeEeEEEEECCEEEEEEECCCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEC
Confidence 999999999999999999999999999999999876 4899999999999999999999 99999999999999999
Q ss_pred CCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhh
Q 047800 397 DNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWV 476 (547)
Q Consensus 397 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~ 476 (547)
.++.+||+|||++..............||+.|+|||++.+..++.++||||+||++|||++|+.||............ .
T Consensus 151 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~-~ 229 (297)
T 3fxz_A 151 MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI-A 229 (297)
T ss_dssp TTCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH-H
T ss_pred CCCCEEEeeCCCceecCCcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-H
Confidence 999999999999987655444445567999999999999999999999999999999999999999764322211110 0
Q ss_pred hhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 477 NDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
....+ ....++.++..+.+++.+||+.||++|||++|+++.
T Consensus 230 ~~~~~-----------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 230 TNGTP-----------------ELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp HHCSC-----------------CCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred hCCCC-----------------CCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 00000 001112335568999999999999999999999863
No 24
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=9.8e-37 Score=311.83 Aligned_cols=203 Identities=26% Similarity=0.411 Sum_probs=166.3
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCC---------------CCCCHHHHHHHHHHHHHHHHHHHccCCC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGN---------------CSLDIFQRLNSMIDVALALEYMHFGYSA 381 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~i~~~l~~lH~~~~~ 381 (547)
||||++++++|.+.+..++||||+++|+|.+++.... ..+++.+++.++.|++.||+||| ++
T Consensus 146 hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~ 222 (370)
T 2psq_A 146 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQ 222 (370)
T ss_dssp CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HT
T ss_pred CCCEeeEEEEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hC
Confidence 9999999999999999999999999999999998643 24889999999999999999999 99
Q ss_pred CccccCCCCCcEEeCCCCcEEEcccCCcccCCCCCc--ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHh-C
Q 047800 382 PVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSM--TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFI-G 458 (547)
Q Consensus 382 ~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ellt-g 458 (547)
+|+||||||+||+++.++.+||+|||+++....... ......+|+.|+|||++.+..++.++|||||||++|||++ |
T Consensus 223 ~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g 302 (370)
T 2psq_A 223 KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 302 (370)
T ss_dssp TEECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred CeeccccchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999986543221 1223357889999999999899999999999999999999 9
Q ss_pred CCCCchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHH
Q 047800 459 KKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKI 538 (547)
Q Consensus 459 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i 538 (547)
+.||......+.. . .+..... ...+..++.++.+++.+||+.||++|||+.|+++.|+++
T Consensus 303 ~~p~~~~~~~~~~-~-------------~~~~~~~------~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~i 362 (370)
T 2psq_A 303 GSPYPGIPVEELF-K-------------LLKEGHR------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362 (370)
T ss_dssp CCSSTTCCGGGHH-H-------------HHHTTCC------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHH-H-------------HHhcCCC------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 9999764322211 0 0000000 011122355789999999999999999999999999998
Q ss_pred HHHH
Q 047800 539 IESL 542 (547)
Q Consensus 539 ~~~~ 542 (547)
.+..
T Consensus 363 l~~~ 366 (370)
T 2psq_A 363 LTLT 366 (370)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8654
No 25
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=2e-36 Score=301.68 Aligned_cols=209 Identities=23% Similarity=0.348 Sum_probs=162.9
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
.||||+++++++.. +..++||||+++|+|.+++......+++.+++.++.|++.||+||| +.+|+||||||+||++
T Consensus 90 ~h~~iv~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll 165 (307)
T 3lb7_A 90 RHVNILLFMGYMTK-DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFL 165 (307)
T ss_dssp CCTTBCCEEEEECS-SSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCSSSEEE
T ss_pred CCCCEEEEEEEEcc-CcEEEEEecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCChhhEEE
Confidence 39999999998765 4579999999999999999876678999999999999999999999 8999999999999999
Q ss_pred CCCCcEEEcccCCcccCCCC--CcccccccCCCCCCCCCCCC---CCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhh
Q 047800 396 DDNMVAHLSDFGIAKTGEDQ--SMTQTQTLATIGYMAPEYGR---EGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEM 470 (547)
Q Consensus 396 ~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~ 470 (547)
+.++.+||+|||+++..... ........||+.|+|||++. +..++.++||||||+++|||++|+.||......+.
T Consensus 166 ~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~ 245 (307)
T 3lb7_A 166 HEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ 245 (307)
T ss_dssp CTTSCEEECCCCSSCC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH
T ss_pred cCCCCEEEccCCCceecccccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHH
Confidence 99999999999999754321 12233447999999999885 56689999999999999999999999976443332
Q ss_pred hhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHHHH
Q 047800 471 TLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESLL 543 (547)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~~~ 543 (547)
................ ....+++++.+++.+||+.||++|||+.++++.|+.+...+.
T Consensus 246 ~~~~~~~~~~~~~~~~---------------~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~p 303 (307)
T 3lb7_A 246 IIFMVGRGYASPDLSK---------------LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp HHHHHHHTCCCCCSTT---------------SCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHhcCCCCcchhh---------------hhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhcc
Confidence 2111111111000000 011234568999999999999999999999999998876543
No 26
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.3e-37 Score=319.20 Aligned_cols=253 Identities=25% Similarity=0.370 Sum_probs=189.0
Q ss_pred ccCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCcccc
Q 047800 245 EILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPV 323 (547)
Q Consensus 245 ~~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l 323 (547)
...+.|.++.++......+...++.+........... ..+..|+. +..++ ||||+++
T Consensus 120 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~------------~~~~~E~~~l~~l~----------hpniv~~ 177 (377)
T 3cbl_A 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLK------------AKFLQEARILKQYS----------HPNIVRL 177 (377)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHH------------TTTTHHHHHHTTCC----------CTTBCCE
T ss_pred eEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHH------------HHHHHHHHHHHhCC----------CCCEEEE
Confidence 3455688999988777655555555522111000000 00334444 43434 9999999
Q ss_pred ccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCCcEEE
Q 047800 324 ATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHL 403 (547)
Q Consensus 324 ~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~~~kl 403 (547)
++++..++..++||||+++|+|.+++...+..+++.++..++.|++.||+||| +++|+||||||+||+++.++.+||
T Consensus 178 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl 254 (377)
T 3cbl_A 178 IGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKI 254 (377)
T ss_dssp EEEECSSSSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEE
T ss_pred EEEEecCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEE
Confidence 99999999999999999999999999876557999999999999999999999 999999999999999999999999
Q ss_pred cccCCcccCCCCCccc--ccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCchhhhhhhhhhhhhhhcc
Q 047800 404 SDFGIAKTGEDQSMTQ--TQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFI-GKKPTDEIFNEEMTLKHWVNDWL 480 (547)
Q Consensus 404 ~Dfg~a~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 480 (547)
+|||+++......... ....+++.|+|||++.+..++.++|||||||++|||++ |..||........ ...
T Consensus 255 ~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~--~~~----- 327 (377)
T 3cbl_A 255 SDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT--REF----- 327 (377)
T ss_dssp CCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHH--HHH-----
T ss_pred CcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH--HHH-----
Confidence 9999997644321111 11235678999999988889999999999999999998 9999976433221 111
Q ss_pred CchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHHH
Q 047800 481 PISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESL 542 (547)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~~ 542 (547)
+.... ....+..+++++.+++.+||+.||++|||++++++.|+++.++.
T Consensus 328 -------~~~~~------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~~ 376 (377)
T 3cbl_A 328 -------VEKGG------RLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRH 376 (377)
T ss_dssp -------HHTTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred -------HHcCC------CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhhc
Confidence 11100 01111223556899999999999999999999999999987653
No 27
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=7e-37 Score=307.44 Aligned_cols=203 Identities=26% Similarity=0.405 Sum_probs=165.3
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
.||||+++++++.+++..++||||+++|+|.++++.....+++.+++.++.|++.||+||| +.+|+||||||+||++
T Consensus 108 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll 184 (325)
T 3kul_A 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLV 184 (325)
T ss_dssp CCTTBCCEEEEECGGGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEE
T ss_pred CCCCCCcEEEEEEeCCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEE
Confidence 3999999999999999999999999999999999877667999999999999999999999 9999999999999999
Q ss_pred CCCCcEEEcccCCcccCCCCCc---ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCchhhhhhhh
Q 047800 396 DDNMVAHLSDFGIAKTGEDQSM---TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFI-GKKPTDEIFNEEMT 471 (547)
Q Consensus 396 ~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ellt-g~~p~~~~~~~~~~ 471 (547)
+.++.+||+|||+++....... ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||......+..
T Consensus 185 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~ 264 (325)
T 3kul_A 185 DSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVI 264 (325)
T ss_dssp CTTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHH
T ss_pred CCCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHH
Confidence 9999999999999986543321 1222346778999999988889999999999999999998 99999764333221
Q ss_pred hhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHH
Q 047800 472 LKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIES 541 (547)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~ 541 (547)
. .. .... ....+..++.++.+++.+||..||++|||+.++++.|+.+.+.
T Consensus 265 ~-~~-------------~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~ 314 (325)
T 3kul_A 265 S-SV-------------EEGY------RLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS 314 (325)
T ss_dssp H-HH-------------HTTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred H-HH-------------HcCC------CCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence 1 00 0000 0011122356689999999999999999999999999998764
No 28
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=9.2e-37 Score=312.28 Aligned_cols=203 Identities=23% Similarity=0.426 Sum_probs=156.8
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
.||||+++++++.+.+..++||||+++|+|.++++.....+++.+++.++.|++.||+||| +++|+||||||+||++
T Consensus 104 ~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll 180 (373)
T 2qol_A 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILI 180 (373)
T ss_dssp CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEE
T ss_pred CCCCCCeEEEEEeeCCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEE
Confidence 3999999999999999999999999999999999887667999999999999999999999 8999999999999999
Q ss_pred CCCCcEEEcccCCcccCCCCCcc---cccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCchhhhhhhh
Q 047800 396 DDNMVAHLSDFGIAKTGEDQSMT---QTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFI-GKKPTDEIFNEEMT 471 (547)
Q Consensus 396 ~~~~~~kl~Dfg~a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ellt-g~~p~~~~~~~~~~ 471 (547)
+.++.+||+|||+++........ .....+++.|+|||++.+..++.++||||||+++||+++ |+.||......+..
T Consensus 181 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~ 260 (373)
T 2qol_A 181 NSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260 (373)
T ss_dssp CTTCCEEECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHH
T ss_pred cCCCCEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 99999999999999865433211 112235778999999998899999999999999999997 99999764332211
Q ss_pred hhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHH
Q 047800 472 LKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIES 541 (547)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~ 541 (547)
+.+..... ...+..++.++.+++.+||+.||++||++.++++.|+++.+.
T Consensus 261 --------------~~i~~~~~------~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 261 --------------KAVDEGYR------LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp --------------HHHHTTEE------CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred --------------HHHHcCCC------CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 11111100 001122345689999999999999999999999999998765
No 29
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=3.1e-36 Score=302.78 Aligned_cols=213 Identities=29% Similarity=0.452 Sum_probs=170.0
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCC---CCCCHHHHHHHHHHHHHHHHHHHccCCC---CccccCCC
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGN---CSLDIFQRLNSMIDVALALEYMHFGYSA---PVIHCDIK 389 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~---~~l~~~~~~~i~~~i~~~l~~lH~~~~~---~i~H~dlk 389 (547)
.||||+++++++..+...++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +. +|+|||||
T Consensus 85 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~ivH~Dlk 161 (326)
T 3uim_A 85 VHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLH---DHCDPKIIHRDVK 161 (326)
T ss_dssp CCTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHH---HSSSSCEECCCCS
T ss_pred cCCCccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCeEeCCCc
Confidence 39999999999999999999999999999999998643 35999999999999999999999 66 99999999
Q ss_pred CCcEEeCCCCcEEEcccCCcccCCCCCc-ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhh-
Q 047800 390 ANNVLLDDNMVAHLSDFGIAKTGEDQSM-TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFN- 467 (547)
Q Consensus 390 p~Nill~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~- 467 (547)
|+||+++.++.+||+|||+++....... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||+....
T Consensus 162 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~ 241 (326)
T 3uim_A 162 AANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLA 241 (326)
T ss_dssp GGGEEECTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHT
T ss_pred hhhEEECCCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccc
Confidence 9999999999999999999986543322 23334699999999999888899999999999999999999999975321
Q ss_pred --hhhhhhhhhhhccCc-hhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHH
Q 047800 468 --EEMTLKHWVNDWLPI-SIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLK 537 (547)
Q Consensus 468 --~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~ 537 (547)
.......|....... ......+.... .......+..+.+++.+||+.||++|||+.|+++.|++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 242 NDDDVMLLDWVKGLLKEKKLEALVDVDLQ------GNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp TTSCSBHHHHHTTTTSSCCSTTSSCTTCT------TSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred cccchhHHHHHHHHhhchhhhhhcChhhc------cccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 222233333322221 22222222111 12234457789999999999999999999999999974
No 30
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=6.9e-36 Score=299.63 Aligned_cols=216 Identities=29% Similarity=0.507 Sum_probs=170.5
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCC---CCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCc
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGN---CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANN 392 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~---~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~N 392 (547)
.||||+++++++.+.+..++||||+++|+|.+++.... ..+++.+++.++.|++.||+||| +++++||||||+|
T Consensus 93 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~N 169 (321)
T 2qkw_B 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSIN 169 (321)
T ss_dssp CCTTBCCEEEECCCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTT
T ss_pred CCCCEeeEEEEEcCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHH
Confidence 49999999999999999999999999999999997643 35899999999999999999999 8999999999999
Q ss_pred EEeCCCCcEEEcccCCcccCCCCC--cccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhh
Q 047800 393 VLLDDNMVAHLSDFGIAKTGEDQS--MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEM 470 (547)
Q Consensus 393 ill~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~ 470 (547)
|+++.++.+||+|||+++...... .......||+.|+|||++.+..++.++||||||+++|||++|+.||......+.
T Consensus 170 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~ 249 (321)
T 2qkw_B 170 ILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREM 249 (321)
T ss_dssp EEECTTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSC
T ss_pred EEECCCCCEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHH
Confidence 999999999999999997643221 122334589999999999888999999999999999999999999976433221
Q ss_pred -hhhhhhhhcc-CchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHH
Q 047800 471 -TLKHWVNDWL-PISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIE 540 (547)
Q Consensus 471 -~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~ 540 (547)
....|..... ...+...+++.. .......++..+.+++.+||+.||++|||+.|+++.|+.+.+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~ 315 (321)
T 2qkw_B 250 VNLAEWAVESHNNGQLEQIVDPNL------ADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315 (321)
T ss_dssp CCHHHHTHHHHTTTCCCSSSSSSC------TTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHhhhccccccHHHhcChhh------ccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence 1122211110 111112222211 111234567789999999999999999999999999998865
No 31
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-36 Score=304.08 Aligned_cols=198 Identities=19% Similarity=0.261 Sum_probs=162.3
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~ 396 (547)
||||+++++++.+.+..++||||+++|+|.+++......+++.++..++.|++.||+||| +++|+||||||+||+++
T Consensus 60 hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~ 136 (321)
T 1tki_A 60 HRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQ 136 (321)
T ss_dssp CTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEES
T ss_pred CCCCCeEeEEEecCCEEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEc
Confidence 999999999999999999999999999999999876667999999999999999999999 99999999999999998
Q ss_pred C--CCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhh
Q 047800 397 D--NMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKH 474 (547)
Q Consensus 397 ~--~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~ 474 (547)
. ++.+||+|||+++...... ......||+.|+|||++.+..++.++||||+||++|||++|..||......+. ...
T Consensus 137 ~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~ 214 (321)
T 1tki_A 137 TRRSSTIKIIEFGQARQLKPGD-NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQI-IEN 214 (321)
T ss_dssp SSSCCCEEECCCTTCEECCTTC-EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHH
T ss_pred cCCCCCEEEEECCCCeECCCCC-ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHH-HHH
Confidence 7 7899999999998765432 23345799999999999988899999999999999999999999976433221 111
Q ss_pred hhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHH
Q 047800 475 WVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRL 535 (547)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L 535 (547)
.. ........ .....++.++.+++.+||..||++|||+.|+++.-
T Consensus 215 i~------------~~~~~~~~----~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp 259 (321)
T 1tki_A 215 IM------------NAEYTFDE----EAFKEISIEAMDFVDRLLVKERKSRMTASEALQHP 259 (321)
T ss_dssp HH------------HTCCCCCH----HHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred HH------------cCCCCCCh----hhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcCh
Confidence 11 11000000 01122356789999999999999999999998753
No 32
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.2e-35 Score=299.22 Aligned_cols=257 Identities=18% Similarity=0.153 Sum_probs=189.6
Q ss_pred cccCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCccc
Q 047800 244 GEILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISP 322 (547)
Q Consensus 244 ~~~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~ 322 (547)
....+.|.++.++......+...++.|..... .... .+..|+. +..+. .||||++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~------------~~~~E~~~l~~l~---------~h~~i~~ 69 (330)
T 2izr_A 14 GKKIGCGNFGELRLGKNLYTNEYVAIKLEPMK---SRAP------------QLHLEYRFYKQLG---------SGDGIPQ 69 (330)
T ss_dssp EEECCC-CTTSEEEEEETTTTEEEEEEEEETT---CSSC------------CHHHHHHHHHHHC---------SCTTSCC
T ss_pred EEEeeccCCceEEEEEECCCCcEEEEEEeccc---cchH------------HHHHHHHHHHHhh---------CCCCCCE
Confidence 34567788999988765444444554422110 0000 0455555 55551 3999999
Q ss_pred cccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCCc--
Q 047800 323 VATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMV-- 400 (547)
Q Consensus 323 l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~~-- 400 (547)
+++++..+...++||||+ +|+|.+++......+++.+++.++.|++.||+||| +.+|+||||||+||+++.++.
T Consensus 70 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~ 145 (330)
T 2izr_A 70 VYYFGPCGKYNAMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKT 145 (330)
T ss_dssp EEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTC
T ss_pred EEEEEecCCccEEEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCC
Confidence 999999999999999999 89999999876567999999999999999999999 899999999999999998887
Q ss_pred ---EEEcccCCcccCCCCCcc-------cccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhh
Q 047800 401 ---AHLSDFGIAKTGEDQSMT-------QTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEM 470 (547)
Q Consensus 401 ---~kl~Dfg~a~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~ 470 (547)
+||+|||+++........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 146 ~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~ 225 (330)
T 2izr_A 146 QQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTL 225 (330)
T ss_dssp TTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSH
T ss_pred CceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccH
Confidence 999999999865432211 2345799999999999999999999999999999999999999976432221
Q ss_pred hhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHHH
Q 047800 471 TLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESL 542 (547)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~~ 542 (547)
. ..+ ..+.......... .....++ ++.+++..||+.||.+||+++++.+.|+.+.++.
T Consensus 226 ~--~~~--------~~i~~~~~~~~~~---~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~ 283 (330)
T 2izr_A 226 K--ERY--------QKIGDTKRATPIE---VLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK 283 (330)
T ss_dssp H--HHH--------HHHHHHHHHSCHH---HHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred H--HHH--------HHHHhhhccCCHH---HHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence 0 000 0000000000000 0001123 7999999999999999999999999999887764
No 33
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=5.8e-35 Score=326.69 Aligned_cols=254 Identities=33% Similarity=0.516 Sum_probs=186.4
Q ss_pred CcccCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccc
Q 047800 3 PPEIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTF 82 (547)
Q Consensus 3 p~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 82 (547)
|..|+++++|+.|+|++|++++..|..|..+++|++|+|++|+++ +.+|..+.++++|++|+|++|++++.+|.+|
T Consensus 435 p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~----~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~ 510 (768)
T 3rgz_A 435 PSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLT----GEIPSGLSNCTNLNWISLSNNRLTGEIPKWI 510 (768)
T ss_dssp CGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCC----SCCCGGGGGCTTCCEEECCSSCCCSCCCGGG
T ss_pred cHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCccc----CcCCHHHhcCCCCCEEEccCCccCCcCChHH
Confidence 444555555555555555555555555555555555555555555 4555556666666666666666665566666
Q ss_pred cCCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCc---------------------
Q 047800 83 GNLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSH--------------------- 141 (547)
Q Consensus 83 ~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~--------------------- 141 (547)
+++++|++|+|++|++++..+. .+.++++|++|+|++|++++..|..++.....
T Consensus 511 ~~l~~L~~L~L~~N~l~~~~p~-----~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 585 (768)
T 3rgz_A 511 GRLENLAILKLSNNSFSGNIPA-----ELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKK 585 (768)
T ss_dssp GGCTTCCEEECCSSCCEEECCG-----GGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCT
T ss_pred hcCCCCCEEECCCCcccCcCCH-----HHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccc
Confidence 6666666666666666655554 56666666666666666665544432210000
Q ss_pred ------------------------------------chhhhccccCCcccEEEccCCcCCCCCCcCCCCCcccccccccc
Q 047800 142 ------------------------------------SLEFFVMSYCNDILYLDLSSNFLTGPLPLEIGNLKGLVGVDFSM 185 (547)
Q Consensus 142 ------------------------------------~~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~ 185 (547)
......++.+.+|++||||+|+++|.+|.+++++++|+.|+|++
T Consensus 586 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~ 665 (768)
T 3rgz_A 586 ECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGH 665 (768)
T ss_dssp TCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCS
T ss_pred cccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcC
Confidence 00011355678899999999999999999999999999999999
Q ss_pred ccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCCccccccCCCCccCCcchhcccCccc
Q 047800 186 NNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKLEGEILRGGSFGNFLVELFEGNKL 265 (547)
Q Consensus 186 N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~ 265 (547)
|.+ +|.+|+.|+.+++|+.|||++|+++|.+|..+..+++|+.||+++|+++|.+|..+.|.++....+.||+.
T Consensus 666 N~l------~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~ 739 (768)
T 3rgz_A 666 NDI------SGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPG 739 (768)
T ss_dssp SCC------CSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTE
T ss_pred Ccc------CCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCch
Confidence 999 78999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCC
Q 047800 266 LYGSPC 271 (547)
Q Consensus 266 ~c~~~c 271 (547)
.||.|.
T Consensus 740 Lcg~~l 745 (768)
T 3rgz_A 740 LCGYPL 745 (768)
T ss_dssp EESTTS
T ss_pred hcCCCC
Confidence 999873
No 34
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.1e-36 Score=304.73 Aligned_cols=244 Identities=20% Similarity=0.248 Sum_probs=174.7
Q ss_pred ccCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCcccc
Q 047800 245 EILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPV 323 (547)
Q Consensus 245 ~~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l 323 (547)
...+.|.++.++......+...++.+........... ..+..|+. +..++ ||||+++
T Consensus 16 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~------------~~~~~Ei~~l~~l~----------hpnIv~l 73 (347)
T 3zgw_A 16 ETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDL------------PRIKTEIEALKNLR----------HQHICQL 73 (347)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---C------------CHHHHHHHHHHTCC----------CTTBCCE
T ss_pred EEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHH------------HHHHHHHHHHHhCC----------CCCEeeE
Confidence 3445588888887665444444554421111000000 01445554 44445 9999999
Q ss_pred ccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCCcEEE
Q 047800 324 ATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHL 403 (547)
Q Consensus 324 ~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~~~kl 403 (547)
++++.+.+..++||||+++|+|.+++.... .+++.++..++.|++.||+||| +++|+||||||+||+++.++.+||
T Consensus 74 ~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~kL 149 (347)
T 3zgw_A 74 YHVLETANKIFMVLEYCPGGELFDYIISQD-RLSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKL 149 (347)
T ss_dssp EEEEECSSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEE
T ss_pred EEEEEeCCEEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCccHHHEEEcCCCCEEE
Confidence 999999999999999999999999997654 6999999999999999999999 999999999999999999999999
Q ss_pred cccCCcccCCCCC-cccccccCCCCCCCCCCCCCCCC-CcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhhhhccC
Q 047800 404 SDFGIAKTGEDQS-MTQTQTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWLP 481 (547)
Q Consensus 404 ~Dfg~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 481 (547)
+|||++....... .......||+.|+|||++.+..+ +.++||||+||++|||++|+.||......... ..
T Consensus 150 ~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~-~~------- 221 (347)
T 3zgw_A 150 IDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALY-KK------- 221 (347)
T ss_dssp CCCTTCBC--------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-HH-------
T ss_pred EeccCcccccCCCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHH-HH-------
Confidence 9999987654322 22334579999999999988875 89999999999999999999999764322211 11
Q ss_pred chhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHH
Q 047800 482 ISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRL 535 (547)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L 535 (547)
+.... . ..+..+++++.+++.+||..||++|||++|+++.-
T Consensus 222 -----i~~~~----~----~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~hp 262 (347)
T 3zgw_A 222 -----IMRGK----Y----DVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNHP 262 (347)
T ss_dssp -----HHHTC----C----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTCH
T ss_pred -----HHcCC----C----CCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcCc
Confidence 00000 0 00112345688999999999999999999998753
No 35
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.4e-36 Score=293.98 Aligned_cols=202 Identities=27% Similarity=0.422 Sum_probs=166.4
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~ 396 (547)
||||+++++++.+++..++||||+++|+|.+++......+++..+..++.|++.||+||| +++++||||||+||+++
T Consensus 64 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~ 140 (269)
T 4hcu_A 64 HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVG 140 (269)
T ss_dssp CTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEC
T ss_pred CCCEeeEEEEEecCCceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEc
Confidence 999999999999999999999999999999999877667999999999999999999999 99999999999999999
Q ss_pred CCCcEEEcccCCcccCCCCC-cccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCchhhhhhhhhhh
Q 047800 397 DNMVAHLSDFGIAKTGEDQS-MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFI-GKKPTDEIFNEEMTLKH 474 (547)
Q Consensus 397 ~~~~~kl~Dfg~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ellt-g~~p~~~~~~~~~~~~~ 474 (547)
.++.+||+|||+++...... .......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||......+.. ..
T Consensus 141 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~-~~ 219 (269)
T 4hcu_A 141 ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV-ED 219 (269)
T ss_dssp GGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH-HH
T ss_pred CCCCEEeccccccccccccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHH-HH
Confidence 99999999999997654322 12223356788999999998899999999999999999999 99999764332211 11
Q ss_pred hhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHH
Q 047800 475 WVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIES 541 (547)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~ 541 (547)
.... .. ...+..+++++.+++.+||+.||++|||+.++++.|+++.++
T Consensus 220 ~~~~-------------~~------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 220 ISTG-------------FR------LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp HHTT-------------CC------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HhcC-------------cc------CCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 1000 00 000111245689999999999999999999999999998764
No 36
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.7e-36 Score=308.82 Aligned_cols=206 Identities=23% Similarity=0.367 Sum_probs=164.9
Q ss_pred CCCCccccccccCcc-ceeEEEEeccCCCChhHHhhhCCC----------------------------------------
Q 047800 316 NDANISPVATSCSNE-EFKALILEYKPHGSLEKYLYSGNC---------------------------------------- 354 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~-~~~~lv~ey~~~gsL~~~l~~~~~---------------------------------------- 354 (547)
+|||||++++++.+. ...++||||+++|+|.++++....
T Consensus 84 ~hpniv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (359)
T 3vhe_A 84 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSA 163 (359)
T ss_dssp CCTTBCCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------
T ss_pred CCcceeeeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccc
Confidence 399999999998875 448999999999999999986532
Q ss_pred -------------------------CCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCCcEEEcccCCc
Q 047800 355 -------------------------SLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIA 409 (547)
Q Consensus 355 -------------------------~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a 409 (547)
.+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 240 (359)
T 3vhe_A 164 SSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLA 240 (359)
T ss_dssp --------------------CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGG
T ss_pred ccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccce
Confidence 1889999999999999999999 999999999999999999999999999999
Q ss_pred ccCCCCC--cccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCchhhhhhhhhhhhhhhccCchhhh
Q 047800 410 KTGEDQS--MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFI-GKKPTDEIFNEEMTLKHWVNDWLPISIME 486 (547)
Q Consensus 410 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 486 (547)
+...... .......||+.|+|||++.+..++.++||||||+++|||++ |+.||................
T Consensus 241 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~-------- 312 (359)
T 3vhe_A 241 RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG-------- 312 (359)
T ss_dssp SCTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHT--------
T ss_pred eeecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcC--------
Confidence 8653322 12334468899999999998899999999999999999998 999997643322211111100
Q ss_pred hhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHHHH
Q 047800 487 VIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESLL 543 (547)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~~~ 543 (547)
.. ...+..+++++.+++.+||+.||++|||+.|+++.|+++.++..
T Consensus 313 -----~~------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 358 (359)
T 3vhe_A 313 -----TR------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 358 (359)
T ss_dssp -----CC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHT
T ss_pred -----CC------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHhc
Confidence 00 00111234568999999999999999999999999999987653
No 37
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=2.5e-36 Score=296.94 Aligned_cols=205 Identities=24% Similarity=0.365 Sum_probs=157.0
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
.||||+++++++.+ +..++||||+++|+|.+++......+++..++.++.|++.||+||| +++++||||||+||++
T Consensus 74 ~h~~iv~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~ 149 (281)
T 1mp8_A 74 DHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLV 149 (281)
T ss_dssp CCTTBCCEEEEECS-SSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEE
T ss_pred CCCccceEEEEEcc-CccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEE
Confidence 39999999999854 5689999999999999999877667999999999999999999999 8999999999999999
Q ss_pred CCCCcEEEcccCCcccCCCCCc-ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCchhhhhhhhhh
Q 047800 396 DDNMVAHLSDFGIAKTGEDQSM-TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFI-GKKPTDEIFNEEMTLK 473 (547)
Q Consensus 396 ~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ellt-g~~p~~~~~~~~~~~~ 473 (547)
+.++.+||+|||+++....... ......+++.|+|||++.+..++.++||||+|+++|||++ |..||......+.. .
T Consensus 150 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~-~ 228 (281)
T 1mp8_A 150 SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI-G 228 (281)
T ss_dssp EETTEEEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH-H
T ss_pred CCCCCEEECccccccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHH-H
Confidence 9999999999999976543321 1223356788999999988889999999999999999996 99999764332211 1
Q ss_pred hhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHHHHh
Q 047800 474 HWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESLLK 544 (547)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~~~~ 544 (547)
.. ..... ...+..+++++.+++.+||+.||++|||+.|+++.|+++.++..+
T Consensus 229 ~i------------~~~~~-------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 280 (281)
T 1mp8_A 229 RI------------ENGER-------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKA 280 (281)
T ss_dssp HH------------HTTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred HH------------HcCCC-------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhcc
Confidence 10 00000 001122355689999999999999999999999999999887654
No 38
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=2.7e-35 Score=294.21 Aligned_cols=239 Identities=32% Similarity=0.525 Sum_probs=205.5
Q ss_pred CCcccCCCCCCcEEEccC-CccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCc
Q 047800 2 IPPEIGNLHNLEYLGFGH-NKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPN 80 (547)
Q Consensus 2 ip~~~~~l~~L~~L~Ls~-N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 80 (547)
+|++|+++++|++|+|++ |.+.+.+|..|.++++|++|+|++|+|+ +.+|..+.++++|++|+|++|+|++..|.
T Consensus 68 ~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 143 (313)
T 1ogq_A 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVS----GAIPDFLSQIKTLVTLDFSYNALSGTLPP 143 (313)
T ss_dssp CCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCE----EECCGGGGGCTTCCEEECCSSEEESCCCG
T ss_pred cChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeC----CcCCHHHhCCCCCCEEeCCCCccCCcCCh
Confidence 577888888888888884 8888888888888888888888888887 67888888888888888888888877888
Q ss_pred cccCCCCCCeeeccccccccccCchhhHhhhcCCC-CCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEc
Q 047800 81 TFGNLRNLNELALHNNYLTSSTLELSFLSLLLNCK-SLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDL 159 (547)
Q Consensus 81 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~l 159 (547)
.|..+++|++|+|++|+|++..+. .|..+. +|++|+|++|++++..+.. +.. + +|++|++
T Consensus 144 ~~~~l~~L~~L~L~~N~l~~~~p~-----~l~~l~~~L~~L~L~~N~l~~~~~~~-~~~------------l-~L~~L~L 204 (313)
T 1ogq_A 144 SISSLPNLVGITFDGNRISGAIPD-----SYGSFSKLFTSMTISRNRLTGKIPPT-FAN------------L-NLAFVDL 204 (313)
T ss_dssp GGGGCTTCCEEECCSSCCEEECCG-----GGGCCCTTCCEEECCSSEEEEECCGG-GGG------------C-CCSEEEC
T ss_pred HHhcCCCCCeEECcCCcccCcCCH-----HHhhhhhcCcEEECcCCeeeccCChH-HhC------------C-cccEEEC
Confidence 888888888888888888866665 677777 8888888888887666655 222 2 3999999
Q ss_pred cCCcCCCCCCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCC
Q 047800 160 SSNFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSF 239 (547)
Q Consensus 160 s~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~ 239 (547)
++|.+++.+|..|..+++|+.|++++|.+ ++.+|. +..+++|++|+|++|++++.+|.+|..+++|+.|++++
T Consensus 205 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l------~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 277 (313)
T 1ogq_A 205 SRNMLEGDASVLFGSDKNTQKIHLAKNSL------AFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSF 277 (313)
T ss_dssp CSSEEEECCGGGCCTTSCCSEEECCSSEE------CCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCS
T ss_pred cCCcccCcCCHHHhcCCCCCEEECCCCce------eeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcC
Confidence 99999999999999999999999999999 445554 88899999999999999999999999999999999999
Q ss_pred CccccccCCCCccCCcchhcccCccccccCC
Q 047800 240 NKLEGEILRGGSFGNFLVELFEGNKLLYGSP 270 (547)
Q Consensus 240 N~l~~~~~~~~~~~~l~~l~l~~N~~~c~~~ 270 (547)
|++++.+|..+.+.++..+++.+|+..|+.|
T Consensus 278 N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p 308 (313)
T 1ogq_A 278 NNLCGEIPQGGNLQRFDVSAYANNKCLCGSP 308 (313)
T ss_dssp SEEEEECCCSTTGGGSCGGGTCSSSEEESTT
T ss_pred CcccccCCCCccccccChHHhcCCCCccCCC
Confidence 9999999888889999999999999999965
No 39
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=5.7e-36 Score=300.26 Aligned_cols=242 Identities=21% Similarity=0.243 Sum_probs=182.2
Q ss_pred CCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCcccccc
Q 047800 247 LRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPVAT 325 (547)
Q Consensus 247 ~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l~~ 325 (547)
.+.|.++.++......+...+++|........ . ...+..|+. +..++ ||||+++++
T Consensus 53 lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~-~------------~~~~~~E~~~l~~l~----------h~niv~~~~ 109 (321)
T 2c30_A 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQ-R------------RELLFNEVVIMRDYQ----------HFNVVEMYK 109 (321)
T ss_dssp EEEETTEEEEEEEETTTCCEEEEEEEETTTCC-S------------HHHHHHHHHHHTTCC----------CTTBCCEEE
T ss_pred eccCCCeEEEEEEECCCCcEEEEEEEeccchh-H------------HHHHHHHHHHHHhCC----------CCCcceEEE
Confidence 44577888887766544444555422111000 0 011444444 44444 999999999
Q ss_pred ccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCCcEEEcc
Q 047800 326 SCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSD 405 (547)
Q Consensus 326 ~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~~~kl~D 405 (547)
++...+..++||||+++|+|.+++... .+++.++..++.|++.||+||| +++|+||||||+||+++.++.+||+|
T Consensus 110 ~~~~~~~~~lv~e~~~~~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~D 184 (321)
T 2c30_A 110 SYLVGEELWVLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDGRVKLSD 184 (321)
T ss_dssp EEEETTEEEEEECCCCSCBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECC
T ss_pred EEEECCEEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCcEEEee
Confidence 999999999999999999999999764 5999999999999999999999 89999999999999999999999999
Q ss_pred cCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhhhhccCchhh
Q 047800 406 FGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPISIM 485 (547)
Q Consensus 406 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 485 (547)
||++..............||+.|+|||++.+..++.++||||||+++|||++|+.||........ .... ....+
T Consensus 185 fg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~-~~~~-~~~~~---- 258 (321)
T 2c30_A 185 FGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQA-MKRL-RDSPP---- 258 (321)
T ss_dssp CTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHH-HHSSC----
T ss_pred eeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHH-hcCCC----
Confidence 99998665443334455799999999999998999999999999999999999999976432221 1111 00000
Q ss_pred hhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 486 EVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
+.. .....+++++.+++.+||+.||++|||+.|+++.
T Consensus 259 ----~~~--------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 259 ----PKL--------KNSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp ----CCC--------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ----CCc--------CccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 0011234568999999999999999999999864
No 40
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=2e-35 Score=301.71 Aligned_cols=216 Identities=16% Similarity=0.184 Sum_probs=170.2
Q ss_pred CCCCCCCccccccccCcc----ceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCC
Q 047800 313 RPSNDANISPVATSCSNE----EFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDI 388 (547)
Q Consensus 313 ~~~~H~nIv~l~~~~~~~----~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dl 388 (547)
+...||||+++++++... ...++||||+ +|+|.+++......+++.+++.++.|++.||+||| +++|+||||
T Consensus 103 ~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDl 178 (364)
T 3op5_A 103 RKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDI 178 (364)
T ss_dssp TTCSCCCSCCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCC
T ss_pred hhccCCCCCeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecC
Confidence 345699999999998765 5589999999 99999999887667999999999999999999999 899999999
Q ss_pred CCCcEEeC--CCCcEEEcccCCcccCCCCCc-------ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCC
Q 047800 389 KANNVLLD--DNMVAHLSDFGIAKTGEDQSM-------TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGK 459 (547)
Q Consensus 389 kp~Nill~--~~~~~kl~Dfg~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~ 459 (547)
||+||+++ .++.+||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+
T Consensus 179 kp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~ 258 (364)
T 3op5_A 179 KASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGH 258 (364)
T ss_dssp CGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSC
T ss_pred CHHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCC
Confidence 99999998 889999999999976543211 112335999999999999999999999999999999999999
Q ss_pred CCCchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHH
Q 047800 460 KPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKII 539 (547)
Q Consensus 460 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~ 539 (547)
.||............ ........+.+.+++.+. ...++.++.+++..||..||++||+++++++.|+.+.
T Consensus 259 ~Pf~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~ 328 (364)
T 3op5_A 259 LPWEDNLKDPKYVRD-SKIRYRENIASLMDKCFP---------AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGL 328 (364)
T ss_dssp CTTGGGTTCHHHHHH-HHHHHHHCHHHHHHHHSC---------TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred CCccccccCHHHHHH-HHHHhhhhHHHHHHHhcc---------cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Confidence 999864332221111 111111112222222111 0122557899999999999999999999999999988
Q ss_pred HHH
Q 047800 540 ESL 542 (547)
Q Consensus 540 ~~~ 542 (547)
++.
T Consensus 329 ~~~ 331 (364)
T 3op5_A 329 KAI 331 (364)
T ss_dssp HHT
T ss_pred HHc
Confidence 764
No 41
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=7.5e-36 Score=303.67 Aligned_cols=250 Identities=21% Similarity=0.231 Sum_probs=183.0
Q ss_pred ccCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCcccc
Q 047800 245 EILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPV 323 (547)
Q Consensus 245 ~~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l 323 (547)
...+.|.++.++......+...++.+............. . ....+..|+. +..++ ||||+++
T Consensus 18 ~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~------~-~~~~~~~E~~il~~l~----------hpnIv~l 80 (361)
T 2yab_A 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRG------V-CREEIEREVSILRQVL----------HPNIITL 80 (361)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSS------B-CHHHHHHHHHHHTTCC----------CTTBCCE
T ss_pred eEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccch------h-HHHHHHHHHHHHHhCC----------CcCCCcE
Confidence 345568888888876655544455442211100000000 0 0011444544 44444 9999999
Q ss_pred ccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCC----
Q 047800 324 ATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNM---- 399 (547)
Q Consensus 324 ~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~---- 399 (547)
++++.+....++||||+++|+|.+++.... .+++.++..++.|++.||+||| +.+|+||||||+||+++.++
T Consensus 81 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~ 156 (361)
T 2yab_A 81 HDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIP 156 (361)
T ss_dssp EEEEECSSEEEEEEECCCSCBHHHHHTTCS-CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSC
T ss_pred EEEEEeCCEEEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCcc
Confidence 999999999999999999999999997754 6999999999999999999999 99999999999999998776
Q ss_pred cEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhhhhc
Q 047800 400 VAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDW 479 (547)
Q Consensus 400 ~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~ 479 (547)
.+||+|||+++...... ......||+.|+|||++.+..++.++||||+||++|+|++|..||......+. ......
T Consensus 157 ~vkl~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~-~~~i~~-- 232 (361)
T 2yab_A 157 HIKLIDFGLAHEIEDGV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET-LANITA-- 232 (361)
T ss_dssp CEEECCCSSCEECCTTC-CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HHHHHT--
T ss_pred CEEEEecCCceEcCCCC-ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHh--
Confidence 79999999998655432 23345799999999999988999999999999999999999999976433221 111100
Q ss_pred cCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHH
Q 047800 480 LPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVT 533 (547)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~ 533 (547)
... .........+++++.+++.+||..||++|||+.|+++
T Consensus 233 ----------~~~----~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 233 ----------VSY----DFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp ----------TCC----CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ----------cCC----CCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 000 0000011223556899999999999999999999985
No 42
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-36 Score=308.20 Aligned_cols=207 Identities=21% Similarity=0.400 Sum_probs=157.6
Q ss_pred CCCCCCccccccccCc-cceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCc
Q 047800 314 PSNDANISPVATSCSN-EEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANN 392 (547)
Q Consensus 314 ~~~H~nIv~l~~~~~~-~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~N 392 (547)
...||||++++++|.+ ++..++||||+++|+|.+++......+++.+++.++.|++.||+||| +++|+||||||+|
T Consensus 146 ~l~hpnIv~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~N 222 (373)
T 3c1x_A 146 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARN 222 (373)
T ss_dssp TCCCTTBCCCCEEECCCSSCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGG
T ss_pred hCCCCCcceEEEEEEcCCCCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchhe
Confidence 3459999999998754 46789999999999999999887667899999999999999999999 9999999999999
Q ss_pred EEeCCCCcEEEcccCCcccCCCCCc----ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCchhhh
Q 047800 393 VLLDDNMVAHLSDFGIAKTGEDQSM----TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFI-GKKPTDEIFN 467 (547)
Q Consensus 393 ill~~~~~~kl~Dfg~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ellt-g~~p~~~~~~ 467 (547)
|+++.++.+||+|||+++....... ......+|+.|+|||++.+..++.++||||||+++|||++ |.+||.....
T Consensus 223 Ill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~ 302 (373)
T 3c1x_A 223 CMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 302 (373)
T ss_dssp EEECTTCCEEECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCS
T ss_pred EEECCCCCEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCH
Confidence 9999999999999999975533211 1223357788999999998899999999999999999999 6777765332
Q ss_pred hhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHHHH
Q 047800 468 EEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESLL 543 (547)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~~~ 543 (547)
.+... . ... .. ....+..++..+.+++.+||+.||++|||+.|+++.|+++..++.
T Consensus 303 ~~~~~-~-~~~-----------~~-------~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~ 358 (373)
T 3c1x_A 303 FDITV-Y-LLQ-----------GR-------RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 358 (373)
T ss_dssp SCHHH-H-HHT-----------TC-------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred HHHHH-H-HHc-----------CC-------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 22111 0 000 00 000112234568999999999999999999999999999987654
No 43
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=6.1e-36 Score=300.51 Aligned_cols=204 Identities=19% Similarity=0.223 Sum_probs=141.4
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
.||||+++++++.++...++||||+++|+|.+++.... .+++.++..++.|++.||+||| +++|+||||||+||++
T Consensus 64 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll 139 (325)
T 3kn6_A 64 GHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKK-HFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLF 139 (325)
T ss_dssp TCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEE
T ss_pred CCCCeeEEEEEEEcCCEEEEEEEccCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEE
Confidence 49999999999999999999999999999999998864 6999999999999999999999 9999999999999999
Q ss_pred CCCC---cEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhh
Q 047800 396 DDNM---VAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTL 472 (547)
Q Consensus 396 ~~~~---~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~ 472 (547)
+.++ .+||+|||+++.............||+.|+|||++.+..++.++||||+||++|||++|+.||.........
T Consensus 140 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~- 218 (325)
T 3kn6_A 140 TDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTC- 218 (325)
T ss_dssp EC----CEEEECCCTTCEECCC----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------C-
T ss_pred ecCCCcccEEEeccccceecCCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCcccccc-
Confidence 7665 899999999986654444444557899999999999999999999999999999999999999764321100
Q ss_pred hhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHH
Q 047800 473 KHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVT 533 (547)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~ 533 (547)
....++..................+++++.+++.+||..||++|||++|+++
T Consensus 219 ---------~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 219 ---------TSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp ---------CCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred ---------ccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 0000111110001111111111234567999999999999999999998874
No 44
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=4.4e-36 Score=306.71 Aligned_cols=203 Identities=25% Similarity=0.344 Sum_probs=163.2
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCC------CCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGN------CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKA 390 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~------~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp 390 (547)
|||||++++++.+....++||||+++|+|.+++.... ..+++.+++.++.|++.||+||| +++|+||||||
T Consensus 133 hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp 209 (367)
T 3l9p_A 133 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAA 209 (367)
T ss_dssp CTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCG
T ss_pred CCCCCeEEEEEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCh
Confidence 9999999999999999999999999999999998642 35899999999999999999999 99999999999
Q ss_pred CcEEeCCCC---cEEEcccCCcccCCCC--CcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCch
Q 047800 391 NNVLLDDNM---VAHLSDFGIAKTGEDQ--SMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFI-GKKPTDE 464 (547)
Q Consensus 391 ~Nill~~~~---~~kl~Dfg~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ellt-g~~p~~~ 464 (547)
+||+++.++ .+||+|||+++..... ........||+.|+|||++.+..++.++|||||||++|||++ |..||..
T Consensus 210 ~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~ 289 (367)
T 3l9p_A 210 RNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 289 (367)
T ss_dssp GGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred hhEEEecCCCCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999999544 5999999999743211 112233467899999999998899999999999999999998 9999976
Q ss_pred hhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHHH
Q 047800 465 IFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESL 542 (547)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~~ 542 (547)
....+.. . . +..... ...+..++..+.+++.+||+.||++|||+.++++.|+.+.+..
T Consensus 290 ~~~~~~~-~-~------------i~~~~~------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 290 KSNQEVL-E-F------------VTSGGR------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp CCHHHHH-H-H------------HHTTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred CCHHHHH-H-H------------HHcCCC------CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 4332211 1 0 000000 0011223456899999999999999999999999999887643
No 45
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6e-35 Score=294.54 Aligned_cols=214 Identities=23% Similarity=0.313 Sum_probs=163.6
Q ss_pred CCCCCccccccccCcc----ceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCC--------C
Q 047800 315 SNDANISPVATSCSNE----EFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSA--------P 382 (547)
Q Consensus 315 ~~H~nIv~l~~~~~~~----~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~--------~ 382 (547)
..||||+++++++... ...++||||+++|+|.++++.. .+++.+++.++.|++.||+||| +. +
T Consensus 88 ~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ 162 (337)
T 3mdy_A 88 MRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPA 162 (337)
T ss_dssp CCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCC
T ss_pred hcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCC
Confidence 4599999999998876 6789999999999999999876 4999999999999999999999 77 9
Q ss_pred ccccCCCCCcEEeCCCCcEEEcccCCcccCCCCCcc----cccccCCCCCCCCCCCCCCCCCcc------hhHHHHHHHH
Q 047800 383 VIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMT----QTQTLATIGYMAPEYGREGRVSAN------GDVYSFGIML 452 (547)
Q Consensus 383 i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~------sDv~s~G~il 452 (547)
|+||||||+||+++.++.+||+|||+++........ .....||+.|+|||++.+..++.+ +|||||||++
T Consensus 163 ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il 242 (337)
T 3mdy_A 163 IAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLIL 242 (337)
T ss_dssp EECSCCCGGGEEECTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHH
T ss_pred EEecccchHHEEECCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHH
Confidence 999999999999999999999999999755432211 123479999999999987766655 9999999999
Q ss_pred HHHHhC----------CCCCchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCC
Q 047800 453 MKTFIG----------KKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESP 522 (547)
Q Consensus 453 ~elltg----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 522 (547)
|||++| +.||............ ..+.+.................++.++.+++.+||+.||
T Consensus 243 ~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP 313 (337)
T 3mdy_A 243 WEVARRCVSGGIVEEYQLPYHDLVPSDPSYED---------MREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNP 313 (337)
T ss_dssp HHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHH---------HHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSG
T ss_pred HHHHhccCcccccccccccHhhhcCCCCchhh---------hHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhCh
Confidence 999999 5555432221111111 011111100001111111224567889999999999999
Q ss_pred CCCCChHHHHHHHHHHHHHH
Q 047800 523 EQRINPKEIVTRLLKIIESL 542 (547)
Q Consensus 523 ~~Rps~~eil~~L~~i~~~~ 542 (547)
++|||+.++++.|+++.++.
T Consensus 314 ~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 314 ASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp GGSCCHHHHHHHHHHHHHTT
T ss_pred hhCCCHHHHHHHHHHHHhhc
Confidence 99999999999999998764
No 46
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=5.1e-35 Score=289.78 Aligned_cols=208 Identities=15% Similarity=0.109 Sum_probs=167.4
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
.|+|++++++++......++||||+ +|+|.+++......+++.++..++.|++.||+||| +++|+||||||+||++
T Consensus 64 ~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~ 139 (298)
T 1csn_A 64 GCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLI 139 (298)
T ss_dssp TCTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEE
T ss_pred cCCCCCeEEeecCCCceeEEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEe
Confidence 3999999999999999999999999 99999999986667999999999999999999999 9999999999999999
Q ss_pred CCCCc-----EEEcccCCcccCCCCCc-------ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCc
Q 047800 396 DDNMV-----AHLSDFGIAKTGEDQSM-------TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTD 463 (547)
Q Consensus 396 ~~~~~-----~kl~Dfg~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~ 463 (547)
+.++. +||+|||+++....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||.
T Consensus 140 ~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 219 (298)
T 1csn_A 140 GRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQ 219 (298)
T ss_dssp CCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTS
T ss_pred ccCCCCCCCeEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcc
Confidence 87765 99999999986543321 1234479999999999999899999999999999999999999997
Q ss_pred hhhhhhh--hhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHH
Q 047800 464 EIFNEEM--TLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIES 541 (547)
Q Consensus 464 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~ 541 (547)
....... ..... ......... ......+++++.+++.+||+.||++|||++++++.|+++.++
T Consensus 220 ~~~~~~~~~~~~~~------------~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~ 284 (298)
T 1csn_A 220 GLKAATNKQKYERI------------GEKKQSTPL---RELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 284 (298)
T ss_dssp SCCSCCHHHHHHHH------------HHHHHHSCH---HHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred hhhccccHHHHHHH------------HhhccCccH---HHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence 6432111 11110 000000000 000112356799999999999999999999999999999876
Q ss_pred H
Q 047800 542 L 542 (547)
Q Consensus 542 ~ 542 (547)
.
T Consensus 285 ~ 285 (298)
T 1csn_A 285 L 285 (298)
T ss_dssp T
T ss_pred c
Confidence 5
No 47
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=6.2e-36 Score=300.61 Aligned_cols=192 Identities=23% Similarity=0.307 Sum_probs=158.7
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~ 396 (547)
||||+++++++...+..++||||+++|+|.+++...+ .+++.++..++.|++.||+||| +++|+||||||+||+++
T Consensus 73 hpnIv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~ 148 (328)
T 3fe3_A 73 HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLD 148 (328)
T ss_dssp CTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEC
T ss_pred CCCEeeEEEEEEECCEEEEEEECCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEc
Confidence 9999999999999999999999999999999997754 6999999999999999999999 99999999999999999
Q ss_pred CCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCC-cchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhh
Q 047800 397 DNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVS-ANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHW 475 (547)
Q Consensus 397 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~ 475 (547)
.++.+||+|||+++...... ......||+.|+|||++.+..+. .++||||+||++|||++|+.||.......... .
T Consensus 149 ~~~~~kl~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~-~- 225 (328)
T 3fe3_A 149 ADMNIKIADFGFSNEFTVGG-KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRE-R- 225 (328)
T ss_dssp TTSCEEECSTTCCGGGSSSC-GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-H-
T ss_pred CCCCEEEeeccCceecCCCC-ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHH-H-
Confidence 99999999999997654332 23445799999999999888764 78999999999999999999997643222111 0
Q ss_pred hhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 476 VNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
+... ... .+..+++++.+++.+||..||++|||++|+++.
T Consensus 226 -----------i~~~----~~~----~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 226 -----------VLRG----KYR----IPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp -----------HHHC----CCC----CCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred -----------HHhC----CCC----CCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0000 000 011224568899999999999999999999763
No 48
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.3e-35 Score=304.74 Aligned_cols=247 Identities=18% Similarity=0.241 Sum_probs=177.9
Q ss_pred cCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCccccc
Q 047800 246 ILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPVA 324 (547)
Q Consensus 246 ~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l~ 324 (547)
..+.|.++.++......+...++.+............ ...+..|.. +..+ .+|||||+++
T Consensus 59 ~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~----------~~~~~~E~~il~~~---------~~hp~Iv~l~ 119 (396)
T 4dc2_A 59 VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDED----------IDWVQTEKHVFEQA---------SNHPFLVGLH 119 (396)
T ss_dssp EEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC--------------CCHHHHHHHHHHHH---------TTCTTBCCEE
T ss_pred EEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHH----------HHHHHHHHHHHHhc---------CCCCCcCeeE
Confidence 4455888988887766655555554321110000000 001333333 3222 1399999999
Q ss_pred cccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCCcEEEc
Q 047800 325 TSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLS 404 (547)
Q Consensus 325 ~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~~~kl~ 404 (547)
+++.++...++||||+++|+|.+++.... .+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+
T Consensus 120 ~~~~~~~~~~lV~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~ 195 (396)
T 4dc2_A 120 SCFQTESRLFFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLT 195 (396)
T ss_dssp EEEECSSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEEC
T ss_pred EEEEECCEEEEEEEcCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEe
Confidence 99999999999999999999999998754 6999999999999999999999 9999999999999999999999999
Q ss_pred ccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhhhhccCchh
Q 047800 405 DFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPISI 484 (547)
Q Consensus 405 Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 484 (547)
|||+++............+||+.|+|||++.+..++.++||||+||++|||++|+.||......+..... ....+
T Consensus 196 DFGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~-----~~~~~ 270 (396)
T 4dc2_A 196 DYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN-----TEDYL 270 (396)
T ss_dssp CCTTCBCCCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------C-----CHHHH
T ss_pred ecceeeecccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchh-----hHHHH
Confidence 9999986443333445568999999999999999999999999999999999999999653221110000 00000
Q ss_pred h-hhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCCh
Q 047800 485 M-EVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINP 528 (547)
Q Consensus 485 ~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~ 528 (547)
. .+..... ..+..++.++.+++.+||+.||++||++
T Consensus 271 ~~~i~~~~~--------~~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 271 FQVILEKQI--------RIPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp HHHHHHCCC--------CCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred HHHHhcccc--------CCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 0 1111100 1112235678999999999999999996
No 49
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.2e-35 Score=299.51 Aligned_cols=194 Identities=21% Similarity=0.300 Sum_probs=160.6
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
.||||+++++++...+..++||||+++|+|.+++.... .+++.++..++.|++.||+||| +++|+||||||+||++
T Consensus 63 ~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll 138 (337)
T 1o6l_A 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLML 138 (337)
T ss_dssp CCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEE
T ss_pred CCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEE
Confidence 49999999999999999999999999999999998654 6899999999999999999999 9999999999999999
Q ss_pred CCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhh
Q 047800 396 DDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHW 475 (547)
Q Consensus 396 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~ 475 (547)
+.++.+||+|||+++.............||+.|+|||++.+..++.++||||+||++|||++|+.||......... ..
T Consensus 139 ~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~-~~- 216 (337)
T 1o6l_A 139 DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF-EL- 216 (337)
T ss_dssp CTTSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-HH-
T ss_pred CCCCCEEEeeccchhhcccCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHH-HH-
Confidence 9999999999999986443333344557999999999999999999999999999999999999999764322211 10
Q ss_pred hhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCC-----ChHHHHHH
Q 047800 476 VNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRI-----NPKEIVTR 534 (547)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp-----s~~eil~~ 534 (547)
+..... ..+..+++++.+++.+||+.||++|| +++|+++.
T Consensus 217 -----------i~~~~~--------~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 217 -----------ILMEEI--------RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp -----------HHHCCC--------CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred -----------HHcCCC--------CCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 000000 00112355689999999999999999 88888754
No 50
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=6.7e-36 Score=295.94 Aligned_cols=204 Identities=23% Similarity=0.402 Sum_probs=161.0
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
.||||+++++++.+++..++||||+++|+|.+++.... .+++.+++.++.|++.||+||| +++|+||||||+||++
T Consensus 69 ~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~ 144 (294)
T 4eqm_A 69 SHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILI 144 (294)
T ss_dssp CBTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEE
T ss_pred CCCCCceEEEeeeeCCeEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEE
Confidence 49999999999999999999999999999999998754 6999999999999999999999 9999999999999999
Q ss_pred CCCCcEEEcccCCcccCCCCCc-ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhh
Q 047800 396 DDNMVAHLSDFGIAKTGEDQSM-TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKH 474 (547)
Q Consensus 396 ~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~ 474 (547)
+.++.+||+|||+++....... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||............
T Consensus 145 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~ 224 (294)
T 4eqm_A 145 DSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKH 224 (294)
T ss_dssp CTTSCEEECCCSSSTTC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHH
T ss_pred CCCCCEEEEeCCCccccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence 9999999999999986543322 223346999999999999989999999999999999999999999764433322111
Q ss_pred hhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCC-ChHHHHHHHHHHH
Q 047800 475 WVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRI-NPKEIVTRLLKII 539 (547)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp-s~~eil~~L~~i~ 539 (547)
... ..+ .........+++.+.+++.+||+.||++|| +++++.+.|+.+.
T Consensus 225 ~~~-~~~---------------~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~ 274 (294)
T 4eqm_A 225 IQD-SVP---------------NVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVL 274 (294)
T ss_dssp HSS-CCC---------------CHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSS
T ss_pred hhc-cCC---------------CcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHH
Confidence 110 000 000011122356689999999999999999 8999988887654
No 51
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=7.2e-36 Score=300.08 Aligned_cols=201 Identities=20% Similarity=0.300 Sum_probs=161.2
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~ 396 (547)
||||+++++++. ++..++||||+++|+|.+++......+++..++.++.|++.||+||| +.+|+||||||+||+++
T Consensus 74 h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~ 149 (325)
T 3kex_A 74 HAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLK 149 (325)
T ss_dssp CTTBCCEEEEEC-BSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEES
T ss_pred CCCcCeEEEEEc-CCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEEC
Confidence 999999999986 45689999999999999999876567999999999999999999999 99999999999999999
Q ss_pred CCCcEEEcccCCcccCCCCCc--ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCchhhhhhhhhh
Q 047800 397 DNMVAHLSDFGIAKTGEDQSM--TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFI-GKKPTDEIFNEEMTLK 473 (547)
Q Consensus 397 ~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ellt-g~~p~~~~~~~~~~~~ 473 (547)
.++.+||+|||+++....... ......++..|+|||++.+..++.++||||+|+++||+++ |+.||.........
T Consensus 150 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~-- 227 (325)
T 3kex_A 150 SPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVP-- 227 (325)
T ss_dssp SSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHH--
T ss_pred CCCeEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHH--
Confidence 999999999999986543321 2234467889999999998899999999999999999999 99999764322211
Q ss_pred hhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHH
Q 047800 474 HWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIES 541 (547)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~ 541 (547)
. .+...... ..+..++.++.+++.+||..||++|||+.++++.|+++.+.
T Consensus 228 ~------------~~~~~~~~------~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 228 D------------LLEKGERL------AQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp H------------HHHTTCBC------CCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred H------------HHHcCCCC------CCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 1 11110000 00111234578899999999999999999999999988654
No 52
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.7e-36 Score=303.81 Aligned_cols=218 Identities=24% Similarity=0.287 Sum_probs=169.9
Q ss_pred HHHHHH-HHHH-HHhhcCCCCCCCCCccccccccCccceeEEEEeccCCCChhHHhhhCCC-------------------
Q 047800 296 FMIVVI-LLIL-RCRKRGKRPSNDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNC------------------- 354 (547)
Q Consensus 296 ~~~~~~-~~~~-~~~~~~~~~~~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~------------------- 354 (547)
+..|+. +..+ + ||||+++++++...+..++||||+++|+|.+++.....
T Consensus 95 ~~~E~~~l~~l~~----------hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 164 (344)
T 1rjb_A 95 LMSELKMMTQLGS----------HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164 (344)
T ss_dssp HHHHHHHHHHHCC----------CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC-----------------
T ss_pred HHHHHHHHHhhcC----------CCCeeeEEEEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhccccccc
Confidence 455555 5555 5 99999999999999999999999999999999986542
Q ss_pred ---CCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCCcEEEcccCCcccCCCCCc--ccccccCCCCCC
Q 047800 355 ---SLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSM--TQTQTLATIGYM 429 (547)
Q Consensus 355 ---~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~ 429 (547)
.+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++........ ......+|+.|+
T Consensus 165 ~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~ 241 (344)
T 1rjb_A 165 DLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWM 241 (344)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHHH---HTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGC
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCcc
Confidence 3789999999999999999999 99999999999999999999999999999975533221 122345788999
Q ss_pred CCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHH
Q 047800 430 APEYGREGRVSANGDVYSFGIMLMKTFI-GKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMS 508 (547)
Q Consensus 430 aPE~~~~~~~~~~sDv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (547)
|||++.+..++.++||||||+++|||++ |..||........... .+...... ..+..+++
T Consensus 242 aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~-------------~~~~~~~~------~~~~~~~~ 302 (344)
T 1rjb_A 242 APESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYK-------------LIQNGFKM------DQPFYATE 302 (344)
T ss_dssp CHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHH-------------HHHTTCCC------CCCTTCCH
T ss_pred CHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHH-------------HHhcCCCC------CCCCCCCH
Confidence 9999988889999999999999999998 9999976433221111 11111000 00112245
Q ss_pred HHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHHHHhh
Q 047800 509 FVFNLAMECTVESPEQRINPKEIVTRLLKIIESLLKK 545 (547)
Q Consensus 509 ~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~~~~~ 545 (547)
++.+++.+||..||++|||+.++++.|+.+.++..++
T Consensus 303 ~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~ 339 (344)
T 1rjb_A 303 EIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEEA 339 (344)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC------
T ss_pred HHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHHH
Confidence 6899999999999999999999999999998776554
No 53
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=5e-36 Score=301.48 Aligned_cols=213 Identities=19% Similarity=0.303 Sum_probs=169.4
Q ss_pred HHHHHH-HHHHHHhhcCCCCCCCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHH
Q 047800 296 FMIVVI-LLILRCRKRGKRPSNDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEY 374 (547)
Q Consensus 296 ~~~~~~-~~~~~~~~~~~~~~~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~ 374 (547)
+..|+. +..++ ||||++++++|.++. .++|+||+++|+|.+++......+++..++.++.|++.||+|
T Consensus 64 ~~~E~~~l~~l~----------h~~iv~~~~~~~~~~-~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~ 132 (327)
T 3poz_A 64 ILDEAYVMASVD----------NPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132 (327)
T ss_dssp HHHHHHHHHHCC----------BTTBCCEEEEEESSS-EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC----------CCCEeEEEEEEecCC-eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 445555 55555 999999999998765 789999999999999999877789999999999999999999
Q ss_pred HHccCCCCccccCCCCCcEEeCCCCcEEEcccCCcccCCCCCc--ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHH
Q 047800 375 MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSM--TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452 (547)
Q Consensus 375 lH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il 452 (547)
|| +++|+||||||+||+++.++.+||+|||+++....... ......+|+.|+|||++.+..++.++|||||||++
T Consensus 133 LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il 209 (327)
T 3poz_A 133 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 209 (327)
T ss_dssp HH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred Hh---hCCeeCCCCChheEEECCCCCEEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHH
Confidence 99 89999999999999999999999999999976443222 12233568899999999999999999999999999
Q ss_pred HHHHh-CCCCCchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHH
Q 047800 453 MKTFI-GKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEI 531 (547)
Q Consensus 453 ~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei 531 (547)
|||++ |+.||........ . ..+...... ..+..++.++.+++.+||+.||++|||+.++
T Consensus 210 ~ellt~g~~p~~~~~~~~~--~------------~~~~~~~~~------~~~~~~~~~~~~li~~~l~~~p~~Rps~~el 269 (327)
T 3poz_A 210 WELMTFGSKPYDGIPASEI--S------------SILEKGERL------PQPPICTIDVYMIMVKCWMIDADSRPKFREL 269 (327)
T ss_dssp HHHHTTSCCTTTTCCGGGH--H------------HHHHTTCCC------CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHH
T ss_pred HHHHhcCCCCccCCCHHHH--H------------HHHHcCCCC------CCCccCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 99999 9999976433221 1 111111000 0111234568999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 047800 532 VTRLLKIIESL 542 (547)
Q Consensus 532 l~~L~~i~~~~ 542 (547)
++.|+++.+..
T Consensus 270 l~~l~~~~~~~ 280 (327)
T 3poz_A 270 IIEFSKMARDP 280 (327)
T ss_dssp HHHHHHHHTSH
T ss_pred HHHHHHHHhhh
Confidence 99999887543
No 54
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=9.4e-36 Score=292.99 Aligned_cols=202 Identities=23% Similarity=0.397 Sum_probs=165.8
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~ 396 (547)
||||+++++++.+.+..++||||+++|+|.+++......+++.++..++.|++.||+||| +++|+|+||||+||+++
T Consensus 78 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~ 154 (283)
T 3gen_A 78 HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVN 154 (283)
T ss_dssp CTTBCCEEEEECSSSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEEC
T ss_pred CCCEeeEEEEEecCCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEc
Confidence 999999999999999999999999999999999875557999999999999999999999 99999999999999999
Q ss_pred CCCcEEEcccCCcccCCCCCc-ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCchhhhhhhhhhh
Q 047800 397 DNMVAHLSDFGIAKTGEDQSM-TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFI-GKKPTDEIFNEEMTLKH 474 (547)
Q Consensus 397 ~~~~~kl~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ellt-g~~p~~~~~~~~~~~~~ 474 (547)
.++.+||+|||+++....... ......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||.......... .
T Consensus 155 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~-~ 233 (283)
T 3gen_A 155 DQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE-H 233 (283)
T ss_dssp TTSCEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH-H
T ss_pred CCCCEEEccccccccccccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHH-H
Confidence 999999999999976543221 1223356788999999998889999999999999999998 999997643322111 1
Q ss_pred hhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHH
Q 047800 475 WVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIES 541 (547)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~ 541 (547)
.. ..... ..+..+++.+.+++.+||+.||++|||+.++++.|+.+.++
T Consensus 234 ~~-------------~~~~~------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 234 IA-------------QGLRL------YRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp HH-------------TTCCC------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred Hh-------------cccCC------CCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 00 00000 00111245688999999999999999999999999998765
No 55
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=3.8e-36 Score=293.42 Aligned_cols=202 Identities=26% Similarity=0.390 Sum_probs=165.1
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~ 396 (547)
||||+++++++.++...++||||+++|+|.+++......+++.+++.++.|++.||+||| +.+++||||||+||+++
T Consensus 62 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~ 138 (268)
T 3sxs_A 62 HPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVD 138 (268)
T ss_dssp CTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEEC
T ss_pred CCCEeeEEEEEccCCceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEEC
Confidence 999999999999999999999999999999999876556999999999999999999999 99999999999999999
Q ss_pred CCCcEEEcccCCcccCCCCCc-ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCchhhhhhhhhhh
Q 047800 397 DNMVAHLSDFGIAKTGEDQSM-TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFI-GKKPTDEIFNEEMTLKH 474 (547)
Q Consensus 397 ~~~~~kl~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ellt-g~~p~~~~~~~~~~~~~ 474 (547)
.++.+||+|||.++....... ......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||............
T Consensus 139 ~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~ 218 (268)
T 3sxs_A 139 RDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKV 218 (268)
T ss_dssp TTCCEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH
T ss_pred CCCCEEEccCccceecchhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHH
Confidence 999999999999986544322 1223346778999999988889999999999999999998 99999764433221110
Q ss_pred hhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHH
Q 047800 475 WVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIES 541 (547)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~ 541 (547)
.... . ...+..+++++.+++.+||+.||++|||+.++++.|+.+.++
T Consensus 219 -~~~~------------~-------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 219 -SQGH------------R-------LYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp -HTTC------------C-------CCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred -HcCC------------C-------CCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 0000 0 000111245689999999999999999999999999987654
No 56
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-35 Score=293.51 Aligned_cols=206 Identities=20% Similarity=0.300 Sum_probs=164.8
Q ss_pred CCCccccccccCcccee-EEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 317 DANISPVATSCSNEEFK-ALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~-~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
||||+++++++.+.+.. ++||||+.+|+|.+++......+++.++..++.|++.||+||| +.+++||||||+||++
T Consensus 81 h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili 157 (298)
T 3pls_A 81 HPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCML 157 (298)
T ss_dssp CTTBCCCCEEECCSSSCCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEE
T ss_pred CCCeeeEEEEEecCCCCcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEE
Confidence 99999999999866554 9999999999999999886667999999999999999999999 8999999999999999
Q ss_pred CCCCcEEEcccCCcccCCCCC----cccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhh
Q 047800 396 DDNMVAHLSDFGIAKTGEDQS----MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMT 471 (547)
Q Consensus 396 ~~~~~~kl~Dfg~a~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~ 471 (547)
+.++.+||+|||+++...... .......+++.|+|||.+.+..++.++||||+|+++|||++|..|+.........
T Consensus 158 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~ 237 (298)
T 3pls_A 158 DESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDL 237 (298)
T ss_dssp CTTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGH
T ss_pred cCCCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHH
Confidence 999999999999997554321 1222346788999999999999999999999999999999966655432222111
Q ss_pred hhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHHHHh
Q 047800 472 LKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESLLK 544 (547)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~~~~ 544 (547)
.... ..... ...+..+++++.+++.+||+.||++|||+.+++++|+++.+++..
T Consensus 238 ~~~~-------------~~~~~------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~ 291 (298)
T 3pls_A 238 THFL-------------AQGRR------LPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLG 291 (298)
T ss_dssp HHHH-------------HTTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCS
T ss_pred HHHh-------------hcCCC------CCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhc
Confidence 1111 00000 001122345689999999999999999999999999999887643
No 57
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=5.9e-35 Score=287.90 Aligned_cols=253 Identities=22% Similarity=0.322 Sum_probs=181.9
Q ss_pred ccCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCcccc
Q 047800 245 EILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPV 323 (547)
Q Consensus 245 ~~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l 323 (547)
...+.|.++.++......+...++.|............. ......+..|+. +..+ +||||+++
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~------~~~~~~~~~E~~~l~~l----------~h~~i~~~ 88 (287)
T 4f0f_A 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEM------IEKFQEFQREVFIMSNL----------NHPNIVKL 88 (287)
T ss_dssp EECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHH------HCCSHHHHHHHHHHTTC----------CCTTBCCE
T ss_pred hccccCCceeEEEEEEcCCceEEEEEEeeccccccchhH------HHHHHHHHHHHHHHHhC----------CCCCchhh
Confidence 345668899998877655554455542211100000000 000001333443 3333 39999999
Q ss_pred ccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCC--ccccCCCCCcEEeCCCCc-
Q 047800 324 ATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAP--VIHCDIKANNVLLDDNMV- 400 (547)
Q Consensus 324 ~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~--i~H~dlkp~Nill~~~~~- 400 (547)
++++.+.. ++||||+++|+|.+++......+++..++.++.|++.||+||| +++ |+||||||+||+++.++.
T Consensus 89 ~~~~~~~~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~ 163 (287)
T 4f0f_A 89 YGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDEN 163 (287)
T ss_dssp EEEETTTT--EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTT
T ss_pred heeecCCC--eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCC
Confidence 99997765 6999999999999999877668999999999999999999999 888 999999999999987776
Q ss_pred ----EEEcccCCcccCCCCCcccccccCCCCCCCCCCCC--CCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhh
Q 047800 401 ----AHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGR--EGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKH 474 (547)
Q Consensus 401 ----~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~ 474 (547)
+||+|||+++..... .....||+.|+|||++. ...++.++||||+|+++|||++|+.||............
T Consensus 164 ~~~~~kl~Dfg~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~ 240 (287)
T 4f0f_A 164 APVCAKVADFGLSQQSVHS---VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFIN 240 (287)
T ss_dssp CSCCEEECCCTTCBCCSSC---EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHH
T ss_pred CceeEEeCCCCcccccccc---ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHH
Confidence 999999999754332 33457999999999984 445789999999999999999999999764433322111
Q ss_pred hhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHH
Q 047800 475 WVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKI 538 (547)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i 538 (547)
.... ... ....+..+++++.+++.+||+.||++|||++|++++|+++
T Consensus 241 ~~~~-----------~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 241 MIRE-----------EGL------RPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HHHH-----------SCC------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred HHhc-----------cCC------CCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 1110 000 0011123356789999999999999999999999999753
No 58
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.2e-35 Score=295.44 Aligned_cols=251 Identities=19% Similarity=0.209 Sum_probs=183.5
Q ss_pred ccCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCcccc
Q 047800 245 EILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPV 323 (547)
Q Consensus 245 ~~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l 323 (547)
...+.|.++.++......+...++.+............ .. ....+..|+. +..++ ||||+++
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~------~~-~~~~~~~E~~~l~~l~----------hp~iv~~ 79 (326)
T 2y0a_A 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRR------GV-SREDIEREVSILKEIQ----------HPNVITL 79 (326)
T ss_dssp EEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSS------SB-CHHHHHHHHHHHHHCC----------CTTBCCE
T ss_pred eEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccc------hh-hHHHHHHHHHHHHhCC----------CCCCCcE
Confidence 34556888888877665544445444211110000000 00 0111445555 55555 9999999
Q ss_pred ccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCC----
Q 047800 324 ATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNM---- 399 (547)
Q Consensus 324 ~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~---- 399 (547)
++++.+....++||||+++|+|.+++.... .+++.++..++.|++.||+||| +.+|+||||||+||+++.++
T Consensus 80 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~ 155 (326)
T 2y0a_A 80 HEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKP 155 (326)
T ss_dssp EEEEECSSEEEEEEECCCSCBHHHHHTTSS-CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSC
T ss_pred EEEEEeCCEEEEEEEcCCCCCHHHHHHhcC-CcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCC
Confidence 999999999999999999999999997654 6999999999999999999999 99999999999999998877
Q ss_pred cEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhhhhc
Q 047800 400 VAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDW 479 (547)
Q Consensus 400 ~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~ 479 (547)
.+||+|||+++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||......+.. .....
T Consensus 156 ~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~-~~~~~-- 231 (326)
T 2y0a_A 156 RIKIIDFGLAHKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL-ANVSA-- 231 (326)
T ss_dssp CEEECCCTTCEECCTTS-CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH-HHHHH--
T ss_pred CEEEEECCCCeECCCCC-ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHH-HHHHh--
Confidence 89999999998664332 233457999999999999889999999999999999999999999764332211 11000
Q ss_pred cCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 480 LPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
....... .....++..+.+++.+||..||++|||+.|+++.
T Consensus 232 ----------~~~~~~~----~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 232 ----------VNYEFED----EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp ----------TCCCCCH----HHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred ----------cCCCcCc----cccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0000000 0011234568999999999999999999999863
No 59
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=8.3e-36 Score=297.64 Aligned_cols=216 Identities=25% Similarity=0.344 Sum_probs=172.9
Q ss_pred HHHHHH-HHHH-HHhhcCCCCCCCCCccccccccCccceeEEEEeccCCCChhHHhhhCCC-----------------CC
Q 047800 296 FMIVVI-LLIL-RCRKRGKRPSNDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNC-----------------SL 356 (547)
Q Consensus 296 ~~~~~~-~~~~-~~~~~~~~~~~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~-----------------~l 356 (547)
+..|+. +..+ + ||||+++++++..++..++||||+++|+|.+++..... .+
T Consensus 73 ~~~E~~~l~~l~~----------h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 142 (313)
T 1t46_A 73 LMSELKVLSYLGN----------HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142 (313)
T ss_dssp HHHHHHHHHHHCC----------CTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCC
T ss_pred HHHHHHHHhhccc----------CCCeeeEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccC
Confidence 555555 5555 4 99999999999999999999999999999999987542 48
Q ss_pred CHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCCcEEEcccCCcccCCCCCc--ccccccCCCCCCCCCCC
Q 047800 357 DIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSM--TQTQTLATIGYMAPEYG 434 (547)
Q Consensus 357 ~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~ 434 (547)
++.+++.++.|++.||+||| +++++||||||+||+++.++.+||+|||+++....... ......+|+.|+|||++
T Consensus 143 ~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 219 (313)
T 1t46_A 143 DLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI 219 (313)
T ss_dssp CHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHh
Confidence 99999999999999999999 99999999999999999999999999999986544322 12233577889999999
Q ss_pred CCCCCCcchhHHHHHHHHHHHHh-CCCCCchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHH
Q 047800 435 REGRVSANGDVYSFGIMLMKTFI-GKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNL 513 (547)
Q Consensus 435 ~~~~~~~~sDv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 513 (547)
.+..++.++||||+|+++|||++ |+.||........... .+...... ..+..++.++.++
T Consensus 220 ~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~-------------~~~~~~~~------~~~~~~~~~l~~l 280 (313)
T 1t46_A 220 FNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYK-------------MIKEGFRM------LSPEHAPAEMYDI 280 (313)
T ss_dssp HHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHH-------------HHHHTCCC------CCCTTSCHHHHHH
T ss_pred cCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHH-------------HhccCCCC------CCcccCCHHHHHH
Confidence 88899999999999999999998 9999976432221111 11111000 0011234568999
Q ss_pred HhhhcCcCCCCCCChHHHHHHHHHHHHHHH
Q 047800 514 AMECTVESPEQRINPKEIVTRLLKIIESLL 543 (547)
Q Consensus 514 i~~cl~~dp~~Rps~~eil~~L~~i~~~~~ 543 (547)
+.+||+.||++|||+.|+++.|+++.++..
T Consensus 281 i~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 310 (313)
T 1t46_A 281 MKTCWDADPLKRPTFKQIVQLIEKQISEST 310 (313)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred HHHHcCCCchhCcCHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999887643
No 60
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=8.5e-36 Score=316.40 Aligned_cols=248 Identities=21% Similarity=0.313 Sum_probs=190.0
Q ss_pred ccCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCcccc
Q 047800 245 EILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPV 323 (547)
Q Consensus 245 ~~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l 323 (547)
...+.|.|+.++.....+....+++|....... . ...+..|+. +..++ |||||++
T Consensus 226 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--~------------~~~~~~E~~~l~~l~----------hpniv~l 281 (495)
T 1opk_A 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--E------------VEEFLKEAAVMKEIK----------HPNLVQL 281 (495)
T ss_dssp EESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS--C------------HHHHHHHHHHHHHCC----------CTTBCCE
T ss_pred eEecCCCCeEEEEEEEcCCCeEEEEEEecCccc--c------------hHHHHHHHHHHHhcC----------CCCEeeE
Confidence 345668899998877766555555553211100 0 111555665 55656 9999999
Q ss_pred ccccCccceeEEEEeccCCCChhHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCCcEE
Q 047800 324 ATSCSNEEFKALILEYKPHGSLEKYLYSGN-CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAH 402 (547)
Q Consensus 324 ~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~~~k 402 (547)
+++|......++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +++|+||||||+|||++.++.+|
T Consensus 282 ~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~k 358 (495)
T 1opk_A 282 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVK 358 (495)
T ss_dssp EEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEE
T ss_pred EEEEecCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEE
Confidence 999999999999999999999999998643 46899999999999999999999 99999999999999999999999
Q ss_pred EcccCCcccCCCCCc-ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCchhhhhhhhhhhhhhhcc
Q 047800 403 LSDFGIAKTGEDQSM-TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFI-GKKPTDEIFNEEMTLKHWVNDWL 480 (547)
Q Consensus 403 l~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 480 (547)
|+|||+++....... ......++..|+|||++.+..++.++|||||||++|||++ |+.||........ .
T Consensus 359 l~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~--~------- 429 (495)
T 1opk_A 359 VADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV--Y------- 429 (495)
T ss_dssp ECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH--H-------
T ss_pred EeecccceeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHH--H-------
Confidence 999999986543321 1223346788999999998889999999999999999998 9999976432221 1
Q ss_pred CchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHH
Q 047800 481 PISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKII 539 (547)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~ 539 (547)
+.+.... +...+..+++++.+++.+||+.||++|||+.++++.|+.+.
T Consensus 430 -----~~~~~~~------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 430 -----ELLEKDY------RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp -----HHHHTTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred -----HHHHcCC------CCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 1111110 01112234567899999999999999999999999998763
No 61
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=7.4e-35 Score=304.14 Aligned_cols=197 Identities=20% Similarity=0.238 Sum_probs=162.0
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~ 396 (547)
|||||++++++.+++..++||||+++|+|.+++.... .+++.++..++.|++.||+||| +++|+||||||+||+++
T Consensus 69 hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~ 144 (444)
T 3soa_A 69 HPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLA 144 (444)
T ss_dssp BTTBCCEEEEEECSSEEEEEECCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEES
T ss_pred CcCCCeEEEEEEECCEEEEEEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEe
Confidence 9999999999999999999999999999999998765 6999999999999999999999 99999999999999998
Q ss_pred ---CCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhh
Q 047800 397 ---DNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLK 473 (547)
Q Consensus 397 ---~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~ 473 (547)
.++.+||+|||+++.............||+.|+|||++.+..++.++||||+||++|+|++|.+||......... .
T Consensus 145 ~~~~~~~vkL~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~-~ 223 (444)
T 3soa_A 145 SKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLY-Q 223 (444)
T ss_dssp BSSTTCCEEECCCSSCBCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-H
T ss_pred ccCCCCcEEEccCceeEEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHH-H
Confidence 567899999999987655444444568999999999999989999999999999999999999999764332211 1
Q ss_pred hhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 474 HWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
..... .... .......+++++.+++.+||..||++|||+.|+++.
T Consensus 224 ~i~~~-------------~~~~---~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 224 QIKAG-------------AYDF---PSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp HHHHT-------------CCCC---CTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHhC-------------CCCC---CccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 11100 0000 000112235668999999999999999999999864
No 62
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=6.1e-36 Score=302.66 Aligned_cols=204 Identities=25% Similarity=0.389 Sum_probs=163.9
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCC-----------------------CCCCHHHHHHHHHHHHHHHH
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGN-----------------------CSLDIFQRLNSMIDVALALE 373 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~-----------------------~~l~~~~~~~i~~~i~~~l~ 373 (547)
||||+++++++.+.+..++||||+++|+|.+++.... ..+++.+++.++.|++.||+
T Consensus 109 hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~ 188 (343)
T 1luf_A 109 NPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMA 188 (343)
T ss_dssp CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEEEccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998642 46899999999999999999
Q ss_pred HHHccCCCCccccCCCCCcEEeCCCCcEEEcccCCcccCCCCC--cccccccCCCCCCCCCCCCCCCCCcchhHHHHHHH
Q 047800 374 YMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQS--MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIM 451 (547)
Q Consensus 374 ~lH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~i 451 (547)
||| +++|+||||||+||+++.++.+||+|||+++...... .......+|+.|+|||++.+..++.++||||||++
T Consensus 189 ~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~i 265 (343)
T 1luf_A 189 YLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVV 265 (343)
T ss_dssp HHH---HTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred HHH---hCCeecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHH
Confidence 999 9999999999999999999999999999997543221 12233467899999999988889999999999999
Q ss_pred HHHHHh-CCCCCchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHH
Q 047800 452 LMKTFI-GKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKE 530 (547)
Q Consensus 452 l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~e 530 (547)
+|||++ |..||......+... . +.+.... ..+..++.++.+++.+||..||++|||+.+
T Consensus 266 l~el~t~g~~p~~~~~~~~~~~-~------------~~~~~~~-------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ 325 (343)
T 1luf_A 266 LWEIFSYGLQPYYGMAHEEVIY-Y------------VRDGNIL-------ACPENCPLELYNLMRLCWSKLPADRPSFCS 325 (343)
T ss_dssp HHHHHTTTCCTTTTSCHHHHHH-H------------HHTTCCC-------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred HHHHHhcCCCcCCCCChHHHHH-H------------HhCCCcC-------CCCCCCCHHHHHHHHHHcccCcccCCCHHH
Confidence 999999 999997643322111 0 0000000 011223456899999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 047800 531 IVTRLLKIIESLL 543 (547)
Q Consensus 531 il~~L~~i~~~~~ 543 (547)
+++.|+++.++..
T Consensus 326 ~~~~L~~~~~~~~ 338 (343)
T 1luf_A 326 IHRILQRMCERAE 338 (343)
T ss_dssp HHHHHHHTTC---
T ss_pred HHHHHHHHHhhhh
Confidence 9999999877654
No 63
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1e-34 Score=289.05 Aligned_cols=212 Identities=26% Similarity=0.408 Sum_probs=167.1
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhC--CCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEE
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSG--NCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nil 394 (547)
||||+++++++.+.+..++||||+++|+|.+++... ...+++..++.++.|++.||+||| +++++|+||||+||+
T Consensus 89 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil 165 (307)
T 2nru_A 89 HENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANIL 165 (307)
T ss_dssp CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEE
T ss_pred CCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEE
Confidence 999999999999999999999999999999999743 246899999999999999999999 999999999999999
Q ss_pred eCCCCcEEEcccCCcccCCCCCc--ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhh
Q 047800 395 LDDNMVAHLSDFGIAKTGEDQSM--TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTL 472 (547)
Q Consensus 395 l~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~ 472 (547)
++.++.+||+|||+++....... ......||+.|+|||++.+ .++.++||||||+++|||++|+.||........ .
T Consensus 166 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~ 243 (307)
T 2nru_A 166 LDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL-L 243 (307)
T ss_dssp ECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB-T
T ss_pred EcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHH-H
Confidence 99999999999999976543221 1233468999999998865 588999999999999999999999976443221 1
Q ss_pred hhhhhhc--cCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHH
Q 047800 473 KHWVNDW--LPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIE 540 (547)
Q Consensus 473 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~ 540 (547)
..+.... ....+.+.+++... ..+..++..+.+++.+||..||++|||+.++++.|+++..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 244 LDIKEEIEDEEKTIEDYIDKKMN-------DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp THHHHHHHTTSCCHHHHSCSSCS-------CCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHHHhhhhhhhhhhhcccccc-------ccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 1111110 01112222222211 1124456789999999999999999999999999998754
No 64
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.3e-35 Score=293.82 Aligned_cols=217 Identities=23% Similarity=0.345 Sum_probs=163.7
Q ss_pred CCCccccccccCcc--ceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEE
Q 047800 317 DANISPVATSCSNE--EFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394 (547)
Q Consensus 317 H~nIv~l~~~~~~~--~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nil 394 (547)
||||+++++++... ...++||||+++|+|.+++......+++.++..++.|++.||+||| +++|+||||||+||+
T Consensus 70 h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil 146 (295)
T 3ugc_A 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNIL 146 (295)
T ss_dssp CTTBCCEEEEECHHHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEE
T ss_pred CCCEeeEEEEEecCCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEE
Confidence 99999999998654 5589999999999999999887667999999999999999999999 999999999999999
Q ss_pred eCCCCcEEEcccCCcccCCCCCc---ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhh
Q 047800 395 LDDNMVAHLSDFGIAKTGEDQSM---TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMT 471 (547)
Q Consensus 395 l~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~ 471 (547)
++.++.+||+|||+++....... ......++..|+|||++.+..++.++||||||+++|||++|..|+.........
T Consensus 147 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~ 226 (295)
T 3ugc_A 147 VENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMR 226 (295)
T ss_dssp EEETTEEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHH
T ss_pred EcCCCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHh
Confidence 99999999999999986543221 122235777899999999889999999999999999999999998764322111
Q ss_pred hhhhhhhccCc-hh-hhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHHH
Q 047800 472 LKHWVNDWLPI-SI-MEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESL 542 (547)
Q Consensus 472 ~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~~ 542 (547)
........ .. ...... ... ......+..+++++.+++.+||+.||++|||+.|++++|+++++++
T Consensus 227 ---~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 227 ---MIGNDKQGQMIVFHLIEL-LKN--NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp ---HHCTTCCTHHHHHHHHHH-HHT--TCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred ---hhcCccccchhHHHHHHH-Hhc--cCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 11110000 00 001100 000 0011112344567999999999999999999999999999998754
No 65
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=6.4e-35 Score=289.51 Aligned_cols=213 Identities=23% Similarity=0.306 Sum_probs=161.1
Q ss_pred CCCCCccccccccCc----cceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHcc-----CCCCccc
Q 047800 315 SNDANISPVATSCSN----EEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFG-----YSAPVIH 385 (547)
Q Consensus 315 ~~H~nIv~l~~~~~~----~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-----~~~~i~H 385 (547)
..||||+++++++.. ....++||||+++|+|.++++.. .+++..++.++.|++.||+|||.. .+++|+|
T Consensus 59 l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH 136 (301)
T 3q4u_A 59 LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAH 136 (301)
T ss_dssp CCCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEEC
T ss_pred ccCcCeeeEEEeeccccCCCceeEEehhhccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeec
Confidence 349999999998654 35689999999999999999764 599999999999999999999932 1578999
Q ss_pred cCCCCCcEEeCCCCcEEEcccCCcccCCCCCcc----cccccCCCCCCCCCCCCCC------CCCcchhHHHHHHHHHHH
Q 047800 386 CDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMT----QTQTLATIGYMAPEYGREG------RVSANGDVYSFGIMLMKT 455 (547)
Q Consensus 386 ~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~sDv~s~G~il~el 455 (547)
|||||+||+++.++.+||+|||+++........ .....||+.|+|||++.+. .++.++|||||||++|||
T Consensus 137 ~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el 216 (301)
T 3q4u_A 137 RDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216 (301)
T ss_dssp SCCCGGGEEECTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCChHhEEEcCCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHH
Confidence 999999999999999999999999754332211 2234799999999999876 455799999999999999
Q ss_pred HhC----------CCCCchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCC
Q 047800 456 FIG----------KKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQR 525 (547)
Q Consensus 456 ltg----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 525 (547)
++| +.||............... ................+..++.++.+++.+||+.||++|
T Consensus 217 ~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 287 (301)
T 3q4u_A 217 ARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRK---------VVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSAR 287 (301)
T ss_dssp HTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHH---------HHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGS
T ss_pred HhhhcCccccccccccccccCCCCcchhhhhH---------HHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhC
Confidence 999 7787654332221111110 000000000000111223456789999999999999999
Q ss_pred CChHHHHHHHHHH
Q 047800 526 INPKEIVTRLLKI 538 (547)
Q Consensus 526 ps~~eil~~L~~i 538 (547)
||+.++++.|+++
T Consensus 288 ps~~~i~~~L~~i 300 (301)
T 3q4u_A 288 LTALRIKKTLTKI 300 (301)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CCHHHHHHHHhcc
Confidence 9999999999876
No 66
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.8e-35 Score=310.30 Aligned_cols=243 Identities=26% Similarity=0.389 Sum_probs=184.0
Q ss_pred cCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCccccc
Q 047800 246 ILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPVA 324 (547)
Q Consensus 246 ~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l~ 324 (547)
..+.|.|+.++.....+.. +++|+.... ... ..+..|+. +..++ |||||+++
T Consensus 200 ~lG~G~fg~V~~~~~~~~~--vavK~~~~~---~~~------------~~~~~E~~~l~~l~----------h~niv~~~ 252 (450)
T 1k9a_A 200 TIGKGEFGDVMLGDYRGNK--VAVKCIKND---ATA------------QAFLAEASVMTQLR----------HSNLVQLL 252 (450)
T ss_dssp EEEECSSEEEEEEEETTEE--EEEEEESSC---TTS------------HHHHHHHHHHHTCC----------CTTBCCEE
T ss_pred eecCcCCeeEEEEEecCCe--EEEEEeCCc---hHH------------HHHHHHHHHHHhcc----------CCCEEEEE
Confidence 3455888888877665543 343322111 000 11555655 55555 99999999
Q ss_pred cccCccc-eeEEEEeccCCCChhHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCCcEE
Q 047800 325 TSCSNEE-FKALILEYKPHGSLEKYLYSGN-CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAH 402 (547)
Q Consensus 325 ~~~~~~~-~~~lv~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~~~k 402 (547)
+++.+.. ..++||||+++|+|.+++...+ ..+++..++.++.|++.||+||| +++|+||||||+||+++.++.+|
T Consensus 253 ~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~k 329 (450)
T 1k9a_A 253 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAK 329 (450)
T ss_dssp EEEECTTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEE
T ss_pred EEEEcCCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEE
Confidence 9987654 7899999999999999998754 34799999999999999999999 99999999999999999999999
Q ss_pred EcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCchhhhhhhhhhhhhhhccC
Q 047800 403 LSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFI-GKKPTDEIFNEEMTLKHWVNDWLP 481 (547)
Q Consensus 403 l~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 481 (547)
|+|||+++..... .....++..|+|||++.+..++.++||||||+++|||++ |+.||......+.. .
T Consensus 330 l~DfG~a~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~-~-------- 397 (450)
T 1k9a_A 330 VSDFGLTKEASST---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV-P-------- 397 (450)
T ss_dssp ECCCTTCEECC---------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHH-H--------
T ss_pred EeeCCCccccccc---ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH-H--------
Confidence 9999999754322 122357889999999999999999999999999999998 99999764332211 0
Q ss_pred chhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHH
Q 047800 482 ISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIES 541 (547)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~ 541 (547)
.+... .+...+..+++++.+++.+||..||++|||+.++++.|+.+...
T Consensus 398 -----~i~~~------~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 398 -----RVEKG------YKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp -----HHHTT------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred -----HHHcC------CCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 01110 01111233456799999999999999999999999999988764
No 67
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.7e-35 Score=291.80 Aligned_cols=250 Identities=21% Similarity=0.307 Sum_probs=189.3
Q ss_pred cCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCccccc
Q 047800 246 ILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPVA 324 (547)
Q Consensus 246 ~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l~ 324 (547)
..+.|.++.++......+...++.+..... ... ...+..|+. +..++ ||||++++
T Consensus 20 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~------------~~~~~~E~~~l~~l~----------h~~i~~~~ 75 (288)
T 3kfa_A 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKED--TME------------VEEFLKEAAVMKEIK----------HPNLVQLL 75 (288)
T ss_dssp ESGGGTTCSEEEEEEGGGTEEEEEEEECSC--STH------------HHHHHHHHHHHHHCC----------CTTBCCEE
T ss_pred ecCCCCceeEEEeEecCCCEEEEEEecCcC--HHH------------HHHHHHHHHHHHhCC----------CCCEeeEE
Confidence 455688888887766655444444421110 000 011444554 55555 99999999
Q ss_pred cccCccceeEEEEeccCCCChhHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCCcEEE
Q 047800 325 TSCSNEEFKALILEYKPHGSLEKYLYSGN-CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHL 403 (547)
Q Consensus 325 ~~~~~~~~~~lv~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~~~kl 403 (547)
+++.+++..++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.+++|+||||+||+++.++.+||
T Consensus 76 ~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l 152 (288)
T 3kfa_A 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKV 152 (288)
T ss_dssp EEECSSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEccCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEE
Confidence 99999999999999999999999998743 46899999999999999999999 899999999999999999999999
Q ss_pred cccCCcccCCCCCc-ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCchhhhhhhhhhhhhhhccC
Q 047800 404 SDFGIAKTGEDQSM-TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFI-GKKPTDEIFNEEMTLKHWVNDWLP 481 (547)
Q Consensus 404 ~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 481 (547)
+|||.+........ ......+|+.|+|||++.+..++.++||||+|+++|+|++ |..||.........
T Consensus 153 ~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~---------- 222 (288)
T 3kfa_A 153 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY---------- 222 (288)
T ss_dssp CCCCGGGTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH----------
T ss_pred ccCccceeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH----------
Confidence 99999986554322 2233356888999999998899999999999999999999 99998764322211
Q ss_pred chhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHHH
Q 047800 482 ISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESL 542 (547)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~~ 542 (547)
+.+...... ..+..+++++.+++.+||..||++|||+.++++.|+.+.++.
T Consensus 223 ----~~~~~~~~~------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~ 273 (288)
T 3kfa_A 223 ----ELLEKDYRM------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273 (288)
T ss_dssp ----HHHHTTCCC------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ----HHHhccCCC------CCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence 111111000 011223456899999999999999999999999999987764
No 68
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.3e-35 Score=299.41 Aligned_cols=203 Identities=26% Similarity=0.395 Sum_probs=166.7
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCC---------------CCCCHHHHHHHHHHHHHHHHHHHccCCC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGN---------------CSLDIFQRLNSMIDVALALEYMHFGYSA 381 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~i~~~l~~lH~~~~~ 381 (547)
|||||++++++.+++..++||||+++|+|.+++.... ..+++.+++.++.|++.||+||| ++
T Consensus 134 hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~ 210 (382)
T 3tt0_A 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SK 210 (382)
T ss_dssp CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HT
T ss_pred CchhhhheeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hC
Confidence 9999999999999999999999999999999998753 35899999999999999999999 99
Q ss_pred CccccCCCCCcEEeCCCCcEEEcccCCcccCCCCCc--ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHh-C
Q 047800 382 PVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSM--TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFI-G 458 (547)
Q Consensus 382 ~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ellt-g 458 (547)
+|+||||||+||+++.++.+||+|||+++....... ......+|+.|+|||++.+..++.++|||||||++|||++ |
T Consensus 211 ~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g 290 (382)
T 3tt0_A 211 KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 290 (382)
T ss_dssp TCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred CEecCCCCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999986543221 2233457889999999999899999999999999999999 9
Q ss_pred CCCCchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHH
Q 047800 459 KKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKI 538 (547)
Q Consensus 459 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i 538 (547)
..||......+.. .. +...... ..+..++.++.+++.+||+.||++|||+.|+++.|+++
T Consensus 291 ~~p~~~~~~~~~~-~~-------------~~~~~~~------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 350 (382)
T 3tt0_A 291 GSPYPGVPVEELF-KL-------------LKEGHRM------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350 (382)
T ss_dssp CCSSTTCCHHHHH-HH-------------HHTTCCC------CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHH-HH-------------HHcCCCC------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 9999764322211 10 1100000 00112345689999999999999999999999999999
Q ss_pred HHHH
Q 047800 539 IESL 542 (547)
Q Consensus 539 ~~~~ 542 (547)
....
T Consensus 351 ~~~~ 354 (382)
T 3tt0_A 351 VALT 354 (382)
T ss_dssp HHHS
T ss_pred HHHH
Confidence 8654
No 69
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=2.3e-35 Score=301.80 Aligned_cols=246 Identities=19% Similarity=0.219 Sum_probs=178.8
Q ss_pred ccCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCcccc
Q 047800 245 EILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPV 323 (547)
Q Consensus 245 ~~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l 323 (547)
...+.|.++.++......+...++.+..... . ......+..|+. +..++ ||||+++
T Consensus 95 ~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~---~----------~~~~~~~~~E~~~l~~l~----------hpnIv~~ 151 (373)
T 2x4f_A 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTR---G----------MKDKEEVKNEISVMNQLD----------HANLIQL 151 (373)
T ss_dssp EECC-----CEEEEEETTTCCEEEEEEEECC---S----------HHHHHHHHHHHHHHTTCC----------CTTBCCE
T ss_pred eEEecCcCEEEEEEEEcCCCcEEEEEEEccc---c----------cccHHHHHHHHHHHHhCC----------CCCCCeE
Confidence 3466788999887665544444444321110 0 000111444444 43334 9999999
Q ss_pred ccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe--CCCCcE
Q 047800 324 ATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL--DDNMVA 401 (547)
Q Consensus 324 ~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill--~~~~~~ 401 (547)
++++.+.+..++||||+++|+|.+++......+++.++..++.|++.||+||| +.+|+||||||+||++ +.++.+
T Consensus 152 ~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~ 228 (373)
T 2x4f_A 152 YDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQI 228 (373)
T ss_dssp EEEEECSSEEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEE
T ss_pred EEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcE
Confidence 99999999999999999999999999876667999999999999999999999 9999999999999999 667899
Q ss_pred EEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhhhhccC
Q 047800 402 HLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWLP 481 (547)
Q Consensus 402 kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 481 (547)
||+|||+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+. +..+...
T Consensus 229 kl~DFG~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-~~~i~~~--- 303 (373)
T 2x4f_A 229 KIIDFGLARRYKPREK-LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAET-LNNILAC--- 303 (373)
T ss_dssp EECCCSSCEECCTTCB-CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHHT---
T ss_pred EEEeCCCceecCCccc-cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhc---
Confidence 9999999987654322 2334699999999999988899999999999999999999999976433221 1111110
Q ss_pred chhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 482 ISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
...... .....+++++.+++.+||..||++|||+.|+++.
T Consensus 304 ---------~~~~~~----~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 304 ---------RWDLED----EEFQDISEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp ---------CCCSCS----GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ---------cCCCCh----hhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000 0011234568999999999999999999999874
No 70
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=3e-35 Score=295.17 Aligned_cols=245 Identities=20% Similarity=0.239 Sum_probs=180.5
Q ss_pred cCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCccccc
Q 047800 246 ILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPVA 324 (547)
Q Consensus 246 ~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l~ 324 (547)
..+.|.++.++......+...++.+........... ..+..|+. +..++ ||||++++
T Consensus 14 ~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~------------~~~~~E~~~l~~l~----------hpnIv~~~ 71 (323)
T 3tki_A 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP------------ENIKKEICINKMLN----------HENVVKFY 71 (323)
T ss_dssp EEEEETTEEEEEEEETTTCCEEEEEEEECC-------------------CHHHHHHHHHHCC----------CTTBCCEE
T ss_pred EEecCCCEEEEEEEECCCCcEEEEEEEEcccccchH------------HHHHHHHHHHHhCC----------CCCCCeEE
Confidence 345577888887655544444444421100000000 01444554 44445 99999999
Q ss_pred cccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCCcEEEc
Q 047800 325 TSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLS 404 (547)
Q Consensus 325 ~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~~~kl~ 404 (547)
+++.+++..++||||+++|+|.+++.... .+++.++..++.|++.||+||| +++|+||||||+||+++.++.+||+
T Consensus 72 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~ 147 (323)
T 3tki_A 72 GHRREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKIS 147 (323)
T ss_dssp EEEECSSEEEEEEECCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEEC
T ss_pred EEEecCCeEEEEEEcCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEE
Confidence 99999999999999999999999998654 6999999999999999999999 9999999999999999999999999
Q ss_pred ccCCcccCCCC--CcccccccCCCCCCCCCCCCCCCC-CcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhhhhccC
Q 047800 405 DFGIAKTGEDQ--SMTQTQTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWLP 481 (547)
Q Consensus 405 Dfg~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 481 (547)
|||+++..... ........||+.|+|||++.+..+ +.++||||+||++|||++|+.||............+......
T Consensus 148 Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~ 227 (323)
T 3tki_A 148 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY 227 (323)
T ss_dssp CCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTT
T ss_pred EeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhccccc
Confidence 99999754322 122334579999999999987775 778999999999999999999997644333222222111000
Q ss_pred chhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 482 ISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
......++.++.+++.+||..||++|||+.|+++.
T Consensus 228 ------------------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 228 ------------------LNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp ------------------STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ------------------CCccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 00012234568899999999999999999999764
No 71
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1.5e-35 Score=289.63 Aligned_cols=196 Identities=24% Similarity=0.391 Sum_probs=152.3
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCC---ccccCCCCCcE
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAP---VIHCDIKANNV 393 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~---i~H~dlkp~Ni 393 (547)
||||+++++++.+++..++||||+++|+|.+++... .+++..+..++.|++.||+||| +++ ++||||||+||
T Consensus 65 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i~H~dikp~Ni 139 (271)
T 3dtc_A 65 HPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGK--RIPPDILVNWAVQIARGMNYLH---DEAIVPIIHRDLKSSNI 139 (271)
T ss_dssp CTTBCCEEEEECCC--CEEEEECCTTEEHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHH---HSSSSCCCCSCCSGGGE
T ss_pred CCCEeeEEEEEecCCceEEEEEcCCCCCHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH---hCCCCceeecCCchHHE
Confidence 999999999999999999999999999999999754 5999999999999999999999 777 99999999999
Q ss_pred EeCC--------CCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchh
Q 047800 394 LLDD--------NMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEI 465 (547)
Q Consensus 394 ll~~--------~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~ 465 (547)
+++. ++.+|++|||.++...... .....||+.|+|||++.+..++.++||||+|+++|||++|+.||...
T Consensus 140 l~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 217 (271)
T 3dtc_A 140 LILQKVENGDLSNKILKITDFGLAREWHRTT--KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGI 217 (271)
T ss_dssp EESSCCSSSCCSSCCEEECCCCC---------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTS
T ss_pred EEecccccccccCcceEEccCCccccccccc--ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 9986 6789999999997654332 22346899999999999888999999999999999999999999764
Q ss_pred hhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHH
Q 047800 466 FNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKI 538 (547)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i 538 (547)
............. . ....+..+++++.+++.+||+.||++|||+.|+++.|+++
T Consensus 218 ~~~~~~~~~~~~~-------------~------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 218 DGLAVAYGVAMNK-------------L------ALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp CHHHHHHHHHTSC-------------C------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred CHHHHHHhhhcCC-------------C------CCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 3322211110000 0 0001122345689999999999999999999999999754
No 72
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=7.2e-35 Score=290.92 Aligned_cols=211 Identities=18% Similarity=0.259 Sum_probs=160.4
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~ 396 (547)
||||+++++++.++...++||||+++ +|.+++......+++.++..++.|++.||+||| +.+|+||||||+||+++
T Consensus 78 hp~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~ 153 (311)
T 3niz_A 78 HPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLIN 153 (311)
T ss_dssp CTTBCCEEEEECCSSCEEEEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEC
T ss_pred CCCEeeeeeEEccCCEEEEEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEEC
Confidence 99999999999999999999999974 899998877667999999999999999999999 99999999999999999
Q ss_pred CCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhh
Q 047800 397 DNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHW 475 (547)
Q Consensus 397 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~ 475 (547)
.++.+||+|||+++.............||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+.. ...
T Consensus 154 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~-~~i 232 (311)
T 3niz_A 154 SDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQL-PKI 232 (311)
T ss_dssp TTCCEEECCCTTCEETTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHH-HHH
T ss_pred CCCCEEEccCcCceecCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHH-HHH
Confidence 9999999999999876544444445578999999999876 45899999999999999999999999765443321 111
Q ss_pred hh---hccCchhhhhhhh------hh--ccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHH
Q 047800 476 VN---DWLPISIMEVIDA------NL--LSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVT 533 (547)
Q Consensus 476 ~~---~~~~~~~~~~~~~------~~--~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~ 533 (547)
.. ...+.......+. .. ....... ...+.+++++.+++.+||..||++|||++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 233 FSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWS-SIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHH-HHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHCCCChHHhhhhhccchhhhcccccccCCcHH-HhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 11 1111100000000 00 0000000 001223457899999999999999999999986
No 73
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.6e-35 Score=293.62 Aligned_cols=204 Identities=21% Similarity=0.396 Sum_probs=162.0
Q ss_pred CCCccccccccC-ccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 317 DANISPVATSCS-NEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 317 H~nIv~l~~~~~-~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
||||++++++|. .++..++||||+++|+|.+++......+++.++..++.|++.||+||| +++++||||||+||++
T Consensus 85 h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~ 161 (298)
T 3f66_A 85 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCML 161 (298)
T ss_dssp CTTBCCCCEEECCSSSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEE
T ss_pred CCCEeeeeeEEEcCCCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEE
Confidence 999999999864 556789999999999999999876667899999999999999999999 9999999999999999
Q ss_pred CCCCcEEEcccCCcccCCCCCc----ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCchhhhhhh
Q 047800 396 DDNMVAHLSDFGIAKTGEDQSM----TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFI-GKKPTDEIFNEEM 470 (547)
Q Consensus 396 ~~~~~~kl~Dfg~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ellt-g~~p~~~~~~~~~ 470 (547)
+.++.+||+|||+++....... ......+|+.|+|||.+.+..++.++||||+|+++||+++ |.+||......+.
T Consensus 162 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~ 241 (298)
T 3f66_A 162 DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI 241 (298)
T ss_dssp CTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTH
T ss_pred CCCCCEEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHH
Confidence 9999999999999976543221 1223457789999999998899999999999999999999 5555544322221
Q ss_pred hhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHHHH
Q 047800 471 TLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESLL 543 (547)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~~~ 543 (547)
........ . ...+..+++.+.+++.+||+.||++|||+.|++++|+++.+++.
T Consensus 242 -~~~~~~~~-------------~------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 294 (298)
T 3f66_A 242 -TVYLLQGR-------------R------LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294 (298)
T ss_dssp -HHHHHTTC-------------C------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred -HHHHhcCC-------------C------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 11111000 0 00011224568999999999999999999999999999987654
No 74
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=4.4e-35 Score=298.56 Aligned_cols=196 Identities=19% Similarity=0.271 Sum_probs=158.7
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~ 396 (547)
||||+++++++.+++..++||||+++|+|.+++.... .+++.++..++.|++.||+||| +++|+||||||+||+++
T Consensus 87 hpnIv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~ 162 (362)
T 2bdw_A 87 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLA 162 (362)
T ss_dssp CTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEES
T ss_pred CCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEe
Confidence 9999999999999999999999999999999998754 6899999999999999999999 99999999999999997
Q ss_pred CC---CcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhh
Q 047800 397 DN---MVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLK 473 (547)
Q Consensus 397 ~~---~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~ 473 (547)
.+ +.+||+|||+++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||......... .
T Consensus 163 ~~~~~~~~kl~DfG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~-~ 240 (362)
T 2bdw_A 163 SKAKGAAVKLADFGLAIEVNDSE-AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLY-A 240 (362)
T ss_dssp CSSTTCCEEECCCTTCBCCTTCC-SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-H
T ss_pred cCCCCCCEEEeecCcceEecCCc-ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHH-H
Confidence 64 459999999998665332 233457999999999999989999999999999999999999999764322211 1
Q ss_pred hhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 474 HWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
..... ....+ ......+++++.+++.+||..||++|||+.++++.
T Consensus 241 ~i~~~-------------~~~~~---~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 241 QIKAG-------------AYDYP---SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp HHHHT-------------CCCCC---TTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred HHHhC-------------CCCCC---cccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 11000 00000 00112235568999999999999999999999865
No 75
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=4.8e-35 Score=295.32 Aligned_cols=226 Identities=18% Similarity=0.234 Sum_probs=163.5
Q ss_pred CCCCCCcccccccc-----CccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCC-------
Q 047800 314 PSNDANISPVATSC-----SNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSA------- 381 (547)
Q Consensus 314 ~~~H~nIv~l~~~~-----~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~------- 381 (547)
...||||+++++++ ......++||||+++|+|.+++.... .++..+..++.|++.||+||| +.
T Consensus 63 ~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~ 137 (336)
T 3g2f_A 63 LMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLH---TELPRGDHY 137 (336)
T ss_dssp TCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHH---CCBCCGGGC
T ss_pred hccCcchhhheecccccccCCCceEEEEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHH---hhhcccccc
Confidence 35699999999743 33456789999999999999998765 689999999999999999999 88
Q ss_pred --CccccCCCCCcEEeCCCCcEEEcccCCcccCCCCC--------cccccccCCCCCCCCCCCCC-------CCCCcchh
Q 047800 382 --PVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQS--------MTQTQTLATIGYMAPEYGRE-------GRVSANGD 444 (547)
Q Consensus 382 --~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~~-------~~~~~~sD 444 (547)
+|+||||||+||+++.++.+||+|||+++...... .......||+.|+|||++.+ ..++.++|
T Consensus 138 ~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~D 217 (336)
T 3g2f_A 138 KPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVD 217 (336)
T ss_dssp BCCEECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHH
T ss_pred ccceeecccccceEEEcCCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccc
Confidence 99999999999999999999999999997654321 11223469999999999987 35678899
Q ss_pred HHHHHHHHHHHHhCCCCCchhhhhhhhhhhhhhhcc-Cc---hhhhhhhhhh-ccchhhhhhcHHHHHHHHHHHHhhhcC
Q 047800 445 VYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWL-PI---SIMEVIDANL-LSREDIHFVAKEQFMSFVFNLAMECTV 519 (547)
Q Consensus 445 v~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~ 519 (547)
||||||++|||++|..||............+..... .. .....+.... .............++.++.+++.+||+
T Consensus 218 iwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 297 (336)
T 3g2f_A 218 MYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWD 297 (336)
T ss_dssp HHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSC
T ss_pred hHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhc
Confidence 999999999999998776443221111111100000 00 0011111000 000011111123356679999999999
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHh
Q 047800 520 ESPEQRINPKEIVTRLLKIIESLLK 544 (547)
Q Consensus 520 ~dp~~Rps~~eil~~L~~i~~~~~~ 544 (547)
.||++|||+.|++++|+++.+.+.+
T Consensus 298 ~dP~~Rps~~e~l~~L~~ll~~~~~ 322 (336)
T 3g2f_A 298 QDAEARLTAQXAEERMAELMMIWER 322 (336)
T ss_dssp SSGGGSCCHHHHHHHHHHHHHCCCC
T ss_pred CChhhCcchHHHHHHHHHHHHHHHh
Confidence 9999999999999999999887654
No 76
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.5e-35 Score=296.07 Aligned_cols=203 Identities=26% Similarity=0.426 Sum_probs=161.0
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~ 396 (547)
||||+++++++...+..++||||+++|+|.+++......+++.+++.++.|++.||+||| +++|+||||||+||+++
T Consensus 105 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~ 181 (333)
T 1mqb_A 105 HHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVN 181 (333)
T ss_dssp CTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEC
T ss_pred CCCCCcEEEEEecCCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEEC
Confidence 999999999999999999999999999999999887667999999999999999999999 89999999999999999
Q ss_pred CCCcEEEcccCCcccCCCCCc---ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCchhhhhhhhh
Q 047800 397 DNMVAHLSDFGIAKTGEDQSM---TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFI-GKKPTDEIFNEEMTL 472 (547)
Q Consensus 397 ~~~~~kl~Dfg~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ellt-g~~p~~~~~~~~~~~ 472 (547)
.++.+||+|||+++....... ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||......+..
T Consensus 182 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~- 260 (333)
T 1mqb_A 182 SNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVM- 260 (333)
T ss_dssp TTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH-
T ss_pred CCCcEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHH-
Confidence 999999999999976543221 1122346788999999998899999999999999999998 99999764332211
Q ss_pred hhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHHH
Q 047800 473 KHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESL 542 (547)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~~ 542 (547)
... ..... ...+..++.++.+++.+||+.||++||++.++++.|+++.+..
T Consensus 261 ~~~-------------~~~~~------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 311 (333)
T 1mqb_A 261 KAI-------------NDGFR------LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 311 (333)
T ss_dssp HHH-------------HTTCC------CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred HHH-------------HCCCc------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 100 00000 0011123456899999999999999999999999999987653
No 77
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=3.7e-35 Score=296.09 Aligned_cols=203 Identities=26% Similarity=0.400 Sum_probs=165.5
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCC---------------CCCCHHHHHHHHHHHHHHHHHHHccCCC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGN---------------CSLDIFQRLNSMIDVALALEYMHFGYSA 381 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~i~~~l~~lH~~~~~ 381 (547)
||||+++++++.+.+..++||||+++|+|.+++.... ..+++.+++.++.|++.||+||| ++
T Consensus 100 hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~ 176 (334)
T 2pvf_A 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQ 176 (334)
T ss_dssp CTTBCCEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HT
T ss_pred CCCEeeEEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hC
Confidence 9999999999999999999999999999999998653 24899999999999999999999 99
Q ss_pred CccccCCCCCcEEeCCCCcEEEcccCCcccCCCCCc--ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHh-C
Q 047800 382 PVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSM--TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFI-G 458 (547)
Q Consensus 382 ~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ellt-g 458 (547)
+|+||||||+||+++.++.+||+|||+++....... ......+|+.|+|||++.+..++.++||||+|+++|||++ |
T Consensus 177 ~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g 256 (334)
T 2pvf_A 177 KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256 (334)
T ss_dssp TEECSCCSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTS
T ss_pred CeeCCCCccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999986543321 1223356788999999988889999999999999999999 9
Q ss_pred CCCCchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHH
Q 047800 459 KKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKI 538 (547)
Q Consensus 459 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i 538 (547)
+.||......+.. .. +...... ..+..++.++.+++.+||..||++|||+.|+++.|+++
T Consensus 257 ~~p~~~~~~~~~~-~~-------------~~~~~~~------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l 316 (334)
T 2pvf_A 257 GSPYPGIPVEELF-KL-------------LKEGHRM------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316 (334)
T ss_dssp CCSSTTCCHHHHH-HH-------------HHHTCCC------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCcCcCCHHHHH-HH-------------HhcCCCC------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 9999764322211 00 0000000 01112345689999999999999999999999999999
Q ss_pred HHHH
Q 047800 539 IESL 542 (547)
Q Consensus 539 ~~~~ 542 (547)
.+..
T Consensus 317 ~~~~ 320 (334)
T 2pvf_A 317 LTLT 320 (334)
T ss_dssp HHHH
T ss_pred Hhcc
Confidence 8765
No 78
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.3e-35 Score=319.27 Aligned_cols=203 Identities=21% Similarity=0.347 Sum_probs=163.1
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~ 396 (547)
|||||+++++|.. +..++||||+++|+|.+++......+++.++..++.|++.||+||| +++|+||||||+|||++
T Consensus 395 hpniv~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~ 470 (613)
T 2ozo_A 395 NPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLV 470 (613)
T ss_dssp CTTBCCEEEEEES-SSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEE
T ss_pred CCCEeeEEEEecc-CCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEc
Confidence 9999999999976 4589999999999999999876667999999999999999999999 99999999999999999
Q ss_pred CCCcEEEcccCCcccCCCCCcc---cccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCchhhhhhhhh
Q 047800 397 DNMVAHLSDFGIAKTGEDQSMT---QTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFI-GKKPTDEIFNEEMTL 472 (547)
Q Consensus 397 ~~~~~kl~Dfg~a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ellt-g~~p~~~~~~~~~~~ 472 (547)
.++.+||+|||+++........ .....+++.|+|||++.+..++.++|||||||++|||++ |+.||......+..
T Consensus 471 ~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~- 549 (613)
T 2ozo_A 471 NRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM- 549 (613)
T ss_dssp ETTEEEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHH-
T ss_pred CCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH-
Confidence 9999999999999865432211 112245688999999998899999999999999999998 99999764433211
Q ss_pred hhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHHHH
Q 047800 473 KHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESLL 543 (547)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~~~ 543 (547)
.. +.... ....+..+++++.+++.+||..||++||++.++++.|+.+..+..
T Consensus 550 -~~------------i~~~~------~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~ 601 (613)
T 2ozo_A 550 -AF------------IEQGK------RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 601 (613)
T ss_dssp -HH------------HHTTC------CCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHS
T ss_pred -HH------------HHcCC------CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhc
Confidence 11 11100 011112345679999999999999999999999999999877653
No 79
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=2.5e-35 Score=295.19 Aligned_cols=217 Identities=22% Similarity=0.331 Sum_probs=169.4
Q ss_pred CCCccccccccCcc--ceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEE
Q 047800 317 DANISPVATSCSNE--EFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394 (547)
Q Consensus 317 H~nIv~l~~~~~~~--~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nil 394 (547)
||||+++++++.+. ...++||||+++|+|.+++.... +++.+++.++.|++.||+||| +.+|+|+||||+||+
T Consensus 92 h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil 166 (318)
T 3lxp_A 92 HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVL 166 (318)
T ss_dssp CTTBCCEEEEEEETTTTEEEEEECCCTTCBHHHHGGGSC--CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEE
T ss_pred CcchhhEEEEEecCCCceEEEEEecccCCcHHHHHhhCC--CCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEE
Confidence 99999999999864 67899999999999999998764 899999999999999999999 999999999999999
Q ss_pred eCCCCcEEEcccCCcccCCCCCc---ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhh
Q 047800 395 LDDNMVAHLSDFGIAKTGEDQSM---TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMT 471 (547)
Q Consensus 395 l~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~ 471 (547)
++.++.+||+|||+++....... ......+|..|+|||++.+..++.++||||+|+++|||++|+.||.........
T Consensus 167 ~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~ 246 (318)
T 3lxp_A 167 LDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLE 246 (318)
T ss_dssp ECTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHH
T ss_pred EcCCCCEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhh
Confidence 99999999999999986654321 123346788899999999888999999999999999999999998764332221
Q ss_pred hhhhhhhcc-CchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHHHHh
Q 047800 472 LKHWVNDWL-PISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESLLK 544 (547)
Q Consensus 472 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~~~~ 544 (547)
...+..... .....+.+..... ...+..++.++.+++.+||+.||++|||+.|+++.|+++.+++..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~ 314 (318)
T 3lxp_A 247 LIGIAQGQMTVLRLTELLERGER------LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQG 314 (318)
T ss_dssp HHCSCCHHHHHHHHHHHHHTTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC
T ss_pred hhcccccchhHHHHHHHHhcccC------CCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhcc
Confidence 111111000 0011111111111 111233456799999999999999999999999999999988754
No 80
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=6e-35 Score=292.34 Aligned_cols=262 Identities=19% Similarity=0.221 Sum_probs=176.0
Q ss_pred cCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCccccc
Q 047800 246 ILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPVA 324 (547)
Q Consensus 246 ~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l~ 324 (547)
..+.|.++.++......+...++.+........... ..+..|+. +..++ ||||++++
T Consensus 12 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~------------~~~~~E~~~l~~l~----------hp~iv~~~ 69 (317)
T 2pmi_A 12 KLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTP------------STAIREISLMKELK----------HENIVRLY 69 (317)
T ss_dssp -------CEEEEEECSSSCCEEEEEEEECCSTTCSC------------HHHHHHHHHHTTCC----------BTTBCCEE
T ss_pred EECCCCCEEEEEEEECCCCcEEEEEEeecccccccH------------HHHHHHHHHHHhcC----------CCCcceEE
Confidence 345578888887665544444444421110000000 11334444 44444 99999999
Q ss_pred cccCccceeEEEEeccCCCChhHHhhhCC-----CCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCC
Q 047800 325 TSCSNEEFKALILEYKPHGSLEKYLYSGN-----CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNM 399 (547)
Q Consensus 325 ~~~~~~~~~~lv~ey~~~gsL~~~l~~~~-----~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~ 399 (547)
+++..++..++||||++ |+|.+++.... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++
T Consensus 70 ~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~ 145 (317)
T 2pmi_A 70 DVIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRG 145 (317)
T ss_dssp EEECCTTEEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTC
T ss_pred EEEEECCeEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCC
Confidence 99999999999999997 59999987532 35899999999999999999999 99999999999999999999
Q ss_pred cEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCC-CCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhhhh
Q 047800 400 VAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVND 478 (547)
Q Consensus 400 ~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~ 478 (547)
.+||+|||+++.............||+.|+|||++.+. .++.++||||+||++|||++|+.||......+. +......
T Consensus 146 ~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~i~~~ 224 (317)
T 2pmi_A 146 QLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQ-LKLIFDI 224 (317)
T ss_dssp CEEECCCSSCEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHH
T ss_pred CEEECcCccceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHH
Confidence 99999999998665433333445789999999999764 589999999999999999999999976543322 1111110
Q ss_pred --ccCchhhhhhh------hhhccc------hhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 479 --WLPISIMEVID------ANLLSR------EDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 479 --~~~~~~~~~~~------~~~~~~------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
..+......+. +..... ..........++.++.+++.+||+.||++|||+.|+++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 225 MGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp HCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 00000000000 000000 000000111234578999999999999999999999753
No 81
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.8e-35 Score=293.74 Aligned_cols=214 Identities=20% Similarity=0.343 Sum_probs=164.8
Q ss_pred CCCccccccccCcc--ceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEE
Q 047800 317 DANISPVATSCSNE--EFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394 (547)
Q Consensus 317 H~nIv~l~~~~~~~--~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nil 394 (547)
||||+++++++... ...++||||+++|+|.+++......+++.+++.++.|++.||+||| +++|+|+||||+||+
T Consensus 82 h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil 158 (302)
T 4e5w_A 82 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVL 158 (302)
T ss_dssp CTTBCCEEEEEEC---CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEE
T ss_pred CCCeeeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEE
Confidence 99999999999876 6689999999999999999766567999999999999999999999 999999999999999
Q ss_pred eCCCCcEEEcccCCcccCCCCCc---ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhh
Q 047800 395 LDDNMVAHLSDFGIAKTGEDQSM---TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMT 471 (547)
Q Consensus 395 l~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~ 471 (547)
++.++.+||+|||+++....... ......||..|+|||++.+..++.++||||+|+++|||++|..|+.........
T Consensus 159 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~ 238 (302)
T 4e5w_A 159 VESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLK 238 (302)
T ss_dssp EEETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHH
T ss_pred EcCCCCEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhh
Confidence 99999999999999986554321 223346888899999999888999999999999999999999997543221111
Q ss_pred hhhhhhhccCc-hhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHH
Q 047800 472 LKHWVNDWLPI-SIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKII 539 (547)
Q Consensus 472 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~ 539 (547)
........ ........ .... .....+..+++++.+++.+||+.||++|||+.+++++|++++
T Consensus 239 ---~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 239 ---MIGPTHGQMTVTRLVNT-LKEG--KRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp ---HHCSCCGGGHHHHHHHH-HHTT--CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---ccCCcccccCHHHHHHH-Hhcc--CCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 10111111 01111110 0000 011112234567999999999999999999999999999875
No 82
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.2e-35 Score=300.18 Aligned_cols=191 Identities=22% Similarity=0.310 Sum_probs=158.6
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~ 396 (547)
||||+++++++.+....++||||+++|+|.+++.... .+++.++..++.|++.||+||| +++|+||||||+||+++
T Consensus 77 hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~ 152 (345)
T 1xjd_A 77 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLD 152 (345)
T ss_dssp CTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEEC
T ss_pred CCCCCcEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEEC
Confidence 9999999999999999999999999999999998744 6999999999999999999999 99999999999999999
Q ss_pred CCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhh
Q 047800 397 DNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWV 476 (547)
Q Consensus 397 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~ 476 (547)
.++.+||+|||+++............+||+.|+|||++.+..++.++||||+||++|||++|+.||......+.. ...
T Consensus 153 ~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~-~~i- 230 (345)
T 1xjd_A 153 KDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF-HSI- 230 (345)
T ss_dssp TTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-HHH-
T ss_pred CCCCEEEeEChhhhhcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHH-HHH-
Confidence 999999999999986443333344567999999999999999999999999999999999999999764332211 110
Q ss_pred hhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChH-HHH
Q 047800 477 NDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPK-EIV 532 (547)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~-eil 532 (547)
... ... .+..++.++.+++.+||..||++||++. +++
T Consensus 231 -----------~~~----~~~----~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 231 -----------RMD----NPF----YPRWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp -----------HHC----CCC----CCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred -----------HhC----CCC----CCcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 000 000 0112345689999999999999999997 664
No 83
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=3.8e-35 Score=299.70 Aligned_cols=197 Identities=21% Similarity=0.244 Sum_probs=160.9
Q ss_pred CCCCCCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCC
Q 047800 312 KRPSNDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKAN 391 (547)
Q Consensus 312 ~~~~~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~ 391 (547)
.+...||||+++++++.+.+..++||||+++|+|.+++.... .+++..++.++.|++.||+||| +++|+||||||+
T Consensus 93 l~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~ 168 (373)
T 2r5t_A 93 LKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPE 168 (373)
T ss_dssp BCCCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGG
T ss_pred HHhCCCCCCCCEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHH
Confidence 345679999999999999999999999999999999998754 6899999999999999999999 999999999999
Q ss_pred cEEeCCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhh
Q 047800 392 NVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMT 471 (547)
Q Consensus 392 Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~ 471 (547)
||+++.++.+||+|||+++............+||+.|+|||++.+..++.++||||+||++|||++|+.||......+..
T Consensus 169 NIll~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~ 248 (373)
T 2r5t_A 169 NILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMY 248 (373)
T ss_dssp GEEECTTSCEEECCCCBCGGGBCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHH
T ss_pred HEEECCCCCEEEeeCccccccccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHH
Confidence 99999999999999999986433333344567999999999999999999999999999999999999999764332211
Q ss_pred hhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHH
Q 047800 472 LKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVT 533 (547)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~ 533 (547)
. .+...... .+..++.++.+++.+||..||++||++.+.++
T Consensus 249 -~------------~i~~~~~~--------~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~ 289 (373)
T 2r5t_A 249 -D------------NILNKPLQ--------LKPNITNSARHLLEGLLQKDRTKRLGAKDDFM 289 (373)
T ss_dssp -H------------HHHHSCCC--------CCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHH
T ss_pred -H------------HHHhcccC--------CCCCCCHHHHHHHHHHcccCHHhCCCCCCCHH
Confidence 1 11111100 01123456899999999999999999864433
No 84
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.9e-35 Score=295.89 Aligned_cols=202 Identities=20% Similarity=0.318 Sum_probs=159.2
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~ 396 (547)
||||+++++++..+. .++|+||+++|+|.+++......+++..++.++.|++.||+||| +++|+||||||+||+++
T Consensus 76 hp~iv~~~~~~~~~~-~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~ 151 (327)
T 3lzb_A 76 NPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVK 151 (327)
T ss_dssp BTTBCCCCEEEESSS-EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEE
T ss_pred CCCeeEEEEEEecCC-ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEc
Confidence 999999999998765 78999999999999999887667999999999999999999999 99999999999999999
Q ss_pred CCCcEEEcccCCcccCCCCCc--ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCchhhhhhhhhh
Q 047800 397 DNMVAHLSDFGIAKTGEDQSM--TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFI-GKKPTDEIFNEEMTLK 473 (547)
Q Consensus 397 ~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ellt-g~~p~~~~~~~~~~~~ 473 (547)
.++.+||+|||+++....... ......+|+.|+|||++.+..++.++||||+||++|||++ |+.||.........
T Consensus 152 ~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~-- 229 (327)
T 3lzb_A 152 TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-- 229 (327)
T ss_dssp ETTEEEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH--
T ss_pred CCCCEEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH--
Confidence 999999999999986543221 1222356788999999999899999999999999999999 99999764332211
Q ss_pred hhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHHH
Q 047800 474 HWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESL 542 (547)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~~ 542 (547)
..+...... ..+..++.++.+++.+||..||++|||+.|+++.|+++.+..
T Consensus 230 ------------~~~~~~~~~------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 280 (327)
T 3lzb_A 230 ------------SILEKGERL------PQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDP 280 (327)
T ss_dssp ------------HHHHTTCCC------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSH
T ss_pred ------------HHHHcCCCC------CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCc
Confidence 111111000 011123456899999999999999999999999999987543
No 85
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=5.4e-35 Score=287.36 Aligned_cols=215 Identities=22% Similarity=0.334 Sum_probs=169.1
Q ss_pred HHHHHH-HHHHHHhhcCCCCCCCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHH
Q 047800 296 FMIVVI-LLILRCRKRGKRPSNDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEY 374 (547)
Q Consensus 296 ~~~~~~-~~~~~~~~~~~~~~~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~ 374 (547)
+..|+. +..++ ||||+++++++.++ ..++||||+++|+|.+++......+++..+..++.|++.||+|
T Consensus 60 ~~~E~~~l~~l~----------h~~i~~~~~~~~~~-~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~ 128 (281)
T 3cc6_A 60 FMSEAVIMKNLD----------HPHIVKLIGIIEEE-PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAY 128 (281)
T ss_dssp HHHHHHHHHHHC----------CTTBCCEEEEECSS-SCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC----------CCCcceEEEEEcCC-CCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHH
Confidence 455555 55666 99999999998754 4689999999999999998766679999999999999999999
Q ss_pred HHccCCCCccccCCCCCcEEeCCCCcEEEcccCCcccCCCCCc-ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHH
Q 047800 375 MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSM-TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLM 453 (547)
Q Consensus 375 lH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ 453 (547)
|| +++++|+||||+||+++.++.+||+|||.+........ ......+++.|+|||++.+..++.++||||||+++|
T Consensus 129 lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 205 (281)
T 3cc6_A 129 LE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMW 205 (281)
T ss_dssp HH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred HH---HCCcccCCCccceEEECCCCcEEeCccCCCcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHH
Confidence 99 99999999999999999999999999999976543321 123345788999999998888999999999999999
Q ss_pred HHHh-CCCCCchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHH
Q 047800 454 KTFI-GKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIV 532 (547)
Q Consensus 454 ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil 532 (547)
||++ |+.||......... .. +..... ...+..+++.+.+++.+||..||++|||+.|++
T Consensus 206 ~llt~g~~p~~~~~~~~~~-~~-------------~~~~~~------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell 265 (281)
T 3cc6_A 206 EILSFGKQPFFWLENKDVI-GV-------------LEKGDR------LPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELV 265 (281)
T ss_dssp HHHTTTCCTTTTSCGGGHH-HH-------------HHHTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HHHhCCCCCcccCChHHHH-HH-------------HhcCCC------CCCCCCCCHHHHHHHHHHccCCchhCcCHHHHH
Confidence 9998 99999754332211 00 000000 001112345689999999999999999999999
Q ss_pred HHHHHHHHHHHh
Q 047800 533 TRLLKIIESLLK 544 (547)
Q Consensus 533 ~~L~~i~~~~~~ 544 (547)
+.|+.+.+...+
T Consensus 266 ~~L~~~~~~~~~ 277 (281)
T 3cc6_A 266 CSLSDVYQMEKD 277 (281)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHhhhh
Confidence 999999876544
No 86
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.9e-34 Score=288.83 Aligned_cols=266 Identities=18% Similarity=0.192 Sum_probs=186.0
Q ss_pred cCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCccccc
Q 047800 246 ILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPVA 324 (547)
Q Consensus 246 ~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l~ 324 (547)
..+.|.++.++......+...++.|.......... ...+..|+. +..++ ||||++++
T Consensus 16 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~------------~~~~~~E~~~l~~l~----------h~~iv~~~ 73 (319)
T 4euu_A 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRP------------VDVQMREFEVLKKLN----------HKNIVKLF 73 (319)
T ss_dssp EEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSC------------HHHHHHHHHHHHHCC----------CTTBCCEE
T ss_pred EecCCCCeEEEEEEECCCCcEEEEEEeccccccch------------HHHHHHHHHHHHhcC----------CCCcceEE
Confidence 44557888888776665444455442211100000 011344554 55555 99999999
Q ss_pred cccCccc--eeEEEEeccCCCChhHHhhhCC--CCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe----C
Q 047800 325 TSCSNEE--FKALILEYKPHGSLEKYLYSGN--CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL----D 396 (547)
Q Consensus 325 ~~~~~~~--~~~lv~ey~~~gsL~~~l~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill----~ 396 (547)
+++.... ..++||||+++|+|.+++.... ..+++.+++.++.|++.||+||| +.+|+||||||+||++ +
T Consensus 74 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~ 150 (319)
T 4euu_A 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGED 150 (319)
T ss_dssp EEEECTTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTT
T ss_pred EEeecCCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCC
Confidence 9987654 7899999999999999998643 23899999999999999999999 9999999999999999 7
Q ss_pred CCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCC--------CCCCCcchhHHHHHHHHHHHHhCCCCCchhhhh
Q 047800 397 DNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGR--------EGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNE 468 (547)
Q Consensus 397 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~ 468 (547)
.++.+||+|||+++....... .....||+.|+|||++. +..++.++|||||||++|||++|+.||......
T Consensus 151 ~~~~~kL~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~ 229 (319)
T 4euu_A 151 GQSVYKLTDFGAARELEDDEQ-FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP 229 (319)
T ss_dssp SCEEEEECCCTTCEECCTTCC-BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCG
T ss_pred CCceEEEccCCCceecCCCCc-eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcc
Confidence 888899999999987654332 23347999999999875 567899999999999999999999999753322
Q ss_pred hhh---hhhhhhhccCchhhh---hhhhhh--ccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHH
Q 047800 469 EMT---LKHWVNDWLPISIME---VIDANL--LSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLK 537 (547)
Q Consensus 469 ~~~---~~~~~~~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~ 537 (547)
... .........+..... ...... .................+.+++.+||+.||++|||++|+++....
T Consensus 230 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d 306 (319)
T 4euu_A 230 RRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD 306 (319)
T ss_dssp GGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred chhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHH
Confidence 211 111111111110000 000000 000011112235667889999999999999999999999988764
No 87
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=4e-35 Score=296.81 Aligned_cols=196 Identities=20% Similarity=0.290 Sum_probs=155.5
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
+||||+++++++.+....++||||+++|+|.+++.... .+++..++.++.|++.||+||| +++|+||||||+||++
T Consensus 68 ~hp~iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll 143 (345)
T 3a8x_A 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLL 143 (345)
T ss_dssp TCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEE
T ss_pred CCCccCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEE
Confidence 49999999999999999999999999999999998754 6999999999999999999999 9999999999999999
Q ss_pred CCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhh
Q 047800 396 DDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHW 475 (547)
Q Consensus 396 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~ 475 (547)
+.++.+||+|||+++............+||+.|+|||++.+..++.++||||+||++|||++|+.||............
T Consensus 144 ~~~g~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~- 222 (345)
T 3a8x_A 144 DSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN- 222 (345)
T ss_dssp CTTSCEEECCGGGCBCSCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC--------
T ss_pred CCCCCEEEEeccccccccCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccc-
Confidence 9999999999999986433333344558999999999999989999999999999999999999999653211100000
Q ss_pred hhhccCchhh-hhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCCh
Q 047800 476 VNDWLPISIM-EVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINP 528 (547)
Q Consensus 476 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~ 528 (547)
....+. .+..... ..+..++.++.+++.+||..||++||++
T Consensus 223 ----~~~~~~~~i~~~~~--------~~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 223 ----TEDYLFQVILEKQI--------RIPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp ----CHHHHHHHHHHCCC--------CCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred ----cHHHHHHHHHcCCC--------CCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 000000 1111100 0112235668999999999999999996
No 88
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.3e-35 Score=299.02 Aligned_cols=207 Identities=23% Similarity=0.330 Sum_probs=166.3
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhC-------------CCCCCHHHHHHHHHHHHHHHHHHHccCCCCc
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSG-------------NCSLDIFQRLNSMIDVALALEYMHFGYSAPV 383 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~-------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i 383 (547)
||||+++++++.+++..++||||+++|+|.+++... ...+++..++.++.|++.||+||| +++|
T Consensus 109 h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i 185 (333)
T 2i1m_A 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNC 185 (333)
T ss_dssp CTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred CCCeeeEEEEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCc
Confidence 999999999999999999999999999999999753 235799999999999999999999 8999
Q ss_pred cccCCCCCcEEeCCCCcEEEcccCCcccCCCCCc--ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCC
Q 047800 384 IHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSM--TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFI-GKK 460 (547)
Q Consensus 384 ~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ellt-g~~ 460 (547)
+||||||+||+++.++.+||+|||+++....... ......+|+.|+|||++.+..++.++||||||+++|||++ |..
T Consensus 186 vH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~ 265 (333)
T 2i1m_A 186 IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN 265 (333)
T ss_dssp ECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCC
T ss_pred ccCCcccceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999999999975433221 1223456789999999988889999999999999999998 999
Q ss_pred CCchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHH
Q 047800 461 PTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIE 540 (547)
Q Consensus 461 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~ 540 (547)
||.......... . .+....... .+..++..+.+++.+||+.||++|||+.++++.|+++.+
T Consensus 266 p~~~~~~~~~~~-~------------~~~~~~~~~------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 326 (333)
T 2i1m_A 266 PYPGILVNSKFY-K------------LVKDGYQMA------QPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 326 (333)
T ss_dssp SSTTCCSSHHHH-H------------HHHHTCCCC------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCcccchhHHHH-H------------HHhcCCCCC------CCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence 997643222111 1 111110000 011124568999999999999999999999999999988
Q ss_pred HHHhh
Q 047800 541 SLLKK 545 (547)
Q Consensus 541 ~~~~~ 545 (547)
+..++
T Consensus 327 ~~~~~ 331 (333)
T 2i1m_A 327 EDRRE 331 (333)
T ss_dssp HHHHH
T ss_pred hhhcc
Confidence 76553
No 89
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=5e-35 Score=289.31 Aligned_cols=215 Identities=20% Similarity=0.195 Sum_probs=160.7
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
.||||+++++++.+++..++||||+++ ++.+.+......+++.++..++.|++.||+||| +++|+||||||+||++
T Consensus 59 ~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~ 134 (292)
T 3o0g_A 59 KHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLI 134 (292)
T ss_dssp CCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEE
T ss_pred CCCCEeeEEeEEEeCCEEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEE
Confidence 399999999999999999999999975 777777665567999999999999999999999 9999999999999999
Q ss_pred CCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCC-CCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhh
Q 047800 396 DDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGR-VSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKH 474 (547)
Q Consensus 396 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~ 474 (547)
+.++.+||+|||+++.............||+.|+|||++.+.. ++.++||||+||++|||++|..||.........+..
T Consensus 135 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~ 214 (292)
T 3o0g_A 135 NRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKR 214 (292)
T ss_dssp CTTSCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHH
T ss_pred cCCCCEEEeecccceecCCccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHH
Confidence 9999999999999987654444445567899999999998766 799999999999999999988886443333332322
Q ss_pred hhhhccCc---hh---hhhhhhhhc---cchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 475 WVNDWLPI---SI---MEVIDANLL---SREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 475 ~~~~~~~~---~~---~~~~~~~~~---~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
........ .. .+..+.... ............+++++.+++.+||+.||++|||++|+++.
T Consensus 215 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 215 IFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp HHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 22211100 00 000000000 00000000112235668999999999999999999999863
No 90
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=9.1e-35 Score=295.19 Aligned_cols=208 Identities=18% Similarity=0.216 Sum_probs=164.4
Q ss_pred HHHHHH-HHHHHHhhcCCCCCCCCCccccccccCccceeEEEEeccCCCChhHHhhhC---CCCCCHHHHHHHHHHHHHH
Q 047800 296 FMIVVI-LLILRCRKRGKRPSNDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSG---NCSLDIFQRLNSMIDVALA 371 (547)
Q Consensus 296 ~~~~~~-~~~~~~~~~~~~~~~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~---~~~l~~~~~~~i~~~i~~~ 371 (547)
+..|+. +..++ ||||+++++++.+.+..++||||+++|+|.+++... ...+++..+..++.|++.|
T Consensus 73 ~~~E~~~l~~l~----------hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~a 142 (351)
T 3c0i_A 73 LKREASICHMLK----------HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142 (351)
T ss_dssp HHHHHHHHHHCC----------CTTBCCEEEEEEETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC----------CCCCCcEEEEEEeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHH
Confidence 455555 55555 999999999999999999999999999998887642 2358999999999999999
Q ss_pred HHHHHccCCCCccccCCCCCcEEeCCCCc---EEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHH
Q 047800 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMV---AHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSF 448 (547)
Q Consensus 372 l~~lH~~~~~~i~H~dlkp~Nill~~~~~---~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~ 448 (547)
|+||| +++|+||||||+||+++.++. +||+|||+++.............||+.|+|||++.+..++.++||||+
T Consensus 143 l~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 219 (351)
T 3c0i_A 143 LRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGC 219 (351)
T ss_dssp HHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHH
T ss_pred HHHHH---HCCceeccCChHHeEEecCCCCCcEEEecCcceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHH
Confidence 99999 999999999999999976554 999999999876554433445579999999999999899999999999
Q ss_pred HHHHHHHHhCCCCCchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCCh
Q 047800 449 GIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINP 528 (547)
Q Consensus 449 G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~ 528 (547)
||++|||++|+.||...... ...... ........ .....+++++.+++.+||..||++|||+
T Consensus 220 G~il~~ll~g~~pf~~~~~~--~~~~i~------------~~~~~~~~----~~~~~~s~~~~~li~~~L~~dP~~R~s~ 281 (351)
T 3c0i_A 220 GVILFILLSGCLPFYGTKER--LFEGII------------KGKYKMNP----RQWSHISESAKDLVRRMLMLDPAERITV 281 (351)
T ss_dssp HHHHHHHHHSSCSSCSSHHH--HHHHHH------------HTCCCCCH----HHHTTSCHHHHHHHHHHTCSSTTTSCCH
T ss_pred HHHHHHHHHCCCCCCCcHHH--HHHHHH------------cCCCCCCc----cccccCCHHHHHHHHHHCCCChhHCcCH
Confidence 99999999999999763211 111110 00000000 0011235568999999999999999999
Q ss_pred HHHHHH
Q 047800 529 KEIVTR 534 (547)
Q Consensus 529 ~eil~~ 534 (547)
.|+++.
T Consensus 282 ~e~l~h 287 (351)
T 3c0i_A 282 YEALNH 287 (351)
T ss_dssp HHHHTS
T ss_pred HHHhcC
Confidence 999863
No 91
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=6.8e-35 Score=297.16 Aligned_cols=246 Identities=22% Similarity=0.237 Sum_probs=171.2
Q ss_pred ccCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCcccc
Q 047800 245 EILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPV 323 (547)
Q Consensus 245 ~~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l 323 (547)
...+.|.++.++......+...++.|........ ...+..|+. +..++ ||||+++
T Consensus 26 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--------------~~~~~~E~~~l~~l~----------hpniv~~ 81 (361)
T 3uc3_A 26 KDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI--------------DENVQREIINHRSLR----------HPNIVRF 81 (361)
T ss_dssp EEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS--------------CHHHHHHHHHHHHCC----------CTTBCCE
T ss_pred EEeccCCCEEEEEEEECCCCcEEEEEEEecCccc--------------cHHHHHHHHHHHhCC----------CCCCCcE
Confidence 3456688888887766555444554422110000 011444554 44545 9999999
Q ss_pred ccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCCc--E
Q 047800 324 ATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMV--A 401 (547)
Q Consensus 324 ~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~~--~ 401 (547)
++++.+....++||||+++|+|.+++...+ .+++..+..++.|++.||+||| +++|+||||||+||+++.++. +
T Consensus 82 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~ 157 (361)
T 3uc3_A 82 KEVILTPTHLAIIMEYASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRL 157 (361)
T ss_dssp EEEEECSSEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCE
T ss_pred EEEEeeCCEEEEEEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceE
Confidence 999999999999999999999999997654 6999999999999999999999 999999999999999987765 9
Q ss_pred EEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcc-hhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhhhhcc
Q 047800 402 HLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSAN-GDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWL 480 (547)
Q Consensus 402 kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 480 (547)
||+|||+++...... ......||+.|+|||++.+..++.+ +||||+||++|||++|+.||............ .
T Consensus 158 kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~-~---- 231 (361)
T 3uc3_A 158 KICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKT-I---- 231 (361)
T ss_dssp EECCCCCC----------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHH-H----
T ss_pred EEeecCccccccccC-CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHH-H----
Confidence 999999997433222 2233479999999999988887655 89999999999999999999764332211110 0
Q ss_pred CchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 481 PISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
..+........ ....+++++.+++.+||..||++|||+.|+++.
T Consensus 232 ----~~~~~~~~~~~------~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 232 ----QRILSVKYSIP------DDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp ----HHHHTTCCCCC------TTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred ----HHHhcCCCCCC------CcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 01111100000 001124568999999999999999999999875
No 92
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=3.1e-34 Score=292.95 Aligned_cols=200 Identities=14% Similarity=0.079 Sum_probs=163.5
Q ss_pred CCCCCccccccccCccceeEEEEeccCCCChhHHhhh----CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCC
Q 047800 315 SNDANISPVATSCSNEEFKALILEYKPHGSLEKYLYS----GNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKA 390 (547)
Q Consensus 315 ~~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~----~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp 390 (547)
..|+||+++++++...+..++||||+++|+|.+++.. ....+++.+++.++.|++.||+||| +++|+||||||
T Consensus 124 ~~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp 200 (365)
T 3e7e_A 124 SMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKP 200 (365)
T ss_dssp GGGGGBCCEEEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSG
T ss_pred hhhhhhhhhheeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCH
Confidence 3499999999999999999999999999999999975 3356999999999999999999999 99999999999
Q ss_pred CcEEeCC-----------CCcEEEcccCCcccCC--CCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHh
Q 047800 391 NNVLLDD-----------NMVAHLSDFGIAKTGE--DQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFI 457 (547)
Q Consensus 391 ~Nill~~-----------~~~~kl~Dfg~a~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ellt 457 (547)
+|||++. ++.+||+|||+|+... ..........||+.|+|||++.+..++.++|||||||++|||++
T Consensus 201 ~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt 280 (365)
T 3e7e_A 201 DNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLF 280 (365)
T ss_dssp GGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHH
T ss_pred HHEEecccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHh
Confidence 9999998 8999999999996533 12223344579999999999999999999999999999999999
Q ss_pred CCCCCchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCC-CChHHHHHHHH
Q 047800 458 GKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQR-INPKEIVTRLL 536 (547)
Q Consensus 458 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R-ps~~eil~~L~ 536 (547)
|+.||............ .+. . ... .+.+.+++..|++.+|.+| |+++++.+.|+
T Consensus 281 g~~pf~~~~~~~~~~~~------------~~~-----~----~~~----~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~ 335 (365)
T 3e7e_A 281 GTYMKVKNEGGECKPEG------------LFR-----R----LPH----LDMWNEFFHVMLNIPDCHHLPSLDLLRQKLK 335 (365)
T ss_dssp SSCCCEEEETTEEEECS------------CCT-----T----CSS----HHHHHHHHHHHHCCCCTTCCCCHHHHHHHHH
T ss_pred CCCccccCCCCceeech------------hcc-----c----cCc----HHHHHHHHHHHcCCCCCCcchHHHHHHHHHH
Confidence 99999654322211100 000 0 001 3457789999999999999 57888888888
Q ss_pred HHHHHH
Q 047800 537 KIIESL 542 (547)
Q Consensus 537 ~i~~~~ 542 (547)
++.++.
T Consensus 336 ~~l~~~ 341 (365)
T 3e7e_A 336 KVFQQH 341 (365)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 887764
No 93
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=2.9e-34 Score=283.95 Aligned_cols=221 Identities=17% Similarity=0.191 Sum_probs=169.7
Q ss_pred HHHHHH-HHHHHHhhcCCCCCCCCCcccccccc-CccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHH
Q 047800 296 FMIVVI-LLILRCRKRGKRPSNDANISPVATSC-SNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALE 373 (547)
Q Consensus 296 ~~~~~~-~~~~~~~~~~~~~~~H~nIv~l~~~~-~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~ 373 (547)
+..|+. +..++ |++++..++++ ......++||||+ +|+|.+++......+++.++..++.|++.||+
T Consensus 51 ~~~e~~~l~~l~----------~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~ 119 (296)
T 4hgt_A 51 LHIESKIYKMMQ----------GGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIE 119 (296)
T ss_dssp HHHHHHHHHHHT----------TSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc----------CCCCCCeeeeecCCCCceEEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 445555 55666 77777776665 5567889999999 88999999876667999999999999999999
Q ss_pred HHHccCCCCccccCCCCCcEEe---CCCCcEEEcccCCcccCCCCCc-------ccccccCCCCCCCCCCCCCCCCCcch
Q 047800 374 YMHFGYSAPVIHCDIKANNVLL---DDNMVAHLSDFGIAKTGEDQSM-------TQTQTLATIGYMAPEYGREGRVSANG 443 (547)
Q Consensus 374 ~lH~~~~~~i~H~dlkp~Nill---~~~~~~kl~Dfg~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~s 443 (547)
||| +++|+||||||+||++ +.++.+||+|||+++....... ......||+.|+|||++.+..++.++
T Consensus 120 ~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 196 (296)
T 4hgt_A 120 YIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRD 196 (296)
T ss_dssp HHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHH
T ss_pred HHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchh
Confidence 999 9999999999999999 7889999999999986543321 12345799999999999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCC
Q 047800 444 DVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPE 523 (547)
Q Consensus 444 Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 523 (547)
||||+||++|||++|+.||.......... ....+.......... .....+++++.+++.+||+.||+
T Consensus 197 Di~slG~il~~l~~g~~pf~~~~~~~~~~----------~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~~p~ 263 (296)
T 4hgt_A 197 DLESLGYVLMYFNLGSLPWQGLKAATKRQ----------KYERISEKKMSTPIE---VLCKGYPSEFATYLNFCRSLRFD 263 (296)
T ss_dssp HHHHHHHHHHHHHHSSCTTSSCCCSSSSS----------HHHHHHHHHHHSCHH---HHTTTSCHHHHHHHHHHHTSCTT
T ss_pred HHHHHHHHHHHHhcCCCCCcccchhhhhh----------hhhhhhcccccchhh---hhhccCCHHHHHHHHHHHhcCCC
Confidence 99999999999999999997643221100 000111110000000 00012245799999999999999
Q ss_pred CCCChHHHHHHHHHHHHHHH
Q 047800 524 QRINPKEIVTRLLKIIESLL 543 (547)
Q Consensus 524 ~Rps~~eil~~L~~i~~~~~ 543 (547)
+|||++++++.|+++.++..
T Consensus 264 ~Rpt~~~l~~~l~~~~~~~~ 283 (296)
T 4hgt_A 264 DKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp CCCCHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHhC
Confidence 99999999999999988763
No 94
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.7e-35 Score=289.45 Aligned_cols=203 Identities=21% Similarity=0.347 Sum_probs=165.9
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~ 396 (547)
||||+++++++ ..+..++||||+++|+|.+++......+++.++..++.|++.||.||| +.+++|+||||+||+++
T Consensus 69 h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~ 144 (287)
T 1u59_A 69 NPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLV 144 (287)
T ss_dssp CTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEE
T ss_pred CCCEeEEEEEe-cCCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEc
Confidence 99999999999 456689999999999999999876667999999999999999999999 99999999999999999
Q ss_pred CCCcEEEcccCCcccCCCCCc---ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCchhhhhhhhh
Q 047800 397 DNMVAHLSDFGIAKTGEDQSM---TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFI-GKKPTDEIFNEEMTL 472 (547)
Q Consensus 397 ~~~~~kl~Dfg~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ellt-g~~p~~~~~~~~~~~ 472 (547)
.++.+||+|||+++....... ......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||......+..
T Consensus 145 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~- 223 (287)
T 1u59_A 145 NRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM- 223 (287)
T ss_dssp ETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHH-
T ss_pred CCCCEEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHH-
Confidence 999999999999986543322 1222356889999999988889999999999999999998 99999764332211
Q ss_pred hhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHHHH
Q 047800 473 KHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESLL 543 (547)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~~~ 543 (547)
.... .... ...+..+++++.+++.+||..||++|||+.++++.|+.+..+..
T Consensus 224 -~~i~------------~~~~------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 275 (287)
T 1u59_A 224 -AFIE------------QGKR------MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 275 (287)
T ss_dssp -HHHH------------TTCC------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred -HHHh------------cCCc------CCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 1110 0000 00112235679999999999999999999999999999988764
No 95
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=3.6e-35 Score=294.62 Aligned_cols=204 Identities=23% Similarity=0.400 Sum_probs=155.3
Q ss_pred CCCCccccccccCcccee------EEEEeccCCCChhHHhhhCC-----CCCCHHHHHHHHHHHHHHHHHHHccCCCCcc
Q 047800 316 NDANISPVATSCSNEEFK------ALILEYKPHGSLEKYLYSGN-----CSLDIFQRLNSMIDVALALEYMHFGYSAPVI 384 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~------~lv~ey~~~gsL~~~l~~~~-----~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~ 384 (547)
+||||+++++++...... ++||||+++|+|.+++.... ..+++.+++.++.|++.||+||| +++|+
T Consensus 83 ~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~iv 159 (323)
T 3qup_A 83 DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFI 159 (323)
T ss_dssp CCTTBCCCCEEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCC
T ss_pred CCCceehhhceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcc
Confidence 499999999999876544 99999999999999996432 25899999999999999999999 99999
Q ss_pred ccCCCCCcEEeCCCCcEEEcccCCcccCCCCCc--ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCC
Q 047800 385 HCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSM--TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFI-GKKP 461 (547)
Q Consensus 385 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ellt-g~~p 461 (547)
||||||+||+++.++.+||+|||+++....... ......+++.|+|||++.+..++.++||||+||++|||++ |+.|
T Consensus 160 H~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p 239 (323)
T 3qup_A 160 HRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239 (323)
T ss_dssp CSCCSGGGEEECTTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred cCCCCcceEEEcCCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCC
Confidence 999999999999999999999999976543221 1223356788999999998899999999999999999999 9999
Q ss_pred CchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHH
Q 047800 462 TDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIES 541 (547)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~ 541 (547)
|......+.. .... .... ...+..+++++.+++.+||+.||++|||+.++++.|+++.+.
T Consensus 240 ~~~~~~~~~~-~~~~------------~~~~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~ 299 (323)
T 3qup_A 240 YAGIENAEIY-NYLI------------GGNR-------LKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH 299 (323)
T ss_dssp TTTCCGGGHH-HHHH------------TTCC-------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ccccChHHHH-HHHh------------cCCC-------CCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 9764332211 1100 0000 001122345689999999999999999999999999998765
Q ss_pred H
Q 047800 542 L 542 (547)
Q Consensus 542 ~ 542 (547)
.
T Consensus 300 ~ 300 (323)
T 3qup_A 300 L 300 (323)
T ss_dssp -
T ss_pred h
Confidence 3
No 96
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=2.9e-35 Score=297.50 Aligned_cols=201 Identities=18% Similarity=0.256 Sum_probs=158.6
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~ 396 (547)
||||+++++++.++...++||||+++|+|.+++.... .+++.++..++.|++.||+||| +++|+||||||+||++.
T Consensus 75 hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~ 150 (342)
T 2qr7_A 75 HPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYV 150 (342)
T ss_dssp STTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEES
T ss_pred CCCcCeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEe
Confidence 9999999999999999999999999999999998754 6999999999999999999999 99999999999999984
Q ss_pred CC----CcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhh
Q 047800 397 DN----MVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTL 472 (547)
Q Consensus 397 ~~----~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~ 472 (547)
.. +.+||+|||+++.............||+.|+|||++.+..++.++||||+||++|||++|+.||........
T Consensus 151 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-- 228 (342)
T 2qr7_A 151 DESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTP-- 228 (342)
T ss_dssp SSSCSGGGEEECCCTTCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCH--
T ss_pred cCCCCcCeEEEEECCCcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCH--
Confidence 33 359999999998665443334456799999999999887899999999999999999999999975321110
Q ss_pred hhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHH
Q 047800 473 KHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRL 535 (547)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L 535 (547)
.... ..+...... ........+++++.+++.+||..||++|||+.++++.-
T Consensus 229 ~~~~---------~~i~~~~~~---~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp 279 (342)
T 2qr7_A 229 EEIL---------ARIGSGKFS---LSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHP 279 (342)
T ss_dssp HHHH---------HHHHHCCCC---CCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSH
T ss_pred HHHH---------HHHccCCcc---cCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCC
Confidence 0000 000000000 00001122356789999999999999999999998653
No 97
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=8.8e-35 Score=290.29 Aligned_cols=191 Identities=19% Similarity=0.190 Sum_probs=153.9
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
.||||++++++|.+++..++||||+ +|+|.+++......+++..++.++.|++.||+||| +.+|+||||||+||++
T Consensus 115 ~h~~iv~l~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll 190 (311)
T 3p1a_A 115 QHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFL 190 (311)
T ss_dssp CCTTBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEE
T ss_pred CCCcEEEEEEEEEeCCEEEEEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEE
Confidence 3999999999999999999999999 67999999876667999999999999999999999 8999999999999999
Q ss_pred CCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhh
Q 047800 396 DDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHW 475 (547)
Q Consensus 396 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~ 475 (547)
+.++.+||+|||+++...... ......||+.|+|||++.+ .++.++|||||||++|||++|..|+...... ...
T Consensus 191 ~~~~~~kl~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~----~~~ 264 (311)
T 3p1a_A 191 GPRGRCKLGDFGLLVELGTAG-AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGW----QQL 264 (311)
T ss_dssp CGGGCEEECCCTTCEECC-------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHH----HHH
T ss_pred CCCCCEEEccceeeeecccCC-CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHH----HHH
Confidence 999999999999997654332 2334469999999999876 7899999999999999999997766542211 111
Q ss_pred hhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 476 VNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
.....+ ...+..+++++.+++.+||+.||++|||++|+++.
T Consensus 265 ~~~~~~------------------~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 265 RQGYLP------------------PEFTAGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp TTTCCC------------------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hccCCC------------------cccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 110000 00112235678999999999999999999999863
No 98
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.4e-34 Score=288.45 Aligned_cols=206 Identities=19% Similarity=0.244 Sum_probs=156.2
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhh---CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcE
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYS---GNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Ni 393 (547)
||||+++++++...+..++||||+++|+|.+++.. ....+++..++.++.|++.||.||| +++++|+||||+||
T Consensus 91 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NI 167 (310)
T 2wqm_A 91 HPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANV 167 (310)
T ss_dssp CTTBCCEEEEEEETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGE
T ss_pred CCCEeeEEEEEEcCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHE
Confidence 99999999999999999999999999999999874 3346899999999999999999999 99999999999999
Q ss_pred EeCCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhh
Q 047800 394 LLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLK 473 (547)
Q Consensus 394 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~ 473 (547)
+++.++.+||+|||++..............|++.|+|||++.+..++.++||||||+++|||++|+.||...........
T Consensus 168 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~ 247 (310)
T 2wqm_A 168 FITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLC 247 (310)
T ss_dssp EECTTSCEEECCC------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHH
T ss_pred EEcCCCCEEEEeccceeeecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHH
Confidence 99999999999999997655433333345789999999999998999999999999999999999999975322211111
Q ss_pred hhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHHH
Q 047800 474 HWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESL 542 (547)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~~ 542 (547)
..... .... ......++.++.+++.+||..||++|||+.++++.|+++....
T Consensus 248 ~~~~~-----------~~~~------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~ 299 (310)
T 2wqm_A 248 KKIEQ-----------CDYP------PLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACT 299 (310)
T ss_dssp HHHHT-----------TCSC------CCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHhhc-----------ccCC------CCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhh
Confidence 11100 0000 0001223456899999999999999999999999999998764
No 99
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=3.2e-35 Score=298.29 Aligned_cols=193 Identities=20% Similarity=0.307 Sum_probs=155.9
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
+||||+++++++.+.+..++||||+++|+|.+++.... .+++.++..++.|++.||+||| +++|+||||||+|||+
T Consensus 82 ~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl 157 (353)
T 3txo_A 82 NHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLL 157 (353)
T ss_dssp TCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEE
T ss_pred CCCceeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEE
Confidence 49999999999999999999999999999999998754 6999999999999999999999 9999999999999999
Q ss_pred CCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhh
Q 047800 396 DDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHW 475 (547)
Q Consensus 396 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~ 475 (547)
+.++.+||+|||+++............+||+.|+|||++.+..++.++||||+||++|||++|+.||......+.. ..
T Consensus 158 ~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~-~~- 235 (353)
T 3txo_A 158 DHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLF-EA- 235 (353)
T ss_dssp CTTSCEEECCCTTCBCSCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-HH-
T ss_pred CCCCCEEEccccceeecccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHH-HH-
Confidence 9999999999999986544433444567999999999999888999999999999999999999999764332211 11
Q ss_pred hhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCCh------HHHHH
Q 047800 476 VNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINP------KEIVT 533 (547)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~------~eil~ 533 (547)
+..... ..+..++.++.+++.+||..||++||++ +|+++
T Consensus 236 -----------i~~~~~--------~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 236 -----------ILNDEV--------VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp -----------HHHCCC--------CCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred -----------HHcCCC--------CCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 111100 0011234568999999999999999998 66664
No 100
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.6e-35 Score=289.80 Aligned_cols=194 Identities=22% Similarity=0.270 Sum_probs=155.3
Q ss_pred CCCccccccccCc--cceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEE
Q 047800 317 DANISPVATSCSN--EEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394 (547)
Q Consensus 317 H~nIv~l~~~~~~--~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nil 394 (547)
||||+++++++.+ ....++||||+++|+|.++.... .+++.++..++.|++.||+||| +++|+||||||+||+
T Consensus 95 h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil 169 (298)
T 2zv2_A 95 HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK--PLSEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPSNLL 169 (298)
T ss_dssp CTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEE
T ss_pred CCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEE
Confidence 9999999999876 56899999999999998876543 5999999999999999999999 899999999999999
Q ss_pred eCCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCC---CCcchhHHHHHHHHHHHHhCCCCCchhhhhhhh
Q 047800 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGR---VSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMT 471 (547)
Q Consensus 395 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~ 471 (547)
++.++.+||+|||+++.............||+.|+|||++.+.. ++.++||||+||++|||++|+.||.........
T Consensus 170 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~ 249 (298)
T 2zv2_A 170 VGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLH 249 (298)
T ss_dssp ECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred ECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHH
Confidence 99999999999999987654433344557999999999998765 378899999999999999999999753221110
Q ss_pred hhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 472 LKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
... .... ...+ ....+++++.+++.+||+.||++|||+.|+++.
T Consensus 250 -~~~------------~~~~-~~~~-----~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 250 -SKI------------KSQA-LEFP-----DQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp -HHH------------HHCC-CCCC-----SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred -HHH------------hccc-CCCC-----CccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 000 0000 0000 001224568999999999999999999999753
No 101
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1.9e-35 Score=310.58 Aligned_cols=246 Identities=22% Similarity=0.352 Sum_probs=183.1
Q ss_pred cCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCccccc
Q 047800 246 ILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPVA 324 (547)
Q Consensus 246 ~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l~ 324 (547)
..+.|.|+.++.....++. .++++....... . ...+..|+. +..++ |||||+++
T Consensus 195 ~lG~G~fg~V~~~~~~~~~-~vavK~~~~~~~--~------------~~~~~~E~~~l~~l~----------h~~iv~l~ 249 (454)
T 1qcf_A 195 KLGAGQFGEVWMATYNKHT-KVAVKTMKPGSM--S------------VEAFLAEANVMKTLQ----------HDKLVKLH 249 (454)
T ss_dssp EEECCSSEEEEEEEETTTE-EEEEEEECTTSB--C------------HHHHHHHHHHHTTCC----------CTTBCCEE
T ss_pred EcccCCceEEEEEEECCcc-EEEEEEecCCCc--c------------HHHHHHHHHHHhhCC----------CCCEeeEE
Confidence 4566889999887664332 244332111000 0 111455555 44444 99999999
Q ss_pred cccCccceeEEEEeccCCCChhHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCCcEEE
Q 047800 325 TSCSNEEFKALILEYKPHGSLEKYLYSGN-CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHL 403 (547)
Q Consensus 325 ~~~~~~~~~~lv~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~~~kl 403 (547)
+++. .+..++||||+++|+|.++++... ..+++.+++.++.|++.||+||| +++|+||||||+|||++.++.+||
T Consensus 250 ~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl 325 (454)
T 1qcf_A 250 AVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKI 325 (454)
T ss_dssp EEEC-SSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEE
T ss_pred EEEe-CCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEE
Confidence 9987 556899999999999999997532 35889999999999999999999 999999999999999999999999
Q ss_pred cccCCcccCCCCCc-ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCchhhhhhhhhhhhhhhccC
Q 047800 404 SDFGIAKTGEDQSM-TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFI-GKKPTDEIFNEEMTLKHWVNDWLP 481 (547)
Q Consensus 404 ~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 481 (547)
+|||+++....... ......++..|+|||++.+..++.++|||||||++|||++ |+.||......+.. ..
T Consensus 326 ~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~-~~------- 397 (454)
T 1qcf_A 326 ADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI-RA------- 397 (454)
T ss_dssp CSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH-HH-------
T ss_pred eeCCCceEcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHH-HH-------
Confidence 99999986543211 1222346788999999998899999999999999999999 99999764332211 10
Q ss_pred chhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHH
Q 047800 482 ISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIE 540 (547)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~ 540 (547)
+... .....+..+++++.+++.+||+.||++|||++++++.|+.+..
T Consensus 398 ------i~~~------~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~ 444 (454)
T 1qcf_A 398 ------LERG------YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT 444 (454)
T ss_dssp ------HHHT------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred ------HHcC------CCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence 0000 0011122345679999999999999999999999999987643
No 102
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=2.4e-35 Score=304.52 Aligned_cols=247 Identities=18% Similarity=0.274 Sum_probs=180.7
Q ss_pred cCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCccccc
Q 047800 246 ILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPVA 324 (547)
Q Consensus 246 ~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l~ 324 (547)
..+.|.|+.++......+...++.+............ ...+..|.. +..++ |||||+++
T Consensus 76 ~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~----------~~~~~~E~~il~~l~----------hp~Iv~l~ 135 (410)
T 3v8s_A 76 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSD----------SAFFWEERDIMAFAN----------SPWVVQLF 135 (410)
T ss_dssp EEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCC----------CSTHHHHHHHHHHCC----------CTTBCCEE
T ss_pred EEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHH----------HHHHHHHHHHHHhCC----------CCCCCeEE
Confidence 3455888888877665555445544211000000000 001444444 44444 99999999
Q ss_pred cccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCCcEEEc
Q 047800 325 TSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLS 404 (547)
Q Consensus 325 ~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~~~kl~ 404 (547)
+++.++...++||||+++|+|.+++... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+
T Consensus 136 ~~~~~~~~~~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~ 210 (410)
T 3v8s_A 136 YAFQDDRYLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLA 210 (410)
T ss_dssp EEEECSSEEEEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEEC
T ss_pred EEEEECCEEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEe
Confidence 9999999999999999999999999875 4899999999999999999999 9999999999999999999999999
Q ss_pred ccCCcccCCCCCc-ccccccCCCCCCCCCCCCCCC----CCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhhhhc
Q 047800 405 DFGIAKTGEDQSM-TQTQTLATIGYMAPEYGREGR----VSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDW 479 (547)
Q Consensus 405 Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~----~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~ 479 (547)
|||+++....... .....+||+.|+|||++.+.. ++.++||||+||++|||++|+.||......+.. ..
T Consensus 211 DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~-~~----- 284 (410)
T 3v8s_A 211 DFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTY-SK----- 284 (410)
T ss_dssp CCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH-HH-----
T ss_pred ccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHH-HH-----
Confidence 9999986554322 233457999999999997655 789999999999999999999999764322211 11
Q ss_pred cCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCC--CCChHHHHHH
Q 047800 480 LPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQ--RINPKEIVTR 534 (547)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~--Rps~~eil~~ 534 (547)
+.... .....+....++.++.+++.+||..+|.+ ||+++||++.
T Consensus 285 -------i~~~~----~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 285 -------IMNHK----NSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp -------HHTHH----HHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred -------HHhcc----ccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 11100 00000111123566899999999999988 9999999764
No 103
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.4e-34 Score=288.99 Aligned_cols=203 Identities=23% Similarity=0.379 Sum_probs=156.7
Q ss_pred CCCccccccccCccc-----eeEEEEeccCCCChhHHhhh-----CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCcccc
Q 047800 317 DANISPVATSCSNEE-----FKALILEYKPHGSLEKYLYS-----GNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHC 386 (547)
Q Consensus 317 H~nIv~l~~~~~~~~-----~~~lv~ey~~~gsL~~~l~~-----~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~ 386 (547)
||||+++++++.+.. ..++||||+++|+|.+++.. ....+++.+++.++.|++.||.||| +++|+||
T Consensus 95 h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~ 171 (313)
T 3brb_A 95 HPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHR 171 (313)
T ss_dssp CTTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCC
T ss_pred CCCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccC
Confidence 999999999987654 35999999999999999853 2346999999999999999999999 9999999
Q ss_pred CCCCCcEEeCCCCcEEEcccCCcccCCCCC--cccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCc
Q 047800 387 DIKANNVLLDDNMVAHLSDFGIAKTGEDQS--MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFI-GKKPTD 463 (547)
Q Consensus 387 dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ellt-g~~p~~ 463 (547)
||||+||+++.++.+||+|||+++...... .......+++.|+|||.+.+..++.++||||||+++|||++ |..||.
T Consensus 172 dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~ 251 (313)
T 3brb_A 172 DLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYP 251 (313)
T ss_dssp CCSGGGEEECTTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred CCCcceEEEcCCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCc
Confidence 999999999999999999999997654322 11223357889999999999899999999999999999999 889987
Q ss_pred hhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHHH
Q 047800 464 EIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESL 542 (547)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~~ 542 (547)
........ ....... . ...+..+++++.+++.+||..||++|||+.++++.|+++.+++
T Consensus 252 ~~~~~~~~-~~~~~~~------------~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l 310 (313)
T 3brb_A 252 GVQNHEMY-DYLLHGH------------R-------LKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310 (313)
T ss_dssp TCCGGGHH-HHHHTTC------------C-------CCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred cCCHHHHH-HHHHcCC------------C-------CCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 64332211 1100000 0 0011223456899999999999999999999999999998764
No 104
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=6.6e-35 Score=295.90 Aligned_cols=242 Identities=20% Similarity=0.213 Sum_probs=170.8
Q ss_pred cCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCccccc
Q 047800 246 ILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPVA 324 (547)
Q Consensus 246 ~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l~ 324 (547)
..+.|.++.++.....+....++.+..... ... ..+..|+. +..++ ||||++++
T Consensus 60 ~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~------------~~~~~E~~~l~~l~----------h~niv~~~ 114 (349)
T 2w4o_A 60 ELGRGATSIVYRCKQKGTQKPYALKVLKKT---VDK------------KIVRTEIGVLLRLS----------HPNIIKLK 114 (349)
T ss_dssp EEEECSSEEEEEEEETTTCCEEEEEEEEC-------------------------CHHHHHCC----------CTTBCCEE
T ss_pred EEeeCCCEEEEEEEECCCCcEEEEEEeccc---hhH------------HHHHHHHHHHHhCC----------CCCCccee
Confidence 345578888887766655444444421110 000 01334444 44445 99999999
Q ss_pred cccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCC---CCcE
Q 047800 325 TSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDD---NMVA 401 (547)
Q Consensus 325 ~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~---~~~~ 401 (547)
+++.+....++||||+++|+|.+++.... .+++.++..++.|++.||+||| +.+|+||||||+||+++. ++.+
T Consensus 115 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~ 190 (349)
T 2w4o_A 115 EIFETPTEISLVLELVTGGELFDRIVEKG-YYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPL 190 (349)
T ss_dssp EEEECSSEEEEEECCCCSCBHHHHHTTCS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCE
T ss_pred eeEecCCeEEEEEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCE
Confidence 99999999999999999999999998754 6899999999999999999999 899999999999999975 8899
Q ss_pred EEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhhhhccC
Q 047800 402 HLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWLP 481 (547)
Q Consensus 402 kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 481 (547)
||+|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.................
T Consensus 191 kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~-- 267 (349)
T 2w4o_A 191 KIADFGLSKIVEHQV-LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCE-- 267 (349)
T ss_dssp EECCCC-----------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTC--
T ss_pred EEccCccccccCccc-ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCC--
Confidence 999999998654332 22345789999999999998999999999999999999999999976443332222211110
Q ss_pred chhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHH
Q 047800 482 ISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVT 533 (547)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~ 533 (547)
..... .....++.++.+++.+||..||++|||+.|+++
T Consensus 268 ----------~~~~~----~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 268 ----------YYFIS----PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp ----------CCCCT----TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ----------CccCC----chhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00000 001223456899999999999999999999986
No 105
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-34 Score=290.07 Aligned_cols=190 Identities=25% Similarity=0.310 Sum_probs=158.9
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
.||||+++++++.+....++||||+++|+|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||++
T Consensus 64 ~hp~Iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll 139 (318)
T 1fot_A 64 THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILL 139 (318)
T ss_dssp CBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEE
T ss_pred CCCCCceEeEEEEeCCEEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEE
Confidence 49999999999999999999999999999999998754 6899999999999999999999 9999999999999999
Q ss_pred CCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhh
Q 047800 396 DDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHW 475 (547)
Q Consensus 396 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~ 475 (547)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||........ ..
T Consensus 140 ~~~g~~kL~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~-- 213 (318)
T 1fot_A 140 DKNGHIKITDFGFAKYVPDV---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT-YE-- 213 (318)
T ss_dssp CTTSCEEECCCSSCEECSSC---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HH--
T ss_pred cCCCCEEEeecCcceecCCc---cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH-HH--
Confidence 99999999999999865432 2345799999999999999999999999999999999999999976432221 11
Q ss_pred hhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCC-----ChHHHHH
Q 047800 476 VNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRI-----NPKEIVT 533 (547)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp-----s~~eil~ 533 (547)
.+...... .+..+++++.+++.+||..||++|| +++|+++
T Consensus 214 ----------~i~~~~~~--------~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 214 ----------KILNAELR--------FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp ----------HHHHCCCC--------CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred ----------HHHhCCCC--------CCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 11111100 0112345689999999999999999 8888875
No 106
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=9.6e-35 Score=290.05 Aligned_cols=203 Identities=21% Similarity=0.374 Sum_probs=165.4
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCC-----------------------CCCCHHHHHHHHHHHHHHH
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGN-----------------------CSLDIFQRLNSMIDVALAL 372 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~-----------------------~~l~~~~~~~i~~~i~~~l 372 (547)
.||||+++++++.+.+..++||||+++|+|.+++.... ..+++.+++.++.|++.||
T Consensus 84 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l 163 (314)
T 2ivs_A 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGM 163 (314)
T ss_dssp CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHH
T ss_pred CCCceeeEEEEEecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHH
Confidence 49999999999999999999999999999999998643 2388999999999999999
Q ss_pred HHHHccCCCCccccCCCCCcEEeCCCCcEEEcccCCcccCCCCCc--ccccccCCCCCCCCCCCCCCCCCcchhHHHHHH
Q 047800 373 EYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSM--TQTQTLATIGYMAPEYGREGRVSANGDVYSFGI 450 (547)
Q Consensus 373 ~~lH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~ 450 (547)
+||| +++|+||||||+||+++.++.+||+|||+++....... ......+++.|+|||++.+..++.++||||+|+
T Consensus 164 ~~lH---~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ 240 (314)
T 2ivs_A 164 QYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGV 240 (314)
T ss_dssp HHHH---HTTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHH
T ss_pred HHHH---HCCCcccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHH
Confidence 9999 89999999999999999999999999999976543322 122335788899999998888999999999999
Q ss_pred HHHHHHh-CCCCCchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChH
Q 047800 451 MLMKTFI-GKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPK 529 (547)
Q Consensus 451 il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ 529 (547)
++|||++ |+.||......... . .+..... ...+..+++++.+++.+||+.||++|||+.
T Consensus 241 il~el~t~g~~p~~~~~~~~~~--~------------~~~~~~~------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ 300 (314)
T 2ivs_A 241 LLWEIVTLGGNPYPGIPPERLF--N------------LLKTGHR------MERPDNCSEEMYRLMLQCWKQEPDKRPVFA 300 (314)
T ss_dssp HHHHHHTTSCCSSTTCCGGGHH--H------------HHHTTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred HHHHHHhCCCCCCCCCCHHHHH--H------------HhhcCCc------CCCCccCCHHHHHHHHHHccCChhhCcCHH
Confidence 9999999 99999764332211 1 0110000 001122355689999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 047800 530 EIVTRLLKIIES 541 (547)
Q Consensus 530 eil~~L~~i~~~ 541 (547)
|+++.|+++.++
T Consensus 301 ~l~~~l~~~~~~ 312 (314)
T 2ivs_A 301 DISKDLEKMMVK 312 (314)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHhh
Confidence 999999988764
No 107
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=3e-34 Score=285.88 Aligned_cols=202 Identities=25% Similarity=0.347 Sum_probs=154.0
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCC--CCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEE
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGN--CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nil 394 (547)
||||+++++++.+. .++||||+++|+|.+++.... ..+++..++.++.|+++||+|||....++|+||||||+||+
T Consensus 60 hp~iv~~~~~~~~~--~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIl 137 (307)
T 2eva_A 60 HPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLL 137 (307)
T ss_dssp CTTBCCEEEBCTTT--TEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEE
T ss_pred CCCcCeEEEEEcCC--cEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEE
Confidence 99999999998853 799999999999999998754 24788999999999999999999221289999999999999
Q ss_pred eCCCCc-EEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhh
Q 047800 395 LDDNMV-AHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLK 473 (547)
Q Consensus 395 l~~~~~-~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~ 473 (547)
++.++. +||+|||++...... .....||+.|+|||++.+..++.++||||||+++|||++|+.||...........
T Consensus 138 l~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~ 214 (307)
T 2eva_A 138 LVAGGTVLKICDFGTACDIQTH---MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM 214 (307)
T ss_dssp EETTTTEEEECCCCC---------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHH
T ss_pred EeCCCCEEEEcccccccccccc---cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHH
Confidence 988776 799999999754332 2234689999999999998999999999999999999999999975432221111
Q ss_pred hhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHH
Q 047800 474 HWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIES 541 (547)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~ 541 (547)
...... . .. .....++..+.+++.+||+.||++|||++++++.|+.+.+.
T Consensus 215 ~~~~~~------------~--~~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 264 (307)
T 2eva_A 215 WAVHNG------------T--RP----PLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRY 264 (307)
T ss_dssp HHHHTT------------C--CC----CCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGG
T ss_pred HHHhcC------------C--CC----CcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 000000 0 00 00112345689999999999999999999999999987654
No 108
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=4.3e-34 Score=282.84 Aligned_cols=256 Identities=16% Similarity=0.172 Sum_probs=184.0
Q ss_pred ccCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCcccc
Q 047800 245 EILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPV 323 (547)
Q Consensus 245 ~~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l 323 (547)
...+.|.++.++......+...++.|..... .... .+..|+. +..++ |++++..
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~------------~~~~e~~~l~~l~----------~~~~i~~ 69 (296)
T 3uzp_A 15 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVK---TKHP------------QLHIESKIYKMMQ----------GGVGIPT 69 (296)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEEESC---SSCC------------HHHHHHHHHHHHT----------TSTTCCC
T ss_pred EEEccCCCeEEEEEEEcCCCcEEEEEEecCC---cchh------------HHHHHHHHHHHhh----------cCCCCCc
Confidence 3445577888877664433333443321100 0000 1445555 56666 7777666
Q ss_pred cccc-CccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeC---CCC
Q 047800 324 ATSC-SNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD---DNM 399 (547)
Q Consensus 324 ~~~~-~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~---~~~ 399 (547)
++++ ......++||||+ +|+|.+++......+++.+++.++.|++.||+||| +++|+||||||+||+++ .++
T Consensus 70 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~ 145 (296)
T 3uzp_A 70 IRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGN 145 (296)
T ss_dssp EEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTT
T ss_pred cccccCCCCceEEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCC
Confidence 6655 4557789999999 88999999866667999999999999999999999 99999999999999994 788
Q ss_pred cEEEcccCCcccCCCCCc-------ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhh
Q 047800 400 VAHLSDFGIAKTGEDQSM-------TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTL 472 (547)
Q Consensus 400 ~~kl~Dfg~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~ 472 (547)
.+||+|||+++....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||..........
T Consensus 146 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~ 225 (296)
T 3uzp_A 146 LVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ 225 (296)
T ss_dssp CEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSS
T ss_pred eEEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhh
Confidence 999999999986543322 1234579999999999999999999999999999999999999997643211100
Q ss_pred hhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHHH
Q 047800 473 KHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESL 542 (547)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~~ 542 (547)
....+.......... .....+++++.+++.+||+.||++|||+.++++.|+++.++.
T Consensus 226 ----------~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 282 (296)
T 3uzp_A 226 ----------KYERISEKKMSTPIE---VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp ----------HHHHHHHHHHHSCHH---HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred ----------hhhhhcccccCCchH---HHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhc
Confidence 000111110000000 001223467999999999999999999999999999988764
No 109
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=8.5e-35 Score=297.75 Aligned_cols=195 Identities=21% Similarity=0.282 Sum_probs=156.8
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
+|||||++++++.+....++||||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||++
T Consensus 73 ~hp~Iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll 148 (384)
T 4fr4_A 73 EHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNV-HFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILL 148 (384)
T ss_dssp CCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEE
T ss_pred CCCCCCcEEEEEEeCCEEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEE
Confidence 39999999999999999999999999999999998754 6999999999999999999999 9999999999999999
Q ss_pred CCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCC---CCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhh
Q 047800 396 DDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGRE---GRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTL 472 (547)
Q Consensus 396 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~ 472 (547)
+.++.+||+|||+++...... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.........
T Consensus 149 ~~~g~vkL~DFG~a~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~- 226 (384)
T 4fr4_A 149 DEHGHVHITDFNIAAMLPRET-QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSK- 226 (384)
T ss_dssp CTTSCEEECCCTTCEECCTTC-CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHH-
T ss_pred CCCCCEEEeccceeeeccCCC-ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHH-
Confidence 999999999999998654332 2344579999999999974 45899999999999999999999999753221110
Q ss_pred hhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCC-hHHHHH
Q 047800 473 KHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRIN-PKEIVT 533 (547)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps-~~eil~ 533 (547)
... ..+..... ..+..++.++.+++.+||..||++||+ ++++.+
T Consensus 227 -~~~---------~~~~~~~~-------~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 227 -EIV---------HTFETTVV-------TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp -HHH---------HHHHHCCC-------CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred -HHH---------HHHhhccc-------CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 000 00000000 011223567899999999999999998 666543
No 110
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=5.2e-35 Score=300.19 Aligned_cols=198 Identities=19% Similarity=0.241 Sum_probs=160.6
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
.||||+++++++.+....++||||+++|+|.+++......+++.++..++.|++.||+||| +.+|+||||||+||++
T Consensus 106 ~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll 182 (387)
T 1kob_A 106 HHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMC 182 (387)
T ss_dssp CSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEE
T ss_pred CCcCCCeEEEEEEeCCEEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEE
Confidence 4999999999999999999999999999999999876667999999999999999999999 9999999999999999
Q ss_pred CC--CCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhh
Q 047800 396 DD--NMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLK 473 (547)
Q Consensus 396 ~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~ 473 (547)
+. .+.+||+|||+++....... .....||+.|+|||++.+..++.++||||+||++|||++|+.||......+. ..
T Consensus 183 ~~~~~~~vkL~DFG~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~-~~ 260 (387)
T 1kob_A 183 ETKKASSVKIIDFGLATKLNPDEI-VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLET-LQ 260 (387)
T ss_dssp SSTTCCCEEECCCTTCEECCTTSC-EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HH
T ss_pred ecCCCCceEEEecccceecCCCcc-eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHH-HH
Confidence 74 57899999999987654322 2334799999999999998999999999999999999999999976432221 11
Q ss_pred hhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 474 HWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
..... ...... .....+++++.+++.+||..||++|||+.|+++.
T Consensus 261 ~i~~~------------~~~~~~----~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 261 NVKRC------------DWEFDE----DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp HHHHC------------CCCCCS----STTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HHHhC------------CCCCCc----cccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 11000 000000 0011234568999999999999999999999864
No 111
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=6.1e-35 Score=293.54 Aligned_cols=203 Identities=26% Similarity=0.413 Sum_probs=163.9
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCC---------------CCCCHHHHHHHHHHHHHHHHHHHccCC
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGN---------------CSLDIFQRLNSMIDVALALEYMHFGYS 380 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~i~~~l~~lH~~~~ 380 (547)
.||||+++++++.+.+..++||||+++|+|.+++.... ..+++.+++.++.|++.||+||| +
T Consensus 84 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~ 160 (327)
T 1fvr_A 84 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---Q 160 (327)
T ss_dssp CCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---H
T ss_pred CCCchhhhceeeeeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---h
Confidence 59999999999999999999999999999999997653 36899999999999999999999 9
Q ss_pred CCccccCCCCCcEEeCCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHh-CC
Q 047800 381 APVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFI-GK 459 (547)
Q Consensus 381 ~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ellt-g~ 459 (547)
++|+||||||+||+++.++.+||+|||+++...... ......+++.|+|||++.+..++.++||||+|+++|||++ |+
T Consensus 161 ~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~ 239 (327)
T 1fvr_A 161 KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV-KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGG 239 (327)
T ss_dssp TTEECSCCSGGGEEECGGGCEEECCTTCEESSCEEC-CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSC
T ss_pred CCccCCCCccceEEEcCCCeEEEcccCcCccccccc-cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCC
Confidence 999999999999999999999999999987433221 1223357889999999988889999999999999999998 99
Q ss_pred CCCchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHH
Q 047800 460 KPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKII 539 (547)
Q Consensus 460 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~ 539 (547)
.||......... ... ..... ...+..+++++.+++.+||..||++|||++++++.|+++.
T Consensus 240 ~pf~~~~~~~~~-~~~-------------~~~~~------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 299 (327)
T 1fvr_A 240 TPYCGMTCAELY-EKL-------------PQGYR------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 299 (327)
T ss_dssp CTTTTCCHHHHH-HHG-------------GGTCC------CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCcHHHHH-HHh-------------hcCCC------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 999764332211 100 00000 0001123456899999999999999999999999999987
Q ss_pred HHH
Q 047800 540 ESL 542 (547)
Q Consensus 540 ~~~ 542 (547)
++.
T Consensus 300 ~~~ 302 (327)
T 1fvr_A 300 EER 302 (327)
T ss_dssp HSS
T ss_pred Hhh
Confidence 753
No 112
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.2e-34 Score=286.13 Aligned_cols=215 Identities=19% Similarity=0.229 Sum_probs=156.7
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
.||||+++++++..++..++||||+++ +|.+++......+++.++..++.|++.||+||| +++|+||||||+||++
T Consensus 58 ~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~ 133 (288)
T 1ob3_A 58 KHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLI 133 (288)
T ss_dssp CCTTBCCEEEEEECSSCEEEEEECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEE
T ss_pred CCCCEeeeeeEEccCCeEEEEEEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEE
Confidence 399999999999999999999999975 999999876667999999999999999999999 9999999999999999
Q ss_pred CCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCC-CCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhh
Q 047800 396 DDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKH 474 (547)
Q Consensus 396 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~ 474 (547)
+.++.+||+|||+++.............||+.|+|||++.+. .++.++||||+||++|||++|+.||......+.....
T Consensus 134 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~ 213 (288)
T 1ob3_A 134 NREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRI 213 (288)
T ss_dssp CTTSCEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred cCCCCEEEeECccccccCccccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 999999999999997654333233445789999999999764 5899999999999999999999999765433221111
Q ss_pred hh--hhccCchhhhh-----hhhhhccchhh-hhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 475 WV--NDWLPISIMEV-----IDANLLSREDI-HFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 475 ~~--~~~~~~~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
+. ........... .++........ .......+++++.+++.+||+.||++|||++|+++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 214 FRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp HHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 10 00000000000 00000000000 000011235568999999999999999999999763
No 113
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.3e-34 Score=282.07 Aligned_cols=202 Identities=27% Similarity=0.417 Sum_probs=165.6
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~ 396 (547)
||||+++++++.+++..++||||+++|+|.+++......+++..+..++.|++.||+||| +++++|+||||+||+++
T Consensus 62 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~ 138 (267)
T 3t9t_A 62 HPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVG 138 (267)
T ss_dssp CTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEEC
T ss_pred CCCEeeEEEEEccCCCeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEC
Confidence 999999999999999999999999999999999887667999999999999999999999 99999999999999999
Q ss_pred CCCcEEEcccCCcccCCCCC-cccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCchhhhhhhhhhh
Q 047800 397 DNMVAHLSDFGIAKTGEDQS-MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFI-GKKPTDEIFNEEMTLKH 474 (547)
Q Consensus 397 ~~~~~kl~Dfg~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ellt-g~~p~~~~~~~~~~~~~ 474 (547)
.++.+|++|||.++...... .......++..|+|||++.+..++.++||||+|+++|||++ |+.||......... ..
T Consensus 139 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~-~~ 217 (267)
T 3t9t_A 139 ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV-ED 217 (267)
T ss_dssp GGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH-HH
T ss_pred CCCCEEEcccccccccccccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHH-HH
Confidence 99999999999997654321 11223357788999999988889999999999999999999 89999764322211 11
Q ss_pred hhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHH
Q 047800 475 WVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIES 541 (547)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~ 541 (547)
.... .. ...+..++..+.+++.+||..||++|||+.++++.|+++.++
T Consensus 218 i~~~-------------~~------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 218 ISTG-------------FR------LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp HHTT-------------CC------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HhcC-------------Cc------CCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 0000 00 000111245689999999999999999999999999998764
No 114
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=2.4e-34 Score=280.71 Aligned_cols=200 Identities=22% Similarity=0.321 Sum_probs=161.3
Q ss_pred CCCCCCccccccccCcc--ceeEEEEeccCCCChhHHhhhCCC-CCCHHHHHHHHHHHHHHHHHHHccCCCC--ccccCC
Q 047800 314 PSNDANISPVATSCSNE--EFKALILEYKPHGSLEKYLYSGNC-SLDIFQRLNSMIDVALALEYMHFGYSAP--VIHCDI 388 (547)
Q Consensus 314 ~~~H~nIv~l~~~~~~~--~~~~lv~ey~~~gsL~~~l~~~~~-~l~~~~~~~i~~~i~~~l~~lH~~~~~~--i~H~dl 388 (547)
...||||+++++++.+. +..++||||+++|+|.+++..... .+++.+++.++.|++.||+||| +++ ++||||
T Consensus 63 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~di 139 (271)
T 3kmu_A 63 IFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHAL 139 (271)
T ss_dssp CCSCTTEECEEEEECTTTSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCC
T ss_pred hcCCCchhheEEEEccCCCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCC
Confidence 34599999999999877 788999999999999999987643 5899999999999999999999 888 999999
Q ss_pred CCCcEEeCCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCc---chhHHHHHHHHHHHHhCCCCCchh
Q 047800 389 KANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSA---NGDVYSFGIMLMKTFIGKKPTDEI 465 (547)
Q Consensus 389 kp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~sDv~s~G~il~elltg~~p~~~~ 465 (547)
||+||+++.++.++++|||++..... ....||+.|+|||++.+..++. ++||||+|+++|||++|+.||...
T Consensus 140 kp~Nil~~~~~~~~l~~~~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 214 (271)
T 3kmu_A 140 NSRSVMIDEDMTARISMADVKFSFQS-----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADL 214 (271)
T ss_dssp SGGGEEECTTSCEEEEGGGSCCTTSC-----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTS
T ss_pred ccceEEEcCCcceeEEeccceeeecc-----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence 99999999999999999888754322 2346899999999998765544 799999999999999999999764
Q ss_pred hhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHH
Q 047800 466 FNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIE 540 (547)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~ 540 (547)
.............. . ...+..+++++.+++.+||+.||++|||++++++.|+++.+
T Consensus 215 ~~~~~~~~~~~~~~-------------~------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 215 SNMEIGMKVALEGL-------------R------PTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp CHHHHHHHHHHSCC-------------C------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred ChHHHHHHHHhcCC-------------C------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 43332111110000 0 00112234568999999999999999999999999998754
No 115
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.9e-34 Score=290.47 Aligned_cols=192 Identities=24% Similarity=0.371 Sum_probs=157.5
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
.||||+++++++..+...++||||+ +|+|.+++.... .+++.++..++.|++.||+||| +.+|+||||||+||++
T Consensus 67 ~hpnIv~l~~~~~~~~~~~lv~E~~-~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll 141 (336)
T 3h4j_B 67 RHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLL 141 (336)
T ss_dssp CCTTBCCEEEEEECSSEEEEEECCC-CEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEE
T ss_pred CCCCCCeEEEEEEeCCEEEEEEECC-CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEE
Confidence 3999999999999999999999999 789999887654 6999999999999999999999 8999999999999999
Q ss_pred CCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCC-CcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhh
Q 047800 396 DDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKH 474 (547)
Q Consensus 396 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~ 474 (547)
+.++.+||+|||++....... ......||+.|+|||++.+..+ +.++||||+||++|||++|+.||..........
T Consensus 142 ~~~~~~kl~DFG~s~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~-- 218 (336)
T 3h4j_B 142 DDNLNVKIADFGLSNIMTDGN-FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK-- 218 (336)
T ss_dssp CTTCCEEECCSSCTBTTTTSB-TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBC--
T ss_pred cCCCCEEEEEeccceeccCCc-ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHH--
Confidence 999999999999998655433 2334579999999999988776 789999999999999999999997632221100
Q ss_pred hhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 475 WVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
. +.... ...++.+++++.+++.+||..||.+|||++|+++.
T Consensus 219 ---~---------i~~~~-------~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 219 ---K---------VNSCV-------YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp ---C---------CCSSC-------CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred ---H---------HHcCC-------CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 0 00000 00112234568999999999999999999999864
No 116
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=2.6e-34 Score=283.69 Aligned_cols=205 Identities=22% Similarity=0.336 Sum_probs=152.5
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
.||||+++++++. ....++||||+++++|.+++......+++.+++.++.|++.||+||| +.+|+||||||+||++
T Consensus 78 ~h~~iv~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~ 153 (289)
T 3og7_A 78 RHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFL 153 (289)
T ss_dssp CCTTBCCEEEEEC-SSSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEE
T ss_pred CCCcEEEEEeecc-CCccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEE
Confidence 3999999999764 45689999999999999999877667999999999999999999999 9999999999999999
Q ss_pred CCCCcEEEcccCCcccCCCC--CcccccccCCCCCCCCCCCC---CCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhh
Q 047800 396 DDNMVAHLSDFGIAKTGEDQ--SMTQTQTLATIGYMAPEYGR---EGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEM 470 (547)
Q Consensus 396 ~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~ 470 (547)
+.++.+||+|||+++..... ........||+.|+|||++. +..++.++||||+|+++|||++|+.||........
T Consensus 154 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~ 233 (289)
T 3og7_A 154 HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 233 (289)
T ss_dssp ETTTEEEECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHH
T ss_pred CCCCCEEEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHH
Confidence 99999999999999754321 11223346899999999986 56688999999999999999999999976443332
Q ss_pred hhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHH
Q 047800 471 TLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKII 539 (547)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~ 539 (547)
............... .....+++++.+++.+||+.||++|||+.+++++|+++.
T Consensus 234 ~~~~~~~~~~~~~~~---------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 234 IIEMVGRGSLSPDLS---------------KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp HHHHHHHTSCCCCTT---------------SSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred HHHHhcccccCcchh---------------hccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 211111111000000 001223467899999999999999999999999998764
No 117
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=4.8e-35 Score=307.29 Aligned_cols=246 Identities=23% Similarity=0.361 Sum_probs=180.1
Q ss_pred cCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCccccc
Q 047800 246 ILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPVA 324 (547)
Q Consensus 246 ~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l~ 324 (547)
..+.|.|+.++.....+.. .++++........ ...+..|+. +..++ ||||++++
T Consensus 191 ~lG~G~fg~Vy~~~~~~~~-~vavK~~~~~~~~--------------~~~~~~E~~~l~~l~----------hp~iv~~~ 245 (452)
T 1fmk_A 191 KLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMS--------------PEAFLQEAQVMKKLR----------HEKLVQLY 245 (452)
T ss_dssp EEEECSSCEEEEEEETTTE-EEEEEECCTTSSC--------------HHHHHHHHHHHHHCC----------CTTBCCEE
T ss_pred eecCCCCeEEEEEEECCCc-eEEEEEeccCCCC--------------HHHHHHHHHHHHhCC----------CCCEeeEE
Confidence 3455889998887665432 2444322111000 112556666 66666 99999999
Q ss_pred cccCccceeEEEEeccCCCChhHHhhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCCcEEE
Q 047800 325 TSCSNEEFKALILEYKPHGSLEKYLYSG-NCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHL 403 (547)
Q Consensus 325 ~~~~~~~~~~lv~ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~~~kl 403 (547)
+++.+ +..++||||+++|+|.+++... ...+++.++..++.|++.||+||| +++|+||||||+||+++.++.+||
T Consensus 246 ~~~~~-~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl 321 (452)
T 1fmk_A 246 AVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKV 321 (452)
T ss_dssp EEECS-SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcC-CceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEE
Confidence 99877 6689999999999999999753 235899999999999999999999 999999999999999999999999
Q ss_pred cccCCcccCCCCCc-ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCchhhhhhhhhhhhhhhccC
Q 047800 404 SDFGIAKTGEDQSM-TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFI-GKKPTDEIFNEEMTLKHWVNDWLP 481 (547)
Q Consensus 404 ~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 481 (547)
+|||+++....... ......++..|+|||++.+..++.++||||||+++|||++ |+.||......+.. ..
T Consensus 322 ~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~-~~------- 393 (452)
T 1fmk_A 322 ADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-DQ------- 393 (452)
T ss_dssp CCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH-HH-------
T ss_pred CCCccceecCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHH-HH-------
Confidence 99999986543221 1223356788999999998899999999999999999999 99999764332211 10
Q ss_pred chhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHH
Q 047800 482 ISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIE 540 (547)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~ 540 (547)
+... .+...+..+++.+.+++.+||+.||++|||++++++.|+.+..
T Consensus 394 ------i~~~------~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~ 440 (452)
T 1fmk_A 394 ------VERG------YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 440 (452)
T ss_dssp ------HHTT------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred ------HHcC------CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhc
Confidence 0000 0011112345678999999999999999999999999987643
No 118
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=3.6e-34 Score=290.43 Aligned_cols=194 Identities=18% Similarity=0.303 Sum_probs=159.5
Q ss_pred CCCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEE
Q 047800 315 SNDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394 (547)
Q Consensus 315 ~~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nil 394 (547)
..||||+++++++.+.+..++||||+++|+|.+++...+ .+++.+++.++.|++.||+||| +++|+||||||+||+
T Consensus 78 ~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIl 153 (353)
T 2i0e_A 78 GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVM 153 (353)
T ss_dssp TCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEE
T ss_pred CCCCEEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEE
Confidence 359999999999999999999999999999999998754 6999999999999999999999 999999999999999
Q ss_pred eCCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhh
Q 047800 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKH 474 (547)
Q Consensus 395 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~ 474 (547)
++.++.+||+|||+++............+||+.|+|||++.+..++.++||||+||++|||++|+.||......+. ...
T Consensus 154 l~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~-~~~ 232 (353)
T 2i0e_A 154 LDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL-FQS 232 (353)
T ss_dssp ECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHH
T ss_pred EcCCCcEEEEeCCcccccccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHH-HHH
Confidence 9999999999999998644333334456799999999999999999999999999999999999999976432221 111
Q ss_pred hhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCC-----hHHHHH
Q 047800 475 WVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRIN-----PKEIVT 533 (547)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps-----~~eil~ 533 (547)
+..... ..+..++.++.+++.+||..||++||+ ++++++
T Consensus 233 ------------i~~~~~--------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 233 ------------IMEHNV--------AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp ------------HHHCCC--------CCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred ------------HHhCCC--------CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 111100 001223566899999999999999996 466654
No 119
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=2.1e-34 Score=289.67 Aligned_cols=178 Identities=19% Similarity=0.286 Sum_probs=139.2
Q ss_pred eeEEEEeccCCCChhHHhhhCC--CCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCCcEEEcccCCc
Q 047800 332 FKALILEYKPHGSLEKYLYSGN--CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIA 409 (547)
Q Consensus 332 ~~~lv~ey~~~gsL~~~l~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a 409 (547)
..++||||+++|+|.+++.... ...++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++
T Consensus 135 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 211 (332)
T 3qd2_B 135 YLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLV 211 (332)
T ss_dssp EEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcc
Confidence 3799999999999999998754 34566779999999999999999 999999999999999999999999999999
Q ss_pred ccCCCCC------------cccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhhh
Q 047800 410 KTGEDQS------------MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVN 477 (547)
Q Consensus 410 ~~~~~~~------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~ 477 (547)
+...... .......||+.|+|||++.+..++.++||||+||++|||++|..|+...... .....
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~---~~~~~- 287 (332)
T 3qd2_B 212 TAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRI---ITDVR- 287 (332)
T ss_dssp EECSCC--------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHH---HHHHH-
T ss_pred cccccchhhccccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHH---HHHhh-
Confidence 8655432 1123346999999999999989999999999999999999998875432110 00000
Q ss_pred hccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 478 DWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
.. . .........+++.+++.+||+.||++|||+.|+++.
T Consensus 288 -----------~~----~---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 288 -----------NL----K---FPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp -----------TT----C---CCHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred -----------cc----C---CCcccccCChhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence 00 0 001112334567899999999999999999999863
No 120
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=6.4e-35 Score=303.58 Aligned_cols=249 Identities=16% Similarity=0.201 Sum_probs=181.5
Q ss_pred cCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCccccc
Q 047800 246 ILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPVA 324 (547)
Q Consensus 246 ~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l~ 324 (547)
..+.|.|+.++......+...++.|............ ...+..|.. +..++ ||||++++
T Consensus 81 ~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~----------~~~~~~E~~il~~~~----------hp~Iv~l~ 140 (437)
T 4aw2_A 81 VIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAE----------TACFREERDVLVNGD----------SKWITTLH 140 (437)
T ss_dssp EEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTT----------TCCHHHHHHHHHHSC----------TTTBCCEE
T ss_pred EEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHH----------HHHHHHHHHHHHhCC----------CCCEEEEE
Confidence 4455889988887766554445544211000000000 000344444 43444 99999999
Q ss_pred cccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCCcEEEc
Q 047800 325 TSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLS 404 (547)
Q Consensus 325 ~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~~~kl~ 404 (547)
++|.+++..++||||+++|+|.+++......+++..++.++.|++.||+||| +.+|+||||||+|||++.++.+||+
T Consensus 141 ~~~~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~ 217 (437)
T 4aw2_A 141 YAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLA 217 (437)
T ss_dssp EEEECSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEEC
T ss_pred EEEeeCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEc
Confidence 9999999999999999999999999885557999999999999999999999 9999999999999999999999999
Q ss_pred ccCCcccCCCCCc-ccccccCCCCCCCCCCCC-----CCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhhhh
Q 047800 405 DFGIAKTGEDQSM-TQTQTLATIGYMAPEYGR-----EGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVND 478 (547)
Q Consensus 405 Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~-----~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~ 478 (547)
|||+++....... .....+||+.|+|||++. +..++.++||||+||++|||++|+.||......+.. ..
T Consensus 218 DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~-~~---- 292 (437)
T 4aw2_A 218 DFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETY-GK---- 292 (437)
T ss_dssp CCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH-HH----
T ss_pred chhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHH-Hh----
Confidence 9999976543322 233457999999999987 456899999999999999999999999764332221 11
Q ss_pred ccCchhhhhhhhhh-ccchhhhhhcHHHHHHHHHHHHhhhcCcCCCC--CCChHHHHHH
Q 047800 479 WLPISIMEVIDANL-LSREDIHFVAKEQFMSFVFNLAMECTVESPEQ--RINPKEIVTR 534 (547)
Q Consensus 479 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~--Rps~~eil~~ 534 (547)
++.... ...+.. ...+++++.+++.+||..+|++ ||+++|+++.
T Consensus 293 --------i~~~~~~~~~p~~----~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 293 --------IMNHKERFQFPTQ----VTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp --------HHTHHHHCCCCSS----CCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred --------hhhccccccCCcc----cccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 110000 000000 0113456899999999888888 9999998753
No 121
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=9.3e-35 Score=316.58 Aligned_cols=212 Identities=23% Similarity=0.343 Sum_probs=167.6
Q ss_pred HHHHHH-HHHHHHhhcCCCCCCCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHH
Q 047800 296 FMIVVI-LLILRCRKRGKRPSNDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEY 374 (547)
Q Consensus 296 ~~~~~~-~~~~~~~~~~~~~~~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~ 374 (547)
+..|+. +..++ |||||+++++|.. +..++||||+++|+|.+++.... .+++.+++.++.||+.||+|
T Consensus 417 ~~~E~~il~~l~----------hpnIv~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~y 484 (635)
T 4fl3_A 417 LLAEANVMQQLD----------NPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKY 484 (635)
T ss_dssp HHHHHHHHHHCC----------CTTBCCEEEEEES-SSEEEEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC----------CCCEeeEEEEEec-CCEEEEEEccCCCCHHHHHhhCC-CCCHHHHHHHHHHHHHHHHH
Confidence 555555 55556 9999999999965 45889999999999999998754 69999999999999999999
Q ss_pred HHccCCCCccccCCCCCcEEeCCCCcEEEcccCCcccCCCCCc---ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHH
Q 047800 375 MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSM---TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIM 451 (547)
Q Consensus 375 lH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~i 451 (547)
|| +++|+||||||+||+++.++.+||+|||+++....... ......+|+.|+|||++.+..++.++|||||||+
T Consensus 485 LH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~ 561 (635)
T 4fl3_A 485 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVL 561 (635)
T ss_dssp HH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHH
T ss_pred HH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHH
Confidence 99 99999999999999999999999999999986543321 1222356788999999998899999999999999
Q ss_pred HHHHHh-CCCCCchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHH
Q 047800 452 LMKTFI-GKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKE 530 (547)
Q Consensus 452 l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~e 530 (547)
+|||++ |+.||......+.. . .+.... ....+..++.++.+++.+||+.||++|||+.+
T Consensus 562 l~ellt~G~~Pf~~~~~~~~~--~------------~i~~~~------~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~ 621 (635)
T 4fl3_A 562 MWEAFSYGQKPYRGMKGSEVT--A------------MLEKGE------RMGCPAGCPREMYDLMNLCWTYDVENRPGFAA 621 (635)
T ss_dssp HHHHHTTTCCSSTTCCHHHHH--H------------HHHTTC------CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred HHHHHhCCCCCCCCCCHHHHH--H------------HHHcCC------CCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHH
Confidence 999998 99999764433211 1 111100 00111234567999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 047800 531 IVTRLLKIIESL 542 (547)
Q Consensus 531 il~~L~~i~~~~ 542 (547)
++++|+.+..++
T Consensus 622 l~~~L~~~~~~l 633 (635)
T 4fl3_A 622 VELRLRNYYYDV 633 (635)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999987765
No 122
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.9e-34 Score=287.65 Aligned_cols=212 Identities=18% Similarity=0.243 Sum_probs=154.8
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~ 396 (547)
||||+++++++...+..++||||+++++|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||+++
T Consensus 61 h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~ 136 (311)
T 4agu_A 61 HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQR-GVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILIT 136 (311)
T ss_dssp CTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTSS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEC
T ss_pred CCCccchhheeecCCeEEEEEEeCCCchHHHHHhhhc-CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEc
Confidence 9999999999999999999999999999999887654 6999999999999999999999 99999999999999999
Q ss_pred CCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhh--h
Q 047800 397 DNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTL--K 473 (547)
Q Consensus 397 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~--~ 473 (547)
.++.+||+|||.++.............||+.|+|||++.+ ..++.++||||+|+++|||++|+.||......+... .
T Consensus 137 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 216 (311)
T 4agu_A 137 KHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIR 216 (311)
T ss_dssp TTSCEEECCCTTCEECC------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred CCCCEEEeeCCCchhccCcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9999999999999876544333445578999999999876 568999999999999999999999997754332211 1
Q ss_pred hhhhhccCchhhhhhhhh-h-----ccc----hhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 474 HWVNDWLPISIMEVIDAN-L-----LSR----EDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~-~-----~~~----~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
.......+. ....+... . ... ..... ....++.++.+++.+||+.||++|||++|+++.
T Consensus 217 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 217 KTLGDLIPR-HQQVFSTNQYFSGVKIPDPEDMEPLEL-KFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp HHHCSCCHH-HHHHHHTCGGGTTCCCCCCSSCCCHHH-HCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred HHhcccccc-cccccccccccccCcCCCccccchhhh-hcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 111111110 00000000 0 000 00000 001235568999999999999999999999853
No 123
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=2.6e-34 Score=291.22 Aligned_cols=209 Identities=16% Similarity=0.173 Sum_probs=162.9
Q ss_pred CCCCCccccccccCc----cceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCC
Q 047800 315 SNDANISPVATSCSN----EEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKA 390 (547)
Q Consensus 315 ~~H~nIv~l~~~~~~----~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp 390 (547)
..||||+++++++.. ....++||||+ +++|.+++.... .+++.+++.++.|++.||+||| +++|+||||||
T Consensus 105 l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp 179 (345)
T 2v62_A 105 LDYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKA 179 (345)
T ss_dssp CSCCCCCCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred ccccCcceeecccccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCH
Confidence 359999999999887 67899999999 999999998765 7999999999999999999999 89999999999
Q ss_pred CcEEeCCCC--cEEEcccCCcccCCCCCc-------ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCC
Q 047800 391 NNVLLDDNM--VAHLSDFGIAKTGEDQSM-------TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461 (547)
Q Consensus 391 ~Nill~~~~--~~kl~Dfg~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p 461 (547)
+||+++.++ .+||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 180 ~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p 259 (345)
T 2v62_A 180 ANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLP 259 (345)
T ss_dssp GGEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred HHEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 999998877 999999999976532211 12344799999999999998899999999999999999999999
Q ss_pred CchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHH
Q 047800 462 TDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKI 538 (547)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i 538 (547)
|.................... ....+. .......++.++.+++.+||..||++|||++++++.|+.+
T Consensus 260 f~~~~~~~~~~~~~~~~~~~~-~~~~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 326 (345)
T 2v62_A 260 WEQNLKDPVAVQTAKTNLLDE-LPQSVL---------KWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPH 326 (345)
T ss_dssp TGGGTTCHHHHHHHHHHHHHT-TTHHHH---------HHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTT
T ss_pred ccccccccHHHHHHHHhhccc-ccHHHH---------hhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhcc
Confidence 965332222211111110000 000000 0000012355799999999999999999999999998754
No 124
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.4e-34 Score=287.34 Aligned_cols=244 Identities=18% Similarity=0.229 Sum_probs=175.4
Q ss_pred cCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCccccc
Q 047800 246 ILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPVA 324 (547)
Q Consensus 246 ~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l~ 324 (547)
..+.|.++.++......+...++.+........ . ..-+..|+. +..++ ||||++++
T Consensus 26 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~------------~~~~~~e~~~l~~l~----------h~~i~~~~ 82 (302)
T 2j7t_A 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEE-E------------LEDYIVEIEILATCD----------HPYIVKLL 82 (302)
T ss_dssp EEECSTTCCEEEEEETTTCCEEEEEEEC----C-C------------HHHHHHHHHHHHHCC----------CTTBCCEE
T ss_pred eeccCCCeEEEEEEEcCCCcEEEEEEecCCCHH-H------------HHHHHHHHHHHhcCC----------CCCEeeee
Confidence 345578888887766554444443321110000 0 011444544 44444 99999999
Q ss_pred cccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCCcEEEc
Q 047800 325 TSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLS 404 (547)
Q Consensus 325 ~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~~~kl~ 404 (547)
+++..++..++||||+++|+|.+++......+++.++..++.|++.||.||| +.+++|+||||+||+++.++.+||+
T Consensus 83 ~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~ 159 (302)
T 2j7t_A 83 GAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLA 159 (302)
T ss_dssp EEEECC-CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEEC
T ss_pred eeeeeCCeEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEE
Confidence 9999999999999999999999999875557999999999999999999999 8999999999999999999999999
Q ss_pred ccCCcccCCCCCcccccccCCCCCCCCCCC-----CCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhhhhc
Q 047800 405 DFGIAKTGEDQSMTQTQTLATIGYMAPEYG-----REGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDW 479 (547)
Q Consensus 405 Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~ 479 (547)
|||++..............||+.|+|||++ .+..++.++||||+|+++|||++|+.||......... .......
T Consensus 160 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~ 238 (302)
T 2j7t_A 160 DFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVL-LKIAKSD 238 (302)
T ss_dssp CCHHHHHHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-HHHHHSC
T ss_pred ECCCCccccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHH-HHHhccC
Confidence 999875322111122334689999999988 4667899999999999999999999999764332211 1111000
Q ss_pred cCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHH
Q 047800 480 LPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVT 533 (547)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~ 533 (547)
.+ ....+..++.++.+++.+||..||++|||+.++++
T Consensus 239 ~~-----------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 239 PP-----------------TLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp CC-----------------CCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred Cc-----------------ccCCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 00 00111223456899999999999999999999986
No 125
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=6.9e-34 Score=285.10 Aligned_cols=250 Identities=20% Similarity=0.207 Sum_probs=182.5
Q ss_pred cCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCccccc
Q 047800 246 ILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPVA 324 (547)
Q Consensus 246 ~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l~ 324 (547)
..+.|.++.++......+...++.+............ .. ....+..|+. +..++ ||||++++
T Consensus 19 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~------~~-~~~~~~~E~~~l~~l~----------h~~iv~~~ 81 (321)
T 2a2a_A 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRR------GV-SREEIEREVSILRQVL----------HHNVITLH 81 (321)
T ss_dssp EEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSS------SB-CHHHHHHHHHHHHHCC----------CTTBCCEE
T ss_pred EeeecCCEEEEEEEECCCCeEEEEEEEeccccccccc------ch-hHHHHHHHHHHHHhCC----------CCCcceEE
Confidence 3455778888877665544445444211110000000 00 0111445555 55555 99999999
Q ss_pred cccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCC----c
Q 047800 325 TSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNM----V 400 (547)
Q Consensus 325 ~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~----~ 400 (547)
+++.+....++||||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .
T Consensus 82 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~ 157 (321)
T 2a2a_A 82 DVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPH 157 (321)
T ss_dssp EEEECSSEEEEEECCCCSCBHHHHHHTCS-CEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCC
T ss_pred EEEecCCEEEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCC
Confidence 99999999999999999999999998754 6899999999999999999999 99999999999999999887 7
Q ss_pred EEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhhhhcc
Q 047800 401 AHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWL 480 (547)
Q Consensus 401 ~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 480 (547)
+||+|||+++...... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||......+. .......
T Consensus 158 ~kl~Dfg~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~i~~~-- 233 (321)
T 2a2a_A 158 IKLIDFGLAHEIEDGV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET-LANITSV-- 233 (321)
T ss_dssp EEECCCTTCEECCTTC-CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HHHHHTT--
T ss_pred EEEccCccceecCccc-cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHhc--
Confidence 9999999998655432 22345799999999999988999999999999999999999999976433221 1111000
Q ss_pred CchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 481 PISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
...... .....++..+.+++.+||..||++|||+.|+++.
T Consensus 234 ----------~~~~~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 234 ----------SYDFDE----EFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp ----------CCCCCH----HHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred ----------ccccCh----hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000000 0011234568999999999999999999999863
No 126
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1e-34 Score=286.43 Aligned_cols=197 Identities=21% Similarity=0.295 Sum_probs=157.9
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~ 396 (547)
||||+++++++.+++..++||||+++|+|.+++......+++..++.++.|++.||+||| +++|+||||||+||+++
T Consensus 71 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~ 147 (289)
T 4fvq_A 71 HKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLI 147 (289)
T ss_dssp CTTBCCEEEEECCTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE
T ss_pred CCCEeEEEEEEEeCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEe
Confidence 999999999999999999999999999999999887656999999999999999999999 99999999999999998
Q ss_pred CCCc--------EEEcccCCcccCCCCCcccccccCCCCCCCCCCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCchhhh
Q 047800 397 DNMV--------AHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMKTFIGKKPTDEIFN 467 (547)
Q Consensus 397 ~~~~--------~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~s~G~il~elltg~~p~~~~~~ 467 (547)
.++. +|++|||.+...... ....||+.|+|||++.+ ..++.++||||+|+++|||++|..|+.....
T Consensus 148 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~ 223 (289)
T 4fvq_A 148 REEDRKTGNPPFIKLSDPGISITVLPK----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALD 223 (289)
T ss_dssp ECCBGGGTBCCEEEECCCCSCTTTSCH----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred cCCcccccccceeeeccCcccccccCc----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccc
Confidence 8876 999999998754332 22357899999999987 6689999999999999999996555433222
Q ss_pred hhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHH
Q 047800 468 EEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIES 541 (547)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~ 541 (547)
.......+... .... ...+.++.+++.+||+.||++|||+.|+++.|+++...
T Consensus 224 ~~~~~~~~~~~-------------~~~~--------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p 276 (289)
T 4fvq_A 224 SQRKLQFYEDR-------------HQLP--------APKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP 276 (289)
T ss_dssp HHHHHHHHHTT-------------CCCC--------CCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred hHHHHHHhhcc-------------CCCC--------CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence 21111110000 0000 01133578899999999999999999999999887553
No 127
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.3e-34 Score=293.46 Aligned_cols=190 Identities=18% Similarity=0.214 Sum_probs=158.7
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
+||||+++++++.+....++||||+++|+|.+++.... .+++.++..++.|++.||+||| +++|+||||||+||++
T Consensus 99 ~hp~iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll 174 (350)
T 1rdq_E 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLI 174 (350)
T ss_dssp CCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEE
T ss_pred CCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEE
Confidence 59999999999999999999999999999999998754 5999999999999999999999 9999999999999999
Q ss_pred CCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhh
Q 047800 396 DDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHW 475 (547)
Q Consensus 396 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~ 475 (547)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||......+. ...
T Consensus 175 ~~~g~~kL~DFg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~~~- 249 (350)
T 1rdq_E 175 DQQGYIQVTDFGFAKRVKGR---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI-YEK- 249 (350)
T ss_dssp CTTSCEEECCCTTCEECSSC---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHH-
T ss_pred CCCCCEEEcccccceeccCC---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHH-HHH-
Confidence 99999999999999865432 2334799999999999998999999999999999999999999976432221 111
Q ss_pred hhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCC-----hHHHHH
Q 047800 476 VNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRIN-----PKEIVT 533 (547)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps-----~~eil~ 533 (547)
+..... ..+..++.++.+++.+||..||++||+ ++|+++
T Consensus 250 -----------i~~~~~--------~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 250 -----------IVSGKV--------RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp -----------HHHCCC--------CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred -----------HHcCCC--------CCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 111100 011223556899999999999999998 888765
No 128
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=2.2e-34 Score=287.94 Aligned_cols=209 Identities=18% Similarity=0.242 Sum_probs=153.8
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
.||||+++++++.+++..++||||+++|+|.+++.... .+++.++..++.|++.||+||| +++|+||||||+||++
T Consensus 69 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~ 144 (316)
T 2ac3_A 69 GHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRR-HFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILC 144 (316)
T ss_dssp CCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEE
T ss_pred CCCCeeeEEEEEeeCCEEEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEE
Confidence 39999999999999999999999999999999998754 6899999999999999999999 8999999999999999
Q ss_pred CCCCc---EEEcccCCcccCCCCC-------cccccccCCCCCCCCCCCCC-----CCCCcchhHHHHHHHHHHHHhCCC
Q 047800 396 DDNMV---AHLSDFGIAKTGEDQS-------MTQTQTLATIGYMAPEYGRE-----GRVSANGDVYSFGIMLMKTFIGKK 460 (547)
Q Consensus 396 ~~~~~---~kl~Dfg~a~~~~~~~-------~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDv~s~G~il~elltg~~ 460 (547)
+.++. +||+|||++....... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.
T Consensus 145 ~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~ 224 (316)
T 2ac3_A 145 EHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYP 224 (316)
T ss_dssp SCSSSSCSEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSC
T ss_pred ccCCCcCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCC
Confidence 88765 9999999987543211 11223469999999999875 458899999999999999999999
Q ss_pred CCchhhhhhhhhhhhhhhcc-C---chhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 461 PTDEIFNEEMTLKHWVNDWL-P---ISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 461 p~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
||......+.. |..... + ..+.+.+.......+ ......++.++.+++.+||..||++|||+.|+++.
T Consensus 225 pf~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 225 PFVGRCGSDCG---WDRGEACPACQNMLFESIQEGKYEFP---DKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp SCCCCCCSCSC---C----CCHHHHHHHHHHHHHCCCCCC---HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCccccccccc---ccccccchhHHHHHHHHHhccCcccC---chhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 99764322210 000000 0 000011111000000 00011235678999999999999999999999874
No 129
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2.1e-34 Score=302.73 Aligned_cols=193 Identities=23% Similarity=0.333 Sum_probs=159.6
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
.||||+++++++......++||||+++|+|.+++...+ .+++.++..++.|++.||+||| +++|+||||||+||++
T Consensus 74 ~HpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll 149 (476)
T 2y94_A 74 RHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNG-RLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLL 149 (476)
T ss_dssp CCTTBCCEEEEEECSSEEEEEEECCSSEEHHHHTTSSS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEE
T ss_pred CCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEE
Confidence 49999999999999999999999999999999998654 6999999999999999999999 9999999999999999
Q ss_pred CCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCC-CcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhh
Q 047800 396 DDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKH 474 (547)
Q Consensus 396 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~ 474 (547)
+.++.+||+|||+++...... ......||+.|+|||++.+..+ +.++||||+||++|||++|+.||........ ..
T Consensus 150 ~~~~~vkL~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~-~~- 226 (476)
T 2y94_A 150 DAHMNAKIADFGLSNMMSDGE-FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTL-FK- 226 (476)
T ss_dssp CTTCCEEECCCSSCEECCTTC-CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHH-HH-
T ss_pred ecCCCeEEEeccchhhccccc-cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHH-HH-
Confidence 999999999999998765432 2334579999999999988775 6899999999999999999999976432221 11
Q ss_pred hhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 475 WVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
.+.+... . .+..+++++.+++.+||..||++|||+.|+++.
T Consensus 227 -----------~i~~~~~-~-------~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 227 -----------KICDGIF-Y-------TPQYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp -----------HHHTTCC-C-------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred -----------HHhcCCc-C-------CCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 1111000 0 011224568999999999999999999999874
No 130
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=9.8e-35 Score=299.88 Aligned_cols=270 Identities=19% Similarity=0.200 Sum_probs=188.7
Q ss_pred cCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCccccc
Q 047800 246 ILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPVA 324 (547)
Q Consensus 246 ~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l~ 324 (547)
..+.|.++.++......+...++.|.......... ...+..|+. +..++ ||||++++
T Consensus 16 ~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~------------~~~~~~E~~~l~~l~----------hpnIv~~~ 73 (396)
T 4eut_A 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRP------------VDVQMREFEVLKKLN----------HKNIVKLF 73 (396)
T ss_dssp EEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSC------------HHHHHHHHHHHHHCC----------CTTBCCEE
T ss_pred EEEcCCCeEEEEEEECCCCcEEEEEEeccccccch------------HHHHHHHHHHHHhcC----------CCCCCeEE
Confidence 44557888888876665444455442211000000 011344554 55555 99999999
Q ss_pred cccCccc--eeEEEEeccCCCChhHHhhhCC--CCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe----C
Q 047800 325 TSCSNEE--FKALILEYKPHGSLEKYLYSGN--CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL----D 396 (547)
Q Consensus 325 ~~~~~~~--~~~lv~ey~~~gsL~~~l~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill----~ 396 (547)
+++.... ..++||||+++|+|.+++.... ..+++.+++.++.|++.||+||| +++|+||||||+||++ +
T Consensus 74 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~ 150 (396)
T 4eut_A 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGED 150 (396)
T ss_dssp EEEECTTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTT
T ss_pred EeeccCCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCC
Confidence 9987654 7899999999999999998643 23899999999999999999999 9999999999999999 7
Q ss_pred CCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCC--------CCCCcchhHHHHHHHHHHHHhCCCCCchhhhh
Q 047800 397 DNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGRE--------GRVSANGDVYSFGIMLMKTFIGKKPTDEIFNE 468 (547)
Q Consensus 397 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~sDv~s~G~il~elltg~~p~~~~~~~ 468 (547)
.++.+||+|||+++....... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......
T Consensus 151 ~~~~~kL~DFG~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~ 229 (396)
T 4eut_A 151 GQSVYKLTDFGAARELEDDEQ-FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP 229 (396)
T ss_dssp SCEEEEECCGGGCEECCCGGG-SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCT
T ss_pred CceeEEEecCCCceEccCCCc-cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcc
Confidence 888899999999986654322 234579999999998864 45788999999999999999999999754322
Q ss_pred hhh---hhhhhhhccCchhhhh---hhhhh--ccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHH
Q 047800 469 EMT---LKHWVNDWLPISIMEV---IDANL--LSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIE 540 (547)
Q Consensus 469 ~~~---~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~ 540 (547)
... .........+..+..+ ..... .................+.+++.+||+.||++|||++++++.++.+.+
T Consensus 230 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~ 309 (396)
T 4eut_A 230 RRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (396)
T ss_dssp TTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred cchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence 211 1111111111100000 00000 000011112235567789999999999999999999999999988765
Q ss_pred H
Q 047800 541 S 541 (547)
Q Consensus 541 ~ 541 (547)
.
T Consensus 310 ~ 310 (396)
T 4eut_A 310 R 310 (396)
T ss_dssp C
T ss_pred c
Confidence 4
No 131
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-34 Score=299.02 Aligned_cols=197 Identities=20% Similarity=0.273 Sum_probs=157.5
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
.||||+++++++.+.+..++||||+++|+|.+++.+.+..+++..++.++.|++.||+||| +++|+||||||+|||+
T Consensus 119 ~hp~Iv~l~~~~~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl 195 (412)
T 2vd5_A 119 DRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILL 195 (412)
T ss_dssp CTTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEE
T ss_pred CCCCeeeEEEEEeeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeee
Confidence 3999999999999999999999999999999999875557999999999999999999999 9999999999999999
Q ss_pred CCCCcEEEcccCCcccCCCCCc-ccccccCCCCCCCCCCCC-------CCCCCcchhHHHHHHHHHHHHhCCCCCchhhh
Q 047800 396 DDNMVAHLSDFGIAKTGEDQSM-TQTQTLATIGYMAPEYGR-------EGRVSANGDVYSFGIMLMKTFIGKKPTDEIFN 467 (547)
Q Consensus 396 ~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~-------~~~~~~~sDv~s~G~il~elltg~~p~~~~~~ 467 (547)
+.++.+||+|||+++....... .....+||+.|+|||++. +..++.++||||+||++|||++|+.||.....
T Consensus 196 d~~g~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~ 275 (412)
T 2vd5_A 196 DRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST 275 (412)
T ss_dssp CTTSCEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSH
T ss_pred cCCCCEEEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCH
Confidence 9999999999999986554332 223457999999999987 35689999999999999999999999976433
Q ss_pred hhhhhhhhhhhccCchhhhhhhhh-hccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCC---CChHHHHH
Q 047800 468 EEMTLKHWVNDWLPISIMEVIDAN-LLSREDIHFVAKEQFMSFVFNLAMECTVESPEQR---INPKEIVT 533 (547)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R---ps~~eil~ 533 (547)
.+.. .. +.... ....+ ..+..+++++.+++.+||. +|++| |+++|+++
T Consensus 276 ~~~~-~~------------i~~~~~~~~~p----~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 276 AETY-GK------------IVHYKEHLSLP----LVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp HHHH-HH------------HHTHHHHCCCC--------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred HHHH-HH------------HHhcccCcCCC----ccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 2211 11 11000 00000 0012345679999999999 99998 58888864
No 132
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.4e-35 Score=293.02 Aligned_cols=215 Identities=18% Similarity=0.221 Sum_probs=156.4
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
.||||+++++++..++..++||||++ |+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||++
T Consensus 58 ~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~ 133 (324)
T 3mtl_A 58 KHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLI 133 (324)
T ss_dssp CCTTBCCEEEEEECSSCEEEEEECCS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEE
T ss_pred CCCCCCeeeeEEeeCCEEEEEecccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEE
Confidence 49999999999999999999999997 5999999887767999999999999999999999 9999999999999999
Q ss_pred CCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhh-
Q 047800 396 DDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLK- 473 (547)
Q Consensus 396 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~- 473 (547)
+.++.+||+|||+++.............||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+....
T Consensus 134 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i 213 (324)
T 3mtl_A 134 NERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFI 213 (324)
T ss_dssp CTTCCEEECSSSEEECC------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred CCCCCEEEccCcccccccCCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 99999999999999765544333444578999999999876 4689999999999999999999999977543332111
Q ss_pred -hhhhhccCchhhhhhhhh------hcc-chhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 474 -HWVNDWLPISIMEVIDAN------LLS-REDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 474 -~~~~~~~~~~~~~~~~~~------~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
.......+.......... ... ...........+++++.+++.+||+.||++|||++|+++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 214 FRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp HHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred HHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 111110010111110000 000 0000001112235678999999999999999999999863
No 133
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.9e-34 Score=286.28 Aligned_cols=205 Identities=19% Similarity=0.228 Sum_probs=155.1
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
.||||+++++++..++..++||||+++++|.+++.... .+++.+++.++.|++.||+||| +.+|+|+||||+||++
T Consensus 92 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~ 167 (309)
T 2h34_A 92 QEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILV 167 (309)
T ss_dssp CCTTBCCEEEEEEETTEEEEEEECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEE
T ss_pred CCCCeeEEEEEEeeCCeEEEEEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEE
Confidence 49999999999999999999999999999999998754 6899999999999999999999 9999999999999999
Q ss_pred CCCCcEEEcccCCcccCCCCC-cccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhh
Q 047800 396 DDNMVAHLSDFGIAKTGEDQS-MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKH 474 (547)
Q Consensus 396 ~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~ 474 (547)
+.++.+||+|||++....... .......|++.|+|||++.+..++.++||||||+++|||++|+.||....... ...
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~ 245 (309)
T 2h34_A 168 SADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSV--MGA 245 (309)
T ss_dssp CTTSCEEECSCCC----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHH--HHH
T ss_pred cCCCCEEEecCccCccccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHH--HHH
Confidence 999999999999987654332 12234468999999999999899999999999999999999999997643221 111
Q ss_pred hhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCC-ChHHHHHHHHHHHHHH
Q 047800 475 WVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRI-NPKEIVTRLLKIIESL 542 (547)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp-s~~eil~~L~~i~~~~ 542 (547)
..... .... ...+..++.++.+++.+||+.||++|| |++++++.|+++.+..
T Consensus 246 ~~~~~------------~~~~----~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 246 HINQA------------IPRP----STVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp HHHSC------------CCCG----GGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred HhccC------------CCCc----cccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 11100 0000 001122345689999999999999999 9999999998775543
No 134
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=5.7e-34 Score=298.83 Aligned_cols=198 Identities=21% Similarity=0.286 Sum_probs=161.4
Q ss_pred CCCCCCCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCC-CCccccCCC
Q 047800 311 GKRPSNDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYS-APVIHCDIK 389 (547)
Q Consensus 311 ~~~~~~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~-~~i~H~dlk 389 (547)
..+...||||+++++++...+..++||||+++|+|.+++.... .+++..+..++.|++.||+||| + ++|+|||||
T Consensus 201 ~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlk 276 (446)
T 4ejn_A 201 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLK 276 (446)
T ss_dssp CCCCCSCTTSCCEEEEEEETTEEEEEECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCC
T ss_pred HHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCC
Confidence 3344569999999999999999999999999999999997754 6899999999999999999999 7 899999999
Q ss_pred CCcEEeCCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhh
Q 047800 390 ANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEE 469 (547)
Q Consensus 390 p~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~ 469 (547)
|+|||++.++.+||+|||+++.............||+.|+|||++.+..++.++||||+||++|||++|+.||.......
T Consensus 277 p~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~ 356 (446)
T 4ejn_A 277 LENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK 356 (446)
T ss_dssp GGGEEECSSSCEEECCCCCCCTTCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred HHHEEECCCCCEEEccCCCceeccCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH
Confidence 99999999999999999999865444334455689999999999999999999999999999999999999997643322
Q ss_pred hhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCC-----ChHHHHH
Q 047800 470 MTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRI-----NPKEIVT 533 (547)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp-----s~~eil~ 533 (547)
.. .. +..... ..+..+++++.+++.+||+.||++|| +++|+++
T Consensus 357 ~~-~~------------i~~~~~--------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 357 LF-EL------------ILMEEI--------RFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp HH-HH------------HHHCCC--------CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred HH-HH------------HHhCCC--------CCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 11 10 000000 00112345689999999999999999 9999876
No 135
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=7.6e-34 Score=292.62 Aligned_cols=215 Identities=15% Similarity=0.231 Sum_probs=157.6
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGN-CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
|||||++++++.+++..++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +++|+||||||+||++
T Consensus 85 h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll 161 (389)
T 3gni_B 85 HPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILI 161 (389)
T ss_dssp CTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEE
T ss_pred CCCCCcEeEEEEECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEE
Confidence 9999999999999999999999999999999998752 46999999999999999999999 9999999999999999
Q ss_pred CCCCcEEEcccCCcccCCCCC-------cccccccCCCCCCCCCCCCC--CCCCcchhHHHHHHHHHHHHhCCCCCchhh
Q 047800 396 DDNMVAHLSDFGIAKTGEDQS-------MTQTQTLATIGYMAPEYGRE--GRVSANGDVYSFGIMLMKTFIGKKPTDEIF 466 (547)
Q Consensus 396 ~~~~~~kl~Dfg~a~~~~~~~-------~~~~~~~gt~~y~aPE~~~~--~~~~~~sDv~s~G~il~elltg~~p~~~~~ 466 (547)
+.++.+||+|||.+....... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....
T Consensus 162 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 241 (389)
T 3gni_B 162 SVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMP 241 (389)
T ss_dssp CTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred cCCCCEEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC
Confidence 999999999999886432111 11222378999999999987 578999999999999999999999997644
Q ss_pred hhhhhhhhhhhhccCc---------hh-------------hhhhh---hhhccchhhhhhcHHHHHHHHHHHHhhhcCcC
Q 047800 467 NEEMTLKHWVNDWLPI---------SI-------------MEVID---ANLLSREDIHFVAKEQFMSFVFNLAMECTVES 521 (547)
Q Consensus 467 ~~~~~~~~~~~~~~~~---------~~-------------~~~~~---~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 521 (547)
........+....... .. .+... +............+..+++++.+++.+||+.|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~d 321 (389)
T 3gni_B 242 ATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRN 321 (389)
T ss_dssp STTHHHHC--------------------------------------------------------CCHHHHHHHHHHTCSC
T ss_pred HHHHHHHHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcC
Confidence 3332221111100000 00 00000 00000000011122345667999999999999
Q ss_pred CCCCCChHHHHHH
Q 047800 522 PEQRINPKEIVTR 534 (547)
Q Consensus 522 p~~Rps~~eil~~ 534 (547)
|++|||+.|+++.
T Consensus 322 P~~Rpta~ell~h 334 (389)
T 3gni_B 322 PDARPSASTLLNH 334 (389)
T ss_dssp TTTSCCHHHHTTS
T ss_pred cccCCCHHHHhcC
Confidence 9999999999854
No 136
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=5.1e-34 Score=279.70 Aligned_cols=196 Identities=21% Similarity=0.224 Sum_probs=158.1
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
.||||+++++++.+....++||||+++++|.+++.... .+++.++..++.|++.||+||| +++++|+||||+||++
T Consensus 64 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~ 139 (277)
T 3f3z_A 64 DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKR-VFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLF 139 (277)
T ss_dssp CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEE
T ss_pred CCCCEeeEEEEEecCCeEEEEEeccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEE
Confidence 39999999999999999999999999999999987754 6899999999999999999999 9999999999999999
Q ss_pred ---CCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhh
Q 047800 396 ---DDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTL 472 (547)
Q Consensus 396 ---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~ 472 (547)
+.++.+||+|||++....... ......||+.|+|||++.+. ++.++||||+|+++|||++|+.||......+...
T Consensus 140 ~~~~~~~~~~l~Dfg~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~ 217 (277)
T 3f3z_A 140 LTDSPDSPLKLIDFGLAARFKPGK-MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVML 217 (277)
T ss_dssp SSSSTTCCEEECCCTTCEECCTTS-CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred ecCCCCCcEEEEecccceeccCcc-chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence 788999999999997655432 23344799999999998654 8999999999999999999999997643332211
Q ss_pred hhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 473 KHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
. ..... . ..+. .....+++++.+++.+||+.||++|||+.++++.
T Consensus 218 ~-~~~~~------------~-~~~~---~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 218 K-IREGT------------F-TFPE---KDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp H-HHHCC------------C-CCCH---HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred H-HHhCC------------C-CCCc---hhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1 11000 0 0000 0001235568999999999999999999999864
No 137
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.5e-34 Score=288.91 Aligned_cols=187 Identities=24% Similarity=0.289 Sum_probs=157.2
Q ss_pred CCCCccccccccCccceeEEEEeccCCC-ChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEE
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHG-SLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~g-sL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nil 394 (547)
.||||+++++++.+.+..++||||+.+| +|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||+
T Consensus 87 ~h~~Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIl 162 (335)
T 3dls_A 87 EHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIV 162 (335)
T ss_dssp CCTTBCCEEEEEECSSEEEEEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEE
T ss_pred CCCCEeeEEEEEeeCCEEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEE
Confidence 3999999999999999999999999777 9999998764 6999999999999999999999 999999999999999
Q ss_pred eCCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCC-CcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhh
Q 047800 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLK 473 (547)
Q Consensus 395 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~ 473 (547)
++.++.+||+|||+++....... .....||+.|+|||++.+..+ +.++||||+||++|||++|+.||.......
T Consensus 163 l~~~~~~kL~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---- 237 (335)
T 3dls_A 163 IAEDFTIKLIDFGSAAYLERGKL-FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETV---- 237 (335)
T ss_dssp ECTTSCEEECCCTTCEECCTTCC-BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGT----
T ss_pred EcCCCcEEEeecccceECCCCCc-eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHH----
Confidence 99999999999999986654332 233579999999999988876 789999999999999999999997521110
Q ss_pred hhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 474 HWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
..... .+..+++++.+++.+||+.||++|||+.++++.
T Consensus 238 ---------------~~~~~--------~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 238 ---------------EAAIH--------PPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ---------------TTCCC--------CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ---------------hhccC--------CCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000 001124568999999999999999999999875
No 138
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=4.8e-34 Score=282.11 Aligned_cols=203 Identities=24% Similarity=0.346 Sum_probs=164.1
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~ 396 (547)
||||+++++++ ..+..++||||+++|+|.+++.... .+++.+++.++.|++.||+||| +.+++|+||||+||+++
T Consensus 77 h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~ 151 (291)
T 1xbb_A 77 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLV 151 (291)
T ss_dssp CTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEE
T ss_pred CCCEEEEEEEE-CCCCcEEEEEeCCCCCHHHHHHhCc-CCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEe
Confidence 99999999999 5567899999999999999998754 6999999999999999999999 99999999999999999
Q ss_pred CCCcEEEcccCCcccCCCCCcc---cccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCchhhhhhhhh
Q 047800 397 DNMVAHLSDFGIAKTGEDQSMT---QTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFI-GKKPTDEIFNEEMTL 472 (547)
Q Consensus 397 ~~~~~kl~Dfg~a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ellt-g~~p~~~~~~~~~~~ 472 (547)
.++.+||+|||+++........ .....+++.|+|||++.+..++.++||||+|+++|||++ |+.||.........
T Consensus 152 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~- 230 (291)
T 1xbb_A 152 TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT- 230 (291)
T ss_dssp ETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH-
T ss_pred CCCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHH-
Confidence 9999999999999765433221 122346788999999988889999999999999999999 99999764332211
Q ss_pred hhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHHHHh
Q 047800 473 KHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESLLK 544 (547)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~~~~ 544 (547)
... ..... ...+..++.++.+++.+||+.||++|||+.++++.|+.+..+...
T Consensus 231 -~~~------------~~~~~------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~ 283 (291)
T 1xbb_A 231 -AML------------EKGER------MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 283 (291)
T ss_dssp -HHH------------HTTCC------CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHH
T ss_pred -HHH------------HcCCC------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhh
Confidence 111 00000 001122355689999999999999999999999999999887654
No 139
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=5.1e-34 Score=284.98 Aligned_cols=197 Identities=25% Similarity=0.324 Sum_probs=161.4
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~ 396 (547)
||||+++++++...+..++||||+++|+|.+++......+++.++..++.|++.||.||| +.+++|+||||+||+++
T Consensus 83 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~ 159 (314)
T 3com_A 83 SPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLN 159 (314)
T ss_dssp CTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEC
T ss_pred CCCCccEEEEEEeCCEEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEEC
Confidence 999999999999999999999999999999999855557999999999999999999999 99999999999999999
Q ss_pred CCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhh
Q 047800 397 DNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWV 476 (547)
Q Consensus 397 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~ 476 (547)
.++.+||+|||.+..............|++.|+|||++.+..++.++||||+|+++|||++|+.||........... ..
T Consensus 160 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-~~ 238 (314)
T 3com_A 160 TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFM-IP 238 (314)
T ss_dssp TTCCEEECCCTTCEECBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH-HH
T ss_pred CCCCEEEeecccchhhhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHH-Hh
Confidence 99999999999997665443334445789999999999998999999999999999999999999976432221100 00
Q ss_pred hhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 477 NDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
.. ... ....+..++..+.+++.+||..||++|||+.++++.
T Consensus 239 ~~-------------~~~----~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 239 TN-------------PPP----TFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp HS-------------CCC----CCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cC-------------CCc----ccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 00 000 000112234568999999999999999999999863
No 140
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=4.4e-34 Score=285.53 Aligned_cols=206 Identities=23% Similarity=0.365 Sum_probs=165.0
Q ss_pred CCCccccccccCcc-ceeEEEEeccCCCChhHHhhhCCCC---------------CCHHHHHHHHHHHHHHHHHHHccCC
Q 047800 317 DANISPVATSCSNE-EFKALILEYKPHGSLEKYLYSGNCS---------------LDIFQRLNSMIDVALALEYMHFGYS 380 (547)
Q Consensus 317 H~nIv~l~~~~~~~-~~~~lv~ey~~~gsL~~~l~~~~~~---------------l~~~~~~~i~~~i~~~l~~lH~~~~ 380 (547)
||||+++++++... ...++||||+++|+|.+++...... +++..++.++.|++.||+||| +
T Consensus 90 hp~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~ 166 (316)
T 2xir_A 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---S 166 (316)
T ss_dssp CTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---H
T ss_pred CCCeeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---h
Confidence 99999999998765 4589999999999999999875422 889999999999999999999 8
Q ss_pred CCccccCCCCCcEEeCCCCcEEEcccCCcccCCCCCc--ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHh-
Q 047800 381 APVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSM--TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFI- 457 (547)
Q Consensus 381 ~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ellt- 457 (547)
++|+||||||+||+++.++.+||+|||+++....... ......+|+.|+|||++.+..++.++||||+|+++|||++
T Consensus 167 ~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~ 246 (316)
T 2xir_A 167 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 246 (316)
T ss_dssp TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred CCcccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999976543221 2233467889999999998889999999999999999998
Q ss_pred CCCCCchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHH
Q 047800 458 GKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLK 537 (547)
Q Consensus 458 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~ 537 (547)
|+.||................ .. ...+..+++++.+++.+||+.||++|||+.|+++.|+.
T Consensus 247 g~~p~~~~~~~~~~~~~~~~~-------------~~------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~ 307 (316)
T 2xir_A 247 GASPYPGVKIDEEFCRRLKEG-------------TR------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 307 (316)
T ss_dssp SCCSSTTCCCSHHHHHHHHHT-------------CC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCCCcccchhHHHHHHhccC-------------cc------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 999997643222211111100 00 00011224568999999999999999999999999999
Q ss_pred HHHHHHh
Q 047800 538 IIESLLK 544 (547)
Q Consensus 538 i~~~~~~ 544 (547)
+.++..+
T Consensus 308 ~~~~~~~ 314 (316)
T 2xir_A 308 LLQANAQ 314 (316)
T ss_dssp HHHHHC-
T ss_pred HHhhhcc
Confidence 9876543
No 141
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=7.2e-34 Score=285.71 Aligned_cols=192 Identities=20% Similarity=0.249 Sum_probs=154.0
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~ 396 (547)
||||+++++++...+..++||||+++|+|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||+++
T Consensus 80 hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~ 155 (327)
T 3a62_A 80 HPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLN 155 (327)
T ss_dssp CTTBCCEEEEEECSSCEEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEEC
T ss_pred CCCccceeEEEEcCCEEEEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEEC
Confidence 9999999999999999999999999999999998654 6899999999999999999999 99999999999999999
Q ss_pred CCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhh
Q 047800 397 DNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWV 476 (547)
Q Consensus 397 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~ 476 (547)
.++.+||+|||+++.............||+.|+|||++.+..++.++||||+|+++|||++|+.||........ ...
T Consensus 156 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~-- 232 (327)
T 3a62_A 156 HQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKT-IDK-- 232 (327)
T ss_dssp TTSCEEECCCSCC----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHH--
T ss_pred CCCcEEEEeCCcccccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHH-HHH--
Confidence 99999999999997544333333445799999999999988999999999999999999999999976433221 111
Q ss_pred hhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCC-----ChHHHHH
Q 047800 477 NDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRI-----NPKEIVT 533 (547)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp-----s~~eil~ 533 (547)
+..... ..+..++.++.+++.+||..||++|| ++.|+++
T Consensus 233 ----------i~~~~~--------~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 233 ----------ILKCKL--------NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp ----------HHHTCC--------CCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred ----------HHhCCC--------CCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 111100 00112345689999999999999999 6777765
No 142
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=2.7e-33 Score=279.08 Aligned_cols=212 Identities=19% Similarity=0.218 Sum_probs=158.8
Q ss_pred CCCccccccccCccc-----eeEEEEeccCCCChhHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCC
Q 047800 317 DANISPVATSCSNEE-----FKALILEYKPHGSLEKYLYSGN-CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKA 390 (547)
Q Consensus 317 H~nIv~l~~~~~~~~-----~~~lv~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp 390 (547)
||||+++++++.... ..++||||++ |+|.+++.... ..+++.++..++.|++.||+||| +++|+||||||
T Consensus 73 h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp 148 (308)
T 3g33_A 73 HPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKP 148 (308)
T ss_dssp CTTBCCEEEEEEECCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCT
T ss_pred CCCeEEeeeeeeccCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCH
Confidence 999999999987654 5899999996 59999998754 34999999999999999999999 99999999999
Q ss_pred CcEEeCCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhh
Q 047800 391 NNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEM 470 (547)
Q Consensus 391 ~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~ 470 (547)
+||+++.++.+||+|||+++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||......+.
T Consensus 149 ~Nil~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~ 227 (308)
T 3g33_A 149 ENILVTSGGTVKLADFGLARIYSYQM-ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ 227 (308)
T ss_dssp TTEEECTTSCEEECSCSCTTTSTTCC-CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHH
T ss_pred HHEEEcCCCCEEEeeCccccccCCCc-ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 99999999999999999998654332 23445789999999999999999999999999999999999999976543332
Q ss_pred hhhhhhhhc-cC--chhhhh---hhhhhccc-hhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 471 TLKHWVNDW-LP--ISIMEV---IDANLLSR-EDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 471 ~~~~~~~~~-~~--~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
. ....... .+ ...... ........ ..........+++++.+++.+||+.||++|||+.|+++.
T Consensus 228 ~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 228 L-GKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp H-HHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred H-HHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 1 1111100 00 000000 00000000 000000012235678999999999999999999999864
No 143
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=6.4e-34 Score=293.89 Aligned_cols=203 Identities=19% Similarity=0.222 Sum_probs=153.3
Q ss_pred CCCCccccccccCc----cceeEEEEeccCCCChhHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCC
Q 047800 316 NDANISPVATSCSN----EEFKALILEYKPHGSLEKYLYSGN-CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKA 390 (547)
Q Consensus 316 ~H~nIv~l~~~~~~----~~~~~lv~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp 390 (547)
.||||+++++++.. ....++||||+++|+|.+++.... ..+++.++..++.|++.||+||| +.+|+||||||
T Consensus 113 ~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp 189 (400)
T 1nxk_A 113 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKP 189 (400)
T ss_dssp TSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCG
T ss_pred CCCCcceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCc
Confidence 39999999998865 577899999999999999998753 46999999999999999999999 89999999999
Q ss_pred CcEEeCC---CCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhh
Q 047800 391 NNVLLDD---NMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFN 467 (547)
Q Consensus 391 ~Nill~~---~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~ 467 (547)
+||+++. ++.+||+|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 190 ~Nill~~~~~~~~~kl~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 268 (400)
T 1nxk_A 190 ENLLYTSKRPNAILKLTDFGFAKETTSHN-SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG 268 (400)
T ss_dssp GGEEESSSSTTCCEEECCCTTCEECC------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTT
T ss_pred ceEEEecCCCCccEEEEecccccccCCCC-ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCcc
Confidence 9999987 7899999999998654322 22345789999999999999999999999999999999999999976432
Q ss_pred hhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHH
Q 047800 468 EEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRL 535 (547)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L 535 (547)
..... .....+... ..... ......++.++.+++.+||..||++|||+.|+++.-
T Consensus 269 ~~~~~---------~~~~~i~~~-~~~~~---~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp 323 (400)
T 1nxk_A 269 LAISP---------GMKTRIRMG-QYEFP---NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 323 (400)
T ss_dssp CSSCC---------SHHHHHHHT-CCCCC---TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred ccccH---------HHHHHHHcC-cccCC---CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 21100 000000000 00000 000122356789999999999999999999998753
No 144
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.5e-34 Score=280.59 Aligned_cols=191 Identities=19% Similarity=0.298 Sum_probs=145.6
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~ 396 (547)
||||+++++++.+.+..++||||+ ++++.+++.... .+++.++..++.|++.||+||| +.+++||||||+||+++
T Consensus 72 h~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dikp~Nil~~ 146 (275)
T 2eue_A 72 HPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLD 146 (275)
T ss_dssp CTTBCCEEEEEECSSCEEEEEECC-CEEHHHHHHTSS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEC
T ss_pred CCCeEEEEEEEecCCeEEEEehhc-CCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCeeccCChHhEEEC
Confidence 999999999999999999999999 678988887654 6999999999999999999999 99999999999999999
Q ss_pred CCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCC-CcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhh
Q 047800 397 DNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHW 475 (547)
Q Consensus 397 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~ 475 (547)
.++.+||+|||+++....... .....||+.|+|||++.+..+ +.++||||+|+++|||++|+.||.......... ..
T Consensus 147 ~~~~~kl~Dfg~~~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-~~ 224 (275)
T 2eue_A 147 EHLNVKIADFGLSNIMTDGNF-LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFK-NI 224 (275)
T ss_dssp TTSCEEECCSSCC----------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-HH
T ss_pred CCCCEEEeecccceeccCccc-ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHH-HH
Confidence 999999999999976543322 233468999999999988765 789999999999999999999997643222110 00
Q ss_pred hhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 476 VNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
... .. ..+..+++++.+++.+||+.||++|||++|+++.
T Consensus 225 ------------~~~-~~-------~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 225 ------------SNG-VY-------TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp ------------HHT-CC-------CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred ------------HhC-CC-------CCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 000 00 0011234568999999999999999999999864
No 145
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=4.4e-34 Score=281.13 Aligned_cols=196 Identities=19% Similarity=0.261 Sum_probs=158.3
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~ 396 (547)
||||+++++++..++..++||||+++|+|.+.+.... .+++..+..++.|++.||+||| +.+|+||||||+||+++
T Consensus 64 h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~ 139 (284)
T 3kk8_A 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLA 139 (284)
T ss_dssp CTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEES
T ss_pred CCCcCeEEEEEEcCCEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEe
Confidence 9999999999999999999999999999999887654 6899999999999999999999 99999999999999997
Q ss_pred CCCc---EEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhh
Q 047800 397 DNMV---AHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLK 473 (547)
Q Consensus 397 ~~~~---~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~ 473 (547)
.++. +||+|||.+........ .....||+.|+|||++.+..++.++||||+|+++|+|++|+.||..........
T Consensus 140 ~~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~- 217 (284)
T 3kk8_A 140 SKAKGAAVKLADFGLAIEVNDSEA-WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYA- 217 (284)
T ss_dssp SSSTTCCEEECCCTTCEECCSSCB-CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-
T ss_pred cCCCCCcEEEeeceeeEEcccCcc-ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHH-
Confidence 6654 99999999976554322 234579999999999999999999999999999999999999997643322111
Q ss_pred hhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 474 HWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
...... ...+ ......+++++.+++.+||+.||++|||+.|+++.
T Consensus 218 ~~~~~~-------------~~~~---~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 218 QIKAGA-------------YDYP---SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp HHHHTC-------------CCCC---TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred HHHhcc-------------ccCC---chhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 110000 0000 00011234568999999999999999999999874
No 146
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.3e-34 Score=280.39 Aligned_cols=195 Identities=21% Similarity=0.308 Sum_probs=139.5
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
.||||+++++++.+.+..++||||+++++|.+++......+++.++..++.|++.||+||| +++++|+||||+||++
T Consensus 69 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili 145 (278)
T 3cok_A 69 KHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLL 145 (278)
T ss_dssp CCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEE
T ss_pred CCCCeEeEEEEEccCCeEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEE
Confidence 4999999999999999999999999999999999887667999999999999999999999 9999999999999999
Q ss_pred CCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhh
Q 047800 396 DDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHW 475 (547)
Q Consensus 396 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~ 475 (547)
+.++.+||+|||.+..............||+.|+|||++.+..++.++||||+|+++|||++|+.||......... ..
T Consensus 146 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~- 223 (278)
T 3cok_A 146 TRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL-NK- 223 (278)
T ss_dssp CTTCCEEECCCTTCEECC----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------
T ss_pred cCCCCEEEEeecceeeccCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH-HH-
Confidence 9999999999999986543332333457899999999999888999999999999999999999999753322110 00
Q ss_pred hhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 476 VNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
+... .. ..+..++.++.+++.+||+.||++|||++++++.
T Consensus 224 -----------~~~~----~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 224 -----------VVLA----DY----EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp -----------CCSS----CC----CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred -----------Hhhc----cc----CCccccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 0000 00 0011224568899999999999999999999863
No 147
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=4.3e-34 Score=284.07 Aligned_cols=194 Identities=25% Similarity=0.357 Sum_probs=160.8
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~ 396 (547)
||||+++++++......++||||+++++|.+++..+ .+++.++..++.|++.||.||| +.+++|+||||+||+++
T Consensus 79 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~ 153 (303)
T 3a7i_A 79 SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLS 153 (303)
T ss_dssp CTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEC
T ss_pred CCCEeEEEEEEecCCeEEEEEEeCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEEC
Confidence 999999999999999999999999999999999764 5899999999999999999999 89999999999999999
Q ss_pred CCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhh
Q 047800 397 DNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWV 476 (547)
Q Consensus 397 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~ 476 (547)
.++.+||+|||.+..............||+.|+|||++.+..++.++||||||+++|||++|+.||......... ...
T Consensus 154 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~--~~~ 231 (303)
T 3a7i_A 154 EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVL--FLI 231 (303)
T ss_dssp TTSCEEECCCTTCEECBTTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH--HHH
T ss_pred CCCCEEEeecccceecCccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHH--HHh
Confidence 999999999999986654433344557999999999999989999999999999999999999999764322211 000
Q ss_pred hhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHH
Q 047800 477 NDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRL 535 (547)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L 535 (547)
.. ... . ..+..++..+.+++.+||..||++|||+.++++..
T Consensus 232 ~~------------~~~--~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 232 PK------------NNP--P----TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp HH------------SCC--C----CCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred hc------------CCC--C----CCccccCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 00 000 0 00112245689999999999999999999998754
No 148
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=2.5e-34 Score=289.03 Aligned_cols=202 Identities=25% Similarity=0.358 Sum_probs=161.5
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCC------CCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGN------CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKA 390 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~------~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp 390 (547)
||||+++++++.+....++||||+++|+|.+++.... ..+++.+++.++.|++.||.||| +++|+||||||
T Consensus 92 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp 168 (327)
T 2yfx_A 92 HQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAA 168 (327)
T ss_dssp CTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCG
T ss_pred CCCCCeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCH
Confidence 9999999999999999999999999999999998753 35899999999999999999999 99999999999
Q ss_pred CcEEeCC---CCcEEEcccCCcccCCCCC--cccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCch
Q 047800 391 NNVLLDD---NMVAHLSDFGIAKTGEDQS--MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFI-GKKPTDE 464 (547)
Q Consensus 391 ~Nill~~---~~~~kl~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ellt-g~~p~~~ 464 (547)
+||+++. +..+||+|||+++...... .......+++.|+|||++.+..++.++||||||+++|||++ |+.||..
T Consensus 169 ~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~ 248 (327)
T 2yfx_A 169 RNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 248 (327)
T ss_dssp GGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred hHEEEecCCCcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCC
Confidence 9999984 4569999999987432221 12233467899999999988889999999999999999998 9999976
Q ss_pred hhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHH
Q 047800 465 IFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIES 541 (547)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~ 541 (547)
....... ..... ... ...+..++..+.+++.+||+.||++|||+.++++.|+.+...
T Consensus 249 ~~~~~~~--~~~~~------------~~~------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 249 KSNQEVL--EFVTS------------GGR------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305 (327)
T ss_dssp CCHHHHH--HHHHT------------TCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cCHHHHH--HHHhc------------CCC------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence 4322211 11000 000 001112345689999999999999999999999999988664
No 149
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=6.3e-34 Score=290.06 Aligned_cols=213 Identities=23% Similarity=0.251 Sum_probs=159.5
Q ss_pred CCCCCCCccccccccCccceeEEEEeccCCCChhHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCC
Q 047800 313 RPSNDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGN-CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKAN 391 (547)
Q Consensus 313 ~~~~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~ 391 (547)
....||||+++++++...+..++||||+ +++|.+++.... ..+++.++..++.|++.||+||| +++|+||||||+
T Consensus 91 ~~~~h~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~ 166 (360)
T 3llt_A 91 DDINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPE 166 (360)
T ss_dssp CSTTGGGBCCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGG
T ss_pred cCCCCCCeecccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcc
Confidence 3456999999999999999999999999 889999998754 45899999999999999999999 999999999999
Q ss_pred cEEeCC-------------------------CCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHH
Q 047800 392 NVLLDD-------------------------NMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVY 446 (547)
Q Consensus 392 Nill~~-------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~ 446 (547)
||+++. ++.+||+|||+++..... .....||+.|+|||++.+..++.++|||
T Consensus 167 NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Diw 243 (360)
T 3llt_A 167 NILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY---HGSIINTRQYRAPEVILNLGWDVSSDMW 243 (360)
T ss_dssp GEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC---CCSCCSCGGGCCHHHHTTCCCCTTHHHH
T ss_pred cEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCC---CcCccCcccccCcHHHcCCCCCCccchH
Confidence 999975 789999999999864432 2345789999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCchhhhhhhhhhhhhh--hccCc-hhhhhhhhhh---ccchh------h--------------hh
Q 047800 447 SFGIMLMKTFIGKKPTDEIFNEEMTLKHWVN--DWLPI-SIMEVIDANL---LSRED------I--------------HF 500 (547)
Q Consensus 447 s~G~il~elltg~~p~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~---~~~~~------~--------------~~ 500 (547)
|+||++|||++|+.||......+. ...... ...+. ...+...... ..... . ..
T Consensus 244 slG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 322 (360)
T 3llt_A 244 SFGCVLAELYTGSLLFRTHEHMEH-LAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLP 322 (360)
T ss_dssp HHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHCCCCCCCCcHHHH-HHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhccc
Confidence 999999999999999976433221 111100 00011 0000000000 00000 0 00
Q ss_pred hcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHH
Q 047800 501 VAKEQFMSFVFNLAMECTVESPEQRINPKEIVT 533 (547)
Q Consensus 501 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~ 533 (547)
.......+.+.+++.+||+.||++|||+.|+++
T Consensus 323 ~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~ 355 (360)
T 3llt_A 323 LYKIIKHELFCDFLYSILQIDPTLRPSPAELLK 355 (360)
T ss_dssp HHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred ccccchHHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 000111256889999999999999999999975
No 150
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=2e-34 Score=292.05 Aligned_cols=191 Identities=24% Similarity=0.306 Sum_probs=155.4
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~ 396 (547)
||||+++++++..++..++||||++ |++.+++......+++.++..++.|++.||+||| +++|+||||||+||+++
T Consensus 113 hpniv~~~~~~~~~~~~~lv~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~ 188 (348)
T 1u5q_A 113 HPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLS 188 (348)
T ss_dssp CTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEE
T ss_pred CCCEeeEEEEEEECCeEEEEEecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEC
Confidence 9999999999999999999999997 6898888765557999999999999999999999 89999999999999999
Q ss_pred CCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCC---CCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhh
Q 047800 397 DNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGR---EGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLK 473 (547)
Q Consensus 397 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~ 473 (547)
.++.+||+|||+++..... ....||+.|+|||++. +..++.++|||||||++|||++|+.||......... .
T Consensus 189 ~~~~~kL~DfG~a~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~-~ 263 (348)
T 1u5q_A 189 EPGLVKLGDFGSASIMAPA----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL-Y 263 (348)
T ss_dssp TTTEEEECCCTTCBSSSSB----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-H
T ss_pred CCCCEEEeeccCceecCCC----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH-H
Confidence 9999999999999765432 2347999999999884 567899999999999999999999999764322211 1
Q ss_pred hhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 474 HWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
.......+ . .....+++.+.+++.+||+.||++|||++++++.
T Consensus 264 ~~~~~~~~------------~------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 264 HIAQNESP------------A------LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp HHHHSCCC------------C------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred HHHhcCCC------------C------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 11110000 0 0011224568899999999999999999999864
No 151
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.6e-34 Score=293.49 Aligned_cols=212 Identities=18% Similarity=0.263 Sum_probs=154.2
Q ss_pred CCCCccccccccCcc--ceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcE
Q 047800 316 NDANISPVATSCSNE--EFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~--~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Ni 393 (547)
.||||+++++++... ...++||||++ |+|.+++..+ .+++..+..++.|++.||+||| +.+|+||||||+||
T Consensus 67 ~h~niv~l~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NI 140 (388)
T 3oz6_A 67 GHENIVNLLNVLRADNDRDVYLVFDYME-TDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNI 140 (388)
T ss_dssp TCTTBCCEEEEEECTTSSCEEEEEECCS-EEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGE
T ss_pred CCCCCCeeeeEEecCCCCEEEEEecccC-cCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHe
Confidence 499999999998654 47899999997 5999999875 5899999999999999999999 99999999999999
Q ss_pred EeCCCCcEEEcccCCcccCCCC---------------------CcccccccCCCCCCCCCCCCC-CCCCcchhHHHHHHH
Q 047800 394 LLDDNMVAHLSDFGIAKTGEDQ---------------------SMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIM 451 (547)
Q Consensus 394 ll~~~~~~kl~Dfg~a~~~~~~---------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~s~G~i 451 (547)
+++.++.+||+|||+|+..... .......+||++|+|||++.+ ..++.++||||+||+
T Consensus 141 ll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~i 220 (388)
T 3oz6_A 141 LLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCI 220 (388)
T ss_dssp EECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHH
T ss_pred EEcCCCCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHH
Confidence 9999999999999999754321 111233479999999999987 568999999999999
Q ss_pred HHHHHhCCCCCchhhhhhhhhhhhhhhcc-Cc--hh--------hhhhhhhhcc----chh----h--------hhhcHH
Q 047800 452 LMKTFIGKKPTDEIFNEEMTLKHWVNDWL-PI--SI--------MEVIDANLLS----RED----I--------HFVAKE 504 (547)
Q Consensus 452 l~elltg~~p~~~~~~~~~~~~~~~~~~~-~~--~~--------~~~~~~~~~~----~~~----~--------~~~~~~ 504 (547)
+|||++|++||........ +........ +. .+ ...+...... ... . ......
T Consensus 221 l~ell~g~~pf~~~~~~~~-~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (388)
T 3oz6_A 221 LGEILCGKPIFPGSSTMNQ-LERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKA 299 (388)
T ss_dssp HHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTC
T ss_pred HHHHHhCCCCCCCCCHHHH-HHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccc
Confidence 9999999999976433221 111111100 00 00 0000000000 000 0 000001
Q ss_pred HHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 505 QFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 505 ~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
.+++++.+++.+||..||++|||++|+++.
T Consensus 300 ~~~~~~~dll~~~L~~dP~~R~t~~e~l~H 329 (388)
T 3oz6_A 300 DCNEEALDLLDKLLQFNPNKRISANDALKH 329 (388)
T ss_dssp CCCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred cCCHHHHHHHHHhhccCcccCCCHHHHhCC
Confidence 235678999999999999999999999764
No 152
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=5.5e-34 Score=285.31 Aligned_cols=205 Identities=18% Similarity=0.221 Sum_probs=158.1
Q ss_pred CCCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEE
Q 047800 315 SNDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394 (547)
Q Consensus 315 ~~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nil 394 (547)
..||||+++++++...+..++||||+++++|.+++......+++.+++.++.|++.||+||| +++++||||||+||+
T Consensus 86 l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl 162 (319)
T 2y4i_B 86 TRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVF 162 (319)
T ss_dssp CCCTTBCCCCEEEECSSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEE
T ss_pred CCCCCEeEEEEEEecCCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEE
Confidence 35999999999999999999999999999999999887667999999999999999999999 999999999999999
Q ss_pred eCCCCcEEEcccCCcccCCCC-----CcccccccCCCCCCCCCCCCC---------CCCCcchhHHHHHHHHHHHHhCCC
Q 047800 395 LDDNMVAHLSDFGIAKTGEDQ-----SMTQTQTLATIGYMAPEYGRE---------GRVSANGDVYSFGIMLMKTFIGKK 460 (547)
Q Consensus 395 l~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~gt~~y~aPE~~~~---------~~~~~~sDv~s~G~il~elltg~~ 460 (547)
++ ++.+||+|||+++..... ........|++.|+|||++.+ ..++.++||||||+++|||++|+.
T Consensus 163 ~~-~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~ 241 (319)
T 2y4i_B 163 YD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREW 241 (319)
T ss_dssp EC---CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred Ee-CCCEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCC
Confidence 98 679999999998654211 112223468999999999874 347899999999999999999999
Q ss_pred CCchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHH
Q 047800 461 PTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIE 540 (547)
Q Consensus 461 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~ 540 (547)
||........... ..... .+.. . ...++.++.+++.+||..||++|||+.++++.|+.+.+
T Consensus 242 p~~~~~~~~~~~~-~~~~~---------~~~~---~------~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~ 302 (319)
T 2y4i_B 242 PFKTQPAEAIIWQ-MGTGM---------KPNL---S------QIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPK 302 (319)
T ss_dssp SSSSCCHHHHHHH-HHTTC---------CCCC---C------CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC--
T ss_pred CCCCCCHHHHHHH-hccCC---------CCCC---C------cCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 9976433322111 00000 0000 0 01123458899999999999999999999999998876
Q ss_pred HH
Q 047800 541 SL 542 (547)
Q Consensus 541 ~~ 542 (547)
+.
T Consensus 303 ~~ 304 (319)
T 2y4i_B 303 RN 304 (319)
T ss_dssp --
T ss_pred hh
Confidence 64
No 153
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=2.7e-34 Score=284.21 Aligned_cols=194 Identities=21% Similarity=0.292 Sum_probs=160.9
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
.||||+++++++.+.+..++||||+++++|.+++.... .+++.++..++.|++.||+||| +++++|+||||+||++
T Consensus 73 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~ 148 (294)
T 2rku_A 73 AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFL 148 (294)
T ss_dssp CCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEE
T ss_pred CCCCEeeeeeeeccCCEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEE
Confidence 39999999999999999999999999999999987654 6899999999999999999999 9999999999999999
Q ss_pred CCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhh
Q 047800 396 DDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHW 475 (547)
Q Consensus 396 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~ 475 (547)
+.++.+||+|||.++.............||+.|+|||++.+..++.++||||+|+++|||++|+.||......+... ..
T Consensus 149 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~-~~ 227 (294)
T 2rku_A 149 NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL-RI 227 (294)
T ss_dssp CTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH-HH
T ss_pred cCCCCEEEEeccCceecccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HH
Confidence 99999999999999865543333444579999999999998889999999999999999999999997643322111 00
Q ss_pred hhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 476 VNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
. .... ..+..++..+.+++.+||..||++|||++|+++.
T Consensus 228 ~------------~~~~--------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 228 K------------KNEY--------SIPKHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp H------------TTCC--------CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred h------------hccC--------CCccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0 0000 0011224568899999999999999999999875
No 154
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=4.3e-34 Score=287.88 Aligned_cols=263 Identities=21% Similarity=0.273 Sum_probs=177.6
Q ss_pred cCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCccccc
Q 047800 246 ILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPVA 324 (547)
Q Consensus 246 ~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l~ 324 (547)
..+.|.++.++......+...++.+......... .....+..|+. +..++ ||||++++
T Consensus 32 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-----------~~~~~~~~E~~~l~~l~----------h~~iv~~~ 90 (331)
T 4aaa_A 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDK-----------MVKKIAMREIKLLKQLR----------HENLVNLL 90 (331)
T ss_dssp EGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCH-----------HHHHHHHHHHHHHHHCC----------CTTBCCEE
T ss_pred EEeecCCEEEEEEEECCCCceEEEEEEecCCCch-----------HHHHHHHHHHHHHhhCC----------CCCEeeEE
Confidence 4455788888877665544444443211000000 00011344554 45555 99999999
Q ss_pred cccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCCcEEEc
Q 047800 325 TSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLS 404 (547)
Q Consensus 325 ~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~~~kl~ 404 (547)
+++.+.+..++||||+++++|.++..... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+
T Consensus 91 ~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~ 166 (331)
T 4aaa_A 91 EVCKKKKRWYLVFEFVDHTILDDLELFPN-GLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLC 166 (331)
T ss_dssp EEEEETTEEEEEEECCSEEHHHHHHHSTT-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEEC
T ss_pred EEeecCCEEEEEEecCCcchHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEE
Confidence 99999999999999999988888876544 6999999999999999999999 9999999999999999999999999
Q ss_pred ccCCcccCCCCCcccccccCCCCCCCCCCCCCC-CCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhhh-hccCc
Q 047800 405 DFGIAKTGEDQSMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVN-DWLPI 482 (547)
Q Consensus 405 Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~-~~~~~ 482 (547)
|||+++.............||+.|+|||++.+. .++.++||||+||++|||++|+.||......+........ .....
T Consensus 167 Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 246 (331)
T 4aaa_A 167 DFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIP 246 (331)
T ss_dssp CCTTC------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCH
T ss_pred eCCCceeecCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCh
Confidence 999997655443334445799999999999875 6899999999999999999999999775433221111100 00000
Q ss_pred hhhhhhhhh----------hccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 483 SIMEVIDAN----------LLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 483 ~~~~~~~~~----------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
.....+... ........ .....+++++.+++.+||+.||++|||+.|+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 247 RHQELFNKNPVFAGVRLPEIKEREPLE-RRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp HHHHHHHHCGGGTTCCCCCCSSCCCHH-HHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred hhhhHhhhccccccccCccccccchhh-hcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000100000 00000000 0012335679999999999999999999999864
No 155
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=2.5e-34 Score=283.84 Aligned_cols=203 Identities=20% Similarity=0.284 Sum_probs=160.5
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~ 396 (547)
||||+++++++..+. .++|+||+++|+|.+++......+++.++..++.|++.||+||| +++++|+||||+||+++
T Consensus 80 h~~i~~~~~~~~~~~-~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~ 155 (291)
T 1u46_A 80 HRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLA 155 (291)
T ss_dssp CTTBCCEEEEECSSS-CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEE
T ss_pred CCCcccEEEEEccCC-ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEc
Confidence 999999999998765 88999999999999999876556999999999999999999999 89999999999999999
Q ss_pred CCCcEEEcccCCcccCCCCCc---ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCchhhhhhhhh
Q 047800 397 DNMVAHLSDFGIAKTGEDQSM---TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFI-GKKPTDEIFNEEMTL 472 (547)
Q Consensus 397 ~~~~~kl~Dfg~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ellt-g~~p~~~~~~~~~~~ 472 (547)
.++.+||+|||+++....... ......+|..|+|||++.+..++.++||||+|+++|||++ |+.||......+..
T Consensus 156 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~- 234 (291)
T 1u46_A 156 TRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL- 234 (291)
T ss_dssp ETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH-
T ss_pred CCCCEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHH-
Confidence 999999999999976543322 1223357888999999988889999999999999999999 99999764332211
Q ss_pred hhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHHH
Q 047800 473 KHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESL 542 (547)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~~ 542 (547)
...... .. ....+..++.++.+++.+||..||++|||+.++++.|+++...-
T Consensus 235 ~~~~~~------------~~------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 286 (291)
T 1u46_A 235 HKIDKE------------GE------RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286 (291)
T ss_dssp HHHHTS------------CC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred HHHHcc------------CC------CCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence 111000 00 00011223556899999999999999999999999999886543
No 156
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=3.3e-34 Score=286.69 Aligned_cols=203 Identities=23% Similarity=0.275 Sum_probs=159.7
Q ss_pred CCCCccccccccC----ccceeEEEEeccCCCChhHHhhh---CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCC
Q 047800 316 NDANISPVATSCS----NEEFKALILEYKPHGSLEKYLYS---GNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDI 388 (547)
Q Consensus 316 ~H~nIv~l~~~~~----~~~~~~lv~ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dl 388 (547)
.||||+++++++. .....++||||+++|+|.+++.. ....+++.+++.++.|++.||+||| +++|+||||
T Consensus 84 ~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dl 160 (317)
T 2buj_A 84 NHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDL 160 (317)
T ss_dssp CCTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCC
T ss_pred CCCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCC
Confidence 3999999999987 34578999999999999999976 3457999999999999999999999 899999999
Q ss_pred CCCcEEeCCCCcEEEcccCCcccCCCCCcc---------cccccCCCCCCCCCCCCCCC---CCcchhHHHHHHHHHHHH
Q 047800 389 KANNVLLDDNMVAHLSDFGIAKTGEDQSMT---------QTQTLATIGYMAPEYGREGR---VSANGDVYSFGIMLMKTF 456 (547)
Q Consensus 389 kp~Nill~~~~~~kl~Dfg~a~~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~---~~~~sDv~s~G~il~ell 456 (547)
||+||+++.++.+|++|||.+......... .....||+.|+|||++.+.. ++.++||||||+++|||+
T Consensus 161 kp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~ 240 (317)
T 2buj_A 161 KPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMM 240 (317)
T ss_dssp CGGGEEECTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHH
T ss_pred CHHHEEEcCCCCEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHH
Confidence 999999999999999999998754321110 11235799999999987654 689999999999999999
Q ss_pred hCCCCCchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHH
Q 047800 457 IGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLL 536 (547)
Q Consensus 457 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~ 536 (547)
+|+.||............... .... ......++.++.+++.+||+.||++|||+.++++.|+
T Consensus 241 ~g~~p~~~~~~~~~~~~~~~~------------~~~~------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 302 (317)
T 2buj_A 241 FGEGPYDMVFQKGDSVALAVQ------------NQLS------IPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLE 302 (317)
T ss_dssp HSSCTTHHHHHTTSCHHHHHH------------CC--------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred hCCCChhhhhcccchhhHHhh------------ccCC------CCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhh
Confidence 999999764332221111110 0000 0001123456899999999999999999999999998
Q ss_pred HHH
Q 047800 537 KII 539 (547)
Q Consensus 537 ~i~ 539 (547)
.+.
T Consensus 303 ~~~ 305 (317)
T 2buj_A 303 ALQ 305 (317)
T ss_dssp HTC
T ss_pred hcC
Confidence 764
No 157
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=3.3e-34 Score=281.30 Aligned_cols=214 Identities=24% Similarity=0.372 Sum_probs=168.6
Q ss_pred HHHHHH-HHHHHHhhcCCCCCCCCCccccccccCccceeEEEEeccCCCChhHHhhhCC-CCCCHHHHHHHHHHHHHHHH
Q 047800 296 FMIVVI-LLILRCRKRGKRPSNDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGN-CSLDIFQRLNSMIDVALALE 373 (547)
Q Consensus 296 ~~~~~~-~~~~~~~~~~~~~~~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~l~ 373 (547)
+..|+. +..++ ||||+++++++.. +..++||||+++|+|.+++.... ..+++.++..++.|++.||+
T Consensus 55 ~~~E~~~l~~l~----------h~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~ 123 (279)
T 1qpc_A 55 FLAEANLMKQLQ----------HQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123 (279)
T ss_dssp HHHHHHHHHHCC----------CTTBCCEEEEECS-SSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC----------CcCcceEEEEEcC-CCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHH
Confidence 455555 55555 9999999999875 45899999999999999997532 25899999999999999999
Q ss_pred HHHccCCCCccccCCCCCcEEeCCCCcEEEcccCCcccCCCCCc-ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHH
Q 047800 374 YMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSM-TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452 (547)
Q Consensus 374 ~lH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il 452 (547)
||| +++++|+||||+||+++.++.+||+|||.+........ ......++..|+|||++.+..++.++||||+|+++
T Consensus 124 ~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 200 (279)
T 1qpc_A 124 FIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200 (279)
T ss_dssp HHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHH
T ss_pred HHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHH
Confidence 999 99999999999999999999999999999986544322 12233567889999999888899999999999999
Q ss_pred HHHHh-CCCCCchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHH
Q 047800 453 MKTFI-GKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEI 531 (547)
Q Consensus 453 ~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei 531 (547)
|||++ |+.||......+. ....... .. ...+..++.++.+++.+||..||++|||++++
T Consensus 201 ~el~~~g~~p~~~~~~~~~-~~~~~~~-------------~~------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l 260 (279)
T 1qpc_A 201 TEIVTHGRIPYPGMTNPEV-IQNLERG-------------YR------MVRPDNCPEELYQLMRLCWKERPEDRPTFDYL 260 (279)
T ss_dssp HHHHTTTCCSSTTCCHHHH-HHHHHTT-------------CC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHHhCCCCCCcccCHHHH-HHHHhcc-------------cC------CCCcccccHHHHHHHHHHhccChhhCCCHHHH
Confidence 99999 9999976433221 1110000 00 00112234568999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 047800 532 VTRLLKIIESLL 543 (547)
Q Consensus 532 l~~L~~i~~~~~ 543 (547)
++.|+.+..+..
T Consensus 261 ~~~l~~~~~~~~ 272 (279)
T 1qpc_A 261 RSVLEDFFTATE 272 (279)
T ss_dssp HHHHHHHHHHC-
T ss_pred HHHHHHHHHhcc
Confidence 999999877643
No 158
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=4e-34 Score=287.53 Aligned_cols=219 Identities=21% Similarity=0.239 Sum_probs=165.3
Q ss_pred CCCCccccccccC--ccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcE
Q 047800 316 NDANISPVATSCS--NEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393 (547)
Q Consensus 316 ~H~nIv~l~~~~~--~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Ni 393 (547)
.||||+++++++. .....++||||+++|+|.+++......+++.+++.++.|++.||+||| +++|+|+||||+||
T Consensus 82 ~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NI 158 (327)
T 3lxl_A 82 HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNI 158 (327)
T ss_dssp CCTTBCCEEEEEECSSSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGE
T ss_pred CCCceeEEEEEEecCCCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhE
Confidence 3999999999876 456789999999999999999875556999999999999999999999 99999999999999
Q ss_pred EeCCCCcEEEcccCCcccCCCCCc---ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhh
Q 047800 394 LLDDNMVAHLSDFGIAKTGEDQSM---TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEM 470 (547)
Q Consensus 394 ll~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~ 470 (547)
+++.++.+||+|||+++....... ......+|..|+|||++.+..++.++||||+|+++|||++|+.||........
T Consensus 159 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~ 238 (327)
T 3lxl_A 159 LVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFL 238 (327)
T ss_dssp EEEETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHH
T ss_pred EECCCCCEEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhh
Confidence 999999999999999986543321 22234678889999999888899999999999999999999999876433221
Q ss_pred hhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHHH
Q 047800 471 TLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESL 542 (547)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~~ 542 (547)
....... ............... .....+..+++++.+++.+||+.||++|||+.|+++.|+.+....
T Consensus 239 ~~~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 305 (327)
T 3lxl_A 239 RMMGCER--DVPALSRLLELLEEG---QRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305 (327)
T ss_dssp HHCC------CCHHHHHHHHHHTT---CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred hhccccc--ccccHHHHHHHhhcc---cCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 1111000 001111111110000 011112334567999999999999999999999999999886654
No 159
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=5.7e-34 Score=284.39 Aligned_cols=209 Identities=22% Similarity=0.359 Sum_probs=155.5
Q ss_pred hhcCCCCCCCCCccccccccCccc----eeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCc
Q 047800 308 RKRGKRPSNDANISPVATSCSNEE----FKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPV 383 (547)
Q Consensus 308 ~~~~~~~~~H~nIv~l~~~~~~~~----~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i 383 (547)
+....+..+||||+++++++.... ..++||||+++|+|.+++.... .+++.+++.++.|++.||+||| +++|
T Consensus 62 E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i 137 (311)
T 3ork_A 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSH---QNGI 137 (311)
T ss_dssp HHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTC
T ss_pred HHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCC
Confidence 344445567999999999987654 3499999999999999998654 6999999999999999999999 9999
Q ss_pred cccCCCCCcEEeCCCCcEEEcccCCcccCCCCCc---ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCC
Q 047800 384 IHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSM---TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKK 460 (547)
Q Consensus 384 ~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~ 460 (547)
+||||||+||+++.++.+||+|||+++....... ......||+.|+|||++.+..++.++||||+|+++|||++|+.
T Consensus 138 vH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~ 217 (311)
T 3ork_A 138 IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP 217 (311)
T ss_dssp CCCCCCGGGEEEETTSCEEECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred CcCCCCHHHEEEcCCCCEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999976543221 1223468999999999999899999999999999999999999
Q ss_pred CCchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHH-HHHH
Q 047800 461 PTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVT-RLLK 537 (547)
Q Consensus 461 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~-~L~~ 537 (547)
||..................+ .......++.++.+++.+||+.||++||++.+++. .+.+
T Consensus 218 pf~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 278 (311)
T 3ork_A 218 PFTGDSPVSVAYQHVREDPIP-----------------PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR 278 (311)
T ss_dssp SCCCSSHHHHHHHHHHCCCCC-----------------HHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred CCCCCChHHHHHHHhcCCCCC-----------------cccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHH
Confidence 997644332211111110000 00001223566899999999999999997766654 3443
No 160
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=6.5e-34 Score=311.07 Aligned_cols=203 Identities=24% Similarity=0.371 Sum_probs=162.8
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~ 396 (547)
||||+++++++.+ +..++||||+++|+|.+++......+++..++.++.|++.||+||| +++|+||||||+||+++
T Consensus 450 HpnIv~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~ 525 (656)
T 2j0j_A 450 HPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVS 525 (656)
T ss_dssp CTTBCCEEEEECS-SSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEE
T ss_pred CCCCCeEEEEEec-CceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEe
Confidence 9999999999854 5689999999999999999877667999999999999999999999 89999999999999999
Q ss_pred CCCcEEEcccCCcccCCCCCc-ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCchhhhhhhhhhh
Q 047800 397 DNMVAHLSDFGIAKTGEDQSM-TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFI-GKKPTDEIFNEEMTLKH 474 (547)
Q Consensus 397 ~~~~~kl~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ellt-g~~p~~~~~~~~~~~~~ 474 (547)
.++.+||+|||+++....... ......+|+.|+|||++.+..++.++||||||+++|||++ |..||......+.. ..
T Consensus 526 ~~~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~-~~ 604 (656)
T 2j0j_A 526 SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI-GR 604 (656)
T ss_dssp ETTEEEECCCCCCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH-HH
T ss_pred CCCCEEEEecCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHH-HH
Confidence 999999999999986543322 1223356789999999988889999999999999999997 99999764332211 11
Q ss_pred hhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHHHH
Q 047800 475 WVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESLL 543 (547)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~~~ 543 (547)
.. ... ....+..+++++.+++.+||..||++|||+.++++.|+.+.++..
T Consensus 605 i~------------~~~-------~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~k 654 (656)
T 2j0j_A 605 IE------------NGE-------RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 654 (656)
T ss_dssp HH------------HTC-------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred HH------------cCC-------CCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhc
Confidence 00 000 000112235678999999999999999999999999999987653
No 161
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=2.1e-33 Score=277.27 Aligned_cols=194 Identities=20% Similarity=0.321 Sum_probs=154.2
Q ss_pred CCCCccccccccCc----cceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCC--ccccCCC
Q 047800 316 NDANISPVATSCSN----EEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAP--VIHCDIK 389 (547)
Q Consensus 316 ~H~nIv~l~~~~~~----~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~--i~H~dlk 389 (547)
.||||+++++++.. ....++||||+++|+|.+++.... .+++..+..++.|++.||+||| +.+ ++|+|||
T Consensus 83 ~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dik 158 (290)
T 1t4h_A 83 QHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLK 158 (290)
T ss_dssp CCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCC
T ss_pred CCCCeeeeeeeeccccCCCceEEEEEEecCCCCHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCC
Confidence 39999999998764 466899999999999999998753 6899999999999999999999 888 9999999
Q ss_pred CCcEEeC-CCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhh
Q 047800 390 ANNVLLD-DNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNE 468 (547)
Q Consensus 390 p~Nill~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~ 468 (547)
|+||+++ .++.+||+|||++....... .....||+.|+|||++. +.++.++||||+|+++|+|++|+.||......
T Consensus 159 p~Nil~~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~ 235 (290)
T 1t4h_A 159 CDNIFITGPTGSVKIGDLGLATLKRASF--AKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNA 235 (290)
T ss_dssp GGGEEESSTTSCEEECCTTGGGGCCTTS--BEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH
T ss_pred HHHEEEECCCCCEEEeeCCCcccccccc--cccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcH
Confidence 9999997 78999999999997544332 23446999999999886 45899999999999999999999999764333
Q ss_pred hhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 469 EMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
............+. ..+...++++.+++.+||..||++|||+.|+++.
T Consensus 236 ~~~~~~~~~~~~~~------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 236 AQIYRRVTSGVKPA------------------SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp HHHHHHHTTTCCCG------------------GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHhccCCcc------------------ccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 22221111110000 0011123468999999999999999999999863
No 162
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-33 Score=287.37 Aligned_cols=223 Identities=13% Similarity=0.099 Sum_probs=168.6
Q ss_pred HHHHHH-HHHHHHhhcCCCCCCCCCccc---------------cccccCc-cceeEEEEeccCCCChhHHhhhC-CCCCC
Q 047800 296 FMIVVI-LLILRCRKRGKRPSNDANISP---------------VATSCSN-EEFKALILEYKPHGSLEKYLYSG-NCSLD 357 (547)
Q Consensus 296 ~~~~~~-~~~~~~~~~~~~~~~H~nIv~---------------l~~~~~~-~~~~~lv~ey~~~gsL~~~l~~~-~~~l~ 357 (547)
+..|+. +..++ ||||++ +++++.. ....++||||+ +|+|.+++... ...++
T Consensus 89 ~~~E~~~l~~l~----------h~niv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~ 157 (352)
T 2jii_A 89 LFNEQNFFQRAA----------KPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLS 157 (352)
T ss_dssp HHHHHHHHHHHC----------CHHHHHHHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCC
T ss_pred HHHHHHHHHHhc----------ccchhhhhhhhccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCC
Confidence 445555 55556 777776 5555554 67889999999 99999999875 24699
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCC--cEEEcccCCcccCCCCCc-------ccccccCCCCC
Q 047800 358 IFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNM--VAHLSDFGIAKTGEDQSM-------TQTQTLATIGY 428 (547)
Q Consensus 358 ~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~--~~kl~Dfg~a~~~~~~~~-------~~~~~~gt~~y 428 (547)
+.+++.++.|++.||+||| +++|+||||||+||+++.++ .+||+|||+++....... ......||+.|
T Consensus 158 ~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y 234 (352)
T 2jii_A 158 ERSVLQVACRLLDALEFLH---ENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEF 234 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTT
T ss_pred HHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccc
Confidence 9999999999999999999 89999999999999999988 999999999976543221 11234799999
Q ss_pred CCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHH
Q 047800 429 MAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMS 508 (547)
Q Consensus 429 ~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (547)
+|||++.+..++.++||||||+++|||++|+.||.................. ........ .......++.
T Consensus 235 ~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~---------~~~~~~~~-~~~~~~~~~~ 304 (352)
T 2jii_A 235 ISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFV---------DKPGPFVG-PCGHWIRPSE 304 (352)
T ss_dssp CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHH---------HSCCCEEC-TTSCEECCCH
T ss_pred cCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhcc---------CChhhhhh-hccccCCCcH
Confidence 9999999989999999999999999999999999875422222221111000 00000000 0000011245
Q ss_pred HHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHHH
Q 047800 509 FVFNLAMECTVESPEQRINPKEIVTRLLKIIESL 542 (547)
Q Consensus 509 ~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~~ 542 (547)
++.+++.+||..||++|||++++++.|+++.++.
T Consensus 305 ~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 338 (352)
T 2jii_A 305 TLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDL 338 (352)
T ss_dssp HHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhc
Confidence 6899999999999999999999999999998765
No 163
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=2.7e-33 Score=294.86 Aligned_cols=187 Identities=19% Similarity=0.238 Sum_probs=132.7
Q ss_pred ccCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCcccc
Q 047800 245 EILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPV 323 (547)
Q Consensus 245 ~~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l 323 (547)
...+.|.++.++......+...+++|......... ....-+..|+. +..++ |||||++
T Consensus 59 ~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~-----------~~~~~~~~E~~~l~~l~----------h~niv~l 117 (458)
T 3rp9_A 59 HLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDL-----------IDCKRILREIAILNRLN----------HDHVVKV 117 (458)
T ss_dssp CC-------CEEEEEECC--CEEEEEEECSTTSSH-----------HHHHHHHHHHHHHHHCC----------CTTBCCE
T ss_pred eEeeecCCeEEEEEEECCCCcEEEEEEechhhcCH-----------HHHHHHHHHHHHHHhCC----------CCCCCce
Confidence 44566889998877655544445544211100000 00011444554 55555 9999999
Q ss_pred ccccCcc-----ceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCC
Q 047800 324 ATSCSNE-----EFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDN 398 (547)
Q Consensus 324 ~~~~~~~-----~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~ 398 (547)
++++... ...++||||+ +|+|.+++.... .+++..+..++.||+.||+||| +++|+||||||+|||++.+
T Consensus 118 ~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~ 192 (458)
T 3rp9_A 118 LDIVIPKDVEKFDELYVVLEIA-DSDFKKLFRTPV-YLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQD 192 (458)
T ss_dssp EEECCCSCTTTCCCEEEEECCC-SEEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTT
T ss_pred EEEEecCCcccCceEEEEEecc-ccchhhhcccCC-CCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCC
Confidence 9998533 5789999998 569999998754 6999999999999999999999 9999999999999999999
Q ss_pred CcEEEcccCCcccCCCCC---------------------------cccccccCCCCCCCCCCC-CCCCCCcchhHHHHHH
Q 047800 399 MVAHLSDFGIAKTGEDQS---------------------------MTQTQTLATIGYMAPEYG-REGRVSANGDVYSFGI 450 (547)
Q Consensus 399 ~~~kl~Dfg~a~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~sDv~s~G~ 450 (547)
+.+||+|||+++...... ......+||++|+|||++ .+..++.++||||+||
T Consensus 193 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~ 272 (458)
T 3rp9_A 193 CSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGC 272 (458)
T ss_dssp CCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHH
T ss_pred CCEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHH
Confidence 999999999998654221 112334789999999976 4566999999999999
Q ss_pred HHHHHHh
Q 047800 451 MLMKTFI 457 (547)
Q Consensus 451 il~ellt 457 (547)
++|||++
T Consensus 273 il~ellt 279 (458)
T 3rp9_A 273 IFAELLN 279 (458)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 9999999
No 164
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=5.5e-34 Score=280.23 Aligned_cols=242 Identities=21% Similarity=0.258 Sum_probs=180.5
Q ss_pred cCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCccccc
Q 047800 246 ILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPVA 324 (547)
Q Consensus 246 ~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l~ 324 (547)
..+.|.++.++......+...++.+.... ... .+..|+. +..++ ||||++++
T Consensus 18 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~--------------~~~~e~~~l~~l~----------h~~i~~~~ 70 (284)
T 2a19_B 18 LIGSGGFGQVFKAKHRIDGKTYVIKRVKY---NNE--------------KAEREVKALAKLD----------HVNIVHYN 70 (284)
T ss_dssp EEECSSSCCEEEEEETTTCCEEEEEEEEC---CSG--------------GGHHHHHHHHHCC----------CTTBCCEE
T ss_pred eeccCCceEEEEEEEcCCCeEEEEEEecc---ccH--------------HHHHHHHHHHhCC----------CCCEEEEe
Confidence 34557788887766554433344331110 000 1334444 55555 99999999
Q ss_pred cccCc----------------cceeEEEEeccCCCChhHHhhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccC
Q 047800 325 TSCSN----------------EEFKALILEYKPHGSLEKYLYSG-NCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCD 387 (547)
Q Consensus 325 ~~~~~----------------~~~~~lv~ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~d 387 (547)
+++.. ....++||||+++|+|.+++... ...+++..++.++.|++.||.||| +++|+|+|
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~d 147 (284)
T 2a19_B 71 GCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLINRD 147 (284)
T ss_dssp EEEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSC
T ss_pred eeEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecc
Confidence 98754 45589999999999999999754 246899999999999999999999 89999999
Q ss_pred CCCCcEEeCCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhh
Q 047800 388 IKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFN 467 (547)
Q Consensus 388 lkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~ 467 (547)
|||+||+++.++.+||+|||++........ .....||+.|+|||++.+..++.++||||||+++|||++|..|+.....
T Consensus 148 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~ 226 (284)
T 2a19_B 148 LKPSNIFLVDTKQVKIGDFGLVTSLKNDGK-RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSK 226 (284)
T ss_dssp CSGGGEEEEETTEEEECCCTTCEESSCCSC-CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHH
T ss_pred CCHHHEEEcCCCCEEECcchhheecccccc-ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHH
Confidence 999999999999999999999986554322 2344699999999999988899999999999999999999999754211
Q ss_pred hhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHHHH
Q 047800 468 EEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESLL 543 (547)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~~~ 543 (547)
.. ... ... .. +..++..+.+++.+||..||++|||+.|+++.|+.+..+..
T Consensus 227 ~~---~~~------------~~~-~~---------~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 227 FF---TDL------------RDG-II---------SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp HH---HHH------------HTT-CC---------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred HH---HHh------------hcc-cc---------cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 00 000 000 00 01123458899999999999999999999999998866543
No 165
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-33 Score=285.68 Aligned_cols=257 Identities=20% Similarity=0.293 Sum_probs=176.3
Q ss_pred EeCCCCccc-cccCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCC
Q 047800 235 LDLSFNKLE-GEILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGK 312 (547)
Q Consensus 235 l~l~~N~l~-~~~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 312 (547)
+.+.++... ....+.|.++.++......+ ..++.+......... .....+..|+. +..++
T Consensus 4 i~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~-----------~~~~~~~~E~~~l~~l~------ 65 (343)
T 3dbq_A 4 ISVKGRIYSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADN-----------QTLDSYRNEIAYLNKLQ------ 65 (343)
T ss_dssp EESSSCEEEEEEEESCCSSEEEEEEECTTS-CEEEEEEEECTTCCH-----------HHHHHHHHHHHHHHHHT------
T ss_pred eeeecCEEEEEEEEecCCCeEEEEEEeCCC-CEEEEEEeeccccch-----------HHHHHHHHHHHHHHhhh------
Confidence 445555544 23456688999887654332 223333111000000 00011455555 55555
Q ss_pred CCCCCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCc
Q 047800 313 RPSNDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANN 392 (547)
Q Consensus 313 ~~~~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~N 392 (547)
.+||||+++++++..+...++|||| .+|+|.+++.... .+++.++..++.|++.||+||| +++|+||||||+|
T Consensus 66 --~~~~~iv~~~~~~~~~~~~~lv~e~-~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~N 138 (343)
T 3dbq_A 66 --QHSDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPAN 138 (343)
T ss_dssp --TTCTTBCCEEEEEECSSEEEEEECC-CSEEHHHHHHHSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGG
T ss_pred --hcCCceEEEeeeEeeCCEEEEEEeC-CCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcce
Confidence 0139999999999999999999995 5889999998864 6899999999999999999999 9999999999999
Q ss_pred EEeCCCCcEEEcccCCcccCCCCCc--ccccccCCCCCCCCCCCCC-----------CCCCcchhHHHHHHHHHHHHhCC
Q 047800 393 VLLDDNMVAHLSDFGIAKTGEDQSM--TQTQTLATIGYMAPEYGRE-----------GRVSANGDVYSFGIMLMKTFIGK 459 (547)
Q Consensus 393 ill~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDv~s~G~il~elltg~ 459 (547)
|+++ ++.+||+|||+++....... ......||+.|+|||++.+ ..++.++|||||||++|||++|+
T Consensus 139 Ill~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~ 217 (343)
T 3dbq_A 139 FLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 217 (343)
T ss_dssp EEEE-TTEEEECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSS
T ss_pred EEEE-CCcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCC
Confidence 9997 57899999999986543322 2234579999999999864 56899999999999999999999
Q ss_pred CCCchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHH
Q 047800 460 KPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRL 535 (547)
Q Consensus 460 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L 535 (547)
.||............ .++...... .+...+.++.+++.+||+.||++|||+.|+++..
T Consensus 218 ~pf~~~~~~~~~~~~------------~~~~~~~~~------~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp 275 (343)
T 3dbq_A 218 TPFQQIINQISKLHA------------IIDPNHEIE------FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 275 (343)
T ss_dssp CTTTTCCSHHHHHHH------------HHCTTSCCC------CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred CcchhhhhHHHHHHH------------HhcCCcccC------CcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence 999764332221111 111111000 0011134588999999999999999999998653
No 166
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=2.7e-34 Score=289.81 Aligned_cols=194 Identities=21% Similarity=0.295 Sum_probs=160.8
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
.||||+++++++.+.+..++||||+++++|.+++.... .+++.+++.++.|++.||+||| +++|+|+||||+||++
T Consensus 99 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~ 174 (335)
T 2owb_A 99 AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFL 174 (335)
T ss_dssp CCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEE
T ss_pred CCCCCCeEEEEEecCCeEEEEEecCCCCCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEE
Confidence 39999999999999999999999999999999987654 6899999999999999999999 8999999999999999
Q ss_pred CCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhh
Q 047800 396 DDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHW 475 (547)
Q Consensus 396 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~ 475 (547)
+.++.+||+|||+++.............||+.|+|||++.+..++.++||||||+++|||++|+.||......+.... .
T Consensus 175 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-~ 253 (335)
T 2owb_A 175 NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLR-I 253 (335)
T ss_dssp CTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH-H
T ss_pred cCCCCEEEeeccCceecccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHH-H
Confidence 999999999999998665433334445799999999999988899999999999999999999999976432221110 0
Q ss_pred hhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 476 VNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
. .... ..+..++.++.+++.+||+.||++|||++|+++.
T Consensus 254 ~------------~~~~--------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 254 K------------KNEY--------SIPKHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp H------------HTCC--------CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred h------------cCCC--------CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0 0000 0011224568899999999999999999999864
No 167
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.2e-33 Score=295.11 Aligned_cols=204 Identities=17% Similarity=0.192 Sum_probs=148.6
Q ss_pred eEeCCCCccccccCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCC
Q 047800 234 DLDLSFNKLEGEILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGK 312 (547)
Q Consensus 234 ~l~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 312 (547)
...+.++--.....+.|.++.++......+...++.|......... ....-+..|+. +..++
T Consensus 21 ~~~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~-----------~~~~~~~~E~~~l~~l~------ 83 (432)
T 3n9x_A 21 NVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDL-----------IDCKRILREITILNRLK------ 83 (432)
T ss_dssp GCCCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSH-----------HHHHHHHHHHHHHHHCC------
T ss_pred cceecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcCh-----------HHHHHHHHHHHHHHHcC------
Confidence 3344444444455566888888877655555445544221100000 00011444554 55555
Q ss_pred CCCCCCCccccccccCcc-----ceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccC
Q 047800 313 RPSNDANISPVATSCSNE-----EFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCD 387 (547)
Q Consensus 313 ~~~~H~nIv~l~~~~~~~-----~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~d 387 (547)
||||+++++++... ...++||||++ |+|.++++... .+++..+..++.|++.||+||| +++|+|||
T Consensus 84 ----h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~i~~qil~aL~~LH---~~givHrD 154 (432)
T 3n9x_A 84 ----SDYIIRLYDLIIPDDLLKFDELYIVLEIAD-SDLKKLFKTPI-FLTEEHIKTILYNLLLGENFIH---ESGIIHRD 154 (432)
T ss_dssp ----CTTBCCEEEECCCSCTTTCCCEEEEEECCS-EEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCC
T ss_pred ----CCCcceEEEEEecCCCCcCCeEEEEEecCC-cCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCCCC
Confidence 99999999999766 57899999996 59999998754 6999999999999999999999 99999999
Q ss_pred CCCCcEEeCCCCcEEEcccCCcccCCCCCc----------------------ccccccCCCCCCCCCCC-CCCCCCcchh
Q 047800 388 IKANNVLLDDNMVAHLSDFGIAKTGEDQSM----------------------TQTQTLATIGYMAPEYG-REGRVSANGD 444 (547)
Q Consensus 388 lkp~Nill~~~~~~kl~Dfg~a~~~~~~~~----------------------~~~~~~gt~~y~aPE~~-~~~~~~~~sD 444 (547)
|||+||+++.++.+||+|||+++....... .....+||++|+|||++ .+..++.++|
T Consensus 155 lkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~D 234 (432)
T 3n9x_A 155 LKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSID 234 (432)
T ss_dssp CCGGGEEECTTCCEEECCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHH
T ss_pred CCHHHeEECCCCCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccc
Confidence 999999999999999999999986543211 12445799999999986 4566999999
Q ss_pred HHHHHHHHHHHHhCCCCCc
Q 047800 445 VYSFGIMLMKTFIGKKPTD 463 (547)
Q Consensus 445 v~s~G~il~elltg~~p~~ 463 (547)
|||+||++|||++|..||.
T Consensus 235 iwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 235 IWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp HHHHHHHHHHHHTTCTTTC
T ss_pred cchHHHHHHHHHhcccccc
Confidence 9999999999998655543
No 168
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=2e-33 Score=275.06 Aligned_cols=197 Identities=23% Similarity=0.300 Sum_probs=159.2
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
.||||+++++++.+++..++||||+++|+|.+++.... .+++.++..++.|++.||+||| +++++|+||||+||++
T Consensus 63 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~ 138 (276)
T 2yex_A 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLL 138 (276)
T ss_dssp CCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEE
T ss_pred CCCCceeeeeEEEcCCEEEEEEEecCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEE
Confidence 39999999999999999999999999999999997653 6899999999999999999999 9999999999999999
Q ss_pred CCCCcEEEcccCCcccCCCCC--cccccccCCCCCCCCCCCCCCCC-CcchhHHHHHHHHHHHHhCCCCCchhhhhhhhh
Q 047800 396 DDNMVAHLSDFGIAKTGEDQS--MTQTQTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTL 472 (547)
Q Consensus 396 ~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~ 472 (547)
+.++.+|++|||.+....... .......|++.|+|||++.+..+ +.++||||+|+++|||++|+.||..........
T Consensus 139 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~ 218 (276)
T 2yex_A 139 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218 (276)
T ss_dssp CTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHH
T ss_pred ccCCCEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHH
Confidence 999999999999997543221 12234578999999999987775 788999999999999999999997644333222
Q ss_pred hhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 473 KHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
..+...... ......+++.+.+++.+||..||++|||+.|+++.
T Consensus 219 ~~~~~~~~~------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 219 SDWKEKKTY------------------LNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp HHHHTTCTT------------------STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred HHhhhcccc------------------cCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 222111000 00011234568899999999999999999999763
No 169
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.4e-33 Score=285.14 Aligned_cols=217 Identities=18% Similarity=0.260 Sum_probs=165.1
Q ss_pred CCCCccccccccCccc----eeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHcc-----CCCCcccc
Q 047800 316 NDANISPVATSCSNEE----FKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFG-----YSAPVIHC 386 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~----~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-----~~~~i~H~ 386 (547)
.||||+++++++.... ..++||||+++|+|.+++... .+++.+++.++.|++.||+|||.. .+++|+||
T Consensus 94 ~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~ 171 (342)
T 1b6c_B 94 RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR 171 (342)
T ss_dssp CCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECS
T ss_pred CCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeC
Confidence 4999999999998775 789999999999999999875 489999999999999999999932 14689999
Q ss_pred CCCCCcEEeCCCCcEEEcccCCcccCCCCCc----ccccccCCCCCCCCCCCCCCC------CCcchhHHHHHHHHHHHH
Q 047800 387 DIKANNVLLDDNMVAHLSDFGIAKTGEDQSM----TQTQTLATIGYMAPEYGREGR------VSANGDVYSFGIMLMKTF 456 (547)
Q Consensus 387 dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~------~~~~sDv~s~G~il~ell 456 (547)
||||+||+++.++.+||+|||+++....... ......||+.|+|||++.+.. ++.++||||||+++|||+
T Consensus 172 Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~ 251 (342)
T 1b6c_B 172 DLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 251 (342)
T ss_dssp CCSGGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHEEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHH
Confidence 9999999999999999999999975443321 123447999999999997652 347899999999999999
Q ss_pred hC----------CCCCchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCC
Q 047800 457 IG----------KKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRI 526 (547)
Q Consensus 457 tg----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 526 (547)
+| ..||............+... +........... ......+...+.+++.+||+.||++||
T Consensus 252 tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~Rp 322 (342)
T 1b6c_B 252 RRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKV--------VCEQKLRPNIPN-RWQSCEALRVMAKIMRECWYANGAARL 322 (342)
T ss_dssp TTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHH--------HTTSCCCCCCCG-GGGTSHHHHHHHHHHHHHCCSSGGGSC
T ss_pred hccCcCCcccccccCccccCcCcccHHHHHHH--------HHHHHhCCCCcc-cccchhHHHHHHHHHHHHhccChhhCC
Confidence 99 67776543222211111111 001100000000 011234567799999999999999999
Q ss_pred ChHHHHHHHHHHHHHHH
Q 047800 527 NPKEIVTRLLKIIESLL 543 (547)
Q Consensus 527 s~~eil~~L~~i~~~~~ 543 (547)
|+.++++.|+.+.++..
T Consensus 323 s~~~i~~~L~~i~~~~~ 339 (342)
T 1b6c_B 323 TALRIKKTLSQLSQQEG 339 (342)
T ss_dssp CHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHHhc
Confidence 99999999999987653
No 170
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=4.2e-34 Score=280.48 Aligned_cols=201 Identities=26% Similarity=0.368 Sum_probs=156.0
Q ss_pred CCCCccccccccCcc-ceeEEEEeccCCCChhHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcE
Q 047800 316 NDANISPVATSCSNE-EFKALILEYKPHGSLEKYLYSGN-CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~-~~~~lv~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Ni 393 (547)
.||||+++++++.+. +..++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +++++|+||||+||
T Consensus 72 ~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Ni 148 (278)
T 1byg_A 72 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNV 148 (278)
T ss_dssp CCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGE
T ss_pred CCCCEeeEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceE
Confidence 399999999986544 57899999999999999997643 23789999999999999999999 99999999999999
Q ss_pred EeCCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCchhhhhhhhh
Q 047800 394 LLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFI-GKKPTDEIFNEEMTL 472 (547)
Q Consensus 394 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ellt-g~~p~~~~~~~~~~~ 472 (547)
+++.++.+||+|||++...... .....+++.|+|||++.+..++.++||||+|+++|||++ |+.||......+..
T Consensus 149 l~~~~~~~~l~Dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~- 224 (278)
T 1byg_A 149 LVSEDNVAKVSDFGLTKEASST---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV- 224 (278)
T ss_dssp EECTTSCEEECCCCC---------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHH-
T ss_pred EEeCCCcEEEeecccccccccc---ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHH-
Confidence 9999999999999998754432 122357889999999988889999999999999999998 99999764322211
Q ss_pred hhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHHH
Q 047800 473 KHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESL 542 (547)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~~ 542 (547)
.. +..... ...+..+++.+.+++.+||+.||++|||+.++++.|+++....
T Consensus 225 ~~-------------~~~~~~------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 225 PR-------------VEKGYK------MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp HH-------------HTTTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred HH-------------HhcCCC------CCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 00 000000 0011223456899999999999999999999999999987653
No 171
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.9e-33 Score=308.36 Aligned_cols=194 Identities=18% Similarity=0.298 Sum_probs=161.3
Q ss_pred CCCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEE
Q 047800 315 SNDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394 (547)
Q Consensus 315 ~~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nil 394 (547)
.+||||+++++++.+.+..++||||+++|+|.+++...+ .+++.+++.++.||+.||+||| +++|+||||||+|||
T Consensus 399 ~~~~~i~~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NIL 474 (674)
T 3pfq_A 399 GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVM 474 (674)
T ss_dssp TCCTTBCCEEEECBCSSEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEE
T ss_pred cCCCeEEEEEEEEEeCCEEEEEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEE
Confidence 469999999999999999999999999999999998754 6999999999999999999999 999999999999999
Q ss_pred eCCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhh
Q 047800 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKH 474 (547)
Q Consensus 395 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~ 474 (547)
++.++.+||+|||+++.............||+.|+|||++.+..++.++|||||||++|||++|+.||......+. ...
T Consensus 475 l~~~g~ikL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~-~~~ 553 (674)
T 3pfq_A 475 LDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL-FQS 553 (674)
T ss_dssp ECSSSCEEECCCTTCEECCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHH
T ss_pred EcCCCcEEEeecceeeccccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHH-HHH
Confidence 9999999999999998644333344556899999999999999999999999999999999999999976433221 111
Q ss_pred hhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCCh-----HHHHH
Q 047800 475 WVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINP-----KEIVT 533 (547)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~-----~eil~ 533 (547)
+..... ..+..+++++.+++.+||..||++||++ +||++
T Consensus 554 ------------i~~~~~--------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 554 ------------IMEHNV--------AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp ------------HHSSCC--------CCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred ------------HHhCCC--------CCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 111100 0112235678999999999999999998 56553
No 172
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.7e-33 Score=298.57 Aligned_cols=195 Identities=19% Similarity=0.242 Sum_probs=156.1
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~ 396 (547)
||||+++++++.+....++||||+++|+|.+++.... .+++.++..++.|++.||.||| +++|+||||||+||+++
T Consensus 80 hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~ 155 (486)
T 3mwu_A 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLE 155 (486)
T ss_dssp CTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEES
T ss_pred CCCcCeEEEEEEcCCEEEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEe
Confidence 9999999999999999999999999999999887654 6999999999999999999999 99999999999999995
Q ss_pred ---CCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhh
Q 047800 397 ---DNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLK 473 (547)
Q Consensus 397 ---~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~ 473 (547)
.++.+||+|||+++...... ......||+.|+|||++.+ .++.++||||+||++|+|++|++||......+. +.
T Consensus 156 ~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~ 232 (486)
T 3mwu_A 156 SKEKDCDIKIIDFGLSTCFQQNT-KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI-LK 232 (486)
T ss_dssp SSSTTCCEEECSCSCTTTBCCC-----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HH
T ss_pred cCCCCCCEEEEECCcCeECCCCC-ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HH
Confidence 55689999999997654332 2334579999999999875 599999999999999999999999976433221 11
Q ss_pred hhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 474 HWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
...... ..........+++++.+++.+||..||++|||+.++++.
T Consensus 233 ~i~~~~----------------~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 233 RVETGK----------------YAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp HHHHTC----------------CCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred HHHhCC----------------CCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 111000 000001112235668999999999999999999999874
No 173
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=2e-33 Score=279.48 Aligned_cols=195 Identities=17% Similarity=0.263 Sum_probs=158.2
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe-
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL- 395 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill- 395 (547)
||||+++++++.+....++||||+++|+|.+++...+ .+++.++..++.|++.||+||| +++++|+||||+||++
T Consensus 65 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~ 140 (304)
T 2jam_A 65 HENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYL 140 (304)
T ss_dssp CTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEES
T ss_pred CCCeeehhhhcccCCEEEEEEEcCCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEe
Confidence 9999999999999999999999999999999987654 6899999999999999999999 8999999999999999
Q ss_pred --CCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhh
Q 047800 396 --DDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLK 473 (547)
Q Consensus 396 --~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~ 473 (547)
+.++.+|++|||.++..... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||........ ..
T Consensus 141 ~~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~ 217 (304)
T 2jam_A 141 TPEENSKIMITDFGLSKMEQNG--IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKL-FE 217 (304)
T ss_dssp SSSTTCCEEBCSCSTTCCCCCB--TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HH
T ss_pred cCCCCCCEEEccCCcceecCCC--ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHH-HH
Confidence 78899999999999754432 12334689999999999998999999999999999999999999976433221 11
Q ss_pred hhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 474 HWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
........ .. ......++.++.+++.+||..||++|||+.|+++.
T Consensus 218 ~i~~~~~~------------~~----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 218 KIKEGYYE------------FE----SPFWDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp HHHHCCCC------------CC----TTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred HHHcCCCC------------CC----ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11110000 00 00012234568999999999999999999999864
No 174
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=8.6e-34 Score=285.45 Aligned_cols=213 Identities=19% Similarity=0.225 Sum_probs=151.9
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
.||||+++++++.++...++||||++ |+|.+++.... .+++.++..++.|++.||+||| +++|+||||||+||++
T Consensus 91 ~h~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll 165 (329)
T 3gbz_A 91 QHRNIIELKSVIHHNHRLHLIFEYAE-NDLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLL 165 (329)
T ss_dssp CCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEE
T ss_pred CCCCcceEEEEEecCCEEEEEEecCC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEE
Confidence 39999999999999999999999997 59999998765 6999999999999999999999 8999999999999999
Q ss_pred -----CCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCC-CCcchhHHHHHHHHHHHHhCCCCCchhhhhh
Q 047800 396 -----DDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGR-VSANGDVYSFGIMLMKTFIGKKPTDEIFNEE 469 (547)
Q Consensus 396 -----~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDv~s~G~il~elltg~~p~~~~~~~~ 469 (547)
+..+.+||+|||+++.............||+.|+|||++.+.. ++.++||||+||++|||++|+.||......+
T Consensus 166 ~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~ 245 (329)
T 3gbz_A 166 SVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEID 245 (329)
T ss_dssp EC-----CCEEEECCTTHHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred ecCCCCccceEEECcCCCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHH
Confidence 4556699999999976543333344457899999999998754 8999999999999999999999997654332
Q ss_pred hhhhhhhhhccCc--hhhhhh-----hhhhc--cchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHH
Q 047800 470 MTLKHWVNDWLPI--SIMEVI-----DANLL--SREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVT 533 (547)
Q Consensus 470 ~~~~~~~~~~~~~--~~~~~~-----~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~ 533 (547)
...........+. ...... ..... .........+..+++++.+++.+||+.||++|||++|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 246 QLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp HHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 2111110000000 000000 00000 0000011111223467899999999999999999999976
No 175
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.4e-33 Score=299.70 Aligned_cols=245 Identities=18% Similarity=0.249 Sum_probs=175.5
Q ss_pred cCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCccccc
Q 047800 246 ILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPVA 324 (547)
Q Consensus 246 ~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l~ 324 (547)
..+.|.++.++......+...++.+........... ...+..|+. +..++ |||||+++
T Consensus 44 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~-----------~~~~~~E~~~l~~l~----------hpniv~~~ 102 (494)
T 3lij_A 44 KLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSS-----------NSKLLEEVAVLKLLD----------HPNIMKLY 102 (494)
T ss_dssp EEECC---EEEEEEETTTCCEEEEEEEEC-----CT-----------THHHHHHHHHHTTCC----------CTTBCCEE
T ss_pred EEecCCCEEEEEEEECCCCcEEEEEEEeccccCchH-----------HHHHHHHHHHHHhCC----------CCCCCeEE
Confidence 345678888887665544444444321110000000 011444544 43434 99999999
Q ss_pred cccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCC---CCcE
Q 047800 325 TSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDD---NMVA 401 (547)
Q Consensus 325 ~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~---~~~~ 401 (547)
+++.+....++|||||++|+|.+++.... .+++.++..++.|++.||+||| +++|+||||||+||+++. ++.+
T Consensus 103 ~~~~~~~~~~lv~e~~~~g~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~ 178 (494)
T 3lij_A 103 DFFEDKRNYYLVMECYKGGELFDEIIHRM-KFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALI 178 (494)
T ss_dssp EEEECSSEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCE
T ss_pred EEEEeCCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcE
Confidence 99999999999999999999999887654 6899999999999999999999 999999999999999976 4569
Q ss_pred EEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhhhhccC
Q 047800 402 HLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWLP 481 (547)
Q Consensus 402 kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 481 (547)
||+|||+++...... ......||+.|+|||++. ..++.++||||+||++|+|++|++||......+.. .......
T Consensus 179 kl~DfG~a~~~~~~~-~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~-~~i~~~~-- 253 (494)
T 3lij_A 179 KIVDFGLSAVFENQK-KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEIL-RKVEKGK-- 253 (494)
T ss_dssp EECCCTTCEECBTTB-CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-HHHHHTC--
T ss_pred EEEECCCCeECCCCc-cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHhCC--
Confidence 999999998665432 233457999999999986 46999999999999999999999999764433221 1110000
Q ss_pred chhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 482 ISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
. . ........+++++.+++.+||..||++|||+.|+++.
T Consensus 254 ----------~-~---~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 254 ----------Y-T---FDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp ----------C-C---CCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred ----------C-C---CCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 0 0 0000112235568999999999999999999999865
No 176
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=2e-33 Score=276.90 Aligned_cols=194 Identities=23% Similarity=0.287 Sum_probs=150.7
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhC---CCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcE
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSG---NCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~---~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Ni 393 (547)
||||+++++++.+....++||||+++|+|.+++... ...+++..+..++.|++.||+||| +++|+||||||+||
T Consensus 79 hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NI 155 (285)
T 3is5_A 79 HPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENI 155 (285)
T ss_dssp CTTBCCEEEEEECSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGE
T ss_pred CchHHhHHHheecCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHE
Confidence 999999999999999999999999999999988642 246999999999999999999999 99999999999999
Q ss_pred Ee---CCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhh
Q 047800 394 LL---DDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEM 470 (547)
Q Consensus 394 ll---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~ 470 (547)
++ +.++.+||+|||+++...... ......||+.|+|||++. ..++.++||||+|+++|||++|+.||......+.
T Consensus 156 l~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~ 233 (285)
T 3is5_A 156 LFQDTSPHSPIKIIDFGLAELFKSDE-HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEV 233 (285)
T ss_dssp EESSSSTTCCEEECCCCCCCC-----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred EEecCCCCCCEEEEeeecceecCCcc-cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHH
Confidence 99 456789999999997654332 233457899999999985 5689999999999999999999999976433322
Q ss_pred hhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHH
Q 047800 471 TLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVT 533 (547)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~ 533 (547)
........ ... .... ...++++.+++.+||+.||++|||+.|+++
T Consensus 234 ~~~~~~~~-----------~~~-~~~~------~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 234 QQKATYKE-----------PNY-AVEC------RPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp HHHHHHCC-----------CCC-CC--------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred HhhhccCC-----------ccc-cccc------CcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11110000 000 0000 012356889999999999999999999985
No 177
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.2e-33 Score=284.56 Aligned_cols=258 Identities=18% Similarity=0.203 Sum_probs=174.6
Q ss_pred ccCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCcccc
Q 047800 245 EILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPV 323 (547)
Q Consensus 245 ~~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l 323 (547)
...+.|.++.++......+...++.+......... . ...-+..|+. +..++ ||||+++
T Consensus 31 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~-~----------~~~~~~~E~~~l~~l~----------hpnIv~l 89 (367)
T 1cm8_A 31 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSE-L----------FAKRAYRELRLLKHMR----------HENVIGL 89 (367)
T ss_dssp EEC------CEEEEEETTTCCEEEEEECSSTTSSH-H----------HHHHHHHHHHHHHHCC----------BTTBCCC
T ss_pred EEeeecCCeEEEEEEECCCCCEEEEEEeCccccCH-H----------HHHHHHHHHHHHHhCC----------CcCCCCc
Confidence 34566888888877655444445444221110000 0 0011344544 55555 9999999
Q ss_pred ccccCcc------ceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCC
Q 047800 324 ATSCSNE------EFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDD 397 (547)
Q Consensus 324 ~~~~~~~------~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~ 397 (547)
++++... ...++||||+ +++|.++++.. .+++..+..++.|++.||+||| +++|+||||||+||+++.
T Consensus 90 ~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~ 163 (367)
T 1cm8_A 90 LDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNE 163 (367)
T ss_dssp SEEECSCSSTTTCCCCEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECT
T ss_pred eeeEecCCccccCceEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcC
Confidence 9998765 3469999999 78999999874 5899999999999999999999 999999999999999999
Q ss_pred CCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhh
Q 047800 398 NMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWV 476 (547)
Q Consensus 398 ~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~ 476 (547)
++.+||+|||+++..... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||......+. +....
T Consensus 164 ~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-l~~i~ 239 (367)
T 1cm8_A 164 DCELKILDFGLARQADSE---MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQ-LKEIM 239 (367)
T ss_dssp TCCEEECCCTTCEECCSS---CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHH
T ss_pred CCCEEEEeeecccccccc---cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHH
Confidence 999999999999865432 334578999999999877 6789999999999999999999999976433221 11111
Q ss_pred hh--ccCchhhhhhh--------hhhccc--hhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 477 ND--WLPISIMEVID--------ANLLSR--EDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 477 ~~--~~~~~~~~~~~--------~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
.. ..+......+. ..+... .... ......++++.+++.+||..||++|||++|+++.
T Consensus 240 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 240 KVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFA-SILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGG-GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHH-HHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 10 00111000000 000000 0000 0011235678999999999999999999999873
No 178
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=2.7e-33 Score=291.03 Aligned_cols=250 Identities=20% Similarity=0.193 Sum_probs=170.5
Q ss_pred cCCCCccCCcchhcccCccccccCCCCCCcccc--cccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCccc
Q 047800 246 ILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHA--SWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISP 322 (547)
Q Consensus 246 ~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~ 322 (547)
..+.|.|+.++......+...++.+........ ..... .....+..|+. +..++ ||||++
T Consensus 142 ~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~-------~~~~~~~~E~~~l~~l~----------hpniv~ 204 (419)
T 3i6u_A 142 TLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREA-------DPALNVETEIEILKKLN----------HPCIIK 204 (419)
T ss_dssp EEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC---------------CCHHHHHHHHHHCC----------CTTBCC
T ss_pred EEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccc-------hhHHHHHHHHHHHHhCC----------CCCEee
Confidence 455688888887765555444544421100000 00000 00001445555 55555 999999
Q ss_pred cccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCC---C
Q 047800 323 VATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDN---M 399 (547)
Q Consensus 323 l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~---~ 399 (547)
+++++.. +..++||||+++|+|.+++.... .+++.++..++.|++.||+||| +++|+||||||+||+++.+ +
T Consensus 205 l~~~~~~-~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~ 279 (419)
T 3i6u_A 205 IKNFFDA-EDYYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDC 279 (419)
T ss_dssp CCEEEES-SEEEEEEECCTTCBGGGGTSSSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSC
T ss_pred EEEEEec-CceEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcc
Confidence 9999754 45799999999999999987654 6999999999999999999999 8999999999999999654 4
Q ss_pred cEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCC---CCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhh
Q 047800 400 VAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGRE---GRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWV 476 (547)
Q Consensus 400 ~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~ 476 (547)
.+||+|||+++...... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||..............
T Consensus 280 ~~kl~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~ 358 (419)
T 3i6u_A 280 LIKITDFGHSKILGETS-LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT 358 (419)
T ss_dssp CEEECCSSTTTSCC------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHH
T ss_pred eEEEeecccceecCCCc-cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHh
Confidence 59999999998765432 2334579999999999864 5678999999999999999999999976432221111111
Q ss_pred hhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 477 NDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
.. ..... ......+++.+.+++.+||+.||++|||++|+++.
T Consensus 359 ~~-------------~~~~~---~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 359 SG-------------KYNFI---PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp TT-------------CCCCC---HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred cC-------------CCCCC---chhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 00 00000 00011235568999999999999999999999864
No 179
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=3e-33 Score=294.08 Aligned_cols=209 Identities=18% Similarity=0.180 Sum_probs=150.5
Q ss_pred CCCccccccccCcc------ceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCC
Q 047800 317 DANISPVATSCSNE------EFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKA 390 (547)
Q Consensus 317 H~nIv~l~~~~~~~------~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp 390 (547)
|||||++++++... ...++||||+++ ++.+.+.. .+++.++..++.|++.||+||| +++|+||||||
T Consensus 120 hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~-~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp 192 (464)
T 3ttj_A 120 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKP 192 (464)
T ss_dssp CTTBCCCSEEECSCCSTTTCCEEEEEEECCSE-EHHHHHTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCG
T ss_pred CCCCCcEEEEEccCCccccCCeEEEEEeCCCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCh
Confidence 99999999998654 457999999976 67777754 4899999999999999999999 99999999999
Q ss_pred CcEEeCCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhh
Q 047800 391 NNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEM 470 (547)
Q Consensus 391 ~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~ 470 (547)
+||+++.++.+||+|||+++...... .....+||+.|+|||++.+..++.++||||+||++|||++|+.||.+....+.
T Consensus 193 ~NIll~~~~~~kl~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~ 271 (464)
T 3ttj_A 193 SNIVVKSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 271 (464)
T ss_dssp GGEEECTTSCEEECCCCCC-----CC-CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred HhEEEeCCCCEEEEEEEeeeecCCCc-ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 99999999999999999998654332 23445799999999999999999999999999999999999999976433221
Q ss_pred hhhhhhhhcc---Cc-------hhhhhhhhhhc-cch-----------hhhhhcHHHHHHHHHHHHhhhcCcCCCCCCCh
Q 047800 471 TLKHWVNDWL---PI-------SIMEVIDANLL-SRE-----------DIHFVAKEQFMSFVFNLAMECTVESPEQRINP 528 (547)
Q Consensus 471 ~~~~~~~~~~---~~-------~~~~~~~~~~~-~~~-----------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~ 528 (547)
+........ +. .....+..... ... ..........++++.+|+.+||..||++|||+
T Consensus 272 -~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta 350 (464)
T 3ttj_A 272 -WNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 350 (464)
T ss_dssp -HHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCH
T ss_pred -HHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCH
Confidence 111111000 00 00000000000 000 00001112335679999999999999999999
Q ss_pred HHHHHH
Q 047800 529 KEIVTR 534 (547)
Q Consensus 529 ~eil~~ 534 (547)
+|+++.
T Consensus 351 ~e~L~H 356 (464)
T 3ttj_A 351 DDALQH 356 (464)
T ss_dssp HHHHTS
T ss_pred HHHhcC
Confidence 999864
No 180
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=5.4e-34 Score=282.02 Aligned_cols=244 Identities=21% Similarity=0.246 Sum_probs=176.6
Q ss_pred CCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCcccccc
Q 047800 247 LRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPVAT 325 (547)
Q Consensus 247 ~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l~~ 325 (547)
.+.|.++.++......+...++.+..... ... ....+..|+. +..++ ||||+++++
T Consensus 30 lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~---~~~----------~~~~~~~e~~~l~~l~----------h~~iv~~~~ 86 (295)
T 2clq_A 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPER---DSR----------YSQPLHEEIALHKHLK----------HKNIVQYLG 86 (295)
T ss_dssp EEECSSSEEEEEEETTTCCEEEEEEEECC---CC-------------HHHHHHHHHHHTCC----------CTTBCCEEE
T ss_pred EeecCcEEEEEEEECCCCeEEEEEEccCC---chH----------HHHHHHHHHHHHHhCC----------CCCEeeEee
Confidence 44577888887765555444444421110 000 0011444444 44444 999999999
Q ss_pred ccCccceeEEEEeccCCCChhHHhhhCC--CCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCC-CCcEE
Q 047800 326 SCSNEEFKALILEYKPHGSLEKYLYSGN--CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDD-NMVAH 402 (547)
Q Consensus 326 ~~~~~~~~~lv~ey~~~gsL~~~l~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~-~~~~k 402 (547)
++...+..++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +++++|+||||+||+++. ++.+|
T Consensus 87 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~k 163 (295)
T 2clq_A 87 SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLK 163 (295)
T ss_dssp EEEETTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEE
T ss_pred EEEeCCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEE
Confidence 9999999999999999999999998753 34678899999999999999999 899999999999999987 89999
Q ss_pred EcccCCcccCCCCCcccccccCCCCCCCCCCCCCCC--CCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhhhhcc
Q 047800 403 LSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGR--VSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWL 480 (547)
Q Consensus 403 l~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 480 (547)
|+|||.++.............|++.|+|||++.+.. ++.++||||||+++|||++|+.||...............
T Consensus 164 l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~--- 240 (295)
T 2clq_A 164 ISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGM--- 240 (295)
T ss_dssp ECCTTTCEESCC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHH---
T ss_pred EeecccccccCCCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcc---
Confidence 999999986654333334457899999999987653 789999999999999999999999754322211110000
Q ss_pred CchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 481 PISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
. .... ..+..++.++.+++.+||..||++|||+.++++.
T Consensus 241 ---------~--~~~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 241 ---------F--KVHP----EIPESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp ---------H--CCCC----CCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred ---------c--cccc----cccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0 0000 0112234568999999999999999999999863
No 181
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=5.8e-34 Score=285.61 Aligned_cols=203 Identities=21% Similarity=0.388 Sum_probs=163.0
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCC---------CCCCHHHHHHHHHHHHHHHHHHHccCCCCcccc
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGN---------CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHC 386 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~---------~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~ 386 (547)
.||||+++++++.+.+..++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +++|+||
T Consensus 86 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~ 162 (322)
T 1p4o_A 86 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHR 162 (322)
T ss_dssp CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCS
T ss_pred CCCCEeeeEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccC
Confidence 39999999999999999999999999999999997521 35789999999999999999999 8999999
Q ss_pred CCCCCcEEeCCCCcEEEcccCCcccCCCCCc--ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCc
Q 047800 387 DIKANNVLLDDNMVAHLSDFGIAKTGEDQSM--TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFI-GKKPTD 463 (547)
Q Consensus 387 dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ellt-g~~p~~ 463 (547)
||||+||+++.++.+||+|||+++....... ......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||.
T Consensus 163 dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~ 242 (322)
T 1p4o_A 163 DLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 242 (322)
T ss_dssp CCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTT
T ss_pred CCccceEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccc
Confidence 9999999999999999999999975433221 1223356889999999988889999999999999999999 899987
Q ss_pred hhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHH
Q 047800 464 EIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIES 541 (547)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~ 541 (547)
........ ... ....... .+..++.++.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 243 ~~~~~~~~-~~~------------~~~~~~~-------~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~ 300 (322)
T 1p4o_A 243 GLSNEQVL-RFV------------MEGGLLD-------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300 (322)
T ss_dssp TSCHHHHH-HHH------------HTTCCCC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred cCCHHHHH-HHH------------HcCCcCC-------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence 64332211 100 0000000 0122345689999999999999999999999999876543
No 182
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=4.8e-33 Score=292.98 Aligned_cols=257 Identities=16% Similarity=0.140 Sum_probs=186.1
Q ss_pred ccCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCcccc
Q 047800 245 EILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPV 323 (547)
Q Consensus 245 ~~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l 323 (547)
...+.|.|+.++......+...+++|..... ..... +..|+. +..++ +|++|..+
T Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~---~~~~~------------~~~E~~il~~L~---------~~~~i~~i 68 (483)
T 3sv0_A 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVK---TKHPQ------------LLYESKIYRILQ---------GGTGIPNV 68 (483)
T ss_dssp CCCEECSSCEEEEEEETTTCCEEEEEEEETT---CSSCC------------HHHHHHHHHHTT---------TSTTCCCE
T ss_pred EEEeeCCCEEEEEEEECCCCcEEEEEEeccc---cccHH------------HHHHHHHHHHhc---------CCCCCCeE
Confidence 3445588999988765544444555421100 00000 344444 44444 24666666
Q ss_pred ccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe---CCCCc
Q 047800 324 ATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL---DDNMV 400 (547)
Q Consensus 324 ~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill---~~~~~ 400 (547)
..++......++||||+ +++|.+++......+++.+++.++.||+.||+||| +++|+||||||+|||+ +.++.
T Consensus 69 ~~~~~~~~~~~lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~ 144 (483)
T 3sv0_A 69 RWFGVEGDYNVLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQ 144 (483)
T ss_dssp EEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTC
T ss_pred EEEEeeCCEEEEEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCe
Confidence 67777778899999999 88999999876667999999999999999999999 9999999999999999 58899
Q ss_pred EEEcccCCcccCCCCCc-------ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhh
Q 047800 401 AHLSDFGIAKTGEDQSM-------TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLK 473 (547)
Q Consensus 401 ~kl~Dfg~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~ 473 (547)
+||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..........
T Consensus 145 vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~- 223 (483)
T 3sv0_A 145 VYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQ- 223 (483)
T ss_dssp EEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHH-
T ss_pred EEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHH-
Confidence 99999999986543321 1224579999999999999999999999999999999999999997643221100
Q ss_pred hhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHHH
Q 047800 474 HWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESL 542 (547)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~~ 542 (547)
.+ ..+......... ......++.++.+++..||..||++||++.++++.|+.+.+..
T Consensus 224 -~~--------~~i~~~~~~~~~---~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~ 280 (483)
T 3sv0_A 224 -KY--------EKISEKKVATSI---EALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE 280 (483)
T ss_dssp -HH--------HHHHHHHHHSCH---HHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred -HH--------HHHhhccccccH---HHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence 00 011111000000 0001223567999999999999999999999999999987653
No 183
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=3.6e-34 Score=291.91 Aligned_cols=212 Identities=21% Similarity=0.309 Sum_probs=160.1
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCC-CccccCCCCCcEE
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSA-PVIHCDIKANNVL 394 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~-~i~H~dlkp~Nil 394 (547)
.||||+++++++..++..++||||+++|+|.+++.... .+++..+..++.|++.||+||| ++ +|+||||||+||+
T Consensus 89 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil 164 (360)
T 3eqc_A 89 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNIL 164 (360)
T ss_dssp CCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEE
T ss_pred CCCCEEEEeEEEEECCEEEEEEECCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HhCCEEcCCccHHHEE
Confidence 49999999999999999999999999999999998754 6899999999999999999999 75 8999999999999
Q ss_pred eCCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhh
Q 047800 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKH 474 (547)
Q Consensus 395 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~ 474 (547)
++.++.+||+|||++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||......+.....
T Consensus 165 ~~~~~~~kl~Dfg~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~ 242 (360)
T 3eqc_A 165 VNSRGEIKLCDFGVSGQLIDS--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMF 242 (360)
T ss_dssp ECTTCCEEECCCCCCHHHHHH--C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHH
T ss_pred ECCCCCEEEEECCCCcccccc--cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHh
Confidence 999999999999998644222 123347899999999999999999999999999999999999999764433221110
Q ss_pred hh--h-----------------------hccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChH
Q 047800 475 WV--N-----------------------DWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPK 529 (547)
Q Consensus 475 ~~--~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ 529 (547)
.. . ...+....+..+....... .......++.++.+++.+||+.||++|||++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 320 (360)
T 3eqc_A 243 GCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPP--PKLPSGVFSLEFQDFVNKCLIKNPAERADLK 320 (360)
T ss_dssp C------------------------------CCCHHHHHHHHHHSCC--CCCCTTTSCHHHHHHHHHHHCSSTTTSCCHH
T ss_pred cccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCC--CCCCcccccHHHHHHHHHHhhcChhhCCCHH
Confidence 00 0 0000011111111110000 0011122356799999999999999999999
Q ss_pred HHHHHH
Q 047800 530 EIVTRL 535 (547)
Q Consensus 530 eil~~L 535 (547)
|+++.-
T Consensus 321 ell~hp 326 (360)
T 3eqc_A 321 QLMVHA 326 (360)
T ss_dssp HHHTSH
T ss_pred HHhhCh
Confidence 998753
No 184
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.7e-35 Score=293.96 Aligned_cols=217 Identities=18% Similarity=0.279 Sum_probs=149.8
Q ss_pred CCCCCccccccccCccc----eeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccC-----CCCccc
Q 047800 315 SNDANISPVATSCSNEE----FKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGY-----SAPVIH 385 (547)
Q Consensus 315 ~~H~nIv~l~~~~~~~~----~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-----~~~i~H 385 (547)
..||||+++++++.... ..++||||+++|+|.++++.. .+++.+++.++.|++.||+|||... +++|+|
T Consensus 54 ~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH 131 (303)
T 3gxj_A 54 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAH 131 (303)
T ss_dssp CCC-CBCCEEEEEEEECSSSEEEEEEEECCTTCCHHHHHHHC--CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCC
T ss_pred ccCcceeeeeeecccCCCccceeEEEEeccCCCCHHHHHhcc--CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEee
Confidence 45999999999998776 789999999999999999875 4888899999999999999999321 579999
Q ss_pred cCCCCCcEEeCCCCcEEEcccCCcccCCCCCcc----cccccCCCCCCCCCCCCCC------CCCcchhHHHHHHHHHHH
Q 047800 386 CDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMT----QTQTLATIGYMAPEYGREG------RVSANGDVYSFGIMLMKT 455 (547)
Q Consensus 386 ~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~sDv~s~G~il~el 455 (547)
|||||+||+++.++.+||+|||+++........ .....||+.|+|||++.+. .++.++|||||||++|||
T Consensus 132 ~Dlkp~Nil~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el 211 (303)
T 3gxj_A 132 RDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211 (303)
T ss_dssp SCCCGGGC-CCTTCCC-BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CT
T ss_pred CcCCHHHeEECCCCCEEEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHH
Confidence 999999999999999999999999754432221 2233699999999999876 344689999999999999
Q ss_pred HhC----------CCCCchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCC
Q 047800 456 FIG----------KKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQR 525 (547)
Q Consensus 456 ltg----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 525 (547)
++| ..||............ ....+............ .....+...+.+++.+||+.||++|
T Consensus 212 ~~g~~~~~~~~~~~~p~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~R 282 (303)
T 3gxj_A 212 ARRCSIGGIHEDYQLPYYDLVPSDPSVEE--------MRKVVCEQKLRPNIPNR-WQSCEALRVMAKIMRECWYANGAAR 282 (303)
T ss_dssp GGGBCBTTBC-CCCCTTTTTCC-CCCCC---------CHHHHTTSCCCCCCCGG-GGSSHHHHHHHHHHHTTCCSSGGGS
T ss_pred HhcCCCccccceeeccccccCCCCccHHH--------HHHHHHHhhcCCCcccc-ccchhhHHHHHHHHHHHhccCcccC
Confidence 999 5555432221111110 01111111111111111 1123456779999999999999999
Q ss_pred CChHHHHHHHHHHHHHH
Q 047800 526 INPKEIVTRLLKIIESL 542 (547)
Q Consensus 526 ps~~eil~~L~~i~~~~ 542 (547)
||+.++++.|+++.++.
T Consensus 283 ps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 283 LTALRIKKTLSQLSQQE 299 (303)
T ss_dssp CCHHHHHHHHHC-CCC-
T ss_pred CCHHHHHHHHHHhhhhc
Confidence 99999999999886654
No 185
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.2e-32 Score=305.78 Aligned_cols=241 Identities=32% Similarity=0.492 Sum_probs=169.9
Q ss_pred CCcccCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCcc
Q 047800 2 IPPEIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNT 81 (547)
Q Consensus 2 ip~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 81 (547)
+|..|+++++|+.|+|++|++++..|..|.++++|++|+|++|+++ +.+|..+..+++|++|+|++|++++..|..
T Consensus 410 ~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~----~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 485 (768)
T 3rgz_A 410 IPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLE----GEIPQELMYVKTLETLILDFNDLTGEIPSG 485 (768)
T ss_dssp CCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCC----SCCCGGGGGCTTCCEEECCSSCCCSCCCGG
T ss_pred cCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCccc----CcCCHHHcCCCCceEEEecCCcccCcCCHH
Confidence 3555555666666666666666556666666666666666666655 455655656666666666666666555666
Q ss_pred ccCCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccC
Q 047800 82 FGNLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSS 161 (547)
Q Consensus 82 ~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~ 161 (547)
|.++++|++|+|++|++++..+. +|..+++|++|+|++|++++..+.. +.+++ +|+.|++++
T Consensus 486 l~~l~~L~~L~L~~N~l~~~~p~-----~~~~l~~L~~L~L~~N~l~~~~p~~-l~~l~------------~L~~L~Ls~ 547 (768)
T 3rgz_A 486 LSNCTNLNWISLSNNRLTGEIPK-----WIGRLENLAILKLSNNSFSGNIPAE-LGDCR------------SLIWLDLNT 547 (768)
T ss_dssp GGGCTTCCEEECCSSCCCSCCCG-----GGGGCTTCCEEECCSSCCEEECCGG-GGGCT------------TCCEEECCS
T ss_pred HhcCCCCCEEEccCCccCCcCCh-----HHhcCCCCCEEECCCCcccCcCCHH-HcCCC------------CCCEEECCC
Confidence 66666666666666666655554 5555666666666666665555544 33333 788888888
Q ss_pred CcCCCCCCcC----------------------------------------------------------------------
Q 047800 162 NFLTGPLPLE---------------------------------------------------------------------- 171 (547)
Q Consensus 162 N~l~~~~p~~---------------------------------------------------------------------- 171 (547)
|.++|.+|..
T Consensus 548 N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~ 627 (768)
T 3rgz_A 548 NLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPT 627 (768)
T ss_dssp SEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCS
T ss_pred CccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchh
Confidence 8777666543
Q ss_pred CCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCCccccccCCC-C
Q 047800 172 IGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKLEGEILRG-G 250 (547)
Q Consensus 172 ~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~ 250 (547)
+.++++|+.|||++|.+ +|.+|+.|+.+++|+.|+|++|+++|.+|..|+.+++|+.|||++|+++|.+|.. .
T Consensus 628 ~~~l~~L~~LdLs~N~l------~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~ 701 (768)
T 3rgz_A 628 FDNNGSMMFLDMSYNML------SGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMS 701 (768)
T ss_dssp CSSSBCCCEEECCSSCC------BSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGG
T ss_pred hhccccccEEECcCCcc------cccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHh
Confidence 33456677777777777 7899999999999999999999999999999999999999999999999988876 7
Q ss_pred ccCCcchhcccCccccccCC
Q 047800 251 SFGNFLVELFEGNKLLYGSP 270 (547)
Q Consensus 251 ~~~~l~~l~l~~N~~~c~~~ 270 (547)
.+..+..+++++|++...+|
T Consensus 702 ~l~~L~~L~ls~N~l~g~iP 721 (768)
T 3rgz_A 702 ALTMLTEIDLSNNNLSGPIP 721 (768)
T ss_dssp GCCCCSEEECCSSEEEEECC
T ss_pred CCCCCCEEECcCCcccccCC
Confidence 78889999999999876655
No 186
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=2.2e-33 Score=275.48 Aligned_cols=193 Identities=25% Similarity=0.317 Sum_probs=156.7
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
.||||+++++++.+....++||||+++|+|.+++.... .+++..+..++.|++.||+||| +++|+|+||||+||++
T Consensus 67 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili 142 (279)
T 3fdn_A 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLL 142 (279)
T ss_dssp CCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEE
T ss_pred CCCCCcchhheEecCCEEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEE
Confidence 49999999999999999999999999999999998754 6899999999999999999999 9999999999999999
Q ss_pred CCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhh
Q 047800 396 DDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHW 475 (547)
Q Consensus 396 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~ 475 (547)
+.++.+||+|||++....... .....|++.|+|||.+.+..++.++||||+|+++|||++|+.||......+.. ...
T Consensus 143 ~~~~~~~l~Dfg~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~~ 219 (279)
T 3fdn_A 143 GSAGELKIADFGWSVHAPSSR--RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY-KRI 219 (279)
T ss_dssp CTTSCEEECSCCEESCC----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHH-HHH
T ss_pred cCCCCEEEEeccccccCCccc--ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHH-HHH
Confidence 999999999999886543322 23447899999999999988999999999999999999999999764322211 000
Q ss_pred hhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHH
Q 047800 476 VNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRL 535 (547)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L 535 (547)
.... ...+..+++++.+++.+||+.||++|||+.|+++.-
T Consensus 220 -------------~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~ 259 (279)
T 3fdn_A 220 -------------SRVE-------FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP 259 (279)
T ss_dssp -------------HHTC-------CCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCH
T ss_pred -------------HhCC-------CCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 0000 001112345688999999999999999999999753
No 187
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=8.7e-34 Score=301.55 Aligned_cols=197 Identities=20% Similarity=0.252 Sum_probs=159.1
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhC---CCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcE
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSG---NCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~---~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Ni 393 (547)
||||+++++++.+....++||||+++|+|.+++... ...+++..++.++.||+.||+||| +++|+||||||+||
T Consensus 244 hp~Iv~l~~~~~~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NI 320 (543)
T 3c4z_A 244 SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENV 320 (543)
T ss_dssp CTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGE
T ss_pred CCCEeeEEEEEeeCCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHE
Confidence 999999999999999999999999999999999764 246999999999999999999999 99999999999999
Q ss_pred EeCCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhh
Q 047800 394 LLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLK 473 (547)
Q Consensus 394 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~ 473 (547)
+++.++.+||+|||+++.............||+.|+|||++.+..++.++||||+||++|||++|+.||........ ..
T Consensus 321 Ll~~~g~vkL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~-~~ 399 (543)
T 3c4z_A 321 LLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE-NK 399 (543)
T ss_dssp EECTTSCEEECCCTTCEECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCC-HH
T ss_pred EEeCCCCEEEeecceeeeccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchh-HH
Confidence 99999999999999998765443333445899999999999998999999999999999999999999976422110 00
Q ss_pred hhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCCh-----HHHHH
Q 047800 474 HWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINP-----KEIVT 533 (547)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~-----~eil~ 533 (547)
.+.. .+..... ..+..++.++.+++.+||..||++||++ +++++
T Consensus 400 ~~~~--------~i~~~~~--------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 400 ELKQ--------RVLEQAV--------TYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp HHHH--------HHHHCCC--------CCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred HHHH--------HHhhccc--------CCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 0000 0111100 0112335678999999999999999975 55553
No 188
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=3.8e-33 Score=274.29 Aligned_cols=196 Identities=22% Similarity=0.252 Sum_probs=156.2
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~ 396 (547)
||||+++++++.+....++||||+++++|.+++.... .+++.++..++.|++.||+||| +++++|+||||+||+++
T Consensus 67 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~ 142 (283)
T 3bhy_A 67 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLL 142 (283)
T ss_dssp CTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEES
T ss_pred CCCeeehhheecCCCeEEEEEeecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEe
Confidence 9999999999999999999999999999999997643 6899999999999999999999 99999999999999998
Q ss_pred CCC----cEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhh
Q 047800 397 DNM----VAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTL 472 (547)
Q Consensus 397 ~~~----~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~ 472 (547)
.++ .+||+|||.+........ .....|++.|+|||++.+..++.++||||+|+++|||++|+.||......+. .
T Consensus 143 ~~~~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~ 220 (283)
T 3bhy_A 143 DKNVPNPRIKLIDFGIAHKIEAGNE-FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQET-L 220 (283)
T ss_dssp CSSSSSCCEEECCCTTCEECC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-H
T ss_pred cCCCCCCceEEEecccceeccCCCc-ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHH-H
Confidence 877 899999999976543322 2334689999999999988999999999999999999999999976433221 1
Q ss_pred hhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 473 KHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
..+.... ..... .....++..+.+++.+||..||++|||+.++++.
T Consensus 221 ~~~~~~~------------~~~~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 221 TNISAVN------------YDFDE----EYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp HHHHTTC------------CCCCH----HHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred HHhHhcc------------cCCcc----hhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 1110000 00000 0011224568999999999999999999999974
No 189
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=3e-34 Score=307.27 Aligned_cols=246 Identities=23% Similarity=0.358 Sum_probs=183.2
Q ss_pred cCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCccccc
Q 047800 246 ILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPVA 324 (547)
Q Consensus 246 ~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l~ 324 (547)
..+.|.|+.++.....+.. .++++....... ....+..|+. +..++ ||||++++
T Consensus 274 ~lG~G~fg~Vy~~~~~~~~-~vavK~~~~~~~--------------~~~~~~~E~~~l~~l~----------hpniv~~~ 328 (535)
T 2h8h_A 274 KLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTM--------------SPEAFLQEAQVMKKLR----------HEKLVQLY 328 (535)
T ss_dssp EEEECSSEEEEEEEETTTE-EEEEEEECTTSS--------------CHHHHHHHHHHHHHCC----------CTTBCCEE
T ss_pred ecccCCCeEEEEEEECCCc-eEEEEEeCCCCC--------------CHHHHHHHHHHHHhCC----------CCCEeeEE
Confidence 3455788888877655432 233331111000 0112556666 66666 99999999
Q ss_pred cccCccceeEEEEeccCCCChhHHhhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCCcEEE
Q 047800 325 TSCSNEEFKALILEYKPHGSLEKYLYSG-NCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHL 403 (547)
Q Consensus 325 ~~~~~~~~~~lv~ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~~~kl 403 (547)
+++.+ +..++||||+++|+|.++++.. ...+++.+++.++.|++.||+||| +++|+||||||+|||++.++.+||
T Consensus 329 ~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl 404 (535)
T 2h8h_A 329 AVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKV 404 (535)
T ss_dssp EEECS-SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEee-ccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEE
Confidence 99877 6689999999999999999753 235899999999999999999999 999999999999999999999999
Q ss_pred cccCCcccCCCCCc-ccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCchhhhhhhhhhhhhhhccC
Q 047800 404 SDFGIAKTGEDQSM-TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFI-GKKPTDEIFNEEMTLKHWVNDWLP 481 (547)
Q Consensus 404 ~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 481 (547)
+|||+++....... ......++..|+|||++.+..++.++|||||||++|||++ |+.||......+.. ..
T Consensus 405 ~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~-~~------- 476 (535)
T 2h8h_A 405 ADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-DQ------- 476 (535)
T ss_dssp CCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHH-HH-------
T ss_pred cccccceecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH-HH-------
Confidence 99999986543211 1222356788999999998899999999999999999999 99999764332211 10
Q ss_pred chhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHH
Q 047800 482 ISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIE 540 (547)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~ 540 (547)
+.... +...+..++.++.++|.+||+.||++|||++++++.|+.+..
T Consensus 477 ------i~~~~------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 523 (535)
T 2h8h_A 477 ------VERGY------RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 523 (535)
T ss_dssp ------HHTTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred ------HHcCC------CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence 00000 011112345678999999999999999999999999987643
No 190
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=8.1e-34 Score=285.39 Aligned_cols=198 Identities=18% Similarity=0.227 Sum_probs=156.4
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEE
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSG-NCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nil 394 (547)
.||||+++++++.+.+..++||||+++|+|.+++... ...+++.+++.++.|++.||+||| +++|+||||||+||+
T Consensus 87 ~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl 163 (327)
T 3lm5_A 87 SCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNIL 163 (327)
T ss_dssp TCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEE
T ss_pred CCCCEEEEEEEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEE
Confidence 3899999999999999999999999999999998653 356999999999999999999999 999999999999999
Q ss_pred eCC---CCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhh
Q 047800 395 LDD---NMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMT 471 (547)
Q Consensus 395 l~~---~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~ 471 (547)
++. ++.+||+|||+++....... .....||+.|+|||++.+..++.++||||+|+++|||++|+.||......+..
T Consensus 164 ~~~~~~~~~~kL~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~ 242 (327)
T 3lm5_A 164 LSSIYPLGDIKIVDFGMSRKIGHACE-LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETY 242 (327)
T ss_dssp ESCBTTBCCEEECCGGGCEEC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred EecCCCCCcEEEeeCccccccCCccc-cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHH
Confidence 987 78999999999986543322 23357999999999999999999999999999999999999999764433221
Q ss_pred hhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 472 LKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
... ... ... ........++..+.+++.+||+.||++|||++++++.
T Consensus 243 ~~i-~~~------------~~~----~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 243 LNI-SQV------------NVD----YSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp HHH-HHT------------CCC----CCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred HHH-Hhc------------ccc----cCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 110 000 000 0000011234568999999999999999999999753
No 191
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.4e-33 Score=281.82 Aligned_cols=215 Identities=23% Similarity=0.348 Sum_probs=166.6
Q ss_pred CCCccccccccCcc--ceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEE
Q 047800 317 DANISPVATSCSNE--EFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394 (547)
Q Consensus 317 H~nIv~l~~~~~~~--~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nil 394 (547)
||||+++++++... ...++||||+++|+|.+++......+++.+++.++.|++.||+||| +++|+|+||||+||+
T Consensus 101 h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIl 177 (326)
T 2w1i_A 101 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNIL 177 (326)
T ss_dssp CTTBCCEEEEECC----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEE
T ss_pred CCCeeeEEEEEEecCCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEE
Confidence 99999999988765 3789999999999999999887667999999999999999999999 899999999999999
Q ss_pred eCCCCcEEEcccCCcccCCCCCcc---cccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhh
Q 047800 395 LDDNMVAHLSDFGIAKTGEDQSMT---QTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMT 471 (547)
Q Consensus 395 l~~~~~~kl~Dfg~a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~ 471 (547)
++.++.+||+|||+++........ .....++..|+|||++.+..++.++||||+|+++|||++|..||........
T Consensus 178 i~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~- 256 (326)
T 2w1i_A 178 VENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFM- 256 (326)
T ss_dssp EEETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHH-
T ss_pred EcCCCcEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHH-
Confidence 999999999999999865443221 2223567789999999888899999999999999999999999865321111
Q ss_pred hhhhhhhccC-c----hhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHHHH
Q 047800 472 LKHWVNDWLP-I----SIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESLL 543 (547)
Q Consensus 472 ~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~~~ 543 (547)
........ . .+.+.+.... ....+..++.++.+++.+||+.||++|||+.|++++|+.+.+++.
T Consensus 257 --~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l~ 325 (326)
T 2w1i_A 257 --RMIGNDKQGQMIVFHLIELLKNNG------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA 325 (326)
T ss_dssp --HHHCTTCCTHHHHHHHHHHHHTTC------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred --HhhccccchhhhHHHHHHHhhcCC------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence 00000000 0 1111111110 011122345679999999999999999999999999999988763
No 192
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=7e-34 Score=301.43 Aligned_cols=196 Identities=20% Similarity=0.285 Sum_probs=158.6
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
.||||+++++++.+.+..++||||+++|+|.+++.... .+++.++..++.|++.||+||| +++|+||||||+||++
T Consensus 84 ~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~ 159 (484)
T 3nyv_A 84 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLL 159 (484)
T ss_dssp CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCS-CCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEE
T ss_pred CCCCCCcEEEEEEeCCEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEE
Confidence 39999999999999999999999999999999998754 6999999999999999999999 9999999999999999
Q ss_pred ---CCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhh
Q 047800 396 ---DDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTL 472 (547)
Q Consensus 396 ---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~ 472 (547)
+.++.+||+|||+++...... ......||+.|+|||++.+ .++.++||||+||++|+|++|++||......+. .
T Consensus 160 ~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~ 236 (484)
T 3nyv_A 160 ESKSKDANIRIIDFGLSTHFEASK-KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDI-L 236 (484)
T ss_dssp SSSSTTCCEEECCTTHHHHBCCCC-SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-H
T ss_pred ecCCCCCcEEEEeeeeeEEccccc-ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHH-H
Confidence 567899999999997654332 2234479999999999865 699999999999999999999999976433221 1
Q ss_pred hhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 473 KHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
...... .. ....+....+++++.+++.+||..||++|||+.|+++.
T Consensus 237 ~~i~~~------------~~----~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 237 KKVEKG------------KY----TFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp HHHHHC------------CC----CCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHcC------------CC----CCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 111100 00 00001112235678999999999999999999999864
No 193
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=8.3e-33 Score=280.77 Aligned_cols=265 Identities=17% Similarity=0.196 Sum_probs=180.4
Q ss_pred ccCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCcccc
Q 047800 245 EILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPV 323 (547)
Q Consensus 245 ~~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l 323 (547)
...+.|.++.++......+...++.+........... ...+..|+. +..++ ||||+++
T Consensus 23 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~-----------~~~~~~E~~~l~~l~----------h~~iv~~ 81 (351)
T 3mi9_A 23 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGF-----------PITALREIKILQLLK----------HENVVNL 81 (351)
T ss_dssp EECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSS-----------CHHHHHHHHHHHHCC----------CTTBCCE
T ss_pred EEEecCCCcEEEEEEECCCCCEEEEEEEecccccccc-----------hHHHHHHHHHHHhcc----------CCCcccH
Confidence 3456688999988776555444555421111100000 011344555 55555 9999999
Q ss_pred ccccCc--------cceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 324 ATSCSN--------EEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 324 ~~~~~~--------~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
++++.. .+..++||||+++ ++.+.+......+++.++..++.|++.||+||| +++|+||||||+||++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~ 157 (351)
T 3mi9_A 82 IEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLI 157 (351)
T ss_dssp EEEEEEC--------CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEE
T ss_pred hheeeccccccccCCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEE
Confidence 999876 3568999999975 888888776667999999999999999999999 9999999999999999
Q ss_pred CCCCcEEEcccCCcccCCCC----CcccccccCCCCCCCCCCCCCC-CCCcchhHHHHHHHHHHHHhCCCCCchhhhhhh
Q 047800 396 DDNMVAHLSDFGIAKTGEDQ----SMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEM 470 (547)
Q Consensus 396 ~~~~~~kl~Dfg~a~~~~~~----~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~ 470 (547)
+.++.+||+|||+++..... ........||+.|+|||++.+. .++.++||||+||++|||++|+.||........
T Consensus 158 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~ 237 (351)
T 3mi9_A 158 TRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQ 237 (351)
T ss_dssp CTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred cCCCCEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence 99999999999999765421 1122345789999999998764 579999999999999999999999987543322
Q ss_pred hh--hhhhhhccCchhhhh-----hhhhhccc---hhh-hhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 471 TL--KHWVNDWLPISIMEV-----IDANLLSR---EDI-HFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 471 ~~--~~~~~~~~~~~~~~~-----~~~~~~~~---~~~-~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
.. ........+...... .+...... ... ........++++.+++.+||+.||++|||++|+++.
T Consensus 238 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 238 LALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp HHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 11 111111111100000 00000000 000 000001114568899999999999999999999863
No 194
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.8e-33 Score=281.14 Aligned_cols=260 Identities=20% Similarity=0.235 Sum_probs=168.5
Q ss_pred CeEeCCCCccc-cccCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhc
Q 047800 233 DDLDLSFNKLE-GEILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKR 310 (547)
Q Consensus 233 ~~l~l~~N~l~-~~~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 310 (547)
+.+++..+++. ....+.|.++.++......+...++.+.... .. ......+..|+. +..++
T Consensus 21 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~----------~~~~~~~~~e~~~l~~l~---- 83 (337)
T 3ll6_A 21 QTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLS---NE----------EEKNRAIIQEVCFMKKLS---- 83 (337)
T ss_dssp CEEEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEE---SS----------HHHHHHHHHHHHHHHHHT----
T ss_pred ceeeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecC---Cc----------hHHHHHHHHHHHHHHHhc----
Confidence 34455555444 2345567888888776544444444431100 00 000011334443 33332
Q ss_pred CCCCCCCCCcccccccc--------CccceeEEEEeccCCCChhHHhhh--CCCCCCHHHHHHHHHHHHHHHHHHHccCC
Q 047800 311 GKRPSNDANISPVATSC--------SNEEFKALILEYKPHGSLEKYLYS--GNCSLDIFQRLNSMIDVALALEYMHFGYS 380 (547)
Q Consensus 311 ~~~~~~H~nIv~l~~~~--------~~~~~~~lv~ey~~~gsL~~~l~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~ 380 (547)
+||||+++++++ ......++||||+. |+|.+++.. ....+++.+++.++.|++.||+||| +
T Consensus 84 -----~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~ 154 (337)
T 3ll6_A 84 -----GHPNIVQFCSAASIGKEESDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH---R 154 (337)
T ss_dssp -----TSTTBCCEEEEEEECTTTSTTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH---T
T ss_pred -----cCCChhhccccccccccccccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---h
Confidence 399999999988 34466899999995 699998865 3346999999999999999999999 8
Q ss_pred CC--ccccCCCCCcEEeCCCCcEEEcccCCcccCCCCCcc------------cccccCCCCCCCCCCC---CCCCCCcch
Q 047800 381 AP--VIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMT------------QTQTLATIGYMAPEYG---REGRVSANG 443 (547)
Q Consensus 381 ~~--i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~------------~~~~~gt~~y~aPE~~---~~~~~~~~s 443 (547)
.+ |+||||||+||+++.++.+||+|||+++........ .....||+.|+|||++ .+..++.++
T Consensus 155 ~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~ 234 (337)
T 3ll6_A 155 QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQ 234 (337)
T ss_dssp SSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHH
T ss_pred CCCCEEEccCCcccEEECCCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHH
Confidence 88 999999999999999999999999999865432211 1133589999999998 566789999
Q ss_pred hHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCC
Q 047800 444 DVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPE 523 (547)
Q Consensus 444 Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 523 (547)
||||||+++|||++|+.||......... ........ ....+..+.+++.+||+.||+
T Consensus 235 Dv~slG~il~el~~g~~p~~~~~~~~~~-----------------~~~~~~~~------~~~~~~~~~~li~~~l~~~p~ 291 (337)
T 3ll6_A 235 DIWALGCILYLLCFRQHPFEDGAKLRIV-----------------NGKYSIPP------HDTQYTVFHSLIRAMLQVNPE 291 (337)
T ss_dssp HHHHHHHHHHHHHHSSCCC-----------------------------CCCCT------TCCSSGGGHHHHHHHSCSSGG
T ss_pred hHHHHHHHHHHHHhCCCCCcchhHHHhh-----------------cCcccCCc------ccccchHHHHHHHHHccCChh
Confidence 9999999999999999999653221110 00000000 011123478899999999999
Q ss_pred CCCChHHHHHHHHHHHHH
Q 047800 524 QRINPKEIVTRLLKIIES 541 (547)
Q Consensus 524 ~Rps~~eil~~L~~i~~~ 541 (547)
+|||+.|+++.|+.+.+.
T Consensus 292 ~Rps~~e~l~~l~~~~~~ 309 (337)
T 3ll6_A 292 ERLSIAEVVHQLQEIAAA 309 (337)
T ss_dssp GSCCHHHHHHHHHHHHHH
T ss_pred hCcCHHHHHHHHHHHHhc
Confidence 999999999999998765
No 195
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=2.7e-33 Score=298.20 Aligned_cols=195 Identities=19% Similarity=0.288 Sum_probs=158.0
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~ 396 (547)
||||+++++++.++...++|||||++|+|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||+++
T Consensus 105 hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~ 180 (504)
T 3q5i_A 105 HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLE 180 (504)
T ss_dssp CTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEES
T ss_pred CCCCCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEe
Confidence 9999999999999999999999999999999987654 6999999999999999999999 99999999999999998
Q ss_pred CCC---cEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhh
Q 047800 397 DNM---VAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLK 473 (547)
Q Consensus 397 ~~~---~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~ 473 (547)
.++ .+||+|||+++...... ......||+.|+|||++. ..++.++||||+||++|+|++|..||......+.. .
T Consensus 181 ~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~-~ 257 (504)
T 3q5i_A 181 NKNSLLNIKIVDFGLSSFFSKDY-KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDII-K 257 (504)
T ss_dssp STTCCSSEEECCCTTCEECCTTS-CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-H
T ss_pred cCCCCccEEEEECCCCEEcCCCC-ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHH-H
Confidence 775 69999999998665432 233457999999999987 46899999999999999999999999764332211 1
Q ss_pred hhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 474 HWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
.... . ...........+++++.+++.+||..||.+|||+.|+++.
T Consensus 258 ~i~~------------~----~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 258 KVEK------------G----KYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp HHHH------------C----CCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHc------------C----CCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 1100 0 0000001112235678999999999999999999999864
No 196
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=3.2e-33 Score=291.35 Aligned_cols=197 Identities=17% Similarity=0.192 Sum_probs=152.9
Q ss_pred cCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCccccc
Q 047800 246 ILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPVA 324 (547)
Q Consensus 246 ~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l~ 324 (547)
..+.|.|+.++......+...+++|...... . ....+..|+. +..++ .....+|+||++++
T Consensus 104 ~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~----~----------~~~~~~~E~~~l~~l~----~~~~~~~~~iv~~~ 165 (429)
T 3kvw_A 104 VIGKGSFGQVVKAYDHKVHQHVALKMVRNEK----R----------FHRQAAEEIRILEHLR----KQDKDNTMNVIHML 165 (429)
T ss_dssp EEEESSSEEEEEEEETTTTEEEEEEEECSCH----H----------HHHHHHHHHHHHHHHH----TTCTTSCSCBCCEE
T ss_pred EcccCccEEEEEEEECCCCcEEEEEEECCcc----c----------hHHHHHHHHHHHHHHh----hccccCCcCEEEEE
Confidence 4455888888876555444444444211100 0 0011333443 33333 33445799999999
Q ss_pred cccCccceeEEEEeccCCCChhHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCCc--E
Q 047800 325 TSCSNEEFKALILEYKPHGSLEKYLYSGN-CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMV--A 401 (547)
Q Consensus 325 ~~~~~~~~~~lv~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~~--~ 401 (547)
+++......++||||+. |+|.+++.... ..+++..+..++.|++.||+||| +++|+||||||+|||++.++. +
T Consensus 166 ~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~v 241 (429)
T 3kvw_A 166 ENFTFRNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGI 241 (429)
T ss_dssp EEEEETTEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCE
T ss_pred eecccCCeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcce
Confidence 99999999999999996 59999998754 45999999999999999999999 899999999999999999887 9
Q ss_pred EEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhh
Q 047800 402 HLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFN 467 (547)
Q Consensus 402 kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~ 467 (547)
||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|++||.....
T Consensus 242 kL~DFG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~ 304 (429)
T 3kvw_A 242 KVIDFGSSCYEHQR---VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE 304 (429)
T ss_dssp EECCCTTCEETTCC---CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred EEeecccceecCCc---ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCH
Confidence 99999999764432 2334789999999999999999999999999999999999999977543
No 197
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=7.3e-34 Score=282.07 Aligned_cols=207 Identities=22% Similarity=0.281 Sum_probs=155.9
Q ss_pred CCCCCCccccccccCccceeEEEEeccCCCChhHHhhh-------CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCcccc
Q 047800 314 PSNDANISPVATSCSNEEFKALILEYKPHGSLEKYLYS-------GNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHC 386 (547)
Q Consensus 314 ~~~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~-------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~ 386 (547)
...||||+++++++...+..++||||+++|+|.+++.. ....+++..+..++.|++.||+||| +++++|+
T Consensus 69 ~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~ 145 (303)
T 2vwi_A 69 QCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHR 145 (303)
T ss_dssp CCCCTTBCCEEEEEESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCC
T ss_pred hcCCCCEeeEEEEEeecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCC
Confidence 44699999999999999999999999999999999974 2346899999999999999999999 8999999
Q ss_pred CCCCCcEEeCCCCcEEEcccCCcccCCCCC-----cccccccCCCCCCCCCCCCC-CCCCcchhHHHHHHHHHHHHhCCC
Q 047800 387 DIKANNVLLDDNMVAHLSDFGIAKTGEDQS-----MTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMKTFIGKK 460 (547)
Q Consensus 387 dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~-----~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~s~G~il~elltg~~ 460 (547)
||||+||+++.++.+||+|||.+....... .......||+.|+|||++.+ ..++.++||||+|+++|||++|+.
T Consensus 146 dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~ 225 (303)
T 2vwi_A 146 DVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAA 225 (303)
T ss_dssp CCSGGGEEECTTCCEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred CCChhhEEEcCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCC
Confidence 999999999999999999999987543221 11223468999999999876 468999999999999999999999
Q ss_pred CCchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 461 PTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 461 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
||............. ....+.......+.. ....++.++.+++.+||+.||++|||+.|+++.
T Consensus 226 pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 226 PYHKYPPMKVLMLTL-QNDPPSLETGVQDKE----------MLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp TTTTSCGGGHHHHHH-TSSCCCTTC-----C----------CCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred CCccCchhhHHHHHh-ccCCCccccccccch----------hhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 997643322211111 100000000000000 001224568999999999999999999999863
No 198
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.3e-33 Score=278.61 Aligned_cols=197 Identities=22% Similarity=0.253 Sum_probs=148.0
Q ss_pred CCCCCccccccccCccceeEEEEeccCCCChhHHhhh---CCCCCCHHHHHHHHHHHHHHHHHHHccCCC-CccccCCCC
Q 047800 315 SNDANISPVATSCSNEEFKALILEYKPHGSLEKYLYS---GNCSLDIFQRLNSMIDVALALEYMHFGYSA-PVIHCDIKA 390 (547)
Q Consensus 315 ~~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~-~i~H~dlkp 390 (547)
..||||+++++++.+++..++||||++ |+|.+++.. ....+++..+..++.|++.||+||| ++ +++||||||
T Consensus 63 ~~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp 138 (290)
T 3fme_A 63 VDCPFTVTFYGALFREGDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKP 138 (290)
T ss_dssp CCCTTBCCEEEEEECSSSEEEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSG
T ss_pred CCCCeEEEEeeeeeccCCEEEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCH
Confidence 459999999999999999999999997 588887754 3457999999999999999999999 87 999999999
Q ss_pred CcEEeCCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCC----CCCCCCcchhHHHHHHHHHHHHhCCCCCchhh
Q 047800 391 NNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYG----REGRVSANGDVYSFGIMLMKTFIGKKPTDEIF 466 (547)
Q Consensus 391 ~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDv~s~G~il~elltg~~p~~~~~ 466 (547)
+||+++.++.+||+|||+++....... .....||+.|+|||++ .+..++.++||||+|+++|||++|+.||....
T Consensus 139 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 217 (290)
T 3fme_A 139 SNVLINALGQVKMCDFGISGYLVDDVA-KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG 217 (290)
T ss_dssp GGCEECTTCCEEBCCC----------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCS
T ss_pred HHEEECCCCCEEEeecCCccccccccc-ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccC
Confidence 999999999999999999976544322 2334699999999996 55678999999999999999999999997533
Q ss_pred hhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 467 NEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
..............+ .. ....+++++.+++.+||+.||++|||+.|+++.
T Consensus 218 ~~~~~~~~~~~~~~~------------~~------~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 218 TPFQQLKQVVEEPSP------------QL------PADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp CHHHHHHHHHHSCCC------------CC------CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred chHHHHHHHhccCCC------------Cc------ccccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 322222221111100 00 011234568999999999999999999999874
No 199
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.9e-34 Score=282.93 Aligned_cols=197 Identities=22% Similarity=0.263 Sum_probs=155.2
Q ss_pred CCCccccccccC--ccceeEEEEeccCCCChhHHhhhC---CCCCCHHHHHHHHHHHHHHHHHHHccCCCC-----cccc
Q 047800 317 DANISPVATSCS--NEEFKALILEYKPHGSLEKYLYSG---NCSLDIFQRLNSMIDVALALEYMHFGYSAP-----VIHC 386 (547)
Q Consensus 317 H~nIv~l~~~~~--~~~~~~lv~ey~~~gsL~~~l~~~---~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~-----i~H~ 386 (547)
||||+++++++. .....++||||+++|+|.+++... ...+++..++.++.|++.||+||| +.+ ++|+
T Consensus 64 h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~ 140 (279)
T 2w5a_A 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHR 140 (279)
T ss_dssp CTTBCCEEEEEEEGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCC
T ss_pred CCCCCeEEEEEecCCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEe
Confidence 999999999874 457899999999999999999753 235899999999999999999999 777 9999
Q ss_pred CCCCCcEEeCCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhh
Q 047800 387 DIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIF 466 (547)
Q Consensus 387 dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~ 466 (547)
||||+||+++.++.+||+|||.++.............|++.|+|||++.+..++.++||||||+++|||++|+.||....
T Consensus 141 dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 220 (279)
T 2w5a_A 141 DLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS 220 (279)
T ss_dssp CCSGGGEEECSSSCEEECCCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ccchhhEEEcCCCCEEEecCchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccC
Confidence 99999999999999999999999765543322333468999999999998889999999999999999999999997643
Q ss_pred hhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHH
Q 047800 467 NEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLL 536 (547)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~ 536 (547)
..... ...... . .. ..+..++.++.+++.+||+.||++|||+.|+++.+.
T Consensus 221 ~~~~~-~~i~~~------------~-~~------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 221 QKELA-GKIREG------------K-FR------RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp HHHHH-HHHHHT------------C-CC------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred HHHHH-HHHhhc------------c-cc------cCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 22211 110000 0 00 001123456899999999999999999999987653
No 200
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=3.7e-33 Score=280.76 Aligned_cols=211 Identities=19% Similarity=0.220 Sum_probs=157.9
Q ss_pred CCCCccccccccCc--cceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcE
Q 047800 316 NDANISPVATSCSN--EEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393 (547)
Q Consensus 316 ~H~nIv~l~~~~~~--~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Ni 393 (547)
.||||+++++++.+ ....++||||+++++|.+++.. +++.++..++.|++.||+||| +++|+||||||+||
T Consensus 89 ~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Ni 161 (330)
T 3nsz_A 89 GGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNV 161 (330)
T ss_dssp TSTTBCCEEEEEECTTTCCEEEEEECCCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGE
T ss_pred CCCCEEEeeeeeccCCCCceEEEEeccCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHE
Confidence 49999999999987 5678999999999999999864 889999999999999999999 99999999999999
Q ss_pred EeCCCC-cEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhh
Q 047800 394 LLDDNM-VAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMT 471 (547)
Q Consensus 394 ll~~~~-~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~ 471 (547)
+++.++ .+||+|||+++....... .....|+..|+|||++.+ ..++.++||||+||++|||++|+.||.........
T Consensus 162 l~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~ 240 (330)
T 3nsz_A 162 MIDHEHRKLRLIDWGLAEFYHPGQE-YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 240 (330)
T ss_dssp EEETTTTEEEECCCTTCEECCTTCC-CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHH
T ss_pred EEcCCCCEEEEEeCCCceEcCCCCc-cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHH
Confidence 999776 899999999986543322 334478999999999987 56899999999999999999999999654333222
Q ss_pred hhhhhhhccCchhhhhhhhhhc---------------cch--hhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 472 LKHWVNDWLPISIMEVIDANLL---------------SRE--DIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~---------------~~~--~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
+.............+.++.... ... .........+++++.+++.+||+.||++|||++|+++.
T Consensus 241 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 241 LVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp HHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 2222111111111111111000 000 00000112245679999999999999999999999863
No 201
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.5e-33 Score=282.99 Aligned_cols=213 Identities=21% Similarity=0.217 Sum_probs=161.4
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~ 396 (547)
||||+++++++.+.+..++||||+++ +|.+++......+++.++..++.|++.||+||| +.+|+||||||+||+++
T Consensus 71 h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~ 146 (346)
T 1ua2_A 71 HPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLD 146 (346)
T ss_dssp CTTBCCEEEEECCTTCCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEC
T ss_pred CCCCCeEEEEEeeCCceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEc
Confidence 99999999999999999999999975 999999887667999999999999999999999 99999999999999999
Q ss_pred CCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCC-CCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhh
Q 047800 397 DNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHW 475 (547)
Q Consensus 397 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~ 475 (547)
.++.+||+|||+++.............||+.|+|||++.+. .++.++||||+||++|||++|.+||......+. +...
T Consensus 147 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~-~~~i 225 (346)
T 1ua2_A 147 ENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQ-LTRI 225 (346)
T ss_dssp TTCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHH
T ss_pred CCCCEEEEecccceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHH-HHHH
Confidence 99999999999998765444444456799999999999765 489999999999999999999999976543222 1111
Q ss_pred hhhc-cC--chhh---hhhhhhhcc-chhhh-hhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 476 VNDW-LP--ISIM---EVIDANLLS-REDIH-FVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 476 ~~~~-~~--~~~~---~~~~~~~~~-~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
.... .+ .... ...+..... .+... ......++.++.+++.+||..||++|||+.|+++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 226 FETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp HHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred HHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 1110 00 0000 000000000 00000 00002234679999999999999999999999864
No 202
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.5e-33 Score=282.68 Aligned_cols=198 Identities=20% Similarity=0.241 Sum_probs=152.4
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhC---------------------------------------CCCCC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSG---------------------------------------NCSLD 357 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~---------------------------------------~~~l~ 357 (547)
||||+++++++.+.+..++||||+++|+|.+++... ...++
T Consensus 87 hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (345)
T 3hko_A 87 HPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQR 166 (345)
T ss_dssp CTTBCCEEEEEECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHH
T ss_pred CCCcceeehhhccCCeEEEEEeCCCCCcHHHHHHHhhccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999999999999999999998521 11235
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCC--cEEEcccCCcccCCCCC----cccccccCCCCCCCC
Q 047800 358 IFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNM--VAHLSDFGIAKTGEDQS----MTQTQTLATIGYMAP 431 (547)
Q Consensus 358 ~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~--~~kl~Dfg~a~~~~~~~----~~~~~~~gt~~y~aP 431 (547)
+..+..++.|++.||+||| +.+|+||||||+||+++.++ .+||+|||+++...... .......||+.|+||
T Consensus 167 ~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aP 243 (345)
T 3hko_A 167 EKLISNIMRQIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAP 243 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCH
T ss_pred HHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCc
Confidence 6788899999999999999 89999999999999998766 89999999997543211 122345799999999
Q ss_pred CCCCC--CCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHH
Q 047800 432 EYGRE--GRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSF 509 (547)
Q Consensus 432 E~~~~--~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (547)
|++.+ ..++.++||||||+++|||++|+.||......+.... . ........ ......++++
T Consensus 244 E~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~-~------------~~~~~~~~----~~~~~~~~~~ 306 (345)
T 3hko_A 244 EVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQ-V------------LNKKLCFE----NPNYNVLSPL 306 (345)
T ss_dssp HHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH-H------------HHCCCCTT----SGGGGGSCHH
T ss_pred hhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHH-H------------HhcccccC----CcccccCCHH
Confidence 99875 5689999999999999999999999976443322111 1 11110000 0011123456
Q ss_pred HHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 510 VFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 510 l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
+.+++.+||+.||++|||+.++++.
T Consensus 307 ~~~li~~~l~~~p~~Rps~~~~l~h 331 (345)
T 3hko_A 307 ARDLLSNLLNRNVDERFDAMRALQH 331 (345)
T ss_dssp HHHHHHHHSCSCTTTSCCHHHHHHS
T ss_pred HHHHHHHHcCCChhHCCCHHHHhcC
Confidence 8999999999999999999999874
No 203
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=3.7e-33 Score=284.82 Aligned_cols=272 Identities=19% Similarity=0.194 Sum_probs=182.4
Q ss_pred CeEeCCCCccccccCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcC
Q 047800 233 DDLDLSFNKLEGEILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRG 311 (547)
Q Consensus 233 ~~l~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 311 (547)
+.+++...--.....+.|.++.++......+...++.+......... ....+..|+. +..++
T Consensus 21 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~------------~~~~~~~E~~~l~~l~----- 83 (364)
T 3qyz_A 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQT------------YCQRTLREIKILLRFR----- 83 (364)
T ss_dssp CBCCCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHH------------HHHHHHHHHHHHHHCC-----
T ss_pred EeccccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcH------------HHHHHHHHHHHHHhcC-----
Confidence 34444433333344566888888877655554445444221110000 0011444554 55555
Q ss_pred CCCCCCCCccccccccCcc-----ceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCcccc
Q 047800 312 KRPSNDANISPVATSCSNE-----EFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHC 386 (547)
Q Consensus 312 ~~~~~H~nIv~l~~~~~~~-----~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~ 386 (547)
||||+++++++... ...++||||++ |+|.+++... .+++.++..++.|++.||+||| +++|+||
T Consensus 84 -----h~niv~~~~~~~~~~~~~~~~~~iv~e~~~-~~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~ 152 (364)
T 3qyz_A 84 -----HENIIGINDIIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIH---SANVLHR 152 (364)
T ss_dssp -----CTTBCCCCEEECCSSTTTCCCEEEEEECCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred -----CCCCccceeEEecCCccccceEEEEEcccC-cCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecC
Confidence 99999999998654 46899999996 5999999875 4999999999999999999999 9999999
Q ss_pred CCCCCcEEeCCCCcEEEcccCCcccCCCCCc---ccccccCCCCCCCCCCCCCC-CCCcchhHHHHHHHHHHHHhCCCCC
Q 047800 387 DIKANNVLLDDNMVAHLSDFGIAKTGEDQSM---TQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMKTFIGKKPT 462 (547)
Q Consensus 387 dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~s~G~il~elltg~~p~ 462 (547)
||||+||+++.++.+||+|||+++....... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||
T Consensus 153 Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf 232 (364)
T 3qyz_A 153 DLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232 (364)
T ss_dssp CCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSS
T ss_pred CCChHhEEECCCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCC
Confidence 9999999999999999999999986543221 12344799999999987554 4899999999999999999999999
Q ss_pred chhhhhhhhhhhhhhhcc-C--chhhhhhh-------hhhccchhh-hhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHH
Q 047800 463 DEIFNEEMTLKHWVNDWL-P--ISIMEVID-------ANLLSREDI-HFVAKEQFMSFVFNLAMECTVESPEQRINPKEI 531 (547)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~-~--~~~~~~~~-------~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei 531 (547)
......+.. ........ + .......+ ......... .......+++++.+++.+||+.||++|||+.|+
T Consensus 233 ~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~ 311 (364)
T 3qyz_A 233 PGKHYLDQL-NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 311 (364)
T ss_dssp CCSSGGGHH-HHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred CCCChHHHH-HHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 764432221 11111000 0 00000000 000000000 000001234668999999999999999999999
Q ss_pred HH
Q 047800 532 VT 533 (547)
Q Consensus 532 l~ 533 (547)
++
T Consensus 312 l~ 313 (364)
T 3qyz_A 312 LA 313 (364)
T ss_dssp HT
T ss_pred hc
Confidence 86
No 204
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.98 E-value=9.4e-34 Score=302.06 Aligned_cols=197 Identities=20% Similarity=0.335 Sum_probs=159.5
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGN-CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
|||||++++++.+....++||||+++|+|.+++.... ..+++..++.++.||+.||+||| +++|+||||||+||++
T Consensus 243 hp~Iv~l~~~~~~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILl 319 (576)
T 2acx_A 243 SRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILL 319 (576)
T ss_dssp CTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEE
T ss_pred CCCEeeEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEE
Confidence 9999999999999999999999999999999998654 35999999999999999999999 9999999999999999
Q ss_pred CCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhh
Q 047800 396 DDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHW 475 (547)
Q Consensus 396 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~ 475 (547)
+.++.+||+|||+++....... ....+||+.|+|||++.+..++.++||||+||++|||++|+.||......... ..
T Consensus 320 d~~g~vKL~DFGla~~~~~~~~-~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~-~~- 396 (576)
T 2acx_A 320 DDHGHIRISDLGLAVHVPEGQT-IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR-EE- 396 (576)
T ss_dssp CTTSCEEECCCTTCEECCTTCC-EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCH-HH-
T ss_pred eCCCCeEEEecccceecccCcc-ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhH-HH-
Confidence 9999999999999986654322 23357999999999999988999999999999999999999999764321100 00
Q ss_pred hhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCC-----ChHHHHHH
Q 047800 476 VNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRI-----NPKEIVTR 534 (547)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp-----s~~eil~~ 534 (547)
+...+... .. ..+..+++++.+++.+||..||++|| +++|+++.
T Consensus 397 --------i~~~i~~~---~~----~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 397 --------VERLVKEV---PE----EYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp --------HHHHHHHC---CC----CCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred --------HHHHhhcc---cc----cCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 00001000 00 01122356789999999999999999 77888753
No 205
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.98 E-value=3.6e-34 Score=293.12 Aligned_cols=185 Identities=11% Similarity=0.088 Sum_probs=139.1
Q ss_pred ceeEEEEeccCCCChhHHhhhCCCCCCHHHH------HHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCCcEEEc
Q 047800 331 EFKALILEYKPHGSLEKYLYSGNCSLDIFQR------LNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLS 404 (547)
Q Consensus 331 ~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~------~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~~~kl~ 404 (547)
...++||||++ |+|.+++...+..+++..+ ..++.|++.||+||| +++|+||||||+|||++.++.+||+
T Consensus 161 ~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~ 236 (371)
T 3q60_A 161 ANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQ---SKGLVHGHFTPDNLFIMPDGRLMLG 236 (371)
T ss_dssp EEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHH---HTTEEETTCSGGGEEECTTSCEEEC
T ss_pred eeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHH---HCCCccCcCCHHHEEECCCCCEEEE
Confidence 34799999998 8999999875434555555 778899999999999 9999999999999999999999999
Q ss_pred ccCCcccCCCCCcccccccCCCCCCCCCCCCC--CCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhhhhccCc
Q 047800 405 DFGIAKTGEDQSMTQTQTLATIGYMAPEYGRE--GRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPI 482 (547)
Q Consensus 405 Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 482 (547)
|||+++...... ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.......... +.. .
T Consensus 237 DFG~a~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~--~~~----~ 307 (371)
T 3q60_A 237 DVSALWKVGTRG---PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGS--WKR----P 307 (371)
T ss_dssp CGGGEEETTCEE---EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTC--CCB----C
T ss_pred ecceeeecCCCc---cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccc--hhh----h
Confidence 999998654322 13457799999999987 679999999999999999999999997753322110 000 0
Q ss_pred hhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 483 SIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
...... ...........+++++.+++.+||+.||++|||+.++++.
T Consensus 308 ~~~~~~------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 353 (371)
T 3q60_A 308 SLRVPG------TDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET 353 (371)
T ss_dssp CTTSCC------CCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred hhhhcc------ccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000 0000001111235678999999999999999999999853
No 206
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.98 E-value=6.7e-33 Score=274.75 Aligned_cols=212 Identities=20% Similarity=0.239 Sum_probs=159.2
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEE
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGN-CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nil 394 (547)
.||||+++++++..++..++||||++ |+|.+++.... ..+++..+..++.|++.||+||| +++++|+||||+||+
T Consensus 60 ~h~~i~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil 135 (299)
T 2r3i_A 60 NHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLL 135 (299)
T ss_dssp CCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEE
T ss_pred CCCCeeeEEEEEecCCceEEEEEccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHeE
Confidence 49999999999999999999999997 69999998753 46899999999999999999999 899999999999999
Q ss_pred eCCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCC-CCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhh
Q 047800 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGR-VSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLK 473 (547)
Q Consensus 395 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~ 473 (547)
++.++.+||+|||.+..............+|+.|+|||++.+.. ++.++||||+|+++|||++|+.||......+.. .
T Consensus 136 i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~-~ 214 (299)
T 2r3i_A 136 INTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL-F 214 (299)
T ss_dssp ECTTSCEEECSTTHHHHHCCCSBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-H
T ss_pred EcCCCCEEECcchhhhhccCCccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHH-H
Confidence 99999999999999876543333334457899999999998765 799999999999999999999999775433221 1
Q ss_pred hhhhh-ccCc-hh-hhh-----hhhhhcc--chhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHH
Q 047800 474 HWVND-WLPI-SI-MEV-----IDANLLS--REDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVT 533 (547)
Q Consensus 474 ~~~~~-~~~~-~~-~~~-----~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~ 533 (547)
..... ..+. .. ... ..+.... ..... .....++.++.+++.+||..||++|||+.|+++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 215 RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFS-KVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp HHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHH-HHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHhCCCchhhhhHhhcCcccchhhhcccchhhH-hhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 11111 0000 00 000 0000000 00000 000123456899999999999999999999986
No 207
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.98 E-value=7.8e-33 Score=286.61 Aligned_cols=193 Identities=15% Similarity=0.170 Sum_probs=136.5
Q ss_pred cccCCCCccCCcchhcccC--ccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCc
Q 047800 244 GEILRGGSFGNFLVELFEG--NKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANI 320 (547)
Q Consensus 244 ~~~~~~~~~~~l~~l~l~~--N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nI 320 (547)
|...+.|.|+.++.....+ ....++.+....... ..-+..|+. +..++ ||||
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~---------------~~~~~~E~~~l~~l~----------hpni 80 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI---------------SMSACREIALLRELK----------HPNV 80 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC---------------CHHHHHHHHHHHHCC----------CTTB
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC---------------CHHHHHHHHHHHhcC----------CCCe
Confidence 4456678899998876432 223344332211000 001445555 55555 9999
Q ss_pred ccccccc--CccceeEEEEeccCCCChhHHhhhC--------CCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCC
Q 047800 321 SPVATSC--SNEEFKALILEYKPHGSLEKYLYSG--------NCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKA 390 (547)
Q Consensus 321 v~l~~~~--~~~~~~~lv~ey~~~gsL~~~l~~~--------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp 390 (547)
|++++++ ......++||||++ |+|.+++... ...+++..++.++.|++.||+||| +++|+||||||
T Consensus 81 v~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp 156 (405)
T 3rgf_A 81 ISLQKVFLSHADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKP 156 (405)
T ss_dssp CCCCEEEEETTTTEEEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCG
T ss_pred eeEeeEEecCCCCeEEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCH
Confidence 9999999 45678999999996 5888887632 124899999999999999999999 99999999999
Q ss_pred CcEEe----CCCCcEEEcccCCcccCCCCC---cccccccCCCCCCCCCCCCCC-CCCcchhHHHHHHHHHHHHhCCCCC
Q 047800 391 NNVLL----DDNMVAHLSDFGIAKTGEDQS---MTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMKTFIGKKPT 462 (547)
Q Consensus 391 ~Nill----~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~s~G~il~elltg~~p~ 462 (547)
+||++ +.++.+||+|||+++...... .......||+.|+|||++.+. .++.++||||+||++|||++|++||
T Consensus 157 ~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf 236 (405)
T 3rgf_A 157 ANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 236 (405)
T ss_dssp GGEEECCSSTTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred HHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCC
Confidence 99999 677899999999998654321 122335789999999999875 4899999999999999999999999
Q ss_pred chh
Q 047800 463 DEI 465 (547)
Q Consensus 463 ~~~ 465 (547)
...
T Consensus 237 ~~~ 239 (405)
T 3rgf_A 237 HCR 239 (405)
T ss_dssp CCC
T ss_pred CCc
Confidence 653
No 208
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.98 E-value=2.4e-34 Score=295.03 Aligned_cols=247 Identities=12% Similarity=0.097 Sum_probs=169.5
Q ss_pred ccCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCcccc
Q 047800 245 EILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPV 323 (547)
Q Consensus 245 ~~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l 323 (547)
...+.|.++.++......+...+++|........... ....+..|+. +.. .+...|||||++
T Consensus 79 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~----------~~~~~~~E~~~l~~-------l~~l~hpniv~~ 141 (377)
T 3byv_A 79 TVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSN----------AIKQMKEEVLRLRL-------LRGIKNQKQAKV 141 (377)
T ss_dssp EEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTT----------HHHHHHHHHHGGGG-------STTCCSHHHHHH
T ss_pred ceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchH----------HHHHHHHHHHHHHh-------ccccCCHHHHHH
Confidence 3455578888888776544444555422110000000 0011344442 111 223359999999
Q ss_pred ccccC-------ccc-----------------eeEEEEeccCCCChhHHhhhCC------CCCCHHHHHHHHHHHHHHHH
Q 047800 324 ATSCS-------NEE-----------------FKALILEYKPHGSLEKYLYSGN------CSLDIFQRLNSMIDVALALE 373 (547)
Q Consensus 324 ~~~~~-------~~~-----------------~~~lv~ey~~~gsL~~~l~~~~------~~l~~~~~~~i~~~i~~~l~ 373 (547)
++.+. .++ ..++||||+ +|+|.+++.... ..+++..++.++.|++.||+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~ 220 (377)
T 3byv_A 142 HLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLA 220 (377)
T ss_dssp HHCBCCCSEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHH
Confidence 95443 222 378999999 689999998632 12345888899999999999
Q ss_pred HHHccCCCCccccCCCCCcEEeCCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCC-----------CCCcc
Q 047800 374 YMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREG-----------RVSAN 442 (547)
Q Consensus 374 ~lH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~ 442 (547)
||| +++|+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.+
T Consensus 221 ~LH---~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~ 293 (377)
T 3byv_A 221 SLH---HYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA---RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFS 293 (377)
T ss_dssp HHH---HTTEECSCCCGGGEEECTTCCEEECCGGGCEETTC---EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHH
T ss_pred HHH---hCCeecCCCCHHHEEEcCCCCEEEEechhheecCC---cccCCCC-cCccChhhhcccccccccccccccCChh
Confidence 999 99999999999999999999999999999986433 2334467 999999999887 79999
Q ss_pred hhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCC
Q 047800 443 GDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESP 522 (547)
Q Consensus 443 sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 522 (547)
+|||||||++|||++|+.||......... . .+... . ..+++++.+++.+||..||
T Consensus 294 ~DvwSlG~il~elltg~~Pf~~~~~~~~~-~------------~~~~~----~--------~~~~~~~~~li~~~L~~dp 348 (377)
T 3byv_A 294 FDAWALGLVIYWIWCADLPITKDAALGGS-E------------WIFRS----C--------KNIPQPVRALLEGFLRYPK 348 (377)
T ss_dssp HHHHHHHHHHHHHHHSSCCC------CCS-G------------GGGSS----C--------CCCCHHHHHHHHHHTCSSG
T ss_pred hhHHHHHHHHHHHHHCCCCCcccccccch-h------------hhhhh----c--------cCCCHHHHHHHHHHcCCCc
Confidence 99999999999999999999764322210 0 00000 0 1124568999999999999
Q ss_pred CCCCChHHHHH--HHHHHHHH
Q 047800 523 EQRINPKEIVT--RLLKIIES 541 (547)
Q Consensus 523 ~~Rps~~eil~--~L~~i~~~ 541 (547)
++|||+.|+++ -++.+.+.
T Consensus 349 ~~Rpt~~e~l~hp~f~~~~~~ 369 (377)
T 3byv_A 349 EDRLLPLQAMETPEYEQLRTE 369 (377)
T ss_dssp GGCCCHHHHHTSHHHHHHHHH
T ss_pred hhCCCHHHHhhChHHHHHHHH
Confidence 99999999986 34444443
No 209
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.98 E-value=2.7e-33 Score=281.28 Aligned_cols=196 Identities=21% Similarity=0.285 Sum_probs=149.2
Q ss_pred CCCccccccccCc------cceeEEEEeccCCCChhHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCC
Q 047800 317 DANISPVATSCSN------EEFKALILEYKPHGSLEKYLYSGN-CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIK 389 (547)
Q Consensus 317 H~nIv~l~~~~~~------~~~~~lv~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlk 389 (547)
||||+++++++.. ....++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +++++|+|||
T Consensus 80 h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlk 156 (326)
T 2x7f_A 80 HRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIK 156 (326)
T ss_dssp STTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCS
T ss_pred CCCeeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCc
Confidence 9999999999876 467899999999999999998643 46899999999999999999999 8999999999
Q ss_pred CCcEEeCCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCC-----CCCCCcchhHHHHHHHHHHHHhCCCCCch
Q 047800 390 ANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGR-----EGRVSANGDVYSFGIMLMKTFIGKKPTDE 464 (547)
Q Consensus 390 p~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDv~s~G~il~elltg~~p~~~ 464 (547)
|+||+++.++.+||+|||++..............||+.|+|||++. +..++.++|||||||++|||++|+.||..
T Consensus 157 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 236 (326)
T 2x7f_A 157 GQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCD 236 (326)
T ss_dssp GGGEEECTTCCEEECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTT
T ss_pred HHHEEEcCCCCEEEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999976544332333457899999999987 55689999999999999999999999976
Q ss_pred hhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 465 IFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
........ .......+ . .....++..+.+++.+||..||++|||+.++++.
T Consensus 237 ~~~~~~~~-~~~~~~~~-------------~-----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 237 MHPMRALF-LIPRNPAP-------------R-----LKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp SCHHHHHH-HHHHSCCC-------------C-----CSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred CcHHHHHH-HhhcCccc-------------c-----CCccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 43222111 00000000 0 0011124568999999999999999999999873
No 210
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.98 E-value=8.6e-33 Score=272.02 Aligned_cols=191 Identities=23% Similarity=0.315 Sum_probs=158.8
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~ 396 (547)
||||+++++++.+.+..++||||+++|+|.+++.... .+++..+..++.|++.||+||| +++++|+||||+||+++
T Consensus 73 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~ 148 (284)
T 2vgo_A 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMG 148 (284)
T ss_dssp CTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEEC
T ss_pred CCCEeeEEEEEEcCCEEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEc
Confidence 9999999999999999999999999999999998754 6899999999999999999999 99999999999999999
Q ss_pred CCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhh
Q 047800 397 DNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWV 476 (547)
Q Consensus 397 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~ 476 (547)
.++.+||+|||++....... .....|++.|+|||++.+..++.++||||+|+++|||++|+.||......+.. ..
T Consensus 149 ~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~-- 223 (284)
T 2vgo_A 149 YKGELKIADFGWSVHAPSLR--RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETH-RR-- 223 (284)
T ss_dssp TTCCEEECCCTTCEECSSSC--BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHH-HH--
T ss_pred CCCCEEEecccccccCcccc--cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHH-HH--
Confidence 99999999999987554322 23347899999999999989999999999999999999999999764322211 10
Q ss_pred hhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 477 NDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
+..... ..+..++.++.+++.+||..||++|||++++++.
T Consensus 224 ----------~~~~~~--------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 224 ----------IVNVDL--------KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp ----------HHTTCC--------CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred ----------Hhcccc--------CCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 000000 0011224568999999999999999999999874
No 211
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.98 E-value=4.6e-33 Score=282.76 Aligned_cols=262 Identities=18% Similarity=0.160 Sum_probs=175.8
Q ss_pred ccCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCcccc
Q 047800 245 EILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPV 323 (547)
Q Consensus 245 ~~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l 323 (547)
...+.|.++.++......+...++.+......... ....+..|+. +..++ ||||+++
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~------------~~~~~~~E~~~l~~l~----------h~~iv~~ 74 (353)
T 2b9h_A 17 SLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPL------------FALRTLREIKILKHFK----------HENIITI 74 (353)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHH------------HHHHHHHHHHHHHHCC----------CTTBCCE
T ss_pred eEEcCCCCeEEEEEEECCCCcEEEEEeecccccch------------HHHHHHHHHHHHHhCc----------CCCcCCe
Confidence 44555788888776655444334444221110000 0011334444 44545 9999999
Q ss_pred ccccCcc-----ceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCC
Q 047800 324 ATSCSNE-----EFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDN 398 (547)
Q Consensus 324 ~~~~~~~-----~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~ 398 (547)
++++... ...++||||++ |+|.+++... .+++..+..++.|++.||+||| +++|+||||||+||+++.+
T Consensus 75 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~ 148 (353)
T 2b9h_A 75 FNIQRPDSFENFNEVYIIQELMQ-TDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSN 148 (353)
T ss_dssp EEECCCSCSTTCCCEEEEECCCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTT
T ss_pred eeeecccccCccceEEEEEeccC-ccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCC
Confidence 9987654 67899999996 5999999875 5999999999999999999999 9999999999999999999
Q ss_pred CcEEEcccCCcccCCCCCc----------ccccccCCCCCCCCCCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCchhhh
Q 047800 399 MVAHLSDFGIAKTGEDQSM----------TQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMKTFIGKKPTDEIFN 467 (547)
Q Consensus 399 ~~~kl~Dfg~a~~~~~~~~----------~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~s~G~il~elltg~~p~~~~~~ 467 (547)
+.+||+|||+++....... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.....
T Consensus 149 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 228 (353)
T 2b9h_A 149 CDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY 228 (353)
T ss_dssp CCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred CcEEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCc
Confidence 9999999999976543211 1122468999999998764 6789999999999999999999999977543
Q ss_pred hhhhhhhh--hhhccCc---------hhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 468 EEMTLKHW--VNDWLPI---------SIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 468 ~~~~~~~~--~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
........ ....... ...+.+.................+++++.+++.+||..||++|||+.|+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 229 RHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp HHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 22211110 0000000 0001100000000000000012345678999999999999999999999863
No 212
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.98 E-value=7.3e-33 Score=282.61 Aligned_cols=258 Identities=17% Similarity=0.183 Sum_probs=161.3
Q ss_pred ccCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCcccc
Q 047800 245 EILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPV 323 (547)
Q Consensus 245 ~~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l 323 (547)
...+.|.++.++......+...++.|......... ....-+..|+. +..++ ||||+++
T Consensus 35 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~-----------~~~~~~~~E~~~l~~l~----------hpnIv~~ 93 (367)
T 2fst_X 35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-----------IHAKRTYRELRLLKHMK----------HENVIGL 93 (367)
T ss_dssp EECC----CCEEEEEETTTTEEEEEEECSSTTSSH-----------HHHHHHHHHHHHHHHCC----------CTTBCCC
T ss_pred eEEeecCCeEEEEEEECCCCCEEEEEEeCccccCH-----------HHHHHHHHHHHHHHhCC----------CCCCCcE
Confidence 34566888888877554444444444221100000 00011344444 44445 9999999
Q ss_pred ccccCcc------ceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCC
Q 047800 324 ATSCSNE------EFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDD 397 (547)
Q Consensus 324 ~~~~~~~------~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~ 397 (547)
++++... ...++|+||+ +++|.++++.. .+++..+..++.|++.||+||| +++|+||||||+||+++.
T Consensus 94 ~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~ 167 (367)
T 2fst_X 94 LDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 167 (367)
T ss_dssp SEEECSCSSGGGCCCCEEEEECC-CEECC-----C--CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECT
T ss_pred EEEEecCCccccCCeEEEEeccc-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECC
Confidence 9998654 5679999999 78999999764 5999999999999999999999 999999999999999999
Q ss_pred CCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhh
Q 047800 398 NMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWV 476 (547)
Q Consensus 398 ~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~ 476 (547)
++.+||+|||+++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+....+. +....
T Consensus 168 ~~~~kL~DFG~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-l~~i~ 243 (367)
T 2fst_X 168 DCELKILDFGLARHTADE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ-LKLIL 243 (367)
T ss_dssp TCCEEECC------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHH
T ss_pred CCCEEEeecccccccccc---CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHH
Confidence 999999999999765432 234579999999999887 5789999999999999999999999976433221 11111
Q ss_pred hhcc-C-ch---------hhhhhhhhhccchhhhh-hcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 477 NDWL-P-IS---------IMEVIDANLLSREDIHF-VAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 477 ~~~~-~-~~---------~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
.... + .. ....+. .+........ ......++++.+|+.+||..||++|||+.|+++.
T Consensus 244 ~~~g~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 244 RLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHCSCCHHHHTTCCCHHHHHHHH-TSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHhCCCCHHHHHHhhhHHHHHHHh-ccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 1000 0 00 000000 0000000000 0001224568999999999999999999999863
No 213
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.98 E-value=2.6e-33 Score=283.17 Aligned_cols=197 Identities=23% Similarity=0.266 Sum_probs=156.3
Q ss_pred CCCCCccccccccCccceeEEEEeccCCCChhHHhhh---CCCCCCHHHHHHHHHHHHHHHHHHHccCCC-CccccCCCC
Q 047800 315 SNDANISPVATSCSNEEFKALILEYKPHGSLEKYLYS---GNCSLDIFQRLNSMIDVALALEYMHFGYSA-PVIHCDIKA 390 (547)
Q Consensus 315 ~~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~-~i~H~dlkp 390 (547)
..||||+++++++.+++..++||||+++ +|.+++.. ....+++..+..++.|++.||+||| ++ +|+||||||
T Consensus 107 ~~h~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~~ivH~Dlkp 182 (340)
T 3an0_A 107 VDCPFTVTFYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKP 182 (340)
T ss_dssp CCCTTTCCEEEEEECSSCEEEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCSCCS
T ss_pred cCCCcEEEEeeEEEeCCcEEEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCH
Confidence 3499999999999999999999999975 99988864 3457999999999999999999999 76 999999999
Q ss_pred CcEEeCCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCC----CCCCCcchhHHHHHHHHHHHHhCCCCCchhh
Q 047800 391 NNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGR----EGRVSANGDVYSFGIMLMKTFIGKKPTDEIF 466 (547)
Q Consensus 391 ~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~sDv~s~G~il~elltg~~p~~~~~ 466 (547)
+||+++.++.+||+|||+++...... ......||+.|+|||++. +..++.++|||||||++|||++|+.||....
T Consensus 183 ~NIl~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~ 261 (340)
T 3an0_A 183 SNVLINALGQVKMCDFGISGYLVDSV-AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG 261 (340)
T ss_dssp TTEEECSTTCEEECCCSHHHHHSCHH-HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCS
T ss_pred HHEEECCCCCEEEeeCCCceeccccc-ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCcccc
Confidence 99999999999999999997654321 122347999999999964 3468999999999999999999999997533
Q ss_pred hhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 467 NEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
.....+........+ . .....++.++.+++.+||..||++|||+.|+++.
T Consensus 262 ~~~~~~~~~~~~~~~------------~------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 262 TPFQQLKQVVEEPSP------------Q------LPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp CHHHHHHHHHHSCCC------------C------CCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred chHHHHHHHhcCCCC------------C------CCcccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 222222211111000 0 0011234568999999999999999999999874
No 214
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.98 E-value=1.8e-32 Score=279.67 Aligned_cols=197 Identities=24% Similarity=0.321 Sum_probs=157.6
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
.||||+++++++......++||||+++|+|.+++.... .+++..+..++.|++.||.||| +.+++|+||||+||++
T Consensus 158 ~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~ 233 (365)
T 2y7j_A 158 GHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKV-ALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILL 233 (365)
T ss_dssp TCTTBCCEEEEEEBSSEEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEE
T ss_pred CCCCEeEEEEEEeeCCEEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEE
Confidence 39999999999999999999999999999999998653 6999999999999999999999 8999999999999999
Q ss_pred CCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCC------CCCCcchhHHHHHHHHHHHHhCCCCCchhhhhh
Q 047800 396 DDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGRE------GRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEE 469 (547)
Q Consensus 396 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~ 469 (547)
+.++.+|++|||++....... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......
T Consensus 234 ~~~~~ikl~DfG~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~ 312 (365)
T 2y7j_A 234 DDNMQIRLSDFGFSCHLEPGE-KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQIL 312 (365)
T ss_dssp CTTCCEEECCCTTCEECCTTC-CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred CCCCCEEEEecCcccccCCCc-ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHH
Confidence 999999999999997655432 2334579999999998853 358899999999999999999999997632221
Q ss_pred hhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 470 MTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
. ........ .. ........++..+.+++.+||..||++|||+.|+++.
T Consensus 313 ~-~~~i~~~~------------~~----~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 313 M-LRMIMEGQ------------YQ----FSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp H-HHHHHHTC------------CC----CCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred H-HHHHHhCC------------CC----CCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1 11100000 00 0000011224568999999999999999999999863
No 215
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.98 E-value=2.4e-32 Score=281.15 Aligned_cols=194 Identities=23% Similarity=0.374 Sum_probs=151.0
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~ 396 (547)
||||+++++++..++..++||| +.+|+|.+++.... .+++.++..++.|++.||+||| +.+|+||||||+|||++
T Consensus 115 ~~~iv~~~~~~~~~~~~~lv~E-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~ 189 (390)
T 2zmd_A 115 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV 189 (390)
T ss_dssp CTTBCCEEEEEECSSEEEEEEE-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES
T ss_pred CCeEEEEEEEEecCCEEEEEEe-cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE
Confidence 6999999999999999999999 56889999998865 6899999999999999999999 99999999999999996
Q ss_pred CCCcEEEcccCCcccCCCCCc--ccccccCCCCCCCCCCCCC-----------CCCCcchhHHHHHHHHHHHHhCCCCCc
Q 047800 397 DNMVAHLSDFGIAKTGEDQSM--TQTQTLATIGYMAPEYGRE-----------GRVSANGDVYSFGIMLMKTFIGKKPTD 463 (547)
Q Consensus 397 ~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDv~s~G~il~elltg~~p~~ 463 (547)
++.+||+|||+++....... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 190 -~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~ 268 (390)
T 2zmd_A 190 -DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268 (390)
T ss_dssp -SSCEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTT
T ss_pred -CCeEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcch
Confidence 57999999999986543321 1234579999999999865 368999999999999999999999997
Q ss_pred hhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 464 EIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
........+.. +++...... .+...+.++.+++.+||..||++|||+.|+++.
T Consensus 269 ~~~~~~~~~~~------------~~~~~~~~~------~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 269 QIINQISKLHA------------IIDPNHEIE------FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp TCCCHHHHHHH------------HHCTTSCCC------CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhHHHHHHHH------------HhCccccCC------CCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 64322221111 111111000 001113468899999999999999999999864
No 216
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.98 E-value=1.4e-32 Score=283.53 Aligned_cols=266 Identities=17% Similarity=0.169 Sum_probs=178.4
Q ss_pred cCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCccccc
Q 047800 246 ILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPVA 324 (547)
Q Consensus 246 ~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l~ 324 (547)
..+.|.++.++......+...++.|..... . .....+..|+. +..++ .......+||||++++
T Consensus 44 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~-----------~~~~~~~~E~~~l~~l~--~~~~~~~~~~~iv~~~ 107 (397)
T 1wak_A 44 KLGWGHFSTVWLSWDIQGKKFVAMKVVKSA---E-----------HYTETALDEIRLLKSVR--NSDPNDPNREMVVQLL 107 (397)
T ss_dssp EEEECSSEEEEEEEETTTTEEEEEEEECSC---H-----------HHHHHHHHHHHHHHHHH--HSCTTCGGGGGBCCEE
T ss_pred EeeecCCeeEEEEEecCCCeEEEEEEEecC---C-----------cchHHHHHHHHHHHHHh--hcCCCCCCcceeeeee
Confidence 345577888887654444433444421110 0 00011444554 44443 1122234589999999
Q ss_pred cccC----ccceeEEEEeccCCCChhHHhhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCC-CccccCCCCCcEEeCCC
Q 047800 325 TSCS----NEEFKALILEYKPHGSLEKYLYSG-NCSLDIFQRLNSMIDVALALEYMHFGYSA-PVIHCDIKANNVLLDDN 398 (547)
Q Consensus 325 ~~~~----~~~~~~lv~ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~~-~i~H~dlkp~Nill~~~ 398 (547)
+++. .....++||||+ +|++.+.+... ...+++.+++.++.|++.||+||| ++ +|+||||||+|||++.+
T Consensus 108 ~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~~~ 183 (397)
T 1wak_A 108 DDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLSVN 183 (397)
T ss_dssp EEEEEEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEECCC
T ss_pred cceeecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEecc
Confidence 9987 567899999999 55666666543 356999999999999999999999 87 99999999999999877
Q ss_pred C-------------------------------------------------cEEEcccCCcccCCCCCcccccccCCCCCC
Q 047800 399 M-------------------------------------------------VAHLSDFGIAKTGEDQSMTQTQTLATIGYM 429 (547)
Q Consensus 399 ~-------------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~ 429 (547)
+ .+||+|||.++..... .....||+.|+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~---~~~~~gt~~y~ 260 (397)
T 1wak_A 184 EQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH---FTEDIQTRQYR 260 (397)
T ss_dssp HHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC---SCSCCSCGGGC
T ss_pred chhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc---CccCCCCCccc
Confidence 5 7999999999865432 23447899999
Q ss_pred CCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhh-----hhhhhhhh--hccCchhh-------hhhhhh----
Q 047800 430 APEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEE-----MTLKHWVN--DWLPISIM-------EVIDAN---- 491 (547)
Q Consensus 430 aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~-----~~~~~~~~--~~~~~~~~-------~~~~~~---- 491 (547)
|||++.+..++.++|||||||++|||++|+.||....... ..+..... ...+.... +.+...
T Consensus 261 aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 340 (397)
T 1wak_A 261 SLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLK 340 (397)
T ss_dssp CHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBS
T ss_pred CChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccc
Confidence 9999999899999999999999999999999997543221 11111110 00000000 000000
Q ss_pred ---------hccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 492 ---------LLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 492 ---------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
...........+...+.++.+++.+||+.||++|||+.|+++.
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 341 HITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp SCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred cccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 0000000011234557789999999999999999999999863
No 217
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.98 E-value=5.5e-33 Score=273.40 Aligned_cols=189 Identities=14% Similarity=0.197 Sum_probs=152.2
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCC---CCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCc
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGN---CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANN 392 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~---~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~N 392 (547)
.||||+++++++.+++..++||||+++|+|.+++.... ..+++.+++.++.|++.||+||| +++|+||||||+|
T Consensus 69 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~N 145 (289)
T 1x8b_A 69 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSN 145 (289)
T ss_dssp SCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGG
T ss_pred CCCCeeeeeeeeecCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHH
Confidence 39999999999999999999999999999999997631 46899999999999999999999 9999999999999
Q ss_pred EEeCC-------------------CCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCC-CCCcchhHHHHHHHH
Q 047800 393 VLLDD-------------------NMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIML 452 (547)
Q Consensus 393 ill~~-------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~s~G~il 452 (547)
|+++. ...+|++|||.+....... ...||+.|+|||++.+. .++.++||||+|+++
T Consensus 146 Il~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il 221 (289)
T 1x8b_A 146 IFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQ----VEEGDSRFLANEVLQENYTHLPKADIFALALTV 221 (289)
T ss_dssp EEEC--------------------CCCEEECCCTTCEETTCSC----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHH
T ss_pred EEEcCCCCCcccccccccccccCCceEEEEcccccccccCCcc----ccCCCccccChhHhcCCCCCCchhhHHHHHHHH
Confidence 99984 4479999999998654322 23589999999999876 567899999999999
Q ss_pred HHHHhCCCCCchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHH
Q 047800 453 MKTFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIV 532 (547)
Q Consensus 453 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil 532 (547)
||+++|.+|+..... ........ .. ..+..+++++.+++.+||+.||++|||+.|++
T Consensus 222 ~~l~~~~~~~~~~~~----~~~~~~~~------------~~-------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll 278 (289)
T 1x8b_A 222 VCAAGAEPLPRNGDQ----WHEIRQGR------------LP-------RIPQVLSQEFTELLKVMIHPDPERRPSAMALV 278 (289)
T ss_dssp HHHTTCCCCCSSSHH----HHHHHTTC------------CC-------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HHHhcCCCCCcchhH----HHHHHcCC------------CC-------CCCcccCHHHHHHHHHHhCCCcccCCCHHHHh
Confidence 999999987654211 11110000 00 00112245689999999999999999999998
Q ss_pred HH
Q 047800 533 TR 534 (547)
Q Consensus 533 ~~ 534 (547)
+.
T Consensus 279 ~h 280 (289)
T 1x8b_A 279 KH 280 (289)
T ss_dssp TC
T ss_pred hC
Confidence 64
No 218
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.98 E-value=2.2e-32 Score=279.78 Aligned_cols=209 Identities=17% Similarity=0.162 Sum_probs=148.0
Q ss_pred CCCccccccccCccc------eeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCC
Q 047800 317 DANISPVATSCSNEE------FKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKA 390 (547)
Q Consensus 317 H~nIv~l~~~~~~~~------~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp 390 (547)
||||+++++++.... ..++||||+++ +|.+++.. .+++..+..++.|++.||+||| +++|+||||||
T Consensus 83 hpniv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp 155 (371)
T 2xrw_A 83 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKP 155 (371)
T ss_dssp CTTBCCEEEEECSCCSTTTCCEEEEEEECCSE-EHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCG
T ss_pred CCCccceEEeeccccccccccceEEEEEcCCC-CHHHHHhh---ccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCH
Confidence 999999999987654 78999999965 88888864 4899999999999999999999 99999999999
Q ss_pred CcEEeCCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhh
Q 047800 391 NNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEM 470 (547)
Q Consensus 391 ~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~ 470 (547)
+||+++.++.+||+|||+++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||......+.
T Consensus 156 ~NIl~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~ 234 (371)
T 2xrw_A 156 SNIVVKSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ 234 (371)
T ss_dssp GGEEECTTSCEEECCCCC-----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred HHEEEcCCCCEEEEEeeccccccccc-ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 99999999999999999997654322 22345789999999999998999999999999999999999999976433221
Q ss_pred hhhhhhhhccC--ch--------hhhhhhhhhc----------cc--hhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCCh
Q 047800 471 TLKHWVNDWLP--IS--------IMEVIDANLL----------SR--EDIHFVAKEQFMSFVFNLAMECTVESPEQRINP 528 (547)
Q Consensus 471 ~~~~~~~~~~~--~~--------~~~~~~~~~~----------~~--~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~ 528 (547)
.......... .. .......... .. .+.........+.++.+++.+||..||++|||+
T Consensus 235 -~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~ 313 (371)
T 2xrw_A 235 -WNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV 313 (371)
T ss_dssp -HHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCH
T ss_pred -HHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCH
Confidence 1111110000 00 0000000000 00 000001123346779999999999999999999
Q ss_pred HHHHHH
Q 047800 529 KEIVTR 534 (547)
Q Consensus 529 ~eil~~ 534 (547)
+|+++.
T Consensus 314 ~e~l~h 319 (371)
T 2xrw_A 314 DEALQH 319 (371)
T ss_dssp HHHHHS
T ss_pred HHHhCC
Confidence 999875
No 219
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.98 E-value=8.4e-33 Score=284.20 Aligned_cols=213 Identities=23% Similarity=0.275 Sum_probs=155.9
Q ss_pred CCCCccccccccCc--------------------------------------cceeEEEEeccCCCChhHHhhh---CCC
Q 047800 316 NDANISPVATSCSN--------------------------------------EEFKALILEYKPHGSLEKYLYS---GNC 354 (547)
Q Consensus 316 ~H~nIv~l~~~~~~--------------------------------------~~~~~lv~ey~~~gsL~~~l~~---~~~ 354 (547)
.|||||++++++.. ....++||||++ |+|.+.+.. ...
T Consensus 58 ~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~ 136 (383)
T 3eb0_A 58 DHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGR 136 (383)
T ss_dssp CCTTBCCEEEEEEEC-------------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTC
T ss_pred CCCCccchhheeeecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCC
Confidence 49999999999843 344889999997 588877763 345
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeC-CCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCC
Q 047800 355 SLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD-DNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEY 433 (547)
Q Consensus 355 ~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~ 433 (547)
.+++..+..++.|++.||+||| +++|+||||||+||+++ .++.+||+|||+++....... .....+|+.|+|||+
T Consensus 137 ~l~~~~~~~i~~qi~~aL~~LH---~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~t~~y~aPE~ 212 (383)
T 3eb0_A 137 SIPMNLISIYIYQLFRAVGFIH---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP-SVAYICSRFYRAPEL 212 (383)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC-CCCCCCCSSCCCHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHH---HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC-CcCcccCCCccCHHH
Confidence 7999999999999999999999 99999999999999997 688999999999986543322 334478999999999
Q ss_pred CCCCC-CCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhhhhccCchhhhhh--hhhh-------ccchhhhhhcH
Q 047800 434 GREGR-VSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVI--DANL-------LSREDIHFVAK 503 (547)
Q Consensus 434 ~~~~~-~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------~~~~~~~~~~~ 503 (547)
+.+.. ++.++||||+||++|||++|+.||......+. +..............+. .+.. ..........+
T Consensus 213 ~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (383)
T 3eb0_A 213 MLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQ-LVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILP 291 (383)
T ss_dssp HTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSC
T ss_pred hcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCC
Confidence 87754 89999999999999999999999987543322 11111111100000000 0000 00011111112
Q ss_pred HHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 504 EQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 504 ~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
..+++++.+++.+||..||++|||+.|+++.
T Consensus 292 ~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (383)
T 3eb0_A 292 EGTPSLAIDLLEQILRYEPDLRINPYEAMAH 322 (383)
T ss_dssp TTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred CCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 2345678999999999999999999999853
No 220
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=2e-31 Score=280.00 Aligned_cols=235 Identities=24% Similarity=0.257 Sum_probs=211.4
Q ss_pred CCcccCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCcc
Q 047800 2 IPPEIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNT 81 (547)
Q Consensus 2 ip~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 81 (547)
+|..+. ++|+.|+|++|+|+++.+..|.++++|++|+|++|+|+ +..|..|.++++|++|+|++|+|+++.+..
T Consensus 69 iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~----~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 142 (452)
T 3zyi_A 69 VPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIR----QIEVGAFNGLASLNTLELFDNWLTVIPSGA 142 (452)
T ss_dssp CCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC----EECTTTTTTCTTCCEEECCSSCCSBCCTTT
T ss_pred cCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccC----CcChhhccCcccCCEEECCCCcCCccChhh
Confidence 565554 68999999999999999999999999999999999999 566688999999999999999999988888
Q ss_pred ccCCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcC-CCCCCCCCcccccccCcchhhhccccCCcccEEEcc
Q 047800 82 FGNLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSN-NPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLS 160 (547)
Q Consensus 82 ~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls 160 (547)
|.++++|++|+|++|+|+.+++. .|.++++|+.|+|++ |.+..+.... +.+++ +|++|+|+
T Consensus 143 ~~~l~~L~~L~L~~N~l~~~~~~-----~~~~l~~L~~L~l~~~~~l~~i~~~~-~~~l~------------~L~~L~L~ 204 (452)
T 3zyi_A 143 FEYLSKLRELWLRNNPIESIPSY-----AFNRVPSLMRLDLGELKKLEYISEGA-FEGLF------------NLKYLNLG 204 (452)
T ss_dssp SSSCTTCCEEECCSCCCCEECTT-----TTTTCTTCCEEECCCCTTCCEECTTT-TTTCT------------TCCEEECT
T ss_pred hcccCCCCEEECCCCCcceeCHh-----HHhcCCcccEEeCCCCCCccccChhh-ccCCC------------CCCEEECC
Confidence 99999999999999999999887 899999999999999 5666665544 45555 99999999
Q ss_pred CCcCCCCCCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCC
Q 047800 161 SNFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFN 240 (547)
Q Consensus 161 ~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N 240 (547)
+|++++. | .+..+++|+.|+|++|.+ ++..|+.|..+++|+.|+|++|++++..|..|..+++|+.|+|++|
T Consensus 205 ~n~l~~~-~-~~~~l~~L~~L~Ls~N~l------~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 276 (452)
T 3zyi_A 205 MCNIKDM-P-NLTPLVGLEELEMSGNHF------PEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHN 276 (452)
T ss_dssp TSCCSSC-C-CCTTCTTCCEEECTTSCC------SEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCccccc-c-cccccccccEEECcCCcC------cccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCC
Confidence 9999954 4 588999999999999998 5678899999999999999999999999999999999999999999
Q ss_pred ccccccCCC-CccCCcchhcccCcccccc
Q 047800 241 KLEGEILRG-GSFGNFLVELFEGNKLLYG 268 (547)
Q Consensus 241 ~l~~~~~~~-~~~~~l~~l~l~~N~~~c~ 268 (547)
++++.++.. ..+.++..+++.+|++.|.
T Consensus 277 ~l~~~~~~~~~~l~~L~~L~L~~Np~~Cd 305 (452)
T 3zyi_A 277 NLSSLPHDLFTPLRYLVELHLHHNPWNCD 305 (452)
T ss_dssp CCSCCCTTSSTTCTTCCEEECCSSCEECS
T ss_pred cCCccChHHhccccCCCEEEccCCCcCCC
Confidence 999877665 6688999999999999886
No 221
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.97 E-value=1.6e-31 Score=280.96 Aligned_cols=257 Identities=19% Similarity=0.189 Sum_probs=157.6
Q ss_pred CcccCCCCCCcEEEccCCcccc-CCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCc-
Q 047800 3 PPEIGNLHNLEYLGFGHNKLVG-VVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPN- 80 (547)
Q Consensus 3 p~~~~~l~~L~~L~Ls~N~i~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~- 80 (547)
|..|+++++|++|+|++|.+.+ +.+..|.++++|++|+|++|+++ +..|..|.++++|++|+|++|+|++..|.
T Consensus 47 ~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~----~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 122 (455)
T 3v47_A 47 ETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFL----QLETGAFNGLANLEVLTLTQCNLDGAVLSG 122 (455)
T ss_dssp TTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTC----EECTTTTTTCTTCCEEECTTSCCBTHHHHS
T ss_pred hhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccC----ccChhhccCcccCCEEeCCCCCCCccccCc
Confidence 5667777777777777777753 34566777777777777777777 45566777777777777777777764333
Q ss_pred -cccCCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccC-------------------
Q 047800 81 -TFGNLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLS------------------- 140 (547)
Q Consensus 81 -~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~------------------- 140 (547)
.|+.+++|++|+|++|+|+++.+.. .|.++++|++|+|++|+++++.+..+ .++.
T Consensus 123 ~~~~~l~~L~~L~L~~n~l~~~~~~~----~~~~l~~L~~L~L~~n~l~~~~~~~l-~~l~~~~L~~L~l~~n~l~~~~~ 197 (455)
T 3v47_A 123 NFFKPLTSLEMLVLRDNNIKKIQPAS----FFLNMRRFHVLDLTFNKVKSICEEDL-LNFQGKHFTLLRLSSITLQDMNE 197 (455)
T ss_dssp STTTTCTTCCEEECCSSBCCSCCCCG----GGGGCTTCCEEECTTCCBSCCCTTTS-GGGTTCEEEEEECTTCBCTTCST
T ss_pred ccccCcccCCEEECCCCccCccCccc----ccCCCCcccEEeCCCCcccccChhhh-hccccccccccccccCcccccch
Confidence 3777777777777777777775540 26677777777777777776655432 1110
Q ss_pred --------------cchhhhcccc----------------------------------------------------CCcc
Q 047800 141 --------------HSLEFFVMSY----------------------------------------------------CNDI 154 (547)
Q Consensus 141 --------------~~~~~~~~~~----------------------------------------------------~~~L 154 (547)
.++..+.+++ +++|
T Consensus 198 ~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 277 (455)
T 3v47_A 198 YWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGV 277 (455)
T ss_dssp TCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCC
T ss_pred hhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCc
Confidence 0011111111 1245
Q ss_pred cEEEccCCcCCCCCCcCCCCCccccccccccccccCc------------------cccCCCCCcchhcCCCCCEEECcCC
Q 047800 155 LYLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSGY------------------NKLQGSIPESFGDLSNNNTLNLSNN 216 (547)
Q Consensus 155 ~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~------------------n~l~~~~p~~~~~l~~L~~L~l~~N 216 (547)
+.|++++|.+++.+|..|+++++|+.|++++|.+++. |.+++..|..|..+++|++|+|++|
T Consensus 278 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 357 (455)
T 3v47_A 278 KTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYN 357 (455)
T ss_dssp CEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSS
T ss_pred eEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCC
Confidence 5555555555555555555555555555555555310 2224555666666667777777777
Q ss_pred cCCCCCCcchhCCCCCCeEeCCCCccccccCCC-CccCCcchhcccCcccccc
Q 047800 217 NLSGAIPISLEKLSYLDDLDLSFNKLEGEILRG-GSFGNFLVELFEGNKLLYG 268 (547)
Q Consensus 217 ~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~c~ 268 (547)
++++..|.+|..+++|+.|++++|++++.++.. ..+.+++.+++.+|++.|.
T Consensus 358 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 410 (455)
T 3v47_A 358 HIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 410 (455)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred cccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccC
Confidence 666666666666677777777777666555443 4566666677777776654
No 222
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.97 E-value=1.8e-32 Score=268.45 Aligned_cols=192 Identities=24% Similarity=0.349 Sum_probs=149.9
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~ 396 (547)
||||+++++++...+..++||||+++++|.+++.... .+++.++..++.|++.||+||| +++++|+||||+||+++
T Consensus 70 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~ 145 (276)
T 2h6d_A 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLD 145 (276)
T ss_dssp CTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEEC
T ss_pred CCCEeEEEEEEecCCeEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEEC
Confidence 9999999999999999999999999999999997754 6899999999999999999999 89999999999999999
Q ss_pred CCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCC-CcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhh
Q 047800 397 DNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHW 475 (547)
Q Consensus 397 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~ 475 (547)
.++.+|++|||.+........ .....|++.|+|||.+.+..+ +.++||||+|+++|||++|+.||........ ...
T Consensus 146 ~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~- 222 (276)
T 2h6d_A 146 AHMNAKIADFGLSNMMSDGEF-LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTL-FKK- 222 (276)
T ss_dssp TTSCEEECCCCGGGCCCC--------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHH-
T ss_pred CCCCEEEeecccccccCCCcc-eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH-HHH-
Confidence 999999999999976544322 233468999999999988765 6899999999999999999999976432221 000
Q ss_pred hhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 476 VNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
+...... .+..++.++.+++.+||+.||++|||+.|+++.
T Consensus 223 ------------~~~~~~~-------~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 223 ------------IRGGVFY-------IPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp ------------HHHCCCC-------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ------------hhcCccc-------CchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0000000 011224568899999999999999999999874
No 223
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.97 E-value=2.1e-32 Score=279.95 Aligned_cols=259 Identities=14% Similarity=0.145 Sum_probs=173.4
Q ss_pred ccCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCcccc
Q 047800 245 EILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPV 323 (547)
Q Consensus 245 ~~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l 323 (547)
...+.|.++.++......+...++.+.......... ....+..|+. +..++ ||||+++
T Consensus 48 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~-----------~~~~~~~E~~~l~~l~----------h~niv~~ 106 (371)
T 4exu_A 48 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEI-----------FAKRAYRELLLLKHMQ----------HENVIGL 106 (371)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHH-----------HHHHHHHHHHHHHHCC----------CTTBCCC
T ss_pred eEEecCCCeEEEEEEECCCCCEEEEEEecccccchh-----------HHHHHHHHHHHHHhcC----------CCCchhh
Confidence 445568888888776554444444442111000000 0011334444 44555 9999999
Q ss_pred ccccCcccee------EEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCC
Q 047800 324 ATSCSNEEFK------ALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDD 397 (547)
Q Consensus 324 ~~~~~~~~~~------~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~ 397 (547)
++++...+.. ++||||++ |+|.+++.. .+++.++..++.|++.||+||| +.+|+||||||+||+++.
T Consensus 107 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~ 179 (371)
T 4exu_A 107 LDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNE 179 (371)
T ss_dssp SEEECSCSSSTTCCCCEEEEECCC-EEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECT
T ss_pred hhheeccCCcccceeEEEEEcccc-ccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECC
Confidence 9999877554 99999996 699888854 4899999999999999999999 899999999999999999
Q ss_pred CCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhh
Q 047800 398 NMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWV 476 (547)
Q Consensus 398 ~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~ 476 (547)
++.+||+|||+++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+.......
T Consensus 180 ~~~~kL~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~ 256 (371)
T 4exu_A 180 DCELKILDFGLARHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILK 256 (371)
T ss_dssp TCCEEECSTTCC-----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred CCCEEEEecCcccccccC---cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence 999999999999765432 234578999999999887 6789999999999999999999999976443222111110
Q ss_pred hhccC-chh---------hhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 477 NDWLP-ISI---------MEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 477 ~~~~~-~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
....+ ... .....................+++++.+++.+||+.||++|||+.|+++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 257 VTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 00000 000 00000000000000000012235679999999999999999999999864
No 224
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=2.4e-31 Score=278.41 Aligned_cols=235 Identities=22% Similarity=0.226 Sum_probs=210.8
Q ss_pred CCcccCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCcc
Q 047800 2 IPPEIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNT 81 (547)
Q Consensus 2 ip~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 81 (547)
||..+. ++++.|+|++|+|+++.+..|.++++|++|+|++|+|+ +..|..|.++++|++|+|++|+|+.+.+..
T Consensus 58 iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~----~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 131 (440)
T 3zyj_A 58 VPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIR----TIEIGAFNGLANLNTLELFDNRLTTIPNGA 131 (440)
T ss_dssp CCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCC----EECGGGGTTCSSCCEEECCSSCCSSCCTTT
T ss_pred CCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCC----ccChhhccCCccCCEEECCCCcCCeeCHhH
Confidence 566554 68999999999999999999999999999999999999 455578889999999999999999988889
Q ss_pred ccCCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcC-CCCCCCCCcccccccCcchhhhccccCCcccEEEcc
Q 047800 82 FGNLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSN-NPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLS 160 (547)
Q Consensus 82 ~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls 160 (547)
|.++++|++|+|++|+|+.+++. .|.++++|++|+|++ |.++.+.+.. +.+++ +|++|+|+
T Consensus 132 ~~~l~~L~~L~L~~N~i~~~~~~-----~~~~l~~L~~L~l~~~~~l~~i~~~~-~~~l~------------~L~~L~L~ 193 (440)
T 3zyj_A 132 FVYLSKLKELWLRNNPIESIPSY-----AFNRIPSLRRLDLGELKRLSYISEGA-FEGLS------------NLRYLNLA 193 (440)
T ss_dssp SCSCSSCCEEECCSCCCCEECTT-----TTTTCTTCCEEECCCCTTCCEECTTT-TTTCS------------SCCEEECT
T ss_pred hhccccCceeeCCCCcccccCHH-----HhhhCcccCEeCCCCCCCcceeCcch-hhccc------------ccCeecCC
Confidence 99999999999999999999987 899999999999999 5565555544 55555 99999999
Q ss_pred CCcCCCCCCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCC
Q 047800 161 SNFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFN 240 (547)
Q Consensus 161 ~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N 240 (547)
+|.++. +| .+..+++|+.|+|++|.+ ++..|+.|.++++|+.|+|++|++++..+.+|..+++|+.|+|++|
T Consensus 194 ~n~l~~-~~-~~~~l~~L~~L~Ls~N~l------~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 265 (440)
T 3zyj_A 194 MCNLRE-IP-NLTPLIKLDELDLSGNHL------SAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHN 265 (440)
T ss_dssp TSCCSS-CC-CCTTCSSCCEEECTTSCC------CEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTS
T ss_pred CCcCcc-cc-ccCCCcccCEEECCCCcc------CccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCC
Confidence 999994 45 589999999999999998 5677899999999999999999999999999999999999999999
Q ss_pred ccccccCCC-CccCCcchhcccCcccccc
Q 047800 241 KLEGEILRG-GSFGNFLVELFEGNKLLYG 268 (547)
Q Consensus 241 ~l~~~~~~~-~~~~~l~~l~l~~N~~~c~ 268 (547)
++++.++.. ..+.++..+++.+|++.|.
T Consensus 266 ~l~~~~~~~~~~l~~L~~L~L~~Np~~Cd 294 (440)
T 3zyj_A 266 NLTLLPHDLFTPLHHLERIHLHHNPWNCN 294 (440)
T ss_dssp CCCCCCTTTTSSCTTCCEEECCSSCEECS
T ss_pred CCCccChhHhccccCCCEEEcCCCCccCC
Confidence 999877665 6688999999999999985
No 225
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.97 E-value=5e-32 Score=275.86 Aligned_cols=261 Identities=16% Similarity=0.201 Sum_probs=168.6
Q ss_pred cCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCccccc
Q 047800 246 ILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPVA 324 (547)
Q Consensus 246 ~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l~ 324 (547)
..+.|.++.++......+...++.+........... ...++. +..++ ||||++++
T Consensus 30 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~--------------~~~~~~~l~~l~----------h~niv~~~ 85 (360)
T 3e3p_A 30 MAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNR--------------ELQIMQDLAVLH----------HPNIVQLQ 85 (360)
T ss_dssp ---------CEEEEETTTCCEEEEEEEECCTTCCCH--------------HHHHHHHHHHHC----------CTTBCCEE
T ss_pred EEecCCCeEEEEEEECCCCCEEEEEEEecCccccHH--------------HHHHHHHHHhcC----------CCCcccHH
Confidence 455688999987766555444554421110000000 223333 44455 99999999
Q ss_pred cccCccc-------eeEEEEeccCCCChhHHhhh---CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEE
Q 047800 325 TSCSNEE-------FKALILEYKPHGSLEKYLYS---GNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394 (547)
Q Consensus 325 ~~~~~~~-------~~~lv~ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nil 394 (547)
+++...+ ..++||||+++ ++.+.+.. ....+++..+..++.|++.||.|||. ++++|+||||||+||+
T Consensus 86 ~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~~~ivH~Dlkp~NIl 163 (360)
T 3e3p_A 86 SYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHL-PSVNVCHRDIKPHNVL 163 (360)
T ss_dssp EEEEEECSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTS-TTTCCBCSCCCGGGEE
T ss_pred HhhhccccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhC-CCCCeecCcCCHHHEE
Confidence 9986543 37899999976 55554432 33468999999999999999999993 3689999999999999
Q ss_pred eCC-CCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCC-CCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhh
Q 047800 395 LDD-NMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGR-VSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTL 472 (547)
Q Consensus 395 l~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~ 472 (547)
++. ++.+||+|||+++....... .....||+.|+|||++.+.. ++.++|||||||++|||++|+.||........ +
T Consensus 164 l~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~-~ 241 (360)
T 3e3p_A 164 VNEADGTLKLCDFGSAKKLSPSEP-NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQ-L 241 (360)
T ss_dssp EETTTTEEEECCCTTCBCCCTTSC-CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-H
T ss_pred EeCCCCcEEEeeCCCceecCCCCC-cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHH-H
Confidence 996 89999999999986654332 23447899999999987654 89999999999999999999999977443322 1
Q ss_pred hhhhhhcc--Cchhhhhhhhhhcc-------c---hhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 473 KHWVNDWL--PISIMEVIDANLLS-------R---EDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 473 ~~~~~~~~--~~~~~~~~~~~~~~-------~---~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
........ +......+.+.... . ...........++++.+++.+||+.||++|||+.|+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 242 HEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp HHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 11111100 00111111100000 0 000000011135679999999999999999999999864
No 226
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.97 E-value=5.5e-33 Score=280.33 Aligned_cols=201 Identities=18% Similarity=0.233 Sum_probs=136.6
Q ss_pred CCCCccccccccCc----cceeEEEEeccCCCChhHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCC
Q 047800 316 NDANISPVATSCSN----EEFKALILEYKPHGSLEKYLYSGN-CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKA 390 (547)
Q Consensus 316 ~H~nIv~l~~~~~~----~~~~~lv~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp 390 (547)
.||||+++++++.. ....++||||+++|+|.+++.... ..+++.+++.++.|++.||+||| +++|+||||||
T Consensus 80 ~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp 156 (336)
T 3fhr_A 80 GGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKP 156 (336)
T ss_dssp TSTTBCCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred CCCChHHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCH
Confidence 39999999999876 456899999999999999998754 46999999999999999999999 89999999999
Q ss_pred CcEEeCC---CCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhh
Q 047800 391 NNVLLDD---NMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFN 467 (547)
Q Consensus 391 ~Nill~~---~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~ 467 (547)
+||+++. ++.+||+|||+++...... .....||+.|+|||++.+..++.++||||+|+++|||++|+.||.....
T Consensus 157 ~NIll~~~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 234 (336)
T 3fhr_A 157 ENLLYTSKEKDAVLKLTDFGFAKETTQNA--LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTG 234 (336)
T ss_dssp GGEEESCSSTTCCEEECCCTTCEEC------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----
T ss_pred HHEEEEecCCCceEEEeccccceeccccc--cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccc
Confidence 9999976 4569999999997654322 2334689999999999888899999999999999999999999976433
Q ss_pred hhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 468 EEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
........ ..+... ...........++.++.+++.+||..||++|||+.|+++.
T Consensus 235 ~~~~~~~~----------~~~~~~---~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 235 QAISPGMK----------RRIRLG---QYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp -----------------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hhhhhhHH----------Hhhhcc---ccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 22110000 000000 0000000012235568999999999999999999999874
No 227
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.97 E-value=1.2e-32 Score=273.09 Aligned_cols=197 Identities=20% Similarity=0.250 Sum_probs=147.3
Q ss_pred CCCCccccccccCc-------------cceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCC
Q 047800 316 NDANISPVATSCSN-------------EEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAP 382 (547)
Q Consensus 316 ~H~nIv~l~~~~~~-------------~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ 382 (547)
.||||+++++++.+ ....++||||+++|+|.+++......+++..++.++.|++.||+||| +++
T Consensus 60 ~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ 136 (303)
T 1zy4_A 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH---SQG 136 (303)
T ss_dssp CCTTBCCEEEEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHH---HTT
T ss_pred CchHHHHHHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHH---hCC
Confidence 39999999998753 46789999999999999999876667889999999999999999999 899
Q ss_pred ccccCCCCCcEEeCCCCcEEEcccCCcccCCCCC--------------cccccccCCCCCCCCCCCCCC-CCCcchhHHH
Q 047800 383 VIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQS--------------MTQTQTLATIGYMAPEYGREG-RVSANGDVYS 447 (547)
Q Consensus 383 i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~--------------~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~s 447 (547)
++|+||||+||+++.++.+|++|||.++...... .......||+.|+|||++.+. .++.++||||
T Consensus 137 i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s 216 (303)
T 1zy4_A 137 IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYS 216 (303)
T ss_dssp CCCSCCCGGGEEECTTSCEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHH
T ss_pred eecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHH
Confidence 9999999999999999999999999997653211 112334689999999999865 6899999999
Q ss_pred HHHHHHHHHhCCCCCchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCC
Q 047800 448 FGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRIN 527 (547)
Q Consensus 448 ~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 527 (547)
+|+++|||++ ||................ ... .....+...+..+.+++.+||+.||++|||
T Consensus 217 lG~il~~l~~---p~~~~~~~~~~~~~~~~~------------~~~----~~~~~~~~~~~~~~~li~~~l~~dp~~Rps 277 (303)
T 1zy4_A 217 LGIIFFEMIY---PFSTGMERVNILKKLRSV------------SIE----FPPDFDDNKMKVEKKIIRLLIDHDPNKRPG 277 (303)
T ss_dssp HHHHHHHHHS---CCSSHHHHHHHHHHHHST------------TCC----CCTTCCTTTSHHHHHHHHHHTCSSGGGSCC
T ss_pred HHHHHHHHHh---ccCCchhHHHHHHhcccc------------ccc----cCccccccchHHHHHHHHHHHhcCcccCcC
Confidence 9999999998 554322222111111100 000 000011222456889999999999999999
Q ss_pred hHHHHHH
Q 047800 528 PKEIVTR 534 (547)
Q Consensus 528 ~~eil~~ 534 (547)
+.++++.
T Consensus 278 ~~~ll~h 284 (303)
T 1zy4_A 278 ARTLLNS 284 (303)
T ss_dssp HHHHHHS
T ss_pred HHHHhCC
Confidence 9999863
No 228
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.97 E-value=5.3e-32 Score=272.86 Aligned_cols=211 Identities=17% Similarity=0.236 Sum_probs=159.8
Q ss_pred CCCCCccccccccCccceeEEEEeccCCCChhHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcE
Q 047800 315 SNDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGN-CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393 (547)
Q Consensus 315 ~~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Ni 393 (547)
..|++++++++++...+..++||||+ +++|.+++.... ..+++.++..++.|++.||+||| +++|+||||||+||
T Consensus 74 ~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Ni 149 (339)
T 1z57_A 74 NSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENI 149 (339)
T ss_dssp TCTTCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGE
T ss_pred CCceeeEeeecccccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHE
Confidence 34778999999999999999999999 889999998754 36899999999999999999999 99999999999999
Q ss_pred EeCC-------------------CCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHH
Q 047800 394 LLDD-------------------NMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454 (547)
Q Consensus 394 ll~~-------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~e 454 (547)
+++. ++.+||+|||+++..... .....||+.|+|||++.+..++.++||||+||++||
T Consensus 150 l~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~e 226 (339)
T 1z57_A 150 LFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH---HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIE 226 (339)
T ss_dssp EESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSC---CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHH
T ss_pred EEeccccccccCCccccccccccCCCceEeeCcccccCccc---cccccCCccccChHHhhCCCCCcchhhHHHHHHHHH
Confidence 9987 668999999999764432 234478999999999999899999999999999999
Q ss_pred HHhCCCCCchhhhhhhh--hhhhhhhccCchhhhh-----------------------hhhhhccchhhhhhcHHHHHHH
Q 047800 455 TFIGKKPTDEIFNEEMT--LKHWVNDWLPISIMEV-----------------------IDANLLSREDIHFVAKEQFMSF 509 (547)
Q Consensus 455 lltg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~ 509 (547)
|++|+.||......+.. ...... ..+...... +.... .............+++
T Consensus 227 l~~g~~pf~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 304 (339)
T 1z57_A 227 YYLGFTVFPTHDSKEHLAMMERILG-PLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRAC-KPLKEFMLSQDVEHER 304 (339)
T ss_dssp HHHSSCSCCCSCHHHHHHHHHHHHC-SCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHC-CCGGGGCSCCSHHHHH
T ss_pred HHhCCCCCCCCChHHHHHHHHHHhC-CCCHHHHhhccchhHHhhccccccccccccchhhhcC-cchhhhcccchhhHHH
Confidence 99999999764332211 111000 011100000 00000 0000001112344677
Q ss_pred HHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 510 VFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 510 l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
+.+++.+||+.||++|||+.|+++.
T Consensus 305 l~~li~~~L~~dP~~Rpt~~ell~h 329 (339)
T 1z57_A 305 LFDLIQKMLEYDPAKRITLREALKH 329 (339)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred HHHHHHHHhCcCcccccCHHHHhcC
Confidence 9999999999999999999999864
No 229
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=1.8e-32 Score=278.76 Aligned_cols=198 Identities=24% Similarity=0.299 Sum_probs=156.7
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~ 396 (547)
||||+++++++......++||||+++|+|.+++.... .+++.++..++.|++.||+||| +++|+||||||+||+++
T Consensus 118 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~ 193 (355)
T 1vzo_A 118 SPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLD 193 (355)
T ss_dssp CTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEC
T ss_pred CCceeEEEEEEeeCceEEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEC
Confidence 9999999999999999999999999999999998754 6899999999999999999999 89999999999999999
Q ss_pred CCCcEEEcccCCcccCCCCC-cccccccCCCCCCCCCCCCCC--CCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhh
Q 047800 397 DNMVAHLSDFGIAKTGEDQS-MTQTQTLATIGYMAPEYGREG--RVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLK 473 (547)
Q Consensus 397 ~~~~~kl~Dfg~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~--~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~ 473 (547)
.++.+||+|||+++...... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||......... .
T Consensus 194 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~-~ 272 (355)
T 1vzo_A 194 SNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQ-A 272 (355)
T ss_dssp TTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCH-H
T ss_pred CCCcEEEeeCCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchH-H
Confidence 99999999999997654322 223345799999999999863 4789999999999999999999999753221110 0
Q ss_pred hhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCC-----ChHHHHHHH
Q 047800 474 HWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRI-----NPKEIVTRL 535 (547)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp-----s~~eil~~L 535 (547)
.+. ........ ..+..++..+.+++.+||..||++|| |++|+++..
T Consensus 273 ~~~------------~~~~~~~~----~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 273 EIS------------RRILKSEP----PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp HHH------------HHHHHCCC----CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred HHH------------HHHhccCC----CCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 000 00000000 01122345689999999999999999 999998653
No 230
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.97 E-value=2.6e-32 Score=283.80 Aligned_cols=255 Identities=21% Similarity=0.204 Sum_probs=173.2
Q ss_pred cCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCccccc
Q 047800 246 ILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPVA 324 (547)
Q Consensus 246 ~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l~ 324 (547)
..+.|.|+.++......+...+++|..... ... ...|+. +..++ |||||+++
T Consensus 61 ~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~---~~~--------------~~~E~~il~~l~----------hpniv~l~ 113 (420)
T 1j1b_A 61 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD---KRF--------------KNRELQIMRKLD----------HCNIVRLR 113 (420)
T ss_dssp EEEECSSEEEEEEEETTTCCEEEEEEEECC---TTS--------------CCHHHHHHHTCC----------CTTBCCEE
T ss_pred EEeeCCCEEEEEEEECCCCcEEEEEEeccc---chh--------------HHHHHHHHHHcC----------CCCcccee
Confidence 345588888888776555444554421100 000 112333 44444 99999999
Q ss_pred cccCc------cceeEEEEeccCCCChhHHhhh---CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 325 TSCSN------EEFKALILEYKPHGSLEKYLYS---GNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 325 ~~~~~------~~~~~lv~ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
+++.. ....++||||+++ ++.+.+.. ....+++..+..++.|+++||+||| +++|+||||||+|||+
T Consensus 114 ~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl 189 (420)
T 1j1b_A 114 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLL 189 (420)
T ss_dssp EEEEEEETTTTEEEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEE
T ss_pred eEEeccCCCCcceeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEE
Confidence 98853 2346799999976 77666543 3457999999999999999999999 9999999999999999
Q ss_pred CCC-CcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCC-CCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhh
Q 047800 396 DDN-MVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLK 473 (547)
Q Consensus 396 ~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~ 473 (547)
+.+ +.+||+|||+++....... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||......+. +.
T Consensus 190 ~~~~~~~kl~DFG~a~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~-l~ 267 (420)
T 1j1b_A 190 DPDTAVLKLCDFGSAKQLVRGEP-NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ-LV 267 (420)
T ss_dssp ETTTTEEEECCCTTCEECCTTCC-CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HH
T ss_pred eCCCCeEEeccchhhhhcccCCC-ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH-HH
Confidence 955 6789999999986543322 2345789999999998765 689999999999999999999999977433222 22
Q ss_pred hhhhhccCc---hhhhhhhhhhc-------cchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 474 HWVNDWLPI---SIMEVIDANLL-------SREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 474 ~~~~~~~~~---~~~~~~~~~~~-------~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
......... .+.+. .+... .........+...++++.+|+.+||..||++|||+.|+++.
T Consensus 268 ~i~~~lg~p~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 268 EIIKVLGTPTREQIREM-NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HHHHHHCSCCHHHHHHH-CSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHhCCCCHHHHHhh-ChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 221111100 11110 00000 00000000112234678999999999999999999999853
No 231
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.97 E-value=4.6e-32 Score=271.87 Aligned_cols=195 Identities=21% Similarity=0.248 Sum_probs=152.9
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~ 396 (547)
||||+++++++..+. .++||||+++|+|.+++.... .+++.++..++.|++.||+||| +++|+||||||+||+++
T Consensus 74 h~~i~~~~~~~~~~~-~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~ 148 (322)
T 2ycf_A 74 HPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLS 148 (322)
T ss_dssp CTTBCCEEEEEESSS-EEEEEECCTTEETHHHHSTTC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEES
T ss_pred CCCCceEeeEEcCCc-eEEEEecCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEe
Confidence 999999999987655 899999999999999997654 6999999999999999999999 99999999999999998
Q ss_pred CCCc---EEEcccCCcccCCCCCcccccccCCCCCCCCCCCC---CCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhh
Q 047800 397 DNMV---AHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGR---EGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEM 470 (547)
Q Consensus 397 ~~~~---~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~ 470 (547)
.++. +||+|||+++...... ......||+.|+|||++. +..++.++||||+||++|||++|+.||........
T Consensus 149 ~~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~ 227 (322)
T 2ycf_A 149 SQEEDCLIKITDFGHSKILGETS-LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS 227 (322)
T ss_dssp SSSSSCCEEECCCTTCEECCCCH-HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC
T ss_pred cCCCCCeEEEccCccceeccccc-ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH
Confidence 7654 9999999998654332 122346899999999973 56689999999999999999999999976432221
Q ss_pred hhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHH
Q 047800 471 TLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVT 533 (547)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~ 533 (547)
........ ..... ......++.++.+++.+||..||++|||+.++++
T Consensus 228 ~~~~~~~~-------------~~~~~---~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 228 LKDQITSG-------------KYNFI---PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp HHHHHHHT-------------CCCCC---HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHHhC-------------ccccC---chhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 11111000 00000 0001123456899999999999999999999985
No 232
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.97 E-value=3.2e-32 Score=272.34 Aligned_cols=211 Identities=18% Similarity=0.234 Sum_probs=152.2
Q ss_pred CCCccccccccC--------------ccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCC
Q 047800 317 DANISPVATSCS--------------NEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAP 382 (547)
Q Consensus 317 H~nIv~l~~~~~--------------~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ 382 (547)
||||+++++++. +....++||||++ |+|.+++..+ .+++..+..++.|++.||+||| +++
T Consensus 67 h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~ 140 (320)
T 2i6l_A 67 HDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYME-TDLANVLEQG--PLLEEHARLFMYQLLRGLKYIH---SAN 140 (320)
T ss_dssp CTTBCCEEEEECTTSCBCCC----CCSCSEEEEEEECCS-EEHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH---HTT
T ss_pred CCCeeEEEEeccccccccccccccccccCceeEEeeccC-CCHHHHhhcC--CccHHHHHHHHHHHHHHHHHHH---hCC
Confidence 999999998763 4467899999997 6999999764 5899999999999999999999 999
Q ss_pred ccccCCCCCcEEeC-CCCcEEEcccCCcccCCCCC---cccccccCCCCCCCCCCCCC-CCCCcchhHHHHHHHHHHHHh
Q 047800 383 VIHCDIKANNVLLD-DNMVAHLSDFGIAKTGEDQS---MTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMKTFI 457 (547)
Q Consensus 383 i~H~dlkp~Nill~-~~~~~kl~Dfg~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~s~G~il~ellt 457 (547)
|+||||||+||+++ .++.+||+|||+++...... .......+|..|+|||.+.+ ..++.++||||||+++|||++
T Consensus 141 i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~ 220 (320)
T 2i6l_A 141 VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLT 220 (320)
T ss_dssp CBCCCCSGGGEEEETTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHH
T ss_pred EecCCCCHHHEEEcCCCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHh
Confidence 99999999999997 56799999999998654321 11233467999999998865 578999999999999999999
Q ss_pred CCCCCchhhhhhhhhhhhhhhccCc---hhhhhh-------hhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCC
Q 047800 458 GKKPTDEIFNEEMTLKHWVNDWLPI---SIMEVI-------DANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRIN 527 (547)
Q Consensus 458 g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 527 (547)
|+.||......+. ........... ...+.. .................++.++.+++.+||+.||++|||
T Consensus 221 g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 299 (320)
T 2i6l_A 221 GKTLFAGAHELEQ-MQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLT 299 (320)
T ss_dssp SSCSSCCSSHHHH-HHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCC
T ss_pred CCCCCCCCCHHHH-HHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCC
Confidence 9999976543221 11111111000 000000 000000000000001224567999999999999999999
Q ss_pred hHHHHHH
Q 047800 528 PKEIVTR 534 (547)
Q Consensus 528 ~~eil~~ 534 (547)
++|+++.
T Consensus 300 ~~ell~h 306 (320)
T 2i6l_A 300 AEEALSH 306 (320)
T ss_dssp HHHHHTS
T ss_pred HHHHhCC
Confidence 9999864
No 233
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.97 E-value=3.6e-32 Score=275.59 Aligned_cols=209 Identities=20% Similarity=0.273 Sum_probs=158.8
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHH------hhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCC-CCccccCC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKY------LYSG-NCSLDIFQRLNSMIDVALALEYMHFGYS-APVIHCDI 388 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~------l~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~-~~i~H~dl 388 (547)
||||+++++++.+.+..++||||+++|+|.++ +... ...+++..+..++.|++.||+||| + ++++|+||
T Consensus 102 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl 178 (348)
T 2pml_X 102 NEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDV 178 (348)
T ss_dssp CTTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCC
T ss_pred CCCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCC
Confidence 99999999999999999999999999999998 6542 357999999999999999999999 7 99999999
Q ss_pred CCCcEEeCCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCC-CCCc-chhHHHHHHHHHHHHhCCCCCchhh
Q 047800 389 KANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREG-RVSA-NGDVYSFGIMLMKTFIGKKPTDEIF 466 (547)
Q Consensus 389 kp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~sDv~s~G~il~elltg~~p~~~~~ 466 (547)
||+||+++.++.+||+|||.+...... ......|++.|+|||++.+. .++. ++||||+|+++|||++|+.||....
T Consensus 179 ~p~Nil~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 256 (348)
T 2pml_X 179 KPSNILMDKNGRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKI 256 (348)
T ss_dssp CGGGEEECTTSCEEECCCTTCEECBTT--EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ChHhEEEcCCCcEEEeccccccccccc--cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999999999999999999865433 23345799999999999887 5666 9999999999999999999997644
Q ss_pred hhhhhhhhhhhhcc--CchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHH
Q 047800 467 NEEMTLKHWVNDWL--PISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVT 533 (547)
Q Consensus 467 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~ 533 (547)
.............. +........+ .... ........++.++.+++.+||..||++|||+.|+++
T Consensus 257 ~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 257 SLVELFNNIRTKNIEYPLDRNHFLYP-LTNK--KSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp CSHHHHHHHTSCCCCCCCSSSSSTTT-TCC----------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cHHHHHHHHhccCcCCccchhhhhcc-cccc--ccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 32222221111100 0000000000 0000 000011233567899999999999999999999986
No 234
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.97 E-value=7.3e-32 Score=267.17 Aligned_cols=196 Identities=22% Similarity=0.304 Sum_probs=157.8
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
.||||+++++++......++||||+++|+|.+++.... .+++.++..++.|++.||+||| +++++|+||||+||++
T Consensus 82 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~ 157 (298)
T 1phk_A 82 GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILL 157 (298)
T ss_dssp TCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEE
T ss_pred CCCCEeeeeeeeccCCeEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEE
Confidence 49999999999999999999999999999999998753 6899999999999999999999 9999999999999999
Q ss_pred CCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCC------CCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhh
Q 047800 396 DDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGR------EGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEE 469 (547)
Q Consensus 396 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~ 469 (547)
+.++.+||+|||.+....... ......|++.|+|||++. ...++.++||||+|+++|||++|+.||.......
T Consensus 158 ~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~ 236 (298)
T 1phk_A 158 DDDMNIKLTDFGFSCQLDPGE-KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML 236 (298)
T ss_dssp CTTCCEEECCCTTCEECCTTC-CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred cCCCcEEEecccchhhcCCCc-ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHH
Confidence 999999999999997654332 233457899999999885 4568899999999999999999999997643222
Q ss_pred hhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHH
Q 047800 470 MTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVT 533 (547)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~ 533 (547)
. ...... ...... ......++.++.+++.+||..||++|||+.|+++
T Consensus 237 ~-~~~~~~------------~~~~~~----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 237 M-LRMIMS------------GNYQFG----SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp H-HHHHHH------------TCCCCC----TTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred H-HHHHhc------------CCcccC----cccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 1 111000 000000 0011223556899999999999999999999985
No 235
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.97 E-value=2.7e-31 Score=261.56 Aligned_cols=234 Identities=22% Similarity=0.164 Sum_probs=193.6
Q ss_pred CCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCc-ccccCCccccCCCC
Q 047800 9 LHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNS-FSSFIPNTFGNLRN 87 (547)
Q Consensus 9 l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~ 87 (547)
.++|++|+|++|+|+++.+..|.++++|++|+|++|.|+ +..|..|.++++|++|+|++|+ ++.+.|..|.++++
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~----~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~ 106 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLA----RIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGR 106 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC----EECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTT
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccc----eeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcC
Confidence 468999999999999888888999999999999999998 4557888899999999999997 88877889999999
Q ss_pred CCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCCCC
Q 047800 88 LNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGP 167 (547)
Q Consensus 88 L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~~ 167 (547)
|++|+|++|+++++++. .|.++++|++|+|++|+++++++.. +..++ +|++|+|++|++++.
T Consensus 107 L~~L~l~~n~l~~~~~~-----~~~~l~~L~~L~l~~n~l~~~~~~~-~~~l~------------~L~~L~l~~n~l~~~ 168 (285)
T 1ozn_A 107 LHTLHLDRCGLQELGPG-----LFRGLAALQYLYLQDNALQALPDDT-FRDLG------------NLTHLFLHGNRISSV 168 (285)
T ss_dssp CCEEECTTSCCCCCCTT-----TTTTCTTCCEEECCSSCCCCCCTTT-TTTCT------------TCCEEECCSSCCCEE
T ss_pred CCEEECCCCcCCEECHh-----HhhCCcCCCEEECCCCcccccCHhH-hccCC------------CccEEECCCCccccc
Confidence 99999999999988877 7888999999999999998887765 45555 899999999999877
Q ss_pred CCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCCccccccC
Q 047800 168 LPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKLEGEIL 247 (547)
Q Consensus 168 ~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 247 (547)
.+..|.++++|+.|++++|.+ ++..|..|..+++|+.|++++|++++..+..+..+++|+.|++++|++.....
T Consensus 169 ~~~~~~~l~~L~~L~l~~n~l------~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 242 (285)
T 1ozn_A 169 PERAFRGLHSLDRLLLHQNRV------AHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCR 242 (285)
T ss_dssp CTTTTTTCTTCCEEECCSSCC------CEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred CHHHhcCccccCEEECCCCcc------cccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCC
Confidence 777789999999999999988 56778889999999999999999998777788999999999999999886443
Q ss_pred CCCccCCcchhcccCccccccCC
Q 047800 248 RGGSFGNFLVELFEGNKLLYGSP 270 (547)
Q Consensus 248 ~~~~~~~l~~l~l~~N~~~c~~~ 270 (547)
....+..+.......+.+.|..|
T Consensus 243 ~~~~~~~l~~~~~~~~~~~c~~p 265 (285)
T 1ozn_A 243 ARPLWAWLQKFRGSSSEVPCSLP 265 (285)
T ss_dssp GHHHHHHHHHCCSEECCCBEEES
T ss_pred cHHHHHHHHhcccccCccccCCc
Confidence 32222334444555666666544
No 236
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.97 E-value=1.8e-31 Score=282.45 Aligned_cols=249 Identities=23% Similarity=0.271 Sum_probs=179.2
Q ss_pred CcccCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCc-cccCCCCCcEEEccCCcccccCCcc
Q 047800 3 PPEIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPR-FIFNSSKLSILSLAKNSFSSFIPNT 81 (547)
Q Consensus 3 p~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~~~~ 81 (547)
|.+|.++++|++|+|++|.|+++.|..|.++++|++|+|++|+|+ .+|. .|.++++|++|+|++|+|+++.|..
T Consensus 49 ~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~-----~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~ 123 (477)
T 2id5_A 49 QDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLK-----LIPLGVFTGLSNLTKLDISENKIVILLDYM 123 (477)
T ss_dssp TTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC-----SCCTTSSTTCTTCCEEECTTSCCCEECTTT
T ss_pred HhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCC-----ccCcccccCCCCCCEEECCCCccccCChhH
Confidence 567888999999999999998888889999999999999999988 5554 5678888999999999888888888
Q ss_pred ccCCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccC------------cchhhhccc
Q 047800 82 FGNLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLS------------HSLEFFVMS 149 (547)
Q Consensus 82 ~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~------------~~~~~~~~~ 149 (547)
|.++++|++|+|++|.++++.+. .|.++++|++|+|++|+++++++.. +.+++ ..+....+.
T Consensus 124 ~~~l~~L~~L~l~~n~l~~~~~~-----~~~~l~~L~~L~l~~n~l~~~~~~~-l~~l~~L~~L~l~~n~i~~~~~~~~~ 197 (477)
T 2id5_A 124 FQDLYNLKSLEVGDNDLVYISHR-----AFSGLNSLEQLTLEKCNLTSIPTEA-LSHLHGLIVLRLRHLNINAIRDYSFK 197 (477)
T ss_dssp TTTCTTCCEEEECCTTCCEECTT-----SSTTCTTCCEEEEESCCCSSCCHHH-HTTCTTCCEEEEESCCCCEECTTCSC
T ss_pred ccccccCCEEECCCCccceeChh-----hccCCCCCCEEECCCCcCcccChhH-hcccCCCcEEeCCCCcCcEeChhhcc
Confidence 88888888888888888888776 7788888888888888888776544 22222 011111222
Q ss_pred cCC------------------------cccEEEccCCcCCCCCCcCCCCCccccccccccccccCccccCCCCCcchhcC
Q 047800 150 YCN------------------------DILYLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDL 205 (547)
Q Consensus 150 ~~~------------------------~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l 205 (547)
.+. +|++|+|++|.++...+..|.++++|+.|+|++|.+ ++..+..|..+
T Consensus 198 ~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l------~~~~~~~~~~l 271 (477)
T 2id5_A 198 RLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPI------STIEGSMLHEL 271 (477)
T ss_dssp SCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCC------CEECTTSCTTC
T ss_pred cCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcC------CccChhhcccc
Confidence 232 445555555555543334455566666666666655 45556667777
Q ss_pred CCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCCccccccCCC-CccCCcchhcccCcccccc
Q 047800 206 SNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKLEGEILRG-GSFGNFLVELFEGNKLLYG 268 (547)
Q Consensus 206 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~c~ 268 (547)
++|+.|+|++|++++..|.+|..+++|+.|++++|++++..+.. ..+.++..+++.+|++.|.
T Consensus 272 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~ 335 (477)
T 2id5_A 272 LRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACD 335 (477)
T ss_dssp TTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECS
T ss_pred ccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCc
Confidence 77777777777777777777777777888888887777655544 4566777778888887764
No 237
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.97 E-value=1.9e-31 Score=267.62 Aligned_cols=211 Identities=20% Similarity=0.253 Sum_probs=158.0
Q ss_pred CCCccccccccC-----ccceeEEEEeccCCCChhHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCC
Q 047800 317 DANISPVATSCS-----NEEFKALILEYKPHGSLEKYLYSGN-CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKA 390 (547)
Q Consensus 317 H~nIv~l~~~~~-----~~~~~~lv~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp 390 (547)
||||+++++++. .....++||||++ |+|.+++.... ..+++.++..++.|++.||+||| +++|+|+||||
T Consensus 73 h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp 148 (326)
T 1blx_A 73 HPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKP 148 (326)
T ss_dssp CTTBCCEEEEEEEEECSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCG
T ss_pred CCCeEeeeeeeeecccCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCH
Confidence 999999999987 5678999999997 59999998754 35899999999999999999999 99999999999
Q ss_pred CcEEeCCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhh
Q 047800 391 NNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEM 470 (547)
Q Consensus 391 ~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~ 470 (547)
+||+++.++.+||+|||+++...... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||........
T Consensus 149 ~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~ 227 (326)
T 1blx_A 149 QNILVTSSGQIKLADFGLARIYSFQM-ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ 227 (326)
T ss_dssp GGEEECTTCCEEECSCCSCCCCCGGG-GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred HHeEEcCCCCEEEecCcccccccCCC-CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHH
Confidence 99999999999999999997654322 23345789999999999998999999999999999999999999976543221
Q ss_pred hhhhhhhhcc-C--chhhhhh---hhhhccc-hhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHH
Q 047800 471 TLKHWVNDWL-P--ISIMEVI---DANLLSR-EDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVT 533 (547)
Q Consensus 471 ~~~~~~~~~~-~--~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~ 533 (547)
+........ + ....... ....... ..........++..+.+++.+||..||++|||+.|+++
T Consensus 228 -~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 228 -LGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp -HHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -HHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 111111000 0 0000000 0000000 00000011223556899999999999999999999985
No 238
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.97 E-value=9.8e-32 Score=274.01 Aligned_cols=212 Identities=18% Similarity=0.174 Sum_probs=150.3
Q ss_pred CCCccccccccC-----ccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCC
Q 047800 317 DANISPVATSCS-----NEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKAN 391 (547)
Q Consensus 317 H~nIv~l~~~~~-----~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~ 391 (547)
||||+++++++. .....++||||++ |+|.+++......+++..+..++.|++.||+||| +++|+||||||+
T Consensus 88 h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~ 163 (362)
T 3pg1_A 88 HPNILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPG 163 (362)
T ss_dssp CTTBCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGG
T ss_pred CcCccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChH
Confidence 999999999984 3356899999997 6999999877667999999999999999999999 899999999999
Q ss_pred cEEeCCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhh
Q 047800 392 NVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEM 470 (547)
Q Consensus 392 Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~ 470 (547)
||+++.++.+||+|||+++...... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+.
T Consensus 164 NIl~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~ 242 (362)
T 3pg1_A 164 NILLADNNDITICDFNLAREDTADA-NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQ 242 (362)
T ss_dssp GEEECTTCCEEECCTTC----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred HEEEcCCCCEEEEecCccccccccc-ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHH
Confidence 9999999999999999997543322 2334578999999999877 6689999999999999999999999976443222
Q ss_pred hhhhhhhhccCch-----------hhhhhhhhhccchh-hhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 471 TLKHWVNDWLPIS-----------IMEVIDANLLSRED-IHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 471 ~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
............ ..+.+......... .........++.+.+++.+||+.||++|||+.|+++.
T Consensus 243 -~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 243 -LNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp -HHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -HHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 111111100000 00111111100000 0000112234568999999999999999999999864
No 239
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=4.5e-31 Score=262.75 Aligned_cols=238 Identities=23% Similarity=0.293 Sum_probs=209.9
Q ss_pred CCcccCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCcc
Q 047800 2 IPPEIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNT 81 (547)
Q Consensus 2 ip~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 81 (547)
+|..+. ++|++|+|++|+|+.+.+..|.++++|++|+|++|+|+.. +..|..+.++++|++|+|++|.|+. +|..
T Consensus 22 ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~--~~~~~~~~~~~~L~~L~Ls~n~i~~-l~~~ 96 (306)
T 2z66_A 22 VPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFK--GCCSQSDFGTTSLKYLDLSFNGVIT-MSSN 96 (306)
T ss_dssp CCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEE--EEEEHHHHSCSCCCEEECCSCSEEE-EEEE
T ss_pred CCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcc--cCcccccccccccCEEECCCCcccc-Chhh
Confidence 455443 6899999999999987777899999999999999999821 1236777889999999999999998 6778
Q ss_pred ccCCCCCCeeeccccccccccC-chhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEcc
Q 047800 82 FGNLRNLNELALHNNYLTSSTL-ELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLS 160 (547)
Q Consensus 82 ~~~l~~L~~L~L~~N~i~~~~~-~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls 160 (547)
|.++++|++|++++|+++++++ . .|..+++|++|++++|+++++.+.. +..++ +|++|+++
T Consensus 97 ~~~l~~L~~L~l~~n~l~~~~~~~-----~~~~l~~L~~L~l~~n~l~~~~~~~-~~~l~------------~L~~L~l~ 158 (306)
T 2z66_A 97 FLGLEQLEHLDFQHSNLKQMSEFS-----VFLSLRNLIYLDISHTHTRVAFNGI-FNGLS------------SLEVLKMA 158 (306)
T ss_dssp EETCTTCCEEECTTSEEESSTTTT-----TTTTCTTCCEEECTTSCCEECSTTT-TTTCT------------TCCEEECT
T ss_pred cCCCCCCCEEECCCCcccccccch-----hhhhccCCCEEECCCCcCCccchhh-cccCc------------CCCEEECC
Confidence 9999999999999999999886 4 6889999999999999999887766 45555 99999999
Q ss_pred CCcCCC-CCCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCC
Q 047800 161 SNFLTG-PLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSF 239 (547)
Q Consensus 161 ~N~l~~-~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~ 239 (547)
+|.+++ ..|..+..+++|+.|++++|.+ ++..|+.|..+++|+.|+|++|++++..+..+..+++|+.|++++
T Consensus 159 ~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l------~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 232 (306)
T 2z66_A 159 GNSFQENFLPDIFTELRNLTFLDLSQCQL------EQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSL 232 (306)
T ss_dssp TCEEGGGEECSCCTTCTTCCEEECTTSCC------CEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTT
T ss_pred CCccccccchhHHhhCcCCCEEECCCCCc------CCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCC
Confidence 999986 5789999999999999999998 567788999999999999999999988888999999999999999
Q ss_pred CccccccCCC-Ccc-CCcchhcccCcccccc
Q 047800 240 NKLEGEILRG-GSF-GNFLVELFEGNKLLYG 268 (547)
Q Consensus 240 N~l~~~~~~~-~~~-~~l~~l~l~~N~~~c~ 268 (547)
|++++..+.. ..+ .++..+++.+|++.|.
T Consensus 233 N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 233 NHIMTSKKQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp SCCCBCSSSSCCCCCTTCCEEECTTCCEECS
T ss_pred CCCcccCHHHHHhhhccCCEEEccCCCeecc
Confidence 9999877765 555 4899999999999875
No 240
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.97 E-value=1.2e-31 Score=272.21 Aligned_cols=208 Identities=19% Similarity=0.214 Sum_probs=155.5
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGN-CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
|++++.+.+++...+..++||||+ +|++.+++.... ..+++.++..++.|++.||+||| +++|+||||||+||++
T Consensus 81 ~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll 156 (355)
T 2eu9_A 81 KFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILF 156 (355)
T ss_dssp CSCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEE
T ss_pred ceeEEEeeeeeeeCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEE
Confidence 555999999999999999999999 567777776543 56999999999999999999999 9999999999999999
Q ss_pred -------------------CCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHH
Q 047800 396 -------------------DDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTF 456 (547)
Q Consensus 396 -------------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~ell 456 (547)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++||||+||++|||+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 233 (355)
T 2eu9_A 157 VNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH---HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYY 233 (355)
T ss_dssp SCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred ecccccccccccccccccccCCCcEEEeecCcccccccc---ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHH
Confidence 56789999999999764432 23457999999999999999999999999999999999
Q ss_pred hCCCCCchhhhhhhh--hhhhhhhccCchhhhh-----------------------hhhhhccchhhhhhcHHHHHHHHH
Q 047800 457 IGKKPTDEIFNEEMT--LKHWVNDWLPISIMEV-----------------------IDANLLSREDIHFVAKEQFMSFVF 511 (547)
Q Consensus 457 tg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~l~ 511 (547)
+|+.||......+.. ...... ..+...... ...... ............+.++.
T Consensus 234 ~g~~pf~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~ 311 (355)
T 2eu9_A 234 RGFTLFQTHENREHLVMMEKILG-PIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCK-PLKSYMLQDSLEHVQLF 311 (355)
T ss_dssp HSSCSCCCSSHHHHHHHHHHHHC-CCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCC-CGGGGCSCCSHHHHHHH
T ss_pred hCCCCCCCCCHHHHHHHHHHHcC-CCcHHHhhhccchhhhcccccccccccchhccccccCC-cccccccccchhHHHHH
Confidence 999999764432211 111110 001100000 000000 00000111223356799
Q ss_pred HHHhhhcCcCCCCCCChHHHHH
Q 047800 512 NLAMECTVESPEQRINPKEIVT 533 (547)
Q Consensus 512 ~li~~cl~~dp~~Rps~~eil~ 533 (547)
+++.+||+.||++|||+.|+++
T Consensus 312 ~li~~~L~~dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 312 DLMRRMLEFDPAQRITLAEALL 333 (355)
T ss_dssp HHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHHHhcCChhhCcCHHHHhc
Confidence 9999999999999999999985
No 241
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.97 E-value=6.5e-32 Score=274.44 Aligned_cols=257 Identities=15% Similarity=0.152 Sum_probs=172.7
Q ss_pred ccCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCcccc
Q 047800 245 EILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPV 323 (547)
Q Consensus 245 ~~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l 323 (547)
...+.|.++.++......+...++.+......... . ....+..|+. +..++ ||||+++
T Consensus 30 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~----------~~~~~~~E~~~l~~l~----------h~~iv~~ 88 (353)
T 3coi_A 30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSE-I----------FAKRAYRELLLLKHMQ----------HENVIGL 88 (353)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSH-H----------HHHHHHHHHHHHHHCC----------CTTBCCC
T ss_pred eeEecCCCeEEEEEEECCCCCEEEEEEecccccch-H----------HHHHHHHHHHHHHhcC----------CCCcccH
Confidence 34455788888877655444444444221100000 0 0011344444 44444 9999999
Q ss_pred ccccCccce------eEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCC
Q 047800 324 ATSCSNEEF------KALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDD 397 (547)
Q Consensus 324 ~~~~~~~~~------~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~ 397 (547)
++++..... .++||||++ |+|.+++.. .+++.++..++.|++.||+||| +++|+||||||+||+++.
T Consensus 89 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~ 161 (353)
T 3coi_A 89 LDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNE 161 (353)
T ss_dssp SEEECSCSSGGGCCCCEEEEECCS-EEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECT
T ss_pred hheEecccccccceeEEEEecccc-CCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECC
Confidence 999987643 499999996 599888754 4899999999999999999999 999999999999999999
Q ss_pred CCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhh
Q 047800 398 NMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWV 476 (547)
Q Consensus 398 ~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~ 476 (547)
++.+||+|||+++..... .....+|+.|+|||++.+ ..++.++||||+|+++|||++|+.||......+. +....
T Consensus 162 ~~~~kl~Dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-~~~i~ 237 (353)
T 3coi_A 162 DCELKILDFGLARHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ-LTQIL 237 (353)
T ss_dssp TCCEEECSTTCTTC-----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHH-HHHHH
T ss_pred CCcEEEeecccccCCCCC---ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHH
Confidence 999999999999764432 233478999999999887 6789999999999999999999999976433221 11111
Q ss_pred hh--ccCchh---------hhhhhhhhccchhh-hhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 477 ND--WLPISI---------MEVIDANLLSREDI-HFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 477 ~~--~~~~~~---------~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
.. ..+... ...+.. ....... .......+++++.+++.+||..||++|||+.++++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 238 KVTGVPGTEFVQKLNDKAAKSYIQS-LPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp HHHCBCCHHHHTTCSCHHHHHHHHT-SCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHhCCCCHHHHHHHhhHHHHHHHHh-CcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 10 000000 000000 0000000 000012335679999999999999999999999863
No 242
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.97 E-value=3.2e-32 Score=272.20 Aligned_cols=197 Identities=20% Similarity=0.237 Sum_probs=146.2
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCC-CccccCCCCCcEE
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSA-PVIHCDIKANNVL 394 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~-~i~H~dlkp~Nil 394 (547)
.||||+++++++.+++..++||||+ ++.+..+.......+++..+..++.|++.||+||| ++ +++|+||||+||+
T Consensus 82 ~h~~i~~~~~~~~~~~~~~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil 157 (318)
T 2dyl_A 82 DCPYIVQCFGTFITNTDVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNIL 157 (318)
T ss_dssp TCTTBCCEEEEEECSSEEEEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEE
T ss_pred CCCceeeEEEEEecCCcEEEEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEE
Confidence 3999999999999999999999999 55666666554457999999999999999999999 75 9999999999999
Q ss_pred eCCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCC-----CCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhh
Q 047800 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGR-----EGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEE 469 (547)
Q Consensus 395 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~ 469 (547)
++.++.+||+|||++....... ......||+.|+|||++. +..++.++||||||+++|||++|+.||.......
T Consensus 158 ~~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~ 236 (318)
T 2dyl_A 158 LDERGQIKLCDFGISGRLVDDK-AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDF 236 (318)
T ss_dssp ECTTSCEEECCCTTC---------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHH
T ss_pred ECCCCCEEEEECCCchhccCCc-cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccH
Confidence 9999999999999997654332 223346899999999985 4568899999999999999999999997633222
Q ss_pred hhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 470 MTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
...........+ ..+ ....++.++.+++.+||..||++|||++++++.
T Consensus 237 ~~~~~~~~~~~~------------~~~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 237 EVLTKVLQEEPP------------LLP-----GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp HHHHHHHHSCCC------------CCC-----SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred HHHHHHhccCCC------------CCC-----ccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 222211111000 000 001124568999999999999999999999874
No 243
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.97 E-value=2.2e-31 Score=273.51 Aligned_cols=145 Identities=19% Similarity=0.204 Sum_probs=127.0
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGN-CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
|++|+++++++...+..++||||++ |+|.+++.... ..+++..+..++.|++.||.|||. +..+|+||||||+||++
T Consensus 115 ~~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~-~~~~ivHrDlkp~NIll 192 (382)
T 2vx3_A 115 KYYIVHLKRHFMFRNHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT-PELSIIHCDLKPENILL 192 (382)
T ss_dssp GGGBCCEEEEEEETTEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTS-TTTCEECCCCSGGGEEE
T ss_pred ceeEEEeeeeeccCCceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhcc-CCCCEEcCCCCcccEEE
Confidence 5579999999999999999999996 59999998754 468999999999999999999992 14689999999999999
Q ss_pred C--CCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhh
Q 047800 396 D--DNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIF 466 (547)
Q Consensus 396 ~--~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~ 466 (547)
+ .++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 193 ~~~~~~~~kL~DFG~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 193 CNPKRSAIKIVDFGSSCQLGQR---IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp SSTTSCCEEECCCTTCEETTCC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ecCCCCcEEEEeccCceecccc---cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 4 5788999999999865432 234578999999999999999999999999999999999999998643
No 244
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.97 E-value=1.8e-31 Score=287.36 Aligned_cols=265 Identities=20% Similarity=0.237 Sum_probs=180.2
Q ss_pred ccCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCcccc
Q 047800 245 EILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPV 323 (547)
Q Consensus 245 ~~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l 323 (547)
...+.|.++.++......+...++.+......... ....+..|+. +..++ ||||+++
T Consensus 20 ~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~------------~~~~~~~Ei~iL~~L~----------HpnIV~l 77 (676)
T 3qa8_A 20 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPK------------NRERWCLEIQIMKKLN----------HPNVVSA 77 (676)
T ss_dssp CCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHH------------HHHHHHHHHHHHHHCC----------BTTBCCE
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHH------------HHHHHHHHHHHHHhCC----------CCCCCce
Confidence 34556888888876655554445554221100000 0011444555 55555 9999999
Q ss_pred ccccCc------cceeEEEEeccCCCChhHHhhhCC--CCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 324 ATSCSN------EEFKALILEYKPHGSLEKYLYSGN--CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 324 ~~~~~~------~~~~~lv~ey~~~gsL~~~l~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
++++.. .+..++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.+|+||||||+||++
T Consensus 78 ~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl 154 (676)
T 3qa8_A 78 REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVL 154 (676)
T ss_dssp EECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEE
T ss_pred eeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEe
Confidence 998765 677899999999999999998743 35889999999999999999999 8999999999999999
Q ss_pred CCCCc---EEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhh
Q 047800 396 DDNMV---AHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTL 472 (547)
Q Consensus 396 ~~~~~---~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~ 472 (547)
+.++. +||+|||.++...... ......||+.|+|||++.+..++.++||||+|+++||+++|+.||........
T Consensus 155 ~~~g~~~~vKL~DFG~a~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~-- 231 (676)
T 3qa8_A 155 QPGPQRLIHKIIDLGYAKELDQGE-LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQ-- 231 (676)
T ss_dssp ECCSSSCEEEECSCCCCCBTTSCC-CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHH--
T ss_pred ecCCCceeEEEccccccccccccc-ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhh--
Confidence 86654 9999999998765433 23345799999999999999999999999999999999999999976322211
Q ss_pred hhhhhhccCch-----hhhhhhhhh--ccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHH-----HHHHHHHH
Q 047800 473 KHWVNDWLPIS-----IMEVIDANL--LSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEI-----VTRLLKII 539 (547)
Q Consensus 473 ~~~~~~~~~~~-----~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei-----l~~L~~i~ 539 (547)
|........ ..+...... .............+++.+.+++.+||..||++|||+.++ .+.+..+.
T Consensus 232 --~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL 308 (676)
T 3qa8_A 232 --WHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSIL 308 (676)
T ss_dssp --SSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHH
T ss_pred --hhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHH
Confidence 111000000 000000000 000000011123346779999999999999999999884 45554443
No 245
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.97 E-value=6.1e-32 Score=266.42 Aligned_cols=195 Identities=19% Similarity=0.243 Sum_probs=154.7
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~ 396 (547)
||||+++++++.+....++|+||+++++|.+++.... .+++.++..++.|++.||+||| +++++|+||||+||+++
T Consensus 80 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~ 155 (287)
T 2wei_A 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLE 155 (287)
T ss_dssp CTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEES
T ss_pred CCCccEEEEEEeCCCeEEEEEEccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEe
Confidence 9999999999999999999999999999999887654 6899999999999999999999 99999999999999997
Q ss_pred CC---CcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhh
Q 047800 397 DN---MVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLK 473 (547)
Q Consensus 397 ~~---~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~ 473 (547)
.+ +.+||+|||++........ .....|++.|+|||.+.+ .++.++||||+|+++|+|++|+.||......+. ..
T Consensus 156 ~~~~~~~~kL~Dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~ 232 (287)
T 2wei_A 156 SKEKDCDIKIIDFGLSTCFQQNTK-MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI-LK 232 (287)
T ss_dssp CSSTTCCEEECSTTGGGTBCCCSS-CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HH
T ss_pred cCCCcccEEEeccCcceeecCCCc-cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHH-HH
Confidence 54 4799999999876543322 223358899999999875 489999999999999999999999976433221 11
Q ss_pred hhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 474 HWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
........ ........++.++.+++.+||..||++|||+.|+++.
T Consensus 233 ~~~~~~~~----------------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 233 RVETGKYA----------------FDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp HHHHCCCC----------------CCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHcCCCC----------------CCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 11000000 0000012234568999999999999999999999874
No 246
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.97 E-value=1.1e-31 Score=276.83 Aligned_cols=212 Identities=20% Similarity=0.230 Sum_probs=152.7
Q ss_pred CCCccccccccCcc------ceeEEEEeccCCCChhHHhh---hCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccC
Q 047800 317 DANISPVATSCSNE------EFKALILEYKPHGSLEKYLY---SGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCD 387 (547)
Q Consensus 317 H~nIv~l~~~~~~~------~~~~lv~ey~~~gsL~~~l~---~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~d 387 (547)
||||+++++++... ...++||||+++ ++.+.+. .....+++..+..++.|++.||+||| +++|+|||
T Consensus 91 h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrD 166 (394)
T 4e7w_A 91 HPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRD 166 (394)
T ss_dssp CTTBCCEEEEEEEESSSSSCEEEEEEEECCSE-EHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSC
T ss_pred CCCcceEEEEEEecCCCCCceEEEEEeeccCc-cHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCC
Confidence 99999999998543 348899999977 4444332 22346999999999999999999999 99999999
Q ss_pred CCCCcEEeC-CCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCC-CCCcchhHHHHHHHHHHHHhCCCCCchh
Q 047800 388 IKANNVLLD-DNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMKTFIGKKPTDEI 465 (547)
Q Consensus 388 lkp~Nill~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~s~G~il~elltg~~p~~~~ 465 (547)
|||+||+++ .++.+||+|||+++....... .....+|+.|+|||++.+. .++.++||||+||++|||++|+.||...
T Consensus 167 lkp~Nill~~~~~~~kL~DFG~a~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 245 (394)
T 4e7w_A 167 IKPQNLLLDPPSGVLKLIDFGSAKILIAGEP-NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGE 245 (394)
T ss_dssp CSGGGEEEETTTTEEEECCCTTCEECCTTCC-CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCHHHEEEcCCCCcEEEeeCCCcccccCCCC-CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999999998 789999999999986543322 2345789999999998765 4899999999999999999999999875
Q ss_pred hhhhhhhhhhhhhcc-Cc-hhhhhhhhhhcc-------chhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 466 FNEEMTLKHWVNDWL-PI-SIMEVIDANLLS-------REDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 466 ~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
...+.. ........ +. .......+.... ........+..+++++.+++.+||..||++|||+.|+++.
T Consensus 246 ~~~~~l-~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 246 SGIDQL-VEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp SHHHHH-HHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred CHHHHH-HHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 433221 11111100 00 000000000000 0000111112235679999999999999999999999863
No 247
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.97 E-value=3e-32 Score=273.87 Aligned_cols=200 Identities=24% Similarity=0.238 Sum_probs=137.0
Q ss_pred CCCCCccccccccCccceeEEEEeccCCCChhHHhhh----CCCCCCHHHHHHHHHHHHHHHHHHHccCCC-CccccCCC
Q 047800 315 SNDANISPVATSCSNEEFKALILEYKPHGSLEKYLYS----GNCSLDIFQRLNSMIDVALALEYMHFGYSA-PVIHCDIK 389 (547)
Q Consensus 315 ~~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~----~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~-~i~H~dlk 389 (547)
..||||+++++++..++..++||||+++ +|.+++.. ....+++..+..++.|++.||.||| +. +++|||||
T Consensus 78 ~~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlk 153 (327)
T 3aln_A 78 SDCPYIVQFYGALFREGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIK 153 (327)
T ss_dssp CCCTTBCCEEEEEECSSEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCC
T ss_pred CCCCcEeeeeeEEEeCCceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCC
Confidence 4599999999999999999999999975 88887763 2346899999999999999999999 87 99999999
Q ss_pred CCcEEeCCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCC----CCCCCCcchhHHHHHHHHHHHHhCCCCCchh
Q 047800 390 ANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYG----REGRVSANGDVYSFGIMLMKTFIGKKPTDEI 465 (547)
Q Consensus 390 p~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDv~s~G~il~elltg~~p~~~~ 465 (547)
|+||+++.++.+||+|||+++...... ......||+.|+|||++ .+..++.++||||||+++|||++|+.||...
T Consensus 154 p~NIll~~~~~~kl~Dfg~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 232 (327)
T 3aln_A 154 PSNILLDRSGNIKLCDFGISGQLVDSI-AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKW 232 (327)
T ss_dssp GGGEEEETTTEEEECCCSSSCC-------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC
T ss_pred HHHEEEcCCCCEEEccCCCceeccccc-ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence 999999999999999999997654332 22334689999999998 4566899999999999999999999999753
Q ss_pred hhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 466 FNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
...............+ .. .......+++++.+++.+||..||++|||+.++++.
T Consensus 233 ~~~~~~~~~~~~~~~~---------~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 233 NSVFDQLTQVVKGDPP---------QL------SNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp -------CCCCCSCCC---------CC------CCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred chHHHHHHHHhcCCCC---------CC------CCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 2211111111000000 00 000001224568999999999999999999999864
No 248
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.97 E-value=1.6e-31 Score=266.80 Aligned_cols=232 Identities=25% Similarity=0.338 Sum_probs=210.2
Q ss_pred CCCcEEEccCCcccc--CCChhhcCCCCCCEEEccc-ccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCC
Q 047800 10 HNLEYLGFGHNKLVG--VVPATIFNLSTLKHLELYN-NSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLR 86 (547)
Q Consensus 10 ~~L~~L~Ls~N~i~~--~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 86 (547)
.+++.|+|++|+|++ .+|..|.++++|++|+|++ |.+. +.+|..|.++++|++|+|++|+|++..|..|.+++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~----~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~ 125 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLV----GPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIK 125 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEE----SCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCT
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCccc----ccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCC
Confidence 589999999999998 8999999999999999995 9998 78999999999999999999999988999999999
Q ss_pred CCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCCC
Q 047800 87 NLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTG 166 (547)
Q Consensus 87 ~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~ 166 (547)
+|++|+|++|+|++..+. .|..+++|++|+|++|+|++..+.. +..+. .+|++|++++|++++
T Consensus 126 ~L~~L~Ls~N~l~~~~p~-----~~~~l~~L~~L~L~~N~l~~~~p~~-l~~l~-----------~~L~~L~L~~N~l~~ 188 (313)
T 1ogq_A 126 TLVTLDFSYNALSGTLPP-----SISSLPNLVGITFDGNRISGAIPDS-YGSFS-----------KLFTSMTISRNRLTG 188 (313)
T ss_dssp TCCEEECCSSEEESCCCG-----GGGGCTTCCEEECCSSCCEEECCGG-GGCCC-----------TTCCEEECCSSEEEE
T ss_pred CCCEEeCCCCccCCcCCh-----HHhcCCCCCeEECcCCcccCcCCHH-Hhhhh-----------hcCcEEECcCCeeec
Confidence 999999999999987776 7999999999999999999776666 33332 179999999999999
Q ss_pred CCCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCCcccccc
Q 047800 167 PLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKLEGEI 246 (547)
Q Consensus 167 ~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~ 246 (547)
.+|..+..++ |+.|++++|.+ ++..|..|..+++|+.|+|++|++++.+|. +..+++|+.|++++|++++..
T Consensus 189 ~~~~~~~~l~-L~~L~Ls~N~l------~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~ 260 (313)
T 1ogq_A 189 KIPPTFANLN-LAFVDLSRNML------EGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTL 260 (313)
T ss_dssp ECCGGGGGCC-CSEEECCSSEE------EECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECC
T ss_pred cCChHHhCCc-ccEEECcCCcc------cCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcC
Confidence 9999999997 99999999998 568899999999999999999999977765 888999999999999999877
Q ss_pred CCC-CccCCcchhcccCccccccCC
Q 047800 247 LRG-GSFGNFLVELFEGNKLLYGSP 270 (547)
Q Consensus 247 ~~~-~~~~~l~~l~l~~N~~~c~~~ 270 (547)
|.. ..+.+++.+++.+|++....|
T Consensus 261 p~~l~~l~~L~~L~Ls~N~l~~~ip 285 (313)
T 1ogq_A 261 PQGLTQLKFLHSLNVSFNNLCGEIP 285 (313)
T ss_dssp CGGGGGCTTCCEEECCSSEEEEECC
T ss_pred ChHHhcCcCCCEEECcCCcccccCC
Confidence 765 678899999999999865444
No 249
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.97 E-value=1.6e-31 Score=278.42 Aligned_cols=196 Identities=17% Similarity=0.285 Sum_probs=148.4
Q ss_pred CCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEe
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill 395 (547)
.|||||++++++.+....++|||||+ |+|.+++..........++..++.|++.||+||| +++|+||||||+||++
T Consensus 76 ~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll 151 (432)
T 3p23_A 76 EHPNVIRYFCTEKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILI 151 (432)
T ss_dssp CCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEE
T ss_pred CCCCcCeEEEEEecCCEEEEEEECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEE
Confidence 39999999999999999999999996 5999999887655666677899999999999999 9999999999999999
Q ss_pred CC-----CCcEEEcccCCcccCCCCC---cccccccCCCCCCCCCCCCC---CCCCcchhHHHHHHHHHHHHh-CCCCCc
Q 047800 396 DD-----NMVAHLSDFGIAKTGEDQS---MTQTQTLATIGYMAPEYGRE---GRVSANGDVYSFGIMLMKTFI-GKKPTD 463 (547)
Q Consensus 396 ~~-----~~~~kl~Dfg~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~---~~~~~~sDv~s~G~il~ellt-g~~p~~ 463 (547)
+. ...+||+|||+++...... .......||+.|+|||++.+ ..++.++||||+||++|||++ |..||.
T Consensus 152 ~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~ 231 (432)
T 3p23_A 152 SMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFG 231 (432)
T ss_dssp CCCBTTTBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTB
T ss_pred ecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcc
Confidence 43 3468899999998654322 12234579999999999983 567889999999999999999 999986
Q ss_pred hhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHH
Q 047800 464 EIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVT 533 (547)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~ 533 (547)
.......... ..... .. ...........+.+++.+||+.||++|||+.|+++
T Consensus 232 ~~~~~~~~~~--~~~~~--------------~~--~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 232 KSLQRQANIL--LGACS--------------LD--CLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp STTTHHHHHH--TTCCC--------------CT--TSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhhHHHHHHH--hccCC--------------cc--ccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 5332221110 00000 00 00011223456889999999999999999999984
No 250
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.97 E-value=1.2e-31 Score=279.99 Aligned_cols=197 Identities=21% Similarity=0.341 Sum_probs=146.6
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCC------CCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCC
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCS------LDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKA 390 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~------l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp 390 (547)
|||||++++++.++...++|||||. |+|.+++...... .++..++.++.|++.||+||| +.+|+||||||
T Consensus 68 HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp 143 (434)
T 2rio_A 68 HPNVIRYYCSETTDRFLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKP 143 (434)
T ss_dssp STTBCCEEEEEECSSEEEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred CCCcCeEEEEEecCCeEEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCCh
Confidence 9999999999999999999999995 6999999875411 123346789999999999999 99999999999
Q ss_pred CcEEeCCC-------------CcEEEcccCCcccCCCCCc----ccccccCCCCCCCCCCCCC-------CCCCcchhHH
Q 047800 391 NNVLLDDN-------------MVAHLSDFGIAKTGEDQSM----TQTQTLATIGYMAPEYGRE-------GRVSANGDVY 446 (547)
Q Consensus 391 ~Nill~~~-------------~~~kl~Dfg~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~-------~~~~~~sDv~ 446 (547)
+||+++.+ +.+||+|||+++....... ......||+.|+|||++.+ ..++.++|||
T Consensus 144 ~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~Diw 223 (434)
T 2rio_A 144 QNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIF 223 (434)
T ss_dssp GGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHH
T ss_pred HhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhH
Confidence 99999654 4899999999986654321 1223479999999999875 5689999999
Q ss_pred HHHHHHHHHHh-CCCCCchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCC
Q 047800 447 SFGIMLMKTFI-GKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQR 525 (547)
Q Consensus 447 s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 525 (547)
|+||++|||++ |+.||.........+.. ... .........+..+++++.+++.+||+.||++|
T Consensus 224 SlG~il~ellt~g~~Pf~~~~~~~~~i~~---~~~-------------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 287 (434)
T 2rio_A 224 SMGCVFYYILSKGKHPFGDKYSRESNIIR---GIF-------------SLDEMKCLHDRSLIAEATDLISQMIDHDPLKR 287 (434)
T ss_dssp HHHHHHHHHHTTSCCTTCSTTTHHHHHHH---TCC-------------CCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGS
T ss_pred hHHHHHHHHHhCCCCCCCCchhhHHHHhc---CCC-------------CcccccccccccchHHHHHHHHHHhhCChhhC
Confidence 99999999998 99999764332211111 000 00000111123456789999999999999999
Q ss_pred CChHHHHH
Q 047800 526 INPKEIVT 533 (547)
Q Consensus 526 ps~~eil~ 533 (547)
||+.|+++
T Consensus 288 ps~~eil~ 295 (434)
T 2rio_A 288 PTAMKVLR 295 (434)
T ss_dssp CCHHHHHT
T ss_pred CCHHHHHh
Confidence 99999986
No 251
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.97 E-value=1.8e-31 Score=266.37 Aligned_cols=260 Identities=20% Similarity=0.292 Sum_probs=176.1
Q ss_pred CCeEeCCCCccc-cccCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhh
Q 047800 232 LDDLDLSFNKLE-GEILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRK 309 (547)
Q Consensus 232 L~~l~l~~N~l~-~~~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 309 (547)
.+.+.+.++... ....+.|.++.++......+. .++.+......... .....+..|+. +..++
T Consensus 20 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~-~vavK~~~~~~~~~-----------~~~~~~~~E~~~l~~l~--- 84 (313)
T 3cek_A 20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQ-IYAIKYVNLEEADN-----------QTLDSYRNEIAYLNKLQ--- 84 (313)
T ss_dssp CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCC-EEEEEEEECSSCCH-----------HHHHHHHHHHHHHHHHG---
T ss_pred eeeeeeccceEEEEEEecCCCCEEEEEEEcCCCc-EEEEEEeccccccc-----------cchHHHHHHHHHHHhcc---
Confidence 345555555444 234556788888776543322 23333110000000 00011445555 44554
Q ss_pred cCCCCCCCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCC
Q 047800 310 RGKRPSNDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIK 389 (547)
Q Consensus 310 ~~~~~~~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlk 389 (547)
.+||||+++++++..++..++||| +.+++|.+++.... .+++.++..++.|++.||+||| +.+|+|||||
T Consensus 85 -----~~~~~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlk 154 (313)
T 3cek_A 85 -----QHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLK 154 (313)
T ss_dssp -----GGCTTBCCEEEEEECSSEEEEEEC-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCC
T ss_pred -----ccCCceEEEEEEeecCCEEEEEEe-cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCC
Confidence 126999999999999999999999 45889999998764 6899999999999999999999 8999999999
Q ss_pred CCcEEeCCCCcEEEcccCCcccCCCCCc--ccccccCCCCCCCCCCCCC-----------CCCCcchhHHHHHHHHHHHH
Q 047800 390 ANNVLLDDNMVAHLSDFGIAKTGEDQSM--TQTQTLATIGYMAPEYGRE-----------GRVSANGDVYSFGIMLMKTF 456 (547)
Q Consensus 390 p~Nill~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDv~s~G~il~ell 456 (547)
|+||+++. +.+||+|||+++....... ......||+.|+|||++.+ ..++.++||||||+++|||+
T Consensus 155 p~NIl~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~ 233 (313)
T 3cek_A 155 PANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 233 (313)
T ss_dssp GGGEEEET-TEEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHH
T ss_pred cccEEEEC-CeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHH
Confidence 99999965 7999999999986543321 1223468999999999875 46888999999999999999
Q ss_pred hCCCCCchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHH
Q 047800 457 IGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRL 535 (547)
Q Consensus 457 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L 535 (547)
+|+.||............. .+...... .+...+.++.+++.+||..||++|||+.|+++.-
T Consensus 234 ~g~~pf~~~~~~~~~~~~~------------~~~~~~~~------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~ 294 (313)
T 3cek_A 234 YGKTPFQQIINQISKLHAI------------IDPNHEIE------FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 294 (313)
T ss_dssp HSSCTTTTCCSHHHHHHHH------------HCTTSCCC------CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred hCCCchhhHHHHHHHHHHH------------HhcccccC------CcccchHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence 9999997643322211111 11110000 0011134688999999999999999999998753
No 252
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.97 E-value=5.5e-32 Score=271.15 Aligned_cols=243 Identities=23% Similarity=0.252 Sum_probs=177.8
Q ss_pred cccCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCccc
Q 047800 244 GEILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISP 322 (547)
Q Consensus 244 ~~~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~ 322 (547)
....+.|.++.++......+...++.+............. .....+..|+. +..++ ..||||++
T Consensus 48 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~-------~~~~~~~~E~~~l~~l~--------~~~~~i~~ 112 (320)
T 3a99_A 48 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL-------PNGTRVPMEVVLLKKVS--------SGFSGVIR 112 (320)
T ss_dssp EEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEEC-------TTCCEEEHHHHHHHHHC--------SSSCSBCC
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhh-------hhhhHHHHHHHHHHhhc--------cCCCCceE
Confidence 3456678899998876555544555552211111110000 00000223333 44443 13799999
Q ss_pred cccccCccceeEEEEeccCC-CChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeC-CCCc
Q 047800 323 VATSCSNEEFKALILEYKPH-GSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD-DNMV 400 (547)
Q Consensus 323 l~~~~~~~~~~~lv~ey~~~-gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~-~~~~ 400 (547)
+++++..++..++|+||+.+ ++|.+++.... .+++..++.++.|++.||+||| +.+|+||||||+||+++ .++.
T Consensus 113 ~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~ 188 (320)
T 3a99_A 113 LLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGE 188 (320)
T ss_dssp EEEEEECSSEEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTE
T ss_pred EEEEEecCCcEEEEEEcCCCCccHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCC
Confidence 99999999999999999976 89999998754 6899999999999999999999 99999999999999999 7889
Q ss_pred EEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCC-CcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhhhhc
Q 047800 401 AHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDW 479 (547)
Q Consensus 401 ~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~ 479 (547)
+||+|||+++...... .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||.......
T Consensus 189 ~kL~Dfg~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~---------- 256 (320)
T 3a99_A 189 LKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII---------- 256 (320)
T ss_dssp EEECCCTTCEECCSSC--BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHH----------
T ss_pred EEEeeCcccccccccc--ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhh----------
Confidence 9999999998665432 234469999999999887665 688999999999999999999996531100
Q ss_pred cCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 480 LPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
...... +..+++++.+++.+||+.||++|||++|+++.
T Consensus 257 ---------~~~~~~--------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 257 ---------RGQVFF--------RQRVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp ---------HCCCCC--------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ---------cccccc--------cccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000 01124568899999999999999999999863
No 253
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.97 E-value=2.4e-31 Score=281.50 Aligned_cols=219 Identities=22% Similarity=0.175 Sum_probs=183.3
Q ss_pred CCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCCC
Q 047800 9 LHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRNL 88 (547)
Q Consensus 9 l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 88 (547)
+++|+.|+|++|.|++..|..|+++++|++|+|++|.|+ +..| +..+++|++|+|++|.|+++.+ .++|
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~----~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L 101 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLY----ETLD--LESLSTLRTLDLNNNYVQELLV-----GPSI 101 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCE----EEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTC
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCC----CCcc--cccCCCCCEEEecCCcCCCCCC-----CCCc
Confidence 348999999999999999999999999999999999998 3444 8899999999999999998543 2899
Q ss_pred CeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCCCCC
Q 047800 89 NELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGPL 168 (547)
Q Consensus 89 ~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~~~ 168 (547)
++|+|++|.|+++++. .+++|++|+|++|+|+++.+.. +++++ +|++|+|++|.+++.+
T Consensus 102 ~~L~L~~N~l~~~~~~--------~l~~L~~L~L~~N~l~~~~~~~-~~~l~------------~L~~L~Ls~N~l~~~~ 160 (487)
T 3oja_A 102 ETLHAANNNISRVSCS--------RGQGKKNIYLANNKITMLRDLD-EGCRS------------RVQYLDLKLNEIDTVN 160 (487)
T ss_dssp CEEECCSSCCCCEEEC--------CCSSCEEEECCSSCCCSGGGBC-GGGGS------------SEEEEECTTSCCCEEE
T ss_pred CEEECcCCcCCCCCcc--------ccCCCCEEECCCCCCCCCCchh-hcCCC------------CCCEEECCCCCCCCcC
Confidence 9999999999988765 3578999999999999887766 45555 8999999999999888
Q ss_pred CcCCC-CCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCCccccccC
Q 047800 169 PLEIG-NLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKLEGEIL 247 (547)
Q Consensus 169 p~~~~-~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 247 (547)
|..+. ++++|+.|+|++|.++ +. | .+..+++|+.|+|++|++++.+| .+..+++|+.|++++|.+++.+.
T Consensus 161 ~~~l~~~l~~L~~L~Ls~N~l~------~~-~-~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~lp~ 231 (487)
T 3oja_A 161 FAELAASSDTLEHLNLQYNFIY------DV-K-GQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVLIEK 231 (487)
T ss_dssp GGGGGGGTTTCCEEECTTSCCC------EE-E-CCCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCEECT
T ss_pred hHHHhhhCCcccEEecCCCccc------cc-c-ccccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcccch
Confidence 88876 7899999999999884 22 2 23358899999999999986555 48888999999999999987665
Q ss_pred CCCccCCcchhcccCcccccc
Q 047800 248 RGGSFGNFLVELFEGNKLLYG 268 (547)
Q Consensus 248 ~~~~~~~l~~l~l~~N~~~c~ 268 (547)
..+.+.++..+++.+|++.|+
T Consensus 232 ~l~~l~~L~~L~l~~N~l~c~ 252 (487)
T 3oja_A 232 ALRFSQNLEHFDLRGNGFHCG 252 (487)
T ss_dssp TCCCCTTCCEEECTTCCBCHH
T ss_pred hhccCCCCCEEEcCCCCCcCc
Confidence 556778888889999988865
No 254
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.97 E-value=1.5e-31 Score=266.78 Aligned_cols=186 Identities=25% Similarity=0.279 Sum_probs=150.4
Q ss_pred CCCCccccccccCccceeEEEEec-cCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEE
Q 047800 316 NDANISPVATSCSNEEFKALILEY-KPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey-~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nil 394 (547)
.||||+++++++...+..++|+|| +++++|.+++.... .+++..++.++.|++.||+||| +.+|+||||||+||+
T Consensus 96 ~h~~i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil 171 (312)
T 2iwi_A 96 GHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENIL 171 (312)
T ss_dssp CCSSBCCEEEEC-----CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEE
T ss_pred CCCCeeeEEEEEecCCeEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEE
Confidence 399999999999999999999999 78999999998754 6899999999999999999999 899999999999999
Q ss_pred eC-CCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCC-cchhHHHHHHHHHHHHhCCCCCchhhhhhhhh
Q 047800 395 LD-DNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVS-ANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTL 472 (547)
Q Consensus 395 l~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDv~s~G~il~elltg~~p~~~~~~~~~~~ 472 (547)
++ .++.+||+|||+++...... .....|+..|+|||++.+..+. .++||||+|+++|||++|+.||......
T Consensus 172 ~~~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---- 245 (312)
T 2iwi_A 172 IDLRRGCAKLIDFGSGALLHDEP--YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEI---- 245 (312)
T ss_dssp EETTTTEEEECCCSSCEECCSSC--BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH----
T ss_pred EeCCCCeEEEEEcchhhhcccCc--ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHH----
Confidence 99 88999999999998665432 2345689999999998876664 5899999999999999999999653110
Q ss_pred hhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 473 KHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
...... .+..++.++.+++.+||+.||++|||++|+++.
T Consensus 246 ---------------~~~~~~--------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 246 ---------------LEAELH--------FPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp ---------------HHTCCC--------CCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ---------------hhhccC--------CcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000 001224568899999999999999999999873
No 255
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.97 E-value=4.1e-31 Score=262.69 Aligned_cols=194 Identities=19% Similarity=0.234 Sum_probs=150.4
Q ss_pred CCCCcccccccc--CccceeEEEEeccCCCChhHHhhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCc
Q 047800 316 NDANISPVATSC--SNEEFKALILEYKPHGSLEKYLYSG-NCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANN 392 (547)
Q Consensus 316 ~H~nIv~l~~~~--~~~~~~~lv~ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~N 392 (547)
.||||+++++++ .+....++||||+++| +.+++... ...+++.++..++.|++.||+||| +++++|+||||+|
T Consensus 64 ~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~N 139 (305)
T 2wtk_C 64 RHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGN 139 (305)
T ss_dssp CCTTBCCEEEEEECC---CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGG
T ss_pred CCCCeeEEEEEEEcCCCCeEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCccc
Confidence 499999999998 4456889999999876 77777653 346999999999999999999999 9999999999999
Q ss_pred EEeCCCCcEEEcccCCcccCCCC--CcccccccCCCCCCCCCCCCCCC--CCcchhHHHHHHHHHHHHhCCCCCchhhhh
Q 047800 393 VLLDDNMVAHLSDFGIAKTGEDQ--SMTQTQTLATIGYMAPEYGREGR--VSANGDVYSFGIMLMKTFIGKKPTDEIFNE 468 (547)
Q Consensus 393 ill~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDv~s~G~il~elltg~~p~~~~~~~ 468 (547)
|+++.++.+|++|||.+...... ........||+.|+|||++.+.. ++.++||||+|+++|||++|+.||......
T Consensus 140 Il~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~ 219 (305)
T 2wtk_C 140 LLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY 219 (305)
T ss_dssp EEECTTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred EEEcCCCcEEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH
Confidence 99999999999999999765422 11223446899999999987654 478999999999999999999999763222
Q ss_pred hhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 469 EMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
.. ... +..... ..+..+++.+.+++.+||..||++|||++|+++.
T Consensus 220 ~~-~~~-------------i~~~~~-------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 220 KL-FEN-------------IGKGSY-------AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp HH-HHH-------------HHHCCC-------CCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred HH-HHH-------------HhcCCC-------CCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11 000 000000 0011234568899999999999999999999875
No 256
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.97 E-value=4.3e-31 Score=270.26 Aligned_cols=212 Identities=16% Similarity=0.213 Sum_probs=155.0
Q ss_pred CCCCccccccccCccc----eeEEEEeccCCCChhHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCC-CccccCCC
Q 047800 316 NDANISPVATSCSNEE----FKALILEYKPHGSLEKYLYSGN-CSLDIFQRLNSMIDVALALEYMHFGYSA-PVIHCDIK 389 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~----~~~lv~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~-~i~H~dlk 389 (547)
.||||+++++++...+ ..++||||+ +++|.+++.... ..+++..+..++.|++.||+||| ++ +|+|||||
T Consensus 84 ~~~~i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dik 159 (373)
T 1q8y_A 84 GANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIK 159 (373)
T ss_dssp HHTTBCCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCS
T ss_pred ccchHHHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCC
Confidence 3999999999988654 789999999 889999998743 45999999999999999999999 87 99999999
Q ss_pred CCcEEeC------CCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCc
Q 047800 390 ANNVLLD------DNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTD 463 (547)
Q Consensus 390 p~Nill~------~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~ 463 (547)
|+||+++ ..+.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 160 p~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 236 (373)
T 1q8y_A 160 PENVLMEIVDSPENLIQIKIADLGNACWYDEH---YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFE 236 (373)
T ss_dssp GGGEEEEEEETTTTEEEEEECCCTTCEETTBC---CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC-
T ss_pred hHHeEEeccCCCcCcceEEEcccccccccCCC---CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence 9999994 4458999999999765432 233478999999999999899999999999999999999999997
Q ss_pred hhhhh-----hhhhhhhhhh--ccCchhh-------hhhhhh-------------hccchhhhhhcHHHHHHHHHHHHhh
Q 047800 464 EIFNE-----EMTLKHWVND--WLPISIM-------EVIDAN-------------LLSREDIHFVAKEQFMSFVFNLAME 516 (547)
Q Consensus 464 ~~~~~-----~~~~~~~~~~--~~~~~~~-------~~~~~~-------------~~~~~~~~~~~~~~~~~~l~~li~~ 516 (547)
..... ...+...... ..+.... ..+... ...........+...+.++.+++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 316 (373)
T 1q8y_A 237 PDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSP 316 (373)
T ss_dssp --------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGG
T ss_pred CCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHH
Confidence 64321 1111111110 0000000 000000 0000000111234567889999999
Q ss_pred hcCcCCCCCCChHHHHHH
Q 047800 517 CTVESPEQRINPKEIVTR 534 (547)
Q Consensus 517 cl~~dp~~Rps~~eil~~ 534 (547)
||+.||++|||+.|+++.
T Consensus 317 ~L~~dP~~Rpt~~ell~h 334 (373)
T 1q8y_A 317 MLQLDPRKRADAGGLVNH 334 (373)
T ss_dssp GGCSSTTTCBCHHHHHTC
T ss_pred HhccCccccCCHHHHhhC
Confidence 999999999999999863
No 257
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.97 E-value=3.4e-30 Score=280.83 Aligned_cols=252 Identities=21% Similarity=0.182 Sum_probs=142.0
Q ss_pred ccCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCC-cccc
Q 047800 5 EIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIP-NTFG 83 (547)
Q Consensus 5 ~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~ 83 (547)
.|+++++|+.|+|++|+|+ .+|..+.++++|++|+|++|+++ +..|..+.++++|++|++++|.+++..| ..|.
T Consensus 273 ~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~----~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~ 347 (606)
T 3t6q_A 273 TFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFE----NLCQISASNFPSLTHLSIKGNTKRLELGTGCLE 347 (606)
T ss_dssp TTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCS----BGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTT
T ss_pred HhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcC----cCchhhhhccCcCCEEECCCCCcccccchhhhh
Confidence 3555666666666666655 34555555666666666666555 2334444555555555555555543222 2345
Q ss_pred CCCCCCeeecccccccccc--CchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCc-------------chhhhcc
Q 047800 84 NLRNLNELALHNNYLTSST--LELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSH-------------SLEFFVM 148 (547)
Q Consensus 84 ~l~~L~~L~L~~N~i~~~~--~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~-------------~~~~~~~ 148 (547)
.+++|++|++++|.+++.. +. .+.++++|++|++++|+++++.+.. +..++. ......+
T Consensus 348 ~l~~L~~L~l~~n~l~~~~~~~~-----~~~~l~~L~~L~l~~n~l~~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~ 421 (606)
T 3t6q_A 348 NLENLRELDLSHDDIETSDCCNL-----QLRNLSHLQSLNLSYNEPLSLKTEA-FKECPQLELLDLAFTRLKVKDAQSPF 421 (606)
T ss_dssp TCTTCCEEECCSSCCCEEEESTT-----TTTTCTTCCEEECCSCSCEEECTTT-TTTCTTCSEEECTTCCEECCTTCCTT
T ss_pred ccCcCCEEECCCCccccccCcch-----hcccCCCCCEEECCCCcCCcCCHHH-hcCCccCCeEECCCCcCCCcccchhh
Confidence 5555555555555554443 22 3444555555555555554444333 111110 0001124
Q ss_pred ccCCcccEEEccCCcCCCCCCcCCCCCccccccccccccccC---------------------ccccCCCCCcchhcCCC
Q 047800 149 SYCNDILYLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSG---------------------YNKLQGSIPESFGDLSN 207 (547)
Q Consensus 149 ~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~---------------------~n~l~~~~p~~~~~l~~ 207 (547)
+.+++|+.|++++|.+++..|..|.++++|+.|++++|.+++ .|.+++..|..|..+++
T Consensus 422 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 501 (606)
T 3t6q_A 422 QNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKM 501 (606)
T ss_dssp TTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred hCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccC
Confidence 445578888888888887777778888888888888887642 03345555666666666
Q ss_pred CCEEECcCCcCCCCCCcchhCCCCCCeEeCCCCccccccCCC-CccCCcchhcccCcccccc
Q 047800 208 NNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKLEGEILRG-GSFGNFLVELFEGNKLLYG 268 (547)
Q Consensus 208 L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~c~ 268 (547)
|+.|+|++|++++..|..+..++.| .|++++|++++.++.. ..+.+++.+++.+|++.|.
T Consensus 502 L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 562 (606)
T 3t6q_A 502 MNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCT 562 (606)
T ss_dssp CCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECS
T ss_pred CCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCcccc
Confidence 6666666666666666666666666 6666666666555443 4455666666677766653
No 258
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.97 E-value=3.2e-30 Score=265.61 Aligned_cols=242 Identities=19% Similarity=0.176 Sum_probs=162.7
Q ss_pred cCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCC
Q 047800 6 IGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNL 85 (547)
Q Consensus 6 ~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 85 (547)
|+++++|++|+|++|+|+++.+..|.++++|++|+|++|.++ +..|..|.++++|++|+|++|+|+.+.+..|.++
T Consensus 65 ~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~----~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l 140 (390)
T 3o6n_A 65 LDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIR----YLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNT 140 (390)
T ss_dssp HHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC----CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred hcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCC----cCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCC
Confidence 577888888888888888877788888888888888888888 4556667788888888888888888666667888
Q ss_pred CCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccC---------------cchhh-----
Q 047800 86 RNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLS---------------HSLEF----- 145 (547)
Q Consensus 86 ~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~---------------~~~~~----- 145 (547)
++|++|+|++|+++++++. .|.++++|++|++++|+++++.... +.++. ..+..
T Consensus 141 ~~L~~L~L~~n~l~~~~~~-----~~~~l~~L~~L~l~~n~l~~~~~~~-l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~ 214 (390)
T 3o6n_A 141 PKLTTLSMSNNNLERIEDD-----TFQATTSLQNLQLSSNRLTHVDLSL-IPSLFHANVSYNLLSTLAIPIAVEELDASH 214 (390)
T ss_dssp TTCCEEECCSSCCCBCCTT-----TTSSCTTCCEEECCSSCCSBCCGGG-CTTCSEEECCSSCCSEEECCSSCSEEECCS
T ss_pred CCCcEEECCCCccCccChh-----hccCCCCCCEEECCCCcCCcccccc-ccccceeecccccccccCCCCcceEEECCC
Confidence 8888888888888888776 7888888888888888888764332 11111 00000
Q ss_pred ---------------------------hccccCCcccEEEccCCcCCCCCCcCCCCCccccccccccccccCccccCCCC
Q 047800 146 ---------------------------FVMSYCNDILYLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSI 198 (547)
Q Consensus 146 ---------------------------~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~ 198 (547)
..++.+++|++|++++|.+++..|..|.++++|+.|++++|.++ .+
T Consensus 215 n~l~~~~~~~~~~L~~L~l~~n~l~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-------~~ 287 (390)
T 3o6n_A 215 NSINVVRGPVNVELTILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-------AL 287 (390)
T ss_dssp SCCCEEECCCCSSCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCC-------EE
T ss_pred CeeeeccccccccccEEECCCCCCcccHHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCc-------cc
Confidence 12344455666666666666555556666666666666666553 23
Q ss_pred CcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCCccccccCCCCccCCcchhcccCccccc
Q 047800 199 PESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKLEGEILRGGSFGNFLVELFEGNKLLY 267 (547)
Q Consensus 199 p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~c 267 (547)
|..+..+++|++|+|++|+++ .+|..+..+++|+.|++++|+++... ...+.+++.+++.+|++.|
T Consensus 288 ~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~--~~~~~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 288 NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK--LSTHHTLKNLTLSHNDWDC 353 (390)
T ss_dssp ECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC--CCTTCCCSEEECCSSCEEH
T ss_pred CcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccceeC--chhhccCCEEEcCCCCccc
Confidence 444455666666666666665 34445556666666666666665442 2345566666666666655
No 259
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.97 E-value=6.1e-30 Score=270.66 Aligned_cols=254 Identities=21% Similarity=0.197 Sum_probs=210.7
Q ss_pred CCcccCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCcc
Q 047800 2 IPPEIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNT 81 (547)
Q Consensus 2 ip~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 81 (547)
||..+. ++|+.|+|++|+|+++.+..|.++++|++|+|++|.|+ +..|..|.++++|++|+|++|+|+.+.+..
T Consensus 26 ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~----~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 99 (477)
T 2id5_A 26 VPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVS----AVEPGAFNNLFNLRTLGLRSNRLKLIPLGV 99 (477)
T ss_dssp CCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCC----EECTTTTTTCTTCCEEECCSSCCCSCCTTS
T ss_pred CCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccC----EeChhhhhCCccCCEEECCCCcCCccCccc
Confidence 566553 68999999999999999999999999999999999999 566889999999999999999999988888
Q ss_pred ccCCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccC------------cchhhhccc
Q 047800 82 FGNLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLS------------HSLEFFVMS 149 (547)
Q Consensus 82 ~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~------------~~~~~~~~~ 149 (547)
|.++++|++|+|++|+++++++. .|.++++|++|+|++|+++++.+.. +.+++ ..+....++
T Consensus 100 ~~~l~~L~~L~Ls~n~i~~~~~~-----~~~~l~~L~~L~l~~n~l~~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~l~ 173 (477)
T 2id5_A 100 FTGLSNLTKLDISENKIVILLDY-----MFQDLYNLKSLEVGDNDLVYISHRA-FSGLNSLEQLTLEKCNLTSIPTEALS 173 (477)
T ss_dssp STTCTTCCEEECTTSCCCEECTT-----TTTTCTTCCEEEECCTTCCEECTTS-STTCTTCCEEEEESCCCSSCCHHHHT
T ss_pred ccCCCCCCEEECCCCccccCChh-----HccccccCCEEECCCCccceeChhh-ccCCCCCCEEECCCCcCcccChhHhc
Confidence 99999999999999999999887 8999999999999999999988766 33333 122333477
Q ss_pred cCCcccEEEccCCcCCCCCCcCCCCCccccccccccccccC------------------ccccCCCCCcchhcCCCCCEE
Q 047800 150 YCNDILYLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSG------------------YNKLQGSIPESFGDLSNNNTL 211 (547)
Q Consensus 150 ~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~------------------~n~l~~~~p~~~~~l~~L~~L 211 (547)
.+++|+.|+|++|.+++..+..|.++++|+.|++++|.+.+ .|.+++..+..|..+++|+.|
T Consensus 174 ~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 253 (477)
T 2id5_A 174 HLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFL 253 (477)
T ss_dssp TCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEE
T ss_pred ccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCee
Confidence 78889999999998888877888888888888888875431 145555544678888888888
Q ss_pred ECcCCcCCCCCCcchhCCCCCCeEeCCCCccccccCCC-CccCCcchhcccCccccc
Q 047800 212 NLSNNNLSGAIPISLEKLSYLDDLDLSFNKLEGEILRG-GSFGNFLVELFEGNKLLY 267 (547)
Q Consensus 212 ~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~c 267 (547)
+|++|++++..+..|..+++|+.|++++|++++..+.. ..+.+++.+++.+|.+..
T Consensus 254 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 310 (477)
T 2id5_A 254 NLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTT 310 (477)
T ss_dssp ECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSC
T ss_pred ECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCce
Confidence 88888888777778888888888888888888776655 567788888888887653
No 260
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=1.9e-29 Score=253.70 Aligned_cols=237 Identities=22% Similarity=0.282 Sum_probs=141.2
Q ss_pred CCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCCCC
Q 047800 10 HNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRNLN 89 (547)
Q Consensus 10 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 89 (547)
++|+.|+|++|+|+++.+..|.++++|++|+|++|+|+ +..|..|.++++|++|+|++|+|+. +|..+. ++|+
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~----~~~~~~~~~l~~L~~L~Ls~n~l~~-l~~~~~--~~L~ 124 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKIS----KISPGAFAPLVKLERLYLSKNQLKE-LPEKMP--KTLQ 124 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCC----CBCTTTTTTCTTCCEEECCSSCCSB-CCSSCC--TTCC
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCC----eeCHHHhcCCCCCCEEECCCCcCCc-cChhhc--cccc
Confidence 45666666666666555555666666666666666665 3345556666666666666666655 333322 4555
Q ss_pred eeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCC--CCCcccccccCcchhhhc----------cccCCcccEE
Q 047800 90 ELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDG--ILHRTYMGNLSHSLEFFV----------MSYCNDILYL 157 (547)
Q Consensus 90 ~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~~l~~~~~~~~----------~~~~~~L~~L 157 (547)
+|++++|+++++++. .|.++++|++|++++|+++. +.+.. +..++ .+.... ....++|++|
T Consensus 125 ~L~l~~n~l~~~~~~-----~~~~l~~L~~L~l~~n~l~~~~~~~~~-~~~l~-~L~~L~l~~n~l~~l~~~~~~~L~~L 197 (330)
T 1xku_A 125 ELRVHENEITKVRKS-----VFNGLNQMIVVELGTNPLKSSGIENGA-FQGMK-KLSYIRIADTNITTIPQGLPPSLTEL 197 (330)
T ss_dssp EEECCSSCCCBBCHH-----HHTTCTTCCEEECCSSCCCGGGBCTTG-GGGCT-TCCEEECCSSCCCSCCSSCCTTCSEE
T ss_pred EEECCCCcccccCHh-----HhcCCccccEEECCCCcCCccCcChhh-ccCCC-CcCEEECCCCccccCCccccccCCEE
Confidence 555555555555544 45555555555555555542 22222 22221 000000 0011367777
Q ss_pred EccCCcCCCCCCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeC
Q 047800 158 DLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDL 237 (547)
Q Consensus 158 ~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l 237 (547)
++++|++++..|..|.++++|+.|++++|.+ ++..++.|..+++|+.|+|++|+++ .+|..+..+++|+.|++
T Consensus 198 ~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l------~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l 270 (330)
T 1xku_A 198 HLDGNKITKVDAASLKGLNNLAKLGLSFNSI------SAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYL 270 (330)
T ss_dssp ECTTSCCCEECTGGGTTCTTCCEEECCSSCC------CEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEEC
T ss_pred ECCCCcCCccCHHHhcCCCCCCEEECCCCcC------ceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEEC
Confidence 7777777766677777777777777777777 4455567777778888888888777 56667777777888888
Q ss_pred CCCccccccCCCC-------ccCCcchhcccCccccc
Q 047800 238 SFNKLEGEILRGG-------SFGNFLVELFEGNKLLY 267 (547)
Q Consensus 238 ~~N~l~~~~~~~~-------~~~~l~~l~l~~N~~~c 267 (547)
++|++++..+... ....+..+++.+|++.+
T Consensus 271 ~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~ 307 (330)
T 1xku_A 271 HNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQY 307 (330)
T ss_dssp CSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCG
T ss_pred CCCcCCccChhhcCCcccccccccccceEeecCcccc
Confidence 8887776544331 13455667777777754
No 261
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=2.4e-29 Score=253.31 Aligned_cols=243 Identities=21% Similarity=0.246 Sum_probs=181.7
Q ss_pred CCcccCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCcc
Q 047800 2 IPPEIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNT 81 (547)
Q Consensus 2 ip~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 81 (547)
+|..+. ++|+.|+|++|+|+++.|..|.++++|++|+|++|+|+ +..|..|.++++|++|+|++|+|+. +|..
T Consensus 48 ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~----~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~ 120 (332)
T 2ft3_A 48 VPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKIS----KIHEKAFSPLRKLQKLYISKNHLVE-IPPN 120 (332)
T ss_dssp CCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC----EECGGGSTTCTTCCEEECCSSCCCS-CCSS
T ss_pred cCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccC----ccCHhHhhCcCCCCEEECCCCcCCc-cCcc
Confidence 455443 57788888888887777777888888888888888777 4556777777888888888888776 3443
Q ss_pred ccCCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCC--CCCcccccccCcchhhhcc----------c
Q 047800 82 FGNLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDG--ILHRTYMGNLSHSLEFFVM----------S 149 (547)
Q Consensus 82 ~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~~l~~~~~~~~~----------~ 149 (547)
+. ++|++|++++|+|+++++. .|.++++|++|++++|+++. +.+.. +..+ .+....+ .
T Consensus 121 ~~--~~L~~L~l~~n~i~~~~~~-----~~~~l~~L~~L~l~~n~l~~~~~~~~~-~~~l--~L~~L~l~~n~l~~l~~~ 190 (332)
T 2ft3_A 121 LP--SSLVELRIHDNRIRKVPKG-----VFSGLRNMNCIEMGGNPLENSGFEPGA-FDGL--KLNYLRISEAKLTGIPKD 190 (332)
T ss_dssp CC--TTCCEEECCSSCCCCCCSG-----GGSSCSSCCEEECCSCCCBGGGSCTTS-SCSC--CCSCCBCCSSBCSSCCSS
T ss_pred cc--ccCCEEECCCCccCccCHh-----HhCCCccCCEEECCCCccccCCCCccc-ccCC--ccCEEECcCCCCCccCcc
Confidence 33 6777788888877777766 67777778888887777753 33333 2222 1111111 1
Q ss_pred cCCcccEEEccCCcCCCCCCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCC
Q 047800 150 YCNDILYLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKL 229 (547)
Q Consensus 150 ~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 229 (547)
..++|++|++++|.+++..+..|.++++|+.|++++|.+ ++..+..|..+++|+.|+|++|+++ .+|..+..+
T Consensus 191 ~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l------~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l 263 (332)
T 2ft3_A 191 LPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQI------RMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDL 263 (332)
T ss_dssp SCSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCC------CCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGC
T ss_pred ccCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcC------CcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcC
Confidence 124899999999999988888999999999999999988 5677778999999999999999998 677789999
Q ss_pred CCCCeEeCCCCccccccCCCC-------ccCCcchhcccCcccccc
Q 047800 230 SYLDDLDLSFNKLEGEILRGG-------SFGNFLVELFEGNKLLYG 268 (547)
Q Consensus 230 ~~L~~l~l~~N~l~~~~~~~~-------~~~~l~~l~l~~N~~~c~ 268 (547)
++|+.|++++|++++..+... .+..+..+++.+|++.+.
T Consensus 264 ~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~ 309 (332)
T 2ft3_A 264 KLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYW 309 (332)
T ss_dssp TTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGG
T ss_pred ccCCEEECCCCCCCccChhHccccccccccccccceEeecCccccc
Confidence 999999999999997655431 145677889999998743
No 262
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=1.3e-30 Score=264.73 Aligned_cols=236 Identities=17% Similarity=0.167 Sum_probs=204.0
Q ss_pred CCcccCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCcc
Q 047800 2 IPPEIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNT 81 (547)
Q Consensus 2 ip~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 81 (547)
||..+. ++|++|+|++|+|+++.+..|.++++|++|+|++|+|+ +..|..|.++++|++|+|++|+|+++.+..
T Consensus 46 iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~----~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~ 119 (353)
T 2z80_A 46 IPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGIN----TIEEDSFSSLGSLEHLDLSYNYLSNLSSSW 119 (353)
T ss_dssp CCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCC----EECTTTTTTCTTCCEEECCSSCCSSCCHHH
T ss_pred cccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccC----ccCHhhcCCCCCCCEEECCCCcCCcCCHhH
Confidence 566554 58999999999999888889999999999999999999 456778999999999999999999977777
Q ss_pred ccCCCCCCeeeccccccccccC-chhhHhhhcCCCCCcEEeCcCC-CCCCCCCcccccccCcchhhhccccCCcccEEEc
Q 047800 82 FGNLRNLNELALHNNYLTSSTL-ELSFLSLLLNCKSLTHIGLSNN-PLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDL 159 (547)
Q Consensus 82 ~~~l~~L~~L~L~~N~i~~~~~-~~~~~~~~~~l~~L~~L~Ls~N-~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~l 159 (547)
|+++++|++|+|++|+++.++. . .|.++++|++|++++| .++.+.+.. +.+++ +|++|++
T Consensus 120 ~~~l~~L~~L~L~~n~l~~l~~~~-----~~~~l~~L~~L~l~~n~~~~~~~~~~-~~~l~------------~L~~L~l 181 (353)
T 2z80_A 120 FKPLSSLTFLNLLGNPYKTLGETS-----LFSHLTKLQILRVGNMDTFTKIQRKD-FAGLT------------FLEELEI 181 (353)
T ss_dssp HTTCTTCSEEECTTCCCSSSCSSC-----SCTTCTTCCEEEEEESSSCCEECTTT-TTTCC------------EEEEEEE
T ss_pred hCCCccCCEEECCCCCCcccCchh-----hhccCCCCcEEECCCCccccccCHHH-ccCCC------------CCCEEEC
Confidence 9999999999999999999887 5 6889999999999999 577776655 45555 9999999
Q ss_pred cCCcCCCCCCcCCCCCccccccccccccccCccccCCCCCc-chhcCCCCCEEECcCCcCCCCC----------------
Q 047800 160 SSNFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPE-SFGDLSNNNTLNLSNNNLSGAI---------------- 222 (547)
Q Consensus 160 s~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~-~~~~l~~L~~L~l~~N~l~~~~---------------- 222 (547)
++|.+++..|..|.++++|+.|++++|.++ .+|. .+..+++|+.|++++|++++..
T Consensus 182 ~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~-------~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l 254 (353)
T 2z80_A 182 DASDLQSYEPKSLKSIQNVSHLILHMKQHI-------LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKF 254 (353)
T ss_dssp EETTCCEECTTTTTTCSEEEEEEEECSCST-------THHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEE
T ss_pred CCCCcCccCHHHHhccccCCeecCCCCccc-------cchhhhhhhcccccEEECCCCccccccccccccccccchhhcc
Confidence 999999888999999999999999999984 4444 4556899999999999998643
Q ss_pred ---------------CcchhCCCCCCeEeCCCCccccccCCC-CccCCcchhcccCcccccc
Q 047800 223 ---------------PISLEKLSYLDDLDLSFNKLEGEILRG-GSFGNFLVELFEGNKLLYG 268 (547)
Q Consensus 223 ---------------~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~c~ 268 (547)
|.++..+++|+.|++++|+++..+... ..+.+++.+++.+|++.|.
T Consensus 255 ~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~ 316 (353)
T 2z80_A 255 TFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 316 (353)
T ss_dssp EEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred ccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCc
Confidence 445788999999999999999766554 6788999999999999875
No 263
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.97 E-value=1.2e-29 Score=266.74 Aligned_cols=238 Identities=21% Similarity=0.241 Sum_probs=186.1
Q ss_pred CCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCC-CccccCCCCCcEEEccCCcccccCCccccCCCCC
Q 047800 10 HNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTI-PRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRNL 88 (547)
Q Consensus 10 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 88 (547)
++|++|+|++|+|+++.|..|+++++|++|+|++|.+. +.+ |..|.++++|++|+|++|+|+++.|..|+++++|
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~----~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 105 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPG----LVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANL 105 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTT----CEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTC
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCccc----ceECcccccccccCCEEeCCCCccCccChhhccCcccC
Confidence 78999999999999999999999999999999999997 566 4678899999999999999999899999999999
Q ss_pred CeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCCCCC
Q 047800 89 NELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGPL 168 (547)
Q Consensus 89 ~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~~~ 168 (547)
++|+|++|++++..+. ...|..+++|++|+|++|+|+++.+..++.+++ +|++|++++|.+++..
T Consensus 106 ~~L~L~~n~l~~~~~~---~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~------------~L~~L~L~~n~l~~~~ 170 (455)
T 3v47_A 106 EVLTLTQCNLDGAVLS---GNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMR------------RFHVLDLTFNKVKSIC 170 (455)
T ss_dssp CEEECTTSCCBTHHHH---SSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCT------------TCCEEECTTCCBSCCC
T ss_pred CEEeCCCCCCCccccC---cccccCcccCCEEECCCCccCccCcccccCCCC------------cccEEeCCCCcccccC
Confidence 9999999999874332 015889999999999999999998776566666 7888888888887777
Q ss_pred CcCCCCC----------------------------------ccccccccccccccC------------------------
Q 047800 169 PLEIGNL----------------------------------KGLVGVDFSMNNFSG------------------------ 190 (547)
Q Consensus 169 p~~~~~l----------------------------------~~L~~L~ls~N~~~~------------------------ 190 (547)
|..+..+ ++|+.|++++|.+++
T Consensus 171 ~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~ 250 (455)
T 3v47_A 171 EEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSY 250 (455)
T ss_dssp TTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCT
T ss_pred hhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeecccc
Confidence 7666543 567788888776531
Q ss_pred ---------------------------------ccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeC
Q 047800 191 ---------------------------------YNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDL 237 (547)
Q Consensus 191 ---------------------------------~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l 237 (547)
.|.+++..|+.|..+++|+.|+|++|++++..|..|..+++|+.|++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 330 (455)
T 3v47_A 251 NMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNL 330 (455)
T ss_dssp TTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEEC
Confidence 13344455666666777777777777777666666777777777777
Q ss_pred CCCccccccCCC-CccCCcchhcccCcccc
Q 047800 238 SFNKLEGEILRG-GSFGNFLVELFEGNKLL 266 (547)
Q Consensus 238 ~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~ 266 (547)
++|++++..+.. ..+.+++.+++.+|.+.
T Consensus 331 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 360 (455)
T 3v47_A 331 SQNFLGSIDSRMFENLDKLEVLDLSYNHIR 360 (455)
T ss_dssp CSSCCCEECGGGGTTCTTCCEEECCSSCCC
T ss_pred CCCccCCcChhHhcCcccCCEEECCCCccc
Confidence 777776554444 45666666777776653
No 264
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=9.2e-30 Score=255.65 Aligned_cols=230 Identities=19% Similarity=0.211 Sum_probs=190.8
Q ss_pred CCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCC
Q 047800 8 NLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRN 87 (547)
Q Consensus 8 ~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 87 (547)
...+++.|+|++|+|+ .+|..+.++++|++|+|++|.|+ .+|..++++++|++|+|++|+|+. +|..|+++++
T Consensus 79 ~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-----~lp~~~~~l~~L~~L~Ls~n~l~~-lp~~l~~l~~ 151 (328)
T 4fcg_A 79 TQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-----ELPDTMQQFAGLETLTLARNPLRA-LPASIASLNR 151 (328)
T ss_dssp TSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-----CCCSCGGGGTTCSEEEEESCCCCC-CCGGGGGCTT
T ss_pred cccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-----chhHHHhccCCCCEEECCCCcccc-CcHHHhcCcC
Confidence 3578999999999998 66777888999999999999998 889999999999999999999995 7888999999
Q ss_pred CCeeeccccccccccCchh----hHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCc
Q 047800 88 LNELALHNNYLTSSTLELS----FLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNF 163 (547)
Q Consensus 88 L~~L~L~~N~i~~~~~~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~ 163 (547)
|++|+|++|++.+..+... ..+.|.++++|++|+|++|+|+.++. . +.+++ +|++|+|++|+
T Consensus 152 L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~lp~-~-l~~l~------------~L~~L~L~~N~ 217 (328)
T 4fcg_A 152 LRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIRSLPA-S-IANLQ------------NLKSLKIRNSP 217 (328)
T ss_dssp CCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCCCCCG-G-GGGCT------------TCCEEEEESSC
T ss_pred CCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcCcchH-h-hcCCC------------CCCEEEccCCC
Confidence 9999999987766655400 00113458999999999999985543 3 45555 89999999999
Q ss_pred CCCCCCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCCccc
Q 047800 164 LTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKLE 243 (547)
Q Consensus 164 l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~ 243 (547)
+++ +|..+.++++|+.|++++|.+ .+.+|..|+.+++|+.|+|++|++.+.+|..+..+++|+.|++++|++.
T Consensus 218 l~~-l~~~l~~l~~L~~L~Ls~n~~------~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~ 290 (328)
T 4fcg_A 218 LSA-LGPAIHHLPKLEELDLRGCTA------LRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNL 290 (328)
T ss_dssp CCC-CCGGGGGCTTCCEEECTTCTT------CCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTC
T ss_pred CCc-CchhhccCCCCCEEECcCCcc------hhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCch
Confidence 995 566789999999999999888 5788999999999999999999998899999999999999999999988
Q ss_pred cccCCC-CccCCcchhcccCccc
Q 047800 244 GEILRG-GSFGNFLVELFEGNKL 265 (547)
Q Consensus 244 ~~~~~~-~~~~~l~~l~l~~N~~ 265 (547)
+..|.. +.+.++..+.+..|..
T Consensus 291 ~~iP~~l~~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 291 SRLPSLIAQLPANCIILVPPHLQ 313 (328)
T ss_dssp CCCCGGGGGSCTTCEEECCGGGS
T ss_pred hhccHHHhhccCceEEeCCHHHH
Confidence 887766 6677777777776654
No 265
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=8.8e-30 Score=276.81 Aligned_cols=243 Identities=19% Similarity=0.189 Sum_probs=174.5
Q ss_pred cCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCC
Q 047800 6 IGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNL 85 (547)
Q Consensus 6 ~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 85 (547)
|+++++|+.|+|++|.|+++.|..|+++++|++|+|++|.|+ +..|..|+++++|++|+|++|.|+++++..|+++
T Consensus 71 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~----~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l 146 (597)
T 3oja_B 71 LDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIR----YLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNT 146 (597)
T ss_dssp HHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC----CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred HccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCC----CCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccC
Confidence 577888999999999998888888999999999999999888 4556677888999999999999988777778889
Q ss_pred CCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCc---------------chh------
Q 047800 86 RNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSH---------------SLE------ 144 (547)
Q Consensus 86 ~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~---------------~~~------ 144 (547)
++|++|+|++|.|+++++. .|.++++|++|+|++|+|+++.... +.++.. ++.
T Consensus 147 ~~L~~L~Ls~N~l~~~~~~-----~~~~l~~L~~L~L~~N~l~~~~~~~-l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~ 220 (597)
T 3oja_B 147 PKLTTLSMSNNNLERIEDD-----TFQATTSLQNLQLSSNRLTHVDLSL-IPSLFHANVSYNLLSTLAIPIAVEELDASH 220 (597)
T ss_dssp TTCCEEECCSSCCCBCCTT-----TTTTCTTCCEEECTTSCCSBCCGGG-CTTCSEEECCSSCCSEEECCTTCSEEECCS
T ss_pred CCCCEEEeeCCcCCCCChh-----hhhcCCcCcEEECcCCCCCCcChhh-hhhhhhhhcccCccccccCCchhheeeccC
Confidence 9999999999999888877 7888889999999999888765433 222110 000
Q ss_pred --------------------------hhccccCCcccEEEccCCcCCCCCCcCCCCCccccccccccccccCccccCCCC
Q 047800 145 --------------------------FFVMSYCNDILYLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSI 198 (547)
Q Consensus 145 --------------------------~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~ 198 (547)
...++.+++|+.|+|++|.+++.+|..|+++++|+.|+|++|.++ .+
T Consensus 221 n~l~~~~~~~~~~L~~L~L~~n~l~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-------~l 293 (597)
T 3oja_B 221 NSINVVRGPVNVELTILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-------AL 293 (597)
T ss_dssp SCCCEEECSCCSCCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCC-------EE
T ss_pred CcccccccccCCCCCEEECCCCCCCCChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCC-------CC
Confidence 112445566666666666666666666666666666666666664 24
Q ss_pred CcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCCccccccCCCCccCCcchhcccCcccccc
Q 047800 199 PESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKLEGEILRGGSFGNFLVELFEGNKLLYG 268 (547)
Q Consensus 199 p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~c~ 268 (547)
|..+..+++|+.|+|++|.++ .+|..+..+++|+.|++++|++.+.. ...+.++..+++.+|++.|.
T Consensus 294 ~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 294 NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK--LSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp ECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC--CCTTCCCSEEECCSSCEEHH
T ss_pred CcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC--hhhcCCCCEEEeeCCCCCCh
Confidence 555556667777777777776 45555666677777777777766543 24456667777777776654
No 266
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=6.3e-30 Score=254.44 Aligned_cols=240 Identities=21% Similarity=0.242 Sum_probs=203.4
Q ss_pred CCcc-cCCCCCCcEEEccCCccccC--CChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccC
Q 047800 2 IPPE-IGNLHNLEYLGFGHNKLVGV--VPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFI 78 (547)
Q Consensus 2 ip~~-~~~l~~L~~L~Ls~N~i~~~--~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 78 (547)
+|.. |+++++|+.|+|++|+|+.. .+..+.++++|++|+|++|.++ .+|..+.++++|++|+|++|+++++.
T Consensus 43 i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-----~l~~~~~~l~~L~~L~l~~n~l~~~~ 117 (306)
T 2z66_A 43 LPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-----TMSSNFLGLEQLEHLDFQHSNLKQMS 117 (306)
T ss_dssp CCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-----EEEEEEETCTTCCEEECTTSEEESST
T ss_pred cCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-----cChhhcCCCCCCCEEECCCCcccccc
Confidence 4544 79999999999999999843 3788889999999999999998 78888999999999999999999966
Q ss_pred C-ccccCCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCC-CCCcccccccCcchhhhccccCCcccE
Q 047800 79 P-NTFGNLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDG-ILHRTYMGNLSHSLEFFVMSYCNDILY 156 (547)
Q Consensus 79 ~-~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~~l~~~~~~~~~~~~~~L~~ 156 (547)
+ ..|..+++|++|++++|.+++..+. .|.++++|++|+|++|++++ ..+.. +..++ +|++
T Consensus 118 ~~~~~~~l~~L~~L~l~~n~l~~~~~~-----~~~~l~~L~~L~l~~n~l~~~~~~~~-~~~l~------------~L~~ 179 (306)
T 2z66_A 118 EFSVFLSLRNLIYLDISHTHTRVAFNG-----IFNGLSSLEVLKMAGNSFQENFLPDI-FTELR------------NLTF 179 (306)
T ss_dssp TTTTTTTCTTCCEEECTTSCCEECSTT-----TTTTCTTCCEEECTTCEEGGGEECSC-CTTCT------------TCCE
T ss_pred cchhhhhccCCCEEECCCCcCCccchh-----hcccCcCCCEEECCCCccccccchhH-HhhCc------------CCCE
Confidence 5 6899999999999999999998877 79999999999999999987 34444 45555 9999
Q ss_pred EEccCCcCCCCCCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCC-CCCeE
Q 047800 157 LDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLS-YLDDL 235 (547)
Q Consensus 157 L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~-~L~~l 235 (547)
|++++|.+++..|..|.++++|+.|++++|.+ ++..+..|..+++|+.|+|++|++++..|..+..++ +|+.|
T Consensus 180 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l------~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L 253 (306)
T 2z66_A 180 LDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNF------FSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFL 253 (306)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECTTSCC------SBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEE
T ss_pred EECCCCCcCCcCHHHhcCCCCCCEEECCCCcc------CccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEE
Confidence 99999999988899999999999999999999 456667899999999999999999999999999985 99999
Q ss_pred eCCCCccccccCCC---CccCCcchhcccCccccccCC
Q 047800 236 DLSFNKLEGEILRG---GSFGNFLVELFEGNKLLYGSP 270 (547)
Q Consensus 236 ~l~~N~l~~~~~~~---~~~~~l~~l~l~~N~~~c~~~ 270 (547)
++++|++++..... .-+.....+....+...|..|
T Consensus 254 ~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p 291 (306)
T 2z66_A 254 NLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATP 291 (306)
T ss_dssp ECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEES
T ss_pred EccCCCeecccChHHHHHHHHhhhhhhccccccccCCc
Confidence 99999998653321 112223334445566666544
No 267
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.96 E-value=1.5e-30 Score=286.97 Aligned_cols=188 Identities=19% Similarity=0.298 Sum_probs=150.3
Q ss_pred CCCCccccccccCccce-----eEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCC
Q 047800 316 NDANISPVATSCSNEEF-----KALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKA 390 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~-----~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp 390 (547)
.|||||++++++...+. .++||||+++++|.+++.. .+++.+++.++.|++.||.||| +++|+||||||
T Consensus 137 ~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp 210 (681)
T 2pzi_A 137 VHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKP 210 (681)
T ss_dssp CCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred CCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHH---HCCCeecccCh
Confidence 49999999999987655 7999999999999988765 5899999999999999999999 99999999999
Q ss_pred CcEEeCCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhh
Q 047800 391 NNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEM 470 (547)
Q Consensus 391 ~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~ 470 (547)
+||+++.+ .+||+|||+++..... ....||+.|+|||++.+. ++.++|||||||++|||++|.+||........
T Consensus 211 ~NIll~~~-~~kl~DFG~a~~~~~~----~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~ 284 (681)
T 2pzi_A 211 ENIMLTEE-QLKLIDLGAVSRINSF----GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGL 284 (681)
T ss_dssp GGEEECSS-CEEECCCTTCEETTCC----SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSC
T ss_pred HHeEEeCC-cEEEEecccchhcccC----CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccccc
Confidence 99999986 8999999999865433 344799999999998765 48899999999999999999988764221110
Q ss_pred hhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCC-ChHHHHHHHHHHHHHH
Q 047800 471 TLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRI-NPKEIVTRLLKIIESL 542 (547)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp-s~~eil~~L~~i~~~~ 542 (547)
+ .. ......++.+.+++.+||+.||++|| +++++.+.+..+.+..
T Consensus 285 ----------~------------~~-----~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~ 330 (681)
T 2pzi_A 285 ----------P------------ED-----DPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLREV 330 (681)
T ss_dssp ----------C------------TT-----CHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHHHH
T ss_pred ----------c------------cc-----ccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHHHh
Confidence 0 00 00112245688999999999999999 5666777787776554
No 268
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=4.3e-29 Score=245.80 Aligned_cols=226 Identities=20% Similarity=0.175 Sum_probs=201.2
Q ss_pred CcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCee
Q 047800 12 LEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRNLNEL 91 (547)
Q Consensus 12 L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 91 (547)
-+.++++++.++. +|..+ .++|++|+|++|+|+ +..+..|.++++|++|+|++|+|+++.|..|.++++|++|
T Consensus 13 ~~~~~c~~~~l~~-ip~~~--~~~l~~L~l~~n~i~----~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 85 (285)
T 1ozn_A 13 KVTTSCPQQGLQA-VPVGI--PAASQRIFLHGNRIS----HVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQL 85 (285)
T ss_dssp SCEEECCSSCCSS-CCTTC--CTTCSEEECTTSCCC----EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred CeEEEcCcCCccc-CCcCC--CCCceEEEeeCCcCC----ccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEE
Confidence 3689999999985 45544 479999999999999 3445678899999999999999999889999999999999
Q ss_pred eccccc-cccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCCCCCCc
Q 047800 92 ALHNNY-LTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGPLPL 170 (547)
Q Consensus 92 ~L~~N~-i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~ 170 (547)
+|++|+ ++.+++. .|..+++|++|+|++|+++++.+.. +.+++ +|++|++++|++++..+.
T Consensus 86 ~l~~n~~l~~~~~~-----~~~~l~~L~~L~l~~n~l~~~~~~~-~~~l~------------~L~~L~l~~n~l~~~~~~ 147 (285)
T 1ozn_A 86 DLSDNAQLRSVDPA-----TFHGLGRLHTLHLDRCGLQELGPGL-FRGLA------------ALQYLYLQDNALQALPDD 147 (285)
T ss_dssp ECCSCTTCCCCCTT-----TTTTCTTCCEEECTTSCCCCCCTTT-TTTCT------------TCCEEECCSSCCCCCCTT
T ss_pred eCCCCCCccccCHH-----HhcCCcCCCEEECCCCcCCEECHhH-hhCCc------------CCCEEECCCCcccccCHh
Confidence 999997 9888777 8999999999999999999987766 55556 999999999999988888
Q ss_pred CCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCCccccccCCC-
Q 047800 171 EIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKLEGEILRG- 249 (547)
Q Consensus 171 ~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~- 249 (547)
.|.++++|+.|++++|.+ ++..+..|..+++|+.|+|++|++++..|..|..+++|+.|++++|++++.++..
T Consensus 148 ~~~~l~~L~~L~l~~n~l------~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 221 (285)
T 1ozn_A 148 TFRDLGNLTHLFLHGNRI------SSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEAL 221 (285)
T ss_dssp TTTTCTTCCEEECCSSCC------CEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHH
T ss_pred HhccCCCccEEECCCCcc------cccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHc
Confidence 899999999999999998 4456667999999999999999999999999999999999999999999866543
Q ss_pred CccCCcchhcccCcccccc
Q 047800 250 GSFGNFLVELFEGNKLLYG 268 (547)
Q Consensus 250 ~~~~~l~~l~l~~N~~~c~ 268 (547)
..+.+++.+++.+|++.|.
T Consensus 222 ~~l~~L~~L~l~~N~~~c~ 240 (285)
T 1ozn_A 222 APLRALQYLRLNDNPWVCD 240 (285)
T ss_dssp TTCTTCCEEECCSSCEECS
T ss_pred ccCcccCEEeccCCCccCC
Confidence 6688999999999999875
No 269
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=4.5e-29 Score=261.23 Aligned_cols=212 Identities=25% Similarity=0.271 Sum_probs=194.5
Q ss_pred CcccCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCC-ccccCCCCCcEEEccCCcccccCCcc
Q 047800 3 PPEIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIP-RFIFNSSKLSILSLAKNSFSSFIPNT 81 (547)
Q Consensus 3 p~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~ 81 (547)
+..|+++++|+.|+|++|+|+++.+..|.++++|++|+|++|+|+ .+| ..|.++++|++|+|++|+|+.+.+..
T Consensus 81 ~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~-----~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~ 155 (440)
T 3zyj_A 81 VNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLT-----TIPNGAFVYLSKLKELWLRNNPIESIPSYA 155 (440)
T ss_dssp TTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCS-----SCCTTTSCSCSSCCEEECCSCCCCEECTTT
T ss_pred HHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCC-----eeCHhHhhccccCceeeCCCCcccccCHHH
Confidence 578999999999999999999999999999999999999999999 555 47889999999999999999988889
Q ss_pred ccCCCCCCeeeccc-cccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEcc
Q 047800 82 FGNLRNLNELALHN-NYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLS 160 (547)
Q Consensus 82 ~~~l~~L~~L~L~~-N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls 160 (547)
|.++++|++|+|++ |.++.+++. .|.++++|++|+|++|+|+.++. +..++ +|+.|+|+
T Consensus 156 ~~~l~~L~~L~l~~~~~l~~i~~~-----~~~~l~~L~~L~L~~n~l~~~~~---~~~l~------------~L~~L~Ls 215 (440)
T 3zyj_A 156 FNRIPSLRRLDLGELKRLSYISEG-----AFEGLSNLRYLNLAMCNLREIPN---LTPLI------------KLDELDLS 215 (440)
T ss_dssp TTTCTTCCEEECCCCTTCCEECTT-----TTTTCSSCCEEECTTSCCSSCCC---CTTCS------------SCCEEECT
T ss_pred hhhCcccCEeCCCCCCCcceeCcc-----hhhcccccCeecCCCCcCccccc---cCCCc------------ccCEEECC
Confidence 99999999999998 667777766 79999999999999999997753 44444 99999999
Q ss_pred CCcCCCCCCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCC
Q 047800 161 SNFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFN 240 (547)
Q Consensus 161 ~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N 240 (547)
+|+|++..|..|.++++|+.|+|++|.+ ++..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|
T Consensus 216 ~N~l~~~~~~~~~~l~~L~~L~L~~n~l------~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 289 (440)
T 3zyj_A 216 GNHLSAIRPGSFQGLMHLQKLWMIQSQI------QVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHN 289 (440)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECTTCCC------CEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSS
T ss_pred CCccCccChhhhccCccCCEEECCCCce------eEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCC
Confidence 9999999999999999999999999998 5677889999999999999999999888899999999999999999
Q ss_pred ccccc
Q 047800 241 KLEGE 245 (547)
Q Consensus 241 ~l~~~ 245 (547)
++...
T Consensus 290 p~~Cd 294 (440)
T 3zyj_A 290 PWNCN 294 (440)
T ss_dssp CEECS
T ss_pred CccCC
Confidence 99853
No 270
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=2e-29 Score=253.13 Aligned_cols=212 Identities=19% Similarity=0.208 Sum_probs=192.8
Q ss_pred CCCcccCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCc
Q 047800 1 EIPPEIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPN 80 (547)
Q Consensus 1 ~ip~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 80 (547)
++|+.++++++|++|+|++|+|+ .+|..|+++++|++|+|++|+|+ .+|..+.++++|++|+|++|++.+.+|.
T Consensus 95 ~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-----~lp~~l~~l~~L~~L~L~~n~~~~~~p~ 168 (328)
T 4fcg_A 95 QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-----ALPASIASLNRLRELSIRACPELTELPE 168 (328)
T ss_dssp SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-----CCCGGGGGCTTCCEEEEEEETTCCCCCS
T ss_pred hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-----cCcHHHhcCcCCCEEECCCCCCccccCh
Confidence 47888999999999999999999 78899999999999999999998 8899999999999999999988888888
Q ss_pred cccC---------CCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccC
Q 047800 81 TFGN---------LRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYC 151 (547)
Q Consensus 81 ~~~~---------l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~ 151 (547)
.++. +++|++|+|++|+|+.++. .|..+++|++|+|++|+++++++. +..++
T Consensus 169 ~~~~~~~~~~~~~l~~L~~L~L~~n~l~~lp~------~l~~l~~L~~L~L~~N~l~~l~~~--l~~l~----------- 229 (328)
T 4fcg_A 169 PLASTDASGEHQGLVNLQSLRLEWTGIRSLPA------SIANLQNLKSLKIRNSPLSALGPA--IHHLP----------- 229 (328)
T ss_dssp CSEEEC-CCCEEESTTCCEEEEEEECCCCCCG------GGGGCTTCCEEEEESSCCCCCCGG--GGGCT-----------
T ss_pred hHhhccchhhhccCCCCCEEECcCCCcCcchH------hhcCCCCCCEEEccCCCCCcCchh--hccCC-----------
Confidence 7664 9999999999999996654 588999999999999999987653 45555
Q ss_pred CcccEEEccCCcCCCCCCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCC
Q 047800 152 NDILYLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSY 231 (547)
Q Consensus 152 ~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 231 (547)
+|++|+|++|.+.+.+|..|+++++|+.|++++|.+ .+.+|..|..+++|+.|+|++|++.+.+|..+..+++
T Consensus 230 -~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~------~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~ 302 (328)
T 4fcg_A 230 -KLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSN------LLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPA 302 (328)
T ss_dssp -TCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTT------CCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCT
T ss_pred -CCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCc------hhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccC
Confidence 999999999999999999999999999999999988 6789999999999999999999999999999999999
Q ss_pred CCeEeCCCCcccc
Q 047800 232 LDDLDLSFNKLEG 244 (547)
Q Consensus 232 L~~l~l~~N~l~~ 244 (547)
|+.+++..|.+..
T Consensus 303 L~~l~l~~~~~~~ 315 (328)
T 4fcg_A 303 NCIILVPPHLQAQ 315 (328)
T ss_dssp TCEEECCGGGSCC
T ss_pred ceEEeCCHHHHHH
Confidence 9999999887764
No 271
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=3.9e-29 Score=262.58 Aligned_cols=213 Identities=23% Similarity=0.243 Sum_probs=194.9
Q ss_pred CcccCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccc
Q 047800 3 PPEIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTF 82 (547)
Q Consensus 3 p~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 82 (547)
|..|+++++|+.|+|++|+|+++.+..|.++++|++|+|++|+|+ +..+..|.++++|++|+|++|+|+.+.+..|
T Consensus 92 ~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~----~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 167 (452)
T 3zyi_A 92 ADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLT----VIPSGAFEYLSKLRELWLRNNPIESIPSYAF 167 (452)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCS----BCCTTTSSSCTTCCEEECCSCCCCEECTTTT
T ss_pred HHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCC----ccChhhhcccCCCCEEECCCCCcceeCHhHH
Confidence 678999999999999999999999999999999999999999999 3444567899999999999999999888899
Q ss_pred cCCCCCCeeeccc-cccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccC
Q 047800 83 GNLRNLNELALHN-NYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSS 161 (547)
Q Consensus 83 ~~l~~L~~L~L~~-N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~ 161 (547)
.++++|++|+|++ |.++.+++. .|.++++|++|+|++|+|++++. +..++ +|+.|+|++
T Consensus 168 ~~l~~L~~L~l~~~~~l~~i~~~-----~~~~l~~L~~L~L~~n~l~~~~~---~~~l~------------~L~~L~Ls~ 227 (452)
T 3zyi_A 168 NRVPSLMRLDLGELKKLEYISEG-----AFEGLFNLKYLNLGMCNIKDMPN---LTPLV------------GLEELEMSG 227 (452)
T ss_dssp TTCTTCCEEECCCCTTCCEECTT-----TTTTCTTCCEEECTTSCCSSCCC---CTTCT------------TCCEEECTT
T ss_pred hcCCcccEEeCCCCCCccccChh-----hccCCCCCCEEECCCCccccccc---ccccc------------cccEEECcC
Confidence 9999999999998 677777776 79999999999999999998743 44445 999999999
Q ss_pred CcCCCCCCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCCc
Q 047800 162 NFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFNK 241 (547)
Q Consensus 162 N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~ 241 (547)
|.|++..|..|.++++|+.|++++|.+ ++..|..|..+++|+.|+|++|++++..+..|..+++|+.|++++|+
T Consensus 228 N~l~~~~~~~~~~l~~L~~L~L~~n~l------~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np 301 (452)
T 3zyi_A 228 NHFPEIRPGSFHGLSSLKKLWVMNSQV------SLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNP 301 (452)
T ss_dssp SCCSEECGGGGTTCTTCCEEECTTSCC------CEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSC
T ss_pred CcCcccCcccccCccCCCEEEeCCCcC------ceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCC
Confidence 999999999999999999999999998 56788899999999999999999998888899999999999999999
Q ss_pred cccc
Q 047800 242 LEGE 245 (547)
Q Consensus 242 l~~~ 245 (547)
+...
T Consensus 302 ~~Cd 305 (452)
T 3zyi_A 302 WNCD 305 (452)
T ss_dssp EECS
T ss_pred cCCC
Confidence 9854
No 272
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.96 E-value=5.5e-29 Score=272.22 Aligned_cols=122 Identities=22% Similarity=0.294 Sum_probs=87.7
Q ss_pred cccCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCC-ccccCCCCCcEEEccCCcccccCCccc
Q 047800 4 PEIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIP-RFIFNSSKLSILSLAKNSFSSFIPNTF 82 (547)
Q Consensus 4 ~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 82 (547)
.+|+++++|++|+|++|+|+++.+++|.++++|++|+|++|+|+ .+| ..|.++++|++|+|++|+|+++.+..|
T Consensus 70 ~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~-----~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~ 144 (635)
T 4g8a_A 70 YSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ-----SLALGAFSGLSSLQKLVAVETNLASLENFPI 144 (635)
T ss_dssp TTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC-----EECGGGGTTCTTCCEEECTTSCCCCSTTCCC
T ss_pred HHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCC-----CCCHHHhcCCCCCCEEECCCCcCCCCChhhh
Confidence 46777777777777777777777777777777777777777777 444 456677777777777777777666677
Q ss_pred cCCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcc
Q 047800 83 GNLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRT 134 (547)
Q Consensus 83 ~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 134 (547)
+++++|++|+|++|.|+.+... ..+..+++|++|+|++|+|+++.+..
T Consensus 145 ~~L~~L~~L~Ls~N~l~~~~~~----~~~~~l~~L~~L~L~~N~l~~~~~~~ 192 (635)
T 4g8a_A 145 GHLKTLKELNVAHNLIQSFKLP----EYFSNLTNLEHLDLSSNKIQSIYCTD 192 (635)
T ss_dssp TTCTTCCEEECCSSCCCCCCCC----GGGGGCTTCCEEECCSSCCCEECGGG
T ss_pred hcCcccCeeccccCccccCCCc----hhhccchhhhhhcccCcccccccccc
Confidence 7777777777777777665422 15667778888888888887776553
No 273
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.96 E-value=8.5e-30 Score=250.87 Aligned_cols=229 Identities=11% Similarity=-0.002 Sum_probs=159.9
Q ss_pred cCCCCccCCcchhcccCccccccCCCCCCcccccccccceeeccchhhHHHHHHHH-HHHHHHhhcCCCCCCCCCccccc
Q 047800 246 ILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLPLRTIFMIVVI-LLILRCRKRGKRPSNDANISPVA 324 (547)
Q Consensus 246 ~~~~~~~~~l~~l~l~~N~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~nIv~l~ 324 (547)
..+.|.++.++..........++.|........... ....+..|+. +..+ .||||++++
T Consensus 38 ~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~----------~~~~~~~e~~~l~~l----------~hp~iv~~~ 97 (286)
T 3uqc_A 38 FHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDD----------VLQETLSRTLRLSRI----------DKPGVARVL 97 (286)
T ss_dssp EEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHH----------HHHHHHHHHHHHHTC----------CCTTBCCEE
T ss_pred EEcccCCeEEEEEEecCCCceEEEEEECcccccCHH----------HHHHHHHHHHHHhcC----------CCCCcceee
Confidence 445577888887766554444555432211111000 0011334443 3333 499999999
Q ss_pred cccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCCcEEEc
Q 047800 325 TSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLS 404 (547)
Q Consensus 325 ~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~~~kl~ 404 (547)
+++.+.+..++||||+++++|.++++.+ ....++.+++.|++.||+||| +++|+||||||+||+++.++.+||+
T Consensus 98 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~ 171 (286)
T 3uqc_A 98 DVVHTRAGGLVVAEWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLA 171 (286)
T ss_dssp EEEEETTEEEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEEC
T ss_pred EEEEECCcEEEEEEecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEE
Confidence 9999999999999999999999999653 355678999999999999999 9999999999999999999999998
Q ss_pred ccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhhhhhccCchh
Q 047800 405 DFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPISI 484 (547)
Q Consensus 405 Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 484 (547)
++| |++ .++.++|||||||++|||++|+.||............ ..
T Consensus 172 ~~~--------------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~-~~------- 216 (286)
T 3uqc_A 172 YPA--------------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA-ER------- 216 (286)
T ss_dssp SCC--------------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC-CB-------
T ss_pred ecc--------------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH-HH-------
Confidence 543 233 3688999999999999999999999764332211000 00
Q ss_pred hhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHHHHHHHHHH
Q 047800 485 MEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESL 542 (547)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~L~~i~~~~ 542 (547)
.+.. ...........+++++.+++.+||+.||++| |+.|+++.|+++....
T Consensus 217 --~~~~----~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 217 --DTAG----QPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp --CTTS----CBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred --Hhcc----CCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccC
Confidence 0000 0000000112235568999999999999999 9999999999886543
No 274
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.96 E-value=2.4e-28 Score=245.71 Aligned_cols=234 Identities=21% Similarity=0.217 Sum_probs=185.7
Q ss_pred CCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCCCC
Q 047800 10 HNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRNLN 89 (547)
Q Consensus 10 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 89 (547)
.+|+.++++++.++. +|..+. ++|+.|+|++|+|+ +..+..|.++++|++|+|++|+|+++.|..|+++++|+
T Consensus 31 c~l~~l~~~~~~l~~-lp~~~~--~~l~~L~L~~n~i~----~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 103 (330)
T 1xku_A 31 CHLRVVQCSDLGLEK-VPKDLP--PDTALLDLQNNKIT----EIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLE 103 (330)
T ss_dssp EETTEEECTTSCCCS-CCCSCC--TTCCEEECCSSCCC----CBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCC
T ss_pred CCCeEEEecCCCccc-cCccCC--CCCeEEECCCCcCC----EeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCC
Confidence 489999999999984 555553 68999999999999 34455788999999999999999998899999999999
Q ss_pred eeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCc--------------chhhhccccCCccc
Q 047800 90 ELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSH--------------SLEFFVMSYCNDIL 155 (547)
Q Consensus 90 ~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~--------------~~~~~~~~~~~~L~ 155 (547)
+|+|++|+|+.++.. .+ ++|++|++++|+++++.+.. +.+++. ......++.+++|+
T Consensus 104 ~L~Ls~n~l~~l~~~-----~~---~~L~~L~l~~n~l~~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~ 174 (330)
T 1xku_A 104 RLYLSKNQLKELPEK-----MP---KTLQELRVHENEITKVRKSV-FNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLS 174 (330)
T ss_dssp EEECCSSCCSBCCSS-----CC---TTCCEEECCSSCCCBBCHHH-HTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCC
T ss_pred EEECCCCcCCccChh-----hc---ccccEEECCCCcccccCHhH-hcCCccccEEECCCCcCCccCcChhhccCCCCcC
Confidence 999999999988765 22 79999999999999887765 333330 12223455566666
Q ss_pred EEEccCCcCCCCCCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeE
Q 047800 156 YLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDL 235 (547)
Q Consensus 156 ~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l 235 (547)
+|++++|.++. +|..+. ++|+.|++++|.+ ++..|..|..+++|+.|+|++|++++..+..+..+++|+.|
T Consensus 175 ~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l------~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 245 (330)
T 1xku_A 175 YIRIADTNITT-IPQGLP--PSLTELHLDGNKI------TKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLREL 245 (330)
T ss_dssp EEECCSSCCCS-CCSSCC--TTCSEEECTTSCC------CEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEE
T ss_pred EEECCCCcccc-CCcccc--ccCCEEECCCCcC------CccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEE
Confidence 66666666663 333332 5666666666666 56778889999999999999999998888889999999999
Q ss_pred eCCCCccccccCCCCccCCcchhcccCcccccc
Q 047800 236 DLSFNKLEGEILRGGSFGNFLVELFEGNKLLYG 268 (547)
Q Consensus 236 ~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~c~ 268 (547)
++++|+++..+.....+.++..+++.+|++..-
T Consensus 246 ~L~~N~l~~lp~~l~~l~~L~~L~l~~N~i~~~ 278 (330)
T 1xku_A 246 HLNNNKLVKVPGGLADHKYIQVVYLHNNNISAI 278 (330)
T ss_dssp ECCSSCCSSCCTTTTTCSSCCEEECCSSCCCCC
T ss_pred ECCCCcCccCChhhccCCCcCEEECCCCcCCcc
Confidence 999999996555557788899999999988643
No 275
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.96 E-value=1.7e-30 Score=269.38 Aligned_cols=170 Identities=15% Similarity=0.167 Sum_probs=134.4
Q ss_pred eeEEEEeccCCCChhHHhh------hCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCCcEEEcc
Q 047800 332 FKALILEYKPHGSLEKYLY------SGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSD 405 (547)
Q Consensus 332 ~~~lv~ey~~~gsL~~~l~------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~~~kl~D 405 (547)
..+++|+++ +++|.+++. .....+++..++.++.|++.||+||| +++|+||||||+|||++.++.+||+|
T Consensus 179 ~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~iiHrDiKp~NILl~~~~~~kL~D 254 (413)
T 3dzo_A 179 SRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLVHTYLRPVDIVLDQRGGVFLTG 254 (413)
T ss_dssp SEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECC
T ss_pred ceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcccceEEEecCCeEEEEe
Confidence 467778766 679999984 22345788899999999999999999 99999999999999999999999999
Q ss_pred cCCcccCCCCCcccccccCCCCCCCCCCC----------CCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhhhhhhh
Q 047800 406 FGIAKTGEDQSMTQTQTLATIGYMAPEYG----------REGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHW 475 (547)
Q Consensus 406 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~~~~~~ 475 (547)
||+++..... .....| +.|+|||++ .+..++.++|||||||++|||++|+.||..........
T Consensus 255 FG~a~~~~~~---~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~--- 327 (413)
T 3dzo_A 255 FEHLVRDGAS---AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSE--- 327 (413)
T ss_dssp GGGCEETTEE---ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSG---
T ss_pred ccceeecCCc---cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHH---
Confidence 9998765433 334467 999999999 55668899999999999999999999997643222100
Q ss_pred hhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 476 VNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
.++. ... .+++++.+++.+||+.||++|||+.++++.
T Consensus 328 ----------~~~~----~~~--------~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~ 364 (413)
T 3dzo_A 328 ----------WIFR----SCK--------NIPQPVRALLEGFLRYPKEDRLLPLQAMET 364 (413)
T ss_dssp ----------GGGS----SCC--------CCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ----------HHHh----hcc--------cCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 0000 000 123568999999999999999999988653
No 276
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.96 E-value=7.6e-29 Score=242.84 Aligned_cols=215 Identities=22% Similarity=0.248 Sum_probs=169.6
Q ss_pred CCcccCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCcc
Q 047800 2 IPPEIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNT 81 (547)
Q Consensus 2 ip~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 81 (547)
+|..+. ++|++|+|++|+|+++.+..|.++++|++|+|++|+|+ +..+..|.++++|++|+|++|+|+++.+..
T Consensus 22 ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~----~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 95 (276)
T 2z62_A 22 IPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ----TIEDGAYQSLSHLSTLILTGNPIQSLALGA 95 (276)
T ss_dssp CCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCC----EECTTTTTTCTTCCEEECTTCCCCEECTTT
T ss_pred cCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCC----ccCHHHccCCcCCCEEECCCCccCccChhh
Confidence 455443 47888999999888887778888888999999998888 344457778888999999999888888888
Q ss_pred ccCCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCC-CcccccccCcchhhhccccCCcccEEEcc
Q 047800 82 FGNLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGIL-HRTYMGNLSHSLEFFVMSYCNDILYLDLS 160 (547)
Q Consensus 82 ~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~~l~~~~~~~~~~~~~~L~~L~ls 160 (547)
|.++++|++|++++|.++++++. .|..+++|++|+|++|+++++. +.. +.+++ +|++|+++
T Consensus 96 ~~~l~~L~~L~l~~n~l~~~~~~-----~~~~l~~L~~L~l~~n~l~~~~l~~~-~~~l~------------~L~~L~Ls 157 (276)
T 2z62_A 96 FSGLSSLQKLVAVETNLASLENF-----PIGHLKTLKELNVAHNLIQSFKLPEY-FSNLT------------NLEHLDLS 157 (276)
T ss_dssp TTTCTTCCEEECTTSCCCCSTTC-----CCTTCTTCCEEECCSSCCCCCCCCGG-GGGCT------------TCCEEECC
T ss_pred hcCCccccEEECCCCCccccCch-----hcccCCCCCEEECcCCccceecCchh-hccCC------------CCCEEECC
Confidence 88888899999998888888776 6888888999999998888754 444 45555 88889999
Q ss_pred CCcCCCCCCcCCCCCcccc----ccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEe
Q 047800 161 SNFLTGPLPLEIGNLKGLV----GVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLD 236 (547)
Q Consensus 161 ~N~l~~~~p~~~~~l~~L~----~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~ 236 (547)
+|++++..+..|..+++|+ .|++++|.++ +..+..|. ..+|+.|+|++|++++..+..|..+++|+.|+
T Consensus 158 ~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~------~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 230 (276)
T 2z62_A 158 SNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN------FIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIW 230 (276)
T ss_dssp SSCCCEECGGGGHHHHTCTTCCEEEECCSSCCC------EECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEE
T ss_pred CCCCCcCCHHHhhhhhhccccceeeecCCCccc------ccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEE
Confidence 9988877777777777777 7888888884 34444443 44788888888888877777788888888888
Q ss_pred CCCCccccccC
Q 047800 237 LSFNKLEGEIL 247 (547)
Q Consensus 237 l~~N~l~~~~~ 247 (547)
+++|++.+..+
T Consensus 231 l~~N~~~c~c~ 241 (276)
T 2z62_A 231 LHTNPWDCSCP 241 (276)
T ss_dssp CCSSCBCCCTT
T ss_pred ccCCcccccCC
Confidence 88888886443
No 277
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.96 E-value=1.5e-28 Score=267.89 Aligned_cols=246 Identities=19% Similarity=0.211 Sum_probs=145.0
Q ss_pred CcccCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccc
Q 047800 3 PPEIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTF 82 (547)
Q Consensus 3 p~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 82 (547)
|.+|+++++|++|+|++|+|+++.|..|+++++|++|+|++|+++ +..|..|.++++|++|+|++|+|+++.|..|
T Consensus 50 ~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~----~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~ 125 (606)
T 3t6q_A 50 NTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLI----FMAETALSGPKALKHLFFIQTGISSIDFIPL 125 (606)
T ss_dssp TTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCS----EECTTTTSSCTTCCEEECTTSCCSCGGGSCC
T ss_pred hhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCccc----ccChhhhcccccccEeeccccCcccCCcchh
Confidence 456677777777777777777666777777777777777777776 4556666677777777777777776656667
Q ss_pred cCCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCc---------------------
Q 047800 83 GNLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSH--------------------- 141 (547)
Q Consensus 83 ~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~--------------------- 141 (547)
+++++|++|+|++|++++++.. .+.++++|++|+|++|+++++.+.. ++.+..
T Consensus 126 ~~l~~L~~L~L~~n~l~~~~~~-----~~~~l~~L~~L~L~~n~l~~~~~~~-~~~l~~L~~l~L~l~~n~l~~~~~~~~ 199 (606)
T 3t6q_A 126 HNQKTLESLYLGSNHISSIKLP-----KGFPTEKLKVLDFQNNAIHYLSKED-MSSLQQATNLSLNLNGNDIAGIEPGAF 199 (606)
T ss_dssp TTCTTCCEEECCSSCCCCCCCC-----TTCCCTTCCEEECCSSCCCEECHHH-HHTTTTCCSEEEECTTCCCCEECTTTT
T ss_pred ccCCcccEEECCCCcccccCcc-----cccCCcccCEEEcccCcccccChhh-hhhhcccceeEEecCCCccCccChhHh
Confidence 7777777777777777665433 3444666666666666665554432 111110
Q ss_pred ---chhhh---------------------------------------ccccCC--cccEEEccCCcCCCCCCcCCCCCcc
Q 047800 142 ---SLEFF---------------------------------------VMSYCN--DILYLDLSSNFLTGPLPLEIGNLKG 177 (547)
Q Consensus 142 ---~~~~~---------------------------------------~~~~~~--~L~~L~ls~N~l~~~~p~~~~~l~~ 177 (547)
.+... .+.++. +|+.|++++|.+++..+..|.++++
T Consensus 200 ~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~ 279 (606)
T 3t6q_A 200 DSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSG 279 (606)
T ss_dssp TTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTT
T ss_pred hhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccC
Confidence 00000 001111 4566666666666555555666666
Q ss_pred ccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCCccccccCCC--CccCCc
Q 047800 178 LVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKLEGEILRG--GSFGNF 255 (547)
Q Consensus 178 L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~--~~~~~l 255 (547)
|+.|++++|.++ .+|+.+..+++|++|++++|++++..|..+..+++|+.|++++|.+.+..+.. ..+.++
T Consensus 280 L~~L~l~~n~l~-------~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L 352 (606)
T 3t6q_A 280 LQELDLTATHLS-------ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENL 352 (606)
T ss_dssp CSEEECTTSCCS-------CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTC
T ss_pred CCEEeccCCccC-------CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcC
Confidence 666666666663 45555556666666666666665555555556666666666666555433321 345555
Q ss_pred chhcccCccc
Q 047800 256 LVELFEGNKL 265 (547)
Q Consensus 256 ~~l~l~~N~~ 265 (547)
+.+++.+|.+
T Consensus 353 ~~L~l~~n~l 362 (606)
T 3t6q_A 353 RELDLSHDDI 362 (606)
T ss_dssp CEEECCSSCC
T ss_pred CEEECCCCcc
Confidence 5555555554
No 278
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.96 E-value=1.8e-29 Score=250.26 Aligned_cols=181 Identities=19% Similarity=0.253 Sum_probs=139.6
Q ss_pred CCCCccccccccCc----cceeEEEEeccCCCChhHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCC
Q 047800 316 NDANISPVATSCSN----EEFKALILEYKPHGSLEKYLYSGN-CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKA 390 (547)
Q Consensus 316 ~H~nIv~l~~~~~~----~~~~~lv~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp 390 (547)
.||||+++++++.. ....++||||+++|+|.+++.... ..+++.++..++.|++.||+||| +++|+||||||
T Consensus 69 ~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp 145 (299)
T 3m2w_A 69 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKP 145 (299)
T ss_dssp TSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred cCCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCH
Confidence 39999999999876 678999999999999999998754 46999999999999999999999 99999999999
Q ss_pred CcEEeCC---CCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhh
Q 047800 391 NNVLLDD---NMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFN 467 (547)
Q Consensus 391 ~Nill~~---~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~ 467 (547)
+||+++. ++.+||+|||++.... +..++.++||||+||++|||++|+.||.....
T Consensus 146 ~Nil~~~~~~~~~~kl~Dfg~a~~~~----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~ 203 (299)
T 3m2w_A 146 ENLLYTSKRPNAILKLTDFGFAKETT----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG 203 (299)
T ss_dssp GGEEESSSSTTCCEEECCCTTCEECT----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC---
T ss_pred HHEEEecCCCCCcEEEeccccccccc----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcc
Confidence 9999998 7899999999986432 23467899999999999999999999976432
Q ss_pred hhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCCCCCCChHHHHHH
Q 047800 468 EEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTR 534 (547)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~eil~~ 534 (547)
...... .. ..+.. ............+++++.+++.+||..||++|||+.|+++.
T Consensus 204 ~~~~~~-~~---------~~~~~---~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 204 LAISPG-MK---------TRIRM---GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp ----CC-SC---------CSSCT---TCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhhHH-HH---------HHHhh---ccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 221000 00 00000 00000001112235679999999999999999999999874
No 279
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.96 E-value=3.5e-28 Score=244.71 Aligned_cols=239 Identities=23% Similarity=0.243 Sum_probs=192.1
Q ss_pred CCcccCCC------CCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCccc
Q 047800 2 IPPEIGNL------HNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFS 75 (547)
Q Consensus 2 ip~~~~~l------~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~ 75 (547)
+|+.+... .+|+.+++++|.++ .+|..+. ++|+.|+|++|.|+ +..|..|.++++|++|+|++|+|+
T Consensus 19 lp~~~~~~cp~~c~c~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~----~~~~~~~~~l~~L~~L~L~~n~l~ 91 (332)
T 2ft3_A 19 LPPTYSAMCPFGCHCHLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDIS----ELRKDDFKGLQHLYALVLVNNKIS 91 (332)
T ss_dssp ------CCCCSSCEEETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCC----EECTTTTTTCTTCCEEECCSSCCC
T ss_pred CCCcccCCCCCCCcccCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCC----ccCHhHhhCCCCCcEEECCCCccC
Confidence 45555443 37999999999998 4565553 68999999999999 455678999999999999999999
Q ss_pred ccCCccccCCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCccc
Q 047800 76 SFIPNTFGNLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDIL 155 (547)
Q Consensus 76 ~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~ 155 (547)
++.|.+|+++++|++|+|++|+|+.++.. .+ ++|++|++++|+|+.+++.. +.+++ +|+
T Consensus 92 ~~~~~~~~~l~~L~~L~L~~n~l~~l~~~-----~~---~~L~~L~l~~n~i~~~~~~~-~~~l~------------~L~ 150 (332)
T 2ft3_A 92 KIHEKAFSPLRKLQKLYISKNHLVEIPPN-----LP---SSLVELRIHDNRIRKVPKGV-FSGLR------------NMN 150 (332)
T ss_dssp EECGGGSTTCTTCCEEECCSSCCCSCCSS-----CC---TTCCEEECCSSCCCCCCSGG-GSSCS------------SCC
T ss_pred ccCHhHhhCcCCCCEEECCCCcCCccCcc-----cc---ccCCEEECCCCccCccCHhH-hCCCc------------cCC
Confidence 98899999999999999999999988875 32 79999999999999988766 45555 777
Q ss_pred EEEccCCcCC--CCCCcCCCCCccccccccccccccCc---------------cccCCCCCcchhcCCCCCEEECcCCcC
Q 047800 156 YLDLSSNFLT--GPLPLEIGNLKGLVGVDFSMNNFSGY---------------NKLQGSIPESFGDLSNNNTLNLSNNNL 218 (547)
Q Consensus 156 ~L~ls~N~l~--~~~p~~~~~l~~L~~L~ls~N~~~~~---------------n~l~~~~p~~~~~l~~L~~L~l~~N~l 218 (547)
.|++++|.++ +..|..|..+ +|+.|++++|.+++. |.+++..+..|..+++|+.|+|++|++
T Consensus 151 ~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l 229 (332)
T 2ft3_A 151 CIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQI 229 (332)
T ss_dssp EEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSCCSSSCSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCC
T ss_pred EEECCCCccccCCCCcccccCC-ccCEEECcCCCCCccCccccCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcC
Confidence 7777777774 3556666666 666666666665422 455777788999999999999999999
Q ss_pred CCCCCcchhCCCCCCeEeCCCCccccccCCCCccCCcchhcccCccccccC
Q 047800 219 SGAIPISLEKLSYLDDLDLSFNKLEGEILRGGSFGNFLVELFEGNKLLYGS 269 (547)
Q Consensus 219 ~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~c~~ 269 (547)
++..+..|..+++|+.|++++|+++..+.....+.+++.+++.+|++..-.
T Consensus 230 ~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N~l~~~~ 280 (332)
T 2ft3_A 230 RMIENGSLSFLPTLRELHLDNNKLSRVPAGLPDLKLLQVVYLHTNNITKVG 280 (332)
T ss_dssp CCCCTTGGGGCTTCCEEECCSSCCCBCCTTGGGCTTCCEEECCSSCCCBCC
T ss_pred CcCChhHhhCCCCCCEEECCCCcCeecChhhhcCccCCEEECCCCCCCccC
Confidence 988888999999999999999999955444577889999999999986543
No 280
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.96 E-value=2.8e-29 Score=274.53 Aligned_cols=248 Identities=21% Similarity=0.212 Sum_probs=186.6
Q ss_pred CCcccCCCCCCcEEEccCCccccC-----------------CChhhc--CCCCCCEEEcccccCCCCCCCCCCccccCCC
Q 047800 2 IPPEIGNLHNLEYLGFGHNKLVGV-----------------VPATIF--NLSTLKHLELYNNSLSGSLSGTIPRFIFNSS 62 (547)
Q Consensus 2 ip~~~~~l~~L~~L~Ls~N~i~~~-----------------~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~ 62 (547)
||++|+++++|++|+|++|+|++. +|..++ ++++|++|+|++|++. +.+|..+++++
T Consensus 198 ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~----~~~p~~l~~l~ 273 (636)
T 4eco_A 198 VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNL----TKLPTFLKALP 273 (636)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTC----SSCCTTTTTCS
T ss_pred CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCC----ccChHHHhcCC
Confidence 688999999999999999999985 899988 9999999999999999 79999999999
Q ss_pred CCcEEEccCCc-ccc-cCCccccCC------CCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcc
Q 047800 63 KLSILSLAKNS-FSS-FIPNTFGNL------RNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRT 134 (547)
Q Consensus 63 ~L~~L~Ls~N~-l~~-~~~~~~~~l------~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 134 (547)
+|++|+|++|+ +++ .+|..++.+ ++|++|+|++|+++.++.. +.|.++++|++|+|++|++++..+ .
T Consensus 274 ~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~----~~l~~l~~L~~L~L~~N~l~g~ip-~ 348 (636)
T 4eco_A 274 EMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVE----TSLQKMKKLGMLECLYNQLEGKLP-A 348 (636)
T ss_dssp SCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCH----HHHTTCTTCCEEECCSCCCEEECC-C
T ss_pred CCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCch----hhhccCCCCCEEeCcCCcCccchh-h
Confidence 99999999998 998 789988887 9999999999999977751 158899999999999999995444 4
Q ss_pred cccccCc---------ch--hhhccccCCc-ccEEEccCCcCCCCCCcCCCCCc--cccccccccccccCccccCCCCCc
Q 047800 135 YMGNLSH---------SL--EFFVMSYCND-ILYLDLSSNFLTGPLPLEIGNLK--GLVGVDFSMNNFSGYNKLQGSIPE 200 (547)
Q Consensus 135 ~~~~l~~---------~~--~~~~~~~~~~-L~~L~ls~N~l~~~~p~~~~~l~--~L~~L~ls~N~~~~~n~l~~~~p~ 200 (547)
+.+++. .+ -...+..+++ |++|++++|.++ .+|..+..++ +|+.|++++|.+ ++.+|+
T Consensus 349 -~~~l~~L~~L~L~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l------~~~~p~ 420 (636)
T 4eco_A 349 -FGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEI------GSVDGK 420 (636)
T ss_dssp -CEEEEEESEEECCSSEEEECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCT------TTTTTC
T ss_pred -hCCCCCCCEEECCCCccccccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcC------CCcchh
Confidence 443330 00 0012444555 666666666666 4555555543 666666666666 566666
Q ss_pred chh-------cCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCCccccccCCCCccC--------CcchhcccCccc
Q 047800 201 SFG-------DLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKLEGEILRGGSFG--------NFLVELFEGNKL 265 (547)
Q Consensus 201 ~~~-------~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~--------~l~~l~l~~N~~ 265 (547)
.|. .+++|+.|+|++|++++.++..+..+++|+.|++++|+++..+....... +++.+++.+|.+
T Consensus 421 ~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l 500 (636)
T 4eco_A 421 NFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKL 500 (636)
T ss_dssp SSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCC
T ss_pred hhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcC
Confidence 666 66677777777777775555556667777777777777774333322211 677777777776
Q ss_pred c
Q 047800 266 L 266 (547)
Q Consensus 266 ~ 266 (547)
.
T Consensus 501 ~ 501 (636)
T 4eco_A 501 T 501 (636)
T ss_dssp C
T ss_pred C
Confidence 5
No 281
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.96 E-value=5e-28 Score=267.32 Aligned_cols=255 Identities=23% Similarity=0.196 Sum_probs=173.7
Q ss_pred ccCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCc-cccC--CCCCcEEEccCCcccccCCcc
Q 047800 5 EIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPR-FIFN--SSKLSILSLAKNSFSSFIPNT 81 (547)
Q Consensus 5 ~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~-~~~~--l~~L~~L~Ls~N~l~~~~~~~ 81 (547)
.|+++++|+.|+|++|+|+++.+..|.++++|++|+|++|.++. ..+|. .|.. .++|+.|+|++|+|+++.|.+
T Consensus 324 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~---~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~ 400 (680)
T 1ziw_A 324 SFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSL---RTLTNETFVSLAHSPLHILNLTKNKISKIESDA 400 (680)
T ss_dssp TTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCC---CEECTTTTGGGTTSCCCEEECTTSCCCEECTTT
T ss_pred hcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhh---hhcchhhhcccccCcCceEECCCCCCCeEChhh
Confidence 67788899999999999998888889999989988888887541 12222 2222 246666666777777666667
Q ss_pred ccCCCCCCeeecccccccccc-CchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCc--------------chhhh
Q 047800 82 FGNLRNLNELALHNNYLTSST-LELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSH--------------SLEFF 146 (547)
Q Consensus 82 ~~~l~~L~~L~L~~N~i~~~~-~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~--------------~~~~~ 146 (547)
|.++++|++|+|++|++++.. +. .|.++++|++|++++|+++++.+..| ..++. .....
T Consensus 401 ~~~l~~L~~L~L~~N~l~~~~~~~-----~~~~l~~L~~L~Ls~n~l~~~~~~~~-~~~~~L~~L~l~~n~l~~~~~~p~ 474 (680)
T 1ziw_A 401 FSWLGHLEVLDLGLNEIGQELTGQ-----EWRGLENIFEIYLSYNKYLQLTRNSF-ALVPSLQRLMLRRVALKNVDSSPS 474 (680)
T ss_dssp TTTCTTCCEEECCSSCCEEECCSG-----GGTTCTTCCEEECCSCSEEECCTTTT-TTCTTCCEEECTTSCCBCTTCSSC
T ss_pred hhCCCCCCEEeCCCCcCccccCcc-----cccCcccccEEecCCCCcceeChhhh-hcCcccccchhccccccccccCCc
Confidence 777777777777777766433 23 56666667777777766665554442 11110 01112
Q ss_pred ccccCCcccEEEccCCcCCCCCCcCCCCCccccccccccccccCc--------------------------cccCCCCCc
Q 047800 147 VMSYCNDILYLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSGY--------------------------NKLQGSIPE 200 (547)
Q Consensus 147 ~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~--------------------------n~l~~~~p~ 200 (547)
.++.+++|+.|++++|+|++..+..|.++++|+.|++++|.+++. |.++...++
T Consensus 475 ~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~ 554 (680)
T 1ziw_A 475 PFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVE 554 (680)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred ccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHH
Confidence 345566777777777777766666677777777777777766421 334544455
Q ss_pred chhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCCccccccCCC-C-ccCCcchhcccCcccccc
Q 047800 201 SFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKLEGEILRG-G-SFGNFLVELFEGNKLLYG 268 (547)
Q Consensus 201 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~-~~~~l~~l~l~~N~~~c~ 268 (547)
.|.++++|+.|+|++|++++.++..|..+++|+.|++++|++++.++.. + .+.++..+++.+|++.|.
T Consensus 555 ~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~ 624 (680)
T 1ziw_A 555 VFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCT 624 (680)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBC
T ss_pred HcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccC
Confidence 6888888888888888888777777788888888888888888765543 2 567888888999998886
No 282
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.95 E-value=6.5e-28 Score=248.33 Aligned_cols=229 Identities=24% Similarity=0.232 Sum_probs=181.4
Q ss_pred CCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCC
Q 047800 8 NLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRN 87 (547)
Q Consensus 8 ~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 87 (547)
.+++|++|++++|.++.+.+..|.++++|++|+|++|.|+ +..|..|.++++|++|+|++|+|+++.|..|+++++
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~----~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 118 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIE----EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPL 118 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCC----EECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCccc----ccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCC
Confidence 4689999999999999888888999999999999999999 445568899999999999999999988999999999
Q ss_pred CCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCCCC
Q 047800 88 LNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGP 167 (547)
Q Consensus 88 L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~~ 167 (547)
|++|+|++|+|+.+++. .|.++++|++|+|++|+++++.+.. +.+++ +|++|++++|++++.
T Consensus 119 L~~L~L~~n~l~~l~~~-----~~~~l~~L~~L~L~~n~l~~~~~~~-~~~l~------------~L~~L~l~~n~l~~~ 180 (390)
T 3o6n_A 119 LTVLVLERNDLSSLPRG-----IFHNTPKLTTLSMSNNNLERIEDDT-FQATT------------SLQNLQLSSNRLTHV 180 (390)
T ss_dssp CCEEECCSSCCCCCCTT-----TTTTCTTCCEEECCSSCCCBCCTTT-TSSCT------------TCCEEECCSSCCSBC
T ss_pred CCEEECCCCccCcCCHH-----HhcCCCCCcEEECCCCccCccChhh-ccCCC------------CCCEEECCCCcCCcc
Confidence 99999999999999887 7899999999999999999988776 44444 555566665555543
Q ss_pred CCcCCCCC-------------------------------------ccccccccccccccCccccCCCCCcchhcCCCCCE
Q 047800 168 LPLEIGNL-------------------------------------KGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNT 210 (547)
Q Consensus 168 ~p~~~~~l-------------------------------------~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~ 210 (547)
....+.++ ++|+.|++++|.+ ++ +..+..+++|++
T Consensus 181 ~~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~n~l------~~--~~~l~~l~~L~~ 252 (390)
T 3o6n_A 181 DLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNL------TD--TAWLLNYPGLVE 252 (390)
T ss_dssp CGGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECCCCSSCCEEECCSSCC------CC--CGGGGGCTTCSE
T ss_pred ccccccccceeecccccccccCCCCcceEEECCCCeeeeccccccccccEEECCCCCC------cc--cHHHcCCCCccE
Confidence 22211111 2334444444443 32 246778888888
Q ss_pred EECcCCcCCCCCCcchhCCCCCCeEeCCCCccccccCCCCccCCcchhcccCcccc
Q 047800 211 LNLSNNNLSGAIPISLEKLSYLDDLDLSFNKLEGEILRGGSFGNFLVELFEGNKLL 266 (547)
Q Consensus 211 L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~ 266 (547)
|+|++|.+++..|..|..+++|+.|++++|++++.+.....+.+++.+++.+|++.
T Consensus 253 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~L~~n~l~ 308 (390)
T 3o6n_A 253 VDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLL 308 (390)
T ss_dssp EECCSSCCCEEESGGGTTCSSCCEEECCSSCCCEEECSSSCCTTCCEEECCSSCCC
T ss_pred EECCCCcCCCcChhHccccccCCEEECCCCcCcccCcccCCCCCCCEEECCCCcce
Confidence 88888888887788888888888888888888876555566788888888888764
No 283
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.95 E-value=2.9e-28 Score=266.50 Aligned_cols=245 Identities=22% Similarity=0.234 Sum_probs=167.4
Q ss_pred CCc--ccCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCC-CcEEEccCCcccccC
Q 047800 2 IPP--EIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSK-LSILSLAKNSFSSFI 78 (547)
Q Consensus 2 ip~--~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~ 78 (547)
||. .|+++++|+.|+|++|+++|.+| .|..+++|++|+|++|+++ .+|..+.++++ |++|+|++|+|+. +
T Consensus 320 ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-----~lp~~l~~l~~~L~~L~Ls~N~l~~-l 392 (636)
T 4eco_A 320 FPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-----EIPANFCGFTEQVENLSFAHNKLKY-I 392 (636)
T ss_dssp CCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-----ECCTTSEEECTTCCEEECCSSCCSS-C
T ss_pred cCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-----cccHhhhhhcccCcEEEccCCcCcc-c
Confidence 566 77777777777777777776666 6777777777777777666 66666666666 6666666666663 5
Q ss_pred CccccCCC--CCCeeeccccccccccCchhhHhhhc-------CCCCCcEEeCcCCCCCCCCCcccccccC---------
Q 047800 79 PNTFGNLR--NLNELALHNNYLTSSTLELSFLSLLL-------NCKSLTHIGLSNNPLDGILHRTYMGNLS--------- 140 (547)
Q Consensus 79 ~~~~~~l~--~L~~L~L~~N~i~~~~~~~~~~~~~~-------~l~~L~~L~Ls~N~l~~~~~~~~~~~l~--------- 140 (547)
|..+..++ +|++|+|++|++++..+. .|. .+.+|++|+|++|+|+.++... +..++
T Consensus 393 p~~~~~~~l~~L~~L~Ls~N~l~~~~p~-----~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~-~~~l~~L~~L~Ls~ 466 (636)
T 4eco_A 393 PNIFDAKSVSVMSAIDFSYNEIGSVDGK-----NFDPLDPTPFKGINVSSINLSNNQISKFPKEL-FSTGSPLSSINLMG 466 (636)
T ss_dssp CSCCCTTCSSCEEEEECCSSCTTTTTTC-----SSCTTCSSCCCCCCEEEEECCSSCCCSCCTHH-HHTTCCCSEEECCS
T ss_pred chhhhhcccCccCEEECcCCcCCCcchh-----hhcccccccccCCCCCEEECcCCccCcCCHHH-HccCCCCCEEECCC
Confidence 55555433 566666666666655544 344 4455555555555555544432 11111
Q ss_pred ---cchhhhcc-------ccCCcccEEEccCCcCCCCCCcCCC--CCccccccccccccccCccccCCCCCcchhcCCCC
Q 047800 141 ---HSLEFFVM-------SYCNDILYLDLSSNFLTGPLPLEIG--NLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNN 208 (547)
Q Consensus 141 ---~~~~~~~~-------~~~~~L~~L~ls~N~l~~~~p~~~~--~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L 208 (547)
..++...+ +.|++|++|+|++|+|+ .+|..+. .+++|+.|+|++|.++ + +|..+..+++|
T Consensus 467 N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~------~-ip~~~~~l~~L 538 (636)
T 4eco_A 467 NMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFS------K-FPTQPLNSSTL 538 (636)
T ss_dssp SCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCS------S-CCCGGGGCSSC
T ss_pred CCCCCcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCC------C-cChhhhcCCCC
Confidence 01111111 22337889999999998 6677776 8889999999998884 4 78888899999
Q ss_pred CEEEC------cCCcCCCCCCcchhCCCCCCeEeCCCCccccccCCCCccCCcchhcccCccccccC
Q 047800 209 NTLNL------SNNNLSGAIPISLEKLSYLDDLDLSFNKLEGEILRGGSFGNFLVELFEGNKLLYGS 269 (547)
Q Consensus 209 ~~L~l------~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~c~~ 269 (547)
+.|+| ++|++.+.+|..+..+++|+.|++++|++. .+|.. -+.+++.+++.+|++.|-.
T Consensus 539 ~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~ip~~-~~~~L~~L~Ls~N~l~~~~ 603 (636)
T 4eco_A 539 KGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIR-KVNEK-ITPNISVLDIKDNPNISID 603 (636)
T ss_dssp CEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCCC-BCCSC-CCTTCCEEECCSCTTCEEE
T ss_pred CEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcCC-ccCHh-HhCcCCEEECcCCCCcccc
Confidence 99999 567788888989999999999999999994 44543 2378888999999887643
No 284
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.95 E-value=2.7e-27 Score=231.04 Aligned_cols=204 Identities=25% Similarity=0.323 Sum_probs=159.4
Q ss_pred CCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCe
Q 047800 11 NLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRNLNE 90 (547)
Q Consensus 11 ~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 90 (547)
+++.+++++|+|+. +|..+. ++|++|+|++|+|+ +..+..|.++++|++|+|++|+|+.+.+..|.++++|++
T Consensus 17 ~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~----~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~ 89 (270)
T 2o6q_A 17 NKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLS----SLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLET 89 (270)
T ss_dssp TTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCS----CCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCE
T ss_pred CCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCC----eeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCE
Confidence 56788888888884 454443 57888888888888 333447778888888888888888877777788888888
Q ss_pred eeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCCCCCCc
Q 047800 91 LALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGPLPL 170 (547)
Q Consensus 91 L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~ 170 (547)
|+|++|+|+++++. .|.++++|++|+|++|+++++.+.. +.+++ +|++|+|++|.|++..+.
T Consensus 90 L~l~~n~l~~~~~~-----~~~~l~~L~~L~l~~n~l~~~~~~~-~~~l~------------~L~~L~Ls~n~l~~~~~~ 151 (270)
T 2o6q_A 90 LWVTDNKLQALPIG-----VFDQLVNLAELRLDRNQLKSLPPRV-FDSLT------------KLTYLSLGYNELQSLPKG 151 (270)
T ss_dssp EECCSSCCCCCCTT-----TTTTCSSCCEEECCSSCCCCCCTTT-TTTCT------------TCCEEECCSSCCCCCCTT
T ss_pred EECCCCcCCcCCHh-----HcccccCCCEEECCCCccCeeCHHH-hCcCc------------CCCEEECCCCcCCccCHh
Confidence 88888888888776 6788888888888888888877665 45555 888888888888877666
Q ss_pred CCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCCccccc
Q 047800 171 EIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKLEGE 245 (547)
Q Consensus 171 ~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~ 245 (547)
.|.++++|+.|++++|.+ ++..+..|..+++|++|+|++|++++..+..|..+++|+.|++++|++...
T Consensus 152 ~~~~l~~L~~L~L~~n~l------~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 152 VFDKLTSLKELRLYNNQL------KRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp TTTTCTTCCEEECCSSCC------SCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred HccCCcccceeEecCCcC------cEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 788888888888888877 445556688888888888888888877777788888888888888887643
No 285
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.95 E-value=3.7e-28 Score=274.35 Aligned_cols=239 Identities=20% Similarity=0.197 Sum_probs=142.8
Q ss_pred CCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCCCC
Q 047800 10 HNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRNLN 89 (547)
Q Consensus 10 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 89 (547)
++|+.|+|++|.+.+..+..|..+++|+.|+|++|+|+ +..|..|.++++|++|+|++|+|+++.|..|.++++|+
T Consensus 266 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~----~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 341 (844)
T 3j0a_A 266 SSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKIN----KIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVA 341 (844)
T ss_dssp SCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCC----EECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCC
T ss_pred CCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCC----CCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCC
Confidence 45555555555555555555555555555555555555 33444555555555555555555555555555555555
Q ss_pred eeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCC-------------------ccc-------ccccCcch
Q 047800 90 ELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILH-------------------RTY-------MGNLSHSL 143 (547)
Q Consensus 90 ~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-------------------~~~-------~~~l~~~~ 143 (547)
+|+|++|+|+.+++. .|.++++|++|+|++|+|+++.. ... ..+--..+
T Consensus 342 ~L~L~~N~i~~~~~~-----~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l 416 (844)
T 3j0a_A 342 YIDLQKNHIAIIQDQ-----TFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENL 416 (844)
T ss_dssp EEECCSCCCCCCCSS-----CSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSS
T ss_pred EEECCCCCCCccChh-----hhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccC
Confidence 555555555555544 45555555555555555544321 000 00000000
Q ss_pred -hhhccccCCcccEEEccCCcCCCC------------------------------CCcCCCCCccccccccccccccCcc
Q 047800 144 -EFFVMSYCNDILYLDLSSNFLTGP------------------------------LPLEIGNLKGLVGVDFSMNNFSGYN 192 (547)
Q Consensus 144 -~~~~~~~~~~L~~L~ls~N~l~~~------------------------------~p~~~~~l~~L~~L~ls~N~~~~~n 192 (547)
....+..+++|+.|+|++|++++. .+..|.++++|+.|+|++|.+
T Consensus 417 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l---- 492 (844)
T 3j0a_A 417 DILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYL---- 492 (844)
T ss_dssp TTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHH----
T ss_pred chhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcc----
Confidence 011122344555555555555432 234455666666666666666
Q ss_pred ccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCCccccccCCCCccCCcchhcccCccccc
Q 047800 193 KLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKLEGEILRGGSFGNFLVELFEGNKLLY 267 (547)
Q Consensus 193 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~c 267 (547)
++..|+.|..+++|+.|+|++|++++.+|..+. ++|+.|++++|++++..+.. +.++..+++.+|++.|
T Consensus 493 --~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~--~~~L~~l~l~~Np~~C 561 (844)
T 3j0a_A 493 --NSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDV--FVSLSVLDITHNKFIC 561 (844)
T ss_dssp --TTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCC--CSSCCEEEEEEECCCC
T ss_pred --cccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhH--hCCcCEEEecCCCccc
Confidence 678888899999999999999999987777666 78999999999999877754 6688999999999998
No 286
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=9.2e-28 Score=260.87 Aligned_cols=235 Identities=24% Similarity=0.230 Sum_probs=179.5
Q ss_pred CCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCC
Q 047800 8 NLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRN 87 (547)
Q Consensus 8 ~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 87 (547)
.+.+++.|++++|.++.+++..|.++++|++|+|++|.|+ +..|..|.++++|+.|+|++|.|+++.|..|+++++
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~----~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 124 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIE----EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPL 124 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCC----EECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCC----CCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCC
Confidence 3578999999999999888888999999999999999999 556678999999999999999999999999999999
Q ss_pred CCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCCCC
Q 047800 88 LNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGP 167 (547)
Q Consensus 88 L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~~ 167 (547)
|++|+|++|.|+++++. .|.++++|++|+|++|.|+++++.. +.+++ +|++|+|++|.+++.
T Consensus 125 L~~L~L~~n~l~~l~~~-----~~~~l~~L~~L~Ls~N~l~~~~~~~-~~~l~------------~L~~L~L~~N~l~~~ 186 (597)
T 3oja_B 125 LTVLVLERNDLSSLPRG-----IFHNTPKLTTLSMSNNNLERIEDDT-FQATT------------SLQNLQLSSNRLTHV 186 (597)
T ss_dssp CCEEECCSSCCCCCCTT-----TTTTCTTCCEEECCSSCCCBCCTTT-TTTCT------------TCCEEECTTSCCSBC
T ss_pred CCEEEeeCCCCCCCCHH-----HhccCCCCCEEEeeCCcCCCCChhh-hhcCC------------cCcEEECcCCCCCCc
Confidence 99999999999999987 7899999999999999999998876 45555 566666666665543
Q ss_pred CCcCCCCC----------------ccccccccccccccC---------------ccccCCCCCcchhcCCCCCEEECcCC
Q 047800 168 LPLEIGNL----------------KGLVGVDFSMNNFSG---------------YNKLQGSIPESFGDLSNNNTLNLSNN 216 (547)
Q Consensus 168 ~p~~~~~l----------------~~L~~L~ls~N~~~~---------------~n~l~~~~p~~~~~l~~L~~L~l~~N 216 (547)
.+..+.++ ++|+.|++++|.++. .|.+++ +..+..+++|+.|+|++|
T Consensus 187 ~~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N 264 (597)
T 3oja_B 187 DLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYN 264 (597)
T ss_dssp CGGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSCCSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSS
T ss_pred ChhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccccCCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCC
Confidence 22222111 112222222222210 022233 356777788888888888
Q ss_pred cCCCCCCcchhCCCCCCeEeCCCCccccccCCCCccCCcchhcccCcccc
Q 047800 217 NLSGAIPISLEKLSYLDDLDLSFNKLEGEILRGGSFGNFLVELFEGNKLL 266 (547)
Q Consensus 217 ~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~ 266 (547)
.+++.+|..|..+++|+.|+|++|.+++.+...+.+.++..+++.+|.+.
T Consensus 265 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~Ls~N~l~ 314 (597)
T 3oja_B 265 ELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLL 314 (597)
T ss_dssp CCCEEESGGGTTCSSCCEEECTTSCCCEEECSSSCCTTCCEEECCSSCCC
T ss_pred ccCCCCHHHhcCccCCCEEECCCCCCCCCCcccccCCCCcEEECCCCCCC
Confidence 88877777788888888888888888776555566777777777777764
No 287
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.95 E-value=2.8e-28 Score=265.62 Aligned_cols=244 Identities=20% Similarity=0.135 Sum_probs=156.6
Q ss_pred ccCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccC--Cccc
Q 047800 5 EIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFI--PNTF 82 (547)
Q Consensus 5 ~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--~~~~ 82 (547)
.+..+++|+.|++++|++. .+| .+ .+++|++|++++|+.. +.+ .+..+++|++|+|++|++++.. |..+
T Consensus 302 ~l~~~~~L~~L~l~~n~l~-~lp-~~-~l~~L~~L~l~~n~~~----~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~ 372 (606)
T 3vq2_A 302 DVPKHFKWQSLSIIRCQLK-QFP-TL-DLPFLKSLTLTMNKGS----ISF--KKVALPSLSYLDLSRNALSFSGCCSYSD 372 (606)
T ss_dssp CCCTTCCCSEEEEESCCCS-SCC-CC-CCSSCCEEEEESCSSC----EEC--CCCCCTTCCEEECCSSCEEEEEECCHHH
T ss_pred hccccccCCEEEcccccCc-ccc-cC-CCCccceeeccCCcCc----cch--hhccCCCCCEEECcCCccCCCcchhhhh
Confidence 5677777777777777773 455 33 5666666666665333 122 3344555555555555555431 4444
Q ss_pred cCCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCc------------chhhhcccc
Q 047800 83 GNLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSH------------SLEFFVMSY 150 (547)
Q Consensus 83 ~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~------------~~~~~~~~~ 150 (547)
..+++|++|+|++|.+++++. .|.++++|++|++++|+++++.+...+.+++. ......++.
T Consensus 373 ~~~~~L~~L~L~~n~l~~~~~------~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 446 (606)
T 3vq2_A 373 LGTNSLRHLDLSFNGAIIMSA------NFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLG 446 (606)
T ss_dssp HCCSCCCEEECCSCSEEEECC------CCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTT
T ss_pred ccCCcccEeECCCCccccchh------hccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcC
Confidence 555555555555555544432 34444455555555554444433111222220 001112334
Q ss_pred CCcccEEEccCCcCCC-CCCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCC
Q 047800 151 CNDILYLDLSSNFLTG-PLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKL 229 (547)
Q Consensus 151 ~~~L~~L~ls~N~l~~-~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 229 (547)
+++|++|++++|.+++ .+|..|.++++|+.|++++|.+ ++..|+.|..+++|++|+|++|++++..|..|..+
T Consensus 447 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l------~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 520 (606)
T 3vq2_A 447 LTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQL------EQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQL 520 (606)
T ss_dssp CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCC------CEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTC
T ss_pred CCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcC------CccChhhhcccccCCEEECCCCcCCCcCHHHccCC
Confidence 4488888888888876 4677888888888888888877 56778889999999999999999998889999999
Q ss_pred CCCCeEeCCCCccccccCCCCccC-CcchhcccCccccccC
Q 047800 230 SYLDDLDLSFNKLEGEILRGGSFG-NFLVELFEGNKLLYGS 269 (547)
Q Consensus 230 ~~L~~l~l~~N~l~~~~~~~~~~~-~l~~l~l~~N~~~c~~ 269 (547)
++|+.|++++|+++..+.....+. +++.+++.+|++.|..
T Consensus 521 ~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~c 561 (606)
T 3vq2_A 521 YSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACIC 561 (606)
T ss_dssp TTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCSS
T ss_pred CcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccCC
Confidence 999999999999996555545565 5888999999998853
No 288
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=1.6e-28 Score=245.56 Aligned_cols=223 Identities=21% Similarity=0.160 Sum_probs=190.9
Q ss_pred ccCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccC
Q 047800 5 EIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGN 84 (547)
Q Consensus 5 ~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 84 (547)
.+..+++|++|+|++|+|++..|..|.++++|++|+|++|+++ .+++ +..+++|++|+|++|+|+++. .
T Consensus 29 ~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-----~~~~-~~~l~~L~~L~Ls~n~l~~l~-----~ 97 (317)
T 3o53_A 29 LRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLY-----ETLD-LESLSTLRTLDLNNNYVQELL-----V 97 (317)
T ss_dssp HHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCE-----EEEE-ETTCTTCCEEECCSSEEEEEE-----E
T ss_pred HhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCC-----cchh-hhhcCCCCEEECcCCcccccc-----C
Confidence 3456779999999999999988899999999999999999998 3443 889999999999999999844 3
Q ss_pred CCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcC
Q 047800 85 LRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFL 164 (547)
Q Consensus 85 l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l 164 (547)
.++|++|++++|+|+++++. .+++|++|++++|+|+++.+.. +..++ +|++|++++|.+
T Consensus 98 ~~~L~~L~l~~n~l~~~~~~--------~~~~L~~L~l~~N~l~~~~~~~-~~~l~------------~L~~L~Ls~N~l 156 (317)
T 3o53_A 98 GPSIETLHAANNNISRVSCS--------RGQGKKNIYLANNKITMLRDLD-EGCRS------------RVQYLDLKLNEI 156 (317)
T ss_dssp CTTCCEEECCSSCCSEEEEC--------CCSSCEEEECCSSCCCSGGGBC-TGGGS------------SEEEEECTTSCC
T ss_pred CCCcCEEECCCCccCCcCcc--------ccCCCCEEECCCCCCCCccchh-hhccC------------CCCEEECCCCCC
Confidence 48999999999999998765 3678999999999999987766 45555 999999999999
Q ss_pred CCCCCcCCC-CCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCCccc
Q 047800 165 TGPLPLEIG-NLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKLE 243 (547)
Q Consensus 165 ~~~~p~~~~-~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~ 243 (547)
++..+..+. .+++|+.|++++|.++ .+| ....+++|++|+|++|++++.++ .+..+++|+.|++++|+++
T Consensus 157 ~~~~~~~~~~~l~~L~~L~L~~N~l~-------~~~-~~~~l~~L~~L~Ls~N~l~~l~~-~~~~l~~L~~L~L~~N~l~ 227 (317)
T 3o53_A 157 DTVNFAELAASSDTLEHLNLQYNFIY-------DVK-GQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLV 227 (317)
T ss_dssp CEEEGGGGGGGTTTCCEEECTTSCCC-------EEE-CCCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCC
T ss_pred CcccHHHHhhccCcCCEEECCCCcCc-------ccc-cccccccCCEEECCCCcCCcchh-hhcccCcccEEECcCCccc
Confidence 987777774 7899999999999995 222 23358999999999999996544 5999999999999999999
Q ss_pred cccCCCCccCCcchhcccCcccccc
Q 047800 244 GEILRGGSFGNFLVELFEGNKLLYG 268 (547)
Q Consensus 244 ~~~~~~~~~~~l~~l~l~~N~~~c~ 268 (547)
+.+.....+.+++.+++.+|++.|+
T Consensus 228 ~l~~~~~~l~~L~~L~l~~N~~~~~ 252 (317)
T 3o53_A 228 LIEKALRFSQNLEHFDLRGNGFHCG 252 (317)
T ss_dssp EECTTCCCCTTCCEEECTTCCCBHH
T ss_pred chhhHhhcCCCCCEEEccCCCccCc
Confidence 7655557788999999999999875
No 289
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.95 E-value=2.8e-27 Score=255.47 Aligned_cols=116 Identities=20% Similarity=0.189 Sum_probs=71.6
Q ss_pred ccCCcccEEEccCCcCCCCCCcCCCCCccccccccccccccCc--------------------cccCCCCCc-chhcCCC
Q 047800 149 SYCNDILYLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSGY--------------------NKLQGSIPE-SFGDLSN 207 (547)
Q Consensus 149 ~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~--------------------n~l~~~~p~-~~~~l~~ 207 (547)
+.+++|++|++++|++++.+|..+.++++|+.|++++|.+++. |.+++.+|. .|..+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 5677889999999999888888888999999999999888631 344442332 2444444
Q ss_pred CCEEECcCCcCCCCCCcchhCCCCCCeEeCCCCccccccCCCCccCCcchhcccCcccc
Q 047800 208 NNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKLEGEILRGGSFGNFLVELFEGNKLL 266 (547)
Q Consensus 208 L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~ 266 (547)
|+.|+|++|++++..|..+. ++|+.|++++|+++..+...+.+.+++.+++.+|.+.
T Consensus 430 L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~ 486 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQLK 486 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCCCCTTTTSSCCCSEEECCSSCCC
T ss_pred CCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCcccChhhcCCCCCCEEECCCCCCC
Confidence 44444444444333222221 4566666666666644444455666666777776665
No 290
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.95 E-value=6.5e-28 Score=272.37 Aligned_cols=250 Identities=22% Similarity=0.179 Sum_probs=155.2
Q ss_pred CcccCCCCCCcEEEccCCccc-cCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCcc
Q 047800 3 PPEIGNLHNLEYLGFGHNKLV-GVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNT 81 (547)
Q Consensus 3 p~~~~~l~~L~~L~Ls~N~i~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 81 (547)
|..|+++++|++|+|++|.+. .+.|..|.++++|++|+|++|.|+ +..|..|.++++|++|+|++|.+++..|..
T Consensus 41 ~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~ 116 (844)
T 3j0a_A 41 ASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIY----FLHPDAFQGLFHLFELRLYFCGLSDAVLKD 116 (844)
T ss_dssp SSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCC----EECTTSSCSCSSCCCEECTTCCCSSCCSTT
T ss_pred hhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCc----ccCHhHccCCcccCEeeCcCCCCCcccccC
Confidence 445555566666666555332 233555555566666666665555 344555555555555555555555533332
Q ss_pred --ccCCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCccc------------------------
Q 047800 82 --FGNLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTY------------------------ 135 (547)
Q Consensus 82 --~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~------------------------ 135 (547)
|+++++|++|+|++|.+++.++. ..|.++++|++|+|++|+++++.+..+
T Consensus 117 ~~~~~L~~L~~L~Ls~N~l~~~~~~----~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~ 192 (844)
T 3j0a_A 117 GYFRNLKALTRLDLSKNQIRSLYLH----PSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSV 192 (844)
T ss_dssp CCCSSCSSCCEEEEESCCCCCCCCC----GGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCC
T ss_pred ccccccCCCCEEECCCCcccccccc----hhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCcccccccc
Confidence 55555555555555555554431 135555555555555555554433321
Q ss_pred --------------------------------ccccCc-----------------------chhhhcccc--CCcccEEE
Q 047800 136 --------------------------------MGNLSH-----------------------SLEFFVMSY--CNDILYLD 158 (547)
Q Consensus 136 --------------------------------~~~l~~-----------------------~~~~~~~~~--~~~L~~L~ 158 (547)
...+.. ......|.+ +++|+.|+
T Consensus 193 ~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~ 272 (844)
T 3j0a_A 193 DWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLD 272 (844)
T ss_dssp CCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEE
T ss_pred chhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEE
Confidence 100000 000011112 25788888
Q ss_pred ccCCcCCCCCCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCC
Q 047800 159 LSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLS 238 (547)
Q Consensus 159 ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~ 238 (547)
+++|.+++..|..|.++++|+.|+|++|.+ ++..|++|..+++|++|+|++|++++..|..|..+++|+.|+++
T Consensus 273 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i------~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 346 (844)
T 3j0a_A 273 LSHGFVFSLNSRVFETLKDLKVLNLAYNKI------NKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQ 346 (844)
T ss_dssp CTTCCCCEECSCCSSSCCCCCEEEEESCCC------CEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECC
T ss_pred CCCCcccccChhhhhcCCCCCEEECCCCcC------CCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECC
Confidence 888888877788888888888888888887 55677788888888888888888887778888888888888888
Q ss_pred CCccccccCCC-CccCCcchhcccCcccc
Q 047800 239 FNKLEGEILRG-GSFGNFLVELFEGNKLL 266 (547)
Q Consensus 239 ~N~l~~~~~~~-~~~~~l~~l~l~~N~~~ 266 (547)
+|.+.+..+.. ..+.+++.+++.+|.+.
T Consensus 347 ~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~ 375 (844)
T 3j0a_A 347 KNHIAIIQDQTFKFLEKLQTLDLRDNALT 375 (844)
T ss_dssp SCCCCCCCSSCSCSCCCCCEEEEETCCSC
T ss_pred CCCCCccChhhhcCCCCCCEEECCCCCCC
Confidence 88887666554 55777888888888764
No 291
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=2.9e-29 Score=250.39 Aligned_cols=223 Identities=24% Similarity=0.282 Sum_probs=135.1
Q ss_pred CcEEEccCCccc-cCCChhhc-------CCCCCCEEEcccccCCCCCCCCCCccc--cCCCCCcEEEccCCcccccCCcc
Q 047800 12 LEYLGFGHNKLV-GVVPATIF-------NLSTLKHLELYNNSLSGSLSGTIPRFI--FNSSKLSILSLAKNSFSSFIPNT 81 (547)
Q Consensus 12 L~~L~Ls~N~i~-~~~~~~~~-------~l~~L~~L~L~~N~l~~~~~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~~~~ 81 (547)
|+.|+|++|+|+ ...|..+. ++++|++|+|++|+|+ +.+|..+ ..+++|++|+|++|+|+++ |..
T Consensus 65 L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~----~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~ 139 (312)
T 1wwl_A 65 IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVT----GTAPPPLLEATGPDLNILNLRNVSWATR-DAW 139 (312)
T ss_dssp HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCB----SCCCCCSSSCCSCCCSEEEEESCBCSSS-SSH
T ss_pred HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCccc----chhHHHHHHhcCCCccEEEccCCCCcch-hHH
Confidence 566666666663 33444444 5667777777777766 5666654 5667777777777777764 666
Q ss_pred ccCC-----CCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCC---CcccccccCcchhhhccccCCc
Q 047800 82 FGNL-----RNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGIL---HRTYMGNLSHSLEFFVMSYCND 153 (547)
Q Consensus 82 ~~~l-----~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~---~~~~~~~l~~~~~~~~~~~~~~ 153 (547)
|+.+ ++|++|+|++|+|+++++. .|.++++|++|+|++|++.+.. ....+.++ ++
T Consensus 140 ~~~l~~~~~~~L~~L~L~~N~l~~~~~~-----~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l------------~~ 202 (312)
T 1wwl_A 140 LAELQQWLKPGLKVLSIAQAHSLNFSCE-----QVRVFPALSTLDLSDNPELGERGLISALCPLKF------------PT 202 (312)
T ss_dssp HHHHHTTCCTTCCEEEEESCSCCCCCTT-----TCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSC------------TT
T ss_pred HHHHHHhhcCCCcEEEeeCCCCccchHH-----HhccCCCCCEEECCCCCcCcchHHHHHHHhccC------------CC
Confidence 6665 6677777777777666655 5666777777777777665431 11111233 36
Q ss_pred ccEEEccCCcCCCC---CCcCCCCCccccccccccccccCccccCCCCC-cchhcCCCCCEEECcCCcCCCCCCcchhCC
Q 047800 154 ILYLDLSSNFLTGP---LPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIP-ESFGDLSNNNTLNLSNNNLSGAIPISLEKL 229 (547)
Q Consensus 154 L~~L~ls~N~l~~~---~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 229 (547)
|++|+|++|+|++. ....+.++++|+.|++++|.+ ++..| ..+..+++|++|+|++|+++ .+|..+.
T Consensus 203 L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l------~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~-- 273 (312)
T 1wwl_A 203 LQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSL------RDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP-- 273 (312)
T ss_dssp CCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCC------CSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--
T ss_pred CCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcC------CcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--
Confidence 77777777776621 112334556677777777766 33333 34555667777777777776 4454444
Q ss_pred CCCCeEeCCCCccccccCCCCccCCcchhcccCcccc
Q 047800 230 SYLDDLDLSFNKLEGEILRGGSFGNFLVELFEGNKLL 266 (547)
Q Consensus 230 ~~L~~l~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~ 266 (547)
++|+.||+++|++++. |....+.+++.+++.+|++.
T Consensus 274 ~~L~~L~Ls~N~l~~~-p~~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 274 AKLSVLDLSYNRLDRN-PSPDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp SEEEEEECCSSCCCSC-CCTTTSCEEEEEECTTCTTT
T ss_pred CCceEEECCCCCCCCC-hhHhhCCCCCEEeccCCCCC
Confidence 6667777777777655 33455666666777777653
No 292
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.95 E-value=6.4e-27 Score=228.37 Aligned_cols=204 Identities=23% Similarity=0.260 Sum_probs=184.4
Q ss_pred CCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCeeeccccccccccCchhhHhhhcC
Q 047800 34 STLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRNLNELALHNNYLTSSTLELSFLSLLLN 113 (547)
Q Consensus 34 ~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~ 113 (547)
.+++.+++++|+|+ .+|..+. ++|++|+|++|+|+++.+..|.++++|++|+|++|+|+.+++. .|.+
T Consensus 16 ~~~~~l~~~~~~l~-----~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~-----~~~~ 83 (270)
T 2o6q_A 16 NNKNSVDCSSKKLT-----AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAG-----IFKE 83 (270)
T ss_dssp TTTTEEECTTSCCS-----SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTT-----TTSS
T ss_pred CCCCEEEccCCCCC-----ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChh-----hhcC
Confidence 35789999999999 7887665 6899999999999998888999999999999999999999887 7899
Q ss_pred CCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCCCCCCcCCCCCccccccccccccccCccc
Q 047800 114 CKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNK 193 (547)
Q Consensus 114 l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~ 193 (547)
+++|++|+|++|+|+.+++.. +..++ +|++|++++|++++..+..|.++++|+.|++++|.+
T Consensus 84 l~~L~~L~l~~n~l~~~~~~~-~~~l~------------~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l----- 145 (270)
T 2o6q_A 84 LKNLETLWVTDNKLQALPIGV-FDQLV------------NLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNEL----- 145 (270)
T ss_dssp CTTCCEEECCSSCCCCCCTTT-TTTCS------------SCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC-----
T ss_pred CCCCCEEECCCCcCCcCCHhH-ccccc------------CCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcC-----
Confidence 999999999999999988765 55555 999999999999988888999999999999999998
Q ss_pred cCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCCccccccCCC-CccCCcchhcccCcccccc
Q 047800 194 LQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKLEGEILRG-GSFGNFLVELFEGNKLLYG 268 (547)
Q Consensus 194 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~c~ 268 (547)
++..+..|..+++|+.|+|++|++++..+..|..+++|+.|++++|++++.++.. ..+.++..+++.+|++.|.
T Consensus 146 -~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 146 -QSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp -CCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred -CccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 4566667999999999999999999888888999999999999999999876654 5688999999999999885
No 293
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.95 E-value=3.8e-27 Score=232.31 Aligned_cols=203 Identities=22% Similarity=0.195 Sum_probs=109.3
Q ss_pred cCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCC
Q 047800 6 IGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNL 85 (547)
Q Consensus 6 ~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 85 (547)
++++++++.+++++|+|+.+ |..+. ++|+.|+|++|+|+ +..|..|.++++|+.|+|++|.|+++.+. +.+
T Consensus 6 ~~~l~~l~~l~~~~~~l~~i-p~~~~--~~l~~L~L~~N~l~----~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l 76 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTAL-PPDLP--KDTTILHLSENLLY----TFSLATLMPYTRLTQLNLDRAELTKLQVD--GTL 76 (290)
T ss_dssp EECSTTCCEEECTTSCCSSC-CSCCC--TTCCEEECTTSCCS----EEEGGGGTTCTTCCEEECTTSCCCEEECC--SCC
T ss_pred ccccCCccEEECCCCCCCcC-CCCCC--CCCCEEEcCCCcCC----ccCHHHhhcCCCCCEEECCCCccCcccCC--CCC
Confidence 45566666666666666532 33222 45566666666665 33345555666666666666666653332 455
Q ss_pred CCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCC
Q 047800 86 RNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLT 165 (547)
Q Consensus 86 ~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~ 165 (547)
++|++|+|++|+|+.++. .+.++++|++|+|++|+|+++++.. +..++ +|++|+|++|+|+
T Consensus 77 ~~L~~L~Ls~N~l~~l~~------~~~~l~~L~~L~l~~N~l~~l~~~~-~~~l~------------~L~~L~L~~N~l~ 137 (290)
T 1p9a_G 77 PVLGTLDLSHNQLQSLPL------LGQTLPALTVLDVSFNRLTSLPLGA-LRGLG------------ELQELYLKGNELK 137 (290)
T ss_dssp TTCCEEECCSSCCSSCCC------CTTTCTTCCEEECCSSCCCCCCSST-TTTCT------------TCCEEECTTSCCC
T ss_pred CcCCEEECCCCcCCcCch------hhccCCCCCEEECCCCcCcccCHHH-HcCCC------------CCCEEECCCCCCC
Confidence 666666666666655443 3455555666666666655555444 33333 5555556555555
Q ss_pred CCCCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCCccc
Q 047800 166 GPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKLE 243 (547)
Q Consensus 166 ~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~ 243 (547)
+.++..|..+++|+.|+|++|.+ ++..++.|..+++|+.|+|++|+++ .+|..+..+.+|+.|++++|++.
T Consensus 138 ~~~~~~~~~l~~L~~L~L~~N~l------~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 138 TLPPGLLTPTPKLEKLSLANNNL------TELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CCCTTTTTTCTTCCEEECTTSCC------SCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred ccChhhcccccCCCEEECCCCcC------CccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 55555555555555555555555 2333344555555555555555555 33444444455555555555544
No 294
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=1.5e-28 Score=245.26 Aligned_cols=208 Identities=21% Similarity=0.225 Sum_probs=176.6
Q ss_pred CCCCCcEEEccCCccccCCChhh--cCCCCCCEEEcccccCCCCCCCCCCccccCC-----CCCcEEEccCCcccccCCc
Q 047800 8 NLHNLEYLGFGHNKLVGVVPATI--FNLSTLKHLELYNNSLSGSLSGTIPRFIFNS-----SKLSILSLAKNSFSSFIPN 80 (547)
Q Consensus 8 ~l~~L~~L~Ls~N~i~~~~~~~~--~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~~~ 80 (547)
++++|++|+|++|+|++..|..+ ..+++|++|+|++|+|+ .+|..+..+ ++|++|+|++|+|+++.|.
T Consensus 93 ~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-----~~~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~ 167 (312)
T 1wwl_A 93 GISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWA-----TRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCE 167 (312)
T ss_dssp TTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCS-----SSSSHHHHHHTTCCTTCCEEEEESCSCCCCCTT
T ss_pred CcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCc-----chhHHHHHHHHhhcCCCcEEEeeCCCCccchHH
Confidence 79999999999999999888886 99999999999999999 448888777 9999999999999998889
Q ss_pred cccCCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCC--cccccccCcchhhhccccCCcccEEE
Q 047800 81 TFGNLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILH--RTYMGNLSHSLEFFVMSYCNDILYLD 158 (547)
Q Consensus 81 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--~~~~~~l~~~~~~~~~~~~~~L~~L~ 158 (547)
.|+++++|++|+|++|++.+..+... .-.+..+++|++|+|++|+|+++.. ..++.+++ +|++|+
T Consensus 168 ~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~------------~L~~L~ 234 (312)
T 1wwl_A 168 QVRVFPALSTLDLSDNPELGERGLIS-ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARV------------QLQGLD 234 (312)
T ss_dssp TCCCCSSCCEEECCSCTTCHHHHHHH-HSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTC------------CCSEEE
T ss_pred HhccCCCCCEEECCCCCcCcchHHHH-HHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCC------------CCCEEE
Confidence 99999999999999999876421100 0024889999999999999985432 11123334 999999
Q ss_pred ccCCcCCCCCC-cCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeC
Q 047800 159 LSSNFLTGPLP-LEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDL 237 (547)
Q Consensus 159 ls~N~l~~~~p-~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l 237 (547)
|++|++++.+| ..+..+++|+.|+|++|.++ .+|..+. ++|++|+|++|+|++. |. +..+++|+.|++
T Consensus 235 Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-------~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L 303 (312)
T 1wwl_A 235 LSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-------QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSL 303 (312)
T ss_dssp CTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-------SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEEC
T ss_pred CCCCcCCcccchhhhhhcCCCCEEECCCCccC-------hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEec
Confidence 99999998775 56777899999999999995 6777665 8999999999999976 65 999999999999
Q ss_pred CCCcccc
Q 047800 238 SFNKLEG 244 (547)
Q Consensus 238 ~~N~l~~ 244 (547)
++|++++
T Consensus 304 ~~N~l~~ 310 (312)
T 1wwl_A 304 KGNPFLD 310 (312)
T ss_dssp TTCTTTC
T ss_pred cCCCCCC
Confidence 9999985
No 295
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.95 E-value=1.9e-28 Score=248.84 Aligned_cols=221 Identities=17% Similarity=0.210 Sum_probs=181.5
Q ss_pred cccCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCcc-ccCCCCCcEEEccCCcccccCC-cc
Q 047800 4 PEIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRF-IFNSSKLSILSLAKNSFSSFIP-NT 81 (547)
Q Consensus 4 ~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~~-~~ 81 (547)
.+|+++++|+.|+|++|+|+++.+..|.++++|++|+|++|+|+ .+|.. +.++++|++|+|++|+|+++.+ ..
T Consensus 70 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-----~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~ 144 (353)
T 2z80_A 70 SDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLS-----NLSSSWFKPLSSLTFLNLLGNPYKTLGETSL 144 (353)
T ss_dssp TTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCS-----SCCHHHHTTCTTCSEEECTTCCCSSSCSSCS
T ss_pred HHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCC-----cCCHhHhCCCccCCEEECCCCCCcccCchhh
Confidence 47999999999999999999999999999999999999999999 56655 7899999999999999998655 58
Q ss_pred ccCCCCCCeeecccc-ccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEcc
Q 047800 82 FGNLRNLNELALHNN-YLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLS 160 (547)
Q Consensus 82 ~~~l~~L~~L~L~~N-~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls 160 (547)
|.++++|++|++++| .++.+++. .|.++++|++|++++|+++++.+.. +.+++ +|++|+++
T Consensus 145 ~~~l~~L~~L~l~~n~~~~~~~~~-----~~~~l~~L~~L~l~~n~l~~~~~~~-l~~l~------------~L~~L~l~ 206 (353)
T 2z80_A 145 FSHLTKLQILRVGNMDTFTKIQRK-----DFAGLTFLEELEIDASDLQSYEPKS-LKSIQ------------NVSHLILH 206 (353)
T ss_dssp CTTCTTCCEEEEEESSSCCEECTT-----TTTTCCEEEEEEEEETTCCEECTTT-TTTCS------------EEEEEEEE
T ss_pred hccCCCCcEEECCCCccccccCHH-----HccCCCCCCEEECCCCCcCccCHHH-Hhccc------------cCCeecCC
Confidence 999999999999999 58888776 7999999999999999999887766 45555 77777777
Q ss_pred CCcCCCCCCcCCCCCccccccccccccccCcc---------------------ccCC----CCCcchhcCCCCCEEECcC
Q 047800 161 SNFLTGPLPLEIGNLKGLVGVDFSMNNFSGYN---------------------KLQG----SIPESFGDLSNNNTLNLSN 215 (547)
Q Consensus 161 ~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n---------------------~l~~----~~p~~~~~l~~L~~L~l~~ 215 (547)
+|.++...+..+..+++|+.|++++|.+++.. .+.+ .+|+.+..+++|+.|+|++
T Consensus 207 ~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~ 286 (353)
T 2z80_A 207 MKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSR 286 (353)
T ss_dssp CSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCS
T ss_pred CCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCC
Confidence 77776443333445677777777777765320 0011 3566789999999999999
Q ss_pred CcCCCCCCcchhCCCCCCeEeCCCCccccccC
Q 047800 216 NNLSGAIPISLEKLSYLDDLDLSFNKLEGEIL 247 (547)
Q Consensus 216 N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 247 (547)
|+++..++..|..+++|+.|++++|++.+..+
T Consensus 287 N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 287 NQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 99996555567999999999999999997654
No 296
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.95 E-value=6.7e-28 Score=269.07 Aligned_cols=214 Identities=19% Similarity=0.205 Sum_probs=159.9
Q ss_pred CChhhcCCCCCCEEEcccccCCCCCCC-----------------CCCcccc--CCCCCcEEEccCCcccccCCccccCCC
Q 047800 26 VPATIFNLSTLKHLELYNNSLSGSLSG-----------------TIPRFIF--NSSKLSILSLAKNSFSSFIPNTFGNLR 86 (547)
Q Consensus 26 ~~~~~~~l~~L~~L~L~~N~l~~~~~~-----------------~~p~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 86 (547)
+|..|+++++|++|+|++|+|+ + .+|+.++ ++++|+.|+|++|++.+.+|..|++++
T Consensus 440 IP~~l~~L~~L~~L~Ls~N~Ls----g~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~ 515 (876)
T 4ecn_A 440 ISKAIQRLTKLQIIYFANSPFT----YDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLP 515 (876)
T ss_dssp ECGGGGGCTTCCEEEEESCCCC----GGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCS
T ss_pred hhHHHhcCCCCCEEECcCCcCC----CCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCC
Confidence 6778888888888888888888 4 2888877 888888888888888888888888888
Q ss_pred CCCeeeccccc-ccc--ccCchhhHh-hhcCCCCCcEEeCcCCCCCCCCC-cccccccCcchhhhccccCCcccEEEccC
Q 047800 87 NLNELALHNNY-LTS--STLELSFLS-LLLNCKSLTHIGLSNNPLDGILH-RTYMGNLSHSLEFFVMSYCNDILYLDLSS 161 (547)
Q Consensus 87 ~L~~L~L~~N~-i~~--~~~~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~~l~~~~~~~~~~~~~~L~~L~ls~ 161 (547)
+|++|+|++|+ +++ +|..+.... .+..+++|++|+|++|+|+.++. .. +.+++ +|+.|+|++
T Consensus 516 ~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~~~~-l~~L~------------~L~~L~Ls~ 582 (876)
T 4ecn_A 516 ELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASAS-LQKMV------------KLGLLDCVH 582 (876)
T ss_dssp SCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCCHHH-HTTCT------------TCCEEECTT
T ss_pred CCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCccCChhh-hhcCC------------CCCEEECCC
Confidence 88888888887 776 333211111 34455688888888888885544 13 45555 788888888
Q ss_pred CcCCCCCCcCCCCCccccccccccccccCccccCCCCCcchhcCCC-CCEEECcCCcCCCCCCcchhCCCC--CCeEeCC
Q 047800 162 NFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSN-NNTLNLSNNNLSGAIPISLEKLSY--LDDLDLS 238 (547)
Q Consensus 162 N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~-L~~L~l~~N~l~~~~~~~~~~l~~--L~~l~l~ 238 (547)
|+++ .+| .|+++++|+.|+|++|.++ .+|+.+..+++ |+.|+|++|+++ .+|..+..++. |+.|+++
T Consensus 583 N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-------~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls 652 (876)
T 4ecn_A 583 NKVR-HLE-AFGTNVKLTDLKLDYNQIE-------EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFS 652 (876)
T ss_dssp SCCC-BCC-CCCTTSEESEEECCSSCCS-------CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECC
T ss_pred CCcc-cch-hhcCCCcceEEECcCCccc-------cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECc
Confidence 8888 666 7888888888888888874 67777888887 888888888887 66777766654 8888888
Q ss_pred CCccccccCCCC------ccCCcchhcccCcccc
Q 047800 239 FNKLEGEILRGG------SFGNFLVELFEGNKLL 266 (547)
Q Consensus 239 ~N~l~~~~~~~~------~~~~l~~l~l~~N~~~ 266 (547)
+|++.+.++... ...++..+++.+|.+.
T Consensus 653 ~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~ 686 (876)
T 4ecn_A 653 YNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ 686 (876)
T ss_dssp SSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC
T ss_pred CCcCCCccccchhhhccccCCCcCEEEccCCcCC
Confidence 888877554321 2336777777777764
No 297
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.95 E-value=1e-27 Score=267.59 Aligned_cols=240 Identities=20% Similarity=0.201 Sum_probs=168.1
Q ss_pred CCcccCCCCCCcEEEccCCcccc-----------------CCChhhc--CCCCCCEEEcccccCCCCCCCCCCccccCCC
Q 047800 2 IPPEIGNLHNLEYLGFGHNKLVG-----------------VVPATIF--NLSTLKHLELYNNSLSGSLSGTIPRFIFNSS 62 (547)
Q Consensus 2 ip~~~~~l~~L~~L~Ls~N~i~~-----------------~~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~ 62 (547)
||++|+++++|+.|+|++|+|++ .+|..++ ++++|++|+|++|++. +.+|..|++++
T Consensus 440 IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~----~~iP~~l~~L~ 515 (876)
T 4ecn_A 440 ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNM----TQLPDFLYDLP 515 (876)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTC----CSCCGGGGGCS
T ss_pred hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCC----ccChHHHhCCC
Confidence 78999999999999999999998 3788877 9999999999999998 79999999999
Q ss_pred CCcEEEccCCc-ccc-cCCccccCCC-------CCCeeeccccccccccC-chhhHhhhcCCCCCcEEeCcCCCCCCCCC
Q 047800 63 KLSILSLAKNS-FSS-FIPNTFGNLR-------NLNELALHNNYLTSSTL-ELSFLSLLLNCKSLTHIGLSNNPLDGILH 132 (547)
Q Consensus 63 ~L~~L~Ls~N~-l~~-~~~~~~~~l~-------~L~~L~L~~N~i~~~~~-~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 132 (547)
+|+.|+|++|+ |++ .+|..|+.++ +|++|+|++|+|+.+|. . .|.++++|+.|+|++|+|+.++
T Consensus 516 ~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~~~-----~l~~L~~L~~L~Ls~N~l~~lp- 589 (876)
T 4ecn_A 516 ELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASA-----SLQKMVKLGLLDCVHNKVRHLE- 589 (876)
T ss_dssp SCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCCHH-----HHTTCTTCCEEECTTSCCCBCC-
T ss_pred CCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCccCChh-----hhhcCCCCCEEECCCCCcccch-
Confidence 99999999998 998 7888776665 99999999999997776 2 5889999999999999999655
Q ss_pred cccccccCcchhhhccccCCcccEEEccCCcCCCCCCcCCCCCcc-ccccccccccccCc-------------------c
Q 047800 133 RTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGPLPLEIGNLKG-LVGVDFSMNNFSGY-------------------N 192 (547)
Q Consensus 133 ~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~-L~~L~ls~N~~~~~-------------------n 192 (547)
. +++++ +|+.|+|++|+++ .+|..+.++++ |+.|+|++|.++.+ |
T Consensus 590 -~-~~~L~------------~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~~lp~~~~~~~~~~L~~L~Ls~N 654 (876)
T 4ecn_A 590 -A-FGTNV------------KLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLKYIPNIFNAKSVYVMGSVDFSYN 654 (876)
T ss_dssp -C-CCTTS------------EESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCCSCCSCCCTTCSSCEEEEECCSS
T ss_pred -h-hcCCC------------cceEEECcCCccc-cchHHHhhccccCCEEECcCCCCCcCchhhhccccCCCCEEECcCC
Confidence 3 55555 5666666666666 55555666666 66666666655310 1
Q ss_pred ccCCCCCcc---hh--cCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCCccccccCCCCcc--------CCcchhc
Q 047800 193 KLQGSIPES---FG--DLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKLEGEILRGGSF--------GNFLVEL 259 (547)
Q Consensus 193 ~l~~~~p~~---~~--~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~--------~~l~~l~ 259 (547)
.+.+.+|.. +. .+++|+.|+|++|+++..++..+..+++|+.|+|++|+++..+...... .++..++
T Consensus 655 ~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~ 734 (876)
T 4ecn_A 655 KIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTID 734 (876)
T ss_dssp CTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEE
T ss_pred cCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccccCCccEEE
Confidence 113333321 11 2235555666666655333233345566666666666666333222111 1555666
Q ss_pred ccCcccc
Q 047800 260 FEGNKLL 266 (547)
Q Consensus 260 l~~N~~~ 266 (547)
+.+|.+.
T Consensus 735 Ls~N~L~ 741 (876)
T 4ecn_A 735 LRFNKLT 741 (876)
T ss_dssp CCSSCCC
T ss_pred CCCCCCc
Confidence 6666554
No 298
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.95 E-value=3.1e-27 Score=260.99 Aligned_cols=246 Identities=23% Similarity=0.210 Sum_probs=156.3
Q ss_pred CCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCCCC
Q 047800 10 HNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRNLN 89 (547)
Q Consensus 10 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 89 (547)
++|++|+|++|+|+++.+..|.++++|++|+|++|.++ +..|..|.++++|++|+|++|+|+++.+.+|+++++|+
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~----~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~ 100 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTIS----KLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLT 100 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCC----CCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCS
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccC----ccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCC
Confidence 45556666666655555555555566666666655555 34455555555555555555555554444555555555
Q ss_pred eeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCc------------chhhh--ccccCCccc
Q 047800 90 ELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSH------------SLEFF--VMSYCNDIL 155 (547)
Q Consensus 90 ~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~------------~~~~~--~~~~~~~L~ 155 (547)
+|+|++|+++++++. .|.++++|++|+|++|+++++.+.. +.+++. .+... .+..+++|+
T Consensus 101 ~L~L~~n~l~~~~~~-----~~~~l~~L~~L~Ls~n~l~~~~~~~-~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~ 174 (680)
T 1ziw_A 101 ELHLMSNSIQKIKNN-----PFVKQKNLITLDLSHNGLSSTKLGT-QVQLENLQELLLSNNKIQALKSEELDIFANSSLK 174 (680)
T ss_dssp EEECCSSCCCCCCSC-----TTTTCTTCCEEECCSSCCSCCCCCS-SSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEES
T ss_pred EEECCCCccCccChh-----HccccCCCCEEECCCCcccccCchh-hcccccCCEEEccCCcccccCHHHhhcccccccc
Confidence 555555555555544 4555555555555555555554443 222220 00000 112345788
Q ss_pred EEEccCCcCCCCCCcCCCCCcccccccccccccc---------------------CccccCCCCCcchhcCCC--CCEEE
Q 047800 156 YLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFS---------------------GYNKLQGSIPESFGDLSN--NNTLN 212 (547)
Q Consensus 156 ~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~~---------------------~~n~l~~~~p~~~~~l~~--L~~L~ 212 (547)
.|++++|.+++..|..|..+.+|+.|++++|.+. ..|.+++..|..|..++. |+.|+
T Consensus 175 ~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~ 254 (680)
T 1ziw_A 175 KLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLD 254 (680)
T ss_dssp EEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEE
T ss_pred EEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEE
Confidence 8888888888877777776665555554444321 113446777888888755 99999
Q ss_pred CcCCcCCCCCCcchhCCCCCCeEeCCCCccccccCCC-CccCCcchhcccCccc
Q 047800 213 LSNNNLSGAIPISLEKLSYLDDLDLSFNKLEGEILRG-GSFGNFLVELFEGNKL 265 (547)
Q Consensus 213 l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~ 265 (547)
|++|++++..|.+|..+++|+.|++++|++++..+.. ..+.+++.+++.+|..
T Consensus 255 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~ 308 (680)
T 1ziw_A 255 LSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFT 308 (680)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBC
T ss_pred CCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhh
Confidence 9999999888889999999999999999999877765 6788888888887643
No 299
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.95 E-value=1e-26 Score=229.22 Aligned_cols=206 Identities=22% Similarity=0.167 Sum_probs=185.3
Q ss_pred hhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCeeeccccccccccCchhhH
Q 047800 29 TIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRNLNELALHNNYLTSSTLELSFL 108 (547)
Q Consensus 29 ~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~ 108 (547)
.++++++|+++++++|.|+ .+|..+. ++++.|+|++|+|+++.|..|.++++|++|+|++|.|+++++
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-----~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~----- 72 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-----ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV----- 72 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-----SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC-----
T ss_pred cccccCCccEEECCCCCCC-----cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC-----
Confidence 4788999999999999999 8887765 689999999999999989999999999999999999998764
Q ss_pred hhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCCCCCCcCCCCCccccccccccccc
Q 047800 109 SLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNF 188 (547)
Q Consensus 109 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~ 188 (547)
...+++|++|+|++|+|+.++. . +..++ +|++|++++|+|++..|..|.++++|+.|+|++|.+
T Consensus 73 --~~~l~~L~~L~Ls~N~l~~l~~-~-~~~l~------------~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l 136 (290)
T 1p9a_G 73 --DGTLPVLGTLDLSHNQLQSLPL-L-GQTLP------------ALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNEL 136 (290)
T ss_dssp --CSCCTTCCEEECCSSCCSSCCC-C-TTTCT------------TCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCC
T ss_pred --CCCCCcCCEEECCCCcCCcCch-h-hccCC------------CCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCC
Confidence 3678999999999999997754 2 44555 999999999999988889999999999999999999
Q ss_pred cCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCCccccccCCCCccCCcchhcccCcccccc
Q 047800 189 SGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKLEGEILRGGSFGNFLVELFEGNKLLYG 268 (547)
Q Consensus 189 ~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~c~ 268 (547)
++..++.|..+++|+.|+|++|+|++..+..|..+++|+.|++++|+++..+........+..+++.+|++.|.
T Consensus 137 ------~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 137 ------KTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp ------CCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred ------CccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCc
Confidence 55677789999999999999999998888889999999999999999997766667777899999999999885
No 300
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.95 E-value=4.4e-27 Score=230.26 Aligned_cols=224 Identities=20% Similarity=0.209 Sum_probs=193.9
Q ss_pred cEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCeee
Q 047800 13 EYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRNLNELA 92 (547)
Q Consensus 13 ~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 92 (547)
...+.++.+++ .+|..+. ++|++|+|++|+|+ +..+..|.++++|++|+|++|+|+++.+..|.++++|++|+
T Consensus 10 ~~~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~----~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 82 (276)
T 2z62_A 10 ITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLR----HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLI 82 (276)
T ss_dssp TEEECTTSCCS-SCCSSSC--TTCCEEECTTCCCC----EECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred ceEEecCCCcc-ccCCCCC--CCccEEECCCCccc----ccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEE
Confidence 45778888887 4555553 58999999999999 34445888999999999999999998888999999999999
Q ss_pred ccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCCCC-CCcC
Q 047800 93 LHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGP-LPLE 171 (547)
Q Consensus 93 L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~~-~p~~ 171 (547)
|++|+|+++++. .|.++++|++|++++|+++++.+.. +.+++ +|++|++++|.+++. +|..
T Consensus 83 L~~n~l~~~~~~-----~~~~l~~L~~L~l~~n~l~~~~~~~-~~~l~------------~L~~L~l~~n~l~~~~l~~~ 144 (276)
T 2z62_A 83 LTGNPIQSLALG-----AFSGLSSLQKLVAVETNLASLENFP-IGHLK------------TLKELNVAHNLIQSFKLPEY 144 (276)
T ss_dssp CTTCCCCEECTT-----TTTTCTTCCEEECTTSCCCCSTTCC-CTTCT------------TCCEEECCSSCCCCCCCCGG
T ss_pred CCCCccCccChh-----hhcCCccccEEECCCCCccccCchh-cccCC------------CCCEEECcCCccceecCchh
Confidence 999999999887 8999999999999999999887765 55555 999999999999864 5899
Q ss_pred CCCCccccccccccccccCccccCCCCCcchhcCCCCC----EEECcCCcCCCCCCcchhCCCCCCeEeCCCCccccccC
Q 047800 172 IGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNN----TLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKLEGEIL 247 (547)
Q Consensus 172 ~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~----~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 247 (547)
|.++++|+.|++++|.+ ++..+..|..+++|+ .|++++|++++..+..+.. .+|+.|++++|++++.++
T Consensus 145 ~~~l~~L~~L~Ls~N~l------~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~ 217 (276)
T 2z62_A 145 FSNLTNLEHLDLSSNKI------QSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPD 217 (276)
T ss_dssp GGGCTTCCEEECCSSCC------CEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCT
T ss_pred hccCCCCCEEECCCCCC------CcCCHHHhhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCH
Confidence 99999999999999998 456667888888777 8999999999777766654 489999999999998776
Q ss_pred CC-CccCCcchhcccCcccccc
Q 047800 248 RG-GSFGNFLVELFEGNKLLYG 268 (547)
Q Consensus 248 ~~-~~~~~l~~l~l~~N~~~c~ 268 (547)
.. ..+.+++.+++.+|++.|.
T Consensus 218 ~~~~~l~~L~~L~l~~N~~~c~ 239 (276)
T 2z62_A 218 GIFDRLTSLQKIWLHTNPWDCS 239 (276)
T ss_dssp TTTTTCCSCCEEECCSSCBCCC
T ss_pred hHhcccccccEEEccCCccccc
Confidence 65 6688999999999999885
No 301
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.95 E-value=1.5e-27 Score=255.14 Aligned_cols=107 Identities=22% Similarity=0.250 Sum_probs=55.6
Q ss_pred CCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCCCC
Q 047800 10 HNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRNLN 89 (547)
Q Consensus 10 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 89 (547)
++|++|+|++|+|+++.|..|.++++|++|+|++|+|+ +..|..|.++++|++|+|++|+|+. +|.. .+++|+
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~----~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~--~l~~L~ 93 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQ----YLDISVFKFNQELEYLDLSHNKLVK-ISCH--PTVNLK 93 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCC----EEEGGGGTTCTTCCEEECCSSCCCE-EECC--CCCCCS
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccC----CcChHHhhcccCCCEEecCCCceee-cCcc--ccCCcc
Confidence 45555555555555555555555555555555555555 3334555555555555555555554 2322 455555
Q ss_pred eeecccccccccc-CchhhHhhhcCCCCCcEEeCcCCCCC
Q 047800 90 ELALHNNYLTSST-LELSFLSLLLNCKSLTHIGLSNNPLD 128 (547)
Q Consensus 90 ~L~L~~N~i~~~~-~~~~~~~~~~~l~~L~~L~Ls~N~l~ 128 (547)
+|+|++|+|++++ +. .|.++++|++|+|++|+|+
T Consensus 94 ~L~L~~N~l~~~~~p~-----~~~~l~~L~~L~L~~n~l~ 128 (520)
T 2z7x_B 94 HLDLSFNAFDALPICK-----EFGNMSQLKFLGLSTTHLE 128 (520)
T ss_dssp EEECCSSCCSSCCCCG-----GGGGCTTCCEEEEEESSCC
T ss_pred EEeccCCccccccchh-----hhccCCcceEEEecCcccc
Confidence 5555555555432 22 4445555555555555443
No 302
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.94 E-value=8.6e-27 Score=251.59 Aligned_cols=88 Identities=25% Similarity=0.304 Sum_probs=58.3
Q ss_pred CCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCC--CcchhCCCCCCeEeCCCCccccccC-CC
Q 047800 173 GNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAI--PISLEKLSYLDDLDLSFNKLEGEIL-RG 249 (547)
Q Consensus 173 ~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~--~~~~~~l~~L~~l~l~~N~l~~~~~-~~ 249 (547)
..+++|+.|++++|.+ ++..|..|..+++|+.|+|++|++++.. |..|..+++|+.|++++|++++..+ +.
T Consensus 350 ~~l~~L~~L~l~~n~l------~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 423 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVF------TDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRT 423 (562)
T ss_dssp SSCCCCCEEECCSSCC------CTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCC
T ss_pred cCCCCceEEECCCCcc------ccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhh
Confidence 4555666666666665 4566777777777777777777777533 3457777777777777777776333 22
Q ss_pred -CccCCcchhcccCcccc
Q 047800 250 -GSFGNFLVELFEGNKLL 266 (547)
Q Consensus 250 -~~~~~l~~l~l~~N~~~ 266 (547)
..+.+++.+++.+|.+.
T Consensus 424 ~~~l~~L~~L~l~~n~l~ 441 (562)
T 3a79_B 424 CAWAESILVLNLSSNMLT 441 (562)
T ss_dssp CCCCTTCCEEECCSSCCC
T ss_pred hcCcccCCEEECCCCCCC
Confidence 44567777777777664
No 303
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.94 E-value=4e-27 Score=254.46 Aligned_cols=238 Identities=20% Similarity=0.233 Sum_probs=185.3
Q ss_pred CCcccCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccc--------------------cCC
Q 047800 2 IPPEIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFI--------------------FNS 61 (547)
Q Consensus 2 ip~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~--------------------~~l 61 (547)
+|..|+.+++|+.|++++|.++ .+|..+..+ +|++|++++|.++ .+|... ..+
T Consensus 274 ~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-----~l~~~~l~~L~~L~l~~n~~~~~~~~~~~ 346 (570)
T 2z63_A 274 IIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-----QFPTLKLKSLKRLTFTSNKGGNAFSEVDL 346 (570)
T ss_dssp STTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-----SCCBCBCSSCCEEEEESCBSCCBCCCCBC
T ss_pred chhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-----ccCcccccccCEEeCcCCccccccccccC
Confidence 4566777888888888888887 466777777 7777777777776 444321 345
Q ss_pred CCCcEEEccCCcccccC--CccccCCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCccccccc
Q 047800 62 SKLSILSLAKNSFSSFI--PNTFGNLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNL 139 (547)
Q Consensus 62 ~~L~~L~Ls~N~l~~~~--~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l 139 (547)
++|++|+|++|++++.. |..+.++++|++|++++|.++++++ .|.++++|++|++++|++++..+...+.+
T Consensus 347 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~------~~~~l~~L~~L~l~~n~l~~~~~~~~~~~- 419 (570)
T 2z63_A 347 PSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSS------NFLGLEQLEHLDFQHSNLKQMSEFSVFLS- 419 (570)
T ss_dssp TTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEE------EEETCTTCCEEECTTSEEESCTTSCTTTT-
T ss_pred CCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccc------cccccCCCCEEEccCCccccccchhhhhc-
Confidence 66666666666666543 5566666677777777776666554 25666677777777777666544322334
Q ss_pred CcchhhhccccCCcccEEEccCCcCCCCCCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCC
Q 047800 140 SHSLEFFVMSYCNDILYLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLS 219 (547)
Q Consensus 140 ~~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~ 219 (547)
+++|++|++++|.+++..|..|.++++|+.|++++|.++ .+.+|..|..+++|++|+|++|+++
T Consensus 420 -----------l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-----~~~~p~~~~~l~~L~~L~l~~n~l~ 483 (570)
T 2z63_A 420 -----------LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQ-----ENFLPDIFTELRNLTFLDLSQCQLE 483 (570)
T ss_dssp -----------CTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEG-----GGEECSCCTTCTTCCEEECTTSCCC
T ss_pred -----------CCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCc-----cccchhhhhcccCCCEEECCCCccc
Confidence 449999999999999899999999999999999999984 3578999999999999999999999
Q ss_pred CCCCcchhCCCCCCeEeCCCCccccccCCC-CccCCcchhcccCccccccC
Q 047800 220 GAIPISLEKLSYLDDLDLSFNKLEGEILRG-GSFGNFLVELFEGNKLLYGS 269 (547)
Q Consensus 220 ~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~c~~ 269 (547)
+..|.+|..+++|+.|++++|++++.++.. ..+.++..+++.+|++.|..
T Consensus 484 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 534 (570)
T 2z63_A 484 QLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 534 (570)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred cCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCC
Confidence 998999999999999999999999887765 67889999999999998863
No 304
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.94 E-value=8.9e-27 Score=227.62 Aligned_cols=204 Identities=23% Similarity=0.256 Sum_probs=120.7
Q ss_pred CCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCC
Q 047800 7 GNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLR 86 (547)
Q Consensus 7 ~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 86 (547)
..+++|+.|++++|.++.. ..+..+++|++|+|++|+++ .+ +.+.++++|++|+|++|+|+++.+..|++++
T Consensus 38 ~~l~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~-----~~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 109 (272)
T 3rfs_A 38 NELNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLH-----DI-SALKELTNLTYLILTGNQLQSLPNGVFDKLT 109 (272)
T ss_dssp HHHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCC-----CC-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCT
T ss_pred ccccceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCC-----Cc-hhhcCCCCCCEEECCCCccCccChhHhcCCc
Confidence 3455666666666666532 23566666666666666665 22 2455666666666666666665555566666
Q ss_pred CCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCCC
Q 047800 87 NLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTG 166 (547)
Q Consensus 87 ~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~ 166 (547)
+|++|+|++|+++++++. .|.++++|++|+|++|+|+++++.. +.+++ +|++|++++|++++
T Consensus 110 ~L~~L~L~~n~l~~~~~~-----~~~~l~~L~~L~L~~n~l~~~~~~~-~~~l~------------~L~~L~l~~n~l~~ 171 (272)
T 3rfs_A 110 NLKELVLVENQLQSLPDG-----VFDKLTNLTYLNLAHNQLQSLPKGV-FDKLT------------NLTELDLSYNQLQS 171 (272)
T ss_dssp TCCEEECTTSCCCCCCTT-----TTTTCTTCCEEECCSSCCCCCCTTT-TTTCT------------TCCEEECCSSCCCC
T ss_pred CCCEEECCCCcCCccCHH-----HhccCCCCCEEECCCCccCccCHHH-hccCc------------cCCEEECCCCCcCc
Confidence 666666666666666554 5566666666666666666555543 33333 66666666666665
Q ss_pred CCCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCCcccccc
Q 047800 167 PLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKLEGEI 246 (547)
Q Consensus 167 ~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~ 246 (547)
..+..|+++++|+.|++++|.+ ++..|+.|..+++|+.|+|++|.+.+. +++|+.|+++.|.++|.+
T Consensus 172 ~~~~~~~~l~~L~~L~L~~N~l------~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~i 238 (272)
T 3rfs_A 172 LPEGVFDKLTQLKDLRLYQNQL------KSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVV 238 (272)
T ss_dssp CCTTTTTTCTTCCEEECCSSCC------SCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGB
T ss_pred cCHHHhcCCccCCEEECCCCcC------CccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcc
Confidence 5555556666666666666665 345555566666666666666665533 234556666666666555
Q ss_pred CCC
Q 047800 247 LRG 249 (547)
Q Consensus 247 ~~~ 249 (547)
|..
T Consensus 239 p~~ 241 (272)
T 3rfs_A 239 RNS 241 (272)
T ss_dssp BCT
T ss_pred cCc
Confidence 543
No 305
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=1.3e-27 Score=252.73 Aligned_cols=277 Identities=18% Similarity=0.117 Sum_probs=213.9
Q ss_pred CcccCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccc
Q 047800 3 PPEIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTF 82 (547)
Q Consensus 3 p~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 82 (547)
|..|+++++|+.|+|++|.|++..| |..+++|++|+|++|.|+ .+|.. ++|++|+|++|.|+++.+..
T Consensus 51 ~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~-----~l~~~----~~L~~L~L~~N~l~~~~~~~- 118 (487)
T 3oja_A 51 AADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQ-----ELLVG----PSIETLHAANNNISRVSCSR- 118 (487)
T ss_dssp GGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEE-----EEEEC----TTCCEEECCSSCCCCEEECC-
T ss_pred HHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCC-----CCCCC----CCcCEEECcCCcCCCCCccc-
Confidence 5789999999999999999998766 999999999999999998 55532 89999999999999976654
Q ss_pred cCCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCC
Q 047800 83 GNLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSN 162 (547)
Q Consensus 83 ~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N 162 (547)
+++|++|+|++|.|+++++. .|.++++|++|+|++|+|+++.+..+...++ +|++|+|++|
T Consensus 119 --l~~L~~L~L~~N~l~~~~~~-----~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~------------~L~~L~Ls~N 179 (487)
T 3oja_A 119 --GQGKKNIYLANNKITMLRDL-----DEGCRSRVQYLDLKLNEIDTVNFAELAASSD------------TLEHLNLQYN 179 (487)
T ss_dssp --CSSCEEEECCSSCCCSGGGB-----CGGGGSSEEEEECTTSCCCEEEGGGGGGGTT------------TCCEEECTTS
T ss_pred --cCCCCEEECCCCCCCCCCch-----hhcCCCCCCEEECCCCCCCCcChHHHhhhCC------------cccEEecCCC
Confidence 58899999999999999887 7889999999999999999988777555666 9999999999
Q ss_pred cCCCCCCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCCcc
Q 047800 163 FLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKL 242 (547)
Q Consensus 163 ~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l 242 (547)
.|++..+ +..+++|+.|+|++|.++ .+|..|..+++|+.|+|++|.+++ +|..+..+++|+.|++++|++
T Consensus 180 ~l~~~~~--~~~l~~L~~L~Ls~N~l~-------~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l 249 (487)
T 3oja_A 180 FIYDVKG--QVVFAKLKTLDLSSNKLA-------FMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGF 249 (487)
T ss_dssp CCCEEEC--CCCCTTCCEEECCSSCCC-------EECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCB
T ss_pred ccccccc--cccCCCCCEEECCCCCCC-------CCCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCC
Confidence 9997633 446999999999999995 355569999999999999999995 677799999999999999999
Q ss_pred c-cccCCC-CccCCcchhccc-------CccccccCCCCCC---cccccccccc---eeec--------cchhhHHHHHH
Q 047800 243 E-GEILRG-GSFGNFLVELFE-------GNKLLYGSPCKTS---IHHASWKNAL---LLRT--------VLPLRTIFMIV 299 (547)
Q Consensus 243 ~-~~~~~~-~~~~~l~~l~l~-------~N~~~c~~~c~~~---~~~~~~~~~~---~~~~--------~~~~~~~~~~~ 299 (547)
. +..+.. ..+..+..+.+. .|+..|..+.... ..+....... .+.+ ...+...|..|
T Consensus 250 ~c~~~~~~~~~l~~L~~l~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~eF~~E 329 (487)
T 3oja_A 250 HCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVPTLGHYGAYCCEDLPAPFADRLIALKRKEHALLSGQGSETERLE 329 (487)
T ss_dssp CHHHHHHHHTTCHHHHHHHHHHHHHHTSSSSCCCSSTTCEEETTEEECCCSCHHHHHHHHHHHHHHCSCC-----CHHHH
T ss_pred cCcchHHHHHhCCCCcEEeccccccccCCCcccccCCccccccccccccccchhhhHHHHHHHHhhhhcccccHHHHHHH
Confidence 8 333332 445566666665 6666665431110 0000000000 0000 00011126667
Q ss_pred HH-HHHHHHhhcCCCCCCCCCccccccccCcc
Q 047800 300 VI-LLILRCRKRGKRPSNDANISPVATSCSNE 330 (547)
Q Consensus 300 ~~-~~~~~~~~~~~~~~~H~nIv~l~~~~~~~ 330 (547)
+. +..++ |+|+|+++|||...
T Consensus 330 ve~L~~i~----------HrNLV~L~gyC~s~ 351 (487)
T 3oja_A 330 CERENQAR----------QREIDALKEQYRTV 351 (487)
T ss_dssp HHHHHHHH----------HHHHHHHHHHTCCC
T ss_pred HHHHhccc----------ccchhhHHHHhcCh
Confidence 76 77777 99999999999875
No 306
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.94 E-value=6.1e-28 Score=243.37 Aligned_cols=188 Identities=11% Similarity=0.059 Sum_probs=139.6
Q ss_pred CCCccccccccCc-------------cceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCc
Q 047800 317 DANISPVATSCSN-------------EEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPV 383 (547)
Q Consensus 317 H~nIv~l~~~~~~-------------~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i 383 (547)
||||+++++++.+ ....++||||+++|++.+.+.+. .+++.+++.++.|++.||+|||. +++|
T Consensus 108 hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~--~~~~~~~~~i~~qi~~aL~~lH~--~~~i 183 (336)
T 2vuw_A 108 PPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTK--LSSLATAKSILHQLTASLAVAEA--SLRF 183 (336)
T ss_dssp CHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTT--CCCHHHHHHHHHHHHHHHHHHHH--HHCC
T ss_pred cHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHH--hCCE
Confidence 5666666666654 67899999999999877766543 58999999999999999999993 3789
Q ss_pred cccCCCCCcEEeCCCC--------------------cEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcch
Q 047800 384 IHCDIKANNVLLDDNM--------------------VAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG 443 (547)
Q Consensus 384 ~H~dlkp~Nill~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~s 443 (547)
+||||||+|||++.++ .+||+|||+|+..... ...||+.|+|||++.+.. +.++
T Consensus 184 vHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-----~~~gt~~y~aPE~~~g~~-~~~~ 257 (336)
T 2vuw_A 184 EHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-----IVVFCDVSMDEDLFTGDG-DYQF 257 (336)
T ss_dssp BCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-----EEECCCCTTCSGGGCCCS-SHHH
T ss_pred eECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-----cEEEeecccChhhhcCCC-ccce
Confidence 9999999999999887 8999999999865432 347999999999998766 8899
Q ss_pred hHHHHHHH-HHHHHhCCCCCchhhhhhhhhhhhhhhccCchhhhhhhhhhccchhhhhhcHHHHHHHHHHHHhhhcCcCC
Q 047800 444 DVYSFGIM-LMKTFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESP 522 (547)
Q Consensus 444 Dv~s~G~i-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 522 (547)
||||+|++ .+++++|..||............ +.... .............+++++.+++.+||+.|
T Consensus 258 Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~------------~~~~~-~~~~~~~~~~~~~~s~~~~dli~~~L~~d- 323 (336)
T 2vuw_A 258 DIYRLMKKENNNRWGEYHPYSNVLWLHYLTDK------------MLKQM-TFKTKCNTPAMKQIKRKIQEFHRTMLNFS- 323 (336)
T ss_dssp HHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHH------------HHHTC-CCSSCCCSHHHHHHHHHHHHHHHHGGGSS-
T ss_pred ehhhhhCCCCcccccccCCCcchhhhhHHHHh------------hhhhh-ccCcccchhhhhhcCHHHHHHHHHHhccC-
Confidence 99998777 77788999998542110100000 00000 00001111123556788999999999976
Q ss_pred CCCCChHHHH
Q 047800 523 EQRINPKEIV 532 (547)
Q Consensus 523 ~~Rps~~eil 532 (547)
|++|++
T Consensus 324 ----sa~e~l 329 (336)
T 2vuw_A 324 ----SATDLL 329 (336)
T ss_dssp ----SHHHHH
T ss_pred ----CHHHHH
Confidence 898887
No 307
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.94 E-value=3.1e-27 Score=254.31 Aligned_cols=69 Identities=23% Similarity=0.147 Sum_probs=45.7
Q ss_pred CCcch-hcCCCCCEEECcCCcCCCCCC---cchhCCCCCCeEeCCCCccccccCC---CCccCCcchhcccCcccc
Q 047800 198 IPESF-GDLSNNNTLNLSNNNLSGAIP---ISLEKLSYLDDLDLSFNKLEGEILR---GGSFGNFLVELFEGNKLL 266 (547)
Q Consensus 198 ~p~~~-~~l~~L~~L~l~~N~l~~~~~---~~~~~l~~L~~l~l~~N~l~~~~~~---~~~~~~l~~l~l~~N~~~ 266 (547)
+|..+ ..+++|++|+|++|++++..| ..+..+++|+.|++++|++++..+. ...+.+++.+++.+|.+.
T Consensus 325 ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~ 400 (549)
T 2z81_A 325 VPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH 400 (549)
T ss_dssp CCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC
T ss_pred CCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc
Confidence 44443 467788888888888776553 2366777777888887777654321 245667777777777665
No 308
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.94 E-value=1.3e-26 Score=221.93 Aligned_cols=195 Identities=17% Similarity=0.192 Sum_probs=103.7
Q ss_pred CCcEEEccCCccccCCChhhcCCCCCCEEEccccc-CCCCCCCCCC-ccccCCCCCcEEEccC-CcccccCCccccCCCC
Q 047800 11 NLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNS-LSGSLSGTIP-RFIFNSSKLSILSLAK-NSFSSFIPNTFGNLRN 87 (547)
Q Consensus 11 ~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~p-~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~ 87 (547)
+|+.|+|++|+|+++.+..|.++++|++|+|++|+ ++ .+| ..|.++++|++|+|++ |+|+++.+..|.++++
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~-----~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~ 106 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQ-----QLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPL 106 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCC-----EECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTT
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcc-----eeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCC
Confidence 55666666666665555556666666666666664 55 333 2455556666666665 5666555555556666
Q ss_pred CCeeeccccccccccCchhhHhhhcCCCCCc---EEeCcCC-CCCCCCCcccccccCcchhhhccccCCccc-EEEccCC
Q 047800 88 LNELALHNNYLTSSTLELSFLSLLLNCKSLT---HIGLSNN-PLDGILHRTYMGNLSHSLEFFVMSYCNDIL-YLDLSSN 162 (547)
Q Consensus 88 L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~---~L~Ls~N-~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~-~L~ls~N 162 (547)
|++|+|++|++++++ .|..+.+|+ +|++++| +++++++.. +.+++ +|+ .|++++|
T Consensus 107 L~~L~l~~n~l~~lp-------~~~~l~~L~~L~~L~l~~N~~l~~i~~~~-~~~l~------------~L~~~L~l~~n 166 (239)
T 2xwt_C 107 LKFLGIFNTGLKMFP-------DLTKVYSTDIFFILEITDNPYMTSIPVNA-FQGLC------------NETLTLKLYNN 166 (239)
T ss_dssp CCEEEEEEECCCSCC-------CCTTCCBCCSEEEEEEESCTTCCEECTTT-TTTTB------------SSEEEEECCSC
T ss_pred CCEEeCCCCCCcccc-------ccccccccccccEEECCCCcchhhcCccc-ccchh------------cceeEEEcCCC
Confidence 666666666655543 134444444 6666666 555554443 23333 555 6666666
Q ss_pred cCCCCCCcCCCCCcccccccccccc-ccCccccCCCCCcchhcC-CCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCC
Q 047800 163 FLTGPLPLEIGNLKGLVGVDFSMNN-FSGYNKLQGSIPESFGDL-SNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFN 240 (547)
Q Consensus 163 ~l~~~~p~~~~~l~~L~~L~ls~N~-~~~~n~l~~~~p~~~~~l-~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N 240 (547)
+++.+.+..|.. ++|+.|++++|+ + ++..++.|..+ ++|+.|++++|++++..+. .+++|+.|+++++
T Consensus 167 ~l~~i~~~~~~~-~~L~~L~L~~n~~l------~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 167 GFTSVQGYAFNG-TKLDAVYLNKNKYL------TVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp CCCEECTTTTTT-CEEEEEECTTCTTC------CEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CCcccCHhhcCC-CCCCEEEcCCCCCc------ccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 555333333333 555556665553 4 23334455555 5555566655555533322 3445555555544
No 309
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=1.3e-27 Score=238.88 Aligned_cols=222 Identities=20% Similarity=0.181 Sum_probs=189.2
Q ss_pred CcccCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccc
Q 047800 3 PPEIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTF 82 (547)
Q Consensus 3 p~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 82 (547)
|..|+++++|+.|+|++|+|++..+ |..+++|++|+|++|+|+ .+|. .++|++|++++|+|+++.+..
T Consensus 51 ~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~-----~l~~----~~~L~~L~l~~n~l~~~~~~~- 118 (317)
T 3o53_A 51 AADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQ-----ELLV----GPSIETLHAANNNISRVSCSR- 118 (317)
T ss_dssp HHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEE-----EEEE----CTTCCEEECCSSCCSEEEECC-
T ss_pred HHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccc-----cccC----CCCcCEEECCCCccCCcCccc-
Confidence 4678999999999999999997665 999999999999999998 5543 389999999999999976554
Q ss_pred cCCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCC
Q 047800 83 GNLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSN 162 (547)
Q Consensus 83 ~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N 162 (547)
+++|++|+|++|+|+++++. .|..+++|++|+|++|+|+++.+..+...++ +|++|+|++|
T Consensus 119 --~~~L~~L~l~~N~l~~~~~~-----~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~------------~L~~L~L~~N 179 (317)
T 3o53_A 119 --GQGKKNIYLANNKITMLRDL-----DEGCRSRVQYLDLKLNEIDTVNFAELAASSD------------TLEHLNLQYN 179 (317)
T ss_dssp --CSSCEEEECCSSCCCSGGGB-----CTGGGSSEEEEECTTSCCCEEEGGGGGGGTT------------TCCEEECTTS
T ss_pred --cCCCCEEECCCCCCCCccch-----hhhccCCCCEEECCCCCCCcccHHHHhhccC------------cCCEEECCCC
Confidence 67899999999999999887 7889999999999999999987776555566 9999999999
Q ss_pred cCCCCCCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCCcc
Q 047800 163 FLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKL 242 (547)
Q Consensus 163 ~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l 242 (547)
.|++. + ....+++|+.|++++|.++ .+|..|..+++|+.|+|++|+++ .+|..+..+++|+.|++++|++
T Consensus 180 ~l~~~-~-~~~~l~~L~~L~Ls~N~l~-------~l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~ 249 (317)
T 3o53_A 180 FIYDV-K-GQVVFAKLKTLDLSSNKLA-------FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGF 249 (317)
T ss_dssp CCCEE-E-CCCCCTTCCEEECCSSCCC-------EECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCC
T ss_pred cCccc-c-cccccccCCEEECCCCcCC-------cchhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCc
Confidence 99965 3 3345899999999999995 45666999999999999999999 4677899999999999999999
Q ss_pred c-cccCCC-CccCCcchhcccCccc
Q 047800 243 E-GEILRG-GSFGNFLVELFEGNKL 265 (547)
Q Consensus 243 ~-~~~~~~-~~~~~l~~l~l~~N~~ 265 (547)
. +..+.. ..+..+..+++.+++.
T Consensus 250 ~~~~~~~~~~~~~~L~~l~l~~~~~ 274 (317)
T 3o53_A 250 HCGTLRDFFSKNQRVQTVAKQTVKK 274 (317)
T ss_dssp BHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cCcCHHHHHhccccceEEECCCchh
Confidence 9 433333 5567778888875543
No 310
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.94 E-value=2.1e-26 Score=250.78 Aligned_cols=235 Identities=19% Similarity=0.188 Sum_probs=124.7
Q ss_pred ccCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccC
Q 047800 5 EIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGN 84 (547)
Q Consensus 5 ~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 84 (547)
+|+++++|++|+|++|+|+++.|..|.++++|++|+|++|+|+ +..|..|.++++|++|+|++|+|+++.+..|++
T Consensus 51 ~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~----~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 126 (606)
T 3vq2_A 51 SFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQ----SFSPGSFSGLTSLENLVAVETKLASLESFPIGQ 126 (606)
T ss_dssp TTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC----CCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTT
T ss_pred hccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCccc----ccChhhcCCcccCCEEEccCCccccccccccCC
Confidence 4444455555555555554444444555555555555555444 233444444555555555555554444444455
Q ss_pred CCCCCeeecccccccccc-CchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCC-cccEEEccCC
Q 047800 85 LRNLNELALHNNYLTSST-LELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCN-DILYLDLSSN 162 (547)
Q Consensus 85 l~~L~~L~L~~N~i~~~~-~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~-~L~~L~ls~N 162 (547)
+++|++|+|++|.+++.. +. .|.++++|++|+|++|+++++.+.. +..+. .+. .+.+|++++|
T Consensus 127 l~~L~~L~L~~n~l~~~~lp~-----~~~~l~~L~~L~Ls~n~l~~~~~~~-~~~l~---------~L~~~l~~L~l~~n 191 (606)
T 3vq2_A 127 LITLKKLNVAHNFIHSCKLPA-----YFSNLTNLVHVDLSYNYIQTITVND-LQFLR---------ENPQVNLSLDMSLN 191 (606)
T ss_dssp CTTCCEEECCSSCCCCCCCCG-----GGGTCTTCCEEECCSSCCCEECTTT-THHHH---------HCTTCCCEEECTTC
T ss_pred CCCCCEEeCCCCcccceechH-----hHhhcCCCCEEEccCCcceecChhh-hhhhh---------ccccccceeeccCC
Confidence 555555555555544322 22 3444555555555555554444333 11111 000 1235666666
Q ss_pred cCCCCCCcCCCCCcccccccccccccc----------------------------------------------------C
Q 047800 163 FLTGPLPLEIGNLKGLVGVDFSMNNFS----------------------------------------------------G 190 (547)
Q Consensus 163 ~l~~~~p~~~~~l~~L~~L~ls~N~~~----------------------------------------------------~ 190 (547)
.+++..+..+... +|+.|++++|.++ .
T Consensus 192 ~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 270 (606)
T 3vq2_A 192 PIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTY 270 (606)
T ss_dssp CCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECC
T ss_pred CcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccc
Confidence 6665444444433 6777777777653 2
Q ss_pred ccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCCccccccCCCCccCCcchhcccCcc
Q 047800 191 YNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKLEGEILRGGSFGNFLVELFEGNK 264 (547)
Q Consensus 191 ~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~l~l~~N~ 264 (547)
.|.+.+.+|+ |..+++|+.|++++|.++. +| .+..+++|+.|++++|.+. ..|.. .+.+++.+++.+|.
T Consensus 271 ~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~-l~-~l~~~~~L~~L~l~~n~l~-~lp~~-~l~~L~~L~l~~n~ 339 (606)
T 3vq2_A 271 TNDFSDDIVK-FHCLANVSAMSLAGVSIKY-LE-DVPKHFKWQSLSIIRCQLK-QFPTL-DLPFLKSLTLTMNK 339 (606)
T ss_dssp CTTCCGGGGS-CGGGTTCSEEEEESCCCCC-CC-CCCTTCCCSEEEEESCCCS-SCCCC-CCSSCCEEEEESCS
T ss_pred cccccccccc-cccCCCCCEEEecCccchh-hh-hccccccCCEEEcccccCc-ccccC-CCCccceeeccCCc
Confidence 3444555555 6777777777777777763 44 6777777777777777773 44433 56666666666663
No 311
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.94 E-value=2.1e-26 Score=246.15 Aligned_cols=147 Identities=20% Similarity=0.230 Sum_probs=109.3
Q ss_pred cCCCCCcEEeCcCCCCCCCCCcccccccCc------------chhh--hccccCCcccEEEccCCcCCCCCCc-CCCCCc
Q 047800 112 LNCKSLTHIGLSNNPLDGILHRTYMGNLSH------------SLEF--FVMSYCNDILYLDLSSNFLTGPLPL-EIGNLK 176 (547)
Q Consensus 112 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~------------~~~~--~~~~~~~~L~~L~ls~N~l~~~~p~-~~~~l~ 176 (547)
..+++|++|++++|++++..+.. +.+++. .+.. ..++.+++|++|++++|.+++.+|. .+..++
T Consensus 321 ~~l~~L~~L~Ls~n~l~~~~~~~-~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~ 399 (520)
T 2z7x_B 321 SKISPFLHLDFSNNLLTDTVFEN-CGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTK 399 (520)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTT-CCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCT
T ss_pred hhCCcccEEEeECCccChhhhhh-hccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCc
Confidence 56777888888888887755544 233320 1111 2356677888888888888874444 477888
Q ss_pred cccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCCccccccCC-CCccCCc
Q 047800 177 GLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKLEGEILR-GGSFGNF 255 (547)
Q Consensus 177 ~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~~~~l 255 (547)
+|+.|++++|.+ ++..|..+. ++|+.|+|++|+++ .+|..+..+++|+.|++++|++++.+.. ...+.++
T Consensus 400 ~L~~L~Ls~N~l------~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L 470 (520)
T 2z7x_B 400 SLLSLNMSSNIL------TDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSL 470 (520)
T ss_dssp TCCEEECCSSCC------CGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred cCCEEECcCCCC------Ccchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcc
Confidence 888888888887 455555553 68999999999998 6777777999999999999999976555 3667889
Q ss_pred chhcccCcccccc
Q 047800 256 LVELFEGNKLLYG 268 (547)
Q Consensus 256 ~~l~l~~N~~~c~ 268 (547)
..+++.+|++.|.
T Consensus 471 ~~L~l~~N~~~c~ 483 (520)
T 2z7x_B 471 QKIWLHTNPWDCS 483 (520)
T ss_dssp CEEECCSSCBCCC
T ss_pred cEEECcCCCCccc
Confidence 9999999999874
No 312
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.94 E-value=5.1e-26 Score=248.64 Aligned_cols=110 Identities=23% Similarity=0.272 Sum_probs=95.0
Q ss_pred cccEEEccCCcC-CCCCCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCC
Q 047800 153 DILYLDLSSNFL-TGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSY 231 (547)
Q Consensus 153 ~L~~L~ls~N~l-~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 231 (547)
+|+.|+|++|.+ .+.+|..|..+++|+.|+|++|.+ ++..|++|.++++|++|+|++|+|++..|..|..+++
T Consensus 470 ~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L------~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~ 543 (635)
T 4g8a_A 470 SLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQL------EQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNS 543 (635)
T ss_dssp TCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCC------CEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTT
T ss_pred hhhhhhhhhcccccccCchhhhhccccCEEECCCCcc------CCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCC
Confidence 455566666653 335677889999999999999998 6788999999999999999999999999999999999
Q ss_pred CCeEeCCCCccccccCCC-Ccc-CCcchhcccCcccccc
Q 047800 232 LDDLDLSFNKLEGEILRG-GSF-GNFLVELFEGNKLLYG 268 (547)
Q Consensus 232 L~~l~l~~N~l~~~~~~~-~~~-~~l~~l~l~~N~~~c~ 268 (547)
|+.||+++|+|++..+.. ..+ .+++.+++.+||+.|.
T Consensus 544 L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 544 LQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp CCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred CCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 999999999999988876 445 5799999999999985
No 313
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.94 E-value=1.7e-26 Score=225.68 Aligned_cols=222 Identities=19% Similarity=0.182 Sum_probs=191.4
Q ss_pred CCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCCC
Q 047800 9 LHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRNL 88 (547)
Q Consensus 9 l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 88 (547)
+.++..++++.+.+... ..+..+++|+.|++++|.++ .++ .+..+++|++|+|++|+|+++ ..+..+++|
T Consensus 18 ~~~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~-----~~~-~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L 87 (272)
T 3rfs_A 18 FAETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIK-----SVQ-GIQYLPNVRYLALGGNKLHDI--SALKELTNL 87 (272)
T ss_dssp HHHHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCC-----CCT-TGGGCTTCCEEECTTSCCCCC--GGGTTCTTC
T ss_pred HHHHHHHHhcCcccccc--cccccccceeeeeeCCCCcc-----ccc-ccccCCCCcEEECCCCCCCCc--hhhcCCCCC
Confidence 34566677888887754 45778999999999999998 554 478899999999999999983 489999999
Q ss_pred CeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCCCCC
Q 047800 89 NELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGPL 168 (547)
Q Consensus 89 ~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~~~ 168 (547)
++|+|++|.|+++++. .|.++++|++|+|++|+++++++.. +.+++ +|++|++++|++++..
T Consensus 88 ~~L~L~~n~l~~~~~~-----~~~~l~~L~~L~L~~n~l~~~~~~~-~~~l~------------~L~~L~L~~n~l~~~~ 149 (272)
T 3rfs_A 88 TYLILTGNQLQSLPNG-----VFDKLTNLKELVLVENQLQSLPDGV-FDKLT------------NLTYLNLAHNQLQSLP 149 (272)
T ss_dssp CEEECTTSCCCCCCTT-----TTTTCTTCCEEECTTSCCCCCCTTT-TTTCT------------TCCEEECCSSCCCCCC
T ss_pred CEEECCCCccCccChh-----HhcCCcCCCEEECCCCcCCccCHHH-hccCC------------CCCEEECCCCccCccC
Confidence 9999999999999987 7899999999999999999888766 55555 9999999999999888
Q ss_pred CcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCCccccccCC
Q 047800 169 PLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKLEGEILR 248 (547)
Q Consensus 169 p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~ 248 (547)
+..|.++++|+.|++++|.+ ++..+..|..+++|+.|+|++|++++..|..+..+++|+.|++++|++.+.
T Consensus 150 ~~~~~~l~~L~~L~l~~n~l------~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~--- 220 (272)
T 3rfs_A 150 KGVFDKLTNLTELDLSYNQL------QSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT--- 220 (272)
T ss_dssp TTTTTTCTTCCEEECCSSCC------CCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC---
T ss_pred HHHhccCccCCEEECCCCCc------CccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc---
Confidence 88899999999999999998 567777889999999999999999999888899999999999999999864
Q ss_pred CCccCCcchhcccCccccccCC
Q 047800 249 GGSFGNFLVELFEGNKLLYGSP 270 (547)
Q Consensus 249 ~~~~~~l~~l~l~~N~~~c~~~ 270 (547)
+..+..+.+..|.+....|
T Consensus 221 ---~~~l~~l~~~~n~~~g~ip 239 (272)
T 3rfs_A 221 ---CPGIRYLSEWINKHSGVVR 239 (272)
T ss_dssp ---TTTTHHHHHHHHHTGGGBB
T ss_pred ---CcHHHHHHHHHHhCCCccc
Confidence 4456677777776654433
No 314
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.94 E-value=1.1e-25 Score=227.68 Aligned_cols=238 Identities=26% Similarity=0.350 Sum_probs=167.2
Q ss_pred CCcccCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCcc
Q 047800 2 IPPEIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNT 81 (547)
Q Consensus 2 ip~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 81 (547)
+|+ |.++++|++|+|++|.|+.+ ..|.++++|++|+|++|+++ .+|. +..+++|+.|++++|..... +..
T Consensus 81 ~~~-~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~~L~l~~n~i~-----~~~~-~~~l~~L~~L~l~~n~~~~~-~~~ 150 (347)
T 4fmz_A 81 ISP-LSNLVKLTNLYIGTNKITDI--SALQNLTNLRELYLNEDNIS-----DISP-LANLTKMYSLNLGANHNLSD-LSP 150 (347)
T ss_dssp CGG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCSEEECTTSCCC-----CCGG-GTTCTTCCEEECTTCTTCCC-CGG
T ss_pred chh-hhcCCcCCEEEccCCcccCc--hHHcCCCcCCEEECcCCccc-----Cchh-hccCCceeEEECCCCCCccc-ccc
Confidence 344 88899999999999999864 46999999999999999998 5555 77888889999988865553 344
Q ss_pred ccCCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccC------cch-hhhccccCCcc
Q 047800 82 FGNLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLS------HSL-EFFVMSYCNDI 154 (547)
Q Consensus 82 ~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~------~~~-~~~~~~~~~~L 154 (547)
+..+++|++|++++|.+++++ .+..+++|++|++++|+++++.+-.....+. ..+ ....++.+++|
T Consensus 151 ~~~l~~L~~L~l~~~~~~~~~-------~~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~L 223 (347)
T 4fmz_A 151 LSNMTGLNYLTVTESKVKDVT-------PIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANMTRL 223 (347)
T ss_dssp GTTCTTCCEEECCSSCCCCCG-------GGGGCTTCSEEECTTSCCCCCGGGGGCTTCCEEECCSSCCCCCGGGGGCTTC
T ss_pred hhhCCCCcEEEecCCCcCCch-------hhccCCCCCEEEccCCcccccccccCCCccceeecccCCCCCCchhhcCCcC
Confidence 888888888888888887765 3667788888888888887765411111111 000 01115667788
Q ss_pred cEEEccCCcCCCCCCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCe
Q 047800 155 LYLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDD 234 (547)
Q Consensus 155 ~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 234 (547)
+.|++++|.+++..+ +..+++|+.|++++|.+++ + +.+..+++|+.|++++|++++. ..+..+++|+.
T Consensus 224 ~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-------~-~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~ 291 (347)
T 4fmz_A 224 NSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISD-------I-NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNS 291 (347)
T ss_dssp CEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-------C-GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSE
T ss_pred CEEEccCCccCCCcc--hhcCCCCCEEECCCCccCC-------C-hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCE
Confidence 888888888875443 7778888888888887741 2 3566777777777777777654 34667777777
Q ss_pred EeCCCCccccccCCC-CccCCcchhcccCcccccc
Q 047800 235 LDLSFNKLEGEILRG-GSFGNFLVELFEGNKLLYG 268 (547)
Q Consensus 235 l~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~c~ 268 (547)
|++++|++++..+.. ..+.+++.+++.+|++..-
T Consensus 292 L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 326 (347)
T 4fmz_A 292 LFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDI 326 (347)
T ss_dssp EECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCC
T ss_pred EECcCCcCCCcChhHhhccccCCEEEccCCccccc
Confidence 777777776555443 4566677777777766443
No 315
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.93 E-value=1.8e-26 Score=248.39 Aligned_cols=164 Identities=18% Similarity=0.243 Sum_probs=134.7
Q ss_pred CCCcccCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCc
Q 047800 1 EIPPEIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPN 80 (547)
Q Consensus 1 ~ip~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 80 (547)
+||+.+. ++|++|+|++|+|+++.|..|.++++|++|+|++|+|+ +..|..|.++++|++|+|++|+|+++.|.
T Consensus 19 ~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~----~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 92 (549)
T 2z81_A 19 SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRIN----TIEGDAFYSLGSLEHLDLSDNHLSSLSSS 92 (549)
T ss_dssp SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCC----EECTTTTTTCTTCCEEECTTSCCCSCCHH
T ss_pred cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcC----ccChhhccccccCCEEECCCCccCccCHH
Confidence 3576554 78999999999999998999999999999999999999 56668899999999999999999998888
Q ss_pred cccCCCCCCeeecccccccccc-CchhhHhhhcCCCCCcEEeCcCCC-CCCCCCcccccccCcchhhhccccCCcccEEE
Q 047800 81 TFGNLRNLNELALHNNYLTSST-LELSFLSLLLNCKSLTHIGLSNNP-LDGILHRTYMGNLSHSLEFFVMSYCNDILYLD 158 (547)
Q Consensus 81 ~~~~l~~L~~L~L~~N~i~~~~-~~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ 158 (547)
.|+++++|++|+|++|++++++ +. .|.++++|++|++++|+ +..+++.. +.+++ +|++|+
T Consensus 93 ~~~~l~~L~~L~Ls~n~l~~~~~~~-----~~~~l~~L~~L~L~~n~~~~~~~~~~-~~~l~------------~L~~L~ 154 (549)
T 2z81_A 93 WFGPLSSLKYLNLMGNPYQTLGVTS-----LFPNLTNLQTLRIGNVETFSEIRRID-FAGLT------------SLNELE 154 (549)
T ss_dssp HHTTCTTCCEEECTTCCCSSSCSSC-----SCTTCTTCCEEEEEESSSCCEECTTT-TTTCC------------EEEEEE
T ss_pred HhccCCCCcEEECCCCcccccchhh-----hhhccCCccEEECCCCccccccCHhh-hhccc------------ccCeee
Confidence 8999999999999999998754 33 68899999999999998 55554444 44555 888888
Q ss_pred ccCCcCCCCCCcCCCCCccccccccccccc
Q 047800 159 LSSNFLTGPLPLEIGNLKGLVGVDFSMNNF 188 (547)
Q Consensus 159 ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~ 188 (547)
+++|.+++..|..++++++|+.|++++|.+
T Consensus 155 L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~ 184 (549)
T 2z81_A 155 IKALSLRNYQSQSLKSIRDIHHLTLHLSES 184 (549)
T ss_dssp EEETTCCEECTTTTTTCSEEEEEEEECSBS
T ss_pred ccCCcccccChhhhhccccCceEecccCcc
Confidence 888888887888877766555555555543
No 316
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.93 E-value=1.5e-26 Score=230.44 Aligned_cols=203 Identities=21% Similarity=0.211 Sum_probs=106.3
Q ss_pred CCCcEEEccCCccccCCChhh--cCCCCCCEEEcccccCCCCCCCCCC----ccccCCCCCcEEEccCCcccccCCcccc
Q 047800 10 HNLEYLGFGHNKLVGVVPATI--FNLSTLKHLELYNNSLSGSLSGTIP----RFIFNSSKLSILSLAKNSFSSFIPNTFG 83 (547)
Q Consensus 10 ~~L~~L~Ls~N~i~~~~~~~~--~~l~~L~~L~L~~N~l~~~~~~~~p----~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 83 (547)
++|+.|+|++|++++..|..+ ..+++|++|+|++|.++ +..| ..+..+++|++|+|++|+|+++.|..|+
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~----~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~ 166 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWA----TGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVR 166 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCS----STTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCC
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeeccccc----chhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhc
Confidence 345666666666655555555 55666666666666655 2222 2233455666666666666555555566
Q ss_pred CCCCCCeeecccccccc---ccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCc--ccccccCcchhhhccccCCcccEEE
Q 047800 84 NLRNLNELALHNNYLTS---STLELSFLSLLLNCKSLTHIGLSNNPLDGILHR--TYMGNLSHSLEFFVMSYCNDILYLD 158 (547)
Q Consensus 84 ~l~~L~~L~L~~N~i~~---~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~--~~~~~l~~~~~~~~~~~~~~L~~L~ 158 (547)
++++|++|+|++|++.+ ++.. ..+..+++|++|+|++|+|+.+... .++.+++ +|++|+
T Consensus 167 ~l~~L~~L~Ls~N~l~~~~~~~~~----~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~------------~L~~L~ 230 (310)
T 4glp_A 167 AFPALTSLDLSDNPGLGERGLMAA----LCPHKFPAIQNLALRNTGMETPTGVCAALAAAGV------------QPHSLD 230 (310)
T ss_dssp CCTTCCEEECCSCTTCHHHHHHTT----SCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTC------------CCSSEE
T ss_pred cCCCCCEEECCCCCCccchhhhHH----HhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCC------------CCCEEE
Confidence 66666666666665543 2111 0234555566666666665433221 0112222 566666
Q ss_pred ccCCcCCCCCCcCCCCC---ccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeE
Q 047800 159 LSSNFLTGPLPLEIGNL---KGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDL 235 (547)
Q Consensus 159 ls~N~l~~~~p~~~~~l---~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l 235 (547)
||+|+|++..|..+..+ ++|+.|+|++|.++ .+|..+. ++|++|+|++|++++. |. +..+++|+.|
T Consensus 231 Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-------~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L 299 (310)
T 4glp_A 231 LSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-------QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNL 299 (310)
T ss_dssp CTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-------SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCE
T ss_pred CCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-------chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEE
Confidence 66666655555555544 35666666666553 3344432 4566666666666543 22 4555566666
Q ss_pred eCCCCccc
Q 047800 236 DLSFNKLE 243 (547)
Q Consensus 236 ~l~~N~l~ 243 (547)
++++|+++
T Consensus 300 ~L~~N~l~ 307 (310)
T 4glp_A 300 TLDGNPFL 307 (310)
T ss_dssp ECSSTTTS
T ss_pred ECcCCCCC
Confidence 66666554
No 317
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.93 E-value=4.2e-25 Score=213.07 Aligned_cols=179 Identities=24% Similarity=0.293 Sum_probs=106.1
Q ss_pred CCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCeeeccccccccccCchhhHhhhcCCC
Q 047800 36 LKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRNLNELALHNNYLTSSTLELSFLSLLLNCK 115 (547)
Q Consensus 36 L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~ 115 (547)
.+++++++|.++ .+|..+. ++|+.|+|++|+|+++.+..|.++++|++|+|++|+|+++++. .|.+++
T Consensus 16 ~~~l~~~~~~l~-----~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-----~~~~l~ 83 (251)
T 3m19_A 16 KKEVDCQGKSLD-----SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAG-----VFDDLT 83 (251)
T ss_dssp GTEEECTTCCCS-----SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTT-----TTTTCT
T ss_pred CeEEecCCCCcc-----ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHh-----HhccCC
Confidence 445555555555 4554443 3555666666666655555556666666666666666555554 455566
Q ss_pred CCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCCCCCCcCCCCCccccccccccccccCccccC
Q 047800 116 SLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQ 195 (547)
Q Consensus 116 ~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~ 195 (547)
+|++|+|++|+|+++++.. +..++ +|++|+|++|+|++..+..|.++++|+.|+|++|.+ +
T Consensus 84 ~L~~L~L~~n~l~~~~~~~-~~~l~------------~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l------~ 144 (251)
T 3m19_A 84 ELGTLGLANNQLASLPLGV-FDHLT------------QLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQL------Q 144 (251)
T ss_dssp TCCEEECTTSCCCCCCTTT-TTTCT------------TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC------C
T ss_pred cCCEEECCCCcccccChhH-hcccC------------CCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcC------C
Confidence 6666666666665555444 33333 566666666666655555556666666666666665 3
Q ss_pred CCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCCccccc
Q 047800 196 GSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKLEGE 245 (547)
Q Consensus 196 ~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~ 245 (547)
+..++.|..+++|++|+|++|++++..+..|..+++|+.|++++|++.+.
T Consensus 145 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 145 SIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred ccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 34444566666666666666666666666666666667777776666643
No 318
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.93 E-value=6.8e-26 Score=244.84 Aligned_cols=250 Identities=20% Similarity=0.164 Sum_probs=169.1
Q ss_pred CCcccCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCcc
Q 047800 2 IPPEIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNT 81 (547)
Q Consensus 2 ip~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 81 (547)
||..+. ++++.|+|++|+|+++.+..|.++++|++|+|++|+|+ +..|..|.++++|++|+|++|+|+++.|++
T Consensus 22 ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~----~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 95 (570)
T 2z63_A 22 IPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ----TIEDGAYQSLSHLSTLILTGNPIQSLALGA 95 (570)
T ss_dssp CCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCC----EECTTTTTTCTTCCEEECTTCCCCEECTTT
T ss_pred cCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCC----ccCcccccCchhCCEEeCcCCcCCccCHhh
Confidence 455443 46788888888887777777888888888888888777 344556777788888888888888777777
Q ss_pred ccCCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCC-CcccccccCc------------chhhhcc
Q 047800 82 FGNLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGIL-HRTYMGNLSH------------SLEFFVM 148 (547)
Q Consensus 82 ~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~~l~~------------~~~~~~~ 148 (547)
|+++++|++|++++|+++++++. .|.++++|++|+|++|+++++. +.. +++++. .+....+
T Consensus 96 ~~~l~~L~~L~L~~n~l~~l~~~-----~~~~l~~L~~L~L~~n~l~~~~lp~~-~~~l~~L~~L~l~~n~l~~~~~~~~ 169 (570)
T 2z63_A 96 FSGLSSLQKLVAVETNLASLENF-----PIGHLKTLKELNVAHNLIQSFKLPEY-FSNLTNLEHLDLSSNKIQSIYCTDL 169 (570)
T ss_dssp TTTCTTCCEEECTTSCCCCSTTC-----SCTTCTTCCEEECCSSCCCCCCCCGG-GGGCTTCCEEECTTSCCCEECGGGG
T ss_pred hcCccccccccccccccccCCCc-----cccccccccEEecCCCccceecChhh-hcccCCCCEEeCcCCccceecHHHc
Confidence 88888888888888888777765 5777788888888888777643 333 444430 0001112
Q ss_pred ccCCcc----cEEEccCCcCCCCCCcCCCCCccccccccccccccC----------------------------------
Q 047800 149 SYCNDI----LYLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSG---------------------------------- 190 (547)
Q Consensus 149 ~~~~~L----~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~---------------------------------- 190 (547)
+.+.+| ..|++++|.+++..|..|..+ +|+.|++++|....
T Consensus 170 ~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~ 248 (570)
T 2z63_A 170 RVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDK 248 (570)
T ss_dssp HHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCT
T ss_pred cchhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcch
Confidence 222233 445555555554444444433 45555555542100
Q ss_pred -----------------cc-ccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCCccccccCCCCcc
Q 047800 191 -----------------YN-KLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKLEGEILRGGSF 252 (547)
Q Consensus 191 -----------------~n-~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~ 252 (547)
.+ .+.+..|+.|..+++|+.|++++|.++ .+|..+..+ +|+.|++++|.+...+. ..+
T Consensus 249 ~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~~l~~--~~l 324 (570)
T 2z63_A 249 SALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFGQFPT--LKL 324 (570)
T ss_dssp TTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCSSCCB--CBC
T ss_pred hhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCcccccCc--ccc
Confidence 00 345667788888999999999999998 577788888 99999999999984333 578
Q ss_pred CCcchhcccCcccccc
Q 047800 253 GNFLVELFEGNKLLYG 268 (547)
Q Consensus 253 ~~l~~l~l~~N~~~c~ 268 (547)
.+++.+++.+|.....
T Consensus 325 ~~L~~L~l~~n~~~~~ 340 (570)
T 2z63_A 325 KSLKRLTFTSNKGGNA 340 (570)
T ss_dssp SSCCEEEEESCBSCCB
T ss_pred cccCEEeCcCCccccc
Confidence 8899999999886543
No 319
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.93 E-value=2.1e-25 Score=221.85 Aligned_cols=197 Identities=22% Similarity=0.318 Sum_probs=169.2
Q ss_pred cCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCC
Q 047800 6 IGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNL 85 (547)
Q Consensus 6 ~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 85 (547)
+.++++|+.|++++|+|+.+ + .+..+++|++|+|++|+|+ .+|. +.++++|++|+|++|+|+++ ..|..+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~l-~-~~~~l~~L~~L~L~~n~i~-----~~~~-~~~l~~L~~L~L~~n~l~~~--~~~~~l 106 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQIT-----DLAP-LKNLTKITELELSGNPLKNV--SAIAGL 106 (308)
T ss_dssp HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCC-----CCGG-GTTCCSCCEEECCSCCCSCC--GGGTTC
T ss_pred HHHcCCcCEEEeeCCCccCc-h-hhhccCCCCEEEccCCcCC-----CChh-HccCCCCCEEEccCCcCCCc--hhhcCC
Confidence 44578999999999999854 4 6899999999999999999 5666 88999999999999999984 379999
Q ss_pred CCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCC
Q 047800 86 RNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLT 165 (547)
Q Consensus 86 ~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~ 165 (547)
++|++|+|++|+|++++ .+..+++|++|+|++|+++++.+ +..++ +|++|++++|+++
T Consensus 107 ~~L~~L~l~~n~l~~~~-------~l~~l~~L~~L~l~~n~l~~~~~---l~~l~------------~L~~L~l~~n~l~ 164 (308)
T 1h6u_A 107 QSIKTLDLTSTQITDVT-------PLAGLSNLQVLYLDLNQITNISP---LAGLT------------NLQYLSIGNAQVS 164 (308)
T ss_dssp TTCCEEECTTSCCCCCG-------GGTTCTTCCEEECCSSCCCCCGG---GGGCT------------TCCEEECCSSCCC
T ss_pred CCCCEEECCCCCCCCch-------hhcCCCCCCEEECCCCccCcCcc---ccCCC------------CccEEEccCCcCC
Confidence 99999999999999865 47889999999999999988754 44445 9999999999999
Q ss_pred CCCCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCCccccc
Q 047800 166 GPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKLEGE 245 (547)
Q Consensus 166 ~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~ 245 (547)
+..+ +.++++|+.|++++|.++ .++. +..+++|+.|+|++|++++..+ +..+++|+.|++++|++++.
T Consensus 165 ~~~~--l~~l~~L~~L~l~~n~l~-------~~~~-l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~~ 232 (308)
T 1h6u_A 165 DLTP--LANLSKLTTLKADDNKIS-------DISP-LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQ 232 (308)
T ss_dssp CCGG--GTTCTTCCEEECCSSCCC-------CCGG-GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEECC
T ss_pred CChh--hcCCCCCCEEECCCCccC-------cChh-hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeecC
Confidence 6544 889999999999999994 2332 8899999999999999996653 89999999999999999864
Q ss_pred c
Q 047800 246 I 246 (547)
Q Consensus 246 ~ 246 (547)
+
T Consensus 233 ~ 233 (308)
T 1h6u_A 233 P 233 (308)
T ss_dssp C
T ss_pred C
Confidence 3
No 320
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.93 E-value=9.9e-25 Score=220.74 Aligned_cols=234 Identities=21% Similarity=0.307 Sum_probs=187.6
Q ss_pred ccCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccC
Q 047800 5 EIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGN 84 (547)
Q Consensus 5 ~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 84 (547)
.|..+++|++|+|++|+|+++.+ |.++++|++|+|++|.++ .+| .+.++++|++|+|++|+|+++.+ +..
T Consensus 61 ~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~-----~~~-~~~~l~~L~~L~l~~n~i~~~~~--~~~ 130 (347)
T 4fmz_A 61 GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKIT-----DIS-ALQNLTNLRELYLNEDNISDISP--LAN 130 (347)
T ss_dssp TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC-----CCG-GGTTCTTCSEEECTTSCCCCCGG--GTT
T ss_pred hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCccc-----Cch-HHcCCCcCCEEECcCCcccCchh--hcc
Confidence 48889999999999999997654 999999999999999998 554 68899999999999999998544 999
Q ss_pred CCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccC------cch-hhhccccCCcccEE
Q 047800 85 LRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLS------HSL-EFFVMSYCNDILYL 157 (547)
Q Consensus 85 l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~------~~~-~~~~~~~~~~L~~L 157 (547)
+++|++|++++|......+ .+..+++|++|++++|.++.+.+-....++. ..+ ....+..+.+|+.|
T Consensus 131 l~~L~~L~l~~n~~~~~~~------~~~~l~~L~~L~l~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L 204 (347)
T 4fmz_A 131 LTKMYSLNLGANHNLSDLS------PLSNMTGLNYLTVTESKVKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYF 204 (347)
T ss_dssp CTTCCEEECTTCTTCCCCG------GGTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECTTSCCCCCGGGGGCTTCCEE
T ss_pred CCceeEEECCCCCCccccc------chhhCCCCcEEEecCCCcCCchhhccCCCCCEEEccCCcccccccccCCCcccee
Confidence 9999999999996655443 4889999999999999998876511111111 000 11126667778888
Q ss_pred EccCCcCCCCCCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeC
Q 047800 158 DLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDL 237 (547)
Q Consensus 158 ~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l 237 (547)
++++|.+++..+ +..+++|+.|++++|.++ ..+. +..+++|++|++++|++++. ..+..+++|+.|++
T Consensus 205 ~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~-------~~~~-~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l 272 (347)
T 4fmz_A 205 TAYVNQITDITP--VANMTRLNSLKIGNNKIT-------DLSP-LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNV 272 (347)
T ss_dssp ECCSSCCCCCGG--GGGCTTCCEEECCSSCCC-------CCGG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEEC
T ss_pred ecccCCCCCCch--hhcCCcCCEEEccCCccC-------CCcc-hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEc
Confidence 888888875443 778888888888888884 3333 88999999999999999864 47899999999999
Q ss_pred CCCccccccCCCCccCCcchhcccCccccc
Q 047800 238 SFNKLEGEILRGGSFGNFLVELFEGNKLLY 267 (547)
Q Consensus 238 ~~N~l~~~~~~~~~~~~l~~l~l~~N~~~c 267 (547)
++|++++. +....+.+++.+++.+|++..
T Consensus 273 ~~n~l~~~-~~~~~l~~L~~L~L~~n~l~~ 301 (347)
T 4fmz_A 273 GSNQISDI-SVLNNLSQLNSLFLNNNQLGN 301 (347)
T ss_dssp CSSCCCCC-GGGGGCTTCSEEECCSSCCCG
T ss_pred cCCccCCC-hhhcCCCCCCEEECcCCcCCC
Confidence 99999975 334678899999999998754
No 321
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.93 E-value=8.2e-25 Score=230.56 Aligned_cols=238 Identities=26% Similarity=0.358 Sum_probs=149.4
Q ss_pred ccCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccC
Q 047800 5 EIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGN 84 (547)
Q Consensus 5 ~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 84 (547)
.+..+++|++|+|++|.|++..+ |.++++|++|+|++|+++ .+++ +.++++|++|+|++|+++++.+ |.+
T Consensus 63 ~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~-----~~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~ 132 (466)
T 1o6v_A 63 GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIA-----DITP-LANLTNLTGLTLFNNQITDIDP--LKN 132 (466)
T ss_dssp TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC-----CCGG-GTTCTTCCEEECCSSCCCCCGG--GTT
T ss_pred chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccc-----cChh-hcCCCCCCEEECCCCCCCCChH--HcC
Confidence 37788899999999999987654 888999999999999888 4544 7888899999999998888543 888
Q ss_pred CCCCCeeeccccccccccCch--------------hhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCc------ch-
Q 047800 85 LRNLNELALHNNYLTSSTLEL--------------SFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSH------SL- 143 (547)
Q Consensus 85 l~~L~~L~L~~N~i~~~~~~~--------------~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~------~~- 143 (547)
+++|++|++++|.+++++.-. .....+.++++|++|++++|+++.+..-.-..++.. .+
T Consensus 133 l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~ 212 (466)
T 1o6v_A 133 LTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQIS 212 (466)
T ss_dssp CTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCC
T ss_pred CCCCCEEECCCCccCCChhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCChhhccCCCCCEEEecCCccc
Confidence 888888888888887764210 000125667778888888888776632110111110 00
Q ss_pred hhhccccCCcccEEEccCCcCCCCCCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCC
Q 047800 144 EFFVMSYCNDILYLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIP 223 (547)
Q Consensus 144 ~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~ 223 (547)
....++.+++|+.|++++|++++. ..+..+++|+.|++++|.++ +..| +..+++|+.|++++|++++..+
T Consensus 213 ~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~------~~~~--~~~l~~L~~L~l~~n~l~~~~~ 282 (466)
T 1o6v_A 213 DITPLGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQIS------NLAP--LSGLTKLTELKLGANQISNISP 282 (466)
T ss_dssp CCGGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCC------CCGG--GTTCTTCSEEECCSSCCCCCGG
T ss_pred ccccccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccc------cchh--hhcCCCCCEEECCCCccCcccc
Confidence 011244556667777777766643 34566667777777776663 2222 5555556666666665554333
Q ss_pred cchhCCCCCCeEeCCCCccccccCCCCccCCcchhcccCccc
Q 047800 224 ISLEKLSYLDDLDLSFNKLEGEILRGGSFGNFLVELFEGNKL 265 (547)
Q Consensus 224 ~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~ 265 (547)
+..+++|+.|++++|++++..+ ...+.+++.+++.+|.+
T Consensus 283 --~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~L~~n~l 321 (466)
T 1o6v_A 283 --LAGLTALTNLELNENQLEDISP-ISNLKNLTYLTLYFNNI 321 (466)
T ss_dssp --GTTCTTCSEEECCSSCCSCCGG-GGGCTTCSEEECCSSCC
T ss_pred --ccCCCccCeEEcCCCcccCchh-hcCCCCCCEEECcCCcC
Confidence 5555555555555555554332 23445555555555544
No 322
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.93 E-value=9.3e-25 Score=230.12 Aligned_cols=225 Identities=25% Similarity=0.327 Sum_probs=159.3
Q ss_pred CCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCC
Q 047800 8 NLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRN 87 (547)
Q Consensus 8 ~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 87 (547)
.+++|+.|++++|.++. +| .+..+++|++|+|++|.++ .+|+ +.++++|++|+|++|+++++.+ |+++++
T Consensus 44 ~l~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~-----~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~ 113 (466)
T 1o6v_A 44 DLDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLT-----DITP-LKNLTKLVDILMNNNQIADITP--LANLTN 113 (466)
T ss_dssp HHHTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCC-----CCGG-GTTCTTCCEEECCSSCCCCCGG--GTTCTT
T ss_pred HhccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccC-----Cchh-hhccccCCEEECCCCccccChh--hcCCCC
Confidence 36789999999999985 44 4889999999999999999 5665 8899999999999999999655 999999
Q ss_pred CCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCc---------chhhhccccCCcccEEE
Q 047800 88 LNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSH---------SLEFFVMSYCNDILYLD 158 (547)
Q Consensus 88 L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~---------~~~~~~~~~~~~L~~L~ 158 (547)
|++|+|++|.+++++ .+..+++|++|++++|+++++.. +..++. ......++.+++|+.|+
T Consensus 114 L~~L~L~~n~l~~~~-------~~~~l~~L~~L~l~~n~l~~~~~---~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~ 183 (466)
T 1o6v_A 114 LTGLTLFNNQITDID-------PLKNLTNLNRLELSSNTISDISA---LSGLTSLQQLSFGNQVTDLKPLANLTTLERLD 183 (466)
T ss_dssp CCEEECCSSCCCCCG-------GGTTCTTCSEEEEEEEEECCCGG---GTTCTTCSEEEEEESCCCCGGGTTCTTCCEEE
T ss_pred CCEEECCCCCCCCCh-------HHcCCCCCCEEECCCCccCCChh---hccCCcccEeecCCcccCchhhccCCCCCEEE
Confidence 999999999999875 47899999999999999988743 222210 00112366677788888
Q ss_pred ccCCcCCCCCCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCC
Q 047800 159 LSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLS 238 (547)
Q Consensus 159 ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~ 238 (547)
+++|.+++. ..+..+++|+.|++++|.++ +..| ++.+++|++|++++|++++. ..+..+++|+.|+++
T Consensus 184 l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~------~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~ 251 (466)
T 1o6v_A 184 ISSNKVSDI--SVLAKLTNLESLIATNNQIS------DITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLA 251 (466)
T ss_dssp CCSSCCCCC--GGGGGCTTCSEEECCSSCCC------CCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECC
T ss_pred CcCCcCCCC--hhhccCCCCCEEEecCCccc------cccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECC
Confidence 888877743 24677777777777777763 2222 44555555555555555532 245555555555555
Q ss_pred CCccccccCCCCccCCcchhcccCccc
Q 047800 239 FNKLEGEILRGGSFGNFLVELFEGNKL 265 (547)
Q Consensus 239 ~N~l~~~~~~~~~~~~l~~l~l~~N~~ 265 (547)
+|.+.+..+ ...+.+++.+++.+|.+
T Consensus 252 ~n~l~~~~~-~~~l~~L~~L~l~~n~l 277 (466)
T 1o6v_A 252 NNQISNLAP-LSGLTKLTELKLGANQI 277 (466)
T ss_dssp SSCCCCCGG-GTTCTTCSEEECCSSCC
T ss_pred CCccccchh-hhcCCCCCEEECCCCcc
Confidence 555554333 23344555555555544
No 323
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.92 E-value=1.1e-24 Score=210.09 Aligned_cols=181 Identities=23% Similarity=0.277 Sum_probs=162.6
Q ss_pred CCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCCCC
Q 047800 10 HNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRNLN 89 (547)
Q Consensus 10 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 89 (547)
.+.+.+++++|.++. +|..+. ++|+.|+|++|+|+ +..|..|.++++|++|+|++|+|+++.|..|.++++|+
T Consensus 14 ~~~~~l~~~~~~l~~-~p~~~~--~~l~~L~L~~n~l~----~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 86 (251)
T 3m19_A 14 EGKKEVDCQGKSLDS-VPSGIP--ADTEKLDLQSTGLA----TLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELG 86 (251)
T ss_dssp GGGTEEECTTCCCSS-CCSCCC--TTCCEEECTTSCCC----CCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred CCCeEEecCCCCccc-cCCCCC--CCCCEEEccCCCcC----ccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCC
Confidence 356889999999994 555554 68999999999999 56667889999999999999999999999999999999
Q ss_pred eeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCCCCCC
Q 047800 90 ELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGPLP 169 (547)
Q Consensus 90 ~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~~~p 169 (547)
+|+|++|+|+++++. .|..+++|++|+|++|+|+++++.. +..++ +|++|+|++|+|++..+
T Consensus 87 ~L~L~~n~l~~~~~~-----~~~~l~~L~~L~L~~N~l~~~~~~~-~~~l~------------~L~~L~Ls~N~l~~~~~ 148 (251)
T 3m19_A 87 TLGLANNQLASLPLG-----VFDHLTQLDKLYLGGNQLKSLPSGV-FDRLT------------KLKELRLNTNQLQSIPA 148 (251)
T ss_dssp EEECTTSCCCCCCTT-----TTTTCTTCCEEECCSSCCCCCCTTT-TTTCT------------TCCEEECCSSCCCCCCT
T ss_pred EEECCCCcccccChh-----HhcccCCCCEEEcCCCcCCCcChhH-hccCC------------cccEEECcCCcCCccCH
Confidence 999999999999987 8999999999999999999888776 45555 99999999999998888
Q ss_pred cCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCC
Q 047800 170 LEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGA 221 (547)
Q Consensus 170 ~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 221 (547)
..|.++++|+.|+|++|.+ ++..++.|..+++|+.|+|++|+++..
T Consensus 149 ~~~~~l~~L~~L~L~~N~l------~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 149 GAFDKLTNLQTLSLSTNQL------QSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTTTCTTCCEEECCSSCC------SCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred HHcCcCcCCCEEECCCCcC------CccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 8899999999999999999 567777899999999999999999865
No 324
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.92 E-value=1.6e-25 Score=214.42 Aligned_cols=207 Identities=15% Similarity=0.171 Sum_probs=174.9
Q ss_pred ccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCc-ccccCCccccCCCCCCeeeccc-ccc
Q 047800 21 KLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNS-FSSFIPNTFGNLRNLNELALHN-NYL 98 (547)
Q Consensus 21 ~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~L~~-N~i 98 (547)
.++. +|. +. ++|++|+|++|+|+ +..+..|.++++|++|+|++|+ |+++.+.+|.++++|++|+|++ |+|
T Consensus 22 ~l~~-ip~-~~--~~l~~L~l~~n~l~----~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l 93 (239)
T 2xwt_C 22 DIQR-IPS-LP--PSTQTLKLIETHLR----TIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNL 93 (239)
T ss_dssp SCSS-CCC-CC--TTCCEEEEESCCCS----EECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTC
T ss_pred Cccc-cCC-CC--CcccEEEEeCCcce----EECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCe
Confidence 3664 555 43 48999999999999 3334478899999999999997 9998888999999999999999 999
Q ss_pred ccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCccc---EEEccCC-cCCCCCCcCCCC
Q 047800 99 TSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDIL---YLDLSSN-FLTGPLPLEIGN 174 (547)
Q Consensus 99 ~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~---~L~ls~N-~l~~~~p~~~~~ 174 (547)
+++++. .|.++++|++|++++|++++++. +..+. +|+ +|++++| .+++..+..|.+
T Consensus 94 ~~i~~~-----~f~~l~~L~~L~l~~n~l~~lp~---~~~l~------------~L~~L~~L~l~~N~~l~~i~~~~~~~ 153 (239)
T 2xwt_C 94 TYIDPD-----ALKELPLLKFLGIFNTGLKMFPD---LTKVY------------STDIFFILEITDNPYMTSIPVNAFQG 153 (239)
T ss_dssp CEECTT-----SEECCTTCCEEEEEEECCCSCCC---CTTCC------------BCCSEEEEEEESCTTCCEECTTTTTT
T ss_pred eEcCHH-----HhCCCCCCCEEeCCCCCCccccc---ccccc------------ccccccEEECCCCcchhhcCcccccc
Confidence 999987 89999999999999999998654 34444 666 9999999 999888888999
Q ss_pred Ccccc-ccccccccccCccccCCCCCcchhcCCCCCEEECcCCc-CCCCCCcchhCC-CCCCeEeCCCCccccccCCCCc
Q 047800 175 LKGLV-GVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNN-LSGAIPISLEKL-SYLDDLDLSFNKLEGEILRGGS 251 (547)
Q Consensus 175 l~~L~-~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~~~~~~~l-~~L~~l~l~~N~l~~~~~~~~~ 251 (547)
+++|+ .|++++|.++ ...+..|.. ++|+.|+|++|+ +++..+..|..+ ++|+.|++++|++++.++. .
T Consensus 154 l~~L~~~L~l~~n~l~------~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~--~ 224 (239)
T 2xwt_C 154 LCNETLTLKLYNNGFT------SVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK--G 224 (239)
T ss_dssp TBSSEEEEECCSCCCC------EECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT--T
T ss_pred hhcceeEEEcCCCCCc------ccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh--H
Confidence 99999 9999999984 233344555 899999999995 998888899999 9999999999999975544 6
Q ss_pred cCCcchhcccCcc
Q 047800 252 FGNFLVELFEGNK 264 (547)
Q Consensus 252 ~~~l~~l~l~~N~ 264 (547)
+.++..+.+.++.
T Consensus 225 ~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 225 LEHLKELIARNTW 237 (239)
T ss_dssp CTTCSEEECTTC-
T ss_pred hccCceeeccCcc
Confidence 8888888887764
No 325
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.92 E-value=2.7e-27 Score=254.14 Aligned_cols=142 Identities=20% Similarity=0.144 Sum_probs=106.5
Q ss_pred CCCCCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCc
Q 047800 313 RPSNDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANN 392 (547)
Q Consensus 313 ~~~~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~N 392 (547)
++..|+||+++++++++++..||||||++||+|.+++.+.+ .++.. +|+.||+.||+|+| ++||+||||||+|
T Consensus 297 ~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~~-~l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKPeN 369 (569)
T 4azs_A 297 QPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGE-EIDRE---KILGSLLRSLAALE---KQGFWHDDVRPWN 369 (569)
T ss_dssp SCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTTC-CCCHH---HHHHHHHHHHHHHH---HTTCEESCCCGGG
T ss_pred hcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhCC-CCCHH---HHHHHHHHHHHHHH---HCCceeccCchHh
Confidence 33469999999999999999999999999999999998865 56654 48899999999999 9999999999999
Q ss_pred EEeCCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCC
Q 047800 393 VLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPT 462 (547)
Q Consensus 393 ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~ 462 (547)
||++.++.+||+|||+|+............+||+.|+|||++.+ .+..++|+||+|++++++.++..++
T Consensus 370 ILL~~dg~vKL~DFGlAr~~~~~~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 370 VMVDARQHARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp EEECTTSCEEECCCTTEESCC---CCSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred EEECCCCCEEEeecccCeeCCCCCccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 99999999999999999876554444455689999999999975 4677899999999988876655443
No 326
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.92 E-value=1.4e-24 Score=227.72 Aligned_cols=220 Identities=20% Similarity=0.199 Sum_probs=164.1
Q ss_pred CcccCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccc
Q 047800 3 PPEIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTF 82 (547)
Q Consensus 3 p~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 82 (547)
+..++++++|++|+|++|.|+++ | .|..+++|++|+|++|+|+ .+| ++.+++|++|+|++|+|+++ | |
T Consensus 35 ~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~-----~~~--~~~l~~L~~L~Ls~N~l~~~-~--~ 102 (457)
T 3bz5_A 35 TISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNIT-----TLD--LSQNTNLTYLACDSNKLTNL-D--V 102 (457)
T ss_dssp EEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCS-----CCC--CTTCTTCSEEECCSSCCSCC-C--C
T ss_pred ccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCC-----eEc--cccCCCCCEEECcCCCCcee-e--c
Confidence 34677889999999999999975 4 6999999999999999998 455 78899999999999999995 4 8
Q ss_pred cCCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCc----------chhhhccccCC
Q 047800 83 GNLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSH----------SLEFFVMSYCN 152 (547)
Q Consensus 83 ~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~----------~~~~~~~~~~~ 152 (547)
+++++|++|+|++|++++++ +..+++|++|++++|+|+++. +++++. .+....++.++
T Consensus 103 ~~l~~L~~L~L~~N~l~~l~--------~~~l~~L~~L~l~~N~l~~l~----l~~l~~L~~L~l~~n~~~~~~~~~~l~ 170 (457)
T 3bz5_A 103 TPLTKLTYLNCDTNKLTKLD--------VSQNPLLTYLNCARNTLTEID----VSHNTQLTELDCHLNKKITKLDVTPQT 170 (457)
T ss_dssp TTCTTCCEEECCSSCCSCCC--------CTTCTTCCEEECTTSCCSCCC----CTTCTTCCEEECTTCSCCCCCCCTTCT
T ss_pred CCCCcCCEEECCCCcCCeec--------CCCCCcCCEEECCCCccceec----cccCCcCCEEECCCCCcccccccccCC
Confidence 99999999999999998863 568899999999999999873 222220 11222355566
Q ss_pred cccEEEccCCcCCCCCCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCC
Q 047800 153 DILYLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYL 232 (547)
Q Consensus 153 ~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L 232 (547)
+|++|++++|++++ +| ++.+++|+.|++++|.++ +. .++.+++|+.|++++|++++ +| +..+++|
T Consensus 171 ~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~------~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L 235 (457)
T 3bz5_A 171 QLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNIT------KL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQL 235 (457)
T ss_dssp TCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCS------CC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTC
T ss_pred cCCEEECCCCccce-ec--cccCCCCCEEECcCCcCC------ee---ccccCCCCCEEECcCCcccc-cC--ccccCCC
Confidence 77777777777775 33 667777777777777774 22 36777788888888888876 44 6777788
Q ss_pred CeEeCCCCccccccCCCCccCCcchhcccCc
Q 047800 233 DDLDLSFNKLEGEILRGGSFGNFLVELFEGN 263 (547)
Q Consensus 233 ~~l~l~~N~l~~~~~~~~~~~~l~~l~l~~N 263 (547)
+.|++++|++++.++ +.+.++..+.+.+|
T Consensus 236 ~~L~l~~N~l~~~~~--~~l~~L~~L~l~~n 264 (457)
T 3bz5_A 236 TYFDCSVNPLTELDV--STLSKLTTLHCIQT 264 (457)
T ss_dssp SEEECCSSCCSCCCC--TTCTTCCEEECTTC
T ss_pred CEEEeeCCcCCCcCH--HHCCCCCEEeccCC
Confidence 888888888776543 23444444444443
No 327
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.92 E-value=2.1e-24 Score=226.33 Aligned_cols=232 Identities=20% Similarity=0.159 Sum_probs=174.9
Q ss_pred ccCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccC
Q 047800 5 EIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGN 84 (547)
Q Consensus 5 ~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 84 (547)
+|+.+++|++|+|++|+|+++ | ++.+++|++|+|++|+|+ .+| ++++++|++|+|++|+|+++ | ++.
T Consensus 59 ~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~-----~~~--~~~l~~L~~L~L~~N~l~~l-~--~~~ 125 (457)
T 3bz5_A 59 GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLT-----NLD--VTPLTKLTYLNCDTNKLTKL-D--VSQ 125 (457)
T ss_dssp TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCS-----CCC--CTTCTTCCEEECCSSCCSCC-C--CTT
T ss_pred hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCc-----eee--cCCCCcCCEEECCCCcCCee-c--CCC
Confidence 688899999999999999975 3 889999999999999998 444 78899999999999999984 4 889
Q ss_pred CCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCC-CCCCCCcccccccC------cchhhhccccCCcccEE
Q 047800 85 LRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNP-LDGILHRTYMGNLS------HSLEFFVMSYCNDILYL 157 (547)
Q Consensus 85 l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~~l~------~~~~~~~~~~~~~L~~L 157 (547)
+++|++|++++|+|++++ +..+++|++|++++|+ +..+.... ..++. ..+....++.+++|+.|
T Consensus 126 l~~L~~L~l~~N~l~~l~--------l~~l~~L~~L~l~~n~~~~~~~~~~-l~~L~~L~ls~n~l~~l~l~~l~~L~~L 196 (457)
T 3bz5_A 126 NPLLTYLNCARNTLTEID--------VSHNTQLTELDCHLNKKITKLDVTP-QTQLTTLDCSFNKITELDVSQNKLLNRL 196 (457)
T ss_dssp CTTCCEEECTTSCCSCCC--------CTTCTTCCEEECTTCSCCCCCCCTT-CTTCCEEECCSSCCCCCCCTTCTTCCEE
T ss_pred CCcCCEEECCCCccceec--------cccCCcCCEEECCCCCccccccccc-CCcCCEEECCCCccceeccccCCCCCEE
Confidence 999999999999998863 4456666666666663 22221000 11111 11122235666799999
Q ss_pred EccCCcCCCCCCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCC-------
Q 047800 158 DLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLS------- 230 (547)
Q Consensus 158 ~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~------- 230 (547)
++++|++++. .++.+++|+.|++++|+++ + +| +..+++|+.|++++|++++..+..+..+.
T Consensus 197 ~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~------~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n 264 (457)
T 3bz5_A 197 NCDTNNITKL---DLNQNIQLTFLDCSSNKLT------E-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQT 264 (457)
T ss_dssp ECCSSCCSCC---CCTTCTTCSEEECCSSCCS------C-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTTC
T ss_pred ECcCCcCCee---ccccCCCCCEEECcCCccc------c-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccCC
Confidence 9999999965 4899999999999999995 3 55 88999999999999999987765555554
Q ss_pred CCCeEeCCCCccccccCCCCccCCcchhcccCccccccCCC
Q 047800 231 YLDDLDLSFNKLEGEILRGGSFGNFLVELFEGNKLLYGSPC 271 (547)
Q Consensus 231 ~L~~l~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~c~~~c 271 (547)
+|+.|++++|++.+..+ .+.+.+++.+++.+|+..-..+|
T Consensus 265 ~L~~L~l~~n~~~~~~~-~~~l~~L~~L~Ls~n~~l~~l~~ 304 (457)
T 3bz5_A 265 DLLEIDLTHNTQLIYFQ-AEGCRKIKELDVTHNTQLYLLDC 304 (457)
T ss_dssp CCSCCCCTTCTTCCEEE-CTTCTTCCCCCCTTCTTCCEEEC
T ss_pred CCCEEECCCCccCCccc-ccccccCCEEECCCCcccceecc
Confidence 55666666666655554 35678899999999986544443
No 328
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.92 E-value=1.2e-25 Score=224.00 Aligned_cols=224 Identities=23% Similarity=0.212 Sum_probs=182.8
Q ss_pred CCcEEEccCCccccCCC---hhhcCCCCCCEEEcccccCCCCCCCCCCccc--cCCCCCcEEEccCCcccccCC----cc
Q 047800 11 NLEYLGFGHNKLVGVVP---ATIFNLSTLKHLELYNNSLSGSLSGTIPRFI--FNSSKLSILSLAKNSFSSFIP----NT 81 (547)
Q Consensus 11 ~L~~L~Ls~N~i~~~~~---~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~~----~~ 81 (547)
.++.|.++++.++...- ..+..+++|++|+|++|.++ +..|..+ .++++|++|+|++|+|++..+ ..
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~----~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~ 140 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKIT----GTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQ 140 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCB----SCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHH
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEec----cchhhhhhhccCCCCCEEEeecccccchhhhhHHHH
Confidence 47888888888753211 12334577999999999999 6888888 889999999999999998655 44
Q ss_pred ccCCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCC---CCCcccccccCcchhhhccccCCcccEEE
Q 047800 82 FGNLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDG---ILHRTYMGNLSHSLEFFVMSYCNDILYLD 158 (547)
Q Consensus 82 ~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~---~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ 158 (547)
+..+++|++|+|++|+|+++++. .|.++++|++|+|++|++.+ +....+.+.++ +|++|+
T Consensus 141 ~~~~~~L~~L~Ls~n~l~~~~~~-----~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~------------~L~~L~ 203 (310)
T 4glp_A 141 QWLKPGLKVLSIAQAHSPAFSCE-----QVRAFPALTSLDLSDNPGLGERGLMAALCPHKFP------------AIQNLA 203 (310)
T ss_dssp TTBCSCCCEEEEECCSSCCCCTT-----SCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSC------------CCCSCB
T ss_pred hhhccCCCEEEeeCCCcchhhHH-----HhccCCCCCEEECCCCCCccchhhhHHHhhhcCC------------CCCEEE
Confidence 56899999999999999999887 89999999999999999875 33333234555 999999
Q ss_pred ccCCcCCCCCCc----CCCCCccccccccccccccCccccCCCCCcchhcC---CCCCEEECcCCcCCCCCCcchhCCCC
Q 047800 159 LSSNFLTGPLPL----EIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDL---SNNNTLNLSNNNLSGAIPISLEKLSY 231 (547)
Q Consensus 159 ls~N~l~~~~p~----~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l---~~L~~L~l~~N~l~~~~~~~~~~l~~ 231 (547)
|++|+++. ++. .+.++++|++|+|++|.+ ++..|+.+..+ ++|++|+|++|+++ .+|..+. ++
T Consensus 204 Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l------~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~ 273 (310)
T 4glp_A 204 LRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSL------RATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AK 273 (310)
T ss_dssp CCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCC------CCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SC
T ss_pred CCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCC------CccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CC
Confidence 99999973 333 357889999999999999 55668777777 69999999999999 5566654 79
Q ss_pred CCeEeCCCCccccccCCCCccCCcchhcccCcccc
Q 047800 232 LDDLDLSFNKLEGEILRGGSFGNFLVELFEGNKLL 266 (547)
Q Consensus 232 L~~l~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~ 266 (547)
|+.|++++|++++.+ ....+.+++.+++.+|++.
T Consensus 274 L~~L~Ls~N~l~~~~-~~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 274 LRVLDLSSNRLNRAP-QPDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp CSCEECCSCCCCSCC-CTTSCCCCSCEECSSTTTS
T ss_pred CCEEECCCCcCCCCc-hhhhCCCccEEECcCCCCC
Confidence 999999999999753 3567889999999999875
No 329
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.91 E-value=2.4e-24 Score=218.25 Aligned_cols=233 Identities=18% Similarity=0.140 Sum_probs=178.2
Q ss_pred CCCcccCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCc-cccCCCCCcE-EEccCCcccccC
Q 047800 1 EIPPEIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPR-FIFNSSKLSI-LSLAKNSFSSFI 78 (547)
Q Consensus 1 ~ip~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~-~~~~l~~L~~-L~Ls~N~l~~~~ 78 (547)
+||..+ .++++.|+|++|+|+.+.+++|.++++|++|+|++|++. +.+|. .|.++++|.+ +.++.|+|+.+.
T Consensus 23 ~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~----~~i~~~~f~~L~~l~~~l~~~~N~l~~l~ 96 (350)
T 4ay9_X 23 EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVL----EVIEADVFSNLPKLHEIRIEKANNLLYIN 96 (350)
T ss_dssp SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTC----CEECTTSBCSCTTCCEEEEEEETTCCEEC
T ss_pred ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCC----CccChhHhhcchhhhhhhcccCCcccccC
Confidence 366655 368999999999999888888999999999999999987 46665 5668888765 667789999988
Q ss_pred CccccCCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcC-CCCCCCCCcccccccCcchhhhccccCCcccEE
Q 047800 79 PNTFGNLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSN-NPLDGILHRTYMGNLSHSLEFFVMSYCNDILYL 157 (547)
Q Consensus 79 ~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L 157 (547)
|++|.++++|++|++++|+|+.+++. .+....++..|++++ |++..+....|.+... .++.|
T Consensus 97 ~~~f~~l~~L~~L~l~~n~l~~~~~~-----~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~------------~l~~L 159 (350)
T 4ay9_X 97 PEAFQNLPNLQYLLISNTGIKHLPDV-----HKIHSLQKVLLDIQDNINIHTIERNSFVGLSF------------ESVIL 159 (350)
T ss_dssp TTSBCCCTTCCEEEEEEECCSSCCCC-----TTCCBSSCEEEEEESCTTCCEECTTSSTTSBS------------SCEEE
T ss_pred chhhhhccccccccccccccccCCch-----hhcccchhhhhhhccccccccccccchhhcch------------hhhhh
Confidence 99999999999999999999998876 677778888999865 6888887777444333 78999
Q ss_pred EccCCcCCCCCCcCCCCCcccccccccc-ccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEe
Q 047800 158 DLSSNFLTGPLPLEIGNLKGLVGVDFSM-NNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLD 236 (547)
Q Consensus 158 ~ls~N~l~~~~p~~~~~l~~L~~L~ls~-N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~ 236 (547)
+|++|+|+.+.+. .....+|+.|++++ |.+ +...+++|..+++|++|+|++|+|+..++..|.+ |+.|.
T Consensus 160 ~L~~N~i~~i~~~-~f~~~~L~~l~l~~~n~l------~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~---L~~L~ 229 (350)
T 4ay9_X 160 WLNKNGIQEIHNS-AFNGTQLDELNLSDNNNL------EELPNDVFHGASGPVILDISRTRIHSLPSYGLEN---LKKLR 229 (350)
T ss_dssp ECCSSCCCEECTT-SSTTEEEEEEECTTCTTC------CCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTT---CCEEE
T ss_pred ccccccccCCChh-hccccchhHHhhccCCcc------cCCCHHHhccCcccchhhcCCCCcCccChhhhcc---chHhh
Confidence 9999999955444 44567899999985 555 3444567999999999999999999766656554 45555
Q ss_pred CCCCccccccCCCCccCCcchhcccCccccc
Q 047800 237 LSFNKLEGEILRGGSFGNFLVELFEGNKLLY 267 (547)
Q Consensus 237 l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~c 267 (547)
+.++.--...|....+.+++.+++. |+..|
T Consensus 230 ~l~~~~l~~lP~l~~l~~L~~l~l~-~~~~c 259 (350)
T 4ay9_X 230 ARSTYNLKKLPTLEKLVALMEASLT-YPSHC 259 (350)
T ss_dssp CTTCTTCCCCCCTTTCCSCCEEECS-CHHHH
T ss_pred hccCCCcCcCCCchhCcChhhCcCC-CCccc
Confidence 4443323345555678888887775 44444
No 330
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.91 E-value=4.2e-24 Score=212.50 Aligned_cols=212 Identities=20% Similarity=0.298 Sum_probs=180.2
Q ss_pred CcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCee
Q 047800 12 LEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRNLNEL 91 (547)
Q Consensus 12 L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 91 (547)
+..+.+..+.+++. ..+.++++|++|++++|.++ .+| .+..+++|++|+|++|+|+++.+ |..+++|++|
T Consensus 21 ~~~~~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~-----~l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L 90 (308)
T 1h6u_A 21 AIKIAAGKSNVTDT--VTQADLDGITTLSAFGTGVT-----TIE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITEL 90 (308)
T ss_dssp HHHHHTTCSSTTSE--ECHHHHHTCCEEECTTSCCC-----CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEE
T ss_pred HHHHHhCCCCcCce--ecHHHcCCcCEEEeeCCCcc-----Cch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEE
Confidence 44456677777654 34567889999999999999 676 58889999999999999999555 9999999999
Q ss_pred eccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCCCCCCcC
Q 047800 92 ALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGPLPLE 171 (547)
Q Consensus 92 ~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~~ 171 (547)
+|++|+|++++ .+..+++|++|+|++|+|+++.+ +..++ +|++|++++|.+++..+
T Consensus 91 ~L~~n~l~~~~-------~~~~l~~L~~L~l~~n~l~~~~~---l~~l~------------~L~~L~l~~n~l~~~~~-- 146 (308)
T 1h6u_A 91 ELSGNPLKNVS-------AIAGLQSIKTLDLTSTQITDVTP---LAGLS------------NLQVLYLDLNQITNISP-- 146 (308)
T ss_dssp ECCSCCCSCCG-------GGTTCTTCCEEECTTSCCCCCGG---GTTCT------------TCCEEECCSSCCCCCGG--
T ss_pred EccCCcCCCch-------hhcCCCCCCEEECCCCCCCCchh---hcCCC------------CCCEEECCCCccCcCcc--
Confidence 99999999864 58899999999999999998643 44555 99999999999996644
Q ss_pred CCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCCccccccCCCCc
Q 047800 172 IGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKLEGEILRGGS 251 (547)
Q Consensus 172 ~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~ 251 (547)
+..+++|+.|++++|.++ .++. +..+++|+.|++++|++++..+ +..+++|+.|++++|++++..+ ...
T Consensus 147 l~~l~~L~~L~l~~n~l~-------~~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~-l~~ 215 (308)
T 1h6u_A 147 LAGLTNLQYLSIGNAQVS-------DLTP-LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP-LAN 215 (308)
T ss_dssp GGGCTTCCEEECCSSCCC-------CCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG-GTT
T ss_pred ccCCCCccEEEccCCcCC-------CChh-hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc-ccC
Confidence 889999999999999995 3333 8999999999999999996654 8999999999999999997664 467
Q ss_pred cCCcchhcccCcccccc
Q 047800 252 FGNFLVELFEGNKLLYG 268 (547)
Q Consensus 252 ~~~l~~l~l~~N~~~c~ 268 (547)
+.+++.+++.+|++.+.
T Consensus 216 l~~L~~L~l~~N~i~~~ 232 (308)
T 1h6u_A 216 TSNLFIVTLTNQTITNQ 232 (308)
T ss_dssp CTTCCEEEEEEEEEECC
T ss_pred CCCCCEEEccCCeeecC
Confidence 88999999999998653
No 331
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.90 E-value=8.7e-23 Score=220.63 Aligned_cols=220 Identities=25% Similarity=0.235 Sum_probs=127.4
Q ss_pred CCcccCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCcc
Q 047800 2 IPPEIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNT 81 (547)
Q Consensus 2 ip~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 81 (547)
||..+. ++|+.|+|++|+|+.+. . .+++|++|+|++|+|+ .+|. .+++|++|+|++|+|+++ |.
T Consensus 55 lp~~l~--~~L~~L~L~~N~l~~lp-~---~l~~L~~L~Ls~N~l~-----~lp~---~l~~L~~L~Ls~N~l~~l-~~- 118 (622)
T 3g06_A 55 LPDCLP--AHITTLVIPDNNLTSLP-A---LPPELRTLEVSGNQLT-----SLPV---LPPGLLELSIFSNPLTHL-PA- 118 (622)
T ss_dssp CCSCCC--TTCSEEEECSCCCSCCC-C---CCTTCCEEEECSCCCS-----CCCC---CCTTCCEEEECSCCCCCC-CC-
T ss_pred cChhhC--CCCcEEEecCCCCCCCC-C---cCCCCCEEEcCCCcCC-----cCCC---CCCCCCEEECcCCcCCCC-CC-
Confidence 566555 68888888888888543 3 5678888888888887 6666 567788888888888773 33
Q ss_pred ccCCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCc------chhhhccccCCccc
Q 047800 82 FGNLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSH------SLEFFVMSYCNDIL 155 (547)
Q Consensus 82 ~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~------~~~~~~~~~~~~L~ 155 (547)
.+++|+.|+|++|+|+.++.. +++|++|+|++|+|++++.. ..++.. .+.... ..+++|+
T Consensus 119 --~l~~L~~L~L~~N~l~~lp~~---------l~~L~~L~Ls~N~l~~l~~~--~~~L~~L~L~~N~l~~l~-~~~~~L~ 184 (622)
T 3g06_A 119 --LPSGLCKLWIFGNQLTSLPVL---------PPGLQELSVSDNQLASLPAL--PSELCKLWAYNNQLTSLP-MLPSGLQ 184 (622)
T ss_dssp --CCTTCCEEECCSSCCSCCCCC---------CTTCCEEECCSSCCSCCCCC--CTTCCEEECCSSCCSCCC-CCCTTCC
T ss_pred --CCCCcCEEECCCCCCCcCCCC---------CCCCCEEECcCCcCCCcCCc--cCCCCEEECCCCCCCCCc-ccCCCCc
Confidence 456677777777777766542 36677777777777665321 111110 000001 2234555
Q ss_pred EEEccCCcCCCCCCcCCCC-----------------CccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcC
Q 047800 156 YLDLSSNFLTGPLPLEIGN-----------------LKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNL 218 (547)
Q Consensus 156 ~L~ls~N~l~~~~p~~~~~-----------------l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l 218 (547)
.|++++|+|++ +|..+.+ +++|+.|++++|.++ + +| ..+++|+.|+|++|+|
T Consensus 185 ~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~L~------~-lp---~~l~~L~~L~Ls~N~L 253 (622)
T 3g06_A 185 ELSVSDNQLAS-LPTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGNRLT------S-LP---VLPSELKELMVSGNRL 253 (622)
T ss_dssp EEECCSSCCSC-CCCCCTTCCEEECCSSCCSSCCCCCTTCCEEECCSSCCS------C-CC---CCCTTCCEEECCSSCC
T ss_pred EEECCCCCCCC-CCCccchhhEEECcCCcccccCCCCCCCCEEEccCCccC------c-CC---CCCCcCcEEECCCCCC
Confidence 56666655553 2222111 134445555555443 2 33 2345666666666666
Q ss_pred CCCCCcchhCCCCCCeEeCCCCccccccCCCCccCCcchhcccCcccc
Q 047800 219 SGAIPISLEKLSYLDDLDLSFNKLEGEILRGGSFGNFLVELFEGNKLL 266 (547)
Q Consensus 219 ~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~ 266 (547)
++ +|. .+++|+.|++++|+|+..+.....+.++..+++.+|++.
T Consensus 254 ~~-lp~---~~~~L~~L~Ls~N~L~~lp~~l~~l~~L~~L~L~~N~l~ 297 (622)
T 3g06_A 254 TS-LPM---LPSGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPLS 297 (622)
T ss_dssp SC-CCC---CCTTCCEEECCSSCCCSCCGGGGGSCTTCEEECCSCCCC
T ss_pred Cc-CCc---ccccCcEEeCCCCCCCcCCHHHhhccccCEEEecCCCCC
Confidence 63 332 455666666666666643332355566666666666654
No 332
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=2e-25 Score=227.33 Aligned_cols=248 Identities=18% Similarity=0.186 Sum_probs=185.8
Q ss_pred CcccCCCCCCcEEEccCCccccCCC----hhhcCCC-CCCEEEcccccCCCCCCCCCCccccCC-----CCCcEEEccCC
Q 047800 3 PPEIGNLHNLEYLGFGHNKLVGVVP----ATIFNLS-TLKHLELYNNSLSGSLSGTIPRFIFNS-----SKLSILSLAKN 72 (547)
Q Consensus 3 p~~~~~l~~L~~L~Ls~N~i~~~~~----~~~~~l~-~L~~L~L~~N~l~~~~~~~~p~~~~~l-----~~L~~L~Ls~N 72 (547)
|..+...++|+.|+|++|.|++..+ ..|.+++ +|++|+|++|+|+ +..+..+..+ ++|++|+|++|
T Consensus 15 ~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~----~~~~~~l~~~l~~~~~~L~~L~Ls~n 90 (362)
T 3goz_A 15 EEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLG----FKNSDELVQILAAIPANVTSLNLSGN 90 (362)
T ss_dssp HHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGG----GSCHHHHHHHHHTSCTTCCEEECCSS
T ss_pred HHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCC----HHHHHHHHHHHhccCCCccEEECcCC
Confidence 3344555669999999999998877 8889999 9999999999999 4555555554 99999999999
Q ss_pred cccccCCcccc----CC-CCCCeeeccccccccccCchhhHhhhcC-CCCCcEEeCcCCCCCCCCCcccccccCcchhhh
Q 047800 73 SFSSFIPNTFG----NL-RNLNELALHNNYLTSSTLELSFLSLLLN-CKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFF 146 (547)
Q Consensus 73 ~l~~~~~~~~~----~l-~~L~~L~L~~N~i~~~~~~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~ 146 (547)
+|++..+..+. .+ ++|++|+|++|+|+..+.. .+...+.. .++|++|+|++|+|+......+..
T Consensus 91 ~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~-~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~--------- 160 (362)
T 3goz_A 91 FLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSS-EFKQAFSNLPASITSLNLRGNDLGIKSSDELIQ--------- 160 (362)
T ss_dssp CGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHH-HHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHH---------
T ss_pred cCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHH-HHHHHHHhCCCceeEEEccCCcCCHHHHHHHHH---------
Confidence 99987776544 44 8999999999999887764 23334556 369999999999998654433211
Q ss_pred ccccCC-cccEEEccCCcCCCCCCcCCCC----C-ccccccccccccccCccccCCCCCcchhcC-CCCCEEECcCCcCC
Q 047800 147 VMSYCN-DILYLDLSSNFLTGPLPLEIGN----L-KGLVGVDFSMNNFSGYNKLQGSIPESFGDL-SNNNTLNLSNNNLS 219 (547)
Q Consensus 147 ~~~~~~-~L~~L~ls~N~l~~~~p~~~~~----l-~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l-~~L~~L~l~~N~l~ 219 (547)
.+..+. +|++|+|++|+|++..+..++. + ++|+.|+|++|.+++.. ...++..+..+ ++|++|+|++|+++
T Consensus 161 ~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~--~~~l~~~l~~~~~~L~~L~Ls~N~l~ 238 (362)
T 3goz_A 161 ILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKS--YAELAYIFSSIPNHVVSLNLCLNCLH 238 (362)
T ss_dssp HHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSC--HHHHHHHHHHSCTTCCEEECCSSCCC
T ss_pred HHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhH--HHHHHHHHhcCCCCceEEECcCCCCC
Confidence 111222 8999999999998777654443 4 69999999999995210 01245666664 59999999999999
Q ss_pred CCCC----cchhCCCCCCeEeCCCCcccccc--------CCCCccCCcchhcccCcccc
Q 047800 220 GAIP----ISLEKLSYLDDLDLSFNKLEGEI--------LRGGSFGNFLVELFEGNKLL 266 (547)
Q Consensus 220 ~~~~----~~~~~l~~L~~l~l~~N~l~~~~--------~~~~~~~~l~~l~l~~N~~~ 266 (547)
+..+ ..+..+++|+.|++++|.+.... .......+++.+++.+|++.
T Consensus 239 ~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~ 297 (362)
T 3goz_A 239 GPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIH 297 (362)
T ss_dssp CCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCC
T ss_pred cHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCC
Confidence 7655 34577899999999999944322 22245677888999999874
No 333
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.90 E-value=9.8e-26 Score=231.70 Aligned_cols=253 Identities=17% Similarity=0.179 Sum_probs=196.0
Q ss_pred CCcccCCCCCCcEEEccCCccccCCCh----hhcCCCCCCEEEcccccCCCCCCCCCCccc-------cCCCCCcEEEcc
Q 047800 2 IPPEIGNLHNLEYLGFGHNKLVGVVPA----TIFNLSTLKHLELYNNSLSGSLSGTIPRFI-------FNSSKLSILSLA 70 (547)
Q Consensus 2 ip~~~~~l~~L~~L~Ls~N~i~~~~~~----~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~-------~~l~~L~~L~Ls 70 (547)
++..+..+++|+.|+|++|+|+...+. .|..+++|++|+|++|.+.. ..+.+|..+ ..+++|++|+|+
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~-l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGR-VKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTS-CGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCc-cccchhHHHHHHHHHHhhCCcccEEECC
Confidence 566778889999999999999876444 47789999999999976652 114566655 688999999999
Q ss_pred CCcccc----cCCccccCCCCCCeeeccccccccccCchhhHhhhcCC---------CCCcEEeCcCCCCCCCCCccccc
Q 047800 71 KNSFSS----FIPNTFGNLRNLNELALHNNYLTSSTLELSFLSLLLNC---------KSLTHIGLSNNPLDGILHRTYMG 137 (547)
Q Consensus 71 ~N~l~~----~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l---------~~L~~L~Ls~N~l~~~~~~~~~~ 137 (547)
+|.|++ .+|..+..+++|++|+|++|.|+...+. .+...+..+ ++|++|+|++|+|+......+.
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~-~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~- 180 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGA-KIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWA- 180 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHH-HHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHH-
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHH-HHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHH-
Confidence 999998 5788899999999999999999765543 122234444 8999999999999733222100
Q ss_pred ccCcchhhhccccCCcccEEEccCCcCC--C---CCCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEE
Q 047800 138 NLSHSLEFFVMSYCNDILYLDLSSNFLT--G---PLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLN 212 (547)
Q Consensus 138 ~l~~~~~~~~~~~~~~L~~L~ls~N~l~--~---~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~ 212 (547)
..++.+++|++|+|++|.|+ + ..|..+..+++|+.|+|++|.++... .+.+|..+..+++|+.|+
T Consensus 181 --------~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g--~~~l~~~l~~~~~L~~L~ 250 (386)
T 2ca6_A 181 --------KTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLG--SSALAIALKSWPNLRELG 250 (386)
T ss_dssp --------HHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHH--HHHHHHHGGGCTTCCEEE
T ss_pred --------HHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHH--HHHHHHHHccCCCcCEEE
Confidence 12334459999999999998 2 34558889999999999999983100 036788899999999999
Q ss_pred CcCCcCCCC----CCcchhC--CCCCCeEeCCCCcccc----ccCCC--CccCCcchhcccCccccc
Q 047800 213 LSNNNLSGA----IPISLEK--LSYLDDLDLSFNKLEG----EILRG--GSFGNFLVELFEGNKLLY 267 (547)
Q Consensus 213 l~~N~l~~~----~~~~~~~--l~~L~~l~l~~N~l~~----~~~~~--~~~~~l~~l~l~~N~~~c 267 (547)
|++|++++. ++..+.. +++|+.|+|++|.+++ ..+.. ..+.++..+++.+|++..
T Consensus 251 L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~ 317 (386)
T 2ca6_A 251 LNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 317 (386)
T ss_dssp CTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred CCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCc
Confidence 999999866 4566644 8999999999999997 23333 347899999999998753
No 334
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.90 E-value=2.3e-23 Score=194.83 Aligned_cols=180 Identities=21% Similarity=0.175 Sum_probs=126.1
Q ss_pred cEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCeee
Q 047800 13 EYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRNLNELA 92 (547)
Q Consensus 13 ~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 92 (547)
+.+++++++++.+ |..+ .++|++|+|++|+|+ +..+..|.++++|++|+|++|+|+++.+..|.++++|++|+
T Consensus 10 ~~v~c~~~~l~~~-p~~~--~~~l~~L~l~~n~l~----~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 82 (208)
T 2o6s_A 10 TTVECYSQGRTSV-PTGI--PAQTTYLDLETNSLK----SLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLN 82 (208)
T ss_dssp TEEECCSSCCSSC-CSCC--CTTCSEEECCSSCCC----CCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CEEEecCCCccCC-CCCC--CCCCcEEEcCCCccC----cCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEE
Confidence 5677777777743 3333 357778888888777 33334456777788888888888776666777777888888
Q ss_pred ccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCCCCCCcCC
Q 047800 93 LHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGPLPLEI 172 (547)
Q Consensus 93 L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~ 172 (547)
|++|+|+++++. .|.++++|++|+|++|+|+++++.. +..++ +|++|++++|++++..+..|
T Consensus 83 Ls~n~l~~~~~~-----~~~~l~~L~~L~L~~N~l~~~~~~~-~~~l~------------~L~~L~l~~N~l~~~~~~~~ 144 (208)
T 2o6s_A 83 LSTNQLQSLPNG-----VFDKLTQLKELALNTNQLQSLPDGV-FDKLT------------QLKDLRLYQNQLKSVPDGVF 144 (208)
T ss_dssp CCSSCCCCCCTT-----TTTTCTTCCEEECCSSCCCCCCTTT-TTTCT------------TCCEEECCSSCCSCCCTTTT
T ss_pred CCCCcCCccCHh-----HhcCccCCCEEEcCCCcCcccCHhH-hccCC------------cCCEEECCCCccceeCHHHh
Confidence 888877777765 5777777777777777777766654 44444 77777777777776666667
Q ss_pred CCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCC
Q 047800 173 GNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLS 230 (547)
Q Consensus 173 ~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~ 230 (547)
.++++|+.|++++|.+. +.+++|+.|+++.|+++|.+|..++.++
T Consensus 145 ~~l~~L~~L~l~~N~~~-------------~~~~~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 145 DRLTSLQYIWLHDNPWD-------------CTCPGIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp TTCTTCCEEECCSCCBC-------------CCTTTTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred ccCCCccEEEecCCCee-------------cCCCCHHHHHHHHHhCCceeeccCcccc
Confidence 77777777777777662 2455677777777777777776666554
No 335
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.89 E-value=2.4e-22 Score=210.52 Aligned_cols=213 Identities=32% Similarity=0.337 Sum_probs=117.2
Q ss_pred CCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCCCC
Q 047800 10 HNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRNLN 89 (547)
Q Consensus 10 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 89 (547)
++|++|+|++|+|++ +| .|+++++|++|++++|+++ .+|..+ .+|++|++++|++++ +| .|+++++|+
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~-----~lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~ 198 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLK-----KLPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLT 198 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCS-----CCCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCc-----ccCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCC
Confidence 577888888888875 45 4778888888888888777 455443 467777777777777 44 467777777
Q ss_pred eeeccccccccccCchh-------------hHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccE
Q 047800 90 ELALHNNYLTSSTLELS-------------FLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILY 156 (547)
Q Consensus 90 ~L~L~~N~i~~~~~~~~-------------~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~ 156 (547)
+|++++|++++++.... ....|..+++|++|++++|++++++.. +.+|+.
T Consensus 199 ~L~l~~N~l~~l~~~~~~L~~L~l~~n~l~~lp~~~~l~~L~~L~l~~N~l~~l~~~-----------------~~~L~~ 261 (454)
T 1jl5_A 199 AIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYADNNLLKTLPDL-----------------PPSLEA 261 (454)
T ss_dssp EEECCSSCCSSCCCCCTTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSSCCSC-----------------CTTCCE
T ss_pred EEECCCCcCCcCCCCcCcccEEECcCCcCCcccccCCCCCCCEEECCCCcCCccccc-----------------ccccCE
Confidence 77777777766543200 000133444555555555555443221 124444
Q ss_pred EEccCCcCCCCCCcCCCCCccccccccccccccCc--------------cccCCCCCcchhcC-CCCCEEECcCCcCCCC
Q 047800 157 LDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSGY--------------NKLQGSIPESFGDL-SNNNTLNLSNNNLSGA 221 (547)
Q Consensus 157 L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~--------------n~l~~~~p~~~~~l-~~L~~L~l~~N~l~~~ 221 (547)
|++++|++++ +|.. +++|+.|++++|.+++. |.+++ +..+ ++|+.|++++|++++
T Consensus 262 L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l~~~~~~L~~L~l~~N~l~~-----i~~~~~~L~~L~Ls~N~l~~- 331 (454)
T 1jl5_A 262 LNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRS-----LCDLPPSLEELNVSNNKLIE- 331 (454)
T ss_dssp EECCSSCCSC-CCCC---CTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCSE-----ECCCCTTCCEEECCSSCCSC-
T ss_pred EECCCCcccc-cCcc---cCcCCEEECcCCccCcccCcCCcCCEEECcCCcCCc-----ccCCcCcCCEEECCCCcccc-
Confidence 4444444443 2221 13444444444444321 11111 1122 366666666666664
Q ss_pred CCcchhCCCCCCeEeCCCCccccccCCCCccCCcchhcccCccccc
Q 047800 222 IPISLEKLSYLDDLDLSFNKLEGEILRGGSFGNFLVELFEGNKLLY 267 (547)
Q Consensus 222 ~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~c 267 (547)
+|.. +++|+.|++++|++++.+. .+.+++.+++.+|++..
T Consensus 332 lp~~---~~~L~~L~L~~N~l~~lp~---~l~~L~~L~L~~N~l~~ 371 (454)
T 1jl5_A 332 LPAL---PPRLERLIASFNHLAEVPE---LPQNLKQLHVEYNPLRE 371 (454)
T ss_dssp CCCC---CTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCSS
T ss_pred cccc---CCcCCEEECCCCccccccc---hhhhccEEECCCCCCCc
Confidence 3332 3566666666666664322 35566666666666654
No 336
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.89 E-value=1.1e-22 Score=190.12 Aligned_cols=169 Identities=24% Similarity=0.304 Sum_probs=148.2
Q ss_pred CCcccCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCcc
Q 047800 2 IPPEIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNT 81 (547)
Q Consensus 2 ip~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 81 (547)
+|..+ .++|++|+|++|+|+++.+..|.++++|++|+|++|+|+ +..+..|.++++|++|+|++|+|+++.+..
T Consensus 22 ~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~----~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~ 95 (208)
T 2o6s_A 22 VPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ----SLPNGVFNKLTSLTYLNLSTNQLQSLPNGV 95 (208)
T ss_dssp CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC----CCCTTTTTTCTTCCEEECCSSCCCCCCTTT
T ss_pred CCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccC----ccChhhcCCCCCcCEEECCCCcCCccCHhH
Confidence 45433 468999999999999888888999999999999999999 333445679999999999999999988888
Q ss_pred ccCCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccC
Q 047800 82 FGNLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSS 161 (547)
Q Consensus 82 ~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~ 161 (547)
|.++++|++|+|++|+|+++++. .|..+++|++|+|++|+|+++++.. +..++ +|++|++++
T Consensus 96 ~~~l~~L~~L~L~~N~l~~~~~~-----~~~~l~~L~~L~l~~N~l~~~~~~~-~~~l~------------~L~~L~l~~ 157 (208)
T 2o6s_A 96 FDKLTQLKELALNTNQLQSLPDG-----VFDKLTQLKDLRLYQNQLKSVPDGV-FDRLT------------SLQYIWLHD 157 (208)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTT-----TTTTCTTCCEEECCSSCCSCCCTTT-TTTCT------------TCCEEECCS
T ss_pred hcCccCCCEEEcCCCcCcccCHh-----HhccCCcCCEEECCCCccceeCHHH-hccCC------------CccEEEecC
Confidence 99999999999999999999887 7899999999999999999887765 55555 999999999
Q ss_pred CcCCCCCCcCCCCCccccccccccccccCccccCCCCCcchhcCCC
Q 047800 162 NFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSN 207 (547)
Q Consensus 162 N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~ 207 (547)
|.+.+ .+++|+.|+++.|.+ +|.+|+.++.++.
T Consensus 158 N~~~~-------~~~~l~~L~~~~n~~------~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 158 NPWDC-------TCPGIRYLSEWINKH------SGVVRNSAGSVAP 190 (208)
T ss_dssp CCBCC-------CTTTTHHHHHHHHHC------TTTBBCTTSSBCT
T ss_pred CCeec-------CCCCHHHHHHHHHhC------CceeeccCccccC
Confidence 98874 456899999999998 7899999887765
No 337
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.89 E-value=3.8e-23 Score=220.80 Aligned_cols=182 Identities=25% Similarity=0.289 Sum_probs=154.4
Q ss_pred CCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCe
Q 047800 11 NLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRNLNE 90 (547)
Q Consensus 11 ~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 90 (547)
+|+.|+|++|+|++ +|..+ .++|++|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. |.+ +|++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-----~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~ 124 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-----SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKH 124 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-----CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCE
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-----ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCE
Confidence 89999999999997 55544 378999999999999 788 457999999999999999 666 765 9999
Q ss_pred eeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCCCCCCc
Q 047800 91 LALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGPLPL 170 (547)
Q Consensus 91 L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~ 170 (547)
|+|++|+|++++. .+++|++|+|++|+|++++. .++ +|++|+|++|+|++ +|.
T Consensus 125 L~Ls~N~l~~lp~---------~l~~L~~L~Ls~N~l~~lp~-----~l~------------~L~~L~Ls~N~L~~-lp~ 177 (571)
T 3cvr_A 125 LDVDNNQLTMLPE---------LPALLEYINADNNQLTMLPE-----LPT------------SLEVLSVRNNQLTF-LPE 177 (571)
T ss_dssp EECCSSCCSCCCC---------CCTTCCEEECCSSCCSCCCC-----CCT------------TCCEEECCSSCCSC-CCC
T ss_pred EECCCCcCCCCCC---------cCccccEEeCCCCccCcCCC-----cCC------------CcCEEECCCCCCCC-cch
Confidence 9999999999663 47899999999999998654 234 89999999999997 566
Q ss_pred CCCCCccccccccccccccCccccCCCCCcchhcCCCC-------CEEECcCCcCCCCCCcchhCCCCCCeEeCCCCccc
Q 047800 171 EIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNN-------NTLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKLE 243 (547)
Q Consensus 171 ~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L-------~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~ 243 (547)
|. ++|+.|+|++|.|+ .+|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|+++
T Consensus 178 -l~--~~L~~L~Ls~N~L~-------~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~ 243 (571)
T 3cvr_A 178 -LP--ESLEALDVSTNLLE-------SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLS 243 (571)
T ss_dssp -CC--TTCCEEECCSSCCS-------SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCC
T ss_pred -hh--CCCCEEECcCCCCC-------chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCC
Confidence 76 89999999999995 5666 554 67 99999999999 57777888999999999999999
Q ss_pred cccCC
Q 047800 244 GEILR 248 (547)
Q Consensus 244 ~~~~~ 248 (547)
+..|.
T Consensus 244 ~~~p~ 248 (571)
T 3cvr_A 244 SRIRE 248 (571)
T ss_dssp HHHHH
T ss_pred CcCHH
Confidence 76553
No 338
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.89 E-value=4.9e-23 Score=215.72 Aligned_cols=218 Identities=23% Similarity=0.242 Sum_probs=102.3
Q ss_pred CCcccCCCCCCcEEEccCCccccCCChhhcCCCCC-------------CEEEcccccCCCCCCCCCCccccCCCCCcEEE
Q 047800 2 IPPEIGNLHNLEYLGFGHNKLVGVVPATIFNLSTL-------------KHLELYNNSLSGSLSGTIPRFIFNSSKLSILS 68 (547)
Q Consensus 2 ip~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L-------------~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~ 68 (547)
||++|+++++|+.|+|++|++.+..|..++++++| ++|++++|.++ .+|.. .++|++|+
T Consensus 26 iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~-----~lp~~---~~~L~~L~ 97 (454)
T 1jl5_A 26 MPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLS-----SLPEL---PPHLESLV 97 (454)
T ss_dssp --------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCS-----CCCSC---CTTCSEEE
T ss_pred CChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccc-----cCCCC---cCCCCEEE
Confidence 56666666666666666666666666666665543 56666666555 33331 14455555
Q ss_pred ccCCcccccCCccccCCCCCCeeeccccccccccCchh-------------hHhhhcCCCCCcEEeCcCCCCCCCCCccc
Q 047800 69 LAKNSFSSFIPNTFGNLRNLNELALHNNYLTSSTLELS-------------FLSLLLNCKSLTHIGLSNNPLDGILHRTY 135 (547)
Q Consensus 69 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~-------------~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 135 (547)
+++|++++ +|.. +++|++|++++|++++++.... ....|.++++|++|++++|++++++..
T Consensus 98 l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l~~~~~~L~~L~L~~n~l~~lp~~~~l~~L~~L~l~~N~l~~lp~~-- 171 (454)
T 1jl5_A 98 ASCNSLTE-LPEL---PQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDL-- 171 (454)
T ss_dssp CCSSCCSS-CCCC---CTTCCEEECCSSCCSCCCSCCTTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSCCCCC--
T ss_pred ccCCcCCc-cccc---cCCCcEEECCCCccCcccCCCCCCCEEECcCCCCCCCcccCCCCCCCEEECCCCcCcccCCC--
Confidence 55555555 3322 1344444444444443321100 000133334444444444444332211
Q ss_pred ccccCcchhhhccccCCcccEEEccCCcCCCCCCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcC
Q 047800 136 MGNLSHSLEFFVMSYCNDILYLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSN 215 (547)
Q Consensus 136 ~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~ 215 (547)
..+|++|++++|++++ +| .++++++|+.|++++|.++ .+|+.. ++|++|++++
T Consensus 172 ---------------~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~-------~l~~~~---~~L~~L~l~~ 224 (454)
T 1jl5_A 172 ---------------PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLK-------KLPDLP---LSLESIVAGN 224 (454)
T ss_dssp ---------------CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCS-------SCCCCC---TTCCEEECCS
T ss_pred ---------------cccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCC-------cCCCCc---CcccEEECcC
Confidence 0145555555555554 33 3555555555555555553 122221 3556666666
Q ss_pred CcCCCCCCcchhCCCCCCeEeCCCCccccccCCCCccCCcchhcccCccc
Q 047800 216 NNLSGAIPISLEKLSYLDDLDLSFNKLEGEILRGGSFGNFLVELFEGNKL 265 (547)
Q Consensus 216 N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~ 265 (547)
|+++ .+| .+..+++|+.|++++|++++.+. ...+++.+++.+|.+
T Consensus 225 n~l~-~lp-~~~~l~~L~~L~l~~N~l~~l~~---~~~~L~~L~l~~N~l 269 (454)
T 1jl5_A 225 NILE-ELP-ELQNLPFLTTIYADNNLLKTLPD---LPPSLEALNVRDNYL 269 (454)
T ss_dssp SCCS-SCC-CCTTCTTCCEEECCSSCCSSCCS---CCTTCCEEECCSSCC
T ss_pred CcCC-ccc-ccCCCCCCCEEECCCCcCCcccc---cccccCEEECCCCcc
Confidence 6665 344 25566666666666666664322 134555566666554
No 339
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=1.8e-24 Score=222.34 Aligned_cols=233 Identities=18% Similarity=0.263 Sum_probs=176.7
Q ss_pred CcccCCCCCCcEEEccCCc---cccCCChhh-------cCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCC
Q 047800 3 PPEIGNLHNLEYLGFGHNK---LVGVVPATI-------FNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKN 72 (547)
Q Consensus 3 p~~~~~l~~L~~L~Ls~N~---i~~~~~~~~-------~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N 72 (547)
+..|..+++|+.|+|++|. +++.+|..+ ..+++|++|+|++|.|++.....+|..+..+++|++|+|++|
T Consensus 53 ~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n 132 (386)
T 2ca6_A 53 SENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNN 132 (386)
T ss_dssp HHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSS
T ss_pred HHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCC
Confidence 3457899999999999964 444556555 789999999999999993222247888899999999999999
Q ss_pred cccccCCccccC----C---------CCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCccccccc
Q 047800 73 SFSSFIPNTFGN----L---------RNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNL 139 (547)
Q Consensus 73 ~l~~~~~~~~~~----l---------~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l 139 (547)
.|+...+..+.. + ++|++|+|++|+|+..... .+...|..+++|++|+|++|+|+......+.
T Consensus 133 ~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~-~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~--- 208 (386)
T 2ca6_A 133 GLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMK-EWAKTFQSHRLLHTVKMVQNGIRPEGIEHLL--- 208 (386)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHH-HHHHHHHHCTTCCEEECCSSCCCHHHHHHHH---
T ss_pred CCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHH-HHHHHHHhCCCcCEEECcCCCCCHhHHHHHH---
Confidence 998655544443 4 9999999999999733221 1223677899999999999999732100000
Q ss_pred CcchhhhccccCCcccEEEccCCcCC----CCCCcCCCCCccccccccccccccCccccCCCCCcchhc--CCCCCEEEC
Q 047800 140 SHSLEFFVMSYCNDILYLDLSSNFLT----GPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGD--LSNNNTLNL 213 (547)
Q Consensus 140 ~~~~~~~~~~~~~~L~~L~ls~N~l~----~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~--l~~L~~L~l 213 (547)
...+..+++|++|+|++|.|+ +.+|..+..+++|+.|+|++|.+++.. ...+|..+.. +++|+.|+|
T Consensus 209 -----~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~--~~~l~~~l~~~~~~~L~~L~L 281 (386)
T 2ca6_A 209 -----LEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARG--AAAVVDAFSKLENIGLQTLRL 281 (386)
T ss_dssp -----HTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHH--HHHHHHHHHTCSSCCCCEEEC
T ss_pred -----HHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhh--HHHHHHHHhhccCCCeEEEEC
Confidence 002234459999999999996 567888999999999999999984110 0014566644 899999999
Q ss_pred cCCcCCC----CCCcch-hCCCCCCeEeCCCCcccccc
Q 047800 214 SNNNLSG----AIPISL-EKLSYLDDLDLSFNKLEGEI 246 (547)
Q Consensus 214 ~~N~l~~----~~~~~~-~~l~~L~~l~l~~N~l~~~~ 246 (547)
++|++++ .+|..+ ..+++|+.|++++|++++..
T Consensus 282 ~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 282 QYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp CSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred cCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 9999997 477777 67899999999999998643
No 340
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.88 E-value=5.8e-22 Score=214.19 Aligned_cols=204 Identities=26% Similarity=0.254 Sum_probs=148.6
Q ss_pred CCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCC
Q 047800 8 NLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRN 87 (547)
Q Consensus 8 ~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 87 (547)
.+++|+.|+|++|+|+++. . .+++|++|+|++|+|+ .+|. .+++|+.|+|++|+|++ +|.. +++
T Consensus 79 ~l~~L~~L~Ls~N~l~~lp-~---~l~~L~~L~Ls~N~l~-----~l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~ 142 (622)
T 3g06_A 79 LPPELRTLEVSGNQLTSLP-V---LPPGLLELSIFSNPLT-----HLPA---LPSGLCKLWIFGNQLTS-LPVL---PPG 142 (622)
T ss_dssp CCTTCCEEEECSCCCSCCC-C---CCTTCCEEEECSCCCC-----CCCC---CCTTCCEEECCSSCCSC-CCCC---CTT
T ss_pred cCCCCCEEEcCCCcCCcCC-C---CCCCCCEEECcCCcCC-----CCCC---CCCCcCEEECCCCCCCc-CCCC---CCC
Confidence 5688999999999988544 3 6788899999999888 5665 45677777777777777 4433 367
Q ss_pred CCeeeccccccccccCchhhHhhhcC--------------CCCCcEEeCcCCCCCCCCCcccccccCc------chhhhc
Q 047800 88 LNELALHNNYLTSSTLELSFLSLLLN--------------CKSLTHIGLSNNPLDGILHRTYMGNLSH------SLEFFV 147 (547)
Q Consensus 88 L~~L~L~~N~i~~~~~~~~~~~~~~~--------------l~~L~~L~Ls~N~l~~~~~~~~~~~l~~------~~~~~~ 147 (547)
|++|+|++|+|++++... ..+.. +++|+.|+|++|+|++++.. ..++.. .+...
T Consensus 143 L~~L~Ls~N~l~~l~~~~---~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~~l~~~--~~~L~~L~L~~N~l~~l- 216 (622)
T 3g06_A 143 LQELSVSDNQLASLPALP---SELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLASLPTL--PSELYKLWAYNNRLTSL- 216 (622)
T ss_dssp CCEEECCSSCCSCCCCCC---TTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSCCCCC--CTTCCEEECCSSCCSSC-
T ss_pred CCEEECcCCcCCCcCCcc---CCCCEEECCCCCCCCCcccCCCCcEEECCCCCCCCCCCc--cchhhEEECcCCccccc-
Confidence 777777777777655321 12222 27788888888888876432 111110 00000
Q ss_pred cccCCcccEEEccCCcCCCCCCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchh
Q 047800 148 MSYCNDILYLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLE 227 (547)
Q Consensus 148 ~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 227 (547)
-..+++|+.|+|++|+|++ +| ..+++|+.|++++|.|+ .+|. .+++|+.|+|++|+|+ .+|..+.
T Consensus 217 ~~~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-------~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~ 281 (622)
T 3g06_A 217 PALPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-------SLPM---LPSGLLSLSVYRNQLT-RLPESLI 281 (622)
T ss_dssp CCCCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-------CCCC---CCTTCCEEECCSSCCC-SCCGGGG
T ss_pred CCCCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-------cCCc---ccccCcEEeCCCCCCC-cCCHHHh
Confidence 1123689999999999996 45 45689999999999995 5565 6689999999999999 6788899
Q ss_pred CCCCCCeEeCCCCccccccCC
Q 047800 228 KLSYLDDLDLSFNKLEGEILR 248 (547)
Q Consensus 228 ~l~~L~~l~l~~N~l~~~~~~ 248 (547)
.+++|+.|++++|++++..+.
T Consensus 282 ~l~~L~~L~L~~N~l~~~~~~ 302 (622)
T 3g06_A 282 HLSSETTVNLEGNPLSERTLQ 302 (622)
T ss_dssp GSCTTCEEECCSCCCCHHHHH
T ss_pred hccccCEEEecCCCCCCcCHH
Confidence 999999999999999976543
No 341
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.88 E-value=1.7e-22 Score=204.62 Aligned_cols=217 Identities=18% Similarity=0.104 Sum_probs=175.4
Q ss_pred cEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCc-cccCCCCCcEEEccCCcccc-cCCccccCCCCCCe
Q 047800 13 EYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPR-FIFNSSKLSILSLAKNSFSS-FIPNTFGNLRNLNE 90 (547)
Q Consensus 13 ~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~-~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~ 90 (547)
++++.++|+|+ .+|..+ .++|++|+|++|+|+ .+|. +|.++++|++|+|++|+|.+ +.+++|.++++|++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~-----~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~ 83 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLR-----VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHE 83 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCS-----EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCC-----CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhh
Confidence 67899999999 456655 368999999999999 7775 68899999999999999865 45568999999876
Q ss_pred -eeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccC-CcCCCCC
Q 047800 91 -LALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSS-NFLTGPL 168 (547)
Q Consensus 91 -L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~-N~l~~~~ 168 (547)
+.+++|+|+.++++ +|.++++|++|++++|+|+.+++..+.. .. ++..|++++ |.+....
T Consensus 84 ~l~~~~N~l~~l~~~-----~f~~l~~L~~L~l~~n~l~~~~~~~~~~-~~------------~l~~l~l~~~~~i~~l~ 145 (350)
T 4ay9_X 84 IRIEKANNLLYINPE-----AFQNLPNLQYLLISNTGIKHLPDVHKIH-SL------------QKVLLDIQDNINIHTIE 145 (350)
T ss_dssp EEEEEETTCCEECTT-----SBCCCTTCCEEEEEEECCSSCCCCTTCC-BS------------SCEEEEEESCTTCCEEC
T ss_pred hhcccCCcccccCch-----hhhhccccccccccccccccCCchhhcc-cc------------hhhhhhhcccccccccc
Confidence 66778999999988 8999999999999999999988766433 33 688999976 6788777
Q ss_pred CcCCCCCc-cccccccccccccCccccCCCCCcchhcCCCCCEEECcC-CcCCCCCCcchhCCCCCCeEeCCCCcccccc
Q 047800 169 PLEIGNLK-GLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSN-NNLSGAIPISLEKLSYLDDLDLSFNKLEGEI 246 (547)
Q Consensus 169 p~~~~~l~-~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~ 246 (547)
+..|..+. .++.|+|++|.|+ .+|.......+|+.|++++ |.++...+.+|..+++|+.||+++|+|+..+
T Consensus 146 ~~~f~~~~~~l~~L~L~~N~i~-------~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp 218 (350)
T 4ay9_X 146 RNSFVGLSFESVILWLNKNGIQ-------EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLP 218 (350)
T ss_dssp TTSSTTSBSSCEEEECCSSCCC-------EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCC
T ss_pred ccchhhcchhhhhhcccccccc-------CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccC
Confidence 77888875 6899999999995 4444444557899999985 7788666678999999999999999999766
Q ss_pred CCCCccCCcchhcccCcc
Q 047800 247 LRGGSFGNFLVELFEGNK 264 (547)
Q Consensus 247 ~~~~~~~~l~~l~l~~N~ 264 (547)
++ .+..+..+...++.
T Consensus 219 ~~--~~~~L~~L~~l~~~ 234 (350)
T 4ay9_X 219 SY--GLENLKKLRARSTY 234 (350)
T ss_dssp SS--SCTTCCEEECTTCT
T ss_pred hh--hhccchHhhhccCC
Confidence 54 35566665555443
No 342
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.88 E-value=1e-22 Score=200.72 Aligned_cols=187 Identities=23% Similarity=0.280 Sum_probs=109.1
Q ss_pred EEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCeeec
Q 047800 14 YLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRNLNELAL 93 (547)
Q Consensus 14 ~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 93 (547)
.+.++.+.+++. ..+..+++|+.|++++|.++ .+| .+..+++|++|+|++|+|+++.+ +..+++|++|+|
T Consensus 28 ~~~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~-----~~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l 97 (291)
T 1h6t_A 28 KDNLKKKSVTDA--VTQNELNSIDQIIANNSDIK-----SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFL 97 (291)
T ss_dssp HHHTTCSCTTSE--ECHHHHHTCCEEECTTSCCC-----CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred HHHhcCCCcccc--cchhhcCcccEEEccCCCcc-----cCh-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEEC
Confidence 344555555433 22345566666666666665 343 25556666666666666666433 666666666666
Q ss_pred cccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCCCCCCcCCC
Q 047800 94 HNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGPLPLEIG 173 (547)
Q Consensus 94 ~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~ 173 (547)
++|+|++++ .+..+++|++|+|++|+|+++. . +..++ +|++|++++|++++. ..+.
T Consensus 98 ~~n~l~~~~-------~l~~l~~L~~L~L~~n~i~~~~--~-l~~l~------------~L~~L~l~~n~l~~~--~~l~ 153 (291)
T 1h6t_A 98 DENKVKDLS-------SLKDLKKLKSLSLEHNGISDIN--G-LVHLP------------QLESLYLGNNKITDI--TVLS 153 (291)
T ss_dssp CSSCCCCGG-------GGTTCTTCCEEECTTSCCCCCG--G-GGGCT------------TCCEEECCSSCCCCC--GGGG
T ss_pred CCCcCCCCh-------hhccCCCCCEEECCCCcCCCCh--h-hcCCC------------CCCEEEccCCcCCcc--hhhc
Confidence 666666543 3556666666666666666541 1 33333 666666666666643 4566
Q ss_pred CCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCCcccc
Q 047800 174 NLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKLEG 244 (547)
Q Consensus 174 ~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 244 (547)
.+++|+.|++++|.++ +..| +..+++|+.|+|++|++++. + .+..+++|+.|++++|+++.
T Consensus 154 ~l~~L~~L~L~~N~l~------~~~~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 154 RLTKLDTLSLEDNQIS------DIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp GCTTCSEEECCSSCCC------CCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred cCCCCCEEEccCCccc------cchh--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 6666666666666663 2222 66666666666666666643 2 36666666666666666654
No 343
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.88 E-value=2.5e-22 Score=204.29 Aligned_cols=177 Identities=25% Similarity=0.225 Sum_probs=129.9
Q ss_pred CEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCcccc-CCCCCCeeeccccccccccCchhhHhhhcCCC
Q 047800 37 KHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFG-NLRNLNELALHNNYLTSSTLELSFLSLLLNCK 115 (547)
Q Consensus 37 ~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~ 115 (547)
+.+++++|+|+ .+|..+. ..++.|+|++|+|+++.+..|. ++++|++|+|++|+|+++++. .|.+++
T Consensus 21 ~~l~c~~~~l~-----~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~-----~~~~l~ 88 (361)
T 2xot_A 21 NILSCSKQQLP-----NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSE-----AFVPVP 88 (361)
T ss_dssp TEEECCSSCCS-----SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTT-----TTTTCT
T ss_pred CEEEeCCCCcC-----ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChh-----hccCCC
Confidence 56777777777 6676554 3477778888877777777776 777888888888888777766 677777
Q ss_pred CCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCCCCCCcCCCCCccccccccccccccCccccC
Q 047800 116 SLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQ 195 (547)
Q Consensus 116 ~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~ 195 (547)
+|++|+|++|+|+.+.+.. +.+++ +|+.|+|++|+|++..|..|.++++|+.|+|++|.++
T Consensus 89 ~L~~L~Ls~N~l~~~~~~~-~~~l~------------~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~------ 149 (361)
T 2xot_A 89 NLRYLDLSSNHLHTLDEFL-FSDLQ------------ALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS------ 149 (361)
T ss_dssp TCCEEECCSSCCCEECTTT-TTTCT------------TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC------
T ss_pred CCCEEECCCCcCCcCCHHH-hCCCc------------CCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC------
Confidence 8888888888877776655 44444 7888888888887777777888888888888888774
Q ss_pred CCCCcch---hcCCCCCEEECcCCcCCCCCCcchhCCCC--CCeEeCCCCcccc
Q 047800 196 GSIPESF---GDLSNNNTLNLSNNNLSGAIPISLEKLSY--LDDLDLSFNKLEG 244 (547)
Q Consensus 196 ~~~p~~~---~~l~~L~~L~l~~N~l~~~~~~~~~~l~~--L~~l~l~~N~l~~ 244 (547)
+..+..| ..+++|+.|+|++|+|++..+..+..++. ++.|+|++|++..
T Consensus 150 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 150 RFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp SCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred eeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccC
Confidence 3333344 56888889999999988776677887776 3778888888774
No 344
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.87 E-value=2.8e-22 Score=197.60 Aligned_cols=176 Identities=22% Similarity=0.318 Sum_probs=152.3
Q ss_pred cCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCC
Q 047800 6 IGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNL 85 (547)
Q Consensus 6 ~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 85 (547)
++.+++|+.|++++|.|+.+ + .+..+++|++|+|++|+|+ .++. +.++++|++|+|++|+|++ +| .+..+
T Consensus 42 ~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~-----~~~~-l~~l~~L~~L~l~~n~l~~-~~-~l~~l 111 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLT-----DIKP-LANLKNLGWLFLDENKVKD-LS-SLKDL 111 (291)
T ss_dssp HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCC-----CCGG-GTTCTTCCEEECCSSCCCC-GG-GGTTC
T ss_pred hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccC-----CCcc-cccCCCCCEEECCCCcCCC-Ch-hhccC
Confidence 45678999999999999865 3 4899999999999999999 5555 8899999999999999998 33 49999
Q ss_pred CCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCC
Q 047800 86 RNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLT 165 (547)
Q Consensus 86 ~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~ 165 (547)
++|++|+|++|+|++++ .+..+++|++|++++|+|+++ .. +..++ +|+.|++++|+++
T Consensus 112 ~~L~~L~L~~n~i~~~~-------~l~~l~~L~~L~l~~n~l~~~--~~-l~~l~------------~L~~L~L~~N~l~ 169 (291)
T 1h6t_A 112 KKLKSLSLEHNGISDIN-------GLVHLPQLESLYLGNNKITDI--TV-LSRLT------------KLDTLSLEDNQIS 169 (291)
T ss_dssp TTCCEEECTTSCCCCCG-------GGGGCTTCCEEECCSSCCCCC--GG-GGGCT------------TCSEEECCSSCCC
T ss_pred CCCCEEECCCCcCCCCh-------hhcCCCCCCEEEccCCcCCcc--hh-hccCC------------CCCEEEccCCccc
Confidence 99999999999999863 578899999999999999987 22 45555 9999999999999
Q ss_pred CCCCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCC
Q 047800 166 GPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIP 223 (547)
Q Consensus 166 ~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~ 223 (547)
+..| +..+++|+.|++++|.++ .+| .+..+++|+.|++++|+++....
T Consensus 170 ~~~~--l~~l~~L~~L~L~~N~i~-------~l~-~l~~l~~L~~L~l~~n~i~~~~~ 217 (291)
T 1h6t_A 170 DIVP--LAGLTKLQNLYLSKNHIS-------DLR-ALAGLKNLDVLELFSQECLNKPI 217 (291)
T ss_dssp CCGG--GTTCTTCCEEECCSSCCC-------BCG-GGTTCTTCSEEEEEEEEEECCCE
T ss_pred cchh--hcCCCccCEEECCCCcCC-------CCh-hhccCCCCCEEECcCCcccCCcc
Confidence 7655 899999999999999995 334 48999999999999999986433
No 345
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.87 E-value=1.7e-21 Score=183.79 Aligned_cols=127 Identities=17% Similarity=0.246 Sum_probs=64.8
Q ss_pred CEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCeeeccccccccccCchhhHhhhcCCCC
Q 047800 37 KHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRNLNELALHNNYLTSSTLELSFLSLLLNCKS 116 (547)
Q Consensus 37 ~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~ 116 (547)
+.+++++|.++ .+|..+. ++|+.|+|++|+|+++.+..|.++++|++|+|++|+|+++.+. .|.++++
T Consensus 14 ~~v~c~~~~l~-----~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~-----~~~~l~~ 81 (220)
T 2v9t_B 14 NIVDCRGKGLT-----EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPD-----AFQGLRS 81 (220)
T ss_dssp TEEECTTSCCS-----SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTT-----TTTTCSS
T ss_pred CEEEcCCCCcC-----cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHH-----HhhCCcC
Confidence 34555555555 4554433 4555555555555555555555555555555555555555444 4555555
Q ss_pred CcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCCCCCCcCCCCCccccccccccccc
Q 047800 117 LTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNF 188 (547)
Q Consensus 117 L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~ 188 (547)
|++|+|++|+|+.+++.. +..++ +|++|+|++|+|++..|..|.++++|+.|+|++|.+
T Consensus 82 L~~L~Ls~N~l~~l~~~~-f~~l~------------~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 140 (220)
T 2v9t_B 82 LNSLVLYGNKITELPKSL-FEGLF------------SLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKL 140 (220)
T ss_dssp CCEEECCSSCCCCCCTTT-TTTCT------------TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCEEECCCCcCCccCHhH-ccCCC------------CCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcC
Confidence 555555555555444433 22333 455555555555444444444444444444444444
No 346
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.86 E-value=2e-21 Score=183.30 Aligned_cols=152 Identities=22% Similarity=0.294 Sum_probs=135.7
Q ss_pred cEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCeee
Q 047800 13 EYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRNLNELA 92 (547)
Q Consensus 13 ~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 92 (547)
+.+++++|+++. +|..+. ++|+.|+|++|+|+ +..|..|.++++|+.|+|++|+|+++.|++|.++++|++|+
T Consensus 14 ~~v~c~~~~l~~-iP~~l~--~~l~~L~l~~n~i~----~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~ 86 (220)
T 2v9t_B 14 NIVDCRGKGLTE-IPTNLP--ETITEIRLEQNTIK----VIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLV 86 (220)
T ss_dssp TEEECTTSCCSS-CCSSCC--TTCCEEECCSSCCC----EECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEE
T ss_pred CEEEcCCCCcCc-CCCccC--cCCCEEECCCCcCC----CcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEE
Confidence 689999999995 555544 78999999999999 34455888999999999999999999999999999999999
Q ss_pred ccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCCCCCCcCC
Q 047800 93 LHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGPLPLEI 172 (547)
Q Consensus 93 L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~ 172 (547)
|++|+|+.+++. .|.++++|++|+|++|+|+++.+.. +.+++ +|++|+|++|+|++..+..|
T Consensus 87 Ls~N~l~~l~~~-----~f~~l~~L~~L~L~~N~l~~~~~~~-~~~l~------------~L~~L~L~~N~l~~~~~~~~ 148 (220)
T 2v9t_B 87 LYGNKITELPKS-----LFEGLFSLQLLLLNANKINCLRVDA-FQDLH------------NLNLLSLYDNKLQTIAKGTF 148 (220)
T ss_dssp CCSSCCCCCCTT-----TTTTCTTCCEEECCSSCCCCCCTTT-TTTCT------------TCCEEECCSSCCSCCCTTTT
T ss_pred CCCCcCCccCHh-----HccCCCCCCEEECCCCCCCEeCHHH-cCCCC------------CCCEEECCCCcCCEECHHHH
Confidence 999999999987 7999999999999999999998877 55666 99999999999998888889
Q ss_pred CCCcccccccccccccc
Q 047800 173 GNLKGLVGVDFSMNNFS 189 (547)
Q Consensus 173 ~~l~~L~~L~ls~N~~~ 189 (547)
..+++|+.|+|++|.+.
T Consensus 149 ~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 149 SPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp TTCTTCCEEECCSSCEE
T ss_pred hCCCCCCEEEeCCCCcC
Confidence 88999999999999885
No 347
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.86 E-value=3.2e-22 Score=215.96 Aligned_cols=189 Identities=23% Similarity=0.268 Sum_probs=97.9
Q ss_pred CcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCee
Q 047800 12 LEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRNLNEL 91 (547)
Q Consensus 12 L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 91 (547)
+..++|+.+.+..+.+ +..|++|+.|+|++|.|+ .+| .+..+++|+.|+|++|+|+++.| |..+++|+.|
T Consensus 23 l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~-----~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L 92 (605)
T 1m9s_A 23 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-----SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWL 92 (605)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCC-----CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEE
T ss_pred HHHHhccCCCcccccc--hhcCCCCCEEECcCCCCC-----CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEE
Confidence 3344455555543322 345555555555555555 333 34555555555555555555333 5555555555
Q ss_pred eccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCCCCCCcC
Q 047800 92 ALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGPLPLE 171 (547)
Q Consensus 92 ~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~~ 171 (547)
+|++|+|++++ .+..+++|+.|+|++|+|+++.. +..++ +|+.|+|++|.|++. ..
T Consensus 93 ~Ls~N~l~~l~-------~l~~l~~L~~L~Ls~N~l~~l~~---l~~l~------------~L~~L~Ls~N~l~~l--~~ 148 (605)
T 1m9s_A 93 FLDENKIKDLS-------SLKDLKKLKSLSLEHNGISDING---LVHLP------------QLESLYLGNNKITDI--TV 148 (605)
T ss_dssp ECCSSCCCCCT-------TSTTCTTCCEEECTTSCCCCCGG---GGGCT------------TCSEEECCSSCCCCC--GG
T ss_pred ECcCCCCCCCh-------hhccCCCCCEEEecCCCCCCCcc---ccCCC------------ccCEEECCCCccCCc--hh
Confidence 55555555433 34555555555555555554311 22222 555555555555543 34
Q ss_pred CCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCCcccc
Q 047800 172 IGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKLEG 244 (547)
Q Consensus 172 ~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 244 (547)
+..+++|+.|+|++|.++ +..| +..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++.+
T Consensus 149 l~~l~~L~~L~Ls~N~l~------~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 149 LSRLTKLDTLSLEDNQIS------DIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp GGSCTTCSEEECCSSCCC------CCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEEC
T ss_pred hcccCCCCEEECcCCcCC------Cchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcC
Confidence 555555555555555552 2222 55555555555555555543 235555555555555555554
No 348
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.86 E-value=2.3e-21 Score=182.80 Aligned_cols=152 Identities=24% Similarity=0.285 Sum_probs=81.1
Q ss_pred CEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCC-ccccCCCCCCeeeccccccccccCchhhHhhhcCCC
Q 047800 37 KHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIP-NTFGNLRNLNELALHNNYLTSSTLELSFLSLLLNCK 115 (547)
Q Consensus 37 ~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~ 115 (547)
+.+++++|.++ .+|..+. ..+++|+|++|+|+++.| ..|.++++|++|+|++|+|+++++. .|.+++
T Consensus 14 ~~l~~s~n~l~-----~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~-----~~~~l~ 81 (220)
T 2v70_A 14 TTVDCSNQKLN-----KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEG-----AFEGAS 81 (220)
T ss_dssp TEEECCSSCCS-----SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTT-----TTTTCT
T ss_pred CEeEeCCCCcc-----cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHH-----HhCCCC
Confidence 35666666665 4555443 234566666666666533 3456666666666666666665554 555566
Q ss_pred CCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCCCCCCcCCCCCccccccccccccccCccccC
Q 047800 116 SLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQ 195 (547)
Q Consensus 116 ~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~ 195 (547)
+|++|+|++|+|+++++.. +.+++ +|++|+|++|+|++..|..|.++++|+.|+|++|.+ +
T Consensus 82 ~L~~L~Ls~N~l~~~~~~~-~~~l~------------~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l------~ 142 (220)
T 2v70_A 82 GVNEILLTSNRLENVQHKM-FKGLE------------SLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQI------T 142 (220)
T ss_dssp TCCEEECCSSCCCCCCGGG-GTTCS------------SCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCC------C
T ss_pred CCCEEECCCCccCccCHhH-hcCCc------------CCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcC------C
Confidence 6666666666665555444 33333 555555555555554455555555555555544444 2
Q ss_pred CCCCcchhcCCCCCEEECcCCcCC
Q 047800 196 GSIPESFGDLSNNNTLNLSNNNLS 219 (547)
Q Consensus 196 ~~~p~~~~~l~~L~~L~l~~N~l~ 219 (547)
+..|+.|..+++|+.|+|++|.++
T Consensus 143 ~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 143 TVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp CBCTTTTTTCTTCCEEECCSCCEE
T ss_pred EECHHHhcCCCCCCEEEecCcCCc
Confidence 333444444444444444444443
No 349
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.86 E-value=7.1e-22 Score=186.37 Aligned_cols=157 Identities=22% Similarity=0.245 Sum_probs=140.1
Q ss_pred CcEEEccCCcccccCCccccCCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcch
Q 047800 64 LSILSLAKNSFSSFIPNTFGNLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSL 143 (547)
Q Consensus 64 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~ 143 (547)
-+.+++++|.++. +|..+. +.+++|+|++|+|+++++. ..|..+++|++|+|++|+|+++.+.. +.+++
T Consensus 13 ~~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~----~~~~~l~~L~~L~L~~N~i~~i~~~~-~~~l~--- 81 (220)
T 2v70_A 13 GTTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEAT----GIFKKLPQLRKINFSNNKITDIEEGA-FEGAS--- 81 (220)
T ss_dssp TTEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCC----CCGGGCTTCCEEECCSSCCCEECTTT-TTTCT---
T ss_pred CCEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCch----hhhccCCCCCEEECCCCcCCEECHHH-hCCCC---
Confidence 4699999999998 566553 4578999999999999653 16889999999999999999998876 55566
Q ss_pred hhhccccCCcccEEEccCCcCCCCCCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCC
Q 047800 144 EFFVMSYCNDILYLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIP 223 (547)
Q Consensus 144 ~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~ 223 (547)
+|++|+|++|+|++..+..|.++++|++|+|++|.+ ++..|+.|..+++|++|+|++|++++..|
T Consensus 82 ---------~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l------~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 146 (220)
T 2v70_A 82 ---------GVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRI------TCVGNDSFIGLSSVRLLSLYDNQITTVAP 146 (220)
T ss_dssp ---------TCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCC------CCBCTTSSTTCTTCSEEECTTSCCCCBCT
T ss_pred ---------CCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcC------CeECHhHcCCCccCCEEECCCCcCCEECH
Confidence 999999999999988888899999999999999999 56778999999999999999999999999
Q ss_pred cchhCCCCCCeEeCCCCcccccc
Q 047800 224 ISLEKLSYLDDLDLSFNKLEGEI 246 (547)
Q Consensus 224 ~~~~~l~~L~~l~l~~N~l~~~~ 246 (547)
..|..+++|+.|++++|++.+..
T Consensus 147 ~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 147 GAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp TTTTTCTTCCEEECCSCCEECSG
T ss_pred HHhcCCCCCCEEEecCcCCcCCC
Confidence 99999999999999999998653
No 350
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.86 E-value=8e-22 Score=200.54 Aligned_cols=176 Identities=24% Similarity=0.241 Sum_probs=150.2
Q ss_pred cEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCcccc-CCCCCcEEEccCCcccccCCccccCCCCCCee
Q 047800 13 EYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIF-NSSKLSILSLAKNSFSSFIPNTFGNLRNLNEL 91 (547)
Q Consensus 13 ~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 91 (547)
+.+++++|+|+. +|..+. +.++.|+|++|+|+ +..+..+. ++++|++|+|++|+|+++.+.+|.++++|++|
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~----~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L 93 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLS----RLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYL 93 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCC----EECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCC----ccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEE
Confidence 689999999995 555543 46899999999999 34455566 89999999999999999888999999999999
Q ss_pred eccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCCCCCCcC
Q 047800 92 ALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGPLPLE 171 (547)
Q Consensus 92 ~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~~ 171 (547)
+|++|+|+.+++. .|.++++|++|+|++|+|+.+.+.. +.+++ +|+.|+|++|+|++..+..
T Consensus 94 ~Ls~N~l~~~~~~-----~~~~l~~L~~L~L~~N~i~~~~~~~-~~~l~------------~L~~L~L~~N~l~~l~~~~ 155 (361)
T 2xot_A 94 DLSSNHLHTLDEF-----LFSDLQALEVLLLYNNHIVVVDRNA-FEDMA------------QLQKLYLSQNQISRFPVEL 155 (361)
T ss_dssp ECCSSCCCEECTT-----TTTTCTTCCEEECCSSCCCEECTTT-TTTCT------------TCCEEECCSSCCCSCCGGG
T ss_pred ECCCCcCCcCCHH-----HhCCCcCCCEEECCCCcccEECHHH-hCCcc------------cCCEEECCCCcCCeeCHHH
Confidence 9999999999887 8999999999999999999988776 55566 9999999999999766666
Q ss_pred C---CCCccccccccccccccCccccCCCCCcchhcCCC--CCEEECcCCcCC
Q 047800 172 I---GNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSN--NNTLNLSNNNLS 219 (547)
Q Consensus 172 ~---~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~--L~~L~l~~N~l~ 219 (547)
| .++++|+.|+|++|.|+ +..++.|..++. |+.|+|++|.+.
T Consensus 156 ~~~~~~l~~L~~L~L~~N~l~------~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 156 IKDGNKLPKLMLLDLSSNKLK------KLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp TC----CTTCCEEECCSSCCC------CCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred hcCcccCCcCCEEECCCCCCC------ccCHHHhhhccHhhcceEEecCCCcc
Confidence 6 67999999999999994 455577888887 489999999987
No 351
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.86 E-value=6.2e-23 Score=206.51 Aligned_cols=101 Identities=14% Similarity=0.171 Sum_probs=46.4
Q ss_pred CcEEEccCCccccCCChhhcCC--CCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCccccc-CCccccCCCCC
Q 047800 12 LEYLGFGHNKLVGVVPATIFNL--STLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSF-IPNTFGNLRNL 88 (547)
Q Consensus 12 L~~L~Ls~N~i~~~~~~~~~~l--~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L 88 (547)
++.|++++|.+. +..+..+ ++++.|++++|.++ +. +..++.+++|++|+|++|.+++. .|..+..+++|
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~----~~-~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L 120 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMD----QP-LAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKL 120 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEEC----SC-CCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCC
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCcccc----cc-chhhccCCCCCEEEccCCCcCHHHHHHHHhhCCCC
Confidence 444555554443 2334444 44555555555544 12 22233445555555555554433 44444445555
Q ss_pred CeeeccccccccccCchhhHhhhcCCCCCcEEeCcCC
Q 047800 89 NELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNN 125 (547)
Q Consensus 89 ~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N 125 (547)
++|+|++|.+++..+. .+..+++|++|+|++|
T Consensus 121 ~~L~L~~~~l~~~~~~-----~l~~~~~L~~L~L~~~ 152 (336)
T 2ast_B 121 QNLSLEGLRLSDPIVN-----TLAKNSNLVRLNLSGC 152 (336)
T ss_dssp SEEECTTCBCCHHHHH-----HHTTCTTCSEEECTTC
T ss_pred CEEeCcCcccCHHHHH-----HHhcCCCCCEEECCCC
Confidence 5555555544433322 3444455555555555
No 352
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.86 E-value=7.2e-23 Score=208.41 Aligned_cols=232 Identities=17% Similarity=0.173 Sum_probs=181.5
Q ss_pred EEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCC----ccccCCC-CCcEEEccCCcccccCCccccCC---
Q 047800 14 YLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIP----RFIFNSS-KLSILSLAKNSFSSFIPNTFGNL--- 85 (547)
Q Consensus 14 ~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l--- 85 (547)
.++|++|++++.+|..+...++|++|+|++|.|+ +..+ ..+.+++ +|++|+|++|+|++..+..|..+
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~----~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~ 77 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLY----SISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAA 77 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGG----GSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCC----hHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhc
Confidence 4789999999999888888888999999999999 2333 6777888 99999999999999888888775
Q ss_pred --CCCCeeeccccccccccCchhhHhhhcCC-CCCcEEeCcCCCCCCCCCcccccccCcchhhhcccc-CCcccEEEccC
Q 047800 86 --RNLNELALHNNYLTSSTLELSFLSLLLNC-KSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSY-CNDILYLDLSS 161 (547)
Q Consensus 86 --~~L~~L~L~~N~i~~~~~~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~-~~~L~~L~ls~ 161 (547)
++|++|+|++|+|++..+. .+...+..+ ++|++|+|++|+|+......+... +.. +.+|++|+|++
T Consensus 78 ~~~~L~~L~Ls~n~l~~~~~~-~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~---------l~~~~~~L~~L~Ls~ 147 (362)
T 3goz_A 78 IPANVTSLNLSGNFLSYKSSD-ELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQA---------FSNLPASITSLNLRG 147 (362)
T ss_dssp SCTTCCEEECCSSCGGGSCHH-HHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHH---------HTTSCTTCCEEECTT
T ss_pred cCCCccEEECcCCcCChHHHH-HHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHH---------HHhCCCceeEEEccC
Confidence 9999999999999987765 233446666 899999999999988776553221 112 24899999999
Q ss_pred CcCCCCCCcC----CCCCc-cccccccccccccCccccCCCCCcc----hhcC-CCCCEEECcCCcCCCC----CCcchh
Q 047800 162 NFLTGPLPLE----IGNLK-GLVGVDFSMNNFSGYNKLQGSIPES----FGDL-SNNNTLNLSNNNLSGA----IPISLE 227 (547)
Q Consensus 162 N~l~~~~p~~----~~~l~-~L~~L~ls~N~~~~~n~l~~~~p~~----~~~l-~~L~~L~l~~N~l~~~----~~~~~~ 227 (547)
|.++...+.. +..++ +|+.|+|++|.++ +..+.. +..+ ++|++|+|++|.++.. ++..+.
T Consensus 148 N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~------~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~ 221 (362)
T 3goz_A 148 NDLGIKSSDELIQILAAIPANVNSLNLRGNNLA------SKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFS 221 (362)
T ss_dssp SCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGG------GSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHhcCCccccEeeecCCCCc------hhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHh
Confidence 9998544433 34454 9999999999994 445544 4445 5999999999999863 444565
Q ss_pred C-CCCCCeEeCCCCccccccC-----CCCccCCcchhcccCccc
Q 047800 228 K-LSYLDDLDLSFNKLEGEIL-----RGGSFGNFLVELFEGNKL 265 (547)
Q Consensus 228 ~-l~~L~~l~l~~N~l~~~~~-----~~~~~~~l~~l~l~~N~~ 265 (547)
. .++|+.|++++|++++... ....+.+++.+++.+|.+
T Consensus 222 ~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l 265 (362)
T 3goz_A 222 SIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIV 265 (362)
T ss_dssp HSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHH
T ss_pred cCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCc
Confidence 5 4599999999999986433 114567899999999974
No 353
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.86 E-value=1.5e-21 Score=210.74 Aligned_cols=183 Identities=22% Similarity=0.308 Sum_probs=157.0
Q ss_pred cCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCC
Q 047800 6 IGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNL 85 (547)
Q Consensus 6 ~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 85 (547)
+..|++|+.|+|++|.|..+ + .|..+++|+.|+|++|+|+ .+|+ +..+++|+.|+|++|+|++ +| .|..+
T Consensus 39 ~~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~-----~~~~-l~~l~~L~~L~Ls~N~l~~-l~-~l~~l 108 (605)
T 1m9s_A 39 QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLT-----DIKP-LTNLKNLGWLFLDENKIKD-LS-SLKDL 108 (605)
T ss_dssp HHHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCC-----CCGG-GGGCTTCCEEECCSSCCCC-CT-TSTTC
T ss_pred hhcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCC-----CChh-hccCCCCCEEECcCCCCCC-Ch-hhccC
Confidence 45688999999999999864 3 5999999999999999999 4555 8899999999999999998 34 79999
Q ss_pred CCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCC
Q 047800 86 RNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLT 165 (547)
Q Consensus 86 ~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~ 165 (547)
++|++|+|++|+|++++ .+..+++|+.|+|++|+|+++ .. +..++ +|+.|+|++|.|+
T Consensus 109 ~~L~~L~Ls~N~l~~l~-------~l~~l~~L~~L~Ls~N~l~~l--~~-l~~l~------------~L~~L~Ls~N~l~ 166 (605)
T 1m9s_A 109 KKLKSLSLEHNGISDIN-------GLVHLPQLESLYLGNNKITDI--TV-LSRLT------------KLDTLSLEDNQIS 166 (605)
T ss_dssp TTCCEEECTTSCCCCCG-------GGGGCTTCSEEECCSSCCCCC--GG-GGSCT------------TCSEEECCSSCCC
T ss_pred CCCCEEEecCCCCCCCc-------cccCCCccCEEECCCCccCCc--hh-hcccC------------CCCEEECcCCcCC
Confidence 99999999999999863 588999999999999999987 22 45555 9999999999999
Q ss_pred CCCCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCC
Q 047800 166 GPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLS 230 (547)
Q Consensus 166 ~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~ 230 (547)
+..| +..+++|+.|+|++|.++ + + ..+..+++|+.|+|++|++++.+...+..+.
T Consensus 167 ~~~~--l~~l~~L~~L~Ls~N~i~------~-l-~~l~~l~~L~~L~L~~N~l~~~p~~~~~~l~ 221 (605)
T 1m9s_A 167 DIVP--LAGLTKLQNLYLSKNHIS------D-L-RALAGLKNLDVLELFSQECLNKPINHQSNLV 221 (605)
T ss_dssp CCGG--GTTCTTCCEEECCSSCCC------B-C-GGGTTCTTCSEEECCSEEEECCCCCCCSSCE
T ss_pred Cchh--hccCCCCCEEECcCCCCC------C-C-hHHccCCCCCEEEccCCcCcCCcccccccEE
Confidence 7766 999999999999999995 2 3 4689999999999999999876544444433
No 354
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.85 E-value=3.3e-21 Score=205.84 Aligned_cols=175 Identities=26% Similarity=0.315 Sum_probs=148.9
Q ss_pred CCcccCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCcc
Q 047800 2 IPPEIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNT 81 (547)
Q Consensus 2 ip~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 81 (547)
||..+ +++|+.|+|++|+|+ .+| ..+++|++|+|++|+|+ .+|. +.+ +|+.|+|++|+|++ +|.
T Consensus 74 lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~-----~ip~-l~~--~L~~L~Ls~N~l~~-lp~- 137 (571)
T 3cvr_A 74 LPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLS-----TLPE-LPA--SLKHLDVDNNQLTM-LPE- 137 (571)
T ss_dssp CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCS-----CCCC-CCT--TCCEEECCSSCCSC-CCC-
T ss_pred cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCC-----Ccch-hhc--CCCEEECCCCcCCC-CCC-
Confidence 56655 378999999999999 455 56899999999999999 5888 665 99999999999999 555
Q ss_pred ccCCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccC
Q 047800 82 FGNLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSS 161 (547)
Q Consensus 82 ~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~ 161 (547)
.+++|++|+|++|+|++++. .+++|++|+|++|+|++++. |. + +|++|+|++
T Consensus 138 --~l~~L~~L~Ls~N~l~~lp~---------~l~~L~~L~Ls~N~L~~lp~--l~---~------------~L~~L~Ls~ 189 (571)
T 3cvr_A 138 --LPALLEYINADNNQLTMLPE---------LPTSLEVLSVRNNQLTFLPE--LP---E------------SLEALDVST 189 (571)
T ss_dssp --CCTTCCEEECCSSCCSCCCC---------CCTTCCEEECCSSCCSCCCC--CC---T------------TCCEEECCS
T ss_pred --cCccccEEeCCCCccCcCCC---------cCCCcCEEECCCCCCCCcch--hh---C------------CCCEEECcC
Confidence 68999999999999998764 46899999999999999665 33 4 899999999
Q ss_pred CcCCCCCCcCCCCCccc-------cccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCC
Q 047800 162 NFLTGPLPLEIGNLKGL-------VGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSY 231 (547)
Q Consensus 162 N~l~~~~p~~~~~l~~L-------~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 231 (547)
|+|+ .+|. |.. +| +.|+|++|.|+ .+|..+..+++|+.|+|++|++++.+|..+..+..
T Consensus 190 N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-------~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 190 NLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-------HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp SCCS-SCCC-CC----------CCEEEECCSSCCC-------CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred CCCC-chhh-HHH--hhhcccccceEEecCCCcce-------ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 9999 5666 665 77 99999999996 68888888999999999999999999988877643
No 355
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.85 E-value=4.2e-24 Score=224.66 Aligned_cols=249 Identities=16% Similarity=0.124 Sum_probs=139.5
Q ss_pred CCcEEEccCCcccc----CCChhhcCCCCCCEEEcccccCCCCCCCCCCccc-cCCCCCcEEEccCCcccccC----Ccc
Q 047800 11 NLEYLGFGHNKLVG----VVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFI-FNSSKLSILSLAKNSFSSFI----PNT 81 (547)
Q Consensus 11 ~L~~L~Ls~N~i~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~----~~~ 81 (547)
+|++|+|++|+|+. .++..|..+++|++|+|++|.+++.....+...+ ...++|++|+|++|+|++.. +..
T Consensus 86 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 165 (461)
T 1z7x_W 86 KIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASV 165 (461)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred ceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHH
Confidence 68888888888773 4577778888888888888877621111111121 12456777777777777633 455
Q ss_pred ccCCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCC----CcccccccC--------c-chh----
Q 047800 82 FGNLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGIL----HRTYMGNLS--------H-SLE---- 144 (547)
Q Consensus 82 ~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~----~~~~~~~l~--------~-~~~---- 144 (547)
+..+++|++|+|++|.++...............++|++|+|++|+++... +.. +..++ . .+.
T Consensus 166 l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~-l~~~~~L~~L~Ls~n~l~~~~~ 244 (461)
T 1z7x_W 166 LRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGI-VASKASLRELALGSNKLGDVGM 244 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHH-HHHCTTCCEEECCSSBCHHHHH
T ss_pred HhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHH-HHhCCCccEEeccCCcCChHHH
Confidence 66677777777777777654433100001113456777777777666531 111 11111 0 000
Q ss_pred ----hhccccCCcccEEEccCCcCCCC----CCcCCCCCccccccccccccccCccccCCCCCcchhc-----CCCCCEE
Q 047800 145 ----FFVMSYCNDILYLDLSSNFLTGP----LPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGD-----LSNNNTL 211 (547)
Q Consensus 145 ----~~~~~~~~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~-----l~~L~~L 211 (547)
...+..+++|++|++++|.++.. ++..+.++++|+.|++++|.++ +..+..+.. .++|+.|
T Consensus 245 ~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~------~~~~~~l~~~l~~~~~~L~~L 318 (461)
T 1z7x_W 245 AELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELG------DEGARLLCETLLEPGCQLESL 318 (461)
T ss_dssp HHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCH------HHHHHHHHHHHTSTTCCCCEE
T ss_pred HHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCc------hHHHHHHHHHhccCCccceee
Confidence 01122355777777777777643 4555666777777777777763 122222222 2466666
Q ss_pred ECcCCcCCCC----CCcchhCCCCCCeEeCCCCccccccCCC------CccCCcchhcccCcccc
Q 047800 212 NLSNNNLSGA----IPISLEKLSYLDDLDLSFNKLEGEILRG------GSFGNFLVELFEGNKLL 266 (547)
Q Consensus 212 ~l~~N~l~~~----~~~~~~~l~~L~~l~l~~N~l~~~~~~~------~~~~~l~~l~l~~N~~~ 266 (547)
+|++|.+++. ++..+..+++|+.|++++|.+.+..+.. ....+++.+++.+|.+.
T Consensus 319 ~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~ 383 (461)
T 1z7x_W 319 WVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVS 383 (461)
T ss_dssp ECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCC
T ss_pred EcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCC
Confidence 7766666644 3445566677777777777766432211 01346666677766553
No 356
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.85 E-value=1.1e-20 Score=179.44 Aligned_cols=152 Identities=23% Similarity=0.278 Sum_probs=79.0
Q ss_pred CEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCeeeccccccccccCchhhHhhhcCCCC
Q 047800 37 KHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRNLNELALHNNYLTSSTLELSFLSLLLNCKS 116 (547)
Q Consensus 37 ~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~ 116 (547)
+.++.++|.++ .+|..+. ++|++|+|++|+|+++.|..|.++++|++|+|++|+|+.+++. .|.++++
T Consensus 22 ~~v~c~~~~l~-----~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~-----~~~~l~~ 89 (229)
T 3e6j_A 22 TTVDCRSKRHA-----SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVG-----VFDSLTQ 89 (229)
T ss_dssp TEEECTTSCCS-----SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT-----TTTTCTT
T ss_pred CEeEccCCCcC-----ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChh-----hcccCCC
Confidence 44555555555 4444332 4555555555555554455555555555555555555554443 3444444
Q ss_pred CcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCCCCCCcCCCCCccccccccccccccCccccCC
Q 047800 117 LTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQG 196 (547)
Q Consensus 117 L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~ 196 (547)
|++|+|++|+|+++ .+..|..+++|+.|+|++|.++
T Consensus 90 L~~L~Ls~N~l~~l-------------------------------------~~~~~~~l~~L~~L~Ls~N~l~------- 125 (229)
T 3e6j_A 90 LTVLDLGTNQLTVL-------------------------------------PSAVFDRLVHLKELFMCCNKLT------- 125 (229)
T ss_dssp CCEEECCSSCCCCC-------------------------------------CTTTTTTCTTCCEEECCSSCCC-------
T ss_pred cCEEECCCCcCCcc-------------------------------------ChhHhCcchhhCeEeccCCccc-------
Confidence 44444444444443 3334444444555555555442
Q ss_pred CCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCCcccc
Q 047800 197 SIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKLEG 244 (547)
Q Consensus 197 ~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 244 (547)
.+|..+..+++|+.|+|++|+|++..+..|..+++|+.|++++|++.+
T Consensus 126 ~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 126 ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 344455555556666666666655555555666666666666666554
No 357
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.85 E-value=1.5e-22 Score=203.77 Aligned_cols=235 Identities=19% Similarity=0.168 Sum_probs=180.6
Q ss_pred cCCC--CCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCC-CCccccCCCCCcEEEccCCcccccCCccc
Q 047800 6 IGNL--HNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGT-IPRFIFNSSKLSILSLAKNSFSSFIPNTF 82 (547)
Q Consensus 6 ~~~l--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 82 (547)
+..+ ++++.|++++|.+.+..+. +..+++|++|+|++|.++ +. +|..+..+++|++|+|++|++++..+..|
T Consensus 64 ~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~----~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l 138 (336)
T 2ast_B 64 TGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIE----VSTLHGILSQCSKLQNLSLEGLRLSDPIVNTL 138 (336)
T ss_dssp HHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEEC----HHHHHHHHTTBCCCSEEECTTCBCCHHHHHHH
T ss_pred HHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcC----HHHHHHHHhhCCCCCEEeCcCcccCHHHHHHH
Confidence 3444 8899999999999977665 567999999999999998 34 78888899999999999999998889999
Q ss_pred cCCCCCCeeecccc-ccccccCchhhHhhhcCCCCCcEEeCcCC-CCCCCCCcccccccCcchhhhccccCC-cccEEEc
Q 047800 83 GNLRNLNELALHNN-YLTSSTLELSFLSLLLNCKSLTHIGLSNN-PLDGILHRTYMGNLSHSLEFFVMSYCN-DILYLDL 159 (547)
Q Consensus 83 ~~l~~L~~L~L~~N-~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N-~l~~~~~~~~~~~l~~~~~~~~~~~~~-~L~~L~l 159 (547)
+.+++|++|+|++| .+++... ...+.++++|++|+|++| .++...... .+..++ +|++|++
T Consensus 139 ~~~~~L~~L~L~~~~~l~~~~l----~~~~~~~~~L~~L~l~~~~~l~~~~~~~------------~~~~l~~~L~~L~l 202 (336)
T 2ast_B 139 AKNSNLVRLNLSGCSGFSEFAL----QTLLSSCSRLDELNLSWCFDFTEKHVQV------------AVAHVSETITQLNL 202 (336)
T ss_dssp TTCTTCSEEECTTCBSCCHHHH----HHHHHHCTTCCEEECCCCTTCCHHHHHH------------HHHHSCTTCCEEEC
T ss_pred hcCCCCCEEECCCCCCCCHHHH----HHHHhcCCCCCEEcCCCCCCcChHHHHH------------HHHhcccCCCEEEe
Confidence 99999999999999 6765211 125778999999999999 887531111 133456 8999999
Q ss_pred cCC--cCC-CCCCcCCCCCcccccccccccc-ccCccccCCCCCcchhcCCCCCEEECcCCc-CCCCCCcchhCCCCCCe
Q 047800 160 SSN--FLT-GPLPLEIGNLKGLVGVDFSMNN-FSGYNKLQGSIPESFGDLSNNNTLNLSNNN-LSGAIPISLEKLSYLDD 234 (547)
Q Consensus 160 s~N--~l~-~~~p~~~~~l~~L~~L~ls~N~-~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~~~~~~~l~~L~~ 234 (547)
++| .++ +.+|..+.++++|+.|++++|. + ++..+..+..+++|+.|++++|. +.......+..+++|+.
T Consensus 203 ~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l------~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~ 276 (336)
T 2ast_B 203 SGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVML------KNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKT 276 (336)
T ss_dssp CSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTC------CGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCE
T ss_pred CCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcC------CHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCE
Confidence 999 455 4556777889999999999998 5 45667788999999999999996 32222236888999999
Q ss_pred EeCCCCccccccCCCCcc-CCcchhcccCccccccCC
Q 047800 235 LDLSFNKLEGEILRGGSF-GNFLVELFEGNKLLYGSP 270 (547)
Q Consensus 235 l~l~~N~l~~~~~~~~~~-~~l~~l~l~~N~~~c~~~ 270 (547)
|++++| ++... ...+ ..+..+.+.+|.+....+
T Consensus 277 L~l~~~-i~~~~--~~~l~~~l~~L~l~~n~l~~~~~ 310 (336)
T 2ast_B 277 LQVFGI-VPDGT--LQLLKEALPHLQINCSHFTTIAR 310 (336)
T ss_dssp EECTTS-SCTTC--HHHHHHHSTTSEESCCCSCCTTC
T ss_pred EeccCc-cCHHH--HHHHHhhCcceEEecccCccccC
Confidence 999999 33211 0222 236677788887754433
No 358
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.85 E-value=1.7e-20 Score=178.01 Aligned_cols=153 Identities=18% Similarity=0.166 Sum_probs=125.4
Q ss_pred CCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCCCC
Q 047800 88 LNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGP 167 (547)
Q Consensus 88 L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~~ 167 (547)
.+.++.++|.++.+|.. + .++|++|+|++|+|+++.+.. +.+++ +|++|+|++|+|+..
T Consensus 21 ~~~v~c~~~~l~~ip~~------~--~~~L~~L~Ls~n~i~~~~~~~-~~~l~------------~L~~L~L~~N~l~~i 79 (229)
T 3e6j_A 21 GTTVDCRSKRHASVPAG------I--PTNAQILYLHDNQITKLEPGV-FDSLI------------NLKELYLGSNQLGAL 79 (229)
T ss_dssp TTEEECTTSCCSSCCSC------C--CTTCSEEECCSSCCCCCCTTT-TTTCT------------TCCEEECCSSCCCCC
T ss_pred CCEeEccCCCcCccCCC------C--CCCCCEEEcCCCccCccCHHH-hhCcc------------CCcEEECCCCCCCCc
Confidence 45677777777766654 1 267777888888877776665 45555 788888888888877
Q ss_pred CCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCCccccccC
Q 047800 168 LPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKLEGEIL 247 (547)
Q Consensus 168 ~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 247 (547)
.+..|.++++|+.|+|++|.+ ++..+..|..+++|++|+|++|+|+ .+|..+..+++|+.|++++|++++.++
T Consensus 80 ~~~~~~~l~~L~~L~Ls~N~l------~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~ 152 (229)
T 3e6j_A 80 PVGVFDSLTQLTVLDLGTNQL------TVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPH 152 (229)
T ss_dssp CTTTTTTCTTCCEEECCSSCC------CCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCT
T ss_pred ChhhcccCCCcCEEECCCCcC------CccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCH
Confidence 677788999999999999998 5566778999999999999999999 678889999999999999999998776
Q ss_pred CC-CccCCcchhcccCcccccc
Q 047800 248 RG-GSFGNFLVELFEGNKLLYG 268 (547)
Q Consensus 248 ~~-~~~~~l~~l~l~~N~~~c~ 268 (547)
.. ..+.++..+++.+|++.|.
T Consensus 153 ~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 153 GAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp TTTTTCTTCCEEECTTSCBCTT
T ss_pred HHHhCCCCCCEEEeeCCCccCC
Confidence 54 6688999999999999875
No 359
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.84 E-value=2.2e-23 Score=219.22 Aligned_cols=122 Identities=21% Similarity=0.241 Sum_probs=79.1
Q ss_pred cCCCCCCcEEEccCCcccc----CCChhhcCCCCCCEEEcccccCCCCCCCCCCcccc-CCC----CCcEEEccCCcccc
Q 047800 6 IGNLHNLEYLGFGHNKLVG----VVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIF-NSS----KLSILSLAKNSFSS 76 (547)
Q Consensus 6 ~~~l~~L~~L~Ls~N~i~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~-~l~----~L~~L~Ls~N~l~~ 76 (547)
|..+++|++|+|++|+|+. .++..+..+++|++|+|++|.|+ ...+..+. .++ +|++|+|++|+|+.
T Consensus 24 ~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~----~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~ 99 (461)
T 1z7x_W 24 LPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELG----DVGVHCVLQGLQTPSCKIQKLSLQNCCLTG 99 (461)
T ss_dssp HHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCH----HHHHHHHHHTTCSTTCCCCEEECTTSCCBG
T ss_pred HhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCC----hHHHHHHHHHHhhCCCceeEEEccCCCCCH
Confidence 5567778888888888764 34566777788888888888776 22232222 333 68888888888774
Q ss_pred ----cCCccccCCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCC
Q 047800 77 ----FIPNTFGNLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGIL 131 (547)
Q Consensus 77 ----~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 131 (547)
.++..|..+++|++|+|++|.|+...........+...++|++|+|++|+++...
T Consensus 100 ~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~ 158 (461)
T 1z7x_W 100 AGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAAS 158 (461)
T ss_dssp GGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGG
T ss_pred HHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHH
Confidence 3577777788888888888877654433111112333567777777777776543
No 360
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.84 E-value=1.1e-21 Score=190.30 Aligned_cols=171 Identities=21% Similarity=0.263 Sum_probs=125.4
Q ss_pred CCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCC
Q 047800 8 NLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRN 87 (547)
Q Consensus 8 ~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 87 (547)
++.+++.++|++|.++++. .+..+++|++|++++|+|+ .+| .+..+++|++|+|++|+|+++.+ |.++++
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-----~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~ 86 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-----SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTK 86 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-----CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSS
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-----cch-HHhhCCCCCEEECCCCccCCChh--hccCCC
Confidence 4566777888888887544 6788888888888888888 666 67788888888888888888544 888888
Q ss_pred CCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCCCC
Q 047800 88 LNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGP 167 (547)
Q Consensus 88 L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~~ 167 (547)
|++|+|++|+|++++.. .. ++|++|+|++|+|+++.. +..++ +|+.|++++|+|++.
T Consensus 87 L~~L~L~~N~l~~l~~~-------~~-~~L~~L~L~~N~l~~~~~---l~~l~------------~L~~L~Ls~N~i~~~ 143 (263)
T 1xeu_A 87 LEELSVNRNRLKNLNGI-------PS-ACLSRLFLDNNELRDTDS---LIHLK------------NLEILSIRNNKLKSI 143 (263)
T ss_dssp CCEEECCSSCCSCCTTC-------CC-SSCCEEECCSSCCSBSGG---GTTCT------------TCCEEECTTSCCCBC
T ss_pred CCEEECCCCccCCcCcc-------cc-CcccEEEccCCccCCChh---hcCcc------------cccEEECCCCcCCCC
Confidence 88888888888876642 22 778888888888876521 33444 788888888888754
Q ss_pred CCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCC
Q 047800 168 LPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGA 221 (547)
Q Consensus 168 ~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 221 (547)
+ .+..+++|+.|++++|.++ +. ..+..+++|+.|++++|+++..
T Consensus 144 -~-~l~~l~~L~~L~L~~N~i~------~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 144 -V-MLGFLSKLEVLDLHGNEIT------NT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp -G-GGGGCTTCCEEECTTSCCC------BC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred -h-HHccCCCCCEEECCCCcCc------ch--HHhccCCCCCEEeCCCCcccCC
Confidence 3 5677777777777777774 22 5566777777777777777644
No 361
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.84 E-value=1.7e-23 Score=224.55 Aligned_cols=190 Identities=21% Similarity=0.172 Sum_probs=134.8
Q ss_pred cCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCc-------------ccccCCccccCCCCCCeee-cccc
Q 047800 31 FNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNS-------------FSSFIPNTFGNLRNLNELA-LHNN 96 (547)
Q Consensus 31 ~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~-------------l~~~~~~~~~~l~~L~~L~-L~~N 96 (547)
..+++|+.|+|++|+|+ .+|+.++++++|+.|++++|. +.+..|..++++++|+.|+ ++.|
T Consensus 346 ~~~~~L~~L~Ls~n~L~-----~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n 420 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-----VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAA 420 (567)
T ss_dssp STTTTSSSCCCCHHHHH-----HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHH
T ss_pred ccCccceeccCChhhHH-----hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhc
Confidence 34555555555555555 555555555555555554443 4455566666666666666 5555
Q ss_pred ccccccCchhhHhhhc--CCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCCCCCCcCCCC
Q 047800 97 YLTSSTLELSFLSLLL--NCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGPLPLEIGN 174 (547)
Q Consensus 97 ~i~~~~~~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~ 174 (547)
.+..+..-......+. ....|+.|+|++|+|++++. +++++ +|+.|+|++|+|+ .+|..|++
T Consensus 421 ~~~~L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~lp~---~~~l~------------~L~~L~Ls~N~l~-~lp~~~~~ 484 (567)
T 1dce_A 421 YLDDLRSKFLLENSVLKMEYADVRVLHLAHKDLTVLCH---LEQLL------------LVTHLDLSHNRLR-ALPPALAA 484 (567)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCSEEECTTSCCSSCCC---GGGGT------------TCCEEECCSSCCC-CCCGGGGG
T ss_pred ccchhhhhhhhcccccccCccCceEEEecCCCCCCCcC---ccccc------------cCcEeecCccccc-ccchhhhc
Confidence 4433321100000000 01359999999999998753 55566 8999999999999 77889999
Q ss_pred CccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCC-CcchhCCCCCCeEeCCCCccccccCCC
Q 047800 175 LKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAI-PISLEKLSYLDDLDLSFNKLEGEILRG 249 (547)
Q Consensus 175 l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~l~~L~~l~l~~N~l~~~~~~~ 249 (547)
+++|+.|+|++|.++ .+| .|+.+++|+.|+|++|+|++.. |..|..+++|+.|+|++|++++.++..
T Consensus 485 l~~L~~L~Ls~N~l~-------~lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~ 552 (567)
T 1dce_A 485 LRCLEVLQASDNALE-------NVD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQ 552 (567)
T ss_dssp CTTCCEEECCSSCCC-------CCG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCT
T ss_pred CCCCCEEECCCCCCC-------CCc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHH
Confidence 999999999999995 366 8999999999999999999887 899999999999999999999876654
No 362
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.83 E-value=2.4e-21 Score=187.93 Aligned_cols=172 Identities=22% Similarity=0.214 Sum_probs=149.7
Q ss_pred CCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCeeeccccccccccCchhhHhhh
Q 047800 32 NLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRNLNELALHNNYLTSSTLELSFLSLL 111 (547)
Q Consensus 32 ~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~ 111 (547)
.+.++..+++++|.++ .++ .+..+++|+.|++++|.|+. +| .+..+++|++|+|++|+|+++++ |
T Consensus 17 ~l~~l~~l~l~~~~i~-----~~~-~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~-------l 81 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVT-----DLV-SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP-------L 81 (263)
T ss_dssp HHHHHHHHHHTCSCTT-----SEE-CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG-------G
T ss_pred HHHHHHHHHhcCCCcc-----ccc-chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh-------h
Confidence 4667888899999998 566 67789999999999999998 45 78999999999999999998763 7
Q ss_pred cCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCCCCCCcCCCCCccccccccccccccCc
Q 047800 112 LNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSGY 191 (547)
Q Consensus 112 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~ 191 (547)
.++++|++|+|++|+|+++..-. . . +|++|+|++|+|++. ..+.++++|+.|++++|+++
T Consensus 82 ~~l~~L~~L~L~~N~l~~l~~~~---~-~------------~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~-- 141 (263)
T 1xeu_A 82 KDLTKLEELSVNRNRLKNLNGIP---S-A------------CLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLK-- 141 (263)
T ss_dssp TTCSSCCEEECCSSCCSCCTTCC---C-S------------SCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCC--
T ss_pred ccCCCCCEEECCCCccCCcCccc---c-C------------cccEEEccCCccCCC--hhhcCcccccEEECCCCcCC--
Confidence 78999999999999999876532 1 4 899999999999964 35899999999999999995
Q ss_pred cccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCCcccccc
Q 047800 192 NKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKLEGEI 246 (547)
Q Consensus 192 n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~ 246 (547)
.++ .+..+++|+.|+|++|++++. ..+..+++|+.|++++|+++..+
T Consensus 142 -----~~~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~~ 188 (263)
T 1xeu_A 142 -----SIV-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNEP 188 (263)
T ss_dssp -----BCG-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECCC
T ss_pred -----CCh-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCCc
Confidence 233 789999999999999999976 67899999999999999998653
No 363
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.82 E-value=2.9e-20 Score=172.17 Aligned_cols=153 Identities=19% Similarity=0.249 Sum_probs=70.3
Q ss_pred cCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCeeeccccccccccCchhhHhh
Q 047800 31 FNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRNLNELALHNNYLTSSTLELSFLSL 110 (547)
Q Consensus 31 ~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~ 110 (547)
+.+++|++|++++|.|+ .+| .+..+++|++|++++|.++. +..+..+++|++|++++|++++..+. .
T Consensus 41 ~~l~~L~~L~l~~n~i~-----~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~-----~ 107 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-----DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIP-----N 107 (197)
T ss_dssp HHHHTCCEEEEESSCCS-----CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSC-----C
T ss_pred hhcCCccEEeccCCCcc-----ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccCh-----h
Confidence 33444555555555544 334 34444555555555554433 22444455555555555555443333 3
Q ss_pred hcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCc-CCCCCCcCCCCCcccccccccccccc
Q 047800 111 LLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNF-LTGPLPLEIGNLKGLVGVDFSMNNFS 189 (547)
Q Consensus 111 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~-l~~~~p~~~~~l~~L~~L~ls~N~~~ 189 (547)
|..+++|++|+|++|++++..+.. +..++ +|++|++++|. ++ .+| .+..+++|+.|++++|.++
T Consensus 108 l~~l~~L~~L~Ls~n~i~~~~~~~-l~~l~------------~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~ 172 (197)
T 4ezg_A 108 LSGLTSLTLLDISHSAHDDSILTK-INTLP------------KVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVH 172 (197)
T ss_dssp CTTCTTCCEEECCSSBCBGGGHHH-HTTCS------------SCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCC
T ss_pred hcCCCCCCEEEecCCccCcHhHHH-HhhCC------------CCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCc
Confidence 444555555555555554433222 22222 45555555554 33 222 3455555555555555552
Q ss_pred CccccCCCCCcchhcCCCCCEEECcCCcCC
Q 047800 190 GYNKLQGSIPESFGDLSNNNTLNLSNNNLS 219 (547)
Q Consensus 190 ~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~ 219 (547)
.++ .+..+++|+.|++++|++.
T Consensus 173 -------~~~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 173 -------DYR-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp -------CCT-TGGGCSSCCEEEECBC---
T ss_pred -------ChH-HhccCCCCCEEEeeCcccC
Confidence 122 4555555666666666554
No 364
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.81 E-value=5.7e-20 Score=170.18 Aligned_cols=153 Identities=16% Similarity=0.241 Sum_probs=97.9
Q ss_pred cCCCCCcEEEccCCcccccCCccccCCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccc
Q 047800 59 FNSSKLSILSLAKNSFSSFIPNTFGNLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGN 138 (547)
Q Consensus 59 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 138 (547)
..+++|+.|++++|.|+. +| .+..+++|++|++++|.++.++ .+..+++|++|++++|++++..+.. +..
T Consensus 41 ~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l~~n~~~~~~-------~l~~l~~L~~L~l~~n~l~~~~~~~-l~~ 110 (197)
T 4ezg_A 41 AQMNSLTYITLANINVTD-LT-GIEYAHNIKDLTINNIHATNYN-------PISGLSNLERLRIMGKDVTSDKIPN-LSG 110 (197)
T ss_dssp HHHHTCCEEEEESSCCSC-CT-TGGGCTTCSEEEEESCCCSCCG-------GGTTCTTCCEEEEECTTCBGGGSCC-CTT
T ss_pred hhcCCccEEeccCCCccC-hH-HHhcCCCCCEEEccCCCCCcch-------hhhcCCCCCEEEeECCccCcccChh-hcC
Confidence 455667777777777775 34 5667777777777777665443 4666777777777777776544433 333
Q ss_pred cCcchhhhccccCCcccEEEccCCcCCCCCCcCCCCCcccccccccccc-ccCccccCCCCCcchhcCCCCCEEECcCCc
Q 047800 139 LSHSLEFFVMSYCNDILYLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNN-FSGYNKLQGSIPESFGDLSNNNTLNLSNNN 217 (547)
Q Consensus 139 l~~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~-~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~ 217 (547)
++ +|++|++++|++++..|..++.+++|+.|++++|. ++ .+| .+..+++|+.|++++|+
T Consensus 111 l~------------~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-------~~~-~l~~l~~L~~L~l~~n~ 170 (197)
T 4ezg_A 111 LT------------SLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-------DIM-PLKTLPELKSLNIQFDG 170 (197)
T ss_dssp CT------------TCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-------CCG-GGGGCSSCCEEECTTBC
T ss_pred CC------------CCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-------ccH-hhcCCCCCCEEECCCCC
Confidence 44 67777777777776566667777777777777776 42 333 56677777777777777
Q ss_pred CCCCCCcchhCCCCCCeEeCCCCccc
Q 047800 218 LSGAIPISLEKLSYLDDLDLSFNKLE 243 (547)
Q Consensus 218 l~~~~~~~~~~l~~L~~l~l~~N~l~ 243 (547)
+++. + .+..+++|+.|++++|++.
T Consensus 171 i~~~-~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 171 VHDY-R-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp CCCC-T-TGGGCSSCCEEEECBC---
T ss_pred CcCh-H-HhccCCCCCEEEeeCcccC
Confidence 7643 2 5666777777777777665
No 365
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.80 E-value=4.8e-21 Score=204.41 Aligned_cols=144 Identities=17% Similarity=0.153 Sum_probs=121.1
Q ss_pred HHHHHH-HHHHHHhhcCCCCCCCCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHH
Q 047800 296 FMIVVI-LLILRCRKRGKRPSNDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEY 374 (547)
Q Consensus 296 ~~~~~~-~~~~~~~~~~~~~~~H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~ 374 (547)
+..|+. +..++ ||||+++..++......++||||+++|+|.+++.. +..++.|++.||+|
T Consensus 386 ~~~E~~il~~l~----------h~nIv~~~~~~~~~~~~~lVmE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~ 446 (540)
T 3en9_A 386 TAREARYLALVK----------DFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIED---------NLDIAYKIGEIVGK 446 (540)
T ss_dssp HHHHHHHHHHGG----------GGTCCCCCEEEEETTTTEEEEECCCSEEHHHHSTT---------CTHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcC----------CCCcCceEEEEEeCCccEEEEECCCCCCHHHHHHH---------HHHHHHHHHHHHHH
Confidence 455555 66666 99999777777677778999999999999999976 56899999999999
Q ss_pred HHccCCCCccccCCCCCcEEeCCCCcEEEcccCCcccCCCCCcc-------cccccCCCCCCCCCCCCC--CCCCcchhH
Q 047800 375 MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMT-------QTQTLATIGYMAPEYGRE--GRVSANGDV 445 (547)
Q Consensus 375 lH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-------~~~~~gt~~y~aPE~~~~--~~~~~~sDv 445 (547)
|| +++|+||||||+||+++. .+||+|||+++........ .....||+.|+|||++.. ..|+..+|+
T Consensus 447 LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ 521 (540)
T 3en9_A 447 LH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDR 521 (540)
T ss_dssp HH---HTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTT
T ss_pred HH---HCcCccCCCCHHHEEECC--eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhH
Confidence 99 999999999999999999 9999999999876543221 124579999999999986 457888999
Q ss_pred HHHHHHHHHHHhCCCCCc
Q 047800 446 YSFGIMLMKTFIGKKPTD 463 (547)
Q Consensus 446 ~s~G~il~elltg~~p~~ 463 (547)
||..+-..+-+.++.+|.
T Consensus 522 ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 522 WEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHTCSCCC
T ss_pred HHHHHHHHHHHHhccccC
Confidence 999999999888887764
No 366
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.80 E-value=2.1e-20 Score=206.51 Aligned_cols=191 Identities=19% Similarity=0.182 Sum_probs=99.0
Q ss_pred CCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCC-----CCCCCCccccCCCCCcEEEccCCcccccCCccccC
Q 047800 10 HNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGS-----LSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGN 84 (547)
Q Consensus 10 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~-----~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 84 (547)
+.++.|+|++|.+... +..+ |+.++|++|.|++. .....|+.+..+++|+.|+|++|+|+. +|..+.+
T Consensus 173 ~~~~~l~L~~n~~~~~-~~~~-----l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~~-l~~~~~~ 245 (727)
T 4b8c_D 173 PLTPKIELFANGKDEA-NQAL-----LQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIFN-ISANIFK 245 (727)
T ss_dssp -------------------------------------------------------CCCCCCEEECTTSCCSC-CCGGGGG
T ss_pred CccceEEeeCCCCCcc-hhhH-----hhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCCC-CChhhcC
Confidence 4577788888887752 3332 23333333333311 001446677778888888888888886 5666667
Q ss_pred CCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcC
Q 047800 85 LRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFL 164 (547)
Q Consensus 85 l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l 164 (547)
+++|++|+|++|.|+.++. .|.++++|++|+|++|+|+.+ +.. +++++ +|++|+|++|.|
T Consensus 246 l~~L~~L~Ls~N~l~~lp~------~~~~l~~L~~L~Ls~N~l~~l-p~~-~~~l~------------~L~~L~L~~N~l 305 (727)
T 4b8c_D 246 YDFLTRLYLNGNSLTELPA------EIKNLSNLRVLDLSHNRLTSL-PAE-LGSCF------------QLKYFYFFDNMV 305 (727)
T ss_dssp CCSCSCCBCTTSCCSCCCG------GGGGGTTCCEEECTTSCCSSC-CSS-GGGGT------------TCSEEECCSSCC
T ss_pred CCCCCEEEeeCCcCcccCh------hhhCCCCCCEEeCcCCcCCcc-Chh-hcCCC------------CCCEEECCCCCC
Confidence 8888888888888886553 577788888888888888855 333 45555 788888888888
Q ss_pred CCCCCcCCCCCccccccccccccccCccccCCCCCcchhcCCC-CCEEECcCCcCCCCCCcchhCCCCCCeEeCCCC
Q 047800 165 TGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSN-NNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFN 240 (547)
Q Consensus 165 ~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~-L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N 240 (547)
+ .+|..|+++++|+.|+|++|.+ ++.+|+.+..+.. +..|+|++|.+++.+|.. |+.|+++.|
T Consensus 306 ~-~lp~~~~~l~~L~~L~L~~N~l------~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n 369 (727)
T 4b8c_D 306 T-TLPWEFGNLCNLQFLGVEGNPL------EKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTD 369 (727)
T ss_dssp C-CCCSSTTSCTTCCCEECTTSCC------CSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------------
T ss_pred C-ccChhhhcCCCccEEeCCCCcc------CCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecc
Confidence 7 5677788888888888888877 4566666654422 224667777777666643 344555555
No 367
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.78 E-value=3.3e-19 Score=164.34 Aligned_cols=86 Identities=28% Similarity=0.356 Sum_probs=44.7
Q ss_pred cccEEEccCCcCCCCCCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCC
Q 047800 153 DILYLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYL 232 (547)
Q Consensus 153 ~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L 232 (547)
+|++|+|++|+|++..|..|.++++|+.|+|++|.+ ++..|+.|..+++|++|+|++|++++..|..|..+++|
T Consensus 55 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l------~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 128 (192)
T 1w8a_A 55 HLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKI------KEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSL 128 (192)
T ss_dssp TCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCC------CEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTC
T ss_pred CCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcC------CccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCC
Confidence 455555555555544444555555555555555544 33444445555555555555555555555555555555
Q ss_pred CeEeCCCCcccc
Q 047800 233 DDLDLSFNKLEG 244 (547)
Q Consensus 233 ~~l~l~~N~l~~ 244 (547)
+.|++++|++.+
T Consensus 129 ~~L~L~~N~l~c 140 (192)
T 1w8a_A 129 TSLNLASNPFNC 140 (192)
T ss_dssp CEEECTTCCBCC
T ss_pred CEEEeCCCCccC
Confidence 555555555554
No 368
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.78 E-value=9.6e-22 Score=210.90 Aligned_cols=198 Identities=20% Similarity=0.132 Sum_probs=162.6
Q ss_pred cCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEccccc-------------CCCCCCCCCCccccCCCCCcEEE-ccC
Q 047800 6 IGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNS-------------LSGSLSGTIPRFIFNSSKLSILS-LAK 71 (547)
Q Consensus 6 ~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~-------------l~~~~~~~~p~~~~~l~~L~~L~-Ls~ 71 (547)
+...++|+.|+|++|+|+ .+|..++++++|++|++++|. +. +.+|..++++++|+.|+ ++.
T Consensus 345 ~~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~----~~~~~~l~~l~~L~~L~~l~~ 419 (567)
T 1dce_A 345 SATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPL----LYEKETLQYFSTLKAVDPMRA 419 (567)
T ss_dssp CSTTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTG----GGHHHHHHHHHHHHHHCGGGH
T ss_pred cccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccc----cCCHHHHHHHHhcccCcchhh
Confidence 367899999999999998 689999999999999998875 44 57788888999999998 666
Q ss_pred CcccccCCc-----cccC--CCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchh
Q 047800 72 NSFSSFIPN-----TFGN--LRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLE 144 (547)
Q Consensus 72 N~l~~~~~~-----~~~~--l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~ 144 (547)
|.++.+..- .+.. ...|+.|+|++|.|++++ .|.++++|+.|+|++|+|+.++. . +++++
T Consensus 420 n~~~~L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~lp-------~~~~l~~L~~L~Ls~N~l~~lp~-~-~~~l~---- 486 (567)
T 1dce_A 420 AYLDDLRSKFLLENSVLKMEYADVRVLHLAHKDLTVLC-------HLEQLLLVTHLDLSHNRLRALPP-A-LAALR---- 486 (567)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCSEEECTTSCCSSCC-------CGGGGTTCCEEECCSSCCCCCCG-G-GGGCT----
T ss_pred cccchhhhhhhhcccccccCccCceEEEecCCCCCCCc-------CccccccCcEeecCcccccccch-h-hhcCC----
Confidence 654432110 1111 135999999999999975 37789999999999999997654 3 56666
Q ss_pred hhccccCCcccEEEccCCcCCCCCCcCCCCCccccccccccccccCccccCCCC-CcchhcCCCCCEEECcCCcCCCCCC
Q 047800 145 FFVMSYCNDILYLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSI-PESFGDLSNNNTLNLSNNNLSGAIP 223 (547)
Q Consensus 145 ~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~~ 223 (547)
+|+.|+|++|+|++ +| .++++++|+.|+|++|.+ ++.. |+.|+.+++|+.|+|++|++++.+|
T Consensus 487 --------~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l------~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 487 --------CLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRL------QQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp --------TCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCC------CSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred --------CCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCC------CCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 99999999999996 56 899999999999999999 4565 9999999999999999999998766
Q ss_pred c---chhCCCCCCeEeC
Q 047800 224 I---SLEKLSYLDDLDL 237 (547)
Q Consensus 224 ~---~~~~l~~L~~l~l 237 (547)
. .+..+++|+.|++
T Consensus 551 ~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 551 IQERLAEMLPSVSSILT 567 (567)
T ss_dssp CTTHHHHHCTTCSEEEC
T ss_pred HHHHHHHHCcccCccCC
Confidence 3 3455899999875
No 369
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.77 E-value=8.2e-20 Score=201.86 Aligned_cols=195 Identities=21% Similarity=0.214 Sum_probs=120.3
Q ss_pred CcEEEccCCcccc---------CCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccc
Q 047800 12 LEYLGFGHNKLVG---------VVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTF 82 (547)
Q Consensus 12 L~~L~Ls~N~i~~---------~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 82 (547)
|+.++|++|.|.+ ..++.|..+++|+.|+|++|.|+ .+|..++++++|++|+|++|+|+. +|..|
T Consensus 193 l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-----~l~~~~~~l~~L~~L~Ls~N~l~~-lp~~~ 266 (727)
T 4b8c_D 193 LQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-----NISANIFKYDFLTRLYLNGNSLTE-LPAEI 266 (727)
T ss_dssp -----------------------------CCCCCCEEECTTSCCS-----CCCGGGGGCCSCSCCBCTTSCCSC-CCGGG
T ss_pred hhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-----CCChhhcCCCCCCEEEeeCCcCcc-cChhh
Confidence 4555555555443 45888999999999999999998 888888899999999999999995 78999
Q ss_pred cCCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCC
Q 047800 83 GNLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSN 162 (547)
Q Consensus 83 ~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N 162 (547)
++|++|++|+|++|+|+.+|. .|.+|++|++|+|++|.|+.++.. +++++ +|+.|+|++|
T Consensus 267 ~~l~~L~~L~Ls~N~l~~lp~------~~~~l~~L~~L~L~~N~l~~lp~~--~~~l~------------~L~~L~L~~N 326 (727)
T 4b8c_D 267 KNLSNLRVLDLSHNRLTSLPA------ELGSCFQLKYFYFFDNMVTTLPWE--FGNLC------------NLQFLGVEGN 326 (727)
T ss_dssp GGGTTCCEEECTTSCCSSCCS------SGGGGTTCSEEECCSSCCCCCCSS--TTSCT------------TCCCEECTTS
T ss_pred hCCCCCCEEeCcCCcCCccCh------hhcCCCCCCEEECCCCCCCccChh--hhcCC------------CccEEeCCCC
Confidence 999999999999999997754 588899999999999999877543 56666 8999999999
Q ss_pred cCCCCCCcCCCCCcc-ccccccccccccCccccCCCCCcchhcCCCCCEEECcCC--------cCCCCCCcchhCCCCCC
Q 047800 163 FLTGPLPLEIGNLKG-LVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNN--------NLSGAIPISLEKLSYLD 233 (547)
Q Consensus 163 ~l~~~~p~~~~~l~~-L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N--------~l~~~~~~~~~~l~~L~ 233 (547)
.|++.+|..+..+.. +..|+|++|.+ +|.+|.. |..|++++| .+.+..+..+..+..+.
T Consensus 327 ~l~~~~p~~~~~~~~~~~~l~l~~N~l------~~~~p~~------l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~ 394 (727)
T 4b8c_D 327 PLEKQFLKILTEKSVTGLIFYLRDNRP------EIPLPHE------RRFIEINTDGEPQREYDSLQQSTEHLATDLAKRT 394 (727)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCCC------CCCCCCC----------------------------------------
T ss_pred ccCCCChHHHhhcchhhhHHhhccCcc------cCcCccc------cceeEeecccccccccCCccccccchhhcccccc
Confidence 999888888766533 34588999988 5677764 456667766 44555555666777778
Q ss_pred eEeCCCCcccc
Q 047800 234 DLDLSFNKLEG 244 (547)
Q Consensus 234 ~l~l~~N~l~~ 244 (547)
...+++|.+..
T Consensus 395 ~~~ls~Nil~~ 405 (727)
T 4b8c_D 395 FTVLSYNTLCQ 405 (727)
T ss_dssp -------CCCG
T ss_pred eeeeecccccc
Confidence 88888888764
No 370
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.77 E-value=2.6e-19 Score=179.57 Aligned_cols=235 Identities=15% Similarity=0.117 Sum_probs=160.7
Q ss_pred CCCCcEEEccCCccccCCChhhcC-CCCCCEEEcccccCC--CCCCC-------------CCCc-cccC--------CCC
Q 047800 9 LHNLEYLGFGHNKLVGVVPATIFN-LSTLKHLELYNNSLS--GSLSG-------------TIPR-FIFN--------SSK 63 (547)
Q Consensus 9 l~~L~~L~Ls~N~i~~~~~~~~~~-l~~L~~L~L~~N~l~--~~~~~-------------~~p~-~~~~--------l~~ 63 (547)
+.+|+.|.++++ +....-..+.. +++|+.|||++|+|. ....+ .+|+ +|.+ +++
T Consensus 24 ~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~ 102 (329)
T 3sb4_A 24 ANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQT 102 (329)
T ss_dssp HHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTT
T ss_pred hCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCC
Confidence 456777777754 22222223333 677777777777776 11111 2222 4446 788
Q ss_pred CcEEEccCCcccccCCccccCCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCC----CCCCCCCccccccc
Q 047800 64 LSILSLAKNSFSSFIPNTFGNLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNN----PLDGILHRTYMGNL 139 (547)
Q Consensus 64 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N----~l~~~~~~~~~~~l 139 (547)
|+.|+|.+ +++.+.+.+|.+|++|++|++++|.++.+++. +|.++.++..+.++.+ ....+...+|.+..
T Consensus 103 L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~-----aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~ 176 (329)
T 3sb4_A 103 LEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPE-----ALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGE 176 (329)
T ss_dssp CCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTT-----SSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESC
T ss_pred CcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchh-----hhcCCCceEEecCcchhhhhcccccccccccccc
Confidence 88888887 77777777788888888888888888777776 7777777777776663 22233332321100
Q ss_pred Cc----------chhh---------------------------hccccCCcccEEEccCCcCCCCCCcCCCCCccccccc
Q 047800 140 SH----------SLEF---------------------------FVMSYCNDILYLDLSSNFLTGPLPLEIGNLKGLVGVD 182 (547)
Q Consensus 140 ~~----------~~~~---------------------------~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ 182 (547)
.. .+.. .....|++|+.|+|++|+++.+.+..|.++++|+.|+
T Consensus 177 ~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~ 256 (329)
T 3sb4_A 177 PLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIK 256 (329)
T ss_dssp CCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEE
T ss_pred ccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEE
Confidence 00 0000 0012388999999999999988888999999999999
Q ss_pred cccccccCccccCCCCCcchhcCCCCC-EEECcCCcCCCCCCcchhCCCCCCeEeCCCCccccccCCC-CccCCcchh
Q 047800 183 FSMNNFSGYNKLQGSIPESFGDLSNNN-TLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKLEGEILRG-GSFGNFLVE 258 (547)
Q Consensus 183 ls~N~~~~~n~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~~~l~~l 258 (547)
+++| + +...+.+|.+|++|+ .+++.+ .++.+.+.+|.++++|+.|+++.|.++....+. ..+.+++.+
T Consensus 257 l~~n-i------~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~l 326 (329)
T 3sb4_A 257 LPHN-L------KTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLI 326 (329)
T ss_dssp CCTT-C------CEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEE
T ss_pred CCcc-c------ceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhh
Confidence 9998 5 446677899999999 999999 788788899999999999999999999766554 334444433
No 371
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.77 E-value=9.4e-19 Score=157.53 Aligned_cols=133 Identities=22% Similarity=0.192 Sum_probs=83.7
Q ss_pred CCCCcEEEccCCccc-cCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCC
Q 047800 9 LHNLEYLGFGHNKLV-GVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRN 87 (547)
Q Consensus 9 l~~L~~L~Ls~N~i~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 87 (547)
.++|+.|+|++|+|+ +.+|..|..+++|++|+|++|.|+ .+ ..+..+++|++|+|++|+|++.+|..+.++++
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~-----~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 96 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLI-----SV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPN 96 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCC-----CC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTT
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCC-----Ch-hhhccCCCCCEEECcCCcCchHHHHHHhhCCC
Confidence 456777777777776 455666666777777777777766 33 55666667777777777776666666666666
Q ss_pred CCeeeccccccccccC-chhhHhhhcCCCCCcEEeCcCCCCCCCCC---cccccccCcchhhhccccCCcccEEEccCCc
Q 047800 88 LNELALHNNYLTSSTL-ELSFLSLLLNCKSLTHIGLSNNPLDGILH---RTYMGNLSHSLEFFVMSYCNDILYLDLSSNF 163 (547)
Q Consensus 88 L~~L~L~~N~i~~~~~-~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~---~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~ 163 (547)
|++|+|++|+|++++. . .+..+++|++|++++|+++++++ .. +..++ +|++|++++|.
T Consensus 97 L~~L~Ls~N~l~~~~~~~-----~l~~l~~L~~L~l~~N~l~~~~~~~~~~-~~~l~------------~L~~L~l~~n~ 158 (168)
T 2ell_A 97 LTHLNLSGNKLKDISTLE-----PLKKLECLKSLDLFNCEVTNLNDYRESV-FKLLP------------QLTYLDGYDRE 158 (168)
T ss_dssp CCEEECBSSSCCSSGGGG-----GGSSCSCCCEEECCSSGGGTSTTHHHHH-HTTCS------------SCCEETTEETT
T ss_pred CCEEeccCCccCcchhHH-----HHhcCCCCCEEEeeCCcCcchHHHHHHH-HHhCc------------cCcEecCCCCC
Confidence 7777777776666543 2 45666666666666666665544 12 33333 66666666666
Q ss_pred CC
Q 047800 164 LT 165 (547)
Q Consensus 164 l~ 165 (547)
+.
T Consensus 159 ~~ 160 (168)
T 2ell_A 159 DQ 160 (168)
T ss_dssp SC
T ss_pred hh
Confidence 65
No 372
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.77 E-value=9.5e-19 Score=175.46 Aligned_cols=202 Identities=13% Similarity=0.067 Sum_probs=165.4
Q ss_pred CCCCcEEEccCCccc--------------------cCCChhhcC--------CCCCCEEEcccccCCCCCCCCCC-cccc
Q 047800 9 LHNLEYLGFGHNKLV--------------------GVVPATIFN--------LSTLKHLELYNNSLSGSLSGTIP-RFIF 59 (547)
Q Consensus 9 l~~L~~L~Ls~N~i~--------------------~~~~~~~~~--------l~~L~~L~L~~N~l~~~~~~~~p-~~~~ 59 (547)
+++|++|||++|+|. .+.+.+|.+ +++|++|+|.+ +++ .|+ .+|.
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~-----~I~~~aF~ 121 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIK-----NIEDAAFK 121 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCC-----EECTTTTT
T ss_pred hccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-ccc-----chhHHHhh
Confidence 788999999999998 456678889 99999999999 888 555 4677
Q ss_pred CCCCCcEEEccCCcccccCCccccCCCCCCeeecccccc----ccccCc-------------------------------
Q 047800 60 NSSKLSILSLAKNSFSSFIPNTFGNLRNLNELALHNNYL----TSSTLE------------------------------- 104 (547)
Q Consensus 60 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i----~~~~~~------------------------------- 104 (547)
++++|+.|+|++|.++.+.+.+|.++.++..+.+..+.. ..+...
T Consensus 122 ~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~ 201 (329)
T 3sb4_A 122 GCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQP 201 (329)
T ss_dssp TCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCG
T ss_pred cCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCc
Confidence 999999999999999999999999999998888776322 111100
Q ss_pred --------------hhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCCCCCCc
Q 047800 105 --------------LSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGPLPL 170 (547)
Q Consensus 105 --------------~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~ 170 (547)
.++......|++|+.|+|++|+++.+...+ +.+ |.+|+.|+|++| ++.+.+.
T Consensus 202 ~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~a-F~~------------~~~L~~l~l~~n-i~~I~~~ 267 (329)
T 3sb4_A 202 RDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFT-FAQ------------KKYLLKIKLPHN-LKTIGQR 267 (329)
T ss_dssp GGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTT-TTT------------CTTCCEEECCTT-CCEECTT
T ss_pred cccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhh-hhC------------CCCCCEEECCcc-cceehHH
Confidence 000000113889999999999999998877 444 449999999999 8878889
Q ss_pred CCCCCcccc-ccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeC
Q 047800 171 EIGNLKGLV-GVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDL 237 (547)
Q Consensus 171 ~~~~l~~L~-~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l 237 (547)
.|.++++|+ .+++.+ .+ +...+.+|.+|++|+.+++++|+++...+.+|.++++|+.|+.
T Consensus 268 aF~~~~~L~~~l~l~~-~l------~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 268 VFSNCGRLAGTLELPA-SV------TAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp TTTTCTTCCEEEEECT-TC------CEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred HhhCChhccEEEEEcc-cc------eEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 999999999 999998 55 3466789999999999999999999888899999999999974
No 373
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.76 E-value=2.7e-18 Score=158.10 Aligned_cols=127 Identities=23% Similarity=0.332 Sum_probs=59.5
Q ss_pred CEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCc-cccCCCCCCeeeccccccccccCchhhHhhhcCCC
Q 047800 37 KHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPN-TFGNLRNLNELALHNNYLTSSTLELSFLSLLLNCK 115 (547)
Q Consensus 37 ~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~ 115 (547)
+.|++++|+|+ .+|..+.. +|++|+|++|+|+++.+. .|+.+++|++|+|++|+|+++++. .|.+++
T Consensus 11 ~~l~~s~~~l~-----~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-----~~~~l~ 78 (192)
T 1w8a_A 11 TTVDCTGRGLK-----EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPN-----AFEGAS 78 (192)
T ss_dssp TEEECTTSCCS-----SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTT-----TTTTCT
T ss_pred CEEEcCCCCcC-----cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHh-----HcCCcc
Confidence 34455555544 44443322 455555555555543332 244555555555555555544443 444444
Q ss_pred CCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCCCCCCcCCCCCccccccccccccc
Q 047800 116 SLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNF 188 (547)
Q Consensus 116 ~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~ 188 (547)
+|++|+|++|+|+++.+.. +.+++ +|++|+|++|+|++.+|..|..+++|+.|+|++|.+
T Consensus 79 ~L~~L~Ls~N~l~~~~~~~-~~~l~------------~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 138 (192)
T 1w8a_A 79 HIQELQLGENKIKEISNKM-FLGLH------------QLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPF 138 (192)
T ss_dssp TCCEEECCSCCCCEECSSS-STTCT------------TCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCB
T ss_pred cCCEEECCCCcCCccCHHH-hcCCC------------CCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCc
Confidence 5555555555544444433 22233 455555555555444444444444444444444444
No 374
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.75 E-value=4.9e-18 Score=156.48 Aligned_cols=107 Identities=22% Similarity=0.300 Sum_probs=51.6
Q ss_pred cEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCeee
Q 047800 13 EYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRNLNELA 92 (547)
Q Consensus 13 ~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 92 (547)
+.+++++|+|+. +|..+. ++|++|+|++|+|+ .+|..|.++++|+.|+|++|+|+++.+.+|.++++|++|+
T Consensus 13 ~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~n~i~-----~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ 84 (193)
T 2wfh_A 13 TVVRCSNKGLKV-LPKGIP--RDVTELYLDGNQFT-----LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLI 84 (193)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCCEEECCSSCCC-----SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CEEEcCCCCCCc-CCCCCC--CCCCEEECCCCcCc-----hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEE
Confidence 345555555542 222221 34555555555554 4444444555555555555555554444455555555555
Q ss_pred ccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCC
Q 047800 93 LHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILH 132 (547)
Q Consensus 93 L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 132 (547)
|++|+|+++++. .|.++++|++|+|++|+|+.+++
T Consensus 85 Ls~N~l~~i~~~-----~f~~l~~L~~L~L~~N~l~~~~~ 119 (193)
T 2wfh_A 85 LSYNRLRCIPPR-----TFDGLKSLRLLSLHGNDISVVPE 119 (193)
T ss_dssp CCSSCCCBCCTT-----TTTTCTTCCEEECCSSCCCBCCT
T ss_pred CCCCccCEeCHH-----HhCCCCCCCEEECCCCCCCeeCh
Confidence 555555554444 44444444444444444444433
No 375
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.74 E-value=1.2e-17 Score=153.99 Aligned_cols=126 Identities=24% Similarity=0.299 Sum_probs=84.6
Q ss_pred CEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCeeeccccccccccCchhhHhhhcCCCC
Q 047800 37 KHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRNLNELALHNNYLTSSTLELSFLSLLLNCKS 116 (547)
Q Consensus 37 ~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~ 116 (547)
+.+++++|+|+ .+|..+. ++|++|+|++|+|+. +|..|.++++|++|+|++|+|+++++. .|.++++
T Consensus 13 ~~l~~~~~~l~-----~ip~~~~--~~l~~L~L~~n~i~~-ip~~~~~l~~L~~L~Ls~N~i~~i~~~-----~f~~l~~ 79 (193)
T 2wfh_A 13 TVVRCSNKGLK-----VLPKGIP--RDVTELYLDGNQFTL-VPKELSNYKHLTLIDLSNNRISTLSNQ-----SFSNMTQ 79 (193)
T ss_dssp TEEECTTSCCS-----SCCSCCC--TTCCEEECCSSCCCS-CCGGGGGCTTCCEEECCSSCCCCCCTT-----TTTTCTT
T ss_pred CEEEcCCCCCC-----cCCCCCC--CCCCEEECCCCcCch-hHHHhhcccCCCEEECCCCcCCEeCHh-----HccCCCC
Confidence 56777778777 6666543 467777777777775 557777777777777777777777765 6777777
Q ss_pred CcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCCCCCCcCCCCCccccccccccccc
Q 047800 117 LTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNF 188 (547)
Q Consensus 117 L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~ 188 (547)
|++|+|++|+|+++.+.. +..++ +|++|+|++|+|+...+..|..+++|+.|++++|.+
T Consensus 80 L~~L~Ls~N~l~~i~~~~-f~~l~------------~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 138 (193)
T 2wfh_A 80 LLTLILSYNRLRCIPPRT-FDGLK------------SLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPL 138 (193)
T ss_dssp CCEEECCSSCCCBCCTTT-TTTCT------------TCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCE
T ss_pred CCEEECCCCccCEeCHHH-hCCCC------------CCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCe
Confidence 777777777777666555 34444 666666666666655444555555555555555555
No 376
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.74 E-value=5.5e-18 Score=152.45 Aligned_cols=133 Identities=24% Similarity=0.180 Sum_probs=71.7
Q ss_pred CCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCeeeccccccccccCchhhHhhhcC
Q 047800 34 STLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRNLNELALHNNYLTSSTLELSFLSLLLN 113 (547)
Q Consensus 34 ~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~ 113 (547)
++|++|+|++|+|++ +.+|..+..+++|+.|+|++|.|+++ ..|..+++|++|+|++|+|++..+. .+.+
T Consensus 24 ~~L~~L~l~~n~l~~---~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~-----~~~~ 93 (168)
T 2ell_A 24 AAVRELVLDNCKSND---GKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDM-----LAEK 93 (168)
T ss_dssp TSCSEEECCSCBCBT---TBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCH-----HHHH
T ss_pred ccCCEEECCCCCCCh---hhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHH-----HHhh
Confidence 556666666666542 35555555666666666666666653 5556666666666666666654333 3444
Q ss_pred CCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCCCCCC---cCCCCCccccccccccccc
Q 047800 114 CKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGPLP---LEIGNLKGLVGVDFSMNNF 188 (547)
Q Consensus 114 l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~~~p---~~~~~l~~L~~L~ls~N~~ 188 (547)
+++|++|+|++|+|+++.....+..++ +|++|++++|.+++..+ ..+..+++|+.|++++|.+
T Consensus 94 l~~L~~L~Ls~N~l~~~~~~~~l~~l~------------~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~ 159 (168)
T 2ell_A 94 LPNLTHLNLSGNKLKDISTLEPLKKLE------------CLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRED 159 (168)
T ss_dssp CTTCCEEECBSSSCCSSGGGGGGSSCS------------CCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTS
T ss_pred CCCCCEEeccCCccCcchhHHHHhcCC------------CCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCCh
Confidence 566666666666655543211123333 55555555555553333 2444455555555555544
No 377
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.73 E-value=3.8e-18 Score=150.26 Aligned_cols=114 Identities=20% Similarity=0.203 Sum_probs=84.7
Q ss_pred CCCCCcEEEccCCccc-cCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCC
Q 047800 8 NLHNLEYLGFGHNKLV-GVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLR 86 (547)
Q Consensus 8 ~l~~L~~L~Ls~N~i~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 86 (547)
..++|+.|++++|+|+ +.+|..+..+++|++|+|++|+|+ .+ ..+.++++|++|+|++|+|++.+|..+..++
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~-----~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~ 88 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLT-----SI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCP 88 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCC-----CC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCT
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCC-----Cc-hhhhcCCCCCEEECCCCcccchHHHHhhhCC
Confidence 3467888888888887 667777788888888888888887 33 6667778888888888888876677777778
Q ss_pred CCCeeeccccccccccC-chhhHhhhcCCCCCcEEeCcCCCCCCCCC
Q 047800 87 NLNELALHNNYLTSSTL-ELSFLSLLLNCKSLTHIGLSNNPLDGILH 132 (547)
Q Consensus 87 ~L~~L~L~~N~i~~~~~-~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 132 (547)
+|++|++++|+|++++. . .+..+++|++|++++|+++++++
T Consensus 89 ~L~~L~ls~N~i~~~~~~~-----~~~~l~~L~~L~l~~N~l~~~~~ 130 (149)
T 2je0_A 89 NLTHLNLSGNKIKDLSTIE-----PLKKLENLKSLDLFNCEVTNLND 130 (149)
T ss_dssp TCCEEECTTSCCCSHHHHG-----GGGGCTTCCEEECTTCGGGGSTT
T ss_pred CCCEEECCCCcCCChHHHH-----HHhhCCCCCEEeCcCCcccchHH
Confidence 88888888887777542 2 56777777777777777776654
No 378
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.72 E-value=4.5e-17 Score=147.80 Aligned_cols=44 Identities=34% Similarity=0.401 Sum_probs=17.9
Q ss_pred cCCCCCcEEEccCCcccccCCccccCCCCCCeeecccccccccc
Q 047800 59 FNSSKLSILSLAKNSFSSFIPNTFGNLRNLNELALHNNYLTSST 102 (547)
Q Consensus 59 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~ 102 (547)
.++++|++|+|++|+|+++.+..|.++++|++|+|++|+|++++
T Consensus 49 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 92 (177)
T 2o6r_A 49 DKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLP 92 (177)
T ss_dssp TTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred cCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccC
Confidence 33444444444444444433333344444444444444444333
No 379
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.72 E-value=4e-17 Score=148.16 Aligned_cols=129 Identities=22% Similarity=0.246 Sum_probs=114.1
Q ss_pred CCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCeeeccccccccccCchhhHhhhcCCC
Q 047800 36 LKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRNLNELALHNNYLTSSTLELSFLSLLLNCK 115 (547)
Q Consensus 36 L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~ 115 (547)
.+.+++++|+++ .+|..+. ++|+.|+|++|+|+++.+..|.++++|++|+|++|+|+++++. .|.+++
T Consensus 9 ~~~l~~~~~~l~-----~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-----~~~~l~ 76 (177)
T 2o6r_A 9 GTEIRCNSKGLT-----SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDG-----VFDKLT 76 (177)
T ss_dssp TTEEECCSSCCS-----SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTT-----TTTTCT
T ss_pred CCEEEecCCCCc-----cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChh-----HccCCC
Confidence 478889999988 7776544 6899999999999998888899999999999999999999887 789999
Q ss_pred CCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCCCCCCcCCCCCcccccccccccccc
Q 047800 116 SLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFS 189 (547)
Q Consensus 116 ~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~~ 189 (547)
+|++|+|++|+|+++++.. +.+++ +|++|++++|+|++.++..|.++++|+.|++++|.+.
T Consensus 77 ~L~~L~l~~N~l~~~~~~~-~~~l~------------~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 137 (177)
T 2o6r_A 77 KLTILYLHENKLQSLPNGV-FDKLT------------QLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 137 (177)
T ss_dssp TCCEEECCSSCCCCCCTTT-TTTCT------------TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ccCEEECCCCCccccCHHH-hhCCc------------ccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCee
Confidence 9999999999999888766 55556 8999999999999877777899999999999999984
No 380
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.71 E-value=1.3e-17 Score=151.37 Aligned_cols=133 Identities=20% Similarity=0.228 Sum_probs=72.3
Q ss_pred hcCCCCCCEEEcccccCCCCCCCCCCccccCC-CCCcEEEccCCcccccCCccccCCCCCCeeeccccccccccCchhhH
Q 047800 30 IFNLSTLKHLELYNNSLSGSLSGTIPRFIFNS-SKLSILSLAKNSFSSFIPNTFGNLRNLNELALHNNYLTSSTLELSFL 108 (547)
Q Consensus 30 ~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~ 108 (547)
+.++++|++|+|++|+|+ .+|. +..+ ++|+.|+|++|.|+++ ..|..+++|++|+|++|+|+++++.
T Consensus 15 ~~~~~~L~~L~l~~n~l~-----~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~---- 82 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-----VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEG---- 82 (176)
T ss_dssp EECTTSCEEEECTTSCCC-----SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSC----
T ss_pred cCCcCCceEEEeeCCCCc-----hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcc----
Confidence 445555555555555555 3333 2333 3566666666665553 4555566666666666666655544
Q ss_pred hhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCCCCCCc----CCCCCccccccccc
Q 047800 109 SLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGPLPL----EIGNLKGLVGVDFS 184 (547)
Q Consensus 109 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~----~~~~l~~L~~L~ls 184 (547)
.|..+++|++|+|++|+|+.++.-..+..++ +|+.|++++|.++. .|. .+..+++|+.||++
T Consensus 83 -~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~------------~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~ 148 (176)
T 1a9n_A 83 -LDQALPDLTELILTNNSLVELGDLDPLASLK------------SLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQ 148 (176)
T ss_dssp -HHHHCTTCCEEECCSCCCCCGGGGGGGGGCT------------TCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTE
T ss_pred -hhhcCCCCCEEECCCCcCCcchhhHhhhcCC------------CCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCC
Confidence 4455566666666666665443311122333 56666666666653 333 25666666666666
Q ss_pred cccc
Q 047800 185 MNNF 188 (547)
Q Consensus 185 ~N~~ 188 (547)
.|.+
T Consensus 149 ~n~~ 152 (176)
T 1a9n_A 149 KVKL 152 (176)
T ss_dssp ECCH
T ss_pred cCCH
Confidence 6655
No 381
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.69 E-value=1.6e-17 Score=146.26 Aligned_cols=86 Identities=27% Similarity=0.377 Sum_probs=42.2
Q ss_pred CCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCeeeccccccccccCchhhHhhhcC
Q 047800 34 STLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRNLNELALHNNYLTSSTLELSFLSLLLN 113 (547)
Q Consensus 34 ~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~ 113 (547)
++|+.|++++|.+++ +.+|..+..+++|++|+|++|+|+++ ..|+.+++|++|+|++|+|++..+. .+..
T Consensus 17 ~~l~~L~l~~n~l~~---~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~-----~~~~ 86 (149)
T 2je0_A 17 SDVKELVLDNSRSNE---GKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEV-----LAEK 86 (149)
T ss_dssp GGCSEEECTTCBCBT---TBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHH-----HHHH
T ss_pred ccCeEEEccCCcCCh---hHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHH-----Hhhh
Confidence 445555555555541 24444445555555555555555553 4445555555555555555543222 3334
Q ss_pred CCCCcEEeCcCCCCCC
Q 047800 114 CKSLTHIGLSNNPLDG 129 (547)
Q Consensus 114 l~~L~~L~Ls~N~l~~ 129 (547)
+++|++|++++|+|++
T Consensus 87 l~~L~~L~ls~N~i~~ 102 (149)
T 2je0_A 87 CPNLTHLNLSGNKIKD 102 (149)
T ss_dssp CTTCCEEECTTSCCCS
T ss_pred CCCCCEEECCCCcCCC
Confidence 4455555555555444
No 382
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.68 E-value=3.7e-17 Score=148.30 Aligned_cols=140 Identities=20% Similarity=0.170 Sum_probs=88.9
Q ss_pred ccCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccC
Q 047800 5 EIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGN 84 (547)
Q Consensus 5 ~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 84 (547)
.+.+.++|+.|+|++|+|+.+ |......++|++|+|++|+|+ .+ +.+..+++|++|+|++|+|+++.+..|.+
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~i-~~~~~~~~~L~~L~Ls~N~l~-----~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 86 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIR-----KL-DGFPLLRRLKTLLVNNNRICRIGEGLDQA 86 (176)
T ss_dssp EEECTTSCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSSCCC-----EE-CCCCCCSSCCEEECCSSCCCEECSCHHHH
T ss_pred hcCCcCCceEEEeeCCCCchh-HHhhhcCCCCCEEECCCCCCC-----cc-cccccCCCCCEEECCCCcccccCcchhhc
Confidence 456667777777777777743 443333337777777777777 33 56667777777777777777755555677
Q ss_pred CCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcC
Q 047800 85 LRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFL 164 (547)
Q Consensus 85 l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l 164 (547)
+++|++|+|++|+|+.++.- ..+..+++|++|++++|+++.++... ...+..+++|+.||+++|.+
T Consensus 87 l~~L~~L~L~~N~i~~~~~~----~~l~~l~~L~~L~l~~N~i~~~~~~~----------~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 87 LPDLTELILTNNSLVELGDL----DPLASLKSLTYLCILRNPVTNKKHYR----------LYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp CTTCCEEECCSCCCCCGGGG----GGGGGCTTCCEEECCSSGGGGSTTHH----------HHHHHHCTTCSEETTEECCH
T ss_pred CCCCCEEECCCCcCCcchhh----HhhhcCCCCCEEEecCCCCCCcHhHH----------HHHHHHCCccceeCCCcCCH
Confidence 77777777777777665541 14666777777777777776554320 00122233777777777766
Q ss_pred C
Q 047800 165 T 165 (547)
Q Consensus 165 ~ 165 (547)
.
T Consensus 153 ~ 153 (176)
T 1a9n_A 153 K 153 (176)
T ss_dssp H
T ss_pred H
Confidence 4
No 383
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.68 E-value=5.6e-16 Score=159.05 Aligned_cols=225 Identities=15% Similarity=0.145 Sum_probs=146.0
Q ss_pred cccCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCC-CccccCCCCCcEEEccCCcccccCCccc
Q 047800 4 PEIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTI-PRFIFNSSKLSILSLAKNSFSSFIPNTF 82 (547)
Q Consensus 4 ~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 82 (547)
.+|.+. +|+.++|..| |+.+...+|.+ .+|+.+.|.. .++ .+ +.+|.++++|+.++|++|+++.+...+|
T Consensus 130 ~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~-----~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF 200 (401)
T 4fdw_A 130 DAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLE-----QLKEDIFYYCYNLKKADLSKTKITKLPASTF 200 (401)
T ss_dssp TTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCC-----EECSSTTTTCTTCCEEECTTSCCSEECTTTT
T ss_pred hhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-Ccc-----EehHHHhhCcccCCeeecCCCcceEechhhE
Confidence 467774 7999999887 88888899998 4799999986 666 44 4577799999999999999999888888
Q ss_pred cCCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCC
Q 047800 83 GNLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSN 162 (547)
Q Consensus 83 ~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N 162 (547)
. +++|+.+.|.+| ++.+... +|.+|.+|+.+++..| ++.+...+|.+ . +|+.+.+ .|
T Consensus 201 ~-~~~L~~l~lp~~-l~~I~~~-----aF~~~~~L~~l~l~~~-l~~I~~~aF~~--~------------~L~~i~l-p~ 257 (401)
T 4fdw_A 201 V-YAGIEEVLLPVT-LKEIGSQ-----AFLKTSQLKTIEIPEN-VSTIGQEAFRE--S------------GITTVKL-PN 257 (401)
T ss_dssp T-TCCCSEEECCTT-CCEECTT-----TTTTCTTCCCEECCTT-CCEECTTTTTT--C------------CCSEEEE-ET
T ss_pred e-ecccCEEEeCCc-hheehhh-----HhhCCCCCCEEecCCC-ccCcccccccc--C------------CccEEEe-CC
Confidence 7 589999999855 8888887 8999999999999975 77777777543 2 4555555 23
Q ss_pred cCCCCCCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCCcc
Q 047800 163 FLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKL 242 (547)
Q Consensus 163 ~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l 242 (547)
.++.+.+..|.++++|+.+++.+|.+. .+.+....+.+|.+|++|+.++|.+ .++.....+|.++.+|+.+++..| +
T Consensus 258 ~i~~I~~~aF~~c~~L~~l~l~~~~~~-~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~-l 334 (401)
T 4fdw_A 258 GVTNIASRAFYYCPELAEVTTYGSTFN-DDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN-V 334 (401)
T ss_dssp TCCEECTTTTTTCTTCCEEEEESSCCC-CCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECTT-C
T ss_pred CccEEChhHhhCCCCCCEEEeCCcccc-CCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc-c
Confidence 344344555555555555555554431 0011123334455555555555552 344444455555555555555433 3
Q ss_pred ccccCCC-CccCCcchhcccCcc
Q 047800 243 EGEILRG-GSFGNFLVELFEGNK 264 (547)
Q Consensus 243 ~~~~~~~-~~~~~l~~l~l~~N~ 264 (547)
+...... ..+ ++..+.+.+|.
T Consensus 335 ~~I~~~aF~~~-~L~~l~l~~n~ 356 (401)
T 4fdw_A 335 TQINFSAFNNT-GIKEVKVEGTT 356 (401)
T ss_dssp CEECTTSSSSS-CCCEEEECCSS
T ss_pred cEEcHHhCCCC-CCCEEEEcCCC
Confidence 3222222 222 44455555443
No 384
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.67 E-value=2e-19 Score=166.68 Aligned_cols=137 Identities=24% Similarity=0.235 Sum_probs=83.9
Q ss_pred CCCCCCcEEEccCCccccCCCh------hhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCc
Q 047800 7 GNLHNLEYLGFGHNKLVGVVPA------TIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPN 80 (547)
Q Consensus 7 ~~l~~L~~L~Ls~N~i~~~~~~------~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 80 (547)
....+++.++++.|.+++..|. .|..+++|++|+|++|+|+ .+| .+.++++|++|+|++|+|+. +|.
T Consensus 15 ~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~-----~l~-~~~~l~~L~~L~l~~n~l~~-l~~ 87 (198)
T 1ds9_A 15 EERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIE-----KIS-SLSGMENLRILSLGRNLIKK-IEN 87 (198)
T ss_dssp HHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEES-----CCC-CHHHHTTCCEEEEEEEEECS-CSS
T ss_pred HhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCc-----ccc-ccccCCCCCEEECCCCCccc-ccc
Confidence 3445666666777776666555 6777777777777777776 455 66666777777777777765 556
Q ss_pred cccCCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEcc
Q 047800 81 TFGNLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLS 160 (547)
Q Consensus 81 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls 160 (547)
.+..+++|++|+|++|+|++++ .+..+++|++|+|++|+|+.+..-..+..++ +|++|+++
T Consensus 88 ~~~~~~~L~~L~L~~N~l~~l~-------~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~------------~L~~L~l~ 148 (198)
T 1ds9_A 88 LDAVADTLEELWISYNQIASLS-------GIEKLVNLRVLYMSNNKITNWGEIDKLAALD------------KLEDLLLA 148 (198)
T ss_dssp HHHHHHHCSEEEEEEEECCCHH-------HHHHHHHSSEEEESEEECCCHHHHHHHTTTT------------TCSEEEEC
T ss_pred hhhcCCcCCEEECcCCcCCcCC-------ccccCCCCCEEECCCCcCCchhHHHHHhcCC------------CCCEEEec
Confidence 6666667777777777766643 3445566666666666665543211122333 56666666
Q ss_pred CCcCCCCCC
Q 047800 161 SNFLTGPLP 169 (547)
Q Consensus 161 ~N~l~~~~p 169 (547)
+|.+++.+|
T Consensus 149 ~N~l~~~~~ 157 (198)
T 1ds9_A 149 GNPLYNDYK 157 (198)
T ss_dssp SCHHHHHHH
T ss_pred CCccccccc
Confidence 666654433
No 385
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.65 E-value=1.6e-15 Score=155.67 Aligned_cols=205 Identities=12% Similarity=0.160 Sum_probs=153.2
Q ss_pred cccCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCcccc
Q 047800 4 PEIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFG 83 (547)
Q Consensus 4 ~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 83 (547)
.+|.+ .+|+.++|.+ .++.+.+.+|.++++|+.++|++|+++ .+|...+..++|+.+.|.+| ++.+...+|.
T Consensus 152 ~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~-----~I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~ 223 (401)
T 4fdw_A 152 MAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKIT-----KLPASTFVYAGIEEVLLPVT-LKEIGSQAFL 223 (401)
T ss_dssp TTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCS-----EECTTTTTTCCCSEEECCTT-CCEECTTTTT
T ss_pred HhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcce-----EechhhEeecccCEEEeCCc-hheehhhHhh
Confidence 45666 4688888886 677777888888888888888888888 67666555688888888744 7777788888
Q ss_pred CCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCc
Q 047800 84 NLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNF 163 (547)
Q Consensus 84 ~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~ 163 (547)
++++|+.+++.+| ++.+... +|.+ .+|+.+.| .|.++.+...+ |.+|.+|+.+++.+|.
T Consensus 224 ~~~~L~~l~l~~~-l~~I~~~-----aF~~-~~L~~i~l-p~~i~~I~~~a-------------F~~c~~L~~l~l~~~~ 282 (401)
T 4fdw_A 224 KTSQLKTIEIPEN-VSTIGQE-----AFRE-SGITTVKL-PNGVTNIASRA-------------FYYCPELAEVTTYGST 282 (401)
T ss_dssp TCTTCCCEECCTT-CCEECTT-----TTTT-CCCSEEEE-ETTCCEECTTT-------------TTTCTTCCEEEEESSC
T ss_pred CCCCCCEEecCCC-ccCcccc-----cccc-CCccEEEe-CCCccEEChhH-------------hhCCCCCCEEEeCCcc
Confidence 8888888888875 6777766 7777 67888888 45566666655 2344588888888877
Q ss_pred CC-----CCCCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCC
Q 047800 164 LT-----GPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLS 238 (547)
Q Consensus 164 l~-----~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~ 238 (547)
+. .+.+..|.++++|+.+++.++ + +.....+|.+|++|+.++|.+| ++...+.+|.++ +|+.|+++
T Consensus 283 ~~~~~~~~I~~~aF~~c~~L~~l~l~~~-i------~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~ 353 (401)
T 4fdw_A 283 FNDDPEAMIHPYCLEGCPKLARFEIPES-I------RILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVE 353 (401)
T ss_dssp CCCCTTCEECTTTTTTCTTCCEECCCTT-C------CEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEEC
T ss_pred ccCCcccEECHHHhhCCccCCeEEeCCc-e------EEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEc
Confidence 65 466778888888888888743 5 3355567888888888888655 666677788888 88888888
Q ss_pred CCcccccc
Q 047800 239 FNKLEGEI 246 (547)
Q Consensus 239 ~N~l~~~~ 246 (547)
+|.+....
T Consensus 354 ~n~~~~l~ 361 (401)
T 4fdw_A 354 GTTPPQVF 361 (401)
T ss_dssp CSSCCBCC
T ss_pred CCCCcccc
Confidence 88776433
No 386
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.65 E-value=1.6e-18 Score=187.99 Aligned_cols=61 Identities=10% Similarity=-0.021 Sum_probs=39.5
Q ss_pred CCCCCEEECcCCcCCCC-CCcchhCCCCCCeEeCCCCccccccCC--CCccCCcchhcccCccc
Q 047800 205 LSNNNTLNLSNNNLSGA-IPISLEKLSYLDDLDLSFNKLEGEILR--GGSFGNFLVELFEGNKL 265 (547)
Q Consensus 205 l~~L~~L~l~~N~l~~~-~~~~~~~l~~L~~l~l~~N~l~~~~~~--~~~~~~l~~l~l~~N~~ 265 (547)
+++|+.|+|++|++++. ++..+..+++|+.|++++|+++..... ...+.+++.+++.+|++
T Consensus 462 ~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~i 525 (592)
T 3ogk_B 462 SPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRA 525 (592)
T ss_dssp CTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBC
T ss_pred CccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcC
Confidence 67777777777777642 344556677777777777776532111 13466777777777774
No 387
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.62 E-value=1.4e-15 Score=136.97 Aligned_cols=108 Identities=31% Similarity=0.383 Sum_probs=69.5
Q ss_pred CcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCee
Q 047800 12 LEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRNLNEL 91 (547)
Q Consensus 12 L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 91 (547)
.+.|++++|+|+. +|..+ .++|++|+|++|+|+ +..|..|.++++|++|+|++|+|+++.+..|.++++|++|
T Consensus 11 ~~~l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~i~----~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L 83 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGI--PTTTQVLYLYDNQIT----KLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQL 83 (170)
T ss_dssp TTEEECTTSCCSS-CCSCC--CTTCSEEECCSSCCC----CCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCEEEeCCCCcCc-cCccC--CCCCcEEEcCCCcCC----ccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEE
Confidence 4566777777664 34333 256667777777766 3445566666677777777777776666666666777777
Q ss_pred eccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCC
Q 047800 92 ALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGIL 131 (547)
Q Consensus 92 ~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 131 (547)
+|++|+|+++++. .|..+++|++|+|++|++++..
T Consensus 84 ~L~~N~l~~~~~~-----~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 84 SLNDNQLKSIPRG-----AFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp ECCSSCCCCCCTT-----TTTTCTTCCEEECCSSCBCTTB
T ss_pred ECCCCccCEeCHH-----HhcCCCCCCEEEeCCCCCCCCc
Confidence 7777777666665 5666666666666666666543
No 388
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.61 E-value=2.4e-18 Score=159.34 Aligned_cols=89 Identities=20% Similarity=0.246 Sum_probs=56.8
Q ss_pred hcCCCCCCEEEcccccCCCCCCCCCCc------cccCCCCCcEEEccCCcccccCCccccCCCCCCeeeccccccccccC
Q 047800 30 IFNLSTLKHLELYNNSLSGSLSGTIPR------FIFNSSKLSILSLAKNSFSSFIPNTFGNLRNLNELALHNNYLTSSTL 103 (547)
Q Consensus 30 ~~~l~~L~~L~L~~N~l~~~~~~~~p~------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~ 103 (547)
+.....++.++++.|.++ |.+|. .+..+++|++|+|++|+|++ +| .|.++++|++|+|++|+|+.++.
T Consensus 14 ~~~~~~l~~l~l~~~~l~----~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~l~~ 87 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELH----GMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKKIEN 87 (198)
T ss_dssp HHHTTCCCCTTCSEEECC----BCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECSCSS
T ss_pred HHhcccccCcchheeEec----cccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcccccc
Confidence 556677777778877777 45554 66666777777777777776 44 66667777777777777665543
Q ss_pred chhhHhhhcCCCCCcEEeCcCCCCCCC
Q 047800 104 ELSFLSLLLNCKSLTHIGLSNNPLDGI 130 (547)
Q Consensus 104 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 130 (547)
.+..+++|++|+|++|+|+++
T Consensus 88 ------~~~~~~~L~~L~L~~N~l~~l 108 (198)
T 1ds9_A 88 ------LDAVADTLEELWISYNQIASL 108 (198)
T ss_dssp ------HHHHHHHCSEEEEEEEECCCH
T ss_pred ------hhhcCCcCCEEECcCCcCCcC
Confidence 233345555555555555543
No 389
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.61 E-value=3e-15 Score=135.28 Aligned_cols=107 Identities=31% Similarity=0.339 Sum_probs=66.7
Q ss_pred cEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCeee
Q 047800 13 EYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRNLNELA 92 (547)
Q Consensus 13 ~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 92 (547)
+.+++++|+|+ .+|..+. ++|++|+|++|+|+ +..|..|.++++|++|+|++|+|+++.+..|.++++|++|+
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~----~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~ 87 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQIT----KLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLD 87 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCC----CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCcc----ccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEE
Confidence 56666666665 3344332 56666666666666 34455666666666666666666665555566666666666
Q ss_pred ccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCC
Q 047800 93 LHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGIL 131 (547)
Q Consensus 93 L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 131 (547)
|++|+|+++++. .|..+++|++|+|++|++....
T Consensus 88 L~~N~l~~l~~~-----~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 88 LNDNHLKSIPRG-----AFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp CCSSCCCCCCTT-----TTTTCTTCSEEECCSSCBCTTB
T ss_pred CCCCccceeCHH-----HhccccCCCEEEeCCCCccccc
Confidence 666666666654 5666666666666666666543
No 390
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.61 E-value=3.2e-15 Score=134.56 Aligned_cols=106 Identities=25% Similarity=0.319 Sum_probs=82.8
Q ss_pred CCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCeeeccccccccccCchhhHhhhcCCC
Q 047800 36 LKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRNLNELALHNNYLTSSTLELSFLSLLLNCK 115 (547)
Q Consensus 36 L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~ 115 (547)
.+.|++++|+|+ .+|..+. ++|++|+|++|+|+++.|..|.++++|++|+|++|+|+++++. .|.+++
T Consensus 11 ~~~l~~s~n~l~-----~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~-----~f~~l~ 78 (170)
T 3g39_A 11 GTTVDCSGKSLA-----SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAG-----VFDKLT 78 (170)
T ss_dssp TTEEECTTSCCS-----SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTT-----TTTTCT
T ss_pred CCEEEeCCCCcC-----ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChh-----hccCCC
Confidence 467888888888 6777653 7788888888888887788888888888888888888888776 677888
Q ss_pred CCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCCC
Q 047800 116 SLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTG 166 (547)
Q Consensus 116 ~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~ 166 (547)
+|++|+|++|+|+++++.. +.+++ +|++|+|++|.++.
T Consensus 79 ~L~~L~L~~N~l~~~~~~~-~~~l~------------~L~~L~L~~N~~~c 116 (170)
T 3g39_A 79 QLTQLSLNDNQLKSIPRGA-FDNLK------------SLTHIWLLNNPWDC 116 (170)
T ss_dssp TCCEEECCSSCCCCCCTTT-TTTCT------------TCCEEECCSSCBCT
T ss_pred CCCEEECCCCccCEeCHHH-hcCCC------------CCCEEEeCCCCCCC
Confidence 8888888888887776655 44455 77777777777764
No 391
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.60 E-value=4e-17 Score=176.88 Aligned_cols=42 Identities=19% Similarity=0.143 Sum_probs=22.7
Q ss_pred CCCcchhcCCCCCEEECcCCcCCCCCC-cchhCCCCCCeEeCC
Q 047800 197 SIPESFGDLSNNNTLNLSNNNLSGAIP-ISLEKLSYLDDLDLS 238 (547)
Q Consensus 197 ~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~l~l~ 238 (547)
.+|..+..+++|+.|+|++|.+++... ..+..+++|+.|+++
T Consensus 284 ~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~ 326 (592)
T 3ogk_B 284 EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR 326 (592)
T ss_dssp TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE
T ss_pred HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc
Confidence 445555556666666666666543222 224555666666665
No 392
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.59 E-value=5.2e-15 Score=133.73 Aligned_cols=104 Identities=25% Similarity=0.313 Sum_probs=79.7
Q ss_pred CEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCeeeccccccccccCchhhHhhhcCCCC
Q 047800 37 KHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRNLNELALHNNYLTSSTLELSFLSLLLNCKS 116 (547)
Q Consensus 37 ~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~ 116 (547)
+.+++++|+|+ .+|..+. ++|++|+|++|+|+++.|..|.++++|++|+|++|+|+++++. .|.++++
T Consensus 15 ~~l~~~~n~l~-----~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~-----~~~~l~~ 82 (174)
T 2r9u_A 15 TLVNCQNIRLA-----SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTG-----VFDKLTQ 82 (174)
T ss_dssp SEEECCSSCCS-----SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT-----TTTTCTT
T ss_pred cEEEeCCCCCC-----ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChh-----HhCCcch
Confidence 67888888887 7777664 7788888888888887788888888888888888888887776 6777778
Q ss_pred CcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCC
Q 047800 117 LTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLT 165 (547)
Q Consensus 117 L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~ 165 (547)
|++|+|++|+|+++++.. +..++ +|++|+|++|.+.
T Consensus 83 L~~L~L~~N~l~~l~~~~-~~~l~------------~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 83 LTQLDLNDNHLKSIPRGA-FDNLK------------SLTHIYLYNNPWD 118 (174)
T ss_dssp CCEEECCSSCCCCCCTTT-TTTCT------------TCSEEECCSSCBC
T ss_pred hhEEECCCCccceeCHHH-hcccc------------CCCEEEeCCCCcc
Confidence 888888888877776654 44444 7777777777776
No 393
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.51 E-value=4.2e-15 Score=145.21 Aligned_cols=89 Identities=15% Similarity=0.029 Sum_probs=72.5
Q ss_pred cccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCCc
Q 047800 321 SPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMV 400 (547)
Q Consensus 321 v~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~~ 400 (547)
+++.+++. .+..++||||+++|+|.+ +.. .+...++.|++.||+||| +.+|+||||||+||+++ ++.
T Consensus 164 ~~v~~~~~-~~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NILl~-~~~ 230 (282)
T 1zar_A 164 LAVPKVYA-WEGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVS-EEG 230 (282)
T ss_dssp SSSCCEEE-EETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEE-TTE
T ss_pred CCcCeEEe-ccceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHEEEE-CCc
Confidence 55666543 355799999999999998 432 224579999999999999 99999999999999999 999
Q ss_pred EEEcccCCcccCCCCCcccccccCCCCCCCCCCCC
Q 047800 401 AHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGR 435 (547)
Q Consensus 401 ~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~ 435 (547)
+||+|||+|+. +..++|||++.
T Consensus 231 vkl~DFG~a~~-------------~~~~~a~e~l~ 252 (282)
T 1zar_A 231 IWIIDFPQSVE-------------VGEEGWREILE 252 (282)
T ss_dssp EEECCCTTCEE-------------TTSTTHHHHHH
T ss_pred EEEEECCCCeE-------------CCCCCHHHHHH
Confidence 99999999863 33467788764
No 394
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.49 E-value=8e-16 Score=166.66 Aligned_cols=250 Identities=14% Similarity=0.141 Sum_probs=136.5
Q ss_pred CCCCCCcEEEccCCccccCCChhhc----CCCCCCEEEccccc--CCCCCCCCCCccccCCCCCcEEEccCC-c------
Q 047800 7 GNLHNLEYLGFGHNKLVGVVPATIF----NLSTLKHLELYNNS--LSGSLSGTIPRFIFNSSKLSILSLAKN-S------ 73 (547)
Q Consensus 7 ~~l~~L~~L~Ls~N~i~~~~~~~~~----~l~~L~~L~L~~N~--l~~~~~~~~p~~~~~l~~L~~L~Ls~N-~------ 73 (547)
.++++|++|+|++|.+++..+..+. .+++|++|+|++|. ++. ..++..+.++++|+.|+|++| .
T Consensus 153 ~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~---~~l~~l~~~~~~L~~L~L~~~~~~~~l~~ 229 (594)
T 2p1m_B 153 ATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSF---SALERLVTRCPNLKSLKLNRAVPLEKLAT 229 (594)
T ss_dssp HHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCH---HHHHHHHHHCTTCCEEECCTTSCHHHHHH
T ss_pred HhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCH---HHHHHHHHhCCCCcEEecCCCCcHHHHHH
Confidence 4678888888888887765544443 55677788877775 220 112222234566666666665 1
Q ss_pred -------------------------------------------cccc----CCccccCCCCCCeeeccccccccccCchh
Q 047800 74 -------------------------------------------FSSF----IPNTFGNLRNLNELALHNNYLTSSTLELS 106 (547)
Q Consensus 74 -------------------------------------------l~~~----~~~~~~~l~~L~~L~L~~N~i~~~~~~~~ 106 (547)
+... ++..+..+++|++|+|++|.++....
T Consensus 230 ~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l--- 306 (594)
T 2p1m_B 230 LLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDL--- 306 (594)
T ss_dssp HHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHH---
T ss_pred HHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHH---
Confidence 1111 22222356888888888887654321
Q ss_pred hHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCc------------------ch---hhhc-cccCCcccEEEccCCcC
Q 047800 107 FLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSH------------------SL---EFFV-MSYCNDILYLDLSSNFL 164 (547)
Q Consensus 107 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~------------------~~---~~~~-~~~~~~L~~L~ls~N~l 164 (547)
...+..+++|++|++++| ++......+...++. .+ .... ...|++|++|+++.|.+
T Consensus 307 -~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l 384 (594)
T 2p1m_B 307 -VKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQM 384 (594)
T ss_dssp -HHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCC
T ss_pred -HHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCc
Confidence 224567778888888777 321110100111110 00 0001 12466788887777777
Q ss_pred CCCCCcCCC-CCccccccccccccccCccccCCC-----CCcchhcCCCCCEEECcCCcCCCCCCcchhC-CCCCCeEeC
Q 047800 165 TGPLPLEIG-NLKGLVGVDFSMNNFSGYNKLQGS-----IPESFGDLSNNNTLNLSNNNLSGAIPISLEK-LSYLDDLDL 237 (547)
Q Consensus 165 ~~~~p~~~~-~l~~L~~L~ls~N~~~~~n~l~~~-----~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-l~~L~~l~l 237 (547)
++.....+. .+++|+.|+++.|...+-+.+++. ++..+..+++|+.|+|++ .++...+..+.. +++|+.|++
T Consensus 385 ~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L 463 (594)
T 2p1m_B 385 TNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSV 463 (594)
T ss_dssp CHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEE
T ss_pred CHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeec
Confidence 755444443 467788888873221111111211 112256677788888866 555444444444 777888888
Q ss_pred CCCccccccCCC--CccCCcchhcccCccc
Q 047800 238 SFNKLEGEILRG--GSFGNFLVELFEGNKL 265 (547)
Q Consensus 238 ~~N~l~~~~~~~--~~~~~l~~l~l~~N~~ 265 (547)
++|.+++..... ..+.+++.+++.+|++
T Consensus 464 ~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~ 493 (594)
T 2p1m_B 464 AFAGDSDLGMHHVLSGCDSLRKLEIRDCPF 493 (594)
T ss_dssp ESCCSSHHHHHHHHHHCTTCCEEEEESCSC
T ss_pred cCCCCcHHHHHHHHhcCCCcCEEECcCCCC
Confidence 887775432211 3366777777777765
No 395
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.48 E-value=5.3e-14 Score=141.81 Aligned_cols=107 Identities=22% Similarity=0.207 Sum_probs=93.4
Q ss_pred cEEEccCC-ccccCCChhhcCCCCCCEEEccc-ccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCe
Q 047800 13 EYLGFGHN-KLVGVVPATIFNLSTLKHLELYN-NSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRNLNE 90 (547)
Q Consensus 13 ~~L~Ls~N-~i~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 90 (547)
..++++++ +|+. +|. |..+++|++|+|++ |+|+ +..|..|.++++|+.|+|++|+|+++.|..|.++++|+.
T Consensus 11 ~~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~----~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 84 (347)
T 2ifg_A 11 SGLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQ----HLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSR 84 (347)
T ss_dssp SCEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCC----EECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCE
T ss_pred CEEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCC----CcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCE
Confidence 46799998 8985 566 99999999999996 9999 444578889999999999999999999999999999999
Q ss_pred eeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCC
Q 047800 91 LALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGIL 131 (547)
Q Consensus 91 L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 131 (547)
|+|++|+|+++++. .|..++ |+.|+|++|++.+.-
T Consensus 85 L~l~~N~l~~~~~~-----~~~~~~-L~~l~l~~N~~~c~c 119 (347)
T 2ifg_A 85 LNLSFNALESLSWK-----TVQGLS-LQELVLSGNPLHCSC 119 (347)
T ss_dssp EECCSSCCSCCCST-----TTCSCC-CCEEECCSSCCCCCG
T ss_pred EeCCCCccceeCHH-----HcccCC-ceEEEeeCCCccCCC
Confidence 99999999999887 677666 999999999998653
No 396
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.48 E-value=2.4e-16 Score=170.82 Aligned_cols=109 Identities=12% Similarity=0.060 Sum_probs=78.9
Q ss_pred cCCcccEEEcc--C----CcCCCCCC-----cCCCCCccccccccccccccCccccCCCCCcchhc-CCCCCEEECcCCc
Q 047800 150 YCNDILYLDLS--S----NFLTGPLP-----LEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGD-LSNNNTLNLSNNN 217 (547)
Q Consensus 150 ~~~~L~~L~ls--~----N~l~~~~p-----~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~-l~~L~~L~l~~N~ 217 (547)
.|++|+.|+++ + |.++.... ..+.++++|+.|++++ .+ ++..+..+.. +++|+.|+|++|.
T Consensus 395 ~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l------~~~~~~~l~~~~~~L~~L~L~~~~ 467 (594)
T 2p1m_B 395 NRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LL------TDKVFEYIGTYAKKMEMLSVAFAG 467 (594)
T ss_dssp HCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SC------CHHHHHHHHHHCTTCCEEEEESCC
T ss_pred hCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cc------cHHHHHHHHHhchhccEeeccCCC
Confidence 35699999999 4 56663221 1256678999999977 45 3333445554 8899999999999
Q ss_pred CCCCCCcch-hCCCCCCeEeCCCCccccccCC--CCccCCcchhcccCccc
Q 047800 218 LSGAIPISL-EKLSYLDDLDLSFNKLEGEILR--GGSFGNFLVELFEGNKL 265 (547)
Q Consensus 218 l~~~~~~~~-~~l~~L~~l~l~~N~l~~~~~~--~~~~~~l~~l~l~~N~~ 265 (547)
+++..+..+ ..+++|+.|++++|+++..... ...+.+++.+++.+|+.
T Consensus 468 i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 468 DSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp SSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred CcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 976655555 6789999999999999643222 24577899999998875
No 397
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.47 E-value=3.9e-16 Score=158.68 Aligned_cols=198 Identities=17% Similarity=0.112 Sum_probs=100.1
Q ss_pred CCCCEEEcccccCCCCCCCCCCcccc-CCCCCcEEEccCCcccccCCccc-cCCCCCCeeeccccccccccCchhhHhhh
Q 047800 34 STLKHLELYNNSLSGSLSGTIPRFIF-NSSKLSILSLAKNSFSSFIPNTF-GNLRNLNELALHNNYLTSSTLELSFLSLL 111 (547)
Q Consensus 34 ~~L~~L~L~~N~l~~~~~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~L~~N~i~~~~~~~~~~~~~ 111 (547)
++|++|+|++|.|++.....+...+. ..++|++|+|++|.|+......+ ..+++|++|+|++|.|+..... .+...+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~-~L~~~L 150 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACK-DLRDLL 150 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHH-HHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHH-HHHHHH
Confidence 45666666666665211111222222 12466666666666654322222 2345666666666666544332 111122
Q ss_pred -cCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCCCCC----CcCCCCCccccccccccc
Q 047800 112 -LNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGPL----PLEIGNLKGLVGVDFSMN 186 (547)
Q Consensus 112 -~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~~~----p~~~~~l~~L~~L~ls~N 186 (547)
...++|++|+|++|.|+......+. ..+..+++|++|+|++|.|+... +..+...++|+.|+|++|
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~---------~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N 221 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLM---------EGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYN 221 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHH---------HHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSS
T ss_pred HhcCCccceeeCCCCCCChHHHHHHH---------HHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCC
Confidence 2455666666766666543221110 01122336667777777665321 334455567777777777
Q ss_pred cccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCC-----CCeEe--CCCCccc
Q 047800 187 NFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSY-----LDDLD--LSFNKLE 243 (547)
Q Consensus 187 ~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~-----L~~l~--l~~N~l~ 243 (547)
.|++.. ...++..+..+++|++|+|++|.|+......+..+.. |+.+. +..|.+.
T Consensus 222 ~i~~~g--~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 222 GAGDTA--ALALARAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVS 283 (372)
T ss_dssp CCCHHH--HHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC----CH
T ss_pred CCCHHH--HHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCccC
Confidence 763100 0123345666788999999999988655555544422 55555 5555544
No 398
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.42 E-value=4.8e-13 Score=134.76 Aligned_cols=105 Identities=19% Similarity=0.232 Sum_probs=87.9
Q ss_pred CEEEcccc-cCCCCCCCCCCccccCCCCCcEEEccC-CcccccCCccccCCCCCCeeeccccccccccCchhhHhhhcCC
Q 047800 37 KHLELYNN-SLSGSLSGTIPRFIFNSSKLSILSLAK-NSFSSFIPNTFGNLRNLNELALHNNYLTSSTLELSFLSLLLNC 114 (547)
Q Consensus 37 ~~L~L~~N-~l~~~~~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l 114 (547)
..++++++ +|+ .+|. +..+++|++|+|++ |+|+++.+..|.+|++|++|+|++|+|+++++. .|.++
T Consensus 11 ~~v~~~~~n~l~-----~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-----~~~~l 79 (347)
T 2ifg_A 11 SGLRCTRDGALD-----SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPD-----AFHFT 79 (347)
T ss_dssp SCEECCSSCCCT-----TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTT-----GGGSC
T ss_pred CEEEcCCCCCCC-----ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHH-----HhcCC
Confidence 35688887 888 7888 88889999999996 999998888899999999999999999998887 78899
Q ss_pred CCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCCC
Q 047800 115 KSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTG 166 (547)
Q Consensus 115 ~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~ 166 (547)
++|++|+|++|+|+++++.. +..+ .|+.|+|++|.+..
T Consensus 80 ~~L~~L~l~~N~l~~~~~~~-~~~~-------------~L~~l~l~~N~~~c 117 (347)
T 2ifg_A 80 PRLSRLNLSFNALESLSWKT-VQGL-------------SLQELVLSGNPLHC 117 (347)
T ss_dssp SCCCEEECCSSCCSCCCSTT-TCSC-------------CCCEEECCSSCCCC
T ss_pred cCCCEEeCCCCccceeCHHH-cccC-------------CceEEEeeCCCccC
Confidence 99999999999998887765 3222 38888888888873
No 399
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.41 E-value=1.3e-15 Score=154.76 Aligned_cols=170 Identities=20% Similarity=0.186 Sum_probs=121.8
Q ss_pred CCCCcEEEccCCcccccCCccccC-----CCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCccc
Q 047800 61 SSKLSILSLAKNSFSSFIPNTFGN-----LRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTY 135 (547)
Q Consensus 61 l~~L~~L~Ls~N~l~~~~~~~~~~-----l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 135 (547)
+++|+.|+|++|.|+......|.. .++|++|+|++|.|+..... .....+.+|+.|+|++|+|+......+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~----~l~~~L~~L~~L~Ls~n~l~~~~~~~L 146 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLR----TLLPVFLRARKLGLQLNSLGPEACKDL 146 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHH----HTHHHHHTEEEEECCSSCCCHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHH----HHHHHHHhccHhhcCCCCCCHHHHHHH
Confidence 478999999999998755554443 37999999999998754432 122345689999999999976544332
Q ss_pred ccccCcchhhhccccCCcccEEEccCCcCCCC----CCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEE
Q 047800 136 MGNLSHSLEFFVMSYCNDILYLDLSSNFLTGP----LPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTL 211 (547)
Q Consensus 136 ~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L 211 (547)
...+ ...+.+|++|+|++|.|+.. ++..+..+++|++|+|++|.+++.. ...+++.+..+++|++|
T Consensus 147 ~~~L--------~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g--~~~L~~~L~~~~~L~~L 216 (372)
T 3un9_A 147 RDLL--------LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEG--LELLAAQLDRNRQLQEL 216 (372)
T ss_dssp HHHH--------HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHH--HHHHHHHGGGCSCCCEE
T ss_pred HHHH--------HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHH--HHHHHHHHhcCCCcCeE
Confidence 1111 01234899999999999742 2334467889999999999985210 01234567788899999
Q ss_pred ECcCCcCCCC----CCcchhCCCCCCeEeCCCCcccc
Q 047800 212 NLSNNNLSGA----IPISLEKLSYLDDLDLSFNKLEG 244 (547)
Q Consensus 212 ~l~~N~l~~~----~~~~~~~l~~L~~l~l~~N~l~~ 244 (547)
+|++|.|+.. ++.++...++|+.|||++|.|+.
T Consensus 217 ~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 217 NVAYNGAGDTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp ECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred ECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 9999999853 33456677999999999999874
No 400
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.26 E-value=4.8e-11 Score=122.30 Aligned_cols=221 Identities=14% Similarity=0.130 Sum_probs=114.2
Q ss_pred cccCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCC-ccccCCCCCcEEEccCC----------
Q 047800 4 PEIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIP-RFIFNSSKLSILSLAKN---------- 72 (547)
Q Consensus 4 ~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p-~~~~~l~~L~~L~Ls~N---------- 72 (547)
.+|.++.+|+.+.|..+ ++.+...+|.++++|+.++|..| ++ .++ .+|.++.+|+.+.+..+
T Consensus 65 ~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~-----~I~~~aF~~c~~L~~i~~p~~l~~i~~~aF~ 137 (394)
T 4fs7_A 65 AAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VK-----MIGRCTFSGCYALKSILLPLMLKSIGVEAFK 137 (394)
T ss_dssp TTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CC-----EECTTTTTTCTTCCCCCCCTTCCEECTTTTT
T ss_pred HHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ce-----EccchhhcccccchhhcccCceeeecceeee
Confidence 46888889999999754 77788888999999999998755 44 332 23445555555444322
Q ss_pred -----------cccccCCccccCCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccc---
Q 047800 73 -----------SFSSFIPNTFGNLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGN--- 138 (547)
Q Consensus 73 -----------~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~--- 138 (547)
.+..+...+|.++++|+.+.+.++ +..+... +|.+|.+|+.+++..| ++.+...+|...
T Consensus 138 ~~~~~~~~~~~~~~~i~~~aF~~c~~L~~i~l~~~-~~~I~~~-----~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L 210 (394)
T 4fs7_A 138 GCDFKEITIPEGVTVIGDEAFATCESLEYVSLPDS-METLHNG-----LFSGCGKLKSIKLPRN-LKIIRDYCFAECILL 210 (394)
T ss_dssp TCCCSEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTT-----TTTTCTTCCBCCCCTT-CCEECTTTTTTCTTC
T ss_pred cccccccccCccccccchhhhcccCCCcEEecCCc-cceeccc-----cccCCCCceEEEcCCC-ceEeCchhhcccccc
Confidence 111223345566666666666544 3334444 5666666666666554 333333332110
Q ss_pred ---------------------c--------CcchhhhccccCCcccEEEccCCcCCCCCCcCCCCCcccccccccccccc
Q 047800 139 ---------------------L--------SHSLEFFVMSYCNDILYLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFS 189 (547)
Q Consensus 139 ---------------------l--------~~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~~ 189 (547)
+ ...+....|.+|..|+.+.+..+..+ +....|.++..++.+....+.+.
T Consensus 211 ~~i~~~~~~~~i~~~~~~~~~l~~i~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~ 289 (394)
T 4fs7_A 211 ENMEFPNSLYYLGDFALSKTGVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP 289 (394)
T ss_dssp CBCCCCTTCCEECTTTTTTCCCCEEEECTTCCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC
T ss_pred ceeecCCCceEeehhhcccCCCceEEECCCceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec
Confidence 0 01122234556666666666665443 44445555555544444333221
Q ss_pred Cc--------------cccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCC
Q 047800 190 GY--------------NKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFN 240 (547)
Q Consensus 190 ~~--------------n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N 240 (547)
.. +.++.....+|.+|.+|+.++|.++ ++.....+|.++.+|+.+++..|
T Consensus 290 ~~~F~~~~~L~~i~l~~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 290 EKTFYGCSSLTEVKLLDSVKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp TTTTTTCTTCCEEEECTTCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT
T ss_pred cccccccccccccccccccceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc
Confidence 00 1112223344555555555555433 44344445555555555555444
No 401
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.14 E-value=4.8e-11 Score=114.84 Aligned_cols=74 Identities=20% Similarity=0.212 Sum_probs=60.4
Q ss_pred ceeEEEEeccCC-C----ChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCCcEEEcc
Q 047800 331 EFKALILEYKPH-G----SLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSD 405 (547)
Q Consensus 331 ~~~~lv~ey~~~-g----sL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~~~kl~D 405 (547)
...++||||+.+ | +|.++... .++..+..++.|++.|+.|||. +.+|+||||||+|||++. .++|+|
T Consensus 141 ~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~--~~givHrDlkp~NILl~~--~~~liD 212 (258)
T 1zth_A 141 MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQ--EAELVHADLSEYNIMYID--KVYFID 212 (258)
T ss_dssp ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHH--TSCEECSSCSTTSEEESS--SEEECC
T ss_pred CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHH--HCCEEeCCCCHHHEEEcC--cEEEEE
Confidence 356899999942 4 67766543 2345678899999999999994 579999999999999998 999999
Q ss_pred cCCcccC
Q 047800 406 FGIAKTG 412 (547)
Q Consensus 406 fg~a~~~ 412 (547)
||+|...
T Consensus 213 FG~a~~~ 219 (258)
T 1zth_A 213 MGQAVTL 219 (258)
T ss_dssp CTTCEET
T ss_pred CcccccC
Confidence 9999653
No 402
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.07 E-value=2.2e-09 Score=109.86 Aligned_cols=110 Identities=7% Similarity=0.118 Sum_probs=75.0
Q ss_pred hccccCCcccEEEccCCcCCCCCCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcc
Q 047800 146 FVMSYCNDILYLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPIS 225 (547)
Q Consensus 146 ~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~ 225 (547)
..|.+|..|+.+.+..+..+ +....|.++++|+.+.+..+ + +.....+|.+|.+|+.++|..+ ++.....+
T Consensus 259 ~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~~~-i------~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~a 329 (394)
T 4gt6_A 259 HAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFSSR-I------TELPESVFAGCISLKSIDIPEG-ITQILDDA 329 (394)
T ss_dssp TTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECCTT-C------CEECTTTTTTCTTCCEEECCTT-CCEECTTT
T ss_pred ceeeecccccEEecccccce-ecCcccccccccccccCCCc-c------cccCceeecCCCCcCEEEeCCc-ccEehHhH
Confidence 45788888888888776654 66778888888888888633 3 2344567888888888888765 55566678
Q ss_pred hhCCCCCCeEeCCCCccccccCCC-CccCCcchhcccCccc
Q 047800 226 LEKLSYLDDLDLSFNKLEGEILRG-GSFGNFLVELFEGNKL 265 (547)
Q Consensus 226 ~~~l~~L~~l~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~ 265 (547)
|.++.+|+.+.+..+ ++...... ..+.+|..+.+.++..
T Consensus 330 F~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 330 FAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp TTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHH
T ss_pred hhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCcee
Confidence 888888888888655 44322222 3345666677776654
No 403
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.06 E-value=8.8e-10 Score=112.85 Aligned_cols=210 Identities=15% Similarity=0.165 Sum_probs=132.3
Q ss_pred ccCCCCCCcEEEccCCccccCCChhhcCCCCCCEEEcccccCCCCCCCCCC-ccccCCCCCcEEEccCCcccccCCcccc
Q 047800 5 EIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNSLSGSLSGTIP-RFIFNSSKLSILSLAKNSFSSFIPNTFG 83 (547)
Q Consensus 5 ~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 83 (547)
+|.++++|+.+.|.++. ..+...+|.++++|+.+++..| ++ .++ ..|.+...|+.+.+..+... +.+.+.
T Consensus 157 aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~-----~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~ 227 (394)
T 4fs7_A 157 AFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LK-----IIRDYCFAECILLENMEFPNSLYY--LGDFAL 227 (394)
T ss_dssp TTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CC-----EECTTTTTTCTTCCBCCCCTTCCE--ECTTTT
T ss_pred hhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ce-----EeCchhhccccccceeecCCCceE--eehhhc
Confidence 45555666666665443 3355555666666666666554 33 222 23445555555555444322 122223
Q ss_pred CCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccC---------cchhhhccccCCcc
Q 047800 84 NLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLS---------HSLEFFVMSYCNDI 154 (547)
Q Consensus 84 ~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~---------~~~~~~~~~~~~~L 154 (547)
...+|+.+.+..+ ++.+... +|.++..|+.+.+..|.. .+....|. +.. ..+....|..|.+|
T Consensus 228 ~~~~l~~i~ip~~-~~~i~~~-----~f~~~~~l~~~~~~~~~~-~i~~~~F~-~~~~l~~~~~~~~~i~~~~F~~~~~L 299 (394)
T 4fs7_A 228 SKTGVKNIIIPDS-FTELGKS-----VFYGCTDLESISIQNNKL-RIGGSLFY-NCSGLKKVIYGSVIVPEKTFYGCSSL 299 (394)
T ss_dssp TTCCCCEEEECTT-CCEECSS-----TTTTCSSCCEEEECCTTC-EECSCTTT-TCTTCCEEEECSSEECTTTTTTCTTC
T ss_pred ccCCCceEEECCC-ceecccc-----cccccccceeEEcCCCcc-eeeccccc-cccccceeccCceeeccccccccccc
Confidence 3344555554322 3334444 677777777777776643 33333321 111 12334467888899
Q ss_pred cEEEccCCcCCCCCCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCe
Q 047800 155 LYLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDD 234 (547)
Q Consensus 155 ~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 234 (547)
+.+.+..+ ++.+....|.++++|+.+++..+ + +.....+|.+|.+|+.+++..| ++.....+|.++++|+.
T Consensus 300 ~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v------~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~ 370 (394)
T 4fs7_A 300 TEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-V------EEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKK 370 (394)
T ss_dssp CEEEECTT-CCEECTTTTTTCTTCCEECCCTT-C------CEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCE
T ss_pred cccccccc-cceechhhhcCCCCCCEEEeCCc-c------cEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCE
Confidence 99999876 66677889999999999999754 4 3355678999999999999887 77677889999999999
Q ss_pred EeCCCC
Q 047800 235 LDLSFN 240 (547)
Q Consensus 235 l~l~~N 240 (547)
+++..+
T Consensus 371 i~lp~~ 376 (394)
T 4fs7_A 371 VELPKR 376 (394)
T ss_dssp EEEEGG
T ss_pred EEECCC
Confidence 998754
No 404
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=99.03 E-value=3.6e-11 Score=121.12 Aligned_cols=196 Identities=15% Similarity=0.099 Sum_probs=113.7
Q ss_pred hhhcCCCCCCEEEcccccCCC-----CCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCeeecccccccccc
Q 047800 28 ATIFNLSTLKHLELYNNSLSG-----SLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRNLNELALHNNYLTSST 102 (547)
Q Consensus 28 ~~~~~l~~L~~L~L~~N~l~~-----~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~ 102 (547)
.+...+++|+.|.+..+.... ...+.++..+..+++|+.|+|++|.-.. ++. +. +++|+.|+|..|.+....
T Consensus 133 ~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l~-l~~-~~-~~~L~~L~L~~~~l~~~~ 209 (362)
T 2ra8_A 133 ENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLS-IGK-KP-RPNLKSLEIISGGLPDSV 209 (362)
T ss_dssp TTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTCB-CCS-CB-CTTCSEEEEECSBCCHHH
T ss_pred HhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCce-ecc-cc-CCCCcEEEEecCCCChHH
Confidence 345567778888776653321 0012344455567888888888773112 222 33 788888888887765432
Q ss_pred CchhhHhhhc--CCCCCcEEeCcC--CCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCCCCCCcCC---CCC
Q 047800 103 LELSFLSLLL--NCKSLTHIGLSN--NPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGPLPLEI---GNL 175 (547)
Q Consensus 103 ~~~~~~~~~~--~l~~L~~L~Ls~--N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~---~~l 175 (547)
.. .+. .+++|++|+|+. |...+-.. ...+. .......+++|++|+|++|.+....+..+ ..+
T Consensus 210 l~-----~l~~~~lp~L~~L~L~~~~~~~~~~~~---~~~l~---~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~ 278 (362)
T 2ra8_A 210 VE-----DILGSDLPNLEKLVLYVGVEDYGFDGD---MNVFR---PLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDIL 278 (362)
T ss_dssp HH-----HHHHSBCTTCCEEEEECBCGGGTCCSC---GGGTG---GGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSG
T ss_pred HH-----HHHHccCCCCcEEEEeccccccccchh---HHHHH---HHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccC
Confidence 22 332 678888888753 22111100 00000 00111235589999998888864322222 257
Q ss_pred ccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhC-CCCCCeEeCCCCc
Q 047800 176 KGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEK-LSYLDDLDLSFNK 241 (547)
Q Consensus 176 ~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-l~~L~~l~l~~N~ 241 (547)
++|+.|+|+.|.+.+.. ...++..+..+++|+.|+|++|.++...-..+.. + ...++++.|+
T Consensus 279 ~~L~~LdLs~n~L~d~G--~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 279 PQLETMDISAGVLTDEG--ARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp GGCSEEECCSSCCBHHH--HHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred CCCCEEECCCCCCChHH--HHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 88999999998874210 0012334466789999999999987554444543 3 3668999887
No 405
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=99.01 E-value=4.5e-11 Score=120.39 Aligned_cols=186 Identities=14% Similarity=0.094 Sum_probs=107.1
Q ss_pred CCCCEEEcccccCCC-CC---CCCCCccccCCCCCcEEEccCCccc---------ccCCccccCCCCCCeeecccccccc
Q 047800 34 STLKHLELYNNSLSG-SL---SGTIPRFIFNSSKLSILSLAKNSFS---------SFIPNTFGNLRNLNELALHNNYLTS 100 (547)
Q Consensus 34 ~~L~~L~L~~N~l~~-~~---~~~~p~~~~~l~~L~~L~Ls~N~l~---------~~~~~~~~~l~~L~~L~L~~N~i~~ 100 (547)
+.++.|.+......+ .. ...+..+...+++|+.|.+..+... +.++..+..+|+|+.|+|++|.-..
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l~ 186 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLS 186 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTCB
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCce
Confidence 346667766554330 00 0012233446678888888765431 1134456678888899888873112
Q ss_pred ccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhccccCCcccEEEccC--CcCCCC-----CCcCC-
Q 047800 101 STLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSS--NFLTGP-----LPLEI- 172 (547)
Q Consensus 101 ~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~--N~l~~~-----~p~~~- 172 (547)
++ .+ .+++|++|+|..|.++.-.... .....+++|++|+|+. |...+. +...+
T Consensus 187 l~-------~~-~~~~L~~L~L~~~~l~~~~l~~-----------l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~ 247 (362)
T 2ra8_A 187 IG-------KK-PRPNLKSLEIISGGLPDSVVED-----------ILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFS 247 (362)
T ss_dssp CC-------SC-BCTTCSEEEEECSBCCHHHHHH-----------HHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSC
T ss_pred ec-------cc-cCCCCcEEEEecCCCChHHHHH-----------HHHccCCCCcEEEEeccccccccchhHHHHHHHHh
Confidence 22 22 2678888888888765322211 1112234888888863 221111 01122
Q ss_pred -CCCccccccccccccccCccccCCCCCcch---hcCCCCCEEECcCCcCCCC----CCcchhCCCCCCeEeCCCCcccc
Q 047800 173 -GNLKGLVGVDFSMNNFSGYNKLQGSIPESF---GDLSNNNTLNLSNNNLSGA----IPISLEKLSYLDDLDLSFNKLEG 244 (547)
Q Consensus 173 -~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~---~~l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~l~l~~N~l~~ 244 (547)
..+++|+.|+|++|.+.+ ..+..+ ..+++|++|+|+.|.++.. ++..+..+++|+.|++++|.+..
T Consensus 248 ~~~~p~Lr~L~L~~~~i~~------~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 248 KDRFPNLKWLGIVDAEEQN------VVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp TTTCTTCCEEEEESCTTHH------HHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred cCCCCCcCEEeCCCCCCch------HHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 246888888888887731 112222 2467888899988888753 23334567888888988888763
No 406
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.99 E-value=2.8e-11 Score=110.16 Aligned_cols=129 Identities=12% Similarity=0.133 Sum_probs=72.4
Q ss_pred ChhhcCCCCCCEEEcccc-cCCCCCCCCCCccccCCCCCcEEEccCCccccc----CCccccCCCCCCeeeccccccccc
Q 047800 27 PATIFNLSTLKHLELYNN-SLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSF----IPNTFGNLRNLNELALHNNYLTSS 101 (547)
Q Consensus 27 ~~~~~~l~~L~~L~L~~N-~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L~~N~i~~~ 101 (547)
...+...++|++|+|++| .|++.....+...+...++|++|+|++|.|+.. +...+...++|++|+|++|.|+..
T Consensus 29 ~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~ 108 (185)
T 1io0_A 29 KRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGS 108 (185)
T ss_dssp HHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHH
T ss_pred HHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHH
Confidence 344556666777777776 665332223444555556677777777776542 233344456677777777776653
Q ss_pred cCchhhHhhhcCCCCCcEEeC--cCCCCCCCCCcccccccCcchhhhccccCCcccEEEccCCcCC
Q 047800 102 TLELSFLSLLLNCKSLTHIGL--SNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLT 165 (547)
Q Consensus 102 ~~~~~~~~~~~~l~~L~~L~L--s~N~l~~~~~~~~~~~l~~~~~~~~~~~~~~L~~L~ls~N~l~ 165 (547)
... .+...+...++|++|+| ++|.|+......+. ..+..+++|++|+|++|.+.
T Consensus 109 g~~-~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~---------~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 109 GIL-ALVEALQSNTSLIELRIDNQSQPLGNNVEMEIA---------NMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHH-HHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHH---------HHHHHCSSCCEEECCCSSHH
T ss_pred HHH-HHHHHHHhCCCceEEEecCCCCCCCHHHHHHHH---------HHHHhCCCcCEEeccCCCCC
Confidence 322 23335566667777777 66776543222111 11223346777777777764
No 407
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.97 E-value=1.2e-08 Score=104.44 Aligned_cols=237 Identities=13% Similarity=0.171 Sum_probs=155.7
Q ss_pred cccCCCC-CCcEEEccCCccccCCChhhcCCCCCCEEEccccc---CCCCCCCCCC-ccccCCCCCcEEEccCCcccccC
Q 047800 4 PEIGNLH-NLEYLGFGHNKLVGVVPATIFNLSTLKHLELYNNS---LSGSLSGTIP-RFIFNSSKLSILSLAKNSFSSFI 78 (547)
Q Consensus 4 ~~~~~l~-~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~---l~~~~~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~ 78 (547)
.+|.+.+ .|+.+.|..+ ++.+...+|.++++|+.+.++.|. ++ .++ .+|.+..+|+.+.+.++ ++.+.
T Consensus 57 ~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~-----~Ig~~aF~~c~~L~~i~~~~~-~~~I~ 129 (394)
T 4gt6_A 57 RVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVK-----KIGRQAFMFCSELTDIPILDS-VTEID 129 (394)
T ss_dssp TTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCC-----EECTTTTTTCTTCCBCGGGTT-CSEEC
T ss_pred hhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeee-----EechhhchhcccceeeccCCc-cceeh
Confidence 4577764 5999999865 888889999999999999998875 55 444 46667888998888765 67777
Q ss_pred CccccCCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCccccccc-C--------cchhhhccc
Q 047800 79 PNTFGNLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNL-S--------HSLEFFVMS 149 (547)
Q Consensus 79 ~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l-~--------~~~~~~~~~ 149 (547)
..+|.++.+|+.+.+..+ +..+... +|.++.+|+.+.+..+ ++.+...+|...- . ..+....|.
T Consensus 130 ~~aF~~c~~L~~i~lp~~-~~~I~~~-----~F~~c~~L~~i~~~~~-~~~I~~~aF~~~~l~~i~ip~~~~~i~~~af~ 202 (394)
T 4gt6_A 130 SEAFHHCEELDTVTIPEG-VTSVADG-----MFSYCYSLHTVTLPDS-VTAIEERAFTGTALTQIHIPAKVTRIGTNAFS 202 (394)
T ss_dssp TTTTTTCTTCCEEECCTT-CCEECTT-----TTTTCTTCCEEECCTT-CCEECTTTTTTCCCSEEEECTTCCEECTTTTT
T ss_pred hhhhhhhcccccccccce-eeeeccc-----ceecccccccccccce-eeEeccccccccceeEEEECCcccccccchhh
Confidence 888999999999999754 5566666 7889999999998765 6666665542210 0 122223455
Q ss_pred cCCcccEEEccCCc------------------------------------CCCCCCcCCCCCccccccccccccccCccc
Q 047800 150 YCNDILYLDLSSNF------------------------------------LTGPLPLEIGNLKGLVGVDFSMNNFSGYNK 193 (547)
Q Consensus 150 ~~~~L~~L~ls~N~------------------------------------l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~ 193 (547)
.|.++.......+. ++.+....|.++..|+.+.+..+..+
T Consensus 203 ~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~~~---- 278 (394)
T 4gt6_A 203 ECFALSTITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSVVS---- 278 (394)
T ss_dssp TCTTCCEEEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTCCE----
T ss_pred hccccceecccccccccccceeecccccccccccccccccccceEEcCCcceEcccceeeecccccEEecccccce----
Confidence 55555554433322 12223345666677777766554332
Q ss_pred cCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCCCCCeEeCCCCccccccCCC-CccCCcchhcccCc
Q 047800 194 LQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLSYLDDLDLSFNKLEGEILRG-GSFGNFLVELFEGN 263 (547)
Q Consensus 194 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~~~l~~l~l~~N 263 (547)
....+|.++++|+.+.+. +.++.....+|.++.+|+.+++..+ ++...... ..+.+|..+.+..+
T Consensus 279 ---I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s 344 (394)
T 4gt6_A 279 ---IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS 344 (394)
T ss_dssp ---ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT
T ss_pred ---ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc
Confidence 445567777788887775 4455566677888888888888755 44332332 23455666666554
No 408
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=98.90 E-value=4e-10 Score=113.28 Aligned_cols=86 Identities=9% Similarity=0.040 Sum_probs=64.6
Q ss_pred CCCccccccccCcc------ceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCC
Q 047800 317 DANISPVATSCSNE------EFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKA 390 (547)
Q Consensus 317 H~nIv~l~~~~~~~------~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp 390 (547)
|+|+++++...... ...++||||++|++|.++... .....++.|++.+|.||| ..|||||||||
T Consensus 164 ~~nL~rL~~~gv~vp~p~~~~~~~LVME~i~G~~L~~l~~~-------~~~~~l~~qll~~l~~lH---~~gIVHrDLKp 233 (397)
T 4gyi_A 164 FAFMKALYEEGFPVPEPIAQSRHTIVMSLVDALPMRQVSSV-------PDPASLYADLIALILRLA---KHGLIHGDFNE 233 (397)
T ss_dssp HHHHHHHHHTTCSCCCEEEEETTEEEEECCSCEEGGGCCCC-------SCHHHHHHHHHHHHHHHH---HTTEECSCCST
T ss_pred HHHHHHHHhcCCCCCeeeeccCceEEEEecCCccHhhhccc-------HHHHHHHHHHHHHHHHHH---HCCCcCCCCCH
Confidence 55555554332221 224699999999888765432 234567899999999999 89999999999
Q ss_pred CcEEeCCCC----------cEEEcccCCcccC
Q 047800 391 NNVLLDDNM----------VAHLSDFGIAKTG 412 (547)
Q Consensus 391 ~Nill~~~~----------~~kl~Dfg~a~~~ 412 (547)
.|||++.++ .+.|+||+-+...
T Consensus 234 ~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 234 FNILIREEKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp TSEEEEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred HHEEEeCCCCcccccccccceEEEEeCCcccC
Confidence 999998776 3899999977543
No 409
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.85 E-value=1.9e-10 Score=104.70 Aligned_cols=123 Identities=12% Similarity=0.133 Sum_probs=76.1
Q ss_pred ccCCCCCCcEEEccCC-cccc----CCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCccccc--
Q 047800 5 EIGNLHNLEYLGFGHN-KLVG----VVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSF-- 77 (547)
Q Consensus 5 ~~~~l~~L~~L~Ls~N-~i~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~-- 77 (547)
.+...++|+.|+|++| .|.. .+...+...++|++|+|++|+|++.+...+...+...++|++|+|++|.|+..
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 3455677777777777 6653 23444556677777777777776433333444555556777777777777653
Q ss_pred --CCccccCCCCCCeeec--cccccccccCchhhHhhhcCCCCCcEEeCcCCCCC
Q 047800 78 --IPNTFGNLRNLNELAL--HNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLD 128 (547)
Q Consensus 78 --~~~~~~~l~~L~~L~L--~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~ 128 (547)
+..++...++|++|+| ++|.|+..... .+...+...++|++|+|++|.|.
T Consensus 111 ~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~-~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 111 LALVEALQSNTSLIELRIDNQSQPLGNNVEM-EIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCCHHHHH-HHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHhCCCceEEEecCCCCCCCHHHHH-HHHHHHHhCCCcCEEeccCCCCC
Confidence 3445566667777777 66777654322 23334555677777777777764
No 410
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.84 E-value=1.6e-07 Score=95.44 Aligned_cols=109 Identities=11% Similarity=0.034 Sum_probs=75.0
Q ss_pred hccccCCcccEEEccCCcCCCCCCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcc
Q 047800 146 FVMSYCNDILYLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPIS 225 (547)
Q Consensus 146 ~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~ 225 (547)
..|.+|..|+.+.+..+ ++.+....|.++.+|+.+.+..+ + +.....+|.+|++|+.+.+.++.++.....+
T Consensus 234 ~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i------~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~a 305 (379)
T 4h09_A 234 GAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-V------KTVPYLLCSGCSNLTKVVMDNSAIETLEPRV 305 (379)
T ss_dssp TTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-C------SEECTTTTTTCTTCCEEEECCTTCCEECTTT
T ss_pred ccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-c------eeccccccccccccccccccccccceehhhh
Confidence 35666777888887766 55466677777888887777644 3 2244557888888888888888888777788
Q ss_pred hhCCCCCCeEeCCCCccccccCCC-CccCCcchhcccCc
Q 047800 226 LEKLSYLDDLDLSFNKLEGEILRG-GSFGNFLVELFEGN 263 (547)
Q Consensus 226 ~~~l~~L~~l~l~~N~l~~~~~~~-~~~~~l~~l~l~~N 263 (547)
|.++.+|+.+++..+ ++...... ..+.+|..+.+..+
T Consensus 306 F~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 306 FMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp TTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred hcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 888888888888765 44333332 33456666666655
No 411
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.69 E-value=2.1e-09 Score=102.75 Aligned_cols=65 Identities=26% Similarity=0.282 Sum_probs=30.7
Q ss_pred CCCCCcEEEccCCccccc--CCccccCCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCC
Q 047800 60 NSSKLSILSLAKNSFSSF--IPNTFGNLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDG 129 (547)
Q Consensus 60 ~l~~L~~L~Ls~N~l~~~--~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 129 (547)
++++|+.|+|++|+|+++ +|+.+..+++|+.|+|++|+|+++.. .+.+..+ +|++|+|++|.+.+
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~----l~~l~~l-~L~~L~L~~Npl~~ 234 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERE----LDKIKGL-KLEELWLDGNSLCD 234 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGG----GGGGTTS-CCSEEECTTSTTGG
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchh----hhhcccC-CcceEEccCCcCcc
Confidence 344555555555555542 23444455555555555555554421 0123333 55555555555543
No 412
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.56 E-value=5e-07 Score=91.67 Aligned_cols=195 Identities=14% Similarity=0.120 Sum_probs=139.6
Q ss_pred CcccCCCCCCcEEEccCCcccc------------CCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEcc
Q 047800 3 PPEIGNLHNLEYLGFGHNKLVG------------VVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLA 70 (547)
Q Consensus 3 p~~~~~l~~L~~L~Ls~N~i~~------------~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls 70 (547)
..+|.+..+++...+..+.... .....+.....+....+..+.-. .....+....+|+.+.+.
T Consensus 151 ~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----i~~~~f~~~~~l~~i~~~ 225 (379)
T 4h09_A 151 DGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVKT-----VTAYGFSYGKNLKKITIT 225 (379)
T ss_dssp SCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTCCE-----ECTTTTTTCSSCSEEECC
T ss_pred cchhcccccccccccccccceeecccceecccccceeccccccccccccccccceeE-----Eeecccccccccceeeec
Confidence 3467788888888877654321 22334555666776666554433 444566677888888886
Q ss_pred CCcccccCCccccCCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCCCCCCcccccccCcchhhhcccc
Q 047800 71 KNSFSSFIPNTFGNLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLDGILHRTYMGNLSHSLEFFVMSY 150 (547)
Q Consensus 71 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~ 150 (547)
.+ ++.+...+|.++..|+.+.+..+ ++.+... +|.++.+|+.+.+..+ ++.+...+ |.+
T Consensus 226 ~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~-----aF~~~~~l~~i~l~~~-i~~i~~~a-------------F~~ 284 (379)
T 4h09_A 226 SG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSF-----LLQNCTALKTLNFYAK-VKTVPYLL-------------CSG 284 (379)
T ss_dssp TT-CCEECTTTTTTCSSCCEEEECTT-CCEECTT-----TTTTCTTCCEEEECCC-CSEECTTT-------------TTT
T ss_pred cc-eeEEccccccCCccceEEEcCCC-ccEeCcc-----ccceeehhcccccccc-ceeccccc-------------ccc
Confidence 55 66667788889999999998776 7777766 7888999999888643 55554444 344
Q ss_pred CCcccEEEccCCcCCCCCCcCCCCCccccccccccccccCccccCCCCCcchhcCCCCCEEECcCCcCCCCCCcchhCCC
Q 047800 151 CNDILYLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDLSNNNTLNLSNNNLSGAIPISLEKLS 230 (547)
Q Consensus 151 ~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~~~~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~ 230 (547)
|.+|+.+.+.++.++.+....|.++++|+.+.|..+ + +.....+|.+|.+|+.+.+..+ ++.....+|.+..
T Consensus 285 c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l------~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c~ 356 (379)
T 4h09_A 285 CSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-L------KTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGSS 356 (379)
T ss_dssp CTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-C------CEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTSS
T ss_pred ccccccccccccccceehhhhhcCCCCCCEEEcCcc-c------cEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCCC
Confidence 568999999888888777888999999999988754 4 3345568999999999988765 6656667887765
Q ss_pred C
Q 047800 231 Y 231 (547)
Q Consensus 231 ~ 231 (547)
.
T Consensus 357 ~ 357 (379)
T 4h09_A 357 I 357 (379)
T ss_dssp C
T ss_pred C
Confidence 3
No 413
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.55 E-value=4.5e-08 Score=93.54 Aligned_cols=112 Identities=20% Similarity=0.220 Sum_probs=79.4
Q ss_pred cCCCCCCcE--EEccCCccc---cCCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCc
Q 047800 6 IGNLHNLEY--LGFGHNKLV---GVVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPN 80 (547)
Q Consensus 6 ~~~l~~L~~--L~Ls~N~i~---~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 80 (547)
|...+.|.. ++++.|+.. ...+....++++|+.|+|++|+|++. ..+|..+..+++|+.|+|++|+|+++ .
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l--~~l~~~~~~l~~L~~L~Ls~N~i~~~--~ 212 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRL--DDMSSIVQKAPNLKILNLSGNELKSE--R 212 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCC--GGGTTHHHHSTTCCEEECTTSCCCSG--G
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCC--ccchhHHhhCCCCCEEECCCCccCCc--h
Confidence 334445555 778888543 33333446789999999999999922 14567777899999999999999985 3
Q ss_pred cccCCC--CCCeeeccccccccccCch--hhHhhhcCCCCCcEEe
Q 047800 81 TFGNLR--NLNELALHNNYLTSSTLEL--SFLSLLLNCKSLTHIG 121 (547)
Q Consensus 81 ~~~~l~--~L~~L~L~~N~i~~~~~~~--~~~~~~~~l~~L~~L~ 121 (547)
.+..+. +|++|+|++|.+.+..++. -....+..+++|+.||
T Consensus 213 ~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 213 ELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 444444 9999999999998744320 1112466788999886
No 414
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=98.30 E-value=5.7e-07 Score=86.20 Aligned_cols=88 Identities=13% Similarity=0.075 Sum_probs=68.8
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccC-----------------
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGY----------------- 379 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~----------------- 379 (547)
|..+.++++++...+..++||||++|.++.+.... ......++.+++++++.||...
T Consensus 69 ~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~~------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~ 142 (263)
T 3tm0_A 69 KLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYED------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAEL 142 (263)
T ss_dssp TSCCCCEEEEEEETTEEEEEEECCSSEEHHHHCCT------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHH
T ss_pred CCCCCeEEEEEecCCceEEEEEecCCeehhhccCC------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHH
Confidence 45677888888888889999999999999876421 1223467889999999999510
Q ss_pred ---------------------------------------CCCccccCCCCCcEEeCCCCcEEEcccCCcc
Q 047800 380 ---------------------------------------SAPVIHCDIKANNVLLDDNMVAHLSDFGIAK 410 (547)
Q Consensus 380 ---------------------------------------~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~ 410 (547)
...++|+|++|.||+++.+..+.|+||+.+.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 143 DYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHhccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1458999999999999876667899998764
No 415
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=98.25 E-value=2.3e-07 Score=83.97 Aligned_cols=94 Identities=21% Similarity=0.220 Sum_probs=43.7
Q ss_pred cCCCCCCEEEcccc-cCCCCCCCCCCccccCCCCCcEEEccCCcccccC----CccccCCCCCCeeeccccccccccCch
Q 047800 31 FNLSTLKHLELYNN-SLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFI----PNTFGNLRNLNELALHNNYLTSSTLEL 105 (547)
Q Consensus 31 ~~l~~L~~L~L~~N-~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~L~~N~i~~~~~~~ 105 (547)
.+-+.|++|+|++| +|.+.+...+-.++..-+.|+.|+|++|+|...- ..++..-+.|++|+|++|+|+.....
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~- 116 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA- 116 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH-
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH-
Confidence 33445555555553 5443222223334444455555555555555321 12233345556666666655443322
Q ss_pred hhHhhhcCCCCCcEEeCcCC
Q 047800 106 SFLSLLLNCKSLTHIGLSNN 125 (547)
Q Consensus 106 ~~~~~~~~l~~L~~L~Ls~N 125 (547)
.+..++..-.+|++|+|++|
T Consensus 117 ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHhhCCceeEEECCCC
Confidence 23334444455666666544
No 416
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.20 E-value=2.4e-06 Score=81.45 Aligned_cols=82 Identities=18% Similarity=0.129 Sum_probs=61.0
Q ss_pred ccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccC--------------------
Q 047800 320 ISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGY-------------------- 379 (547)
Q Consensus 320 Iv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-------------------- 379 (547)
+.+++++...++..++||||++|.++. ... .. ...++.++++.+..||...
T Consensus 77 vP~~~~~~~~~~~~~~v~e~i~G~~l~--~~~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~ 147 (264)
T 1nd4_A 77 CAAVLDVVTEAGRDWLLLGEVPGQDLL--SSH----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTR 147 (264)
T ss_dssp BCCEEEEEECSSCEEEEEECCSSEETT--TSC----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHH
T ss_pred CCeEEEeccCCCCCEEEEEecCCcccC--cCc----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHH
Confidence 455777777777789999999998884 211 11 2356778888888888321
Q ss_pred -----------------------------------CCCccccCCCCCcEEeCCCCcEEEcccCCcc
Q 047800 380 -----------------------------------SAPVIHCDIKANNVLLDDNMVAHLSDFGIAK 410 (547)
Q Consensus 380 -----------------------------------~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~ 410 (547)
...++|+|++|.||+++.+..++++||+.+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 148 MEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HhcCCccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1129999999999999887777899999874
No 417
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.18 E-value=4.7e-06 Score=83.76 Aligned_cols=92 Identities=15% Similarity=0.217 Sum_probs=72.2
Q ss_pred CCCccccccccCcc---ceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccC--------------
Q 047800 317 DANISPVATSCSNE---EFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGY-------------- 379 (547)
Q Consensus 317 H~nIv~l~~~~~~~---~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-------------- 379 (547)
+..+.++++++.+. +..++||||++|..+.+... ..++..++..++.++++.|..||...
T Consensus 97 ~vpvP~~~~~~~~~~~~g~~~~vme~v~G~~l~~~~~---~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~ 173 (359)
T 3dxp_A 97 DVPVAKMYALCEDESVIGRAFYIMEFVSGRVLWDQSL---PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGN 173 (359)
T ss_dssp SSCCCCEEEEECCTTTTSSCEEEEECCCCBCCCCTTC---TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSC
T ss_pred CCCCCcEEEECCCCCccCCeEEEEEecCCeecCCCcc---ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCC
Confidence 44577788887766 55899999999987754221 24678888999999999999999520
Q ss_pred -----------------------------------------CCCccccCCCCCcEEeCCCC--cEEEcccCCccc
Q 047800 380 -----------------------------------------SAPVIHCDIKANNVLLDDNM--VAHLSDFGIAKT 411 (547)
Q Consensus 380 -----------------------------------------~~~i~H~dlkp~Nill~~~~--~~kl~Dfg~a~~ 411 (547)
...++|+|++|.||+++.++ .+.|+||+.+..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 174 YFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred chHHHHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 25699999999999998765 368999998864
No 418
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=98.02 E-value=1.1e-06 Score=79.42 Aligned_cols=121 Identities=14% Similarity=0.183 Sum_probs=77.6
Q ss_pred CCCCCCcEEEccCC-cccc----CCChhhcCCCCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCccccc----
Q 047800 7 GNLHNLEYLGFGHN-KLVG----VVPATIFNLSTLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSF---- 77 (547)
Q Consensus 7 ~~l~~L~~L~Ls~N-~i~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~---- 77 (547)
.+-+.|+.|+|++| +|.. .+...+..-++|+.|+|++|+|.+.++..+...+..-+.|++|+|++|.|+..
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~a 117 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 117 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHH
Confidence 45567888888875 7652 24455667778888888888887665566666666567788888888888753
Q ss_pred CCccccCCCCCCeeeccccccccccCc--hhhHhhhcCCCCCcEEeCcCCCC
Q 047800 78 IPNTFGNLRNLNELALHNNYLTSSTLE--LSFLSLLLNCKSLTHIGLSNNPL 127 (547)
Q Consensus 78 ~~~~~~~l~~L~~L~L~~N~i~~~~~~--~~~~~~~~~l~~L~~L~Ls~N~l 127 (547)
+-.++..-+.|++|+|++|....+... ..+...+..-++|+.|+++.|.+
T Consensus 118 la~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 118 LLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 223445556688888876533122211 13344555567777777776654
No 419
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=97.94 E-value=2.6e-06 Score=83.62 Aligned_cols=126 Identities=18% Similarity=0.193 Sum_probs=84.2
Q ss_pred eeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHcc---------------------------------
Q 047800 332 FKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFG--------------------------------- 378 (547)
Q Consensus 332 ~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~--------------------------------- 378 (547)
..|+||||++|.++.+.... .++..++..++.++++.++.||..
T Consensus 90 ~~~~vm~~i~G~~l~~~~~~---~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (304)
T 3sg8_A 90 MSFAGFTKIKGVPLTPLLLN---NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELK 166 (304)
T ss_dssp CSCEEEECCCCEECCHHHHH---TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSC
T ss_pred cceEEEcccCCeECCccccc---cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCC
Confidence 45899999999888764432 367778888888888888888841
Q ss_pred ----------------------CCCCccccCCCCCcEEeCC--CCcEEEcccCCcccCCCCCcccccccCCCCC---CCC
Q 047800 379 ----------------------YSAPVIHCDIKANNVLLDD--NMVAHLSDFGIAKTGEDQSMTQTQTLATIGY---MAP 431 (547)
Q Consensus 379 ----------------------~~~~i~H~dlkp~Nill~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y---~aP 431 (547)
....++|+|++|.||+++. ...+.++||+.+........ ......+ ..|
T Consensus 167 ~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~D----l~~~~~~~~~~~~ 242 (304)
T 3sg8_A 167 GPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDND----FISLMEDDEEYGM 242 (304)
T ss_dssp HHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHH----HHTTCCTTTSCCH
T ss_pred cccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHH----HHHHHhhccccCH
Confidence 0135799999999999988 56789999998865322110 0000011 122
Q ss_pred CCCCC-----C---------CCCcchhHHHHHHHHHHHHhCCCCCch
Q 047800 432 EYGRE-----G---------RVSANGDVYSFGIMLMKTFIGKKPTDE 464 (547)
Q Consensus 432 E~~~~-----~---------~~~~~sDv~s~G~il~elltg~~p~~~ 464 (547)
+.... + ......+.|++|.++|.+.+|..+|..
T Consensus 243 ~~~~~~l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~~ 289 (304)
T 3sg8_A 243 EFVSKILNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWYE 289 (304)
T ss_dssp HHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 21110 0 011225899999999999999988744
No 420
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.94 E-value=2.2e-06 Score=76.11 Aligned_cols=84 Identities=12% Similarity=0.120 Sum_probs=56.6
Q ss_pred CCCCEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCc-ccccCCccccCC----CCCCeeeccccc-cccccCchhh
Q 047800 34 STLKHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNS-FSSFIPNTFGNL----RNLNELALHNNY-LTSSTLELSF 107 (547)
Q Consensus 34 ~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l----~~L~~L~L~~N~-i~~~~~~~~~ 107 (547)
-+|++|||+++.|++.+ -..+.++++|+.|+|+++. |++.--..++.+ ++|++|+|++|. |+.....
T Consensus 61 ~~L~~LDLs~~~Itd~G----L~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~--- 133 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIG----FDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGII--- 133 (176)
T ss_dssp CCEEEEEEESCCCCGGG----GGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHH---
T ss_pred ceEeEEeCcCCCccHHH----HHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHH---
Confidence 46788888888777421 1334577888888888874 665333445543 468888888874 7654433
Q ss_pred HhhhcCCCCCcEEeCcCCC
Q 047800 108 LSLLLNCKSLTHIGLSNNP 126 (547)
Q Consensus 108 ~~~~~~l~~L~~L~Ls~N~ 126 (547)
.+..+++|++|+|+++.
T Consensus 134 --~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 134 --ALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp --HGGGCTTCCEEEEESCT
T ss_pred --HHhcCCCCCEEECCCCC
Confidence 56778888888888875
No 421
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.78 E-value=7.3e-06 Score=72.67 Aligned_cols=59 Identities=15% Similarity=0.192 Sum_probs=31.9
Q ss_pred CCCcEEEccCCcccccCCccccCCCCCCeeeccccc-cccccCchhhHhhhcCC----CCCcEEeCcCC
Q 047800 62 SKLSILSLAKNSFSSFIPNTFGNLRNLNELALHNNY-LTSSTLELSFLSLLLNC----KSLTHIGLSNN 125 (547)
Q Consensus 62 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~-i~~~~~~~~~~~~~~~l----~~L~~L~Ls~N 125 (547)
.+|+.|||+++.|+..--..+.++++|+.|+|++|. |+...-. .+..+ ++|++|+|++|
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~-----~L~~~~~~~~~L~~L~Ls~C 124 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLE-----RLSQLENLQKSMLEMEIISC 124 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHH-----HHHTCHHHHHHCCEEEEESC
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHH-----HHHhcccccCCCCEEEcCCC
Confidence 456666666666665444445566666666666663 4432221 33332 34666666655
No 422
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.34 E-value=0.00029 Score=59.38 Aligned_cols=36 Identities=33% Similarity=0.320 Sum_probs=17.6
Q ss_pred CCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCCCCC
Q 047800 88 LNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNNPLD 128 (547)
Q Consensus 88 L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~ 128 (547)
|++|+|++|+|+.++.+ .|..+++|+.|+|++|.+.
T Consensus 33 l~~L~Ls~N~l~~l~~~-----~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 33 TTELVLTGNNLTALPPG-----LLDALPALRTAHLGANPWR 68 (130)
T ss_dssp CSEEECTTSCCSSCCTT-----TGGGCTTCCEEECCSSCCB
T ss_pred CCEEECCCCcCCccChh-----hhhhccccCEEEecCCCee
Confidence 44455555555444444 4444455555555555443
No 423
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.29 E-value=0.00038 Score=58.60 Aligned_cols=59 Identities=17% Similarity=0.198 Sum_probs=43.3
Q ss_pred CEEEcccccCCCCCCCCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCeeecccccccc
Q 047800 37 KHLELYNNSLSGSLSGTIPRFIFNSSKLSILSLAKNSFSSFIPNTFGNLRNLNELALHNNYLTS 100 (547)
Q Consensus 37 ~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~ 100 (547)
..++.+++.|+- ..+|..+. ++|+.|+|++|+|+.+.++.|..+++|+.|+|++|.+.-
T Consensus 11 ~~v~Cs~~~L~~---~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~C 69 (130)
T 3rfe_A 11 TLVDCGRRGLTW---ASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRC 69 (130)
T ss_dssp TEEECCSSCCCT---TTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBC
T ss_pred CEEEeCCCCCcc---ccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeec
Confidence 367777777640 14554432 468888888888888888888889999999999997753
No 424
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=97.22 E-value=0.00063 Score=66.90 Aligned_cols=78 Identities=22% Similarity=0.205 Sum_probs=60.0
Q ss_pred ceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCC------------------------------
Q 047800 331 EFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYS------------------------------ 380 (547)
Q Consensus 331 ~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~------------------------------ 380 (547)
+..++||||++|.++.+.... .++..+...++.++++.++.||....
T Consensus 100 ~~~~lvme~i~G~~l~~~~~~---~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (320)
T 3r70_A 100 SDRFNIMKYIKGERITYEQYH---KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILE 176 (320)
T ss_dssp CSSCEEEECCCCBCCCHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEeecCCccccccccc---cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHh
Confidence 457899999999988744322 36677777888888888888884211
Q ss_pred ------------------------------CCccccCCCCCcEEeCCCCcEEEcccCCccc
Q 047800 381 ------------------------------APVIHCDIKANNVLLDDNMVAHLSDFGIAKT 411 (547)
Q Consensus 381 ------------------------------~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~ 411 (547)
..++|+|++|.||+++.+..+.++||+.+..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 177 KEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred hcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2348999999999999876789999998854
No 425
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=97.17 E-value=0.0026 Score=57.78 Aligned_cols=102 Identities=16% Similarity=0.032 Sum_probs=67.9
Q ss_pred ChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEEeCCCCcEEEcccCCcccCCCCCccccccc
Q 047800 344 SLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTL 423 (547)
Q Consensus 344 sL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 423 (547)
+|.+++...+.++++.+++.++.|.+.+|.-.-. .+.-..+=..|..|++..+|.+...+ +.+. .
T Consensus 34 SL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~--~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------~ 98 (229)
T 2yle_A 34 SLEEILRLYNQPINEEQAWAVCYQCCGSLRAAAR--RRQPRHRVRSAAQIRVWRDGAVTLAP-AADD------------A 98 (229)
T ss_dssp EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCSGGGEEEETTSCEEECC-C----------------
T ss_pred cHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhh--cccCCceecCCcceEEecCCceeccc-cccc------------c
Confidence 7999999888899999999999999999877621 11111223346788999998888764 1110 1
Q ss_pred CCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCC
Q 047800 424 ATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461 (547)
Q Consensus 424 gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p 461 (547)
....+.|||... ...+.+.=|||+|+++|.-+--..|
T Consensus 99 ~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 99 GEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp --------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred cccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 223466888764 3456888999999999999854444
No 426
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=96.96 E-value=0.001 Score=63.55 Aligned_cols=87 Identities=16% Similarity=0.099 Sum_probs=62.6
Q ss_pred ccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccC--------------------
Q 047800 320 ISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGY-------------------- 379 (547)
Q Consensus 320 Iv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-------------------- 379 (547)
|-++++++.+++..++|||+++|.++.+...... .....++.+++..++.||...
T Consensus 82 VP~v~~~~~~~~~~~lvme~l~G~~~~~~~~~~~-----~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~ 156 (272)
T 4gkh_A 82 LPTIKHFIRTPDDAWLLTTAIPGKTAFQVLEEYP-----DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSR 156 (272)
T ss_dssp CCCEEEEEEETTEEEEEEECCCSEEHHHHHHHCG-----GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHH
T ss_pred cCeEEEEEEECCeEEEEEEeeCCccccccccCCH-----HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHH
Confidence 5667788888888999999999988877654321 223345556666666666210
Q ss_pred -----------------------------------CCCccccCCCCCcEEeCCCCcEEEcccCCccc
Q 047800 380 -----------------------------------SAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT 411 (547)
Q Consensus 380 -----------------------------------~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~ 411 (547)
...++|+|+++.||+++..+.+-|+||+.+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 157 MNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHhhhhhhhccccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 12378999999999999887788999987743
No 427
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=96.84 E-value=0.0019 Score=63.09 Aligned_cols=89 Identities=15% Similarity=0.063 Sum_probs=58.0
Q ss_pred ccccccccC-ccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHcc--------------------
Q 047800 320 ISPVATSCS-NEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFG-------------------- 378 (547)
Q Consensus 320 Iv~l~~~~~-~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-------------------- 378 (547)
|.+.+.++. ..+..++||||++|.++.+..-. .++..+...++.++++.|+.||..
T Consensus 74 VP~~~~~~~~~~g~~~~v~e~i~G~~l~~~~~~---~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~ 150 (306)
T 3tdw_A 74 IPQYVYIGKRSDGNPFVGYRKVQGQILGEDGMA---VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKIL 150 (306)
T ss_dssp CCCEEEEEECTTSCEEEEEECCCSEECHHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHH
T ss_pred CCCeEeecccCCCceEEEEeccCCeECchhhhh---hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHH
Confidence 334444442 34567899999999888763221 234455555555555555555531
Q ss_pred -------------------------------------CCCCccccCCCCCcEEeCC---CCc-EEEcccCCccc
Q 047800 379 -------------------------------------YSAPVIHCDIKANNVLLDD---NMV-AHLSDFGIAKT 411 (547)
Q Consensus 379 -------------------------------------~~~~i~H~dlkp~Nill~~---~~~-~kl~Dfg~a~~ 411 (547)
....++|+|++|.||+++. ++. ..|+||+.+..
T Consensus 151 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 151 LLSEAVEDQVFPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHhcccccchhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1335699999999999987 344 58999998754
No 428
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=96.22 E-value=0.004 Score=62.02 Aligned_cols=32 Identities=19% Similarity=0.259 Sum_probs=26.6
Q ss_pred CCCccccCCCCCcEEeCCCCcEEEcccCCccc
Q 047800 380 SAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT 411 (547)
Q Consensus 380 ~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~ 411 (547)
...++|+|+++.||+++++..+.|+||+.+..
T Consensus 221 ~~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~~ 252 (357)
T 3ats_A 221 EPVLLWGDARVGNVLYRDFQPVAVLDWEMVAL 252 (357)
T ss_dssp CCEEECSSCSGGGEEEETTEEEEECCGGGCEE
T ss_pred CceEEeCCCCCCeEEEeCCcEEEEEccccccc
Confidence 45789999999999999655679999987753
No 429
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=95.72 E-value=0.0063 Score=60.81 Aligned_cols=32 Identities=31% Similarity=0.511 Sum_probs=28.0
Q ss_pred CCccccCCCCCcEEeCCCCcEEEcccCCcccC
Q 047800 381 APVIHCDIKANNVLLDDNMVAHLSDFGIAKTG 412 (547)
Q Consensus 381 ~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~ 412 (547)
..++|+|+++.||+++....+.|+||+.+...
T Consensus 213 ~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 213 RHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp CEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred cEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 56899999999999988778899999988654
No 430
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=92.42 E-value=0.13 Score=50.30 Aligned_cols=31 Identities=26% Similarity=0.319 Sum_probs=27.9
Q ss_pred CCCccccCCCCCcEEeCCCCcEEEcccCCcc
Q 047800 380 SAPVIHCDIKANNVLLDDNMVAHLSDFGIAK 410 (547)
Q Consensus 380 ~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~ 410 (547)
...++|+|+++.||+++.++.+.++||+.+.
T Consensus 221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp SCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred cCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 5789999999999999888899999998764
No 431
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=91.47 E-value=0.41 Score=45.82 Aligned_cols=29 Identities=34% Similarity=0.282 Sum_probs=24.7
Q ss_pred CCCccccCCCCCcEEeCCCCcEEEcccCCcc
Q 047800 380 SAPVIHCDIKANNVLLDDNMVAHLSDFGIAK 410 (547)
Q Consensus 380 ~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~ 410 (547)
...++|+|+.+.|++++. +.+.++|| .+.
T Consensus 187 ~~~l~HgD~~~~N~l~~~-~~~~~iD~-~~~ 215 (288)
T 3d1u_A 187 PPARIHGDLWNGNVLWQD-DGAVVIDP-AAH 215 (288)
T ss_dssp CCEEECSCCSGGGEEEET-TEEEECSC-CCE
T ss_pred CCcceECCCCcCcEEEeC-CCeEEEcC-CcC
Confidence 567999999999999988 45889999 653
No 432
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=90.80 E-value=0.45 Score=46.07 Aligned_cols=27 Identities=11% Similarity=0.246 Sum_probs=23.8
Q ss_pred CCCccccCCCCCcEEeCCCCcEEEcccC
Q 047800 380 SAPVIHCDIKANNVLLDDNMVAHLSDFG 407 (547)
Q Consensus 380 ~~~i~H~dlkp~Nill~~~~~~kl~Dfg 407 (547)
...++|+|+.+.|++++.++ +.|.|+.
T Consensus 206 ~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 206 KPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp CCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred CceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 46799999999999999887 8899974
No 433
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=89.66 E-value=0.45 Score=45.68 Aligned_cols=31 Identities=23% Similarity=0.355 Sum_probs=25.1
Q ss_pred CCCccccCCCCCcEEeCCCCcEEEcccCCccc
Q 047800 380 SAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT 411 (547)
Q Consensus 380 ~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~ 411 (547)
...++|+|+.+.||+ ..++.+.++||..+..
T Consensus 172 ~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 172 PLAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp CCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred CceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 345899999999999 5556789999987753
No 434
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=89.31 E-value=0.31 Score=49.36 Aligned_cols=77 Identities=13% Similarity=0.091 Sum_probs=46.3
Q ss_pred CCCccccCCCCCcEEeCCCCcEEEcccCCcccCCCCCccccccc--CCCCCCCCCCCCCC---CCCcchhHHHHHHHHHH
Q 047800 380 SAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTL--ATIGYMAPEYGREG---RVSANGDVYSFGIMLMK 454 (547)
Q Consensus 380 ~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~--gt~~y~aPE~~~~~---~~~~~sDv~s~G~il~e 454 (547)
...++|+|++|.||+++.++ ++++||+.+......... .... -...|.+|+..... ......++.+....+|+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dl-a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDI-GAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHH-HHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHH-HHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 78899999999999998876 999999988653321100 0000 01234455443211 11223455577777777
Q ss_pred HHhC
Q 047800 455 TFIG 458 (547)
Q Consensus 455 lltg 458 (547)
.+++
T Consensus 309 ~y~~ 312 (420)
T 2pyw_A 309 LFNK 312 (420)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 435
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=87.42 E-value=1.5 Score=39.67 Aligned_cols=122 Identities=8% Similarity=0.124 Sum_probs=79.7
Q ss_pred CCCCccccccccCccceeEEEEeccCCC-ChhHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCccccCCCCCcEE
Q 047800 316 NDANISPVATSCSNEEFKALILEYKPHG-SLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394 (547)
Q Consensus 316 ~H~nIv~l~~~~~~~~~~~lv~ey~~~g-sL~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i~H~dlkp~Nil 394 (547)
.||+.++. .+-.+++...+.++.-+.+ +... ++ ..+...+++++.+|+.-..+++ .-+|--+.|+|++
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-ik----~~~~~eKlr~l~ni~~l~~~~~-----~r~tf~L~P~NL~ 111 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-IK----SFTKNEKLRYLLNIKNLEEVNR-----TRYTFVLAPDELF 111 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-GG----GSCHHHHHHHHHHGGGGGGGGG-----SSEECCCSGGGEE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-HH----hcCHHHHHHHHHHHHHHHHHhc-----CceEEEEecceEE
Confidence 37877765 3444445555555543322 2222 33 3788999999999998886555 3467789999999
Q ss_pred eCCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCchhhhhhh
Q 047800 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEM 470 (547)
Q Consensus 395 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s~G~il~elltg~~p~~~~~~~~~ 470 (547)
++.++.+++.-.|+-..+ +|. ..+...=.-.+=+++..+++++..|........
T Consensus 112 f~~~~~p~i~~RGik~~l-----------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe~l~~G~l 165 (215)
T 4ann_A 112 FTRDGLPIAKTRGLQNVV-----------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFDALVEGNL 165 (215)
T ss_dssp ECTTSCEEESCCEETTTB-----------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHHHHHHSCG
T ss_pred EcCCCCEEEEEccCccCC-----------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHHHHHcChH
Confidence 999999999877754222 221 112222333578888999999999977655443
No 436
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=85.68 E-value=0.85 Score=44.34 Aligned_cols=33 Identities=30% Similarity=0.338 Sum_probs=28.3
Q ss_pred CCCccccCCCCCcEEeCCC----CcEEEcccCCcccC
Q 047800 380 SAPVIHCDIKANNVLLDDN----MVAHLSDFGIAKTG 412 (547)
Q Consensus 380 ~~~i~H~dlkp~Nill~~~----~~~kl~Dfg~a~~~ 412 (547)
...++|+|+.+.||+++.+ ..+.++||+.+...
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 5689999999999999874 68999999988643
No 437
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=85.64 E-value=0.75 Score=36.13 Aligned_cols=48 Identities=13% Similarity=0.226 Sum_probs=31.6
Q ss_pred CcccccCCccccCCCCCCeeeccccccccccCchhhHhhhcCCCCCcEEeCcCC
Q 047800 72 NSFSSFIPNTFGNLRNLNELALHNNYLTSSTLELSFLSLLLNCKSLTHIGLSNN 125 (547)
Q Consensus 72 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~~~~~~l~~L~~L~Ls~N 125 (547)
..++.+...+|.+|++|+.+.+-.+ ++.+... +|.+|.+|+.+.+...
T Consensus 6 ~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~-----aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 6 EPVVGMDKSLFAGNTVIREITVQPN-IGLLYDG-----MFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTT-----SSTTCTTCCCEEECCS
T ss_pred CccCEecHHHhcCCCCCcEEEcCCc-hheEcHH-----HHhccCCccEEEEcCC
Confidence 3456666667777777777777655 5555555 6777777777776554
No 438
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=83.10 E-value=1.2 Score=43.10 Aligned_cols=30 Identities=23% Similarity=0.318 Sum_probs=25.9
Q ss_pred CCCccccCCCCCcEEeCCCCcEEEcccCCccc
Q 047800 380 SAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT 411 (547)
Q Consensus 380 ~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~ 411 (547)
...++|+|+++.||+++ + .+.++||+.+..
T Consensus 194 ~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 194 TVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred CeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 46689999999999999 4 899999987754
No 439
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=82.73 E-value=0.36 Score=46.71 Aligned_cols=31 Identities=35% Similarity=0.440 Sum_probs=26.6
Q ss_pred CCCccccCCCCCcEEeCCCCcEEEcccCCcc
Q 047800 380 SAPVIHCDIKANNVLLDDNMVAHLSDFGIAK 410 (547)
Q Consensus 380 ~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~ 410 (547)
..+++|+|+++.||+++.+..+.++||+.+.
T Consensus 186 ~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 186 PAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp CEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred CcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 4579999999999999987667899998774
No 440
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=80.71 E-value=0.64 Score=46.78 Aligned_cols=30 Identities=27% Similarity=0.360 Sum_probs=24.8
Q ss_pred CccccCCCCCcEEe------CCCCcEEEcccCCccc
Q 047800 382 PVIHCDIKANNVLL------DDNMVAHLSDFGIAKT 411 (547)
Q Consensus 382 ~i~H~dlkp~Nill------~~~~~~kl~Dfg~a~~ 411 (547)
.++|+|+.+.||++ +.+..+.++||..|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 35699999999999 4567899999987753
No 441
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=77.45 E-value=4.3 Score=36.68 Aligned_cols=117 Identities=10% Similarity=0.139 Sum_probs=75.3
Q ss_pred CCCccccccccCccceeEEEEeccCCCChhHHhhhCCCCCCHHHHHHHHHHHHHHHH-HHHccCCCCccccCCCCCcEEe
Q 047800 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALE-YMHFGYSAPVIHCDIKANNVLL 395 (547)
Q Consensus 317 H~nIv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~l~-~lH~~~~~~i~H~dlkp~Nill 395 (547)
||.+ -..+-.+++...+.++.-+++.=...++ .++..++++++.+++.-.. +++ .-+|--+.|+|+++
T Consensus 49 ~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~----~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~NL~f 117 (219)
T 4ano_A 49 DPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR----KTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPENLMF 117 (219)
T ss_dssp CSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH----TSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGGEEE
T ss_pred CCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH----hcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCceEEE
Confidence 6766 2222244455566666543433233443 3788999999999888765 444 45677889999999
Q ss_pred CCCCcEEEcccCCcccCCCCCcccccccCCCCCCCCCCCCCCCCCcchhH-HHHHHHHHHHHhCCCCCchhhh
Q 047800 396 DDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDV-YSFGIMLMKTFIGKKPTDEIFN 467 (547)
Q Consensus 396 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv-~s~G~il~elltg~~p~~~~~~ 467 (547)
+.++.+++.-.|+-.. ++|.-+ + ..|. -.+=|++..++.++..|.....
T Consensus 118 ~~~~~p~i~hRGi~~~-----------------lpP~e~-----~-ee~fl~qyKali~all~~K~~Fe~l~~ 167 (219)
T 4ano_A 118 NRALEPFFLHVGVKES-----------------LPPDEW-----D-DERLLREVKATVLALTEGEYRFDEYLK 167 (219)
T ss_dssp CTTCCEEESCCEETTT-----------------BSSCSC-----C-HHHHHHHHHHHHHHHTTCSSCHHHHHH
T ss_pred eCCCcEEEEEcCCccc-----------------CCCCCC-----C-HHHHHHHHHHHHHHHHcCCCCHHHHHh
Confidence 9999999997775422 223211 1 2233 3477888888999988876444
No 442
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=74.07 E-value=1.3 Score=44.17 Aligned_cols=31 Identities=16% Similarity=0.291 Sum_probs=26.5
Q ss_pred CCCccccCCCCCcEEeCCCCcEEEcccCCccc
Q 047800 380 SAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT 411 (547)
Q Consensus 380 ~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~ 411 (547)
...++|+|++|.||+++.+ .++++||..+..
T Consensus 226 ~~~L~HGDl~~~Nil~~~~-~~~lID~e~a~~ 256 (397)
T 2olc_A 226 AETLIHGDLHTGSIFASEH-ETKVIDPEFAFY 256 (397)
T ss_dssp CCEEECSCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred CCceeeCCCCcCcEEEeCC-CeEEEeCccccc
Confidence 5789999999999999876 489999987753
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=72.15 E-value=1.3 Score=43.42 Aligned_cols=32 Identities=25% Similarity=0.309 Sum_probs=28.0
Q ss_pred CCCccccCCCCCcEEeCCCCcEEEcccCCccc
Q 047800 380 SAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT 411 (547)
Q Consensus 380 ~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~ 411 (547)
...++|+|+.+.||+++.++.+.++||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 35799999999999999888899999987754
No 444
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=72.05 E-value=3.1 Score=42.52 Aligned_cols=17 Identities=24% Similarity=0.591 Sum_probs=15.1
Q ss_pred CCCccccCCCCCcEEeC
Q 047800 380 SAPVIHCDIKANNVLLD 396 (547)
Q Consensus 380 ~~~i~H~dlkp~Nill~ 396 (547)
...++|+|+.+.||+++
T Consensus 289 ~~v~cHnDl~~gNIL~~ 305 (458)
T 2qg7_A 289 PIVLCHCDLLSSNIINT 305 (458)
T ss_dssp CEEEECSCCCGGGEEEC
T ss_pred CeeEEecCCCCCcEEee
Confidence 34689999999999998
No 445
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=71.14 E-value=1.8 Score=42.68 Aligned_cols=30 Identities=23% Similarity=0.396 Sum_probs=24.8
Q ss_pred CCCccccCCCCCcEEeCCCCcEEEcccCCcc
Q 047800 380 SAPVIHCDIKANNVLLDDNMVAHLSDFGIAK 410 (547)
Q Consensus 380 ~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~ 410 (547)
...++|+|+++.||+++.+. +.++||..+.
T Consensus 211 ~~~l~HgDl~~~Nil~~~~~-~~lID~e~a~ 240 (369)
T 3c5i_A 211 TIVFCHNDLQENNIINTNKC-LRLIDFEYSG 240 (369)
T ss_dssp CEEEECSCCCGGGEEECC-C-EEECCCTTCE
T ss_pred CeEEEeCCCCcccEEecCCc-EEEEEecCCC
Confidence 45689999999999998654 8999998774
No 446
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=65.68 E-value=2.1 Score=43.38 Aligned_cols=19 Identities=26% Similarity=0.485 Sum_probs=15.7
Q ss_pred CCCccccCCCCCcEEeCCC
Q 047800 380 SAPVIHCDIKANNVLLDDN 398 (547)
Q Consensus 380 ~~~i~H~dlkp~Nill~~~ 398 (547)
...++|+|+.+.||+++.+
T Consensus 248 ~~v~~H~Dl~~gNiL~~~~ 266 (429)
T 1nw1_A 248 PVTFCHNDLQEGNILLPKA 266 (429)
T ss_dssp CEEEECSCCCGGGEEEEC-
T ss_pred CeEEEeCCCCCCeEEeeCC
Confidence 3468999999999999875
No 447
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=62.72 E-value=3.2 Score=41.20 Aligned_cols=31 Identities=29% Similarity=0.353 Sum_probs=26.6
Q ss_pred CCCccccCCCCCcEEeCCC----CcEEEcccCCcc
Q 047800 380 SAPVIHCDIKANNVLLDDN----MVAHLSDFGIAK 410 (547)
Q Consensus 380 ~~~i~H~dlkp~Nill~~~----~~~kl~Dfg~a~ 410 (547)
...++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 219 ~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 219 PVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp CEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred CcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 3468999999999999876 789999998774
No 448
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=62.38 E-value=20 Score=27.76 Aligned_cols=37 Identities=14% Similarity=0.251 Sum_probs=18.0
Q ss_pred ccCCCCCcEEEccCCcccccCCccccCCCCCCeeeccc
Q 047800 58 IFNSSKLSILSLAKNSFSSFIPNTFGNLRNLNELALHN 95 (547)
Q Consensus 58 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 95 (547)
|.++++|+.+.|-.+ ++.+-..+|.+|.+|+.+.+.+
T Consensus 16 F~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 16 FAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp TTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred hcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 334444444444432 3444455555555555555544
No 449
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=60.05 E-value=3.8 Score=41.01 Aligned_cols=31 Identities=26% Similarity=0.322 Sum_probs=26.5
Q ss_pred CCCccccCCCCCcEEeCCC------CcEEEcccCCcc
Q 047800 380 SAPVIHCDIKANNVLLDDN------MVAHLSDFGIAK 410 (547)
Q Consensus 380 ~~~i~H~dlkp~Nill~~~------~~~kl~Dfg~a~ 410 (547)
...++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 243 ~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 243 PVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp CEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred CeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 4568899999999999876 789999998764
No 450
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=48.07 E-value=7.2 Score=39.29 Aligned_cols=31 Identities=23% Similarity=0.340 Sum_probs=26.4
Q ss_pred CCCccccCCCCCcEEeCCCCcEEEcccCCccc
Q 047800 380 SAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT 411 (547)
Q Consensus 380 ~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~ 411 (547)
...++|+|+.+.||+ +.++.+.++||..+..
T Consensus 261 ~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 261 SLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp CEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred CceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 346889999999999 7788999999987753
No 451
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=45.83 E-value=6.3 Score=37.11 Aligned_cols=25 Identities=36% Similarity=0.415 Sum_probs=20.5
Q ss_pred CCCccccCCCCCcEEeCCCCcEEEcc
Q 047800 380 SAPVIHCDIKANNVLLDDNMVAHLSD 405 (547)
Q Consensus 380 ~~~i~H~dlkp~Nill~~~~~~kl~D 405 (547)
...++|+|+++.|++++.++ +.+.|
T Consensus 187 ~p~LvHGDlw~gNvl~~~~g-~~~iD 211 (288)
T 3f7w_A 187 PPARIHGDLWNGNVLWQDDG-AVVID 211 (288)
T ss_dssp CCEEECSCCSGGGEEEETTE-EEECS
T ss_pred CCeeeecCCCCCcEEEcCCC-eEEEe
Confidence 45799999999999999886 44555
No 452
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=23.00 E-value=92 Score=16.78 Aligned_cols=16 Identities=25% Similarity=0.302 Sum_probs=9.7
Q ss_pred hHHHHHHHHHHHHHHH
Q 047800 528 PKEIVTRLLKIIESLL 543 (547)
Q Consensus 528 ~~eil~~L~~i~~~~~ 543 (547)
++|+.++|+.+.+++.
T Consensus 3 adelykeledlqerlr 18 (27)
T 3twe_A 3 ADELYKELEDLQERLR 18 (27)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4566666666666553
Done!