BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>047801
IFALFLRPKKDHKYRFHWNLYHHGVGYAILVLGIINVFKGLDILNPENKWKSAYIIVISV
LGGIAVLLEAITWIVVISRKSRSRKA

High Scoring Gene Products

Symbol, full name Information P value
AT3G25290 protein from Arabidopsis thaliana 1.3e-31
AT4G12980 protein from Arabidopsis thaliana 3.4e-29
AT5G47530 protein from Arabidopsis thaliana 4.0e-26
AT4G17280 protein from Arabidopsis thaliana 1.1e-25
AT5G35735 protein from Arabidopsis thaliana 7.6e-25
AT3G59070 protein from Arabidopsis thaliana 4.8e-16
AT2G04850 protein from Arabidopsis thaliana 5.1e-14
AT3G07570 protein from Arabidopsis thaliana 9.9e-10
AT3G61750 protein from Arabidopsis thaliana 2.2e-07
AT2G30890 protein from Arabidopsis thaliana 0.00087

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  047801
        (86 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2090240 - symbol:AT3G25290 "AT3G25290" species...   347  1.3e-31   1
TAIR|locus:2123271 - symbol:AT4G12980 "AT4G12980" species...   324  3.4e-29   1
TAIR|locus:2168948 - symbol:AT5G47530 species:3702 "Arabi...   295  4.0e-26   1
TAIR|locus:2130789 - symbol:AT4G17280 species:3702 "Arabi...   291  1.1e-25   1
TAIR|locus:505006660 - symbol:AT5G35735 "AT5G35735" speci...   283  7.6e-25   1
TAIR|locus:2077690 - symbol:AT3G59070 species:3702 "Arabi...   207  4.8e-16   1
TAIR|locus:2049254 - symbol:AT2G04850 species:3702 "Arabi...   187  5.1e-14   1
TAIR|locus:2091097 - symbol:AT3G07570 species:3702 "Arabi...   147  9.9e-10   1
TAIR|locus:2076770 - symbol:AT3G61750 species:3702 "Arabi...   126  2.2e-07   1
TAIR|locus:2052846 - symbol:AT2G30890 "AT2G30890" species...    90  0.00087   1


>TAIR|locus:2090240 [details] [associations]
            symbol:AT3G25290 "AT3G25290" species:3702 "Arabidopsis
            thaliana" [GO:0007275 "multicellular organismal development"
            evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0016021
            "integral to membrane" evidence=IEA] [GO:0016020 "membrane"
            evidence=ISS] [GO:0005886 "plasma membrane" evidence=IDA]
            [GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR004877
            Pfam:PF03188 GO:GO:0016021 GO:GO:0005886 GO:GO:0009506
            EMBL:CP002686 GenomeReviews:BA000014_GR InterPro:IPR006593
            SMART:SM00665 PROSITE:PS50939 EMBL:AB026647 InterPro:IPR005018
            SMART:SM00664 PROSITE:PS50836 eggNOG:NOG235840 HOGENOM:HOG000239819
            InterPro:IPR017214 Pfam:PF04526 PIRSF:PIRSF037471 EMBL:AY057704
            EMBL:BT002214 IPI:IPI00524418 RefSeq:NP_001030764.1
            RefSeq:NP_566763.1 UniGene:At.20203 ProteinModelPortal:Q9LSE7
            PaxDb:Q9LSE7 PRIDE:Q9LSE7 EnsemblPlants:AT3G25290.1
            EnsemblPlants:AT3G25290.2 GeneID:822123 KEGG:ath:AT3G25290
            TAIR:At3g25290 InParanoid:Q9LSE7 OMA:FTLATIQ PhylomeDB:Q9LSE7
            ProtClustDB:CLSN2685792 Genevestigator:Q9LSE7 Uniprot:Q9LSE7
        Length = 393

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 62/83 (74%), Positives = 76/83 (91%)

Query:     1 IFALFLRPKKDHKYRFHWNLYHHGVGYAILVLGIINVFKGLDILNPENKWKSAYIIVISV 60
             +FA+ LRPKKDHKYRF+WN+YHHGVGYAIL LGIINVFKGL+IL P++ +K+AYI VI+V
Sbjct:   304 MFAMLLRPKKDHKYRFYWNIYHHGVGYAILTLGIINVFKGLNILKPQDTYKTAYIAVIAV 363

Query:    61 LGGIAVLLEAITWIVVISRKSRS 83
             LGGIA+LLEAITW+VV+ RKS +
Sbjct:   364 LGGIALLLEAITWVVVLKRKSNN 386


>TAIR|locus:2123271 [details] [associations]
            symbol:AT4G12980 "AT4G12980" species:3702 "Arabidopsis
            thaliana" [GO:0007275 "multicellular organismal development"
            evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0016021
            "integral to membrane" evidence=IEA] [GO:0016020 "membrane"
            evidence=ISS] InterPro:IPR004877 Pfam:PF03188 GO:GO:0016021
            EMBL:CP002687 InterPro:IPR006593 SMART:SM00665 PROSITE:PS50939
            EMBL:AL161535 EMBL:AL079349 InterPro:IPR005018 SMART:SM00664
            PROSITE:PS50836 InterPro:IPR017214 Pfam:PF04526 PIRSF:PIRSF037471
            ProtClustDB:CLSN2685792 EMBL:BT003827 EMBL:BT005128 IPI:IPI00528765
            PIR:T10200 RefSeq:NP_193034.1 UniGene:At.3514 STRING:Q9SV71
            PRIDE:Q9SV71 EnsemblPlants:AT4G12980.1 GeneID:826910
            KEGG:ath:AT4G12980 TAIR:At4g12980 InParanoid:Q9SV71 OMA:NTHRNIG
            PhylomeDB:Q9SV71 Genevestigator:Q9SV71 Uniprot:Q9SV71
        Length = 394

 Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
 Identities = 57/86 (66%), Positives = 74/86 (86%)

Query:     1 IFALFLRPKKDHKYRFHWNLYHHGVGYAILVLGIINVFKGLDILNPENKWKSAYIIVISV 60
             +FA+ LRP+KDHK+RF WN+YHHGVGY+IL+LGIINVFKGL ILNP++ +K+AYI VI  
Sbjct:   305 MFAMLLRPRKDHKFRFVWNIYHHGVGYSILILGIINVFKGLSILNPKHTYKTAYIAVIGT 364

Query:    61 LGGIAVLLEAITWIVVISRKS-RSRK 85
             LGGI +LLE +TW++V+ RKS +S K
Sbjct:   365 LGGITLLLEVVTWVIVLKRKSAKSTK 390


>TAIR|locus:2168948 [details] [associations]
            symbol:AT5G47530 species:3702 "Arabidopsis thaliana"
            [GO:0005886 "plasma membrane" evidence=ISM] [GO:0007275
            "multicellular organismal development" evidence=ISS] [GO:0016021
            "integral to membrane" evidence=IEA] [GO:0016020 "membrane"
            evidence=ISS] [GO:0010413 "glucuronoxylan metabolic process"
            evidence=RCA] [GO:0045492 "xylan biosynthetic process"
            evidence=RCA] InterPro:IPR004877 Pfam:PF03188 GO:GO:0016021
            EMBL:CP002688 GenomeReviews:BA000015_GR InterPro:IPR006593
            SMART:SM00665 PROSITE:PS50939 EMBL:AB025628 InterPro:IPR005018
            SMART:SM00664 PROSITE:PS50836 eggNOG:NOG281275 UniGene:At.66684
            UniGene:At.7964 HOGENOM:HOG000239819 ProtClustDB:CLSN2686387
            InterPro:IPR017214 Pfam:PF04526 PIRSF:PIRSF037471 EMBL:BT012551
            EMBL:AK176454 IPI:IPI00532608 RefSeq:NP_199564.1 PaxDb:Q9FGK4
            PRIDE:Q9FGK4 EnsemblPlants:AT5G47530.1 GeneID:834803
            KEGG:ath:AT5G47530 TAIR:At5g47530 InParanoid:Q9FGK4 OMA:PLANGGI
            PhylomeDB:Q9FGK4 ArrayExpress:Q9FGK4 Genevestigator:Q9FGK4
            Uniprot:Q9FGK4
        Length = 395

 Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
 Identities = 48/79 (60%), Positives = 66/79 (83%)

Query:     1 IFALFLRPKKDHKYRFHWNLYHHGVGYAILVLGIINVFKGLDILNPENKWKSAYIIVISV 60
             +FA+FLRPK +HKYR +WN+YHH VGY++++L ++NVFKGLDIL+PE +W++AY  +I V
Sbjct:   295 VFAMFLRPKPEHKYRVYWNIYHHTVGYSVIILAVVNVFKGLDILSPEKQWRNAYTAIIVV 354

Query:    61 LGGIAVLLEAITWIVVISR 79
             LG +AV+LE  TW VVI R
Sbjct:   355 LGIVAVVLEGFTWYVVIKR 373


>TAIR|locus:2130789 [details] [associations]
            symbol:AT4G17280 species:3702 "Arabidopsis thaliana"
            [GO:0005576 "extracellular region" evidence=ISM] [GO:0007275
            "multicellular organismal development" evidence=ISS] [GO:0016021
            "integral to membrane" evidence=IEA] [GO:0016020 "membrane"
            evidence=ISS] InterPro:IPR004877 Pfam:PF03188 GO:GO:0016021
            EMBL:CP002687 GenomeReviews:CT486007_GR InterPro:IPR006593
            SMART:SM00665 PROSITE:PS50939 InterPro:IPR005018 SMART:SM00664
            PROSITE:PS50836 UniGene:At.48869 UniGene:At.63700 EMBL:AY072011
            EMBL:BT002717 IPI:IPI00526777 RefSeq:NP_193461.5
            ProteinModelPortal:Q8VYH6 PRIDE:Q8VYH6 EnsemblPlants:AT4G17280.1
            GeneID:827442 KEGG:ath:AT4G17280 TAIR:At4g17280
            HOGENOM:HOG000239819 OMA:GRCAGES PhylomeDB:Q8VYH6
            ProtClustDB:CLSN2686387 Genevestigator:Q8VYH6 InterPro:IPR017214
            Pfam:PF04526 PIRSF:PIRSF037471 Uniprot:Q8VYH6
        Length = 402

 Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
 Identities = 49/85 (57%), Positives = 67/85 (78%)

Query:     1 IFALFLRPKKDHKYRFHWNLYHHGVGYAILVLGIINVFKGLDILNPENKWKSAYIIVISV 60
             +FA+FLRPK +HK+R +WN+YHH +GY I++LG++NVFKGL IL+P+ +WK+AYI +I V
Sbjct:   303 VFAMFLRPKPEHKHRLYWNIYHHTIGYTIIILGVVNVFKGLGILSPKKQWKNAYIGIIVV 362

Query:    61 LGGIAVLLEAITWIVVISRKSRSRK 85
             L  +A LLEA TW VVI R+    K
Sbjct:   363 LAIVATLLEAFTWYVVIKRRKLEAK 387


>TAIR|locus:505006660 [details] [associations]
            symbol:AT5G35735 "AT5G35735" species:3702 "Arabidopsis
            thaliana" [GO:0016020 "membrane" evidence=ISS] [GO:0005886 "plasma
            membrane" evidence=IDA] [GO:0006612 "protein targeting to membrane"
            evidence=RCA] [GO:0009625 "response to insect" evidence=RCA]
            [GO:0009862 "systemic acquired resistance, salicylic acid mediated
            signaling pathway" evidence=RCA] [GO:0009963 "positive regulation
            of flavonoid biosynthetic process" evidence=RCA] [GO:0010363
            "regulation of plant-type hypersensitive response" evidence=RCA]
            [GO:0031348 "negative regulation of defense response" evidence=RCA]
            InterPro:IPR004877 Pfam:PF03188 GO:GO:0016021 GO:GO:0005886
            EMBL:CP002688 InterPro:IPR006593 SMART:SM00665 PROSITE:PS50939
            EMBL:AB011485 InterPro:IPR005018 SMART:SM00664 PROSITE:PS50836
            InterPro:IPR017214 Pfam:PF04526 PIRSF:PIRSF037471 EMBL:AF372955
            EMBL:BT002220 IPI:IPI00522562 RefSeq:NP_568531.1 UniGene:At.7499
            ProteinModelPortal:Q9FKH6 STRING:Q9FKH6 PRIDE:Q9FKH6
            EnsemblPlants:AT5G35735.1 GeneID:833550 KEGG:ath:AT5G35735
            TAIR:At5g35735 InParanoid:Q9FKH6 OMA:YIGILIF PhylomeDB:Q9FKH6
            ProtClustDB:CLSN2917720 Genevestigator:Q9FKH6 Uniprot:Q9FKH6
        Length = 404

 Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
 Identities = 46/82 (56%), Positives = 64/82 (78%)

Query:     1 IFALFLRPKKDHKYRFHWNLYHHGVGYAILVLGIINVFKGLDILNPENKWKSAYIIVISV 60
             +FAL +RPK DHKYR +WN+YHH VGY  ++L I+N+FKG DIL+PE+KW+ AYI ++  
Sbjct:   293 VFALLVRPKPDHKYRTYWNVYHHTVGYTTIILSIVNIFKGFDILDPEDKWRWAYIGILIF 352

Query:    61 LGGIAVLLEAITWIVVISRKSR 82
             LG   ++LE +TW +V+ RKSR
Sbjct:   353 LGACVLILEPLTWFIVLRRKSR 374


>TAIR|locus:2077690 [details] [associations]
            symbol:AT3G59070 species:3702 "Arabidopsis thaliana"
            [GO:0005886 "plasma membrane" evidence=ISM] [GO:0007275
            "multicellular organismal development" evidence=ISS] [GO:0016021
            "integral to membrane" evidence=IEA] [GO:0016020 "membrane"
            evidence=ISS] InterPro:IPR004877 Pfam:PF03188 GO:GO:0016021
            EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL163527
            InterPro:IPR006593 SMART:SM00665 PROSITE:PS50939 InterPro:IPR005018
            SMART:SM00664 PROSITE:PS50836 HOGENOM:HOG000239819
            InterPro:IPR017214 Pfam:PF04526 IPI:IPI00548030 PIR:T47789
            RefSeq:NP_191466.1 UniGene:At.66523 ProteinModelPortal:Q9LYS9
            EnsemblPlants:AT3G59070.1 GeneID:825076 KEGG:ath:AT3G59070
            TAIR:At3g59070 eggNOG:NOG249827 InParanoid:Q9LYS9 OMA:TIICCIA
            PhylomeDB:Q9LYS9 ProtClustDB:CLSN2915540 Genevestigator:Q9LYS9
            Uniprot:Q9LYS9
        Length = 466

 Score = 207 (77.9 bits), Expect = 4.8e-16, P = 4.8e-16
 Identities = 39/90 (43%), Positives = 56/90 (62%)

Query:     1 IFALFLRPKKDHKYRFHWNLYHHGVGYAILVLGIINVFKGLDILNPENKWKSAYIIVISV 60
             I +L  RP KDHKYR +WN YHH +GY ++VL I N++KGL IL P + WK AY  +I  
Sbjct:   304 ILSLKARPNKDHKYRKYWNWYHHTMGYIVIVLSIYNIYKGLSILQPGSIWKIAYTTIICC 363

Query:    61 LGGIAVLLEAIT----WIVVISRKSRSRKA 86
             +   AV++E +     W  +  +KS+  +A
Sbjct:   364 IAAFAVVMEILQFKKRWARLFFKKSKDVEA 393


>TAIR|locus:2049254 [details] [associations]
            symbol:AT2G04850 species:3702 "Arabidopsis thaliana"
            [GO:0005576 "extracellular region" evidence=ISM] [GO:0016021
            "integral to membrane" evidence=IEA] [GO:0016020 "membrane"
            evidence=ISS] InterPro:IPR004877 Pfam:PF03188 GO:GO:0016021
            EMBL:CP002685 InterPro:IPR006593 SMART:SM00665 PROSITE:PS50939
            EMBL:AC006955 InterPro:IPR005018 SMART:SM00664 PROSITE:PS50836
            InterPro:IPR017214 Pfam:PF04526 PIRSF:PIRSF037471 EMBL:BT025973
            IPI:IPI00543883 PIR:C84462 RefSeq:NP_565316.1 UniGene:At.41253
            UniGene:At.68913 ProteinModelPortal:Q9SJ74
            EnsemblPlants:AT2G04850.1 GeneID:815031 KEGG:ath:AT2G04850
            TAIR:At2g04850 InParanoid:Q9SJ74 OMA:GYSPTIH PhylomeDB:Q9SJ74
            ProtClustDB:CLSN2687971 ArrayExpress:Q9SJ74 Genevestigator:Q9SJ74
            Uniprot:Q9SJ74
        Length = 404

 Score = 187 (70.9 bits), Expect = 5.1e-14, P = 5.1e-14
 Identities = 35/84 (41%), Positives = 53/84 (63%)

Query:     3 ALFLRPKKDHKYRFHWNLYHHGVGYAILVLGIINVFKGLDILNPENKW-KSAYIIVISVL 61
             AL  RPK  +K+R +W  YHH VGYA +V+G++NVF+G ++L     + K  Y + +S L
Sbjct:   305 ALLFRPKTTNKFRRYWKSYHHFVGYACVVMGVVNVFQGFEVLREGRSYAKLGYCLCLSTL 364

Query:    62 GGIAVLLEAITWIVVISRKSRSRK 85
              G+ V +E  +W VV  RK++  K
Sbjct:   365 VGVCVAMEVNSW-VVFCRKAKEEK 387


>TAIR|locus:2091097 [details] [associations]
            symbol:AT3G07570 species:3702 "Arabidopsis thaliana"
            [GO:0016021 "integral to membrane" evidence=IEA] [GO:0016020
            "membrane" evidence=ISS] [GO:0016132 "brassinosteroid biosynthetic
            process" evidence=RCA] InterPro:IPR004877 Pfam:PF03188 Pfam:PF03351
            GO:GO:0016021 EMBL:CP002686 InterPro:IPR006593 SMART:SM00665
            PROSITE:PS50939 InterPro:IPR005018 SMART:SM00664 PROSITE:PS50836
            eggNOG:NOG281275 EMBL:AK228175 IPI:IPI00547399 RefSeq:NP_566313.2
            UniGene:At.27235 ProteinModelPortal:Q0WRW8 PaxDb:Q0WRW8
            PRIDE:Q0WRW8 EnsemblPlants:AT3G07570.1 GeneID:819948
            KEGG:ath:AT3G07570 OMA:YHHNIGR ProtClustDB:CLSN2690771
            Genevestigator:Q0WRW8 Uniprot:Q0WRW8
        Length = 369

 Score = 147 (56.8 bits), Expect = 9.9e-10, P = 9.9e-10
 Identities = 26/69 (37%), Positives = 38/69 (55%)

Query:     1 IFALFLRPKKDHKYRFHWNLYHHGVGYAILVLGIINVFKGLDILNPENKWKSAYIIVISV 60
             + AL  RP K  KYR +WN YHH +G  +++L I N+F G+ +      W   Y   ++V
Sbjct:   294 MLALLARPDKQSKYRKYWNWYHHNIGRLLIILAISNIFYGIHLAKAGTSWNGGYGFAVAV 353

Query:    61 LGGIAVLLE 69
             L   A+ LE
Sbjct:   354 LALTAIGLE 362


>TAIR|locus:2076770 [details] [associations]
            symbol:AT3G61750 species:3702 "Arabidopsis thaliana"
            [GO:0005576 "extracellular region" evidence=ISM] [GO:0016021
            "integral to membrane" evidence=IEA] [GO:0016020 "membrane"
            evidence=ISS] InterPro:IPR004877 Pfam:PF03188 Pfam:PF03351
            GO:GO:0016021 EMBL:CP002686 GenomeReviews:BA000014_GR
            InterPro:IPR006593 SMART:SM00665 PROSITE:PS50939 EMBL:AL132959
            InterPro:IPR005018 SMART:SM00664 PROSITE:PS50836 eggNOG:NOG281275
            IPI:IPI00534466 PIR:T47967 RefSeq:NP_191734.1 UniGene:At.50302
            ProteinModelPortal:Q9M363 PRIDE:Q9M363 EnsemblPlants:AT3G61750.1
            GeneID:825348 KEGG:ath:AT3G61750 TAIR:At3g61750
            HOGENOM:HOG000238174 InParanoid:Q9M363 OMA:MIYLAFQ PhylomeDB:Q9M363
            ProtClustDB:CLSN2720235 Genevestigator:Q9M363 Uniprot:Q9M363
        Length = 398

 Score = 126 (49.4 bits), Expect = 2.2e-07, P = 2.2e-07
 Identities = 27/70 (38%), Positives = 39/70 (55%)

Query:     1 IFALFLRPKKDHKYRFHWNLYHHGVGYAILVLGIINVFKGLDIL-NPENKWKSAYIIVIS 59
             + A F RP+K+ K R +WN YHH +G   L  G +N+  G+ +  N  + WK  Y  V+S
Sbjct:   300 VLAFFARPQKETKMRRYWNWYHHWIGRISLFFGAVNIVLGIRMADNGGDGWKIGYGFVLS 359

Query:    60 VLGGIAVLLE 69
             V     V+LE
Sbjct:   360 VTLLAFVVLE 369


>TAIR|locus:2052846 [details] [associations]
            symbol:AT2G30890 "AT2G30890" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0016021 "integral to
            membrane" evidence=IEA] [GO:0016020 "membrane" evidence=ISS]
            InterPro:IPR004877 Pfam:PF03188 GO:GO:0016021 EMBL:CP002685
            GenomeReviews:CT485783_GR EMBL:AC004669 InterPro:IPR006593
            SMART:SM00665 PROSITE:PS50939 EMBL:BT010412 EMBL:AK176781
            IPI:IPI00539787 PIR:H84713 RefSeq:NP_180646.1 UniGene:At.48532
            EnsemblPlants:AT2G30890.1 GeneID:817639 KEGG:ath:AT2G30890
            TAIR:At2g30890 eggNOG:NOG308789 HOGENOM:HOG000238150
            InParanoid:O80854 OMA:PANDHKE PhylomeDB:O80854
            ProtClustDB:CLSN2912938 ArrayExpress:O80854 Genevestigator:O80854
            Uniprot:O80854
        Length = 257

 Score = 90 (36.7 bits), Expect = 0.00087, P = 0.00087
 Identities = 29/84 (34%), Positives = 44/84 (52%)

Query:     5 FLRPKKDHKYRFHWNLYHHGVGYAILVLGIINVFKGLDILNPENKWKSAY---IIVISVL 61
             FLRP ++ K R  W + H  +G +I +LGIIN++ GL     +   KSA    I+  + L
Sbjct:   144 FLRPPREEKARRKWFVGHWILGTSIAILGIINIYTGLHAYAKKTS-KSANLWTILFTAQL 202

Query:    62 GGIA-VLLEAITWIVVISRKSRSR 84
               IA V L    W  + S+ + +R
Sbjct:   203 SCIALVYLFQDKWSYIQSQATFNR 226


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.329   0.145   0.458    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       86        86   0.00091  102 3  11 22  0.38    29
                                                     29  0.47    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  547 (58 KB)
  Total size of DFA:  117 KB (2077 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.91u 0.13s 9.04t   Elapsed:  00:00:01
  Total cpu time:  8.91u 0.13s 9.04t   Elapsed:  00:00:01
  Start:  Thu May  9 19:12:19 2013   End:  Thu May  9 19:12:20 2013

Back to top