BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047802
(185 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 3/119 (2%)
Query: 48 IQVGTKRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDV 107
+ +G + E+ V GY+ P GT + N++ + D W +P F PERFL +
Sbjct: 349 VPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFL---DSSGY 405
Query: 108 RGQNFELLPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVE 166
+ L+PFS GRR C G A M +L F + P D+ RLG+T++
Sbjct: 406 FAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMTLQ 464
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 3/119 (2%)
Query: 48 IQVGTKRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDV 107
+ +G + E+ V GY+ P GT + N++ + D W +P F PERFL +
Sbjct: 349 VPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFL---DSSGY 405
Query: 108 RGQNFELLPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVE 166
+ L+PFS GRR C G A M +L F + P D+ RLG+T++
Sbjct: 406 FAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMTLQ 464
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 9/134 (6%)
Query: 48 IQVGTKRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDV 107
+ +G + + V G+ P GT L N+ + +D VWE+P +F PE FL D
Sbjct: 348 VPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFL------DA 401
Query: 108 RGQNFE---LLPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLT 164
+G + LPFS+GRR C G A + SL F + P+ +P +
Sbjct: 402 QGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQPRPSHHGVFAF 461
Query: 165 VEKSTPLEVLVSPR 178
+ +P E+ PR
Sbjct: 462 LVSPSPYELCAVPR 475
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 3/141 (2%)
Query: 38 ILNKARNELDIQVGTKRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPER 97
++N+ I + +R ++ ++G P G + I + L RDP W EP KF PER
Sbjct: 339 VVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPER 398
Query: 98 FLTRHKDTDVRGQNFELLPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDM 157
F ++KD + PF SG R C G+ FAL M+ L + F + +
Sbjct: 399 FSKKNKDNI---DPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPL 455
Query: 158 GERLGLTVEKSTPLEVLVSPR 178
LG ++ P+ + V R
Sbjct: 456 KLSLGGLLQPEKPVVLKVESR 476
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 3/141 (2%)
Query: 38 ILNKARNELDIQVGTKRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPER 97
++N+ I + +R ++ ++G P G + I + L RDP W EP KF PER
Sbjct: 338 VVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPER 397
Query: 98 FLTRHKDTDVRGQNFELLPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDM 157
F ++KD + PF SG R C G+ FAL M+ L + F + +
Sbjct: 398 FSKKNKDNI---DPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPL 454
Query: 158 GERLGLTVEKSTPLEVLVSPR 178
LG ++ P+ + V R
Sbjct: 455 KLSLGGLLQPEKPVVLKVESR 475
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 3/141 (2%)
Query: 38 ILNKARNELDIQVGTKRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPER 97
++N+ I + +R ++ ++G P G + I + L RDP W EP KF PER
Sbjct: 337 VVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPER 396
Query: 98 FLTRHKDTDVRGQNFELLPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDM 157
F ++KD + PF SG R C G+ FAL M+ L + F + +
Sbjct: 397 FSKKNKDNI---DPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPL 453
Query: 158 GERLGLTVEKSTPLEVLVSPR 178
LG ++ P+ + V R
Sbjct: 454 KLSLGGLLQPEKPVVLKVESR 474
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 59/113 (52%)
Query: 56 SMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFELL 115
+ + T++G+ P +F+N W++ DP +WE+P +F+PERFLT + + +++
Sbjct: 366 TTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTADGTAINKPLSEKMM 425
Query: 116 PFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVEKS 168
F G+R C G A + LA L + + P +D+ GLT++ +
Sbjct: 426 LFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVDLTPIYGLTMKHA 478
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 9/134 (6%)
Query: 48 IQVGTKRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDV 107
+ +G + + V G+ P GT L N+ + +D VWE+P +F PE FL D
Sbjct: 348 VPLGMTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFL------DA 401
Query: 108 RGQNFE---LLPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLT 164
+G + LPFS+GRR C G A + SL F + P+ +P +
Sbjct: 402 QGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQPRPSHHGVFAF 461
Query: 165 VEKSTPLEVLVSPR 178
+ +P E+ PR
Sbjct: 462 LVSPSPYELCAVPR 475
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 63.5 bits (153), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 59/127 (46%), Gaps = 10/127 (7%)
Query: 61 TVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTR----HKDTDVRGQNFELLP 116
+V GY+ P T +F+N W + DP W P F P RFL + +KD R ++
Sbjct: 368 SVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLDKDGLINKDLTSR-----VMI 422
Query: 117 FSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVEKSTPLEVLVS 176
FS G+R C G + + ++ L H D NEP M GLT+ K +V V+
Sbjct: 423 FSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEPAKMNFSYGLTI-KPKSFKVNVT 481
Query: 177 PRLSASL 183
R S L
Sbjct: 482 LRESMEL 488
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 69/126 (54%), Gaps = 12/126 (9%)
Query: 54 RQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFE 113
R+++ E + GY P+G + + + +QRDP +++ +F P+R+L + +V +
Sbjct: 343 RRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLP-ERAANV--PKYA 399
Query: 114 LLPFSSGRRMCPGVSFALQVMQFTLASLP--HGFDIATPSNEPLDMGERLGLTVEKSTPL 171
+ PFS+G+R CP F++ + A+L + F+ SN+ + R+G+T+ P
Sbjct: 400 MKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGSNDAV----RVGITLR---PH 452
Query: 172 EVLVSP 177
++LV P
Sbjct: 453 DLLVRP 458
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 1/131 (0%)
Query: 38 ILNKARNELDIQVGTKRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPER 97
IL R+ + + + ++ G+ P G +F+N W++ D +W P +F PER
Sbjct: 345 ILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPER 404
Query: 98 FLTRHKDTDVRGQNFELLPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDM 157
FLT D + + +++ F G+R C G + A + LA L + + P +DM
Sbjct: 405 FLTPDGAID-KVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSVPLGVKVDM 463
Query: 158 GERLGLTVEKS 168
GLT++ +
Sbjct: 464 TPIYGLTMKHA 474
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 62/125 (49%), Gaps = 7/125 (5%)
Query: 55 QSMEECTVSG-YNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFE 113
+++++ TV G Y P GT L +N L +E+ KF+PER+L + K + F
Sbjct: 364 RTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKEKKIN----PFA 419
Query: 114 LLPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVEKSTPLEV 173
LPF G+RMC G A + L + +DI NEP++M LG+ V S L +
Sbjct: 420 HLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATDNEPVEMLH-LGILV-PSRELPI 477
Query: 174 LVSPR 178
PR
Sbjct: 478 AFRPR 482
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 59 ECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFELLPFS 118
+ ++ + GT++ IN+W L + W +P +F PERFL T + + LPF
Sbjct: 360 DSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNP-AGTQLISPSVSYLPFG 418
Query: 119 SGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPL 155
+G R C G A Q + +A L FD+ P + L
Sbjct: 419 AGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQL 455
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 62/136 (45%), Gaps = 16/136 (11%)
Query: 58 EECTVSGYNFP--SGTQLFINVWKLQRDPHVWEEPCK-FQPERFLTRHKDTDVRGQNFEL 114
+E TV G +P G +L + + +L RD +W + + F+PERF + + F+
Sbjct: 337 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---ENPSAIPQHAFK- 392
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVE-------- 166
PF +G+R CPG FAL L + FD +N LD+ E L L E
Sbjct: 393 -PFGNGQRACPGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKS 451
Query: 167 KSTPLEVLVSPRLSAS 182
K PL + SP S
Sbjct: 452 KKIPLGGIPSPSTEQS 467
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 50/117 (42%), Gaps = 13/117 (11%)
Query: 51 GTKRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQ 110
G R+ +++C G++FP G + + + DP ++ +P KF PERF T
Sbjct: 320 GGFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSAT--HNP 377
Query: 111 NFELLPFSSGRRMCPGVSFALQVMQFTLASLPHGFD-----------IATPSNEPLD 156
F +PF G R C G FA M+ L FD + TPS P D
Sbjct: 378 PFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQNLELVVTPSPRPKD 434
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 16/136 (11%)
Query: 58 EECTVSGYNFP--SGTQLFINVWKLQRDPHVWEEPCK-FQPERFLTRHKDTDVRGQNFEL 114
+E TV G +P G +L + + +L RD +W + + F+PERF + + F+
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---ENPSAIPQHAFK- 391
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVE-------- 166
PF +G+R C G FAL L + FD +N LD+ E L L E
Sbjct: 392 -PFGNGQRACEGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKS 450
Query: 167 KSTPLEVLVSPRLSAS 182
K PL + SP S
Sbjct: 451 KKIPLGGIPSPSTEQS 466
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 60/131 (45%), Gaps = 16/131 (12%)
Query: 58 EECTVSGYNFP--SGTQLFINVWKLQRDPHVWEEPCK-FQPERFLTRHKDTDVRGQNFEL 114
+E TV G +P G +L + + +L RD VW + + F+PERF + + F+
Sbjct: 337 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERF---ENPSAIPQHAFK- 392
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVE-------- 166
PF +G+R C G FAL L + FD +N LD+ E L L E
Sbjct: 393 -PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKS 451
Query: 167 KSTPLEVLVSP 177
K PL + SP
Sbjct: 452 KKIPLGGIPSP 462
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 16/136 (11%)
Query: 58 EECTVSGYNFP--SGTQLFINVWKLQRDPHVWEEPCK-FQPERFLTRHKDTDVRGQNFEL 114
+E TV G +P G +L + + +L RD +W + + F+PERF + + F+
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---ENPSAIPQHAFK- 391
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVE-------- 166
PF +G+R C G FAL L + FD +N LD+ E L L E
Sbjct: 392 -PFGNGQRACIGKQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKS 450
Query: 167 KSTPLEVLVSPRLSAS 182
K PL + SP S
Sbjct: 451 KKIPLGGIPSPSTEQS 466
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 16/136 (11%)
Query: 58 EECTVSGYNFP--SGTQLFINVWKLQRDPHVWEEPCK-FQPERFLTRHKDTDVRGQNFEL 114
+E TV G +P G +L + + +L RD +W + + F+PERF + + F+
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---ENPSAIPQHAFK- 391
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVE-------- 166
PF +G+R C G FAL L + FD +N LD+ E L L E
Sbjct: 392 -PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKS 450
Query: 167 KSTPLEVLVSPRLSAS 182
K PL + SP S
Sbjct: 451 KKIPLGGIPSPSTEQS 466
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 16/136 (11%)
Query: 58 EECTVSGYNFP--SGTQLFINVWKLQRDPHVWEEPCK-FQPERFLTRHKDTDVRGQNFEL 114
+E TV G +P G +L + + +L RD +W + + F+PERF + + F+
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---ENPSAIPQHAFK- 391
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVE-------- 166
PF +G+R C G FAL L + FD +N LD+ E L L E
Sbjct: 392 -PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKS 450
Query: 167 KSTPLEVLVSPRLSAS 182
K PL + SP S
Sbjct: 451 KKIPLGGIPSPSTEQS 466
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 16/136 (11%)
Query: 58 EECTVSGYNFP--SGTQLFINVWKLQRDPHVWEEPCK-FQPERFLTRHKDTDVRGQNFEL 114
+E TV G +P G +L + + +L RD +W + + F+PERF + + F+
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---ENPSAIPQHAFK- 391
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVE-------- 166
PF +G+R C G FAL L + FD +N LD+ E L L E
Sbjct: 392 -PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKS 450
Query: 167 KSTPLEVLVSPRLSAS 182
K PL + SP S
Sbjct: 451 KKIPLGGIPSPSTEQS 466
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 16/136 (11%)
Query: 58 EECTVSGYNFP--SGTQLFINVWKLQRDPHVWEEPCK-FQPERFLTRHKDTDVRGQNFEL 114
+E TV G +P G +L + + +L RD +W + + F+PERF + + F+
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---ENPSAIPQHAFK- 391
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVE-------- 166
PF +G+R C G FAL L + FD +N LD+ E L L E
Sbjct: 392 -PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKS 450
Query: 167 KSTPLEVLVSPRLSAS 182
K PL + SP S
Sbjct: 451 KKIPLGGIPSPSTEQS 466
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 16/136 (11%)
Query: 58 EECTVSGYNFP--SGTQLFINVWKLQRDPHVWEEPCK-FQPERFLTRHKDTDVRGQNFEL 114
+E TV G +P G +L + + +L RD +W + + F+PERF + + F+
Sbjct: 339 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---ENPSAIPQHAFK- 394
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVE-------- 166
PF +G+R C G FAL L + FD +N LD+ E L L E
Sbjct: 395 -PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKS 453
Query: 167 KSTPLEVLVSPRLSAS 182
K PL + SP S
Sbjct: 454 KKIPLGGIPSPSTEQS 469
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 16/136 (11%)
Query: 58 EECTVSGYNFP--SGTQLFINVWKLQRDPHVWEEPCK-FQPERFLTRHKDTDVRGQNFEL 114
+E TV G +P G +L + + +L RD +W + + F+PERF + + F+
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---ENPSAIPQHAFK- 391
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVE-------- 166
PF +G+R C G FAL L + FD +N LD+ E L L E
Sbjct: 392 -PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKS 450
Query: 167 KSTPLEVLVSPRLSAS 182
K PL + SP S
Sbjct: 451 KKIPLGGIPSPSTEQS 466
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 16/136 (11%)
Query: 58 EECTVSGYNFP--SGTQLFINVWKLQRDPHVWEEPCK-FQPERFLTRHKDTDVRGQNFEL 114
+E TV G +P G +L + + +L RD +W + + F+PERF + + F+
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---ENPSAIPQHAFK- 391
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVE-------- 166
PF +G+R C G FAL L + FD +N LD+ E L L E
Sbjct: 392 -PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKS 450
Query: 167 KSTPLEVLVSPRLSAS 182
K PL + SP S
Sbjct: 451 KKIPLGGIPSPSTEQS 466
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 16/136 (11%)
Query: 58 EECTVSGYNFP--SGTQLFINVWKLQRDPHVWEEPCK-FQPERFLTRHKDTDVRGQNFEL 114
+E TV G +P G +L + + +L RD +W + + F+PERF + + F+
Sbjct: 339 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---ENPSAIPQHAFK- 394
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVE-------- 166
PF +G+R C G FAL L + FD +N LD+ E L L E
Sbjct: 395 -PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKS 453
Query: 167 KSTPLEVLVSPRLSAS 182
K PL + SP S
Sbjct: 454 KKIPLGGIPSPSTEQS 469
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 16/136 (11%)
Query: 58 EECTVSGYNFP--SGTQLFINVWKLQRDPHVWEEPCK-FQPERFLTRHKDTDVRGQNFEL 114
+E TV G +P G +L + + +L RD +W + + F+PERF + + F+
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---ENPSAIPQHAFK- 391
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVE-------- 166
PF +G+R C G FAL L + FD +N LD+ E L L E
Sbjct: 392 -PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKS 450
Query: 167 KSTPLEVLVSPRLSAS 182
K PL + SP S
Sbjct: 451 KKIPLGGIPSPSTEQS 466
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 16/136 (11%)
Query: 58 EECTVSGYNFP--SGTQLFINVWKLQRDPHVWEEPCK-FQPERFLTRHKDTDVRGQNFEL 114
+E TV G +P G +L + + +L RD +W + + F+PERF + + F+
Sbjct: 339 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---ENPSAIPQHAFK- 394
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVE-------- 166
PF +G+R C G FAL L + FD +N LD+ E L L E
Sbjct: 395 -PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKS 453
Query: 167 KSTPLEVLVSPRLSAS 182
K PL + SP S
Sbjct: 454 KKIPLGGIPSPSTEQS 469
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 16/136 (11%)
Query: 58 EECTVSGYNFP--SGTQLFINVWKLQRDPHVWEEPCK-FQPERFLTRHKDTDVRGQNFEL 114
+E TV G +P G +L + + +L RD +W + + F+PERF + + F+
Sbjct: 337 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---ENPSAIPQHAFK- 392
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVE-------- 166
PF +G+R C G FAL L + FD +N LD+ E L L E
Sbjct: 393 -PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKS 451
Query: 167 KSTPLEVLVSPRLSAS 182
K PL + SP S
Sbjct: 452 KKIPLGGIPSPSTEQS 467
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 16/136 (11%)
Query: 58 EECTVSGYNFP--SGTQLFINVWKLQRDPHVWEEPCK-FQPERFLTRHKDTDVRGQNFEL 114
+E TV G +P G +L + + +L RD +W + + F+PERF + + F+
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---ENPSAIPQHAFK- 391
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVE-------- 166
PF +G+R C G FAL L + FD +N LD+ E L L E
Sbjct: 392 -PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKS 450
Query: 167 KSTPLEVLVSPRLSAS 182
K PL + SP S
Sbjct: 451 KKIPLGGIPSPSTEQS 466
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 16/136 (11%)
Query: 58 EECTVSGYNFP--SGTQLFINVWKLQRDPHVWEEPCK-FQPERFLTRHKDTDVRGQNFEL 114
+E TV G +P G +L + + +L RD +W + + F+PERF + + F+
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---ENPSAIPQHAFK- 391
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVE-------- 166
PF +G+R C G FAL L + FD +N LD+ E L L E
Sbjct: 392 -PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKS 450
Query: 167 KSTPLEVLVSPRLSAS 182
K PL + SP S
Sbjct: 451 KKIPLGGIPSPSTEQS 466
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 16/136 (11%)
Query: 58 EECTVSGYNFP--SGTQLFINVWKLQRDPHVWEEPCK-FQPERFLTRHKDTDVRGQNFEL 114
+E TV G +P G +L + + +L RD +W + + F+PERF + + F+
Sbjct: 337 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---ENPSAIPQHAFK- 392
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVE-------- 166
PF +G+R C G FAL L + FD +N LD+ E L L E
Sbjct: 393 -PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKS 451
Query: 167 KSTPLEVLVSPRLSAS 182
K PL + SP S
Sbjct: 452 KKIPLGGIPSPSTEQS 467
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 16/136 (11%)
Query: 58 EECTVSGYNFP--SGTQLFINVWKLQRDPHVWEEPCK-FQPERFLTRHKDTDVRGQNFEL 114
+E TV G +P G +L + + +L RD +W + + F+PERF + + F+
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---ENPSAIPQHAFK- 391
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVE-------- 166
PF +G+R C G FAL L + FD +N LD+ E L L E
Sbjct: 392 -PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKS 450
Query: 167 KSTPLEVLVSPRLSAS 182
K PL + SP S
Sbjct: 451 KKIPLGGIPSPSTEQS 466
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 16/136 (11%)
Query: 58 EECTVSGYNFP--SGTQLFINVWKLQRDPHVWEEPCK-FQPERFLTRHKDTDVRGQNFEL 114
+E TV G +P G +L + + +L RD +W + + F+PERF + + F+
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---ENPSAIPQHAFK- 391
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVE-------- 166
PF +G+R C G FAL L + FD +N LD+ E L L E
Sbjct: 392 -PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKS 450
Query: 167 KSTPLEVLVSPRLSAS 182
K PL + SP S
Sbjct: 451 KKIPLGGIPSPSTEQS 466
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 16/131 (12%)
Query: 58 EECTVSGYNFP--SGTQLFINVWKLQRDPHVWEEPCK-FQPERFLTRHKDTDVRGQNFEL 114
+E TV G +P G +L + + +L RD +W + + F+PERF + + F+
Sbjct: 337 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---ENPSAIPQHAFK- 392
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVE-------- 166
PF +G+R C G FAL L + FD +N LD+ E L L E
Sbjct: 393 -PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKS 451
Query: 167 KSTPLEVLVSP 177
K PL + SP
Sbjct: 452 KKIPLGGIPSP 462
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 10/90 (11%)
Query: 67 FPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFELLPFSSGR----R 122
F GT + ++++ DP +W+ P +F+PERF R ++ F+++P G
Sbjct: 308 FKKGTSVLLDLYGTNHDPRLWDHPDEFRPERFAEREENL------FDMIPQGGGHAEKGH 361
Query: 123 MCPGVSFALQVMQFTLASLPHGFDIATPSN 152
CPG ++VM+ +L L H + P
Sbjct: 362 RCPGEGITIEVMKASLDFLVHQIEYDVPEQ 391
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 16/131 (12%)
Query: 58 EECTVSGYNFP--SGTQLFINVWKLQRDPHVWEEPCK-FQPERFLTRHKDTDVRGQNFEL 114
+E TV G +P G +L + + +L RD +W + + F+PERF + + F+
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---ENPSAIPQHAFK- 391
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVE-------- 166
PF +G+R C G FAL L + FD +N LD+ E L L E
Sbjct: 392 -PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKS 450
Query: 167 KSTPLEVLVSP 177
K PL + SP
Sbjct: 451 KKIPLGGIPSP 461
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 58 EECTVSGYNFP--SGTQLFINVWKLQRDPHVWEEPCK-FQPERFLTRHKDTDVRGQNFEL 114
+E TV G +P G +L + + +L RD +W + + F+PERF + + F+
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---ENPSAIPQHAFK- 391
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVE 166
PF +G+R C G FAL L + FD +N LD+ E L L E
Sbjct: 392 -PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 61 TVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFELLPFSSG 120
TV+GY P G Q+ ++ QR W E F P+R+L +D G+ F +PF +G
Sbjct: 341 TVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYL---QDNPASGEKFAYVPFGAG 397
Query: 121 RRMCPGVSFA 130
R C G +FA
Sbjct: 398 RHRCIGENFA 407
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 58 EECTVSGYNFP--SGTQLFINVWKLQRDPHVWEEPCK-FQPERFLTRHKDTDVRGQNFEL 114
+E TV G +P G +L + + +L RD +W + + F+PERF + + F+
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---ENPSAIPQHAFK- 391
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVE 166
PF +G+R C G FAL L + FD +N LD+ E L L E
Sbjct: 392 -PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 58 EECTVSGYNFP--SGTQLFINVWKLQRDPHVWEEPCK-FQPERFLTRHKDTDVRGQNFEL 114
+E TV G +P G +L + + +L RD +W + + F+PERF + + F+
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---ENPSAIPQHAFK- 391
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVE 166
PF +G+R C G FAL L + FD +N LD+ E L L E
Sbjct: 392 -PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 58 EECTVSGYNFP--SGTQLFINVWKLQRDPHVWEEPCK-FQPERFLTRHKDTDVRGQNFEL 114
+E TV G +P G +L + + +L RD +W + + F+PERF + + F+
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---ENPSAIPQHAFK- 391
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVE 166
PF +G+R C G FAL L + FD +N LD+ E L L E
Sbjct: 392 -PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 58 EECTVSGYNFP--SGTQLFINVWKLQRDPHVWEEPCK-FQPERFLTRHKDTDVRGQNFEL 114
+E TV G +P G +L + + +L RD +W + + F+PERF + + F+
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---ENPSAIPQHAFK- 391
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVE 166
PF +G+R C G FAL L + FD +N LD+ E L L E
Sbjct: 392 -PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 58 EECTVSGYNFP--SGTQLFINVWKLQRDPHVWEEPCK-FQPERFLTRHKDTDVRGQNFEL 114
+E TV G +P G +L + + +L RD +W + + F+PERF + + F+
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---ENPSAIPQHAFK- 391
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVE 166
PF +G+R C G FAL L + FD +N LD+ E L L E
Sbjct: 392 -PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 58 EECTVSGYNFP--SGTQLFINVWKLQRDPHVWEEPCK-FQPERFLTRHKDTDVRGQNFEL 114
+E TV G +P G +L + + +L RD +W + + F+PERF + + F+
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---ENPSAIPQHAFK- 391
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVE 166
PF +G+R C G FAL L + FD +N LD+ E L L E
Sbjct: 392 -PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 16/131 (12%)
Query: 58 EECTVSGYNFP--SGTQLFINVWKLQRDPHVWEEPCK-FQPERFLTRHKDTDVRGQNFEL 114
+E TV G +P G +L + + +L RD +W + + F+PERF + + F+
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---ENPSAIPQHAFK- 391
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVE-------- 166
PF +G+R C G FAL L + FD +N LD+ E L L E
Sbjct: 392 -PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLVLKPEGFVVKAKS 450
Query: 167 KSTPLEVLVSP 177
K PL + SP
Sbjct: 451 KKIPLGGIPSP 461
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 16/131 (12%)
Query: 58 EECTVSGYNFP--SGTQLFINVWKLQRDPHVWEEPCK-FQPERFLTRHKDTDVRGQNFEL 114
+E TV G +P G +L + + +L RD +W + + F+PERF + + F+
Sbjct: 337 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---ENPSAIPQHAFK- 392
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVE-------- 166
PF +G+R C G FAL L + FD +N LD+ E L L E
Sbjct: 393 -PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLVLKPEGFVVKAKS 451
Query: 167 KSTPLEVLVSP 177
K PL + SP
Sbjct: 452 KKIPLGGIPSP 462
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 61/136 (44%), Gaps = 16/136 (11%)
Query: 58 EECTVSGYNFP--SGTQLFINVWKLQRDPHVWEEPCK-FQPERFLTRHKDTDVRGQNFEL 114
+E TV G +P G ++ + + +L RD +W + + F+PERF + + F+
Sbjct: 342 KEDTVLGGEYPLEKGDEIMVLIPQLHRDKTIWGDDVEEFRPERF---ENPSAIPQHAFK- 397
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVE-------- 166
PF +G+R C G FAL L + FD +N LD+ E L L E
Sbjct: 398 -PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKS 456
Query: 167 KSTPLEVLVSPRLSAS 182
K PL + SP S
Sbjct: 457 KKIPLGGIPSPSTEQS 472
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 16/131 (12%)
Query: 58 EECTVSGYNFP--SGTQLFINVWKLQRDPHVWEEPCK-FQPERFLTRHKDTDVRGQNFEL 114
+E TV G +P G +L + + +L RD +W + + F+PERF + + F+
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---ENPSAIPQHAFK- 391
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVE-------- 166
PF +G+R C G FAL L + FD +N LD+ E L L E
Sbjct: 392 -PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLLLKPEGFVVKAKS 450
Query: 167 KSTPLEVLVSP 177
K PL + SP
Sbjct: 451 KKIPLGGIPSP 461
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 16/131 (12%)
Query: 58 EECTVSGYNFP--SGTQLFINVWKLQRDPHVWEEPCK-FQPERFLTRHKDTDVRGQNFEL 114
+E TV G +P G +L + + +L RD +W + + F+PERF + + F+
Sbjct: 337 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---ENPSAIPQHAFK- 392
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVE-------- 166
PF +G+R C G FAL L + FD +N LD+ E L L E
Sbjct: 393 -PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLLLKPEGFVVKAKS 451
Query: 167 KSTPLEVLVSP 177
K PL + SP
Sbjct: 452 KKIPLGGIPSP 462
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 56/124 (45%), Gaps = 17/124 (13%)
Query: 61 TVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFELLPFSSG 120
++ GY+ P G + N+ D VWE+P +F+P+RFL G N L F G
Sbjct: 371 SIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRFLE-------PGANPSALAFGCG 423
Query: 121 RRMCPGVSFALQVMQFTLASLPHGFDI------ATPSNEPLDMGERLGLTVEKSTPLEVL 174
R+C G S A + LA L F + A PS +P G+ + K P +V
Sbjct: 424 ARVCLGESLARLELFVVLARLLQAFTLLPPPVGALPSLQP---DPYCGVNL-KVQPFQVR 479
Query: 175 VSPR 178
+ PR
Sbjct: 480 LQPR 483
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 58 EECTVSGYNFP--SGTQLFINVWKLQRDPHVWEEPCK-FQPERFLTRHKDTDVRGQNFEL 114
+E TV G +P G +L + + +L RD +W + + F+PERF + + F+
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---ENPSAIPQHAFK- 391
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVE 166
P+ +G+R C G FAL L + FD +N LD+ E L L E
Sbjct: 392 -PYGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 58 EECTVSGYNFP--SGTQLFINVWKLQRDPHVWEEPCK-FQPERFLTRHKDTDVRGQNFEL 114
+E TV G +P G ++ + + +L RD +W + + F+PERF + + F+
Sbjct: 336 KEDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPERF---ENPSAIPQHAFK- 391
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVE 166
PF +G+R C G FAL L + FD +N LD+ E L L E
Sbjct: 392 -PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 8/109 (7%)
Query: 58 EECTVSGYNFP--SGTQLFINVWKLQRDPHVWEEPCK-FQPERFLTRHKDTDVRGQNFEL 114
+E T+ G +P G +L + + +L RD VW + + F+PERF + + F+
Sbjct: 337 KEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERF---ENPSAIPQHAFK- 392
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGL 163
PF +G+R C G FAL L + FD +N LD+ E L L
Sbjct: 393 -PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIEETLTL 440
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 10/104 (9%)
Query: 58 EECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRG---QNFEL 114
+ + GY P T++F+ + DPH +E+P F P+ FL D G +
Sbjct: 354 QHTSFRGYIIPKDTEVFLILSTALHDPHYFEKPDAFNPDHFL------DANGALKKTEAF 407
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATP-SNEPLDM 157
+PFS G+R+C G A + ++ F +A+P + E +D+
Sbjct: 408 IPFSLGKRICLGEGIARAELFLFFTTILQNFSMASPVAPEDIDL 451
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 58 EECTVSGYNFP--SGTQLFINVWKLQRDPHVWEEPCK-FQPERFLTRHKDTDVRGQNFEL 114
+E TV G +P G +L + + +L RD +W + + F+PERF + + F+
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---ENPSAIPQHAFK- 391
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVE 166
P+ +G+R C G FAL L + FD +N LD+ E L L E
Sbjct: 392 -PWGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 8/105 (7%)
Query: 58 EECTVSGYNFP--SGTQLFINVWKLQRDPHVWEEPCK-FQPERFLTRHKDTDVRGQNFEL 114
+E TV G +P G +L + + +L RD +W + + F+PERF + + F+
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---ENPSAIPQHAFK- 391
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGE 159
PF +G+R C G FAL L + FD +N LD+ E
Sbjct: 392 -PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKE 435
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 8/112 (7%)
Query: 58 EECTVSGYNFP--SGTQLFINVWKLQRDPHVWEEPCK-FQPERFLTRHKDTDVRGQNFEL 114
+E TV G +P G +L + + +L RD +W + + F+PERF + + F+
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---ENPSAIPQHAFK- 391
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVE 166
P +G+R C G FAL L + FD +N LD+ E L L E
Sbjct: 392 -PHGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 8/112 (7%)
Query: 58 EECTVSGYNFP--SGTQLFINVWKLQRDPHVWEEPCK-FQPERFLTRHKDTDVRGQNFEL 114
+E TV G +P G +L + + +L RD +W + + F+PERF + + F+
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---ENPSAIPQHAFK- 391
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVE 166
P +G+R C G FAL L + FD +N LD+ E L L E
Sbjct: 392 -PAGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 9/106 (8%)
Query: 48 IQVGTKRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDV 107
I G ++ GY P T++F + DP +E P F P FL D
Sbjct: 344 IPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFL------DA 397
Query: 108 RG---QNFELLPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATP 150
G +N +PFS G+R+C G A + ++ F IA+P
Sbjct: 398 NGALKRNEGFMPFSLGKRICAGEGIARTELFLFFTTILQNFSIASP 443
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 9/106 (8%)
Query: 48 IQVGTKRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDV 107
I G ++ GY P T++F + DP +E P F P FL D
Sbjct: 344 IPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFL------DA 397
Query: 108 RG---QNFELLPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATP 150
G +N +PFS G+R+C G A + ++ F IA+P
Sbjct: 398 NGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP 443
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 9/106 (8%)
Query: 48 IQVGTKRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDV 107
I G ++ GY P T++F + DP +E P F P FL D
Sbjct: 344 IPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFL------DA 397
Query: 108 RG---QNFELLPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATP 150
G +N +PFS G+R+C G A + ++ F IA+P
Sbjct: 398 NGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP 443
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 9/106 (8%)
Query: 48 IQVGTKRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDV 107
I G ++ GY P T++F + DP +E P F P FL D
Sbjct: 344 IPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFL------DA 397
Query: 108 RG---QNFELLPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATP 150
G +N +PFS G+R+C G A + ++ F IA+P
Sbjct: 398 NGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP 443
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 9/106 (8%)
Query: 48 IQVGTKRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDV 107
I G ++ GY P T++F + DP +E P F P FL D
Sbjct: 344 IPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFL------DA 397
Query: 108 RG---QNFELLPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATP 150
G +N +PFS G+R+C G A + ++ F IA+P
Sbjct: 398 NGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP 443
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 4/120 (3%)
Query: 48 IQVGTKRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDV 107
I V +R + + Y P+ T + + ++ + RDP + P KF P R+L++ KD
Sbjct: 351 ISVTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPAFFSSPDKFDPTRWLSKDKDL-- 408
Query: 108 RGQNFELLPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVEK 167
+F L F G R C G A M L + F + +D L LT +K
Sbjct: 409 --IHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILENFKVEMQHIGDVDTIFNLILTPDK 466
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 45/113 (39%), Gaps = 11/113 (9%)
Query: 51 GTKRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQ 110
GT R EE + G P T L + + + R +E+P F P+RF
Sbjct: 321 GTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRF-----GPGAPKP 375
Query: 111 NFELLPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGL 163
F PFS G R C G FA ++ +A L + L G+R GL
Sbjct: 376 RFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFR------LVPGQRFGL 422
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 10/94 (10%)
Query: 64 GYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFELLPFSSGRRM 123
G FP G Q+ ++++ D W +P +F+PERF +D+ F +P G
Sbjct: 303 GMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAWDEDS------FNFIPQGGGDHY 356
Query: 124 ----CPGVSFALQVMQFTLASLPHGFDIATPSNE 153
CPG L +M+ L + P +
Sbjct: 357 LGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQD 390
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 10/94 (10%)
Query: 64 GYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFELLPFSSGRRM 123
G FP G Q+ ++++ D W +P +F+PERF +D+ F +P G
Sbjct: 295 GMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAWDEDS------FNFIPQGGGDHY 348
Query: 124 ----CPGVSFALQVMQFTLASLPHGFDIATPSNE 153
CPG L +M+ L + P +
Sbjct: 349 LGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQD 382
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 10/94 (10%)
Query: 64 GYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFELLPFSSGRRM 123
G FP G Q+ ++++ D W +P +F+PERF +D+ F +P G
Sbjct: 303 GMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAWDEDS------FNFIPQGGGDHY 356
Query: 124 ----CPGVSFALQVMQFTLASLPHGFDIATPSNE 153
CPG L +M+ L + P +
Sbjct: 357 LGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQD 390
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 10/94 (10%)
Query: 64 GYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFELLPFSSGRRM 123
G FP G Q+ ++++ D W +P +F+PERF +D+ F +P G
Sbjct: 295 GMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAWDEDS------FNFIPQGGGDHY 348
Query: 124 ----CPGVSFALQVMQFTLASLPHGFDIATPSNE 153
CPG L +M+ L + P +
Sbjct: 349 LGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQD 382
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 10/94 (10%)
Query: 64 GYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFELLPFSSGRRM 123
G FP G Q+ ++++ D W +P +F+PERF +D+ F +P G
Sbjct: 295 GMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAWDEDS------FNFIPQGGGDHY 348
Query: 124 ----CPGVSFALQVMQFTLASLPHGFDIATPSNE 153
CPG L +M+ L + P +
Sbjct: 349 LGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQD 382
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 10/94 (10%)
Query: 64 GYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFELLPFSSGRRM 123
G FP G Q+ ++++ D W +P +F+PERF +D+ F +P G
Sbjct: 303 GMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAWDEDS------FNFIPQGGGDHY 356
Query: 124 ----CPGVSFALQVMQFTLASLPHGFDIATPSNE 153
CPG L +M+ L + P +
Sbjct: 357 LGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQD 390
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 10/111 (9%)
Query: 50 VGTKRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRG 109
+G + ++ + P GT++F + + RDP + P F P+ FL D +G
Sbjct: 346 MGLAHRVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFL------DKKG 399
Query: 110 Q---NFELLPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDM 157
Q + +PFS G+R C G A + ++ F +P + P D+
Sbjct: 400 QFKKSDAFVPFSIGKRYCFGEGLARMELFLFFTTIMQNFRFKSPQS-PKDI 449
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 53 KRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNF 112
+R + + Y+ P+GT + + ++ L R+ ++ P ++ P+R+L D G+NF
Sbjct: 357 ERVVSSDLVLQNYHIPAGTLVQVFLYSLGRNAALFPRPERYNPQRWL----DIRGSGRNF 412
Query: 113 ELLPFSSGRRMCPG 126
+PF G R C G
Sbjct: 413 HHVPFGFGMRQCLG 426
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 10/113 (8%)
Query: 48 IQVGTKRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLT---RHKD 104
I +G R+ ++ + P GT+++ + + RDP + P F P+ FL + K
Sbjct: 344 IPMGLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKK 403
Query: 105 TDVRGQNFELLPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDM 157
+D +PFS G+R C G A + ++ F + + S P D+
Sbjct: 404 SDA------FVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKS-SQSPKDI 449
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 65/131 (49%), Gaps = 12/131 (9%)
Query: 54 RQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFE 113
R+++E+ + GY GT + +N+ ++ R + +P +F E F +V + F+
Sbjct: 375 RKALEDDVIDGYPVKKGTNIILNIGRMHR-LEFFPKPNEFTLENF-----AKNVPYRYFQ 428
Query: 114 LLPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERL-GLTV---EKST 169
PF G R C G A+ +M+ L +L F + T + ++ +++ L++ E
Sbjct: 429 --PFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQCVESIQKIHDLSLHPDETKN 486
Query: 170 PLEVLVSPRLS 180
LE++ +PR S
Sbjct: 487 MLEMIFTPRNS 497
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 6/130 (4%)
Query: 48 IQVGTKRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDV 107
I V +R + + + Y P+ T + + ++ L R+P + +P F P R+L++ K+
Sbjct: 347 ISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKNITY 406
Query: 108 RGQNFELLPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVEK 167
F L F G R C G A M L ++ F + D+G L +
Sbjct: 407 ----FRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQHLS--DVGTTFNLILMP 460
Query: 168 STPLEVLVSP 177
P+ P
Sbjct: 461 EKPISFTFWP 470
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 6/130 (4%)
Query: 48 IQVGTKRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDV 107
I V +R + + + Y P+ T + + ++ L R+P + +P F P R+L++ K+
Sbjct: 350 ISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKNITY 409
Query: 108 RGQNFELLPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVEK 167
F L F G R C G A M L ++ F + D+G L +
Sbjct: 410 ----FRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEI--QHLSDVGTTFNLILMP 463
Query: 168 STPLEVLVSP 177
P+ P
Sbjct: 464 EKPISFTFWP 473
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 11/89 (12%)
Query: 65 YNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFE----LLPFSSG 120
Y P GT + I++ + D + P F P FL G NF+ +PFS+G
Sbjct: 362 YLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDE-------GGNFKKSKYFMPFSAG 414
Query: 121 RRMCPGVSFALQVMQFTLASLPHGFDIAT 149
+R+C G + A + L S+ F++ +
Sbjct: 415 KRICVGEALAGMELFLFLTSILQNFNLKS 443
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 11/89 (12%)
Query: 65 YNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFE----LLPFSSG 120
Y P GT + I++ + D + P F P FL G NF+ +PFS+G
Sbjct: 360 YLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDE-------GGNFKKSKYFMPFSAG 412
Query: 121 RRMCPGVSFALQVMQFTLASLPHGFDIAT 149
+R+C G + A + L S+ F++ +
Sbjct: 413 KRICVGEALAGMELFLFLTSILQNFNLKS 441
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 55 QSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFEL 114
++ + GY P GT + + + D + +P KF+PE FL ++ + ++
Sbjct: 350 EATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLN--ENGKFKYSDY-F 406
Query: 115 LPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDM 157
PFS+G+R+C G A + L ++ F++ P +P D+
Sbjct: 407 KPFSTGKRVCAGEGLARMELFLLLCAILQHFNLK-PLVDPKDI 448
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 38/103 (36%), Gaps = 12/103 (11%)
Query: 52 TKRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQN 111
R + ++ T+ + P G + + + RDP + P +F P+R RH
Sbjct: 306 VSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDRAQIRH--------- 356
Query: 112 FELLPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEP 154
L F G C G A L +L F A S EP
Sbjct: 357 ---LGFGKGAHFCLGAPLARLEATVALPALAARFPEARLSGEP 396
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 10/113 (8%)
Query: 48 IQVGTKRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLT---RHKD 104
I + R+ ++ + P GT+++ + + RDP + P F P+ FL + K
Sbjct: 344 IPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKK 403
Query: 105 TDVRGQNFELLPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDM 157
+D +PFS G+R C G A + ++ F + + S P D+
Sbjct: 404 SDA------FVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKS-SQSPKDI 449
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 10/113 (8%)
Query: 48 IQVGTKRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLT---RHKD 104
I + R+ ++ + P GT+++ + + RDP + P F P+ FL + K
Sbjct: 344 IPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKK 403
Query: 105 TDVRGQNFELLPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDM 157
+D +PFS G+R C G A + ++ F + + S P D+
Sbjct: 404 SDA------FVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKS-SQSPKDI 449
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 10/113 (8%)
Query: 48 IQVGTKRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLT---RHKD 104
I + R+ ++ + P GT+++ + + RDP + P F P+ FL + K
Sbjct: 344 IPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKK 403
Query: 105 TDVRGQNFELLPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDM 157
+D +PFS G+R C G A + ++ F + + S P D+
Sbjct: 404 SDA------FVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKS-SQSPKDI 449
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 10/113 (8%)
Query: 48 IQVGTKRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLT---RHKD 104
I + R+ ++ + P GT+++ + + RDP + P F P+ FL + K
Sbjct: 344 IPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKK 403
Query: 105 TDVRGQNFELLPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDM 157
+D +PFS G+R C G A + ++ F + + S P D+
Sbjct: 404 SDA------FVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKS-SQSPKDI 449
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Query: 65 YNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFELLPFSSGRRMC 124
Y P GT + ++ + D + P F P FL + + + ++ +PFS+G+RMC
Sbjct: 358 YFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLD--ESGNFKKSDY-FMPFSAGKRMC 414
Query: 125 PGVSFALQVMQFTLASLPHGFDIATPSNEPLDM 157
G A + L S+ F + + EP D+
Sbjct: 415 VGEGLARMELFLFLTSILQNFKLQSLV-EPKDL 446
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 80 LQRDPHVWEEPCKFQPERFLTRHKDTDVR------GQNFELLPFSSGRRMCPGVSFAL-Q 132
+ DP ++ +P F+ +R+L + T + +PF SG +CPG FA+ +
Sbjct: 377 MHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHE 436
Query: 133 VMQFTLASLPH 143
+ QF + L +
Sbjct: 437 IKQFLILMLSY 447
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 80 LQRDPHVWEEPCKFQPERFLTRHKDTDVR------GQNFELLPFSSGRRMCPGVSFAL-Q 132
+ DP ++ +P F+ +R+L + T + +PF SG +CPG FA+ +
Sbjct: 377 MHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHE 436
Query: 133 VMQFTLASLPH 143
+ QF + L +
Sbjct: 437 IKQFLILMLSY 447
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 37/101 (36%), Gaps = 12/101 (11%)
Query: 54 RQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFE 113
R + + + G +G L +N DP + EP KF P R RH
Sbjct: 341 RTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFDPTRPANRH----------- 389
Query: 114 LLPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEP 154
L F +G C G+ A M+ L L D + EP
Sbjct: 390 -LAFGAGSHQCLGLHLARLEMRVLLDVLLDRVDSLELAGEP 429
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 65 YNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFELLPFSSGRRMC 124
Y P GT + + + D + P F P FL K+ + + ++ +PFS+G+R+C
Sbjct: 361 YLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFLD--KNGNFKKSDY-FMPFSAGKRIC 417
Query: 125 PGVSFALQVMQFTLASLPHGFDIAT 149
G A + L ++ F++ +
Sbjct: 418 AGEGLARMELFLFLTTILQNFNLKS 442
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 13/96 (13%)
Query: 60 CTVSGYNF--PSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFE---- 113
C V N+ P GT + ++ + D + P F P FL G NF+
Sbjct: 355 CDVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFLDE-------GGNFKKSNY 407
Query: 114 LLPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIAT 149
+PFS+G+R+C G A + L + F++ +
Sbjct: 408 FMPFSAGKRICVGEGLARMELFLFLTFILQNFNLKS 443
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 44/111 (39%), Gaps = 20/111 (18%)
Query: 43 RNELD--------IQVGTKRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQ 94
RN LD +++GT R + ++ G + G +F+ + RD V+ P F
Sbjct: 288 RNALDEVLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVF- 346
Query: 95 PERFLTRHKDTDVRGQNFELLPFSSGRRMCPGVSFALQVMQFTLASLPHGF 145
DVR L + G +CPGVS A + + ++ F
Sbjct: 347 -----------DVRRDTSASLAYGRGPHVCPGVSLARLEAEIAVGTIFRRF 386
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 20/96 (20%)
Query: 43 RNELD--------IQVGTKRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQ 94
RN LD +++GT R + ++ G + G +F+ + RD V+ P F
Sbjct: 288 RNALDEVLRFENILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVF- 346
Query: 95 PERFLTRHKDTDVRGQNFELLPFSSGRRMCPGVSFA 130
DVR L + G +CPGVS A
Sbjct: 347 -----------DVRRDTSASLAYGRGPHVCPGVSLA 371
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 12/81 (14%)
Query: 50 VGTKRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRG 109
VG R ++E+ + G +G ++++ RDP V+ +P + ER H
Sbjct: 291 VGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSPNPH------- 343
Query: 110 QNFELLPFSSGRRMCPGVSFA 130
+ F G CPG A
Sbjct: 344 -----VSFGFGPHYCPGGMLA 359
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 12/81 (14%)
Query: 50 VGTKRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRG 109
VG R ++E+ + G +G ++++ RDP V+ +P + ER H
Sbjct: 291 VGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSPNPH------- 343
Query: 110 QNFELLPFSSGRRMCPGVSFA 130
+ F G CPG A
Sbjct: 344 -----VSFGFGPHYCPGGMLA 359
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 12/81 (14%)
Query: 50 VGTKRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRG 109
VG R ++E+ + G +G ++++ RDP V+ +P + ER H
Sbjct: 291 VGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSPNPH------- 343
Query: 110 QNFELLPFSSGRRMCPGVSFA 130
+ F G CPG A
Sbjct: 344 -----VSFGFGPHYCPGGMLA 359
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 12/81 (14%)
Query: 50 VGTKRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRG 109
VG R ++E+ + G +G ++++ RDP V+ +P + ER H
Sbjct: 291 VGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSPNPH------- 343
Query: 110 QNFELLPFSSGRRMCPGVSFA 130
+ F G CPG A
Sbjct: 344 -----VSFGFGPHYCPGGMLA 359
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 12/81 (14%)
Query: 50 VGTKRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRG 109
VG R ++E+ + G +G ++++ RDP V+ +P + ER H
Sbjct: 291 VGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSPNPH------- 343
Query: 110 QNFELLPFSSGRRMCPGVSFA 130
+ F G CPG A
Sbjct: 344 -----VSFGFGPHYCPGGMLA 359
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 12/81 (14%)
Query: 50 VGTKRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRG 109
VG R ++E+ + G +G ++++ RDP V+ +P + ER H
Sbjct: 291 VGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSPNPH------- 343
Query: 110 QNFELLPFSSGRRMCPGVSFA 130
+ F G CPG A
Sbjct: 344 -----VSFGFGPHYCPGGMLA 359
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 12/81 (14%)
Query: 50 VGTKRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRG 109
VG R ++E+ + G +G ++++ RDP V+ +P + ER H
Sbjct: 291 VGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSPNPH------- 343
Query: 110 QNFELLPFSSGRRMCPGVSFA 130
+ F G CPG A
Sbjct: 344 -----VSFGFGPHYCPGGMLA 359
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 35.4 bits (80), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 12/77 (15%)
Query: 54 RQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFE 113
R + + T++G + PSGT + + RDP +++P F P R RH
Sbjct: 306 RVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGRKPNRH----------- 354
Query: 114 LLPFSSGRRMCPGVSFA 130
+ F G C G + A
Sbjct: 355 -ITFGHGMHHCLGSALA 370
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 81 QRDPHVWEEPCKFQPERFL----TRHKDTDVRGQNFEL--LPFSSGRRMCPGVSFALQVM 134
Q DP + ++P FQ +RFL T KD G + +P+ + +CPG FA+ +
Sbjct: 363 QMDPQIHQQPEMFQFDRFLNADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAI 422
Query: 135 QFTLASLPHGFDI 147
+ + ++ FD+
Sbjct: 423 KELVFTILTRFDV 435
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 34.7 bits (78), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 81 QRDPHVWEEPCKFQPERFL----TRHKDTDVRGQNFE--LLPFSSGRRMCPGVSFALQ-V 133
QRDP ++ +P F+ RFL + KD G+ + +P+ +G C G S+A+ +
Sbjct: 382 QRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSI 441
Query: 134 MQFTLASLPH 143
QF L H
Sbjct: 442 KQFVFLVLVH 451
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 34.7 bits (78), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 18/110 (16%)
Query: 54 RQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFE 113
R + E+ V G +G + +++ + RD +E P F R H
Sbjct: 295 RMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFDARRNARHH----------- 343
Query: 114 LLPFSSGRRMCPGVSFALQVMQFTL----ASLPHGFDIATPSNE-PLDMG 158
+ F G C G + A ++ L A +P G +A P +E P+ G
Sbjct: 344 -VGFGHGIHQCLGQNLARAELEIALGGLFARIP-GLRLAVPLDEVPIKAG 391
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 34.3 bits (77), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 81 QRDPHVWEEPCKFQPERFL----TRHKDTDVRGQNFE--LLPFSSGRRMCPGVSFALQ-V 133
QRDP ++ +P F+ RFL + KD G+ + +P+ +G C G S+A+ +
Sbjct: 370 QRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSI 429
Query: 134 MQFTLASLPH 143
QF L H
Sbjct: 430 KQFVFLVLVH 439
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 34.3 bits (77), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Query: 66 NFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFELLPFSSGRRMCP 125
P GT L ++ + QR + E FQPERFL G+ F PF G+R+C
Sbjct: 285 RLPQGTTLVLSPYVTQR--LYFPEGEAFQPERFLAERGTPS--GRYF---PFGLGQRLCL 337
Query: 126 GVSFAL 131
G FAL
Sbjct: 338 GRDFAL 343
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 33.9 bits (76), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 33/88 (37%), Gaps = 12/88 (13%)
Query: 54 RQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFE 113
R ++ + V G N G ++ ++ RD V+ P +F RF RH
Sbjct: 319 RTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDITRFPNRH----------- 367
Query: 114 LLPFSSGRRMCPGVSFALQVMQFTLASL 141
L F G MC G A M+ L
Sbjct: 368 -LGFGWGAHMCLGQHLAKLEMKIFFEEL 394
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 33.9 bits (76), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 8/80 (10%)
Query: 54 RQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQ--- 110
RQ ++ V G T +F + RDP +E QP+ F +D ++
Sbjct: 321 RQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFE-----QPDVFNIHREDLGIKSAFSG 375
Query: 111 NFELLPFSSGRRMCPGVSFA 130
L F SG C G +FA
Sbjct: 376 AARHLAFGSGIHNCVGTAFA 395
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 33.5 bits (75), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 9/103 (8%)
Query: 54 RQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFE 113
R+ M + V Y P G + + D + EP ++ PER D V G
Sbjct: 334 RKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER------DEKVEGA--- 384
Query: 114 LLPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLD 156
+ F +G C G F L ++ LA+ +D +E D
Sbjct: 385 FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPD 427
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 33.5 bits (75), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 9/103 (8%)
Query: 54 RQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFE 113
R+ M + V Y P G + + D + EP ++ PER D V G
Sbjct: 335 RKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER------DEKVEGA--- 385
Query: 114 LLPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLD 156
+ F +G C G F L ++ LA+ +D +E D
Sbjct: 386 FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPD 428
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 33.5 bits (75), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Query: 54 RQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLT-RHKDTDVRGQNF 112
R + E V G+ G + + R P + +P F P R+ R +D R +
Sbjct: 326 RVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNR---W 382
Query: 113 ELLPFSSGRRMCPGVSFALQVMQ--FTLASLPHGFDIATP 150
+PF +GR C G +FA+ ++ F++ + F++A P
Sbjct: 383 TWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQP 422
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 33.5 bits (75), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 9/103 (8%)
Query: 54 RQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFE 113
R+ M + V Y P G + + D + EP ++ PER D V G
Sbjct: 334 RKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER------DEKVEGA--- 384
Query: 114 LLPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLD 156
+ F +G C G F L ++ LA+ +D +E D
Sbjct: 385 FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPD 427
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 33.5 bits (75), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 9/103 (8%)
Query: 54 RQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFE 113
R+ M + V Y P G + + D + EP ++ PER D V G
Sbjct: 333 RKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER------DEKVEGA--- 383
Query: 114 LLPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLD 156
+ F +G C G F L ++ LA+ +D +E D
Sbjct: 384 FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPD 426
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 33.5 bits (75), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 39/108 (36%), Gaps = 15/108 (13%)
Query: 49 QVGTKRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVR 108
Q G +R + + + G G Q+ +V DP EEP +F R H
Sbjct: 285 QFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITRRPAPH------ 338
Query: 109 GQNFELLPFSSGRRMCPGVSFA---LQVMQFTLASLPHGFDIATPSNE 153
L F G C G A LQ++ TL G +A P E
Sbjct: 339 ------LAFGFGAHQCIGQQLARIELQIVFETLFRRLPGLRLAKPVEE 380
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 33.5 bits (75), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Query: 54 RQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLT-RHKDTDVRGQNF 112
R + E V G+ G + + R P + +P F P R+ R +D R +
Sbjct: 326 RVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNR---W 382
Query: 113 ELLPFSSGRRMCPGVSFALQVMQ--FTLASLPHGFDIATP 150
+PF +GR C G +FA+ ++ F++ + F++A P
Sbjct: 383 TWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQP 422
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 33.5 bits (75), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Query: 54 RQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLT-RHKDTDVRGQNF 112
R + E V G+ G + + R P + +P F P R+ R +D R +
Sbjct: 326 RVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNR---W 382
Query: 113 ELLPFSSGRRMCPGVSFALQVMQ--FTLASLPHGFDIATP 150
+PF +GR C G +FA+ ++ F++ + F++A P
Sbjct: 383 TWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQP 422
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 33.5 bits (75), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 9/103 (8%)
Query: 54 RQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFE 113
R+ M + V Y P G + + D + EP ++ PER D V G
Sbjct: 347 RKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER------DEKVEGA--- 397
Query: 114 LLPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLD 156
+ F +G C G F L ++ LA+ +D +E D
Sbjct: 398 FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPD 440
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 33.5 bits (75), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 39/108 (36%), Gaps = 15/108 (13%)
Query: 49 QVGTKRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVR 108
Q G +R + + + G G Q+ +V DP EEP +F R H
Sbjct: 285 QFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITRRPAPH------ 338
Query: 109 GQNFELLPFSSGRRMCPGVSFA---LQVMQFTLASLPHGFDIATPSNE 153
L F G C G A LQ++ TL G +A P E
Sbjct: 339 ------LAFGFGAHQCIGQQLARIELQIVFETLFRRLPGLRLAKPVEE 380
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 33.5 bits (75), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 39/108 (36%), Gaps = 15/108 (13%)
Query: 49 QVGTKRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVR 108
Q G +R + + + G G Q+ +V DP EEP +F R H
Sbjct: 285 QFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITRRPAPH------ 338
Query: 109 GQNFELLPFSSGRRMCPGVSFA---LQVMQFTLASLPHGFDIATPSNE 153
L F G C G A LQ++ TL G +A P E
Sbjct: 339 ------LAFGFGAHQCIGQQLARIELQIVFETLFRRLPGLRLAKPVEE 380
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 33.5 bits (75), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Query: 54 RQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLT-RHKDTDVRGQNF 112
R + E V G+ G + + R P + +P F P R+ R +D R +
Sbjct: 326 RVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNR---W 382
Query: 113 ELLPFSSGRRMCPGVSFALQVMQ--FTLASLPHGFDIATP 150
+PF +GR C G +FA+ ++ F++ + F++A P
Sbjct: 383 TWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQP 422
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 33.5 bits (75), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 9/103 (8%)
Query: 54 RQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFE 113
R+ M + V Y P G + + D + EP ++ PER D V G
Sbjct: 347 RKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER------DEKVEGA--- 397
Query: 114 LLPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLD 156
+ F +G C G F L ++ LA+ +D +E D
Sbjct: 398 FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPD 440
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 15/100 (15%)
Query: 54 RQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFE 113
R + + ++G G ++ + + RDP W++P ++ R + H
Sbjct: 303 RTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRYDITRKTSGH----------- 351
Query: 114 LLPFSSGRRMCPGVSFALQVMQFTLASLPH---GFDIATP 150
+ F SG MC G A + LA+L +IA P
Sbjct: 352 -VGFGSGVHMCVGQLVARLEGEVVLAALARKVAAIEIAGP 390
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 11/97 (11%)
Query: 50 VGTKRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRG 109
V R + E+ V+G P+GT +F+ RDP V+ + +F D V+
Sbjct: 292 VTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRF----------DITVK- 340
Query: 110 QNFELLPFSSGRRMCPGVSFALQVMQFTLASLPHGFD 146
+ + F G C G + A + +A+L D
Sbjct: 341 REAPSIAFGGGPHFCLGTALARLELTEAVAALATRLD 377
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 11/97 (11%)
Query: 50 VGTKRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRG 109
V R + E+ V+G P+GT +F+ RDP V+ + +F D V+
Sbjct: 302 VTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRF----------DITVK- 350
Query: 110 QNFELLPFSSGRRMCPGVSFALQVMQFTLASLPHGFD 146
+ + F G C G + A + +A+L D
Sbjct: 351 REAPSIAFGGGPHFCLGTALARLELTEAVAALATRLD 387
>pdb|4DNZ|A Chain A, The Crystal Structures Of Cyp199a4
pdb|4DNZ|B Chain B, The Crystal Structures Of Cyp199a4
pdb|4DNZ|C Chain C, The Crystal Structures Of Cyp199a4
pdb|4DNZ|D Chain D, The Crystal Structures Of Cyp199a4
pdb|4DO1|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|B Chain B, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|C Chain C, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|D Chain D, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4EGM|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGN|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGO|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGP|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
pdb|4EGP|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
Length = 410
Score = 30.0 bits (66), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 36/100 (36%), Gaps = 15/100 (15%)
Query: 54 RQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFE 113
R + E + G G ++ + + RDP W +P + R + H
Sbjct: 301 RTTTREVELGGAVIGEGEKVLMFLGSANRDPRRWSDPDLYDITRKTSGH----------- 349
Query: 114 LLPFSSGRRMCPGVSFAL---QVMQFTLASLPHGFDIATP 150
+ F SG MC G A +VM LA DI P
Sbjct: 350 -VGFGSGVHMCVGQLVARLEGEVMLSALARKVAAIDIDGP 388
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 29.6 bits (65), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Query: 66 NFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFELLPFSSGRRMCP 125
P GT L ++ + QR + + F+PERFL G+ F PF G+R+C
Sbjct: 285 RLPPGTTLVLSPYVTQR--LHFPDGEAFRPERFLEERGTPS--GRYF---PFGLGQRLCL 337
Query: 126 GVSFAL 131
G FAL
Sbjct: 338 GRDFAL 343
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/99 (20%), Positives = 41/99 (41%), Gaps = 4/99 (4%)
Query: 52 TKRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQN 111
K+ + E + + +G L+ RDP +++ +F PERF+ + +R
Sbjct: 368 AKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVL 427
Query: 112 FELLPFSS----GRRMCPGVSFALQVMQFTLASLPHGFD 146
+ P + G + C G F + V + + + +D
Sbjct: 428 WSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYD 466
>pdb|1I94|D Chain D, Crystal Structures Of The Small Ribosomal Subunit With
Tetracycline, Edeine And If3
pdb|1I95|D Chain D, Crystal Structure Of The 30s Ribosomal Subunit From
Thermus Thermophilus In Complex With Edeine
pdb|1I96|D Chain D, Crystal Structure Of The 30s Ribosomal Subunit From
Thermus Thermophilus In Complex With The Translation
Initiation Factor If3 (C-Terminal Domain)
pdb|1I97|D Chain D, Crystal Structure Of The 30s Ribosomal Subunit From
Thermus Thermophilus In Complex With Tetracycline
pdb|1J5E|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit
pdb|1N32|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Bound To Codon And Near-Cognate Transfer Rna
Anticodon Stem-Loop Mismatched At The First Codon
Position At The A Site With Paromomycin
pdb|1N33|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Bound To Codon And Near-Cognate Transfer Rna
Anticodon Stem-Loop Mismatched At The Second Codon
Position At The A Site With Paromomycin
pdb|1N34|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In The Presence Of Codon And
Crystallographically Disordered Near-Cognate Transfer
Rna Anticodon Stem-Loop Mismatched At The First Codon
Position
pdb|1N36|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In The Presence Of Crystallographically
Disordered Codon And Near-cognate Transfer Rna Anticodon
Stem-loop Mismatched At The Second Codon Position
pdb|1PNS|D Chain D, Crystal Structure Of A Streptomycin Dependent Ribosome
From E. Coli, 30s Subunit Of 70s Ribosome. This File,
1pns, Contains The 30s Subunit, Two Trnas, And One Mrna
Molecule. The 50s Ribosomal Subunit Is In File 1pnu.
pdb|1PNX|D Chain D, Crystal Structure Of The Wild Type Ribosome From E. Coli,
30s Subunit Of 70s Ribosome. This File, 1pnx, Contains
Only Molecules Of The 30s Ribosomal Subunit. The 50s
Subunit Is In The Pdb File 1pny.
pdb|1VOQ|D Chain D, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
pdb|1VOS|D Chain D, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
pdb|1VOV|D Chain D, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
pdb|1VOX|D Chain D, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
pdb|1VOZ|D Chain D, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
pdb|2E5L|D Chain D, A Snapshot Of The 30s Ribosomal Subunit Capturing Mrna Via
The Shine- Dalgarno Interaction
pdb|3FIC|D Chain D, T. Thermophilus 70s Ribosome In Complex With Mrna, Trnas
And Ef- Tu.Gdp.Kirromycin Ternary Complex, Fitted To A
6.4 A Cryo-Em Map. This File Contains The 30s Subunit
And The Ligands
pdb|2ZM6|D Chain D, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit
pdb|3MR8|D Chain D, Recognition Of The Amber Stop Codon By Release Factor Rf1.
This Entry 3mr8 Contains 30s Ribosomal Subunit. The 50s
Ribosomal Subunit Can Be Found In Pdb Entry 3ms1.
Molecule B In The Same Asymmetric Unit Is Deposited As
3mrz (50s) And 3ms0 (30s).
pdb|3MS0|D Chain D, Recognition Of The Amber Stop Codon By Release Factor Rf1.
This Entry 3ms0 Contains 30s Ribosomal Subunit. The 50s
Ribosomal Subunit Can Be Found In Pdb Entry 3mrz.
Molecule A In The Same Asymmetric Unit Is Deposited As
3mr8 (30s) And 3ms1 (50s).
pdb|3PYN|D Chain D, Crystal Structure Of A Complex Containing Domain 3 From
The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
File Contains The 30s Subunit Of The First 70s Ribosome.
pdb|3PYQ|D Chain D, Crystal Structure Of A Complex Containing Domain 3 From
The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
File Contains The 30s Subunit Of The Second 70s
Ribosome.
pdb|3PYS|D Chain D, Crystal Structure Of A Complex Containing Domain 3 Of Crpv
Igr Ires Rna Bound To The 70s Ribosome. This File
Contains The 30s Subunit Of The First 70s Ribosome.
pdb|3PYU|D Chain D, Crystal Structure Of A Complex Containing Domain 3 Of Crpv
Igr Ires Rna Bound To The 70s Ribosome. This File
Contains The 30s Subunit Of The Second 70s Ribosome.
pdb|3TVF|G Chain G, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Cognate
Trna-Leu Complex
pdb|3TVG|G Chain G, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The Second
70s Molecule In The Asymmetric Unit For The Cognate
Trna-Leu Complex
pdb|3UYD|G Chain G, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Leu Complex
pdb|3UYF|G Chain G, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Leu Complex
pdb|3UZ3|G Chain G, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Leu Complex With Paromomycin.
pdb|3UZ4|G Chain G, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The Second
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Leu Complex With Paromomycin.
pdb|3UZ6|G Chain G, Structure Analysis Of Ribosomal Decoding. This Entry
Contains The 30s Ribosomal Subunit Of The First 70s
Molecule In The Asymmetric Unit For The Cognate Trna-Tyr
Complex
pdb|3UZ7|G Chain G, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The Second
70s Molecule In The Asymmetric Unit For The Cognate
Trna-Tyr Complex.
pdb|3UZG|G Chain G, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Tyr Complex
pdb|3UZI|G Chain G, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The Second
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Tyr Complex
pdb|3UZL|G Chain G, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Tyr Complex With Paromomycin
pdb|3UZM|G Chain G, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The Second
70s Molecule In The Asymmetric Unit For The Near-cognate
Trna-tyr Complex With Paromomycin
pdb|4AQY|D Chain D, Structure Of Ribosome-Apramycin Complexes
pdb|4G5K|G Chain G, Crystal Structure Of The 70s Ribosome With Tetracycline.
This Entry Contains The 30s Subunit Of Molecule A.
pdb|4G5M|G Chain G, Crystal Structure Of The 70s Ribosome With Tetracycline.
This Entry Contains The 30s Subunit Of Molecule B.
pdb|4G5T|G Chain G, Crystal Structure Of The 70s Ribosome With Tigecycline.
This Entry Contains The 30s Subunit Of Molecule A.
pdb|4G5V|G Chain G, Crystal Structure Of The 70s Ribosome With Tigecycline.
This Entry Contains The 30s Subunit Of Molecule B
Length = 208
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 110 QNFELLPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPL 155
QN E + GR++ P +S ++ M+ LP D+A P NE L
Sbjct: 159 QNLEAM---KGRKVGPWLSLDVEGMKGKFLRLPDREDLALPVNEQL 201
>pdb|1FKA|D Chain D, Structure Of Functionally Activated Small Ribosomal
Subunit At 3.3 A Resolution
pdb|1HNW|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With Tetracycline
pdb|1HNX|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With Pactamycin
pdb|1HNZ|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With Hygromycin B
pdb|1IBK|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With The Antibiotic Paromomycin
pdb|1IBL|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With A Messenger Rna Fragment And
Cognate Transfer Rna Anticodon Stem-Loop Bound At The A
Site And With The Antibiotic Paromomycin
pdb|1IBM|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With A Messenger Rna Fragment And
Cognate Transfer Rna Anticodon Stem-Loop Bound At The A
Site
pdb|1XMO|D Chain D, Crystal Structure Of Mnm5u34t6a37-Trnalysuuu Complexed
With Aag-Mrna In The Decoding Center
pdb|1XMQ|D Chain D, Crystal Structure Of T6a37-Asllysuuu Aaa-Mrna Bound To The
Decoding Center
pdb|1XNQ|D Chain D, Structure Of An Inosine-Adenine Wobble Base Pair Complex
In The Context Of The Decoding Center
pdb|1XNR|D Chain D, Crystal Structure Of An Inosine-Cytosine Wobble Base Pair
In The Context Of The Decoding Center
pdb|1YL4|G Chain G, Crystal Structure Of 70s Ribosome With Thrs Operator And
Trnas. 30s Subunit. The Coordinates For The 50s Subunit
Are In The Pdb Entry 1yl3
pdb|2B64|D Chain D, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf1
From A Crystal Structure Of The Whole Ribosomal Complex.
This File Contains The 30s Subunit, Trnas, Mrna And
Release Factor Rf1 From A Crystal Structure Of The Whole
Ribosomal Complex". The Entire Crystal Structure
Contains One 70s Ribosome, Trnas, Mrna And Release
Factor Rf1 And Is Described In Remark 400.
pdb|2B9M|D Chain D, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf2
From A Crystal Structure Of The Whole Ribosomal Complex.
This File Contains The 30s Ribosomal Subunit, Trnas,
Mrna And Release Factor Rf2 From A Crystal Structure Of
The Whole Ribosomal Complex". The Entire Crystal
Structure Contains One 70s Ribosome, Trnas, Mrna And
Release Factor Rf2 And Is Described In Remark 400.
pdb|2B9O|D Chain D, 30s Ribosomal Subunit, Trnas And Mrna From A Crystal
Structure Of The Whole Ribosomal Complex With A Stop
Codon In The A-Site. This File Contains The 30s Subunit,
Trnas And Mrna From A Crystal Structure Of The Whole
Ribosomal Complex With A Stop Codon In The A-Site And Is
Described In Remark 400.
pdb|2HHH|D Chain D, Crystal Structure Of Kasugamycin Bound To The 30s
Ribosomal Subunit
pdb|2J00|D Chain D, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Mrna, Trna And Paromomycin (Part 1 Of 4).
This File Contains The 30s Subunit, Mrna, A-, P- And
E-Site Trnas And Paromomycin For Molecule I.
pdb|2J02|D Chain D, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Mrna, Trna And Paromomycin (Part 3 Of 4)
This File Contains The 30s Subunit, Mrna, A-, P- And
E-Site Trnas And Paromomycin For Molecule Ii.
pdb|2HGI|G Chain G, Crystal Structure Of The 70s Thermus Thermophilus Ribosome
Showing How The 16s 3'-End Mimicks Mrna E And P Codons.
This Entry 2hgi Contains 30s Ribosomal Subunit. The 50s
Ribosomal Subunit Can Be Found In Pdb Entry 2hgj.
pdb|2HGP|G Chain G, Crystal Structure Of The 70s Thermus Thermophilus Ribosome
With Translocated And Rotated Shine-Dalgarno Duplex.
This Entry 2hgp Contains 30s Ribosomal Subunit. The 50s
Ribosomal Subunit Can Be Found In Pdb Entry 2hgq.
pdb|2HGR|G Chain G, 70s T.Th. Ribosome Functional Complex With Mrna And E- And
P-Site Trnas At 4.5a. This Entry 2hgr Contains 30s
Ribosomal Subunit. The 50s Ribosomal Subunit Can Be
Found In Pdb Entry 2hgu.
pdb|2OW8|EE Chain e, Crystal Structure Of A 70s Ribosome-Trna Complex Reveals
Functional Interactions And Rearrangements. This File,
2ow8, Contains The 30s Ribosome Subunit, Two Trna, And
Mrna Molecules. 50s Ribosome Subunit Is In The File
1vsa.
pdb|2UU9|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-asl With Cmo5u In
Position 34 Bound To An Mrna With A Gug-codon In The
A-site And Paromomycin.
pdb|2UUA|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-Asl With Cmo5u In
Position 34 Bound To An Mrna With A Guc-Codon In The
A-Site And Paromomycin.
pdb|2UUB|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-Asl With Cmo5u In
Position 34 Bound To An Mrna With A Guu-Codon In The
A-Site And Paromomycin.
pdb|2UUC|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-asl With Cmo5u In
Position 34 Bound To An Mrna With A Gua-codon In The
A-site And Paromomycin.
pdb|2UXC|D Chain D, Crystal Structure Of An Extended Trna Anticodon Stem Loop
In Complex With Its Cognate Mrna Ucgu In The Context Of
The Thermus Thermophilus 30s Subunit.
pdb|2UXB|D Chain D, Crystal Structure Of An Extended Trna Anticodon Stem Loop
In Complex With Its Cognate Mrna Gggu In The Context Of
The Thermus Thermophilus 30s Subunit.
pdb|2V46|D Chain D, Structure Of The Ribosome Recycling Factor Bound To The
Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And
Trna-Fmet (Part 1 Of 4). This File Contains The 30s
Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For
Molecule 1.
pdb|2V48|D Chain D, Structure Of The Ribosome Recycling Factor Bound To The
Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And
Trna-Fmet (Part 3 Of 4). This File Contains The 30s
Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For
Molecule 2.
pdb|2UXD|D Chain D, Crystal Structure Of An Extended Trna Anticodon Stem Loop
In Complex With Its Cognate Mrna Cggg In The Context Of
The Thermus Thermophilus 30s Subunit.
pdb|2QNH|EE Chain e, Interactions And Dynamics Of The Shine-Dalgarno Helix In
The 70s Ribosome. This File, 2qnh, Contains The 30s
Ribosome Subunit, Two Trna, And Mrna Molecules. 50s
Ribosome Subunit Is In The File 1vsp.
pdb|2VQE|D Chain D, Modified Uridines With C5-methylene Substituents At The
First Position Of The Trna Anticodon Stabilize U-g
Wobble Pairing During Decoding
pdb|2VQF|D Chain D, Modified Uridines With C5-Methylene Substituents At The
First Position Of The Trna Anticodon Stabilize U-G
Wobble Pairing During Decoding
pdb|2ZKQ|DD Chain d, Structure Of A Mammalian Ribosomal 40s Subunit Within An
80s Complex Obtained By Docking Homology Models Of The
Rna And Proteins Into An 8.7 A Cryo-Em Map
pdb|3D5A|D Chain D, Structural Basis For Translation Termination On The 70s
Ribosome. This File Contains The 30s Subunit, Release
Factor 1 (Rf1), Two Trna, And Mrna Molecules Of One 70s
Ribosome. The Entire Crystal Structure Contains Two 70s
Ribosomes As Described In Remark 400.
pdb|3D5C|D Chain D, Structural Basis For Translation Termination On The 70s
Ribosome. This File Contains The 30s Subunit, Release
Factor 1 (Rf1), Two Trna, And Mrna Molecules Of The
Second 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes As Described In Remark 400.
pdb|3F1E|D Chain D, Crystal Structure Of A Translation Termination Complex
Formed With Release Factor Rf2. This File Contains The
30s Subunit, Rf2, Two Trna, And Mrna Molecules Of One
70s Ribosome. The Entire Crystal Structure Contains Two
70s Ribosomes As Described In Remark 400.
pdb|3F1G|D Chain D, Crystal Structure Of A Translation Termination Complex
Formed With Release Factor Rf2. This File Contains The
30s Subunit, Rf2, Two Trna, And Mrna Molecules Of The
Second 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes As Described In Remark 400.
pdb|2WDG|D Chain D, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A-Site Trna,
Deacylated P-Site Trna, And E-Site Trna. This File
Contains The 30s Subunit A-,P-, And E-Site Trnas And
Paromomycin For Molecule I.
pdb|2WDH|D Chain D, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A-Site Trna,
Deacylated P-Site Trna, And E-Site Trna. This File
Contains The 30s Subunit A-,P-, And E-Site Trnas And
Paromomycin For Molecule Ii.
pdb|2WDK|D Chain D, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A- And P-Site
Trnas, And E-Site Trna. This File Contains The 30s
Subunit A-,P-, And E-Site Trnas And Paromomycin For
Molecule I.
pdb|2WDM|D Chain D, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A- And P-Site
Trnas, And E-Site Trna. This File Contains The 30s
Subunit A-,P-, And E-Site Trnas And Paromomycin For
Molecule Ii.
pdb|2WH1|D Chain D, Insights Into Translational Termination From The Structure
Of Rf2 Bound To The Ribosome
pdb|2WH3|D Chain D, Insights Into Translational Termination From The Structure
Of Rf2 Bound To The Ribosome). This File Contains The
30s Subunit.
pdb|3HUW|D Chain D, Structure Of Ef-P Bound To The 70s Ribosome; This File
Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P For
Molecule I.
pdb|3HUY|D Chain D, Structure Of Ef-P Bound To The 70s Ribosome; This File
Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P For
Molecule Ii.
pdb|2WRI|D Chain D, The Structure Of The Ribosome With Elongation Factor G
Trapped In The Post-Translocational State (Part 1 Of 4).
pdb|2WRK|D Chain D, The Structure Of The Ribosome With Elongation Factor G
Trapped In The Post-Translocational State (Part 3 Of 4).
pdb|2WRN|D Chain D, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
And Trna (Part 1 Of 4).
pdb|2WRQ|D Chain D, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
And Trna (Part 3 Of 4).
pdb|3KIQ|DD Chain d, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Precleavage State; Part 1 Of 4)
pdb|3KIS|DD Chain d, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Precleavage State; Part 3 Of 4)
pdb|3KIU|DD Chain d, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Postcleavage State; Part 1 Of 4)
pdb|3KIX|DD Chain d, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Postcleavage State; Part 3 Of 4)
pdb|3KNH|D Chain D, The Structures Of Viomycin Bound To The 70s Ribosome. This
File Contains The 30s Subunit For Molecule I
pdb|3KNJ|D Chain D, The Structures Of Viomycin Bound To The 70s Ribosome. This
File Contains The 30s Subunit For Molecule Ii'
pdb|3KNL|D Chain D, The Structures Of Capreomycin Bound To The 70s Ribosome.
This File Contains The 30s Subunit For Molecule I
pdb|3KNN|D Chain D, The Structures Of Capreomycin Bound To The 70s Ribosome.
This File Contains The 30s Subunit For Molecule Ii
pdb|3I8G|G Chain G, Elongation Complex Of The 70s Ribosome With Three Trnas
And Entry 3i8g Contains 30s Ribosomal Subnit.The 50s
Ribosomal Can Be Found In Pdb Entry 3i8f. Molecule B In
The Same Asym Unit Is Deposited As 3i8g (30s) And 3i8f
(50s).
pdb|3I8H|G Chain G, Elongation Complex Of The 70s Ribosome With Three Trnas
And Entry 3i8h Contains 30s Ribosomal Subnit. The 50s
Ribosomal Can Be Found In Pdb Entry 3i8i. Molecule A In
The Same Asym Unit Is Deposited As 3i8f (50s) And 3i8g
(30s).
pdb|3I9B|G Chain G, Initiation Complex Of 70s Ribosome With Two Trnas And
Mrna. 3i9b Contains 30s Ribosomal Subunit Of Molecule B.
The 50s Subunit Can Be Found In Pdb Entry 3i9c. Molecule
A In The S Asymmetric Unit Is Deposited As 3i9d (30s)
And 3i9e (50s)
pdb|3I9D|G Chain G, Initiation Complex Of 70s Ribosome With Two Trnas And
Mrna. 3i9d Contains 30s Ribosomal Subunit Of Molecule A.
The 50s Subunit Can Be Found In Pdb Entry 3i9e. Molecule
B In The S Asymmetric Unit Is Deposited As 3i9b (30s)
And 3i9c (50s)
pdb|2X9R|D Chain D, Structure Of The 70s Ribosome Bound To Release Factor 2
And A Substrate Analog Provides Insights Into Catalysis
Of Peptide Release
pdb|2X9T|D Chain D, Structure Of The 70s Ribosome Bound To Release Factor 2
And A Substrate Analog Provides Insights Into Catalysis
Of Peptide Release
pdb|2XFZ|D Chain D, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
70s Ribosome (Part 1 Of 4)
pdb|2XG1|D Chain D, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
70s Ribosome (Part 3 Of 4)
pdb|3OTO|D Chain D, Crystal Structure Of The 30s Ribosomal Subunit From A Ksga
Mutant Of Thermus Thermophilus (Hb8)
pdb|3OGE|D Chain D, Structure Of The Thermus Thermophilus Ribosome Complexed
With Chloramphenicol. This File Contains The 30s Subunit
Of One 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes.
pdb|3OGY|D Chain D, Structure Of The Thermus Thermophilus Ribosome Complexed
With Chloramphenicol. This File Contains The 30s Subunit
Of One 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes.
pdb|3OHC|D Chain D, Structure Of The Thermus Thermophilus Ribosome Complexed
With Erythromycin. This File Contains The 30s Subunit Of
One 70s Ribosome. The Entire Crystal Structure Contains
Two 70s Ribosomes.
pdb|3OHD|D Chain D, Structure Of The Thermus Thermophilus Ribosome Complexed
With Erythromycin. This File Contains The 30s Subunit Of
One 70s Ribosome. The Entire Crystal Structure Contains
Two 70s Ribosomes.
pdb|3OHY|D Chain D, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Azithromycin. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
pdb|3OI0|D Chain D, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Azithromycin. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
pdb|3OI2|D Chain D, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Telithromycin. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
pdb|3OI4|D Chain D, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Telithromycin. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
pdb|2XQD|D Chain D, The Structure Of Ef-Tu And Aminoacyl-Trna Bound To The 70s
Ribosome With A Gtp Analog
pdb|2XSY|D Chain D, Trna Tranlocation On The 70s Ribosome: The Pre-
Translocational Translocation Intermediate Ti(Pre)
pdb|2XUY|D Chain D, Trna Translocation On The 70s Ribosome: The Post-
Translocational Translocation Intermediate Ti(Post)
pdb|2Y0U|D Chain D, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A
Near-Cognate Codon On The 70s Ribosome
pdb|2Y0W|D Chain D, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A
Near-Cognate Codon On The 70s Ribosome
pdb|2Y0Y|D Chain D, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
A Near-Cognate Codon On The 70s Ribosome
pdb|2Y10|D Chain D, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A
Cognate Codon On The 70s Ribosome.
pdb|2Y12|D Chain D, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
A Near-Cognate Codon On The 70s Ribosome
pdb|2Y14|D Chain D, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
A Cognate Codon On The 70s Ribosome.
pdb|2Y16|D Chain D, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
A Cognate Codon On The 70s Ribosome.
pdb|2Y18|D Chain D, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A
Cognate Codon On The 70s Ribosome.
pdb|3ZVO|D Chain D, Crystal Structure Of The Hybrid State Of Ribosome In
Complex With The Guanosine Triphosphatase Release Factor
3
pdb|3T1H|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Human Anti-Codon Stem Loop
(Hasl) Of Transfer Rna Lysine 3 (Trnalys3) Bound To An
Mrna With An Aaa-Codon In The A-Site And Paromomycin
pdb|3T1Y|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Human Anti-Codon Stem Loop
(Hasl) Of Transfer Rna Lysine 3 (Trnalys3) Bound To An
Mrna With An Aag-Codon In The A-Site And Paromomycin
pdb|3UXS|D Chain D, The Structure Of Thermorubin In Complex With The 70s
Ribosome From Thermus Thermophilus. This File Contains
The 30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
pdb|3UXT|D Chain D, The Structure Of Thermorubin In Complex With The 70s
Ribosome From Thermus Thermophilus. This File Contains
The 30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.'
pdb|4ABR|D Chain D, Complex Of Smpb, A Tmrna Fragment And Ef-Tu-Gdp-Kirromycin
With The 70s Ribosome
pdb|4DH9|D Chain D, Crystal Structure Of Yaej Bound To The 70s Ribosome
pdb|4DHB|D Chain D, Crystal Structure Of Yaej Bound To The 70s Ribosome
pdb|3V22|D Chain D, Crystal Structure Of Rmf Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 30s Subunit With
Bound Rmf Of The 1st Ribosome In The Asu
pdb|3V24|D Chain D, Crystal Structure Of Rmf Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 30s Subunit With
Bound Rmf Of The 2nd Ribosome In The Asu
pdb|3V26|D Chain D, Crystal Structure Of Hpf Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 30s Subunit With
Bound Hpf Of The 1st Ribosome In The Asu
pdb|3V28|D Chain D, Crystal Structure Of Hpf Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 30s Subunit With
Bound Hpf Of The 2nd Ribosome In The Asu
pdb|3V2C|D Chain D, Crystal Structure Of Yfia Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 30s Subunit With
Bound Yfia Of The 1st Ribosome In The Asu
pdb|3V2E|D Chain D, Crystal Structure Of Yfia Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 30s Subunit With
Bound Yfia Of The 2nd Ribosome In The Asu
pdb|4DR1|D Chain D, Crystal Structure Of The Apo 30s Ribosomal Subunit From
Thermus Thermophilus (hb8)
pdb|4DR2|D Chain D, Crystal Structure Of The Thermus Thermophilus (hb8) 30s
Ribosomal Subunit With Multiple Copies Of Paromomycin
Molecules Bound
pdb|4DR3|D Chain D, Crystal Structure Of The Thermus Thermophilus (hb8) 30s
Ribosomal Subunit With Streptomycin Bound
pdb|4DR4|D Chain D, Crystal Structure Of The Thermus Thermophilus (hb8) 30s
Ribosomal Subunit With Codon, Cognate Transfer Rna
Anticodon Stem-loop And Multiple Copies Of Paromomycin
Molecules Bound
pdb|4DR5|D Chain D, Crystal Structure Of The Thermus Thermophilus (hb8) 30s
Ribosomal Subunit With Codon, Crystallographically
Disordered Cognate Transfer Rna Anticodon Stem-loop And
Streptomycin Bound
pdb|4DR6|D Chain D, Crystal Structure Of The Thermus Thermophilus (hb8) 30s
Ribosomal Subunit With Codon, Near-cognate Transfer Rna
Anticodon Stem-loop Mismatched At The First Codon
Position And Streptomycin Bound
pdb|4DR7|D Chain D, Crystal Structure Of The Thermus Thermophilus (hb8) 30s
Ribosomal Subunit With Codon, Crystallographically
Disordered Near-cognate Transfer Rna Anticodon Stem-loop
Mismatched At The Second Codon Position, And
Streptomycin Bound
pdb|4DUY|D Chain D, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, U13c
pdb|4DUZ|D Chain D, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, U13c, Bound
With Streptomycin
pdb|4DV0|D Chain D, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, U20g
pdb|4DV1|D Chain D, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, U20g, Bound
With Streptomycin
pdb|4DV2|D Chain D, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, C912a
pdb|4DV3|D Chain D, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, C912a, Bound
With Streptomycin
pdb|4DV4|D Chain D, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, A914g
pdb|4DV5|D Chain D, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, A914g, Bound
With Streptomycin
pdb|4DV6|D Chain D, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, A915g
pdb|4DV7|D Chain D, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, A915g, Bound
With Streptomycin
Length = 209
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 110 QNFELLPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPL 155
QN E + GR++ P +S ++ M+ LP D+A P NE L
Sbjct: 160 QNLEAM---KGRKVGPWLSLDVEGMKGKFLRLPDREDLALPVNEQL 202
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/99 (20%), Positives = 41/99 (41%), Gaps = 4/99 (4%)
Query: 52 TKRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQN 111
K+ + E + + +G L+ RDP +++ +F PERF+ + +R
Sbjct: 368 AKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVL 427
Query: 112 FELLPFSS----GRRMCPGVSFALQVMQFTLASLPHGFD 146
+ P + G + C G F + V + + + +D
Sbjct: 428 WSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYD 466
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,008,087
Number of Sequences: 62578
Number of extensions: 191616
Number of successful extensions: 523
Number of sequences better than 100.0: 131
Number of HSP's better than 100.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 341
Number of HSP's gapped (non-prelim): 140
length of query: 185
length of database: 14,973,337
effective HSP length: 93
effective length of query: 92
effective length of database: 9,153,583
effective search space: 842129636
effective search space used: 842129636
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 48 (23.1 bits)