Query 047802
Match_columns 185
No_of_seqs 137 out of 1667
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 03:22:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047802.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/047802hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0158 Cytochrome P450 CYP3/C 100.0 1.1E-45 2.3E-50 303.1 18.2 174 1-179 290-499 (499)
2 PLN02971 tryptophan N-hydroxyl 100.0 5.9E-44 1.3E-48 300.9 17.3 183 1-184 323-539 (543)
3 PLN02394 trans-cinnamate 4-mon 100.0 4E-43 8.7E-48 293.5 18.6 179 1-179 289-502 (503)
4 KOG0157 Cytochrome P450 CYP4/C 100.0 2.2E-43 4.8E-48 294.3 16.7 176 1-180 287-497 (497)
5 KOG0156 Cytochrome P450 CYP2 s 100.0 5.4E-43 1.2E-47 289.3 17.9 174 1-179 282-488 (489)
6 PLN02169 fatty acid (omega-1)- 100.0 1.7E-42 3.7E-47 289.5 17.4 176 1-179 297-500 (500)
7 PLN00168 Cytochrome P450; Prov 100.0 2.8E-42 6E-47 289.5 18.6 179 1-179 302-517 (519)
8 PLN03234 cytochrome P450 83B1; 100.0 3.9E-42 8.5E-47 287.3 18.2 178 1-178 284-498 (499)
9 PLN00110 flavonoid 3',5'-hydro 100.0 5.9E-42 1.3E-46 286.5 18.0 184 1-184 285-502 (504)
10 PLN02183 ferulate 5-hydroxylas 100.0 1.1E-41 2.3E-46 285.8 17.9 177 1-178 300-511 (516)
11 PLN03112 cytochrome P450 famil 100.0 1.5E-41 3.3E-46 284.6 18.6 185 1-185 292-514 (514)
12 PTZ00404 cytochrome P450; Prov 100.0 1.1E-41 2.5E-46 283.4 17.6 166 5-178 283-482 (482)
13 PLN02738 carotene beta-ring hy 100.0 1.9E-41 4.2E-46 288.9 19.3 180 1-181 387-597 (633)
14 PF00067 p450: Cytochrome P450 100.0 1.2E-41 2.7E-46 278.1 15.8 173 1-175 258-463 (463)
15 PLN02290 cytokinin trans-hydro 100.0 3.4E-41 7.4E-46 282.7 18.2 173 1-180 312-516 (516)
16 PLN02500 cytochrome P450 90B1 100.0 3.2E-41 6.9E-46 281.3 17.8 173 1-177 275-488 (490)
17 PLN02655 ent-kaurene oxidase 100.0 5.9E-41 1.3E-45 278.1 18.3 176 1-180 258-465 (466)
18 PLN03018 homomethionine N-hydr 100.0 1.5E-40 3.2E-45 279.5 19.7 183 1-184 310-529 (534)
19 PLN02687 flavonoid 3'-monooxyg 100.0 8.3E-41 1.8E-45 280.4 18.0 185 1-185 293-515 (517)
20 PLN02426 cytochrome P450, fami 100.0 1E-40 2.3E-45 278.7 17.8 176 2-179 290-500 (502)
21 PLN03195 fatty acid omega-hydr 100.0 1.1E-40 2.4E-45 279.7 17.3 175 1-179 288-516 (516)
22 PLN03141 3-epi-6-deoxocathaste 100.0 1.5E-40 3.3E-45 274.8 17.4 170 1-181 247-452 (452)
23 KOG0159 Cytochrome P450 CYP11/ 100.0 1.2E-40 2.6E-45 269.7 16.2 175 1-180 312-519 (519)
24 PLN02774 brassinosteroid-6-oxi 100.0 2.9E-40 6.3E-45 273.8 17.6 168 1-177 260-462 (463)
25 PLN02966 cytochrome P450 83A1 100.0 3.6E-40 7.8E-45 275.7 18.2 175 1-179 285-498 (502)
26 PLN02936 epsilon-ring hydroxyl 100.0 8.3E-40 1.8E-44 272.7 18.5 177 1-179 274-482 (489)
27 PLN02302 ent-kaurenoic acid ox 100.0 4.7E-39 1E-43 268.0 17.9 171 1-180 283-489 (490)
28 PLN02196 abscisic acid 8'-hydr 100.0 3.5E-39 7.5E-44 267.4 16.3 168 1-178 260-462 (463)
29 KOG0684 Cytochrome P450 [Secon 100.0 3.6E-39 7.9E-44 256.4 15.0 178 1-179 269-485 (486)
30 PLN02987 Cytochrome P450, fami 100.0 1.6E-38 3.4E-43 263.9 18.8 172 1-179 263-469 (472)
31 COG2124 CypX Cytochrome P450 [ 100.0 5.5E-36 1.2E-40 244.8 13.6 163 1-178 232-410 (411)
32 PLN02648 allene oxide synthase 100.0 2.4E-31 5.2E-36 220.8 15.2 147 1-152 267-462 (480)
33 PF12554 MOZART1: Mitotic-spin 75.3 11 0.00023 21.2 4.3 42 5-46 6-47 (48)
34 PF05952 ComX: Bacillus compet 66.1 8 0.00017 22.6 2.6 20 26-45 3-22 (57)
35 PF08492 SRP72: SRP72 RNA-bind 57.7 8.3 0.00018 22.7 1.6 9 94-102 44-52 (59)
36 PF12508 DUF3714: Protein of u 52.8 12 0.00027 27.8 2.3 21 55-75 74-94 (200)
37 PF14129 DUF4296: Domain of un 47.1 71 0.0015 20.1 6.1 42 9-50 37-78 (87)
38 PF09201 SRX: SRX; InterPro: 42.6 22 0.00047 24.9 2.0 23 122-144 18-40 (148)
39 PF08285 DPM3: Dolichol-phosph 40.1 45 0.00098 21.5 3.1 28 24-51 55-82 (91)
40 PF11138 DUF2911: Protein of u 38.5 41 0.00089 23.7 3.0 40 56-96 52-98 (145)
41 KOG3506 40S ribosomal protein 35.7 16 0.00036 21.0 0.5 11 115-125 12-22 (56)
42 PF14483 Cut8_M: Cut8 dimerisa 33.7 75 0.0016 16.8 2.9 21 24-44 14-35 (38)
43 PF15080 DUF4547: Domain of un 32.4 1.8E+02 0.004 21.0 5.4 49 1-49 113-171 (196)
44 PF02663 FmdE: FmdE, Molybdenu 31.6 41 0.00089 23.0 2.1 22 122-143 5-26 (131)
45 PF11227 DUF3025: Protein of u 31.3 30 0.00065 26.0 1.4 27 71-97 184-211 (212)
46 TIGR03779 Bac_Flav_CT_M Bacter 25.0 57 0.0012 27.2 2.1 21 55-75 277-297 (410)
47 COG0851 MinE Septum formation 24.7 2E+02 0.0043 18.4 4.3 44 10-53 3-53 (88)
48 PF14824 Sirohm_synth_M: Siroh 23.1 1.1E+02 0.0023 15.3 2.1 16 34-49 14-29 (30)
49 PHA03162 hypothetical protein; 22.5 56 0.0012 22.6 1.4 23 118-140 2-24 (135)
No 1
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.1e-45 Score=303.09 Aligned_cols=174 Identities=29% Similarity=0.486 Sum_probs=158.2
Q ss_pred CchhhHHHHHHHHHHhhhhcHHHHHHHHHHHHhhChHHHHHHHHHHhHhhCCC---------------------------
Q 047802 1 MTTLYTLPILQALILAATDTTAVTLTWIISPLLNHHDILNKARNELDIQVGTK--------------------------- 53 (185)
Q Consensus 1 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~--------------------------- 53 (185)
||.++|+++++.+++||.||||++++.++|+|++||++|+|||+||+++....
T Consensus 290 lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~ 369 (499)
T KOG0158|consen 290 LTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPP 369 (499)
T ss_pred cCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCC
Confidence 68999999999999999999999999999999999999999999999985432
Q ss_pred -----Cccccceeee-ceeeCCCCEEEEchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCCccceeeccCCCCCCcch
Q 047802 54 -----RQSMEECTVS-GYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFELLPFSSGRRMCPGV 127 (185)
Q Consensus 54 -----r~~~~d~~i~-~~~i~~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~fg~G~~~C~G~ 127 (185)
|.|++|+++. ++.|+||+.|.++.+++||||++|+||++|+||||.+.+.. ..++..|+|||.|||.|+|+
T Consensus 370 ~~~~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~PERF~~~~~~---~~~~~~ylPFG~GPR~CIGm 446 (499)
T KOG0158|consen 370 APFLNRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEKFKPERFEEENNK---SRHPGAYLPFGVGPRNCIGM 446 (499)
T ss_pred cccccceecCceecCCCeEeCCCCEEEeecccccCCcccCCCcccCCCccCCCCccc---ccCCccccCCCCCccccHHH
Confidence 9999999999 99999999999999999999999999999999999987622 45788999999999999999
Q ss_pred HHHHHHHHHHHHHhcccceeecCCCCCCCCcccc---eeeeecCCCeEEEEEecC
Q 047802 128 SFALQVMQFTLASLPHGFDIATPSNEPLDMGERL---GLTVEKSTPLEVLVSPRL 179 (185)
Q Consensus 128 ~la~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~---~~~~~~~~~~~v~~~~R~ 179 (185)
+||++|+|+.+++||++|+++..+.+... ... ++.+.|+.++++++.+|.
T Consensus 447 Rfa~mq~K~~L~~lL~~f~~~~~~~t~~~--~~~~~~~~~l~pk~gi~Lkl~~r~ 499 (499)
T KOG0158|consen 447 RFALMEAKLALAHLLRNFSFEVCPTTIIP--LEGDPKGFTLSPKGGIWLKLEPRD 499 (499)
T ss_pred HHHHHHHHHHHHHHHhhCEEecCCcccCc--ccCCccceeeecCCceEEEEEeCC
Confidence 99999999999999999999988743222 333 677899999999999985
No 2
>PLN02971 tryptophan N-hydroxylase
Probab=100.00 E-value=5.9e-44 Score=300.91 Aligned_cols=183 Identities=30% Similarity=0.595 Sum_probs=160.7
Q ss_pred CchhhHHHHHHHHHHhhhhcHHHHHHHHHHHHhhChHHHHHHHHHHhHhhCCC---------------------------
Q 047802 1 MTTLYTLPILQALILAATDTTAVTLTWIISPLLNHHDILNKARNELDIQVGTK--------------------------- 53 (185)
Q Consensus 1 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~--------------------------- 53 (185)
|++++|.+++.++++||+|||+++++|++++|++||++|+|+++||+++++..
T Consensus 323 ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~ 402 (543)
T PLN02971 323 LTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPV 402 (543)
T ss_pred CCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCC
Confidence 57899999999999999999999999999999999999999999999988642
Q ss_pred ------CccccceeeeceeeCCCCEEEEchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCCccceeeccCCCCCCcch
Q 047802 54 ------RQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFELLPFSSGRRMCPGV 127 (185)
Q Consensus 54 ------r~~~~d~~i~~~~i~~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~fg~G~~~C~G~ 127 (185)
|.+.+|++++||.||||+.|.++.+++|||+++|+||++|+|+||++...+......+..|+|||.|+|.|+|+
T Consensus 403 ~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~ 482 (543)
T PLN02971 403 AAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAP 482 (543)
T ss_pred cccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCH
Confidence 77889999999999999999999999999999999999999999997542111122467899999999999999
Q ss_pred HHHHHHHHHHHHHhcccceeecCCCC-CCCCcccceeeeecCCCeEEEEEecCCCCCC
Q 047802 128 SFALQVMQFTLASLPHGFDIATPSNE-PLDMGERLGLTVEKSTPLEVLVSPRLSASLY 184 (185)
Q Consensus 128 ~la~~~~~~~~~~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~R~~~~~~ 184 (185)
+||++|++++++.|+++|+|++.+++ +++.....+ .+..++++.+.+.+|..+++|
T Consensus 483 ~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 539 (543)
T PLN02971 483 ALGTAITTMMLARLLQGFKWKLAGSETRVELMESSH-DMFLSKPLVMVGELRLSEDLY 539 (543)
T ss_pred HHHHHHHHHHHHHHHHhCEEEeCCCCCCcchhhhcC-cccccccceeeeeecCCcccc
Confidence 99999999999999999999988653 455555555 554667999999999988887
No 3
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00 E-value=4e-43 Score=293.50 Aligned_cols=179 Identities=31% Similarity=0.693 Sum_probs=154.9
Q ss_pred CchhhHHHHHHHHHHhhhhcHHHHHHHHHHHHhhChHHHHHHHHHHhHhhCCC---------------------------
Q 047802 1 MTTLYTLPILQALILAATDTTAVTLTWIISPLLNHHDILNKARNELDIQVGTK--------------------------- 53 (185)
Q Consensus 1 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~--------------------------- 53 (185)
++++++...+.++++||+|||+++++|++|+|++||++|+||++|++++.+..
T Consensus 289 l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~ 368 (503)
T PLN02394 289 INEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMA 368 (503)
T ss_pred CCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCC
Confidence 57889999999999999999999999999999999999999999999987532
Q ss_pred ------CccccceeeeceeeCCCCEEEEchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCCccceeeccCCCCCCcch
Q 047802 54 ------RQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFELLPFSSGRRMCPGV 127 (185)
Q Consensus 54 ------r~~~~d~~i~~~~i~~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~fg~G~~~C~G~ 127 (185)
|.+.+|++++||.||+||.|.++.+.+|||+++|+||++|+|+||++.+...........|+|||.|+|.|+|+
T Consensus 369 ~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~ 448 (503)
T PLN02394 369 IPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGI 448 (503)
T ss_pred cccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccCccccCCCCCcccccCCCCceeCCCCCCCCCCCH
Confidence 67788999999999999999999999999999999999999999987542212222467899999999999999
Q ss_pred HHHHHHHHHHHHHhcccceeecCCCCC-CCCcccc-eeeeecCCCeEEEEEecC
Q 047802 128 SFALQVMQFTLASLPHGFDIATPSNEP-LDMGERL-GLTVEKSTPLEVLVSPRL 179 (185)
Q Consensus 128 ~la~~~~~~~~~~ll~~f~~~~~~~~~-~~~~~~~-~~~~~~~~~~~v~~~~R~ 179 (185)
++|++|++++++.|+++|++++.++.+ ++..... ++.+..+.++++++.+|+
T Consensus 449 ~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 502 (503)
T PLN02394 449 ILALPILGIVLGRLVQNFELLPPPGQSKIDVSEKGGQFSLHIAKHSTVVFKPRS 502 (503)
T ss_pred HHHHHHHHHHHHHHHHHceeEeCCCCCcCccccccCceeeccCCCceEEeecCC
Confidence 999999999999999999999877753 4443334 355656779999999996
No 4
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00 E-value=2.2e-43 Score=294.25 Aligned_cols=176 Identities=33% Similarity=0.611 Sum_probs=159.6
Q ss_pred CchhhHHHHHHHHHHhhhhcHHHHHHHHHHHHhhChHHHHHHHHHHhHhhCCC---------------------------
Q 047802 1 MTTLYTLPILQALILAATDTTAVTLTWIISPLLNHHDILNKARNELDIQVGTK--------------------------- 53 (185)
Q Consensus 1 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~--------------------------- 53 (185)
+++++|++++.++++||+|||+++++|++++|+.||++|+|+++|+.++.+..
T Consensus 287 l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyp 366 (497)
T KOG0157|consen 287 LTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRDDKWEVEKLDQMKYLEMVIKESLRLYP 366 (497)
T ss_pred CCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCCCChhhhhhhHHHHHHHHHHhccCC
Confidence 58999999999999999999999999999999999999999999999987622
Q ss_pred ------Cccccceeee-ceeeCCCCEEEEchhhhccCCCCCC-CCCCCCCCccccCCCCCCcCCCccceeeccCCCCCCc
Q 047802 54 ------RQSMEECTVS-GYNFPSGTQLFINVWKLQRDPHVWE-EPCKFQPERFLTRHKDTDVRGQNFELLPFSSGRRMCP 125 (185)
Q Consensus 54 ------r~~~~d~~i~-~~~i~~g~~v~~~~~~~~~d~~~~~-~p~~f~P~R~~~~~~~~~~~~~~~~~~~fg~G~~~C~ 125 (185)
|.+.+|++++ ||.||+|+.|.++++++|||+.+|+ ||++|||+||+++.... ..++++|+|||+|+|.|+
T Consensus 367 pvp~~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~~~~~~~--~~~~~~fipFsaGpR~Ci 444 (497)
T KOG0157|consen 367 PVPLVARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFLDGEEKA--KRHPFAFIPFSAGPRNCI 444 (497)
T ss_pred CCchhhcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccCCCCCcC--CCCCccccCCCCCcccch
Confidence 8999999995 8999999999999999999999996 99999999999764211 346799999999999999
Q ss_pred chHHHHHHHHHHHHHhcccceeecCCCCCCCCcccceeeeecCCCeEEEEEecCC
Q 047802 126 GVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVEKSTPLEVLVSPRLS 180 (185)
Q Consensus 126 G~~la~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~ 180 (185)
|+.||++|+|+++++|+++|+|++..+.. .......++++..+++|++++|.+
T Consensus 445 G~~fA~lemKv~l~~ll~~f~~~~~~~~~--~~~~~~~~l~~~~gl~v~~~~r~~ 497 (497)
T KOG0157|consen 445 GQKFAMLEMKVVLAHLLRRFRIEPVGGDK--PKPVPELTLRPKNGLKVKLRPRGS 497 (497)
T ss_pred hHHHHHHHHHHHHHHHHHheEEEecCCCC--ceeeeEEEEEecCCeEEEEEeCCC
Confidence 99999999999999999999999887643 455668889999999999999964
No 5
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.4e-43 Score=289.29 Aligned_cols=174 Identities=43% Similarity=0.811 Sum_probs=158.3
Q ss_pred CchhhHHHHHHHHHHhhhhcHHHHHHHHHHHHhhChHHHHHHHHHHhHhhCCC---------------------------
Q 047802 1 MTTLYTLPILQALILAATDTTAVTLTWIISPLLNHHDILNKARNELDIQVGTK--------------------------- 53 (185)
Q Consensus 1 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~--------------------------- 53 (185)
+++++|...++++++||+|||++++.|++.+|++||++|+|+++||+++.+..
T Consensus 282 ~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~ 361 (489)
T KOG0156|consen 282 LTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKGRLVSESDLPKLPYLKAVIKETLRLHPP 361 (489)
T ss_pred CCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCChhhhccCHHHHHHHHHHHhcCCC
Confidence 58899999999999999999999999999999999999999999999988754
Q ss_pred ------CccccceeeeceeeCCCCEEEEchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCCccceeeccCCCCCCcch
Q 047802 54 ------RQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFELLPFSSGRRMCPGV 127 (185)
Q Consensus 54 ------r~~~~d~~i~~~~i~~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~fg~G~~~C~G~ 127 (185)
|.+.+|+.|+||.||+||.|.++.|++||||++|+||++|+||||++.+ +.......++|||.|.|.|||.
T Consensus 362 ~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~~~---d~~~~~~~~iPFG~GRR~CpG~ 438 (489)
T KOG0156|consen 362 LPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLDSN---DGKGLDFKLIPFGSGRRICPGE 438 (489)
T ss_pred ccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcCCc---cccCCceEecCCCCCcCCCCcH
Confidence 8899999999999999999999999999999999999999999999874 2233788999999999999999
Q ss_pred HHHHHHHHHHHHHhcccceeecCCCCCCCCcccceeeeecCCCeEEEEEecC
Q 047802 128 SFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVEKSTPLEVLVSPRL 179 (185)
Q Consensus 128 ~la~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~ 179 (185)
.+|++++.++++.|+++|+|++.++ +++.... +....++.++.+...+|.
T Consensus 439 ~La~~~l~l~la~llq~F~w~~~~~-~~d~~e~-~~~~~~~~pl~~~~~~r~ 488 (489)
T KOG0156|consen 439 GLARAELFLFLANLLQRFDWKLPGG-KVDMEEA-GLTLKKKKPLKAVPVPRL 488 (489)
T ss_pred HHHHHHHHHHHHHHHheeeeecCCC-CCCCccc-ccceecCCcceeeeecCC
Confidence 9999999999999999999999987 5565555 366777888888887774
No 6
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00 E-value=1.7e-42 Score=289.49 Aligned_cols=176 Identities=22% Similarity=0.450 Sum_probs=151.1
Q ss_pred CchhhHHHHHHHHHHhhhhcHHHHHHHHHHHHhhChHHHHHHHHHHhHhhCCC--------------------------C
Q 047802 1 MTTLYTLPILQALILAATDTTAVTLTWIISPLLNHHDILNKARNELDIQVGTK--------------------------R 54 (185)
Q Consensus 1 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~--------------------------r 54 (185)
+++++|.+++.++++||+|||+++++|++++|+.||++|+|+++||+.+.... |
T Consensus 297 ~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v~~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r 376 (500)
T PLN02169 297 KKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTKFDNEDLEKLVYLHAALSESMRLYPPLPFNHK 376 (500)
T ss_pred CChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhCCHHHHhcCHHHHHHHHHHHhcCCCCCcCce
Confidence 35788999999999999999999999999999999999999999999875421 6
Q ss_pred ccccceee-eceeeCCCCEEEEchhhhccCCCCC-CCCCCCCCCccccCCCCCCcCCCccceeeccCCCCCCcchHHHHH
Q 047802 55 QSMEECTV-SGYNFPSGTQLFINVWKLQRDPHVW-EEPCKFQPERFLTRHKDTDVRGQNFELLPFSSGRRMCPGVSFALQ 132 (185)
Q Consensus 55 ~~~~d~~i-~~~~i~~g~~v~~~~~~~~~d~~~~-~~p~~f~P~R~~~~~~~~~~~~~~~~~~~fg~G~~~C~G~~la~~ 132 (185)
.+.+|.++ +|+.||+|+.|.+++|++||||++| +||++|+|+||++++... ....+..|+|||+|+|.|+|+++|++
T Consensus 377 ~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~~F~PeRfl~~~~~~-~~~~~~~~lPFG~GpR~CiG~~~A~~ 455 (500)
T PLN02169 377 APAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDALDFKPERWISDNGGL-RHEPSYKFMAFNSGPRTCLGKHLALL 455 (500)
T ss_pred ecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCChhhcCccccCCCCCCc-cCCCCccccCCCCCCCCCcCHHHHHH
Confidence 66666554 8999999999999999999999999 899999999999754211 11236789999999999999999999
Q ss_pred HHHHHHHHhcccceeecCCCCCCCCcccceeeeecCCCeEEEEEecC
Q 047802 133 VMQFTLASLPHGFDIATPSNEPLDMGERLGLTVEKSTPLEVLVSPRL 179 (185)
Q Consensus 133 ~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~ 179 (185)
|++++++.|+++|++++.++.++ .....+.+.+++++++++++|.
T Consensus 456 e~k~~la~ll~~f~~~~~~~~~~--~~~~~~~l~~~~gl~l~l~~~~ 500 (500)
T PLN02169 456 QMKIVALEIIKNYDFKVIEGHKI--EAIPSILLRMKHGLKVTVTKKI 500 (500)
T ss_pred HHHHHHHHHHHHCEEEEcCCCCc--ccccceEEecCCCEEEEEEeCC
Confidence 99999999999999998765443 2334567788999999999883
No 7
>PLN00168 Cytochrome P450; Provisional
Probab=100.00 E-value=2.8e-42 Score=289.46 Aligned_cols=179 Identities=28% Similarity=0.568 Sum_probs=154.9
Q ss_pred CchhhHHHHHHHHHHhhhhcHHHHHHHHHHHHhhChHHHHHHHHHHhHhhCCC---------------------------
Q 047802 1 MTTLYTLPILQALILAATDTTAVTLTWIISPLLNHHDILNKARNELDIQVGTK--------------------------- 53 (185)
Q Consensus 1 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~--------------------------- 53 (185)
+++++|..+++++++||+|||+++++|++++|++||++|+|+++||+.+.+..
T Consensus 302 lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p 381 (519)
T PLN00168 302 LTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHP 381 (519)
T ss_pred CCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCC
Confidence 57899999999999999999999999999999999999999999999887531
Q ss_pred -------CccccceeeeceeeCCCCEEEEchhhhccCCCCCCCCCCCCCCccccCCCCC--C-cCCCccceeeccCCCCC
Q 047802 54 -------RQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDT--D-VRGQNFELLPFSSGRRM 123 (185)
Q Consensus 54 -------r~~~~d~~i~~~~i~~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~--~-~~~~~~~~~~fg~G~~~ 123 (185)
|.+.+|++++||.||+|+.|.++.+++||||++|+||++|+|+||++..... . ....+..|+|||+|+|.
T Consensus 382 ~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~ 461 (519)
T PLN00168 382 PAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRI 461 (519)
T ss_pred CCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCC
Confidence 7888999999999999999999999999999999999999999999743111 0 11235689999999999
Q ss_pred CcchHHHHHHHHHHHHHhcccceeecCCCCCCCCcccceeeeecCCCeEEEEEecC
Q 047802 124 CPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVEKSTPLEVLVSPRL 179 (185)
Q Consensus 124 C~G~~la~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~ 179 (185)
|+|++||++|++++++.|+++|+|++.++.+.+.....++...++.++++++++|+
T Consensus 462 C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~ 517 (519)
T PLN00168 462 CAGLGIAMLHLEYFVANMVREFEWKEVPGDEVDFAEKREFTTVMAKPLRARLVPRR 517 (519)
T ss_pred CCcHHHHHHHHHHHHHHHHHHccceeCCCCcCChhhhceeEEeecCCcEEEEEecc
Confidence 99999999999999999999999998866444433333456667778999999986
No 8
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00 E-value=3.9e-42 Score=287.26 Aligned_cols=178 Identities=32% Similarity=0.685 Sum_probs=154.0
Q ss_pred CchhhHHHHHHHHHHhhhhcHHHHHHHHHHHHhhChHHHHHHHHHHhHhhCCC---------------------------
Q 047802 1 MTTLYTLPILQALILAATDTTAVTLTWIISPLLNHHDILNKARNELDIQVGTK--------------------------- 53 (185)
Q Consensus 1 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~--------------------------- 53 (185)
+++++|.++++++++||+|||+++++|++++|++||++|+|+++|++++.+..
T Consensus 284 ~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~ 363 (499)
T PLN03234 284 FTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPV 363 (499)
T ss_pred CCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCC
Confidence 57899999999999999999999999999999999999999999999876532
Q ss_pred ------CccccceeeeceeeCCCCEEEEchhhhccCCCCC-CCCCCCCCCccccCCCCCCcCCCccceeeccCCCCCCcc
Q 047802 54 ------RQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVW-EEPCKFQPERFLTRHKDTDVRGQNFELLPFSSGRRMCPG 126 (185)
Q Consensus 54 ------r~~~~d~~i~~~~i~~g~~v~~~~~~~~~d~~~~-~~p~~f~P~R~~~~~~~~~~~~~~~~~~~fg~G~~~C~G 126 (185)
|.+.+|++++|+.||+||.|.++.+.+||||++| +||++|+|+||+++.........+..|+|||+|+|.|+|
T Consensus 364 ~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G 443 (499)
T PLN03234 364 IPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPA 443 (499)
T ss_pred ccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCC
Confidence 7778899999999999999999999999999999 799999999999754221222356789999999999999
Q ss_pred hHHHHHHHHHHHHHhcccceeecCCCC-C--CCCcccceeeeecCCCeEEEEEec
Q 047802 127 VSFALQVMQFTLASLPHGFDIATPSNE-P--LDMGERLGLTVEKSTPLEVLVSPR 178 (185)
Q Consensus 127 ~~la~~~~~~~~~~ll~~f~~~~~~~~-~--~~~~~~~~~~~~~~~~~~v~~~~R 178 (185)
+++|++|++++++.|+++|++++.++. + +......++...+++.+.+..++|
T Consensus 444 ~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (499)
T PLN03234 444 MHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLAPTKH 498 (499)
T ss_pred hHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccccccccccCCCeEEEeecC
Confidence 999999999999999999999998763 2 233335566667788888777766
No 9
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00 E-value=5.9e-42 Score=286.50 Aligned_cols=184 Identities=39% Similarity=0.795 Sum_probs=159.0
Q ss_pred CchhhHHHHHHHHHHhhhhcHHHHHHHHHHHHhhChHHHHHHHHHHhHhhCCC---------------------------
Q 047802 1 MTTLYTLPILQALILAATDTTAVTLTWIISPLLNHHDILNKARNELDIQVGTK--------------------------- 53 (185)
Q Consensus 1 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~--------------------------- 53 (185)
++++++..+++.+++||+|||+++++|++++|++||++|+|+++|++.+.+..
T Consensus 285 l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~ 364 (504)
T PLN00110 285 LTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPS 364 (504)
T ss_pred CCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCC
Confidence 57889999999999999999999999999999999999999999999876531
Q ss_pred ------CccccceeeeceeeCCCCEEEEchhhhccCCCCCCCCCCCCCCccccCCCCCCc-CCCccceeeccCCCCCCcc
Q 047802 54 ------RQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDV-RGQNFELLPFSSGRRMCPG 126 (185)
Q Consensus 54 ------r~~~~d~~i~~~~i~~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~-~~~~~~~~~fg~G~~~C~G 126 (185)
|.+.+|++++||.||+|+.|.++.+.+|||+++|+||++|+|+||++....... ......|+|||+|+|.|+|
T Consensus 365 ~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G 444 (504)
T PLN00110 365 TPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAG 444 (504)
T ss_pred cccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCc
Confidence 788899999999999999999999999999999999999999999965321111 1124579999999999999
Q ss_pred hHHHHHHHHHHHHHhcccceeecCCCCCCCCcccceeeeecCCCeEEEEEecCCCCCC
Q 047802 127 VSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVEKSTPLEVLVSPRLSASLY 184 (185)
Q Consensus 127 ~~la~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~~~~~ 184 (185)
++||++|++++++.|+++|++++.++++.......+....+..++++++++|..-+-|
T Consensus 445 ~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 502 (504)
T PLN00110 445 TRMGIVLVEYILGTLVHSFDWKLPDGVELNMDEAFGLALQKAVPLSAMVTPRLHQSAY 502 (504)
T ss_pred HHHHHHHHHHHHHHHHHhceeecCCCCccCcccccccccccCCCceEeeccCCCchhc
Confidence 9999999999999999999999987654333334566777889999999999766655
No 10
>PLN02183 ferulate 5-hydroxylase
Probab=100.00 E-value=1.1e-41 Score=285.79 Aligned_cols=177 Identities=33% Similarity=0.660 Sum_probs=152.3
Q ss_pred CchhhHHHHHHHHHHhhhhcHHHHHHHHHHHHhhChHHHHHHHHHHhHhhCCC---------------------------
Q 047802 1 MTTLYTLPILQALILAATDTTAVTLTWIISPLLNHHDILNKARNELDIQVGTK--------------------------- 53 (185)
Q Consensus 1 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~--------------------------- 53 (185)
+++++++.+++++++||+|||+.+++|++++|++||++|+|+++|++++.+..
T Consensus 300 l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~ 379 (516)
T PLN02183 300 LTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPP 379 (516)
T ss_pred CCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCC
Confidence 47889999999999999999999999999999999999999999999887521
Q ss_pred -----CccccceeeeceeeCCCCEEEEchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCCccceeeccCCCCCCcchH
Q 047802 54 -----RQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFELLPFSSGRRMCPGVS 128 (185)
Q Consensus 54 -----r~~~~d~~i~~~~i~~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~fg~G~~~C~G~~ 128 (185)
|.+.+|++++||.|||||.|.++.+++|||+++|+||++|+|+||++++.. .....+..|+|||.|+|.|+|++
T Consensus 380 ~p~~~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~~F~PeRfl~~~~~-~~~~~~~~~lpFG~G~R~CiG~~ 458 (516)
T PLN02183 380 IPLLLHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDPDTFKPSRFLKPGVP-DFKGSHFEFIPFGSGRRSCPGMQ 458 (516)
T ss_pred ccceeeeccCceeECCEEECCCCEEEEehhhhcCCccccCCccccCchhhCCCCCc-cccCCcceecCCCCCCCCCCChH
Confidence 788899999999999999999999999999999999999999999965421 11224568999999999999999
Q ss_pred HHHHHHHHHHHHhcccceeecCCCCC---CCCcccceeeeecCCCeEEEEEec
Q 047802 129 FALQVMQFTLASLPHGFDIATPSNEP---LDMGERLGLTVEKSTPLEVLVSPR 178 (185)
Q Consensus 129 la~~~~~~~~~~ll~~f~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~R 178 (185)
+|++|++++++.|+++|++++.++.. .......+...++..++.+.+++|
T Consensus 459 lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 511 (516)
T PLN02183 459 LGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFGLTAPRATRLVAVPTYR 511 (516)
T ss_pred HHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhccccccccCCCcEEEeecC
Confidence 99999999999999999999887642 222223344445667888888888
No 11
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00 E-value=1.5e-41 Score=284.65 Aligned_cols=185 Identities=36% Similarity=0.709 Sum_probs=159.6
Q ss_pred CchhhHHHHHHHHHHhhhhcHHHHHHHHHHHHhhChHHHHHHHHHHhHhhCCC---------------------------
Q 047802 1 MTTLYTLPILQALILAATDTTAVTLTWIISPLLNHHDILNKARNELDIQVGTK--------------------------- 53 (185)
Q Consensus 1 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~--------------------------- 53 (185)
+++++|.++++.+++||+|||+++++|++++|++||++|+|+++|++++.+..
T Consensus 292 l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~ 371 (514)
T PLN03112 292 MDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPA 371 (514)
T ss_pred CCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCC
Confidence 47889999999999999999999999999999999999999999999876531
Q ss_pred ------CccccceeeeceeeCCCCEEEEchhhhccCCCCCCCCCCCCCCccccCCCC-CCc-CCCccceeeccCCCCCCc
Q 047802 54 ------RQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKD-TDV-RGQNFELLPFSSGRRMCP 125 (185)
Q Consensus 54 ------r~~~~d~~i~~~~i~~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~-~~~-~~~~~~~~~fg~G~~~C~ 125 (185)
|.+.+|++++|+.||+|+.|.++.+.+||||++|+||++|+|+||+..... ... ...+..|+|||.|+|.|+
T Consensus 372 ~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~ 451 (514)
T PLN03112 372 GPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCP 451 (514)
T ss_pred cccccccccCCCeeEcCEEeCCCCEEEEehHHhhCCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCC
Confidence 788899999999999999999999999999999999999999998754211 111 123568999999999999
Q ss_pred chHHHHHHHHHHHHHhcccceeecCCCC---CCCCcccceeeeecCCCeEEEEEecCCCCCCC
Q 047802 126 GVSFALQVMQFTLASLPHGFDIATPSNE---PLDMGERLGLTVEKSTPLEVLVSPRLSASLYG 185 (185)
Q Consensus 126 G~~la~~~~~~~~~~ll~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~R~~~~~~~ 185 (185)
|+++|++|++++++.|+++|++++.++. +.......++..++.+++++++.+|..-.+||
T Consensus 452 G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 514 (514)
T PLN03112 452 GAPLGVTMVLMALARLFHCFDWSPPDGLRPEDIDTQEVYGMTMPKAKPLRAVATPRLAPHLYG 514 (514)
T ss_pred cHHHHHHHHHHHHHHHHHheeeecCCCCCcccCCCccccCcccccCCCeEEEeecCCcccccC
Confidence 9999999999999999999999987653 23333334566677889999999999998887
No 12
>PTZ00404 cytochrome P450; Provisional
Probab=100.00 E-value=1.1e-41 Score=283.40 Aligned_cols=166 Identities=30% Similarity=0.548 Sum_probs=146.9
Q ss_pred hHHHHHHHHHHhhhhcHHHHHHHHHHHHhhChHHHHHHHHHHhHhhCCC-------------------------------
Q 047802 5 YTLPILQALILAATDTTAVTLTWIISPLLNHHDILNKARNELDIQVGTK------------------------------- 53 (185)
Q Consensus 5 ~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~------------------------------- 53 (185)
+|++++..+++||+|||+.+++|++++|++||++|+|+++|++++.+..
T Consensus 283 ~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~ 362 (482)
T PTZ00404 283 SILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFG 362 (482)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcCCCCCCccccccChHHHHHHHHHHHhcCCcccc
Confidence 3788999999999999999999999999999999999999999987531
Q ss_pred --Cccccceee-eceeeCCCCEEEEchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCCccceeeccCCCCCCcchHHH
Q 047802 54 --RQSMEECTV-SGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFELLPFSSGRRMCPGVSFA 130 (185)
Q Consensus 54 --r~~~~d~~i-~~~~i~~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~fg~G~~~C~G~~la 130 (185)
|.+.+|+++ +|+.||+|+.|.++.+++||||++|+||++|+|+||++.. .+..|+|||+|+|.|+|+++|
T Consensus 363 ~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl~~~-------~~~~~~pFg~G~R~C~G~~~A 435 (482)
T PTZ00404 363 LPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFLNPD-------SNDAFMPFSIGPRNCVGQQFA 435 (482)
T ss_pred cceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCccccCCCC-------CCCceeccCCCCCCCccHHHH
Confidence 888899999 9999999999999999999999999999999999998642 456899999999999999999
Q ss_pred HHHHHHHHHHhcccceeecCCCCCCCCcccceeeeecCCCeEEEEEec
Q 047802 131 LQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVEKSTPLEVLVSPR 178 (185)
Q Consensus 131 ~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R 178 (185)
++|++++++.|+++|+++..+++++......+.... +.++++.+++|
T Consensus 436 ~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~R 482 (482)
T PTZ00404 436 QDELYLAFSNIILNFKLKSIDGKKIDETEEYGLTLK-PNKFKVLLEKR 482 (482)
T ss_pred HHHHHHHHHHHHHhcEEecCCCCCCCcccccceeec-CCCceeeeecC
Confidence 999999999999999999877654433333344445 56899999887
No 13
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00 E-value=1.9e-41 Score=288.88 Aligned_cols=180 Identities=29% Similarity=0.534 Sum_probs=155.6
Q ss_pred CchhhHHHHHHHHHHhhhhcHHHHHHHHHHHHhhChHHHHHHHHHHhHhhCCC---------------------------
Q 047802 1 MTTLYTLPILQALILAATDTTAVTLTWIISPLLNHHDILNKARNELDIQVGTK--------------------------- 53 (185)
Q Consensus 1 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~--------------------------- 53 (185)
+++++|.++++.+++||+|||+.+|+|++++|++||++|+||++|++.+.+..
T Consensus 387 ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~~~~t~edL~kLPYL~AVIkEtLRL~p~~ 466 (633)
T PLN02738 387 VSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGDRFPTIEDMKKLKYTTRVINESLRLYPQP 466 (633)
T ss_pred CCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCCCCCCHHHHccCHHHHHHHHHHHhcCCCc
Confidence 47899999999999999999999999999999999999999999999876532
Q ss_pred ----CccccceeeeceeeCCCCEEEEchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCCccceeeccCCCCCCcchHH
Q 047802 54 ----RQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFELLPFSSGRRMCPGVSF 129 (185)
Q Consensus 54 ----r~~~~d~~i~~~~i~~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~fg~G~~~C~G~~l 129 (185)
|++.+|.+++||.||+||.|.++.+.+||||++|+||++|+|+||+.+.........+..|+|||.|+|.|+|++|
T Consensus 467 p~~~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R~CiG~~l 546 (633)
T PLN02738 467 PVLIRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMF 546 (633)
T ss_pred cccceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCCCCceeCCCCCCCCCcCHHH
Confidence 7788999999999999999999999999999999999999999998542111122356789999999999999999
Q ss_pred HHHHHHHHHHHhcccceeecCCCCCCCCcccceeeeecCCCeEEEEEecCCC
Q 047802 130 ALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVEKSTPLEVLVSPRLSA 181 (185)
Q Consensus 130 a~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~~ 181 (185)
|++|++++++.|+++|+|++..+.+ +.....+..+.+..++++++++|...
T Consensus 547 A~~El~l~LA~Llr~F~~el~~~~~-~~~~~~~~~~~p~~~l~v~l~~R~~~ 597 (633)
T PLN02738 547 ASFENVVATAMLVRRFDFQLAPGAP-PVKMTTGATIHTTEGLKMTVTRRTKP 597 (633)
T ss_pred HHHHHHHHHHHHHHhCeeEeCCCCC-CcccccceEEeeCCCcEEEEEECCCC
Confidence 9999999999999999999886642 22333356677789999999999643
No 14
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00 E-value=1.2e-41 Score=278.07 Aligned_cols=173 Identities=32% Similarity=0.566 Sum_probs=147.8
Q ss_pred CchhhHHHHHHHHHHhhhhcHHHHHHHHHHHHhhChHHHHHHHHHHhHhhCCC---------------------------
Q 047802 1 MTTLYTLPILQALILAATDTTAVTLTWIISPLLNHHDILNKARNELDIQVGTK--------------------------- 53 (185)
Q Consensus 1 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~--------------------------- 53 (185)
+++++++.+++.+++||++||+.+++|++++|++||++|+++++|++++.+..
T Consensus 258 ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~ 337 (463)
T PF00067_consen 258 LSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDGREITFEDLSKLPYLDAVIKETLRLYPP 337 (463)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTSSSHHHHHHGTGHHHHHHHHHHHHHSTS
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 57899999999999999999999999999999999999999999999887542
Q ss_pred ------CccccceeeeceeeCCCCEEEEchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCCccceeeccCCCCCCcch
Q 047802 54 ------RQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFELLPFSSGRRMCPGV 127 (185)
Q Consensus 54 ------r~~~~d~~i~~~~i~~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~fg~G~~~C~G~ 127 (185)
|.+.+|++++|+.||+|+.|.++.+.+|+|+++|+||++|+|+||++.+. ........|+|||.|+|.|+|+
T Consensus 338 ~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~--~~~~~~~~~~~Fg~G~r~C~G~ 415 (463)
T PF00067_consen 338 VPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDERG--ISNRPSFAFLPFGAGPRMCPGR 415 (463)
T ss_dssp SSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTTTS--TBCSSSTTSSTTESSTTS-TTH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccchHH
Confidence 88999999999999999999999999999999999999999999998763 2234788899999999999999
Q ss_pred HHHHHHHHHHHHHhcccceeecCCCCCCCCcccceeeeecCCCeEEEE
Q 047802 128 SFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVEKSTPLEVLV 175 (185)
Q Consensus 128 ~la~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 175 (185)
++|++|++++++.|+++|++++.++............+.++.+++|.+
T Consensus 416 ~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (463)
T PF00067_consen 416 NLAMMEMKVFLAKLLRRFDFELVPGSEPEPQEQQNGFLLPPKPLKVKF 463 (463)
T ss_dssp HHHHHHHHHHHHHHHHHEEEEESTTSSGGEEECSCSSSEEESSSEEEE
T ss_pred HHHHHHHHHHHHHHHHhCEEEECCCCCCCCccccCceEeeCCCcEEeC
Confidence 999999999999999999999977644333333223444556666654
No 15
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00 E-value=3.4e-41 Score=282.66 Aligned_cols=173 Identities=24% Similarity=0.442 Sum_probs=152.6
Q ss_pred CchhhHHHHHHHHHHhhhhcHHHHHHHHHHHHhhChHHHHHHHHHHhHhhCCC---------------------------
Q 047802 1 MTTLYTLPILQALILAATDTTAVTLTWIISPLLNHHDILNKARNELDIQVGTK--------------------------- 53 (185)
Q Consensus 1 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~--------------------------- 53 (185)
++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++.+.+..
T Consensus 312 l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~l~~lpYl~avi~EtlRl~p~~ 391 (516)
T PLN02290 312 LNLQLIMDECKTFFFAGHETTALLLTWTLMLLASNPTWQDKVRAEVAEVCGGETPSVDHLSKLTLLNMVINESLRLYPPA 391 (516)
T ss_pred CCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCCHHHHhcChHHHHHHHHHHHcCCCc
Confidence 46778999999999999999999999999999999999999999999886532
Q ss_pred ----CccccceeeeceeeCCCCEEEEchhhhccCCCCC-CCCCCCCCCccccCCCCCCcCCCccceeeccCCCCCCcchH
Q 047802 54 ----RQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVW-EEPCKFQPERFLTRHKDTDVRGQNFELLPFSSGRRMCPGVS 128 (185)
Q Consensus 54 ----r~~~~d~~i~~~~i~~g~~v~~~~~~~~~d~~~~-~~p~~f~P~R~~~~~~~~~~~~~~~~~~~fg~G~~~C~G~~ 128 (185)
|.+.+|++++|+.||+||.|.++.+++||||++| +||++|+|+||++.. ...+..|+|||.|+|.|+|++
T Consensus 392 ~~~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~-----~~~~~~~~pFG~G~R~C~G~~ 466 (516)
T PLN02290 392 TLLPRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSEELWGKDANEFNPDRFAGRP-----FAPGRHFIPFAAGPRNCIGQA 466 (516)
T ss_pred cccceeecCCeeECCEEECCCCEEEecHHHhcCChhhhCCChhhcCccccCCCC-----CCCCCeEecCCCCCCCCccHH
Confidence 8888999999999999999999999999999999 799999999999532 113457999999999999999
Q ss_pred HHHHHHHHHHHHhcccceeecCCCCCCCCcccceeeeecCCCeEEEEEecCC
Q 047802 129 FALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVEKSTPLEVLVSPRLS 180 (185)
Q Consensus 129 la~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~ 180 (185)
+|++|++++++.|+++|++++.++.. ..........|..++++++++|++
T Consensus 467 lA~~el~l~la~ll~~f~~~~~~~~~--~~~~~~~~~~p~~~~~~~~~~~~~ 516 (516)
T PLN02290 467 FAMMEAKIILAMLISKFSFTISDNYR--HAPVVVLTIKPKYGVQVCLKPLNP 516 (516)
T ss_pred HHHHHHHHHHHHHHHhceEeeCCCcc--cCccceeeecCCCCCeEEEEeCCC
Confidence 99999999999999999999876532 122235677889999999999975
No 16
>PLN02500 cytochrome P450 90B1
Probab=100.00 E-value=3.2e-41 Score=281.28 Aligned_cols=173 Identities=20% Similarity=0.350 Sum_probs=147.1
Q ss_pred CchhhHHHHHHHHHHhhhhcHHHHHHHHHHHHhhChHHHHHHHHHHhHhhC------CC---------------------
Q 047802 1 MTTLYTLPILQALILAATDTTAVTLTWIISPLLNHHDILNKARNELDIQVG------TK--------------------- 53 (185)
Q Consensus 1 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~------~~--------------------- 53 (185)
++++++++++.++++||+|||+++++|++++|++||++|+|+++|++++.+ ..
T Consensus 275 ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtl 354 (490)
T PLN02500 275 LSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETL 354 (490)
T ss_pred CCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHH
Confidence 589999999999999999999999999999999999999999999987642 10
Q ss_pred ----------CccccceeeeceeeCCCCEEEEchhhhccCCCCCCCCCCCCCCccccCCCCCCc----CCCccceeeccC
Q 047802 54 ----------RQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDV----RGQNFELLPFSS 119 (185)
Q Consensus 54 ----------r~~~~d~~i~~~~i~~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~----~~~~~~~~~fg~ 119 (185)
|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|+||++++..... ...+..|+|||.
T Consensus 355 Rl~P~~~~~~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~ 434 (490)
T PLN02500 355 RLGNVVRFLHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGG 434 (490)
T ss_pred hcCCCccCeeeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccChhhccCCCcccccccccCCCCCCCcCCCC
Confidence 888999999999999999999999999999999999999999999975421110 124678999999
Q ss_pred CCCCCcchHHHHHHHHHHHHHhcccceeecCCCCCCCCcccceeeeecCCCeEEEEEe
Q 047802 120 GRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVEKSTPLEVLVSP 177 (185)
Q Consensus 120 G~~~C~G~~la~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 177 (185)
|+|.|+|+++|++|++++++.|+++|+|++.+++.. .. . .. ..+..+++|++++
T Consensus 435 G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~~-~~-~-~~-~~~~~~l~~~~~~ 488 (490)
T PLN02500 435 GPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQA-FA-F-PF-VDFPKGLPIRVRR 488 (490)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCcc-ee-c-cc-ccCCCCceEEEEe
Confidence 999999999999999999999999999998765431 11 1 12 2334688888765
No 17
>PLN02655 ent-kaurene oxidase
Probab=100.00 E-value=5.9e-41 Score=278.15 Aligned_cols=176 Identities=28% Similarity=0.514 Sum_probs=155.4
Q ss_pred CchhhHHHHHHHHHHhhhhcHHHHHHHHHHHHhhChHHHHHHHHHHhHhhCCC---------------------------
Q 047802 1 MTTLYTLPILQALILAATDTTAVTLTWIISPLLNHHDILNKARNELDIQVGTK--------------------------- 53 (185)
Q Consensus 1 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~--------------------------- 53 (185)
|+++++.++++++++||+|||+++++|++++|++||++|+|+++|++.+.+..
T Consensus 258 ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~ 337 (466)
T PLN02655 258 LTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGDERVTEEDLPNLPYLNAVFHETLRKYSPV 337 (466)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCHHHHhcChHHHHHHHHHhccCCCc
Confidence 58999999999999999999999999999999999999999999999876542
Q ss_pred -----CccccceeeeceeeCCCCEEEEchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCCccceeeccCCCCCCcchH
Q 047802 54 -----RQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFELLPFSSGRRMCPGVS 128 (185)
Q Consensus 54 -----r~~~~d~~i~~~~i~~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~fg~G~~~C~G~~ 128 (185)
|.+.+|++++|+.||+|+.|.++.+++|||+++|+||++|+|+||++.+.. ......++|||+|+|.|+|++
T Consensus 338 ~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~~~~~---~~~~~~~~~Fg~G~r~C~G~~ 414 (466)
T PLN02655 338 PLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGEKYE---SADMYKTMAFGAGKRVCAGSL 414 (466)
T ss_pred CCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCCCCcc---cCCcccccCCCCCCCCCCcHH
Confidence 788899999999999999999999999999999999999999999975421 123478999999999999999
Q ss_pred HHHHHHHHHHHHhcccceeecCCCCCCCCcccceeeeecCCCeEEEEEecCC
Q 047802 129 FALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVEKSTPLEVLVSPRLS 180 (185)
Q Consensus 129 la~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~ 180 (185)
||..+++++++.|+++|++++.++.. +.....++...++.++.+++.+|.+
T Consensus 415 ~A~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~~ 465 (466)
T PLN02655 415 QAMLIACMAIARLVQEFEWRLREGDE-EKEDTVQLTTQKLHPLHAHLKPRGS 465 (466)
T ss_pred HHHHHHHHHHHHHHHHeEEEeCCCCc-cccchhheeEeecCCcEEEEeecCC
Confidence 99999999999999999999876632 2233446667788999999999864
No 18
>PLN03018 homomethionine N-hydroxylase
Probab=100.00 E-value=1.5e-40 Score=279.54 Aligned_cols=183 Identities=30% Similarity=0.526 Sum_probs=154.4
Q ss_pred CchhhHHHHHHHHHHhhhhcHHHHHHHHHHHHhhChHHHHHHHHHHhHhhCCC---------------------------
Q 047802 1 MTTLYTLPILQALILAATDTTAVTLTWIISPLLNHHDILNKARNELDIQVGTK--------------------------- 53 (185)
Q Consensus 1 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~--------------------------- 53 (185)
+++++|+.++..+++||+|||+.+++|++++|+.||++|+|+++||+.+.+..
T Consensus 310 ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~ 389 (534)
T PLN03018 310 VTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPS 389 (534)
T ss_pred CCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCC
Confidence 57899999999999999999999999999999999999999999999876531
Q ss_pred ------CccccceeeeceeeCCCCEEEEchhhhccCCCCCCCCCCCCCCccccCCCCCC---cCCCccceeeccCCCCCC
Q 047802 54 ------RQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTD---VRGQNFELLPFSSGRRMC 124 (185)
Q Consensus 54 ------r~~~~d~~i~~~~i~~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~---~~~~~~~~~~fg~G~~~C 124 (185)
|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|+||++.+.... ....+..|+|||+|+|.|
T Consensus 390 ~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C 469 (534)
T PLN03018 390 AHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGC 469 (534)
T ss_pred ccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcccCCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCC
Confidence 77889999999999999999999999999999999999999999996542110 012456899999999999
Q ss_pred cchHHHHHHHHHHHHHhcccceeecCCCC-CCCCcccceeeeecCCCeEEEEEecCCCCCC
Q 047802 125 PGVSFALQVMQFTLASLPHGFDIATPSNE-PLDMGERLGLTVEKSTPLEVLVSPRLSASLY 184 (185)
Q Consensus 125 ~G~~la~~~~~~~~~~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~R~~~~~~ 184 (185)
+|+++|++|+++++++|+++|++++.++. +++.....+... .+.+++|++.+|...++|
T Consensus 470 ~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~-~p~~~~v~~~~R~~~~~~ 529 (534)
T PLN03018 470 VGVKVGTIMMVMMLARFLQGFNWKLHQDFGPLSLEEDDASLL-MAKPLLLSVEPRLAPNLY 529 (534)
T ss_pred ccHHHHHHHHHHHHHHHHHhceEEeCCCCCCCCcccccccee-cCCCeEEEEEeccccccc
Confidence 99999999999999999999999987653 333322334333 457999999999544443
No 19
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00 E-value=8.3e-41 Score=280.43 Aligned_cols=185 Identities=43% Similarity=0.839 Sum_probs=157.0
Q ss_pred CchhhHHHHHHHHHHhhhhcHHHHHHHHHHHHhhChHHHHHHHHHHhHhhCCC---------------------------
Q 047802 1 MTTLYTLPILQALILAATDTTAVTLTWIISPLLNHHDILNKARNELDIQVGTK--------------------------- 53 (185)
Q Consensus 1 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~--------------------------- 53 (185)
++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++.+.+..
T Consensus 293 l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~ 372 (517)
T PLN02687 293 ITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPS 372 (517)
T ss_pred CCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhhhCHHHHHHHHHHHccCCC
Confidence 57889999999999999999999999999999999999999999999876531
Q ss_pred ------CccccceeeeceeeCCCCEEEEchhhhccCCCCCCCCCCCCCCccccCCCCC--CcCCCccceeeccCCCCCCc
Q 047802 54 ------RQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDT--DVRGQNFELLPFSSGRRMCP 125 (185)
Q Consensus 54 ------r~~~~d~~i~~~~i~~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~--~~~~~~~~~~~fg~G~~~C~ 125 (185)
|.+.+|++++|+.||+|+.|.++.+.+|||+++|+||++|+|+||++.+... .....+..|+|||+|+|.|+
T Consensus 373 ~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~ 452 (517)
T PLN02687 373 TPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICA 452 (517)
T ss_pred ccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCC
Confidence 8888999999999999999999999999999999999999999999753211 11224568999999999999
Q ss_pred chHHHHHHHHHHHHHhcccceeecCCCCC---CCCcccceeeeecCCCeEEEEEecCCCCCCC
Q 047802 126 GVSFALQVMQFTLASLPHGFDIATPSNEP---LDMGERLGLTVEKSTPLEVLVSPRLSASLYG 185 (185)
Q Consensus 126 G~~la~~~~~~~~~~ll~~f~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~R~~~~~~~ 185 (185)
|++||++|++++++.|+++|++++.++.. ++..........+..++++++++|.=.+-||
T Consensus 453 G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~ 515 (517)
T PLN02687 453 GLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLMVHPRPRLLPSAYG 515 (517)
T ss_pred ChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcccccceeeecCCCeEEeeccCCChhhcc
Confidence 99999999999999999999999886632 2222334555666779999999996235565
No 20
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00 E-value=1e-40 Score=278.73 Aligned_cols=176 Identities=26% Similarity=0.365 Sum_probs=151.5
Q ss_pred chhhHHHHHHHHHHhhhhcHHHHHHHHHHHHhhChHHHHHHHHHHhHhhCCC----------------------------
Q 047802 2 TTLYTLPILQALILAATDTTAVTLTWIISPLLNHHDILNKARNELDIQVGTK---------------------------- 53 (185)
Q Consensus 2 ~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~---------------------------- 53 (185)
+++++.++++++++||+|||+++++|++|+|++||++|+|+++|++.+.+..
T Consensus 290 ~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~~~l~~LpYl~avi~EtLRl~p~ 369 (502)
T PLN02426 290 DDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFEEMKEMHYLHAALYESMRLFPP 369 (502)
T ss_pred CHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCHHHHhcChHHHHHHHHHHhCCCC
Confidence 5788999999999999999999999999999999999999999999876521
Q ss_pred -----Cccccceee-eceeeCCCCEEEEchhhhccCCCCC-CCCCCCCCCccccCCCCCCcCCCccceeeccCCCCCCcc
Q 047802 54 -----RQSMEECTV-SGYNFPSGTQLFINVWKLQRDPHVW-EEPCKFQPERFLTRHKDTDVRGQNFELLPFSSGRRMCPG 126 (185)
Q Consensus 54 -----r~~~~d~~i-~~~~i~~g~~v~~~~~~~~~d~~~~-~~p~~f~P~R~~~~~~~~~~~~~~~~~~~fg~G~~~C~G 126 (185)
|.+.+|.++ +|+.||+||.|.++.+++|||+++| +||++|+|+||++++. .....+..|+|||+|+|.|+|
T Consensus 370 v~~~~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~--~~~~~~~~~~pFg~G~R~CiG 447 (502)
T PLN02426 370 VQFDSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGV--FVPENPFKYPVFQAGLRVCLG 447 (502)
T ss_pred CCCcceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCC--cCCCCCcccCCCCCCCCCCcc
Confidence 677778777 8999999999999999999999999 9999999999997421 112245689999999999999
Q ss_pred hHHHHHHHHHHHHHhcccceeecCCCCCCCCcccceeeeecCCCeEEEEEecC
Q 047802 127 VSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVEKSTPLEVLVSPRL 179 (185)
Q Consensus 127 ~~la~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~ 179 (185)
+++|++|++++++.|+++|++++.+++........+..+.++.+++|++++|.
T Consensus 448 ~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~r~ 500 (502)
T PLN02426 448 KEMALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPGLTATVRGGLPVRVRERV 500 (502)
T ss_pred HHHHHHHHHHHHHHHHHHceEEEecCCCCCCcccceeEEecCCCEEEEEEEcc
Confidence 99999999999999999999998654322223334677888999999999985
No 21
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00 E-value=1.1e-40 Score=279.65 Aligned_cols=175 Identities=23% Similarity=0.360 Sum_probs=148.9
Q ss_pred CchhhHHHHHHHHHHhhhhcHHHHHHHHHHHHhhChHHHHHHHHHHhHhhC----------------------CC-----
Q 047802 1 MTTLYTLPILQALILAATDTTAVTLTWIISPLLNHHDILNKARNELDIQVG----------------------TK----- 53 (185)
Q Consensus 1 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~----------------------~~----- 53 (185)
+++++++++++++++||+|||+++++|++|+|++||++|+|+++|++.+.. ..
T Consensus 288 l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (516)
T PLN03195 288 FTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDS 367 (516)
T ss_pred CCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcccccccccccchhhhhcccccCCCCHHH
Confidence 578999999999999999999999999999999999999999999987542 00
Q ss_pred -------------------------Cccccceee-eceeeCCCCEEEEchhhhccCCCCC-CCCCCCCCCccccCCCCCC
Q 047802 54 -------------------------RQSMEECTV-SGYNFPSGTQLFINVWKLQRDPHVW-EEPCKFQPERFLTRHKDTD 106 (185)
Q Consensus 54 -------------------------r~~~~d~~i-~~~~i~~g~~v~~~~~~~~~d~~~~-~~p~~f~P~R~~~~~~~~~ 106 (185)
|.+.+|..+ +|+.||||+.|.++.+++||||++| +||++|+|+||++.+. .
T Consensus 368 l~~Lpyl~Avi~EtLRl~p~~p~~~r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~--~ 445 (516)
T PLN03195 368 LGKLQYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWIKDGV--F 445 (516)
T ss_pred HhcCHHHHHHHHHHhhcCCCCcchhhhhccCcCcCCCcEECCCCEEEEehHhhccChhhhccChhhcCCcccCCCCC--c
Confidence 556666665 8999999999999999999999999 9999999999996431 1
Q ss_pred cCCCccceeeccCCCCCCcchHHHHHHHHHHHHHhcccceeecCCCCCCCCcccceeeeecCCCeEEEEEecC
Q 047802 107 VRGQNFELLPFSSGRRMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVEKSTPLEVLVSPRL 179 (185)
Q Consensus 107 ~~~~~~~~~~fg~G~~~C~G~~la~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~ 179 (185)
....+..|+|||+|+|.|+|++||++|++++++.|+++|++++.++.+.. ......+.+..+++|++++|+
T Consensus 446 ~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~~r~ 516 (516)
T PLN03195 446 QNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGHPVK--YRMMTILSMANGLKVTVSRRS 516 (516)
T ss_pred CCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCCcce--eeeeeEEecCCCEEEEEEeCC
Confidence 12245679999999999999999999999999999999999987654332 223345678899999999984
No 22
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00 E-value=1.5e-40 Score=274.75 Aligned_cols=170 Identities=20% Similarity=0.305 Sum_probs=150.9
Q ss_pred CchhhHHHHHHHHHHhhhhcHHHHHHHHHHHHhhChHHHHHHHHHHhHhhC------CC---------------------
Q 047802 1 MTTLYTLPILQALILAATDTTAVTLTWIISPLLNHHDILNKARNELDIQVG------TK--------------------- 53 (185)
Q Consensus 1 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~------~~--------------------- 53 (185)
+++++|+.+++++++||+|||+.+++|++++|++||++|+++++|++++.. ..
T Consensus 247 l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lR 326 (452)
T PLN03141 247 LTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTGEPLYWTDYMSLPFTQNVITETLR 326 (452)
T ss_pred CCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHh
Confidence 578999999999999999999999999999999999999999999976531 00
Q ss_pred ---------CccccceeeeceeeCCCCEEEEchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCCccceeeccCCCCCC
Q 047802 54 ---------RQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFELLPFSSGRRMC 124 (185)
Q Consensus 54 ---------r~~~~d~~i~~~~i~~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~fg~G~~~C 124 (185)
|.+.+|++++||.||+|+.|.++.+.+|||+++|+||++|+|+||++.+ ..+..|+|||+|+|.|
T Consensus 327 l~p~~~~~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~PeRfl~~~------~~~~~~~pFG~G~R~C 400 (452)
T PLN03141 327 MGNIINGVMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWRWQEKD------MNNSSFTPFGGGQRLC 400 (452)
T ss_pred ccCCcCCcceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccCcccccCCC------CCCCCCCCCCCCCCCC
Confidence 8889999999999999999999999999999999999999999999653 1356899999999999
Q ss_pred cchHHHHHHHHHHHHHhcccceeecCCCCCCCCcccceeeeecCCCeEEEEEecCCC
Q 047802 125 PGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVEKSTPLEVLVSPRLSA 181 (185)
Q Consensus 125 ~G~~la~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~~ 181 (185)
+|++||++|++++++.|+++|++++.++... ....+.|..++.|++++|.++
T Consensus 401 ~G~~lA~~el~~~la~ll~~f~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 452 (452)
T PLN03141 401 PGLDLARLEASIFLHHLVTRFRWVAEEDTIV-----NFPTVRMKRKLPIWVTRIDDS 452 (452)
T ss_pred ChHHHHHHHHHHHHHHHHhcCeeecCCCCee-----ecccccCCCCceEEEEeCCCC
Confidence 9999999999999999999999998765321 123668889999999999753
No 23
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.2e-40 Score=269.69 Aligned_cols=175 Identities=27% Similarity=0.446 Sum_probs=160.2
Q ss_pred CchhhHHHHHHHHHHhhhhcHHHHHHHHHHHHhhChHHHHHHHHHHhHhhCCC---------------------------
Q 047802 1 MTTLYTLPILQALILAATDTTAVTLTWIISPLLNHHDILNKARNELDIQVGTK--------------------------- 53 (185)
Q Consensus 1 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~--------------------------- 53 (185)
++.+++..++++++.||.|||+.++.|+||+|++||++|++|++|+.++....
T Consensus 312 l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyP 391 (519)
T KOG0159|consen 312 LSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYP 391 (519)
T ss_pred CCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceec
Confidence 46788999999999999999999999999999999999999999999988762
Q ss_pred ------CccccceeeeceeeCCCCEEEEchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCCccceeeccCCCCCCcch
Q 047802 54 ------RQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFELLPFSSGRRMCPGV 127 (185)
Q Consensus 54 ------r~~~~d~~i~~~~i~~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~fg~G~~~C~G~ 127 (185)
|...+|..++||.||+||.|.+..+.+.+||++|++|++|+|+||++.+. ...+++.++|||.|+|+|+|+
T Consensus 392 v~~~~~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~F~PeRWL~~~~---~~~~pF~~LPFGfG~R~C~GR 468 (519)
T KOG0159|consen 392 VVPGNGRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEEFLPERWLKPST---KTIHPFASLPFGFGPRMCLGR 468 (519)
T ss_pred cccccccccchhceeccceecCCCeEEEeehhhccChhhCCCccccChhhhccccc---CCCCCceecCCCCCccccchH
Confidence 89999999999999999999999999999999999999999999998762 445899999999999999999
Q ss_pred HHHHHHHHHHHHHhcccceeecCCCCCCCCcccceeeeecCCCeEEEEEecCC
Q 047802 128 SFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVEKSTPLEVLVSPRLS 180 (185)
Q Consensus 128 ~la~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~ 180 (185)
+||.+||-++++.++++|+++...++| ......+++.|..++.+++++|..
T Consensus 469 RiAElEl~llLarllr~f~V~~~~~~p--v~~~~~~il~P~~~l~f~f~~r~~ 519 (519)
T KOG0159|consen 469 RIAELELHLLLARLLRNFKVEFLHEEP--VEYVYRFILVPNRPLRFKFRPRNE 519 (519)
T ss_pred HHHHHHHHHHHHHHHHhcceeecCCCC--ccceeEEEEcCCCCcceeeeeCCC
Confidence 999999999999999999999987654 444567788899999999999863
No 24
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00 E-value=2.9e-40 Score=273.84 Aligned_cols=168 Identities=20% Similarity=0.372 Sum_probs=146.6
Q ss_pred CchhhHHHHHHHHHHhhhhcHHHHHHHHHHHHhhChHHHHHHHHHHhHhhCC----C-----------------------
Q 047802 1 MTTLYTLPILQALILAATDTTAVTLTWIISPLLNHHDILNKARNELDIQVGT----K----------------------- 53 (185)
Q Consensus 1 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~----~----------------------- 53 (185)
+++++|.+++.++++||+|||+++++|++++|++||++|+|+++|++++.+. .
T Consensus 260 ~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl 339 (463)
T PLN02774 260 LTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPIDWNDYKSMRFTRAVIFETSRL 339 (463)
T ss_pred CCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCCHHHHhcCcHHHHHHHHHHhc
Confidence 5789999999999999999999999999999999999999999999987631 0
Q ss_pred --------CccccceeeeceeeCCCCEEEEchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCCccceeeccCCCCCCc
Q 047802 54 --------RQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFELLPFSSGRRMCP 125 (185)
Q Consensus 54 --------r~~~~d~~i~~~~i~~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~fg~G~~~C~ 125 (185)
|.+.+|++++|+.||||+.|+++.+.+||||++|+||++|+|+||++.+. . ....|+|||+|+|.|+
T Consensus 340 ~P~v~~~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~----~-~~~~~lpFG~G~r~C~ 414 (463)
T PLN02774 340 ATIVNGVLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSL----E-SHNYFFLFGGGTRLCP 414 (463)
T ss_pred CCCCCCcccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCc----C-CCccccCcCCCCCcCC
Confidence 88999999999999999999999999999999999999999999996431 1 1235999999999999
Q ss_pred chHHHHHHHHHHHHHhcccceeecCCCCCCCCcccceeeeecCCCeEEEEEe
Q 047802 126 GVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVEKSTPLEVLVSP 177 (185)
Q Consensus 126 G~~la~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 177 (185)
|+++|.+|++++++.|+++|++++.++.+.... ..+.|++++++++++
T Consensus 415 G~~~A~~e~~~~la~Ll~~f~~~~~~~~~~~~~----~~~~p~~g~~~~~~~ 462 (463)
T PLN02774 415 GKELGIVEISTFLHYFVTRYRWEEVGGDKLMKF----PRVEAPNGLHIRVSP 462 (463)
T ss_pred cHHHHHHHHHHHHHHHHHhceEEECCCCccccC----CCCCCCCCceEEeee
Confidence 999999999999999999999999876432211 123467889998874
No 25
>PLN02966 cytochrome P450 83A1
Probab=100.00 E-value=3.6e-40 Score=275.72 Aligned_cols=175 Identities=31% Similarity=0.653 Sum_probs=146.7
Q ss_pred CchhhHHHHHHHHHHhhhhcHHHHHHHHHHHHhhChHHHHHHHHHHhHhhCC----C-----------------------
Q 047802 1 MTTLYTLPILQALILAATDTTAVTLTWIISPLLNHHDILNKARNELDIQVGT----K----------------------- 53 (185)
Q Consensus 1 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~----~----------------------- 53 (185)
++++++.++++++++||+|||+++++|++++|++||++|+|+++|++++.+. .
T Consensus 285 l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~ 364 (502)
T PLN02966 285 FTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIE 364 (502)
T ss_pred CCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccC
Confidence 4688999999999999999999999999999999999999999999987631 0
Q ss_pred --------CccccceeeeceeeCCCCEEEEchhhhccCCCCC-CCCCCCCCCccccCCCCCCcCCCccceeeccCCCCCC
Q 047802 54 --------RQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVW-EEPCKFQPERFLTRHKDTDVRGQNFELLPFSSGRRMC 124 (185)
Q Consensus 54 --------r~~~~d~~i~~~~i~~g~~v~~~~~~~~~d~~~~-~~p~~f~P~R~~~~~~~~~~~~~~~~~~~fg~G~~~C 124 (185)
|.+.+|++++|+.||+||.|.++.+.+||||++| +||++|+|+||++.+. .....+..|+|||.|+|.|
T Consensus 365 p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeRwl~~~~--~~~~~~~~~~pFg~G~R~C 442 (502)
T PLN02966 365 PVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEV--DFKGTDYEFIPFGSGRRMC 442 (502)
T ss_pred CCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhhCChhhhcCCCC--CcCCCcCCccCCCCCCCCC
Confidence 7888999999999999999999999999999999 9999999999996532 1122466899999999999
Q ss_pred cchHHHHHHHHHHHHHhcccceeecCCCCC---CCCcccceeeeecCCCeEEEEEecC
Q 047802 125 PGVSFALQVMQFTLASLPHGFDIATPSNEP---LDMGERLGLTVEKSTPLEVLVSPRL 179 (185)
Q Consensus 125 ~G~~la~~~~~~~~~~ll~~f~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~R~ 179 (185)
+|++||++|++++++.|+++|+|++.++.+ ++.....++...+...+ ++++|+
T Consensus 443 ~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 498 (502)
T PLN02966 443 PGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAMHKSQHL--KLVPEK 498 (502)
T ss_pred CCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCeeeccCCCe--EEEEEe
Confidence 999999999999999999999999887642 22223335544344444 555543
No 26
>PLN02936 epsilon-ring hydroxylase
Probab=100.00 E-value=8.3e-40 Score=272.73 Aligned_cols=177 Identities=30% Similarity=0.511 Sum_probs=151.1
Q ss_pred CchhhHHHHHHHHHHhhhhcHHHHHHHHHHHHhhChHHHHHHHHHHhHhhCCC---------------------------
Q 047802 1 MTTLYTLPILQALILAATDTTAVTLTWIISPLLNHHDILNKARNELDIQVGTK--------------------------- 53 (185)
Q Consensus 1 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~--------------------------- 53 (185)
+++++|..+++.+++||+|||+++++|++|+|++||++|+++++|++.+.+..
T Consensus 274 ~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~ 353 (489)
T PLN02936 274 VSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVLQGRPPTYEDIKELKYLTRCINESMRLYPHP 353 (489)
T ss_pred CCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCCCCCHHHHhhCHHHHHHHHHhhhcCCCc
Confidence 47889999999999999999999999999999999999999999999775432
Q ss_pred -----CccccceeeeceeeCCCCEEEEchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCCccceeeccCCCCCCcchH
Q 047802 54 -----RQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFELLPFSSGRRMCPGVS 128 (185)
Q Consensus 54 -----r~~~~d~~i~~~~i~~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~fg~G~~~C~G~~ 128 (185)
|.+.+|+.++|+.||+|+.|.++.+.+||||++|+||++|+|+||+..+........+..|+|||.|+|.|+|++
T Consensus 354 ~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~ 433 (489)
T PLN02936 354 PVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQ 433 (489)
T ss_pred ccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHH
Confidence 444566777999999999999999999999999999999999999964321111223568999999999999999
Q ss_pred HHHHHHHHHHHHhcccceeecCCCCCCCCcccceeeeecCCCeEEEEEecC
Q 047802 129 FALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVEKSTPLEVLVSPRL 179 (185)
Q Consensus 129 la~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~ 179 (185)
||+++++++++.|+++|++++++++++.. ..++...++.+++|++++|.
T Consensus 434 la~~~~~~~la~ll~~f~~~~~~~~~~~~--~~~~~~~~~~~~~v~~~~R~ 482 (489)
T PLN02936 434 FALLEAIVALAVLLQRLDLELVPDQDIVM--TTGATIHTTNGLYMTVSRRR 482 (489)
T ss_pred HHHHHHHHHHHHHHHhCeEEecCCCccce--ecceEEeeCCCeEEEEEeee
Confidence 99999999999999999999887654322 23455667889999999986
No 27
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00 E-value=4.7e-39 Score=267.97 Aligned_cols=171 Identities=20% Similarity=0.330 Sum_probs=150.3
Q ss_pred CchhhHHHHHHHHHHhhhhcHHHHHHHHHHHHhhChHHHHHHHHHHhHhhCC----------------------------
Q 047802 1 MTTLYTLPILQALILAATDTTAVTLTWIISPLLNHHDILNKARNELDIQVGT---------------------------- 52 (185)
Q Consensus 1 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~---------------------------- 52 (185)
+++++|..+++.+++||+|||+++++|++++|++||++|+|+++|++.+.+.
T Consensus 283 ~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lR 362 (490)
T PLN02302 283 LDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLR 362 (490)
T ss_pred CCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHH
Confidence 4788999999999999999999999999999999999999999999976531
Q ss_pred --------CCccccceeeeceeeCCCCEEEEchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCCccceeeccCCCCCC
Q 047802 53 --------KRQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFELLPFSSGRRMC 124 (185)
Q Consensus 53 --------~r~~~~d~~i~~~~i~~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~fg~G~~~C 124 (185)
.|.+.+|++++|+.||+|+.|.++.+.+|||+++|+||++|+|+||++.. ..+..++|||+|+|.|
T Consensus 363 l~p~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR~~~~~------~~~~~~~pFG~G~r~C 436 (490)
T PLN02302 363 LINISLTVFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRWDNYT------PKAGTFLPFGLGSRLC 436 (490)
T ss_pred hCCCcccchhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccChhhcCCCC------CCCCCccCCCCCCcCC
Confidence 08889999999999999999999999999999999999999999999643 2456789999999999
Q ss_pred cchHHHHHHHHHHHHHhcccceeecCCCCCCCCcccceeeeecCCCeEEEEEecCC
Q 047802 125 PGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVEKSTPLEVLVSPRLS 180 (185)
Q Consensus 125 ~G~~la~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~ 180 (185)
+|+++|.+|++++++.|+++|++++.+++. ++. ......|..++.+++++|.+
T Consensus 437 ~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-~~~--~~~~~~p~~~~~~~~~~~~~ 489 (490)
T PLN02302 437 PGNDLAKLEISIFLHHFLLGYRLERLNPGC-KVM--YLPHPRPKDNCLARITKVAS 489 (490)
T ss_pred CcHHHHHHHHHHHHHHHHhcCeeEEcCCCC-cce--eCCCCCCCCCceEEEEeccC
Confidence 999999999999999999999999875421 222 12236778899999999976
No 28
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00 E-value=3.5e-39 Score=267.40 Aligned_cols=168 Identities=23% Similarity=0.403 Sum_probs=147.6
Q ss_pred CchhhHHHHHHHHHHhhhhcHHHHHHHHHHHHhhChHHHHHHHHHHhHhhCCC---------------------------
Q 047802 1 MTTLYTLPILQALILAATDTTAVTLTWIISPLLNHHDILNKARNELDIQVGTK--------------------------- 53 (185)
Q Consensus 1 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~--------------------------- 53 (185)
++++++.++++.+++||+|||+++++|++++|++||++|+|+++|++.+.+..
T Consensus 260 l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl 339 (463)
T PLN02196 260 LTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRV 339 (463)
T ss_pred CCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhc
Confidence 57899999999999999999999999999999999999999999998765310
Q ss_pred --------CccccceeeeceeeCCCCEEEEchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCCccceeeccCCCCCCc
Q 047802 54 --------RQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFELLPFSSGRRMCP 125 (185)
Q Consensus 54 --------r~~~~d~~i~~~~i~~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~fg~G~~~C~ 125 (185)
|.+.+|++++||.||||+.|.++.+++|||+++|+||++|+|+||+... .+..++|||.|+|.|+
T Consensus 340 ~p~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~~-------~~~~~lpFG~G~r~C~ 412 (463)
T PLN02196 340 ASILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVAP-------KPNTFMPFGNGTHSCP 412 (463)
T ss_pred CCCccccceeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCCC-------CCCcccCcCCCCCCCc
Confidence 8888999999999999999999999999999999999999999999632 3568999999999999
Q ss_pred chHHHHHHHHHHHHHhcccceeecCCCCCCCCcccceeeeecCCCeEEEEEec
Q 047802 126 GVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVEKSTPLEVLVSPR 178 (185)
Q Consensus 126 G~~la~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R 178 (185)
|+++|++|++++++.|+++|++++.+++. +.. ......|+.+++|+++.+
T Consensus 413 G~~~A~~e~~~~la~ll~~f~~~~~~~~~-~~~--~~~~~~p~~~~~~~~~~~ 462 (463)
T PLN02196 413 GNELAKLEISVLIHHLTTKYRWSIVGTSN-GIQ--YGPFALPQNGLPIALSRK 462 (463)
T ss_pred hHHHHHHHHHHHHHHHHHhcEEEEcCCCC-ceE--EcccccCCCCceEEEecC
Confidence 99999999999999999999999876532 222 222345788988888764
No 29
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.6e-39 Score=256.36 Aligned_cols=178 Identities=26% Similarity=0.463 Sum_probs=157.9
Q ss_pred CchhhHHHHHHHHHHhhhhcHHHHHHHHHHHHhhChHHHHHHHHHHhHhhCCC---------------------------
Q 047802 1 MTTLYTLPILQALILAATDTTAVTLTWIISPLLNHHDILNKARNELDIQVGTK--------------------------- 53 (185)
Q Consensus 1 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~--------------------------- 53 (185)
+++++++..++.++|||..||+.+.+|++++|++||++++.+++|+.+++++.
T Consensus 269 ~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~~d~L~~lplL~~~IkEtLRL~~ 348 (486)
T KOG0684|consen 269 TTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLTYDQLKDLPLLDSCIKETLRLHP 348 (486)
T ss_pred CcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCCHHHHhcchHHHHHHHHHHhcCC
Confidence 47899999999999999999999999999999999999999999999999765
Q ss_pred ------Cccccceeeec----eeeCCCCEEEEchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCCcc--ceeeccCCC
Q 047802 54 ------RQSMEECTVSG----YNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNF--ELLPFSSGR 121 (185)
Q Consensus 54 ------r~~~~d~~i~~----~~i~~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~--~~~~fg~G~ 121 (185)
|.+.+|.++.+ |.||+|..|.+++..+||||++|++|++|+|+||++++++....+... .|||||+|.
T Consensus 349 p~~~~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr 428 (486)
T KOG0684|consen 349 PAHSLMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGR 428 (486)
T ss_pred chhhHHHhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCCCcccccccccccccccccCCCc
Confidence 78888998865 999999999999999999999999999999999998876554444444 459999999
Q ss_pred CCCcchHHHHHHHHHHHHHhcccceeecCCCCCCCCcccceeeeecCCCeEEEEEecC
Q 047802 122 RMCPGVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVEKSTPLEVLVSPRL 179 (185)
Q Consensus 122 ~~C~G~~la~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~ 179 (185)
|.|||+.||.+|+|+++..++++||+++.+|+. +.......+..|.++++++.+.|.
T Consensus 429 ~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~~-P~~d~s~~v~~P~g~v~irYK~R~ 485 (486)
T KOG0684|consen 429 HRCPGRSFAYLEIKQFISLLLRHFDLELIDGPF-PEVDYSRMVMQPEGDVRIRYKRRP 485 (486)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHcceeecCCCC-CCCCHHHhhcCCCCCceEEEeecC
Confidence 999999999999999999999999999999732 222233447789999999999885
No 30
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00 E-value=1.6e-38 Score=263.86 Aligned_cols=172 Identities=22% Similarity=0.325 Sum_probs=151.6
Q ss_pred CchhhHHHHHHHHHHhhhhcHHHHHHHHHHHHhhChHHHHHHHHHHhHhhCC----C-----------------------
Q 047802 1 MTTLYTLPILQALILAATDTTAVTLTWIISPLLNHHDILNKARNELDIQVGT----K----------------------- 53 (185)
Q Consensus 1 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~----~----------------------- 53 (185)
++++++..+++.+++||+|||+.+++|++++|++||++|+++++|++.+... .
T Consensus 263 ~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl 342 (472)
T PLN02987 263 FSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRV 342 (472)
T ss_pred CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHc
Confidence 5789999999999999999999999999999999999999999999876531 0
Q ss_pred --------CccccceeeeceeeCCCCEEEEchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCCccceeeccCCCCCCc
Q 047802 54 --------RQSMEECTVSGYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFELLPFSSGRRMCP 125 (185)
Q Consensus 54 --------r~~~~d~~i~~~~i~~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~fg~G~~~C~ 125 (185)
|.+.+|++++||.||+|+.|.++.+.+|+|+++|++|++|+|+||++.... ......++|||.|+|.|+
T Consensus 343 ~p~~~~~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~---~~~~~~~l~FG~G~r~C~ 419 (472)
T PLN02987 343 ANIIGGIFRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGT---TVPSNVFTPFGGGPRLCP 419 (472)
T ss_pred cCCcCCccccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCC---CCCCcceECCCCCCcCCC
Confidence 788899999999999999999999999999999999999999999875321 123467999999999999
Q ss_pred chHHHHHHHHHHHHHhcccceeecCCCCCCCCcccceeeeecCCCeEEEEEecC
Q 047802 126 GVSFALQVMQFTLASLPHGFDIATPSNEPLDMGERLGLTVEKSTPLEVLVSPRL 179 (185)
Q Consensus 126 G~~la~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~ 179 (185)
|+++|.+|++++++.|+++|++++.++.++.+ ...+.|..++.+++++|.
T Consensus 420 G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~----~~~~~p~~~~~~~~~~r~ 469 (472)
T PLN02987 420 GYELARVALSVFLHRLVTRFSWVPAEQDKLVF----FPTTRTQKRYPINVKRRD 469 (472)
T ss_pred cHHHHHHHHHHHHHHHHhceEEEECCCCceee----cccccCCCCceEEEEecc
Confidence 99999999999999999999999886543222 336788889999999984
No 31
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=5.5e-36 Score=244.76 Aligned_cols=163 Identities=30% Similarity=0.483 Sum_probs=139.6
Q ss_pred CchhhHHHHHHHHHHhhhhcHHHHHHHHHHHHhhChHHHHHHHHHHhH-hh----C-----------CCCccccceeeec
Q 047802 1 MTTLYTLPILQALILAATDTTAVTLTWIISPLLNHHDILNKARNELDI-QV----G-----------TKRQSMEECTVSG 64 (185)
Q Consensus 1 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~-~~----~-----------~~r~~~~d~~i~~ 64 (185)
||+++|+++++.+++||+|||+++|+|.+|.|++||+.++++++|.+. .. . ..|.+.+|++++|
T Consensus 232 lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~~~~~~~v~E~LR~~ppv~~~~R~~~~d~~igg 311 (411)
T COG2124 232 LSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDRPLLEAVVEETLRLYPPVPLARRVATEDVELGG 311 (411)
T ss_pred CCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcchHHHHHHHHHHHHhCCchhccceeccCCEeeCC
Confidence 689999999999999999999999999999999999999999999884 21 1 1188899999999
Q ss_pred eeeCCCCEEEEchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCCccceeeccCCCCCCcchHHHHHHHHHHHHHhccc
Q 047802 65 YNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFELLPFSSGRRMCPGVSFALQVMQFTLASLPHG 144 (185)
Q Consensus 65 ~~i~~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~fg~G~~~C~G~~la~~~~~~~~~~ll~~ 144 (185)
+.||+|+.|.++++.+||||++|++|++|+|+||.. .++|||+|+|.|+|..||++|++++++.|+++
T Consensus 312 ~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~~------------~~l~FG~G~H~ClG~~lA~~E~~~~l~~ll~r 379 (411)
T COG2124 312 YRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFNN------------AHLPFGGGPHRCLGAALARLELKVALAELLRR 379 (411)
T ss_pred EEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCCC------------CCcCCCCCCccccCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999983 35999999999999999999999999999999
Q ss_pred ceeecCCCCCCCCcccceeeeecCCCeEEEEEec
Q 047802 145 FDIATPSNEPLDMGERLGLTVEKSTPLEVLVSPR 178 (185)
Q Consensus 145 f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R 178 (185)
|++....+ +... .......+..+..+.++.|
T Consensus 380 ~~~~~~~~-~~~~--~~~~~~~~~g~~~l~v~~~ 410 (411)
T COG2124 380 FPLLLLAE-PPPL--VRRPTLVPRGGERLPVRRR 410 (411)
T ss_pred CchhhcCC-CCCc--cccccccCCCcceeeeecC
Confidence 99987765 2111 2233344455555665544
No 32
>PLN02648 allene oxide synthase
Probab=99.97 E-value=2.4e-31 Score=220.77 Aligned_cols=147 Identities=18% Similarity=0.321 Sum_probs=125.2
Q ss_pred CchhhHHHHHHH-HHHhhhhcHHHHHHHHHHHHhhChH-HHHHHHHHHhHhhCC---C----------------------
Q 047802 1 MTTLYTLPILQA-LILAATDTTAVTLTWIISPLLNHHD-ILNKARNELDIQVGT---K---------------------- 53 (185)
Q Consensus 1 l~~~~i~~~~~~-~~~ag~~tt~~~l~~~l~~l~~~p~-~~~~l~~Ei~~~~~~---~---------------------- 53 (185)
|++++++++++. +.+++++|++++++|++|+|++||+ +|+++++|++.+.+. .
T Consensus 267 l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl 346 (480)
T PLN02648 267 ISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRI 346 (480)
T ss_pred CCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhh
Confidence 578999998875 4467788888899999999999995 999999999988741 1
Q ss_pred --------Cccccceeee----ceeeCCCCEEEEchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCCccceeec----
Q 047802 54 --------RQSMEECTVS----GYNFPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFELLPF---- 117 (185)
Q Consensus 54 --------r~~~~d~~i~----~~~i~~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~f---- 117 (185)
|++.+|++++ ||.||+|+.|.++.+.+|||+++|+||++|+|+||++++.. ....+++|
T Consensus 347 ~p~v~~~~r~a~~d~~l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~-----~~~~~~~f~~g~ 421 (480)
T PLN02648 347 EPPVPFQYGRAREDFVIESHDAAFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGE-----KLLKYVFWSNGR 421 (480)
T ss_pred cCCcccccceecCCEEEecCCceEEECCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCcc-----ccccccccCCCc
Confidence 6788999996 79999999999999999999999999999999999864321 11233444
Q ss_pred -----cCCCCCCcchHHHHHHHHHHHHHhcccce-eecCCC
Q 047802 118 -----SSGRRMCPGVSFALQVMQFTLASLPHGFD-IATPSN 152 (185)
Q Consensus 118 -----g~G~~~C~G~~la~~~~~~~~~~ll~~f~-~~~~~~ 152 (185)
|+|+|.|+|++||++|++++++.|+++|+ |++.++
T Consensus 422 ~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~~~l~~~ 462 (480)
T PLN02648 422 ETESPTVGNKQCAGKDFVVLVARLFVAELFLRYDSFEIEVD 462 (480)
T ss_pred ccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhCEEeecCC
Confidence 67789999999999999999999999998 998765
No 33
>PF12554 MOZART1: Mitotic-spindle organizing gamma-tubulin ring associated; InterPro: IPR022214 This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important.
Probab=75.31 E-value=11 Score=21.23 Aligned_cols=42 Identities=14% Similarity=0.113 Sum_probs=37.3
Q ss_pred hHHHHHHHHHHhhhhcHHHHHHHHHHHHhhChHHHHHHHHHH
Q 047802 5 YTLPILQALILAATDTTAVTLTWIISPLLNHHDILNKARNEL 46 (185)
Q Consensus 5 ~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei 46 (185)
++...+..++-.|.+..+..++--+.+..-||+....+.+|+
T Consensus 6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el 47 (48)
T PF12554_consen 6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL 47 (48)
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence 466778889999999999999999999999999999998886
No 34
>PF05952 ComX: Bacillus competence pheromone ComX; InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible. DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=66.13 E-value=8 Score=22.59 Aligned_cols=20 Identities=20% Similarity=0.380 Sum_probs=16.6
Q ss_pred HHHHHHHhhChHHHHHHHHH
Q 047802 26 TWIISPLLNHHDILNKARNE 45 (185)
Q Consensus 26 ~~~l~~l~~~p~~~~~l~~E 45 (185)
.-++.||.+||++.+++.+.
T Consensus 3 Q~iV~YLv~nPevl~kl~~g 22 (57)
T PF05952_consen 3 QEIVNYLVQNPEVLEKLKEG 22 (57)
T ss_pred HHHHHHHHHChHHHHHHHcC
Confidence 45778999999999999753
No 35
>PF08492 SRP72: SRP72 RNA-binding domain; InterPro: IPR013699 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=57.74 E-value=8.3 Score=22.71 Aligned_cols=9 Identities=44% Similarity=1.029 Sum_probs=7.0
Q ss_pred CCCccccCC
Q 047802 94 QPERFLTRH 102 (185)
Q Consensus 94 ~P~R~~~~~ 102 (185)
||||||.-.
T Consensus 44 DPERWLP~~ 52 (59)
T PF08492_consen 44 DPERWLPKR 52 (59)
T ss_pred CccccCchh
Confidence 799999753
No 36
>PF12508 DUF3714: Protein of unknown function (DUF3714) ; InterPro: IPR022187 Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=52.81 E-value=12 Score=27.81 Aligned_cols=21 Identities=29% Similarity=0.548 Sum_probs=17.1
Q ss_pred ccccceeeeceeeCCCCEEEE
Q 047802 55 QSMEECTVSGYNFPSGTQLFI 75 (185)
Q Consensus 55 ~~~~d~~i~~~~i~~g~~v~~ 75 (185)
+..+|+.++|..||+|+.+.-
T Consensus 74 RLle~i~i~g~~IPkgt~l~G 94 (200)
T PF12508_consen 74 RLLEDIQIGGILIPKGTYLYG 94 (200)
T ss_pred EEcCceEECCEEeCCCCEEEE
Confidence 456788999999999987654
No 37
>PF14129 DUF4296: Domain of unknown function (DUF4296)
Probab=47.07 E-value=71 Score=20.09 Aligned_cols=42 Identities=5% Similarity=-0.010 Sum_probs=32.7
Q ss_pred HHHHHHHhhhhcHHHHHHHHHHHHhhChHHHHHHHHHHhHhh
Q 047802 9 ILQALILAATDTTAVTLTWIISPLLNHHDILNKARNELDIQV 50 (185)
Q Consensus 9 ~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~ 50 (185)
.....++--++.++..+...+.+-+.||+...++.+.+..-+
T Consensus 37 ~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL 78 (87)
T PF14129_consen 37 AYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL 78 (87)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 344556666777888888889899999999999988876544
No 38
>PF09201 SRX: SRX; InterPro: IPR015284 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel. This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=42.59 E-value=22 Score=24.85 Aligned_cols=23 Identities=17% Similarity=0.261 Sum_probs=16.6
Q ss_pred CCCcchHHHHHHHHHHHHHhccc
Q 047802 122 RMCPGVSFALQVMQFTLASLPHG 144 (185)
Q Consensus 122 ~~C~G~~la~~~~~~~~~~ll~~ 144 (185)
..|.|+.||...+-.++.+|+..
T Consensus 18 yN~~gKKFsE~QiN~FIs~lIts 40 (148)
T PF09201_consen 18 YNCLGKKFSETQINAFISHLITS 40 (148)
T ss_dssp EETTS----HHHHHHHHHHHHHS
T ss_pred ecccchHHHHHHHHHHHHHHhcC
Confidence 36999999999999999999864
No 39
>PF08285 DPM3: Dolichol-phosphate mannosyltransferase subunit 3 (DPM3); InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=40.06 E-value=45 Score=21.47 Aligned_cols=28 Identities=11% Similarity=0.177 Sum_probs=21.4
Q ss_pred HHHHHHHHHhhChHHHHHHHHHHhHhhC
Q 047802 24 TLTWIISPLLNHHDILNKARNELDIQVG 51 (185)
Q Consensus 24 ~l~~~l~~l~~~p~~~~~l~~Ei~~~~~ 51 (185)
.+.|.++..-..|+..+.|++||+++..
T Consensus 55 ~lgy~v~tFnDcpeA~~eL~~eI~eAK~ 82 (91)
T PF08285_consen 55 TLGYGVATFNDCPEAAKELQKEIKEAKA 82 (91)
T ss_pred HHHHhhhccCCCHHHHHHHHHHHHHHHH
Confidence 3555556666789999999999998754
No 40
>PF11138 DUF2911: Protein of unknown function (DUF2911); InterPro: IPR021314 This bacterial family of proteins has no known function.
Probab=38.55 E-value=41 Score=23.73 Aligned_cols=40 Identities=18% Similarity=0.458 Sum_probs=26.8
Q ss_pred cccceeeeceeeCCCCEEEEchh-------hhccCCCCCCCCCCCCCC
Q 047802 56 SMEECTVSGYNFPSGTQLFINVW-------KLQRDPHVWEEPCKFQPE 96 (185)
Q Consensus 56 ~~~d~~i~~~~i~~g~~v~~~~~-------~~~~d~~~~~~p~~f~P~ 96 (185)
..+|+.++|..||+|++-...+. .+|++...|.. ..++|+
T Consensus 52 f~~dv~igGk~l~AG~Ysl~tiP~~~~WtvI~n~~~~~wG~-~~Y~~~ 98 (145)
T PF11138_consen 52 FSKDVTIGGKKLKAGTYSLFTIPGEDEWTVIFNKDTDQWGA-YNYDPS 98 (145)
T ss_pred ECCCeEECCEEcCCeeEEEEEecCCCeEEEEEECCCCccCc-cccCch
Confidence 34689999999999988665432 34666677755 344443
No 41
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=35.68 E-value=16 Score=21.00 Aligned_cols=11 Identities=36% Similarity=0.761 Sum_probs=9.2
Q ss_pred eeccCCCCCCc
Q 047802 115 LPFSSGRRMCP 125 (185)
Q Consensus 115 ~~fg~G~~~C~ 125 (185)
-+||-|.|.|-
T Consensus 12 ~kfg~GsrsC~ 22 (56)
T KOG3506|consen 12 RKFGQGSRSCR 22 (56)
T ss_pred cccCCCCccee
Confidence 36999999985
No 42
>PF14483 Cut8_M: Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=33.74 E-value=75 Score=16.77 Aligned_cols=21 Identities=24% Similarity=0.420 Sum_probs=15.0
Q ss_pred HHHHHHHHHh-hChHHHHHHHH
Q 047802 24 TLTWIISPLL-NHHDILNKARN 44 (185)
Q Consensus 24 ~l~~~l~~l~-~~p~~~~~l~~ 44 (185)
.+...+..++ +||++++.++.
T Consensus 14 qL~~lL~~l~~~HPei~~~i~~ 35 (38)
T PF14483_consen 14 QLQSLLQSLCERHPEIQQEIRS 35 (38)
T ss_dssp HHHHHHHHHHHHSTHHHHHHHT
T ss_pred HHHHHHHHHHHhChhHHHHHHh
Confidence 4555666665 89999988764
No 43
>PF15080 DUF4547: Domain of unknown function (DUF4547)
Probab=32.42 E-value=1.8e+02 Score=20.95 Aligned_cols=49 Identities=6% Similarity=0.164 Sum_probs=37.3
Q ss_pred CchhhHHHHHHHHHHhhhhcHHHH----------HHHHHHHHhhChHHHHHHHHHHhHh
Q 047802 1 MTTLYTLPILQALILAATDTTAVT----------LTWIISPLLNHHDILNKARNELDIQ 49 (185)
Q Consensus 1 l~~~~i~~~~~~~~~ag~~tt~~~----------l~~~l~~l~~~p~~~~~l~~Ei~~~ 49 (185)
|.++++.+.|..|+.-|...--.+ +++++-.+.+|...|+-+..-+.-.
T Consensus 113 LqE~dv~aLCtFfiahgnkaehy~a~~R~~yi~dv~~mItnmVkNqalq~~llrAvqvi 171 (196)
T PF15080_consen 113 LQEGDVTALCTFFIAHGNKAEHYAAKVRQMYIRDVTFMITNMVKNQALQDGLLRAVQVI 171 (196)
T ss_pred CCcccHHHHHHHHHHhcchHhHhHHHHHHHHHhhHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 467888898988887787765443 6678888999999999887766543
No 44
>PF02663 FmdE: FmdE, Molybdenum formylmethanofuran dehydrogenase operon ; InterPro: IPR003814 Formylmethanofuran dehydrogenases (1.2.99.5 from EC) is found in methanogenic and sulphate-reducing archaea. The enzyme contains molybdenum or tungsten, a molybdopterin guanine dinuceotide cofactor (MGD) and iron-sulphur clusters []. It catalyses the reversible reduction of CO2 and methanofuran via N-carboxymethanofuran (carbamate) to N-formylmethanofuran, the first and second steps in methanogenesis from CO2 [, ]. This reaction is important for the reduction of CO2 to methane, in autotrophic CO2 fixation, and in CO2 formation from reduced C1 units []. The synthesis of formylmethanofuran is crucial for the energy metabolism of archaea. Methanogenic archaea derives the energy for autrophic growth from the reduction of CO2 with molecular hydrogen as the electron donor []. The process of methanogenesis consists of a series of reduction reactions at which the one-carbon unit derived from CO2 is bound to C1 carriers. There are two isoenzymes of formylmethanofuran dehydrogenase: a tungsten-containing isoenzyme (Fwd) and a molybdenum-containing isoenzyme (Fmd). The tungsten isoenzyme is constitutively transcribed, whereas transcription of the molybdenum operon is induced by molybdate []. The archaea Methanobacterium thermoautotrophicum contains a 4-subunit (FwdA, FwdB, FwdC, FwdD) tungsten formylmethanofuran dehydrogenase and a 3-subunit (FmdA, FmdB, FmdC) molybdenum formylmethanofuran dehydrogenase []. This entry represents subunit E of formylmethanofuran dehydrogenase enyzmes. The enzyme from Methanosarcina barkeri is a molybdenum iron-sulphur protein involved in methanogenesis. Subunit E protein is co-expressed with the enzyme but fails to co-purify and thus its function is unknown [].; PDB: 2GVI_A 3D00_A 2GLZ_A.
Probab=31.58 E-value=41 Score=22.95 Aligned_cols=22 Identities=23% Similarity=0.735 Sum_probs=16.9
Q ss_pred CCCcchHHHHHHHHHHHHHhcc
Q 047802 122 RMCPGVSFALQVMQFTLASLPH 143 (185)
Q Consensus 122 ~~C~G~~la~~~~~~~~~~ll~ 143 (185)
|.|||..++.+....++..|--
T Consensus 5 H~Cpgl~~G~r~~~~a~~~l~~ 26 (131)
T PF02663_consen 5 HLCPGLALGYRMAKYALEELGI 26 (131)
T ss_dssp S--HHHHHHHHHHHHHHHHHTS
T ss_pred CcCccHHHHHHHHHHHHHHcCC
Confidence 8999999999999888877643
No 45
>PF11227 DUF3025: Protein of unknown function (DUF3025); InterPro: IPR021390 Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function.
Probab=31.25 E-value=30 Score=26.03 Aligned_cols=27 Identities=30% Similarity=0.530 Sum_probs=21.4
Q ss_pred CEEEEchhhh-ccCCCCCCCCCCCCCCc
Q 047802 71 TQLFINVWKL-QRDPHVWEEPCKFQPER 97 (185)
Q Consensus 71 ~~v~~~~~~~-~~d~~~~~~p~~f~P~R 97 (185)
-...++-|.- |.|+.+|.|.+.|+|.|
T Consensus 184 PlLGiPGW~~~n~~~~FY~d~~~FRp~R 211 (212)
T PF11227_consen 184 PLLGIPGWWPDNEDPAFYDDTDVFRPGR 211 (212)
T ss_pred CccCCCCCCCCCCCcccccCccccCCCC
Confidence 3455555555 89999999999999988
No 46
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=25.03 E-value=57 Score=27.24 Aligned_cols=21 Identities=24% Similarity=0.374 Sum_probs=16.6
Q ss_pred ccccceeeeceeeCCCCEEEE
Q 047802 55 QSMEECTVSGYNFPSGTQLFI 75 (185)
Q Consensus 55 ~~~~d~~i~~~~i~~g~~v~~ 75 (185)
+..+|+.+++..||+||.+.-
T Consensus 277 RLle~~~v~~~~ipkgt~l~g 297 (410)
T TIGR03779 277 RLLEPIQAGDLVIPKGTVLYG 297 (410)
T ss_pred EEcCceeeCCEEecCCCEEEE
Confidence 455788889999999987654
No 47
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=24.69 E-value=2e+02 Score=18.44 Aligned_cols=44 Identities=18% Similarity=0.200 Sum_probs=29.4
Q ss_pred HHHHHHhhhhcHHHHHHHHHHHHhh-------ChHHHHHHHHHHhHhhCCC
Q 047802 10 LQALILAATDTTAVTLTWIISPLLN-------HHDILNKARNELDIQVGTK 53 (185)
Q Consensus 10 ~~~~~~ag~~tt~~~l~~~l~~l~~-------~p~~~~~l~~Ei~~~~~~~ 53 (185)
++++++.=..+|+...--=|..++. .|++.+.+|+||-.++..+
T Consensus 3 l~dff~~r~~~Sa~~AkeRLQiilA~eR~~~~~pd~l~~Lr~eIl~VI~KY 53 (88)
T COG0851 3 LFDFFFSRKKNSAETAKERLQLILAHERAAGLQPDYLEQLRKEILEVISKY 53 (88)
T ss_pred HHHHHHhcCCCcHHHHHHHHHHhhhhhhhcCCCcchHHHHHHHHHHHHHHH
Confidence 4566665444666665554444332 3889999999999988754
No 48
>PF14824 Sirohm_synth_M: Sirohaem biosynthesis protein central; PDB: 1KYQ_B.
Probab=23.07 E-value=1.1e+02 Score=15.34 Aligned_cols=16 Identities=13% Similarity=0.185 Sum_probs=11.8
Q ss_pred hChHHHHHHHHHHhHh
Q 047802 34 NHHDILNKARNELDIQ 49 (185)
Q Consensus 34 ~~p~~~~~l~~Ei~~~ 49 (185)
+.|.+-.++|+||.+.
T Consensus 14 ~sP~la~~iR~~ie~~ 29 (30)
T PF14824_consen 14 KSPRLARLIRKEIERL 29 (30)
T ss_dssp S-HHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHh
Confidence 3577888999998764
No 49
>PHA03162 hypothetical protein; Provisional
Probab=22.49 E-value=56 Score=22.57 Aligned_cols=23 Identities=17% Similarity=0.456 Sum_probs=17.1
Q ss_pred cCCCCCCcchHHHHHHHHHHHHH
Q 047802 118 SSGRRMCPGVSFALQVMQFTLAS 140 (185)
Q Consensus 118 g~G~~~C~G~~la~~~~~~~~~~ 140 (185)
++|.+.||++...+-++..=++.
T Consensus 2 ~~~~k~~pk~~~tmEeLaaeL~k 24 (135)
T PHA03162 2 AGGSKKCPKAQPTMEDLAAEIAK 24 (135)
T ss_pred CCCcCCCCccCCCHHHHHHHHHH
Confidence 46899999998877777655544
Done!