BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047808
(131 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9T039|EC14_ARATH Egg cell-secreted protein 1.4 OS=Arabidopsis thaliana GN=EC1.4 PE=2
SV=1
Length = 127
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 76/129 (58%), Gaps = 19/129 (14%)
Query: 1 MALNHVFFILALTCLIMANIANATSMNDCLNNNIKPGYDLATRLEASGGLTKCWNALMEL 60
MA N F +T LI+ + N T L + ++A RL+ SGGL +CWNAL EL
Sbjct: 1 MASNTTFLFSTVTLLII--LLNTTVSGRDLP--AESSTNIAARLQ-SGGLMECWNALYEL 55
Query: 61 KSCSNEI--------ADIGPDCCRAIDIITRNCWSAMLTSLGFTAEEGNILRGYC----- 107
KSC+NEI +G CC ++DIIT NCW AMLTSLGFT EE N+LRG+C
Sbjct: 56 KSCTNEIVLFFLNGETKLGVSCCESVDIITTNCWPAMLTSLGFTPEEANVLRGFCQNPNS 115
Query: 108 -DAFSAPSP 115
D+ APSP
Sbjct: 116 GDSSPAPSP 124
>sp|Q9SJ24|EC12_ARATH Egg cell-secreted protein 1.2 OS=Arabidopsis thaliana GN=EC1.2 PE=2
SV=1
Length = 125
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 71/117 (60%), Gaps = 15/117 (12%)
Query: 1 MALNHVFFILALTCLIMANIANATSMNDCLNNNIKPGYDLATRLEASGGLTKCWNALMEL 60
MA N F + L++ NI+ T + ++A RL GGL +CWNAL EL
Sbjct: 1 MASNTSFLFATIAILLVLNISGRTL------PETEDSTNIAARLNG-GGLMECWNALYEL 53
Query: 61 KSCSNEI--------ADIGPDCCRAIDIITRNCWSAMLTSLGFTAEEGNILRGYCDA 109
KSC+NEI +G DCC+A+++IT +CW AMLTSLGFT++E N+LRG+C +
Sbjct: 54 KSCTNEIVLFFLNGETKLGVDCCQAVEVITTDCWPAMLTSLGFTSDETNVLRGFCQS 110
>sp|Q9SJ23|EC13_ARATH Egg cell-secreted protein 1.3 OS=Arabidopsis thaliana GN=EC1.3 PE=2
SV=1
Length = 125
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 74/125 (59%), Gaps = 18/125 (14%)
Query: 1 MALNHVFFILALTCLIMANIANATSMNDCLNNNIKPGYDLATRLEASGGLTKCWNALMEL 60
MA N F + +T L++ N+++ + NI A RL GGL +CW+AL EL
Sbjct: 1 MASNTSFLFVTVTLLLVLNVSSRALPPVADSTNI------AARLTG-GGLMQCWDALYEL 53
Query: 61 KSCSNEI--------ADIGPDCCRAIDIITRNCWSAMLTSLGFTAEEGNILRGYCDAFSA 112
KSC+NEI +G CC A+D+IT +CW AMLTSLGFT EE N+LRG+C +
Sbjct: 54 KSCTNEIVLFFLNGETKLGYGCCNAVDVITTDCWPAMLTSLGFTLEETNVLRGFCQ---S 110
Query: 113 PSPGG 117
P+ GG
Sbjct: 111 PNSGG 115
>sp|Q9SRD8|EC11_ARATH Egg cell-secreted protein 1.1 OS=Arabidopsis thaliana GN=EC1.1 PE=2
SV=1
Length = 158
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 8/112 (7%)
Query: 6 VFFILALTCLIMANIANATSMNDCLNNNIKPGYDLATRLEASGGLTKCWNALMELKSCSN 65
F I+ L ++ ++ A + P L RL+ CW++LM+L+ CS
Sbjct: 10 TFNIVTLMLMVASSTVTARPLMKPSMGTSSPTTSLVYRLKLDEDTGYCWDSLMQLQHCSG 69
Query: 66 EI--------ADIGPDCCRAIDIITRNCWSAMLTSLGFTAEEGNILRGYCDA 109
E+ IGP CC AI I R CW M+ LGFTA+EG++L+GYCD
Sbjct: 70 ELILFFLNGETYIGPGCCSAIRTIGRKCWPTMIGVLGFTAQEGDMLQGYCDG 121
>sp|Q9FGG1|EC15_ARATH Egg cell-secreted protein 1.5 OS=Arabidopsis thaliana GN=EC1.5 PE=2
SV=1
Length = 155
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 54/107 (50%), Gaps = 23/107 (21%)
Query: 40 LATRLEASGGLTKCWNALMELKSCSNEIAD----------------IGPDCCRAIDIITR 83
+AT +G L CWNA +ELKSC++EI I DCC AI ++ +
Sbjct: 40 MATDHSGAGNLMDCWNAGLELKSCTDEIVKFFLSQTGTSEPPVKGGIDKDCCGAIGLVVK 99
Query: 84 NCWSAMLTSLGFTAEEGNILRGYCDAFSA------PSPGGLVVIYQP 124
+CWS M TSLG T EGN LR YC+ F A PSP + P
Sbjct: 100 DCWSVMFTSLGLTTMEGNNLREYCE-FQAEKSELSPSPAPETLALSP 145
>sp|Q47BL9|OTC_DECAR Ornithine carbamoyltransferase OS=Dechloromonas aromatica (strain
RCB) GN=argF PE=3 SV=1
Length = 306
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Query: 73 DCCRAIDIITRNCWSAMLTSLGFTAEEGNILRGYCD 108
D CR D++T + W TS+GF AE ++ + D
Sbjct: 209 DACRGADLVTTDVW----TSMGFEAENEERIKAFAD 240
>sp|Q54KF1|FORC_DICDI Formin-C OS=Dictyostelium discoideum GN=forC PE=1 SV=1
Length = 1158
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 52 KCWNALME----LKSCSNEIADIGPDCCRAIDIITRNCWSAMLTSLGFTAEEGNILRGYC 107
+CW +++ LKS I + C IT NC ++L LG G++ RG
Sbjct: 773 RCWEFMLKIEDSLKSIIESIDTVLLACKELRTSITINCLFSLLLQLGNYLNGGHLYRGQS 832
Query: 108 DAFSAPSPGGLVVI 121
D F+ S ++ I
Sbjct: 833 DGFNLESLSKMIEI 846
>sp|O14057|GUAD_SCHPO Probable guanine deaminase OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=SPCC1672.03c PE=3 SV=1
Length = 527
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 11/68 (16%)
Query: 37 GYDLATRLEASGGLT--KCWNALMELKSCSNEIADIGPDCCRAIDIITRNCWSAMLTSLG 94
G ++ +R + G K W+AL I D+ + +DI R+ W ML+
Sbjct: 376 GAEVVSRGDQVGSFAVGKYWDAL---------IVDLSAETHSCVDIFERDTWPVMLSKWV 426
Query: 95 FTAEEGNI 102
FT+++ N+
Sbjct: 427 FTSDDRNL 434
>sp|Q04431|KRE28_YEAST Spindle pole body component KRE28 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=KRE28 PE=1 SV=1
Length = 385
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 8/39 (20%)
Query: 35 KPGYDLATR--------LEASGGLTKCWNALMELKSCSN 65
+ G++ A R LEA+G + CW++L ELK+ +N
Sbjct: 160 ETGHNFAERQDLINELYLEATGDIENCWDSLNELKNLTN 198
>sp|A1K7J9|OTC_AZOSB Ornithine carbamoyltransferase OS=Azoarcus sp. (strain BH72)
GN=arcB PE=3 SV=1
Length = 311
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Query: 73 DCCRAIDIITRNCWSAMLTSLGFTAEEGNILRGYCD 108
+ CR D++T + W TS+GF AE ++ + D
Sbjct: 210 EACRGADLVTTDVW----TSMGFEAENEARMKAFAD 241
>sp|C8Z692|KRE28_YEAS8 Spindle pole body component KRE28 OS=Saccharomyces cerevisiae
(strain Lalvin EC1118 / Prise de mousse) GN=KRE28 PE=3
SV=1
Length = 385
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 17/22 (77%)
Query: 44 LEASGGLTKCWNALMELKSCSN 65
LEA+G + CW++L ELK+ +N
Sbjct: 177 LEATGDIENCWDSLNELKNLTN 198
>sp|A6ZZB9|KRE28_YEAS7 Spindle pole body component KRE28 OS=Saccharomyces cerevisiae
(strain YJM789) GN=KRE28 PE=3 SV=1
Length = 385
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 17/22 (77%)
Query: 44 LEASGGLTKCWNALMELKSCSN 65
LEA+G + CW++L ELK+ +N
Sbjct: 177 LEATGDIENCWDSLNELKNLTN 198
>sp|B5VH51|KRE28_YEAS6 Spindle pole body component KRE28 OS=Saccharomyces cerevisiae
(strain AWRI1631) GN=KRE28 PE=3 SV=1
Length = 385
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 17/22 (77%)
Query: 44 LEASGGLTKCWNALMELKSCSN 65
LEA+G + CW++L ELK+ +N
Sbjct: 177 LEATGDIENCWDSLNELKNLTN 198
>sp|C7GKW3|KRE28_YEAS2 Spindle pole body component KRE28 OS=Saccharomyces cerevisiae
(strain JAY291) GN=KRE28 PE=3 SV=1
Length = 385
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 17/22 (77%)
Query: 44 LEASGGLTKCWNALMELKSCSN 65
LEA+G + CW++L ELK+ +N
Sbjct: 177 LEATGDIENCWDSLNELKNLTN 198
>sp|B3LFD9|KRE28_YEAS1 Spindle pole body component KRE28 OS=Saccharomyces cerevisiae
(strain RM11-1a) GN=KRE28 PE=3 SV=1
Length = 385
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 17/22 (77%)
Query: 44 LEASGGLTKCWNALMELKSCSN 65
LEA+G + CW++L ELK+ +N
Sbjct: 177 LEATGDIENCWDSLNELKNLTN 198
>sp|Q3SZI7|COG6_BOVIN Conserved oligomeric Golgi complex subunit 6 OS=Bos taurus GN=COG6
PE=2 SV=1
Length = 657
Score = 30.0 bits (66), Expect = 4.7, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 56 ALMELKSCSNEIADIGPDCCRAIDIITRN--CWSAMLTSLGFTAEEGNILRGYCDAFSAP 113
A E ++ + E DI P +A++ + + L G TA ++RG+ DA +
Sbjct: 230 AQSECRTLTQESCDISPVLTQAMEALQDRPVLYKYTLDEFG-TARRSTVVRGFIDALTRG 288
Query: 114 SPGG 117
PGG
Sbjct: 289 GPGG 292
>sp|Q12019|MDN1_YEAST Midasin OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=MDN1 PE=1 SV=1
Length = 4910
Score = 29.6 bits (65), Expect = 6.3, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 26/62 (41%)
Query: 4 NHVFFILALTCLIMANIANATSMNDCLNNNIKPGYDLATRLEASGGLTKCWNALMELKSC 63
N V LAL L + ++ND L+ IK L E G+ + L E K C
Sbjct: 172 NQVVIFLALKVLSLYLDMGEKTLNDMLDTYIKSRDSLLGHFEGDSGIDYSFLELNEAKRC 231
Query: 64 SN 65
+N
Sbjct: 232 AN 233
>sp|Q9Y2V7|COG6_HUMAN Conserved oligomeric Golgi complex subunit 6 OS=Homo sapiens
GN=COG6 PE=1 SV=2
Length = 657
Score = 29.3 bits (64), Expect = 7.1, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 56 ALMELKSCSNEIADIGPDCCRAIDIITRN--CWSAMLTSLGFTAEEGNILRGYCDAFSAP 113
A E ++ + E D+ P +A++ + + L G TA ++RG+ DA +
Sbjct: 230 AQSECRTLTQESCDVSPVLTQAMEALQDRPVLYKYTLDEFG-TARRSTVVRGFIDALTRG 288
Query: 114 SPGG 117
PGG
Sbjct: 289 GPGG 292
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.137 0.437
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,365,259
Number of Sequences: 539616
Number of extensions: 1632128
Number of successful extensions: 4208
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 4189
Number of HSP's gapped (non-prelim): 24
length of query: 131
length of database: 191,569,459
effective HSP length: 97
effective length of query: 34
effective length of database: 139,226,707
effective search space: 4733708038
effective search space used: 4733708038
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)