BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>047813
MERLNSKLYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLANGNSKAPNNIPDLNL
CSSSNTNPSNSSKP

High Scoring Gene Products

Symbol, full name Information P value
ZPR3
AT3G52770 		protein from Arabidopsis thaliana 1.2e-08

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  047813
        (74 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2083283 - symbol:ZPR3 "AT3G52770" species:3702...   130  1.2e-08   1


>TAIR|locus:2083283 [details] [associations]
            symbol:ZPR3 "AT3G52770" species:3702 "Arabidopsis
            thaliana" [GO:0005515 "protein binding" evidence=IPI] [GO:0009943
            "adaxial/abaxial axis specification" evidence=IMP] [GO:0010075
            "regulation of meristem growth" evidence=IMP] [GO:0010305 "leaf
            vascular tissue pattern formation" evidence=IMP] [GO:0010358 "leaf
            shaping" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0010073 "meristem maintenance" evidence=IGI] [GO:0043433
            "negative regulation of sequence-specific DNA binding transcription
            factor activity" evidence=IPI] [GO:0006914 "autophagy"
            evidence=RCA] [GO:0009062 "fatty acid catabolic process"
            evidence=RCA] GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0043433 GO:GO:0010305 GO:GO:0010075 GO:GO:0010358
            EMBL:AL353912 GO:GO:0009943 EMBL:AY065450 EMBL:AY123017
            IPI:IPI00521480 PIR:T49030 RefSeq:NP_190845.1 UniGene:At.28477
            STRING:Q9LXI8 EnsemblPlants:AT3G52770.1 GeneID:824443
            KEGG:ath:AT3G52770 TAIR:At3g52770 eggNOG:NOG327660
            HOGENOM:HOG000240780 InParanoid:Q9LXI8 OMA:VENCYIM
            ProtClustDB:CLSN2915550 Genevestigator:Q9LXI8 Uniprot:Q9LXI8
        Length = 67

 Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 29/54 (53%), Positives = 34/54 (62%)

Query:     1 MERLNSKLYLQNCYIMKENERLRKKXXXXXXXXXXXXXXXKQKLANGNSKAPNN 54
             MERLNSKL+++NCYIMKENERLRKK               KQKL+   +K  NN
Sbjct:     1 MERLNSKLFVENCYIMKENERLRKKAELLNQENQQLLFQLKQKLSK--TKNSNN 52


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.313   0.131   0.378    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       74        48   0.00091  102 3  11 23  0.40    27
                                                     29  0.36    26


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  381 (41 KB)
  Total size of DFA:  65 KB (2061 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  5.21u 0.16s 5.37t   Elapsed:  00:00:01
  Total cpu time:  5.21u 0.16s 5.37t   Elapsed:  00:00:01
  Start:  Thu May  9 19:28:38 2013   End:  Thu May  9 19:28:39 2013

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