Query 047816
Match_columns 620
No_of_seqs 364 out of 1457
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 05:25:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047816.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047816hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2x0b_A Renin; hydrolase-hormon 100.0 8.8E-56 3E-60 470.0 24.6 309 72-427 51-383 (383)
2 3psg_A Pepsinogen; hydrolase(a 100.0 7E-55 2.4E-59 462.1 24.6 308 73-427 47-370 (370)
3 1j71_A Candidapepsin, aspartic 100.0 1.9E-54 6.6E-59 453.5 27.4 310 72-437 3-334 (334)
4 1tzs_A Cathepsin E; hydrolase, 100.0 2.6E-54 8.9E-59 455.4 27.0 314 74-433 15-348 (351)
5 2apr_A Rhizopuspepsin; hydrola 100.0 8.1E-54 2.8E-58 446.9 29.5 300 82-427 13-324 (325)
6 3fv3_A SAPP1P-secreted asparti 100.0 5.1E-54 1.7E-58 451.4 27.9 311 73-437 4-339 (339)
7 3pvk_A Candidapepsin-2; hydrol 100.0 3.7E-54 1.3E-58 453.1 26.3 313 73-437 4-341 (342)
8 2qzx_A Candidapepsin-5; aspart 100.0 4.5E-54 1.5E-58 452.3 26.9 313 72-437 3-341 (342)
9 3cms_A Chymosin B; hydrolase, 100.0 5.7E-54 1.9E-58 447.8 25.0 305 73-427 5-323 (323)
10 4aa9_A Chymosin; hydrolase, as 100.0 7.4E-54 2.5E-58 446.6 24.5 297 83-427 10-320 (320)
11 3k1w_A Renin; protease, altern 100.0 6.6E-54 2.2E-58 451.0 24.1 311 72-427 8-340 (341)
12 1dpj_A Proteinase A; proteinas 100.0 3.9E-53 1.3E-57 442.8 29.6 305 73-427 4-329 (329)
13 1mpp_A Pepsin; hydrolase(acid 100.0 2.2E-53 7.5E-58 450.3 26.8 316 72-431 8-359 (361)
14 1am5_A Pepsin, acid proteinase 100.0 2.8E-53 9.6E-58 442.9 26.7 303 74-427 4-324 (324)
15 3vla_A EDGP; extracellular, in 100.0 9.7E-53 3.3E-57 451.3 30.9 340 71-428 8-400 (413)
16 3c9x_A Trichoderma reesei aspa 100.0 3.5E-53 1.2E-57 442.9 25.8 303 81-426 12-329 (329)
17 1oew_A Endothiapepsin; hydrola 100.0 5.9E-53 2E-57 441.2 26.1 302 81-426 12-329 (329)
18 1htr_B Gastricsin; aspartyl pr 100.0 6.8E-53 2.3E-57 440.9 26.3 300 82-427 10-329 (329)
19 1miq_A Plasmepsin; aspartic pr 100.0 6.8E-53 2.3E-57 447.7 24.9 304 73-427 53-374 (375)
20 3qvc_A Histo-aspartic protease 100.0 5.5E-53 1.9E-57 456.3 24.3 305 72-427 127-449 (451)
21 3lpj_A Beta-secretase 1; alzhe 100.0 3.9E-52 1.3E-56 453.6 30.3 325 83-432 73-425 (455)
22 1qdm_A Prophytepsin; aspartic 100.0 2.1E-52 7.1E-57 455.8 24.5 327 72-427 42-478 (478)
23 2bju_A Plasmepsin II; aspartic 100.0 1.6E-52 5.6E-57 452.0 22.5 305 72-427 128-450 (453)
24 1yg9_A Aspartic protease BLA G 100.0 1.2E-51 4.3E-56 431.2 24.5 294 83-427 16-329 (330)
25 2ewy_A Beta-secretase 2; BACE2 100.0 4.6E-51 1.6E-55 436.1 27.1 332 83-445 12-374 (383)
26 3aup_A SBG7S, BG, basic 7S glo 100.0 8E-51 2.7E-55 436.6 28.8 335 72-431 10-397 (403)
27 1ibq_A Aspergillopepsin; aspar 100.0 4.1E-51 1.4E-55 426.5 25.8 299 82-427 12-325 (325)
28 3vf3_A Beta-secretase 1; struc 100.0 1.9E-50 6.6E-55 433.9 31.8 322 83-432 27-379 (402)
29 2qp8_A Beta-secretase 1; BACE1 100.0 3.6E-50 1.2E-54 430.7 30.5 325 83-437 20-379 (395)
30 1izd_A Aspartic proteinase; su 100.0 2E-50 7E-55 420.7 26.0 296 82-427 13-323 (323)
31 1bxo_A Protein (penicillopepsi 100.0 1.6E-50 5.6E-55 421.6 22.2 296 82-427 13-323 (323)
32 1wkr_A Polyporopepsin; hydrola 100.0 6.3E-49 2.2E-53 412.7 27.6 300 73-431 4-337 (340)
33 1t6e_X Xylanase inhibitor; two 100.0 2.1E-47 7.2E-52 407.0 26.7 336 74-428 5-374 (381)
34 1b5f_A Protein (cardosin A); h 100.0 1.1E-39 3.6E-44 325.0 18.2 222 73-321 4-237 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 1.5E-35 5.1E-40 295.7 20.4 221 183-427 3-241 (241)
36 1lya_A Cathepsin D; lysosomal 99.8 5.1E-21 1.7E-25 161.5 9.6 89 73-179 4-96 (97)
37 1b5f_B Protein (cardosin A); h 99.6 3.4E-16 1.2E-20 129.5 7.6 82 336-427 2-87 (87)
38 2k1k_A Ephrin type-A receptor 97.3 0.00021 7.2E-09 47.8 4.2 35 575-611 3-38 (38)
39 2l2t_A Receptor tyrosine-prote 96.6 0.0023 7.9E-08 44.0 4.4 29 583-613 11-39 (44)
40 2ks1_B Epidermal growth factor 96.3 0.0036 1.2E-07 43.2 3.5 30 583-614 12-41 (44)
41 2jwa_A Receptor tyrosine-prote 95.0 0.043 1.5E-06 37.6 5.0 8 583-590 13-20 (44)
42 2i1a_A DNA damage-inducible pr 93.4 0.063 2.2E-06 47.9 4.4 30 83-114 24-53 (148)
43 2i1a_A DNA damage-inducible pr 90.6 0.92 3.1E-05 40.1 8.5 27 398-424 108-134 (148)
44 2k9y_A Ephrin type-A receptor 90.5 0.17 5.9E-06 34.3 2.7 10 602-611 31-40 (41)
45 3s8i_A Protein DDI1 homolog 1; 90.3 0.3 1E-05 43.5 5.0 30 397-426 106-135 (148)
46 2klu_A T-cell surface glycopro 88.2 0.49 1.7E-05 35.0 3.8 21 583-605 9-29 (70)
47 3s8i_A Protein DDI1 homolog 1; 86.5 0.45 1.5E-05 42.4 3.5 35 85-121 24-58 (148)
48 2l34_A TYRO protein tyrosine k 85.4 0.9 3.1E-05 29.1 3.5 28 580-609 4-32 (33)
49 1iij_A ERBB-2 receptor protein 84.4 0.37 1.3E-05 31.2 1.3 12 600-611 23-34 (35)
50 2hs1_A HIV-1 protease; ultra-h 77.8 2.6 8.8E-05 34.5 4.5 26 88-115 11-36 (99)
51 2knc_B Integrin beta-3; transm 77.0 1.9 6.6E-05 33.7 3.4 24 584-609 10-33 (79)
52 2l9u_A Receptor tyrosine-prote 76.6 3.9 0.00013 26.0 4.0 19 598-616 20-38 (40)
53 1fmb_A EIAV protease; hydrolas 76.1 2.5 8.7E-05 34.9 4.1 26 87-114 10-35 (104)
54 3ec0_A Protease; HIV-2, inhibi 73.7 3.9 0.00013 33.4 4.5 26 88-115 11-36 (99)
55 1s7q_A H-2KB, H-2 class I hist 71.6 0.81 2.8E-05 46.9 0.0 30 583-612 282-313 (348)
56 3liy_A Protease; hydrolase, hy 65.8 5.3 0.00018 33.4 3.7 30 88-117 13-45 (116)
57 2hah_A Protease, retropepsin; 64.5 5.8 0.0002 33.4 3.9 23 90-114 18-40 (116)
58 1afo_A Glycophorin A; integral 63.2 10 0.00036 24.8 3.9 29 583-612 11-39 (40)
59 2k9j_B Integrin beta-3; transm 60.2 9.8 0.00033 25.9 3.6 13 597-609 20-32 (43)
60 2l6w_A Beta-type platelet-deri 63.7 2 6.7E-05 28.3 0.0 22 593-614 17-38 (39)
61 3sqf_A Protease; folded monome 58.1 9.2 0.00032 32.0 3.9 28 87-116 11-38 (114)
62 2l2t_A Receptor tyrosine-prote 53.7 22 0.00074 24.3 4.4 33 584-618 9-41 (44)
63 3slz_A GAG-Pro-POL polyprotein 52.4 15 0.00053 31.6 4.6 27 87-115 24-50 (132)
64 2ks1_B Epidermal growth factor 48.8 11 0.00039 25.7 2.5 32 584-617 10-41 (44)
65 2rsp_A RSV protease; hydrolase 43.2 23 0.00078 30.1 4.1 25 90-116 25-49 (124)
66 3ka2_A [L-Ala51;Gly51']HIV-1 p 42.2 20 0.00069 33.2 3.9 26 87-114 10-35 (203)
67 2jo1_A Phospholemman; FXYD1, N 40.1 56 0.0019 24.5 5.2 18 583-601 17-34 (72)
68 2l8s_A Integrin alpha-1; trans 37.3 50 0.0017 23.5 4.4 6 606-611 35-40 (54)
69 1q90_G Cytochrome B6F complex 36.6 50 0.0017 21.3 3.8 30 583-615 5-34 (37)
70 2k9p_A Pheromone alpha factor 35.2 34 0.0012 26.6 3.6 29 583-612 19-47 (80)
71 1lya_A Cathepsin D; lysosomal 33.2 32 0.0011 27.7 3.3 18 296-313 29-46 (97)
72 2jp3_A FXYD domain-containing 32.4 54 0.0019 24.3 4.0 16 583-599 18-33 (67)
73 2lx0_A Membrane fusion protein 29.4 79 0.0027 18.9 3.6 23 584-608 5-27 (32)
74 2knc_A Integrin alpha-IIB; tra 28.7 90 0.0031 22.2 4.6 7 606-612 38-44 (54)
75 2jwa_A Receptor tyrosine-prote 28.5 81 0.0028 21.4 4.1 31 584-614 11-41 (44)
76 2llm_A Amyloid beta A4 protein 32.0 14 0.00049 24.8 0.0 10 581-590 15-25 (43)
77 2k1k_A Ephrin type-A receptor 24.8 95 0.0032 20.3 3.8 28 585-613 10-37 (38)
78 2l8s_A Integrin alpha-1; trans 24.1 73 0.0025 22.7 3.4 13 597-609 20-32 (54)
79 2zxe_G FXYD10, phospholemman-l 23.4 63 0.0022 24.4 3.1 8 583-590 20-27 (74)
80 3ka2_A [L-Ala51;Gly51']HIV-1 p 23.1 83 0.0029 29.1 4.6 26 87-114 114-139 (203)
81 1q55_A EP-cadherin, C-cadherin 22.5 18 0.00062 41.7 0.0 14 577-590 699-713 (880)
82 1vf5_G Protein PET G; photosyn 22.1 50 0.0017 21.3 1.9 23 583-606 5-27 (37)
83 2jp3_A FXYD domain-containing 22.0 53 0.0018 24.4 2.4 24 586-610 16-39 (67)
84 2lp1_A C99; alzheimer'S D memb 27.2 19 0.00067 29.7 0.0 8 583-590 31-38 (122)
85 2lk9_A Bone marrow stromal ant 21.4 98 0.0034 19.6 3.1 10 601-610 22-31 (35)
86 2knc_A Integrin alpha-IIB; tra 20.8 92 0.0032 22.2 3.4 13 597-609 23-35 (54)
No 1
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=8.8e-56 Score=469.95 Aligned_cols=309 Identities=26% Similarity=0.478 Sum_probs=256.7
Q ss_pred eeeeeccCCccceeEEEEEEecCCCcEEEEEEeCCCCceeEeCCCCC----CCCCCCCCCCCCCCCcccccccCcCCccc
Q 047816 72 ARMRLYDDLLLNGYYTTRLWIGTPPQTFALIVDTGSTVTYVPCATCE----HCGDHQDPKFEPDLSSTYQPVKCNLYCNC 147 (620)
Q Consensus 72 ~~~~l~~~~~~~~~Y~~~i~iGTP~Q~~~v~vDTGSs~~WV~~~~c~----~C~~~~~~~y~p~~SsT~~~~~c~~~c~c 147 (620)
...++.+. .+.+|+++|+||||+|+|.|++||||+++||+|..|. .|..+ +.|||++|+||+..+
T Consensus 51 ~~~~l~n~--~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C~~~--~~y~~~~SsT~~~~~------- 119 (383)
T 2x0b_A 51 SSVILTNY--MDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYH--KLFDASDSSSYKHNG------- 119 (383)
T ss_dssp CEEEEEEE--TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHHHTS--CCBCGGGCTTCEEEE-------
T ss_pred ceEeeeec--CCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCCCcccccCC--CCCCCCCCCcEEECC-------
Confidence 34666653 3678999999999999999999999999999999996 69876 799999999999976
Q ss_pred CCCCCcceeEEeeccCCceeEEEEEEEEEeCCCCCCCccceEEEEEEeccCC-CcCCCcceEEecCCCCC------chHH
Q 047816 148 DRERAQCVYERKYAEMSSSSGVLGEDIISFGNESDLKPQRAVFGCENVETGD-LYSQHADGIIGLGRGDL------SVVD 220 (620)
Q Consensus 148 ~~~~~~~~~~~~Y~dg~~~~G~~~~D~v~lg~~~~~~~~~~~fg~~~~~~~~-~~~~~~dGIlGLg~~~~------s~~~ 220 (620)
|.|.++|++| ++.|.+++|+|++|+ +.++ +.|||+..+.+. +....+|||||||++.+ ++++
T Consensus 120 ------~~~~i~Yg~G-s~~G~~~~Dtv~ig~---~~v~-~~Fg~a~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~ 188 (383)
T 2x0b_A 120 ------TELTLRYSTG-TVSGFLSQDIITVGG---ITVT-QMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFD 188 (383)
T ss_dssp ------EEEEEECSSC-EEEEEEEEEEEEETT---EEEE-EEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCHHH
T ss_pred ------cEEEEEcCCc-cEEEEEEeeEEEEcC---ceEE-EEEEEEEecCCcccccCCCceEeccCCCccccCCCCcHHH
Confidence 6899999995 589999999999998 6778 999999987553 33457899999999765 4899
Q ss_pred HHHHcCCcc-cceEEeecCCCCC----CceEEECCCCCCCC---ceEeecCCCCCCeeEEEEeEEEEccEEecCCCCccC
Q 047816 221 QLVEKGVIS-DSFSLCYGGMDVG----GGAMVLGGISPPKD---MVFTHSDPVRSPYYNIDLKVIHVAGKPLPLNPKVFD 292 (620)
Q Consensus 221 ~L~~~g~I~-~~FSl~l~~~~~~----~G~l~fGgiD~~~~---~~~~~~~~~~~~~w~v~l~~i~v~g~~~~~~~~~~~ 292 (620)
+|++||+|+ ++||+||++.... +|.|+|||+|++++ +.|+++ ....+|.|.+++|.|+++.+. ..
T Consensus 189 ~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv--~~~~~w~v~l~~i~v~~~~~~-----~~ 261 (383)
T 2x0b_A 189 NIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINL--IKTGVWQIQMKGVSVGSSTLL-----CE 261 (383)
T ss_dssp HHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEB--SSTTSCEEEECEEEESSCCCB-----ST
T ss_pred HHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEc--CCCceEEEEEeEEEeCCceEE-----cC
Confidence 999999998 8999999986433 79999999999873 344444 456899999999999987642 13
Q ss_pred CCCceEeeccceeeeecHHHHHHHHHHHHHHhhhcccccCCCCCCccccccCCCCCccccCCCCCeEEEEECCCcEEEeC
Q 047816 293 GKHGTVLDSGTTYAYLPEAAFLAFKDAIMSELQSLKQIRGPDPNYNDICFSGAPSDVSQLSDTFPAVEMAFGNGQKLLLA 372 (620)
Q Consensus 293 ~~~~ailDSGtt~~~LP~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~ 372 (620)
.+..+++||||+++++|.+++++|.+++++.. ..+.|.++|+.. +.+|+|+|+| +|.+|+||
T Consensus 262 ~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~--------~~g~~~v~C~~~---------~~~P~i~f~~-~g~~~~l~ 323 (383)
T 2x0b_A 262 DGCLALVDTGASYISGSTSSIEKLMEALGAKK--------RLFDYVVKCNEG---------PTLPDISFHL-GGKEYTLT 323 (383)
T ss_dssp TCEEEEECTTCSSEEECHHHHHHHHHHHTCEE--------CSSCEEEEGGGT---------TTCCCEEEEE-TTEEEEEC
T ss_pred CCcEEEEcCCCceEEcCHHHHHHHHHHhCCcc--------cCCcEEEecccc---------ccCceEEEEE-CCEEEEEC
Confidence 45689999999999999999999999985432 234567789531 5789999999 89999999
Q ss_pred CCCcEEEecccCCeEEEEEEecC-----CCCceeehHhhhceEEEEEeCCCCEEEEEecC
Q 047816 373 PENYLFRHSKVRGAYCLGIFQNG-----RDPTTLLGGIIVRNTLVMYDREHSKIGFWKTN 427 (620)
Q Consensus 373 ~~~yi~~~~~~~~~~Cl~~~~~~-----~~~~~ILG~~fLr~~yvvfD~en~rIGfA~~~ 427 (620)
+++|+++....++..|+..+... .++.||||+.|||++|+|||++|+|||||+++
T Consensus 324 ~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~a~ 383 (383)
T 2x0b_A 324 SADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 383 (383)
T ss_dssp HHHHBCCCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred HHHhEeeccCCCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeEEEcC
Confidence 99999876543456898544332 34689999999999999999999999999874
No 2
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=7e-55 Score=462.11 Aligned_cols=308 Identities=28% Similarity=0.496 Sum_probs=252.3
Q ss_pred eeeeccCCccceeEEEEEEecCCCcEEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCcccccccCcCCcccCCCCC
Q 047816 73 RMRLYDDLLLNGYYTTRLWIGTPPQTFALIVDTGSTVTYVPCATCEHCGDHQDPKFEPDLSSTYQPVKCNLYCNCDRERA 152 (620)
Q Consensus 73 ~~~l~~~~~~~~~Y~~~i~iGTP~Q~~~v~vDTGSs~~WV~~~~c~~C~~~~~~~y~p~~SsT~~~~~c~~~c~c~~~~~ 152 (620)
..+|.+.. |.+|+++|+||||||+|.|++||||+++||+|..|..|....++.|+|++|+||+..+
T Consensus 47 ~~~l~n~~--d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~~C~~~~~y~~~~SsT~~~~~------------ 112 (370)
T 3psg_A 47 DEPLENYL--DTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSDHNQFNPDDSSTFEATS------------ 112 (370)
T ss_dssp CCTTGGGT--TCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCEEEE------------
T ss_pred eecceecc--CCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCcccCCCCCCCCccCcCcEECC------------
Confidence 34555543 6789999999999999999999999999999999985433334899999999999976
Q ss_pred cceeEEeeccCCceeEEEEEEEEEeCCCCCCCccceEEEEEEeccCC-CcCCCcceEEecCCCCC------chHHHHHHc
Q 047816 153 QCVYERKYAEMSSSSGVLGEDIISFGNESDLKPQRAVFGCENVETGD-LYSQHADGIIGLGRGDL------SVVDQLVEK 225 (620)
Q Consensus 153 ~~~~~~~Y~dg~~~~G~~~~D~v~lg~~~~~~~~~~~fg~~~~~~~~-~~~~~~dGIlGLg~~~~------s~~~~L~~~ 225 (620)
+.|.+.|++| ++.|.+++|+|++|+ +.+.++.|||+....+. +....+|||||||++.. +++++|++|
T Consensus 113 -~~~~i~Yg~G-s~~G~~~~Dtv~ig~---~~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~q 187 (370)
T 3psg_A 113 -QELSITYGTG-SMTGILGYDTVQVGG---ISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGATPVFDNLWDQ 187 (370)
T ss_dssp -EEEEEESSSC-EEEEEEEEEEEEETT---EEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGGCCCHHHHHHHT
T ss_pred -cEEEEEeCCc-eEEEEEEEEEEeeCC---cccCCeEEEEEEeecccccccCCccceeccCCccccccCCCCHHHHHHHC
Confidence 6899999995 589999999999998 78899999999887654 34456899999999764 589999999
Q ss_pred CCcc-cceEEeecCCCCCCceEEECCCCCCC---CceEeecCCCCCCeeEEEEeEEEEccEEecCCCCccCCCCceEeec
Q 047816 226 GVIS-DSFSLCYGGMDVGGGAMVLGGISPPK---DMVFTHSDPVRSPYYNIDLKVIHVAGKPLPLNPKVFDGKHGTVLDS 301 (620)
Q Consensus 226 g~I~-~~FSl~l~~~~~~~G~l~fGgiD~~~---~~~~~~~~~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~~ailDS 301 (620)
|+|+ +.||+||++....+|.|+|||+|+++ .+.|+++ ....+|.|.+++|+|+++.+.. ..+..+++||
T Consensus 188 g~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv--~~~~~w~v~l~~i~v~g~~~~~-----~~~~~aiiDT 260 (370)
T 3psg_A 188 GLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPV--SVEGYWQITLDSITMDGETIAC-----SGGCQAIVDT 260 (370)
T ss_dssp TCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEEC--SEETTEEEEECEEESSSSEEEC-----TTCEEEEECT
T ss_pred CCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeecc--cccceeEEEEeEEEECCEEEec-----CCCceEEEcC
Confidence 9998 89999999865568999999999987 3455544 3568999999999999987652 3456899999
Q ss_pred cceeeeecHHHHHHHHHHHHHHhhhcccccCCCCCCccccccCCCCCccccCCCCCeEEEEECCCcEEEeCCCCcEEEec
Q 047816 302 GTTYAYLPEAAFLAFKDAIMSELQSLKQIRGPDPNYNDICFSGAPSDVSQLSDTFPAVEMAFGNGQKLLLAPENYLFRHS 381 (620)
Q Consensus 302 Gtt~~~LP~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~~~~yi~~~~ 381 (620)
||+++++|.+++++|.+++++.. ...+.|.++|.. .+.+|+|+|+| +|.+|+||+++|+++ .
T Consensus 261 GTs~~~lP~~~~~~i~~~i~a~~-------~~~g~~~v~C~~---------~~~lP~i~f~~-~g~~~~l~~~~yi~~-~ 322 (370)
T 3psg_A 261 GTSLLTGPTSAIANIQSDIGASE-------NSDGEMVISCSS---------IDSLPDIVFTI-DGVQYPLSPSAYILQ-D 322 (370)
T ss_dssp TCCSEEEEHHHHHHHHHHTTCEE-------CTTCCEECCGGG---------GGGCCCEEEEE-TTEEEEECHHHHEEE-C
T ss_pred CCCcEECCHHHHHHHHHHhCCcc-------cCCCcEEEECCC---------cccCCcEEEEE-CCEEEEECHHHhccc-C
Confidence 99999999999999999886542 133457788842 25789999999 899999999999998 2
Q ss_pred ccCCeEEEEEEecC-----CCCceeehHhhhceEEEEEeCCCCEEEEEecC
Q 047816 382 KVRGAYCLGIFQNG-----RDPTTLLGGIIVRNTLVMYDREHSKIGFWKTN 427 (620)
Q Consensus 382 ~~~~~~Cl~~~~~~-----~~~~~ILG~~fLr~~yvvfD~en~rIGfA~~~ 427 (620)
...|+..+... .++.||||++|||++|+|||++|+|||||+++
T Consensus 323 ---~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 323 ---DDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp ---SSCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred ---CCEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence 34697654432 12369999999999999999999999999974
No 3
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=1.9e-54 Score=453.48 Aligned_cols=310 Identities=22% Similarity=0.399 Sum_probs=258.1
Q ss_pred eeeeeccCCccceeEEEEEEecCCCcEEEEEEeCCCCceeEeCC--CCC---------CCCCCCCCCCCCCCCccccccc
Q 047816 72 ARMRLYDDLLLNGYYTTRLWIGTPPQTFALIVDTGSTVTYVPCA--TCE---------HCGDHQDPKFEPDLSSTYQPVK 140 (620)
Q Consensus 72 ~~~~l~~~~~~~~~Y~~~i~iGTP~Q~~~v~vDTGSs~~WV~~~--~c~---------~C~~~~~~~y~p~~SsT~~~~~ 140 (620)
..+++.++ +++|+++|.||||+|++.|++||||+++||+|. .|. .|..+ +.|+|++|+||+..+
T Consensus 3 ~~~~l~~~---~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~--~~y~~~~SsT~~~~~ 77 (334)
T 1j71_A 3 VPTTLINE---GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQE--GTFDPSSSSSAQNLN 77 (334)
T ss_dssp EEEEEEEC---SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSS--CCBCGGGCTTCEEEE
T ss_pred eeEEEecC---CcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCC--CcCCcccCCCcccCC
Confidence 34566654 568999999999999999999999999999865 575 35544 799999999999876
Q ss_pred CcCCcccCCCCCcceeEEeeccCCceeEEEEEEEEEeCCCCCCCccceEEEEEEeccCCCcCCCcceEEecCCCCC----
Q 047816 141 CNLYCNCDRERAQCVYERKYAEMSSSSGVLGEDIISFGNESDLKPQRAVFGCENVETGDLYSQHADGIIGLGRGDL---- 216 (620)
Q Consensus 141 c~~~c~c~~~~~~~~~~~~Y~dg~~~~G~~~~D~v~lg~~~~~~~~~~~fg~~~~~~~~~~~~~~dGIlGLg~~~~---- 216 (620)
|.|.+.|++|+.+.|.+++|+|++|+ +++.++.|||+.... ..+||||||++..
T Consensus 78 -------------~~~~i~Yg~Gs~~~G~~~~D~v~~g~---~~~~~~~fg~~~~~~------~~~GilGLg~~~~~~~~ 135 (334)
T 1j71_A 78 -------------QDFSIEYGDLTSSQGSFYKDTVGFGG---ISIKNQQFADVTTTS------VDQGIMGIGFTADEAGY 135 (334)
T ss_dssp -------------EEEEEEBTTSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEES------SSSCEEECSCGGGSSTT
T ss_pred -------------CceEEEECCCCEEEEEEEEEEEEECC---EEEccEEEEEEEecC------CCccEEEEcCCcccCcc
Confidence 68999999988889999999999998 678999999998763 4799999999764
Q ss_pred ----chHHHHHHcCCcc-cceEEeecCCCCCCceEEECCCCCCCCc-eEeecCCCCCCeeEEEEeEEEEccEEecCCCCc
Q 047816 217 ----SVVDQLVEKGVIS-DSFSLCYGGMDVGGGAMVLGGISPPKDM-VFTHSDPVRSPYYNIDLKVIHVAGKPLPLNPKV 290 (620)
Q Consensus 217 ----s~~~~L~~~g~I~-~~FSl~l~~~~~~~G~l~fGgiD~~~~~-~~~~~~~~~~~~w~v~l~~i~v~g~~~~~~~~~ 290 (620)
+++++|++||+|+ ++||+||++.+...|.|+|||+|++++. ...+.+.....+|.|.+++|.|+++.+..
T Consensus 136 ~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~---- 211 (334)
T 1j71_A 136 NLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVTSSVELRVHLGSINFDGTSVST---- 211 (334)
T ss_dssp CCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECCCSSSCEEEEEEEEETTEEEEE----
T ss_pred ccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEccCCCeEEEEEeEEEECCEeccC----
Confidence 7999999999998 8999999976566899999999999843 22233333556999999999999987752
Q ss_pred cCCCCceEeeccceeeeecHHHHHHHHHHHHHHhhhcccccCCCCCCc-cccccCCCCCccccCCCCCeEEEEECCCcEE
Q 047816 291 FDGKHGTVLDSGTTYAYLPEAAFLAFKDAIMSELQSLKQIRGPDPNYN-DICFSGAPSDVSQLSDTFPAVEMAFGNGQKL 369 (620)
Q Consensus 291 ~~~~~~ailDSGtt~~~LP~~~~~~i~~~l~~~~~~~~~~~~~~~~~~-~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~ 369 (620)
...++|||||++++||++++++|++++.+++. .....|. .+| ..+|+|+|+|.+|.++
T Consensus 212 ---~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~------~~~~~~~~~~C------------~~~p~i~f~f~~g~~~ 270 (334)
T 1j71_A 212 ---NADVVLDSGTTITYFSQSTADKFARIVGATWD------SRNEIYRLPSC------------DLSGDAVFNFDQGVKI 270 (334)
T ss_dssp ---EEEEEECTTCSSEEECHHHHHHHHHHHTCEEE------TTTTEEECSSS------------CCCSEEEEEESTTCEE
T ss_pred ---CccEEEeCCCCcEecCHHHHHHHHHHcCCccc------CCCceEEEEcC------------CCCCceEEEEcCCcEE
Confidence 34799999999999999999999999976542 1223555 788 3479999999778999
Q ss_pred EeCCCCcEEEecccCCeEEEEEEecCCCCceeehHhhhceEEEEEeCCCCEEEEEecCCccccccccc
Q 047816 370 LLAPENYLFRHSKVRGAYCLGIFQNGRDPTTLLGGIIVRNTLVMYDREHSKIGFWKTNCSELWERLHI 437 (620)
Q Consensus 370 ~l~~~~yi~~~~~~~~~~Cl~~~~~~~~~~~ILG~~fLr~~yvvfD~en~rIGfA~~~c~~~~~~~~~ 437 (620)
+||+++|+++..+ +..|+..++.. +.||||+.|||++|+|||++++|||||+++|+...++++|
T Consensus 271 ~i~~~~y~~~~~~--~~~C~~~i~~~--~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~~~i~~i 334 (334)
T 1j71_A 271 TVPLSELILKDSD--SSICYFGISRN--DANILGDNFLRRAYIVYDLDDKTISLAQVKYTSSSDISAL 334 (334)
T ss_dssp EEEGGGGEEECSS--SSCEEESEEEC--TTCEECHHHHTTEEEEEETTTTEEEEEEECCCSCCCEEEC
T ss_pred EECHHHheeecCC--CCeeEEEEeEC--CCcEEChHhhccEEEEEECCCCEEEEEecCCCCccceEEC
Confidence 9999999998643 34598766654 4699999999999999999999999999999976666653
No 4
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=2.6e-54 Score=455.44 Aligned_cols=314 Identities=26% Similarity=0.463 Sum_probs=253.3
Q ss_pred eeeccCCccceeEEEEEEecCCCcEEEEEEeCCCCceeEeCCCCC--CCCCCCCCCCCCCCCcccccccCcCCcccCCCC
Q 047816 74 MRLYDDLLLNGYYTTRLWIGTPPQTFALIVDTGSTVTYVPCATCE--HCGDHQDPKFEPDLSSTYQPVKCNLYCNCDRER 151 (620)
Q Consensus 74 ~~l~~~~~~~~~Y~~~i~iGTP~Q~~~v~vDTGSs~~WV~~~~c~--~C~~~~~~~y~p~~SsT~~~~~c~~~c~c~~~~ 151 (620)
+++.+ ..+++|+++|.||||+|++.|++||||+++||+|..|. .|..+ +.|+|++|+||+..+
T Consensus 15 ~~l~n--~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~--~~y~~~~SsT~~~~~----------- 79 (351)
T 1tzs_A 15 EPLIN--YLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACKTH--SRFQPSQSSTYSQPG----------- 79 (351)
T ss_dssp CTTGG--GSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTS--CCBCGGGCTTCBCCS-----------
T ss_pred eecee--cCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCccccCCC--CcCCcccCcceEECC-----------
Confidence 44544 23668999999999999999999999999999999997 78765 799999999999876
Q ss_pred CcceeEEeeccCCceeEEEEEEEEEeCCCCCCCccceEEEEEEeccCC-CcCCCcceEEecCCCCC------chHHHHHH
Q 047816 152 AQCVYERKYAEMSSSSGVLGEDIISFGNESDLKPQRAVFGCENVETGD-LYSQHADGIIGLGRGDL------SVVDQLVE 224 (620)
Q Consensus 152 ~~~~~~~~Y~dg~~~~G~~~~D~v~lg~~~~~~~~~~~fg~~~~~~~~-~~~~~~dGIlGLg~~~~------s~~~~L~~ 224 (620)
|.|.+.|++| ++.|.+++|+|++|+ +++.++.|||+....+. +.....+||||||++.. +++++|++
T Consensus 80 --~~~~i~Yg~G-s~~G~~~~D~v~ig~---~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~ 153 (351)
T 1tzs_A 80 --QSFSIQYGTG-SLSGIIGADQVSVEG---LTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFDNMMA 153 (351)
T ss_dssp --CEEEEESSSC-EEEEEEEEEEEEETT---EEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGGGCCCHHHHHHH
T ss_pred --CEEEEEeCCC-CeEEEEEEeEEEECC---eEECCeEEEEEEeccccccccCCCceEEecCCccccccCCCcHHHHHHH
Confidence 6899999995 589999999999998 67889999999887654 33456899999999764 48999999
Q ss_pred cCCcc-cceEEeecCCCCC--CceEEECCCCCCC---CceEeecCCCCCCeeEEEEeEEEEccEEecCCCCccCCCCceE
Q 047816 225 KGVIS-DSFSLCYGGMDVG--GGAMVLGGISPPK---DMVFTHSDPVRSPYYNIDLKVIHVAGKPLPLNPKVFDGKHGTV 298 (620)
Q Consensus 225 ~g~I~-~~FSl~l~~~~~~--~G~l~fGgiD~~~---~~~~~~~~~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~~ai 298 (620)
||+|. ++||+||++.... +|.|+|||+|+++ .+.|+++. ...+|.|.+++|+|+++.+.. .....++
T Consensus 154 qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~--~~~~~~v~l~~i~v~~~~~~~-----~~~~~ai 226 (351)
T 1tzs_A 154 QNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVT--KQAYWQIALDNIQVGGTVMFC-----SEGCQAI 226 (351)
T ss_dssp TTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECS--EETTEEEEEEEEEETTEEEEC-----TTCEEEE
T ss_pred CCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecC--CCceEEEEeCEEEECCceEEc-----CCCceEE
Confidence 99998 8999999986433 7999999999987 34555543 467999999999999987531 2346799
Q ss_pred eeccceeeeecHHHHHHHHHHHHHHhhhcccccCCCCCCccccccCCCCCccccCCCCCeEEEEECCCcEEEeCCCCcEE
Q 047816 299 LDSGTTYAYLPEAAFLAFKDAIMSELQSLKQIRGPDPNYNDICFSGAPSDVSQLSDTFPAVEMAFGNGQKLLLAPENYLF 378 (620)
Q Consensus 299 lDSGtt~~~LP~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~~~~yi~ 378 (620)
|||||++++||++++++|.+++++... . +.|.++|+.. +.+|+|+|+| +|.+++||+++|++
T Consensus 227 iDSGTs~~~lP~~~~~~l~~~~~~~~~-------~-g~~~~~C~~~---------~~~P~i~f~f-~g~~~~i~~~~yi~ 288 (351)
T 1tzs_A 227 VDTGTSLITGPSDKIKQLQNAIGAAPV-------D-GEYAVECANL---------NVMPDVTFTI-NGVPYTLSPTAYTL 288 (351)
T ss_dssp ECTTCSSEEECHHHHHHHHHHHTCEEC-------S-SSEEECGGGG---------GGSCCEEEEE-TTEEEEECTTTSEE
T ss_pred eccCCcceeCCHHHHHHHHHHhCCccc-------C-CeEEEeCCCC---------ccCCcEEEEE-CCEEEEECHHHhEe
Confidence 999999999999999999999855321 1 4567788531 4689999999 88999999999998
Q ss_pred EecccCCeEEEEEEecC-----CCCceeehHhhhceEEEEEeCCCCEEEEEecCCccccc
Q 047816 379 RHSKVRGAYCLGIFQNG-----RDPTTLLGGIIVRNTLVMYDREHSKIGFWKTNCSELWE 433 (620)
Q Consensus 379 ~~~~~~~~~Cl~~~~~~-----~~~~~ILG~~fLr~~yvvfD~en~rIGfA~~~c~~~~~ 433 (620)
+....++..|+..+... ..+.||||+.|||++|+|||++++|||||+++|.+..+
T Consensus 289 ~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~~~s~~~ 348 (351)
T 1tzs_A 289 LDFVDGMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAVPWSHPQ 348 (351)
T ss_dssp CC-----CCEEESEEECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC------
T ss_pred eccCCCCCeEEEEEEECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECCcccchh
Confidence 76533346898544432 34689999999999999999999999999999986433
No 5
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=8.1e-54 Score=446.92 Aligned_cols=300 Identities=25% Similarity=0.451 Sum_probs=252.8
Q ss_pred cceeEEEEEEecCCCcEEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCcccccccCcCCcccCCCCCcceeEEeec
Q 047816 82 LNGYYTTRLWIGTPPQTFALIVDTGSTVTYVPCATCEHCGDHQDPKFEPDLSSTYQPVKCNLYCNCDRERAQCVYERKYA 161 (620)
Q Consensus 82 ~~~~Y~~~i~iGTP~Q~~~v~vDTGSs~~WV~~~~c~~C~~~~~~~y~p~~SsT~~~~~c~~~c~c~~~~~~~~~~~~Y~ 161 (620)
.+++|+++|.||||+|++.|++||||+++||+|..|..| .+.++.|+|++|+||+..+ |.|.+.|+
T Consensus 13 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c-~~~~~~y~~~~SsT~~~~~-------------~~~~i~Yg 78 (325)
T 2apr_A 13 NDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC-GSGQTKYDPNQSSTYQADG-------------RTWSISYG 78 (325)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC-CTTSCCBCGGGCTTCEEEE-------------EEEEEECT
T ss_pred CCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH-hcCCCCCCcccCCCeeeCC-------------CEEEEEEC
Confidence 467899999999999999999999999999999999998 5556899999999999865 68999999
Q ss_pred cCCceeEEEEEEEEEeCCCCCCCccceEEEEEEeccCCCcCCCcceEEecCCCCC-------chHHHHHHcCCcc-cceE
Q 047816 162 EMSSSSGVLGEDIISFGNESDLKPQRAVFGCENVETGDLYSQHADGIIGLGRGDL-------SVVDQLVEKGVIS-DSFS 233 (620)
Q Consensus 162 dg~~~~G~~~~D~v~lg~~~~~~~~~~~fg~~~~~~~~~~~~~~dGIlGLg~~~~-------s~~~~L~~~g~I~-~~FS 233 (620)
+|+.+.|.+++|+|++++ ++++++.|||+...++.+.....+||||||++.. +++++|++||+|. +.||
T Consensus 79 ~Gs~~~G~~~~D~v~~g~---~~v~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i~~~~FS 155 (325)
T 2apr_A 79 DGSSASGILAKDNVNLGG---LLIKGQTIELAKREAASFASGPNDGLLGLGFDTITTVRGVKTPMDNLISQGLISRPIFG 155 (325)
T ss_dssp TSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEECHHHHTSSCSEEEECSCGGGCSSTTCCCHHHHHHHTTSCSSSEEE
T ss_pred CCCCEEEEEEEEEEEECC---EEECcEEEEEEeccCcccccCCCceEEEeCCcccccccCCCCHHHHHHhcCCCCCceEE
Confidence 987899999999999998 6788999999998765555555899999998754 5899999999997 8999
Q ss_pred EeecCC-CCCCceEEECCCCCCC---CceEeecCCCCCCeeEEEEeEEEEccEEecCCCCccCCCCceEeeccceeeeec
Q 047816 234 LCYGGM-DVGGGAMVLGGISPPK---DMVFTHSDPVRSPYYNIDLKVIHVAGKPLPLNPKVFDGKHGTVLDSGTTYAYLP 309 (620)
Q Consensus 234 l~l~~~-~~~~G~l~fGgiD~~~---~~~~~~~~~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~~ailDSGtt~~~LP 309 (620)
+||++. ....|.|+|||+|+++ .+.|+++.. ...+|.|.+++|+|+++ +. ..+..++|||||++++||
T Consensus 156 ~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~-~~~~~~v~l~~i~vg~~-~~------~~~~~~iiDSGTs~~~lP 227 (325)
T 2apr_A 156 VYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDN-SRGWWGITVDRATVGTS-TV------ASSFDGILDTGTTLLILP 227 (325)
T ss_dssp EEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBC-TTSSCEEEECEEEETTE-EE------ECCEEEEECTTCSSEEEE
T ss_pred EEecCCCCCCCCEEEEccCCchhccCceEEEEccC-CCCEEEEEEeEEEECCE-ec------CCCceEEEecCCccEECC
Confidence 999753 3467999999999987 456666543 46799999999999983 32 234589999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcccccCCCCCCccccccCCCCCccccCCCCCeEEEEECCCcEEEeCCCCcEEEecccCCeEEE
Q 047816 310 EAAFLAFKDAIMSELQSLKQIRGPDPNYNDICFSGAPSDVSQLSDTFPAVEMAFGNGQKLLLAPENYLFRHSKVRGAYCL 389 (620)
Q Consensus 310 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~~~~yi~~~~~~~~~~Cl 389 (620)
+++++++.+++.+.+. +. +.|..+|+. ..+|+|+|+| +|.++.||+++|+++.. +..|+
T Consensus 228 ~~~~~~~~~~~~~~~~------~~-g~~~~~C~~----------~~~p~i~f~f-~g~~~~ip~~~~~~~~~---~~~C~ 286 (325)
T 2apr_A 228 NNIAASVARAYGASDN------GD-GTYTISCDT----------SAFKPLVFSI-NGASFQVSPDSLVFEEF---QGQCI 286 (325)
T ss_dssp HHHHHHHHHHHTCEEC------SS-SCEEECSCG----------GGCCCEEEEE-TTEEEEECGGGGEEEEE---TTEEE
T ss_pred HHHHHHHHHHHhcccC------CC-CeEEEECCC----------CCCCcEEEEE-CCEEEEECHHHEEEcCC---CCeEE
Confidence 9999999999865532 12 456778841 3489999999 56699999999998654 56898
Q ss_pred EEEecCCCCceeehHhhhceEEEEEeCCCCEEEEEecC
Q 047816 390 GIFQNGRDPTTLLGGIIVRNTLVMYDREHSKIGFWKTN 427 (620)
Q Consensus 390 ~~~~~~~~~~~ILG~~fLr~~yvvfD~en~rIGfA~~~ 427 (620)
+.++..+++.||||+.|||++|+|||++|+|||||+++
T Consensus 287 ~~i~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 287 AGFGYGNWGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp ESEEEESSSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred EEEEcCCCCCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 76654446789999999999999999999999999874
No 6
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=5.1e-54 Score=451.45 Aligned_cols=311 Identities=23% Similarity=0.421 Sum_probs=259.3
Q ss_pred eeeeccCCccceeEEEEEEecCCCcEEEEEEeCCCCceeEe-----CCCCCCCCCCCCCCCCCCCCcccccccCcCCccc
Q 047816 73 RMRLYDDLLLNGYYTTRLWIGTPPQTFALIVDTGSTVTYVP-----CATCEHCGDHQDPKFEPDLSSTYQPVKCNLYCNC 147 (620)
Q Consensus 73 ~~~l~~~~~~~~~Y~~~i~iGTP~Q~~~v~vDTGSs~~WV~-----~~~c~~C~~~~~~~y~p~~SsT~~~~~c~~~c~c 147 (620)
.+++.++ +++|+++|.||||+|++.|++||||+++||+ |..|..|..+ +.|+|++|+||+..+
T Consensus 4 ~~~l~~~---~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~~~--~~y~~~~SsT~~~~~------- 71 (339)
T 3fv3_A 4 SLSLINE---GPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKSS--GTFTPSSSSSYKNLG------- 71 (339)
T ss_dssp EEEEEEC---SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTTTT--CCBCGGGCTTCEEEE-------
T ss_pred eeEEEcC---CCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCCCC--CcCCCccCcceeeCC-------
Confidence 4556544 4579999999999999999999999999998 5555678765 799999999999986
Q ss_pred CCCCCcceeEEeeccCCceeEEEEEEEEEeCCCCCCCccceEEEEEEeccCCCcCCCcceEEecCCCCC-----------
Q 047816 148 DRERAQCVYERKYAEMSSSSGVLGEDIISFGNESDLKPQRAVFGCENVETGDLYSQHADGIIGLGRGDL----------- 216 (620)
Q Consensus 148 ~~~~~~~~~~~~Y~dg~~~~G~~~~D~v~lg~~~~~~~~~~~fg~~~~~~~~~~~~~~dGIlGLg~~~~----------- 216 (620)
|.|.+.|++|+.+.|.+++|+|+|++ ++++++.|||++.... .+||||||++..
T Consensus 72 ------~~~~i~Yg~gs~~~G~~~~D~v~~g~---~~v~~~~fg~~~~~~~------~~GilGLg~~~~~~~~~~~~~~~ 136 (339)
T 3fv3_A 72 ------AAFTIRYGDGSTSQGTWGKDTVTING---VSITGQQIADVTQTSV------DQGILGIGYTSNEAVYDTSGRQT 136 (339)
T ss_dssp ------EEEEEECTTSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEESS------SSCEEECSCGGGCCCBCTTSCBC
T ss_pred ------ceEEEEECCCceEEEEEEEEEEEECC---EEECceEEEEEEecCC------CceeEEecCcccccccccccccc
Confidence 68999999988999999999999998 7789999999988753 699999999754
Q ss_pred -----chHHHHHHcCCcc-cceEEeecCCCCCCceEEECCCCCCC---CceEeecCCCCCCeeEEEEeEEEEccEEecCC
Q 047816 217 -----SVVDQLVEKGVIS-DSFSLCYGGMDVGGGAMVLGGISPPK---DMVFTHSDPVRSPYYNIDLKVIHVAGKPLPLN 287 (620)
Q Consensus 217 -----s~~~~L~~~g~I~-~~FSl~l~~~~~~~G~l~fGgiD~~~---~~~~~~~~~~~~~~w~v~l~~i~v~g~~~~~~ 287 (620)
+|+++|++||+|+ ++||+||++.+...|.|+|||+|+++ .+.+++.. ...+|.|.+++|.|+++.+..
T Consensus 137 ~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~--~~~~~~v~l~~i~v~g~~~~~- 213 (339)
T 3fv3_A 137 TPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVT--SSQALTISLASVNLKGSSFSF- 213 (339)
T ss_dssp SCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEBC--CSSSCEEEEEEEEESSCEEEE-
T ss_pred CccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEecc--cCccEEEEEEEEEECCEeecC-
Confidence 3899999999998 89999999876668999999999998 34555543 456999999999999987652
Q ss_pred CCccCCCCceEeeccceeeeecHHHHHHHHHHHHHHhhhcccccCCCCCCccccccCCCCCccccCCCCCeEEEEECCCc
Q 047816 288 PKVFDGKHGTVLDSGTTYAYLPEAAFLAFKDAIMSELQSLKQIRGPDPNYNDICFSGAPSDVSQLSDTFPAVEMAFGNGQ 367 (620)
Q Consensus 288 ~~~~~~~~~ailDSGtt~~~LP~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~ 367 (620)
...++|||||++++||++++++|++++.+.+.. .....+.|..+|+. ..+|+|+|+|++|.
T Consensus 214 ------~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~---~~~~~~~~~~~C~~----------~~~p~i~f~f~~g~ 274 (339)
T 3fv3_A 214 ------GDGALLDSGTTLTYFPSDFAAQLADKAGARLVQ---VARDQYLYFIDCNT----------DTSGTTVFNFGNGA 274 (339)
T ss_dssp ------EEEEEECTTBSSEEECHHHHHHHHHHHTCEEEE---EETTEEEEEECTTC----------CCCSEEEEEETTSC
T ss_pred ------CccEEEeCCCCCEecCHHHHHHHHHHcCCEEcc---ccccCceEEEecCC----------CCCCcEEEEECCCC
Confidence 247999999999999999999999999765431 11123457788942 35899999996689
Q ss_pred EEEeCCCCcEEEecccCCeEEEEEEecCCCCceeehHhhhceEEEEEeCCCCEEEEEecCCccccccccc
Q 047816 368 KLLLAPENYLFRHSKVRGAYCLGIFQNGRDPTTLLGGIIVRNTLVMYDREHSKIGFWKTNCSELWERLHI 437 (620)
Q Consensus 368 ~~~l~~~~yi~~~~~~~~~~Cl~~~~~~~~~~~ILG~~fLr~~yvvfD~en~rIGfA~~~c~~~~~~~~~ 437 (620)
+++||+++|+++.. ...|+..+.. ++.||||++|||++|+|||++++|||||+++|++..+++++
T Consensus 275 ~~~v~~~~~~~~~~---~~~C~~~i~~--~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~~s~i~~i 339 (339)
T 3fv3_A 275 KITVPNTEYVYQNG---DGTCLWGIQP--SDDTILGDNFLRHAYLLYNLDANTISIAQVKYTTDSSISAV 339 (339)
T ss_dssp EEEEEGGGGEEECS---SSCEEESEEE--CSSCEECHHHHTTEEEEEETTTTEEEEEEBCCCSCCCEEEC
T ss_pred EEEECHHHheeeCC---CCeEEEEEEe--CCcEEeChHHHhCEEEEEECCCCEEEEEecCCCCccceEEC
Confidence 99999999998753 3467443333 45799999999999999999999999999999987766654
No 7
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=3.7e-54 Score=453.09 Aligned_cols=313 Identities=23% Similarity=0.396 Sum_probs=257.0
Q ss_pred eeeeccCCccceeEEEEEEecCCCcEEEEEEeCCCCceeEeCCC--CC---------CCCCCCCCCCCCCCCcccccccC
Q 047816 73 RMRLYDDLLLNGYYTTRLWIGTPPQTFALIVDTGSTVTYVPCAT--CE---------HCGDHQDPKFEPDLSSTYQPVKC 141 (620)
Q Consensus 73 ~~~l~~~~~~~~~Y~~~i~iGTP~Q~~~v~vDTGSs~~WV~~~~--c~---------~C~~~~~~~y~p~~SsT~~~~~c 141 (620)
.+++.++ +++|+++|.||||+|++.|++||||+++||+++. |. .|..+ +.|+|++|+||+..+
T Consensus 4 ~~~l~~~---~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~--~~y~~~~SsT~~~~~- 77 (342)
T 3pvk_A 4 PVTLHNE---QVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQK--GTYDPSGSSASQDLN- 77 (342)
T ss_dssp EEEEEEC---SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTT--CCBCGGGCTTCEEEE-
T ss_pred ceEEecC---CcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCCC--CcCCCccCcceeecC-
Confidence 3455543 5689999999999999999999999999998654 63 56544 799999999999986
Q ss_pred cCCcccCCCCCcceeEEeeccCCceeEEEEEEEEEeCCCCCCCccceEEEEEEeccCCCcCCCcceEEecCCCC------
Q 047816 142 NLYCNCDRERAQCVYERKYAEMSSSSGVLGEDIISFGNESDLKPQRAVFGCENVETGDLYSQHADGIIGLGRGD------ 215 (620)
Q Consensus 142 ~~~c~c~~~~~~~~~~~~Y~dg~~~~G~~~~D~v~lg~~~~~~~~~~~fg~~~~~~~~~~~~~~dGIlGLg~~~------ 215 (620)
|.|.+.|++|+.+.|.+++|+|+|++ +.+.++.||+++... ..+||||||++.
T Consensus 78 ------------~~~~i~Yg~gs~~~G~~~~D~v~ig~---~~v~~~~fg~~~~~~------~~~GilGLg~~~~~~~~~ 136 (342)
T 3pvk_A 78 ------------TPFKIGYGDGSSSQGTLYKDTVGFGG---VSIKNQVLADVDSTS------IDQGILGVGYKTNEAGGS 136 (342)
T ss_dssp ------------EEEEEECSSSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEES------SSSCEEECSCGGGCSSCS
T ss_pred ------------CeEEEEecCCCeEEEEEEEEEEEECC---EEecceEEEEEEccC------CCccEEEecCcccccccc
Confidence 68999999987899999999999998 778999999998764 479999999986
Q ss_pred -CchHHHHHHcCCcc-cceEEeecCCCCCCceEEECCCCCCCC---ceEeecCCCCCCeeEEEEeEEEEccEEecCCCCc
Q 047816 216 -LSVVDQLVEKGVIS-DSFSLCYGGMDVGGGAMVLGGISPPKD---MVFTHSDPVRSPYYNIDLKVIHVAGKPLPLNPKV 290 (620)
Q Consensus 216 -~s~~~~L~~~g~I~-~~FSl~l~~~~~~~G~l~fGgiD~~~~---~~~~~~~~~~~~~w~v~l~~i~v~g~~~~~~~~~ 290 (620)
.+++++|++||+|+ ++||+||++.+...|.|+|||+|++++ +.|++. ....+|.|.+++|.|+++.+..
T Consensus 137 ~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~--~~~~~~~v~l~~i~v~g~~~~~---- 210 (342)
T 3pvk_A 137 YDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPV--TSDRELRISLGSVEVSGKTINT---- 210 (342)
T ss_dssp SCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEC--CCSSSCEEEEEEEEETTEEEEE----
T ss_pred CCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeec--CccceEEEEEeEEEECCEEecC----
Confidence 47999999999998 899999988666789999999999983 445554 3456999999999999998763
Q ss_pred cCCCCceEeeccceeeeecHHHHHHHHHHHHHHhhhcccccCCCCCCccccccCCCCCccccCCCCCeEEEEECCCcEEE
Q 047816 291 FDGKHGTVLDSGTTYAYLPEAAFLAFKDAIMSELQSLKQIRGPDPNYNDICFSGAPSDVSQLSDTFPAVEMAFGNGQKLL 370 (620)
Q Consensus 291 ~~~~~~ailDSGtt~~~LP~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~ 370 (620)
.+..++|||||++++||++++++|++++.+..... ......|..+| ...|+|+|+|++|.+++
T Consensus 211 --~~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~---~~~~~~~~~~C------------~~~p~i~f~f~~g~~~~ 273 (342)
T 3pvk_A 211 --DNVDVLLDSGTTITYLQQDLADQIIKAFNGKLTQD---SNGNSFYEVDC------------NLSGDVVFNFSKNAKIS 273 (342)
T ss_dssp --EEEEEEECTTCSSEEECHHHHHHHHHHTTCEEEEC---TTSCEEEEECS------------CCCSEEEEEESTTCEEE
T ss_pred --CCceEEEeCCCCCeecCHHHHHHHHHHcCCeeccc---CCCceEEEEec------------CCCCceEEEECCCCEEE
Confidence 23579999999999999999999999996654210 00012377888 34599999996689999
Q ss_pred eCCCCcEEEecccCC---eEEEEEEecCCCCceeehHhhhceEEEEEeCCCCEEEEEecCCccccccccc
Q 047816 371 LAPENYLFRHSKVRG---AYCLGIFQNGRDPTTLLGGIIVRNTLVMYDREHSKIGFWKTNCSELWERLHI 437 (620)
Q Consensus 371 l~~~~yi~~~~~~~~---~~Cl~~~~~~~~~~~ILG~~fLr~~yvvfD~en~rIGfA~~~c~~~~~~~~~ 437 (620)
||+++|+++.....+ ..|+..+... +.||||+.|||++|+|||++++||||||++|++.+++++|
T Consensus 274 vp~~~~~~~~~~~~g~~~~~C~~~i~~~--~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~~s~iv~i 341 (342)
T 3pvk_A 274 VPASEFAASLQGDDGQPYDKCQLLFDVN--DANILGDNFLRSAYIVYDLDDNEISLAQVKYTSASSISAL 341 (342)
T ss_dssp EEGGGGEEC----------CEEESEEEC--TTCEECHHHHTTEEEEEETTTTEEEEEEBCCCSCCCEEEC
T ss_pred EcHHHheeeccccCCCcCCeeEEEEeeC--CCeEeCHHHHhcEEEEEECCCCEEEEEecCCCCCCCEEEe
Confidence 999999987432222 6797666553 6899999999999999999999999999999987777765
No 8
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=4.5e-54 Score=452.29 Aligned_cols=313 Identities=23% Similarity=0.384 Sum_probs=259.4
Q ss_pred eeeeeccCCccceeEEEEEEecCCCcEEEEEEeCCCCceeEeCC--CCC---------CCCCCCCCCCCCCCCccccccc
Q 047816 72 ARMRLYDDLLLNGYYTTRLWIGTPPQTFALIVDTGSTVTYVPCA--TCE---------HCGDHQDPKFEPDLSSTYQPVK 140 (620)
Q Consensus 72 ~~~~l~~~~~~~~~Y~~~i~iGTP~Q~~~v~vDTGSs~~WV~~~--~c~---------~C~~~~~~~y~p~~SsT~~~~~ 140 (620)
+.+++.+ .+++|+++|.||||+|++.|++||||+++||++. .|. .|..+ +.|+|++|+||+..+
T Consensus 3 v~~~l~~---~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~--~~y~~~~SsT~~~~~ 77 (342)
T 2qzx_A 3 VAVTLHN---EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSA--GSYSPASSRTSQNLN 77 (342)
T ss_dssp EEEEEEE---CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTT--CCBCGGGCTTCEEEE
T ss_pred eeEEEec---CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCC--CcCCcccCCCcccCC
Confidence 3456654 2568999999999999999999999999999865 575 35544 799999999999976
Q ss_pred CcCCcccCCCCCcceeEEeeccCCceeEEEEEEEEEeCCCCCCCccceEEEEEEeccCCCcCCCcceEEecCCCCC----
Q 047816 141 CNLYCNCDRERAQCVYERKYAEMSSSSGVLGEDIISFGNESDLKPQRAVFGCENVETGDLYSQHADGIIGLGRGDL---- 216 (620)
Q Consensus 141 c~~~c~c~~~~~~~~~~~~Y~dg~~~~G~~~~D~v~lg~~~~~~~~~~~fg~~~~~~~~~~~~~~dGIlGLg~~~~---- 216 (620)
|.|.+.|++|+.+.|.+++|+|++++ +++.++.|||++... ..+||||||++..
T Consensus 78 -------------~~~~i~Yg~Gs~~~G~~~~D~v~~g~---~~v~~~~fg~~~~~~------~~~GilGLg~~~~~~~~ 135 (342)
T 2qzx_A 78 -------------TRFDIKYGDGSYAKGKLYKDTVGIGG---VSVRDQLFANVWSTS------ARKGILGIGFQSGEATE 135 (342)
T ss_dssp -------------EEEEEECTTSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEEC------SSSCEEECSCGGGCSSS
T ss_pred -------------CcEEEEeCCCCeEEEEEEEEEEEECC---EEecceEEEEEEecC------CCcCEEEEccccccCCC
Confidence 68999999988889999999999998 678999999998764 4799999999754
Q ss_pred ----chHHHHHHcCCcc-cceEEeecCCCCCCceEEECCCCCCC---CceEeecCCCCCCeeEEEEeEEEEccEEecCCC
Q 047816 217 ----SVVDQLVEKGVIS-DSFSLCYGGMDVGGGAMVLGGISPPK---DMVFTHSDPVRSPYYNIDLKVIHVAGKPLPLNP 288 (620)
Q Consensus 217 ----s~~~~L~~~g~I~-~~FSl~l~~~~~~~G~l~fGgiD~~~---~~~~~~~~~~~~~~w~v~l~~i~v~g~~~~~~~ 288 (620)
+++++|++||+|+ ++||+||++.+...|.|+|||+|+++ .+.|+++ ....+|.|.+++|+|+++.+..
T Consensus 136 ~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~--~~~~~~~v~l~~i~v~g~~~~~-- 211 (342)
T 2qzx_A 136 FDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPI--TSEKKLTVGLRSVNVRGRNVDA-- 211 (342)
T ss_dssp SCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEC--CCSSSCEEEEEEEEETTEEEEE--
T ss_pred ccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEec--cCCceEEEEEeEEEECCEecCC--
Confidence 7999999999998 89999999765668999999999987 3445554 3456999999999999987752
Q ss_pred CccCCCCceEeeccceeeeecHHHHHHHHHHHHHHhhhcccccCCCCCCccccccCCCCCccccCCCCCeEEEEECCCcE
Q 047816 289 KVFDGKHGTVLDSGTTYAYLPEAAFLAFKDAIMSELQSLKQIRGPDPNYNDICFSGAPSDVSQLSDTFPAVEMAFGNGQK 368 (620)
Q Consensus 289 ~~~~~~~~ailDSGtt~~~LP~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~ 368 (620)
...++|||||++++||++++++|++++.++... .......|..+| ...|+|+|+|++|.+
T Consensus 212 -----~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~---~~~~~~~~~~~C------------~~~p~i~f~f~~g~~ 271 (342)
T 2qzx_A 212 -----NTNVLLDSGTTISYFTRSIVRNILYAIGAQMKF---DSAGNKVYVADC------------KTSGTIDFQFGNNLK 271 (342)
T ss_dssp -----EEEEEECTTCSSEEECHHHHHHHHHHHTCEEEE---CTTSCEEEEECT------------TCCCEEEEEETTTEE
T ss_pred -----CcCEEEeCCCCCEEcCHHHHHHHHHHhCCeeee---ccCCCcEEEEEC------------CCCCcEEEEECCCcE
Confidence 247999999999999999999999998765421 011122566788 347999999977899
Q ss_pred EEeCCCCcEEEec---ccCCeEEEEEEecCCCCceeehHhhhceEEEEEeCCCCEEEEEecCCccccccccc
Q 047816 369 LLLAPENYLFRHS---KVRGAYCLGIFQNGRDPTTLLGGIIVRNTLVMYDREHSKIGFWKTNCSELWERLHI 437 (620)
Q Consensus 369 ~~l~~~~yi~~~~---~~~~~~Cl~~~~~~~~~~~ILG~~fLr~~yvvfD~en~rIGfA~~~c~~~~~~~~~ 437 (620)
++||+++|+++.. ..++..|+..++.. +.||||+.|||++|+|||++++|||||+++|+...++++|
T Consensus 272 ~~i~~~~~~~~~~~~~~~~~~~C~~~i~~~--~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~~~i~~i 341 (342)
T 2qzx_A 272 ISVPVSEFLFQTYYTSGKPFPKCEVRIRES--EDNILGDNFLRSAYVVYNLDDKKISMAPVKYTSESDIVAI 341 (342)
T ss_dssp EEEEGGGGEECCBCTTSCBCSSEEESEEEC--SSCEECHHHHTTEEEEEETTTTEEEEEEBCCCSCCCEEEC
T ss_pred EEEcHHHhcccccccCCCCCCccEEEEecC--CCcEeChHhhhcEEEEEECCCCEEEEEeeCCCCCCCeEEc
Confidence 9999999998743 11245798766654 3699999999999999999999999999999987777765
No 9
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=5.7e-54 Score=447.81 Aligned_cols=305 Identities=25% Similarity=0.483 Sum_probs=252.5
Q ss_pred eeeeccCCccceeEEEEEEecCCCcEEEEEEeCCCCceeEeCCCC--CCCCCCCCCCCCCCCCcccccccCcCCcccCCC
Q 047816 73 RMRLYDDLLLNGYYTTRLWIGTPPQTFALIVDTGSTVTYVPCATC--EHCGDHQDPKFEPDLSSTYQPVKCNLYCNCDRE 150 (620)
Q Consensus 73 ~~~l~~~~~~~~~Y~~~i~iGTP~Q~~~v~vDTGSs~~WV~~~~c--~~C~~~~~~~y~p~~SsT~~~~~c~~~c~c~~~ 150 (620)
..+|.+. .+++|+++|.||||+|++.|++||||+++||+|..| ..|..+ +.|+|++|+||+..+
T Consensus 5 ~~~l~n~--~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~--~~y~~~~SsT~~~~~---------- 70 (323)
T 3cms_A 5 SVPLTNY--LDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKNH--QRFDPRKSSTFQNLG---------- 70 (323)
T ss_dssp EEEEEEE--TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTS--CCBCGGGCTTCEEEE----------
T ss_pred eeeeEec--cCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCCcccccCC--CCCCCccCCCeEECC----------
Confidence 3556653 366899999999999999999999999999999999 478766 799999999999976
Q ss_pred CCcceeEEeeccCCceeEEEEEEEEEeCCCCCCCccceEEEEEEeccCC-CcCCCcceEEecCCCCC------chHHHHH
Q 047816 151 RAQCVYERKYAEMSSSSGVLGEDIISFGNESDLKPQRAVFGCENVETGD-LYSQHADGIIGLGRGDL------SVVDQLV 223 (620)
Q Consensus 151 ~~~~~~~~~Y~dg~~~~G~~~~D~v~lg~~~~~~~~~~~fg~~~~~~~~-~~~~~~dGIlGLg~~~~------s~~~~L~ 223 (620)
|.|.+.|++| ++.|.+++|+|++++ +++.++.|||+....+. +.....+||||||++.. +++++|+
T Consensus 71 ---~~~~i~Yg~G-s~~G~~~~D~v~ig~---~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~ 143 (323)
T 3cms_A 71 ---KPLSIHYGTG-SMQGILGYDTVTVSN---IVDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYSIPVFDNMM 143 (323)
T ss_dssp ---EEEEEEETTE-EEEEEEEEEEEEETT---EEEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTTCCCHHHHHH
T ss_pred ---cEEEEEeCCC-CeEEEEEEEEEEECC---eEEeccEEEEEEecccccccccCCceEEecCcchhhccCCCCHHHHHH
Confidence 5899999995 489999999999998 67889999999987552 32346799999999754 5899999
Q ss_pred HcCCcc-cceEEeecCCCCCCceEEECCCCCCCC---ceEeecCCCCCCeeEEEEeEEEEccEEecCCCCccCCCCceEe
Q 047816 224 EKGVIS-DSFSLCYGGMDVGGGAMVLGGISPPKD---MVFTHSDPVRSPYYNIDLKVIHVAGKPLPLNPKVFDGKHGTVL 299 (620)
Q Consensus 224 ~~g~I~-~~FSl~l~~~~~~~G~l~fGgiD~~~~---~~~~~~~~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~~ail 299 (620)
+||+|. ++||+||++.+.. |.|+|||+|++++ +.|++. ....+|.|.+++|.|+++.+.. .....++|
T Consensus 144 ~q~~i~~~~FS~~l~~~~~~-G~l~fGg~d~~~~~g~l~~~p~--~~~~~~~v~l~~i~v~~~~~~~-----~~~~~aii 215 (323)
T 3cms_A 144 NRHLVAQDLFSVYMDRNGQE-SMLTLGAIDPSYYTGSLHWVPV--TVQQYWQFTVDSVTISGVVVAC-----EGGCQAIL 215 (323)
T ss_dssp HTTCSSSSEEEEECCTTSSC-EEEEESCCCGGGEEEEEEEEEC--SSBTTBEEEEEEEEETTEEEES-----TTCEEEEE
T ss_pred HCCCCCCCEEEEEECCCCCC-EEEEECCCChhhccCceEEEEC--ccCCeEEEEEeeEEECCEEeec-----CCCcEEEE
Confidence 999997 8999999976433 9999999999873 344444 3567999999999999987753 23457999
Q ss_pred eccceeeeecHHHHHHHHHHHHHHhhhcccccCCCCCCccccccCCCCCccccCCCCCeEEEEECCCcEEEeCCCCcEEE
Q 047816 300 DSGTTYAYLPEAAFLAFKDAIMSELQSLKQIRGPDPNYNDICFSGAPSDVSQLSDTFPAVEMAFGNGQKLLLAPENYLFR 379 (620)
Q Consensus 300 DSGtt~~~LP~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~~~~yi~~ 379 (620)
||||++++||++++++|.+++++... ..+.|.++|+.. +.+|+|+|+| +|.+++||+++|+++
T Consensus 216 DSGTt~~~lP~~~~~~l~~~~~~~~~-------~~g~~~~~C~~~---------~~~P~i~f~f-~g~~~~i~~~~y~~~ 278 (323)
T 3cms_A 216 DTGTSKLVGPSSDILNIQQAIGATQN-------QYGEFDIDCDNL---------SYMPTVVFEI-NGKMYPLTPSAYTSQ 278 (323)
T ss_dssp CTTCCSEEECHHHHHHHHHHHTCEEE-------TTTEEEECTTCT---------TTSCCEEEEE-TTEEEEECHHHHEEE
T ss_pred ecCCccEeCCHHHHHHHHHHhCCeec-------CCCcEEEECCCC---------ccCceEEEEE-CCEEEEECHHHhccC
Confidence 99999999999999999999854321 234567788531 4689999999 889999999999998
Q ss_pred ecccCCeEEEE-EEecCCCCceeehHhhhceEEEEEeCCCCEEEEEecC
Q 047816 380 HSKVRGAYCLG-IFQNGRDPTTLLGGIIVRNTLVMYDREHSKIGFWKTN 427 (620)
Q Consensus 380 ~~~~~~~~Cl~-~~~~~~~~~~ILG~~fLr~~yvvfD~en~rIGfA~~~ 427 (620)
++..|+. +.....++.||||+.|||++|+|||++++|||||+++
T Consensus 279 ----~~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 279 ----DQGFCTSGFQSENHSQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp ----ETTEEEESEEEC---CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ----CCCEEEEEEEeCCCCCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 2568986 4443335789999999999999999999999999874
No 10
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=7.4e-54 Score=446.58 Aligned_cols=297 Identities=25% Similarity=0.500 Sum_probs=251.4
Q ss_pred ceeEEEEEEecCCCcEEEEEEeCCCCceeEeCCCCC--CCCCCCCCCCCCCCCcccccccCcCCcccCCCCCcceeEEee
Q 047816 83 NGYYTTRLWIGTPPQTFALIVDTGSTVTYVPCATCE--HCGDHQDPKFEPDLSSTYQPVKCNLYCNCDRERAQCVYERKY 160 (620)
Q Consensus 83 ~~~Y~~~i~iGTP~Q~~~v~vDTGSs~~WV~~~~c~--~C~~~~~~~y~p~~SsT~~~~~c~~~c~c~~~~~~~~~~~~Y 160 (620)
+.+|+++|+||||+|+++|++||||+++||+|..|. .|..+ +.|+|++|+||+..+ |.|.+.|
T Consensus 10 d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~--~~y~~~~SsT~~~~~-------------~~~~i~Y 74 (320)
T 4aa9_A 10 DSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVCKNH--HRFDPRKSSTFRNLG-------------KPLSIHY 74 (320)
T ss_dssp CCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTS--CCBCGGGCTTCEEEE-------------EEEEEEE
T ss_pred CCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCCccccCCC--CCCCCCCCcCeEcCC-------------cEEEEEE
Confidence 668999999999999999999999999999999998 56655 799999999999976 6899999
Q ss_pred ccCCceeEEEEEEEEEeCCCCCCCccceEEEEEEeccCC-CcCCCcceEEecCCCCC------chHHHHHHcCCcc-cce
Q 047816 161 AEMSSSSGVLGEDIISFGNESDLKPQRAVFGCENVETGD-LYSQHADGIIGLGRGDL------SVVDQLVEKGVIS-DSF 232 (620)
Q Consensus 161 ~dg~~~~G~~~~D~v~lg~~~~~~~~~~~fg~~~~~~~~-~~~~~~dGIlGLg~~~~------s~~~~L~~~g~I~-~~F 232 (620)
++|+ +.|.+++|+|+|++ +++.++.|||+....+. +.....+||||||++.. +++++|++||+|+ +.|
T Consensus 75 g~gs-~~G~~~~D~v~ig~---~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~F 150 (320)
T 4aa9_A 75 GTGS-MEGFLGYDTVTVSN---IVDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPVFDNMMDRHLVARDLF 150 (320)
T ss_dssp TTEE-EEEEEEEEEEEETT---EEEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSSSEE
T ss_pred CCcE-EEEEEEEEEEEECC---EeecCeEEEEEEEcccccccccCcccEEecCcccccccCCCCHHHHHHhCCCCCCceE
Confidence 9955 89999999999999 77899999999987653 33456799999998653 5999999999998 899
Q ss_pred EEeecCCCCCCceEEECCCCCCCC---ceEeecCCCCCCeeEEEEeEEEEccEEecCCCCccCCCCceEeeccceeeeec
Q 047816 233 SLCYGGMDVGGGAMVLGGISPPKD---MVFTHSDPVRSPYYNIDLKVIHVAGKPLPLNPKVFDGKHGTVLDSGTTYAYLP 309 (620)
Q Consensus 233 Sl~l~~~~~~~G~l~fGgiD~~~~---~~~~~~~~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~~ailDSGtt~~~LP 309 (620)
|+||++. ...|.|+|||+|++++ +.|+++ ....+|.|.+++|.|+++.+.. .....++|||||++++||
T Consensus 151 s~~l~~~-~~~G~l~fGg~d~~~~~g~l~~~p~--~~~~~w~v~l~~i~v~~~~~~~-----~~~~~~iiDsGtt~~~lP 222 (320)
T 4aa9_A 151 SVYMDRN-GQGSMLTLGAIDPSYYTGSLHWVPV--TLQQYWQFTVDSVTINGVAVAC-----VGGCQAILDTGTSVLFGP 222 (320)
T ss_dssp EEECCSS-SSCCEEEETCCCGGGEEEEEEEEEC--SSBTTBEEEECEEEETTEEEES-----TTCEEEEECTTCSSEEEE
T ss_pred EEEeCCC-CCCeEEEEcccCHHHccCceEEEEc--ccCCceEEEEeEEEECCEEecc-----CCCcEEEEECCCCcEECC
Confidence 9999975 5689999999999984 344443 4568999999999999987753 234579999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcccccCCCCCCccccccCCCCCccccCCCCCeEEEEECCCcEEEeCCCCcEEEecccCCeEEE
Q 047816 310 EAAFLAFKDAIMSELQSLKQIRGPDPNYNDICFSGAPSDVSQLSDTFPAVEMAFGNGQKLLLAPENYLFRHSKVRGAYCL 389 (620)
Q Consensus 310 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~~~~yi~~~~~~~~~~Cl 389 (620)
++++++|.+++++.. ...+.|.++|.. .+.+|+|+|+| +|.+++||+++|+.+. +..|+
T Consensus 223 ~~~~~~i~~~~~~~~-------~~~g~~~~~C~~---------~~~~p~i~f~f-~g~~~~l~~~~y~~~~----~~~C~ 281 (320)
T 4aa9_A 223 SSDILKIQMAIGATE-------NRYGEFDVNCGN---------LRSMPTVVFEI-NGRDYPLSPSAYTSKD----QGFCT 281 (320)
T ss_dssp HHHHHHHHHHTTCEE-------CTTSCEEECGGG---------GGGCCCEEEEE-TTEEEEECHHHHEEEE----TTEEE
T ss_pred HHHHHHHHHHhCCcc-------cCCCcEEEeCCC---------CCcCceEEEEE-CCEEEEECHHHhccCC----CCeEE
Confidence 999999999885432 133567788843 14689999999 8999999999999763 56798
Q ss_pred E-EEecCCCCceeehHhhhceEEEEEeCCCCEEEEEecC
Q 047816 390 G-IFQNGRDPTTLLGGIIVRNTLVMYDREHSKIGFWKTN 427 (620)
Q Consensus 390 ~-~~~~~~~~~~ILG~~fLr~~yvvfD~en~rIGfA~~~ 427 (620)
. +.....++.||||++|||++|+|||++++|||||+++
T Consensus 282 ~~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 282 SGFQGDNNSELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp ESEEEETTCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEEcCCCCCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 5 5444444679999999999999999999999999974
No 11
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=6.6e-54 Score=451.02 Aligned_cols=311 Identities=26% Similarity=0.461 Sum_probs=257.6
Q ss_pred eeeeeccCCccceeEEEEEEecCCCcEEEEEEeCCCCceeEeCCCCC----CCCCCCCCCCCCCCCcccccccCcCCccc
Q 047816 72 ARMRLYDDLLLNGYYTTRLWIGTPPQTFALIVDTGSTVTYVPCATCE----HCGDHQDPKFEPDLSSTYQPVKCNLYCNC 147 (620)
Q Consensus 72 ~~~~l~~~~~~~~~Y~~~i~iGTP~Q~~~v~vDTGSs~~WV~~~~c~----~C~~~~~~~y~p~~SsT~~~~~c~~~c~c 147 (620)
..++|.+.. +.+|+++|.||||+|+++|++||||+++||+|..|. .|..+ +.|+|++|+||+..+
T Consensus 8 ~~~~l~n~~--d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C~~~--~~y~~~~SsT~~~~~------- 76 (341)
T 3k1w_A 8 SSVILTNYM--DTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYH--KLFDASDSSSYKHNG------- 76 (341)
T ss_dssp EEEEEEEET--TTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHHHTS--CCBCGGGCTTCEEEE-------
T ss_pred ccccceEcc--CCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcccCC--CCCCCCcCcCeeECC-------
Confidence 456666643 668999999999999999999999999999999998 67655 799999999999876
Q ss_pred CCCCCcceeEEeeccCCceeEEEEEEEEEeCCCCCCCccceEEEEEEeccCC-CcCCCcceEEecCCCCC------chHH
Q 047816 148 DRERAQCVYERKYAEMSSSSGVLGEDIISFGNESDLKPQRAVFGCENVETGD-LYSQHADGIIGLGRGDL------SVVD 220 (620)
Q Consensus 148 ~~~~~~~~~~~~Y~dg~~~~G~~~~D~v~lg~~~~~~~~~~~fg~~~~~~~~-~~~~~~dGIlGLg~~~~------s~~~ 220 (620)
|.|.+.|++|. +.|.+++|+|+||+ +++ ++.|||+...... +.....+||||||++.. ++++
T Consensus 77 ------~~~~i~Yg~gs-~~G~~~~D~v~ig~---~~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~ 145 (341)
T 3k1w_A 77 ------TELTLRYSTGT-VSGFLSQDIITVGG---ITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFD 145 (341)
T ss_dssp ------EEEEEEETTEE-EEEEEEEEEEEETT---EEE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCHHH
T ss_pred ------CEEEEEECCcE-EEEEEEEEEEEECC---cee-eEEEEEEEEccccccccCCcceEEECCchhhcccCCCCHHH
Confidence 68999999855 99999999999998 677 9999999987654 44556799999999765 4899
Q ss_pred HHHHcCCcc-cceEEeecCCC----CCCceEEECCCCCCCCc-eEeecCCCCCCeeEEEEeEEEEccEEecCCCCccCCC
Q 047816 221 QLVEKGVIS-DSFSLCYGGMD----VGGGAMVLGGISPPKDM-VFTHSDPVRSPYYNIDLKVIHVAGKPLPLNPKVFDGK 294 (620)
Q Consensus 221 ~L~~~g~I~-~~FSl~l~~~~----~~~G~l~fGgiD~~~~~-~~~~~~~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~ 294 (620)
+|++||+|+ +.||+||++.. ..+|.|+|||+|++++. ...+.+.....+|.|.+++|.|+++.+.. ...
T Consensus 146 ~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~-----~~~ 220 (341)
T 3k1w_A 146 NIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLLC-----EDG 220 (341)
T ss_dssp HHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECSSTTSCEEEECCEEETTEEEEC-----TTC
T ss_pred HHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecCCCCEEEEEEeEEEECCEEeec-----CCC
Confidence 999999998 89999999764 34799999999999842 22333334678999999999999986532 234
Q ss_pred CceEeeccceeeeecHHHHHHHHHHHHHHhhhcccccCCCCCCccccccCCCCCccccCCCCCeEEEEECCCcEEEeCCC
Q 047816 295 HGTVLDSGTTYAYLPEAAFLAFKDAIMSELQSLKQIRGPDPNYNDICFSGAPSDVSQLSDTFPAVEMAFGNGQKLLLAPE 374 (620)
Q Consensus 295 ~~ailDSGtt~~~LP~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~~~ 374 (620)
..++|||||++++||++++++|++++++... ..+ |..+|.. .+.+|+|+|+| +|.+++|+++
T Consensus 221 ~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~-------~~g-~~~~C~~---------~~~~p~i~f~f-~g~~~~l~~~ 282 (341)
T 3k1w_A 221 CLALVDTGASYISGSTSSIEKLMEALGAKKR-------LFD-YVVKCNE---------GPTLPDISFHL-GGKEYTLTSA 282 (341)
T ss_dssp EEEEECTTCSSEEECHHHHHHHHHHHTCEEC-------SSC-EEEEGGG---------GGGCCCEEEEE-TTEEEEECHH
T ss_pred CEEEEECCCChhcCCHHHHHHHHHHcCCeec-------CCC-eEEeCCC---------CCcCCcEEEEE-CCEEEEECHH
Confidence 6799999999999999999999999865431 223 7788842 14689999999 7999999999
Q ss_pred CcEEEecccCCeEEEEEEec-----CCCCceeehHhhhceEEEEEeCCCCEEEEEecC
Q 047816 375 NYLFRHSKVRGAYCLGIFQN-----GRDPTTLLGGIIVRNTLVMYDREHSKIGFWKTN 427 (620)
Q Consensus 375 ~yi~~~~~~~~~~Cl~~~~~-----~~~~~~ILG~~fLr~~yvvfD~en~rIGfA~~~ 427 (620)
+|+++....++..|+..+.. ...+.||||++|||++|+|||+|++|||||+++
T Consensus 283 ~~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 283 DYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp HHBCCSCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred HheeEccCCCCCeEEeEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 99987654446789854443 234689999999999999999999999999986
No 12
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=3.9e-53 Score=442.77 Aligned_cols=305 Identities=26% Similarity=0.496 Sum_probs=253.1
Q ss_pred eeeeccCCccceeEEEEEEecCCCcEEEEEEeCCCCceeEeCCCCCC--CCCCCCCCCCCCCCcccccccCcCCcccCCC
Q 047816 73 RMRLYDDLLLNGYYTTRLWIGTPPQTFALIVDTGSTVTYVPCATCEH--CGDHQDPKFEPDLSSTYQPVKCNLYCNCDRE 150 (620)
Q Consensus 73 ~~~l~~~~~~~~~Y~~~i~iGTP~Q~~~v~vDTGSs~~WV~~~~c~~--C~~~~~~~y~p~~SsT~~~~~c~~~c~c~~~ 150 (620)
.+++.+.. +++|+++|+||||+|++.|++||||+++||+|..|.. |..+ +.|+|++|+||+..+
T Consensus 4 ~~~l~~~~--~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~--~~y~~~~SsT~~~~~---------- 69 (329)
T 1dpj_A 4 DVPLTNYL--NAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLH--SKYDHEASSSYKANG---------- 69 (329)
T ss_dssp EEECEEET--TTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTS--CCBCGGGCTTCEEEE----------
T ss_pred ceeeeecC--CCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCCcccCCc--CcCCcccCcCeEECC----------
Confidence 35555433 6789999999999999999999999999999999986 7665 799999999999876
Q ss_pred CCcceeEEeeccCCceeEEEEEEEEEeCCCCCCCccceEEEEEEeccC-CCcCCCcceEEecCCCCC------chHHHHH
Q 047816 151 RAQCVYERKYAEMSSSSGVLGEDIISFGNESDLKPQRAVFGCENVETG-DLYSQHADGIIGLGRGDL------SVVDQLV 223 (620)
Q Consensus 151 ~~~~~~~~~Y~dg~~~~G~~~~D~v~lg~~~~~~~~~~~fg~~~~~~~-~~~~~~~dGIlGLg~~~~------s~~~~L~ 223 (620)
|.|.+.|++| ++.|.+++|+|++++ ++++++.|||++.+.+ .+.....+||||||++.. +++++|+
T Consensus 70 ---~~~~i~Yg~G-s~~G~~~~D~v~ig~---~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~l~ 142 (329)
T 1dpj_A 70 ---TEFAIQYGTG-SLEGYISQDTLSIGD---LTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAI 142 (329)
T ss_dssp ---EEEEEEETTE-EEEEEEEEEEEEETT---EEEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCCCHHHHHH
T ss_pred ---cEEEEEECCc-eEEEEEEEEEEEECC---eEECCeEEEEEEecCccccccCCcceEEEeCCchhhccCCCCHHHHHH
Confidence 6899999996 799999999999998 6789999999988754 333456899999999765 4789999
Q ss_pred HcCCcc-cceEEeecCCC---CCCceEEECCCCCCCC---ceEeecCCCCCCeeEEEEeEEEEccEEecCCCCccCCCCc
Q 047816 224 EKGVIS-DSFSLCYGGMD---VGGGAMVLGGISPPKD---MVFTHSDPVRSPYYNIDLKVIHVAGKPLPLNPKVFDGKHG 296 (620)
Q Consensus 224 ~~g~I~-~~FSl~l~~~~---~~~G~l~fGgiD~~~~---~~~~~~~~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~~ 296 (620)
+||+|+ +.||+||++.. ..+|.|+|||+|++++ +.|+++ ....+|.|.+++|+|+++.+.. .+..
T Consensus 143 ~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~--~~~~~~~v~l~~i~v~~~~~~~------~~~~ 214 (329)
T 1dpj_A 143 QQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPV--RRKAYWEVKFEGIGLGDEYAEL------ESHG 214 (329)
T ss_dssp HTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEEC--SSBTTBEEEEEEEEETTEEEEC------SSCE
T ss_pred hcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEc--CCCceEEEEeeeEEECCeEecC------CCcc
Confidence 999997 89999998643 2479999999999873 344443 3567999999999999987752 3457
Q ss_pred eEeeccceeeeecHHHHHHHHHHHHHHhhhcccccCCCCCCccccccCCCCCccccCCCCCeEEEEECCCcEEEeCCCCc
Q 047816 297 TVLDSGTTYAYLPEAAFLAFKDAIMSELQSLKQIRGPDPNYNDICFSGAPSDVSQLSDTFPAVEMAFGNGQKLLLAPENY 376 (620)
Q Consensus 297 ailDSGtt~~~LP~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~~~~y 376 (620)
++|||||++++||++++++|.+++++. ....+.|..+|.. ...+|+|+|+| +|.+++||+++|
T Consensus 215 aiiDSGTt~~~lP~~~~~~l~~~~~~~-------~~~~g~~~~~C~~---------~~~~P~i~f~f-~g~~~~i~~~~y 277 (329)
T 1dpj_A 215 AAIDTGTSLITLPSGLAEMINAEIGAK-------KGWTGQYTLDCNT---------RDNLPDLIFNF-NGYNFTIGPYDY 277 (329)
T ss_dssp EEECTTCSCEEECHHHHHHHHHHHTCE-------ECTTSSEEECGGG---------GGGCCCEEEEE-TTEEEEECTTTS
T ss_pred EEeeCCCCcEECCHHHHHHHHHHhCCc-------cCCCCeEEEECCC---------CCcCCcEEEEE-CCEEEEECHHHh
Confidence 999999999999999999999998543 1234466778842 25789999999 789999999999
Q ss_pred EEEecccCCeEEEEEEec-----CCCCceeehHhhhceEEEEEeCCCCEEEEEecC
Q 047816 377 LFRHSKVRGAYCLGIFQN-----GRDPTTLLGGIIVRNTLVMYDREHSKIGFWKTN 427 (620)
Q Consensus 377 i~~~~~~~~~~Cl~~~~~-----~~~~~~ILG~~fLr~~yvvfD~en~rIGfA~~~ 427 (620)
+++.. ..|+..+.. ..++.||||++|||++|+|||++|+|||||+++
T Consensus 278 ~~~~~----~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 278 TLEVS----GSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp EEEET----TEEEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EecCC----CEEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 99763 579854432 234689999999999999999999999999974
No 13
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=2.2e-53 Score=450.32 Aligned_cols=316 Identities=22% Similarity=0.357 Sum_probs=260.2
Q ss_pred eeeeeccCCccceeEEEEEEecCCCcEEEEEEeCCCCceeEeCCCCC---CCCCCCCCCCCCCCCcccccccCcCCcccC
Q 047816 72 ARMRLYDDLLLNGYYTTRLWIGTPPQTFALIVDTGSTVTYVPCATCE---HCGDHQDPKFEPDLSSTYQPVKCNLYCNCD 148 (620)
Q Consensus 72 ~~~~l~~~~~~~~~Y~~~i~iGTP~Q~~~v~vDTGSs~~WV~~~~c~---~C~~~~~~~y~p~~SsT~~~~~c~~~c~c~ 148 (620)
...++.+. .+++|+++|.||||+|++.|+|||||+++||+|..|. .|..+ +.|+|++|+||+..+
T Consensus 8 ~~~~l~~~--~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~~--~~y~~~~SsT~~~~~-------- 75 (361)
T 1mpp_A 8 DTPGLYDF--DLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGK--RFFDPSSSSTFKETD-------- 75 (361)
T ss_dssp EEEEEEET--TTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSS--CCBCGGGCTTCEEEE--------
T ss_pred ceEEeecC--CCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCCC--CcCCCccCCceEecC--------
Confidence 34566653 3678999999999999999999999999999999998 78776 799999999999976
Q ss_pred CCCCcceeEEeeccCCceeEEEEEEEEEeCCCCCCCccceEEEEEEeccC------CCcCCCcceEEecCCCC-------
Q 047816 149 RERAQCVYERKYAEMSSSSGVLGEDIISFGNESDLKPQRAVFGCENVETG------DLYSQHADGIIGLGRGD------- 215 (620)
Q Consensus 149 ~~~~~~~~~~~Y~dg~~~~G~~~~D~v~lg~~~~~~~~~~~fg~~~~~~~------~~~~~~~dGIlGLg~~~------- 215 (620)
|.|.+.|++|+ +.|.+++|+|+|++ +++.++.|||+....+ .+.....+||||||++.
T Consensus 76 -----~~~~i~Yg~Gs-~~G~~~~D~v~~g~---~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~ 146 (361)
T 1mpp_A 76 -----YNLNITYGTGG-ANGIYFRDSITVGG---ATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTAMEAE 146 (361)
T ss_dssp -----EEEEEECSSCE-EEEEEEEEEEEETT---EEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGSHHHHH
T ss_pred -----CeEEEEECCce-EEEEEEEEEEEECC---EEEeceEEEEEEeccCccccccccccCCCCCEEEeCCccccccccc
Confidence 68999999965 89999999999998 7789999999998765 34456789999999863
Q ss_pred -----CchHHHHHHcCCcc-cceEEeecCCCCCCceEEECCCCCCC---CceEeecCCCCC--CeeEEEEeEEEEccEEe
Q 047816 216 -----LSVVDQLVEKGVIS-DSFSLCYGGMDVGGGAMVLGGISPPK---DMVFTHSDPVRS--PYYNIDLKVIHVAGKPL 284 (620)
Q Consensus 216 -----~s~~~~L~~~g~I~-~~FSl~l~~~~~~~G~l~fGgiD~~~---~~~~~~~~~~~~--~~w~v~l~~i~v~g~~~ 284 (620)
.+++++|++||+|. ++||+||++. ...|.|+|||+|+++ .+.|+++..... .+|.|.+++|.|+++.+
T Consensus 147 ~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l~~i~v~~~~~ 225 (361)
T 1mpp_A 147 YGDTYNTVHVNLYKQGLISSPVFSVYMNTN-DGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTGVKIDGSDA 225 (361)
T ss_dssp HSCCCCCHHHHHHHTTSSSSSEEEEECCCS-SSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEEEEEETTEEE
T ss_pred ccccCCCHHHHHHHcCCCCCcEEEEEecCC-CCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEEeEEEECCeee
Confidence 45888999999998 8999999975 457999999999987 345655433211 18999999999999876
Q ss_pred cCCCCccCCCCceE-eeccceeeeecHHHHHHHHHHHHHHhhhcccccCCCCCCccccccCCCCCccccCCCC-CeEEEE
Q 047816 285 PLNPKVFDGKHGTV-LDSGTTYAYLPEAAFLAFKDAIMSELQSLKQIRGPDPNYNDICFSGAPSDVSQLSDTF-PAVEMA 362 (620)
Q Consensus 285 ~~~~~~~~~~~~ai-lDSGtt~~~LP~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~-P~i~f~ 362 (620)
.. .....++ |||||++++||++++++|++++.+.+. ...+.|.++|+. . +.+ |+|+|+
T Consensus 226 ~~-----~~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~------~~~g~~~~~C~~--------~-~~~~p~i~f~ 285 (361)
T 1mpp_A 226 VS-----FDGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDAT------ESQQGYTVPCSK--------Y-QDSKTTFSLV 285 (361)
T ss_dssp EE-----EEEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCE------EETTEEEEEHHH--------H-TTCCCEEEEE
T ss_pred cc-----CCCCEEEEECCCCCceeCCHHHHHHHHHHhCCccc------CCCCcEEEECCC--------c-ccCCCcEEEE
Confidence 41 2345799 999999999999999999999866432 123356788853 1 456 999999
Q ss_pred E--CC----CcEEEeCCCCcEEEecccCCeEEE-EEEecCCCCceeehHhhhceEEEEEeCCCCEEEEEecCCccc
Q 047816 363 F--GN----GQKLLLAPENYLFRHSKVRGAYCL-GIFQNGRDPTTLLGGIIVRNTLVMYDREHSKIGFWKTNCSEL 431 (620)
Q Consensus 363 f--~~----g~~~~l~~~~yi~~~~~~~~~~Cl-~~~~~~~~~~~ILG~~fLr~~yvvfD~en~rIGfA~~~c~~~ 431 (620)
| ++ |.+|+||+++|+++... ++..|+ ++... .++.||||++|||++|+|||++++|||||+++|+..
T Consensus 286 f~~g~~~~~g~~~~i~~~~y~~~~~~-~~~~C~~~i~~~-~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~~~~~ 359 (361)
T 1mpp_A 286 LQKSGSSSDTIDVSVPISKMLLPVDK-SGETCMFIVLPD-GGNQFIVGNLFLRFFVNVYDFGKNRIGFAPLASGYE 359 (361)
T ss_dssp EECTTCSSCEEEEEEEGGGGEEECSS-SSCEEEESEEEE-SSSCCEEEHHHHTTEEEEEETTTTEEEEEEBCTTTC
T ss_pred EEcCCcCCCCeEEEECHHHhEEecCC-CCCeeEEEEEeC-CCCCEEEChHHhccEEEEEECCCCEEEEEEcccCCC
Confidence 9 42 89999999999997643 346897 45443 457899999999999999999999999999999864
No 14
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=2.8e-53 Score=442.86 Aligned_cols=303 Identities=26% Similarity=0.499 Sum_probs=254.7
Q ss_pred eeeccCCccceeEEEEEEecCCCcEEEEEEeCCCCceeEeCCCCC--CCCCCCCCCCCCCCCcccccccCcCCcccCCCC
Q 047816 74 MRLYDDLLLNGYYTTRLWIGTPPQTFALIVDTGSTVTYVPCATCE--HCGDHQDPKFEPDLSSTYQPVKCNLYCNCDRER 151 (620)
Q Consensus 74 ~~l~~~~~~~~~Y~~~i~iGTP~Q~~~v~vDTGSs~~WV~~~~c~--~C~~~~~~~y~p~~SsT~~~~~c~~~c~c~~~~ 151 (620)
+++.+. .+++|+++|.||||+|++.|++||||+++||+|..|. .|..+ +.|+|++|+||+..+
T Consensus 4 ~~l~n~--~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~--~~y~~~~SsT~~~~~----------- 68 (324)
T 1am5_A 4 EQMKNE--ADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACSNH--NKFKPRQSSTYVETG----------- 68 (324)
T ss_dssp EEEEEE--TTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHHHTS--CCBCGGGCTTCEEEE-----------
T ss_pred eeeecC--CCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccccCC--CcCCCccCCCeEeCC-----------
Confidence 456553 3678999999999999999999999999999999997 58765 799999999999876
Q ss_pred CcceeEEeeccCCceeEEEEEEEEEeCCCCCCCccceEEEEEEeccCC-CcCCCcceEEecCCCCC------chHHHHHH
Q 047816 152 AQCVYERKYAEMSSSSGVLGEDIISFGNESDLKPQRAVFGCENVETGD-LYSQHADGIIGLGRGDL------SVVDQLVE 224 (620)
Q Consensus 152 ~~~~~~~~Y~dg~~~~G~~~~D~v~lg~~~~~~~~~~~fg~~~~~~~~-~~~~~~dGIlGLg~~~~------s~~~~L~~ 224 (620)
|.|.+.|++| ++.|.+++|+|++++ +++.++.|||+....+. +.....+||||||++.. +++++|++
T Consensus 69 --~~~~i~Yg~G-s~~G~~~~D~v~~g~---~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~ 142 (324)
T 1am5_A 69 --KTVDLTYGTG-GMRGILGQDTVSVGG---GSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDNMGS 142 (324)
T ss_dssp --EEEEEECSSC-EEEEEEEEEEEESSS---SCEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGCCCHHHHHHH
T ss_pred --cEEEEEECCC-CeEEEEEECceeECC---cEEcccEEEEEEecccccccCCCCceEEecCCccccccCCCchHHhHHh
Confidence 6899999985 569999999999998 77899999999987654 33457899999999754 58999999
Q ss_pred cCCcc-cceEEeecCCCCCCceEEECCCCCCC---CceEeecCCCCCCeeEEEEeEEEEccEEecCCCCccCCCCceEee
Q 047816 225 KGVIS-DSFSLCYGGMDVGGGAMVLGGISPPK---DMVFTHSDPVRSPYYNIDLKVIHVAGKPLPLNPKVFDGKHGTVLD 300 (620)
Q Consensus 225 ~g~I~-~~FSl~l~~~~~~~G~l~fGgiD~~~---~~~~~~~~~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~~ailD 300 (620)
||+|. +.||+||++.+...|.|+|||+|+++ .+.|+++. ...+|.|.+++|+|+++.+.. .+ ..++||
T Consensus 143 qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~--~~~~~~v~l~~i~v~~~~~~~-----~~-~~aiiD 214 (324)
T 1am5_A 143 QSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVT--AEKYWQVALDGITVNGQTAAC-----EG-CQAIVD 214 (324)
T ss_dssp TTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEE--EETTEEEEECEEEETTEECCC-----CC-EEEEEC
T ss_pred cCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecC--CCcEEEEEEeEEEECCceeec-----cC-ceEEEe
Confidence 99997 89999999865568999999999987 44565543 457999999999999987531 12 689999
Q ss_pred ccceeeeecHHHHHHHHHHHHHHhhhcccccCCCCCCccccccCCCCCccccCCCCCeEEEEECCCcEEEeCCCCcEEEe
Q 047816 301 SGTTYAYLPEAAFLAFKDAIMSELQSLKQIRGPDPNYNDICFSGAPSDVSQLSDTFPAVEMAFGNGQKLLLAPENYLFRH 380 (620)
Q Consensus 301 SGtt~~~LP~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~~~~yi~~~ 380 (620)
|||++++||++++++|.+++.+. . ..+.|..+|+. .+.+|+|+|+| +|.+++||+++|+++.
T Consensus 215 SGTt~~~lp~~~~~~l~~~~~~~-~-------~~g~~~~~C~~---------~~~~P~i~f~f-~g~~~~i~~~~y~~~~ 276 (324)
T 1am5_A 215 TGTSKIVAPVSALANIMKDIGAS-E-------NQGEMMGNCAS---------VQSLPDITFTI-NGVKQPLPPSAYIEGD 276 (324)
T ss_dssp TTCSSEEECTTTHHHHHHHHTCE-E-------CCCCEECCTTS---------SSSSCCEEEEE-TTEEEEECHHHHEEES
T ss_pred cCCccEECCHHHHHHHHHHhCCc-c-------cCCcEEEeCCC---------cccCCcEEEEE-CCEEEEECHHHhcccC
Confidence 99999999999999999998554 1 23456778853 14789999999 8899999999999875
Q ss_pred cccCCeEEEEEEecC-----CCCceeehHhhhceEEEEEeCCCCEEEEEecC
Q 047816 381 SKVRGAYCLGIFQNG-----RDPTTLLGGIIVRNTLVMYDREHSKIGFWKTN 427 (620)
Q Consensus 381 ~~~~~~~Cl~~~~~~-----~~~~~ILG~~fLr~~yvvfD~en~rIGfA~~~ 427 (620)
+..|+..+... .++.||||+.|||++|+|||++++|||||+++
T Consensus 277 ----~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 277 ----QAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp ----SSCEEECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred ----CCeEEEEEEECccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 45798544432 24689999999999999999999999999974
No 15
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=9.7e-53 Score=451.27 Aligned_cols=340 Identities=22% Similarity=0.391 Sum_probs=268.4
Q ss_pred ceeeeeccCCccceeEEEEEEecCCCcEEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCcccccccCcCC-cc---
Q 047816 71 NARMRLYDDLLLNGYYTTRLWIGTPPQTFALIVDTGSTVTYVPCATCEHCGDHQDPKFEPDLSSTYQPVKCNLY-CN--- 146 (620)
Q Consensus 71 ~~~~~l~~~~~~~~~Y~~~i~iGTP~Q~~~v~vDTGSs~~WV~~~~c~~C~~~~~~~y~p~~SsT~~~~~c~~~-c~--- 146 (620)
...+|++.|. .+++|+++|.||||+|++.|++||||+++||+|..| .+|+||+.+.|.+. |.
T Consensus 8 ~~~~pv~~d~-~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c-------------~~Sst~~~v~C~s~~C~~~~ 73 (413)
T 3vla_A 8 ALVVPVKKDA-STLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN-------------YVSSTYRPVRCRTSQCSLSG 73 (413)
T ss_dssp EEEEEEEECT-TTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS-------------CCCTTCEECBTTSHHHHHTT
T ss_pred cEEEEeeecC-CCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC-------------CCCCCcCccCCCcccccccc
Confidence 3456777775 577899999999999999999999999999998765 26888888888763 51
Q ss_pred ---cC---C------CCCcceeEEee-ccCCceeEEEEEEEEEeCCCC------CCCccceEEEEEEeccCCCcCCCcce
Q 047816 147 ---CD---R------ERAQCVYERKY-AEMSSSSGVLGEDIISFGNES------DLKPQRAVFGCENVETGDLYSQHADG 207 (620)
Q Consensus 147 ---c~---~------~~~~~~~~~~Y-~dg~~~~G~~~~D~v~lg~~~------~~~~~~~~fg~~~~~~~~~~~~~~dG 207 (620)
|. . ..+.|.|.+.| +|++.+.|++++|+|+|+... .+.+.++.|||+..+.........||
T Consensus 74 ~~~~~~c~s~~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~~~~dG 153 (413)
T 3vla_A 74 SIACGDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLASGVVG 153 (413)
T ss_dssp CCEEECCSSCCBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSCTTCCE
T ss_pred cCCCcccccCCCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCccccccc
Confidence 31 1 13569999999 588899999999999997321 14678999999988632212346899
Q ss_pred EEecCCCCCchHHHHHHcCCcccceEEeecCCCCCCceEEECCCCCC--------CC-ceEeecCCCC------------
Q 047816 208 IIGLGRGDLSVVDQLVEKGVISDSFSLCYGGMDVGGGAMVLGGISPP--------KD-MVFTHSDPVR------------ 266 (620)
Q Consensus 208 IlGLg~~~~s~~~~L~~~g~I~~~FSl~l~~~~~~~G~l~fGgiD~~--------~~-~~~~~~~~~~------------ 266 (620)
|||||++.+|++.||.++++|+++||+||.+....+|.|+|||+|.. .. +.|+++....
T Consensus 154 IlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~ 233 (413)
T 3vla_A 154 MAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEP 233 (413)
T ss_dssp EEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCC
T ss_pred ccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCC
Confidence 99999999999999999999989999999986567899999999863 24 7777765421
Q ss_pred CCeeEEEEeEEEEccEEecCCCCccC----CCCceEeeccceeeeecHHHHHHHHHHHHHHhh--hcccccCCCCCCccc
Q 047816 267 SPYYNIDLKVIHVAGKPLPLNPKVFD----GKHGTVLDSGTTYAYLPEAAFLAFKDAIMSELQ--SLKQIRGPDPNYNDI 340 (620)
Q Consensus 267 ~~~w~v~l~~i~v~g~~~~~~~~~~~----~~~~ailDSGtt~~~LP~~~~~~i~~~l~~~~~--~~~~~~~~~~~~~~~ 340 (620)
..+|.|.|++|+|+++.+.++...+. +...+||||||++++||++++++|.++|.+++. .+.... ...+.+.
T Consensus 234 ~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~--~~~~~~~ 311 (413)
T 3vla_A 234 SVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVA--SVAPFGA 311 (413)
T ss_dssp CCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEEC--CCTTCSC
T ss_pred CceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCC--CCCCCcc
Confidence 26999999999999999987765553 456899999999999999999999999998875 222222 1234678
Q ss_pred cccCCCCCccccCCCCCeEEEEECC-CcEEEeCCCCcEEEecccCCeEEEEEEecCC--CCceeehHhhhceEEEEEeCC
Q 047816 341 CFSGAPSDVSQLSDTFPAVEMAFGN-GQKLLLAPENYLFRHSKVRGAYCLGIFQNGR--DPTTLLGGIIVRNTLVMYDRE 417 (620)
Q Consensus 341 C~~~~~~~~~~~~~~~P~i~f~f~~-g~~~~l~~~~yi~~~~~~~~~~Cl~~~~~~~--~~~~ILG~~fLr~~yvvfD~e 417 (620)
|+........+....+|+|+|+|++ +++|+|++++|+++... +..|++++.... .+.||||+.|||++|+|||++
T Consensus 312 C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~--~~~Cl~~~~~~~~~~~~~IlGd~fl~~~~vvfD~~ 389 (413)
T 3vla_A 312 CFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIND--NVVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLA 389 (413)
T ss_dssp EEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEET--TEEEECEEEEESSCSSSEEECHHHHTTEEEEEETT
T ss_pred eeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCC--CcEEEEEEecCCCcccceeEehhhhcCeEEEEECC
Confidence 9865432211223479999999954 48999999999998643 678998876543 268999999999999999999
Q ss_pred CCEEEEEecCC
Q 047816 418 HSKIGFWKTNC 428 (620)
Q Consensus 418 n~rIGfA~~~c 428 (620)
|+|||||++.+
T Consensus 390 ~~riGfa~~~~ 400 (413)
T 3vla_A 390 TSRVGFSGTLL 400 (413)
T ss_dssp TTEEEEEEEGG
T ss_pred CCEEEEEEecc
Confidence 99999997543
No 16
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=3.5e-53 Score=442.85 Aligned_cols=303 Identities=18% Similarity=0.273 Sum_probs=249.6
Q ss_pred ccceeEEEEEEecCCCcEEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCcccccccCcCCcccCCCCCcceeEEee
Q 047816 81 LLNGYYTTRLWIGTPPQTFALIVDTGSTVTYVPCATCEHCGDHQDPKFEPDLSSTYQPVKCNLYCNCDRERAQCVYERKY 160 (620)
Q Consensus 81 ~~~~~Y~~~i~iGTP~Q~~~v~vDTGSs~~WV~~~~c~~C~~~~~~~y~p~~SsT~~~~~c~~~c~c~~~~~~~~~~~~Y 160 (620)
..+++|+++|.||||+|++.|++||||+++||+|..|..|..+.++.|+|++|+||+.+.| |.|.+.|
T Consensus 12 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~~~~~y~~~~SsT~~~~~~------------~~~~i~Y 79 (329)
T 3c9x_A 12 SADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPKSSATGHAIYTPSKSSTSKKVSG------------ASWSISY 79 (329)
T ss_dssp TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCHHHHTTSCCBCGGGCTTCEECTT------------CBEEEEC
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCCccccCCCCcCCcccCcCceEcCC------------CeEEEEe
Confidence 3567899999999999999999999999999999999987655558999999999998642 6899999
Q ss_pred ccCCceeEEEEEEEEEeCCCCCCCccceEEEEEEeccCCCcC-CCcceEEecCCCCC---------chHHHHHHcCCcc-
Q 047816 161 AEMSSSSGVLGEDIISFGNESDLKPQRAVFGCENVETGDLYS-QHADGIIGLGRGDL---------SVVDQLVEKGVIS- 229 (620)
Q Consensus 161 ~dg~~~~G~~~~D~v~lg~~~~~~~~~~~fg~~~~~~~~~~~-~~~dGIlGLg~~~~---------s~~~~L~~~g~I~- 229 (620)
++|+.+.|.+++|+|+|++ ++++++.|||+...++.+.. ...+||||||++.. +++++|+++ |.
T Consensus 80 g~Gs~~~G~~~~D~v~ig~---~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~ 154 (329)
T 3c9x_A 80 GDGSSSSGDVYTDKVTIGG---FSVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSNAASS--LAE 154 (329)
T ss_dssp TTSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHHTT--SSS
T ss_pred CCCCcEEEEEEEEEEEECC---EEEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHHHHHHHh--cCC
Confidence 9987799999999999998 67889999999987654332 46799999998643 489999986 65
Q ss_pred cceEEeecCCCCCCceEEECCCCCCC---CceEeecCCCCCCeeEEEEeEEEEccEEecCCCCccCCCCceEeeccceee
Q 047816 230 DSFSLCYGGMDVGGGAMVLGGISPPK---DMVFTHSDPVRSPYYNIDLKVIHVAGKPLPLNPKVFDGKHGTVLDSGTTYA 306 (620)
Q Consensus 230 ~~FSl~l~~~~~~~G~l~fGgiD~~~---~~~~~~~~~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~~ailDSGtt~~ 306 (620)
+.||+||++ ...|.|+|||+|+++ .+.|+++.+ ...+|.|.+++|+|+++.+. .....++|||||+++
T Consensus 155 ~~FS~~l~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~-~~~~~~v~l~~i~v~~~~~~------~~~~~aiiDSGTt~~ 225 (329)
T 3c9x_A 155 PLFTADLRH--GQNGSYNFGYIDTSVAKGPVAYTPVDN-SQGFWEFTASGYSVGGGKLN------RNSIDGIADTGTTLL 225 (329)
T ss_dssp SEEEEECCS--SSCEEEEESSCCGGGCSSCEEEEECBC-TTSSCEEEECCEEETTCCCC------SCCEEEEECTTCCSE
T ss_pred CEEEEEecC--CCCcEEEEeCcChhhcccceEEEEccC-CCceEEEEEeeEEECCEecc------CCCceEEEECCCCcE
Confidence 899999986 357999999999987 345665543 46799999999999998653 234589999999999
Q ss_pred eecHHHHHHHHHHHHHHhhhcccccCCCCCCccccccCCCCCccccCCCCCeEEEEECCCcEEEeCCCCcEEEecccCCe
Q 047816 307 YLPEAAFLAFKDAIMSELQSLKQIRGPDPNYNDICFSGAPSDVSQLSDTFPAVEMAFGNGQKLLLAPENYLFRHSKVRGA 386 (620)
Q Consensus 307 ~LP~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~~~~yi~~~~~~~~~ 386 (620)
+||++++++|.+++.+.. .....+.|.++|+ ..+|+|+|+| +|.++.||+++|++.....+..
T Consensus 226 ~lp~~~~~~i~~~i~~a~-----~~~~~~~~~~~C~-----------~~~P~i~f~f-~g~~~~ip~~~~~~~~~~~~~~ 288 (329)
T 3c9x_A 226 LLDDNVVDAYYANVQSAQ-----YDNQQEGVVFDCD-----------EDLPSFSFGV-GSSTITIPGDLLNLTPLEEGSS 288 (329)
T ss_dssp EECHHHHHHHHTTCTTCE-----EETTTTEEEEETT-----------CCCCCEEEEE-TTEEEEECGGGGEEEESSTTCS
T ss_pred eCCHHHHHHHHHhCCCcE-----EcCCCCEEEEECC-----------CCCCcEEEEE-CCEEEEECHHHeeeeccCCCCC
Confidence 999999999988873321 1112345667884 4689999999 7899999999999876433347
Q ss_pred EEEEEEec-CCCCceeehHhhhceEEEEEeCCCCEEEEEec
Q 047816 387 YCLGIFQN-GRDPTTLLGGIIVRNTLVMYDREHSKIGFWKT 426 (620)
Q Consensus 387 ~Cl~~~~~-~~~~~~ILG~~fLr~~yvvfD~en~rIGfA~~ 426 (620)
.|++.++. ...+.||||+.|||++|+|||++|+|||||+.
T Consensus 289 ~C~~~i~~~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 289 TCFGGLQSSSGIGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp EEEESEEECTTTTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred eEEEEEEcCCCCCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 89875544 33578999999999999999999999999973
No 17
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=5.9e-53 Score=441.16 Aligned_cols=302 Identities=20% Similarity=0.320 Sum_probs=249.0
Q ss_pred ccceeEEEEEEecCCCcEEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCcccccccCcCCcccCCCCCcceeEEee
Q 047816 81 LLNGYYTTRLWIGTPPQTFALIVDTGSTVTYVPCATCEHCGDHQDPKFEPDLSSTYQPVKCNLYCNCDRERAQCVYERKY 160 (620)
Q Consensus 81 ~~~~~Y~~~i~iGTP~Q~~~v~vDTGSs~~WV~~~~c~~C~~~~~~~y~p~~SsT~~~~~c~~~c~c~~~~~~~~~~~~Y 160 (620)
..+++|+++|.||||+|++.|++||||+++||+|..|..|.. .++.|+|++|+||+.+.| |.|.+.|
T Consensus 12 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~-~~~~y~~~~SsT~~~~~~------------~~~~i~Y 78 (329)
T 1oew_A 12 SLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEV-XQTIYTPSKSTTAKLLSG------------ATWSISY 78 (329)
T ss_dssp TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCGGGC--CCCBCGGGCTTCEEEEE------------EEEEEEC
T ss_pred CCCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCCcccc-ccCccCCccCccceecCC------------CeEEEEe
Confidence 356789999999999999999999999999999999998765 457999999999998642 6899999
Q ss_pred ccCCceeEEEEEEEEEeCCCCCCCccceEEEEEEeccCCCcC-CCcceEEecCCCCC---------chHHHHHHcCCcc-
Q 047816 161 AEMSSSSGVLGEDIISFGNESDLKPQRAVFGCENVETGDLYS-QHADGIIGLGRGDL---------SVVDQLVEKGVIS- 229 (620)
Q Consensus 161 ~dg~~~~G~~~~D~v~lg~~~~~~~~~~~fg~~~~~~~~~~~-~~~dGIlGLg~~~~---------s~~~~L~~~g~I~- 229 (620)
++|+.+.|.+++|+|++++ +++.++.|||++...+.+.. ...+||||||++.. +++++|+++ |.
T Consensus 79 g~Gs~~~G~~~~D~v~~g~---~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~ 153 (329)
T 1oew_A 79 GDGSSSSGDVYTDTVSVGG---LTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAKAS--LDS 153 (329)
T ss_dssp TTSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHTTT--SSS
T ss_pred CCCCcEEEEEEEEEEEECC---EEEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHHHHHHHh--ccC
Confidence 9977799999999999998 67899999999987654332 46799999998643 488999987 65
Q ss_pred cceEEeecCCCCCCceEEECCCCCCC---CceEeecCCCCCCeeEEEEeEEEEccEEecCCCCccCCCCceEeeccceee
Q 047816 230 DSFSLCYGGMDVGGGAMVLGGISPPK---DMVFTHSDPVRSPYYNIDLKVIHVAGKPLPLNPKVFDGKHGTVLDSGTTYA 306 (620)
Q Consensus 230 ~~FSl~l~~~~~~~G~l~fGgiD~~~---~~~~~~~~~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~~ailDSGtt~~ 306 (620)
++||+||++ ...|.|+|||+|+++ .+.|+++.+ ...+|.|.+++|+|+++.+. .....++|||||+++
T Consensus 154 ~~FS~~L~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~-~~~~~~v~l~~i~v~~~~~~------~~~~~aiiDSGTt~~ 224 (329)
T 1oew_A 154 PVFTADLGY--HAPGTYNFGFIDTTAYTGSITYTAVST-KQGFWEWTSTGYAVGSGTFK------STSIDGIADTGTTLL 224 (329)
T ss_dssp SEEEEECCS--SSCEEEEESCCCTTSSSSCCEEEECBC-TTSSCEEEEEEEEETTSCCE------EEEEEEEECTTCCSE
T ss_pred cEEEEEccC--CCCeEEEEeccChHhcccceEEEEccC-CCceEEEEEeeEEECCeecc------CCCceEEEeCCCCCE
Confidence 899999986 357999999999987 455666543 46799999999999987553 234579999999999
Q ss_pred eecHHHHHHHHHHHHHHhhhcccccCCCCCCccccccCCCCCccccCCCCCeEEEEECCCcEEEeCCCCcEEEecccCCe
Q 047816 307 YLPEAAFLAFKDAIMSELQSLKQIRGPDPNYNDICFSGAPSDVSQLSDTFPAVEMAFGNGQKLLLAPENYLFRHSKVRGA 386 (620)
Q Consensus 307 ~LP~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~~~~yi~~~~~~~~~ 386 (620)
+||++++++|++++.+.. .....+.|..+|+ ..+|+|+|+| +|.++.||+++|++.....+..
T Consensus 225 ~lP~~~~~~l~~~i~~a~-----~~~~~g~~~~~C~-----------~~~P~i~f~f-gg~~~~ip~~~~~~~~~~~~~~ 287 (329)
T 1oew_A 225 YLPATVVSAYWAQVSGAK-----SSSSVGGYVFPCS-----------ATLPSFTFGV-GSARIVIPGDYIDFGPISTGSS 287 (329)
T ss_dssp EECHHHHHHHHTTSTTCE-----EETTTTEEEEETT-----------CCCCCEEEEE-TTEEEEECHHHHEEEESSTTCS
T ss_pred ECCHHHHHHHHHhCCCcE-----EcCCCCEEEEECC-----------CCCCcEEEEE-CCEEEEECHHHeeeeecCCCCC
Confidence 999999999988873321 1122345667884 4689999999 8999999999999876433346
Q ss_pred EEEEEEec-CCCCceeehHhhhceEEEEEeC-CCCEEEEEec
Q 047816 387 YCLGIFQN-GRDPTTLLGGIIVRNTLVMYDR-EHSKIGFWKT 426 (620)
Q Consensus 387 ~Cl~~~~~-~~~~~~ILG~~fLr~~yvvfD~-en~rIGfA~~ 426 (620)
.|++.++. ...+.||||+.|||++|+|||+ +|+|||||+.
T Consensus 288 ~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 288 SCFGGIQSSAGIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp EEEESEEESTTTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred eEEEEEEeCCCCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 89875554 3357899999999999999999 9999999973
No 18
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=6.8e-53 Score=440.88 Aligned_cols=300 Identities=25% Similarity=0.500 Sum_probs=250.7
Q ss_pred cceeEEEEEEecCCCcEEEEEEeCCCCceeEeCCCCC--CCCCCCCCCCCCCCCcccccccCcCCcccCCCCCcceeEEe
Q 047816 82 LNGYYTTRLWIGTPPQTFALIVDTGSTVTYVPCATCE--HCGDHQDPKFEPDLSSTYQPVKCNLYCNCDRERAQCVYERK 159 (620)
Q Consensus 82 ~~~~Y~~~i~iGTP~Q~~~v~vDTGSs~~WV~~~~c~--~C~~~~~~~y~p~~SsT~~~~~c~~~c~c~~~~~~~~~~~~ 159 (620)
.+++|+++|.||||+|++.|++||||+++||+|..|. .|..+ +.|+|++|+||+..+ |.|.+.
T Consensus 10 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~--~~y~~~~SsT~~~~~-------------~~~~i~ 74 (329)
T 1htr_B 10 MDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTSH--SRFNPSESSTYSTNG-------------QTFSLQ 74 (329)
T ss_dssp TTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTS--CCBCGGGCTTCEEEE-------------EEEEEE
T ss_pred cCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCCcccCCC--CcCCCccCCCeEECC-------------cEEEEE
Confidence 3668999999999999999999999999999999997 48765 799999999999876 689999
Q ss_pred eccCCceeEEEEEEEEEeCCCCCCCccceEEEEEEeccCC-CcCCCcceEEecCCCCC------chHHHHHHcCCcc-cc
Q 047816 160 YAEMSSSSGVLGEDIISFGNESDLKPQRAVFGCENVETGD-LYSQHADGIIGLGRGDL------SVVDQLVEKGVIS-DS 231 (620)
Q Consensus 160 Y~dg~~~~G~~~~D~v~lg~~~~~~~~~~~fg~~~~~~~~-~~~~~~dGIlGLg~~~~------s~~~~L~~~g~I~-~~ 231 (620)
|++| ++.|.+++|+|++++ +++.++.|||+....+. +.....+||||||++.. +++++|++||+|. +.
T Consensus 75 Yg~g-s~~G~~~~D~v~~g~---~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~ 150 (329)
T 1htr_B 75 YGSG-SLTGFFGYDTLTVQS---IQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGMVQEGALTSPV 150 (329)
T ss_dssp ETTE-EEEEEEEEEEEEETT---EEEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCSHHHHHHHTTCSSSSE
T ss_pred eCCC-CeEEEEEeeeEEEcc---eEECceEEEEEEEccccccccCCCceEEecCCCcccccCCCCHHHHHHhcCCCCCCE
Confidence 9985 469999999999998 77899999999887653 33456899999999865 5899999999997 89
Q ss_pred eEEeecCCCCC-CceEEECCCCCCCC---ceEeecCCCCCCeeEEEEeEEEEccEEecCCCCccCCCCceEeeccceeee
Q 047816 232 FSLCYGGMDVG-GGAMVLGGISPPKD---MVFTHSDPVRSPYYNIDLKVIHVAGKPLPLNPKVFDGKHGTVLDSGTTYAY 307 (620)
Q Consensus 232 FSl~l~~~~~~-~G~l~fGgiD~~~~---~~~~~~~~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~~ailDSGtt~~~ 307 (620)
||+||++.+.. +|.|+|||+|++++ +.|++. ....+|.|.+++|+|+++.+.. ......++|||||++++
T Consensus 151 Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~--~~~~~~~v~l~~i~v~~~~~~~----~~~~~~aiiDSGTt~~~ 224 (329)
T 1htr_B 151 FSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPV--TQELYWQIGIEEFLIGGQASGW----CSEGCQAIVDTGTSLLT 224 (329)
T ss_dssp EEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEB--CSSSSCEEEECEEEETTEECCT----TTTCEEEEECTTCCSEE
T ss_pred EEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEEC--CCCceEEEEEeEEEECCceeee----cCCCceEEEecCCccEE
Confidence 99999986444 79999999999873 445544 3567999999999999987542 12346899999999999
Q ss_pred ecHHHHHHHHHHHHHHhhhcccccCCCCCCccccccCCCCCccccCCCCCeEEEEECCCcEEEeCCCCcEEEecccCCeE
Q 047816 308 LPEAAFLAFKDAIMSELQSLKQIRGPDPNYNDICFSGAPSDVSQLSDTFPAVEMAFGNGQKLLLAPENYLFRHSKVRGAY 387 (620)
Q Consensus 308 LP~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~~~~yi~~~~~~~~~~ 387 (620)
||++++++|.+++.+... ..+.|..+|+. .+.+|+|+|+| +|.+++||+++|+++.. + .
T Consensus 225 lp~~~~~~l~~~~~~~~~-------~~g~~~~~C~~---------~~~~P~i~f~f-~g~~~~i~~~~y~~~~~---g-~ 283 (329)
T 1htr_B 225 VPQQYMSALLQATGAQED-------EYGQFLVNCNS---------IQNLPSLTFII-NGVEFPLPPSSYILSNN---G-Y 283 (329)
T ss_dssp EEGGGHHHHHHHHTCEEC-------TTSCEEECGGG---------GGGSCCEEEEE-TTEEEEECHHHHEEECS---S-C
T ss_pred CCHHHHHHHHHHhCCeec-------CCCeEEEeCCC---------cccCCcEEEEE-CCEEEEECHHHhcccCC---C-E
Confidence 999999999999865421 23456778853 14689999999 88999999999999764 3 8
Q ss_pred EEE-EEecC----CCC-ceeehHhhhceEEEEEeCCCCEEEEEecC
Q 047816 388 CLG-IFQNG----RDP-TTLLGGIIVRNTLVMYDREHSKIGFWKTN 427 (620)
Q Consensus 388 Cl~-~~~~~----~~~-~~ILG~~fLr~~yvvfD~en~rIGfA~~~ 427 (620)
|+. +.... .++ .||||+.|||++|+|||++++|||||+++
T Consensus 284 C~~~~~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 284 CTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp EEESEEEECCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEEEEECCCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 985 44322 234 79999999999999999999999999874
No 19
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=6.8e-53 Score=447.66 Aligned_cols=304 Identities=25% Similarity=0.382 Sum_probs=254.1
Q ss_pred eeeeccCCccceeEEEEEEecCCCcEEEEEEeCCCCceeEeCCCCC--CCCCCCCCCCCCCCCcccccccCcCCcccCCC
Q 047816 73 RMRLYDDLLLNGYYTTRLWIGTPPQTFALIVDTGSTVTYVPCATCE--HCGDHQDPKFEPDLSSTYQPVKCNLYCNCDRE 150 (620)
Q Consensus 73 ~~~l~~~~~~~~~Y~~~i~iGTP~Q~~~v~vDTGSs~~WV~~~~c~--~C~~~~~~~y~p~~SsT~~~~~c~~~c~c~~~ 150 (620)
.+++.+ ..+++|+++|.||||+|++.|++||||+++||+|..|. .|..+ +.|+|++|+||+..+
T Consensus 53 ~~pl~~--~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~--~~y~~~~SsT~~~~~---------- 118 (375)
T 1miq_A 53 VIELDD--VANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCSIK--NLYDSSKSKSYEKDG---------- 118 (375)
T ss_dssp CCCGGG--TBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGGGGS--CCBCGGGCTTCEEEE----------
T ss_pred eEEccc--CCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCCcccccCC--CcCCCccCCceEECC----------
Confidence 356664 34778999999999999999999999999999999997 67765 799999999999876
Q ss_pred CCcceeEEeeccCCceeEEEEEEEEEeCCCCCCCccceEEEEEEe----ccCCCcCCCcceEEecCCCCC------chHH
Q 047816 151 RAQCVYERKYAEMSSSSGVLGEDIISFGNESDLKPQRAVFGCENV----ETGDLYSQHADGIIGLGRGDL------SVVD 220 (620)
Q Consensus 151 ~~~~~~~~~Y~dg~~~~G~~~~D~v~lg~~~~~~~~~~~fg~~~~----~~~~~~~~~~dGIlGLg~~~~------s~~~ 220 (620)
|.|.+.|++|+ +.|.+++|+|++|+ +++.+ .|||+.. +. .+.....+||||||++.. ++++
T Consensus 119 ---~~~~i~Yg~Gs-~~G~~~~Dtv~ig~---~~v~~-~Fg~~~~~~~~~~-~f~~~~~dGilGLg~~~~s~~~~~~~~~ 189 (375)
T 1miq_A 119 ---TKVDITYGSGT-VKGFFSKDLVTLGH---LSMPY-KFIEVTDTDDLEP-IYSSVEFDGILGLGWKDLSIGSIDPIVV 189 (375)
T ss_dssp ---EEEEEEETTEE-EEEEEEEEEEEETT---EEEEE-EEEEEEECGGGTT-HHHHSCCCEEEECSSCCTTCSSCCCHHH
T ss_pred ---cEEEEEeCCCe-EEEEEEEEEEEEcC---ceECc-EEEEEEecccccc-ccccCCCceEEeCCCCcccccCCCCHHH
Confidence 68999999955 89999999999998 67788 9999998 44 333456899999999764 5899
Q ss_pred HHHHcCCcc-cceEEeecCCCCCCceEEECCCCCCCC---ceEeecCCCCCCeeEEEEeEEEEccEEecCCCCccCCCCc
Q 047816 221 QLVEKGVIS-DSFSLCYGGMDVGGGAMVLGGISPPKD---MVFTHSDPVRSPYYNIDLKVIHVAGKPLPLNPKVFDGKHG 296 (620)
Q Consensus 221 ~L~~~g~I~-~~FSl~l~~~~~~~G~l~fGgiD~~~~---~~~~~~~~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~~ 296 (620)
+|++||+|+ +.||+||++.+..+|.|+|||+|++++ +.|+++ ....+|.|.++ |+|+++.+ ....
T Consensus 190 ~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~--~~~~~w~v~l~-i~v~g~~~--------~~~~ 258 (375)
T 1miq_A 190 ELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKL--NHDLYWQIDLD-VHFGKQTM--------EKAN 258 (375)
T ss_dssp HHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEB--SSSSSSEEEEE-EEETTEEE--------EEEE
T ss_pred HHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEec--CCCceEEEEEE-EEECCEEc--------ccce
Confidence 999999998 899999998655689999999999873 345544 35689999999 99999876 2357
Q ss_pred eEeeccceeeeecHHHHHHHHHHHHHHhhhcccccCCCCCCccccccCCCCCccccCCCCCeEEEEECCCcEEEeCCCCc
Q 047816 297 TVLDSGTTYAYLPEAAFLAFKDAIMSELQSLKQIRGPDPNYNDICFSGAPSDVSQLSDTFPAVEMAFGNGQKLLLAPENY 376 (620)
Q Consensus 297 ailDSGtt~~~LP~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~~~~y 376 (620)
++|||||++++||++++++|.+++.+.+. ...+.|.++|+. +.+|+|+|+| +|.+|+||+++|
T Consensus 259 aiiDSGTs~~~lP~~~~~~l~~~~~~~~~------~~~g~~~~~C~~----------~~~P~i~f~f-~g~~~~l~~~~y 321 (375)
T 1miq_A 259 VIVDSGTTTITAPSEFLNKFFANLNVIKV------PFLPFYVTTCDN----------KEMPTLEFKS-ANNTYTLEPEYY 321 (375)
T ss_dssp EEECTTBSSEEECHHHHHHHHHHHTCEEC------TTSSCEEEETTC----------TTCCCEEEEC-SSCEEEECGGGS
T ss_pred EEecCCCccEEcCHHHHHHHHHHhCCccc------CCCCeEEEECCC----------CCCCcEEEEE-CCEEEEECHHHh
Confidence 99999999999999999999999865421 233457788942 4689999999 789999999999
Q ss_pred EEEecccCCeEEEEEEecCC--CCceeehHhhhceEEEEEeCCCCEEEEEecC
Q 047816 377 LFRHSKVRGAYCLGIFQNGR--DPTTLLGGIIVRNTLVMYDREHSKIGFWKTN 427 (620)
Q Consensus 377 i~~~~~~~~~~Cl~~~~~~~--~~~~ILG~~fLr~~yvvfD~en~rIGfA~~~ 427 (620)
+++....+...|+..+...+ ++.||||++|||++|+|||++++|||||+++
T Consensus 322 i~~~~~~g~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 322 MNPILEVDDTLCMITMLPVDIDSNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp EEESSSSSCSEEEESEEECCSSSSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EeeccCCCCCeEEEEEEECCCCCCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 99865434568984444433 2689999999999999999999999999874
No 20
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=5.5e-53 Score=456.30 Aligned_cols=305 Identities=21% Similarity=0.319 Sum_probs=257.0
Q ss_pred eeeeeccCCccceeEEEEEEecCCCcEEEEEEeCCCCceeEeCCCCC--CCCCCCCCCCCCCCCcccccccCcCCcccCC
Q 047816 72 ARMRLYDDLLLNGYYTTRLWIGTPPQTFALIVDTGSTVTYVPCATCE--HCGDHQDPKFEPDLSSTYQPVKCNLYCNCDR 149 (620)
Q Consensus 72 ~~~~l~~~~~~~~~Y~~~i~iGTP~Q~~~v~vDTGSs~~WV~~~~c~--~C~~~~~~~y~p~~SsT~~~~~c~~~c~c~~ 149 (620)
..+++.+. .+..|+++|+||||||++.|++||||+++||+|..|. .|..+ +.|+|++|+||+..+
T Consensus 127 ~~~pL~n~--~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C~~~--~~ydps~SsT~~~~~--------- 193 (451)
T 3qvc_A 127 DNVELKDL--ANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESCESK--NHYDSSKSKTYEKDD--------- 193 (451)
T ss_dssp CCCCGGGG--BCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGGTTS--CCBCGGGCTTCEEEE---------
T ss_pred Cccceeec--CCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCccccCCC--CCCCCCCCcccccCC---------
Confidence 34566553 3778999999999999999999999999999999994 78766 799999999999876
Q ss_pred CCCcceeEEeeccCCceeEEEEEEEEEeCCCCCCCccceEEEEEEe----ccCCCcCCCcceEEecCCCCC------chH
Q 047816 150 ERAQCVYERKYAEMSSSSGVLGEDIISFGNESDLKPQRAVFGCENV----ETGDLYSQHADGIIGLGRGDL------SVV 219 (620)
Q Consensus 150 ~~~~~~~~~~Y~dg~~~~G~~~~D~v~lg~~~~~~~~~~~fg~~~~----~~~~~~~~~~dGIlGLg~~~~------s~~ 219 (620)
+.|.+.|++|+ +.|.+++|+|++|+ +++. +.|||+.. ..+ +.....+||||||++.. +++
T Consensus 194 ----~~f~i~YgdGs-~~G~~~~Dtv~igg---~~v~-~~Fg~a~~t~~~~~~-f~~~~~dGILGLg~~~~s~~~~~~~~ 263 (451)
T 3qvc_A 194 ----TPVKLTSKAGT-ISGIFSKDLVTIGK---LSVP-YKFIEMTEIVGFEPF-YSESDVDGVFGLGWKDLSIGSIDPYI 263 (451)
T ss_dssp ----EEEEEECSSEE-EEEEEEEEEEEETT---EEEE-EEEEEEEEEEECTTH-HHHSCCCEEEECSSBCSSSSCCCCHH
T ss_pred ----CEEEEEECCCE-EEEEEEEEEEEECC---EEEE-EEEEEEEeccccCCC-ccCCCCCEEEecCCCcccccCCCCHH
Confidence 68999999966 99999999999998 6778 99999988 554 44456799999999764 689
Q ss_pred HHHHHcCCcc-cceEEeecCCCCCCceEEECCCCCCCC---ceEeecCCCCCCeeEEEEeEEEEccEEecCCCCccCCCC
Q 047816 220 DQLVEKGVIS-DSFSLCYGGMDVGGGAMVLGGISPPKD---MVFTHSDPVRSPYYNIDLKVIHVAGKPLPLNPKVFDGKH 295 (620)
Q Consensus 220 ~~L~~~g~I~-~~FSl~l~~~~~~~G~l~fGgiD~~~~---~~~~~~~~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~ 295 (620)
++|++||+|+ +.||+||++.+..+|.|+|||+|++++ +.|+++ ....+|.|.++ |+|+++ . ....
T Consensus 264 ~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv--~~~~~w~v~l~-I~Vgg~-~-------~~~~ 332 (451)
T 3qvc_A 264 VELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKL--NHDLMWQVDLD-VHFGNV-S-------SKKA 332 (451)
T ss_dssp HHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEC--SSTTSSEEEEE-EEETTE-E-------EEEE
T ss_pred HHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEc--ccCCeeEEEEE-EEECCc-c-------CCCc
Confidence 9999999998 899999998766689999999999984 344443 36789999999 999987 1 2345
Q ss_pred ceEeeccceeeeecHHHHHHHHHHHHHHhhhcccccCCCCCCccccccCCCCCccccCCCCCeEEEEECCCcEEEeCCCC
Q 047816 296 GTVLDSGTTYAYLPEAAFLAFKDAIMSELQSLKQIRGPDPNYNDICFSGAPSDVSQLSDTFPAVEMAFGNGQKLLLAPEN 375 (620)
Q Consensus 296 ~ailDSGtt~~~LP~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~~~~ 375 (620)
.++|||||+++++|++++++|.+++++... ...+.|..+|. .+.+|+|+|+| +|.+++||+++
T Consensus 333 ~aiiDSGTt~i~lP~~~~~~i~~~i~a~~~------~~~g~y~v~C~----------~~~~P~itf~f-gg~~i~lp~~~ 395 (451)
T 3qvc_A 333 NVILDSATSVITVPTEFFNQFVESASVFKV------PFLSLYVTTCG----------NTKLPTLEYRS-PNKVYTLEPKQ 395 (451)
T ss_dssp EEEECTTBSSEEECHHHHHHHHTTTTCEEC------TTSSCEEEETT----------CTTCCCEEEEE-TTEEEEECHHH
T ss_pred eEEEeCCCccccCCHHHHHHHHHHcCCeec------CCCCeEEeeCC----------cCcCCcEEEEE-CCEEEEEcHHH
Confidence 799999999999999999999998865432 22456778883 25789999999 89999999999
Q ss_pred cEEEecccCCeEEEEEEecCC--CCceeehHhhhceEEEEEeCCCCEEEEEecC
Q 047816 376 YLFRHSKVRGAYCLGIFQNGR--DPTTLLGGIIVRNTLVMYDREHSKIGFWKTN 427 (620)
Q Consensus 376 yi~~~~~~~~~~Cl~~~~~~~--~~~~ILG~~fLr~~yvvfD~en~rIGfA~~~ 427 (620)
|+++..+.++..|+..+...+ ++.||||++|||++|+|||++++|||||+++
T Consensus 396 yi~~~~~~~~~~C~~~i~~~~~~~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 396 YLEPLENIFSALCMLNIVPIDLEKNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp HEEECTTTSTTEEEECEEECCCSTTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred heeecccCCCCeEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 999876545578976555544 5789999999999999999999999999975
No 21
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=3.9e-52 Score=453.60 Aligned_cols=325 Identities=24% Similarity=0.370 Sum_probs=253.5
Q ss_pred ceeEEEEEEecCCCcEEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCcccccccCcCCcccCCCCCcceeEEeecc
Q 047816 83 NGYYTTRLWIGTPPQTFALIVDTGSTVTYVPCATCEHCGDHQDPKFEPDLSSTYQPVKCNLYCNCDRERAQCVYERKYAE 162 (620)
Q Consensus 83 ~~~Y~~~i~iGTP~Q~~~v~vDTGSs~~WV~~~~c~~C~~~~~~~y~p~~SsT~~~~~c~~~c~c~~~~~~~~~~~~Y~d 162 (620)
+..|+++|+||||+|+++|+|||||+++||+|..| |..+ +.|+|++|+||+..+ |.|.+.|++
T Consensus 73 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c--c~~~--~~y~~~~SsT~~~~~-------------~~~~i~Yg~ 135 (455)
T 3lpj_A 73 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PFLH--RYYQRQLSSTYRDLR-------------KGVYVPYTQ 135 (455)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TTCS--CCCCGGGCTTCEEEE-------------EEEEEECSS
T ss_pred CCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc--cccC--CcccCCCCCCcccCC-------------ccEEEEeCC
Confidence 44799999999999999999999999999999988 6544 799999999999976 689999999
Q ss_pred CCceeEEEEEEEEEeCCCCCCCccceEEEEEEeccCCCcC-CCcceEEecCCCC--------CchHHHHHHcCCcccceE
Q 047816 163 MSSSSGVLGEDIISFGNESDLKPQRAVFGCENVETGDLYS-QHADGIIGLGRGD--------LSVVDQLVEKGVISDSFS 233 (620)
Q Consensus 163 g~~~~G~~~~D~v~lg~~~~~~~~~~~fg~~~~~~~~~~~-~~~dGIlGLg~~~--------~s~~~~L~~~g~I~~~FS 233 (620)
| ++.|.+++|+|+|++...+. ..+.|+++......+.. ...+||||||++. .+++++|++|++|++.||
T Consensus 136 G-s~~G~~~~Dtv~ig~~~~~~-~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~~~FS 213 (455)
T 3lpj_A 136 G-KWEGELGTDLVSIPHGPNVT-VRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVPNLFS 213 (455)
T ss_dssp C-EEEEEEEEEEEECTTSCSCE-EEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCCSCEE
T ss_pred e-EEEEEEEEEEEEECCCccee-eEEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHHHHccCCCceeE
Confidence 5 56999999999998532121 24678888776655432 5679999999864 368999999999999999
Q ss_pred EeecCC----------CCCCceEEECCCCCCCCce-EeecCCCCCCeeEEEEeEEEEccEEecCCCCccCCCCceEeecc
Q 047816 234 LCYGGM----------DVGGGAMVLGGISPPKDMV-FTHSDPVRSPYYNIDLKVIHVAGKPLPLNPKVFDGKHGTVLDSG 302 (620)
Q Consensus 234 l~l~~~----------~~~~G~l~fGgiD~~~~~~-~~~~~~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~~ailDSG 302 (620)
+||.+. ...+|.|+|||+|++++.+ ..+.+.....+|.|.+++|.|+++.+.++...+ ....++||||
T Consensus 214 ~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~-~~~~aiiDSG 292 (455)
T 3lpj_A 214 LQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEY-NYDKSIVDSG 292 (455)
T ss_dssp EEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGG-GSSCEEECTT
T ss_pred EEeccccccccccccccCCCceEEECCcCcccccCceEEEecCCCceeEEEEeEEEECCEEcccccccc-CCCeEEEECC
Confidence 999753 3457999999999998432 222333356799999999999999887655433 2457999999
Q ss_pred ceeeeecHHHHHHHHHHHHHHhhhcccccCC-CCCCccccccCCCCCccccCCCCCeEEEEECCCc-----EEEeCCCCc
Q 047816 303 TTYAYLPEAAFLAFKDAIMSELQSLKQIRGP-DPNYNDICFSGAPSDVSQLSDTFPAVEMAFGNGQ-----KLLLAPENY 376 (620)
Q Consensus 303 tt~~~LP~~~~~~i~~~l~~~~~~~~~~~~~-~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~-----~~~l~~~~y 376 (620)
|++++||++++++|++++.+..... ..... ...+.++|+...... ...+|+|+|+|+++. +|.|++++|
T Consensus 293 Tt~~~lP~~~~~~i~~~i~~~~~~~-~~~~~~~~g~~~~C~~~~~~~----~~~~P~i~f~f~g~~~~~~~~~~l~~~~y 367 (455)
T 3lpj_A 293 TTNLRLPKKVFEAAVKSIKAASSTE-KFPDGFWLGEQLVCWQAGTTP----WNIFPVISLYLMGEVTNQSFRITILPQQY 367 (455)
T ss_dssp SSSEEEEHHHHHHHHHHHHHHTTTS-CCCHHHHTTCSCEEESTTCCC----GGGSCCEEEEEECSSTTEEEEEEECHHHH
T ss_pred CcceeCCHHHHHHHHHHhhhhcccc-ccCcccccCcceecccccCCc----hhcCCcEEEEEcCCCcCceEEEEECHHHh
Confidence 9999999999999999999875411 11000 023468897543221 135899999995443 599999999
Q ss_pred EEEecccCC--eEEEEEEecCCCCceeehHhhhceEEEEEeCCCCEEEEEecCCcccc
Q 047816 377 LFRHSKVRG--AYCLGIFQNGRDPTTLLGGIIVRNTLVMYDREHSKIGFWKTNCSELW 432 (620)
Q Consensus 377 i~~~~~~~~--~~Cl~~~~~~~~~~~ILG~~fLr~~yvvfD~en~rIGfA~~~c~~~~ 432 (620)
+.+..+.++ ..|+++.....++.||||++|||++|+|||++|+|||||+++|+..+
T Consensus 368 i~~~~~~~~~~~~C~~f~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~ 425 (455)
T 3lpj_A 368 LRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHD 425 (455)
T ss_dssp EEEECCTTCCSCEEEEECEEEESSCEEECHHHHTTEEEEEETTTTEEEEEEETTCCCC
T ss_pred eEeccCCCCCCceEEEEeccCCCCcEEEChHHhCCeEEEEECCCCEEEEEeccccccc
Confidence 998765322 57986322223568999999999999999999999999999998753
No 22
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=2.1e-52 Score=455.82 Aligned_cols=327 Identities=28% Similarity=0.473 Sum_probs=253.8
Q ss_pred eeeeeccCCccceeEEEEEEecCCCcEEEEEEeCCCCceeEeCCCCC---CCCCCCCCCCCCCCCcccccccCcCCcccC
Q 047816 72 ARMRLYDDLLLNGYYTTRLWIGTPPQTFALIVDTGSTVTYVPCATCE---HCGDHQDPKFEPDLSSTYQPVKCNLYCNCD 148 (620)
Q Consensus 72 ~~~~l~~~~~~~~~Y~~~i~iGTP~Q~~~v~vDTGSs~~WV~~~~c~---~C~~~~~~~y~p~~SsT~~~~~c~~~c~c~ 148 (620)
..+++.++ .+++|+++|+||||+|++.|+|||||+++||+|..|. .|..+ +.|+|++|+||+..+
T Consensus 42 ~~~~l~n~--~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~~~~C~~~--~~y~~~~SsT~~~~~-------- 109 (478)
T 1qdm_A 42 DIVALKNY--MNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYLH--SRYKAGASSTYKKNG-------- 109 (478)
T ss_dssp CSGGGCCG--GGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCSCGGGGGS--CCBCGGGCTTCBCCC--------
T ss_pred ceEEeEec--cCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCCCccccCC--CCCCcccCCCeeeCC--------
Confidence 34566654 3678999999999999999999999999999999996 78876 799999999999875
Q ss_pred CCCCcceeEEeeccCCceeEEEEEEEEEeCCCCCCCccceEEEEEEeccCC-CcCCCcceEEecCCCCCc------hHHH
Q 047816 149 RERAQCVYERKYAEMSSSSGVLGEDIISFGNESDLKPQRAVFGCENVETGD-LYSQHADGIIGLGRGDLS------VVDQ 221 (620)
Q Consensus 149 ~~~~~~~~~~~Y~dg~~~~G~~~~D~v~lg~~~~~~~~~~~fg~~~~~~~~-~~~~~~dGIlGLg~~~~s------~~~~ 221 (620)
+.|.+.|++|+ +.|.+++|+|++|+ +.+.++.||++..+.+. |....++||||||++..+ ++++
T Consensus 110 -----~~~~i~Yg~Gs-~~G~~~~Dtv~ig~---~~v~~~~Fg~a~~~~~~~f~~~~~dGIlGLg~~~~s~~~~~p~~~~ 180 (478)
T 1qdm_A 110 -----KPAAIQYGTGS-IAGYFSEDSVTVGD---LVVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVGKAVPVWYK 180 (478)
T ss_dssp -----CEEEEEETTEE-EEEEEEEEEEEETT---EEEEEEEEEEEEECCBSHHHHCSSSEEEECSCGGGCGGGCCCHHHH
T ss_pred -----cEEEEEcCCCC-eEEEEEEEEEEECC---eEECCEEEEEEEecCCcccccccccceecccccccccCCCCcHHHH
Confidence 58999999954 89999999999998 67889999999886543 334567999999998654 7899
Q ss_pred HHHcCCcc-cceEEeecCCC--CCCceEEECCCCCCCC---ceEeecCCCCCCeeEEEEeEEEEccEEecCCCCccCCCC
Q 047816 222 LVEKGVIS-DSFSLCYGGMD--VGGGAMVLGGISPPKD---MVFTHSDPVRSPYYNIDLKVIHVAGKPLPLNPKVFDGKH 295 (620)
Q Consensus 222 L~~~g~I~-~~FSl~l~~~~--~~~G~l~fGgiD~~~~---~~~~~~~~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~ 295 (620)
|++||+|+ +.||+||++.. ..+|.|+|||+|++++ +.|+++ ....+|.|.+++|.|+++.+.+. ....
T Consensus 181 l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv--~~~~~w~v~l~~i~v~g~~~~~~----~~~~ 254 (478)
T 1qdm_A 181 MIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPV--TQKGYWQFDMGDVLVGGKSTGFC----AGGC 254 (478)
T ss_dssp HTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEE--EEETTEEEEECCEEETTEECSTT----TTCE
T ss_pred HHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEec--cCCCeEEEEEeEEEECCEEEeec----CCCc
Confidence 99999998 89999998752 3579999999999984 344444 35679999999999999887643 2356
Q ss_pred ceEeeccceeeeecHHHHHHHHHHHHHHh-------------h-----hc-ccc--------------cCC---------
Q 047816 296 GTVLDSGTTYAYLPEAAFLAFKDAIMSEL-------------Q-----SL-KQI--------------RGP--------- 333 (620)
Q Consensus 296 ~ailDSGtt~~~LP~~~~~~i~~~l~~~~-------------~-----~~-~~~--------------~~~--------- 333 (620)
.++|||||+++++|.+++++|.+++++.. . .+ ... .+.
T Consensus 255 ~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC~~~~~~~~~~~~~~ 334 (478)
T 1qdm_A 255 AAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTRGVSAGIRS 334 (478)
T ss_dssp EEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC--------------
T ss_pred eEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhccccccccCccccccccccc
Confidence 89999999999999999999999886421 0 00 000 000
Q ss_pred ----------CCC-------------------------------CccccccC------CCCCccccCCCCCeEEEEECCC
Q 047816 334 ----------DPN-------------------------------YNDICFSG------APSDVSQLSDTFPAVEMAFGNG 366 (620)
Q Consensus 334 ----------~~~-------------------------------~~~~C~~~------~~~~~~~~~~~~P~i~f~f~~g 366 (620)
... ....|+.. ...+|+.. ..+|+|+|+| +|
T Consensus 335 v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~C~~~-~~lP~i~f~~-gg 412 (478)
T 1qdm_A 335 VVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSL-GSMPDIEFTI-GG 412 (478)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEECGGGG-TTCCCEEEEE-TT
T ss_pred cccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEeecccc-cccccEEEEE-CC
Confidence 000 00123221 11233333 5789999999 89
Q ss_pred cEEEeCCCCcEEEecccCCeEEEEEEecC-----CCCceeehHhhhceEEEEEeCCCCEEEEEecC
Q 047816 367 QKLLLAPENYLFRHSKVRGAYCLGIFQNG-----RDPTTLLGGIIVRNTLVMYDREHSKIGFWKTN 427 (620)
Q Consensus 367 ~~~~l~~~~yi~~~~~~~~~~Cl~~~~~~-----~~~~~ILG~~fLr~~yvvfD~en~rIGfA~~~ 427 (620)
++|.|+|++|+++....++..|++.+... .++.||||+.|||++|+|||++|+|||||++.
T Consensus 413 ~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~rIGfA~a~ 478 (478)
T 1qdm_A 413 KKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKAA 478 (478)
T ss_dssp EEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCEEEEEeCC
Confidence 99999999999987543346898755432 24679999999999999999999999999863
No 23
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=1.6e-52 Score=451.99 Aligned_cols=305 Identities=25% Similarity=0.367 Sum_probs=253.1
Q ss_pred eeeeeccCCccceeEEEEEEecCCCcEEEEEEeCCCCceeEeCCCCC--CCCCCCCCCCCCCCCcccccccCcCCcccCC
Q 047816 72 ARMRLYDDLLLNGYYTTRLWIGTPPQTFALIVDTGSTVTYVPCATCE--HCGDHQDPKFEPDLSSTYQPVKCNLYCNCDR 149 (620)
Q Consensus 72 ~~~~l~~~~~~~~~Y~~~i~iGTP~Q~~~v~vDTGSs~~WV~~~~c~--~C~~~~~~~y~p~~SsT~~~~~c~~~c~c~~ 149 (620)
..+++.+. .+++|+++|+||||+|++.|++||||+++||+|..|. .|..+ +.|+|++|+||+..+
T Consensus 128 ~~~~L~n~--~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~~~~C~~~--~~ydps~SsT~~~~~--------- 194 (453)
T 2bju_A 128 DNIELVDF--QNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCLTK--HLYDSSKSRTYEKDG--------- 194 (453)
T ss_dssp EEEEEEEE--TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTGGGS--CCBCGGGCTTCEEEE---------
T ss_pred CceeeEec--CCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCCccccCCC--CcCCCccCCceeECC---------
Confidence 45666643 4678999999999999999999999999999999997 67665 799999999999976
Q ss_pred CCCcceeEEeeccCCceeEEEEEEEEEeCCCCCCCccceEEEEEEecc--CC-CcCCCcceEEecCCCCC------chHH
Q 047816 150 ERAQCVYERKYAEMSSSSGVLGEDIISFGNESDLKPQRAVFGCENVET--GD-LYSQHADGIIGLGRGDL------SVVD 220 (620)
Q Consensus 150 ~~~~~~~~~~Y~dg~~~~G~~~~D~v~lg~~~~~~~~~~~fg~~~~~~--~~-~~~~~~dGIlGLg~~~~------s~~~ 220 (620)
|.|.+.|++|+ +.|.+++|+|++|+ ++++ +.|||++... +. +.....+||||||++.. ++++
T Consensus 195 ----~~~~i~YgdGs-~~G~~~~Dtv~ig~---~~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~ 265 (453)
T 2bju_A 195 ----TKVEMNYVSGT-VSGFFSKDLVTVGN---LSLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPIVV 265 (453)
T ss_dssp ----EEEEEECSSSE-EEEEEEEEEEEETT---EEEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTTCCCCHHH
T ss_pred ----cEEEEEcCCCC-eEEEEEEEEEEEeC---cEEE-EEEEEEEEecccCccccccCCceeEeccCCcccccCCCcHHH
Confidence 68999999965 89999999999998 6778 9999999876 43 22356899999999753 5899
Q ss_pred HHHHcCCcc-cceEEeecCCCCCCceEEECCCCCCCC---ceEeecCCCCCCeeEEEEeEEEEccEEecCCCCccCCCCc
Q 047816 221 QLVEKGVIS-DSFSLCYGGMDVGGGAMVLGGISPPKD---MVFTHSDPVRSPYYNIDLKVIHVAGKPLPLNPKVFDGKHG 296 (620)
Q Consensus 221 ~L~~~g~I~-~~FSl~l~~~~~~~G~l~fGgiD~~~~---~~~~~~~~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~~ 296 (620)
+|++||+|+ +.||+||++.+..+|.|+|||+|++++ +.|+++ ....+|.|.++ |+|+++ +. .+..
T Consensus 266 ~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv--~~~~~w~V~l~-I~Vgg~-~~-------~~~~ 334 (453)
T 2bju_A 266 ELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKL--NHDLYWQITLD-AHVGNI-ML-------EKAN 334 (453)
T ss_dssp HHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEE--EEETTEEEEEE-EEETTE-EE-------EEEE
T ss_pred HHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEec--CCCceEEEEEE-EEECcE-Ee-------cccc
Confidence 999999998 899999998655689999999999873 344444 34679999999 999993 31 3457
Q ss_pred eEeeccceeeeecHHHHHHHHHHHHHHhhhcccccCCCC-CCccccccCCCCCccccCCCCCeEEEEECCCcEEEeCCCC
Q 047816 297 TVLDSGTTYAYLPEAAFLAFKDAIMSELQSLKQIRGPDP-NYNDICFSGAPSDVSQLSDTFPAVEMAFGNGQKLLLAPEN 375 (620)
Q Consensus 297 ailDSGtt~~~LP~~~~~~i~~~l~~~~~~~~~~~~~~~-~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~~~~ 375 (620)
++|||||++++||++++++|.+++++.. ...+ .|.++|+. +.+|+|+|+| +|.+++||+++
T Consensus 335 aIiDSGTsl~~lP~~~~~~l~~~i~~~~-------~~~g~~~~v~C~~----------~~~P~itf~f-gg~~~~l~~~~ 396 (453)
T 2bju_A 335 CIVDSGTSAITVPTDFLNKMLQNLDVIK-------VPFLPFYVTLCNN----------SKLPTFEFTS-ENGKYTLEPEY 396 (453)
T ss_dssp EEECTTCCSEEECHHHHHHHTTTSSCEE-------CTTSSCEEEETTC----------TTCCCEEEEC-SSCEEEECHHH
T ss_pred EEEcCCCCeEecCHHHHHHHHHHhCCcc-------cCCCceEEEecCC----------CCCCcEEEEE-CCEEEEECHHH
Confidence 9999999999999999999988875421 1223 57788842 4689999999 88999999999
Q ss_pred cEEEecccCCeEEEEEEecCC--CCceeehHhhhceEEEEEeCCCCEEEEEecC
Q 047816 376 YLFRHSKVRGAYCLGIFQNGR--DPTTLLGGIIVRNTLVMYDREHSKIGFWKTN 427 (620)
Q Consensus 376 yi~~~~~~~~~~Cl~~~~~~~--~~~~ILG~~fLr~~yvvfD~en~rIGfA~~~ 427 (620)
|+++....++..|+..+...+ ++.||||++|||++|+|||++++|||||+++
T Consensus 397 yi~~~~~~g~~~C~~~~~~~~~~~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 397 YLQHIEDVGPGLCMLNIIGLDFPVPTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp HEEECTTTSTTEEEECEEECCCSSCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred hEeecccCCCceEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 999875434568985544433 3589999999999999999999999999975
No 24
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=1.2e-51 Score=431.17 Aligned_cols=294 Identities=19% Similarity=0.306 Sum_probs=246.1
Q ss_pred ceeEEEEEEecCCCcEEEEEEeCCCCceeEeCCCCC--CC--CCCCCCCCCCCCCcccccccCcCCcccCCCCCcceeEE
Q 047816 83 NGYYTTRLWIGTPPQTFALIVDTGSTVTYVPCATCE--HC--GDHQDPKFEPDLSSTYQPVKCNLYCNCDRERAQCVYER 158 (620)
Q Consensus 83 ~~~Y~~~i~iGTP~Q~~~v~vDTGSs~~WV~~~~c~--~C--~~~~~~~y~p~~SsT~~~~~c~~~c~c~~~~~~~~~~~ 158 (620)
+.+|+++|+|| +|++.|++||||+++||+|..|. .| ..+ +.|+|++| ||+..+ +.|.+
T Consensus 16 ~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~--~~y~~~~S-T~~~~~-------------~~~~i 77 (330)
T 1yg9_A 16 NTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECVGGACVCPNL--QKYEKLKP-KYISDG-------------NVQVK 77 (330)
T ss_dssp CTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCCSGGGGSTTC--CCCCCSSC-EEEEEE-------------EEEEE
T ss_pred CCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCCccCccccc--CccCCCCC-ceEECC-------------CEEEE
Confidence 55799999999 89999999999999999999997 79 554 79999999 999865 58999
Q ss_pred eeccCCceeEEEEEEEEEeCCCCCCCccceEEEEEEeccCCCcCCCcceEEecCCCCCc-------hHHHHHHcCCcccc
Q 047816 159 KYAEMSSSSGVLGEDIISFGNESDLKPQRAVFGCENVETGDLYSQHADGIIGLGRGDLS-------VVDQLVEKGVISDS 231 (620)
Q Consensus 159 ~Y~dg~~~~G~~~~D~v~lg~~~~~~~~~~~fg~~~~~~~~~~~~~~dGIlGLg~~~~s-------~~~~L~~~g~I~~~ 231 (620)
.|++| ++.|.+++|+|++|+ +++.++.|||++.....+.....+||||||++..+ ++++|++||+|++.
T Consensus 78 ~Yg~G-s~~G~~~~Dtv~ig~---~~~~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i~~~ 153 (330)
T 1yg9_A 78 FFDTG-SAVGRGIEDSLTISQ---LTTSQQDIVLADELSQEVCILSADVVVGIAAPGCPNALKGKTVLENFVEENLIAPV 153 (330)
T ss_dssp ETTTE-EEEEEEEEEEEEETT---EEEEEEEEEEEEEECTHHHHTTCSEEEECSCTTSCCTTSCCCHHHHHHHTTSSCSE
T ss_pred EECCc-eEEEEEEEEEEEECC---EEEcCeEEEEEEEcccccccccCceEEEcCcchhccccCCCCHHHHHHhcCCCCce
Confidence 99995 459999999999998 67899999999987433434568999999998765 99999999988889
Q ss_pred eEEeecCCCCC--CceEEECCCCCCCC---ceEeecCCCCCCeeEEEEeEEEEccEEecCCCCccCCCCceEeeccceee
Q 047816 232 FSLCYGGMDVG--GGAMVLGGISPPKD---MVFTHSDPVRSPYYNIDLKVIHVAGKPLPLNPKVFDGKHGTVLDSGTTYA 306 (620)
Q Consensus 232 FSl~l~~~~~~--~G~l~fGgiD~~~~---~~~~~~~~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~~ailDSGtt~~ 306 (620)
||+||++.... +|.|+|||+|++++ +.|+++. ...+|.|.+++|.|+++.+. ..+..++|||||+++
T Consensus 154 FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~--~~~~w~v~l~~i~v~~~~~~------~~~~~aiiDSGTs~~ 225 (330)
T 1yg9_A 154 FSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLV--GDDSWKFRLDGVKIGDTTVA------PAGTQAIIDTSKAII 225 (330)
T ss_dssp EEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBS--CTTSCCEECSEEEETTEEEE------CTTCEEEECTTCSSE
T ss_pred EEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECC--CCCEEEEEeCeEEECCEEEc------CCCcEEEEecCCccc
Confidence 99999875322 79999999999873 3455543 67899999999999998764 234679999999999
Q ss_pred eecHHHHHHHHHHHHHHhhhcccccCCCC--CC-ccccccCCCCCccccCCCCCeEEEEECCCcEEEeCCCCcEEEeccc
Q 047816 307 YLPEAAFLAFKDAIMSELQSLKQIRGPDP--NY-NDICFSGAPSDVSQLSDTFPAVEMAFGNGQKLLLAPENYLFRHSKV 383 (620)
Q Consensus 307 ~LP~~~~~~i~~~l~~~~~~~~~~~~~~~--~~-~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~~~~yi~~~~~~ 383 (620)
+||++++++|.+++++... ..+ .| ..+|.. .+.+|+|+|+| +|.+++||+++|+++.
T Consensus 226 ~lP~~~~~~l~~~~~~~~~-------~~g~~~~~~~~C~~---------~~~~p~i~f~f-gg~~~~l~~~~y~~~~--- 285 (330)
T 1yg9_A 226 VGPKAYVNPINEAIGCVVE-------KTTTRRICKLDCSK---------IPSLPDVTFVI-NGRNFNISSQYYIQQN--- 285 (330)
T ss_dssp EEEHHHHHHHHHHHTCEEE-------ECSSCEEEEECGGG---------GGGSCCEEEEE-TTEEEEECHHHHEEEE---
T ss_pred cCCHHHHHHHHHHhCCccc-------CCCceEEEEEECCC---------ccccCcEEEEE-CCEEEEECHHHhcccC---
Confidence 9999999999999855421 122 45 677842 14689999999 8999999999999976
Q ss_pred CCeEEEEEEec-CCCCceeehHhhhceEEEEEeCCCCEEEEEecC
Q 047816 384 RGAYCLGIFQN-GRDPTTLLGGIIVRNTLVMYDREHSKIGFWKTN 427 (620)
Q Consensus 384 ~~~~Cl~~~~~-~~~~~~ILG~~fLr~~yvvfD~en~rIGfA~~~ 427 (620)
+..|+..+.. ...+.||||++|||++|+|||++|+|||||+++
T Consensus 286 -~~~C~~~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 286 -GNLCYSGFQPCGHSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp -TTEEEESEEEETTCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred -CCcEEEEEEeCCCCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 4579854443 335689999999999999999999999999974
No 25
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=4.6e-51 Score=436.05 Aligned_cols=332 Identities=23% Similarity=0.396 Sum_probs=254.5
Q ss_pred ceeEEEEEEecCCCcEEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCcccccccCcCCcccCCCCCcceeEEeecc
Q 047816 83 NGYYTTRLWIGTPPQTFALIVDTGSTVTYVPCATCEHCGDHQDPKFEPDLSSTYQPVKCNLYCNCDRERAQCVYERKYAE 162 (620)
Q Consensus 83 ~~~Y~~~i~iGTP~Q~~~v~vDTGSs~~WV~~~~c~~C~~~~~~~y~p~~SsT~~~~~c~~~c~c~~~~~~~~~~~~Y~d 162 (620)
+..|+++|+||||+|++.|++||||+++||+|..|..|. +.|+|++|+||+..+ |.|.+.|++
T Consensus 12 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~~~----~~f~~~~SsT~~~~~-------------~~~~i~Yg~ 74 (383)
T 2ewy_A 12 GRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSYID----TYFDTERSSTYRSKG-------------FDVTVKYTQ 74 (383)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBTTBS----CCCCGGGCTTCEEEE-------------EEEEEECSS
T ss_pred CCcEEEEEEecCCCceEEEEEecCCCceEEecCCCCccc----cCcccccCccceeCC-------------ceEEEEECC
Confidence 346889999999999999999999999999999987764 579999999999976 589999999
Q ss_pred CCceeEEEEEEEEEeCCCCCCCccceEEEEEEeccCCCc-CCCcceEEecCCCCC--------chHHHHHHcCCcccceE
Q 047816 163 MSSSSGVLGEDIISFGNESDLKPQRAVFGCENVETGDLY-SQHADGIIGLGRGDL--------SVVDQLVEKGVISDSFS 233 (620)
Q Consensus 163 g~~~~G~~~~D~v~lg~~~~~~~~~~~fg~~~~~~~~~~-~~~~dGIlGLg~~~~--------s~~~~L~~~g~I~~~FS 233 (620)
| ++.|.+++|+|+|++... ....+.|++.....+.+. ....+||||||++.+ +++++|++|+.|+++||
T Consensus 75 G-s~~G~~~~Dtv~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~~q~~i~~~FS 152 (383)
T 2ewy_A 75 G-SWTGFVGEDLVTIPKGFN-TSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDSLVTQANIPNVFS 152 (383)
T ss_dssp C-EEEEEEEEEEEEETTTEE-EEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHHTCCSCEE
T ss_pred c-EEEEEEEEEEEEECCCcc-ceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccCHHHHHHHccCCCcceE
Confidence 5 579999999999987321 112466888765554443 246799999998653 58999999999988999
Q ss_pred EeecC-------CCCCCceEEECCCCCCCC---ceEeecCCCCCCeeEEEEeEEEEccEEecCCCCccCCCCceEeeccc
Q 047816 234 LCYGG-------MDVGGGAMVLGGISPPKD---MVFTHSDPVRSPYYNIDLKVIHVAGKPLPLNPKVFDGKHGTVLDSGT 303 (620)
Q Consensus 234 l~l~~-------~~~~~G~l~fGgiD~~~~---~~~~~~~~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~~ailDSGt 303 (620)
+||++ ....+|.|+|||+|++++ +.|+++. ...+|.|.+++|+|+++.+.++...+. ...++|||||
T Consensus 153 ~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~--~~~~~~v~l~~i~v~g~~~~~~~~~~~-~~~aiiDSGT 229 (383)
T 2ewy_A 153 MQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIK--EEWYYQIEILKLEIGGQSLNLDCREYN-ADKAIVDSGT 229 (383)
T ss_dssp EEECCC---------CCEEEEETSCCGGGCCSCEEEEECS--SBTTBBCCEEEEEETTEECCCCTTTTT-SSCEEECTTC
T ss_pred EEeeccccccccCCCCCeEEEeCccchhhccCccEEEecC--CCceEEEEEEEEEECCEEccccccccC-CccEEEEcCC
Confidence 99964 134579999999999873 4455443 457999999999999998876554332 3579999999
Q ss_pred eeeeecHHHHHHHHHHHHHHhhhcccccCCC---CCCccccccCCCCCccccCCCCCeEEEEECCC-----cEEEeCCCC
Q 047816 304 TYAYLPEAAFLAFKDAIMSELQSLKQIRGPD---PNYNDICFSGAPSDVSQLSDTFPAVEMAFGNG-----QKLLLAPEN 375 (620)
Q Consensus 304 t~~~LP~~~~~~i~~~l~~~~~~~~~~~~~~---~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g-----~~~~l~~~~ 375 (620)
++++||++++++|++++.+..... .. .. ..+.++|+...... ...+|+|+|+|+++ .+++|++++
T Consensus 230 t~~~lP~~~~~~l~~~i~~~~~~~-~~--~~~~~~~~~~~C~~~~~~~----~~~~P~i~f~f~g~~~~~~~~~~l~~~~ 302 (383)
T 2ewy_A 230 TLLRLPQKVFDAVVEAVARASLIP-EF--SDGFWTGSQLACWTNSETP----WSYFPKISIYLRDENSSRSFRITILPQL 302 (383)
T ss_dssp SSEEEEHHHHHHHHHHHHHTTCSS-CC--CHHHHHTSEEEEECSSSCG----GGGSCCEEEEEECSSTTEEEEEEECHHH
T ss_pred ccccCCHHHHHHHHHHHhhhcccc-cC--ccccccccccccccCCccc----HhhCCcEEEEECCCCCCceEEEEEChHH
Confidence 999999999999999998865310 00 01 12467897543211 14689999999553 379999999
Q ss_pred cEEEeccc-CCeEEEEE-EecCCCCceeehHhhhceEEEEEeCCCCEEEEEecCCcc--cccccccCCCCCCCC
Q 047816 376 YLFRHSKV-RGAYCLGI-FQNGRDPTTLLGGIIVRNTLVMYDREHSKIGFWKTNCSE--LWERLHITGALSPIP 445 (620)
Q Consensus 376 yi~~~~~~-~~~~Cl~~-~~~~~~~~~ILG~~fLr~~yvvfD~en~rIGfA~~~c~~--~~~~~~~~~~p~~~p 445 (620)
|+.+..+. ++..|+++ +... ++.||||+.|||++|+|||++|+|||||+++|+. ..++++| .+|.+.+
T Consensus 303 yi~~~~~~~~~~~C~~~~i~~~-~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~~~~i~~i-~g~~~~~ 374 (383)
T 2ewy_A 303 YIQPMMGAGLNYECYRFGISPS-TNALVIGATVMEGFYVIFDRAQKRVGFAASPCAEIAGAAVSEI-SGPFSTE 374 (383)
T ss_dssp HEEEECCCTTCSEEEEESEEEE-SSCEEECHHHHTTEEEEEETTTTEEEEEECTTCBSSSCBCEEE-EEEEECT
T ss_pred heeecccCCCCceeEEEEecCC-CCcEEEChHHhCCeeEEEECCCCeEEEEeccCCCcCCcceeee-cCCCCCh
Confidence 99876432 25679752 2322 4579999999999999999999999999999985 3456666 3343333
No 26
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=8e-51 Score=436.65 Aligned_cols=335 Identities=22% Similarity=0.439 Sum_probs=251.7
Q ss_pred eeeeeccCCccceeEEEEEEecCCCcEEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCcccccccCcCC-cc----
Q 047816 72 ARMRLYDDLLLNGYYTTRLWIGTPPQTFALIVDTGSTVTYVPCATCEHCGDHQDPKFEPDLSSTYQPVKCNLY-CN---- 146 (620)
Q Consensus 72 ~~~~l~~~~~~~~~Y~~~i~iGTP~Q~~~v~vDTGSs~~WV~~~~c~~C~~~~~~~y~p~~SsT~~~~~c~~~-c~---- 146 (620)
..++++.+. .+++|+++|.||||+|++.|+|||||+++||+|..| .+|+|++.+.|.+. |.
T Consensus 10 ~~~pl~~~~-~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~-------------~~Sst~~~~~C~s~~C~~~~~ 75 (403)
T 3aup_A 10 VVLPVQNDG-STGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQ-------------YSSKTYQAPFCHSTQCSRANT 75 (403)
T ss_dssp EEEEEEECT-TTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSC-------------CCCSSCBCCCTTBHHHHHTTC
T ss_pred EEEeeecCC-CCceEEEEEECCCCCceeEEEEECCCCceeECCCCC-------------CCCCCCCccCCCCccccCccc
Confidence 346776443 467899999999999999999999999999998754 35677777777542 31
Q ss_pred -----cCCC------CCcceeEEeec-cCCceeEEEEEEEEEeCCCCC--------CCccceEEEEEEeccCC-CcCCCc
Q 047816 147 -----CDRE------RAQCVYERKYA-EMSSSSGVLGEDIISFGNESD--------LKPQRAVFGCENVETGD-LYSQHA 205 (620)
Q Consensus 147 -----c~~~------~~~~~~~~~Y~-dg~~~~G~~~~D~v~lg~~~~--------~~~~~~~fg~~~~~~~~-~~~~~~ 205 (620)
|.+. .+.|.|.+.|+ |++.+.|.+++|+|+|++... +++.++.|||+..+... +.....
T Consensus 76 ~~c~~c~~~~~s~~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~~~~ 155 (403)
T 3aup_A 76 HQCLSCPAASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNT 155 (403)
T ss_dssp CCEEECSSSCBTTBCSSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSSTTC
T ss_pred cCccccCCCCCCCCCCCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCCCCC
Confidence 2121 14689999998 788999999999999987321 46789999999887543 344568
Q ss_pred ceEEecCCCCCchHHHHHHcCCcccceEEeecCCCCCCceEEECCCCCCC-----------CceEeecCCCCCCeeEEEE
Q 047816 206 DGIIGLGRGDLSVVDQLVEKGVISDSFSLCYGGMDVGGGAMVLGGISPPK-----------DMVFTHSDPVRSPYYNIDL 274 (620)
Q Consensus 206 dGIlGLg~~~~s~~~~L~~~g~I~~~FSl~l~~~~~~~G~l~fGgiD~~~-----------~~~~~~~~~~~~~~w~v~l 274 (620)
+||||||++.++++.||.++.+.+++||+||.+....+|.|+||| |+.+ .+.|+++......+|.|.|
T Consensus 156 dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~~~~y~v~l 234 (403)
T 3aup_A 156 QGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRV 234 (403)
T ss_dssp CEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECTTSCEEECE
T ss_pred ceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECC-CchhccccccccccCceeecccccCCCCcceEEE
Confidence 999999999999999997654445899999988655789999999 7643 4456665443347999999
Q ss_pred eEEEEccEEe-cCCCCcc----CCCCceEeeccceeeeecHHHHHHHHHHHHHHhhhcccccCCCCCCccccccCCCCCc
Q 047816 275 KVIHVAGKPL-PLNPKVF----DGKHGTVLDSGTTYAYLPEAAFLAFKDAIMSELQSLKQIRGPDPNYNDICFSGAPSDV 349 (620)
Q Consensus 275 ~~i~v~g~~~-~~~~~~~----~~~~~ailDSGtt~~~LP~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~C~~~~~~~~ 349 (620)
++|+|+++.+ .++...+ .+...+||||||++++||++++++|.+++.+++.......... ....|+. |
T Consensus 235 ~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~--~~~~c~~-----c 307 (403)
T 3aup_A 235 NSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVA--PFGLCFN-----S 307 (403)
T ss_dssp EEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECCCT--TCSCEEC-----G
T ss_pred EEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccCCCC--CCCceEE-----C
Confidence 9999999988 6554433 2345699999999999999999999999987764433322111 1234542 2
Q ss_pred cccCCCCCeEEEEECCC--cEEEeCCCCcEEEecccCCeEEEEEEecCC--CCceeehHhhhceEEEEEeCCCCEEEE--
Q 047816 350 SQLSDTFPAVEMAFGNG--QKLLLAPENYLFRHSKVRGAYCLGIFQNGR--DPTTLLGGIIVRNTLVMYDREHSKIGF-- 423 (620)
Q Consensus 350 ~~~~~~~P~i~f~f~~g--~~~~l~~~~yi~~~~~~~~~~Cl~~~~~~~--~~~~ILG~~fLr~~yvvfD~en~rIGf-- 423 (620)
+.. +.+|+|+|+|+++ .+|.|++++|+++.. ++..|+++..... .+.||||+.|||++|+|||++|+||||
T Consensus 308 ~~~-~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~--~~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGf~A 384 (403)
T 3aup_A 308 NKI-NAYPSVDLVMDKPNGPVWRISGEDLMVQAQ--PGVTCLGVMNGGMQPRAEITLGARQLEENLVVFDLARSRVGFST 384 (403)
T ss_dssp GGC-CCCCCEEEEESSTTCCEEEECHHHHEEEC-----CEEECEEECCSCCSSSEEECHHHHTTSCEEEETTTTEEEEES
T ss_pred CCc-CcCCcEEEEEcCCCceEEEEcccceEEEcC--CCeEEEEEEcCCCCCCCcEEEChHHhcCeEEEEECCCCEEEEec
Confidence 322 4789999999554 599999999999764 2568997665543 258999999999999999999999999
Q ss_pred -----EecCCccc
Q 047816 424 -----WKTNCSEL 431 (620)
Q Consensus 424 -----A~~~c~~~ 431 (620)
++++|+..
T Consensus 385 ~~~~~~~~~C~~~ 397 (403)
T 3aup_A 385 SSLHSHGVKCADL 397 (403)
T ss_dssp SCGGGGTCCGGGS
T ss_pred ccccccCCCcccc
Confidence 56777654
No 27
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=4.1e-51 Score=426.48 Aligned_cols=299 Identities=17% Similarity=0.296 Sum_probs=245.5
Q ss_pred cceeEEEEEEecCCCcEEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCcccccccCcCCcccCCCCCcceeEEeec
Q 047816 82 LNGYYTTRLWIGTPPQTFALIVDTGSTVTYVPCATCEHCGDHQDPKFEPDLSSTYQPVKCNLYCNCDRERAQCVYERKYA 161 (620)
Q Consensus 82 ~~~~Y~~~i~iGTP~Q~~~v~vDTGSs~~WV~~~~c~~C~~~~~~~y~p~~SsT~~~~~c~~~c~c~~~~~~~~~~~~Y~ 161 (620)
.+++|+++|+|| +|++.|++||||+++||+|..|..|..+.++.|+|++|+ ++..+ |.|.+.|+
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~~~-------------~~~~i~Yg 75 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELPSSEQTGHDLYTPSSSA-TKLSG-------------YSWDISYG 75 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSCHHHHTTSCCCBCCSSC-EECTT-------------CBEEEECS
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCCccccCCCCCCCchhcC-CccCC-------------CEEEEEeC
Confidence 467899999999 899999999999999999999997755555899999999 55433 68999999
Q ss_pred cCCceeEEEEEEEEEeCCCCCCCccceEEEEEEeccCCCcC-CCcceEEecCCCCC---------chHHHHHHcCCcc-c
Q 047816 162 EMSSSSGVLGEDIISFGNESDLKPQRAVFGCENVETGDLYS-QHADGIIGLGRGDL---------SVVDQLVEKGVIS-D 230 (620)
Q Consensus 162 dg~~~~G~~~~D~v~lg~~~~~~~~~~~fg~~~~~~~~~~~-~~~dGIlGLg~~~~---------s~~~~L~~~g~I~-~ 230 (620)
+|+.+.|.+++|+|++++ ++++++.|||+....+.+.. ...+||||||++.. +++++|+++ |. +
T Consensus 76 ~Gs~~~G~~~~D~v~ig~---~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~--i~~~ 150 (325)
T 1ibq_A 76 DGSSASGDVYRDTVTVGG---VTTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFDTVKSQ--LDSP 150 (325)
T ss_dssp SSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG--SSSS
T ss_pred CCCEEEEEEEEeEEEECC---EEEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHHHHHHHh--cCCc
Confidence 977799999999999998 77899999999987654433 46799999999654 478999987 55 8
Q ss_pred ceEEeecCCCCCCceEEECCCCCCC---CceEeecCCCCCCeeEEEEeEEEEccEEecCCCCccCCCCceEeeccceeee
Q 047816 231 SFSLCYGGMDVGGGAMVLGGISPPK---DMVFTHSDPVRSPYYNIDLKVIHVAGKPLPLNPKVFDGKHGTVLDSGTTYAY 307 (620)
Q Consensus 231 ~FSl~l~~~~~~~G~l~fGgiD~~~---~~~~~~~~~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~~ailDSGtt~~~ 307 (620)
.||+||++. ..|.|+|||+|+++ .+.|+++.+ ...+|.|.+++|+|+++.+. ..+..++|||||++++
T Consensus 151 ~FS~~l~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~-~~~~w~v~l~~i~v~~~~~~------~~~~~aiiDSGTt~~~ 221 (325)
T 1ibq_A 151 LFAVQLKHD--APGVYDFGYIDDSKYTGSITYTDADS-SQGYWGFSTDGYSIGDGSSS------SSGFSAIADTGTTLIL 221 (325)
T ss_dssp EEEEEEETT--EEEEEEESSCCGGGBSSCCEEEECBC-TTSSCEEEECEEEETTSCCB------SCCEEEEECTTCCSEE
T ss_pred EEEEEecCC--CCceEEECCcChhhccCceEEEEcCC-CCceEEEEECcEEECCeecc------CCCceEEEeCCCCcEe
Confidence 999999863 57999999999987 456666543 46799999999999987653 2346899999999999
Q ss_pred ecHHHHHHHHHHHHHHhhhcccccCCCCCCccccccCCCCCccccCCCCCeEEEEECCCcEEEeCCCCcEEEecccCCeE
Q 047816 308 LPEAAFLAFKDAIMSELQSLKQIRGPDPNYNDICFSGAPSDVSQLSDTFPAVEMAFGNGQKLLLAPENYLFRHSKVRGAY 387 (620)
Q Consensus 308 LP~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~~~~yi~~~~~~~~~~ 387 (620)
||++++++|++++.+.. .....+.|..+|+ +.+|+|+|+| +|.+++||+++|++.....+...
T Consensus 222 lP~~~~~~i~~~i~~a~-----~~~~~g~~~~~C~-----------~~~P~i~f~f-gg~~~~i~~~~~~~~~~~~~~~~ 284 (325)
T 1ibq_A 222 LDDEIVSAYYEQVSGAQ-----ESYEAGGYVFSCS-----------TDLPDFTVVI-GDYKAVVPGKYINYAPVSTGSST 284 (325)
T ss_dssp ECHHHHHHHHTTSTTCB-----CCSSSSSCEEETT-----------CCCCCEEEEE-TTEEEEECHHHHEEEESSTTCSE
T ss_pred CCHHHHHHHHHhCCCce-----EcCcCCeEEEEcC-----------CCCCcEEEEE-CCEEEEECHHHhcccccCCCCCe
Confidence 99999999998873221 1112345677884 4689999999 89999999999998764323468
Q ss_pred EEEEEecC-CCCceeehHhhhceEEEEEeCCCCEEEEEecC
Q 047816 388 CLGIFQNG-RDPTTLLGGIIVRNTLVMYDREHSKIGFWKTN 427 (620)
Q Consensus 388 Cl~~~~~~-~~~~~ILG~~fLr~~yvvfD~en~rIGfA~~~ 427 (620)
|++.++.. ..+.||||++|||++|+|||++|+|||||++.
T Consensus 285 C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 285 CYGGIQSNSGLGLSILGDVFLKSQYVVFNSEGPKLGFAAQA 325 (325)
T ss_dssp EEESEEECTTTCSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred EEEEEEcCCCCCceEEChHHhcCEEEEEECCCCEEEeeeCC
Confidence 98755543 35789999999999999999999999999863
No 28
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=1.9e-50 Score=433.91 Aligned_cols=322 Identities=25% Similarity=0.382 Sum_probs=249.2
Q ss_pred ceeEEEEEEecCCCcEEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCcccccccCcCCcccCCCCCcceeEEeecc
Q 047816 83 NGYYTTRLWIGTPPQTFALIVDTGSTVTYVPCATCEHCGDHQDPKFEPDLSSTYQPVKCNLYCNCDRERAQCVYERKYAE 162 (620)
Q Consensus 83 ~~~Y~~~i~iGTP~Q~~~v~vDTGSs~~WV~~~~c~~C~~~~~~~y~p~~SsT~~~~~c~~~c~c~~~~~~~~~~~~Y~d 162 (620)
+..|+++|+||||+|+++|++||||+++||+|..| |..+ +.|+|++|+||+..+ |.|.+.|++
T Consensus 27 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c--~~~~--~~y~~~~SsT~~~~~-------------~~~~i~Yg~ 89 (402)
T 3vf3_A 27 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PFLH--RYYQRQLSSTYRDLR-------------KGVYVPYTQ 89 (402)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TTCS--CCCCGGGCTTCEEEE-------------EEEEEECSS
T ss_pred CCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC--Cccc--CCcCcccCcccccCC-------------CEEEEEECc
Confidence 34799999999999999999999999999999988 5544 789999999999976 689999998
Q ss_pred CCceeEEEEEEEEEeCCCCCCCcc-ceEEEEEEeccCCCc-CCCcceEEecCCCC--------CchHHHHHHcCCcccce
Q 047816 163 MSSSSGVLGEDIISFGNESDLKPQ-RAVFGCENVETGDLY-SQHADGIIGLGRGD--------LSVVDQLVEKGVISDSF 232 (620)
Q Consensus 163 g~~~~G~~~~D~v~lg~~~~~~~~-~~~fg~~~~~~~~~~-~~~~dGIlGLg~~~--------~s~~~~L~~~g~I~~~F 232 (620)
| ++.|.+++|+|+|++. ..+. .+.|+++....+.+. ....+||||||++. .+++++|++|++|++.|
T Consensus 90 G-s~~G~~~~D~v~ig~~--~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~~~F 166 (402)
T 3vf3_A 90 G-KWEGELGTDLVSIPHG--PNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVPNLF 166 (402)
T ss_dssp C-EEEEEEEEEEEECTTS--CSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCCSCE
T ss_pred E-EEEEEEEEEEEEECCc--cccceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHHHHccCCccce
Confidence 5 5799999999999853 2223 345777776655443 35679999999864 36899999999999999
Q ss_pred EEeecCC----------CCCCceEEECCCCCCCCc---eEeecCCCCCCeeEEEEeEEEEccEEecCCCCccCCCCceEe
Q 047816 233 SLCYGGM----------DVGGGAMVLGGISPPKDM---VFTHSDPVRSPYYNIDLKVIHVAGKPLPLNPKVFDGKHGTVL 299 (620)
Q Consensus 233 Sl~l~~~----------~~~~G~l~fGgiD~~~~~---~~~~~~~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~~ail 299 (620)
|+||.+. ....|.|+|||+|++++. .|+++ ....+|.|.+++|.|+++.+.++...+ ....++|
T Consensus 167 S~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~--~~~~~w~v~l~~i~v~g~~~~~~~~~~-~~~~aii 243 (402)
T 3vf3_A 167 SLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPI--RREWYYEVIIVRVEINGQDLKMDCKEY-NYDKSIV 243 (402)
T ss_dssp EEEECCCC-------------EEEEESSCCGGGEEEEEEEEEC--SSBTTBEECEEEEEETTEECCCCGGGG-GSSCEEE
T ss_pred EEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeC--CcCcEEEEEEeEEEECCEEeccccccc-CCCeEEE
Confidence 9999742 345799999999999843 34443 356799999999999999887654433 2457999
Q ss_pred eccceeeeecHHHHHHHHHHHHHHhhhcccccCCC-CCCccccccCCCCCccccCCCCCeEEEEECCCc-----EEEeCC
Q 047816 300 DSGTTYAYLPEAAFLAFKDAIMSELQSLKQIRGPD-PNYNDICFSGAPSDVSQLSDTFPAVEMAFGNGQ-----KLLLAP 373 (620)
Q Consensus 300 DSGtt~~~LP~~~~~~i~~~l~~~~~~~~~~~~~~-~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~-----~~~l~~ 373 (620)
||||++++||.+++++|++++.+.... ....... ..+.++|+...... ...+|+|+|+|+++. +++|++
T Consensus 244 DSGTt~~~lP~~~~~~i~~~i~~~~~~-~~~~~~~~~~~~~~C~~~~~~~----~~~~P~i~f~f~g~~~~~~~~~~l~~ 318 (402)
T 3vf3_A 244 DSGTTNLRLPKKVFEAAVKSIKAASST-EKFPDGFWLGEQLVCWQAGTTP----WNIFPVISLYLMGEVTNQSFRITILP 318 (402)
T ss_dssp CTTCCSEEEEHHHHHHHHHHHHHHTTT-SCCCTTGGGTCSCEEEETTCCC----GGGSCCEEEEEECSSTTEEEEEEECH
T ss_pred ECCCCcccCCHHHHHHHHHHHhhhccc-cccCccccccccccccccccch----HhhCCceEEEEecCCCCceEEEEECH
Confidence 999999999999999999999987531 1111111 23467897543211 136899999995443 599999
Q ss_pred CCcEEEecccC--CeEEEEEEecCCCCceeehHhhhceEEEEEeCCCCEEEEEecCCcccc
Q 047816 374 ENYLFRHSKVR--GAYCLGIFQNGRDPTTLLGGIIVRNTLVMYDREHSKIGFWKTNCSELW 432 (620)
Q Consensus 374 ~~yi~~~~~~~--~~~Cl~~~~~~~~~~~ILG~~fLr~~yvvfD~en~rIGfA~~~c~~~~ 432 (620)
++|+.+..+.+ ...|+++.....++.||||++|||++|+|||++++|||||+++|+..+
T Consensus 319 ~~yi~~~~~~~~~~~~C~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~ 379 (402)
T 3vf3_A 319 QQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHD 379 (402)
T ss_dssp HHHEEECCCGGGTTEEEEEECEEEESSCEEECHHHHTTEEEEEEGGGTEEEEEEETTCCBC
T ss_pred HHheehhccCCCCCceEEEEeccCCCCcEEEChHHhCCeEEEEECCCCEEEEEecccCccc
Confidence 99999865422 248985222222468999999999999999999999999999999653
No 29
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=3.6e-50 Score=430.67 Aligned_cols=325 Identities=25% Similarity=0.413 Sum_probs=251.5
Q ss_pred ceeEEEEEEecCCCcEEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCcccccccCcCCcccCCCCCcceeEEeecc
Q 047816 83 NGYYTTRLWIGTPPQTFALIVDTGSTVTYVPCATCEHCGDHQDPKFEPDLSSTYQPVKCNLYCNCDRERAQCVYERKYAE 162 (620)
Q Consensus 83 ~~~Y~~~i~iGTP~Q~~~v~vDTGSs~~WV~~~~c~~C~~~~~~~y~p~~SsT~~~~~c~~~c~c~~~~~~~~~~~~Y~d 162 (620)
+.+|+++|.||||+|++.|+|||||+++||+|..|..|. +.|+|++|+||+..+ |.|.+.|++
T Consensus 20 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~~~----~~y~~~~SsT~~~~~-------------~~~~i~Yg~ 82 (395)
T 2qp8_A 20 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLH----RYYQRQLSSTYRDLR-------------KGVYVPYTQ 82 (395)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTTCS----CCCCGGGCTTCEEEE-------------EEEEEECSS
T ss_pred CceEEEEEEecCCCceEEEEEecCCCceEEECCCCcccc----CCcCcccCCCceeCC-------------ceEEEEECC
Confidence 457999999999999999999999999999999886653 689999999999976 589999999
Q ss_pred CCceeEEEEEEEEEeCCCCCCCcc-ceEEEEEEeccCCCc-CCCcceEEecCCCCC--------chHHHHHHcCCcccce
Q 047816 163 MSSSSGVLGEDIISFGNESDLKPQ-RAVFGCENVETGDLY-SQHADGIIGLGRGDL--------SVVDQLVEKGVISDSF 232 (620)
Q Consensus 163 g~~~~G~~~~D~v~lg~~~~~~~~-~~~fg~~~~~~~~~~-~~~~dGIlGLg~~~~--------s~~~~L~~~g~I~~~F 232 (620)
| ++.|.+++|+|+|++. ..+. .+.|++.....+.+. ....+||||||++.. +++++|++|++|+++|
T Consensus 83 G-s~~G~~~~Dtv~ig~g--~~~~~~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~l~~q~~i~~~F 159 (395)
T 2qp8_A 83 G-KWEGELGTDLVSIPHG--PNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVPNLF 159 (395)
T ss_dssp C-EEEEEEEEEEEECTTS--CSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCCSCE
T ss_pred c-EEEEEEEeEEEEECCC--CCceEEEEEEEEEccCcccccccCccceEEcCchhhccCCCCCCCHHHHHHHccCCcceE
Confidence 5 4699999999999842 2222 366787765544443 346799999998653 5899999999998999
Q ss_pred EEeecCC----------CCCCceEEECCCCCCCC---ceEeecCCCCCCeeEEEEeEEEEccEEecCCCCccCCCCceEe
Q 047816 233 SLCYGGM----------DVGGGAMVLGGISPPKD---MVFTHSDPVRSPYYNIDLKVIHVAGKPLPLNPKVFDGKHGTVL 299 (620)
Q Consensus 233 Sl~l~~~----------~~~~G~l~fGgiD~~~~---~~~~~~~~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~~ail 299 (620)
|+||++. ...+|.|+|||+|++++ +.|+++ ....+|.|.+++|+|+++.+.++...+. ...++|
T Consensus 160 S~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~--~~~~~~~v~l~~i~v~g~~~~~~~~~~~-~~~aii 236 (395)
T 2qp8_A 160 SLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPI--RREWYYEVIIVRVEINGQDLKMDCKEYN-YDKSIV 236 (395)
T ss_dssp EEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEEC--CSBTTBBCCEEEEEETTEECCCCGGGGG-SSCEEE
T ss_pred EEEeccccccccccccccCCCcEEEECCcCcccccCceEEecc--CCCceEEEEEEEEEECCEEcccCccccC-CceEEE
Confidence 9999753 13579999999999874 344443 3467999999999999998876554332 357999
Q ss_pred eccceeeeecHHHHHHHHHHHHHHhhhccccc-CCCCCCccccccCCCCCccccCCCCCeEEEEECCCc-----EEEeCC
Q 047816 300 DSGTTYAYLPEAAFLAFKDAIMSELQSLKQIR-GPDPNYNDICFSGAPSDVSQLSDTFPAVEMAFGNGQ-----KLLLAP 373 (620)
Q Consensus 300 DSGtt~~~LP~~~~~~i~~~l~~~~~~~~~~~-~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~-----~~~l~~ 373 (620)
||||++++||++++++|++++.+..... ... +....+.++|+...... ...+|+|+|+|+++. +|+|+|
T Consensus 237 DSGTt~~~lP~~~~~~l~~~i~~~~~~~-~~~~~~~~~~~~~C~~~~~~~----~~~~P~i~f~f~g~~~~~~~~~~l~p 311 (395)
T 2qp8_A 237 DSGTTNLRLPKKVFEAAVKSIKAASSTE-KFPDGFWLGEQLVCWQAGTTP----WNIFPVISLYLMGEVTNQSFRITILP 311 (395)
T ss_dssp CTTCCSEEEEHHHHHHHHHHHHHHTTTS-CCCHHHHTTCSCEEESTTCCC----GGGSCCEEEEEECSSTTEEEEEEECH
T ss_pred EcCCCcEecCHHHHHHHHHHHhhhcccc-cCCccccccccccccccccch----HhhCCcEEEEEccCCCCceEEEEECH
Confidence 9999999999999999999998875311 000 00012357897543211 236899999996542 799999
Q ss_pred CCcEEEeccc--CCeEEE--EEEecCCCCceeehHhhhceEEEEEeCCCCEEEEEecCCccc--cccccc
Q 047816 374 ENYLFRHSKV--RGAYCL--GIFQNGRDPTTLLGGIIVRNTLVMYDREHSKIGFWKTNCSEL--WERLHI 437 (620)
Q Consensus 374 ~~yi~~~~~~--~~~~Cl--~~~~~~~~~~~ILG~~fLr~~yvvfD~en~rIGfA~~~c~~~--~~~~~~ 437 (620)
++|+.+..+. +...|+ ++... ++.||||+.|||++|+|||++|+|||||+++|+.. .+++++
T Consensus 312 ~~yi~~~~~~~~~~~~C~~~~i~~~--~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~~~~i~~i 379 (395)
T 2qp8_A 312 QQYLRPVEDVATSQDDCYKFAISQS--STGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEFRTAAV 379 (395)
T ss_dssp HHHEEEECCTTCCSCEEEEECEEEE--SSCEEECHHHHTTEEEEEETTTTEEEEEEETTCCCCSSCCCEE
T ss_pred HHhEeecccCCCCCceEEEEEecCC--CCcEEEChHHhCCeeEEEECCCCEEEEEeccCCCCCCCcccee
Confidence 9999986531 235796 34332 46799999999999999999999999999999963 345555
No 30
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=2e-50 Score=420.73 Aligned_cols=296 Identities=16% Similarity=0.260 Sum_probs=242.8
Q ss_pred cceeEEEEEEecCCCcEEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCcccccccCcCCcccCCCCCcceeEEeec
Q 047816 82 LNGYYTTRLWIGTPPQTFALIVDTGSTVTYVPCATCEHCGDHQDPKFEPDLSSTYQPVKCNLYCNCDRERAQCVYERKYA 161 (620)
Q Consensus 82 ~~~~Y~~~i~iGTP~Q~~~v~vDTGSs~~WV~~~~c~~C~~~~~~~y~p~~SsT~~~~~c~~~c~c~~~~~~~~~~~~Y~ 161 (620)
.+++|+++|+|| +|++.|++||||+++||+|..|..|..+.++.|+|++|+ ++..+ |.|.+.|+
T Consensus 13 ~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~~~-------------~~~~i~Yg 76 (323)
T 1izd_A 13 NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTPSSERSGHDYYTPGSSA-QKIDG-------------ATWSISYG 76 (323)
T ss_dssp GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHTTCCCBCCCTTC-EEEEE-------------EEEEEECT
T ss_pred CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCCcccccCCCCCCccccC-CccCC-------------CeEEEEcC
Confidence 466899999999 899999999999999999999997654445799999999 65444 68999999
Q ss_pred cCCceeEEEEEEEEEeCCCCCCCccceEEEEEEeccCCCcC-CCcceEEecCCCCC---------chHHHHHHcCCcc-c
Q 047816 162 EMSSSSGVLGEDIISFGNESDLKPQRAVFGCENVETGDLYS-QHADGIIGLGRGDL---------SVVDQLVEKGVIS-D 230 (620)
Q Consensus 162 dg~~~~G~~~~D~v~lg~~~~~~~~~~~fg~~~~~~~~~~~-~~~dGIlGLg~~~~---------s~~~~L~~~g~I~-~ 230 (620)
+|+.+.|.+++|+|++++ ++++++.|||++...+.+.. ...+||||||++.+ +++++|+++ |. +
T Consensus 77 ~Gs~~~G~~~~D~v~ig~---~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~--i~~~ 151 (323)
T 1izd_A 77 DGSSASGDVYKDKVTVGG---VSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNVKSS--LSEP 151 (323)
T ss_dssp TSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG--SSSS
T ss_pred CCCeEEEEEEEEEEEECC---EEECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHHHHHHh--ccCc
Confidence 977799999999999998 77899999999987654332 46799999999643 478999987 55 8
Q ss_pred ceEEeecCCCCCCceEEECCCCCCCC---ceEeecCCCCCCeeEEEEeEEEEccEEecCCCCccCCCCceEeeccceeee
Q 047816 231 SFSLCYGGMDVGGGAMVLGGISPPKD---MVFTHSDPVRSPYYNIDLKVIHVAGKPLPLNPKVFDGKHGTVLDSGTTYAY 307 (620)
Q Consensus 231 ~FSl~l~~~~~~~G~l~fGgiD~~~~---~~~~~~~~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~~ailDSGtt~~~ 307 (620)
.||+||++. ..|.|+|||+|++++ +.|+++.. ...+|.|.+++|+|++ .+. ..+..++|||||++++
T Consensus 152 ~FS~~L~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~-~~~~w~v~l~~i~v~~-~~~------~~~~~aiiDSGTs~~~ 221 (323)
T 1izd_A 152 IFAVALKHN--APGVYDFGYTDSSKYTGSITYTDVDN-SQGFWGFTADGYSIGS-DSS------SDSITGIADTGTTLLL 221 (323)
T ss_dssp EEEEECCTT--SCEEEEESSCCTTSEEEEEEEEECBC-TTSSCEEEESEEEETT-EEE------CCCEEEEECTTCCSEE
T ss_pred EEEEEccCC--CCCEEEECCcCccccccceEEEECCC-CCceEEEEECeEEECC-ccc------CCCceEEEeCCCccee
Confidence 999999863 579999999999983 44555432 5679999999999999 543 2346899999999999
Q ss_pred ecHHHHHHHHHHHHHHhhhcccccCCCCCCccccccCCCCCccccCCCCCeEEEEECCCcEEEeCCCCcEEEecccCCeE
Q 047816 308 LPEAAFLAFKDAIMSELQSLKQIRGPDPNYNDICFSGAPSDVSQLSDTFPAVEMAFGNGQKLLLAPENYLFRHSKVRGAY 387 (620)
Q Consensus 308 LP~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~~~~yi~~~~~~~~~~ 387 (620)
||++++++|.+++.+.. .....+.|..+|+ +.+|+|+|+| +|.+++||+++|+++.. ++..
T Consensus 222 lp~~~~~~i~~~i~ga~-----~~~~~g~~~~~C~-----------~~~P~i~f~f-gg~~~~i~~~~~~~~~~--~~~~ 282 (323)
T 1izd_A 222 LDDSIVDAYYEQVNGAS-----YDSSQGGYVFPSS-----------ASLPDFSVTI-GDYTATVPGEYISFADV--GNGQ 282 (323)
T ss_dssp ECHHHHHHHHTTSTTCE-----EETTTTEEEEETT-----------CCCCCEEEEE-TTEEEEECHHHHEEEEC--STTE
T ss_pred CCHHHHHHHHHhCCCcE-----EcCcCCEEEEECC-----------CCCceEEEEE-CCEEEecCHHHeEEecC--CCCe
Confidence 99999999998874221 1112345667884 4689999999 89999999999998763 3568
Q ss_pred EEEEEecC-CCCceeehHhhhceEEEEEeCCCCEEEEEecC
Q 047816 388 CLGIFQNG-RDPTTLLGGIIVRNTLVMYDREHSKIGFWKTN 427 (620)
Q Consensus 388 Cl~~~~~~-~~~~~ILG~~fLr~~yvvfD~en~rIGfA~~~ 427 (620)
|++.+... ..+.||||++|||++|+|||++|+|||||++.
T Consensus 283 C~~~i~~~~~~~~~IlG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1izd_A 283 TFGGIQSNSGIGFSIFGDVFLKSQYVVFDASGPRLGFAAQA 323 (323)
T ss_dssp EEESEEECTTTSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEEEEcCCCCCcEEEChHHhcCEEEEEECCCCEEEEeeCC
Confidence 98754443 35789999999999999999999999999863
No 31
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=1.6e-50 Score=421.58 Aligned_cols=296 Identities=18% Similarity=0.305 Sum_probs=243.1
Q ss_pred cceeEEEEEEecCCCcEEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCcccccccCcCCcccCCCCCcceeEEeec
Q 047816 82 LNGYYTTRLWIGTPPQTFALIVDTGSTVTYVPCATCEHCGDHQDPKFEPDLSSTYQPVKCNLYCNCDRERAQCVYERKYA 161 (620)
Q Consensus 82 ~~~~Y~~~i~iGTP~Q~~~v~vDTGSs~~WV~~~~c~~C~~~~~~~y~p~~SsT~~~~~c~~~c~c~~~~~~~~~~~~Y~ 161 (620)
.+++|+++|+|| +|++.|++||||+++||+|..|..|..+.++.|+|++|+ ++..+ |.|++.|+
T Consensus 13 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~~~-------------~~~~i~Yg 76 (323)
T 1bxo_A 13 NDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELPASQQSGHSVYNPSATG-KELSG-------------YTWSISYG 76 (323)
T ss_dssp GGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHTTSCCBCHHHHC-EEEEE-------------EEEEEECT
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCchhccCCCCCCcccCC-cccCC-------------CeEEEEeC
Confidence 466899999999 999999999999999999999997755555899999998 66544 68999999
Q ss_pred cCCceeEEEEEEEEEeCCCCCCCccceEEEEEEeccCCCcC-CCcceEEecCCCCC---------chHHHHHHcCCcc-c
Q 047816 162 EMSSSSGVLGEDIISFGNESDLKPQRAVFGCENVETGDLYS-QHADGIIGLGRGDL---------SVVDQLVEKGVIS-D 230 (620)
Q Consensus 162 dg~~~~G~~~~D~v~lg~~~~~~~~~~~fg~~~~~~~~~~~-~~~dGIlGLg~~~~---------s~~~~L~~~g~I~-~ 230 (620)
+|+.+.|.+++|+|++++ +++.++.|||++..++.+.. ...+||||||++.. +++++|+++ |. +
T Consensus 77 ~Gs~~~G~~~~D~v~ig~---~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~ 151 (323)
T 1bxo_A 77 DGSSASGNVFTDSVTVGG---VTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVKSS--LAQP 151 (323)
T ss_dssp TSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHHHHHGGG--BSSS
T ss_pred CCCeEEEEEEEEEEEECC---EEECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCCHHHHHHHh--cCCc
Confidence 977799999999999998 67899999999987654433 46799999998643 589999987 65 8
Q ss_pred ceEEeecCCCCCCceEEECCCCCCC---CceEeecCCCCCCeeEEEEeEEEEccEEecCCCCccCCCCceEeeccceeee
Q 047816 231 SFSLCYGGMDVGGGAMVLGGISPPK---DMVFTHSDPVRSPYYNIDLKVIHVAGKPLPLNPKVFDGKHGTVLDSGTTYAY 307 (620)
Q Consensus 231 ~FSl~l~~~~~~~G~l~fGgiD~~~---~~~~~~~~~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~~ailDSGtt~~~ 307 (620)
.||+||++. ..|.|+|||+|+++ .+.|+++.+ ...+|.|.+++|+|++ +. ..+..++|||||++++
T Consensus 152 ~FS~~L~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~-~~~~w~v~l~~i~v~~--~~------~~~~~aiiDSGTs~~~ 220 (323)
T 1bxo_A 152 LFAVALKHQ--QPGVYDFGFIDSSKYTGSLTYTGVDN-SQGFWSFNVDSYTAGS--QS------GDGFSGIADTGTTLLL 220 (323)
T ss_dssp EEEEECCSS--SCEEEEESSCCGGGBSSCCEEEECBC-TTSSCEEEEEEEEETT--EE------EEEEEEEECTTCSSEE
T ss_pred EEEEEEeCC--CCceEEEeCcChhhccCceEEEECCC-CCCeEEEEEeeEEECC--cc------CCCceEEEeCCCCcee
Confidence 999999863 57999999999987 456666543 4679999999999998 21 2345799999999999
Q ss_pred ecHHHHHHHHHHHHHHhhhcccccCCCCCCccccccCCCCCccccCCCCCeEEEEECCCcEEEeCCCCcEEEecccCCeE
Q 047816 308 LPEAAFLAFKDAIMSELQSLKQIRGPDPNYNDICFSGAPSDVSQLSDTFPAVEMAFGNGQKLLLAPENYLFRHSKVRGAY 387 (620)
Q Consensus 308 LP~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~~~~yi~~~~~~~~~~ 387 (620)
||++++++|++++.+.. .....+.|..+|+ +.+|+|+|+| +|.+++||+++|+++... +...
T Consensus 221 lP~~~~~~l~~~i~~a~-----~~~~~g~~~~~C~-----------~~~P~i~f~f-gg~~~~l~~~~~~~~~~~-~~~~ 282 (323)
T 1bxo_A 221 LDDSVVSQYYSQVSGAQ-----QDSNAGGYVFDCS-----------TNLPDFSVSI-SGYTATVPGSLINYGPSG-DGST 282 (323)
T ss_dssp ECHHHHHHHHTTSTTCE-----EETTTTEEEECTT-----------CCCCCEEEEE-TTEEEEECHHHHEEEECS-SSSC
T ss_pred CCHHHHHHHHHhCCCce-----EcCcCCEEEEECC-----------CCCceEEEEE-CCEEEEECHHHeEEeccC-CCCe
Confidence 99999999998873321 1112345667884 4689999999 899999999999987643 3468
Q ss_pred EEEEEecC-CCCceeehHhhhceEEEEEeCCCCEEEEEecC
Q 047816 388 CLGIFQNG-RDPTTLLGGIIVRNTLVMYDREHSKIGFWKTN 427 (620)
Q Consensus 388 Cl~~~~~~-~~~~~ILG~~fLr~~yvvfD~en~rIGfA~~~ 427 (620)
|++.++.. ..+.||||++|||++|+|||++|+|||||++.
T Consensus 283 C~~~i~~~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1bxo_A 283 CLGGIQSNSGIGFSIFGDIFLKSQYVVFDSDGPQLGFAPQA 323 (323)
T ss_dssp EEESEEECTTCSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred EEEEEECCCCCCcEEEChHHHcCEEEEEECCCCEEEEecCC
Confidence 98755543 35689999999999999999999999999863
No 32
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=6.3e-49 Score=412.71 Aligned_cols=300 Identities=19% Similarity=0.331 Sum_probs=240.2
Q ss_pred eeeeccCCccceeEEEEEEecCCCcEEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCcccccccCcCCcccCCCCC
Q 047816 73 RMRLYDDLLLNGYYTTRLWIGTPPQTFALIVDTGSTVTYVPCATCEHCGDHQDPKFEPDLSSTYQPVKCNLYCNCDRERA 152 (620)
Q Consensus 73 ~~~l~~~~~~~~~Y~~~i~iGTP~Q~~~v~vDTGSs~~WV~~~~c~~C~~~~~~~y~p~~SsT~~~~~c~~~c~c~~~~~ 152 (620)
.+++.+. +.+|+++|.||||+|++.|+|||||+++||+|. +.|+|++|+++..
T Consensus 4 ~~~l~n~---~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~----------~~y~~s~Ss~~~~-------------- 56 (340)
T 1wkr_A 4 SVPATNQ---LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD----------KSYVKTSTSSATS-------------- 56 (340)
T ss_dssp EEEEEEC---SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS----------SCCCCCTTCEEEE--------------
T ss_pred cEeeecc---CcEEEEEEEECCCCcEEEEEEeCCChhheecCC----------CccCCcCCccccC--------------
Confidence 4566654 347999999999999999999999999999863 4799999886543
Q ss_pred cceeEEeeccCCceeEEEEEEEEEeCCCCCCCccceEEEEEEeccCCCcCCCcceEEecCCCCC--------------ch
Q 047816 153 QCVYERKYAEMSSSSGVLGEDIISFGNESDLKPQRAVFGCENVETGDLYSQHADGIIGLGRGDL--------------SV 218 (620)
Q Consensus 153 ~~~~~~~Y~dg~~~~G~~~~D~v~lg~~~~~~~~~~~fg~~~~~~~~~~~~~~dGIlGLg~~~~--------------s~ 218 (620)
|.|.+.|++|. +.|.+++|+|+||+ +++.++.|||++...+ + ...+||||||++.. ++
T Consensus 57 -~~~~i~Yg~Gs-~~G~~~~Dtv~~g~---~~v~~~~fg~~~~~~~-~--~~~~GilGLg~~~~s~~~~~~~~~~~~~~~ 128 (340)
T 1wkr_A 57 -DKVSVTYGSGS-FSGTEYTDTVTLGS---LTIPKQSIGVASRDSG-F--DGVDGILGVGPVDLTVGTLSPHTSTSIPTV 128 (340)
T ss_dssp -EEEEEECSSCE-EEEEEEEEEEEETT---EEEEEEEEEEEEEEES-C--TTCSEEEECSCGGGGTTSEESCTTCCCCCH
T ss_pred -ceEEEEECCcE-EEEEEEEEEEEECC---EEEcceEEEEEEccCC-C--cCCCcEEECCccccccccccccccccCCCH
Confidence 68999999965 89999999999998 7789999999998754 3 25899999998653 57
Q ss_pred HHHHHHcCCcc-cceEEeecCC---CCCCceEEECCCCCCC---CceEeecCCCC--CCeeEEEEeEEEEcc-EEecCCC
Q 047816 219 VDQLVEKGVIS-DSFSLCYGGM---DVGGGAMVLGGISPPK---DMVFTHSDPVR--SPYYNIDLKVIHVAG-KPLPLNP 288 (620)
Q Consensus 219 ~~~L~~~g~I~-~~FSl~l~~~---~~~~G~l~fGgiD~~~---~~~~~~~~~~~--~~~w~v~l~~i~v~g-~~~~~~~ 288 (620)
+++|++||+|+ ++||+||++. ....|.|+|||+|+++ .+.|+++.... ..+|.|. ++|.|++ +.+.
T Consensus 129 ~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v~~~~~l~--- 204 (340)
T 1wkr_A 129 TDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRYGSSTSIL--- 204 (340)
T ss_dssp HHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEETTTEEEE---
T ss_pred HHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEEECCCeEcc---
Confidence 99999999998 8999999864 2347999999999986 45566654321 5799999 9999998 7664
Q ss_pred CccCCCCceEeeccceeeeecHHHHHHHHHHHHHHhhhcccccCCCCCCccccccCCCCCccccCCCCCeEEEEECCCcE
Q 047816 289 KVFDGKHGTVLDSGTTYAYLPEAAFLAFKDAIMSELQSLKQIRGPDPNYNDICFSGAPSDVSQLSDTFPAVEMAFGNGQK 368 (620)
Q Consensus 289 ~~~~~~~~ailDSGtt~~~LP~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~ 368 (620)
.+..++|||||++++||++++++|.+++++++. ...+.|..+|.. .+.+|+|+|+| +|.+
T Consensus 205 ----~~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~------~~~g~~~~~C~~---------~~~~p~i~f~f-~g~~ 264 (340)
T 1wkr_A 205 ----SSTAGIVDTGTTLTLIASDAFAKYKKATGAVAD------NNTGLLRLTTAQ---------YANLQSLFFTI-GGQT 264 (340)
T ss_dssp ----EEEEEEECTTBCSEEECHHHHHHHHHHHTCEEC------TTTSSEEECHHH---------HHTCCCEEEEE-TTEE
T ss_pred ----CCCeEEEeCCcccccCCHHHHHHHHHhhCCEEc------CCCCeEEeeccc---------cccCCcEEEEE-CCEE
Confidence 124799999999999999999999888765432 223456778832 14689999999 8899
Q ss_pred EEeCCCCcEEEeccc-----CCeEEE-EEEecC----CCCceeehHhhhceEEEEEeCCCCEEEEEecCCccc
Q 047816 369 LLLAPENYLFRHSKV-----RGAYCL-GIFQNG----RDPTTLLGGIIVRNTLVMYDREHSKIGFWKTNCSEL 431 (620)
Q Consensus 369 ~~l~~~~yi~~~~~~-----~~~~Cl-~~~~~~----~~~~~ILG~~fLr~~yvvfD~en~rIGfA~~~c~~~ 431 (620)
+.|++++|+++.... ....|+ .+.... .+..||||++|||++|+|||++++|||||+++|++.
T Consensus 265 ~~i~~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~ 337 (340)
T 1wkr_A 265 FELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTSFTTA 337 (340)
T ss_dssp EEECTGGGBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECTTTTC
T ss_pred EEEcHHHhccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEecCCCCC
Confidence 999999999765321 123554 444321 124699999999999999999999999999999864
No 33
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=2.1e-47 Score=407.03 Aligned_cols=336 Identities=17% Similarity=0.330 Sum_probs=243.2
Q ss_pred eeeccCCccceeEEEEEEecCCCcEEEEEEeCCCCceeEeCCCCC-----CCCCC---CCCCCCCCCCcccccccCcCCc
Q 047816 74 MRLYDDLLLNGYYTTRLWIGTPPQTFALIVDTGSTVTYVPCATCE-----HCGDH---QDPKFEPDLSSTYQPVKCNLYC 145 (620)
Q Consensus 74 ~~l~~~~~~~~~Y~~~i~iGTP~Q~~~v~vDTGSs~~WV~~~~c~-----~C~~~---~~~~y~p~~SsT~~~~~c~~~c 145 (620)
++++.|. .+++|+++|.|||| |+|||||+++||+|..|. .|... ....|++. |+++....
T Consensus 5 ~pv~~~~-~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~~~~~~~C~s~~C~~~~~~~~~-sc~~~~~~----- 72 (381)
T 1t6e_X 5 APVTKDP-ATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQPPAEIPCSSPTCLLANAYPAP-GCPAPSCG----- 72 (381)
T ss_dssp EEEEECT-TTCCEEEEEETTEE-----EEEETTCCCEEECCCTTCCCCCCBTTSHHHHHHHSSCCT-TCCCCCC------
T ss_pred EeEEecC-CCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCCCCCccCCCCchhccccCCCCC-CCCCccCC-----
Confidence 4455332 36689999999998 999999999999996552 33221 01345554 22221100
Q ss_pred ccCCCCCcc-eeEEeeccCCceeEEEEEEEEEeCCCC-CCCccce----EEEEEEeccCCCcCCCcceEEecCCCCCchH
Q 047816 146 NCDRERAQC-VYERKYAEMSSSSGVLGEDIISFGNES-DLKPQRA----VFGCENVETGDLYSQHADGIIGLGRGDLSVV 219 (620)
Q Consensus 146 ~c~~~~~~~-~~~~~Y~dg~~~~G~~~~D~v~lg~~~-~~~~~~~----~fg~~~~~~~~~~~~~~dGIlGLg~~~~s~~ 219 (620)
+......| .|.++|+||+.+.|.+++|+|++++.. ...+.++ .|||+..+.........|||||||++.+|++
T Consensus 73 -~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~~~~~dGIlGLg~~~~s~~ 151 (381)
T 1t6e_X 73 -SDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASLPRGSTGVAGLANSGLALP 151 (381)
T ss_dssp ------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTSCTTEEEEEECSSSTTSHH
T ss_pred -cCcCCCccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCCCCCCceEEEeCCCcchhH
Confidence 00011245 599999998888999999999998532 1344554 6799987632112356899999999999999
Q ss_pred HHHHHcCCcccceEEeecCCCCCCceEEECCCCCC-----CCceEeecCCC-CCCeeEEEEeEEEEccEEecCCCCccCC
Q 047816 220 DQLVEKGVISDSFSLCYGGMDVGGGAMVLGGISPP-----KDMVFTHSDPV-RSPYYNIDLKVIHVAGKPLPLNPKVFDG 293 (620)
Q Consensus 220 ~~L~~~g~I~~~FSl~l~~~~~~~G~l~fGgiD~~-----~~~~~~~~~~~-~~~~w~v~l~~i~v~g~~~~~~~~~~~~ 293 (620)
.||.++++++++||+||.+. .+|.|+|||+|.. ..+.|+++... ...+|.|.+++|+|+++.+.++...+.
T Consensus 152 ~ql~~~~~~~~~FS~~L~~~--~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~vg~~~~~~~~~~~~- 228 (381)
T 1t6e_X 152 AQVASAQKVANRFLLCLPTG--GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGALA- 228 (381)
T ss_dssp HHHHHHHTCCSEEEEECCSS--SCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEECCCCTTCSC-
T ss_pred HHHhhhcccCceEEEEeCCC--CCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEEcCEEecCCHHHcc-
Confidence 99999997779999999874 6799999998864 25677776542 234677999999999998876655443
Q ss_pred CCceEeeccceeeeecHHHHHHHHHHHHHHhhh-------cccccCCCCCCccccccCCCCCccccCCCCCeEEEEECCC
Q 047816 294 KHGTVLDSGTTYAYLPEAAFLAFKDAIMSELQS-------LKQIRGPDPNYNDICFSGAPSDVSQLSDTFPAVEMAFGNG 366 (620)
Q Consensus 294 ~~~ailDSGtt~~~LP~~~~~~i~~~l~~~~~~-------~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g 366 (620)
...+||||||++++||++++++|.+++.+++.. +.+.. ....+.+.|+.............+|+|+|+|++|
T Consensus 229 ~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~gg 307 (381)
T 1t6e_X 229 TGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAV-EAVAPFGVCYDTKTLGNNLGGYAVPNVQLGLDGG 307 (381)
T ss_dssp TTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEE-CCCTTCSCEEEGGGCCEETTEECCCCEEEEETTS
T ss_pred CCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccC-CCCCCCCccCCCCCCcccccCCcCCeEEEEECCC
Confidence 357999999999999999999999999887641 11110 1123457897542211111123789999999667
Q ss_pred cEEEeCCCCcEEEecccCCeEEEEEEecCC-------CCceeehHhhhceEEEEEeCCCCEEEEEecCC
Q 047816 367 QKLLLAPENYLFRHSKVRGAYCLGIFQNGR-------DPTTLLGGIIVRNTLVMYDREHSKIGFWKTNC 428 (620)
Q Consensus 367 ~~~~l~~~~yi~~~~~~~~~~Cl~~~~~~~-------~~~~ILG~~fLr~~yvvfD~en~rIGfA~~~c 428 (620)
++|+|++++|+++... +..|+++..... .+.||||+.|||++|+|||++|+|||||+++.
T Consensus 308 ~~~~l~~~~y~~~~~~--~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riGfA~~~~ 374 (381)
T 1t6e_X 308 SDWTMTGKNSMVDVKQ--GTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSRLPH 374 (381)
T ss_dssp CEEEECHHHHEEEEET--TEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEEECCT
T ss_pred cEEEeCCCeEEEEcCC--CeEEEEEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEEEecccC
Confidence 9999999999997643 678998766542 25799999999999999999999999998764
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=1.1e-39 Score=324.98 Aligned_cols=222 Identities=27% Similarity=0.430 Sum_probs=187.5
Q ss_pred eeeeccCCccceeEEEEEEecCCCcEEEEEEeCCCCceeEeCCCCC---CCCCCCCCCCCCCCCcccccccCcCCcccCC
Q 047816 73 RMRLYDDLLLNGYYTTRLWIGTPPQTFALIVDTGSTVTYVPCATCE---HCGDHQDPKFEPDLSSTYQPVKCNLYCNCDR 149 (620)
Q Consensus 73 ~~~l~~~~~~~~~Y~~~i~iGTP~Q~~~v~vDTGSs~~WV~~~~c~---~C~~~~~~~y~p~~SsT~~~~~c~~~c~c~~ 149 (620)
.++|.+. .+++|+++|.||||+|++.|++||||+++||+|..|. .|..+ +.|+|++|+||+..+
T Consensus 4 ~~~l~n~--~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~~--~~y~~~~SsT~~~~~--------- 70 (239)
T 1b5f_A 4 VVALTND--RDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRAH--SMYESSDSSTYKENG--------- 70 (239)
T ss_dssp EEEEEEE--TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHTS--CCBCGGGCTTCEEEE---------
T ss_pred eeeeeec--CCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCCC--CCCCCccCCCeeeCC---------
Confidence 3556553 3678999999999999999999999999999999996 68766 799999999999876
Q ss_pred CCCcceeEEeeccCCceeEEEEEEEEEeCCCCCCCccceEEEEEEeccCC-CcCCCcceEEecCCCCCc--hHHHHHHcC
Q 047816 150 ERAQCVYERKYAEMSSSSGVLGEDIISFGNESDLKPQRAVFGCENVETGD-LYSQHADGIIGLGRGDLS--VVDQLVEKG 226 (620)
Q Consensus 150 ~~~~~~~~~~Y~dg~~~~G~~~~D~v~lg~~~~~~~~~~~fg~~~~~~~~-~~~~~~dGIlGLg~~~~s--~~~~L~~~g 226 (620)
+.|.+.|++| ++.|.+++|+|++++ +.++++.||++..+.+. |.....+||||||++..+ ++++|++||
T Consensus 71 ----~~~~i~Yg~G-s~~G~~~~D~v~~g~---~~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~p~~~~l~~qg 142 (239)
T 1b5f_A 71 ----TFGAIIYGTG-SITGFFSQDSVTIGD---LVVKEQDFIEATDEADNVFLHRLFDGILGLSFQTISVPVWYNMLNQG 142 (239)
T ss_dssp ----EEEEEECSSC-EEEEEEEEEEEEETT---EEEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSSCCHHHHHHHTT
T ss_pred ----cEEEEEECCC-cEEEEEEEEEEEECC---cEEccEEEEEEEeccCccccccCcceEEecCccccccHHHHHHHHCC
Confidence 5799999995 489999999999998 67889999999876542 344568999999998875 788999999
Q ss_pred Ccc-cceEEeecCC--CCCCceEEECCCCCCCC---ceEeecCCCCCCeeEEEEeEEEEccEEecCCCCccCCCCceEee
Q 047816 227 VIS-DSFSLCYGGM--DVGGGAMVLGGISPPKD---MVFTHSDPVRSPYYNIDLKVIHVAGKPLPLNPKVFDGKHGTVLD 300 (620)
Q Consensus 227 ~I~-~~FSl~l~~~--~~~~G~l~fGgiD~~~~---~~~~~~~~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~~ailD 300 (620)
+|. ++||+||++. ....|.|+|||+|++++ +.|+++. ...+|.|.+++|.|+++.+.+.. ....++||
T Consensus 143 ~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~--~~~~~~v~l~~i~v~~~~~~~~~----~~~~aiiD 216 (239)
T 1b5f_A 143 LVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVT--YQYYWQFGIGDVLIGDKSTGFCA----PGCQAFAD 216 (239)
T ss_dssp CCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEE--EETTEEEEECCEEETTEECCTTT----TCEEEEEC
T ss_pred CCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEcc--cCCeEEEEeeEEEECCEEecccC----CCCEEEEe
Confidence 998 8999999874 24579999999999873 3444443 45799999999999998876432 34579999
Q ss_pred ccceeeeecHHHHHHHHHHHH
Q 047816 301 SGTTYAYLPEAAFLAFKDAIM 321 (620)
Q Consensus 301 SGtt~~~LP~~~~~~i~~~l~ 321 (620)
|||++++||++++++|.++++
T Consensus 217 TGTt~~~lP~~~~~~i~~~ig 237 (239)
T 1b5f_A 217 SGTSLLSGPTAIVTQINHAIG 237 (239)
T ss_dssp TTCSSEEECHHHHHHHHHHTT
T ss_pred cCcchhhCCHHHHHHHHHHhC
Confidence 999999999999999999874
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=1.5e-35 Score=295.70 Aligned_cols=221 Identities=23% Similarity=0.448 Sum_probs=178.9
Q ss_pred CCccceEEEEEEeccCC-CcCCCcceEEecCCCCC------chHHHHHHcCCcc-cceEEeecCCCCC--CceEEECCCC
Q 047816 183 LKPQRAVFGCENVETGD-LYSQHADGIIGLGRGDL------SVVDQLVEKGVIS-DSFSLCYGGMDVG--GGAMVLGGIS 252 (620)
Q Consensus 183 ~~~~~~~fg~~~~~~~~-~~~~~~dGIlGLg~~~~------s~~~~L~~~g~I~-~~FSl~l~~~~~~--~G~l~fGgiD 252 (620)
++++++.|||++.+.+. +.....+||||||++.. +++++|++||+|. +.||+||++.... +|.|+|||+|
T Consensus 3 ~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d 82 (241)
T 1lya_B 3 VKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTD 82 (241)
T ss_dssp EEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSCC
T ss_pred eEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCcC
Confidence 56789999999988664 44567899999999754 5899999999998 8999999986433 7999999999
Q ss_pred CCCC---ceEeecCCCCCCeeEEEEeEEEEccEEecCCCCccCCCCceEeeccceeeeecHHHHHHHHHHHHHHhhhccc
Q 047816 253 PPKD---MVFTHSDPVRSPYYNIDLKVIHVAGKPLPLNPKVFDGKHGTVLDSGTTYAYLPEAAFLAFKDAIMSELQSLKQ 329 (620)
Q Consensus 253 ~~~~---~~~~~~~~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~~ailDSGtt~~~LP~~~~~~i~~~l~~~~~~~~~ 329 (620)
++++ +.|+++ ....+|.|.+++|+|+++.+. ......+++||||+++++|++++++|.+++++...
T Consensus 83 ~~~~~g~l~~~p~--~~~~~~~v~l~~i~v~~~~~~-----~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~---- 151 (241)
T 1lya_B 83 SKYYKGSLSYLNV--TRKAYWQVHLDQVEVASGLTL-----CKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVPL---- 151 (241)
T ss_dssp GGGEEEEEEEEEC--SSBTTBEEEEEEEEETTSCEE-----STTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEE----
T ss_pred HHHcCCceEEEEC--ccccEEEEEEeEEEECCeeEe-----ccCCCEEEEECCCccccCCHHHHHHHHHHhCCeec----
Confidence 9874 344443 356899999999999987642 12456799999999999999999999999865421
Q ss_pred ccCCCCCCccccccCCCCCccccCCCCCeEEEEECCCcEEEeCCCCcEEEecccCCeEEEE-EEecC----CCCceeehH
Q 047816 330 IRGPDPNYNDICFSGAPSDVSQLSDTFPAVEMAFGNGQKLLLAPENYLFRHSKVRGAYCLG-IFQNG----RDPTTLLGG 404 (620)
Q Consensus 330 ~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~~~~yi~~~~~~~~~~Cl~-~~~~~----~~~~~ILG~ 404 (620)
..+.|..+|+. .+.+|+|+|+| +|.+++||+++|+++....++..|+. +.... ..+.||||+
T Consensus 152 ---~~g~~~~~C~~---------~~~~p~i~f~f-~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~ 218 (241)
T 1lya_B 152 ---IQGEYMIPCEK---------VSTLPAITLKL-GGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILGD 218 (241)
T ss_dssp ---ETTEEEEEGGG---------GGGSCCEEEEE-TTEEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEEECH
T ss_pred ---cCCcEEEECCC---------CccCCeEEEEE-CCEEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEEech
Confidence 23457778853 14789999999 89999999999999876544568986 44332 356899999
Q ss_pred hhhceEEEEEeCCCCEEEEEecC
Q 047816 405 IIVRNTLVMYDREHSKIGFWKTN 427 (620)
Q Consensus 405 ~fLr~~yvvfD~en~rIGfA~~~ 427 (620)
+|||++|+|||++|+|||||+++
T Consensus 219 ~fl~~~y~vfD~~~~~igfA~~~ 241 (241)
T 1lya_B 219 VFIGRYYTVFDRDNNRVGFAEAA 241 (241)
T ss_dssp HHHTTEEEEEETTTTEEEEEEEC
T ss_pred HHhcceEEEEECCCCEEEEEEcC
Confidence 99999999999999999999874
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.84 E-value=5.1e-21 Score=161.48 Aligned_cols=89 Identities=35% Similarity=0.551 Sum_probs=78.6
Q ss_pred eeeeccCCccceeEEEEEEecCCCcEEEEEEeCCCCceeEeCCCCC----CCCCCCCCCCCCCCCcccccccCcCCcccC
Q 047816 73 RMRLYDDLLLNGYYTTRLWIGTPPQTFALIVDTGSTVTYVPCATCE----HCGDHQDPKFEPDLSSTYQPVKCNLYCNCD 148 (620)
Q Consensus 73 ~~~l~~~~~~~~~Y~~~i~iGTP~Q~~~v~vDTGSs~~WV~~~~c~----~C~~~~~~~y~p~~SsT~~~~~c~~~c~c~ 148 (620)
.++|.+. .+++|+++|.||||+|++.|+|||||+++||+|..|. .|..+ +.|+|++|+||+..+
T Consensus 4 ~~~l~n~--~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~~--~~y~p~~SsT~~~~~-------- 71 (97)
T 1lya_A 4 PEVLKNY--MDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIH--HKYNSDKSSTYVKNG-------- 71 (97)
T ss_dssp EEEEEEE--TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHTS--CCBCGGGCTTCEEEE--------
T ss_pred eEeeEEC--CCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCCC--CCCCchhCCCceeCC--------
Confidence 3555543 3668999999999999999999999999999999997 68766 799999999999976
Q ss_pred CCCCcceeEEeeccCCceeEEEEEEEEEeCC
Q 047816 149 RERAQCVYERKYAEMSSSSGVLGEDIISFGN 179 (620)
Q Consensus 149 ~~~~~~~~~~~Y~dg~~~~G~~~~D~v~lg~ 179 (620)
|.|.+.|++|. +.|.+++|+|+|++
T Consensus 72 -----~~~~i~Yg~Gs-~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 72 -----TSFDIHYGSGS-LSGYLSQDTVSVPC 96 (97)
T ss_dssp -----EEEEEECSSCE-EEEEEEEEEEEESC
T ss_pred -----CcEEEEECCcE-EEEEEEEEEEEECC
Confidence 68999999965 89999999999987
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.63 E-value=3.4e-16 Score=129.52 Aligned_cols=82 Identities=24% Similarity=0.480 Sum_probs=66.7
Q ss_pred CCccccccCCCCCccccCCCCCeEEEEECCCcEEEeCCCCcEEEecccCCeEEEEEEecC----CCCceeehHhhhceEE
Q 047816 336 NYNDICFSGAPSDVSQLSDTFPAVEMAFGNGQKLLLAPENYLFRHSKVRGAYCLGIFQNG----RDPTTLLGGIIVRNTL 411 (620)
Q Consensus 336 ~~~~~C~~~~~~~~~~~~~~~P~i~f~f~~g~~~~l~~~~yi~~~~~~~~~~Cl~~~~~~----~~~~~ILG~~fLr~~y 411 (620)
.|.++|. .. +.+|+|+|+| +|++++|+|++|+++....+...|++.++.. .++.||||+.|||++|
T Consensus 2 ~y~v~C~--------~~-~~~P~i~f~~-gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y 71 (87)
T 1b5f_B 2 ELQVDCN--------TL-SSMPNVSFTI-GGKKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYH 71 (87)
T ss_dssp CCEECGG--------GG-GGCCCEEEEE-TTEEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEE
T ss_pred cEEEECC--------CC-CcCCcEEEEE-CCEEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHhccEE
Confidence 4667783 22 4689999999 8999999999999987544456898655542 3468999999999999
Q ss_pred EEEeCCCCEEEEEecC
Q 047816 412 VMYDREHSKIGFWKTN 427 (620)
Q Consensus 412 vvfD~en~rIGfA~~~ 427 (620)
+|||++|+|||||+++
T Consensus 72 ~vfD~~~~riGfA~~~ 87 (87)
T 1b5f_B 72 TVFDYGNLLVGFAEAA 87 (87)
T ss_dssp EEEETTTTEEEEEEEC
T ss_pred EEEECCCCEEEEEEcC
Confidence 9999999999999874
No 38
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=97.34 E-value=0.00021 Score=47.83 Aligned_cols=35 Identities=14% Similarity=0.132 Sum_probs=23.7
Q ss_pred ccccchhh-hhHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 047816 575 VKRTWWQE-HFLMVVLAITIMMVVGLSVFGILFILRRR 611 (620)
Q Consensus 575 ~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~~~~~r~r 611 (620)
+.+++++. +|+||++| .++ .++|++...|++||||
T Consensus 3 ~~~~~ls~GaIAGiVvG-~v~-gv~li~~l~~~~~rrr 38 (38)
T 2k1k_A 3 PVSRGLTGGEIVAVIFG-LLL-GAALLLGILVFRSRRA 38 (38)
T ss_dssp SSSTTCCHHHHHHHHHH-HHH-HHHHHHHHHHHHHCCC
T ss_pred CCCCCCCCCceeeeehH-HHH-HHHHHHHHHHHHeecC
Confidence 45667888 99999998 443 4444555556677665
No 39
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=96.64 E-value=0.0023 Score=43.97 Aligned_cols=29 Identities=14% Similarity=0.245 Sum_probs=15.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhhcc
Q 047816 583 HFLMVVLAITIMMVVGLSVFGILFILRRRRQ 613 (620)
Q Consensus 583 ~~~~i~~~~~~~~~~~l~~~~~~~~~r~r~~ 613 (620)
+|++-++| ++++++++. +++|++||||++
T Consensus 11 aIA~gVVg-Gv~~v~ii~-~~~~~~~RRRr~ 39 (44)
T 2l2t_A 11 LIAAGVIG-GLFILVIVG-LTFAVYVRRKSI 39 (44)
T ss_dssp HHHHHHHH-HHHHHHHHH-HHHHHHHHTTCS
T ss_pred eEEEeehH-HHHHHHHHH-HHHHHHhhhhhh
Confidence 56666665 455444444 444555555543
No 40
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=96.26 E-value=0.0036 Score=43.15 Aligned_cols=30 Identities=17% Similarity=0.419 Sum_probs=15.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhhccc
Q 047816 583 HFLMVVLAITIMMVVGLSVFGILFILRRRRQS 614 (620)
Q Consensus 583 ~~~~i~~~~~~~~~~~l~~~~~~~~~r~r~~~ 614 (620)
+|++-++| ++++++++. +++|++||||+++
T Consensus 12 ~IA~gVVg-Gv~~~~ii~-~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 12 SIATGMVG-ALLLLLVVA-LGIGLFMRRRHIV 41 (44)
T ss_dssp SSTHHHHH-HHHHHHHHH-HHHHHHHHTTTCC
T ss_pred eEEeehhH-HHHHHHHHH-HHHHHHhhhhHhh
Confidence 56666665 444444444 4455555555433
No 41
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=94.95 E-value=0.043 Score=37.59 Aligned_cols=8 Identities=13% Similarity=0.335 Sum_probs=5.9
Q ss_pred hhHHHHHH
Q 047816 583 HFLMVVLA 590 (620)
Q Consensus 583 ~~~~i~~~ 590 (620)
.|+++++|
T Consensus 13 ~Ia~~vVG 20 (44)
T 2jwa_A 13 SIISAVVG 20 (44)
T ss_dssp HHHHHHHH
T ss_pred chHHHHHH
Confidence 57777777
No 42
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=93.41 E-value=0.063 Score=47.86 Aligned_cols=30 Identities=20% Similarity=0.172 Sum_probs=26.1
Q ss_pred ceeEEEEEEecCCCcEEEEEEeCCCCceeEeC
Q 047816 83 NGYYTTRLWIGTPPQTFALIVDTGSTVTYVPC 114 (620)
Q Consensus 83 ~~~Y~~~i~iGTP~Q~~~v~vDTGSs~~WV~~ 114 (620)
.+.+++++.|+ ++++++++|||++.+-+..
T Consensus 24 ~~~~~v~v~In--G~~~~~LvDTGAs~s~is~ 53 (148)
T 2i1a_A 24 VPMLYINIEIN--NYPVKAFVDTGAQTTIMST 53 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred cceEEEEEEEC--CEEEEEEEECCCCccccCH
Confidence 45677999998 8999999999999988864
No 43
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=90.56 E-value=0.92 Score=40.11 Aligned_cols=27 Identities=15% Similarity=0.177 Sum_probs=24.9
Q ss_pred CceeehHhhhceEEEEEeCCCCEEEEE
Q 047816 398 PTTLLGGIIVRNTLVMYDREHSKIGFW 424 (620)
Q Consensus 398 ~~~ILG~~fLr~~yvvfD~en~rIGfA 424 (620)
...|||..||+++-+.+|++++++-|.
T Consensus 108 ~d~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 108 IDVLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp CSEEECHHHHHHTTCEEETTTTEEEET
T ss_pred CCeEecHHHHhhCCEEEECCCCEEEEc
Confidence 358999999999999999999999996
No 44
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=90.46 E-value=0.17 Score=34.30 Aligned_cols=10 Identities=50% Similarity=0.408 Sum_probs=4.8
Q ss_pred HHHHhhhhhh
Q 047816 602 FGILFILRRR 611 (620)
Q Consensus 602 ~~~~~~~r~r 611 (620)
++.|++||||
T Consensus 31 ~~~~~~~rRr 40 (41)
T 2k9y_A 31 GVGFFIHRRR 40 (41)
T ss_dssp HHHHSSSSSC
T ss_pred HHheeEeeec
Confidence 3345555544
No 45
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=90.31 E-value=0.3 Score=43.50 Aligned_cols=30 Identities=20% Similarity=0.120 Sum_probs=26.5
Q ss_pred CCceeehHhhhceEEEEEeCCCCEEEEEec
Q 047816 397 DPTTLLGGIIVRNTLVMYDREHSKIGFWKT 426 (620)
Q Consensus 397 ~~~~ILG~~fLr~~yvvfD~en~rIGfA~~ 426 (620)
+...|||..||+.+-.+.|++++++-|.+.
T Consensus 106 ~~d~LLGmD~L~~~~~~ID~~~~~L~l~~~ 135 (148)
T 3s8i_A 106 PMDMLLGLDMLRRHQCSIDLKKNVLVIGTT 135 (148)
T ss_dssp SSSEEECHHHHHHTTCEEETTTTEEECTTT
T ss_pred CcCeeccHHHHHhCCEEEEcCCCEEEEccC
Confidence 346899999999999999999999988754
No 46
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=88.22 E-value=0.49 Score=35.01 Aligned_cols=21 Identities=24% Similarity=0.317 Sum_probs=15.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHH
Q 047816 583 HFLMVVLAITIMMVVGLSVFGIL 605 (620)
Q Consensus 583 ~~~~i~~~~~~~~~~~l~~~~~~ 605 (620)
.++ |++| +++.++.+..+.++
T Consensus 9 ~~L-ivlG-g~~~lll~~glcI~ 29 (70)
T 2klu_A 9 MAL-IVLG-GVAGLLLFIGLGIF 29 (70)
T ss_dssp SHH-HHHH-HHHHHHHHHHHHHH
T ss_pred HHH-HHHh-HHHHHHHHHHHHHH
Confidence 344 7888 77777777777666
No 47
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=86.54 E-value=0.45 Score=42.36 Aligned_cols=35 Identities=20% Similarity=0.344 Sum_probs=28.0
Q ss_pred eEEEEEEecCCCcEEEEEEeCCCCceeEeCCCCCCCC
Q 047816 85 YYTTRLWIGTPPQTFALIVDTGSTVTYVPCATCEHCG 121 (620)
Q Consensus 85 ~Y~~~i~iGTP~Q~~~v~vDTGSs~~WV~~~~c~~C~ 121 (620)
.|++++.|. +++++++||||++.+.+....+..|+
T Consensus 24 ~l~v~~~In--g~~v~~LVDTGAs~s~Is~~~A~rlG 58 (148)
T 3s8i_A 24 MLYINCKVN--GHPLKAFVDSGAQMTIMSQACAERCN 58 (148)
T ss_dssp CCEEEEEET--TEEEEEEECTTCSSCEEEHHHHHHTT
T ss_pred EEEEEEEEC--CEEEEEEEeCCCCcEeeCHHHHHHcC
Confidence 467899998 99999999999999998754333443
No 48
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=85.41 E-value=0.9 Score=29.11 Aligned_cols=28 Identities=14% Similarity=0.265 Sum_probs=17.2
Q ss_pred hhh-hhHHHHHHHHHHHHHHHHHHHHHhhhh
Q 047816 580 WQE-HFLMVVLAITIMMVVGLSVFGILFILR 609 (620)
Q Consensus 580 ~~~-~~~~i~~~~~~~~~~~l~~~~~~~~~r 609 (620)
++. +++||++| -++ +.++++++.|++.|
T Consensus 4 L~~gaIaGIVvg-di~-~t~~i~~~vy~~~r 32 (33)
T 2l34_A 4 VSPGVLAGIVVG-DLV-LTVLIALAVYFLGR 32 (33)
T ss_dssp CCTHHHHHHHHH-HHH-HHHHHHHHHHHHCC
T ss_pred cCcceEEeEeHH-HHH-HHHHHHHHHhheec
Confidence 345 79999998 333 44455555566544
No 49
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=84.38 E-value=0.37 Score=31.19 Aligned_cols=12 Identities=25% Similarity=0.432 Sum_probs=5.7
Q ss_pred HHHHHHhhhhhh
Q 047816 600 SVFGILFILRRR 611 (620)
Q Consensus 600 ~~~~~~~~~r~r 611 (620)
+++++.+++|||
T Consensus 23 i~l~~~~~iRRr 34 (35)
T 1iij_A 23 LVVVVGILIKRR 34 (35)
T ss_dssp HTTTTTHHHHHC
T ss_pred HHHHhheEEeec
Confidence 334444555544
No 50
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=77.84 E-value=2.6 Score=34.54 Aligned_cols=26 Identities=27% Similarity=0.288 Sum_probs=23.3
Q ss_pred EEEEecCCCcEEEEEEeCCCCceeEeCC
Q 047816 88 TRLWIGTPPQTFALIVDTGSTVTYVPCA 115 (620)
Q Consensus 88 ~~i~iGTP~Q~~~v~vDTGSs~~WV~~~ 115 (620)
+.+.|| +|.++.++|||.+++-+...
T Consensus 11 vtvkI~--Gq~~eaLLDTGAD~TVl~~~ 36 (99)
T 2hs1_A 11 VTIKIG--GQLKEALLDTGADDTIIEEM 36 (99)
T ss_dssp EEEEET--TEEEEEEECTTCSSEEESCC
T ss_pred EEEEEC--CEEEEEEeccCCCcEEEecc
Confidence 579999 99999999999999998753
No 51
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=76.96 E-value=1.9 Score=33.71 Aligned_cols=24 Identities=29% Similarity=0.448 Sum_probs=11.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhh
Q 047816 584 FLMVVLAITIMMVVGLSVFGILFILR 609 (620)
Q Consensus 584 ~~~i~~~~~~~~~~~l~~~~~~~~~r 609 (620)
+++|++| +++.++|+.++++++||
T Consensus 10 ~~~Iv~g--vi~gilliGllllliwk 33 (79)
T 2knc_B 10 ILVVLLS--VMGAILLIGLAALLIWK 33 (79)
T ss_dssp SHHHHHH--HHHHHHHHHHHHHHHHH
T ss_pred chhhHHH--HHHHHHHHHHHHHHHHH
Confidence 3444443 33344445555556665
No 52
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=76.58 E-value=3.9 Score=25.98 Aligned_cols=19 Identities=21% Similarity=0.259 Sum_probs=12.8
Q ss_pred HHHHHHHHhhhhhhccccC
Q 047816 598 GLSVFGILFILRRRRQSVN 616 (620)
Q Consensus 598 ~l~~~~~~~~~r~r~~~~~ 616 (620)
-+..-++++.||-||.+.+
T Consensus 20 f~~lg~tflywrgrrhhhh 38 (40)
T 2l9u_A 20 FMMLGGTFLYWRGRRHHHH 38 (40)
T ss_dssp HHHHHHHHHHHHHHHHCCS
T ss_pred HHHhCceeEEEcccccccc
Confidence 3344568999998876544
No 53
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=76.08 E-value=2.5 Score=34.94 Aligned_cols=26 Identities=23% Similarity=0.415 Sum_probs=23.3
Q ss_pred EEEEEecCCCcEEEEEEeCCCCceeEeC
Q 047816 87 TTRLWIGTPPQTFALIVDTGSTVTYVPC 114 (620)
Q Consensus 87 ~~~i~iGTP~Q~~~v~vDTGSs~~WV~~ 114 (620)
.+.|.|| +|.++.++|||.+++-+..
T Consensus 10 ~v~v~I~--Gq~~e~LLDTGAD~TVl~~ 35 (104)
T 1fmb_A 10 TTIVLIN--DTPLNVLLDTGADTSVLTT 35 (104)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEcc
Confidence 3679999 9999999999999999873
No 54
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=73.69 E-value=3.9 Score=33.44 Aligned_cols=26 Identities=23% Similarity=0.351 Sum_probs=23.1
Q ss_pred EEEEecCCCcEEEEEEeCCCCceeEeCC
Q 047816 88 TRLWIGTPPQTFALIVDTGSTVTYVPCA 115 (620)
Q Consensus 88 ~~i~iGTP~Q~~~v~vDTGSs~~WV~~~ 115 (620)
+.+.|| +|.+..++|||.+++-+...
T Consensus 11 vti~I~--Gq~~e~LLDTGAD~TVl~~~ 36 (99)
T 3ec0_A 11 VTAYIE--GQPVEVLLDTGADDSIVAGI 36 (99)
T ss_dssp EEEEET--TEEEEEEECTTCSSCEESSC
T ss_pred EEEEEC--CEEEEEEEecCCCceEEcCc
Confidence 579999 99999999999999998643
No 55
>1s7q_A H-2KB, H-2 class I histocompatibility antigen, K-B alpha chain; LCMV, MHC class I, immune escape, immune system; 1.99A {Mus musculus} SCOP: b.1.1.2 d.19.1.1 PDB: 1s7r_A 1s7s_A 1s7t_A 1bii_A 3qul_A 1s7v_A 1s7w_A 1s7x_A 3quk_A 1s7u_A 1nez_A*
Probab=71.55 E-value=0.81 Score=46.90 Aligned_cols=30 Identities=10% Similarity=0.101 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHHH-HHHHHHHHhhhh-hhc
Q 047816 583 HFLMVVLAITIMMVV-GLSVFGILFILR-RRR 612 (620)
Q Consensus 583 ~~~~i~~~~~~~~~~-~l~~~~~~~~~r-~r~ 612 (620)
.|+||++|+++++++ ++.+++.+++|| ||+
T Consensus 282 ~~~~i~~~~~~l~~~~~~~~~~~~~~~~~k~~ 313 (348)
T 1s7q_A 282 SNMATVAVLVVLGAAIVTGAVVAFVMKMRRRN 313 (348)
T ss_dssp --------------------------------
T ss_pred cEEEEEeehhhHHHHhhheeEEEEEEEEEEec
Confidence 567887773222222 223334456677 543
No 56
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=65.84 E-value=5.3 Score=33.38 Aligned_cols=30 Identities=27% Similarity=0.507 Sum_probs=24.4
Q ss_pred EEEEec---CCCcEEEEEEeCCCCceeEeCCCC
Q 047816 88 TRLWIG---TPPQTFALIVDTGSTVTYVPCATC 117 (620)
Q Consensus 88 ~~i~iG---TP~Q~~~v~vDTGSs~~WV~~~~c 117 (620)
+.|.|| +|+|.+..++|||.++|-+....+
T Consensus 13 vtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~l 45 (116)
T 3liy_A 13 IKAQVDTQTSHPKTIEALLDTGADMTVIPIALF 45 (116)
T ss_dssp EEEEEECSSSCCEEEEEEECTTBSSCEEEGGGS
T ss_pred EEEEEccccCCCeEeEEEeccCCCccEEecccC
Confidence 456666 789999999999999999986443
No 57
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=64.48 E-value=5.8 Score=33.41 Aligned_cols=23 Identities=17% Similarity=0.465 Sum_probs=21.5
Q ss_pred EEecCCCcEEEEEEeCCCCceeEeC
Q 047816 90 LWIGTPPQTFALIVDTGSTVTYVPC 114 (620)
Q Consensus 90 i~iGTP~Q~~~v~vDTGSs~~WV~~ 114 (620)
|.|| +|.++.++|||.+++-+..
T Consensus 18 ikI~--Gq~~eaLLDTGAD~TVi~~ 40 (116)
T 2hah_A 18 IFVN--GYPIKFLLDTGADITVLNR 40 (116)
T ss_dssp EEET--TEEEEEEECTTCSSCEEEG
T ss_pred EEEC--CEEEEEEecCCCCcEEEcc
Confidence 9999 9999999999999999875
No 58
>1afo_A Glycophorin A; integral membrane protein, transmembrane helix interactions, membrane protein folding; NMR {Homo sapiens} SCOP: j.35.1.1 PDB: 2kpf_A
Probab=63.23 E-value=10 Score=24.83 Aligned_cols=29 Identities=14% Similarity=0.195 Sum_probs=18.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhhc
Q 047816 583 HFLMVVLAITIMMVVGLSVFGILFILRRRR 612 (620)
Q Consensus 583 ~~~~i~~~~~~~~~~~l~~~~~~~~~r~r~ 612 (620)
.++.|++| ..+.+++...+..+.|+|-++
T Consensus 11 ~i~lII~~-vmaGiIG~IllI~y~I~rl~K 39 (40)
T 1afo_A 11 EITLIIFG-VMAGVIGTILLISYGIRRLIK 39 (40)
T ss_dssp HHHHHHHH-HHHHHHHHHHHHHHHHHHHSC
T ss_pred hhHHHHHH-HHHHHHHHHHHHHHHHHHHhh
Confidence 56666666 555566666666777777654
No 59
>2k9j_B Integrin beta-3; transmembrane complex, cell adhesion, cleavage on basic residues, disease mutation, glycoprotein, pyrrolidone carboxylic acid; NMR {Homo sapiens} PDB: 2rmz_A 2rn0_A 2l91_A
Probab=60.15 E-value=9.8 Score=25.88 Aligned_cols=13 Identities=23% Similarity=0.291 Sum_probs=5.5
Q ss_pred HHHHHHHHHhhhh
Q 047816 597 VGLSVFGILFILR 609 (620)
Q Consensus 597 ~~l~~~~~~~~~r 609 (620)
+.|+.+.++++||
T Consensus 20 ivliGl~lLliwk 32 (43)
T 2k9j_B 20 ILLIGLAALLIWK 32 (43)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3333344444454
No 60
>2l6w_A Beta-type platelet-derived growth factor receptor; transmembrane helix, receptor tyrosine kinase, heptad repeat membrane protein; NMR {Homo sapiens}
Probab=63.66 E-value=2 Score=28.30 Aligned_cols=22 Identities=5% Similarity=0.327 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHhhhhhhccc
Q 047816 593 IMMVVGLSVFGILFILRRRRQS 614 (620)
Q Consensus 593 ~~~~~~l~~~~~~~~~r~r~~~ 614 (620)
..+++.++.++.+.+|||+.|.
T Consensus 17 l~vi~iisLIiLi~~w~qKPrY 38 (39)
T 2l6w_A 17 LVVLTIISLIILIMLWQKKPRY 38 (39)
Confidence 3344445666677888887664
No 61
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=58.14 E-value=9.2 Score=32.02 Aligned_cols=28 Identities=25% Similarity=0.584 Sum_probs=24.1
Q ss_pred EEEEEecCCCcEEEEEEeCCCCceeEeCCC
Q 047816 87 TTRLWIGTPPQTFALIVDTGSTVTYVPCAT 116 (620)
Q Consensus 87 ~~~i~iGTP~Q~~~v~vDTGSs~~WV~~~~ 116 (620)
.+.+.|| +|.+..++|||.+++-+...+
T Consensus 11 ~vti~I~--Gq~~eaLLDTGADdTVi~~~~ 38 (114)
T 3sqf_A 11 SLTLWLD--DKMFTGLINTGADVTIIKLED 38 (114)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEEGGG
T ss_pred eEEEEEC--CEEEEEEEccCCCceEEeccc
Confidence 3578999 999999999999999997543
No 62
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=53.67 E-value=22 Score=24.28 Aligned_cols=33 Identities=9% Similarity=-0.116 Sum_probs=22.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhhccccCCC
Q 047816 584 FLMVVLAITIMMVVGLSVFGILFILRRRRQSVNSY 618 (620)
Q Consensus 584 ~~~i~~~~~~~~~~~l~~~~~~~~~r~r~~~~~~~ 618 (620)
.-+|+. +++.-+++++++..++|-..||++..-
T Consensus 9 ~~aIA~--gVVgGv~~v~ii~~~~~~~~RRRr~~~ 41 (44)
T 2l2t_A 9 TPLIAA--GVIGGLFILVIVGLTFAVYVRRKSIKK 41 (44)
T ss_dssp SHHHHH--HHHHHHHHHHHHHHHHHHHHHTTCSSC
T ss_pred cceEEE--eehHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 344444 355567777788888888888876653
No 63
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=52.41 E-value=15 Score=31.57 Aligned_cols=27 Identities=26% Similarity=0.394 Sum_probs=23.6
Q ss_pred EEEEEecCCCcEEEEEEeCCCCceeEeCC
Q 047816 87 TTRLWIGTPPQTFALIVDTGSTVTYVPCA 115 (620)
Q Consensus 87 ~~~i~iGTP~Q~~~v~vDTGSs~~WV~~~ 115 (620)
.+.+.|+ +|.++.++|||.+++-+...
T Consensus 24 ~v~i~I~--G~~~~~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 24 RITLKVG--GQPVTFLVDTGAQHSVLTQN 50 (132)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred EEEEEEC--CEEEEEEEeCCCCeEEEccc
Confidence 4679999 99999999999999998753
No 64
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=48.78 E-value=11 Score=25.66 Aligned_cols=32 Identities=13% Similarity=-0.112 Sum_probs=20.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhhccccCC
Q 047816 584 FLMVVLAITIMMVVGLSVFGILFILRRRRQSVNS 617 (620)
Q Consensus 584 ~~~i~~~~~~~~~~~l~~~~~~~~~r~r~~~~~~ 617 (620)
..+|+.| ++..+++++++.+++|-..||++..
T Consensus 10 ~~~IA~g--VVgGv~~~~ii~~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 10 IPSIATG--MVGALLLLLVVALGIGLFMRRRHIV 41 (44)
T ss_dssp SSSSTHH--HHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred cceEEee--hhHHHHHHHHHHHHHHHHhhhhHhh
Confidence 3344443 5555666777787888877777654
No 65
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=43.21 E-value=23 Score=30.12 Aligned_cols=25 Identities=12% Similarity=0.225 Sum_probs=20.6
Q ss_pred EEecCCCcEEEEEEeCCCCceeEeCCC
Q 047816 90 LWIGTPPQTFALIVDTGSTVTYVPCAT 116 (620)
Q Consensus 90 i~iGTP~Q~~~v~vDTGSs~~WV~~~~ 116 (620)
+.|| +|.++.++|||.+++-+...+
T Consensus 25 ~~i~--gq~~eaLLDTGAD~TVl~~~~ 49 (124)
T 2rsp_A 25 VKQR--SVYITALLDSGADITIISEED 49 (124)
T ss_dssp CSCS--EEEEEEEECTTCSSCEEETTT
T ss_pred ccCC--CEEEEEEecCCCCcEEEeccc
Confidence 3366 899999999999999998643
No 66
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=42.21 E-value=20 Score=33.22 Aligned_cols=26 Identities=27% Similarity=0.299 Sum_probs=23.2
Q ss_pred EEEEEecCCCcEEEEEEeCCCCceeEeC
Q 047816 87 TTRLWIGTPPQTFALIVDTGSTVTYVPC 114 (620)
Q Consensus 87 ~~~i~iGTP~Q~~~v~vDTGSs~~WV~~ 114 (620)
.+.|.|| +|.+..++|||.+++-+..
T Consensus 10 ~vtv~I~--Gq~~e~LLDTGAD~TVl~~ 35 (203)
T 3ka2_A 10 LVTIRIG--GQLKEALLDTGADDTVIEE 35 (203)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEec
Confidence 4679999 9999999999999999864
No 67
>2jo1_A Phospholemman; FXYD1, Na,K-ATPase, micelle, hydrolase regulator; NMR {Homo sapiens}
Probab=40.14 E-value=56 Score=24.49 Aligned_cols=18 Identities=22% Similarity=0.506 Sum_probs=8.6
Q ss_pred hhHHHHHHHHHHHHHHHHH
Q 047816 583 HFLMVVLAITIMMVVGLSV 601 (620)
Q Consensus 583 ~~~~i~~~~~~~~~~~l~~ 601 (620)
-+.|.+.+ ++.+++++++
T Consensus 17 RiGGLifA-~vLfi~GI~i 34 (72)
T 2jo1_A 17 QIGGLVIA-GILFILGILI 34 (72)
T ss_dssp HHHHHHHH-HHHHHHHHHH
T ss_pred hccchHHH-HHHHHHHHHH
Confidence 35565555 4444444433
No 68
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=37.27 E-value=50 Score=23.53 Aligned_cols=6 Identities=33% Similarity=0.418 Sum_probs=2.7
Q ss_pred hhhhhh
Q 047816 606 FILRRR 611 (620)
Q Consensus 606 ~~~r~r 611 (620)
|+.|+|
T Consensus 35 FFKR~~ 40 (54)
T 2l8s_A 35 FFKRPL 40 (54)
T ss_dssp HTTSCC
T ss_pred cccCCC
Confidence 444444
No 69
>1q90_G Cytochrome B6F complex subunit PETG; membrane protein complex, photosynthesis, electron transfer, oxydoreductase, chlorophyll; HET: HEM CL1 BCR TDS SQD LFA LMG; 3.10A {Chlamydomonas reinhardtii} SCOP: f.23.26.1
Probab=36.63 E-value=50 Score=21.32 Aligned_cols=30 Identities=13% Similarity=0.089 Sum_probs=14.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhhcccc
Q 047816 583 HFLMVVLAITIMMVVGLSVFGILFILRRRRQSV 615 (620)
Q Consensus 583 ~~~~i~~~~~~~~~~~l~~~~~~~~~r~r~~~~ 615 (620)
.+-||++| .+.+.++-+.+. ++.+.||-++
T Consensus 5 lL~GIVlG-lipvtlaGLfv~--Ay~QyrRg~~ 34 (37)
T 1q90_G 5 LLCGIVLG-LVPVTIAGLFVT--AYLQYLRGDL 34 (37)
T ss_dssp HHHHHHHH-HHHHHHHHHHHH--HHHHHC----
T ss_pred hhhhHHHh-hHHHHHHHHHHH--HHHHHhhccc
Confidence 46799999 555554444443 3444444443
No 70
>2k9p_A Pheromone alpha factor receptor; GPCR, micelle, structurral biology, fragment, G-protein COUP receptor, glycoprotein, membrane; NMR {Saccharomyces cerevisiae}
Probab=35.18 E-value=34 Score=26.62 Aligned_cols=29 Identities=10% Similarity=0.139 Sum_probs=15.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhhc
Q 047816 583 HFLMVVLAITIMMVVGLSVFGILFILRRRR 612 (620)
Q Consensus 583 ~~~~i~~~~~~~~~~~l~~~~~~~~~r~r~ 612 (620)
.-.+|+.| +-..+-+++.++.|++-||||
T Consensus 19 ~~~~I~~G-~~iGAs~llliil~lltkkrr 47 (80)
T 2k9p_A 19 VTQAILFG-VRSGAAALTLIVVWITSRSRK 47 (80)
T ss_dssp HHHHHHHH-HHHHHHHHHHHHHHHHTCCSC
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHhcccc
Confidence 45566666 333344444455566666443
No 71
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=33.16 E-value=32 Score=27.66 Aligned_cols=18 Identities=22% Similarity=0.534 Sum_probs=15.3
Q ss_pred ceEeeccceeeeecHHHH
Q 047816 296 GTVLDSGTTYAYLPEAAF 313 (620)
Q Consensus 296 ~ailDSGtt~~~LP~~~~ 313 (620)
.++||||++.+++|...+
T Consensus 29 ~v~~DTGSs~lWv~~~~C 46 (97)
T 1lya_A 29 TVVFDTGSSNLWVPSIHC 46 (97)
T ss_dssp EEEEETTCCCEEEEBTTC
T ss_pred EEEEeCCCCceEEeEcCc
Confidence 589999999999996543
No 72
>2jp3_A FXYD domain-containing ION transport regulator 4; protein, transcription; NMR {Rattus norvegicus}
Probab=32.44 E-value=54 Score=24.33 Aligned_cols=16 Identities=6% Similarity=0.395 Sum_probs=7.4
Q ss_pred hhHHHHHHHHHHHHHHH
Q 047816 583 HFLMVVLAITIMMVVGL 599 (620)
Q Consensus 583 ~~~~i~~~~~~~~~~~l 599 (620)
-+.|.+.+ ++.+++++
T Consensus 18 RigGLifA-~vLfi~GI 33 (67)
T 2jp3_A 18 QLGGLIFG-GLLCIAGI 33 (67)
T ss_dssp HHHHHHHH-HHHHHHHH
T ss_pred eecchhhH-HHHHHHHH
Confidence 35555554 44444443
No 73
>2lx0_A Membrane fusion protein P14; membrane fusion protein transmembrane domain, P14 fast prote ARCH, micelle-peptide complex, membrane protein; NMR {Synthetic}
Probab=29.36 E-value=79 Score=18.90 Aligned_cols=23 Identities=13% Similarity=0.365 Sum_probs=13.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhh
Q 047816 584 FLMVVLAITIMMVVGLSVFGILFIL 608 (620)
Q Consensus 584 ~~~i~~~~~~~~~~~l~~~~~~~~~ 608 (620)
|+-++.| ++.++..++++.|++.
T Consensus 5 iweviag--lvalltflafgfwlfk 27 (32)
T 2lx0_A 5 IWEVIAG--LVALLTFLAFGFWLFK 27 (32)
T ss_dssp SHHHHHH--HHHHHHHHHHHHHHHH
T ss_pred HHHHHHH--HHHHHHHHHHHHHHHH
Confidence 4445554 5556666777777764
No 74
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=28.74 E-value=90 Score=22.23 Aligned_cols=7 Identities=43% Similarity=0.700 Sum_probs=3.2
Q ss_pred hhhhhhc
Q 047816 606 FILRRRR 612 (620)
Q Consensus 606 ~~~r~r~ 612 (620)
|+.|+|.
T Consensus 38 FFkR~~~ 44 (54)
T 2knc_A 38 FFKRNRP 44 (54)
T ss_dssp HTTTTCC
T ss_pred cccCCCC
Confidence 4444443
No 75
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=28.47 E-value=81 Score=21.45 Aligned_cols=31 Identities=16% Similarity=0.264 Sum_probs=16.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhhccc
Q 047816 584 FLMVVLAITIMMVVGLSVFGILFILRRRRQS 614 (620)
Q Consensus 584 ~~~i~~~~~~~~~~~l~~~~~~~~~r~r~~~ 614 (620)
.-.|+.|+..++++.++++++.+++|||+++
T Consensus 11 ~~~Ia~~vVGvll~vi~~l~~~~~~RRR~~~ 41 (44)
T 2jwa_A 11 LTSIISAVVGILLVVVLGVVFGILIKRRQQK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCSC
T ss_pred ccchHHHHHHHHHHHHHHHHHHhheehhhhh
Confidence 4456677555444444555555555655544
No 76
>2llm_A Amyloid beta A4 protein; alzheimer'S disease, protein fibril; NMR {Homo sapiens} PDB: 2loh_A
Probab=32.01 E-value=14 Score=24.85 Aligned_cols=10 Identities=0% Similarity=0.238 Sum_probs=6.0
Q ss_pred hh-hhHHHHHH
Q 047816 581 QE-HFLMVVLA 590 (620)
Q Consensus 581 ~~-~~~~i~~~ 590 (620)
|+ +++|..++
T Consensus 15 srga~iGL~v~ 25 (43)
T 2llm_A 15 NKGAIIGLMVG 25 (43)
Confidence 44 67776644
No 77
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=24.84 E-value=95 Score=20.32 Aligned_cols=28 Identities=14% Similarity=0.058 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhcc
Q 047816 585 LMVVLAITIMMVVGLSVFGILFILRRRRQ 613 (620)
Q Consensus 585 ~~i~~~~~~~~~~~l~~~~~~~~~r~r~~ 613 (620)
-|.++| .++.+++-+++...+++-..||
T Consensus 10 ~GaIAG-iVvG~v~gv~li~~l~~~~~rr 37 (38)
T 2k1k_A 10 GGEIVA-VIFGLLLGAALLLGILVFRSRR 37 (38)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCceee-eehHHHHHHHHHHHHHHHHeec
Confidence 344444 4444444455555555544433
No 78
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=24.14 E-value=73 Score=22.67 Aligned_cols=13 Identities=23% Similarity=0.232 Sum_probs=6.1
Q ss_pred HHHHHHHHHhhhh
Q 047816 597 VGLSVFGILFILR 609 (620)
Q Consensus 597 ~~l~~~~~~~~~r 609 (620)
+.|+++.++++|+
T Consensus 20 LLLL~Lii~~LwK 32 (54)
T 2l8s_A 20 LLLLMLLILALWK 32 (54)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3334444455554
No 79
>2zxe_G FXYD10, phospholemman-like protein; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_G*
Probab=23.37 E-value=63 Score=24.44 Aligned_cols=8 Identities=13% Similarity=0.339 Sum_probs=3.5
Q ss_pred hhHHHHHH
Q 047816 583 HFLMVVLA 590 (620)
Q Consensus 583 ~~~~i~~~ 590 (620)
-+.|.+.+
T Consensus 20 RigGLifA 27 (74)
T 2zxe_G 20 RVVGLIVA 27 (74)
T ss_dssp HHHHHHHH
T ss_pred eeccchhH
Confidence 34444443
No 80
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=23.14 E-value=83 Score=29.06 Aligned_cols=26 Identities=27% Similarity=0.299 Sum_probs=22.9
Q ss_pred EEEEEecCCCcEEEEEEeCCCCceeEeC
Q 047816 87 TTRLWIGTPPQTFALIVDTGSTVTYVPC 114 (620)
Q Consensus 87 ~~~i~iGTP~Q~~~v~vDTGSs~~WV~~ 114 (620)
.+.+.|| +|.+..++|||.+++-+..
T Consensus 114 ~~~iki~--Gq~~e~LlDTGAD~TVl~~ 139 (203)
T 3ka2_A 114 LVTIRIG--GQLKEALLDTGADDTVIEE 139 (203)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred cEEEEEC--CEEEeeeecccCCceeeec
Confidence 4678999 8999999999999999854
No 81
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=22.48 E-value=18 Score=41.67 Aligned_cols=14 Identities=7% Similarity=0.017 Sum_probs=0.0
Q ss_pred ccchhh-hhHHHHHH
Q 047816 577 RTWWQE-HFLMVVLA 590 (620)
Q Consensus 577 ~~~~~~-~~~~i~~~ 590 (620)
..+++. ++++|++|
T Consensus 699 ~~~l~~~aii~il~~ 713 (880)
T 1q55_A 699 VGGFDLPIILVILGS 713 (880)
T ss_dssp ---------------
T ss_pred ccCccHHHHHHHHHH
Confidence 345666 77777776
No 82
>1vf5_G Protein PET G; photosynthesis, membrane protein complex, electron transfer complex; HET: HEM TDS PL9 OPC CLA BCR; 3.00A {Mastigocladus laminosus} SCOP: f.23.26.1 PDB: 2d2c_G* 2e74_G* 2e75_G* 2e76_G* 2zt9_G*
Probab=22.08 E-value=50 Score=21.34 Aligned_cols=23 Identities=13% Similarity=0.135 Sum_probs=10.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHh
Q 047816 583 HFLMVVLAITIMMVVGLSVFGILF 606 (620)
Q Consensus 583 ~~~~i~~~~~~~~~~~l~~~~~~~ 606 (620)
.+-||++| .+.+.++-+.+..|+
T Consensus 5 lL~GIVlG-lipvtl~GLfv~Ay~ 27 (37)
T 1vf5_G 5 LLDGLVLG-LVFATLGGLFYAAYQ 27 (37)
T ss_dssp ----CHHH-HHHHHHHHHTHHHHH
T ss_pred hhhhHHHh-hHHHHHHHHHHHHHH
Confidence 35689998 555554444444443
No 83
>2jp3_A FXYD domain-containing ION transport regulator 4; protein, transcription; NMR {Rattus norvegicus}
Probab=21.98 E-value=53 Score=24.38 Aligned_cols=24 Identities=21% Similarity=0.231 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhh
Q 047816 586 MVVLAITIMMVVGLSVFGILFILRR 610 (620)
Q Consensus 586 ~i~~~~~~~~~~~l~~~~~~~~~r~ 610 (620)
.+=+| +++++.+|.++++++|.-+
T Consensus 16 tLRig-GLifA~vLfi~GI~iilS~ 39 (67)
T 2jp3_A 16 SLQLG-GLIFGGLLCIAGIALALSG 39 (67)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHTT
T ss_pred Hheec-chhhHHHHHHHHHHHHHcC
Confidence 44467 7777777777776665443
No 84
>2lp1_A C99; alzheimer'S D membrane protein, transmembrane Pro; NMR {Homo sapiens}
Probab=27.19 E-value=19 Score=29.74 Aligned_cols=8 Identities=0% Similarity=0.218 Sum_probs=4.9
Q ss_pred hhHHHHHH
Q 047816 583 HFLMVVLA 590 (620)
Q Consensus 583 ~~~~i~~~ 590 (620)
+++|..+|
T Consensus 31 a~igL~v~ 38 (122)
T 2lp1_A 31 AIIGLMVG 38 (122)
Confidence 56676654
No 85
>2lk9_A Bone marrow stromal antigen 2; membrane, micelle, antiviral protein-immune system complex; NMR {Homo sapiens}
Probab=21.44 E-value=98 Score=19.55 Aligned_cols=10 Identities=30% Similarity=0.554 Sum_probs=2.8
Q ss_pred HHHHHhhhhh
Q 047816 601 VFGILFILRR 610 (620)
Q Consensus 601 ~~~~~~~~r~ 610 (620)
...+++..|.
T Consensus 22 V~LI~f~~kA 31 (35)
T 2lk9_A 22 VPLIIFTIKK 31 (35)
T ss_dssp HHHHHHC---
T ss_pred chheEEeeec
Confidence 3334444443
No 86
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=20.83 E-value=92 Score=22.17 Aligned_cols=13 Identities=15% Similarity=0.135 Sum_probs=5.9
Q ss_pred HHHHHHHHHhhhh
Q 047816 597 VGLSVFGILFILR 609 (620)
Q Consensus 597 ~~l~~~~~~~~~r 609 (620)
+.|+++.++++|+
T Consensus 23 LllL~li~~~LwK 35 (54)
T 2knc_A 23 LLLLTILVLAMWK 35 (54)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3334444455554
Done!