Query 047819
Match_columns 114
No_of_seqs 112 out of 1073
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 05:27:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047819.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047819hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gla_A Low molecular weight he 100.0 8.5E-31 2.9E-35 163.7 13.7 98 2-100 3-100 (100)
2 1gme_A Heat shock protein 16.9 100.0 6E-31 2E-35 175.5 10.5 110 2-113 42-151 (151)
3 4eld_A MJ16.5-P1, small heat s 100.0 2.1E-29 7.1E-34 169.5 11.9 104 4-112 57-161 (161)
4 4fei_A Heat shock protein-rela 100.0 4.7E-29 1.6E-33 156.5 11.6 95 2-102 5-99 (102)
5 3l1e_A Alpha-crystallin A chai 99.9 1.7E-26 5.7E-31 145.8 12.9 102 3-112 2-105 (106)
6 3aab_A Putative uncharacterize 99.9 5.5E-27 1.9E-31 151.4 10.6 93 2-99 23-117 (123)
7 2wj5_A Heat shock protein beta 99.9 3.2E-26 1.1E-30 143.4 11.8 90 5-102 3-93 (101)
8 3q9p_A Heat shock protein beta 99.9 5.9E-25 2E-29 133.7 10.9 82 8-97 2-84 (85)
9 2y1y_A Alpha-crystallin B chai 99.9 4.8E-24 1.6E-28 130.9 11.4 85 10-102 3-88 (90)
10 2klr_A Alpha-crystallin B chai 99.9 4.1E-24 1.4E-28 145.4 10.6 96 6-112 66-162 (175)
11 2bol_A TSP36, small heat shock 99.9 5.7E-23 2E-27 150.6 10.8 91 2-101 97-192 (314)
12 2bol_A TSP36, small heat shock 99.9 9.2E-22 3.1E-26 144.2 9.9 88 6-98 223-314 (314)
13 2xcm_C SGT1-like protein, cyto 99.3 2.1E-11 7.3E-16 74.0 7.5 82 2-99 1-82 (92)
14 1rl1_A Suppressor of G2 allele 99.2 4.4E-11 1.5E-15 75.5 8.6 81 3-99 9-89 (114)
15 2k8q_A Protein SHQ1; beta-sand 98.8 9.5E-09 3.2E-13 66.5 7.1 80 1-101 1-85 (134)
16 3eud_A Protein SHQ1; CS domain 98.8 2E-07 6.8E-12 58.6 11.3 81 1-102 15-100 (115)
17 3igf_A ALL4481 protein; two-do 98.7 8.8E-08 3E-12 71.6 8.2 70 4-96 298-368 (374)
18 1x5m_A Calcyclin-binding prote 98.3 2.4E-05 8.2E-10 50.0 10.9 80 4-99 21-104 (127)
19 1ejf_A Progesterone receptor P 98.2 2.3E-05 7.8E-10 49.9 9.8 81 2-99 2-82 (125)
20 1wh0_A Ubiquitin carboxyl-term 98.2 1.9E-05 6.5E-10 51.1 9.1 88 3-99 19-112 (134)
21 1wgv_A KIAA1068 protein; CS do 98.1 6.7E-05 2.3E-09 47.6 10.2 80 3-98 19-101 (124)
22 2o30_A Nuclear movement protei 98.0 9.1E-05 3.1E-09 47.5 9.7 76 3-98 4-80 (131)
23 3qor_A Nuclear migration prote 97.9 8.9E-05 3E-09 47.0 8.5 78 3-99 16-97 (121)
24 2rh0_A NUDC domain-containing 97.9 0.00024 8.3E-09 46.9 10.7 77 3-99 13-91 (157)
25 1wfi_A Nuclear distribution ge 97.9 0.00015 5E-09 46.4 9.2 78 3-99 7-88 (131)
26 2kmw_A Uncharacterized protein 97.6 0.00025 8.7E-09 46.6 7.6 78 3-99 4-82 (150)
27 2cg9_X CO-chaperone protein SB 97.6 5E-05 1.7E-09 49.0 3.5 85 3-99 6-98 (134)
28 3q9p_A Heat shock protein beta 89.3 1.3 4.3E-05 25.6 5.6 33 65-98 8-40 (85)
29 3l1e_A Alpha-crystallin A chai 84.7 2.1 7.3E-05 25.7 4.9 33 64-97 12-44 (106)
30 4fei_A Heat shock protein-rela 84.5 2.5 8.7E-05 25.1 5.1 34 14-48 62-96 (102)
31 3gla_A Low molecular weight he 84.0 2.5 8.6E-05 24.8 4.9 32 14-46 65-97 (100)
32 2y1y_A Alpha-crystallin B chai 83.5 3 0.0001 24.2 5.0 33 65-98 7-39 (90)
33 2wj5_A Heat shock protein beta 81.5 4.4 0.00015 24.0 5.4 33 65-98 12-44 (101)
34 3aab_A Putative uncharacterize 78.3 6.4 0.00022 24.1 5.5 35 64-99 34-69 (123)
35 4eld_A MJ16.5-P1, small heat s 77.6 7.6 0.00026 24.9 6.0 35 64-99 66-100 (161)
36 1gme_A Heat shock protein 16.9 72.5 7.5 0.00026 24.8 4.9 34 13-47 104-138 (151)
37 2klr_A Alpha-crystallin B chai 69.5 9.9 0.00034 25.0 5.0 34 64-98 73-106 (175)
38 2nwt_A UPF0165 protein AF_2212 62.4 6.4 0.00022 22.2 2.5 15 79-93 3-17 (69)
39 2cql_A OK/SW-CL.103, 60S ribos 56.9 23 0.00077 21.1 4.5 18 26-44 20-37 (100)
40 1n91_A ORF, hypothetical prote 56.9 30 0.001 21.0 5.2 38 8-47 8-46 (108)
41 1nkw_E 50S ribosomal protein L 56.5 38 0.0013 23.1 6.1 46 26-97 39-84 (212)
42 1rl6_A Protein (ribosomal prot 56.4 29 0.00099 22.9 5.4 45 26-96 11-55 (177)
43 2o30_A Nuclear movement protei 52.1 39 0.0013 20.8 5.6 31 64-94 14-44 (131)
44 3j21_F 50S ribosomal protein L 51.9 29 0.00098 23.1 4.8 44 26-94 14-57 (184)
45 1vq8_E 50S ribosomal protein L 50.8 34 0.0012 22.6 5.0 45 27-96 10-54 (178)
46 2uwa_A Cellulase; glycoside hy 46.4 39 0.0013 23.7 5.1 43 25-75 31-74 (274)
47 3iln_A Laminarinase; jelly ROW 45.9 38 0.0013 23.2 4.9 44 31-75 49-97 (251)
48 4awd_A Beta-porphyranase; hydr 44.9 54 0.0019 23.6 5.7 48 25-75 85-145 (324)
49 1ew4_A CYAY protein; friedreic 44.5 12 0.00042 22.6 1.9 16 80-95 29-44 (106)
50 2rh0_A NUDC domain-containing 43.6 61 0.0021 20.6 6.0 32 63-94 22-53 (157)
51 3oeq_A Frataxin homolog, mitoc 42.3 20 0.00068 22.4 2.7 16 81-96 49-64 (123)
52 2hyk_A Beta-1,3-glucanase; fam 41.9 30 0.001 23.4 3.9 44 31-75 52-99 (245)
53 3qqz_A Putative uncharacterize 41.6 84 0.0029 21.6 8.0 69 15-92 13-85 (255)
54 3v2d_H 50S ribosomal protein L 41.6 65 0.0022 21.2 5.3 43 26-94 12-54 (180)
55 3qor_A Nuclear migration prote 40.7 59 0.002 19.6 5.3 35 61-95 23-59 (121)
56 1ulv_A Glucodextranase; GH fam 40.6 50 0.0017 27.7 5.5 92 4-99 809-916 (1020)
57 1wgv_A KIAA1068 protein; CS do 40.1 61 0.0021 19.6 5.4 33 63-95 28-61 (124)
58 2ks0_A Uncharacterized protein 37.1 24 0.00081 19.8 2.2 22 23-45 17-38 (71)
59 2hbp_A Cytoskeleton assembly c 36.7 22 0.00074 19.9 2.0 33 7-39 7-39 (68)
60 3iz5_F 60S ribosomal protein L 35.2 98 0.0034 20.6 5.7 45 26-95 13-59 (190)
61 2kgs_A Uncharacterized protein 33.3 38 0.0013 21.0 3.0 27 21-48 2-28 (132)
62 2ayh_A 1,3-1,4-beta-D-glucan 4 32.4 56 0.0019 21.6 3.9 43 31-74 39-83 (214)
63 3u5e_H L8, RP24, YL11, 60S rib 30.8 1.2E+02 0.0041 20.2 5.6 46 26-96 13-59 (191)
64 3t3l_A Frataxin, mitochondrial 30.7 31 0.0011 21.6 2.2 17 79-95 40-56 (129)
65 1wfi_A Nuclear distribution ge 29.5 98 0.0033 18.8 5.1 32 64-95 17-50 (131)
66 1dyp_A Kappa-carrageenase; hyd 28.7 1.4E+02 0.0048 20.3 6.3 20 25-47 44-63 (271)
67 3e9t_A Na/Ca exchange protein; 28.7 80 0.0027 18.8 3.9 34 1-34 7-40 (114)
68 2zkr_e 60S ribosomal protein L 28.3 90 0.0031 20.8 4.3 52 20-96 7-61 (192)
69 2dsy_A Hypothetical protein TT 26.4 16 0.00053 21.1 0.2 19 6-24 20-39 (87)
70 3elx_A Ileal bIle acid-binding 26.2 33 0.0011 21.6 1.8 31 2-32 38-68 (138)
71 4ate_A Beta-porphyranase A; hy 25.9 1.3E+02 0.0045 20.8 5.0 45 26-73 55-111 (266)
72 3i4i_A 1,3-1,4-beta-glucanase; 25.7 1.1E+02 0.0037 20.8 4.5 41 31-74 57-103 (234)
73 2vy0_A Endo-beta-1,3-glucanase 24.2 1.2E+02 0.0042 20.5 4.6 44 31-75 59-113 (264)
74 3fso_A Integrin beta-4, GP150; 24.2 1E+02 0.0035 18.6 3.8 34 1-34 10-43 (123)
75 3o5s_A Beta-glucanase; glycosy 23.7 1.4E+02 0.0048 20.3 4.8 43 31-74 63-107 (238)
76 3bbo_I Ribosomal protein L6; l 23.1 42 0.0014 23.1 1.9 45 26-96 54-99 (223)
77 3ead_A Na/Ca exchange protein; 23.0 1.1E+02 0.0039 18.7 3.9 34 1-34 9-42 (137)
78 2k0r_A Thiol:disulfide interch 22.9 1.4E+02 0.0048 18.3 5.4 32 5-36 16-50 (128)
79 1vd2_A Protein kinase C, IOTA 22.7 54 0.0018 19.1 2.1 17 80-96 8-24 (89)
80 2gjh_A Designed protein; oblig 22.5 83 0.0029 16.4 2.6 22 25-47 31-52 (62)
81 1q5l_A Chaperone protein DNAK; 22.1 1.4E+02 0.0049 18.2 5.2 29 80-112 99-130 (135)
82 1nvp_C Transcription initiatio 22.1 37 0.0013 19.3 1.3 15 78-92 46-60 (76)
83 3rq0_A Glycosyl hydrolases fam 22.0 62 0.0021 22.7 2.7 36 31-73 91-134 (269)
84 1eal_A Gastrotropin, ileal lip 21.8 1.1E+02 0.0037 18.7 3.5 25 2-26 34-58 (127)
85 4atf_A Beta-agarase B; hydrola 21.8 96 0.0033 22.2 3.7 47 25-74 72-121 (308)
86 3kwr_A Putative RNA-binding pr 21.4 32 0.0011 20.4 0.9 17 8-24 15-32 (97)
87 1o4z_A Beta-agarase B; glycosi 21.3 1.1E+02 0.0038 22.1 4.0 47 26-75 104-153 (346)
88 3jx8_A Putative lipoprotein; s 20.8 1.1E+02 0.0039 20.6 3.8 38 7-45 35-72 (250)
No 1
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.97 E-value=8.5e-31 Score=163.68 Aligned_cols=98 Identities=33% Similarity=0.484 Sum_probs=91.4
Q ss_pred CcceeeEEeCCCeEEEEEEcCCCCCCCEEEEEeCCcEEEEEEEEecccccCcccEEEeeeeeeEEEEEEECCCCcccCce
Q 047819 2 IPTRIDWDDTPEFHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHCLEVVVGKFSRRFQLLENAMVDRI 81 (114)
Q Consensus 2 ~~p~~dv~e~~~~~~i~~~lPG~~~~di~v~~~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i 81 (114)
+.|++||.|++++|+|.++|||+++++|+|.+.++ .|.|+|++..........|+++|+.+|.|.|+|.||.++|.+++
T Consensus 3 ~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~-~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~~i 81 (100)
T 3gla_A 3 WVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDKG-ILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADGI 81 (100)
T ss_dssp SCCCEEEEECSSEEEEEEECTTSCGGGCEEEEETT-EEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTTSC
T ss_pred ccCcEEEEECCCEEEEEEECCCCCHHHEEEEEECC-EEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcChHHe
Confidence 68999999999999999999999999999999986 99999999988777788999999999999999999999999999
Q ss_pred eEEEeCCEEEEEEeeeCCC
Q 047819 82 TAHIANSTLTVTIRKKDIK 100 (114)
Q Consensus 82 ~a~~~~GvL~I~ipK~~~~ 100 (114)
+|+|+||+|+|++||..++
T Consensus 82 ~A~~~~GvL~I~~pK~~~a 100 (100)
T 3gla_A 82 TAAGRNGVLEIRIPKRPAA 100 (100)
T ss_dssp EEEEETTEEEEEEEBC---
T ss_pred EEEEeCCEEEEEEecCCCC
Confidence 9999999999999998753
No 2
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.97 E-value=6e-31 Score=175.53 Aligned_cols=110 Identities=51% Similarity=0.834 Sum_probs=100.5
Q ss_pred CcceeeEEeCCCeEEEEEEcCCCCCCCEEEEEeCCcEEEEEEEEecccccCcccEEEeeeeeeEEEEEEECCCCcccCce
Q 047819 2 IPTRIDWDDTPEFHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHCLEVVVGKFSRRFQLLENAMVDRI 81 (114)
Q Consensus 2 ~~p~~dv~e~~~~~~i~~~lPG~~~~di~v~~~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i 81 (114)
+.|++||+|++++|+|.++|||+++++|+|.+.+++.|+|+|++......++..|+++|+.+|.|.|+|.||.++|.+++
T Consensus 42 ~~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i 121 (151)
T 1gme_A 42 ANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEV 121 (151)
T ss_dssp GGGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGGGC
T ss_pred cCCceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCccccce
Confidence 46999999999999999999999999999999644599999999887777788999999999999999999999999999
Q ss_pred eEEEeCCEEEEEEeeeCCCCCCCCceEEEEee
Q 047819 82 TAHIANSTLTVTIRKKDIKKHHGHSRSIKIIG 113 (114)
Q Consensus 82 ~a~~~~GvL~I~ipK~~~~~~~~~~~~I~I~~ 113 (114)
+|+|+||+|+|++||..+..+ ..++|+|+|
T Consensus 122 ~A~~~nGvL~I~lPK~~~~~~--~~~~I~I~~ 151 (151)
T 1gme_A 122 KAGLENGVLTVTVPKAEVKKP--EVKAIQISG 151 (151)
T ss_dssp EEEEETTEEEEEEECCCCCTT--CCCCCCCCC
T ss_pred EEEEECCEEEEEEEccCcCCC--CCeEeeeCC
Confidence 999999999999999987665 568888875
No 3
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.96 E-value=2.1e-29 Score=169.53 Aligned_cols=104 Identities=17% Similarity=0.164 Sum_probs=96.0
Q ss_pred ceeeEEeCCCeEEEEEEcCCCCCCCEEEEEeCCcEEEEEEEEecccccCcccEEEeee-eeeEEEEEEECCCCcccCcee
Q 047819 4 TRIDWDDTPEFHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHCLEV-VVGKFSRRFQLLENAMVDRIT 82 (114)
Q Consensus 4 p~~dv~e~~~~~~i~~~lPG~~~~di~v~~~~~~~L~I~g~~~~~~~~~~~~~~~~e~-~~~~f~r~~~lP~~vd~~~i~ 82 (114)
+++||.|++++|+|.++|||++++||+|.++++ .|+|+|++......++..++++|+ .+|.|.|+|.||.++|.++++
T Consensus 57 ~pvdi~e~~~~~~v~~dlPG~~~edi~V~~~~~-~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~i~ 135 (161)
T 4eld_A 57 MPISIIEGDQHIKVIAWLPGVNKEDIILNAVGD-TLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENAS 135 (161)
T ss_dssp CCEEEEECSSEEEEEEECTTCCGGGEEEEEETT-EEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGGCE
T ss_pred cceeEEEeCCEEEEEEECCCCChHhEEEEEECC-EEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcccccEE
Confidence 349999999999999999999999999999986 999999998766666778999999 999999999999999999999
Q ss_pred EEEeCCEEEEEEeeeCCCCCCCCceEEEEe
Q 047819 83 AHIANSTLTVTIRKKDIKKHHGHSRSIKII 112 (114)
Q Consensus 83 a~~~~GvL~I~ipK~~~~~~~~~~~~I~I~ 112 (114)
|+|+||+|+|++||...+.+ |+|+|+
T Consensus 136 A~~~nGvL~I~lpK~~~~~~----r~I~Ie 161 (161)
T 4eld_A 136 AKFENGVLSVILPKAESSIK----KGINIE 161 (161)
T ss_dssp EEEETTEEEEEEEBCGGGSC----CCCCCC
T ss_pred EEEECCEEEEEEEcCCCCCC----cEeecC
Confidence 99999999999999887776 888875
No 4
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.96 E-value=4.7e-29 Score=156.47 Aligned_cols=95 Identities=23% Similarity=0.269 Sum_probs=87.9
Q ss_pred CcceeeEEeCCCeEEEEEEcCCCCCCCEEEEEeCCcEEEEEEEEecccccCcccEEEeeeeeeEEEEEEECCCCcccCce
Q 047819 2 IPTRIDWDDTPEFHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHCLEVVVGKFSRRFQLLENAMVDRI 81 (114)
Q Consensus 2 ~~p~~dv~e~~~~~~i~~~lPG~~~~di~v~~~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i 81 (114)
+.|++||.|++++|+|.++|||+++++|+|.++++ .|.|+|+++. ...|+++|+.+|.|.|+|.||.++|.+.+
T Consensus 5 ~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~-~L~I~g~~~~-----~~~~~~~er~~g~f~R~~~LP~~vd~~~i 78 (102)
T 4fei_A 5 WTPAADWRDAGTHLDLLLDVPGVDAGTLALAEDGG-QLTVSGERPG-----TEHLLRSERPSGRFVRELAFPEPVRPASG 78 (102)
T ss_dssp CCCCEEEEEETTEEEEEEECTTCCGGGCEEEEETT-EEEEEEEECC-----CSSCSSCCSEEEEEEEEEECSSCBCTTCC
T ss_pred ccCcEEEEEcCCEEEEEEECCCCchHhEEEEEECC-EEEEEEEEec-----CCCEEEEEEeccEEEEEEECCCCcchhHc
Confidence 68999999999999999999999999999999986 9999999853 35678889999999999999999999999
Q ss_pred eEEEeCCEEEEEEeeeCCCCC
Q 047819 82 TAHIANSTLTVTIRKKDIKKH 102 (114)
Q Consensus 82 ~a~~~~GvL~I~ipK~~~~~~ 102 (114)
+|+|+||+|+|++||..++..
T Consensus 79 ~A~~~~GvL~I~lpK~~~~~d 99 (102)
T 4fei_A 79 VASLAGGVLTVRFEKLRPTID 99 (102)
T ss_dssp EEEEETTEEEEEEEBSSCCCC
T ss_pred EEEEECCEEEEEEEccCcccc
Confidence 999999999999999987553
No 5
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.94 E-value=1.7e-26 Score=145.80 Aligned_cols=102 Identities=18% Similarity=0.244 Sum_probs=85.2
Q ss_pred cceeeEEeCCCeEEEEEEcCCCCCCCEEEEEeCCcEEEEEEEEecccccCcccEEEeeeeeeEEEEEEECCCCcccCcee
Q 047819 3 PTRIDWDDTPEFHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHCLEVVVGKFSRRFQLLENAMVDRIT 82 (114)
Q Consensus 3 ~p~~dv~e~~~~~~i~~~lPG~~~~di~v~~~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i~ 82 (114)
+...+|+|++++|.|.++||||+++||+|.+.++ .|.|+|++..... ...|++ +.|.|+|.||.++|.++++
T Consensus 2 sg~~~i~e~~~~~~v~~dlPG~~~edi~V~v~~~-~L~I~g~~~~~~~--~~~~~~-----~eF~R~~~LP~~vd~~~i~ 73 (106)
T 3l1e_A 2 SGISEVRSDRDKFVIFLDVKHFSPEDLTVKVQED-FVEIHGKHNERQD--DHGYIS-----REFHRRYRLPSNVDQSALS 73 (106)
T ss_dssp CCSEEEEECSSEEEEEEECTTSCGGGEEEEEETT-EEEEEEEEEEEET--TTEEEE-----EEEEEEEECCTTBCTTSCE
T ss_pred CCceEEEEcCCEEEEEEECCCCChHHEEEEEECC-EEEEEEEEccccC--CCCEEE-----EEEEEEEECCCCcChhHcE
Confidence 3467999999999999999999999999999986 9999999765432 233433 3599999999999999999
Q ss_pred EEE-eCCEEEEEEeeeCCCCC-CCCceEEEEe
Q 047819 83 AHI-ANSTLTVTIRKKDIKKH-HGHSRSIKII 112 (114)
Q Consensus 83 a~~-~~GvL~I~ipK~~~~~~-~~~~~~I~I~ 112 (114)
|+| +||+|+|++||..+..+ ....|+|+|+
T Consensus 74 A~~s~~GvL~I~~PK~~~~~~~~~~~r~I~I~ 105 (106)
T 3l1e_A 74 CSLSADGMLTFSGPKIPSGVDAGHSERAIPVS 105 (106)
T ss_dssp EEECTTSEEEEEEEBCCCCTTTTSSSCCCCCC
T ss_pred EEECCCCEEEEEEEccCcccccCCCCeEeeec
Confidence 999 89999999999987531 1256889885
No 6
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.94 E-value=5.5e-27 Score=151.41 Aligned_cols=93 Identities=22% Similarity=0.272 Sum_probs=86.5
Q ss_pred CcceeeEEeCCCeEEEEEEcCCCCCCCEEEEEeC-CcEEEEEEEEecccccCcccEEEeeeeeeEEEEEEECCCCcccCc
Q 047819 2 IPTRIDWDDTPEFHVFKADLSGFHKHDVKVEIED-GRVLCISGEKKIEKEERTDEGHCLEVVVGKFSRRFQLLENAMVDR 80 (114)
Q Consensus 2 ~~p~~dv~e~~~~~~i~~~lPG~~~~di~v~~~~-~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~ 80 (114)
+.|++||.+++++|.|.++|||+++++|+|.+.+ + .|+|+|++.... ++.|+++|+.+ .|.|+|.||.++|.++
T Consensus 23 ~~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~-~L~I~g~~~~~~---~~~~~~~Er~~-~f~R~~~LP~~vd~~~ 97 (123)
T 3aab_A 23 VYPPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQN-ELIIEAEREITE---PGVKYLTQRPK-YVRKVIRLPYNVAKDA 97 (123)
T ss_dssp HCSCEEEEEETTEEEEEEECCSCCGGGCEEEEETTT-EEEEEEECCCCC---CSCEEEECSCS-EEEEEEECSSEECTTC
T ss_pred CCCcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCC-EEEEEEEEeccC---CCeEEEEEEeE-EEEEEEECCCCcCcch
Confidence 4689999999999999999999999999999998 6 999999987654 67889999999 9999999999999999
Q ss_pred e-eEEEeCCEEEEEEeeeCC
Q 047819 81 I-TAHIANSTLTVTIRKKDI 99 (114)
Q Consensus 81 i-~a~~~~GvL~I~ipK~~~ 99 (114)
+ +|+|+||+|+|++||...
T Consensus 98 i~~A~~~~GvL~I~lPK~~~ 117 (123)
T 3aab_A 98 EISGKYENGVLTIRIPIAGT 117 (123)
T ss_dssp CCEEEEETTEEEEEEEGGGE
T ss_pred hCeeEEcCCEEEEEEEcCCC
Confidence 9 999999999999999764
No 7
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.94 E-value=3.2e-26 Score=143.36 Aligned_cols=90 Identities=11% Similarity=0.200 Sum_probs=79.9
Q ss_pred eeeEEeCCCeEEEEEEcCCCCCCCEEEEEeCCcEEEEEEEEecccccCcccEEEeeeeeeEEEEEEECCCCcccCceeEE
Q 047819 5 RIDWDDTPEFHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHCLEVVVGKFSRRFQLLENAMVDRITAH 84 (114)
Q Consensus 5 ~~dv~e~~~~~~i~~~lPG~~~~di~v~~~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i~a~ 84 (114)
.+||+|++++|.|.++|||++++||+|.+.++ .|.|+|++.... ++..|+++ .|.|+|.||.++|.++++|+
T Consensus 3 ~vdi~e~~~~~~v~~dlPG~~~edI~V~v~~~-~L~I~g~~~~~~--~~~~~~~~-----eF~R~~~LP~~vd~~~i~A~ 74 (101)
T 2wj5_A 3 MAQVPTDPGYFSVLLDVKHFSPEEISVKVVGD-HVEVHARHEERP--DEHGFIAR-----EFHRRYRLPPGVDPAAVTSA 74 (101)
T ss_dssp CCCCCCCSSCEEEEEECTTSCGGGEEEEEETT-EEEEEEEEEECS--STTCCEEE-----EEEEEEECCTTBCTTCCEEE
T ss_pred cEEEEEeCCEEEEEEECCCCcHHHeEEEEECC-EEEEEEEEeccc--CCCCEEEE-----EEEEEEECCCCcChhHCEEE
Confidence 57999999999999999999999999999986 999999997643 23345444 39999999999999999999
Q ss_pred E-eCCEEEEEEeeeCCCCC
Q 047819 85 I-ANSTLTVTIRKKDIKKH 102 (114)
Q Consensus 85 ~-~~GvL~I~ipK~~~~~~ 102 (114)
| +||+|+|++||..+..+
T Consensus 75 ~s~nGvL~I~lPK~~~~~~ 93 (101)
T 2wj5_A 75 LSPEGVLSIQATPASAQAS 93 (101)
T ss_dssp ECTTSEEEEEECBCCCCCS
T ss_pred ECCCCEEEEEEECCCcCCC
Confidence 9 89999999999988777
No 8
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.93 E-value=5.9e-25 Score=133.68 Aligned_cols=82 Identities=21% Similarity=0.353 Sum_probs=69.4
Q ss_pred EEeCCCeEEEEEEcCCCCCCCEEEEEeCCcEEEEEEEEecccccCcccEEEeeeeeeEEEEEEECCCCcccCceeEEEe-
Q 047819 8 WDDTPEFHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHCLEVVVGKFSRRFQLLENAMVDRITAHIA- 86 (114)
Q Consensus 8 v~e~~~~~~i~~~lPG~~~~di~v~~~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i~a~~~- 86 (114)
+.|++++|.|.++|||+++++|+|.+.++ .|.|+|++.....+ . ...++.|.|+|.||.++|.++|+|+|.
T Consensus 2 ~~E~~~~~~v~~dlPG~~~edi~V~v~~~-~L~I~g~~~~~~~~-~------~~~~~~F~R~~~LP~~vd~~~i~A~~~~ 73 (85)
T 3q9p_A 2 GSHTADRWRVSLDVNHFAPDELTVKTKDG-VVEITGKHAARQDE-H------GYISRCFTRKYTLPPGVDPTQVSSSLSP 73 (85)
T ss_dssp -CCCCCEEEEEEECTTTCCSEEEEEEETT-EEEEEEEEC--------------CCCEEEEEEEECCTTCCGGGCEEEECT
T ss_pred ccCcCCEEEEEEECCCCChHHEEEEEECC-EEEEEEEEccccCC-C------CEEEEEEEEEEECCCCcChHHcEEEECC
Confidence 46899999999999999999999999986 99999998764322 1 123678999999999999999999998
Q ss_pred CCEEEEEEeee
Q 047819 87 NSTLTVTIRKK 97 (114)
Q Consensus 87 ~GvL~I~ipK~ 97 (114)
||+|+|++||.
T Consensus 74 ~GvL~I~lPK~ 84 (85)
T 3q9p_A 74 EGTLTVEAPMP 84 (85)
T ss_dssp TSEEEEEEECC
T ss_pred CCEEEEEEEcC
Confidence 99999999996
No 9
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.91 E-value=4.8e-24 Score=130.87 Aligned_cols=85 Identities=16% Similarity=0.260 Sum_probs=68.6
Q ss_pred eCCCeEEEEEEcCCCCCCCEEEEEeCCcEEEEEEEEecccccCcccEEEeeeeeeEEEEEEECCCCcccCceeEEE-eCC
Q 047819 10 DTPEFHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHCLEVVVGKFSRRFQLLENAMVDRITAHI-ANS 88 (114)
Q Consensus 10 e~~~~~~i~~~lPG~~~~di~v~~~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i~a~~-~~G 88 (114)
+++++|.|.++|||++++||+|.+.++ .|+|+|++.... .+..|+++ .|.|+|.||.++|.++++|+| +||
T Consensus 3 ~~~~~~~v~~dlPG~~~edi~V~v~~~-~L~I~g~~~~~~--~~~~~~~~-----ef~R~~~LP~~vd~~~i~A~~~~~G 74 (90)
T 2y1y_A 3 MEKDRFSVNLDVKHFSPEELKVKVLGD-VIEVHGKHEERQ--DEHGFISR-----EFHRKYRIPADVDPLTITSSMSSDG 74 (90)
T ss_dssp ---CCEEEEEECTTSCGGGEEEEEETT-EEEEEEEEEEEE--CSSSEEEE-----EEEEEEECCTTBCGGGCEEEECTTS
T ss_pred cCCCEEEEEEECCCCcHHHeEEEEECC-EEEEEEEEeccc--CCCCEEEE-----EEEEEEECCCCcChhHcEEEECCCC
Confidence 678999999999999999999999986 999999987642 33445443 499999999999999999999 899
Q ss_pred EEEEEEeeeCCCCC
Q 047819 89 TLTVTIRKKDIKKH 102 (114)
Q Consensus 89 vL~I~ipK~~~~~~ 102 (114)
+|+|++||..++.+
T Consensus 75 vL~I~~pK~~~~~p 88 (90)
T 2y1y_A 75 VLTVNGPRKQVSGP 88 (90)
T ss_dssp EEEEEECBC-----
T ss_pred EEEEEEEcCCCCCC
Confidence 99999999987765
No 10
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.91 E-value=4.1e-24 Score=145.45 Aligned_cols=96 Identities=18% Similarity=0.283 Sum_probs=72.1
Q ss_pred eeEEeCCCeEEEEEEcCCCCCCCEEEEEeCCcEEEEEEEEecccccCcccEEEeeeeeeEEEEEEECCCCcccCceeEEE
Q 047819 6 IDWDDTPEFHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHCLEVVVGKFSRRFQLLENAMVDRITAHI 85 (114)
Q Consensus 6 ~dv~e~~~~~~i~~~lPG~~~~di~v~~~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i~a~~ 85 (114)
+||.+++++|.|.++|||+++++|+|++.++ .|+|+|++..... +..++++ .|.|+|.||.++|.++|+|+|
T Consensus 66 ~dv~e~~d~~~v~~dlPG~~~edI~V~v~~~-~L~I~g~~~~~~~--~~~~~~r-----eF~R~~~LP~~Vd~~~i~A~~ 137 (175)
T 2klr_A 66 SEMRLEKDRFSVNLDVKHFSPEELKVKVLGD-VIEVHGKHEERQD--EHGFISR-----EFHRKYRIPADVDPLTITSSL 137 (175)
T ss_dssp ---CCCCSEEEEEECCSSCCGGGEEEEEETT-EEEEEEEEEEEEE--TTEEEEE-----EEEEEEECTTTCCTTTCEEEE
T ss_pred eEEEEcCCeEEEEEECCCCChHHEEEEEECC-EEEEEEEEccccc--CCceEEE-----EEEEEEECCCCcChhHeEEEE
Confidence 6999999999999999999999999999986 9999999875432 2344443 499999999999999999999
Q ss_pred -eCCEEEEEEeeeCCCCCCCCceEEEEe
Q 047819 86 -ANSTLTVTIRKKDIKKHHGHSRSIKII 112 (114)
Q Consensus 86 -~~GvL~I~ipK~~~~~~~~~~~~I~I~ 112 (114)
+||+|+|++||..... ..|+|+|+
T Consensus 138 s~dGvL~I~lPK~~~~~---~~r~I~I~ 162 (175)
T 2klr_A 138 SSDGVLTVNGPRKQVSG---PERTIPIT 162 (175)
T ss_dssp CTTSCEEEEEECC---------------
T ss_pred cCCCEEEEEEECCCCCC---CCeEEEEe
Confidence 8999999999986543 24788875
No 11
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.89 E-value=5.7e-23 Score=150.61 Aligned_cols=91 Identities=11% Similarity=0.176 Sum_probs=81.3
Q ss_pred CcceeeEEeCCC----eEEEEEEcCCCCCCCEEEEEeCCcEEEEEEEEecccccCcccEEEeeeeeeEEEEEEECCCCcc
Q 047819 2 IPTRIDWDDTPE----FHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHCLEVVVGKFSRRFQLLENAM 77 (114)
Q Consensus 2 ~~p~~dv~e~~~----~~~i~~~lPG~~~~di~v~~~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd 77 (114)
+.|++|++|+++ +|.|.++|||+++++|+|.++++ .|+|+|++....+ .+ +.+|.|.|+|.||.++|
T Consensus 97 ~~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~~-~L~I~ge~~~~~e--~~------r~~g~F~R~~~LP~~Vd 167 (314)
T 2bol_A 97 LDFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADKN-KLVVRAQKSVACG--DA------AMSESVGRSIPLPPSVD 167 (314)
T ss_dssp TGGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEETT-EEEEEECCBSSTT--CC------CBCCCEEEEEECCTTBC
T ss_pred CCCccceEEcCCCCceEEEEEEECCCCchHHeEEEEECC-EEEEEEEEeccCC--CC------EEEEEEEEEEECCCCcc
Confidence 358999999999 99999999999999999999987 9999999875432 11 56899999999999999
Q ss_pred cCceeEEEe-CCEEEEEEeeeCCCC
Q 047819 78 VDRITAHIA-NSTLTVTIRKKDIKK 101 (114)
Q Consensus 78 ~~~i~a~~~-~GvL~I~ipK~~~~~ 101 (114)
.++|+|+|+ ||+|+|++||..+..
T Consensus 168 ~e~i~A~~~~nGVL~I~lPK~~~~~ 192 (314)
T 2bol_A 168 RNHIQATITTDDVLVIEAPVNEPNY 192 (314)
T ss_dssp GGGCEEEECSSSEEEEEEEBSSCCT
T ss_pred ccccEEEEeCCCEEEEEEeccCccc
Confidence 999999999 999999999987654
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.86 E-value=9.2e-22 Score=144.22 Aligned_cols=88 Identities=15% Similarity=0.149 Sum_probs=69.2
Q ss_pred eeEEeC---CCeEEEEEEc-CCCCCCCEEEEEeCCcEEEEEEEEecccccCcccEEEeeeeeeEEEEEEECCCCcccCce
Q 047819 6 IDWDDT---PEFHVFKADL-SGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHCLEVVVGKFSRRFQLLENAMVDRI 81 (114)
Q Consensus 6 ~dv~e~---~~~~~i~~~l-PG~~~~di~v~~~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i 81 (114)
.++.++ ++.|.+.++| ||++++||+|.+++| .|+|+|+++.+.. .++++|+.+|.|.|+|.||+++|.++|
T Consensus 223 ~~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v~~~-~LtI~ge~~~~~~----~~~~~Er~~g~F~R~~~LP~~vd~~~i 297 (314)
T 2bol_A 223 LEIVTAEDGSKKIHLELKVDPHFAPKDVKVWAKGN-KVYVHGVTGKEEK----TENASHSEHREFYKAFVTPEVVDASKT 297 (314)
T ss_dssp EEEEECTTSCEEEEEEEECCTTCCGGGEEEEESSS-EEEEEEEEC----------------CEEEEEEEECSSEECGGGC
T ss_pred CcEEEecCCCcEEEEEEEcCCCCChHHeEEEEECC-EEEEEEEEeccCC----ceEEEEEeeeEEEEEEECCCCcChHHe
Confidence 455554 4589999999 999999999999986 9999999876432 468889999999999999999999999
Q ss_pred eEEEeCCEEEEEEeeeC
Q 047819 82 TAHIANSTLTVTIRKKD 98 (114)
Q Consensus 82 ~a~~~~GvL~I~ipK~~ 98 (114)
+|+|+||+|+|++||..
T Consensus 298 ~A~~~dGvL~i~~Pk~~ 314 (314)
T 2bol_A 298 QAEIVDGLMVVEAPLFK 314 (314)
T ss_dssp EEEEETTEEEEEEEEEC
T ss_pred EEEEeCCEEEEEEecCC
Confidence 99999999999999963
No 13
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.26 E-value=2.1e-11 Score=74.00 Aligned_cols=82 Identities=17% Similarity=0.284 Sum_probs=71.9
Q ss_pred CcceeeEEeCCCeEEEEEEcCCCCCCCEEEEEeCCcEEEEEEEEecccccCcccEEEeeeeeeEEEEEEECCCCcccCce
Q 047819 2 IPTRIDWDDTPEFHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHCLEVVVGKFSRRFQLLENAMVDRI 81 (114)
Q Consensus 2 ~~p~~dv~e~~~~~~i~~~lPG~~~~di~v~~~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i 81 (114)
+.|+++++++++...|.+.+||+.++++.|.+.++ .|.|++... + ...|...+.|+..++++..
T Consensus 1 ~~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~~-~l~v~~~~~------~---------~~~y~~~~~L~~~I~~~~s 64 (92)
T 2xcm_C 1 AKYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGEQ-ILSVVIEVP------G---------EDAYYLQPRLFGKIIPDKC 64 (92)
T ss_dssp CCSEEEEEEETTEEEEEEECCSCCGGGEEEEECSS-BEEEEECCT------T---------SCCEEECCBBSSCBCGGGC
T ss_pred CCccccEEeCCCEEEEEEEECCCChHHeEEEEECC-EEEEEEEcC------C---------CcEEEEeeEcCCccCchhE
Confidence 56899999999999999999999999999999986 899997531 1 1247778899999999999
Q ss_pred eEEEeCCEEEEEEeeeCC
Q 047819 82 TAHIANSTLTVTIRKKDI 99 (114)
Q Consensus 82 ~a~~~~GvL~I~ipK~~~ 99 (114)
++++.+|.|.|+|+|..+
T Consensus 65 ~~~~~~~~l~i~L~K~~~ 82 (92)
T 2xcm_C 65 KYEVLSTKIEICLAKADI 82 (92)
T ss_dssp EEEECSSCEEEEEEBSSS
T ss_pred EEEEECCEEEEEEEcCCC
Confidence 999999999999999864
No 14
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.25 E-value=4.4e-11 Score=75.49 Aligned_cols=81 Identities=17% Similarity=0.318 Sum_probs=71.1
Q ss_pred cceeeEEeCCCeEEEEEEcCCCCCCCEEEEEeCCcEEEEEEEEecccccCcccEEEeeeeeeEEEEEEECCCCcccCcee
Q 047819 3 PTRIDWDDTPEFHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHCLEVVVGKFSRRFQLLENAMVDRIT 82 (114)
Q Consensus 3 ~p~~dv~e~~~~~~i~~~lPG~~~~di~v~~~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i~ 82 (114)
.|+++|+++++.+.|.+.+||++++++.|.+.++ .|.|++... + ...|...+.|+..|+++..+
T Consensus 9 ~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~~-~l~v~~~~~------~---------~~~y~~~~~L~~~I~~e~s~ 72 (114)
T 1rl1_A 9 KIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEK-ELSALVKLP------S---------GEDYNLKLELLHPIIPEQST 72 (114)
T ss_dssp CCCEEEEECSSEEEEEECCCSCCGGGEEEECSSS-CEEEEEECT------T---------SSEEEEEECBSSCCCGGGEE
T ss_pred CCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEcC-EEEEEEEeC------C---------CcEEEEEeeCCCcCCccccE
Confidence 4678999999999999999999999999999986 899997532 1 12578889999999999999
Q ss_pred EEEeCCEEEEEEeeeCC
Q 047819 83 AHIANSTLTVTIRKKDI 99 (114)
Q Consensus 83 a~~~~GvL~I~ipK~~~ 99 (114)
+++.+|.|.|+|+|..+
T Consensus 73 ~~~~~~~l~i~L~K~~~ 89 (114)
T 1rl1_A 73 FKVLSTKIEIKLKKPEA 89 (114)
T ss_dssp EEECSSSEEEEEECSSC
T ss_pred EEEECCEEEEEEEcCCC
Confidence 99999999999999764
No 15
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=98.85 E-value=9.5e-09 Score=66.54 Aligned_cols=80 Identities=16% Similarity=0.245 Sum_probs=70.2
Q ss_pred CCcceeeEEeCCCeEEEEEEcCCCC--CCCEEEEEeCCcEEEEEEEEecccccCcccEEEeeeeeeEEEEEEECCCCc-c
Q 047819 1 MIPTRIDWDDTPEFHVFKADLSGFH--KHDVKVEIEDGRVLCISGEKKIEKEERTDEGHCLEVVVGKFSRRFQLLENA-M 77 (114)
Q Consensus 1 ~~~p~~dv~e~~~~~~i~~~lPG~~--~~di~v~~~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~v-d 77 (114)
|.-|.+.+.++++..+|.+.+|... .+++++.+++. .+.+.. ..|.-++.||..+ +
T Consensus 1 MiTP~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~~-~F~F~~--------------------~PYyLRL~LP~~V~e 59 (134)
T 2k8q_A 1 GITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQEN-MIIFHL--------------------SPYYLRLRFPHELID 59 (134)
T ss_dssp CCCSEEEEEECSSEEEEEEECCSSCCCSSSCCCEECSS-SEEECS--------------------SSSCEEECCSSCEEC
T ss_pred CcCceEEEEECCCEEEEEEEcCccccCccccEEEEeCC-EEEEec--------------------CCeEEEecCCCeeec
Confidence 7789999999999999999999999 89999999975 888873 3466779999997 8
Q ss_pred cCceeEEE--eCCEEEEEEeeeCCCC
Q 047819 78 VDRITAHI--ANSTLTVTIRKKDIKK 101 (114)
Q Consensus 78 ~~~i~a~~--~~GvL~I~ipK~~~~~ 101 (114)
.+.-+|+| +.|.|+|++||..+.+
T Consensus 60 ~~~~kA~YD~d~~~~~VtLpK~~~Ge 85 (134)
T 2k8q_A 60 DERSTAQYDSKDECINVKVAKLNKNE 85 (134)
T ss_dssp CSSCEEEEETTTTEEEEEEEESSTTC
T ss_pred CCCcceeEeccCCEEEEEEeCCCCCC
Confidence 88899999 4899999999987654
No 16
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=98.78 E-value=2e-07 Score=58.63 Aligned_cols=81 Identities=17% Similarity=0.265 Sum_probs=69.0
Q ss_pred CCcceeeEEeCCCeEEEEEEcCCCC--CCCEEEEEeCCcEEEEEEEEecccccCcccEEEeeeeeeEEEEEEECCCCc-c
Q 047819 1 MIPTRIDWDDTPEFHVFKADLSGFH--KHDVKVEIEDGRVLCISGEKKIEKEERTDEGHCLEVVVGKFSRRFQLLENA-M 77 (114)
Q Consensus 1 ~~~p~~dv~e~~~~~~i~~~lPG~~--~~di~v~~~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~v-d 77 (114)
|.-|.+.+.++++...|.+.+|.+. ..++++.+++. .+.... ..|.-++.||..+ +
T Consensus 15 ~iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~~-~F~F~~--------------------~PYyLRL~lP~~vve 73 (115)
T 3eud_A 15 MITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQEN-MIIFHL--------------------SPYYLRLRFPHELID 73 (115)
T ss_dssp CBCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEETT-EEEEEE--------------------TTEEEEEECSSCEEC
T ss_pred EeCCcEEEEECCCEEEEEEEcCceecccCccEEEEeCC-EEEEec--------------------CCeEEEEecCcceec
Confidence 6789999999999999999999876 88999999975 888873 3477789999886 7
Q ss_pred cCceeEEE--eCCEEEEEEeeeCCCCC
Q 047819 78 VDRITAHI--ANSTLTVTIRKKDIKKH 102 (114)
Q Consensus 78 ~~~i~a~~--~~GvL~I~ipK~~~~~~ 102 (114)
.+.-+|+| ++|.++|++||..+.+-
T Consensus 74 d~~~~A~YD~d~g~~~v~lpK~~~GE~ 100 (115)
T 3eud_A 74 DERSTAQYDSKDECINVKVAKLNKNEY 100 (115)
T ss_dssp STTCEEEEETTTTEEEEEEEESSTTCC
T ss_pred CCCcceEEeCCCcEEEEEEcCCcCCCc
Confidence 77788888 59999999999987553
No 17
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=98.66 E-value=8.8e-08 Score=71.60 Aligned_cols=70 Identities=20% Similarity=0.192 Sum_probs=59.9
Q ss_pred ceeeEEeCCCeEEEEEEcCCCCCCCEEEEEeCCcEEEEEEEEecccccCcccEEEeeeeeeEEEEEEECCCCcccC-cee
Q 047819 4 TRIDWDDTPEFHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHCLEVVVGKFSRRFQLLENAMVD-RIT 82 (114)
Q Consensus 4 p~~dv~e~~~~~~i~~~lPG~~~~di~v~~~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~-~i~ 82 (114)
+++.+... .|.+++.|||+++++|++...++ .|.|+ .|.|+|.+.||...... -..
T Consensus 298 ~~~~i~~~--~~~~~l~lP~~~~~~~~l~~~gd-eL~v~--------------------~g~~rR~i~LP~~L~~~~v~~ 354 (374)
T 3igf_A 298 KPITIDTH--NRQVRLFLPGFDKKQVKLTQYGP-EVTVE--------------------AGDQRRNIFLPPALSGRPITG 354 (374)
T ss_dssp CSEEEETT--TTEEEEECTTCCGGGCEEEEETT-EEEEE--------------------ETTEEEEEECCTTTTTCCEEE
T ss_pred CCEEEEec--cEEEEEECCCCCHHHeEEEEECC-eEEEE--------------------ECCEeecccCCHHHcCCCccc
Confidence 45555444 79999999999999999999987 99999 68899999999887655 578
Q ss_pred EEEeCCEEEEEEee
Q 047819 83 AHIANSTLTVTIRK 96 (114)
Q Consensus 83 a~~~~GvL~I~ipK 96 (114)
|+|+||.|+|++-.
T Consensus 355 A~~~~~~L~i~~~~ 368 (374)
T 3igf_A 355 AKFQNNYLIISFLE 368 (374)
T ss_dssp EEEETTEEEEEECC
T ss_pred cEEECCEEEEEEeh
Confidence 99999999999753
No 18
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.25 E-value=2.4e-05 Score=49.95 Aligned_cols=80 Identities=19% Similarity=0.284 Sum_probs=66.6
Q ss_pred ceeeEEeCCCeEEEEEEcCCC---CCCCEEEEEeCCcEEEEEEEEecccccCcccEEEeeeeeeEEEEEEE-CCCCcccC
Q 047819 4 TRIDWDDTPEFHVFKADLSGF---HKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHCLEVVVGKFSRRFQ-LLENAMVD 79 (114)
Q Consensus 4 p~~dv~e~~~~~~i~~~lPG~---~~~di~v~~~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~-lP~~vd~~ 79 (114)
+.++|+++.+...|.+.+||+ .++++.|.+.+. .|.|+..... + ..|.-.+. |-..|+++
T Consensus 21 ~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~~-~l~v~~~~~~-----~----------~~y~~~~~~L~~~I~~e 84 (127)
T 1x5m_A 21 SNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTER-SFDLLVKNLN-----G----------KSYSMIVNNLLKPISVE 84 (127)
T ss_dssp CSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECSS-EEEEEECSCS-----S----------SCEEEEEECBSSCCCTT
T ss_pred cEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEcC-EEEEEEEcCC-----C----------CcEEEEhHHhcCccCcc
Confidence 578999999999999999999 899999999986 8999863211 1 13566675 89999999
Q ss_pred ceeEEEeCCEEEEEEeeeCC
Q 047819 80 RITAHIANSTLTVTIRKKDI 99 (114)
Q Consensus 80 ~i~a~~~~GvL~I~ipK~~~ 99 (114)
.-...+..+.+.|+|.|..+
T Consensus 85 ~S~~~v~~~kVei~L~K~~~ 104 (127)
T 1x5m_A 85 GSSKKVKTDTVLILCRKKVE 104 (127)
T ss_dssp TCEEEEETTEEEEEEECSSS
T ss_pred cCEEEEeCCEEEEEEEECCC
Confidence 98999999999999999764
No 19
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=98.19 E-value=2.3e-05 Score=49.95 Aligned_cols=81 Identities=16% Similarity=0.205 Sum_probs=66.6
Q ss_pred CcceeeEEeCCCeEEEEEEcCCCCCCCEEEEEeCCcEEEEEEEEecccccCcccEEEeeeeeeEEEEEEECCCCcccCce
Q 047819 2 IPTRIDWDDTPEFHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHCLEVVVGKFSRRFQLLENAMVDRI 81 (114)
Q Consensus 2 ~~p~~dv~e~~~~~~i~~~lPG~~~~di~v~~~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i 81 (114)
.+|.++++++.+...|++.+|+. +++.|.+..+ .|.+++..... ...|.-.+.|-..|+++..
T Consensus 2 ~P~~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~~-~l~~~~~~~~~--------------~~~y~~~l~L~~~I~~e~S 64 (125)
T 1ejf_A 2 QPASAKWYDRRDYVFIEFCVEDS--KDVNVNFEKS-KLTFSCLGGSD--------------NFKHLNEIDLFHCIDPNDS 64 (125)
T ss_dssp BCCCEEEEECSSEEEEEECCTTE--EEEEEEEETT-EEEEEEEETTT--------------TEEEEEEEEBSSCEEEEEE
T ss_pred CCCceeEEeCCCEEEEEEEecCC--CceEEEEECC-EEEEEEEeCCC--------------CceEEEEEEccceeccccC
Confidence 34589999999999999999995 6899999986 89998764111 1236677889999999999
Q ss_pred eEEEeCCEEEEEEeeeCC
Q 047819 82 TAHIANSTLTVTIRKKDI 99 (114)
Q Consensus 82 ~a~~~~GvL~I~ipK~~~ 99 (114)
+.++.+..+.|+|.|..+
T Consensus 65 ~~~v~~~kiei~L~K~~~ 82 (125)
T 1ejf_A 65 KHKRTDRSILCCLRKGES 82 (125)
T ss_dssp EEEECSSCEEEEEEESST
T ss_pred EEEECCCEEEEEEEECCC
Confidence 999988999999999864
No 20
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=98.17 E-value=1.9e-05 Score=51.08 Aligned_cols=88 Identities=11% Similarity=0.105 Sum_probs=69.0
Q ss_pred cceeeEEeC-CCeEEEEEEcCCCCCCCEEEEEeCCcEEEEEEEEeccc-----ccCcccEEEeeeeeeEEEEEEECCCCc
Q 047819 3 PTRIDWDDT-PEFHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEK-----EERTDEGHCLEVVVGKFSRRFQLLENA 76 (114)
Q Consensus 3 ~p~~dv~e~-~~~~~i~~~lPG~~~~di~v~~~~~~~L~I~g~~~~~~-----~~~~~~~~~~e~~~~~f~r~~~lP~~v 76 (114)
.++++|+++ .+...|.+.++++.++++.|.+.++ .|.|+....... ...+. ...|.-.+.|-..|
T Consensus 19 ~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~~-~l~v~~~~~~~~~l~~~~a~g~--------~~~y~~~~~L~~~I 89 (134)
T 1wh0_A 19 FVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFREQ-DFTLIFQTRDGNFLRLHPGCGP--------HTTFRWQVKLRNLI 89 (134)
T ss_dssp CCCEEEEEETTTEEEEEEECCSBCTTSCEEEECSS-EEEEEECBCCHHHHHHSTTCCT--------TSCEEEEEEBSSCE
T ss_pred CCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEECC-EEEEEEEcCCCcccccccccCc--------ceeEEEeccccccC
Confidence 578999999 9999999999999999999999986 899986432110 00000 00466667899999
Q ss_pred ccCceeEEEeCCEEEEEEeeeCC
Q 047819 77 MVDRITAHIANSTLTVTIRKKDI 99 (114)
Q Consensus 77 d~~~i~a~~~~GvL~I~ipK~~~ 99 (114)
+++.-+.++.++.+.|+|.|...
T Consensus 90 ~pe~S~~~v~~~kIeI~L~K~e~ 112 (134)
T 1wh0_A 90 EPEQCTFCFTASRIDICLRKRQS 112 (134)
T ss_dssp EEEEEEEEECSSEEEEEEEESSS
T ss_pred CchhCEEEEeCCEEEEEEEECCC
Confidence 99998999999999999999753
No 21
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=98.08 E-value=6.7e-05 Score=47.64 Aligned_cols=80 Identities=8% Similarity=0.096 Sum_probs=65.0
Q ss_pred cceeeEEeCCCeEEEEEEcC-CC-CCCCEEEEEeCCcEEEEEEEEecccccCcccEEEeeeeeeEEEEEEECCCCcccCc
Q 047819 3 PTRIDWDDTPEFHVFKADLS-GF-HKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHCLEVVVGKFSRRFQLLENAMVDR 80 (114)
Q Consensus 3 ~p~~dv~e~~~~~~i~~~lP-G~-~~~di~v~~~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~ 80 (114)
.|.+.+.++.+...|++.|| |+ +.+++.|.+..+ .|.|+.... .+. .+.-...|...|+++.
T Consensus 19 ~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~~-~l~v~~~~~-----~~~----------~~~~~~~L~~~I~~e~ 82 (124)
T 1wgv_A 19 RENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSS-SIRVAMLEE-----NGE----------RVLMEGKLTHKINTES 82 (124)
T ss_dssp CSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECSS-EEEEEEECS-----SSE----------EEEEEEEBSSCBCTTT
T ss_pred CCcEEEEEcccEEEEEEEcCCCCCchhheEEEEEcC-EEEEEEEcc-----CCC----------ceEEcccccCcCCCcC
Confidence 47899999999999999998 88 899999999986 899986421 011 1223467899999999
Q ss_pred eeEEEeCCE-EEEEEeeeC
Q 047819 81 ITAHIANST-LTVTIRKKD 98 (114)
Q Consensus 81 i~a~~~~Gv-L~I~ipK~~ 98 (114)
-...++++- |.|.|.|..
T Consensus 83 S~w~i~~~k~v~i~L~K~~ 101 (124)
T 1wgv_A 83 SLWSLEPGKCVLVNLSKVG 101 (124)
T ss_dssp CEEEECTTSEEEEEECBSS
T ss_pred CEEEEeCCCEEEEEEEECC
Confidence 999998885 999999975
No 22
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=97.99 E-value=9.1e-05 Score=47.49 Aligned_cols=76 Identities=14% Similarity=0.245 Sum_probs=61.5
Q ss_pred cceeeEEeCCCeEEEEEEcC-CCCCCCEEEEEeCCcEEEEEEEEecccccCcccEEEeeeeeeEEEEEEECCCCcccCce
Q 047819 3 PTRIDWDDTPEFHVFKADLS-GFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHCLEVVVGKFSRRFQLLENAMVDRI 81 (114)
Q Consensus 3 ~p~~dv~e~~~~~~i~~~lP-G~~~~di~v~~~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i 81 (114)
.|.+.+.++.+...|.+.|| |++.+++.|.+..+ .|.|++. +. . .-...|...|+++.-
T Consensus 4 ~~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~~-~l~v~~~--------g~----------~-~~~~~L~~~I~~e~S 63 (131)
T 2o30_A 4 EAKYTWDQELNEINIQFPVTGDADSSAIKIRMVGK-KICVKNQ--------GE----------I-VIDGELLHEVDVSSL 63 (131)
T ss_dssp -CCCEEEEETTEEEEEEECC---CCSCEEEEEETT-EEEEEET--------TE----------E-EEEEEBSSCEEEEEE
T ss_pred CCcEEEEecCCEEEEEEECCCCCCccceEEEEECC-EEEEEEC--------CE----------e-eEccccccccccccC
Confidence 47899999999999999996 89999999999986 8999852 11 1 123568899999999
Q ss_pred eEEEeCCEEEEEEeeeC
Q 047819 82 TAHIANSTLTVTIRKKD 98 (114)
Q Consensus 82 ~a~~~~GvL~I~ipK~~ 98 (114)
...+.++-|.|.|.|..
T Consensus 64 ~w~i~~~kv~i~L~K~~ 80 (131)
T 2o30_A 64 WWVINGDVVDVNVTKKR 80 (131)
T ss_dssp EEEEETTEEEEEEEESS
T ss_pred EEEEeCCEEEEEEEECC
Confidence 99999999999999973
No 23
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=97.92 E-value=8.9e-05 Score=46.95 Aligned_cols=78 Identities=17% Similarity=0.172 Sum_probs=63.2
Q ss_pred cceeeEEeCCCeEEEEEEcC-C--CCCCCEEEEEeCCcEEEEEEEEecccccCcccEEEeeeeeeEEEEEEECCCCcccC
Q 047819 3 PTRIDWDDTPEFHVFKADLS-G--FHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHCLEVVVGKFSRRFQLLENAMVD 79 (114)
Q Consensus 3 ~p~~dv~e~~~~~~i~~~lP-G--~~~~di~v~~~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~ 79 (114)
.|.+.+.++.+...|++.|| | ++.+++.|.+..+ .|.|.... .. +.-...|...|+++
T Consensus 16 ~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~~-~l~v~~kg--------~~----------~~~~g~L~~~I~~d 76 (121)
T 3qor_A 16 LPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRR-HLRVGLKG--------QP----------AIIDGELYNEVKVE 76 (121)
T ss_dssp CSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEETT-EEEEEETT--------SC----------CSEEEEBSSCBCGG
T ss_pred CCCEEEEEccceEEEEEECCCCCcccccceEEEEEcC-EEEEEEcC--------cc----------eEEecccccccccc
Confidence 47799999999999999998 5 7999999999986 88886421 00 11235688899999
Q ss_pred ceeEEEeCC-EEEEEEeeeCC
Q 047819 80 RITAHIANS-TLTVTIRKKDI 99 (114)
Q Consensus 80 ~i~a~~~~G-vL~I~ipK~~~ 99 (114)
.-...+++| .|.|+|.|...
T Consensus 77 eS~w~i~~~~~i~i~L~K~~~ 97 (121)
T 3qor_A 77 ESSWLIADGAVVTVHLEKINK 97 (121)
T ss_dssp GCEEEEETTTEEEEEEEBSSS
T ss_pred ccEEEEcCCCEEEEEEEECCC
Confidence 999999998 99999998754
No 24
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=97.90 E-value=0.00024 Score=46.94 Aligned_cols=77 Identities=12% Similarity=0.228 Sum_probs=64.0
Q ss_pred cceeeEEeCCCeEEEEEEcC-CCCCCCEEEEEeCCcEEEEEEEEecccccCcccEEEeeeeeeEEEEEEECCCCcccCce
Q 047819 3 PTRIDWDDTPEFHVFKADLS-GFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHCLEVVVGKFSRRFQLLENAMVDRI 81 (114)
Q Consensus 3 ~p~~dv~e~~~~~~i~~~lP-G~~~~di~v~~~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i 81 (114)
.|.+.|.++.+...|++.|| |++.+++.|.+..+ .|.|+.. +. .+ -...|...|+++.-
T Consensus 13 ~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~~-~L~v~~k--------g~----------~~-l~g~L~~~I~~eeS 72 (157)
T 2rh0_A 13 TPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSR-HVALAVG--------GR----------EI-LKGKLFDSTIADEG 72 (157)
T ss_dssp CSSEEEEECSSEEEEEEECCTTCCGGGEEEEECSS-EEEEEET--------TE----------EE-EEEEBSSCBCGGGC
T ss_pred CCcEEEEecCCEEEEEEECCCCCcccceEEEEecC-EEEEEEC--------CE----------EE-EeeccccccCcccc
Confidence 47889999999999999998 89999999999986 8999852 10 01 23578999999999
Q ss_pred eEEEeCCE-EEEEEeeeCC
Q 047819 82 TAHIANST-LTVTIRKKDI 99 (114)
Q Consensus 82 ~a~~~~Gv-L~I~ipK~~~ 99 (114)
...++++- |.|+|-|...
T Consensus 73 ~w~i~~~k~v~I~L~K~~~ 91 (157)
T 2rh0_A 73 TWTLEDRKMVRIVLTKTKR 91 (157)
T ss_dssp EEEEECCCEEEEEEEBSSC
T ss_pred EEEEcCCcEEEEEEEEcCC
Confidence 99999885 9999999864
No 25
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=97.89 E-value=0.00015 Score=46.44 Aligned_cols=78 Identities=17% Similarity=0.169 Sum_probs=63.6
Q ss_pred cceeeEEeCCCeEEEEEEcC-C--CCCCCEEEEEeCCcEEEEEEEEecccccCcccEEEeeeeeeEEEEEEECCCCcccC
Q 047819 3 PTRIDWDDTPEFHVFKADLS-G--FHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHCLEVVVGKFSRRFQLLENAMVD 79 (114)
Q Consensus 3 ~p~~dv~e~~~~~~i~~~lP-G--~~~~di~v~~~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~ 79 (114)
.|.+.+.++.+...|.+.|| | ++.+++.|.+..+ .|.|+... .. +.-...|...|+++
T Consensus 7 ~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~~-~l~v~~kg--------~~----------~~~~~~L~~~I~~e 67 (131)
T 1wfi_A 7 GPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRR-HLRVGLKG--------QP----------PVVDGELYNEVKVE 67 (131)
T ss_dssp CCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEETT-EEEEEETT--------SC----------CSBCSCBSSCBCST
T ss_pred CCcEEEEecCCEEEEEEECCCCCcccccceEEEEeCC-EEEEEECC--------ce----------EEEecccccccccc
Confidence 57899999999999999999 6 8999999999986 89998521 00 01124578889999
Q ss_pred ceeEEEeCC-EEEEEEeeeCC
Q 047819 80 RITAHIANS-TLTVTIRKKDI 99 (114)
Q Consensus 80 ~i~a~~~~G-vL~I~ipK~~~ 99 (114)
.-...+++| .|.|+|.|..+
T Consensus 68 ~s~w~i~~~k~v~i~L~K~~~ 88 (131)
T 1wfi_A 68 ESSWLIEDGKVVTVHLEKINK 88 (131)
T ss_dssp TCEEEEETTTEEEEEEEBSSS
T ss_pred cCEEEEcCCCEEEEEEEECCC
Confidence 999999998 89999999864
No 26
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=97.64 E-value=0.00025 Score=46.55 Aligned_cols=78 Identities=15% Similarity=0.309 Sum_probs=63.7
Q ss_pred cceeeEEeCCCeEEEEEEcCCCCCCCEEEEEe-CCcEEEEEEEEecccccCcccEEEeeeeeeEEEEEEECCCCcccCce
Q 047819 3 PTRIDWDDTPEFHVFKADLSGFHKHDVKVEIE-DGRVLCISGEKKIEKEERTDEGHCLEVVVGKFSRRFQLLENAMVDRI 81 (114)
Q Consensus 3 ~p~~dv~e~~~~~~i~~~lPG~~~~di~v~~~-~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i 81 (114)
.|.++++++++...|++.+|++ ++++|.+. ++ .|.+++. .. ++ ..|.-.+.|=..|+++ .
T Consensus 4 ~P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~~-~l~~~~~--~~----~~---------~~y~~~l~L~~~Idpe-S 64 (150)
T 2kmw_A 4 NPEVLWAQRSDKVYLTVALPDA--KDISVKCEPQG-LFSFSAL--GA----QG---------ERFEFSLELYGKIMTE-Y 64 (150)
T ss_dssp CCCEEEEECSSEEEEEECCSSE--EEEEECCCTTE-EEEEEEE--TT----TT---------EEEEEEEEBSSCEEEE-E
T ss_pred CCcEEEEeCCCEEEEEEEeCCC--CceEEEEecCC-EEEEEEE--cC----CC---------ceEEEEeEhhhccccc-c
Confidence 5889999999999999999997 47888888 64 8999986 11 11 2466778899999999 8
Q ss_pred eEEEeCCEEEEEEeeeCC
Q 047819 82 TAHIANSTLTVTIRKKDI 99 (114)
Q Consensus 82 ~a~~~~GvL~I~ipK~~~ 99 (114)
+.+....-+.|+|.|..+
T Consensus 65 ~~~v~~~kIei~L~K~e~ 82 (150)
T 2kmw_A 65 RKNVGLRNIIFSIQKEER 82 (150)
T ss_dssp EEEEESSSEEEEEEECCS
T ss_pred eEEecCCEEEEEEEECCC
Confidence 888888889999999764
No 27
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=97.59 E-value=5e-05 Score=48.99 Aligned_cols=85 Identities=12% Similarity=0.299 Sum_probs=60.0
Q ss_pred cceeeEEeCCCe-------EEEEEEcCCCCCCCEEEEEeCCcEEEEEEEEecccccCcccEEEeeeeeeEEEEEEECCCC
Q 047819 3 PTRIDWDDTPEF-------HVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHCLEVVVGKFSRRFQLLEN 75 (114)
Q Consensus 3 ~p~~dv~e~~~~-------~~i~~~lPG~~~~di~v~~~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~ 75 (114)
.|.++++++.+. ..|++.+|++. ++.|.+..+ .|.+++.......... ...|.-.+.|...
T Consensus 6 ~p~~~W~Q~~~~~~~~k~~V~ltI~~~~~~--~~~V~~~~~-~l~~~~~~~~~~g~~~---------~~~y~~~l~L~~~ 73 (134)
T 2cg9_X 6 NPQVAWAQRSSTTDPERNYVLITVSIADCD--APELTIKPS-YIELKAQSKPHVGDEN---------VHHYQLHIDLYKE 73 (134)
T ss_dssp -----CBCCCEEECCCSSEEEEECCCSSEE--SCCCCBCSS-EEEECCEEC----------------CEEBCEEEECSSC
T ss_pred CCCEEEEeCCCCcCCcCCEEEEEEEecCCC--ceEEEEECC-EEEEEEecccccCCcc---------CceEEEEEEChhh
Confidence 588999999877 99999999974 888888876 8999865421000000 1246677899999
Q ss_pred cccCceeEEEeCCE-EEEEEeeeCC
Q 047819 76 AMVDRITAHIANST-LTVTIRKKDI 99 (114)
Q Consensus 76 vd~~~i~a~~~~Gv-L~I~ipK~~~ 99 (114)
|+++..+.++.++. |.|+|.|..+
T Consensus 74 Idpe~S~~~v~~~~~vei~L~K~~~ 98 (134)
T 2cg9_X 74 IIPEKTMHKVANGQHYFLKLYKKDL 98 (134)
T ss_dssp CCSSSEEEEECCC--CEEEEEECSS
T ss_pred ccccccEEEECCCEEEEEEEEECCC
Confidence 99999999999998 9999999863
No 28
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=89.34 E-value=1.3 Score=25.63 Aligned_cols=33 Identities=9% Similarity=0.205 Sum_probs=28.6
Q ss_pred EEEEEEECCCCcccCceeEEEeCCEEEEEEeeeC
Q 047819 65 KFSRRFQLLENAMVDRITAHIANSTLTVTIRKKD 98 (114)
Q Consensus 65 ~f~r~~~lP~~vd~~~i~a~~~~GvL~I~ipK~~ 98 (114)
.|.-.+.|| +++.+.|+..+++|.|+|.--+..
T Consensus 8 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~ 40 (85)
T 3q9p_A 8 RWRVSLDVN-HFAPDELTVKTKDGVVEITGKHAA 40 (85)
T ss_dssp EEEEEEECT-TTCCSEEEEEEETTEEEEEEEEC-
T ss_pred EEEEEEECC-CCChHHEEEEEECCEEEEEEEEcc
Confidence 578889999 789999999999999999987654
No 29
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=84.73 E-value=2.1 Score=25.74 Aligned_cols=33 Identities=9% Similarity=0.170 Sum_probs=28.4
Q ss_pred eEEEEEEECCCCcccCceeEEEeCCEEEEEEeee
Q 047819 64 GKFSRRFQLLENAMVDRITAHIANSTLTVTIRKK 97 (114)
Q Consensus 64 ~~f~r~~~lP~~vd~~~i~a~~~~GvL~I~ipK~ 97 (114)
..|.-.+.|| +++.+.|+..+++|.|+|.--+.
T Consensus 12 ~~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~ 44 (106)
T 3l1e_A 12 DKFVIFLDVK-HFSPEDLTVKVQEDFVEIHGKHN 44 (106)
T ss_dssp SEEEEEEECT-TSCGGGEEEEEETTEEEEEEEEE
T ss_pred CEEEEEEECC-CCChHHEEEEEECCEEEEEEEEc
Confidence 3577889999 78999999999999999998654
No 30
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=84.46 E-value=2.5 Score=25.07 Aligned_cols=34 Identities=18% Similarity=0.085 Sum_probs=28.0
Q ss_pred eEEEEEEcC-CCCCCCEEEEEeCCcEEEEEEEEecc
Q 047819 14 FHVFKADLS-GFHKHDVKVEIEDGRVLCISGEKKIE 48 (114)
Q Consensus 14 ~~~i~~~lP-G~~~~di~v~~~~~~~L~I~g~~~~~ 48 (114)
.|.-.+.|| +++.+.++-.+.+| .|.|+..+...
T Consensus 62 ~f~R~~~LP~~vd~~~i~A~~~~G-vL~I~lpK~~~ 96 (102)
T 4fei_A 62 RFVRELAFPEPVRPASGVASLAGG-VLTVRFEKLRP 96 (102)
T ss_dssp EEEEEEECSSCBCTTCCEEEEETT-EEEEEEEBSSC
T ss_pred EEEEEEECCCCcchhHcEEEEECC-EEEEEEEccCc
Confidence 456678999 68999999999988 99999776543
No 31
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=83.95 E-value=2.5 Score=24.83 Aligned_cols=32 Identities=19% Similarity=0.128 Sum_probs=27.3
Q ss_pred eEEEEEEcC-CCCCCCEEEEEeCCcEEEEEEEEe
Q 047819 14 FHVFKADLS-GFHKHDVKVEIEDGRVLCISGEKK 46 (114)
Q Consensus 14 ~~~i~~~lP-G~~~~di~v~~~~~~~L~I~g~~~ 46 (114)
.|.-.+.|| +++.+.++-.+.+| .|.|+..+.
T Consensus 65 ~f~r~~~LP~~vd~~~i~A~~~~G-vL~I~~pK~ 97 (100)
T 3gla_A 65 SFHRRFALPDSADADGITAAGRNG-VLEIRIPKR 97 (100)
T ss_dssp EEEEEEECCTTBCTTSCEEEEETT-EEEEEEEBC
T ss_pred EEEEEEECCCCcChHHeEEEEeCC-EEEEEEecC
Confidence 577789999 58999999999987 999997653
No 32
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=83.46 E-value=3 Score=24.20 Aligned_cols=33 Identities=9% Similarity=0.269 Sum_probs=28.4
Q ss_pred EEEEEEECCCCcccCceeEEEeCCEEEEEEeeeC
Q 047819 65 KFSRRFQLLENAMVDRITAHIANSTLTVTIRKKD 98 (114)
Q Consensus 65 ~f~r~~~lP~~vd~~~i~a~~~~GvL~I~ipK~~ 98 (114)
.|.-.+.|| +++.+.|+..+.+|.|+|.--+..
T Consensus 7 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~ 39 (90)
T 2y1y_A 7 RFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHEE 39 (90)
T ss_dssp CEEEEEECT-TSCGGGEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEECC-CCcHHHeEEEEECCEEEEEEEEec
Confidence 477789999 889999999999999999986543
No 33
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=81.48 E-value=4.4 Score=24.03 Aligned_cols=33 Identities=15% Similarity=0.279 Sum_probs=28.6
Q ss_pred EEEEEEECCCCcccCceeEEEeCCEEEEEEeeeC
Q 047819 65 KFSRRFQLLENAMVDRITAHIANSTLTVTIRKKD 98 (114)
Q Consensus 65 ~f~r~~~lP~~vd~~~i~a~~~~GvL~I~ipK~~ 98 (114)
.|.-.+.|| +++.+.|+..+++|.|+|.--+..
T Consensus 12 ~~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~~ 44 (101)
T 2wj5_A 12 YFSVLLDVK-HFSPEEISVKVVGDHVEVHARHEE 44 (101)
T ss_dssp CEEEEEECT-TSCGGGEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEECC-CCcHHHeEEEEECCEEEEEEEEec
Confidence 477788999 899999999999999999987654
No 34
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=78.25 E-value=6.4 Score=24.06 Aligned_cols=35 Identities=14% Similarity=0.197 Sum_probs=29.7
Q ss_pred eEEEEEEECCCCcccCceeEEEeC-CEEEEEEeeeCC
Q 047819 64 GKFSRRFQLLENAMVDRITAHIAN-STLTVTIRKKDI 99 (114)
Q Consensus 64 ~~f~r~~~lP~~vd~~~i~a~~~~-GvL~I~ipK~~~ 99 (114)
..|.-.+.|| +++.+.|+..+.+ |.|+|+.-+...
T Consensus 34 ~~~~v~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~~ 69 (123)
T 3aab_A 34 GYLVVVADLA-GFNKEKIKARVSGQNELIIEAEREIT 69 (123)
T ss_dssp TEEEEEEECC-SCCGGGCEEEEETTTEEEEEEECCCC
T ss_pred CEEEEEEECC-CCCHHHEEEEEeCCCEEEEEEEEecc
Confidence 4577889999 7889999999999 999999876554
No 35
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=77.59 E-value=7.6 Score=24.92 Aligned_cols=35 Identities=11% Similarity=0.114 Sum_probs=29.8
Q ss_pred eEEEEEEECCCCcccCceeEEEeCCEEEEEEeeeCC
Q 047819 64 GKFSRRFQLLENAMVDRITAHIANSTLTVTIRKKDI 99 (114)
Q Consensus 64 ~~f~r~~~lP~~vd~~~i~a~~~~GvL~I~ipK~~~ 99 (114)
..|.-.+.|| +++.+.|+..+++|.|+|+--+...
T Consensus 66 ~~~~v~~dlP-G~~~edi~V~~~~~~L~I~g~~~~~ 100 (161)
T 4eld_A 66 QHIKVIAWLP-GVNKEDIILNAVGDTLEIRAKRSPL 100 (161)
T ss_dssp SEEEEEEECT-TCCGGGEEEEEETTEEEEEEECCCC
T ss_pred CEEEEEEECC-CCChHhEEEEEECCEEEEEEEEccc
Confidence 4577889999 6899999999999999999876653
No 36
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=72.54 E-value=7.5 Score=24.78 Aligned_cols=34 Identities=26% Similarity=0.263 Sum_probs=28.7
Q ss_pred CeEEEEEEcC-CCCCCCEEEEEeCCcEEEEEEEEec
Q 047819 13 EFHVFKADLS-GFHKHDVKVEIEDGRVLCISGEKKI 47 (114)
Q Consensus 13 ~~~~i~~~lP-G~~~~di~v~~~~~~~L~I~g~~~~ 47 (114)
..|.-.+.|| +++.+.++-.+.+| .|.|+..+..
T Consensus 104 g~F~R~~~LP~~vd~~~i~A~~~nG-vL~I~lPK~~ 138 (151)
T 1gme_A 104 GKFVRRFRLLEDAKVEEVKAGLENG-VLTVTVPKAE 138 (151)
T ss_dssp CCEEEEEECSSCCCGGGCEEEEETT-EEEEEEECCC
T ss_pred cEEEEEEECCCCccccceEEEEECC-EEEEEEEccC
Confidence 3577789998 78999999999988 9999987654
No 37
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=69.54 E-value=9.9 Score=25.00 Aligned_cols=34 Identities=9% Similarity=0.262 Sum_probs=29.2
Q ss_pred eEEEEEEECCCCcccCceeEEEeCCEEEEEEeeeC
Q 047819 64 GKFSRRFQLLENAMVDRITAHIANSTLTVTIRKKD 98 (114)
Q Consensus 64 ~~f~r~~~lP~~vd~~~i~a~~~~GvL~I~ipK~~ 98 (114)
..|.-.+.|| +++.+.|+.++.+|.|+|.--+..
T Consensus 73 d~~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~~ 106 (175)
T 2klr_A 73 DRFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHEE 106 (175)
T ss_dssp SEEEEEECCS-SCCGGGEEEEEETTEEEEEEEEEE
T ss_pred CeEEEEEECC-CCChHHEEEEEECCEEEEEEEEcc
Confidence 4588889999 889999999999999999886543
No 38
>2nwt_A UPF0165 protein AF_2212; HOMO dimer protein, GFT structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: b.129.2.2
Probab=62.42 E-value=6.4 Score=22.17 Aligned_cols=15 Identities=20% Similarity=0.111 Sum_probs=12.2
Q ss_pred CceeEEEeCCEEEEE
Q 047819 79 DRITAHIANSTLTVT 93 (114)
Q Consensus 79 ~~i~a~~~~GvL~I~ 93 (114)
..|.|.|+||+|+-.
T Consensus 3 k~IeAiYEnGVfkPL 17 (69)
T 2nwt_A 3 KIIEAVYENGVFKPL 17 (69)
T ss_dssp CCEEEEEETTEEEES
T ss_pred ceEEEEEECCEEeEC
Confidence 458999999998743
No 39
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=56.93 E-value=23 Score=21.13 Aligned_cols=18 Identities=11% Similarity=0.409 Sum_probs=14.5
Q ss_pred CCCEEEEEeCCcEEEEEEE
Q 047819 26 KHDVKVEIEDGRVLCISGE 44 (114)
Q Consensus 26 ~~di~v~~~~~~~L~I~g~ 44 (114)
++.++|+++++ .+.|+|.
T Consensus 20 P~gV~V~i~~~-~VtVKGP 37 (100)
T 2cql_A 20 PENVDITLKGR-TVIVKGP 37 (100)
T ss_dssp CSSCEEEEETT-EEEEEET
T ss_pred CCCCEEEEeCC-EEEEECC
Confidence 46788999875 9999985
No 40
>1n91_A ORF, hypothetical protein; alpha+beta, northeast structural genomics consortium, PSI, P structure initiative, NESG; NMR {Escherichia coli} SCOP: d.206.1.1 PDB: 1yh5_A
Probab=56.93 E-value=30 Score=20.99 Aligned_cols=38 Identities=3% Similarity=-0.047 Sum_probs=29.0
Q ss_pred EEeCCCeEEEEEEc-CCCCCCCEEEEEeCCcEEEEEEEEec
Q 047819 8 WDDTPEFHVFKADL-SGFHKHDVKVEIEDGRVLCISGEKKI 47 (114)
Q Consensus 8 v~e~~~~~~i~~~l-PG~~~~di~v~~~~~~~L~I~g~~~~ 47 (114)
+.+.++.+.|.+.+ ||-+++.|. .+.++ .|.|+-..+.
T Consensus 8 ~~~~~~~v~l~v~V~P~A~r~~I~-g~~~~-~LkV~v~ApP 46 (108)
T 1n91_A 8 VTVNDDGLVLRLYIQPKASRDSIV-GLHGD-EVKVAITAPP 46 (108)
T ss_dssp EEECSSEEEEEEEEECSSSSCEEE-EECSS-CEEEECCCCS
T ss_pred EEECCCeEEEEEEEeeCCCcceee-cccCC-EEEEEEecCC
Confidence 56778899999988 999999874 45665 7888855443
No 41
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=56.46 E-value=38 Score=23.09 Aligned_cols=46 Identities=22% Similarity=0.355 Sum_probs=30.8
Q ss_pred CCCEEEEEeCCcEEEEEEEEecccccCcccEEEeeeeeeEEEEEEECCCCcccCceeEEEeCCEEEEEEeee
Q 047819 26 KHDVKVEIEDGRVLCISGEKKIEKEERTDEGHCLEVVVGKFSRRFQLLENAMVDRITAHIANSTLTVTIRKK 97 (114)
Q Consensus 26 ~~di~v~~~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i~a~~~~GvL~I~ipK~ 97 (114)
++.++|+++++ .+.|+|. .|...+.| +.. +....++|.|.+..+..
T Consensus 39 P~gV~V~i~~~-~VtVKGP------------------kG~L~~~~--~~~-----v~i~~e~~~i~v~~~~~ 84 (212)
T 1nkw_E 39 PSGVTVNAQDG-VFKVKGP------------------KGELTVPY--NTE-----LTVRQDGDQLLVERPSD 84 (212)
T ss_pred CCCcEEEEeCC-EEEEECC------------------CEEEEEEC--CCC-----eEEEEECCEEEEEcCCC
Confidence 46778888864 8999976 35565555 433 45567899888875543
No 42
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=56.38 E-value=29 Score=22.90 Aligned_cols=45 Identities=22% Similarity=0.429 Sum_probs=31.2
Q ss_pred CCCEEEEEeCCcEEEEEEEEecccccCcccEEEeeeeeeEEEEEEECCCCcccCceeEEEeCCEEEEEEee
Q 047819 26 KHDVKVEIEDGRVLCISGEKKIEKEERTDEGHCLEVVVGKFSRRFQLLENAMVDRITAHIANSTLTVTIRK 96 (114)
Q Consensus 26 ~~di~v~~~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i~a~~~~GvL~I~ipK 96 (114)
++.++|+++++ .+.|+|. .|...+.| |.. +....+|+.|.+..+.
T Consensus 11 P~gV~V~i~~~-~VtVkGp------------------kG~L~~~~--~~~-----v~i~~~~~~l~v~~~~ 55 (177)
T 1rl6_A 11 PAGVTVTVNGN-TVTVKGP------------------KGELTRTF--HPD-----MTITVEGNVITVTRPS 55 (177)
T ss_dssp CTTCEEEEETT-EEEEEET------------------TEEEEEEC--CTT-----CEEEEETTEEEEECSC
T ss_pred CCCCEEEEeCC-EEEEECC------------------CeEEEEEc--CCC-----EEEEEeCCEEEEEcCC
Confidence 45788999875 9999985 35566555 443 4556789998887544
No 43
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=52.08 E-value=39 Score=20.75 Aligned_cols=31 Identities=13% Similarity=0.214 Sum_probs=24.0
Q ss_pred eEEEEEEECCCCcccCceeEEEeCCEEEEEE
Q 047819 64 GKFSRRFQLLENAMVDRITAHIANSTLTVTI 94 (114)
Q Consensus 64 ~~f~r~~~lP~~vd~~~i~a~~~~GvL~I~i 94 (114)
....-.|.||.+++.+.+...+...-|.+.+
T Consensus 14 ~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~ 44 (131)
T 2o30_A 14 NEINIQFPVTGDADSSAIKIRMVGKKICVKN 44 (131)
T ss_dssp TEEEEEEECC---CCSCEEEEEETTEEEEEE
T ss_pred CEEEEEEECCCCCCccceEEEEECCEEEEEE
Confidence 4466678999999999999999999999987
No 44
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=51.93 E-value=29 Score=23.10 Aligned_cols=44 Identities=18% Similarity=0.313 Sum_probs=29.2
Q ss_pred CCCEEEEEeCCcEEEEEEEEecccccCcccEEEeeeeeeEEEEEEECCCCcccCceeEEEeCCEEEEEE
Q 047819 26 KHDVKVEIEDGRVLCISGEKKIEKEERTDEGHCLEVVVGKFSRRFQLLENAMVDRITAHIANSTLTVTI 94 (114)
Q Consensus 26 ~~di~v~~~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i~a~~~~GvL~I~i 94 (114)
++.++|++++ +.+.|+|. .|...+.|.-| . ++..++++.|.+..
T Consensus 14 P~gV~v~i~~-~~V~VkGp------------------kG~L~~~~~~~-~-----v~i~~~~~~l~v~~ 57 (184)
T 3j21_F 14 PEGVEVTVEG-YKVKVKGP------------------KGELEREFFWP-G-----IQIFTEDGNVVIYK 57 (184)
T ss_dssp CSSCEEEESS-SEEEEECS------------------SCEEEEECCCT-T-----CEEEEETTEEEEEC
T ss_pred CCCcEEEEeC-CEEEEEcC------------------CeEEEEEecCC-c-----EEEEEeCCEEEEEE
Confidence 3678899976 59999975 35555555322 2 44457889888874
No 45
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=50.76 E-value=34 Score=22.61 Aligned_cols=45 Identities=20% Similarity=0.386 Sum_probs=30.4
Q ss_pred CCEEEEEeCCcEEEEEEEEecccccCcccEEEeeeeeeEEEEEEECCCCcccCceeEEEeCCEEEEEEee
Q 047819 27 HDVKVEIEDGRVLCISGEKKIEKEERTDEGHCLEVVVGKFSRRFQLLENAMVDRITAHIANSTLTVTIRK 96 (114)
Q Consensus 27 ~di~v~~~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i~a~~~~GvL~I~ipK 96 (114)
+.++|+++++ .+.|+|. .|...+.|. +.. +....++|.|.+..+.
T Consensus 10 ~gV~v~i~~~-~vtVkGp------------------kG~L~~~~~-~~~-----v~i~~~~~~i~v~~~~ 54 (178)
T 1vq8_E 10 EDVDAEQDHL-DITVEGD------------------NGSVTRRLW-YPD-----IDVSVDGDTVVIESDE 54 (178)
T ss_dssp TTCEEEEETT-EEEEEET------------------TEEEEEECC-CTT-----CEEEEETTEEEEECSC
T ss_pred CCCEEEEeCC-EEEEECC------------------CeEEEEEEE-CCe-----EEEEEECCEEEEEcCC
Confidence 5788999874 9999985 355665552 333 4455789988887544
No 46
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A*
Probab=46.36 E-value=39 Score=23.67 Aligned_cols=43 Identities=16% Similarity=0.132 Sum_probs=28.6
Q ss_pred CCCCEEEEEeCCcEEEEEEEEecccccCcccE-EEeeeeeeEEEEEEECCCC
Q 047819 25 HKHDVKVEIEDGRVLCISGEKKIEKEERTDEG-HCLEVVVGKFSRRFQLLEN 75 (114)
Q Consensus 25 ~~~di~v~~~~~~~L~I~g~~~~~~~~~~~~~-~~~e~~~~~f~r~~~lP~~ 75 (114)
.++++.+ ++| .|.|++.+.. +..+ ......+|.|+-++.||..
T Consensus 31 ~~~Nv~v--~~G-~L~L~~~k~t-----sa~i~Sk~~~~yG~~Ear~Klp~g 74 (274)
T 2uwa_A 31 GPQHQRV--DQG-SLTIWLDSTS-----GSGFKSINRYRSGYFGANIKLQSG 74 (274)
T ss_dssp CGGGEEE--ETT-EEEEEECSSC-----CEEEEEEEEEEEEEEEEEEECCCS
T ss_pred CCCCEEE--ECC-EEEEEEecCC-----CCEEEECceEeeEEEEEEEEeCCC
Confidence 4566665 677 7999976432 2222 2345668999999999965
No 47
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus}
Probab=45.90 E-value=38 Score=23.17 Aligned_cols=44 Identities=20% Similarity=0.259 Sum_probs=25.9
Q ss_pred EEEeCCcEEEEEEEEecc--cccCcccEEE---eeeeeeEEEEEEECCCC
Q 047819 31 VEIEDGRVLCISGEKKIE--KEERTDEGHC---LEVVVGKFSRRFQLLEN 75 (114)
Q Consensus 31 v~~~~~~~L~I~g~~~~~--~~~~~~~~~~---~e~~~~~f~r~~~lP~~ 75 (114)
+.+++| .|+|++.+... ..-.++.... ....+|.|+-++.||..
T Consensus 49 v~v~~G-~L~i~~~~~~~~~~~~tS~~i~t~~~~~~~yG~~e~r~k~p~g 97 (251)
T 3iln_A 49 ARVGGG-VLIIEARRESYEGREYTSARLVTRGKASWTYGRFEIRARLPSG 97 (251)
T ss_dssp EEEETT-EEEEEEEEEEETTEEEEECEEECTTTCCBSSEEEEEEEECCCS
T ss_pred EEEECC-EEEEEEEeccCCCCCEEEEEEEECCcccccceEEEEEEEccCC
Confidence 455677 99999977631 1101111211 13456899999999954
No 48
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius}
Probab=44.91 E-value=54 Score=23.62 Aligned_cols=48 Identities=17% Similarity=0.216 Sum_probs=29.2
Q ss_pred CCCCEEEEEeCCcEEEEEEEEeccccc-Cc---ccE-------EEe--eeeeeEEEEEEECCCC
Q 047819 25 HKHDVKVEIEDGRVLCISGEKKIEKEE-RT---DEG-------HCL--EVVVGKFSRRFQLLEN 75 (114)
Q Consensus 25 ~~~di~v~~~~~~~L~I~g~~~~~~~~-~~---~~~-------~~~--e~~~~~f~r~~~lP~~ 75 (114)
+++++. +++| .|+|++.+...... .+ ..| ..+ ...+|.|+-++.||..
T Consensus 85 ~~~Nv~--v~dG-~L~I~a~~~~~~~~~~G~~~~~ytsasg~i~Sk~~~~~yG~~E~r~Klp~~ 145 (324)
T 4awd_A 85 KAENVS--VKKG-CLRIINTVLSPTEGLDGKPGDKYRLAGGAVASVKNQAHYGYYETRMKASLT 145 (324)
T ss_dssp CGGGEE--EETT-EEEEECEEEEEEECGGGCBSSSEEEEECEEEESCCCBCSEEEEEEEECCSS
T ss_pred cchhEE--EECC-EEEEEEEeCCCCcccCCcccccEEEEEEEEEECCccccCcEEEEEEECCCC
Confidence 445544 4577 99999988643110 01 122 222 2567899999999965
No 49
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=44.53 E-value=12 Score=22.61 Aligned_cols=16 Identities=31% Similarity=0.472 Sum_probs=14.1
Q ss_pred ceeEEEeCCEEEEEEe
Q 047819 80 RITAHIANSTLTVTIR 95 (114)
Q Consensus 80 ~i~a~~~~GvL~I~ip 95 (114)
.+.+.+.+|||+|+++
T Consensus 29 d~D~e~~~gVLti~f~ 44 (106)
T 1ew4_A 29 DIDCEINGGVLTITFE 44 (106)
T ss_dssp CCEEEEETTEEEEECT
T ss_pred CEeeeccCCEEEEEEC
Confidence 4788899999999986
No 50
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=43.65 E-value=61 Score=20.64 Aligned_cols=32 Identities=6% Similarity=0.141 Sum_probs=27.3
Q ss_pred eeEEEEEEECCCCcccCceeEEEeCCEEEEEE
Q 047819 63 VGKFSRRFQLLENAMVDRITAHIANSTLTVTI 94 (114)
Q Consensus 63 ~~~f~r~~~lP~~vd~~~i~a~~~~GvL~I~i 94 (114)
.....-.|.||..+....+...+...-|.+.+
T Consensus 22 ~~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~ 53 (157)
T 2rh0_A 22 LEEVFIEVQVPPGTRAQDIQCGLQSRHVALAV 53 (157)
T ss_dssp SSEEEEEEECCTTCCGGGEEEEECSSEEEEEE
T ss_pred CCEEEEEEECCCCCcccceEEEEecCEEEEEE
Confidence 45567789999999999999999999999876
No 51
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=42.28 E-value=20 Score=22.38 Aligned_cols=16 Identities=13% Similarity=0.275 Sum_probs=14.0
Q ss_pred eeEEEeCCEEEEEEee
Q 047819 81 ITAHIANSTLTVTIRK 96 (114)
Q Consensus 81 i~a~~~~GvL~I~ipK 96 (114)
+.+.+.+|||+|+++.
T Consensus 49 ~Dve~~~gVLti~f~~ 64 (123)
T 3oeq_A 49 PDVELSHGVMTLEIPA 64 (123)
T ss_dssp CEEEECSSEEEEECTT
T ss_pred eEEEccCCEEEEEECC
Confidence 7888999999999863
No 52
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A
Probab=41.93 E-value=30 Score=23.43 Aligned_cols=44 Identities=11% Similarity=0.192 Sum_probs=26.1
Q ss_pred EEEeC-CcEEEEEEEEecccccCcccEEEe---eeeeeEEEEEEECCCC
Q 047819 31 VEIED-GRVLCISGEKKIEKEERTDEGHCL---EVVVGKFSRRFQLLEN 75 (114)
Q Consensus 31 v~~~~-~~~L~I~g~~~~~~~~~~~~~~~~---e~~~~~f~r~~~lP~~ 75 (114)
+.+.+ | .|.|++.+.....-....+..+ ...+|.|+-++.||..
T Consensus 52 ~~v~~~G-~L~I~~~~~~~~~~~S~~i~S~~~f~~~yG~~E~r~klp~g 99 (245)
T 2hyk_A 52 SALDGNG-NLVITARQEADGGYTSARLTTQNKVQPQYGRVEASIQIPRG 99 (245)
T ss_dssp EEECSSS-CEEEEEEECTTSCEEECEEECTTTCCCCSEEEEEEEECCCS
T ss_pred eEEecCC-EEEEEEEecCCCCEEEEEEEccCcccccCCeEEEEEEcCCC
Confidence 34555 6 8999988765211112222222 2446899999999964
No 53
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=41.56 E-value=84 Score=21.60 Aligned_cols=69 Identities=10% Similarity=0.073 Sum_probs=42.5
Q ss_pred EEEEE---EcCCCCCCCEEEEEe-CCcEEEEEEEEecccccCcccEEEeeeeeeEEEEEEECCCCcccCceeEEEeCCEE
Q 047819 15 HVFKA---DLSGFHKHDVKVEIE-DGRVLCISGEKKIEKEERTDEGHCLEVVVGKFSRRFQLLENAMVDRITAHIANSTL 90 (114)
Q Consensus 15 ~~i~~---~lPG~~~~di~v~~~-~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i~a~~~~GvL 90 (114)
|.+.+ .|||+..+=-.+.+. +++.|.+.... ....+.-... |.+.|++.+...-|.+.|... .+|.+
T Consensus 13 y~~~~~~~~l~g~~~~lSGla~~~~~~~L~aV~d~-------~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~-~~g~~ 83 (255)
T 3qqz_A 13 YHATIDGKEIAGITNNISSLTWSAQSNTLFSTINK-------PAAIVEMTTN-GDLIRTIPLDFVKDLETIEYI-GDNQF 83 (255)
T ss_dssp CEEEEEEEECTTCCSCEEEEEEETTTTEEEEEEET-------TEEEEEEETT-CCEEEEEECSSCSSEEEEEEC-STTEE
T ss_pred eEEEEeceECCCcccCcceeEEeCCCCEEEEEECC-------CCeEEEEeCC-CCEEEEEecCCCCChHHeEEe-CCCEE
Confidence 45555 489998753347776 23467765432 2233333333 788999999877788877653 56655
Q ss_pred EE
Q 047819 91 TV 92 (114)
Q Consensus 91 ~I 92 (114)
.|
T Consensus 84 ~v 85 (255)
T 3qqz_A 84 VI 85 (255)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 54
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=41.55 E-value=65 Score=21.22 Aligned_cols=43 Identities=14% Similarity=0.230 Sum_probs=29.6
Q ss_pred CCCEEEEEeCCcEEEEEEEEecccccCcccEEEeeeeeeEEEEEEECCCCcccCceeEEEeCCEEEEEE
Q 047819 26 KHDVKVEIEDGRVLCISGEKKIEKEERTDEGHCLEVVVGKFSRRFQLLENAMVDRITAHIANSTLTVTI 94 (114)
Q Consensus 26 ~~di~v~~~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i~a~~~~GvL~I~i 94 (114)
++.++|++++ +.+.|+|. .|...+.| +.. +...++++.|.+..
T Consensus 12 P~gV~v~i~~-~~v~VkGp------------------kG~L~~~~--~~~-----v~i~~~~~~l~v~~ 54 (180)
T 3v2d_H 12 PKGVSVEVAP-GRVKVKGP------------------KGELEVPV--SPE-----MRVVVEEGVVRVER 54 (180)
T ss_dssp CTTCEEEEET-TEEEEECS------------------SCEEEEEC--CTT-----SEEEEETTEEEEEC
T ss_pred CCCcEEEEeC-CEEEEEeC------------------CcEEEEEe--CCC-----EEEEEECCEEEEEE
Confidence 4678999986 49999975 35565554 433 44457899888874
No 55
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=40.75 E-value=59 Score=19.63 Aligned_cols=35 Identities=11% Similarity=0.158 Sum_probs=28.7
Q ss_pred eeeeEEEEEEECCCC--cccCceeEEEeCCEEEEEEe
Q 047819 61 VVVGKFSRRFQLLEN--AMVDRITAHIANSTLTVTIR 95 (114)
Q Consensus 61 ~~~~~f~r~~~lP~~--vd~~~i~a~~~~GvL~I~ip 95 (114)
.......-.|.||.. ++...+...+...-|.+.+.
T Consensus 23 Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~k 59 (121)
T 3qor_A 23 QTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLK 59 (121)
T ss_dssp ECSSEEEEEEECCCSSCCCGGGEEEEEETTEEEEEET
T ss_pred EccceEEEEEECCCCCcccccceEEEEEcCEEEEEEc
Confidence 334567778999988 88899999999999998875
No 56
>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A*
Probab=40.64 E-value=50 Score=27.66 Aligned_cols=92 Identities=14% Similarity=0.198 Sum_probs=53.0
Q ss_pred ceeeEEeCCCeEEEEEEc----------CCCCCCCEEEEEeCCcEEEEEEEE-ecc--cccCcccEEEeeeeeeEEEEE-
Q 047819 4 TRIDWDDTPEFHVFKADL----------SGFHKHDVKVEIEDGRVLCISGEK-KIE--KEERTDEGHCLEVVVGKFSRR- 69 (114)
Q Consensus 4 p~~dv~e~~~~~~i~~~l----------PG~~~~di~v~~~~~~~L~I~g~~-~~~--~~~~~~~~~~~e~~~~~f~r~- 69 (114)
..++|++.++.|++.+.+ |||+..-|+|.++.+. .|.. ..+ .-..+..|...-+-.|.|...
T Consensus 809 ~~~~v~~~~~~~~~~~~~~~~~~npw~~~gfs~q~~~iy~~~~~----~g~~~~l~~~~~~~~~~W~~~~~~~G~~~~~~ 884 (1020)
T 1ulv_A 809 TGVDVYDAGDDYAFVATIAGEVTNPWGGQAISHQRVNIYLGKGE----GGATPGLPGTNINLEHAWDSVIVTDGRFDGAG 884 (1020)
T ss_dssp EEEEEEEETTEEEEEEEESSCCCCTTCCSSCSSEEEEEEEECSC----SSCEECSGGGCCEESSCEEEEEEECCSTTCCE
T ss_pred ceeEEEEcCCEEEEEEEecccCCCCCCCCCcceeEEEEEEECCC----CCCcccCCcccCCCCCCccEEEEEeccCCCcc
Confidence 357899999999999988 6899999999998531 0111 001 111122232221212312221
Q ss_pred EECCCCcccC--ceeEEEeCCEEEEEEeeeCC
Q 047819 70 FQLLENAMVD--RITAHIANSTLTVTIRKKDI 99 (114)
Q Consensus 70 ~~lP~~vd~~--~i~a~~~~GvL~I~ipK~~~ 99 (114)
+..|+.-... .+.+.-.++.+++.+||+.-
T Consensus 885 ~~~~~g~~~~~~~v~~~~~~~~i~~~v~~~~l 916 (1020)
T 1ulv_A 885 VYAPDGTRTSAVSLLAVPEARQIVTRVPKAAL 916 (1020)
T ss_dssp EECTTSCEEECCEEEEETTTTEEEEEEEGGGS
T ss_pred eECCCCCcCCCceEEEecCCCEEEEEEcHHHh
Confidence 4456554333 24554568899999999653
No 57
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=40.10 E-value=61 Score=19.58 Aligned_cols=33 Identities=9% Similarity=0.221 Sum_probs=27.7
Q ss_pred eeEEEEEEECCCCc-ccCceeEEEeCCEEEEEEe
Q 047819 63 VGKFSRRFQLLENA-MVDRITAHIANSTLTVTIR 95 (114)
Q Consensus 63 ~~~f~r~~~lP~~v-d~~~i~a~~~~GvL~I~ip 95 (114)
.....-.|.||..+ +.+.+...+...-|.+.+.
T Consensus 28 ~~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~ 61 (124)
T 1wgv_A 28 YTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAML 61 (124)
T ss_dssp TTEEEEEEECCTTCCSGGGEEEEECSSEEEEEEE
T ss_pred ccEEEEEEEcCCCCCchhheEEEEEcCEEEEEEE
Confidence 45567789999888 8999999999999999873
No 58
>2ks0_A Uncharacterized protein; YABP family, structural genomi 2, protein structure initiative, northeast structural genom consortium; NMR {Desulfitobacterium hafniense} PDB: 2kyi_A 3ipf_A
Probab=37.09 E-value=24 Score=19.83 Aligned_cols=22 Identities=41% Similarity=0.699 Sum_probs=18.2
Q ss_pred CCCCCCEEEEEeCCcEEEEEEEE
Q 047819 23 GFHKHDVKVEIEDGRVLCISGEK 45 (114)
Q Consensus 23 G~~~~di~v~~~~~~~L~I~g~~ 45 (114)
-|+.+.|.+...-| .|.|+|+.
T Consensus 17 sFd~e~i~L~T~~G-~L~IkG~~ 38 (71)
T 2ks0_A 17 SFDPKEILLETIQG-VLSIKGEK 38 (71)
T ss_dssp EECSSEEEEEETTE-EEEEEEEC
T ss_pred EECCCEEEEEeCce-EEEEEcCC
Confidence 36788999999887 99999874
No 59
>2hbp_A Cytoskeleton assembly control protein SLA1; SHD1, NPFX(1,2)D, endocytosis, protein binding; NMR {Saccharomyces cerevisiae}
Probab=36.70 E-value=22 Score=19.89 Aligned_cols=33 Identities=18% Similarity=0.328 Sum_probs=27.1
Q ss_pred eEEeCCCeEEEEEEcCCCCCCCEEEEEeCCcEE
Q 047819 7 DWDDTPEFHVFKADLSGFHKHDVKVEIEDGRVL 39 (114)
Q Consensus 7 dv~e~~~~~~i~~~lPG~~~~di~v~~~~~~~L 39 (114)
.|.+..+.|.+++.+=|+....|.+.-.+|..+
T Consensus 7 tWtDrtG~F~VeA~flg~~dgki~LhK~nGv~I 39 (68)
T 2hbp_A 7 LWVDRSGTFKVDAEFIGCAKGKIHLHKANGVKI 39 (68)
T ss_dssp EEEBSSSCCEEEEEEEEEETTEEEEECTTSCEE
T ss_pred EEEcCCCCeEEEEEEEEEeCCEEEEEecCCcEE
Confidence 577888899999999999988888888777333
No 60
>3iz5_F 60S ribosomal protein L9 (L6P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_F
Probab=35.24 E-value=98 Score=20.56 Aligned_cols=45 Identities=24% Similarity=0.462 Sum_probs=29.5
Q ss_pred CCCEEEEEeCCcEEEEEEEEecccccCcccEEEeeeeeeEEEEEEECCCCcccCceeEEE--eCCEEEEEEe
Q 047819 26 KHDVKVEIEDGRVLCISGEKKIEKEERTDEGHCLEVVVGKFSRRFQLLENAMVDRITAHI--ANSTLTVTIR 95 (114)
Q Consensus 26 ~~di~v~~~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i~a~~--~~GvL~I~ip 95 (114)
++.++|++++ +.+.|+|. .|...+.|. +.. +...+ +++.|.+..+
T Consensus 13 P~gV~v~i~~-~~V~VkGP------------------kG~L~~~~~-~~~-----v~i~~~~~~~~l~v~~~ 59 (190)
T 3iz5_F 13 PEGVTVQVAA-KVVTVEGP------------------RGKLTRNFK-HLN-----LDFQLLEGGRKLQVDAW 59 (190)
T ss_dssp CTTCEEEEET-TEEEEEET------------------TEEEEEECC-CTT-----EEEEEETTTTEEEEEES
T ss_pred CCCCEEEEeC-CEEEEECC------------------CceEEEEcc-CCc-----EEEEEEcCCCEEEEEEC
Confidence 4678899986 49999985 355555442 122 34456 7888888754
No 61
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=33.27 E-value=38 Score=20.98 Aligned_cols=27 Identities=11% Similarity=0.101 Sum_probs=23.0
Q ss_pred cCCCCCCCEEEEEeCCcEEEEEEEEecc
Q 047819 21 LSGFHKHDVKVEIEDGRVLCISGEKKIE 48 (114)
Q Consensus 21 lPG~~~~di~v~~~~~~~L~I~g~~~~~ 48 (114)
-|..++-.|.|.+++| .++++|.....
T Consensus 2 ~~~~~p~~i~V~v~~G-~VTLsG~Vp~~ 28 (132)
T 2kgs_A 2 ASALSLSLLSISRSGN-TVTLIGDFPDE 28 (132)
T ss_dssp CCCCCEEEEEEEECSS-EEEEEEEESCH
T ss_pred CCcccceeEEEEEECC-EEEEEEECCCH
Confidence 3677788899999987 99999998874
No 62
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A
Probab=32.44 E-value=56 Score=21.57 Aligned_cols=43 Identities=12% Similarity=0.029 Sum_probs=24.9
Q ss_pred EEEeC-CcEEEEEEEEecccccCcccEEE-eeeeeeEEEEEEECCC
Q 047819 31 VEIED-GRVLCISGEKKIEKEERTDEGHC-LEVVVGKFSRRFQLLE 74 (114)
Q Consensus 31 v~~~~-~~~L~I~g~~~~~~~~~~~~~~~-~e~~~~~f~r~~~lP~ 74 (114)
+.+.+ | .|.|++.+.....-....+.. ....+|.|+-++++|.
T Consensus 39 v~v~~~G-~L~i~~~~~~~~~~~s~~i~S~~~f~yG~~E~r~k~p~ 83 (214)
T 2ayh_A 39 VNFTNDG-KLKLGLTSSAYNKFDCAEYRSTNIYGYGLYEVSMKPAK 83 (214)
T ss_dssp EEECTTS-CEEEEEEEEETTEEEEEEEEESSCBCSEEEEEEEECCC
T ss_pred EEEcCCC-EEEEEEecCCCCceeeEEEEECCeEeeEEEEEEEEcCC
Confidence 45666 6 899998876421000111111 1235789999999985
No 63
>3u5e_H L8, RP24, YL11, 60S ribosomal protein L9-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_F 1s1i_H 3izs_F* 3j16_F 3o5h_I 3o58_I 3u5i_H 4b6a_H 3jyw_H
Probab=30.83 E-value=1.2e+02 Score=20.17 Aligned_cols=46 Identities=20% Similarity=0.421 Sum_probs=30.1
Q ss_pred CCCEEEEEeCCcEEEEEEEEecccccCcccEEEeeeeeeEEEEEEECCCCcccCceeEE-EeCCEEEEEEee
Q 047819 26 KHDVKVEIEDGRVLCISGEKKIEKEERTDEGHCLEVVVGKFSRRFQLLENAMVDRITAH-IANSTLTVTIRK 96 (114)
Q Consensus 26 ~~di~v~~~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i~a~-~~~GvL~I~ipK 96 (114)
|+.++|++++ +.+.|+|. .|...+.| +. . .+... .+++.|.+..+.
T Consensus 13 P~gV~v~i~~-~~V~VkGP------------------kG~L~~~~--~~-~---~v~i~~~~~~~l~v~~~~ 59 (191)
T 3u5e_H 13 PEGVTVSIKS-RIVKVVGP------------------RGTLTKNL--KH-I---DVTFTKVNNQLIKVAVHN 59 (191)
T ss_dssp CTTCEEEEET-TEEEEEET------------------TEEEEEEC--TT-T---CCEEEEEETTEEEEEEEE
T ss_pred CCCcEEEEeC-CEEEEEcC------------------CeEEEEEc--cC-C---cEEEEEecCCeEEEEECC
Confidence 4678899986 49999985 35555544 32 1 23444 468988888654
No 64
>3t3l_A Frataxin, mitochondrial; Fe-S cluster biosynthesis, human mitochondria, oxidoreductas; 1.15A {Homo sapiens} SCOP: d.82.2.1 PDB: 3s4m_A 3t3k_A 3t3j_A 3s5f_A 3t3x_A 3t3t_A 3s5e_A 3s5d_A 1ekg_A 1ly7_A
Probab=30.75 E-value=31 Score=21.57 Aligned_cols=17 Identities=18% Similarity=0.319 Sum_probs=14.4
Q ss_pred CceeEEEeCCEEEEEEe
Q 047819 79 DRITAHIANSTLTVTIR 95 (114)
Q Consensus 79 ~~i~a~~~~GvL~I~ip 95 (114)
..+.+.+.+|||+|+++
T Consensus 40 ~d~D~e~~~gVLti~f~ 56 (129)
T 3t3l_A 40 EDYDVSFGSGVLTVKLG 56 (129)
T ss_dssp TTCEEEEETTEEEEECC
T ss_pred cceeeecCCCEEEEEEc
Confidence 45788899999999985
No 65
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=29.51 E-value=98 Score=18.78 Aligned_cols=32 Identities=9% Similarity=0.140 Sum_probs=26.6
Q ss_pred eEEEEEEECCCC--cccCceeEEEeCCEEEEEEe
Q 047819 64 GKFSRRFQLLEN--AMVDRITAHIANSTLTVTIR 95 (114)
Q Consensus 64 ~~f~r~~~lP~~--vd~~~i~a~~~~GvL~I~ip 95 (114)
....-.|.||.. +..+.+...+...-|.+.+.
T Consensus 17 ~~V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~k 50 (131)
T 1wfi_A 17 AELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLK 50 (131)
T ss_dssp SEEEEEECCCCSSCCCTTSEEEEEETTEEEEEET
T ss_pred CEEEEEEECCCCCcccccceEEEEeCCEEEEEEC
Confidence 445667888977 88999999999999999873
No 66
>1dyp_A Kappa-carrageenase; hydrolase, kappa-carrageenan double helix degradation; HET: MSE; 1.54A {Pseudoalteromonas carrageenovora} SCOP: b.29.1.2
Probab=28.75 E-value=1.4e+02 Score=20.35 Aligned_cols=20 Identities=10% Similarity=0.342 Sum_probs=14.2
Q ss_pred CCCCEEEEEeCCcEEEEEEEEec
Q 047819 25 HKHDVKVEIEDGRVLCISGEKKI 47 (114)
Q Consensus 25 ~~~di~v~~~~~~~L~I~g~~~~ 47 (114)
++++ +.+++| .|+|++.+..
T Consensus 44 ~~~n--v~v~~G-~L~I~a~~~~ 63 (271)
T 1dyp_A 44 KNEN--ATVSKG-KLKLTTKRES 63 (271)
T ss_dssp CGGG--EEEETT-EEEEEEEEEE
T ss_pred CCcc--EEEECC-EEEEEEEecc
Confidence 4555 456777 9999998764
No 67
>3e9t_A Na/Ca exchange protein; CBD1, CALX, membrane, transmembrane, membrane protein; 1.60A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=28.69 E-value=80 Score=18.76 Aligned_cols=34 Identities=15% Similarity=-0.020 Sum_probs=27.5
Q ss_pred CCcceeeEEeCCCeEEEEEEcCCCCCCCEEEEEe
Q 047819 1 MIPTRIDWDDTPEFHVFKADLSGFHKHDVKVEIE 34 (114)
Q Consensus 1 ~~~p~~dv~e~~~~~~i~~~lPG~~~~di~v~~~ 34 (114)
|..+.+.+.|.+..+.+.+..-|-....++|.+.
T Consensus 7 F~~~~y~V~E~~g~~~v~V~R~g~~~~~v~V~y~ 40 (114)
T 3e9t_A 7 FEPGHYTVMENCGEFEVRVVRRGDISTYASVEYE 40 (114)
T ss_dssp ESSSEEEEETTCCEEEEEEEEEECCSSCEEEEEE
T ss_pred EeCCEEEEEcCCeEEEEEEEEECCCCeeEEEEEE
Confidence 4567889999999999999888877777777765
No 68
>2zkr_e 60S ribosomal protein L9; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=28.27 E-value=90 Score=20.76 Aligned_cols=52 Identities=13% Similarity=0.199 Sum_probs=31.8
Q ss_pred EcCCCCCCCEEEEEeCCcEEEEEEEEecccccCcccEEEeeeeeeEEEEEEECCCCcccCceeEEEeCCE---EEEEEee
Q 047819 20 DLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHCLEVVVGKFSRRFQLLENAMVDRITAHIANST---LTVTIRK 96 (114)
Q Consensus 20 ~lPG~~~~di~v~~~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i~a~~~~Gv---L~I~ipK 96 (114)
..|=-=++.++|+++++ .+.|+|. .|...+.| |.. .+....++|. |.+..+.
T Consensus 7 k~pI~IP~gV~V~i~~~-~VtVkGp------------------kG~L~~~~--~~~----~v~i~~~~~~~~~i~v~~~~ 61 (192)
T 2zkr_e 7 NQTVDIPENVDITLKGR-TVIVKGP------------------RGTLRRDF--NHI----NVELSLLGKKKKRLRVDKWW 61 (192)
T ss_dssp ---CCCCTTCEEEEETT-EEEEEET------------------TEEEEEEC--CSS----SCEEEEETTTTCEEEEECSC
T ss_pred cCcEEcCCCCEEEEeCC-EEEEECC------------------CeEEEEEe--CCC----CEEEEEecCceeEEEEEcCC
Confidence 33433467889999875 9999985 35555544 431 3455677887 7776543
No 69
>2dsy_A Hypothetical protein TTHA0281; structural genomics, thermus thermophilus HB8, NPPSFA; HET: NHE; 1.90A {Thermus thermophilus} SCOP: d.304.1.2
Probab=26.40 E-value=16 Score=21.09 Aligned_cols=19 Identities=21% Similarity=0.076 Sum_probs=11.9
Q ss_pred eeEEeCCCeEEEEE-EcCCC
Q 047819 6 IDWDDTPEFHVFKA-DLSGF 24 (114)
Q Consensus 6 ~dv~e~~~~~~i~~-~lPG~ 24 (114)
+.+.++++.|.+.+ +|||+
T Consensus 20 Y~ii~edg~y~~~~Pdlpgc 39 (87)
T 2dsy_A 20 YELIADEEPYYGEIPDLPGV 39 (87)
T ss_dssp EEECSSSSCEEEECTTSTTC
T ss_pred eEEEecCCEEEEEECCCCCe
Confidence 34445666777766 66765
No 70
>3elx_A Ileal bIle acid-binding protein; ileal bIle acid-bindign protein, zebrafish, cholic acid, LIP binding, transport, lipid binding protein; 1.60A {Danio rerio} SCOP: b.60.1.0 PDB: 3elz_A* 3em0_A*
Probab=26.20 E-value=33 Score=21.56 Aligned_cols=31 Identities=6% Similarity=-0.089 Sum_probs=23.3
Q ss_pred CcceeeEEeCCCeEEEEEEcCCCCCCCEEEE
Q 047819 2 IPTRIDWDDTPEFHVFKADLSGFHKHDVKVE 32 (114)
Q Consensus 2 ~~p~~dv~e~~~~~~i~~~lPG~~~~di~v~ 32 (114)
+.|.+.|..++|.|.++..-+|++.-.++..
T Consensus 38 ~kp~~~I~~~Gd~~tikt~s~~~k~~~~~F~ 68 (138)
T 3elx_A 38 FKLVTEIVQNGDDFTWTQYYPNNHVVTNKFI 68 (138)
T ss_dssp CCCEEEEEEETTEEEEEEEEGGGEEEEEEEE
T ss_pred CCceEEEEEcCCEEEEEEEEcCCceEEEEEE
Confidence 5688899999999999988886654444433
No 71
>4ate_A Beta-porphyranase A; hydrolase, AGAR degradation; 1.10A {Zobellia galactanivorans} PDB: 3ilf_A*
Probab=25.91 E-value=1.3e+02 Score=20.83 Aligned_cols=45 Identities=18% Similarity=0.269 Sum_probs=25.3
Q ss_pred CCCEEEEEeCCcEEEEEEEEeccccc----------CcccEEEe-eeeee-EEEEEEECC
Q 047819 26 KHDVKVEIEDGRVLCISGEKKIEKEE----------RTDEGHCL-EVVVG-KFSRRFQLL 73 (114)
Q Consensus 26 ~~di~v~~~~~~~L~I~g~~~~~~~~----------~~~~~~~~-e~~~~-~f~r~~~lP 73 (114)
++++. +.+| .|+|++.+...... .++.+.+. ...+| .|+-++.+|
T Consensus 55 ~~Nv~--v~dG-~L~I~a~~~~~~~~~~~~~~~~~y~s~~i~s~~~~~~G~~~e~r~k~p 111 (266)
T 4ate_A 55 KGNAF--VSDG-FLNLRSTLRKEPSSVQDPFKDIWVDAAAAVSKTKAQPGYYYEARFKAS 111 (266)
T ss_dssp TTSEE--EETT-EEEEECEESSCGGGSSCTTTSCCEEECEEEEEEEECTTCEEEEEEECC
T ss_pred hhhEE--EeCC-cEEEEEEecCCCcccccCCCCccEEEEEEEEeCcCcCCeEEEEEEEcC
Confidence 34544 4677 89999987532110 11222222 23457 788888887
No 72
>3i4i_A 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1.89A {Uncultured murine large bowel bacteriuorganism_taxid}
Probab=25.73 E-value=1.1e+02 Score=20.80 Aligned_cols=41 Identities=17% Similarity=0.280 Sum_probs=24.7
Q ss_pred EEEeCCcEEEEEEEEecccccCcccEEEe------eeeeeEEEEEEECCC
Q 047819 31 VEIEDGRVLCISGEKKIEKEERTDEGHCL------EVVVGKFSRRFQLLE 74 (114)
Q Consensus 31 v~~~~~~~L~I~g~~~~~~~~~~~~~~~~------e~~~~~f~r~~~lP~ 74 (114)
+.+.+| .|.|++.+.... .+..+.+. ...+|.|+-++.+|.
T Consensus 57 v~v~~G-~L~l~~~~~~~~--~~~~~ts~~i~S~~~~~yG~~e~r~K~~~ 103 (234)
T 3i4i_A 57 IELKDG-ILNLSITDDMPS--SSKPYAGAEYRTRDKFGYGLYQVRMKPAK 103 (234)
T ss_dssp EEEETT-EEEEEEEECCTT--CSSSEEEEEEEESSCBCSEEEEEEEECCC
T ss_pred EEEECC-EEEEEEEccCCC--CCCCEEEEEEEEeCceeCEEEEEEEEecC
Confidence 456677 899998775211 11122211 235688999999885
No 73
>2vy0_A Endo-beta-1,3-glucanase; hydrolase, laminarin, endoglucanase, thermostable protein,; 2.16A {Pyrococcus furiosus}
Probab=24.22 E-value=1.2e+02 Score=20.54 Aligned_cols=44 Identities=20% Similarity=0.203 Sum_probs=26.3
Q ss_pred EEEeCCcEEEEEEEEeccccc-------CcccEEEe---eee-eeEEEEEEECCCC
Q 047819 31 VEIEDGRVLCISGEKKIEKEE-------RTDEGHCL---EVV-VGKFSRRFQLLEN 75 (114)
Q Consensus 31 v~~~~~~~L~I~g~~~~~~~~-------~~~~~~~~---e~~-~~~f~r~~~lP~~ 75 (114)
+.+.+| .|+|++.+...... ....+..+ ... +|.|+-++.||..
T Consensus 59 ~~v~~G-~L~I~~~~~~~~~~~~G~~~~~S~~i~S~~~f~~~~yG~~E~r~klp~g 113 (264)
T 2vy0_A 59 TYIVNG-TLVIEARKEIITDPNEGTFLYTSSRLKTEGKVEFSPPVVVEARIKLPKG 113 (264)
T ss_dssp EEEETT-EEEEEEEEEEEEETTTEEEEEEECEEECTTTCEECSSEEEEEEEECCCS
T ss_pred eEecCC-EEEEEEEecccCCCCCCCccEEEEEEEecCcccccCCeEEEEEEEcCCC
Confidence 456777 99999987652210 11112221 234 7889999999964
No 74
>3fso_A Integrin beta-4, GP150; immunoglobulin fold, cell adhesion, alternative splicing, disease mutation, epidermolysis bullosa, glycoprotein, membrane; 1.41A {Homo sapiens} SCOP: b.1.27.0 PDB: 3fq4_A 3h6a_A
Probab=24.20 E-value=1e+02 Score=18.58 Aligned_cols=34 Identities=3% Similarity=-0.088 Sum_probs=27.1
Q ss_pred CCcceeeEEeCCCeEEEEEEcCCCCCCCEEEEEe
Q 047819 1 MIPTRIDWDDTPEFHVFKADLSGFHKHDVKVEIE 34 (114)
Q Consensus 1 ~~~p~~dv~e~~~~~~i~~~lPG~~~~di~v~~~ 34 (114)
|..+.+.+.|....+.|.+..-|-....+.|.+.
T Consensus 10 F~~~~y~V~E~~g~~~v~V~R~gg~~g~v~V~y~ 43 (123)
T 3fso_A 10 FEQPEFSVSRGDQVARIPVIRRVLDGGKSQVSYR 43 (123)
T ss_dssp ESCSEEEEEGGGSEEEEEEEEESCCSSCEEEEEE
T ss_pred EeCCEEEEEcCceEEEEEEEEeCCCCceEEEEEE
Confidence 4567889999988899999887777777777765
No 75
>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} PDB: 3d6e_A
Probab=23.73 E-value=1.4e+02 Score=20.25 Aligned_cols=43 Identities=12% Similarity=0.122 Sum_probs=25.0
Q ss_pred EEEeC-CcEEEEEEEEecccccCcccEEE-eeeeeeEEEEEEECCC
Q 047819 31 VEIED-GRVLCISGEKKIEKEERTDEGHC-LEVVVGKFSRRFQLLE 74 (114)
Q Consensus 31 v~~~~-~~~L~I~g~~~~~~~~~~~~~~~-~e~~~~~f~r~~~lP~ 74 (114)
+.+.+ | .|.|++.+.....-....+.. ....+|.|+-++.+|.
T Consensus 63 v~v~~~G-~L~l~~~~~~~~~~ts~~i~S~~~~~yG~~e~r~K~p~ 107 (238)
T 3o5s_A 63 VSMTSLG-EMRLALTSPAYNKFDCGENRSVQTYGYGLYEVRMKPAK 107 (238)
T ss_dssp EEECTTS-CEEEEEEEEETTEEEEEEEEESSCBCSEEEEEEEECCC
T ss_pred EEEeCCC-EEEEEEEeCCCCceeEEEEEEcCeEccEEEEEEEEeCC
Confidence 56666 5 799998776421100111111 1245789999999884
No 76
>3bbo_I Ribosomal protein L6; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=23.10 E-value=42 Score=23.07 Aligned_cols=45 Identities=16% Similarity=0.229 Sum_probs=29.2
Q ss_pred CCCEEEEEeCCcEEEEEEEEecccccCcccEEEeeeeeeEEEEEEECCCCcccCceeE-EEeCCEEEEEEee
Q 047819 26 KHDVKVEIEDGRVLCISGEKKIEKEERTDEGHCLEVVVGKFSRRFQLLENAMVDRITA-HIANSTLTVTIRK 96 (114)
Q Consensus 26 ~~di~v~~~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i~a-~~~~GvL~I~ipK 96 (114)
++.++|+++++ .+.|+|.+ |...+.| |..+ .. ..+||.|.+..+.
T Consensus 54 P~gV~V~i~~~-~VtVKGPk------------------G~L~~~~--~~~v-----~i~~~e~~~i~v~~~~ 99 (223)
T 3bbo_I 54 PSNVTIALEGQ-DLKVKGPL------------------GELALTY--PREV-----ELTKEESGFLRVKKTV 99 (223)
T ss_dssp STTSCEEESSS-EEEECCSS------------------CCEEEEC--CSSC-----EEEECSSSCEEEECSS
T ss_pred CCCCEEEEeCC-EEEEECCC------------------eEEEEEc--CCCE-----EEEEecCCEEEEEcCC
Confidence 46778888764 89998753 4455444 5444 33 4688888877554
No 77
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=22.97 E-value=1.1e+02 Score=18.70 Aligned_cols=34 Identities=15% Similarity=-0.020 Sum_probs=27.9
Q ss_pred CCcceeeEEeCCCeEEEEEEcCCCCCCCEEEEEe
Q 047819 1 MIPTRIDWDDTPEFHVFKADLSGFHKHDVKVEIE 34 (114)
Q Consensus 1 ~~~p~~dv~e~~~~~~i~~~lPG~~~~di~v~~~ 34 (114)
|..+.+.+.|....+.+.+..-|-....+.|.+.
T Consensus 9 F~~~~y~V~E~~g~~~v~V~R~g~~~~~v~V~y~ 42 (137)
T 3ead_A 9 FEPGHYTVMENCGEFEVRVVRRGDISTYASVEYE 42 (137)
T ss_dssp ESSCEEEEEGGGCEEEEEEEEESCCSSCEEEEEE
T ss_pred EcCCEEEEECCCeEEEEEEEEECCCCceEEEEEE
Confidence 4567888999889999999998877777777765
No 78
>2k0r_A Thiol:disulfide interchange protein DSBD; immunoglobulin, mutant, N-terminal domain, disulfide bond reductase; NMR {Neisseria meningitidis serogroup B} PDB: 2k9f_B
Probab=22.87 E-value=1.4e+02 Score=18.31 Aligned_cols=32 Identities=3% Similarity=0.013 Sum_probs=22.5
Q ss_pred eeeEEeCCCeEEEEEEc-CCC--CCCCEEEEEeCC
Q 047819 5 RIDWDDTPEFHVFKADL-SGF--HKHDVKVEIEDG 36 (114)
Q Consensus 5 ~~dv~e~~~~~~i~~~l-PG~--~~~di~v~~~~~ 36 (114)
.++....++...|+.++ ||+ -++.|++...++
T Consensus 16 ~~~~~~~~~~l~l~w~Ia~GyYLYrd~~~~~~~~~ 50 (128)
T 2k0r_A 16 VPELAVADDGVNVRFRIADGYYMYQAKIVGKTNPA 50 (128)
T ss_dssp EEEEEECSSEEEEEEEECTTEEEETTTCEEEEESS
T ss_pred eeeeEecCCEEEEEEEECCCcEEEccEEEEEeCCC
Confidence 34566666778888888 576 777888877654
No 79
>1vd2_A Protein kinase C, IOTA type; PB1 domain, OPCA motif, APKC, ZIP/P62, MEK5, molecular recognition, transferase; NMR {Homo sapiens} SCOP: d.15.2.2 PDB: 1wmh_A
Probab=22.74 E-value=54 Score=19.10 Aligned_cols=17 Identities=12% Similarity=0.194 Sum_probs=14.6
Q ss_pred ceeEEEeCCEEEEEEee
Q 047819 80 RITAHIANSTLTVTIRK 96 (114)
Q Consensus 80 ~i~a~~~~GvL~I~ipK 96 (114)
+++|.|.+.++.+++|.
T Consensus 8 kvK~~~~gdi~~~~v~~ 24 (89)
T 1vd2_A 8 RVKAYYRGDIMITHFEP 24 (89)
T ss_dssp EEEEESSSCEEEEEECT
T ss_pred EEEEEeCCeEEEEECCC
Confidence 58889999999999875
No 80
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=22.52 E-value=83 Score=16.38 Aligned_cols=22 Identities=14% Similarity=0.278 Sum_probs=17.5
Q ss_pred CCCCEEEEEeCCcEEEEEEEEec
Q 047819 25 HKHDVKVEIEDGRVLCISGEKKI 47 (114)
Q Consensus 25 ~~~di~v~~~~~~~L~I~g~~~~ 47 (114)
.-+||.|+.+++ .+.+.|+...
T Consensus 31 gyndinvtwdgd-tvtvegqleg 52 (62)
T 2gjh_A 31 GYNDINVTWDGD-TVTVEGQLEG 52 (62)
T ss_dssp TCCSCEEEECSS-CEEEEEECCC
T ss_pred CcccceeEEcCC-EEEEEeEEcC
Confidence 347899999977 8999988643
No 81
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=22.12 E-value=1.4e+02 Score=18.22 Aligned_cols=29 Identities=24% Similarity=0.375 Sum_probs=19.0
Q ss_pred ceeEEE---eCCEEEEEEeeeCCCCCCCCceEEEEe
Q 047819 80 RITAHI---ANSTLTVTIRKKDIKKHHGHSRSIKII 112 (114)
Q Consensus 80 ~i~a~~---~~GvL~I~ipK~~~~~~~~~~~~I~I~ 112 (114)
+|+..| .||+|.|+.--.... ....|.|+
T Consensus 99 ~IeVtf~iD~nGiL~V~a~d~~tg----~~~~i~i~ 130 (135)
T 1q5l_A 99 QIEVTFDIDADGILHVSAKDKNSG----KEQKITIK 130 (135)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTC----CEEEEEEE
T ss_pred EEEEEEEECCCCEEEEEEEECCCC----CEEEEEEe
Confidence 566666 599999997544333 33677665
No 82
>1nvp_C Transcription initiation factor IIA beta chain; transcription regulation, DNA, complex, transcription/DNA complex; 2.10A {Homo sapiens} SCOP: b.56.1.1
Probab=22.11 E-value=37 Score=19.34 Aligned_cols=15 Identities=7% Similarity=0.328 Sum_probs=12.5
Q ss_pred cCceeEEEeCCEEEE
Q 047819 78 VDRITAHIANSTLTV 92 (114)
Q Consensus 78 ~~~i~a~~~~GvL~I 92 (114)
.++=++.|++|+|.|
T Consensus 46 KnkWKc~LKdGim~i 60 (76)
T 1nvp_C 46 KNKWKFHLKDGIMNL 60 (76)
T ss_dssp TTEEEEEEEEEEEEE
T ss_pred CceEEEEEeccEEEE
Confidence 456788999999988
No 83
>3rq0_A Glycosyl hydrolases family protein 16; structural genomics, PSI-biology; HET: PG4 211; 2.02A {Mycobacterium smegmatis}
Probab=22.04 E-value=62 Score=22.69 Aligned_cols=36 Identities=22% Similarity=0.207 Sum_probs=21.6
Q ss_pred EEEe-CCcEEEEEEEEecccccCcccEEEe------eeeeeE-EEEEEECC
Q 047819 31 VEIE-DGRVLCISGEKKIEKEERTDEGHCL------EVVVGK-FSRRFQLL 73 (114)
Q Consensus 31 v~~~-~~~~L~I~g~~~~~~~~~~~~~~~~------e~~~~~-f~r~~~lP 73 (114)
+.++ +| .|+|++.+.. ..+.+. ...+|. |+-++.+|
T Consensus 91 v~v~g~G-~L~I~a~~~~------~~~~Sgri~sk~~~~yG~~~E~r~Klp 134 (269)
T 3rq0_A 91 VFLDGKS-NLVIRAAKDG------DTYYSAKLASVWEGGAGHTWEARIKFN 134 (269)
T ss_dssp EEECSSS-CEEEEEEEET------TEEEEEEEEESSCBCSSEEEEEEEEEE
T ss_pred EEEeCCC-EEEEEEEcCC------CCEEEEEEEEeeeccCCeEEEEEEECC
Confidence 5555 56 8999998752 122211 223566 77777777
No 84
>1eal_A Gastrotropin, ileal lipid binding protein; intracellular lipid binding protein, bIle acid binding, ileal epithelium, fatty acid binding protein; NMR {Sus scrofa} SCOP: b.60.1.2 PDB: 1eio_A* 1o1u_A 1o1v_A*
Probab=21.83 E-value=1.1e+02 Score=18.69 Aligned_cols=25 Identities=8% Similarity=0.110 Sum_probs=19.6
Q ss_pred CcceeeEEeCCCeEEEEEEcCCCCC
Q 047819 2 IPTRIDWDDTPEFHVFKADLSGFHK 26 (114)
Q Consensus 2 ~~p~~dv~e~~~~~~i~~~lPG~~~ 26 (114)
+.|.+.+..++|.|.++....+++.
T Consensus 34 ~kp~~ei~~~Gd~~~ikt~~s~~k~ 58 (127)
T 1eal_A 34 LKIISEVKQDGQNFTWSQQYPGGHS 58 (127)
T ss_dssp CCEEEEEEESSSEEEEEEECSSSCE
T ss_pred CCcEEEEEEcCCEEEEEEEECCCce
Confidence 5788999999999999988344443
No 85
>4atf_A Beta-agarase B; hydrolase, polysaccharidase, agarolytic enzyme; HET: AAL GAL; 1.90A {Zobellia galactanivorans}
Probab=21.83 E-value=96 Score=22.20 Aligned_cols=47 Identities=17% Similarity=0.136 Sum_probs=25.9
Q ss_pred CCCCEEEEEeCCcEEEEEEEEecccc-cCcccEEEe-eeeee-EEEEEEECCC
Q 047819 25 HKHDVKVEIEDGRVLCISGEKKIEKE-ERTDEGHCL-EVVVG-KFSRRFQLLE 74 (114)
Q Consensus 25 ~~~di~v~~~~~~~L~I~g~~~~~~~-~~~~~~~~~-e~~~~-~f~r~~~lP~ 74 (114)
.++++.| ++| .|+|++.+..... -..+.+.+. ...+| .|+-++.||.
T Consensus 72 ~~~Nv~v--~dG-~L~I~a~~~~~~~~~tSg~i~Sk~~~~ygg~~EaR~Kl~~ 121 (308)
T 4atf_A 72 KRDRSYV--ADG-ELKMWATRKPGSDKINMGCITSKTRVVYPVYIEARAKVMN 121 (308)
T ss_dssp CGGGEEE--ETT-EEEEECEECTTSSCEEECEEEESSCBCSSEEEEEEEECCS
T ss_pred cccceEE--ECC-EEEEEEEecCCCCCEEEEEEEECceeecCeEEEEEEECCC
Confidence 4455444 577 9999998753211 011111111 12345 8899999984
No 86
>3kwr_A Putative RNA-binding protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative, PS binding protein; HET: GOL; 1.45A {Lactobacillus plantarum}
Probab=21.38 E-value=32 Score=20.38 Aligned_cols=17 Identities=12% Similarity=0.261 Sum_probs=10.3
Q ss_pred EEeCCCeEEEEE-EcCCC
Q 047819 8 WDDTPEFHVFKA-DLSGF 24 (114)
Q Consensus 8 v~e~~~~~~i~~-~lPG~ 24 (114)
++.+++.|.+.+ +|||+
T Consensus 15 i~~dd~gy~v~fPDlPGc 32 (97)
T 3kwr_A 15 FRDEGTYWDVRFPDVPAA 32 (97)
T ss_dssp EEECSSSEEEECTTCGGG
T ss_pred EEEcCCEEEEEeCCCCCc
Confidence 444556677666 66664
No 87
>1o4z_A Beta-agarase B; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: EPE; 2.30A {Zobellia galactanivorans} SCOP: b.29.1.2
Probab=21.26 E-value=1.1e+02 Score=22.09 Aligned_cols=47 Identities=15% Similarity=0.132 Sum_probs=27.4
Q ss_pred CCCEEEEEeCCcEEEEEEEEecccc-cCcccEEEe-eeeee-EEEEEEECCCC
Q 047819 26 KHDVKVEIEDGRVLCISGEKKIEKE-ERTDEGHCL-EVVVG-KFSRRFQLLEN 75 (114)
Q Consensus 26 ~~di~v~~~~~~~L~I~g~~~~~~~-~~~~~~~~~-e~~~~-~f~r~~~lP~~ 75 (114)
++++ .+++| .|+|++.+..... -.++.+... ...+| .|+-++.||..
T Consensus 104 ~~Nv--~v~dG-~L~I~a~~~~g~~~~tSg~i~Sk~~f~YGr~vEaRaKlp~g 153 (346)
T 1o4z_A 104 RDRS--YVADG-ELKMWATRKPGSDKINMGCITSKTRVVYPVYIEARAKVMNS 153 (346)
T ss_dssp GGGE--EEETT-EEEEECEECTTSSCEEECEEEESSCBCSSEEEEEEEECCSS
T ss_pred ccCE--EEECC-EEEEEEEecCCCCcEEeeEEEeCccEeCCeEEEEEEEecCC
Confidence 4454 45577 9999998764210 011122211 24578 59999999964
No 88
>3jx8_A Putative lipoprotein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.16A {Parabacteroides distasonis atcc 8503}
Probab=20.79 E-value=1.1e+02 Score=20.58 Aligned_cols=38 Identities=13% Similarity=0.195 Sum_probs=26.1
Q ss_pred eEEeCCCeEEEEEEcCCCCCCCEEEEEeCCcEEEEEEEE
Q 047819 7 DWDDTPEFHVFKADLSGFHKHDVKVEIEDGRVLCISGEK 45 (114)
Q Consensus 7 dv~e~~~~~~i~~~lPG~~~~di~v~~~~~~~L~I~g~~ 45 (114)
.+...++.+.+++.-+.--.+.|.++++++ .|.|+-+.
T Consensus 35 ~l~qgd~~~~V~i~~~~nl~~~i~~~v~~g-~L~I~~~~ 72 (250)
T 3jx8_A 35 EYEQSDKAPYLSVTIDENLFDYLVTEVEGG-TLKIYPKS 72 (250)
T ss_dssp EEEECSSCCEEEEEEEGGGGGGEEEEEETT-EEEEEECB
T ss_pred EEEECCCCceEEEEECccccceEEEEEECC-EEEEEEcC
Confidence 344443466677776655567899999986 99998653
Done!