Query 047833
Match_columns 473
No_of_seqs 130 out of 1478
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 05:37:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047833.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047833hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 3.2E-66 1.1E-70 511.6 39.7 433 4-466 12-453 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 1.3E-59 4.4E-64 472.4 44.5 439 1-468 1-470 (480)
3 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 2E-60 6.8E-65 480.0 37.7 442 5-468 8-480 (482)
4 2c1x_A UDP-glucose flavonoid 3 100.0 7.2E-59 2.4E-63 464.0 41.8 435 4-467 6-452 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 1.2E-57 4.3E-62 456.3 40.5 429 5-467 9-463 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 7.3E-45 2.5E-49 362.2 37.1 400 4-466 11-421 (424)
7 4amg_A Snogd; transferase, pol 100.0 1.1E-44 3.8E-49 358.2 29.9 365 4-463 21-397 (400)
8 1iir_A Glycosyltransferase GTF 100.0 6.3E-43 2.2E-47 347.0 31.0 383 6-466 1-400 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 3.4E-42 1.2E-46 342.0 26.1 386 6-465 1-400 (416)
10 3h4t_A Glycosyltransferase GTF 100.0 4.3E-42 1.5E-46 339.5 26.5 376 6-469 1-385 (404)
11 3rsc_A CALG2; TDP, enediyne, s 100.0 3.9E-41 1.3E-45 334.4 33.1 394 3-467 18-414 (415)
12 3ia7_A CALG4; glycosysltransfe 100.0 4E-40 1.4E-44 325.6 36.7 394 5-468 4-400 (402)
13 2yjn_A ERYCIII, glycosyltransf 100.0 1.1E-40 3.7E-45 333.6 28.9 385 4-470 19-439 (441)
14 2p6p_A Glycosyl transferase; X 100.0 2.5E-38 8.6E-43 310.9 31.3 367 6-469 1-382 (384)
15 2iyf_A OLED, oleandomycin glyc 100.0 4E-38 1.4E-42 314.1 31.3 388 5-466 7-399 (430)
16 4fzr_A SSFS6; structural genom 100.0 5.4E-37 1.9E-41 302.8 24.3 365 3-461 13-395 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 6.6E-36 2.2E-40 295.0 30.3 362 4-465 19-396 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 1.8E-34 6.3E-39 284.0 30.8 370 5-467 1-389 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 2.1E-32 7.2E-37 271.2 34.1 371 3-467 18-409 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 1.2E-30 4E-35 253.5 23.4 319 6-435 3-337 (365)
21 2o6l_A UDP-glucuronosyltransfe 100.0 6E-28 2.1E-32 208.6 16.6 164 263-441 5-169 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.9 1.1E-20 3.6E-25 183.7 26.0 343 1-469 1-358 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.6 4E-14 1.4E-18 130.4 22.1 116 278-401 156-274 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.6 2E-15 6.9E-20 133.3 9.3 132 276-419 25-196 (224)
25 1v4v_A UDP-N-acetylglucosamine 99.4 6.8E-12 2.3E-16 122.0 19.8 158 279-465 198-365 (376)
26 3c48_A Predicted glycosyltrans 99.4 2.1E-10 7.1E-15 113.8 26.7 355 3-440 18-409 (438)
27 3fro_A GLGA glycogen synthase; 99.3 6.1E-09 2.1E-13 103.0 30.6 160 281-468 252-430 (439)
28 3dzc_A UDP-N-acetylglucosamine 99.3 8.2E-11 2.8E-15 114.9 16.4 130 278-423 229-368 (396)
29 3okp_A GDP-mannose-dependent a 99.3 6.2E-09 2.1E-13 101.4 29.1 351 1-469 1-380 (394)
30 3ot5_A UDP-N-acetylglucosamine 99.2 1.3E-10 4.5E-15 113.7 16.2 161 278-467 223-394 (403)
31 2gek_A Phosphatidylinositol ma 99.2 5E-09 1.7E-13 102.6 26.5 324 4-437 19-364 (406)
32 1vgv_A UDP-N-acetylglucosamine 99.2 2.2E-10 7.5E-15 111.5 16.5 130 278-423 204-343 (384)
33 2r60_A Glycosyl transferase, g 99.1 9.3E-09 3.2E-13 103.8 24.0 97 331-439 334-441 (499)
34 2jjm_A Glycosyl transferase, g 99.1 3.8E-08 1.3E-12 96.0 26.2 331 5-437 15-365 (394)
35 4hwg_A UDP-N-acetylglucosamine 99.1 2.5E-09 8.7E-14 103.6 16.7 352 4-468 8-377 (385)
36 3beo_A UDP-N-acetylglucosamine 99.0 1.4E-08 4.8E-13 98.3 19.4 159 278-465 204-373 (375)
37 2iw1_A Lipopolysaccharide core 99.0 1.2E-07 4.2E-12 91.5 25.8 148 279-440 195-355 (374)
38 2x6q_A Trehalose-synthase TRET 98.9 6.3E-07 2.2E-11 87.9 26.9 161 281-467 232-413 (416)
39 2iuy_A Avigt4, glycosyltransfe 98.9 2.5E-08 8.4E-13 95.3 15.9 122 282-421 164-307 (342)
40 1rzu_A Glycogen synthase 1; gl 98.5 4.3E-05 1.5E-09 76.4 24.2 159 281-467 292-474 (485)
41 2f9f_A First mannosyl transfer 98.4 1.7E-06 5.9E-11 74.0 11.9 128 281-423 24-163 (177)
42 3s28_A Sucrose synthase 1; gly 98.4 1.4E-05 4.7E-10 84.1 20.7 96 330-437 638-749 (816)
43 2vsy_A XCC0866; transferase, g 98.4 0.0003 1E-08 71.8 30.4 118 332-467 434-558 (568)
44 2qzs_A Glycogen synthase; glyc 98.4 2.9E-05 1E-09 77.6 22.3 162 281-469 293-477 (485)
45 2xci_A KDO-transferase, 3-deox 98.4 0.00012 4.1E-09 70.5 24.2 101 333-443 261-366 (374)
46 3oy2_A Glycosyltransferase B73 98.3 0.00043 1.5E-08 67.4 26.7 163 280-467 184-389 (413)
47 2hy7_A Glucuronosyltransferase 98.1 0.0013 4.6E-08 63.9 25.3 114 281-423 223-353 (406)
48 3qhp_A Type 1 capsular polysac 97.7 0.00022 7.7E-09 59.7 9.8 142 280-440 2-158 (166)
49 2bfw_A GLGA glycogen synthase; 97.6 0.00081 2.8E-08 58.1 12.7 142 282-438 38-197 (200)
50 3tov_A Glycosyl transferase fa 97.3 0.013 4.3E-07 55.6 17.5 106 4-143 7-115 (349)
51 1psw_A ADP-heptose LPS heptosy 97.2 0.015 5.1E-07 55.0 17.5 46 6-51 1-47 (348)
52 3q3e_A HMW1C-like glycosyltran 97.2 0.0044 1.5E-07 62.4 13.5 146 280-433 441-599 (631)
53 4gyw_A UDP-N-acetylglucosamine 97.2 0.0063 2.2E-07 63.6 15.4 147 278-432 521-678 (723)
54 3rhz_A GTF3, nucleotide sugar 97.1 0.0016 5.5E-08 61.5 9.4 146 281-464 179-336 (339)
55 2gt1_A Lipopolysaccharide hept 96.2 0.18 6E-06 47.0 16.1 135 278-423 177-323 (326)
56 2x0d_A WSAF; GT4 family, trans 95.0 0.1 3.6E-06 50.5 9.9 80 331-423 294-380 (413)
57 2wqk_A 5'-nucleotidase SURE; S 91.3 0.53 1.8E-05 41.8 7.4 40 5-48 1-41 (251)
58 3vue_A GBSS-I, granule-bound s 91.0 1.7 5.7E-05 43.5 11.8 133 281-421 328-476 (536)
59 2phj_A 5'-nucleotidase SURE; S 90.7 0.74 2.5E-05 40.6 7.7 42 5-49 1-42 (251)
60 3t5t_A Putative glycosyltransf 85.8 8.7 0.0003 37.7 12.5 112 333-468 353-473 (496)
61 3auf_A Glycinamide ribonucleot 85.1 5.2 0.00018 34.9 9.5 106 3-147 20-132 (229)
62 3vue_A GBSS-I, granule-bound s 83.5 0.68 2.3E-05 46.4 3.6 39 3-44 7-53 (536)
63 3av3_A Phosphoribosylglycinami 82.7 7.5 0.00026 33.4 9.4 105 4-147 2-113 (212)
64 2ywr_A Phosphoribosylglycinami 81.8 4.6 0.00016 34.8 7.8 104 5-147 1-111 (216)
65 3iqw_A Tail-anchored protein t 80.9 6.4 0.00022 36.5 8.9 41 4-45 14-55 (334)
66 3rfo_A Methionyl-tRNA formyltr 80.1 11 0.00037 34.6 10.1 37 3-45 2-38 (317)
67 3vot_A L-amino acid ligase, BL 80.1 6.4 0.00022 37.8 9.1 38 1-44 1-38 (425)
68 3zqu_A Probable aromatic acid 78.5 2.3 7.8E-05 36.5 4.6 48 1-51 1-48 (209)
69 1g5t_A COB(I)alamin adenosyltr 78.4 16 0.00054 30.8 9.7 37 5-42 28-64 (196)
70 1j9j_A Stationary phase surviV 78.3 12 0.0004 33.0 9.2 39 7-49 2-41 (247)
71 2x0d_A WSAF; GT4 family, trans 78.1 1.4 4.8E-05 42.4 3.6 41 3-44 44-89 (413)
72 3nb0_A Glycogen [starch] synth 77.3 8.6 0.0003 39.3 9.0 87 343-438 513-615 (725)
73 3lqk_A Dipicolinate synthase s 76.5 2.9 0.0001 35.6 4.7 47 1-49 3-50 (201)
74 1l5x_A SurviVal protein E; str 75.3 10 0.00034 34.1 8.1 39 7-49 2-41 (280)
75 1ccw_A Protein (glutamate muta 75.3 3.4 0.00012 32.7 4.6 42 5-47 3-44 (137)
76 3q0i_A Methionyl-tRNA formyltr 74.1 19 0.00066 33.0 9.9 34 5-44 7-40 (318)
77 1uqt_A Alpha, alpha-trehalose- 73.7 17 0.00057 35.6 10.1 109 334-468 333-454 (482)
78 3tqr_A Phosphoribosylglycinami 72.7 7.7 0.00026 33.3 6.5 108 1-147 1-114 (215)
79 2yxb_A Coenzyme B12-dependent 71.9 3.8 0.00013 33.5 4.2 41 4-45 17-57 (161)
80 3da8_A Probable 5'-phosphoribo 71.2 4.9 0.00017 34.6 4.9 105 4-147 11-120 (215)
81 2ejb_A Probable aromatic acid 70.8 5.1 0.00017 33.7 4.8 44 6-51 2-45 (189)
82 2p90_A Hypothetical protein CG 70.4 50 0.0017 30.2 11.8 181 279-469 102-306 (319)
83 3n7t_A Macrophage binding prot 70.3 7.5 0.00026 34.3 6.0 43 1-44 5-58 (247)
84 3qjg_A Epidermin biosynthesis 69.7 6.7 0.00023 32.5 5.2 44 6-51 6-49 (175)
85 1kjq_A GART 2, phosphoribosylg 69.1 37 0.0013 31.8 11.3 38 1-44 7-44 (391)
86 3mcu_A Dipicolinate synthase, 69.0 4.6 0.00016 34.5 4.2 45 1-47 1-46 (207)
87 3ih5_A Electron transfer flavo 67.7 9.5 0.00032 32.9 6.0 108 5-144 3-121 (217)
88 3pdi_B Nitrogenase MOFE cofact 67.6 33 0.0011 33.2 10.5 33 102-144 367-399 (458)
89 2e6c_A 5'-nucleotidase SURE; S 67.6 24 0.00083 30.9 8.6 55 7-65 2-57 (244)
90 1fmt_A Methionyl-tRNA FMet for 66.7 29 0.00099 31.7 9.4 34 4-43 2-35 (314)
91 1y80_A Predicted cobalamin bin 66.5 7.7 0.00026 33.1 5.2 43 5-48 88-130 (210)
92 3igf_A ALL4481 protein; two-do 66.1 4.7 0.00016 38.1 4.0 37 5-42 1-38 (374)
93 3tqq_A Methionyl-tRNA formyltr 66.0 21 0.00072 32.7 8.3 35 5-45 2-36 (314)
94 4dim_A Phosphoribosylglycinami 65.9 20 0.0007 33.8 8.7 35 4-44 6-40 (403)
95 2bw0_A 10-FTHFDH, 10-formyltet 65.8 22 0.00074 32.8 8.4 100 6-148 23-131 (329)
96 1jkx_A GART;, phosphoribosylgl 65.8 39 0.0013 28.8 9.5 102 7-147 2-110 (212)
97 1sbz_A Probable aromatic acid 65.4 6.1 0.00021 33.4 4.2 43 7-51 2-45 (197)
98 2iz6_A Molybdenum cofactor car 64.0 60 0.002 26.7 11.9 101 266-379 34-140 (176)
99 2hy5_B Intracellular sulfur ox 63.9 10 0.00035 29.9 5.0 48 1-49 1-51 (136)
100 4dzz_A Plasmid partitioning pr 63.0 32 0.0011 28.6 8.6 37 7-44 3-40 (206)
101 3kcq_A Phosphoribosylglycinami 62.6 43 0.0015 28.6 9.1 100 4-147 7-113 (215)
102 4ds3_A Phosphoribosylglycinami 62.3 31 0.0011 29.4 8.1 104 5-147 7-117 (209)
103 1g63_A Epidermin modifying enz 62.3 7.9 0.00027 32.2 4.3 44 6-51 3-46 (181)
104 2i2x_B MTAC, methyltransferase 61.7 8.9 0.0003 34.0 4.8 40 4-44 122-161 (258)
105 1mvl_A PPC decarboxylase athal 60.6 12 0.00042 31.9 5.3 44 5-51 19-62 (209)
106 1o97_C Electron transferring f 60.2 29 0.00099 30.8 7.9 41 99-146 101-147 (264)
107 3io3_A DEHA2D07832P; chaperone 60.0 16 0.00054 34.1 6.4 40 5-45 17-59 (348)
108 2i2c_A Probable inorganic poly 59.7 5.9 0.0002 35.5 3.3 53 351-423 36-94 (272)
109 1psw_A ADP-heptose LPS heptosy 59.2 79 0.0027 28.8 11.3 43 6-49 181-228 (348)
110 2pn1_A Carbamoylphosphate synt 58.6 33 0.0011 31.3 8.4 33 5-44 4-38 (331)
111 3ezx_A MMCP 1, monomethylamine 58.3 13 0.00044 31.9 5.1 45 4-49 91-135 (215)
112 3tov_A Glycosyl transferase fa 58.2 35 0.0012 31.6 8.6 99 6-146 186-288 (349)
113 1yt5_A Inorganic polyphosphate 57.6 5.8 0.0002 35.3 2.8 53 351-423 42-97 (258)
114 1efp_B ETF, protein (electron 57.3 33 0.0011 30.2 7.7 40 100-146 103-148 (252)
115 1meo_A Phosophoribosylglycinam 55.7 67 0.0023 27.3 9.1 103 7-147 2-110 (209)
116 3o1l_A Formyltetrahydrofolate 55.5 1.2E+02 0.0041 27.4 11.4 105 4-147 104-212 (302)
117 3u7q_B Nitrogenase molybdenum- 55.1 1E+02 0.0034 30.4 11.5 35 101-145 429-470 (523)
118 1p3y_1 MRSD protein; flavoprot 54.8 8.4 0.00029 32.5 3.2 45 5-51 8-52 (194)
119 2dwc_A PH0318, 433AA long hypo 54.3 1.1E+02 0.0039 28.9 11.8 36 3-44 17-52 (433)
120 2pju_A Propionate catabolism o 54.2 24 0.00084 30.4 6.2 67 351-422 64-153 (225)
121 2qyt_A 2-dehydropantoate 2-red 53.1 5.4 0.00018 36.5 1.9 36 1-42 4-45 (317)
122 3p9x_A Phosphoribosylglycinami 52.7 48 0.0017 28.2 7.7 105 5-147 2-112 (211)
123 3mc3_A DSRE/DSRF-like family p 51.3 27 0.00094 27.2 5.6 42 5-47 15-59 (134)
124 1id1_A Putative potassium chan 51.2 11 0.00037 30.1 3.3 32 6-43 4-35 (153)
125 2q6t_A DNAB replication FORK h 50.4 35 0.0012 32.9 7.3 42 7-48 202-243 (444)
126 2qs7_A Uncharacterized protein 50.2 20 0.00069 28.4 4.7 44 7-51 9-53 (144)
127 3sbx_A Putative uncharacterize 49.6 1E+02 0.0035 25.6 9.1 103 266-378 33-146 (189)
128 3ouz_A Biotin carboxylase; str 48.6 43 0.0015 32.2 7.7 34 5-44 6-39 (446)
129 1rcu_A Conserved hypothetical 48.4 1.1E+02 0.0039 25.5 9.2 98 265-378 46-150 (195)
130 3llv_A Exopolyphosphatase-rela 47.9 11 0.00038 29.5 2.8 35 4-44 5-39 (141)
131 1jx7_A Hypothetical protein YC 47.2 21 0.00073 26.7 4.3 42 7-49 3-49 (117)
132 2bln_A Protein YFBG; transfera 47.1 62 0.0021 29.3 8.0 33 6-44 1-33 (305)
133 3e35_A Uncharacterized protein 47.0 66 0.0023 29.4 8.1 151 278-439 104-274 (325)
134 3zzm_A Bifunctional purine bio 47.0 31 0.0011 33.6 6.0 49 6-65 10-58 (523)
135 1kjn_A MTH0777; hypotethical p 46.8 28 0.00097 27.6 4.7 47 6-53 7-55 (157)
136 3lrx_A Putative hydrogenase; a 45.9 17 0.00058 29.3 3.7 35 6-44 24-58 (158)
137 1qgu_B Protein (nitrogenase mo 45.8 1.5E+02 0.0051 29.1 11.2 34 101-144 425-465 (519)
138 2q5c_A NTRC family transcripti 45.6 20 0.00069 30.2 4.2 69 349-422 50-141 (196)
139 3mjf_A Phosphoribosylamine--gl 45.4 39 0.0013 32.4 6.8 25 5-35 3-27 (431)
140 1p9o_A Phosphopantothenoylcyst 45.4 13 0.00046 33.9 3.2 36 8-44 40-89 (313)
141 1wcv_1 SOJ, segregation protei 45.1 17 0.00059 31.9 3.9 43 1-44 1-45 (257)
142 1f0y_A HCDH, L-3-hydroxyacyl-C 44.8 15 0.0005 33.4 3.4 37 1-43 11-47 (302)
143 1uan_A Hypothetical protein TT 44.6 61 0.0021 27.8 7.3 22 97-125 82-103 (227)
144 3hn2_A 2-dehydropantoate 2-red 44.6 27 0.00092 31.8 5.3 46 6-63 3-48 (312)
145 3to5_A CHEY homolog; alpha(5)b 44.6 42 0.0014 26.1 5.7 39 103-148 50-97 (134)
146 2gt1_A Lipopolysaccharide hept 44.4 93 0.0032 28.1 9.0 97 6-146 179-280 (326)
147 2r8r_A Sensor protein; KDPD, P 43.8 32 0.0011 29.7 5.2 39 5-44 6-44 (228)
148 3dfu_A Uncharacterized protein 43.4 15 0.00052 31.9 3.1 37 1-43 2-38 (232)
149 3bgw_A DNAB-like replicative h 43.4 43 0.0015 32.3 6.7 41 7-48 199-239 (444)
150 3l7i_A Teichoic acid biosynthe 42.6 18 0.00062 37.5 4.2 118 336-469 603-722 (729)
151 2vqe_B 30S ribosomal protein S 42.4 1.7E+02 0.006 25.5 9.8 32 117-148 158-191 (256)
152 3kkl_A Probable chaperone prot 42.4 37 0.0012 29.7 5.5 39 5-44 3-52 (244)
153 1qzu_A Hypothetical protein MD 41.4 32 0.0011 29.2 4.8 47 4-51 18-64 (206)
154 1qkk_A DCTD, C4-dicarboxylate 41.2 77 0.0026 24.5 7.0 49 369-423 74-122 (155)
155 3dfz_A SIRC, precorrin-2 dehyd 41.1 94 0.0032 26.6 7.8 151 273-443 27-186 (223)
156 4g6h_A Rotenone-insensitive NA 41.0 18 0.00061 35.6 3.6 35 4-44 41-75 (502)
157 2lpm_A Two-component response 40.7 21 0.00071 27.4 3.2 37 102-145 45-86 (123)
158 1use_A VAsp, vasodilator-stimu 40.6 49 0.0017 20.1 4.0 42 405-452 2-43 (45)
159 3obi_A Formyltetrahydrofolate 40.4 2E+02 0.0069 25.7 11.0 106 3-147 87-197 (288)
160 3ghy_A Ketopantoate reductase 40.2 21 0.00073 32.9 3.8 47 5-62 3-49 (335)
161 1w85_B Pyruvate dehydrogenase 40.1 1.1E+02 0.0038 27.8 8.7 17 405-421 307-323 (324)
162 4egb_A DTDP-glucose 4,6-dehydr 40.1 1.6E+02 0.0054 26.6 10.0 34 3-41 22-57 (346)
163 3i83_A 2-dehydropantoate 2-red 39.6 29 0.00098 31.7 4.6 46 6-63 3-48 (320)
164 3nrb_A Formyltetrahydrofolate 39.3 2.1E+02 0.0071 25.5 11.4 109 3-147 86-196 (287)
165 2lnd_A De novo designed protei 39.3 43 0.0015 23.1 4.1 50 368-422 49-101 (112)
166 3k96_A Glycerol-3-phosphate de 39.2 19 0.00063 33.7 3.3 45 1-51 25-70 (356)
167 1o97_D Electron transferring f 39.1 78 0.0027 28.9 7.3 42 98-146 75-119 (320)
168 3n0v_A Formyltetrahydrofolate 39.0 2.1E+02 0.0072 25.5 11.6 106 3-147 88-197 (286)
169 3irs_A Uncharacterized protein 38.8 1.2E+02 0.0039 27.1 8.5 136 293-439 136-280 (291)
170 3s40_A Diacylglycerol kinase; 38.8 75 0.0026 28.6 7.3 80 281-378 12-97 (304)
171 2fb6_A Conserved hypothetical 38.4 30 0.001 26.3 3.8 44 1-46 4-51 (117)
172 2gk4_A Conserved hypothetical 38.3 13 0.00044 32.3 1.8 22 22-44 32-53 (232)
173 3ro0_A Pyrrolidone-carboxylate 38.2 50 0.0017 28.4 5.5 27 5-31 2-30 (223)
174 3afo_A NADH kinase POS5; alpha 38.2 17 0.0006 34.3 2.9 60 342-423 108-172 (388)
175 4gi5_A Quinone reductase; prot 38.0 47 0.0016 29.7 5.6 35 5-40 22-59 (280)
176 2w70_A Biotin carboxylase; lig 38.0 80 0.0027 30.2 7.8 32 6-43 3-34 (449)
177 3sz8_A 2-dehydro-3-deoxyphosph 37.5 1.7E+02 0.0058 26.1 9.1 18 300-317 126-143 (285)
178 3vtf_A UDP-glucose 6-dehydroge 37.5 1.3E+02 0.0045 28.8 8.9 32 4-41 20-51 (444)
179 2yvq_A Carbamoyl-phosphate syn 37.4 54 0.0018 25.8 5.3 97 9-144 27-131 (143)
180 2ixd_A LMBE-related protein; h 37.4 97 0.0033 26.9 7.4 21 97-124 84-104 (242)
181 3qvl_A Putative hydantoin race 37.3 2E+02 0.007 24.8 10.1 37 6-43 2-39 (245)
182 3gl9_A Response regulator; bet 37.1 50 0.0017 24.5 5.0 31 117-147 46-85 (122)
183 4e5s_A MCCFLIKE protein (BA_56 37.0 43 0.0015 30.8 5.3 73 292-378 62-136 (331)
184 4ep4_A Crossover junction endo 36.8 90 0.0031 25.3 6.6 46 95-147 48-108 (166)
185 2vpq_A Acetyl-COA carboxylase; 36.8 62 0.0021 31.0 6.8 33 6-44 2-34 (451)
186 3s2u_A UDP-N-acetylglucosamine 36.8 77 0.0026 29.4 7.2 37 279-317 3-39 (365)
187 2q5c_A NTRC family transcripti 36.7 25 0.00086 29.6 3.4 41 101-148 130-170 (196)
188 3hn7_A UDP-N-acetylmuramate-L- 36.5 1.7E+02 0.0058 28.7 9.9 34 4-42 18-51 (524)
189 3lyu_A Putative hydrogenase; t 36.5 31 0.001 27.2 3.7 36 5-44 18-53 (142)
190 3eag_A UDP-N-acetylmuramate:L- 36.4 36 0.0012 31.2 4.7 34 4-42 3-36 (326)
191 2an1_A Putative kinase; struct 36.4 18 0.0006 32.7 2.6 71 295-378 21-95 (292)
192 4b4o_A Epimerase family protei 36.2 25 0.00086 31.5 3.6 33 6-43 1-33 (298)
193 1y56_B Sarcosine oxidase; dehy 36.2 21 0.00072 33.3 3.2 37 1-43 1-37 (382)
194 2r85_A PURP protein PF1517; AT 36.1 32 0.0011 31.4 4.3 34 5-45 2-35 (334)
195 2g1u_A Hypothetical protein TM 35.7 41 0.0014 26.7 4.5 34 5-44 19-52 (155)
196 1c0p_A D-amino acid oxidase; a 35.6 31 0.0011 31.9 4.3 35 1-41 2-36 (363)
197 2zki_A 199AA long hypothetical 35.3 34 0.0012 28.4 4.1 39 1-42 1-40 (199)
198 3goc_A Endonuclease V; alpha-b 35.2 52 0.0018 28.4 5.1 42 99-145 94-142 (237)
199 3lac_A Pyrrolidone-carboxylate 34.9 51 0.0017 28.2 5.0 27 5-31 1-29 (215)
200 3bul_A Methionine synthase; tr 34.8 45 0.0015 33.3 5.3 44 5-49 98-141 (579)
201 1rw7_A YDR533CP; alpha-beta sa 34.7 69 0.0024 27.7 6.1 39 5-44 3-52 (243)
202 3hwr_A 2-dehydropantoate 2-red 34.5 26 0.00088 32.0 3.4 42 4-51 18-59 (318)
203 3dhn_A NAD-dependent epimerase 34.5 40 0.0014 28.5 4.5 38 1-44 1-38 (227)
204 3c24_A Putative oxidoreductase 34.4 35 0.0012 30.4 4.3 34 4-43 10-44 (286)
205 3ic5_A Putative saccharopine d 34.3 37 0.0013 25.0 3.8 35 4-44 4-39 (118)
206 1q57_A DNA primase/helicase; d 34.1 95 0.0033 30.3 7.7 40 8-48 245-285 (503)
207 3abi_A Putative uncharacterize 33.6 1.2E+02 0.004 28.1 7.9 36 1-43 12-47 (365)
208 2d1p_B TUSC, hypothetical UPF0 33.6 56 0.0019 24.7 4.7 39 7-46 3-44 (119)
209 3gi1_A LBP, laminin-binding pr 33.6 1.3E+02 0.0043 26.9 7.8 80 34-146 178-259 (286)
210 1qv9_A F420-dependent methylen 33.5 1.2E+02 0.004 26.2 6.8 45 98-149 52-102 (283)
211 3pfn_A NAD kinase; structural 32.8 22 0.00074 33.3 2.5 26 351-376 109-138 (365)
212 4hps_A Pyrrolidone-carboxylate 32.7 65 0.0022 27.8 5.4 28 4-31 22-51 (228)
213 1xrs_B D-lysine 5,6-aminomutas 32.4 33 0.0011 30.3 3.5 45 4-49 119-172 (262)
214 1u0t_A Inorganic polyphosphate 32.4 21 0.00072 32.5 2.4 28 351-378 76-107 (307)
215 3pnx_A Putative sulfurtransfer 32.3 68 0.0023 25.9 5.1 49 1-51 2-50 (160)
216 3sc4_A Short chain dehydrogena 32.1 1.4E+02 0.0049 26.2 8.0 34 7-44 10-43 (285)
217 3ty2_A 5'-nucleotidase SURE; s 32.1 52 0.0018 29.0 4.7 43 3-48 9-51 (261)
218 2xj4_A MIPZ; replication, cell 31.7 44 0.0015 29.8 4.4 39 5-44 3-43 (286)
219 3lou_A Formyltetrahydrofolate 31.7 2.8E+02 0.0096 24.8 12.4 106 3-147 93-202 (292)
220 3u7q_A Nitrogenase molybdenum- 31.5 35 0.0012 33.5 3.9 35 101-145 408-442 (492)
221 2pju_A Propionate catabolism o 31.3 42 0.0014 28.9 4.0 41 99-146 140-180 (225)
222 1z7e_A Protein aRNA; rossmann 31.1 73 0.0025 32.4 6.5 42 101-149 66-108 (660)
223 1bg6_A N-(1-D-carboxylethyl)-L 31.0 35 0.0012 31.5 3.7 33 5-43 4-36 (359)
224 1efv_B Electron transfer flavo 31.0 83 0.0028 27.6 5.9 41 99-146 105-151 (255)
225 3t6k_A Response regulator rece 30.9 81 0.0028 23.8 5.4 42 100-148 38-88 (136)
226 3fwz_A Inner membrane protein 30.9 29 0.00098 27.1 2.7 35 5-45 7-41 (140)
227 4ehi_A Bifunctional purine bio 30.8 55 0.0019 31.9 4.9 47 18-75 33-79 (534)
228 2h78_A Hibadh, 3-hydroxyisobut 30.6 40 0.0014 30.3 4.0 34 4-43 2-35 (302)
229 2w36_A Endonuclease V; hypoxan 30.6 58 0.002 28.0 4.6 42 99-145 90-138 (225)
230 2vou_A 2,6-dihydroxypyridine h 30.4 40 0.0014 31.7 4.1 35 1-41 1-35 (397)
231 2an1_A Putative kinase; struct 30.4 43 0.0015 30.0 4.1 40 1-41 1-41 (292)
232 3g0o_A 3-hydroxyisobutyrate de 30.3 30 0.001 31.2 3.1 36 3-44 5-40 (303)
233 2gwr_A DNA-binding response re 30.1 2.5E+02 0.0084 23.6 10.9 80 1-148 1-86 (238)
234 2hmt_A YUAA protein; RCK, KTN, 30.0 25 0.00086 27.1 2.2 35 4-44 5-39 (144)
235 2wam_A RV2714, conserved hypot 29.9 3.3E+02 0.011 25.1 13.8 181 279-469 142-343 (351)
236 3kjh_A CO dehydrogenase/acetyl 29.9 42 0.0014 28.8 3.9 37 7-44 2-38 (254)
237 3f6r_A Flavodoxin; FMN binding 29.9 56 0.0019 25.5 4.3 38 6-44 2-40 (148)
238 2zbw_A Thioredoxin reductase; 29.8 31 0.001 31.4 3.1 38 1-44 1-38 (335)
239 3ug7_A Arsenical pump-driving 29.7 58 0.002 30.1 5.0 41 4-45 24-65 (349)
240 3aek_B Light-independent proto 29.7 41 0.0014 33.3 4.1 34 101-144 340-373 (525)
241 2ozl_B PDHE1-B, pyruvate dehyd 29.6 1.8E+02 0.0061 26.7 8.3 114 277-421 215-340 (341)
242 2xdq_B Light-independent proto 29.6 39 0.0013 33.3 3.9 35 101-145 363-397 (511)
243 2qxy_A Response regulator; reg 29.5 1.7E+02 0.0058 21.9 7.2 49 369-423 74-122 (142)
244 3nxa_A Protein S100-A16; S100 29.4 46 0.0016 24.3 3.4 60 404-471 28-87 (100)
245 3pdi_A Nitrogenase MOFE cofact 29.2 32 0.0011 33.6 3.2 35 101-145 392-426 (483)
246 2a33_A Hypothetical protein; s 29.2 1.4E+02 0.0049 25.3 6.9 44 334-378 93-147 (215)
247 1gsa_A Glutathione synthetase; 29.1 45 0.0015 29.9 4.1 38 6-44 2-42 (316)
248 2hbv_A 2-amino-3-carboxymucona 28.9 73 0.0025 29.0 5.5 25 292-316 155-179 (334)
249 3qrx_B Melittin; calcium-bindi 28.9 10 0.00035 19.5 -0.2 18 359-376 1-18 (26)
250 1lss_A TRK system potassium up 28.8 36 0.0012 26.0 3.0 34 5-44 4-37 (140)
251 2ew2_A 2-dehydropantoate 2-red 28.8 39 0.0013 30.4 3.6 34 5-44 3-36 (316)
252 3ga2_A Endonuclease V; alpha-b 28.8 64 0.0022 28.1 4.6 42 99-145 96-144 (246)
253 3obb_A Probable 3-hydroxyisobu 28.8 46 0.0016 30.1 4.0 33 4-42 2-34 (300)
254 2hy5_A Putative sulfurtransfer 28.7 79 0.0027 24.2 4.9 37 9-46 5-44 (130)
255 3giu_A Pyrrolidone-carboxylate 28.6 73 0.0025 27.1 5.0 27 5-31 3-31 (215)
256 3qsg_A NAD-binding phosphogluc 28.2 32 0.0011 31.3 2.9 35 3-43 22-57 (312)
257 2cob_A LCOR protein; MLR2, KIA 28.0 68 0.0023 21.7 3.6 31 403-436 10-40 (70)
258 3doj_A AT3G25530, dehydrogenas 27.9 60 0.0021 29.3 4.7 35 4-44 20-54 (310)
259 4h1h_A LMO1638 protein; MCCF-l 27.9 66 0.0022 29.5 4.9 73 292-378 62-136 (327)
260 2gkg_A Response regulator homo 27.9 96 0.0033 22.6 5.3 48 369-423 79-126 (127)
261 3m6m_D Sensory/regulatory prot 27.8 72 0.0025 24.4 4.6 31 117-147 58-99 (143)
262 3sr3_A Microcin immunity prote 27.8 67 0.0023 29.6 4.9 73 292-378 63-137 (336)
263 1mio_B Nitrogenase molybdenum 27.8 51 0.0017 31.9 4.3 34 101-144 376-409 (458)
264 3of5_A Dethiobiotin synthetase 27.5 65 0.0022 27.7 4.6 37 4-41 3-40 (228)
265 3qua_A Putative uncharacterize 27.5 1.2E+02 0.0042 25.4 6.1 103 266-378 42-155 (199)
266 2vo1_A CTP synthase 1; pyrimid 27.4 59 0.002 28.8 4.1 40 5-45 22-64 (295)
267 3gpi_A NAD-dependent epimerase 27.2 59 0.002 28.7 4.5 34 5-44 3-36 (286)
268 1g8m_A Aicar transformylase-IM 27.2 52 0.0018 32.5 4.2 53 1-65 1-53 (593)
269 2yrx_A Phosphoribosylglycinami 27.2 3.6E+02 0.012 25.5 10.4 34 4-42 20-53 (451)
270 3q9l_A Septum site-determining 27.2 56 0.0019 28.3 4.2 38 6-44 2-41 (260)
271 3end_A Light-independent proto 27.1 61 0.0021 29.1 4.5 38 5-43 41-78 (307)
272 2qk4_A Trifunctional purine bi 26.9 3.6E+02 0.012 25.5 10.3 33 6-43 25-57 (452)
273 4hb9_A Similarities with proba 26.9 42 0.0014 31.3 3.6 29 6-40 2-30 (412)
274 3r6d_A NAD-dependent epimerase 26.5 74 0.0025 26.7 4.8 36 5-44 4-40 (221)
275 1ehi_A LMDDL2, D-alanine:D-lac 26.3 63 0.0022 30.2 4.6 37 5-42 3-44 (377)
276 4gxh_A Pyrrolidone-carboxylate 26.3 67 0.0023 27.4 4.3 27 5-31 2-30 (216)
277 3v2h_A D-beta-hydroxybutyrate 26.3 69 0.0024 28.4 4.7 34 5-42 24-57 (281)
278 2qv7_A Diacylglycerol kinase D 26.2 1.2E+02 0.004 27.8 6.4 81 281-378 28-114 (337)
279 3kvo_A Hydroxysteroid dehydrog 26.1 3E+02 0.01 25.1 9.3 34 7-44 46-79 (346)
280 4dgk_A Phytoene dehydrogenase; 26.0 29 0.00098 33.9 2.2 30 5-40 1-30 (501)
281 2z04_A Phosphoribosylaminoimid 25.8 75 0.0026 29.3 5.1 34 5-44 1-34 (365)
282 2etv_A Iron(III) ABC transport 25.7 70 0.0024 29.4 4.8 29 117-145 96-125 (346)
283 3zq6_A Putative arsenical pump 25.7 61 0.0021 29.5 4.3 38 6-44 14-52 (324)
284 3rkr_A Short chain oxidoreduct 25.6 82 0.0028 27.4 5.0 34 7-44 30-63 (262)
285 4eg0_A D-alanine--D-alanine li 25.5 97 0.0033 27.9 5.7 39 5-44 13-55 (317)
286 1col_A Colicin A; antibacteria 25.5 49 0.0017 27.7 3.1 40 425-471 30-69 (204)
287 3cky_A 2-hydroxymethyl glutara 25.5 70 0.0024 28.5 4.7 36 1-43 1-36 (301)
288 2wm1_A 2-amino-3-carboxymucona 25.5 68 0.0023 29.2 4.6 70 235-316 104-176 (336)
289 4dll_A 2-hydroxy-3-oxopropiona 25.4 75 0.0026 28.8 4.9 35 4-44 30-64 (320)
290 3i6i_A Putative leucoanthocyan 25.1 3.7E+02 0.013 24.1 11.5 34 6-44 11-44 (346)
291 1g3q_A MIND ATPase, cell divis 25.0 69 0.0024 27.2 4.4 36 8-44 5-41 (237)
292 1cp2_A CP2, nitrogenase iron p 24.8 66 0.0022 28.1 4.3 36 6-42 2-37 (269)
293 1zl0_A Hypothetical protein PA 24.8 96 0.0033 28.1 5.3 75 291-379 63-139 (311)
294 2x3n_A Probable FAD-dependent 24.8 40 0.0014 31.6 3.0 35 1-41 2-36 (399)
295 1pzg_A LDH, lactate dehydrogen 24.7 41 0.0014 30.9 2.9 38 1-44 5-43 (331)
296 3kcn_A Adenylate cyclase homol 24.6 1.7E+02 0.0057 22.4 6.3 49 369-423 75-124 (151)
297 3lp8_A Phosphoribosylamine-gly 24.3 1.6E+02 0.0055 28.1 7.2 32 4-41 20-52 (442)
298 2jk1_A HUPR, hydrogenase trans 24.0 2.2E+02 0.0075 21.2 6.9 50 369-423 71-120 (139)
299 1pq4_A Periplasmic binding pro 23.8 3.8E+02 0.013 23.7 10.1 41 100-147 227-269 (291)
300 4huj_A Uncharacterized protein 23.8 42 0.0014 28.6 2.6 32 4-41 22-53 (220)
301 1ydh_A AT5G11950; structural g 23.8 44 0.0015 28.6 2.7 49 345-395 102-162 (216)
302 3ax6_A Phosphoribosylaminoimid 23.8 95 0.0033 28.8 5.4 33 6-44 2-34 (380)
303 1tvm_A PTS system, galactitol- 23.6 1E+02 0.0036 22.9 4.5 37 4-41 20-57 (113)
304 3uce_A Dehydrogenase; rossmann 23.5 74 0.0025 26.8 4.2 37 1-41 1-37 (223)
305 1eiw_A Hypothetical protein MT 23.5 2.2E+02 0.0075 21.2 6.2 65 346-421 36-109 (111)
306 4hcj_A THIJ/PFPI domain protei 23.4 76 0.0026 26.0 4.0 42 1-44 4-45 (177)
307 4hn9_A Iron complex transport 23.3 68 0.0023 29.3 4.2 30 117-146 116-145 (335)
308 2ph1_A Nucleotide-binding prot 23.3 76 0.0026 27.7 4.4 40 5-45 17-58 (262)
309 3s55_A Putative short-chain de 23.3 88 0.003 27.5 4.8 33 6-42 10-42 (281)
310 1e2b_A Enzyme IIB-cellobiose; 23.1 1.2E+02 0.004 22.4 4.7 36 5-41 3-38 (106)
311 3pxx_A Carveol dehydrogenase; 23.0 94 0.0032 27.3 5.0 33 6-42 10-42 (287)
312 1hjr_A Holliday junction resol 23.0 1.5E+02 0.0051 23.8 5.6 44 96-146 45-103 (158)
313 3lk7_A UDP-N-acetylmuramoylala 22.9 1.3E+02 0.0044 28.9 6.2 33 4-42 8-40 (451)
314 3li6_A Calcium-binding protein 22.9 1.5E+02 0.005 18.6 5.1 52 403-467 13-64 (66)
315 2c5m_A CTP synthase; cytidine 22.8 55 0.0019 28.8 3.0 41 4-45 21-64 (294)
316 1iow_A DD-ligase, DDLB, D-ALA\ 22.8 1.1E+02 0.0036 27.2 5.4 38 6-44 3-44 (306)
317 3u9t_A MCC alpha, methylcroton 22.7 2E+02 0.0067 29.4 7.8 34 6-45 29-62 (675)
318 1e4e_A Vancomycin/teicoplanin 22.7 67 0.0023 29.4 4.0 37 5-42 3-43 (343)
319 3g1w_A Sugar ABC transporter; 22.7 3.8E+02 0.013 23.3 10.3 30 117-146 61-94 (305)
320 3orf_A Dihydropteridine reduct 22.6 81 0.0028 27.3 4.4 36 4-43 20-55 (251)
321 4h15_A Short chain alcohol deh 22.6 1.1E+02 0.0037 26.9 5.2 32 7-42 12-43 (261)
322 1e7w_A Pteridine reductase; di 22.6 86 0.003 27.9 4.6 32 6-41 9-40 (291)
323 1pno_A NAD(P) transhydrogenase 22.5 81 0.0028 25.5 3.7 38 6-44 24-64 (180)
324 3c3m_A Response regulator rece 22.5 1.4E+02 0.0046 22.4 5.3 31 117-147 47-86 (138)
325 4da9_A Short-chain dehydrogena 22.4 98 0.0034 27.3 4.9 33 6-42 29-61 (280)
326 3to5_A CHEY homolog; alpha(5)b 22.4 1.4E+02 0.0048 23.0 5.3 106 293-421 21-132 (134)
327 1xjc_A MOBB protein homolog; s 22.3 1.2E+02 0.004 24.7 4.9 40 4-44 3-42 (169)
328 2pd6_A Estradiol 17-beta-dehyd 22.3 1E+02 0.0035 26.6 5.0 34 7-44 8-41 (264)
329 3fgn_A Dethiobiotin synthetase 22.3 87 0.003 27.4 4.4 36 5-41 26-62 (251)
330 3itj_A Thioredoxin reductase 1 22.2 41 0.0014 30.4 2.4 33 4-42 21-53 (338)
331 1d4o_A NADP(H) transhydrogenas 22.2 82 0.0028 25.6 3.7 37 7-44 24-63 (184)
332 2a33_A Hypothetical protein; s 22.1 1.2E+02 0.0041 25.8 5.1 40 3-43 11-54 (215)
333 2r6a_A DNAB helicase, replicat 22.0 90 0.0031 30.0 4.9 42 7-48 205-246 (454)
334 2o1e_A YCDH; alpha-beta protei 22.0 2.3E+02 0.0078 25.6 7.4 30 117-146 239-270 (312)
335 1oi4_A Hypothetical protein YH 21.9 1.7E+02 0.0059 24.0 6.1 40 3-44 21-60 (193)
336 4eso_A Putative oxidoreductase 21.9 1E+02 0.0034 26.7 4.8 34 6-43 8-41 (255)
337 3gl9_A Response regulator; bet 21.8 1.6E+02 0.0056 21.4 5.5 47 369-421 75-121 (122)
338 3fwy_A Light-independent proto 21.8 84 0.0029 28.6 4.4 40 4-44 46-86 (314)
339 2a5l_A Trp repressor binding p 21.8 1.1E+02 0.0036 25.2 4.8 37 5-42 5-42 (200)
340 3nrc_A Enoyl-[acyl-carrier-pro 21.8 1.1E+02 0.0038 26.9 5.2 35 6-44 26-62 (280)
341 2raf_A Putative dinucleotide-b 21.7 79 0.0027 26.6 4.0 33 4-42 18-50 (209)
342 1evy_A Glycerol-3-phosphate de 21.6 48 0.0017 30.8 2.8 32 7-44 17-48 (366)
343 3ius_A Uncharacterized conserv 21.4 51 0.0018 29.0 2.8 35 5-45 5-39 (286)
344 3md9_A Hemin-binding periplasm 21.4 89 0.003 27.0 4.4 35 104-145 53-89 (255)
345 2ip4_A PURD, phosphoribosylami 21.3 5E+02 0.017 24.1 10.3 32 6-42 1-32 (417)
346 3bbn_B Ribosomal protein S2; s 21.3 3.4E+02 0.012 23.3 7.8 31 117-147 157-189 (231)
347 2ew8_A (S)-1-phenylethanol deh 21.2 1E+02 0.0035 26.5 4.7 34 7-44 8-41 (249)
348 4g65_A TRK system potassium up 21.1 39 0.0014 32.7 2.1 34 5-44 3-36 (461)
349 4ezb_A Uncharacterized conserv 21.0 53 0.0018 29.9 2.9 33 5-43 24-57 (317)
350 1xp8_A RECA protein, recombina 21.0 1.7E+02 0.0059 27.1 6.4 39 7-46 76-114 (366)
351 2l2q_A PTS system, cellobiose- 21.0 92 0.0032 23.0 3.7 35 4-39 3-37 (109)
352 4dyv_A Short-chain dehydrogena 20.9 96 0.0033 27.3 4.5 35 5-43 27-61 (272)
353 1a9x_A Carbamoyl phosphate syn 20.9 2.5E+02 0.0087 30.4 8.6 40 4-44 558-603 (1073)
354 4e5v_A Putative THUA-like prot 20.8 1.1E+02 0.0039 27.2 4.9 39 3-43 2-43 (281)
355 3l3b_A ES1 family protein; ssg 20.8 1.6E+02 0.0056 25.4 5.9 38 6-44 24-65 (242)
356 3pdu_A 3-hydroxyisobutyrate de 20.7 73 0.0025 28.3 3.7 34 5-44 1-34 (287)
357 3qjg_A Epidermin biosynthesis 20.6 2.8E+02 0.0096 22.6 6.9 113 279-397 6-143 (175)
358 3grp_A 3-oxoacyl-(acyl carrier 20.6 1.2E+02 0.0042 26.4 5.1 35 6-44 27-61 (266)
359 1mio_A Nitrogenase molybdenum 20.6 91 0.0031 30.8 4.6 35 100-144 446-480 (533)
360 3kuu_A Phosphoribosylaminoimid 20.3 1.6E+02 0.0054 24.0 5.1 38 5-44 12-51 (174)
361 3ea0_A ATPase, para family; al 20.3 90 0.0031 26.6 4.2 37 7-44 6-44 (245)
362 3l4b_C TRKA K+ channel protien 20.3 36 0.0012 28.8 1.5 33 7-45 2-34 (218)
363 3foj_A Uncharacterized protein 20.3 2E+02 0.0067 20.4 5.5 31 6-41 57-87 (100)
364 2afh_E Nitrogenase iron protei 20.3 90 0.0031 27.6 4.2 37 6-43 3-39 (289)
365 3dii_A Short-chain dehydrogena 20.3 98 0.0033 26.6 4.4 34 7-44 3-36 (247)
366 1u0t_A Inorganic polyphosphate 20.3 97 0.0033 28.0 4.4 36 5-41 4-40 (307)
367 3dm5_A SRP54, signal recogniti 20.2 1.2E+02 0.0041 29.1 5.2 41 6-47 101-141 (443)
368 2c5a_A GDP-mannose-3', 5'-epim 20.2 86 0.0029 29.1 4.2 36 3-43 27-62 (379)
369 3cx3_A Lipoprotein; zinc-bindi 20.2 2.2E+02 0.0074 25.2 6.7 40 100-146 216-257 (284)
370 3f67_A Putative dienelactone h 20.2 1.3E+02 0.0044 25.0 5.2 36 6-42 32-67 (241)
371 3v8b_A Putative dehydrogenase, 20.1 1E+02 0.0034 27.3 4.5 35 6-44 28-62 (283)
372 2fsv_C NAD(P) transhydrogenase 20.1 94 0.0032 25.8 3.7 37 7-44 48-87 (203)
373 2r6j_A Eugenol synthase 1; phe 20.0 83 0.0029 28.2 4.0 33 7-44 13-45 (318)
374 1wrd_A TOM1, target of MYB pro 20.0 1.4E+02 0.0048 21.9 4.5 39 428-471 17-58 (103)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=3.2e-66 Score=511.61 Aligned_cols=433 Identities=27% Similarity=0.402 Sum_probs=346.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCC--cEEEEEcCCcchhhhhccCCC-CCCceEEecCCCCCCCCCCCCCCCC
Q 047833 4 RKETIVLFPFMAQGHIIPFLALALHLEKTNK--YTITFVNTPLNLRKLKSSVPQ-NSSINLLEIPFDSIDHNLPPCTENT 80 (473)
Q Consensus 4 ~~~~il~~~~~~~GH~~p~l~La~~L~~~rG--h~Vt~~~~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~ 80 (473)
.+.||+++|+|++||++|++.||+.|.+ +| +.|||++++.+...+.+.... ..+++|..+| ++++++.+..
T Consensus 12 ~~~hvv~~P~p~~GHi~P~l~Lak~L~~-~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ip-----dglp~~~~~~ 85 (454)
T 3hbf_A 12 NLLHVAVLAFPFGTHAAPLLSLVKKIAT-EAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVH-----DGLPKGYVSS 85 (454)
T ss_dssp CCCEEEEECCCSSSSHHHHHHHHHHHHH-HCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECC-----CCCCTTCCCC
T ss_pred CCCEEEEEcCCcccHHHHHHHHHHHHHh-CCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecC-----CCCCCCcccc
Confidence 3679999999999999999999999999 99 999999998766665443211 1578999888 4677766554
Q ss_pred CCCChhhHHHHHHHHHhhhHHHHHHHHhHhhhcCCCCccEEEECCCcchHHHHHHHhCCceEEEecchHHHHHHHhhhhc
Q 047833 81 DSVPYHLVSKLIEATLSFKPHFKKLVNDLIDEQNGYKPLCIITDMFFGWCKEIAQEYGIFHAIFIGGGGFGFACYYSLWV 160 (473)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~ 160 (473)
.+ +...+..+.... .+.+++.+++...+... ++||||+|.++.|+..+|+++|||++.++++++..+..+++.+.
T Consensus 86 ~~-~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~-~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~ 160 (454)
T 3hbf_A 86 GN-PREPIFLFIKAM---QENFKHVIDEAVAETGK-NITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDL 160 (454)
T ss_dssp SC-TTHHHHHHHHHH---HHHHHHHHHHHHHHHCC-CCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHH
T ss_pred CC-hHHHHHHHHHHH---HHHHHHHHHHHHhhcCC-CCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHH
Confidence 43 222333344333 33344444443222222 68999999999999999999999999999999998877776543
Q ss_pred cCCCC----CCCCCcc-cCCCCCCCCcCCccccchhhhhcCCCChHHHHHHHHhccccCCcEEEEcCccccchhHHHHHH
Q 047833 161 NLPHR----NMDSDEC-VLPDFPEASTIHATQLADYLRVADGSDSFSAILQKVLPQWMNADGILVNTVEELDKIGLMYFK 235 (473)
Q Consensus 161 ~~p~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 235 (473)
..... ....... .+|+++. ++.++++..+.. .....+.+++.+.......++++++||+++||+++++.++
T Consensus 161 ~~~~~~~~~~~~~~~~~~iPg~p~---~~~~dlp~~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~ 236 (454)
T 3hbf_A 161 IREKTGSKEVHDVKSIDVLPGFPE---LKASDLPEGVIK-DIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELN 236 (454)
T ss_dssp HHHTCCHHHHTTSSCBCCSTTSCC---BCGGGSCTTSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHH
T ss_pred HHhhcCCCccccccccccCCCCCC---cChhhCchhhcc-CCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHH
Confidence 22110 1112223 3788876 888888877664 4445667777788888888999999999999999999988
Q ss_pred hhcCCCeEEecccCCCccCCCCCCCCCCCchhhHhhhhcCCCCCeEEEEeeCCcccCCHHHHHHHHHHHHhCCCceEEEE
Q 047833 236 RKFGRSVWPIGPVLLSTENRGGAGKEYGISTELCKKWLDTKPYTSVLYVSFGSQNTIATSQMMQLAMALEASGKNFIWVV 315 (473)
Q Consensus 236 ~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~ 315 (473)
..+ +++++|||++...... ....++++.+||+.++++++|||||||+...+.+++.+++.+|+..+++|||++
T Consensus 237 ~~~-~~v~~vGPl~~~~~~~------~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~ 309 (454)
T 3hbf_A 237 SKF-KLLLNVGPFNLTTPQR------KVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSF 309 (454)
T ss_dssp TTS-SCEEECCCHHHHSCCS------CCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEEC
T ss_pred hcC-CCEEEECCcccccccc------cccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEe
Confidence 776 7999999998644110 123456899999998889999999999998889999999999999999999999
Q ss_pred CCCC-CCCccccccccCCcEEEecccChHHhhccCCcceeEeccCcchHHHHHhhCCcEEeccccccchhhHHHHHHhhc
Q 047833 316 RPPI-GFDINSEIKCSGQGLVVHKWAPQVEILSHRSVSVFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEIG 394 (473)
Q Consensus 316 ~~~~-~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~nA~~v~~~lG 394 (473)
+... +..+++.....++|+++++|+||.++|+|+++++|||||||||++|++++|||||++|+++||+.||+++++.||
T Consensus 310 ~~~~~~~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g 389 (454)
T 3hbf_A 310 RGDPKEKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLE 389 (454)
T ss_dssp CSCHHHHSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSC
T ss_pred CCcchhcCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhC
Confidence 7541 111222112235788999999999999999999999999999999999999999999999999999999998679
Q ss_pred ceEEEecCCCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhcccccccCCcHHHHHHHHHHHHH
Q 047833 395 VCVEVARGKSSEVLKKDIAAKIELVMNETEKGIELRKNAYEVREIIKNAFKNEENFQGSSVKAMNQFLNAAS 466 (473)
Q Consensus 395 ~g~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 466 (473)
+|+.+.. ..++.++|+++|+++|+++ ++++||+||+++++.+++++ .+||||.+++++|++.+.
T Consensus 390 ~Gv~l~~---~~~~~~~l~~av~~ll~~~-~~~~~r~~a~~l~~~~~~a~----~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 390 IGVGVDN---GVLTKESIKKALELTMSSE-KGGIMRQKIVKLKESAFKAV----EQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp SEEECGG---GSCCHHHHHHHHHHHHSSH-HHHHHHHHHHHHHHHHHHHT----STTSHHHHHHHHHHHHHT
T ss_pred eeEEecC---CCCCHHHHHHHHHHHHCCC-hHHHHHHHHHHHHHHHHHhh----ccCCCHHHHHHHHHHHHh
Confidence 9999987 7899999999999999986 78899999999999999999 999999999999999875
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=1.3e-59 Score=472.39 Aligned_cols=439 Identities=27% Similarity=0.458 Sum_probs=318.7
Q ss_pred CCC-CCcEEEEEcCCCccCHHHHHHHHHHHHhCC-CcEEEEEcCCc--chhhhhccCCC-CCCceEEecCCCCCCCCCCC
Q 047833 1 MAQ-RKETIVLFPFMAQGHIIPFLALALHLEKTN-KYTITFVNTPL--NLRKLKSSVPQ-NSSINLLEIPFDSIDHNLPP 75 (473)
Q Consensus 1 ~~~-~~~~il~~~~~~~GH~~p~l~La~~L~~~r-Gh~Vt~~~~~~--~~~~v~~~~~~-~~~~~~~~~~~~~~~~~l~~ 75 (473)
|+. +++||+++|++++||++|++.||++|++ | ||+|||++++. +...+++.... ..+++|..++.. .++.
T Consensus 1 M~~~~~~~vl~~p~p~~GHv~P~l~La~~L~~-r~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~i~~~~l~~~----~~~~ 75 (480)
T 2vch_A 1 MEESKTPHVAIIPSPGMGHLIPLVEFAKRLVH-LHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPV----DLTD 75 (480)
T ss_dssp -----CCEEEEECCSCHHHHHHHHHHHHHHHH-HHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCC----CCTT
T ss_pred CCCCCCcEEEEecCcchhHHHHHHHHHHHHHh-CCCCEEEEEECCCcchhhhhhhhccccCCCceEEEcCCC----CCCC
Confidence 544 4579999999999999999999999999 9 99999999887 34444331100 057899988853 1111
Q ss_pred CCCCCCCCChhhHHHHHHHHHhhhHHHHHHHHhHhhhcCCCCc-cEEEECCCcchHHHHHHHhCCceEEEecchHHHHHH
Q 047833 76 CTENTDSVPYHLVSKLIEATLSFKPHFKKLVNDLIDEQNGYKP-LCIITDMFFGWCKEIAQEYGIFHAIFIGGGGFGFAC 154 (473)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p-D~Vv~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~ 154 (473)
. .. . ......+......+.+.+.+++++... .. ++ ||||+|.++.|+..+|+++|||++.+++++......
T Consensus 76 -~--~~-~-~~~~~~~~~~~~~~~~~l~~ll~~~~~--~~-~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~ 147 (480)
T 2vch_A 76 -L--SS-S-TRIESRISLTVTRSNPELRKVFDSFVE--GG-RLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSF 147 (480)
T ss_dssp -S--CT-T-CCHHHHHHHHHHTTHHHHHHHHHHHHH--TT-CCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHH
T ss_pred -C--CC-c-hhHHHHHHHHHHhhhHHHHHHHHHhcc--CC-CCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHH
Confidence 1 11 1 112233445556667778888877521 12 67 999999999999999999999999999998876655
Q ss_pred Hhhhhc---cCCCCCCC-CCcccCCCCCCCCcCCccccchhhhhcCCCChHHHHHHHHhccccCCcEEEEcCccccchhH
Q 047833 155 YYSLWV---NLPHRNMD-SDECVLPDFPEASTIHATQLADYLRVADGSDSFSAILQKVLPQWMNADGILVNTVEELDKIG 230 (473)
Q Consensus 155 ~~~~~~---~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 230 (473)
+.+.+. ..+..... .....+|+++. +...++...+.. ........+......+.+..++++|++.+|+++.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~Pg~~p---~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~ 222 (480)
T 2vch_A 148 FLHLPKLDETVSCEFRELTEPLMLPGCVP---VAGKDFLDPAQD--RKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNA 222 (480)
T ss_dssp HHHHHHHHHHCCSCGGGCSSCBCCTTCCC---BCGGGSCGGGSC--TTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHH
T ss_pred HHHHHHHHhcCCCcccccCCcccCCCCCC---CChHHCchhhhc--CCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHH
Confidence 543321 11100000 11123455543 444455444322 1123444444455566677888999999999988
Q ss_pred HHHHHhh---cCCCeEEecccCCCccCCCCCCCCCCCchhhHhhhhcCCCCCeEEEEeeCCcccCCHHHHHHHHHHHHhC
Q 047833 231 LMYFKRK---FGRSVWPIGPVLLSTENRGGAGKEYGISTELCKKWLDTKPYTSVLYVSFGSQNTIATSQMMQLAMALEAS 307 (473)
Q Consensus 231 ~~~~~~~---~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~ 307 (473)
+..+.+. + +++++|||+....... .....+.++.+||+.++++++|||||||+...+.+++.+++++|+..
T Consensus 223 ~~~l~~~~~~~-~~v~~vGpl~~~~~~~-----~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~ 296 (480)
T 2vch_A 223 IKALQEPGLDK-PPVYPVGPLVNIGKQE-----AKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADS 296 (480)
T ss_dssp HHHHHSCCTTC-CCEEECCCCCCCSCSC-----C-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHT
T ss_pred HHHHHhcccCC-CcEEEEeccccccccc-----cCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhc
Confidence 8777642 3 6899999998654110 00235678999999987889999999999988889999999999999
Q ss_pred CCceEEEECCCCCCC---------ccccccccCCc---------EEEecccChHHhhccCCcceeEeccCcchHHHHHhh
Q 047833 308 GKNFIWVVRPPIGFD---------INSEIKCSGQG---------LVVHKWAPQVEILSHRSVSVFLSHCGWNSVLEALSH 369 (473)
Q Consensus 308 ~~~~i~~~~~~~~~~---------~~~~~~~~~~n---------v~~~~~vp~~~ll~~~~v~~~I~HGG~gt~~eal~~ 369 (473)
+++|||+++...... ........|+| +++.+|+||.+||+|++|++|||||||||++|++++
T Consensus 297 ~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~ 376 (480)
T 2vch_A 297 EQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVS 376 (480)
T ss_dssp TCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHH
T ss_pred CCcEEEEECCccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHc
Confidence 999999998642000 00011124555 566569999999999999999999999999999999
Q ss_pred CCcEEeccccccchhhHHHHHHhhcceEEEecCCCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhcccccc
Q 047833 370 GVPIIGWPLAAEQFYNSKLLEEEIGVCVEVARGKSSEVLKKDIAAKIELVMNETEKGIELRKNAYEVREIIKNAFKNEEN 449 (473)
Q Consensus 370 GvP~l~~P~~~DQ~~nA~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~l~~~~~~~~~~~~~ 449 (473)
|||||++|+++||+.||+++++.+|+|+.+...+...++.++|+++|+++|+++ ++++||+||+++++++++++ .
T Consensus 377 GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~-~~~~~r~~a~~l~~~~~~a~----~ 451 (480)
T 2vch_A 377 GIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRREEVARVVKGLMEGE-EGKGVRNKMKELKEAACRVL----K 451 (480)
T ss_dssp TCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCCHHHHHHHHHHHHTST-HHHHHHHHHHHHHHHHHHHT----S
T ss_pred CCCEEeccccccchHHHHHHHHHhCeEEEeecccCCccCHHHHHHHHHHHhcCc-chHHHHHHHHHHHHHHHHHH----h
Confidence 999999999999999999974345999999762122799999999999999965 56699999999999999998 8
Q ss_pred cCCcHHHHHHHHHHHHHhh
Q 047833 450 FQGSSVKAMNQFLNAASMV 468 (473)
Q Consensus 450 ~~g~~~~~~~~~~~~~~~~ 468 (473)
+||++.+++++|++.++..
T Consensus 452 ~gGss~~~~~~~v~~~~~~ 470 (480)
T 2vch_A 452 DDGTSTKALSLVALKWKAH 470 (480)
T ss_dssp TTSHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHh
Confidence 9999999999999988763
No 3
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=2e-60 Score=479.99 Aligned_cols=442 Identities=24% Similarity=0.455 Sum_probs=326.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhccCCC-----CCCceEEecCCCCCCCCCCCCCCC
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLRKLKSSVPQ-----NSSINLLEIPFDSIDHNLPPCTEN 79 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~ 79 (473)
++||+++|++++||++|++.||++|++ |||+|||++++.+...+.+.... ..+++|..++. +++.....
T Consensus 8 ~~~vl~~p~p~~GHi~P~l~La~~L~~-rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~-----~lp~~~~~ 81 (482)
T 2pq6_A 8 KPHVVMIPYPVQGHINPLFKLAKLLHL-RGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPD-----GLTPMEGD 81 (482)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHH-TTCEEEEEEEHHHHHHHC------------CEEEEEECC-----CCC-----
T ss_pred CCEEEEecCccchhHHHHHHHHHHHHh-CCCeEEEEeCCchhhhhccccccccccCCCceEEEECCC-----CCCCcccc
Confidence 569999999999999999999999999 99999999999887666543110 03788888872 34431000
Q ss_pred CCCCChhhHHHHHHHH-HhhhHHHHHHHHhHhhhc-CCCCccEEEECCCcchHHHHHHHhCCceEEEecchHHHHHHHhh
Q 047833 80 TDSVPYHLVSKLIEAT-LSFKPHFKKLVNDLIDEQ-NGYKPLCIITDMFFGWCKEIAQEYGIFHAIFIGGGGFGFACYYS 157 (473)
Q Consensus 80 ~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~-~~~~pD~Vv~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~ 157 (473)
. ... ..+..++..+ ..+.+.+.++++++.... .. +|||||+|.++.|+..+|+++|||++.++++++.....+.+
T Consensus 82 ~-~~~-~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~-~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~ 158 (482)
T 2pq6_A 82 G-DVS-QDVPTLCQSVRKNFLKPYCELLTRLNHSTNVP-PVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMH 158 (482)
T ss_dssp ------CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSC-CCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTT
T ss_pred c-Ccc-hhHHHHHHHHHHHhhHHHHHHHHHHhhhccCC-CceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHH
Confidence 0 001 1223344444 556667777777653110 12 79999999999999999999999999999988876555432
Q ss_pred h-----hccCCCCCCC------CCc--ccCCCCCCCCcCCccccchhhhhcCCCChHHHHHHHHhccccCCcEEEEcCcc
Q 047833 158 L-----WVNLPHRNMD------SDE--CVLPDFPEASTIHATQLADYLRVADGSDSFSAILQKVLPQWMNADGILVNTVE 224 (473)
Q Consensus 158 ~-----~~~~p~~~~~------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (473)
. ..+.|..... .+. ..+|+++. ++..++..++............+....+...+.+.+++||++
T Consensus 159 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~ 235 (482)
T 2pq6_A 159 FRSFVERGIIPFKDESYLTNGCLETKVDWIPGLKN---FRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFN 235 (482)
T ss_dssp HHHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCS---CBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCG
T ss_pred HHHHHhcCCCCCccccccccccccCccccCCCCCC---CchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChH
Confidence 2 2244432111 011 12344443 444555554433322344555555566677788999999999
Q ss_pred ccchhHHHHHHhhcCCCeEEecccCCC-ccCC-----CCCCCCCCCchhhHhhhhcCCCCCeEEEEeeCCcccCCHHHHH
Q 047833 225 ELDKIGLMYFKRKFGRSVWPIGPVLLS-TENR-----GGAGKEYGISTELCKKWLDTKPYTSVLYVSFGSQNTIATSQMM 298 (473)
Q Consensus 225 ~l~~~~~~~~~~~~~~~~~~vGp~~~~-~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~~~~~~~~ 298 (473)
+||+++++.+++.+ +++++|||++.. .... .......+..+.++.+||+.++++++|||||||+...+.+++.
T Consensus 236 ~le~~~~~~~~~~~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~ 314 (482)
T 2pq6_A 236 ELESDVINALSSTI-PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLL 314 (482)
T ss_dssp GGGHHHHHHHHTTC-TTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHH
T ss_pred HHhHHHHHHHHHhC-CcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHH
Confidence 99999999988887 899999999763 2110 0000001123456899999987889999999999888888899
Q ss_pred HHHHHHHhCCCceEEEECCCC--CC---CccccccccCCcEEEecccChHHhhccCCcceeEeccCcchHHHHHhhCCcE
Q 047833 299 QLAMALEASGKNFIWVVRPPI--GF---DINSEIKCSGQGLVVHKWAPQVEILSHRSVSVFLSHCGWNSVLEALSHGVPI 373 (473)
Q Consensus 299 ~~~~al~~~~~~~i~~~~~~~--~~---~~~~~~~~~~~nv~~~~~vp~~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~ 373 (473)
+++.+|+..+.+|||+++.+. +. .+++.....++|+++++|+||.++|+|+++++||||||+||++|++++||||
T Consensus 315 ~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~ 394 (482)
T 2pq6_A 315 EFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPM 394 (482)
T ss_dssp HHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCE
T ss_pred HHHHHHHhcCCcEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCE
Confidence 999999999999999997431 00 1222111236799999999999999999999999999999999999999999
Q ss_pred EeccccccchhhHHHHHHhhcceEEEecCCCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhcccccccCCc
Q 047833 374 IGWPLAAEQFYNSKLLEEEIGVCVEVARGKSSEVLKKDIAAKIELVMNETEKGIELRKNAYEVREIIKNAFKNEENFQGS 453 (473)
Q Consensus 374 l~~P~~~DQ~~nA~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~g~ 453 (473)
|++|+++||+.||+++++.+|+|+.+.. .++.++|.++|+++|+|+ ++++||+||+++++.+++++ .+|||
T Consensus 395 i~~P~~~dQ~~na~~~~~~~G~g~~l~~----~~~~~~l~~~i~~ll~~~-~~~~~r~~a~~l~~~~~~a~----~~gGs 465 (482)
T 2pq6_A 395 LCWPFFADQPTDCRFICNEWEIGMEIDT----NVKREELAKLINEVIAGD-KGKKMKQKAMELKKKAEENT----RPGGC 465 (482)
T ss_dssp EECCCSTTHHHHHHHHHHTSCCEEECCS----SCCHHHHHHHHHHHHTSH-HHHHHHHHHHHHHHHHHHHT----STTCH
T ss_pred EecCcccchHHHHHHHHHHhCEEEEECC----CCCHHHHHHHHHHHHcCC-cHHHHHHHHHHHHHHHHHHH----hcCCc
Confidence 9999999999999999744499999864 699999999999999998 57789999999999999999 99999
Q ss_pred HHHHHHHHHHHHHhh
Q 047833 454 SVKAMNQFLNAASMV 468 (473)
Q Consensus 454 ~~~~~~~~~~~~~~~ 468 (473)
+.+++++|++.++..
T Consensus 466 s~~~l~~~v~~~~~~ 480 (482)
T 2pq6_A 466 SYMNLNKVIKDVLLK 480 (482)
T ss_dssp HHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999988654
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=7.2e-59 Score=464.02 Aligned_cols=435 Identities=23% Similarity=0.378 Sum_probs=318.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCc--EEEEEcCCcchhhhhccCCC--CCCceEEecCCCCCCCCCCCCCCC
Q 047833 4 RKETIVLFPFMAQGHIIPFLALALHLEKTNKY--TITFVNTPLNLRKLKSSVPQ--NSSINLLEIPFDSIDHNLPPCTEN 79 (473)
Q Consensus 4 ~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh--~Vt~~~~~~~~~~v~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~ 79 (473)
++.||+++|+|++||++|++.||+.|++ ||| .||+++++...+.+.+...+ ..+++|..++ ++++.+.+.
T Consensus 6 ~~~hvv~~p~p~~GHi~P~l~la~~L~~-rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~-----~glp~~~~~ 79 (456)
T 2c1x_A 6 TNPHVAVLAFPFSTHAAPLLAVVRRLAA-AAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDIS-----DGVPEGYVF 79 (456)
T ss_dssp -CCEEEEECCCSSSSHHHHHHHHHHHHH-HCTTSEEEEEECHHHHHHHC-------CTTEEEEECC-----CCCCTTCCC
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHh-CCCCeEEEEEeCchhHHHhhccccccCCCceEEEeCC-----CCCCCcccc
Confidence 4679999999999999999999999999 865 56888887655444332111 0478888876 245544322
Q ss_pred CCCCChhhHHHHHHHHHhhhHHHHHHHHhHhhhcCCCCccEEEECCCcchHHHHHHHhCCceEEEecchHHHHHHHhhhh
Q 047833 80 TDSVPYHLVSKLIEATLSFKPHFKKLVNDLIDEQNGYKPLCIITDMFFGWCKEIAQEYGIFHAIFIGGGGFGFACYYSLW 159 (473)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~ 159 (473)
.. .....+..+.... .+.+.+++++..++... +|||||+|.++.|+..+|+++|||++.++++++.....+.+..
T Consensus 80 ~~-~~~~~~~~~~~~~---~~~~~~~l~~l~~~~~~-~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~ 154 (456)
T 2c1x_A 80 AG-RPQEDIELFTRAA---PESFRQGMVMAVAETGR-PVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYID 154 (456)
T ss_dssp CC-CTTHHHHHHHHHH---HHHHHHHHHHHHHHHTC-CCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHH
T ss_pred cC-ChHHHHHHHHHHh---HHHHHHHHHHHHhccCC-CceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhH
Confidence 11 2222233333333 23344444432211122 7999999999999999999999999999998877654443221
Q ss_pred c-----cCCCC-CCCCCc-ccCCCCCCCCcCCccccchhhhhcCCCChHHHHHHHHhccccCCcEEEEcCccccchhHHH
Q 047833 160 V-----NLPHR-NMDSDE-CVLPDFPEASTIHATQLADYLRVADGSDSFSAILQKVLPQWMNADGILVNTVEELDKIGLM 232 (473)
Q Consensus 160 ~-----~~p~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 232 (473)
. ..+.. ...... ..+|+++. ++..++...+........+...+.+......+.+.+++|++++||+++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~pg~~~---~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~ 231 (456)
T 2c1x_A 155 EIREKIGVSGIQGREDELLNFIPGMSK---VRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTN 231 (456)
T ss_dssp HHHHHHCSSCCTTCTTCBCTTSTTCTT---CBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHH
T ss_pred HHHhccCCcccccccccccccCCCCCc---ccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHH
Confidence 1 11110 000111 23566654 55555554332222223344455555555667889999999999999888
Q ss_pred HHHhhcCCCeEEecccCCCccCCCCCCCCCCCchhhHhhhhcCCCCCeEEEEeeCCcccCCHHHHHHHHHHHHhCCCceE
Q 047833 233 YFKRKFGRSVWPIGPVLLSTENRGGAGKEYGISTELCKKWLDTKPYTSVLYVSFGSQNTIATSQMMQLAMALEASGKNFI 312 (473)
Q Consensus 233 ~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i 312 (473)
.+++.+ +++++|||+....... ....+.++.+||+.++++++|||||||......+++.+++++|+..+++||
T Consensus 232 ~~~~~~-~~~~~vGpl~~~~~~~------~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~l 304 (456)
T 2c1x_A 232 DLKSKL-KTYLNIGPFNLITPPP------VVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFI 304 (456)
T ss_dssp HHHHHS-SCEEECCCHHHHC---------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEE
T ss_pred HHHhcC-CCEEEecCcccCcccc------cccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEE
Confidence 888776 7899999997643110 012235689999998788999999999998888899999999999999999
Q ss_pred EEECCCC-CCCccccccccCCcEEEecccChHHhhccCCcceeEeccCcchHHHHHhhCCcEEeccccccchhhHHHHHH
Q 047833 313 WVVRPPI-GFDINSEIKCSGQGLVVHKWAPQVEILSHRSVSVFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEE 391 (473)
Q Consensus 313 ~~~~~~~-~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~nA~~v~~ 391 (473)
|+++... +..+.+.....++|+++.+|+||.++|+|+++++||||||+||++|++++|||||++|++.||+.||+++++
T Consensus 305 w~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~ 384 (456)
T 2c1x_A 305 WSLRDKARVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVED 384 (456)
T ss_dssp EECCGGGGGGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH
T ss_pred EEECCcchhhCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHH
Confidence 9997541 011222111235789999999999999999999999999999999999999999999999999999999998
Q ss_pred hhcceEEEecCCCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhcccccccCCcHHHHHHHHHHHHHh
Q 047833 392 EIGVCVEVARGKSSEVLKKDIAAKIELVMNETEKGIELRKNAYEVREIIKNAFKNEENFQGSSVKAMNQFLNAASM 467 (473)
Q Consensus 392 ~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 467 (473)
.||+|+.+.. ..++.++|+++|+++|+|+ ++++||+||+++++.+++++ .+||||.+++++|++.++.
T Consensus 385 ~~g~g~~l~~---~~~~~~~l~~~i~~ll~~~-~~~~~r~~a~~l~~~~~~a~----~~gGsS~~~l~~~v~~~~~ 452 (456)
T 2c1x_A 385 VLEIGVRIEG---GVFTKSGLMSCFDQILSQE-KGKKLRENLRALRETADRAV----GPKGSSTENFITLVDLVSK 452 (456)
T ss_dssp TSCCEEECGG---GSCCHHHHHHHHHHHHHSH-HHHHHHHHHHHHHHHHHHHT----STTCHHHHHHHHHHHHHTS
T ss_pred HhCeEEEecC---CCcCHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHHHHHhh----hcCCcHHHHHHHHHHHHHh
Confidence 8899999987 7899999999999999997 58899999999999999999 9999999999999998864
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=1.2e-57 Score=456.31 Aligned_cols=429 Identities=25% Similarity=0.390 Sum_probs=321.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCC--CcEEEEEcCCcch-----hhhhc--cCCCCCCceEEecCCCCCCCCCCC
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLEKTN--KYTITFVNTPLNL-----RKLKS--SVPQNSSINLLEIPFDSIDHNLPP 75 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~~~r--Gh~Vt~~~~~~~~-----~~v~~--~~~~~~~~~~~~~~~~~~~~~l~~ 75 (473)
++||+++|+|++||++|++.||+.|++ + ||+|||++++.+. ..+.+ ... .+++|..+|.. .++.
T Consensus 9 ~~~vv~~p~p~~GHi~P~l~La~~L~~-r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~--~~i~~~~lp~~----~~~~ 81 (463)
T 2acv_A 9 NSELIFIPAPGIGHLASALEFAKLLTN-HDKNLYITVFCIKFPGMPFADSYIKSVLASQ--PQIQLIDLPEV----EPPP 81 (463)
T ss_dssp CEEEEEECCSSTTTHHHHHHHHHHHHH-TCTTEEEEEEECCCTTCCCCHHHHHHHHCSC--TTEEEEECCCC----CCCC
T ss_pred CCEEEEEcCcccchHHHHHHHHHHHHh-cCCCcEEEEEEcCCcchhhhhhhhhhcccCC--CCceEEECCCC----CCCc
Confidence 579999999999999999999999999 9 9999999988753 22222 111 57899998843 1221
Q ss_pred CCCCCCCCChhhHHHHHHHHHhhhHHHHHHHHhHhhhcCCCCccEEEECCCcchHHHHHHHhCCceEEEecchHHHHHHH
Q 047833 76 CTENTDSVPYHLVSKLIEATLSFKPHFKKLVNDLIDEQNGYKPLCIITDMFFGWCKEIAQEYGIFHAIFIGGGGFGFACY 155 (473)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~ 155 (473)
.+... .... . +...+..+.+.+++++++.. .. +|||||+|.++.|+..+|+++|||++.+++++......+
T Consensus 82 -~~~~~--~~~~-~-~~~~~~~~~~~~~~ll~~~~---~~-~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~ 152 (463)
T 2acv_A 82 -QELLK--SPEF-Y-ILTFLESLIPHVKATIKTIL---SN-KVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLM 152 (463)
T ss_dssp -GGGGG--SHHH-H-HHHHHHHTHHHHHHHHHHHC---CT-TEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHH
T ss_pred -ccccC--CccH-H-HHHHHHhhhHHHHHHHHhcc---CC-CCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHH
Confidence 10001 1111 2 55555667778888888731 11 799999999999999999999999999999888876666
Q ss_pred hhhhccCCC-CCCC-CC---cccCCCC-CCCCcCCccccchhhhhcCCCChHHHHHHHHhccccCCcEEEEcCccccchh
Q 047833 156 YSLWVNLPH-RNMD-SD---ECVLPDF-PEASTIHATQLADYLRVADGSDSFSAILQKVLPQWMNADGILVNTVEELDKI 229 (473)
Q Consensus 156 ~~~~~~~p~-~~~~-~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 229 (473)
++.+..... .... .. ...+|++ +. +...++...+... ......+.+.........++++||+++|+++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~---~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~ 226 (463)
T 2acv_A 153 LSLKNRQIEEVFDDSDRDHQLLNIPGISNQ---VPSNVLPDACFNK---DGGYIAYYKLAERFRDTKGIIVNTFSDLEQS 226 (463)
T ss_dssp HHGGGSCTTCCCCCSSGGGCEECCTTCSSC---EEGGGSCHHHHCT---TTHHHHHHHHHHHHTTSSEEEESCCHHHHHH
T ss_pred HHHHhhcccCCCCCccccCceeECCCCCCC---CChHHCchhhcCC---chHHHHHHHHHHhcccCCEEEECCHHHHhHH
Confidence 544332100 0001 11 2345555 33 4444454433322 2244444455556677888999999999999
Q ss_pred HHHHHHhhc--CCCeEEecccCCCcc-CCCCCCCCCCCchhhHhhhhcCCCCCeEEEEeeCCcc-cCCHHHHHHHHHHHH
Q 047833 230 GLMYFKRKF--GRSVWPIGPVLLSTE-NRGGAGKEYGISTELCKKWLDTKPYTSVLYVSFGSQN-TIATSQMMQLAMALE 305 (473)
Q Consensus 230 ~~~~~~~~~--~~~~~~vGp~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~-~~~~~~~~~~~~al~ 305 (473)
.++.+.+.. ++++++|||+..... ... ...+..+.++.+||+.++++++|||||||+. ....+++.+++++|+
T Consensus 227 ~~~~l~~~~~p~~~v~~vGpl~~~~~~~~~---~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~ 303 (463)
T 2acv_A 227 SIDALYDHDEKIPPIYAVGPLLDLKGQPNP---KLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLK 303 (463)
T ss_dssp HHHHHHHHCTTSCCEEECCCCCCSSCCCBT---TBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHH
T ss_pred HHHHHHhccccCCcEEEeCCCccccccccc---ccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHH
Confidence 888877755 579999999986541 000 0001345789999999888899999999999 778888999999999
Q ss_pred hCCCceEEEECCCCCCCccc-ccccc-CCcEEEecccChHHhhccCCcceeEeccCcchHHHHHhhCCcEEeccccccch
Q 047833 306 ASGKNFIWVVRPPIGFDINS-EIKCS-GQGLVVHKWAPQVEILSHRSVSVFLSHCGWNSVLEALSHGVPIIGWPLAAEQF 383 (473)
Q Consensus 306 ~~~~~~i~~~~~~~~~~~~~-~~~~~-~~nv~~~~~vp~~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~ 383 (473)
..+++|||+++.+.+..+++ ..... ++|+++.+|+||.++|+|+++++||||||+||++|++++|||||++|+++||+
T Consensus 304 ~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~ 383 (463)
T 2acv_A 304 HSGVRFLWSNSAEKKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQ 383 (463)
T ss_dssp HHTCEEEEECCCCGGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHH
T ss_pred hCCCcEEEEECCCcccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhH
Confidence 99999999997530012222 21210 56888889999999999999999999999999999999999999999999999
Q ss_pred hhHHHH-HHhhcceEEE-ecCCCC--ccCHHHHHHHHHHHHc-CChhhHHHHHHHHHHHHHHHHhcccccccCCcHHHHH
Q 047833 384 YNSKLL-EEEIGVCVEV-ARGKSS--EVLKKDIAAKIELVMN-ETEKGIELRKNAYEVREIIKNAFKNEENFQGSSVKAM 458 (473)
Q Consensus 384 ~nA~~v-~~~lG~g~~l-~~~~~~--~~~~~~l~~~i~~ll~-~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~g~~~~~~ 458 (473)
.||+++ ++. |+|+.+ ..++.. .++.++|.++|+++|+ ++ +||+||+++++.+++++ .+||||.+++
T Consensus 384 ~Na~~lv~~~-g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~----~~r~~a~~l~~~~~~a~----~~gGss~~~l 454 (463)
T 2acv_A 384 LNAFRLVKEW-GVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDS----IVHKKVQEMKEMSRNAV----VDGGSSLISV 454 (463)
T ss_dssp HHHHHHHHTS-CCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTC----THHHHHHHHHHHHHHHT----STTSHHHHHH
T ss_pred HHHHHHHHHc-CeEEEEecccCCCCccccHHHHHHHHHHHHhccH----HHHHHHHHHHHHHHHHH----hcCCcHHHHH
Confidence 999995 655 999999 311114 6899999999999997 35 79999999999999998 8999999999
Q ss_pred HHHHHHHHh
Q 047833 459 NQFLNAASM 467 (473)
Q Consensus 459 ~~~~~~~~~ 467 (473)
++|++.+++
T Consensus 455 ~~~v~~~~~ 463 (463)
T 2acv_A 455 GKLIDDITG 463 (463)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHhcC
Confidence 999998853
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=7.3e-45 Score=362.20 Aligned_cols=400 Identities=17% Similarity=0.189 Sum_probs=274.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhccCCCCCCceEEecCCCCCCCCCCCCCCC---C
Q 047833 4 RKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLRKLKSSVPQNSSINLLEIPFDSIDHNLPPCTEN---T 80 (473)
Q Consensus 4 ~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~ 80 (473)
.|+||++++++++||++|++.||++|++ +||+|+|++++.+.+.++. .+++|..++.. ++.+... .
T Consensus 11 ~~~~Il~~~~~~~GHv~p~l~la~~L~~-~Gh~V~~~~~~~~~~~~~~-----~g~~~~~~~~~-----~~~~~~~~~~~ 79 (424)
T 2iya_A 11 TPRHISFFNIPGHGHVNPSLGIVQELVA-RGHRVSYAITDEFAAQVKA-----AGATPVVYDSI-----LPKESNPEESW 79 (424)
T ss_dssp CCCEEEEECCSCHHHHHHHHHHHHHHHH-TTCEEEEEECGGGHHHHHH-----HTCEEEECCCC-----SCCTTCTTCCC
T ss_pred ccceEEEEeCCCCcccchHHHHHHHHHH-CCCeEEEEeCHHHHHHHHh-----CCCEEEecCcc-----ccccccchhhc
Confidence 3679999999999999999999999999 9999999999999888888 67788877732 2221111 0
Q ss_pred CCCChhhHHHHHHHHHhhhHHHHHHHHhHhhhcCCCCccEEEECCCcchHHHHHHHhCCceEEEecchHHHHHHHhhhhc
Q 047833 81 DSVPYHLVSKLIEATLSFKPHFKKLVNDLIDEQNGYKPLCIITDMFFGWCKEIAQEYGIFHAIFIGGGGFGFACYYSLWV 160 (473)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~ 160 (473)
.......+..+......+.+.+.+++++. +||+||+|.+..|+..+|+.+|||++.+++.+.........+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-------~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~ 152 (424)
T 2iya_A 80 PEDQESAMGLFLDEAVRVLPQLEDAYADD-------RPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPA 152 (424)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHHTTTS-------CCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGG
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhcc-------CCCEEEEcCcccHHHHHHHhcCCCEEEEeccccccccccccccc
Confidence 10001112233333344556666666666 89999999988889999999999999998765311110000000
Q ss_pred cCCCCCCCCCcccCC-CCCCCCcCCcc-ccchhhhhcCCCChHHHHHHHH------hccccCCcEEEEcCccccchhHHH
Q 047833 161 NLPHRNMDSDECVLP-DFPEASTIHAT-QLADYLRVADGSDSFSAILQKV------LPQWMNADGILVNTVEELDKIGLM 232 (473)
Q Consensus 161 ~~p~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~~~~ 232 (473)
+.+...........| ........... .....+. ..+.+...+. .......+.+++++.++++++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~--- 224 (424)
T 2iya_A 153 VQDPTADRGEEAAAPAGTGDAEEGAEAEDGLVRFF-----TRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIK--- 224 (424)
T ss_dssp GSCCCC---------------------HHHHHHHH-----HHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTT---
T ss_pred ccccccccccccccccccccchhhhccchhHHHHH-----HHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCC---
Confidence 000000000000000 00000000000 0000000 0011111110 001113566888999888865
Q ss_pred HHHhhcCCCeEEecccCCCccCCCCCCCCCCCchhhHhhhhcCCCCCeEEEEeeCCcccCCHHHHHHHHHHHHhCCCceE
Q 047833 233 YFKRKFGRSVWPIGPVLLSTENRGGAGKEYGISTELCKKWLDTKPYTSVLYVSFGSQNTIATSQMMQLAMALEASGKNFI 312 (473)
Q Consensus 233 ~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i 312 (473)
...+++++++|||+.... ....+|++..+++++|||++||......+.+..++++++..+.+++
T Consensus 225 --~~~~~~~~~~vGp~~~~~--------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~ 288 (424)
T 2iya_A 225 --GDTVGDNYTFVGPTYGDR--------------SHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVV 288 (424)
T ss_dssp --GGGCCTTEEECCCCCCCC--------------GGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEE
T ss_pred --ccCCCCCEEEeCCCCCCc--------------ccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEE
Confidence 256778999999976432 0123577655567899999999986667888899999988889999
Q ss_pred EEECCCCCCCccccccccCCcEEEecccChHHhhccCCcceeEeccCcchHHHHHhhCCcEEeccccccchhhHHHHHHh
Q 047833 313 WVVRPPIGFDINSEIKCSGQGLVVHKWAPQVEILSHRSVSVFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEE 392 (473)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~nA~~v~~~ 392 (473)
|++|... +.. .....++|+.+.+|+||.++|++++ +||||||+||++||+++|||+|++|...||+.||+++++.
T Consensus 289 ~~~g~~~--~~~-~~~~~~~~v~~~~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~ 363 (424)
T 2iya_A 289 LSVGRFV--DPA-DLGEVPPNVEVHQWVPQLDILTKAS--AFITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVEL 363 (424)
T ss_dssp EECCTTS--CGG-GGCSCCTTEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHT
T ss_pred EEECCcC--ChH-HhccCCCCeEEecCCCHHHHHhhCC--EEEECCchhHHHHHHHcCCCEEEecCccchHHHHHHHHHC
Confidence 9987541 111 1123578999999999999999988 5999999999999999999999999999999999999976
Q ss_pred hcceEEEecCCCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhcccccccCCcHHHHHHHHHHHHH
Q 047833 393 IGVCVEVARGKSSEVLKKDIAAKIELVMNETEKGIELRKNAYEVREIIKNAFKNEENFQGSSVKAMNQFLNAAS 466 (473)
Q Consensus 393 lG~g~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 466 (473)
|+|+.+.. .+++.++|.++|+++|+|+ +++++++++++.++ ..+| ..++++.+++.++
T Consensus 364 -g~g~~~~~---~~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~-------~~~~-~~~~~~~i~~~~~ 421 (424)
T 2iya_A 364 -GLGRHIPR---DQVTAEKLREAVLAVASDP----GVAERLAAVRQEIR-------EAGG-ARAAADILEGILA 421 (424)
T ss_dssp -TSEEECCG---GGCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHH-------TSCH-HHHHHHHHHHHHH
T ss_pred -CCEEEcCc---CCCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHH-------hcCc-HHHHHHHHHHHHh
Confidence 99999987 6899999999999999999 89999999999997 3344 7777777776654
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=1.1e-44 Score=358.19 Aligned_cols=365 Identities=13% Similarity=0.150 Sum_probs=240.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhccCCCCCCceEEecCCCCCCCC--CCCCCC---
Q 047833 4 RKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLRKLKSSVPQNSSINLLEIPFDSIDHN--LPPCTE--- 78 (473)
Q Consensus 4 ~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~--- 78 (473)
+.|||||+++|++||++|+++||++|++ |||+|||++++.+... .. .++.+..+........ .+....
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~-rGh~Vt~~t~~~~~~~-~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRA-LGHEVRYATGGDIRAV-AE-----AGLCAVDVSPGVNYAKLFVPDDTDVTD 93 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHH-TTCEEEEEECSSTHHH-HT-----TTCEEEESSTTCCSHHHHSCCC-----
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHH-CCCEEEEEeCcchhhH-Hh-----cCCeeEecCCchhHhhhcccccccccc
Confidence 4679999999999999999999999999 9999999999887664 34 4556666543211100 000000
Q ss_pred ---CCCCCChhhHHHHHHHHHhhhHHHHHHHHhHhhhcCCCCccEEEECCCcchHHHHHHHhCCceEEEecchHHHHHHH
Q 047833 79 ---NTDSVPYHLVSKLIEATLSFKPHFKKLVNDLIDEQNGYKPLCIITDMFFGWCKEIAQEYGIFHAIFIGGGGFGFACY 155 (473)
Q Consensus 79 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~ 155 (473)
............+..........+.++++++ +||+||+|.+++++..+|+.+|||++.+...+.......
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~ 166 (400)
T 4amg_A 94 PMHSEGLGEGFFAEMFARVSAVAVDGALRTARSW-------RPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGL 166 (400)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHHHHHH-------CCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHH
T ss_pred ccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhc-------CCCEEEECcchHHHHHHHHHcCCCceeecccccccccch
Confidence 0000111111223333345566777888888 999999999999999999999999998755432211111
Q ss_pred hhhhccCCCCCCCCCcccCCCCCCCCcCCccccchhhhhcCCCChHHHHHHHHhccccCCcEEEEcCccccchhHHHHHH
Q 047833 156 YSLWVNLPHRNMDSDECVLPDFPEASTIHATQLADYLRVADGSDSFSAILQKVLPQWMNADGILVNTVEELDKIGLMYFK 235 (473)
Q Consensus 156 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 235 (473)
... .. ..+.....+................ ++......
T Consensus 167 ~~~---------------------------------~~-----~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 204 (400)
T 4amg_A 167 GAL---------------------------------IR-----RAMSKDYERHGVTGEPTGSVRLTTT----PPSVEALL 204 (400)
T ss_dssp HHH---------------------------------HH-----HHTHHHHHHTTCCCCCSCEEEEECC----CHHHHHTS
T ss_pred hhH---------------------------------HH-----HHHHHHHHHhCCCcccccchhhccc----CchhhccC
Confidence 100 00 0001111111111111111111111 11111100
Q ss_pred h--hcCCCeEEecccCCCccCCCCCCCCCCCchhhHhhhhcCCCCCeEEEEeeCCcccCC--HHHHHHHHHHHHhCCCce
Q 047833 236 R--KFGRSVWPIGPVLLSTENRGGAGKEYGISTELCKKWLDTKPYTSVLYVSFGSQNTIA--TSQMMQLAMALEASGKNF 311 (473)
Q Consensus 236 ~--~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~~~--~~~~~~~~~al~~~~~~~ 311 (473)
. ...+....+++.... ....+.+|++..+++++|||||||+.... .+.+..+++++...+.++
T Consensus 205 ~~~~~~~~~~~~~~~~~~-------------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~ 271 (400)
T 4amg_A 205 PEDRRSPGAWPMRYVPYN-------------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEF 271 (400)
T ss_dssp CGGGCCTTCEECCCCCCC-------------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEE
T ss_pred cccccCCcccCccccccc-------------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceE
Confidence 0 111233333332222 22344568888888999999999987643 467888999999999999
Q ss_pred EEEECCCCCCCccccccccCCcEEEecccChHHhhccCCcceeEeccCcchHHHHHhhCCcEEeccccccchhhHHHHHH
Q 047833 312 IWVVRPPIGFDINSEIKCSGQGLVVHKWAPQVEILSHRSVSVFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEE 391 (473)
Q Consensus 312 i~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~nA~~v~~ 391 (473)
||..+... . ......++|+.+.+|+||.++|+|++ +||||||+||++||+++|||+|++|+++||+.||+++++
T Consensus 272 v~~~~~~~---~-~~~~~~~~~v~~~~~~p~~~lL~~~~--~~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~ 345 (400)
T 4amg_A 272 VLTLGGGD---L-ALLGELPANVRVVEWIPLGALLETCD--AIIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTG 345 (400)
T ss_dssp EEECCTTC---C-CCCCCCCTTEEEECCCCHHHHHTTCS--EEEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHH
T ss_pred EEEecCcc---c-cccccCCCCEEEEeecCHHHHhhhhh--heeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHH
Confidence 99987541 1 12345689999999999999999977 599999999999999999999999999999999999997
Q ss_pred hhcceEEEecCCCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhcccccccCCcHHHHHHHHHH
Q 047833 392 EIGVCVEVARGKSSEVLKKDIAAKIELVMNETEKGIELRKNAYEVREIIKNAFKNEENFQGSSVKAMNQFLN 463 (473)
Q Consensus 392 ~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~ 463 (473)
. |+|+.++. .+.+++ +|+++|+|+ +||+||++++++++ ...| ..++++.|++
T Consensus 346 ~-G~g~~l~~---~~~~~~----al~~lL~d~----~~r~~a~~l~~~~~-------~~~~-~~~~a~~le~ 397 (400)
T 4amg_A 346 L-GIGFDAEA---GSLGAE----QCRRLLDDA----GLREAALRVRQEMS-------EMPP-PAETAAXLVA 397 (400)
T ss_dssp H-TSEEECCT---TTCSHH----HHHHHHHCH----HHHHHHHHHHHHHH-------TSCC-HHHHHHHHHH
T ss_pred C-CCEEEcCC---CCchHH----HHHHHHcCH----HHHHHHHHHHHHHH-------cCCC-HHHHHHHHHH
Confidence 7 99999987 667654 678899999 89999999999997 3354 5666666654
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=6.3e-43 Score=347.00 Aligned_cols=383 Identities=14% Similarity=0.100 Sum_probs=256.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhccCCCCCCceEEecCCCCCCCCCCCCCCCCCCCCh
Q 047833 6 ETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLRKLKSSVPQNSSINLLEIPFDSIDHNLPPCTENTDSVPY 85 (473)
Q Consensus 6 ~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 85 (473)
+||+|+++++.||++|+++||++|++ +||+|+|++++.+.+.+.. .+++|..++.... +.+ ........
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~-~Gh~V~~~~~~~~~~~v~~-----~g~~~~~i~~~~~-~~~----~~~~~~~~ 69 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRD-LGADVRMCAPPDCAERLAE-----VGVPHVPVGPSAR-API----QRAKPLTA 69 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHH-TTCEEEEEECGGGHHHHHH-----TTCCEEECCC------------CCSCCCH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHH-CCCeEEEEcCHHHHHHHHH-----cCCeeeeCCCCHH-HHh----hcccccch
Confidence 48999999999999999999999999 9999999999998877887 7788998885310 111 11011111
Q ss_pred hhHHHHHHHHHhhhHHHHHHHH-hHhhhcCCCCccEEEECC-Ccch--HHHHHHHhCCceEEEecchHHHHHHHhhhhcc
Q 047833 86 HLVSKLIEATLSFKPHFKKLVN-DLIDEQNGYKPLCIITDM-FFGW--CKEIAQEYGIFHAIFIGGGGFGFACYYSLWVN 161 (473)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~pD~Vv~d~-~~~~--~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~ 161 (473)
..+..+... .....+.++.+ .. +||+||+|. +..+ +..+|+.+|||++.+.+.+... +..+
T Consensus 70 ~~~~~~~~~--~~~~~~~~l~~~~~-------~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~------~~~~ 134 (415)
T 1iir_A 70 EDVRRFTTE--AIATQFDEIPAAAE-------GCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYV------PSPY 134 (415)
T ss_dssp HHHHHHHHH--HHHHHHHHHHHHTT-------TCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGS------CCSS
T ss_pred HHHHHHHHH--HHHHHHHHHHHHhc-------CCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcC------CCcc
Confidence 111111111 11122233332 23 899999997 6667 8899999999999998765432 1112
Q ss_pred CCCCCCCCCcccCCCCCCCCcCCccccchhhhhcCC---CChHHHHHHHHh---------ccccCCcEEEEcCccccch-
Q 047833 162 LPHRNMDSDECVLPDFPEASTIHATQLADYLRVADG---SDSFSAILQKVL---------PQWMNADGILVNTVEELDK- 228 (473)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~l~~- 228 (473)
+|..... ..+++. .....+...+..... .....+.+.... +..... ..+.++.+.+++
T Consensus 135 ~p~~~~~---~~~~~~-----~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~ 205 (415)
T 1iir_A 135 YPPPPLG---EPSTQD-----TIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPL 205 (415)
T ss_dssp SCCCC-----------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCC
T ss_pred cCCccCC---ccccch-----HHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcCC
Confidence 2211110 011110 000001000000000 000000011000 001122 578888888875
Q ss_pred hHHHHHHhhcCCCeEEecccCCCccCCCCCCCCCCCchhhHhhhhcCCCCCeEEEEeeCCcccCCHHHHHHHHHHHHhCC
Q 047833 229 IGLMYFKRKFGRSVWPIGPVLLSTENRGGAGKEYGISTELCKKWLDTKPYTSVLYVSFGSQNTIATSQMMQLAMALEASG 308 (473)
Q Consensus 229 ~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~ 308 (473)
+ +..+ ++++|||+.... .+..+.++.+|++.+ +++|||++||+. ...+.+..++++++..+
T Consensus 206 ~-----~~~~--~~~~vG~~~~~~---------~~~~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~ 266 (415)
T 1iir_A 206 Q-----PTDL--DAVQTGAWILPD---------ERPLSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDAIRAHG 266 (415)
T ss_dssp C-----CCSS--CCEECCCCCCCC---------CCCCCHHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHHHHHTT
T ss_pred C-----cccC--CeEeeCCCccCc---------ccCCCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHHHHHHCC
Confidence 3 1223 789999998654 123567889999765 468999999997 56778888999999999
Q ss_pred CceEEEECCCCCCCccccccccCCcEEEecccChHHhhccCCcceeEeccCcchHHHHHhhCCcEEeccccccchhhHHH
Q 047833 309 KNFIWVVRPPIGFDINSEIKCSGQGLVVHKWAPQVEILSHRSVSVFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKL 388 (473)
Q Consensus 309 ~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~nA~~ 388 (473)
.+++|++|... .. ....++|+.+.+|+||.++|+.++ +||||||+||++|++++|||+|++|...||+.||++
T Consensus 267 ~~~v~~~g~~~-~~----~~~~~~~v~~~~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~ 339 (415)
T 1iir_A 267 RRVILSRGWAD-LV----LPDDGADCFAIGEVNHQVLFGRVA--AVIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGR 339 (415)
T ss_dssp CCEEECTTCTT-CC----CSSCGGGEEECSSCCHHHHGGGSS--EEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHH
T ss_pred CeEEEEeCCCc-cc----ccCCCCCEEEeCcCChHHHHhhCC--EEEeCCChhHHHHHHHcCCCEEECCCCCccHHHHHH
Confidence 99999987541 11 123467999999999999997766 699999999999999999999999999999999999
Q ss_pred HHHhhcceEEEecCCCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhcccccccCCcHHHHHHHHHHHHH
Q 047833 389 LEEEIGVCVEVARGKSSEVLKKDIAAKIELVMNETEKGIELRKNAYEVREIIKNAFKNEENFQGSSVKAMNQFLNAAS 466 (473)
Q Consensus 389 v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 466 (473)
+++. |+|+.++. ..++.++|.++|+++ +|+ ++++++++++++++ . .++..++++.+.+.++
T Consensus 340 l~~~-g~g~~~~~---~~~~~~~l~~~i~~l-~~~----~~~~~~~~~~~~~~-------~-~~~~~~~~~~i~~~~~ 400 (415)
T 1iir_A 340 VAEL-GVGVAHDG---PIPTFDSLSAALATA-LTP----ETHARATAVAGTIR-------T-DGAAVAARLLLDAVSR 400 (415)
T ss_dssp HHHH-TSEEECSS---SSCCHHHHHHHHHHH-TSH----HHHHHHHHHHHHSC-------S-CHHHHHHHHHHHHHHT
T ss_pred HHHC-CCcccCCc---CCCCHHHHHHHHHHH-cCH----HHHHHHHHHHHHHh-------h-cChHHHHHHHHHHHHh
Confidence 9977 99999987 678999999999999 888 89999999999885 3 3335666666655544
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=3.4e-42 Score=341.97 Aligned_cols=386 Identities=13% Similarity=0.052 Sum_probs=258.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhccCCCCCCceEEecCCCCCCCCCCCCCCCCCCCCh
Q 047833 6 ETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLRKLKSSVPQNSSINLLEIPFDSIDHNLPPCTENTDSVPY 85 (473)
Q Consensus 6 ~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 85 (473)
+||+++++++.||++|+++||++|++ +||+|+|++++.+.+.++. .+++|..++.... ..+.. . ......
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~-~Gh~V~~~~~~~~~~~v~~-----~g~~~~~~~~~~~-~~~~~-~--~~~~~~ 70 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKA-LGVQTRMCAPPAAEERLAE-----VGVPHVPVGLPQH-MMLQE-G--MPPPPP 70 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHH-TTCEEEEEECGGGHHHHHH-----HTCCEEECSCCGG-GCCCT-T--SCCCCH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHH-CCCeEEEEeCHHHHHHHHH-----cCCeeeecCCCHH-HHHhh-c--cccchh
Confidence 48999999999999999999999999 9999999999988888887 6778888875310 11111 0 111111
Q ss_pred hhHHHHHHHHHhhhHHHHHHHHhHhhhcCCCCccEEEECC-Ccch--HHHHHHHhCCceEEEecchHHHHHHHhhhhccC
Q 047833 86 HLVSKLIEATLSFKPHFKKLVNDLIDEQNGYKPLCIITDM-FFGW--CKEIAQEYGIFHAIFIGGGGFGFACYYSLWVNL 162 (473)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d~-~~~~--~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~ 162 (473)
..+..+ +......+.+.+.+. .. +||+||+|. +.++ +..+|+.+|||++.+.+.+... +..++
T Consensus 71 ~~~~~~---~~~~~~~~~~~l~~~----~~-~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~------~~~~~ 136 (416)
T 1rrv_A 71 EEEQRL---AAMTVEMQFDAVPGA----AE-GCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYL------ASPHL 136 (416)
T ss_dssp HHHHHH---HHHHHHHHHHHHHHH----TT-TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGS------CCSSS
T ss_pred HHHHHH---HHHHHHHHHHHHHHH----hc-CCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCC------CCccc
Confidence 111111 111112222223211 11 899999996 4556 7889999999999987765322 11112
Q ss_pred CCCCCCCCcccC-CCCCCCCcCCccccchhhhhcCCCChHHHHHHHH--------hccccCCcEEEEcCccccchhHHHH
Q 047833 163 PHRNMDSDECVL-PDFPEASTIHATQLADYLRVADGSDSFSAILQKV--------LPQWMNADGILVNTVEELDKIGLMY 233 (473)
Q Consensus 163 p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~~~~~~ 233 (473)
| .... +.+ +++..+ .....+.................... .+..... .+++++.++++++
T Consensus 137 p-~~~~---~~~~~~r~~n--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~---- 205 (416)
T 1rrv_A 137 P-PAYD---EPTTPGVTDI--RVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPL---- 205 (416)
T ss_dssp C-CCBC---SCCCTTCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCC----
T ss_pred C-CCCC---CCCCchHHHH--HHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCC----
Confidence 2 0000 011 110000 00000000000000000000000000 0111223 5788988888754
Q ss_pred HHhhcCCCeEEecccCCCccCCCCCCCCCCCchhhHhhhhcCCCCCeEEEEeeCCccc-CCHHHHHHHHHHHHhCCCceE
Q 047833 234 FKRKFGRSVWPIGPVLLSTENRGGAGKEYGISTELCKKWLDTKPYTSVLYVSFGSQNT-IATSQMMQLAMALEASGKNFI 312 (473)
Q Consensus 234 ~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~-~~~~~~~~~~~al~~~~~~~i 312 (473)
+..+ ++++|||+..+. ....+.++.+|++.+ +++|||++||... ...+.+..++++++..+.+++
T Consensus 206 -~~~~--~~~~vG~~~~~~---------~~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~~v 271 (416)
T 1rrv_A 206 -QPDV--DAVQTGAWLLSD---------ERPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVI 271 (416)
T ss_dssp -CSSC--CCEECCCCCCCC---------CCCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEE
T ss_pred -CCCC--CeeeECCCccCc---------cCCCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHHHHCCCeEE
Confidence 1222 789999998654 123567889999765 4689999999975 345778889999999999999
Q ss_pred EEECCCCCCCccccccccCCcEEEecccChHHhhccCCcceeEeccCcchHHHHHhhCCcEEeccccccchhhHHHHHHh
Q 047833 313 WVVRPPIGFDINSEIKCSGQGLVVHKWAPQVEILSHRSVSVFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEE 392 (473)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~nA~~v~~~ 392 (473)
|++|... .. ....++|+.+.+|+||.++|++++ +||||||+||++||+++|||+|++|...||+.||+++++.
T Consensus 272 ~~~g~~~-~~----~~~~~~~v~~~~~~~~~~ll~~~d--~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~ 344 (416)
T 1rrv_A 272 LSRGWTE-LV----LPDDRDDCFAIDEVNFQALFRRVA--AVIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAAL 344 (416)
T ss_dssp EECTTTT-CC----CSCCCTTEEEESSCCHHHHGGGSS--EEEECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHH
T ss_pred EEeCCcc-cc----ccCCCCCEEEeccCChHHHhccCC--EEEecCChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHC
Confidence 9997541 11 123468999999999999998766 6999999999999999999999999999999999999977
Q ss_pred hcceEEEecCCCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhcccccccCCcHHHHHHHH-HHHH
Q 047833 393 IGVCVEVARGKSSEVLKKDIAAKIELVMNETEKGIELRKNAYEVREIIKNAFKNEENFQGSSVKAMNQF-LNAA 465 (473)
Q Consensus 393 lG~g~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~ 465 (473)
|+|+.++. .+++.++|.++|+++ +|+ +|++++++++++++ ..+| . ++++.+ .+.+
T Consensus 345 -g~g~~~~~---~~~~~~~l~~~i~~l-~~~----~~~~~~~~~~~~~~-------~~~~-~-~~~~~i~e~~~ 400 (416)
T 1rrv_A 345 -GIGVAHDG---PTPTFESLSAALTTV-LAP----ETRARAEAVAGMVL-------TDGA-A-AAADLVLAAVG 400 (416)
T ss_dssp -TSEEECSS---SCCCHHHHHHHHHHH-TSH----HHHHHHHHHTTTCC-------CCHH-H-HHHHHHHHHHH
T ss_pred -CCccCCCC---CCCCHHHHHHHHHHh-hCH----HHHHHHHHHHHHHh-------hcCc-H-HHHHHHHHHHh
Confidence 99999987 689999999999999 988 89999999998885 3344 5 777766 4433
No 10
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=4.3e-42 Score=339.50 Aligned_cols=376 Identities=13% Similarity=0.092 Sum_probs=259.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhccCCCCCCceEEecCCCCCCCCCCCCCCCCCCCCh
Q 047833 6 ETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLRKLKSSVPQNSSINLLEIPFDSIDHNLPPCTENTDSVPY 85 (473)
Q Consensus 6 ~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 85 (473)
+||+|++.++.||++|+++||++|++ +||+|+|++++.+.+.++. .+++|..++.+... + ....... ..
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~-~Gh~V~v~~~~~~~~~v~~-----~g~~~~~l~~~~~~--~-~~~~~~~--~~ 69 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRE-LGADARMCLPPDYVERCAE-----VGVPMVPVGRAVRA--G-AREPGEL--PP 69 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHH-TTCCEEEEECGGGHHHHHH-----TTCCEEECSSCSSG--G-GSCTTCC--CT
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHH-CCCeEEEEeCHHHHHHHHH-----cCCceeecCCCHHH--H-hccccCC--HH
Confidence 47999999999999999999999999 9999999999999999998 77789888754211 1 0000000 00
Q ss_pred hhHHHHHHHHHhhhHHHHHHHHhHhhhcCCCCccEEEECCCcchH---HHHHHHhCCceEEEecchHHHHHHHhhhhccC
Q 047833 86 HLVSKLIEATLSFKPHFKKLVNDLIDEQNGYKPLCIITDMFFGWC---KEIAQEYGIFHAIFIGGGGFGFACYYSLWVNL 162 (473)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~~~---~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~ 162 (473)
.....+...+......+.+++ . +||+||+|..+..+ ..+|+.+|||++.+..++...........
T Consensus 70 ~~~~~~~~~~~~~~~~l~~~~--~-------~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~~~--- 137 (404)
T 3h4t_A 70 GAAEVVTEVVAEWFDKVPAAI--E-------GCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAE--- 137 (404)
T ss_dssp TCGGGHHHHHHHHHHHHHHHH--T-------TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHHH---
T ss_pred HHHHHHHHHHHHHHHHHHHHh--c-------CCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHHHH---
Confidence 111222222222222222222 1 69999998665544 68999999999998876542111000000
Q ss_pred CCCCCCCCcccCCCCCCCCcCCcccc----chhhhhcC--CCChHHHHHHHHhccccCCcEEEEcCccccchhHHHHHHh
Q 047833 163 PHRNMDSDECVLPDFPEASTIHATQL----ADYLRVAD--GSDSFSAILQKVLPQWMNADGILVNTVEELDKIGLMYFKR 236 (473)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 236 (473)
++.... ..+..+ ........ ...... ... .....+.+..+.+.+. .
T Consensus 138 ------------~~~~~~--~~~~~~~~~~~~~~~~lgl~~~~~~~---~~~-----~~~~~l~~~~~~l~p~------~ 189 (404)
T 3h4t_A 138 ------------RDMYNQ--GADRLFGDAVNSHRASIGLPPVEHLY---DYG-----YTDQPWLAADPVLSPL------R 189 (404)
T ss_dssp ------------HHHHHH--HHHHHHHHHHHHHHHHTTCCCCCCHH---HHH-----HCSSCEECSCTTTSCC------C
T ss_pred ------------HHHHHH--HHHHHhHHHHHHHHHHcCCCCCcchh---hcc-----ccCCeEEeeCcceeCC------C
Confidence 000000 000000 00000000 000000 000 0112344555555533 3
Q ss_pred hcCCCeEEecccCCCccCCCCCCCCCCCchhhHhhhhcCCCCCeEEEEeeCCcccCCHHHHHHHHHHHHhCCCceEEEEC
Q 047833 237 KFGRSVWPIGPVLLSTENRGGAGKEYGISTELCKKWLDTKPYTSVLYVSFGSQNTIATSQMMQLAMALEASGKNFIWVVR 316 (473)
Q Consensus 237 ~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~ 316 (473)
.++++++++|++..+. ....++++.+|++.. +++|||++||+.. ..+.+..+++++...+.++||++|
T Consensus 190 ~~~~~~~~~G~~~~~~---------~~~~~~~l~~~l~~~--~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g 257 (404)
T 3h4t_A 190 PTDLGTVQTGAWILPD---------QRPLSAELEGFLRAG--SPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSG 257 (404)
T ss_dssp TTCCSCCBCCCCCCCC---------CCCCCHHHHHHHHTS--SCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECT
T ss_pred CCCCCeEEeCccccCC---------CCCCCHHHHHHHhcC--CCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeC
Confidence 4667889999876543 134678889999754 6799999999987 678888999999999999999997
Q ss_pred CCCCCCccccccccCCcEEEecccChHHhhccCCcceeEeccCcchHHHHHhhCCcEEeccccccchhhHHHHHHhhcce
Q 047833 317 PPIGFDINSEIKCSGQGLVVHKWAPQVEILSHRSVSVFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEIGVC 396 (473)
Q Consensus 317 ~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~nA~~v~~~lG~g 396 (473)
+.. . .....++|+.+.+|+||.++|++++ +||||||+||+.|++++|+|+|++|+..||+.||.++++. |+|
T Consensus 258 ~~~-~----~~~~~~~~v~~~~~~~~~~ll~~~d--~~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~-G~g 329 (404)
T 3h4t_A 258 WAG-L----GRIDEGDDCLVVGEVNHQVLFGRVA--AVVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADL-GVG 329 (404)
T ss_dssp TTT-C----CCSSCCTTEEEESSCCHHHHGGGSS--EEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH-TSE
T ss_pred Ccc-c----ccccCCCCEEEecCCCHHHHHhhCc--EEEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHC-CCE
Confidence 541 1 1223478999999999999998876 6999999999999999999999999999999999999977 999
Q ss_pred EEEecCCCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhcccccccCCcHHHHHHHHHHHHHhhh
Q 047833 397 VEVARGKSSEVLKKDIAAKIELVMNETEKGIELRKNAYEVREIIKNAFKNEENFQGSSVKAMNQFLNAASMVK 469 (473)
Q Consensus 397 ~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 469 (473)
+.+.. .+++.+.|.++|+++++ + +|+++++++++.++ . .+..++++.+++.++..+
T Consensus 330 ~~l~~---~~~~~~~l~~ai~~ll~-~----~~~~~~~~~~~~~~-------~--~~~~~~~~~i~~~~~~~~ 385 (404)
T 3h4t_A 330 VAHDG---PTPTVESLSAALATALT-P----GIRARAAAVAGTIR-------T--DGTTVAAKLLLEAISRQR 385 (404)
T ss_dssp EECSS---SSCCHHHHHHHHHHHTS-H----HHHHHHHHHHTTCC-------C--CHHHHHHHHHHHHHHC--
T ss_pred eccCc---CCCCHHHHHHHHHHHhC-H----HHHHHHHHHHHHHh-------h--hHHHHHHHHHHHHHhhCC
Confidence 99987 78899999999999999 8 89999999999885 4 457888888888776554
No 11
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=3.9e-41 Score=334.38 Aligned_cols=394 Identities=14% Similarity=0.154 Sum_probs=271.5
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhccCCCCCCceEEecCCCCCCCCCCCCCCCCCC
Q 047833 3 QRKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLRKLKSSVPQNSSINLLEIPFDSIDHNLPPCTENTDS 82 (473)
Q Consensus 3 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 82 (473)
.+|+||+|++.++.||++|++.||++|++ +||+|+|++++.+.+.++. .++++..++.+... ..........
T Consensus 18 ~~m~rIl~~~~~~~GHv~p~l~La~~L~~-~Gh~V~v~~~~~~~~~~~~-----~G~~~~~~~~~~~~--~~~~~~~~~~ 89 (415)
T 3rsc_A 18 RHMAHLLIVNVASHGLILPTLTVVTELVR-RGHRVSYVTAGGFAEPVRA-----AGATVVPYQSEIID--ADAAEVFGSD 89 (415)
T ss_dssp -CCCEEEEECCSCHHHHGGGHHHHHHHHH-TTCEEEEEECGGGHHHHHH-----TTCEEEECCCSTTT--CCHHHHHHSS
T ss_pred ccCCEEEEEeCCCccccccHHHHHHHHHH-CCCEEEEEeCHHHHHHHHh-----cCCEEEeccccccc--cccchhhccc
Confidence 45889999999999999999999999999 9999999999999999888 77889888743110 0000000001
Q ss_pred CChhhHHH-HHHHHHhhhHHHHHHHHhHhhhcCCCCccEEEEC-CCcchHHHHHHHhCCceEEEecchHHHHHHHhhhhc
Q 047833 83 VPYHLVSK-LIEATLSFKPHFKKLVNDLIDEQNGYKPLCIITD-MFFGWCKEIAQEYGIFHAIFIGGGGFGFACYYSLWV 160 (473)
Q Consensus 83 ~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d-~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~ 160 (473)
.....+.. +..........+.++++++ +||+||+| ....++..+|+.+|||++.+.+...... .+.....
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~-------~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~-~~~~~~~ 161 (415)
T 3rsc_A 90 DLGVRPHLMYLRENVSVLRATAEALDGD-------VPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNE-HYSFSQD 161 (415)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHSSS-------CCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCS-SCCHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhcc-------CCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccC-ccccccc
Confidence 11112222 3444445556777777777 99999999 7777888999999999999864321100 0000000
Q ss_pred cCCCCCCCCCcccCCCCCCCCcCCccccchhhhhcCCCChHHHHHHHHhccccC-CcEEEEcCccccchhHHHHHHhhcC
Q 047833 161 NLPHRNMDSDECVLPDFPEASTIHATQLADYLRVADGSDSFSAILQKVLPQWMN-ADGILVNTVEELDKIGLMYFKRKFG 239 (473)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~ 239 (473)
..+ ......+.........+...+........... .... .+..+....+.+++ ....++
T Consensus 162 ~~~--------~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~-------~~~~~~~~~l~~~~~~~~~-----~~~~~~ 221 (415)
T 3rsc_A 162 MVT--------LAGTIDPLDLPVFRDTLRDLLAEHGLSRSVVD-------CWNHVEQLNLVFVPKAFQI-----AGDTFD 221 (415)
T ss_dssp HHH--------HHTCCCGGGCHHHHHHHHHHHHHTTCCCCHHH-------HHTCCCSEEEESSCTTTST-----TGGGCC
T ss_pred ccc--------ccccCChhhHHHHHHHHHHHHHHcCCCCChhh-------hhcCCCCeEEEEcCcccCC-----CcccCC
Confidence 000 00000000000000111111111111000000 0111 14455555554543 345677
Q ss_pred CCeEEecccCCCccCCCCCCCCCCCchhhHhhhhcCCCCCeEEEEeeCCcccCCHHHHHHHHHHHHhCCCceEEEECCCC
Q 047833 240 RSVWPIGPVLLSTENRGGAGKEYGISTELCKKWLDTKPYTSVLYVSFGSQNTIATSQMMQLAMALEASGKNFIWVVRPPI 319 (473)
Q Consensus 240 ~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~ 319 (473)
.++.++||+.... .+..+|....+++++|||++||......+.+..+++++...+.+++|.+|.+.
T Consensus 222 ~~~~~vGp~~~~~--------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~ 287 (415)
T 3rsc_A 222 DRFVFVGPCFDDR--------------RFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGGQV 287 (415)
T ss_dssp TTEEECCCCCCCC--------------GGGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECTTTS
T ss_pred CceEEeCCCCCCc--------------ccCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeCCCC
Confidence 8899999986543 12234554445678999999999876778889999999988899999997531
Q ss_pred CCCccccccccCCcEEEecccChHHhhccCCcceeEeccCcchHHHHHhhCCcEEeccccccchhhHHHHHHhhcceEEE
Q 047833 320 GFDINSEIKCSGQGLVVHKWAPQVEILSHRSVSVFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEIGVCVEV 399 (473)
Q Consensus 320 ~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~nA~~v~~~lG~g~~l 399 (473)
+.. .....++|+.+.+|+|+.++|++++ +||||||+||++|++++|+|+|++|...||+.||.++++. |+|+.+
T Consensus 288 --~~~-~l~~~~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~-g~g~~~ 361 (415)
T 3rsc_A 288 --DPA-ALGDLPPNVEAHRWVPHVKVLEQAT--VCVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQL-GLGAVL 361 (415)
T ss_dssp --CGG-GGCCCCTTEEEESCCCHHHHHHHEE--EEEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHH-TCEEEC
T ss_pred --ChH-HhcCCCCcEEEEecCCHHHHHhhCC--EEEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHc-CCEEEc
Confidence 111 2234578999999999999999977 5999999999999999999999999999999999999988 999999
Q ss_pred ecCCCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhcccccccCCcHHHHHHHHHHHHHh
Q 047833 400 ARGKSSEVLKKDIAAKIELVMNETEKGIELRKNAYEVREIIKNAFKNEENFQGSSVKAMNQFLNAASM 467 (473)
Q Consensus 400 ~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 467 (473)
.. .+++.+.|.++|.++|+|+ +++++++++++.+. . .++..++++.+.+.+++
T Consensus 362 ~~---~~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~-------~-~~~~~~~~~~i~~~~~~ 414 (415)
T 3rsc_A 362 PG---EKADGDTLLAAVGAVAADP----ALLARVEAMRGHVR-------R-AGGAARAADAVEAYLAR 414 (415)
T ss_dssp CG---GGCCHHHHHHHHHHHHTCH----HHHHHHHHHHHHHH-------H-SCHHHHHHHHHHHHHHH
T ss_pred cc---CCCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHH-------h-cCHHHHHHHHHHHHhhc
Confidence 87 7889999999999999999 89999999999996 3 34478888888877653
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=4e-40 Score=325.64 Aligned_cols=394 Identities=18% Similarity=0.207 Sum_probs=269.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhccCCCCCCceEEecCCCCCCCCCCCCCCCCCCCC
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLRKLKSSVPQNSSINLLEIPFDSIDHNLPPCTENTDSVP 84 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 84 (473)
|+||+|++.++.||++|++.||++|++ +||+|+|++++.+.+.++. .+++|..++.+....... ........
T Consensus 4 M~~il~~~~~~~Ghv~~~~~La~~L~~-~GheV~v~~~~~~~~~~~~-----~G~~~~~~~~~~~~~~~~--~~~~~~~~ 75 (402)
T 3ia7_A 4 QRHILFANVQGHGHVYPSLGLVSELAR-RGHRITYVTTPLFADEVKA-----AGAEVVLYKSEFDTFHVP--EVVKQEDA 75 (402)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHH-TTCEEEEEECHHHHHHHHH-----TTCEEEECCCGGGTSSSS--SSSCCTTH
T ss_pred CCEEEEEeCCCCcccccHHHHHHHHHh-CCCEEEEEcCHHHHHHHHH-----cCCEEEeccccccccccc--ccccccch
Confidence 679999999999999999999999999 9999999999988888888 778898887431111100 01111111
Q ss_pred hhhHHH-HHHHHHhhhHHHHHHHHhHhhhcCCCCccEEEEC-CCcchHHHHHHHhCCceEEEecchHHHHHHHhhhhccC
Q 047833 85 YHLVSK-LIEATLSFKPHFKKLVNDLIDEQNGYKPLCIITD-MFFGWCKEIAQEYGIFHAIFIGGGGFGFACYYSLWVNL 162 (473)
Q Consensus 85 ~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d-~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~ 162 (473)
...+.. +..........+.++++++ +||+||+| ....++..+|+.+|||++.+.+....... +.......
T Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~l~~~-------~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~~~~~~~ 147 (402)
T 3ia7_A 76 ETQLHLVYVRENVAILRAAEEALGDN-------PPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEH-YSLFKELW 147 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTC-------CCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTT-BCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc-------CCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcc-cccccccc
Confidence 222222 3334445556677777777 99999999 77778889999999999998643221000 00000000
Q ss_pred CCCCCCCCcccCCCCCCCCcCCccccchhhhhcCCCChHHHHHHHHhccccCCcEEEEcCccccchhHHHHHHhhcCCCe
Q 047833 163 PHRNMDSDECVLPDFPEASTIHATQLADYLRVADGSDSFSAILQKVLPQWMNADGILVNTVEELDKIGLMYFKRKFGRSV 242 (473)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 242 (473)
+ ......+.........+............ ...+ .. ...+..+.....++++ ....++.++
T Consensus 148 ~--------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~---~~--~~~~~~l~~~~~~~~~-----~~~~~~~~~ 208 (402)
T 3ia7_A 148 K--------SNGQRHPADVEAVHSVLVDLLGKYGVDTP-VKEY---WD--EIEGLTIVFLPKSFQP-----FAETFDERF 208 (402)
T ss_dssp H--------HHTCCCGGGSHHHHHHHHHHHHTTTCCSC-HHHH---HT--CCCSCEEESSCGGGST-----TGGGCCTTE
T ss_pred c--------cccccChhhHHHHHHHHHHHHHHcCCCCC-hhhh---hc--CCCCeEEEEcChHhCC-----ccccCCCCe
Confidence 0 00000000000000011111111111000 0000 00 0113444555444443 245667889
Q ss_pred EEecccCCCccCCCCCCCCCCCchhhHhhhhcCCCCCeEEEEeeCCcccCCHHHHHHHHHHHHhCCCceEEEECCCCCCC
Q 047833 243 WPIGPVLLSTENRGGAGKEYGISTELCKKWLDTKPYTSVLYVSFGSQNTIATSQMMQLAMALEASGKNFIWVVRPPIGFD 322 (473)
Q Consensus 243 ~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~ 322 (473)
+++||+..... ...+|+...+++++|||++||......+.+..+++++...+.++++.+|.+. +
T Consensus 209 ~~vGp~~~~~~--------------~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~ 272 (402)
T 3ia7_A 209 AFVGPTLTGRD--------------GQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGFL--D 272 (402)
T ss_dssp EECCCCCCC------------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTTS--C
T ss_pred EEeCCCCCCcc--------------cCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCcC--C
Confidence 99999865431 1233554445678999999999877778899999999988899999987531 1
Q ss_pred ccccccccCCcEEEecccChHHhhccCCcceeEeccCcchHHHHHhhCCcEEeccc-cccchhhHHHHHHhhcceEEEec
Q 047833 323 INSEIKCSGQGLVVHKWAPQVEILSHRSVSVFLSHCGWNSVLEALSHGVPIIGWPL-AAEQFYNSKLLEEEIGVCVEVAR 401 (473)
Q Consensus 323 ~~~~~~~~~~nv~~~~~vp~~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~-~~DQ~~nA~~v~~~lG~g~~l~~ 401 (473)
.. .....++|+.+.+|+|+.++|++++ +||||||+||++|++++|+|+|++|. ..||+.||.++++. |+|+.+..
T Consensus 273 ~~-~~~~~~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~-g~g~~~~~ 348 (402)
T 3ia7_A 273 PA-VLGPLPPNVEAHQWIPFHSVLAHAR--ACLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIEL-GLGSVLRP 348 (402)
T ss_dssp GG-GGCSCCTTEEEESCCCHHHHHTTEE--EEEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHT-TSEEECCG
T ss_pred hh-hhCCCCCcEEEecCCCHHHHHhhCC--EEEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHc-CCEEEccC
Confidence 11 2234578999999999999999977 59999999999999999999999999 99999999999988 99999987
Q ss_pred CCCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhcccccccCCcHHHHHHHHHHHHHhh
Q 047833 402 GKSSEVLKKDIAAKIELVMNETEKGIELRKNAYEVREIIKNAFKNEENFQGSSVKAMNQFLNAASMV 468 (473)
Q Consensus 402 ~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 468 (473)
.+++.+.|.++|.++|+|+ +++++++++++.+. . .++..++++.+.+.+++.
T Consensus 349 ---~~~~~~~l~~~~~~ll~~~----~~~~~~~~~~~~~~-------~-~~~~~~~~~~i~~~~~~~ 400 (402)
T 3ia7_A 349 ---DQLEPASIREAVERLAADS----AVRERVRRMQRDIL-------S-SGGPARAADEVEAYLGRV 400 (402)
T ss_dssp ---GGCSHHHHHHHHHHHHHCH----HHHHHHHHHHHHHH-------T-SCHHHHHHHHHHHHHHHH
T ss_pred ---CCCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHh-------h-CChHHHHHHHHHHHHhhc
Confidence 7889999999999999999 89999999999986 3 445788888888877654
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=1.1e-40 Score=333.58 Aligned_cols=385 Identities=12% Similarity=0.134 Sum_probs=251.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhccCCCCCCceEEecCCCCCCCCCCCC-------
Q 047833 4 RKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLRKLKSSVPQNSSINLLEIPFDSIDHNLPPC------- 76 (473)
Q Consensus 4 ~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~------- 76 (473)
+|+||+|+++++.||++|+++||++|++ +||+|+|++++.+.+.++. .+++|..++...+..++...
T Consensus 19 ~~mrIl~~~~~~~GHv~p~l~la~~L~~-~GheV~~~~~~~~~~~v~~-----~G~~~~~i~~~~~~~~~~~~~~~~~~~ 92 (441)
T 2yjn_A 19 SHMRVVFSSMASKSHLFGLVPLAWAFRA-AGHEVRVVASPALTEDITA-----AGLTAVPVGTDVDLVDFMTHAGHDIID 92 (441)
T ss_dssp CCCEEEEECCSCHHHHTTTHHHHHHHHH-TTCEEEEEECGGGHHHHHT-----TTCCEEECSCCCCHHHHHHHTTHHHHH
T ss_pred CccEEEEEcCCCcchHhHHHHHHHHHHH-CCCeEEEEeCchhHHHHHh-----CCCceeecCCccchHHHhhhhhccccc
Confidence 5689999999999999999999999999 9999999999998888887 77889888743110010000
Q ss_pred ----CCCC---CC-CChhhHHHHHHHH----H-----h-hhHHHHHHHHhHhhhcCCCCccEEEECCCcchHHHHHHHhC
Q 047833 77 ----TENT---DS-VPYHLVSKLIEAT----L-----S-FKPHFKKLVNDLIDEQNGYKPLCIITDMFFGWCKEIAQEYG 138 (473)
Q Consensus 77 ----~~~~---~~-~~~~~~~~~~~~~----~-----~-~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~~~~~~A~~~g 138 (473)
.... .. .....+......+ . . ....+.++++++ +||+||+|..+.++..+|+.+|
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~pDlVv~d~~~~~~~~aA~~lg 165 (441)
T 2yjn_A 93 YVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKW-------RPDLVIWEPLTFAAPIAAAVTG 165 (441)
T ss_dssp HHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHH-------CCSEEEECTTCTHHHHHHHHHT
T ss_pred ccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhc-------CCCEEEecCcchhHHHHHHHcC
Confidence 0000 00 0111111111111 1 1 455666777777 9999999987788899999999
Q ss_pred CceEEEecchHHHHH---HHhhhhccCCCCCCCCCcccCCCCCCCCcCCccccchhhhhcCCCChHHHHHHHHhc-c---
Q 047833 139 IFHAIFIGGGGFGFA---CYYSLWVNLPHRNMDSDECVLPDFPEASTIHATQLADYLRVADGSDSFSAILQKVLP-Q--- 211 (473)
Q Consensus 139 iP~v~~~~~~~~~~~---~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--- 211 (473)
||++.+...+..... .+.....+.|. .. . ...+.. .+.....+... .
T Consensus 166 iP~v~~~~~~~~~~~~~~~~~~~~~~~~~----------~~------~-~~~~~~---------~l~~~~~~~g~~~~~~ 219 (441)
T 2yjn_A 166 TPHARLLWGPDITTRARQNFLGLLPDQPE----------EH------R-EDPLAE---------WLTWTLEKYGGPAFDE 219 (441)
T ss_dssp CCEEEECSSCCHHHHHHHHHHHHGGGSCT----------TT------C-CCHHHH---------HHHHHHHHTTCCCCCG
T ss_pred CCEEEEecCCCcchhhhhhhhhhcccccc----------cc------c-cchHHH---------HHHHHHHHcCCCCCCc
Confidence 999998654422111 11111111110 00 0 000000 00111111100 0
Q ss_pred -ccCCcEEEEcCccccchhHHHHHHhhcCCCeEEecccCCCccCCCCCCCCCCCchhhHhhhhcCCCCCeEEEEeeCCcc
Q 047833 212 -WMNADGILVNTVEELDKIGLMYFKRKFGRSVWPIGPVLLSTENRGGAGKEYGISTELCKKWLDTKPYTSVLYVSFGSQN 290 (473)
Q Consensus 212 -~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~ 290 (473)
....+..+....+.++++ ..++. ..+++.... .+.++.+|++..+++++|||++||+.
T Consensus 220 ~~~~~~~~l~~~~~~~~~~------~~~~~--~~~~~~~~~-------------~~~~~~~~l~~~~~~~~v~v~~Gs~~ 278 (441)
T 2yjn_A 220 EVVVGQWTIDPAPAAIRLD------TGLKT--VGMRYVDYN-------------GPSVVPEWLHDEPERRRVCLTLGISS 278 (441)
T ss_dssp GGTSCSSEEECSCGGGSCC------CCCCE--EECCCCCCC-------------SSCCCCGGGSSCCSSCEEEEEC----
T ss_pred cccCCCeEEEecCccccCC------CCCCC--CceeeeCCC-------------CCcccchHhhcCCCCCEEEEECCCCc
Confidence 001222333333333321 12210 223332111 12345678887666789999999997
Q ss_pred cC---CHHHHHHHHHHHHhCCCceEEEECCCCCCCccccccccCCcEEEecccChHHhhccCCcceeEeccCcchHHHHH
Q 047833 291 TI---ATSQMMQLAMALEASGKNFIWVVRPPIGFDINSEIKCSGQGLVVHKWAPQVEILSHRSVSVFLSHCGWNSVLEAL 367 (473)
Q Consensus 291 ~~---~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~v~~~I~HGG~gt~~eal 367 (473)
.. ..+.+..+++++...+.++||+++... .. .....++|+.+.+|+||.++|+.++ +||||||+||++|++
T Consensus 279 ~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~---~~-~l~~~~~~v~~~~~~~~~~ll~~ad--~~V~~~G~~t~~Ea~ 352 (441)
T 2yjn_A 279 RENSIGQVSIEELLGAVGDVDAEIIATFDAQQ---LE-GVANIPDNVRTVGFVPMHALLPTCA--ATVHHGGPGSWHTAA 352 (441)
T ss_dssp ------CCSTTTTHHHHHTSSSEEEECCCTTT---TS-SCSSCCSSEEECCSCCHHHHGGGCS--EEEECCCHHHHHHHH
T ss_pred ccccChHHHHHHHHHHHHcCCCEEEEEECCcc---hh-hhccCCCCEEEecCCCHHHHHhhCC--EEEECCCHHHHHHHH
Confidence 64 345677788999888999999987441 11 1123478999999999999998877 699999999999999
Q ss_pred hhCCcEEeccccccchhhHHHHHHhhcceEEEecCCCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhcccc
Q 047833 368 SHGVPIIGWPLAAEQFYNSKLLEEEIGVCVEVARGKSSEVLKKDIAAKIELVMNETEKGIELRKNAYEVREIIKNAFKNE 447 (473)
Q Consensus 368 ~~GvP~l~~P~~~DQ~~nA~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~l~~~~~~~~~~~ 447 (473)
++|+|+|++|...||+.||+++++. |+|+.++. .+++.+.|.++|.++|+|+ +++++++++++.++
T Consensus 353 ~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~---~~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~------ 418 (441)
T 2yjn_A 353 IHGVPQVILPDGWDTGVRAQRTQEF-GAGIALPV---PELTPDQLRESVKRVLDDP----AHRAGAARMRDDML------ 418 (441)
T ss_dssp HTTCCEEECCCSHHHHHHHHHHHHH-TSEEECCT---TTCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHH------
T ss_pred HhCCCEEEeCCcccHHHHHHHHHHc-CCEEEccc---ccCCHHHHHHHHHHHhcCH----HHHHHHHHHHHHHH------
Confidence 9999999999999999999999977 99999987 7899999999999999999 89999999999996
Q ss_pred cccCCcHHHHHHHHHHHHHhhhh
Q 047833 448 ENFQGSSVKAMNQFLNAASMVKE 470 (473)
Q Consensus 448 ~~~~g~~~~~~~~~~~~~~~~~~ 470 (473)
..+| ..+.++.+.+.++++++
T Consensus 419 -~~~~-~~~~~~~i~~~~~~~~~ 439 (441)
T 2yjn_A 419 -AEPS-PAEVVGICEELAAGRRE 439 (441)
T ss_dssp -TSCC-HHHHHHHHHHHHHC---
T ss_pred -cCCC-HHHHHHHHHHHHHhccC
Confidence 4344 78888888887776654
No 14
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=2.5e-38 Score=310.86 Aligned_cols=367 Identities=13% Similarity=0.087 Sum_probs=256.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhccCCCCCCceEEecCCCCCCCCCC---CCCCCCCC
Q 047833 6 ETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLRKLKSSVPQNSSINLLEIPFDSIDHNLP---PCTENTDS 82 (473)
Q Consensus 6 ~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~ 82 (473)
+||++++.++.||++|+++||++|++ +||+|++++++.+.+.++. .++++..++.......+. .+......
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~-~Gh~V~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARN-AGHQVVMAANQDMGPVVTG-----VGLPAVATTDLPIRHFITTDREGRPEAIP 74 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHH-TTCEEEEEECGGGHHHHHH-----TTCCEEESCSSCHHHHHHBCTTSCBCCCC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHH-CCCEEEEEeCHHHHHHHHh-----CCCEEEEeCCcchHHHHhhhcccCccccC
Confidence 48999999999999999999999999 9999999999888777777 677888776421000000 00000000
Q ss_pred CChhhHHH-----HHHHHHhhhHHHHHHHHhHhhhcCCCCccEEEECCCcchHHHHHHHhCCceEEEecchHHHHHHHhh
Q 047833 83 VPYHLVSK-----LIEATLSFKPHFKKLVNDLIDEQNGYKPLCIITDMFFGWCKEIAQEYGIFHAIFIGGGGFGFACYYS 157 (473)
Q Consensus 83 ~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~ 157 (473)
........ +..........+.+++++. +||+||+|.+..++..+|+.+|||++.+...+..
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-------~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~------- 140 (384)
T 2p6p_A 75 SDPVAQARFTGRWFARMAASSLPRMLDFSRAW-------RPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD------- 140 (384)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC-------
T ss_pred cchHHHHHHHHHHHHhhHHHHHHHHHHHHhcc-------CCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc-------
Confidence 00011111 1112234456677778887 9999999987778889999999999987532110
Q ss_pred hhccCCCCCCCCCcccCCCCCCCCcCCccccchhhhhcCCCChHHHHHHHHh-ccccCCcEEEEcCccccchhHHHHHHh
Q 047833 158 LWVNLPHRNMDSDECVLPDFPEASTIHATQLADYLRVADGSDSFSAILQKVL-PQWMNADGILVNTVEELDKIGLMYFKR 236 (473)
Q Consensus 158 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~ 236 (473)
... . . .... ....+...+.. ......+.++.++.+.++++ .
T Consensus 141 --------------------~~~--~-~----~~~~-----~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~------~ 182 (384)
T 2p6p_A 141 --------------------ADG--I-H----PGAD-----AELRPELSELGLERLPAPDLFIDICPPSLRPA------N 182 (384)
T ss_dssp --------------------CTT--T-H----HHHH-----HHTHHHHHHTTCSSCCCCSEEEECSCGGGSCT------T
T ss_pred --------------------cch--h-h----HHHH-----HHHHHHHHHcCCCCCCCCCeEEEECCHHHCCC------C
Confidence 000 0 0 0000 00001111110 01111456788887776643 1
Q ss_pred hcC-CCeEEecccCCCccCCCCCCCCCCCchhhHhhhhcCCCCCeEEEEeeCCcccC-----CHHHHHHHHHHHHhCCCc
Q 047833 237 KFG-RSVWPIGPVLLSTENRGGAGKEYGISTELCKKWLDTKPYTSVLYVSFGSQNTI-----ATSQMMQLAMALEASGKN 310 (473)
Q Consensus 237 ~~~-~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~~-----~~~~~~~~~~al~~~~~~ 310 (473)
.++ .++.+++ ... +.++.+|++..+++++|||++||.... ..+.+..+++++.+.+.+
T Consensus 183 ~~~~~~~~~~~---~~~-------------~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~ 246 (384)
T 2p6p_A 183 AAPARMMRHVA---TSR-------------QCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVE 246 (384)
T ss_dssp SCCCEECCCCC---CCC-------------CCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCE
T ss_pred CCCCCceEecC---CCC-------------CCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcE
Confidence 222 1222331 111 123557887655578999999999864 457788899999999999
Q ss_pred eEEEECCCCCCCccccccccCCcEEEecccChHHhhccCCcceeEeccCcchHHHHHhhCCcEEeccccccchhhHHHHH
Q 047833 311 FIWVVRPPIGFDINSEIKCSGQGLVVHKWAPQVEILSHRSVSVFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLE 390 (473)
Q Consensus 311 ~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~nA~~v~ 390 (473)
++|+++.. +. ......++|+.+ +|+||.++|++++ +||||||+||++||+++|+|+|++|...||+.||.+++
T Consensus 247 ~~~~~g~~---~~-~~l~~~~~~v~~-~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~ 319 (384)
T 2p6p_A 247 LIVAAPDT---VA-EALRAEVPQARV-GWTPLDVVAPTCD--LLVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVA 319 (384)
T ss_dssp EEEECCHH---HH-HHHHHHCTTSEE-ECCCHHHHGGGCS--EEEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHHHH
T ss_pred EEEEeCCC---CH-HhhCCCCCceEE-cCCCHHHHHhhCC--EEEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHHHH
Confidence 99998632 00 111234789999 9999999998876 69999999999999999999999999999999999999
Q ss_pred HhhcceEEEecCCCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhcccccccCCcHHHHHHHHHHHHHhhh
Q 047833 391 EEIGVCVEVARGKSSEVLKKDIAAKIELVMNETEKGIELRKNAYEVREIIKNAFKNEENFQGSSVKAMNQFLNAASMVK 469 (473)
Q Consensus 391 ~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 469 (473)
+. |+|+.++. ..++.+.|.++|+++|+|+ ++++++++++++++ ..+| ..++++.+.+.+..+-
T Consensus 320 ~~-g~g~~~~~---~~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~-------~~~~-~~~~~~~i~~~~~~~~ 382 (384)
T 2p6p_A 320 DY-GAAIALLP---GEDSTEAIADSCQELQAKD----TYARRAQDLSREIS-------GMPL-PATVVTALEQLAHHHH 382 (384)
T ss_dssp HH-TSEEECCT---TCCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHH-------TSCC-HHHHHHHHHHHHHHHC
T ss_pred HC-CCeEecCc---CCCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHH-------hCCC-HHHHHHHHHHHhhhcc
Confidence 77 99999987 6789999999999999999 89999999999997 4454 7889998888887653
No 15
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=4e-38 Score=314.15 Aligned_cols=388 Identities=16% Similarity=0.179 Sum_probs=258.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhccCCCCCCceEEecCCCCCCCCCCCCCCCC---C
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLRKLKSSVPQNSSINLLEIPFDSIDHNLPPCTENT---D 81 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~ 81 (473)
|+||++++.++.||++|++.||++|++ +||+|+++++....+.+.. .++++..++.. ++...... .
T Consensus 7 m~kIl~~~~~~~Gh~~p~~~la~~L~~-~G~~V~~~~~~~~~~~~~~-----~g~~~~~~~~~-----~~~~~~~~~~~~ 75 (430)
T 2iyf_A 7 PAHIAMFSIAAHGHVNPSLEVIRELVA-RGHRVTYAIPPVFADKVAA-----TGPRPVLYHST-----LPGPDADPEAWG 75 (430)
T ss_dssp -CEEEEECCSCHHHHGGGHHHHHHHHH-TTCEEEEEECGGGHHHHHT-----TSCEEEECCCC-----SCCTTSCGGGGC
T ss_pred cceEEEEeCCCCccccchHHHHHHHHH-CCCeEEEEeCHHHHHHHHh-----CCCEEEEcCCc-----Cccccccccccc
Confidence 579999999999999999999999999 9999999999988777777 67788877632 11111100 0
Q ss_pred CCChhhHHHHHHHHHhhhHHHHHHHHhHhhhcCCCCccEEEECCCcchHHHHHHHhCCceEEEecchHHHHHHHhhhhcc
Q 047833 82 SVPYHLVSKLIEATLSFKPHFKKLVNDLIDEQNGYKPLCIITDMFFGWCKEIAQEYGIFHAIFIGGGGFGFACYYSLWVN 161 (473)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~ 161 (473)
......+..+..........+.+++++. +||+||+|.+..++..+|+.+|||++.+.+.+.........+...
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~-------~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~ 148 (430)
T 2iyf_A 76 STLLDNVEPFLNDAIQALPQLADAYADD-------IPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEP 148 (430)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHTTS-------CCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhcc-------CCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccccc
Confidence 0011111222333344556677777777 999999998777888999999999999875432000000000000
Q ss_pred CCCCCCCCCcccCCCCCCCCcCCccccchhhhhcCCCChHHHHHHHHhccccCCcEEEEcCccccchhHHHHHHhhcCCC
Q 047833 162 LPHRNMDSDECVLPDFPEASTIHATQLADYLRVADGSDSFSAILQKVLPQWMNADGILVNTVEELDKIGLMYFKRKFGRS 241 (473)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 241 (473)
.. ......+... .....+...+.......... ......+.+++++.+.+++. ...++++
T Consensus 149 ~~-----~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~-------~~~~~~~~~l~~~~~~~~~~-----~~~~~~~ 207 (430)
T 2iyf_A 149 MW-----REPRQTERGR----AYYARFEAWLKENGITEHPD-------TFASHPPRSLVLIPKALQPH-----ADRVDED 207 (430)
T ss_dssp HH-----HHHHHSHHHH----HHHHHHHHHHHHTTCCSCHH-------HHHHCCSSEEECSCGGGSTT-----GGGSCTT
T ss_pred hh-----hhhccchHHH----HHHHHHHHHHHHhCCCCCHH-------HHhcCCCcEEEeCcHHhCCC-----cccCCCc
Confidence 00 0000000000 00000111111100000000 01113466788888777754 2456677
Q ss_pred -eEEecccCCCccCCCCCCCCCCCchhhHhhhhcCCCCCeEEEEeeCCcccCCHHHHHHHHHHHHhC-CCceEEEECCCC
Q 047833 242 -VWPIGPVLLSTENRGGAGKEYGISTELCKKWLDTKPYTSVLYVSFGSQNTIATSQMMQLAMALEAS-GKNFIWVVRPPI 319 (473)
Q Consensus 242 -~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~ 319 (473)
++++||...... ...+|....+++++||+++||......+.+..++++++.. +.+++|.+|...
T Consensus 208 ~v~~vG~~~~~~~--------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~ 273 (430)
T 2iyf_A 208 VYTFVGACQGDRA--------------EEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRKV 273 (430)
T ss_dssp TEEECCCCC-------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC---
T ss_pred cEEEeCCcCCCCC--------------CCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCCC
Confidence 999998653320 0123544444678999999999855578888899999885 889988887531
Q ss_pred CCCccccccccCCcEEEecccChHHhhccCCcceeEeccCcchHHHHHhhCCcEEeccccccchhhHHHHHHhhcceEEE
Q 047833 320 GFDINSEIKCSGQGLVVHKWAPQVEILSHRSVSVFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEIGVCVEV 399 (473)
Q Consensus 320 ~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~nA~~v~~~lG~g~~l 399 (473)
+. ......++|+.+.+|+||.++|++++ +||||||+||++||+++|+|+|++|..+||..||+++++. |+|+.+
T Consensus 274 --~~-~~l~~~~~~v~~~~~~~~~~~l~~ad--~~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~-g~g~~~ 347 (430)
T 2iyf_A 274 --TP-AELGELPDNVEVHDWVPQLAILRQAD--LFVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQGL-GVARKL 347 (430)
T ss_dssp --CG-GGGCSCCTTEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHT-TSEEEC
T ss_pred --Ch-HHhccCCCCeEEEecCCHHHHhhccC--EEEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHHc-CCEEEc
Confidence 11 11123468999999999999999988 5999999999999999999999999999999999999977 999999
Q ss_pred ecCCCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhcccccccCCcHHHHHHHHHHHHH
Q 047833 400 ARGKSSEVLKKDIAAKIELVMNETEKGIELRKNAYEVREIIKNAFKNEENFQGSSVKAMNQFLNAAS 466 (473)
Q Consensus 400 ~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 466 (473)
.. ..++.++|.++|.++++|+ ++++++.+.++++++ .+ +..+.++.+++.++
T Consensus 348 ~~---~~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~~-------~~-~~~~~~~~i~~~~~ 399 (430)
T 2iyf_A 348 AT---EEATADLLRETALALVDDP----EVARRLRRIQAEMAQ-------EG-GTRRAADLIEAELP 399 (430)
T ss_dssp CC---C-CCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHH-------HC-HHHHHHHHHHTTSC
T ss_pred CC---CCCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHh-------cC-cHHHHHHHHHHHhh
Confidence 87 6789999999999999998 899999999988863 23 46677777766544
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=5.4e-37 Score=302.80 Aligned_cols=365 Identities=14% Similarity=0.128 Sum_probs=231.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhccCCCCCCceEEecCCCCCCCCCC----CCCC
Q 047833 3 QRKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLRKLKSSVPQNSSINLLEIPFDSIDHNLP----PCTE 78 (473)
Q Consensus 3 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~ 78 (473)
..++||+|++.++.||++|++.|+++|++ +||+|++++++.+.+.++. .++.+..++.+.....+. .+..
T Consensus 13 ~~~MrIl~~~~~~~gh~~~~~~La~~L~~-~GheV~v~~~~~~~~~~~~-----~G~~~~~~~~~~~~~~~~~~~~~~~~ 86 (398)
T 4fzr_A 13 GSHMRILVIAGCSEGFVMPLVPLSWALRA-AGHEVLVAASENMGPTVTG-----AGLPFAPTCPSLDMPEVLSWDREGNR 86 (398)
T ss_dssp --CCEEEEECCSSHHHHGGGHHHHHHHHH-TTCEEEEEEEGGGHHHHHH-----TTCCEEEEESSCCHHHHHSBCTTSCB
T ss_pred CCceEEEEEcCCCcchHHHHHHHHHHHHH-CCCEEEEEcCHHHHHHHHh-----CCCeeEecCCccchHhhhhhhccCcc
Confidence 35789999999999999999999999999 9999999999888888888 677787776321100000 0000
Q ss_pred C-CCCCChhhH----HHHHHHHHhhhHHHHHHHHhHhhhcCCCCccEEEECCCcchHHHHHHHhCCceEEEecchHHHHH
Q 047833 79 N-TDSVPYHLV----SKLIEATLSFKPHFKKLVNDLIDEQNGYKPLCIITDMFFGWCKEIAQEYGIFHAIFIGGGGFGFA 153 (473)
Q Consensus 79 ~-~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~ 153 (473)
. ......... ..+......+...+.++++++ +||+|++|...+++..+|+.+|||++.+.........
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~ 159 (398)
T 4fzr_A 87 TTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERW-------KPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPEL 159 (398)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHH
T ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchh
Confidence 0 000000111 122223345566778888888 9999999987788899999999999987543210000
Q ss_pred HHhhhhccCCCCCCCCCcccCCCCCCCCcCCccccchhhhhcCCCChHHHHHHHHh-ccccCCcEEEEcCccccchhHHH
Q 047833 154 CYYSLWVNLPHRNMDSDECVLPDFPEASTIHATQLADYLRVADGSDSFSAILQKVL-PQWMNADGILVNTVEELDKIGLM 232 (473)
Q Consensus 154 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~ 232 (473)
... .....+. ....+.. .........+......+...
T Consensus 160 ~~~--------------------------~~~~~l~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 197 (398)
T 4fzr_A 160 IKS--------------------------AGVGELA-------------PELAELGLTDFPDPLLSIDVCPPSMEAQ--- 197 (398)
T ss_dssp HHH--------------------------HHHHHTH-------------HHHHTTTCSSCCCCSEEEECSCGGGC-----
T ss_pred hhH--------------------------HHHHHHH-------------HHHHHcCCCCCCCCCeEEEeCChhhCCC---
Confidence 000 0000000 0000000 00111223333333333311
Q ss_pred HHHhhcCCCeEEecccCCCccCCCCCCCCCCCchhhHhhhhcCCCCCeEEEEeeCCcccC--------CHHHHHHHHHHH
Q 047833 233 YFKRKFGRSVWPIGPVLLSTENRGGAGKEYGISTELCKKWLDTKPYTSVLYVSFGSQNTI--------ATSQMMQLAMAL 304 (473)
Q Consensus 233 ~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~~--------~~~~~~~~~~al 304 (473)
.. .....+...... ....++.+|+...+++++|||++||.... ..+.+..+++++
T Consensus 198 --~~---~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al 260 (398)
T 4fzr_A 198 --PK---PGTTKMRYVPYN------------GRNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQEL 260 (398)
T ss_dssp -------CCCEECCCCCCC------------CSSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHG
T ss_pred --CC---CCCCCeeeeCCC------------CCCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHH
Confidence 00 111111111111 01223456776655678999999999753 346688899999
Q ss_pred HhCCCceEEEECCCCCCCccccccccCCcEEEecccChHHhhccCCcceeEeccCcchHHHHHhhCCcEEeccccccchh
Q 047833 305 EASGKNFIWVVRPPIGFDINSEIKCSGQGLVVHKWAPQVEILSHRSVSVFLSHCGWNSVLEALSHGVPIIGWPLAAEQFY 384 (473)
Q Consensus 305 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~ 384 (473)
.+.+.+++|+.+... . ......++|+++.+|+|+.++|++++ +||||||.||++||+++|+|+|++|...||+.
T Consensus 261 ~~~~~~~v~~~~~~~---~-~~l~~~~~~v~~~~~~~~~~ll~~ad--~~v~~gG~~t~~Ea~~~G~P~v~~p~~~~q~~ 334 (398)
T 4fzr_A 261 PKLGFEVVVAVSDKL---A-QTLQPLPEGVLAAGQFPLSAIMPACD--VVVHHGGHGTTLTCLSEGVPQVSVPVIAEVWD 334 (398)
T ss_dssp GGGTCEEEECCCC------------CCTTEEEESCCCHHHHGGGCS--EEEECCCHHHHHHHHHTTCCEEECCCSGGGHH
T ss_pred HhCCCEEEEEeCCcc---h-hhhccCCCcEEEeCcCCHHHHHhhCC--EEEecCCHHHHHHHHHhCCCEEecCCchhHHH
Confidence 988999999987541 1 12234578999999999999999977 59999999999999999999999999999999
Q ss_pred hHHHHHHhhcceEEEecCCCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhcccccccCCcHHHHHHHH
Q 047833 385 NSKLLEEEIGVCVEVARGKSSEVLKKDIAAKIELVMNETEKGIELRKNAYEVREIIKNAFKNEENFQGSSVKAMNQF 461 (473)
Q Consensus 385 nA~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~g~~~~~~~~~ 461 (473)
||.++++. |+|+.++. .+++.+.|.++|.++|+|+ ++++++++.+++++ +..+..+.++.+
T Consensus 335 ~a~~~~~~-g~g~~~~~---~~~~~~~l~~ai~~ll~~~----~~~~~~~~~~~~~~--------~~~~~~~~~~~l 395 (398)
T 4fzr_A 335 SARLLHAA-GAGVEVPW---EQAGVESVLAACARIRDDS----SYVGNARRLAAEMA--------TLPTPADIVRLI 395 (398)
T ss_dssp HHHHHHHT-TSEEECC----------CHHHHHHHHHHCT----HHHHHHHHHHHHHT--------TSCCHHHHHHHH
T ss_pred HHHHHHHc-CCEEecCc---ccCCHHHHHHHHHHHHhCH----HHHHHHHHHHHHHH--------cCCCHHHHHHHH
Confidence 99999988 99999987 7889999999999999999 89999999999985 334455555544
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=6.6e-36 Score=295.02 Aligned_cols=362 Identities=13% Similarity=0.150 Sum_probs=246.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhccCCCCCCceEEecCCCCCCCCCC-------C-
Q 047833 4 RKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLRKLKSSVPQNSSINLLEIPFDSIDHNLP-------P- 75 (473)
Q Consensus 4 ~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~-------~- 75 (473)
+++||+|++.++.||++|++.||++|++ +||+|+++++ .+.+.++. .++++..++.+.+...+. .
T Consensus 19 ~~MrIl~~~~~~~Ghv~~~~~La~~L~~-~GheV~v~~~-~~~~~~~~-----~G~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (398)
T 3oti_A 19 RHMRVLFVSSPGIGHLFPLIQLAWGFRT-AGHDVLIAVA-EHADRAAA-----AGLEVVDVAPDYSAVKVFEQVAKDNPR 91 (398)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHH-TTCEEEEEES-SCHHHHHT-----TTCEEEESSTTCCHHHHHHHHHHHCHH
T ss_pred hcCEEEEEcCCCcchHhHHHHHHHHHHH-CCCEEEEecc-chHHHHHh-----CCCeeEecCCccCHHHHhhhcccCCcc
Confidence 4679999999999999999999999999 9999999999 88888888 778888887421000000 0
Q ss_pred ---CC-CCCCCCChhhHHHHHHHHHhhhHHHHHHHHhHhhhcCCCCccEEEECCCcchHHHHHHHhCCceEEEecchHHH
Q 047833 76 ---CT-ENTDSVPYHLVSKLIEATLSFKPHFKKLVNDLIDEQNGYKPLCIITDMFFGWCKEIAQEYGIFHAIFIGGGGFG 151 (473)
Q Consensus 76 ---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~~~~~~A~~~giP~v~~~~~~~~~ 151 (473)
.. .............+......+...+.++++++ +||+||+|...+++..+|+.+|||++.+.......
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-------~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~~ 164 (398)
T 3oti_A 92 FAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDY-------RPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWRT 164 (398)
T ss_dssp HHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHH-------CCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCCC
T ss_pred ccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHc-------CCCEEEECchhhHHHHHHHHcCCCEEEEeccCCCc
Confidence 00 00011111222334445567778889999999 99999999888888899999999999875321000
Q ss_pred HHHHhhhhccCCCCCCCCCcccCCCCCCCCcCCccccchhhhhcCCCChHHHHHHHHhccccCCcEEEEcCccccchhHH
Q 047833 152 FACYYSLWVNLPHRNMDSDECVLPDFPEASTIHATQLADYLRVADGSDSFSAILQKVLPQWMNADGILVNTVEELDKIGL 231 (473)
Q Consensus 152 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 231 (473)
... ..... ..+.....+...........+......+..+.
T Consensus 165 -------------------------------~~~---~~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 204 (398)
T 3oti_A 165 -------------------------------RGM---HRSIA-----SFLTDLMDKHQVSLPEPVATIESFPPSLLLEA- 204 (398)
T ss_dssp -------------------------------TTH---HHHHH-----TTCHHHHHHTTCCCCCCSEEECSSCGGGGTTS-
T ss_pred -------------------------------cch---hhHHH-----HHHHHHHHHcCCCCCCCCeEEEeCCHHHCCCC-
Confidence 000 00000 00111111111111111223322222222110
Q ss_pred HHHHhhcCCCeEEecccCCCccCCCCCCCCCCCchhhHhhhhcCCCCCeEEEEeeCCcccC--CHHHHHHHHHHHHhCCC
Q 047833 232 MYFKRKFGRSVWPIGPVLLSTENRGGAGKEYGISTELCKKWLDTKPYTSVLYVSFGSQNTI--ATSQMMQLAMALEASGK 309 (473)
Q Consensus 232 ~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~~--~~~~~~~~~~al~~~~~ 309 (473)
....+ .+.++ |. ..+....+|+...+++++|||++||.... ..+.+..+++++.+.+.
T Consensus 205 --~~~~~--~~~~~-~~---------------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~ 264 (398)
T 3oti_A 205 --EPEGW--FMRWV-PY---------------GGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDA 264 (398)
T ss_dssp --CCCSB--CCCCC-CC---------------CCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSS
T ss_pred --CCCCC--Ccccc-CC---------------CCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCC
Confidence 00011 11111 00 11223445666556688999999999653 56778889999999999
Q ss_pred ceEEEECCCCCCCccccccccCCcEEEecccChHHhhccCCcceeEeccCcchHHHHHhhCCcEEeccccccchhhH--H
Q 047833 310 NFIWVVRPPIGFDINSEIKCSGQGLVVHKWAPQVEILSHRSVSVFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNS--K 387 (473)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~nA--~ 387 (473)
+++|+++.. +. ......++|+.+.+|+|+.++|++++ +||||||.||++||+++|+|+|++|...||+.|| .
T Consensus 265 ~~v~~~g~~---~~-~~l~~~~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~ 338 (398)
T 3oti_A 265 DFVLALGDL---DI-SPLGTLPRNVRAVGWTPLHTLLRTCT--AVVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTARE 338 (398)
T ss_dssp EEEEECTTS---CC-GGGCSCCTTEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHH
T ss_pred EEEEEECCc---Ch-hhhccCCCcEEEEccCCHHHHHhhCC--EEEECCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHH
Confidence 999999754 11 12234578999999999999999977 5999999999999999999999999999999999 9
Q ss_pred HHHHhhcceEEEecCCCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhcccccccCCcHHHHHHHHHHHH
Q 047833 388 LLEEEIGVCVEVARGKSSEVLKKDIAAKIELVMNETEKGIELRKNAYEVREIIKNAFKNEENFQGSSVKAMNQFLNAA 465 (473)
Q Consensus 388 ~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 465 (473)
++++. |+|+.++. .+.+.+.|. ++|+|+ ++++++++++++++ ...+ ..+.++.+.+.+
T Consensus 339 ~~~~~-g~g~~~~~---~~~~~~~l~----~ll~~~----~~~~~~~~~~~~~~-------~~~~-~~~~~~~l~~l~ 396 (398)
T 3oti_A 339 AVSRR-GIGLVSTS---DKVDADLLR----RLIGDE----SLRTAAREVREEMV-------ALPT-PAETVRRIVERI 396 (398)
T ss_dssp HHHHH-TSEEECCG---GGCCHHHHH----HHHHCH----HHHHHHHHHHHHHH-------TSCC-HHHHHHHHHHHH
T ss_pred HHHHC-CCEEeeCC---CCCCHHHHH----HHHcCH----HHHHHHHHHHHHHH-------hCCC-HHHHHHHHHHHh
Confidence 99977 99999987 778888776 889999 89999999999996 3344 677777666544
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=1.8e-34 Score=284.01 Aligned_cols=370 Identities=12% Similarity=0.128 Sum_probs=241.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhccCCCCCCceEEec-CCCCCCCCC-----CCCCC
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLRKLKSSVPQNSSINLLEI-PFDSIDHNL-----PPCTE 78 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~~l-----~~~~~ 78 (473)
++||+|++.++.||++|++.|+++|++ +||+|++++++.+.+.+.. .++++..+ +.+...... .....
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~-~GheV~v~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQA-SGHEVLIAAPPELQATAHG-----AGLTTAGIRGNDRTGDTGGTTQLRFPNP 74 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHH-TTCEEEEEECHHHHHHHHH-----BTCEEEEC--------------CCSCCG
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHH-CCCEEEEecChhhHHHHHh-----CCCceeeecCCccchhhhhhhccccccc
Confidence 368999999999999999999999999 9999999999888888888 66788777 322111100 00000
Q ss_pred CCCCCChhhH-HHHHHHHHhh-------hHHHHHHHHhHhhhcCCCCccEEEECCCcchHHHHHHHhCCceEEEecchHH
Q 047833 79 NTDSVPYHLV-SKLIEATLSF-------KPHFKKLVNDLIDEQNGYKPLCIITDMFFGWCKEIAQEYGIFHAIFIGGGGF 150 (473)
Q Consensus 79 ~~~~~~~~~~-~~~~~~~~~~-------~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~~~~~~A~~~giP~v~~~~~~~~ 150 (473)
.......... ..+......+ ...+.++++++ +||+|++|...+++..+|+.+|||++.+......
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-------~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~ 147 (391)
T 3tsa_A 75 AFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAW-------RPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDP 147 (391)
T ss_dssp GGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------CCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCC
T ss_pred ccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhc-------CCCEEEeCcchhHHHHHHHHhCCCEEEEecCCcc
Confidence 0000000111 2222222333 67778888888 9999999987777889999999999997533210
Q ss_pred HHHHHhhhhccCCCCCCCCCcccCCCCCCCCcCCccccchhhhhcCCCChHHHHHHHHhc-cccCCcEEEEcCccccchh
Q 047833 151 GFACYYSLWVNLPHRNMDSDECVLPDFPEASTIHATQLADYLRVADGSDSFSAILQKVLP-QWMNADGILVNTVEELDKI 229 (473)
Q Consensus 151 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~ 229 (473)
. .. ....... ..+.....+... ........+.....+++..
T Consensus 148 ~-------------------------------~~--~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (391)
T 3tsa_A 148 T-------------------------------AG--PFSDRAH-----ELLDPVCRHHGLTGLPTPELILDPCPPSLQAS 189 (391)
T ss_dssp T-------------------------------TT--HHHHHHH-----HHHHHHHHHTTSSSSCCCSEEEECSCGGGSCT
T ss_pred c-------------------------------cc--cccchHH-----HHHHHHHHHcCCCCCCCCceEEEecChhhcCC
Confidence 0 00 0000000 001111111110 0111133343333333311
Q ss_pred HHHHHHhhcCCCeEEecccCCCccCCCCCCCCCCCchhhHhhhhcCCCCCeEEEEeeCCccc--CC-HHHHHHHHHHHHh
Q 047833 230 GLMYFKRKFGRSVWPIGPVLLSTENRGGAGKEYGISTELCKKWLDTKPYTSVLYVSFGSQNT--IA-TSQMMQLAMALEA 306 (473)
Q Consensus 230 ~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~--~~-~~~~~~~~~al~~ 306 (473)
.......+.|+ |.. .+.....|+...+++++||+++||... .. .+.+..++++ .+
T Consensus 190 -----~~~~~~~~~~~-p~~---------------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~ 247 (391)
T 3tsa_A 190 -----DAPQGAPVQYV-PYN---------------GSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TE 247 (391)
T ss_dssp -----TSCCCEECCCC-CCC---------------CCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HT
T ss_pred -----CCCccCCeeee-cCC---------------CCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-cc
Confidence 00000111222 110 112334677665668899999999954 33 6778888888 77
Q ss_pred C-CCceEEEECCCCCCCccccccccCCcEEEecccChHHhhccCCcceeEeccCcchHHHHHhhCCcEEeccccccchhh
Q 047833 307 S-GKNFIWVVRPPIGFDINSEIKCSGQGLVVHKWAPQVEILSHRSVSVFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYN 385 (473)
Q Consensus 307 ~-~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~n 385 (473)
. +.+++|+.+.. .. ......++|+++.+|+|+.+++++++ +||||||.||++||+++|+|+|++|...||+.|
T Consensus 248 ~p~~~~v~~~~~~---~~-~~l~~~~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~ 321 (391)
T 3tsa_A 248 LPGVEAVIAVPPE---HR-ALLTDLPDNARIAESVPLNLFLRTCE--LVICAGGSGTAFTATRLGIPQLVLPQYFDQFDY 321 (391)
T ss_dssp STTEEEEEECCGG---GG-GGCTTCCTTEEECCSCCGGGTGGGCS--EEEECCCHHHHHHHHHTTCCEEECCCSTTHHHH
T ss_pred CCCeEEEEEECCc---ch-hhcccCCCCEEEeccCCHHHHHhhCC--EEEeCCCHHHHHHHHHhCCCEEecCCcccHHHH
Confidence 7 78999988643 11 12224578999999999999998877 599999999999999999999999999999999
Q ss_pred HHHHHHhhcceEEEecCCCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhcccccccCCcHHHHHHHHHHHH
Q 047833 386 SKLLEEEIGVCVEVARGKSSEVLKKDIAAKIELVMNETEKGIELRKNAYEVREIIKNAFKNEENFQGSSVKAMNQFLNAA 465 (473)
Q Consensus 386 A~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 465 (473)
|.++++. |+|+.+... ....+.+.|.++|.++|+|+ ++++++.++++++. . .++..+.++.+.+.+
T Consensus 322 a~~~~~~-g~g~~~~~~-~~~~~~~~l~~ai~~ll~~~----~~~~~~~~~~~~~~-------~-~~~~~~~~~~i~~~~ 387 (391)
T 3tsa_A 322 ARNLAAA-GAGICLPDE-QAQSDHEQFTDSIATVLGDT----GFAAAAIKLSDEIT-------A-MPHPAALVRTLENTA 387 (391)
T ss_dssp HHHHHHT-TSEEECCSH-HHHTCHHHHHHHHHHHHTCT----HHHHHHHHHHHHHH-------T-SCCHHHHHHHHHHC-
T ss_pred HHHHHHc-CCEEecCcc-cccCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHH-------c-CCCHHHHHHHHHHHH
Confidence 9999988 999988520 01378999999999999999 89999999999986 3 344678888777665
Q ss_pred Hh
Q 047833 466 SM 467 (473)
Q Consensus 466 ~~ 467 (473)
.+
T Consensus 388 ~~ 389 (391)
T 3tsa_A 388 AI 389 (391)
T ss_dssp --
T ss_pred hc
Confidence 53
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=2.1e-32 Score=271.21 Aligned_cols=371 Identities=15% Similarity=0.185 Sum_probs=252.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhccCCCCCCceEEecCCCC------------CC
Q 047833 3 QRKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLRKLKSSVPQNSSINLLEIPFDS------------ID 70 (473)
Q Consensus 3 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~------------~~ 70 (473)
..++||++++.++.||++|++.||++|++ +||+|++++++.+.+.+.. .++++..++... ..
T Consensus 18 ~~~MrIl~~~~~~~Gh~~~~~~la~~L~~-~GheV~v~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~ 91 (412)
T 3otg_A 18 GRHMRVLFASLGTHGHTYPLLPLATAARA-AGHEVTFATGEGFAGTLRK-----LGFEPVATGMPVFDGFLAALRIRFDT 91 (412)
T ss_dssp CCSCEEEEECCSSHHHHGGGHHHHHHHHH-TTCEEEEEECGGGHHHHHH-----TTCEEEECCCCHHHHHHHHHHHHHSC
T ss_pred cceeEEEEEcCCCcccHHHHHHHHHHHHH-CCCEEEEEccHHHHHHHHh-----cCCceeecCcccccchhhhhhhhhcc
Confidence 35789999999999999999999999999 9999999999887777777 677888777300 00
Q ss_pred CCCCCCCCCCCCCChhhH-HHHHHH-HHhhhHHHHHHHHhHhhhcCCCCccEEEECCCcchHHHHHHHhCCceEEEecch
Q 047833 71 HNLPPCTENTDSVPYHLV-SKLIEA-TLSFKPHFKKLVNDLIDEQNGYKPLCIITDMFFGWCKEIAQEYGIFHAIFIGGG 148 (473)
Q Consensus 71 ~~l~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~~~~~~A~~~giP~v~~~~~~ 148 (473)
...+. .......... ..+... ...+...+.++++++ +||+|+++...+++..+|+.+|||+|.+....
T Consensus 92 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-------~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~ 161 (412)
T 3otg_A 92 DSPEG---LTPEQLSELPQIVFGRVIPQRVFDELQPVIERL-------RPDLVVQEISNYGAGLAALKAGIPTICHGVGR 161 (412)
T ss_dssp SCCTT---CCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHH-------CCSEEEEETTCHHHHHHHHHHTCCEEEECCSC
T ss_pred cCCcc---CChhHhhHHHHHHHhccchHHHHHHHHHHHHhc-------CCCEEEECchhhHHHHHHHHcCCCEEEecccc
Confidence 00000 0000000011 111122 233456778888888 99999999877778889999999999864321
Q ss_pred HHHHHHHhhhhccCCCCCCCCCcccCCCCCCCCcCCccccchhhhhcCCCChHHHHHHHHhc------cccCCcEEEEcC
Q 047833 149 GFGFACYYSLWVNLPHRNMDSDECVLPDFPEASTIHATQLADYLRVADGSDSFSAILQKVLP------QWMNADGILVNT 222 (473)
Q Consensus 149 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 222 (473)
... +. . ...+. ..+.+...+... .....+.++..+
T Consensus 162 ~~~--------------------------~~---~-~~~~~---------~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~ 202 (412)
T 3otg_A 162 DTP--------------------------DD---L-TRSIE---------EEVRGLAQRLGLDLPPGRIDGFGNPFIDIF 202 (412)
T ss_dssp CCC--------------------------SH---H-HHHHH---------HHHHHHHHHTTCCCCSSCCGGGGCCEEECS
T ss_pred cCc--------------------------hh---h-hHHHH---------HHHHHHHHHcCCCCCcccccCCCCeEEeeC
Confidence 100 00 0 00000 000011111000 012233444554
Q ss_pred ccccchhHHHHHHhhcCCCeEEecccCCCccCCCCCCCCCCCchhhHhhh-hcCCCCCeEEEEeeCCcccCCHHHHHHHH
Q 047833 223 VEELDKIGLMYFKRKFGRSVWPIGPVLLSTENRGGAGKEYGISTELCKKW-LDTKPYTSVLYVSFGSQNTIATSQMMQLA 301 (473)
Q Consensus 223 ~~~l~~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~V~vs~GS~~~~~~~~~~~~~ 301 (473)
...++.. ...+......+.+..... .....+| ....+++++|++++||......+.+..++
T Consensus 203 ~~~~~~~-----~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~ 264 (412)
T 3otg_A 203 PPSLQEP-----EFRARPRRHELRPVPFAE-------------QGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAI 264 (412)
T ss_dssp CGGGSCH-----HHHTCTTEEECCCCCCCC-------------CCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHH
T ss_pred CHHhcCC-----cccCCCCcceeeccCCCC-------------CCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHH
Confidence 4444422 222222222222221111 1123345 23234577999999999766678888999
Q ss_pred HHHHhCCCceEEEECCCCCCCccccccccCCcEEEecccChHHhhccCCcceeEeccCcchHHHHHhhCCcEEecccccc
Q 047833 302 MALEASGKNFIWVVRPPIGFDINSEIKCSGQGLVVHKWAPQVEILSHRSVSVFLSHCGWNSVLEALSHGVPIIGWPLAAE 381 (473)
Q Consensus 302 ~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~D 381 (473)
+++.+.+.+++|+.+... .. ......++|+.+.+|+|+.++|++++ +||+|||++|++||+++|+|+|++|...|
T Consensus 265 ~~l~~~~~~~~~~~g~~~--~~-~~l~~~~~~v~~~~~~~~~~~l~~ad--~~v~~~g~~t~~Ea~a~G~P~v~~p~~~~ 339 (412)
T 3otg_A 265 DGLAGLDADVLVASGPSL--DV-SGLGEVPANVRLESWVPQAALLPHVD--LVVHHGGSGTTLGALGAGVPQLSFPWAGD 339 (412)
T ss_dssp HHHHTSSSEEEEECCSSC--CC-TTCCCCCTTEEEESCCCHHHHGGGCS--EEEESCCHHHHHHHHHHTCCEEECCCSTT
T ss_pred HHHHcCCCEEEEEECCCC--Ch-hhhccCCCcEEEeCCCCHHHHHhcCc--EEEECCchHHHHHHHHhCCCEEecCCchh
Confidence 999998999999997541 11 12223578999999999999999988 59999999999999999999999999999
Q ss_pred chhhHHHHHHhhcceEEEecCCCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhcccccccCCcHHHHHHHH
Q 047833 382 QFYNSKLLEEEIGVCVEVARGKSSEVLKKDIAAKIELVMNETEKGIELRKNAYEVREIIKNAFKNEENFQGSSVKAMNQF 461 (473)
Q Consensus 382 Q~~nA~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~g~~~~~~~~~ 461 (473)
|..|+..+++. |.|..++. .+++++.|.++|.++|+|+ ++++++.+.++++. ... +..+.++.+
T Consensus 340 q~~~~~~v~~~-g~g~~~~~---~~~~~~~l~~ai~~ll~~~----~~~~~~~~~~~~~~-------~~~-~~~~~~~~~ 403 (412)
T 3otg_A 340 SFANAQAVAQA-GAGDHLLP---DNISPDSVSGAAKRLLAEE----SYRAGARAVAAEIA-------AMP-GPDEVVRLL 403 (412)
T ss_dssp HHHHHHHHHHH-TSEEECCG---GGCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHH-------HSC-CHHHHHTTH
T ss_pred HHHHHHHHHHc-CCEEecCc---ccCCHHHHHHHHHHHHhCH----HHHHHHHHHHHHHh-------cCC-CHHHHHHHH
Confidence 99999999988 99999988 7789999999999999999 89999999988886 334 477888877
Q ss_pred HHHHHh
Q 047833 462 LNAASM 467 (473)
Q Consensus 462 ~~~~~~ 467 (473)
.+.+.+
T Consensus 404 ~~l~~~ 409 (412)
T 3otg_A 404 PGFASR 409 (412)
T ss_dssp HHHHC-
T ss_pred HHHhcc
Confidence 776654
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.97 E-value=1.2e-30 Score=253.48 Aligned_cols=319 Identities=15% Similarity=0.112 Sum_probs=202.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcc--hhhhhccCCCCCCceEEecCCCCCCCCCCCCCCCCCCC
Q 047833 6 ETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLN--LRKLKSSVPQNSSINLLEIPFDSIDHNLPPCTENTDSV 83 (473)
Q Consensus 6 ~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 83 (473)
.||+|..+||.||++|.++||++|++ +||+|+|++...- .+.+++ .++++..++.. ++... ......
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~-~g~~V~~vg~~~g~e~~~v~~-----~g~~~~~i~~~----~~~~~-~~~~~~ 71 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQA-RGYAVHWLGTPRGIENDLVPK-----AGLPLHLIQVS----GLRGK-GLKSLV 71 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHH-TTCEEEEEECSSSTHHHHTGG-----GTCCEEECC------------------
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHh-CCCEEEEEECCchHhhchhhh-----cCCcEEEEECC----CcCCC-CHHHHH
Confidence 48999999999999999999999999 9999999997654 234555 67788877742 22210 000000
Q ss_pred ChhhHHHHHHHHHhhhHHHHHHHHhHhhhcCCCCccEEEECCCcc--hHHHHHHHhCCceEEEecchHHHHHHHhhhhcc
Q 047833 84 PYHLVSKLIEATLSFKPHFKKLVNDLIDEQNGYKPLCIITDMFFG--WCKEIAQEYGIFHAIFIGGGGFGFACYYSLWVN 161 (473)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~--~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~ 161 (473)
.....+. .....+.+++++. +||+||++..+. .+..+|+.+|||+++.-.
T Consensus 72 --~~~~~~~----~~~~~~~~~l~~~-------~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~--------------- 123 (365)
T 3s2u_A 72 --KAPLELL----KSLFQALRVIRQL-------RPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQ--------------- 123 (365)
T ss_dssp ---CHHHHH----HHHHHHHHHHHHH-------CCSEEEECSSSTHHHHHHHHHHTTCCEEEEEC---------------
T ss_pred --HHHHHHH----HHHHHHHHHHHhc-------CCCEEEEcCCcchHHHHHHHHHcCCCEEEEec---------------
Confidence 0111222 2233456788999 999999996555 345789999999997421
Q ss_pred CCCCCCCCCcccCCCCCCCCcCCccccchhhhhcCCCChHHHHHHHHhccccCCcEEEEcCccccchhHHHHHHhhcCCC
Q 047833 162 LPHRNMDSDECVLPDFPEASTIHATQLADYLRVADGSDSFSAILQKVLPQWMNADGILVNTVEELDKIGLMYFKRKFGRS 241 (473)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 241 (473)
...|++.+ +++.+ .++.+ ..++++..+ ...+
T Consensus 124 ----------n~~~G~~n-----------------------r~l~~------~a~~v-~~~~~~~~~---------~~~k 154 (365)
T 3s2u_A 124 ----------NAVAGTAN-----------------------RSLAP------IARRV-CEAFPDTFP---------ASDK 154 (365)
T ss_dssp ----------SSSCCHHH-----------------------HHHGG------GCSEE-EESSTTSSC---------C---
T ss_pred ----------chhhhhHH-----------------------Hhhcc------cccee-eeccccccc---------CcCc
Confidence 01121110 01111 11112 223322111 1145
Q ss_pred eEEecccCCCccCCCCCCCCCCCchhhHhhhhcCCCCCeEEEEeeCCcccCCHHHHHHHHHHHHh----CCCceEEEECC
Q 047833 242 VWPIGPVLLSTENRGGAGKEYGISTELCKKWLDTKPYTSVLYVSFGSQNTIATSQMMQLAMALEA----SGKNFIWVVRP 317 (473)
Q Consensus 242 ~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~----~~~~~i~~~~~ 317 (473)
..++|+........ .. .......++++.|+|..||..... ....+.+++.. .+..+++.+|.
T Consensus 155 ~~~~g~pvr~~~~~---------~~---~~~~~~~~~~~~ilv~gGs~g~~~--~~~~~~~al~~l~~~~~~~vi~~~G~ 220 (365)
T 3s2u_A 155 RLTTGNPVRGELFL---------DA---HARAPLTGRRVNLLVLGGSLGAEP--LNKLLPEALAQVPLEIRPAIRHQAGR 220 (365)
T ss_dssp CEECCCCCCGGGCC---------CT---TSSCCCTTSCCEEEECCTTTTCSH--HHHHHHHHHHTSCTTTCCEEEEECCT
T ss_pred EEEECCCCchhhcc---------ch---hhhcccCCCCcEEEEECCcCCccc--cchhhHHHHHhcccccceEEEEecCc
Confidence 66777655443110 00 011122234678999999987532 22334455554 34567777765
Q ss_pred CCCCCccc---cccccCCcEEEecccChH-HhhccCCcceeEeccCcchHHHHHhhCCcEEecccc----ccchhhHHHH
Q 047833 318 PIGFDINS---EIKCSGQGLVVHKWAPQV-EILSHRSVSVFLSHCGWNSVLEALSHGVPIIGWPLA----AEQFYNSKLL 389 (473)
Q Consensus 318 ~~~~~~~~---~~~~~~~nv~~~~~vp~~-~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~----~DQ~~nA~~v 389 (473)
. +.+. .....+.++.+.+|+++. ++++.++ ++|||+|.+|++|++++|+|+|++|+. .+|..||+.+
T Consensus 221 ~---~~~~~~~~~~~~~~~~~v~~f~~dm~~~l~~aD--lvI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l 295 (365)
T 3s2u_A 221 Q---HAEITAERYRTVAVEADVAPFISDMAAAYAWAD--LVICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFL 295 (365)
T ss_dssp T---THHHHHHHHHHTTCCCEEESCCSCHHHHHHHCS--EEEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHH
T ss_pred c---ccccccceecccccccccccchhhhhhhhccce--EEEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHH
Confidence 4 1111 223456788889999874 7888888 599999999999999999999999973 5899999999
Q ss_pred HHhhcceEEEecCCCCccCHHHHHHHHHHHHcCChhhHHHHHHHHH
Q 047833 390 EEEIGVCVEVARGKSSEVLKKDIAAKIELVMNETEKGIELRKNAYE 435 (473)
Q Consensus 390 ~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~ 435 (473)
++. |+|+.++. .+++++.|.++|.++++|++..++++++|++
T Consensus 296 ~~~-G~a~~l~~---~~~~~~~L~~~i~~ll~d~~~~~~m~~~a~~ 337 (365)
T 3s2u_A 296 VRS-GAGRLLPQ---KSTGAAELAAQLSEVLMHPETLRSMADQARS 337 (365)
T ss_dssp HTT-TSEEECCT---TTCCHHHHHHHHHHHHHCTHHHHHHHHHHHH
T ss_pred HHC-CCEEEeec---CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHh
Confidence 988 99999998 8899999999999999999444444444443
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.95 E-value=6e-28 Score=208.59 Aligned_cols=164 Identities=23% Similarity=0.399 Sum_probs=142.0
Q ss_pred CCchhhHhhhhcCCCCCeEEEEeeCCccc-CCHHHHHHHHHHHHhCCCceEEEECCCCCCCccccccccCCcEEEecccC
Q 047833 263 GISTELCKKWLDTKPYTSVLYVSFGSQNT-IATSQMMQLAMALEASGKNFIWVVRPPIGFDINSEIKCSGQGLVVHKWAP 341 (473)
Q Consensus 263 ~~~~~~~~~~l~~~~~~~~V~vs~GS~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vp 341 (473)
++++.++.+|++..+++++|||++||... .....+..+++++.+.+.+++|+++... ....++|+.+.+|+|
T Consensus 5 ~~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~-------~~~~~~~v~~~~~~~ 77 (170)
T 2o6l_A 5 KPLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK-------PDTLGLNTRLYKWIP 77 (170)
T ss_dssp CCCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC-------CTTCCTTEEEESSCC
T ss_pred CCCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC-------cccCCCcEEEecCCC
Confidence 35788999999877667899999999974 4677888899999888899999997441 123467999999999
Q ss_pred hHHhhccCCcceeEeccCcchHHHHHhhCCcEEeccccccchhhHHHHHHhhcceEEEecCCCCccCHHHHHHHHHHHHc
Q 047833 342 QVEILSHRSVSVFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEIGVCVEVARGKSSEVLKKDIAAKIELVMN 421 (473)
Q Consensus 342 ~~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~nA~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~ 421 (473)
|.+++.|+.+++||||||+||++|++++|+|+|++|...||..||.++++. |+|+.++. .+++.++|.++|.++++
T Consensus 78 ~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~-g~g~~~~~---~~~~~~~l~~~i~~ll~ 153 (170)
T 2o6l_A 78 QNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKAR-GAAVRVDF---NTMSSTDLLNALKRVIN 153 (170)
T ss_dssp HHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTT-TSEEECCT---TTCCHHHHHHHHHHHHH
T ss_pred HHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHc-CCeEEecc---ccCCHHHHHHHHHHHHc
Confidence 999997777778999999999999999999999999999999999999977 99999987 78899999999999999
Q ss_pred CChhhHHHHHHHHHHHHHHH
Q 047833 422 ETEKGIELRKNAYEVREIIK 441 (473)
Q Consensus 422 ~~~~~~~~~~~a~~l~~~~~ 441 (473)
|+ +|+++++++++.++
T Consensus 154 ~~----~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 154 DP----SYKENVMKLSRIQH 169 (170)
T ss_dssp CH----HHHHHHHHHC----
T ss_pred CH----HHHHHHHHHHHHhh
Confidence 99 89999999999886
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.88 E-value=1.1e-20 Score=183.70 Aligned_cols=343 Identities=15% Similarity=0.134 Sum_probs=208.0
Q ss_pred CCCCC-cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcch--hhhhccCCCCCCceEEecCCCCCCCCCCCCC
Q 047833 1 MAQRK-ETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNL--RKLKSSVPQNSSINLLEIPFDSIDHNLPPCT 77 (473)
Q Consensus 1 ~~~~~-~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~--~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 77 (473)
|+.+| +||++++.+..||..+.+.|+++|.+ +||+|++++..... ..+.. .++++..++.. .+..
T Consensus 1 mM~~m~mkIl~~~~~~gG~~~~~~~la~~L~~-~G~~V~v~~~~~~~~~~~~~~-----~g~~~~~~~~~----~~~~-- 68 (364)
T 1f0k_A 1 MMSGQGKRLMVMAGGTGGHVFPGLAVAHHLMA-QGWQVRWLGTADRMEADLVPK-----HGIEIDFIRIS----GLRG-- 68 (364)
T ss_dssp ------CEEEEECCSSHHHHHHHHHHHHHHHT-TTCEEEEEECTTSTHHHHGGG-----GTCEEEECCCC----CCTT--
T ss_pred CCCCCCcEEEEEeCCCccchhHHHHHHHHHHH-cCCEEEEEecCCcchhhhccc-----cCCceEEecCC----ccCc--
Confidence 44444 79999998888999999999999999 99999999976532 23344 46677766642 1111
Q ss_pred CCCCCCChhhHHHHHHHHHhhhHHHHHHHHhHhhhcCCCCccEEEECCCc--chHHHHHHHhCCceEEEecchHHHHHHH
Q 047833 78 ENTDSVPYHLVSKLIEATLSFKPHFKKLVNDLIDEQNGYKPLCIITDMFF--GWCKEIAQEYGIFHAIFIGGGGFGFACY 155 (473)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~ 155 (473)
......+.... ........+.+++++. +||+|+++... ..+..+++.+|+|++......
T Consensus 69 ----~~~~~~~~~~~-~~~~~~~~l~~~l~~~-------~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~------- 129 (364)
T 1f0k_A 69 ----KGIKALIAAPL-RIFNAWRQARAIMKAY-------KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG------- 129 (364)
T ss_dssp ----CCHHHHHTCHH-HHHHHHHHHHHHHHHH-------CCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS-------
T ss_pred ----CccHHHHHHHH-HHHHHHHHHHHHHHhc-------CCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCC-------
Confidence 00000000011 1112334567778888 99999998643 245577888999998642210
Q ss_pred hhhhccCCCCCCCCCcccCCCCCCCCcCCccccchhhhhcCCCChHHHHHHHHhccccCCcEEEEcCccccchhHHHHHH
Q 047833 156 YSLWVNLPHRNMDSDECVLPDFPEASTIHATQLADYLRVADGSDSFSAILQKVLPQWMNADGILVNTVEELDKIGLMYFK 235 (473)
Q Consensus 156 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 235 (473)
.++ ...+++ ....+.++..+.. .
T Consensus 130 ------------------~~~-----------------------~~~~~~------~~~~d~v~~~~~~-~--------- 152 (364)
T 1f0k_A 130 ------------------IAG-----------------------LTNKWL------AKIATKVMQAFPG-A--------- 152 (364)
T ss_dssp ------------------SCC-----------------------HHHHHH------TTTCSEEEESSTT-S---------
T ss_pred ------------------CCc-----------------------HHHHHH------HHhCCEEEecChh-h---------
Confidence 000 000000 1123334433221 1
Q ss_pred hhcCCCeEEecccCCCccCCCCCCCCCCCchhhHhhhhcCCCCCeEEEEeeCCcccCCHHHHHHHHHHHHhC--CCceEE
Q 047833 236 RKFGRSVWPIGPVLLSTENRGGAGKEYGISTELCKKWLDTKPYTSVLYVSFGSQNTIATSQMMQLAMALEAS--GKNFIW 313 (473)
Q Consensus 236 ~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~--~~~~i~ 313 (473)
+ +++..+|........ .. . ...+.+...+++++|++..|+... ......+++++... +.++++
T Consensus 153 --~-~~~~~i~n~v~~~~~--------~~-~-~~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~ 217 (364)
T 1f0k_A 153 --F-PNAEVVGNPVRTDVL--------AL-P-LPQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWH 217 (364)
T ss_dssp --S-SSCEECCCCCCHHHH--------TS-C-CHHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEE
T ss_pred --c-CCceEeCCccchhhc--------cc-c-hhhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEE
Confidence 2 245566543322100 00 0 011222223345678888888764 23334455555543 566677
Q ss_pred EECCCCCCCccc-c--cccc-CCcEEEecccC-hHHhhccCCcceeEeccCcchHHHHHhhCCcEEecccc---ccchhh
Q 047833 314 VVRPPIGFDINS-E--IKCS-GQGLVVHKWAP-QVEILSHRSVSVFLSHCGWNSVLEALSHGVPIIGWPLA---AEQFYN 385 (473)
Q Consensus 314 ~~~~~~~~~~~~-~--~~~~-~~nv~~~~~vp-~~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~---~DQ~~n 385 (473)
..|... ... . .... .++|.+.+|++ -..+++.++ ++|+++|.+++.||+++|+|+|+.|.. .||..|
T Consensus 218 i~G~~~---~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad--~~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~ 292 (364)
T 1f0k_A 218 QSGKGS---QQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWAD--VVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWN 292 (364)
T ss_dssp ECCTTC---HHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCS--EEEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHH
T ss_pred EcCCch---HHHHHHHHhhcCCCceEEecchhhHHHHHHhCC--EEEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHH
Confidence 776541 111 1 1111 25799999994 578888887 499999988999999999999999987 799999
Q ss_pred HHHHHHhhcceEEEecCCCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhcccccccCCcHHHHHHHHHHHH
Q 047833 386 SKLLEEEIGVCVEVARGKSSEVLKKDIAAKIELVMNETEKGIELRKNAYEVREIIKNAFKNEENFQGSSVKAMNQFLNAA 465 (473)
Q Consensus 386 A~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 465 (473)
+..+.+. |.|..++. .+.+.++|.++|.++ |+ +.+++..+-+.+. .+..+..+.++.+++.+
T Consensus 293 ~~~~~~~-g~g~~~~~---~d~~~~~la~~i~~l--~~----~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~y 354 (364)
T 1f0k_A 293 ALPLEKA-GAAKIIEQ---PQLSVDAVANTLAGW--SR----ETLLTMAERARAA--------SIPDATERVANEVSRVA 354 (364)
T ss_dssp HHHHHHT-TSEEECCG---GGCCHHHHHHHHHTC--CH----HHHHHHHHHHHHT--------CCTTHHHHHHHHHHHHH
T ss_pred HHHHHhC-CcEEEecc---ccCCHHHHHHHHHhc--CH----HHHHHHHHHHHHh--------hccCHHHHHHHHHHHHH
Confidence 9999988 99998887 667799999999999 66 3444433333222 23455667777777777
Q ss_pred Hhhh
Q 047833 466 SMVK 469 (473)
Q Consensus 466 ~~~~ 469 (473)
++..
T Consensus 355 ~~~~ 358 (364)
T 1f0k_A 355 RALE 358 (364)
T ss_dssp TTC-
T ss_pred HHHH
Confidence 6544
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.63 E-value=4e-14 Score=130.39 Aligned_cols=116 Identities=11% Similarity=0.075 Sum_probs=87.8
Q ss_pred CCeEEEEeeCCcccCCHHHHHHHHHHHHhCCCceEEEECCCCCCCccc-ccc-ccCCcEEEecccChH-HhhccCCccee
Q 047833 278 YTSVLYVSFGSQNTIATSQMMQLAMALEASGKNFIWVVRPPIGFDINS-EIK-CSGQGLVVHKWAPQV-EILSHRSVSVF 354 (473)
Q Consensus 278 ~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~-~~~-~~~~nv~~~~~vp~~-~ll~~~~v~~~ 354 (473)
..+.|+|++|..... .....+++++.... ++.+++|... ...+. ... ....|+.+..|+++. .+++.++ ++
T Consensus 156 ~~~~ILv~~GG~d~~--~l~~~vl~~L~~~~-~i~vv~G~~~-~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aD--lv 229 (282)
T 3hbm_A 156 KKYDFFICMGGTDIK--NLSLQIASELPKTK-IISIATSSSN-PNLKKLQKFAKLHNNIRLFIDHENIAKLMNESN--KL 229 (282)
T ss_dssp CCEEEEEECCSCCTT--CHHHHHHHHSCTTS-CEEEEECTTC-TTHHHHHHHHHTCSSEEEEESCSCHHHHHHTEE--EE
T ss_pred cCCeEEEEECCCchh--hHHHHHHHHhhcCC-CEEEEECCCc-hHHHHHHHHHhhCCCEEEEeCHHHHHHHHHHCC--EE
Confidence 356899999976432 35556777776543 6888887652 22222 111 123489999999865 6888877 59
Q ss_pred EeccCcchHHHHHhhCCcEEeccccccchhhHHHHHHhhcceEEEec
Q 047833 355 LSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEIGVCVEVAR 401 (473)
Q Consensus 355 I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~nA~~v~~~lG~g~~l~~ 401 (473)
||+|| +|++|+++.|+|+|++|...+|..||+.+++. |+++.+..
T Consensus 230 I~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~-G~~~~~~~ 274 (282)
T 3hbm_A 230 IISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKK-GYEVEYKY 274 (282)
T ss_dssp EEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHT-TCEEECGG
T ss_pred EECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHC-CCEEEcch
Confidence 99999 89999999999999999999999999999988 99998864
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.60 E-value=2e-15 Score=133.32 Aligned_cols=132 Identities=15% Similarity=0.142 Sum_probs=96.1
Q ss_pred CCCCeEEEEeeCCcccCCHHHHHHH-----HHHHHhCC-CceEEEECCCCCCCccc-cccc-------------------
Q 047833 276 KPYTSVLYVSFGSQNTIATSQMMQL-----AMALEASG-KNFIWVVRPPIGFDINS-EIKC------------------- 329 (473)
Q Consensus 276 ~~~~~~V~vs~GS~~~~~~~~~~~~-----~~al~~~~-~~~i~~~~~~~~~~~~~-~~~~------------------- 329 (473)
.++++.|||++||... -.+.+..+ +++|...+ .++++.+|......... ....
T Consensus 25 ~~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~ 103 (224)
T 2jzc_A 25 IIEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEFEHLVQERGGQRESQKIPIDQFGCGDT 103 (224)
T ss_dssp CCCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCCCCCSHHHHHTCEECSCCCSSCTTCTTCS
T ss_pred CCCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchhhHHHHHHhhhcccccccccccccccccc
Confidence 3457899999999842 24444433 48887777 79999998652100110 0000
Q ss_pred --------cCCcEEEecccChH-Hhhc-cCCcceeEeccCcchHHHHHhhCCcEEecccc----ccchhhHHHHHHhhcc
Q 047833 330 --------SGQGLVVHKWAPQV-EILS-HRSVSVFLSHCGWNSVLEALSHGVPIIGWPLA----AEQFYNSKLLEEEIGV 395 (473)
Q Consensus 330 --------~~~nv~~~~~vp~~-~ll~-~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~----~DQ~~nA~~v~~~lG~ 395 (473)
..-++.+.+|+++. ++++ .++ ++|||||.||++|++++|+|+|++|.. .||..||+++++. |+
T Consensus 104 ~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Ad--lvIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~-G~ 180 (224)
T 2jzc_A 104 ARQYVLMNGKLKVIGFDFSTKMQSIIRDYSD--LVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVEL-GY 180 (224)
T ss_dssp CEEEESTTTSSEEEECCSSSSHHHHHHHHCS--CEEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHH-SC
T ss_pred ccccccccCCceEEEeeccchHHHHHHhcCC--EEEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHC-CC
Confidence 11256777888865 8898 888 599999999999999999999999984 4799999999988 99
Q ss_pred eEEEecCCCCccCHHHHHHHHHHH
Q 047833 396 CVEVARGKSSEVLKKDIAAKIELV 419 (473)
Q Consensus 396 g~~l~~~~~~~~~~~~l~~~i~~l 419 (473)
|+.+. .+.|.++|.++
T Consensus 181 ~~~~~--------~~~L~~~i~~l 196 (224)
T 2jzc_A 181 VWSCA--------PTETGLIAGLR 196 (224)
T ss_dssp CCEEC--------SCTTTHHHHHH
T ss_pred EEEcC--------HHHHHHHHHHH
Confidence 87653 35677777776
No 25
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.43 E-value=6.8e-12 Score=121.99 Aligned_cols=158 Identities=11% Similarity=0.086 Sum_probs=96.0
Q ss_pred CeEEEEeeCCcccCCHHHHHHHHHHHHh-----CCCceEEEECCCCCCCccc-ccc-ccCCcEEEecccCh---HHhhcc
Q 047833 279 TSVLYVSFGSQNTIATSQMMQLAMALEA-----SGKNFIWVVRPPIGFDINS-EIK-CSGQGLVVHKWAPQ---VEILSH 348 (473)
Q Consensus 279 ~~~V~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~-~~~-~~~~nv~~~~~vp~---~~ll~~ 348 (473)
++.|+++.|...... .+..+++++.. .+.++++..|.+ ...... ... ...++|.+.+++++ ..+++.
T Consensus 198 ~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~-~~~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~~~ 274 (376)
T 1v4v_A 198 GPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLN-PVVREAVFPVLKGVRNFVLLDPLEYGSMAALMRA 274 (376)
T ss_dssp SCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSC-HHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHT
T ss_pred CCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCC-HHHHHHHHHHhccCCCEEEECCCCHHHHHHHHHh
Confidence 457777777664322 23445555543 256666665532 000011 111 12358999877665 477878
Q ss_pred CCcceeEeccCcchHHHHHhhCCcEEeccccccchhhHHHHHHhhcceEEEecCCCCccCHHHHHHHHHHHHcCChhhHH
Q 047833 349 RSVSVFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEIGVCVEVARGKSSEVLKKDIAAKIELVMNETEKGIE 428 (473)
Q Consensus 349 ~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~nA~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~ 428 (473)
++ +||+.+| |.+.||+++|+|+|+.+...+++.. .+. |.|+.++ .+.++|.++|.++++|+ +
T Consensus 275 ad--~~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~----~~~-g~g~lv~------~d~~~la~~i~~ll~d~----~ 336 (376)
T 1v4v_A 275 SL--LLVTDSG-GLQEEGAALGVPVVVLRNVTERPEG----LKA-GILKLAG------TDPEGVYRVVKGLLENP----E 336 (376)
T ss_dssp EE--EEEESCH-HHHHHHHHTTCCEEECSSSCSCHHH----HHH-TSEEECC------SCHHHHHHHHHHHHTCH----H
T ss_pred Cc--EEEECCc-CHHHHHHHcCCCEEeccCCCcchhh----hcC-CceEECC------CCHHHHHHHHHHHHhCh----H
Confidence 77 5888873 4456999999999999876676663 346 8887653 37899999999999988 3
Q ss_pred HHHHHHHHHHHHHHhcccccccCCcHHHHHHHHHHHH
Q 047833 429 LRKNAYEVREIIKNAFKNEENFQGSSVKAMNQFLNAA 465 (473)
Q Consensus 429 ~~~~a~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 465 (473)
.+++. ++.. ..+ ..++++.+.++.+.+.+
T Consensus 337 ~~~~~---~~~~-~~~----~~~~~~~~i~~~i~~~~ 365 (376)
T 1v4v_A 337 ELSRM---RKAK-NPY----GDGKAGLMVARGVAWRL 365 (376)
T ss_dssp HHHHH---HHSC-CSS----CCSCHHHHHHHHHHHHT
T ss_pred hhhhh---cccC-CCC----CCChHHHHHHHHHHHHh
Confidence 33332 2211 111 44565666666665544
No 26
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.37 E-value=2.1e-10 Score=113.79 Aligned_cols=355 Identities=12% Similarity=0.060 Sum_probs=179.8
Q ss_pred CCCcEEEEEcC-----------CCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhh-ccCCCCCCceEEecCCCCCC
Q 047833 3 QRKETIVLFPF-----------MAQGHIIPFLALALHLEKTNKYTITFVNTPLNLRKLK-SSVPQNSSINLLEIPFDSID 70 (473)
Q Consensus 3 ~~~~~il~~~~-----------~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~~~~ 70 (473)
.+|+||++++. ...|+-..+..|+++|.+ +||+|++++.......-. .... .++++..++..
T Consensus 18 ~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~-~G~~V~v~~~~~~~~~~~~~~~~--~~v~v~~~~~~--- 91 (438)
T 3c48_A 18 GSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAK-QGIEVDIYTRATRPSQGEIVRVA--ENLRVINIAAG--- 91 (438)
T ss_dssp -CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHH-TTCEEEEEEECCCGGGCSEEEEE--TTEEEEEECCS---
T ss_pred cchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHh-cCCEEEEEecCCCCCCccccccc--CCeEEEEecCC---
Confidence 46889999885 246888889999999999 999999998655321110 0001 56666666632
Q ss_pred CCCCCCCCCCCCCChhhHHHHHHHHHhhhHHHHHH-HHhHhhhcCCCCccEEEECCCcc--hHHHHHHHhCCceEEEecc
Q 047833 71 HNLPPCTENTDSVPYHLVSKLIEATLSFKPHFKKL-VNDLIDEQNGYKPLCIITDMFFG--WCKEIAQEYGIFHAIFIGG 147 (473)
Q Consensus 71 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~pD~Vv~d~~~~--~~~~~A~~~giP~v~~~~~ 147 (473)
.......... ...+..+ ...+.+. ++... +||+|++..... .+..+++.+++|+|.....
T Consensus 92 ---~~~~~~~~~~-~~~~~~~-------~~~~~~~~~~~~~------~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~ 154 (438)
T 3c48_A 92 ---PYEGLSKEEL-PTQLAAF-------TGGMLSFTRREKV------TYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHT 154 (438)
T ss_dssp ---CSSSCCGGGG-GGGHHHH-------HHHHHHHHHHHTC------CCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSS
T ss_pred ---CccccchhHH-HHHHHHH-------HHHHHHHHHhccC------CCCEEEeCCccHHHHHHHHHHHcCCCEEEEecC
Confidence 0000000000 0011111 1122222 33330 499999875322 2345678889999886432
Q ss_pred hHHHHHHHhhhhccCCCCCCCCCcccCCCCCCCCcCCccccchhhhhcCCCChHHHHHHHHhccccCCcEEEEcCccccc
Q 047833 148 GGFGFACYYSLWVNLPHRNMDSDECVLPDFPEASTIHATQLADYLRVADGSDSFSAILQKVLPQWMNADGILVNTVEELD 227 (473)
Q Consensus 148 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 227 (473)
..... . .. +........ .....+. ......++.++..+....
T Consensus 155 ~~~~~--------~-------------~~------~~~~~~~~~--------~~~~~~~--~~~~~~~d~ii~~s~~~~- 196 (438)
T 3c48_A 155 LAAVK--------N-------------SY------RDDSDTPES--------EARRICE--QQLVDNADVLAVNTQEEM- 196 (438)
T ss_dssp CHHHH--------S-------------CC----------CCHHH--------HHHHHHH--HHHHHHCSEEEESSHHHH-
T ss_pred Ccccc--------c-------------cc------ccccCCcch--------HHHHHHH--HHHHhcCCEEEEcCHHHH-
Confidence 21100 0 00 000000000 0000010 112334566666654221
Q ss_pred hhHHHHHHhhcC---CCeEEecccCCCccCCCCCCCCCCCchhhHhhhhcCCCCCeEEEEeeCCccc-CCHHHHHHHHHH
Q 047833 228 KIGLMYFKRKFG---RSVWPIGPVLLSTENRGGAGKEYGISTELCKKWLDTKPYTSVLYVSFGSQNT-IATSQMMQLAMA 303 (473)
Q Consensus 228 ~~~~~~~~~~~~---~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~-~~~~~~~~~~~a 303 (473)
+.+...++ .++..+........... ..........+-+...+ +..+++..|+... ...+.+...+..
T Consensus 197 ----~~~~~~~g~~~~k~~vi~ngvd~~~~~~----~~~~~~~~~r~~~~~~~-~~~~i~~~G~~~~~Kg~~~li~a~~~ 267 (438)
T 3c48_A 197 ----QDLMHHYDADPDRISVVSPGADVELYSP----GNDRATERSRRELGIPL-HTKVVAFVGRLQPFKGPQVLIKAVAA 267 (438)
T ss_dssp ----HHHHHHHCCCGGGEEECCCCCCTTTSCC----C----CHHHHHHTTCCS-SSEEEEEESCBSGGGCHHHHHHHHHH
T ss_pred ----HHHHHHhCCChhheEEecCCccccccCC----cccchhhhhHHhcCCCC-CCcEEEEEeeecccCCHHHHHHHHHH
Confidence 22222222 34555543332210000 00001111333333222 3356677788764 233444444444
Q ss_pred HHhC----CCceEEEECCCC--CCCccc-----cccccCCcEEEecccCh---HHhhccCCcceeEec----cCcchHHH
Q 047833 304 LEAS----GKNFIWVVRPPI--GFDINS-----EIKCSGQGLVVHKWAPQ---VEILSHRSVSVFLSH----CGWNSVLE 365 (473)
Q Consensus 304 l~~~----~~~~i~~~~~~~--~~~~~~-----~~~~~~~nv~~~~~vp~---~~ll~~~~v~~~I~H----GG~gt~~e 365 (473)
+.+. +.++++ +|... +..... ......++|.+.+++|+ ..++..+++ +|.- |...++.|
T Consensus 268 l~~~~p~~~~~l~i-~G~~~~~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~E 344 (438)
T 3c48_A 268 LFDRDPDRNLRVII-CGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAME 344 (438)
T ss_dssp HHHHCTTCSEEEEE-ECCBC------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHH
T ss_pred HHhhCCCcceEEEE-EeCCCCCCcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHH
Confidence 4332 344444 44310 001111 11123578999999986 456777775 5543 33458999
Q ss_pred HHhhCCcEEeccccccchhhHHHHHHhhcceEEEecCCCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHH
Q 047833 366 ALSHGVPIIGWPLAAEQFYNSKLLEEEIGVCVEVARGKSSEVLKKDIAAKIELVMNETEKGIELRKNAYEVREII 440 (473)
Q Consensus 366 al~~GvP~l~~P~~~DQ~~nA~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~l~~~~ 440 (473)
|+.+|+|+|+.+. ......+.+. +.|+.++. -+.++++++|.++++|++..+.+.+++++..+.+
T Consensus 345 ama~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~-----~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~ 409 (438)
T 3c48_A 345 AQASGTPVIAARV----GGLPIAVAEG-ETGLLVDG-----HSPHAWADALATLLDDDETRIRMGEDAVEHARTF 409 (438)
T ss_dssp HHHTTCCEEEESC----TTHHHHSCBT-TTEEEESS-----CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCEEecCC----CChhHHhhCC-CcEEECCC-----CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhC
Confidence 9999999999764 3455555544 57877754 4789999999999999855566777777776664
No 27
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.27 E-value=6.1e-09 Score=102.98 Aligned_cols=160 Identities=13% Similarity=0.035 Sum_probs=102.0
Q ss_pred EEEEeeCCcc-c-CCHHHHHHHHHHHHh----CCCceEEEECCCCCCCc--cc---cccccCCcEEEecccChHH---hh
Q 047833 281 VLYVSFGSQN-T-IATSQMMQLAMALEA----SGKNFIWVVRPPIGFDI--NS---EIKCSGQGLVVHKWAPQVE---IL 346 (473)
Q Consensus 281 ~V~vs~GS~~-~-~~~~~~~~~~~al~~----~~~~~i~~~~~~~~~~~--~~---~~~~~~~nv~~~~~vp~~~---ll 346 (473)
.+++..|+.. . ...+.+...+..+.. .+.+++++ |.. ... .. .....++++.+.+|+++.+ ++
T Consensus 252 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~-G~g--~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~ 328 (439)
T 3fro_A 252 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIII-GKG--DPELEGWARSLEEKHGNVKVITEMLSREFVRELY 328 (439)
T ss_dssp EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEE-CCC--CHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHH
T ss_pred cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEE-cCC--ChhHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHH
Confidence 6777889887 4 345555555555555 34555444 322 111 11 1122336677788899754 57
Q ss_pred ccCCcceeEec----cCcchHHHHHhhCCcEEeccccccchhhHHHHHHhhcceEEEecCCCCccCHHHHHHHHHHHHc-
Q 047833 347 SHRSVSVFLSH----CGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEIGVCVEVARGKSSEVLKKDIAAKIELVMN- 421 (473)
Q Consensus 347 ~~~~v~~~I~H----GG~gt~~eal~~GvP~l~~P~~~DQ~~nA~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~- 421 (473)
..+++ +|.- |-..++.||+++|+|+|+... ......+. . |.|..++. -+.+++.++|.++++
T Consensus 329 ~~adv--~v~ps~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e~~~-~-~~g~~~~~-----~d~~~la~~i~~ll~~ 395 (439)
T 3fro_A 329 GSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDIIT-N-ETGILVKA-----GDPGELANAILKALEL 395 (439)
T ss_dssp TTCSE--EEECBSCCSSCHHHHHHHHTTCEEEEESS----THHHHHCC-T-TTCEEECT-----TCHHHHHHHHHHHHHH
T ss_pred HHCCE--EEeCCCCCCccHHHHHHHHCCCCeEEcCC----CCcceeEE-c-CceEEeCC-----CCHHHHHHHHHHHHhc
Confidence 77775 5532 334689999999999999753 34444444 5 78887764 578999999999999
Q ss_pred CChhhHHHHHHHHHHHHHHHHhcccccccCCcHHHHHHHHHHHHHhh
Q 047833 422 ETEKGIELRKNAYEVREIIKNAFKNEENFQGSSVKAMNQFLNAASMV 468 (473)
Q Consensus 422 ~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 468 (473)
+++..+.+.+++++..+.+ +.....+.+++.+++.
T Consensus 396 ~~~~~~~~~~~~~~~~~~~------------s~~~~~~~~~~~~~~~ 430 (439)
T 3fro_A 396 SRSDLSKFRENCKKRAMSF------------SWEKSAERYVKAYTGS 430 (439)
T ss_dssp TTTTTHHHHHHHHHHHHTS------------CHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHHHhhC------------cHHHHHHHHHHHHHHH
Confidence 7756666777777666443 2455666666665543
No 28
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.27 E-value=8.2e-11 Score=114.93 Aligned_cols=130 Identities=14% Similarity=0.141 Sum_probs=82.2
Q ss_pred CCeEEEEeeCCcccCCHHHHHHHHHHHHh-----CCCceEEEECCCCCCCccc-cc-cccCCcEEEecccC---hHHhhc
Q 047833 278 YTSVLYVSFGSQNTIATSQMMQLAMALEA-----SGKNFIWVVRPPIGFDINS-EI-KCSGQGLVVHKWAP---QVEILS 347 (473)
Q Consensus 278 ~~~~V~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~-~~-~~~~~nv~~~~~vp---~~~ll~ 347 (473)
++++|+++.+........ +..+++++.. .+.++|+.++.+ ...... .. ....+++.+.++++ ...+++
T Consensus 229 ~~~~vlv~~hR~~~~~~~-~~~ll~A~~~l~~~~~~~~~v~~~g~~-~~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~ 306 (396)
T 3dzc_A 229 SKKLILVTGHRRESFGGG-FERICQALITTAEQHPECQILYPVHLN-PNVREPVNKLLKGVSNIVLIEPQQYLPFVYLMD 306 (396)
T ss_dssp TSEEEEEECSCBCCCTTH-HHHHHHHHHHHHHHCTTEEEEEECCBC-HHHHHHHHHHTTTCTTEEEECCCCHHHHHHHHH
T ss_pred CCCEEEEEECCcccchhH-HHHHHHHHHHHHHhCCCceEEEEeCCC-hHHHHHHHHHHcCCCCEEEeCCCCHHHHHHHHH
Confidence 466777776433332222 4456666554 356777766422 000001 11 12246898888876 356777
Q ss_pred cCCcceeEeccCcchHHHHHhhCCcEEeccccccchhhHHHHHHhhcceEEEecCCCCccCHHHHHHHHHHHHcCC
Q 047833 348 HRSVSVFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEIGVCVEVARGKSSEVLKKDIAAKIELVMNET 423 (473)
Q Consensus 348 ~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~nA~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~~~ 423 (473)
.++ +||+-.| |.+.||.++|+|+|+..-..++++ +.+. |.++.+. .+.++|.++|.++++|+
T Consensus 307 ~ad--~vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~e----~v~~-G~~~lv~------~d~~~l~~ai~~ll~d~ 368 (396)
T 3dzc_A 307 RAH--IILTDSG-GIQEEAPSLGKPVLVMRETTERPE----AVAA-GTVKLVG------TNQQQICDALSLLLTDP 368 (396)
T ss_dssp HCS--EEEESCS-GGGTTGGGGTCCEEECCSSCSCHH----HHHH-TSEEECT------TCHHHHHHHHHHHHHCH
T ss_pred hcC--EEEECCc-cHHHHHHHcCCCEEEccCCCcchH----HHHc-CceEEcC------CCHHHHHHHHHHHHcCH
Confidence 777 5899887 666799999999999865555532 3447 8775442 26899999999999998
No 29
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.25 E-value=6.2e-09 Score=101.39 Aligned_cols=351 Identities=10% Similarity=-0.014 Sum_probs=186.8
Q ss_pred CCCCCcEEEEEcC--C--CccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhc-cCCCCCCceEEecCCCCCCCCCCC
Q 047833 1 MAQRKETIVLFPF--M--AQGHIIPFLALALHLEKTNKYTITFVNTPLNLRKLKS-SVPQNSSINLLEIPFDSIDHNLPP 75 (473)
Q Consensus 1 ~~~~~~~il~~~~--~--~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v~~-~~~~~~~~~~~~~~~~~~~~~l~~ 75 (473)
|+. |+||++++. + ..|.-.-+..|++.| +||+|++++.......... ... .++.+..++.. ..
T Consensus 1 M~~-~mkIl~v~~~~~p~~gG~~~~~~~l~~~L---~g~~v~v~~~~~~~~~~~~~~~~--~~~~~~~~~~~---~~--- 68 (394)
T 3okp_A 1 MSA-SRKTLVVTNDFPPRIGGIQSYLRDFIATQ---DPESIVVFASTQNAEEAHAYDKT--LDYEVIRWPRS---VM--- 68 (394)
T ss_dssp ----CCCEEEEESCCTTSCSHHHHHHHHHHTTS---CGGGEEEEEECSSHHHHHHHHTT--CSSEEEEESSS---SC---
T ss_pred CCC-CceEEEEeCccCCccchHHHHHHHHHHHh---cCCeEEEEECCCCccchhhhccc--cceEEEEcccc---cc---
Confidence 443 567887764 2 457777777888888 5999999997765431111 011 56677766632 00
Q ss_pred CCCCCCCCChhhHHHHHHHHHhhhHHHHHHHHhHhhhcCCCCccEEEECCCcc--hHHHHHHHhCCceEEEecchHHHHH
Q 047833 76 CTENTDSVPYHLVSKLIEATLSFKPHFKKLVNDLIDEQNGYKPLCIITDMFFG--WCKEIAQEYGIFHAIFIGGGGFGFA 153 (473)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~--~~~~~A~~~giP~v~~~~~~~~~~~ 153 (473)
... . .....+.+++++. +||+|++..... ....+++.+|+|.+++.......
T Consensus 69 -------~~~---~-------~~~~~l~~~~~~~-------~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~-- 122 (394)
T 3okp_A 69 -------LPT---P-------TTAHAMAEIIRER-------EIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEV-- 122 (394)
T ss_dssp -------CSC---H-------HHHHHHHHHHHHT-------TCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHH--
T ss_pred -------ccc---h-------hhHHHHHHHHHhc-------CCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchh--
Confidence 010 0 2234556778888 999999875443 34566888999855532211100
Q ss_pred HHhhhhccCCCCCCCCCcccCCCCCCCCcCCccccchhhhhcCCCChHHHHHHHHhccccCCcEEEEcCccccchhHHHH
Q 047833 154 CYYSLWVNLPHRNMDSDECVLPDFPEASTIHATQLADYLRVADGSDSFSAILQKVLPQWMNADGILVNTVEELDKIGLMY 233 (473)
Q Consensus 154 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 233 (473)
. . ........... .....++.++..+.. ..+.
T Consensus 123 ----~------------------------~------------~~~~~~~~~~~---~~~~~~d~ii~~s~~-----~~~~ 154 (394)
T 3okp_A 123 ----G------------------------W------------SMLPGSRQSLR---KIGTEVDVLTYISQY-----TLRR 154 (394)
T ss_dssp ----H------------------------H------------TTSHHHHHHHH---HHHHHCSEEEESCHH-----HHHH
T ss_pred ----h------------------------h------------hhcchhhHHHH---HHHHhCCEEEEcCHH-----HHHH
Confidence 0 0 00000111111 112345556666532 2222
Q ss_pred HHhhcC--CCeEEecccCCCccCCCCCCCCCCCchhhHhhhhcCCCCCeEEEEeeCCccc-CCHHHHHHHHHHHHh--CC
Q 047833 234 FKRKFG--RSVWPIGPVLLSTENRGGAGKEYGISTELCKKWLDTKPYTSVLYVSFGSQNT-IATSQMMQLAMALEA--SG 308 (473)
Q Consensus 234 ~~~~~~--~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~-~~~~~~~~~~~al~~--~~ 308 (473)
+...++ .++..+..-....... .........+.+.+... ++..+++..|+... ...+.+...+..+.+ .+
T Consensus 155 ~~~~~~~~~~~~vi~ngv~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~ 229 (394)
T 3okp_A 155 FKSAFGSHPTFEHLPSGVDVKRFT----PATPEDKSATRKKLGFT-DTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPD 229 (394)
T ss_dssp HHHHHCSSSEEEECCCCBCTTTSC----CCCHHHHHHHHHHTTCC-TTCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTT
T ss_pred HHHhcCCCCCeEEecCCcCHHHcC----CCCchhhHHHHHhcCCC-cCceEEEEEeccccccCHHHHHHHHHHHHhhCCC
Confidence 333332 3555554332221000 00011123333333333 23356677788754 234444444444433 35
Q ss_pred CceEEEECCCCCCCccc---cccccCCcEEEecccChHH---hhccCCcceeEe-----------ccCcchHHHHHhhCC
Q 047833 309 KNFIWVVRPPIGFDINS---EIKCSGQGLVVHKWAPQVE---ILSHRSVSVFLS-----------HCGWNSVLEALSHGV 371 (473)
Q Consensus 309 ~~~i~~~~~~~~~~~~~---~~~~~~~nv~~~~~vp~~~---ll~~~~v~~~I~-----------HGG~gt~~eal~~Gv 371 (473)
.+++++-... .... ......+++.+.+++|+.+ ++..+++ +|. -|...++.||+++|+
T Consensus 230 ~~l~i~G~g~---~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~ 304 (394)
T 3okp_A 230 AQLLIVGSGR---YESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGV 304 (394)
T ss_dssp CEEEEECCCT---THHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTC
T ss_pred eEEEEEcCch---HHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCC
Confidence 5665543221 1111 1123347899999998655 5667775 665 455578999999999
Q ss_pred cEEeccccccchhhHHHHHHhhcceEEEecCCCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhcccccccC
Q 047833 372 PIIGWPLAAEQFYNSKLLEEEIGVCVEVARGKSSEVLKKDIAAKIELVMNETEKGIELRKNAYEVREIIKNAFKNEENFQ 451 (473)
Q Consensus 372 P~l~~P~~~DQ~~nA~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~ 451 (473)
|+|+.+.. .....+. . |.|..++. -+.+++.++|.++++|++..+.+.+++++..+.-
T Consensus 305 PvI~~~~~----~~~e~i~-~-~~g~~~~~-----~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~----------- 362 (394)
T 3okp_A 305 PVIAGTSG----GAPETVT-P-ATGLVVEG-----SDVDKLSELLIELLDDPIRRAAMGAAGRAHVEAE----------- 362 (394)
T ss_dssp CEEECSST----TGGGGCC-T-TTEEECCT-----TCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH-----------
T ss_pred CEEEeCCC----ChHHHHh-c-CCceEeCC-----CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh-----------
Confidence 99997653 2333333 5 66666654 4789999999999999854455666665544331
Q ss_pred CcHHHHHHHHHHHHHhhh
Q 047833 452 GSSVKAMNQFLNAASMVK 469 (473)
Q Consensus 452 g~~~~~~~~~~~~~~~~~ 469 (473)
-+.....+.+++.+++..
T Consensus 363 ~s~~~~~~~~~~~~~~~~ 380 (394)
T 3okp_A 363 WSWEIMGERLTNILQSEP 380 (394)
T ss_dssp TBHHHHHHHHHHHHHSCC
T ss_pred CCHHHHHHHHHHHHHHhc
Confidence 124556666666665543
No 30
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.24 E-value=1.3e-10 Score=113.66 Aligned_cols=161 Identities=9% Similarity=0.083 Sum_probs=100.3
Q ss_pred CCeEEEEeeCCcccCCHHHHHHHHHHHHh-----CCCceEEEECCCCCCCccc--cc-cccCCcEEEecccCh---HHhh
Q 047833 278 YTSVLYVSFGSQNTIATSQMMQLAMALEA-----SGKNFIWVVRPPIGFDINS--EI-KCSGQGLVVHKWAPQ---VEIL 346 (473)
Q Consensus 278 ~~~~V~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~--~~-~~~~~nv~~~~~vp~---~~ll 346 (473)
+++.++++.|....... .+..+++++.. .+.++|+..+.+ ..... .. ....+++.+.+++++ ..++
T Consensus 223 ~~~~vlv~~~r~~~~~~-~l~~ll~a~~~l~~~~~~~~~v~~~~~~--~~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~ 299 (403)
T 3ot5_A 223 DNRLILMTAHRRENLGE-PMQGMFEAVREIVESREDTELVYPMHLN--PAVREKAMAILGGHERIHLIEPLDAIDFHNFL 299 (403)
T ss_dssp TCEEEEECCCCHHHHTT-HHHHHHHHHHHHHHHCTTEEEEEECCSC--HHHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCCEEEEEeCcccccCc-HHHHHHHHHHHHHHhCCCceEEEecCCC--HHHHHHHHHHhCCCCCEEEeCCCCHHHHHHHH
Confidence 45678887665332221 23444555443 356777766432 00011 11 122368999999874 4567
Q ss_pred ccCCcceeEeccCcchHHHHHhhCCcEEeccccccchhhHHHHHHhhcceEEEecCCCCccCHHHHHHHHHHHHcCChhh
Q 047833 347 SHRSVSVFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEIGVCVEVARGKSSEVLKKDIAAKIELVMNETEKG 426 (473)
Q Consensus 347 ~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~nA~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~ 426 (473)
+.++ ++|+-.|. .+.||..+|+|+|++|-..++++. .+. |.|+.+. .+.++|.++|.++++|+
T Consensus 300 ~~ad--~vv~~SGg-~~~EA~a~g~PvV~~~~~~~~~e~----v~~-g~~~lv~------~d~~~l~~ai~~ll~~~--- 362 (403)
T 3ot5_A 300 RKSY--LVFTDSGG-VQEEAPGMGVPVLVLRDTTERPEG----IEA-GTLKLIG------TNKENLIKEALDLLDNK--- 362 (403)
T ss_dssp HHEE--EEEECCHH-HHHHGGGTTCCEEECCSSCSCHHH----HHH-TSEEECC------SCHHHHHHHHHHHHHCH---
T ss_pred HhcC--EEEECCcc-HHHHHHHhCCCEEEecCCCcchhh----eeC-CcEEEcC------CCHHHHHHHHHHHHcCH---
Confidence 6766 58887642 236999999999999766666652 347 8776553 27899999999999988
Q ss_pred HHHHHHHHHHHHHHHHhcccccccCCcHHHHHHHHHHHHHh
Q 047833 427 IELRKNAYEVREIIKNAFKNEENFQGSSVKAMNQFLNAASM 467 (473)
Q Consensus 427 ~~~~~~a~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 467 (473)
..+++. ++..+ .. .+++++.+.++.+.+.+..
T Consensus 363 -~~~~~m---~~~~~-~~----g~~~aa~rI~~~l~~~l~~ 394 (403)
T 3ot5_A 363 -ESHDKM---AQAAN-PY----GDGFAANRILAAIKSHFEE 394 (403)
T ss_dssp -HHHHHH---HHSCC-TT----CCSCHHHHHHHHHHHHHTC
T ss_pred -HHHHHH---HhhcC-cc----cCCcHHHHHHHHHHHHhCC
Confidence 444332 22211 12 6788888888888777753
No 31
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.22 E-value=5e-09 Score=102.57 Aligned_cols=324 Identities=11% Similarity=0.018 Sum_probs=167.9
Q ss_pred CCcEEEEEcCC---C-ccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhccCCCCCCceEEecCCCCCCCCCCCCCCC
Q 047833 4 RKETIVLFPFM---A-QGHIIPFLALALHLEKTNKYTITFVNTPLNLRKLKSSVPQNSSINLLEIPFDSIDHNLPPCTEN 79 (473)
Q Consensus 4 ~~~~il~~~~~---~-~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 79 (473)
+|+||++++.. . .|.-.-+..++++|.+ +||+|++++.............. .+ ++..++.. . .
T Consensus 19 ~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~-~G~~V~v~~~~~~~~~~~~~~~~-~~-~~~~~~~~-------~--~- 85 (406)
T 2gek_A 19 SHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRD-AGHEVSVLAPASPHVKLPDYVVS-GG-KAVPIPYN-------G--S- 85 (406)
T ss_dssp --CEEEEECSSCTTSCCHHHHHHHHHHHHHHH-TTCEEEEEESCCTTSCCCTTEEE-CC-CCC-----------------
T ss_pred CcceEEEEeccCCCCCCcHHHHHHHHHHHHHH-CCCeEEEEecCCccccCCccccc-CC-cEEecccc-------C--C-
Confidence 57899987742 2 5666889999999999 99999999976643211110000 01 11111110 0 0
Q ss_pred CCCCChhhHHHHHHHHHhhhHHHHHHHHhHhhhcCCCCccEEEECCCcc--hHHHHHHHhCCceEEEecchHHHHHHHhh
Q 047833 80 TDSVPYHLVSKLIEATLSFKPHFKKLVNDLIDEQNGYKPLCIITDMFFG--WCKEIAQEYGIFHAIFIGGGGFGFACYYS 157 (473)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~--~~~~~A~~~giP~v~~~~~~~~~~~~~~~ 157 (473)
...... .......+.+++++. +||+|++..... .+..+++..++|+|.......
T Consensus 86 ~~~~~~---------~~~~~~~l~~~l~~~-------~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~-------- 141 (406)
T 2gek_A 86 VARLRF---------GPATHRKVKKWIAEG-------DFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTST-------- 141 (406)
T ss_dssp -----C---------CHHHHHHHHHHHHHH-------CCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCC--------
T ss_pred cccccc---------cHHHHHHHHHHHHhc-------CCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcc--------
Confidence 000000 001224566778887 999999885443 344667777999998643210
Q ss_pred hhccCCCCCCCCCcccCCCCCCCCcCCccccchhhhhcCCCChHHHHHHHHh-ccccCCcEEEEcCccccchhHHHHHHh
Q 047833 158 LWVNLPHRNMDSDECVLPDFPEASTIHATQLADYLRVADGSDSFSAILQKVL-PQWMNADGILVNTVEELDKIGLMYFKR 236 (473)
Q Consensus 158 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~ 236 (473)
+ .... ...+.+.. .....++.++..+.. ..+.+..
T Consensus 142 --------------------~------~~~~-------------~~~~~~~~~~~~~~~d~ii~~s~~-----~~~~~~~ 177 (406)
T 2gek_A 142 --------------------T------KSLT-------------LSVFQGILRPYHEKIIGRIAVSDL-----ARRWQME 177 (406)
T ss_dssp --------------------C------SHHH-------------HHHHHSTTHHHHTTCSEEEESSHH-----HHHHHHH
T ss_pred --------------------h------hhhh-------------HHHHHHHHHHHHhhCCEEEECCHH-----HHHHHHH
Confidence 0 0000 00000000 123445666666532 2222333
Q ss_pred hcCCCeEEecccCCCccCCCCCCCCCCCchhhHhhhhcCCCCCeEEEEeeCCc-cc-CCHHHHHHHHHHHHh--CCCceE
Q 047833 237 KFGRSVWPIGPVLLSTENRGGAGKEYGISTELCKKWLDTKPYTSVLYVSFGSQ-NT-IATSQMMQLAMALEA--SGKNFI 312 (473)
Q Consensus 237 ~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~-~~-~~~~~~~~~~~al~~--~~~~~i 312 (473)
.++.....+........... .... ..... +..+++..|+. .. ...+.+...+..+.+ .+.+++
T Consensus 178 ~~~~~~~vi~~~v~~~~~~~------~~~~------~~~~~-~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~ 244 (406)
T 2gek_A 178 ALGSDAVEIPNGVDVASFAD------APLL------DGYPR-EGRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEIL 244 (406)
T ss_dssp HHSSCEEECCCCBCHHHHHT------CCCC------TTCSC-SSCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEE
T ss_pred hcCCCcEEecCCCChhhcCC------Cchh------hhccC-CCeEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEE
Confidence 44332223332111110000 0000 00001 12466677887 43 233444334444433 245555
Q ss_pred EEECCCCCCCccc-c--ccccCCcEEEecccCh---HHhhccCCcceeEe----ccCcc-hHHHHHhhCCcEEecccccc
Q 047833 313 WVVRPPIGFDINS-E--IKCSGQGLVVHKWAPQ---VEILSHRSVSVFLS----HCGWN-SVLEALSHGVPIIGWPLAAE 381 (473)
Q Consensus 313 ~~~~~~~~~~~~~-~--~~~~~~nv~~~~~vp~---~~ll~~~~v~~~I~----HGG~g-t~~eal~~GvP~l~~P~~~D 381 (473)
++ |.. .. .. . .....++|.+.+++++ ..++..+++ +|. +.|++ ++.||+++|+|+|+.+.
T Consensus 245 i~-G~~--~~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~--- 315 (406)
T 2gek_A 245 IV-GRG--DE-DELREQAGDLAGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL--- 315 (406)
T ss_dssp EE-SCS--CH-HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC---
T ss_pred EE-cCC--cH-HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC---
Confidence 44 332 11 11 1 1122678999999996 477888886 553 34544 89999999999999765
Q ss_pred chhhHHHHHHhhcceEEEecCCCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHH
Q 047833 382 QFYNSKLLEEEIGVCVEVARGKSSEVLKKDIAAKIELVMNETEKGIELRKNAYEVR 437 (473)
Q Consensus 382 Q~~nA~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~l~ 437 (473)
......+.+. +.|..++. -+.+++.++|.++++|++..+.+.+++++..
T Consensus 316 -~~~~e~i~~~-~~g~~~~~-----~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~ 364 (406)
T 2gek_A 316 -DAFRRVLADG-DAGRLVPV-----DDADGMAAALIGILEDDQLRAGYVARASERV 364 (406)
T ss_dssp -HHHHHHHTTT-TSSEECCT-----TCHHHHHHHHHHHHHCHHHHHHHHHHHHHHG
T ss_pred -CcHHHHhcCC-CceEEeCC-----CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 4555566644 57777654 4789999999999999833334445554443
No 32
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.22 E-value=2.2e-10 Score=111.54 Aligned_cols=130 Identities=14% Similarity=0.127 Sum_probs=83.6
Q ss_pred CCeEEEEeeCCcccCCHHHHHHHHHHHHh-----CCCceEEEECCCCCCCccc-ccc-ccCCcEEEecccCh---HHhhc
Q 047833 278 YTSVLYVSFGSQNTIATSQMMQLAMALEA-----SGKNFIWVVRPPIGFDINS-EIK-CSGQGLVVHKWAPQ---VEILS 347 (473)
Q Consensus 278 ~~~~V~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~-~~~-~~~~nv~~~~~vp~---~~ll~ 347 (473)
+++.|+++.|+.....+ .+..+++++.. .+.++++..+.+ ...... ... ...++|.+.+++++ ..+++
T Consensus 204 ~~~~vl~~~gr~~~~~k-g~~~li~a~~~l~~~~~~~~l~i~~g~~-~~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~~ 281 (384)
T 1vgv_A 204 DKKMILVTGHRRESFGR-GFEEICHALADIATTHQDIQIVYPVHLN-PNVREPVNRILGHVKNVILIDPQEYLPFVWLMN 281 (384)
T ss_dssp TSEEEEEECCCBSSCCH-HHHHHHHHHHHHHHHCTTEEEEEECCBC-HHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHH
T ss_pred CCCEEEEEeCCccccch-HHHHHHHHHHHHHhhCCCeEEEEEcCCC-HHHHHHHHHHhhcCCCEEEeCCCCHHHHHHHHH
Confidence 45678888887764322 23344444433 245666654422 000011 111 12368998777764 56677
Q ss_pred cCCcceeEeccCcchHHHHHhhCCcEEeccccccchhhHHHHHHhhcceEEEecCCCCccCHHHHHHHHHHHHcCC
Q 047833 348 HRSVSVFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEIGVCVEVARGKSSEVLKKDIAAKIELVMNET 423 (473)
Q Consensus 348 ~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~nA~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~~~ 423 (473)
.+++ ||+.+| |.+.||+++|+|+|+.+..++.++ +.+. |.|+.++ . +.++|.++|.++++|+
T Consensus 282 ~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~e----~v~~-g~g~lv~-----~-d~~~la~~i~~ll~d~ 343 (384)
T 1vgv_A 282 HAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTERPE----AVTA-GTVRLVG-----T-DKQRIVEEVTRLLKDE 343 (384)
T ss_dssp HCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSCHH----HHHH-TSEEEEC-----S-SHHHHHHHHHHHHHCH
T ss_pred hCcE--EEECCc-chHHHHHHcCCCEEEccCCCCcch----hhhC-CceEEeC-----C-CHHHHHHHHHHHHhCh
Confidence 8775 888875 458899999999999987544433 3447 8887764 2 7899999999999988
No 33
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.13 E-value=9.3e-09 Score=103.77 Aligned_cols=97 Identities=16% Similarity=0.030 Sum_probs=68.3
Q ss_pred CCcEEEecccChH---HhhccC----CcceeEec----cCcchHHHHHhhCCcEEeccccccchhhHHHHHHhhcceEEE
Q 047833 331 GQGLVVHKWAPQV---EILSHR----SVSVFLSH----CGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEIGVCVEV 399 (473)
Q Consensus 331 ~~nv~~~~~vp~~---~ll~~~----~v~~~I~H----GG~gt~~eal~~GvP~l~~P~~~DQ~~nA~~v~~~lG~g~~l 399 (473)
.++|.+.+++|+. .+++.+ ++ +|.- |--.++.||+++|+|+|+... ......+... ..|..+
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~-~~g~l~ 406 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEILDGG-KYGVLV 406 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHTGGG-TSSEEE
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHhcCC-ceEEEe
Confidence 5789999999864 456666 64 5532 334589999999999999853 3445555533 478877
Q ss_pred ecCCCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHH
Q 047833 400 ARGKSSEVLKKDIAAKIELVMNETEKGIELRKNAYEVREI 439 (473)
Q Consensus 400 ~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~l~~~ 439 (473)
+. -+.++++++|.++++|++..+.+.++|++..+.
T Consensus 407 ~~-----~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~ 441 (499)
T 2r60_A 407 DP-----EDPEDIARGLLKAFESEETWSAYQEKGKQRVEE 441 (499)
T ss_dssp CT-----TCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred CC-----CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 64 478999999999999984444566666554443
No 34
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.10 E-value=3.8e-08 Score=95.98 Aligned_cols=331 Identities=12% Similarity=0.089 Sum_probs=169.9
Q ss_pred CcEEEEEcCCC-ccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhccCCCCCCceEEecCCCCCCCCCCCCCCCCCCC
Q 047833 5 KETIVLFPFMA-QGHIIPFLALALHLEKTNKYTITFVNTPLNLRKLKSSVPQNSSINLLEIPFDSIDHNLPPCTENTDSV 83 (473)
Q Consensus 5 ~~~il~~~~~~-~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 83 (473)
+.++....+|. .|.-.-...|+++|.+ +||+|++++....... .. .. .++.+..++.. ..+. ....
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~-~G~~V~v~~~~~~~~~-~~-~~--~~i~~~~~~~~----~~~~----~~~~ 81 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAE-RGHEIHFITSGLPFRL-NK-VY--PNIYFHEVTVN----QYSV----FQYP 81 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHH-TTCEEEEECSSCC-----C-CC--TTEEEECCCCC------------CCSC
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHh-CCCEEEEEeCCCCCcc-cc-cC--CceEEEecccc----cccc----cccc
Confidence 45677666664 4566778899999999 9999999987543211 11 11 55666555432 1110 0111
Q ss_pred ChhhHHHHHHHHHhhhHHHHHHHHhHhhhcCCCCccEEEECCCcch--HHHHHH-Hh--CCceEEEecchHHHHHHHhhh
Q 047833 84 PYHLVSKLIEATLSFKPHFKKLVNDLIDEQNGYKPLCIITDMFFGW--CKEIAQ-EY--GIFHAIFIGGGGFGFACYYSL 158 (473)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~~--~~~~A~-~~--giP~v~~~~~~~~~~~~~~~~ 158 (473)
.. .+ .....+.+++++. +||+|++...... ...++. .+ ++|+|.........
T Consensus 82 ~~----~~-----~~~~~l~~~l~~~-------~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~------- 138 (394)
T 2jjm_A 82 PY----DL-----ALASKMAEVAQRE-------NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDIT------- 138 (394)
T ss_dssp CH----HH-----HHHHHHHHHHHHH-------TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHH-------
T ss_pred cc----cH-----HHHHHHHHHHHHc-------CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCccc-------
Confidence 10 10 1223456777787 9999999754332 233444 33 59988764321100
Q ss_pred hccCCCCCCCCCcccCCCCCCCCcCCccccchhhhhcCCCChHHHHHHHHhccccCCcEEEEcCccccchhHHHHHHhhc
Q 047833 159 WVNLPHRNMDSDECVLPDFPEASTIHATQLADYLRVADGSDSFSAILQKVLPQWMNADGILVNTVEELDKIGLMYFKRKF 238 (473)
Q Consensus 159 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 238 (473)
.. .... . . ....+. ....++.++..+.. ..+.+...+
T Consensus 139 --~~-------------~~~~---~-~-------------~~~~~~------~~~~ad~ii~~s~~-----~~~~~~~~~ 175 (394)
T 2jjm_A 139 --VL-------------GSDP---S-L-------------NNLIRF------GIEQSDVVTAVSHS-----LINETHELV 175 (394)
T ss_dssp --TT-------------TTCT---T-T-------------HHHHHH------HHHHSSEEEESCHH-----HHHHHHHHT
T ss_pred --cc-------------CCCH---H-H-------------HHHHHH------HHhhCCEEEECCHH-----HHHHHHHhh
Confidence 00 0000 0 0 001111 12334556555532 122233333
Q ss_pred C--CCeEEecccCCCccCCCCCCCCCCCchhhHhhhhcCCCCCeEEEEeeCCccc-CCHHHHHHHHHHHHh-CCCceEEE
Q 047833 239 G--RSVWPIGPVLLSTENRGGAGKEYGISTELCKKWLDTKPYTSVLYVSFGSQNT-IATSQMMQLAMALEA-SGKNFIWV 314 (473)
Q Consensus 239 ~--~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~-~~~~~~~~~~~al~~-~~~~~i~~ 314 (473)
+ .++..+..-...... .......+.+-+... ++..+++..|+... ...+.+...+..+.+ .+.+++++
T Consensus 176 ~~~~~~~vi~ngv~~~~~-------~~~~~~~~~~~~~~~-~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~ 247 (394)
T 2jjm_A 176 KPNKDIQTVYNFIDERVY-------FKRDMTQLKKEYGIS-ESEKILIHISNFRKVKRVQDVVQAFAKIVTEVDAKLLLV 247 (394)
T ss_dssp CCSSCEEECCCCCCTTTC-------CCCCCHHHHHHTTCC----CEEEEECCCCGGGTHHHHHHHHHHHHHSSCCEEEEE
T ss_pred CCcccEEEecCCccHHhc-------CCcchHHHHHHcCCC-CCCeEEEEeeccccccCHHHHHHHHHHHHhhCCCEEEEE
Confidence 2 356666443322200 011122333333321 23345666788764 233443333333333 34555444
Q ss_pred ECCCCCCCccc-----cccccCCcEEEecccC-hHHhhccCCcceeE----eccCcchHHHHHhhCCcEEeccccccchh
Q 047833 315 VRPPIGFDINS-----EIKCSGQGLVVHKWAP-QVEILSHRSVSVFL----SHCGWNSVLEALSHGVPIIGWPLAAEQFY 384 (473)
Q Consensus 315 ~~~~~~~~~~~-----~~~~~~~nv~~~~~vp-~~~ll~~~~v~~~I----~HGG~gt~~eal~~GvP~l~~P~~~DQ~~ 384 (473)
|.. ..... ......++|.+.++.. -..++..+++ +| ..|..+++.||+.+|+|+|+.+.. .
T Consensus 248 -G~g--~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~ 318 (394)
T 2jjm_A 248 -GDG--PEFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVG----G 318 (394)
T ss_dssp -CCC--TTHHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCT----T
T ss_pred -CCc--hHHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCC----C
Confidence 322 11111 1112246788777754 4677888775 66 445567899999999999998753 2
Q ss_pred hHHHHHHhhcceEEEecCCCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHH
Q 047833 385 NSKLLEEEIGVCVEVARGKSSEVLKKDIAAKIELVMNETEKGIELRKNAYEVR 437 (473)
Q Consensus 385 nA~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~l~ 437 (473)
....+.+. +.|..++. -+.+++.++|.++++|++..+.+.+++++..
T Consensus 319 ~~e~v~~~-~~g~~~~~-----~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~ 365 (394)
T 2jjm_A 319 IPEVIQHG-DTGYLCEV-----GDTTGVADQAIQLLKDEELHRNMGERARESV 365 (394)
T ss_dssp STTTCCBT-TTEEEECT-----TCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred hHHHhhcC-CceEEeCC-----CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 33334433 56777754 4789999999999999844445666665554
No 35
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.08 E-value=2.5e-09 Score=103.61 Aligned_cols=352 Identities=12% Similarity=0.062 Sum_probs=186.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchh-hhhccCCCCCCceEEecCCCCCCCCCCCCCCCCCC
Q 047833 4 RKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLR-KLKSSVPQNSSINLLEIPFDSIDHNLPPCTENTDS 82 (473)
Q Consensus 4 ~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 82 (473)
+|.|++++. |++-.+.-+-.|.++|++ + +++.++.+....+ .+..... .++.+ +.+ +. .+..+ ...
T Consensus 8 ~~~~~~~v~-GtRpe~~k~~p~~~~l~~-~-~~~~~~~tgqh~~~~~~~~~~--~~~~i---~~~-~~-~l~~~---~~~ 74 (385)
T 4hwg_A 8 HMLKVMTIV-GTRPELIKLCCVISEFDK-H-TKHILVHTGQNYAYELNQVFF--DDMGI---RKP-DY-FLEVA---ADN 74 (385)
T ss_dssp CCCEEEEEE-CSHHHHHHHHHHHHHHHH-H-SEEEEEECSCHHHHHHTHHHH--C-CCC---CCC-SE-ECCCC---CCC
T ss_pred hhhheeEEE-EcCHhHHHHHHHHHHHHh-c-CCEEEEEeCCCCChhHHHHHH--hhCCC---CCC-ce-ecCCC---CCC
Confidence 467777665 799999999999999999 8 8877776665543 2222111 22222 111 00 11110 011
Q ss_pred CChhhHHHHHHHHHhhhHHHHHHHHhHhhhcCCCCccEEEEC--CCcchHHHHHHHhCCceEEEecchHHHHHHHhhhhc
Q 047833 83 VPYHLVSKLIEATLSFKPHFKKLVNDLIDEQNGYKPLCIITD--MFFGWCKEIAQEYGIFHAIFIGGGGFGFACYYSLWV 160 (473)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d--~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~ 160 (473)
. ...+......+.+++++. +||+|++- ..+.++..+|.++|||++.+...
T Consensus 75 ~--------~~~~~~~~~~l~~~l~~~-------kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eag------------- 126 (385)
T 4hwg_A 75 T--------AKSIGLVIEKVDEVLEKE-------KPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAG------------- 126 (385)
T ss_dssp S--------HHHHHHHHHHHHHHHHHH-------CCSEEEEESCSGGGGGHHHHHHTTCCEEEESCC-------------
T ss_pred H--------HHHHHHHHHHHHHHHHhc-------CCcEEEEECCchHHHHHHHHHHhCCCEEEEeCC-------------
Confidence 1 222234456678889999 99998873 33344578999999997765211
Q ss_pred cCCCCCCCCCcccCCCCCCCCcCCccccchhhhhcCCCChHHHHHHHHhccccCCcEEEEcCccccchhHHHHH-HhhcC
Q 047833 161 NLPHRNMDSDECVLPDFPEASTIHATQLADYLRVADGSDSFSAILQKVLPQWMNADGILVNTVEELDKIGLMYF-KRKFG 239 (473)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~ 239 (473)
+.. .. ..++ +...+.+. . ..++.++..+-. .-+.+ ....+
T Consensus 127 ----------------lrs---~~-~~~p---------ee~nR~~~---~--~~a~~~~~~te~-----~~~~l~~~G~~ 167 (385)
T 4hwg_A 127 ----------------NRC---FD-QRVP---------EEINRKII---D--HISDVNITLTEH-----ARRYLIAEGLP 167 (385)
T ss_dssp ----------------CCC---SC-TTST---------HHHHHHHH---H--HHCSEEEESSHH-----HHHHHHHTTCC
T ss_pred ----------------Ccc---cc-ccCc---------HHHHHHHH---H--hhhceeecCCHH-----HHHHHHHcCCC
Confidence 000 00 0000 01111111 0 112334444321 11111 12222
Q ss_pred -CCeEEecccCCCccCCCCCCCCCCCchhhHhhhhcCCCCCeEEEEeeCCcccCC-HHHHHHHHHHHHhC----CCceEE
Q 047833 240 -RSVWPIGPVLLSTENRGGAGKEYGISTELCKKWLDTKPYTSVLYVSFGSQNTIA-TSQMMQLAMALEAS----GKNFIW 313 (473)
Q Consensus 240 -~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~~~~-~~~~~~~~~al~~~----~~~~i~ 313 (473)
.++..+|-...+.-.. ........++.+.++-.+ ++.|+++.|...... .+.+..+++++... +..+|+
T Consensus 168 ~~~I~vtGnp~~D~~~~----~~~~~~~~~~~~~lgl~~-~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~ 242 (385)
T 4hwg_A 168 AELTFKSGSHMPEVLDR----FMPKILKSDILDKLSLTP-KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIF 242 (385)
T ss_dssp GGGEEECCCSHHHHHHH----HHHHHHHCCHHHHTTCCT-TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEE
T ss_pred cCcEEEECCchHHHHHH----hhhhcchhHHHHHcCCCc-CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 3678888433221000 000001122333343333 568889988765433 24455666666542 577777
Q ss_pred EECCCCCCCccc-cc----cccCCcEEEecccCh---HHhhccCCcceeEeccCcchHHHHHhhCCcEEeccccccchhh
Q 047833 314 VVRPPIGFDINS-EI----KCSGQGLVVHKWAPQ---VEILSHRSVSVFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYN 385 (473)
Q Consensus 314 ~~~~~~~~~~~~-~~----~~~~~nv~~~~~vp~---~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~n 385 (473)
..+... ... .. ....+++.+.+.+++ ..++++++ ++|+-.|. .+.||...|+|+|+++...+.++
T Consensus 243 p~~p~~---~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~ad--lvvt~SGg-v~~EA~alG~Pvv~~~~~ter~e- 315 (385)
T 4hwg_A 243 STHPRT---KKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAF--CILSDSGT-ITEEASILNLPALNIREAHERPE- 315 (385)
T ss_dssp EECHHH---HHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCS--EEEECCTT-HHHHHHHTTCCEEECSSSCSCTH-
T ss_pred ECChHH---HHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCc--EEEECCcc-HHHHHHHcCCCEEEcCCCccchh-
Confidence 664210 000 11 112358888777664 46788877 58888775 46899999999999987554333
Q ss_pred HHHHHHhhcceEEEecCCCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhcccccccCCcHHHHHHHHHHHH
Q 047833 386 SKLLEEEIGVCVEVARGKSSEVLKKDIAAKIELVMNETEKGIELRKNAYEVREIIKNAFKNEENFQGSSVKAMNQFLNAA 465 (473)
Q Consensus 386 A~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 465 (473)
. .+. |.++.+. .+.+.|.++|.++++|+...+.+++++.. +. .+|+++.+.++.+.+.+
T Consensus 316 --~-v~~-G~~~lv~------~d~~~i~~ai~~ll~d~~~~~~m~~~~~~----~~-------g~g~aa~rI~~~l~~~~ 374 (385)
T 4hwg_A 316 --G-MDA-GTLIMSG------FKAERVLQAVKTITEEHDNNKRTQGLVPD----YN-------EAGLVSKKILRIVLSYV 374 (385)
T ss_dssp --H-HHH-TCCEECC------SSHHHHHHHHHHHHTTCBTTBCCSCCCHH----HH-------TCCCHHHHHHHHHHHHH
T ss_pred --h-hhc-CceEEcC------CCHHHHHHHHHHHHhChHHHHHhhccCCC----CC-------CCChHHHHHHHHHHHHh
Confidence 2 347 8776553 37899999999999998221112222211 10 24666777777777665
Q ss_pred Hhh
Q 047833 466 SMV 468 (473)
Q Consensus 466 ~~~ 468 (473)
...
T Consensus 375 ~~~ 377 (385)
T 4hwg_A 375 DYI 377 (385)
T ss_dssp HHH
T ss_pred hhc
Confidence 543
No 36
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.02 E-value=1.4e-08 Score=98.27 Aligned_cols=159 Identities=11% Similarity=0.079 Sum_probs=92.1
Q ss_pred CCeEEEEeeCCcccCCHHHHHHHHHHHHh-----CCCceEEEECCCCCCCccc--ccc-ccCCcEEEecccCh---HHhh
Q 047833 278 YTSVLYVSFGSQNTIATSQMMQLAMALEA-----SGKNFIWVVRPPIGFDINS--EIK-CSGQGLVVHKWAPQ---VEIL 346 (473)
Q Consensus 278 ~~~~V~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~--~~~-~~~~nv~~~~~vp~---~~ll 346 (473)
+++.++++.|......+ .+..+++++.. .+.++++..+.. ..... ... ...++|.+.+++++ ..++
T Consensus 204 ~~~~vl~~~gr~~~~~K-~~~~li~a~~~l~~~~~~~~~i~~~g~~--~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 280 (375)
T 3beo_A 204 NNRLVLMTAHRRENLGE-PMRNMFRAIKRLVDKHEDVQVVYPVHMN--PVVRETANDILGDYGRIHLIEPLDVIDFHNVA 280 (375)
T ss_dssp TSEEEEEECCCGGGTTH-HHHHHHHHHHHHHHHCTTEEEEEECCSC--HHHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCCeEEEEecccccchh-HHHHHHHHHHHHHhhCCCeEEEEeCCCC--HHHHHHHHHHhhccCCEEEeCCCCHHHHHHHH
Confidence 35577778887654322 23445555543 245555432211 00011 111 12368999787775 4667
Q ss_pred ccCCcceeEeccCcchHHHHHhhCCcEEeccccccchhhHHHHHHhhcceEEEecCCCCccCHHHHHHHHHHHHcCChhh
Q 047833 347 SHRSVSVFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEIGVCVEVARGKSSEVLKKDIAAKIELVMNETEKG 426 (473)
Q Consensus 347 ~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~nA~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~ 426 (473)
+.+++ ||+..| +.+.||+++|+|+|+.+..+..++ +.+. |.|..++ . +.++|+++|.++++|+
T Consensus 281 ~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~e----~v~~-g~g~~v~-----~-d~~~la~~i~~ll~~~--- 343 (375)
T 3beo_A 281 ARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTERPE----GIEA-GTLKLAG-----T-DEETIFSLADELLSDK--- 343 (375)
T ss_dssp HTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSCHH----HHHT-TSEEECC-----S-CHHHHHHHHHHHHHCH---
T ss_pred HhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCCce----eecC-CceEEcC-----C-CHHHHHHHHHHHHhCh---
Confidence 77774 887763 458899999999999854333322 3447 8776653 2 7899999999999988
Q ss_pred HHHHHHHHHHHHHHHHhcccccccCCcHHHHHHHHHHHH
Q 047833 427 IELRKNAYEVREIIKNAFKNEENFQGSSVKAMNQFLNAA 465 (473)
Q Consensus 427 ~~~~~~a~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 465 (473)
+.+++ +++..++. .++.+..+.++.+.+.+
T Consensus 344 -~~~~~---~~~~~~~~-----~~~~~~~~i~~~~~~~~ 373 (375)
T 3beo_A 344 -EAHDK---MSKASNPY-----GDGRASERIVEAILKHF 373 (375)
T ss_dssp -HHHHH---HCCCCCTT-----CCSCHHHHHHHHHHHHT
T ss_pred -HhHhh---hhhcCCCC-----CCCcHHHHHHHHHHHHh
Confidence 33332 22222211 33555566666665544
No 37
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.02 E-value=1.2e-07 Score=91.47 Aligned_cols=148 Identities=12% Similarity=0.137 Sum_probs=95.0
Q ss_pred CeEEEEeeCCcccCCHHHHHHHHHHHHhC------CCceEEEECCCCCCCccc--cccccCCcEEEecccC-hHHhhccC
Q 047833 279 TSVLYVSFGSQNTIATSQMMQLAMALEAS------GKNFIWVVRPPIGFDINS--EIKCSGQGLVVHKWAP-QVEILSHR 349 (473)
Q Consensus 279 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~------~~~~i~~~~~~~~~~~~~--~~~~~~~nv~~~~~vp-~~~ll~~~ 349 (473)
+..+++..|+.... ..+..+++++... +.++ +.+|......... ......+++.+.++.. -..+++.+
T Consensus 195 ~~~~i~~~G~~~~~--K~~~~li~a~~~l~~~~~~~~~l-~i~G~g~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~a 271 (374)
T 2iw1_A 195 QQNLLLQVGSDFGR--KGVDRSIEALASLPESLRHNTLL-FVVGQDKPRKFEALAEKLGVRSNVHFFSGRNDVSELMAAA 271 (374)
T ss_dssp TCEEEEEECSCTTT--TTHHHHHHHHHTSCHHHHHTEEE-EEESSSCCHHHHHHHHHHTCGGGEEEESCCSCHHHHHHHC
T ss_pred CCeEEEEeccchhh--cCHHHHHHHHHHhHhccCCceEE-EEEcCCCHHHHHHHHHHcCCCCcEEECCCcccHHHHHHhc
Confidence 34566777877542 2233445566553 3344 4444321100001 1112357899888865 46678887
Q ss_pred CcceeEe----ccCcchHHHHHhhCCcEEeccccccchhhHHHHHHhhcceEEEecCCCCccCHHHHHHHHHHHHcCChh
Q 047833 350 SVSVFLS----HCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEIGVCVEVARGKSSEVLKKDIAAKIELVMNETEK 425 (473)
Q Consensus 350 ~v~~~I~----HGG~gt~~eal~~GvP~l~~P~~~DQ~~nA~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~~~~~ 425 (473)
++ +|. -|..+++.||+++|+|+|+.+. ..+...+++. +.|..++. .-+.+++.++|.++++|++.
T Consensus 272 d~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~~----~~~~~~l~~~i~~l~~~~~~ 340 (374)
T 2iw1_A 272 DL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIADA-NCGTVIAE----PFSQEQLNEVLRKALTQSPL 340 (374)
T ss_dssp SE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHHH-TCEEEECS----SCCHHHHHHHHHHHHHCHHH
T ss_pred CE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhccC-CceEEeCC----CCCHHHHHHHHHHHHcChHH
Confidence 75 664 4566789999999999999765 3456677766 88888862 35789999999999999855
Q ss_pred hHHHHHHHHHHHHHH
Q 047833 426 GIELRKNAYEVREII 440 (473)
Q Consensus 426 ~~~~~~~a~~l~~~~ 440 (473)
.+.+.+++++..++.
T Consensus 341 ~~~~~~~~~~~~~~~ 355 (374)
T 2iw1_A 341 RMAWAENARHYADTQ 355 (374)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHh
Confidence 556667776666543
No 38
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.92 E-value=6.3e-07 Score=87.93 Aligned_cols=161 Identities=13% Similarity=0.050 Sum_probs=95.3
Q ss_pred EEEEeeCCcccC-CHHHHHHHHHHHHh--CCCceEEEECCCCCCCcc------c--cccccCCcEEEecccC---h---H
Q 047833 281 VLYVSFGSQNTI-ATSQMMQLAMALEA--SGKNFIWVVRPPIGFDIN------S--EIKCSGQGLVVHKWAP---Q---V 343 (473)
Q Consensus 281 ~V~vs~GS~~~~-~~~~~~~~~~al~~--~~~~~i~~~~~~~~~~~~------~--~~~~~~~nv~~~~~vp---~---~ 343 (473)
.+++..|..... ..+.+...+..+.+ .+.+++++-... ..++. . ......++|.+.+|++ + .
T Consensus 232 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~-~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~ 310 (416)
T 2x6q_A 232 PIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMA-HDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVN 310 (416)
T ss_dssp CEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCEEEEEECCC-TTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHH
T ss_pred cEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEEecCc-ccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHH
Confidence 456667877653 34444444444433 356776665432 11110 1 1112357899988775 3 4
Q ss_pred HhhccCCcceeEecc----CcchHHHHHhhCCcEEeccccccchhhHHHHHHhhcceEEEecCCCCccCHHHHHHHHHHH
Q 047833 344 EILSHRSVSVFLSHC----GWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEIGVCVEVARGKSSEVLKKDIAAKIELV 419 (473)
Q Consensus 344 ~ll~~~~v~~~I~HG----G~gt~~eal~~GvP~l~~P~~~DQ~~nA~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~l 419 (473)
.+++.+++ +|.-. ...++.||+++|+|+|+.+. ..+...+... +.|..+ . +.++++++|.++
T Consensus 311 ~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~-~~g~l~-----~--d~~~la~~i~~l 376 (416)
T 2x6q_A 311 AFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDG-ETGFLV-----R--DANEAVEVVLYL 376 (416)
T ss_dssp HHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBT-TTEEEE-----S--SHHHHHHHHHHH
T ss_pred HHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecC-CCeEEE-----C--CHHHHHHHHHHH
Confidence 56677775 66433 44688999999999999764 3455555534 566665 2 778999999999
Q ss_pred HcCChhhHHHHHHHHHHHHHHHHhcccccccCCcHHHHHHHHHHHHHh
Q 047833 420 MNETEKGIELRKNAYEVREIIKNAFKNEENFQGSSVKAMNQFLNAASM 467 (473)
Q Consensus 420 l~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 467 (473)
++|++..+.+.+++++..+. .-+....++.+++.+++
T Consensus 377 l~~~~~~~~~~~~a~~~~~~-----------~fs~~~~~~~~~~~~~~ 413 (416)
T 2x6q_A 377 LKHPEVSKEMGAKAKERVRK-----------NFIITKHMERYLDILNS 413 (416)
T ss_dssp HHCHHHHHHHHHHHHHHHHH-----------HTBHHHHHHHHHHHHHT
T ss_pred HhCHHHHHHHHHHHHHHHHH-----------HcCHHHHHHHHHHHHHH
Confidence 99984444555555554321 11245556666665543
No 39
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=98.91 E-value=2.5e-08 Score=95.33 Aligned_cols=122 Identities=12% Similarity=0.062 Sum_probs=77.7
Q ss_pred EEEeeCCcccCCHHHHHHHHHHHHhCCCceEEEECCCCCCCccc---cccccCCcEEEecccChH---HhhccCCcceeE
Q 047833 282 LYVSFGSQNTIATSQMMQLAMALEASGKNFIWVVRPPIGFDINS---EIKCSGQGLVVHKWAPQV---EILSHRSVSVFL 355 (473)
Q Consensus 282 V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~---~~~~~~~nv~~~~~vp~~---~ll~~~~v~~~I 355 (473)
+++..|+... ..-...+++++...+.+++++-... .... ......++|.+.+++++. .++..+++ +|
T Consensus 164 ~i~~vG~~~~--~Kg~~~li~a~~~~~~~l~i~G~g~---~~~~l~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv--~v 236 (342)
T 2iuy_A 164 FLLFMGRVSP--HKGALEAAAFAHACGRRLVLAGPAW---EPEYFDEITRRYGSTVEPIGEVGGERRLDLLASAHA--VL 236 (342)
T ss_dssp CEEEESCCCG--GGTHHHHHHHHHHHTCCEEEESCCC---CHHHHHHHHHHHTTTEEECCCCCHHHHHHHHHHCSE--EE
T ss_pred EEEEEecccc--ccCHHHHHHHHHhcCcEEEEEeCcc---cHHHHHHHHHHhCCCEEEeccCCHHHHHHHHHhCCE--EE
Confidence 4455677653 2234455666666677766654321 1111 111223899999999975 77888886 55
Q ss_pred e-------------ccCc-chHHHHHhhCCcEEeccccccchhhHHHHHH--hhcceEEEecCCCCccCHHHHHHHHHHH
Q 047833 356 S-------------HCGW-NSVLEALSHGVPIIGWPLAAEQFYNSKLLEE--EIGVCVEVARGKSSEVLKKDIAAKIELV 419 (473)
Q Consensus 356 ~-------------HGG~-gt~~eal~~GvP~l~~P~~~DQ~~nA~~v~~--~lG~g~~l~~~~~~~~~~~~l~~~i~~l 419 (473)
. +-|. .++.||+++|+|+|+... ......+++ . +.|..+ .. +.+++.++|.++
T Consensus 237 ~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~~~~~~-~~g~~~-----~~-d~~~l~~~i~~l 305 (342)
T 2iuy_A 237 AMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIVPSVGE-VVGYGT-----DF-APDEARRTLAGL 305 (342)
T ss_dssp ECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHGGGGEE-ECCSSS-----CC-CHHHHHHHHHTS
T ss_pred ECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHhcccCC-CceEEc-----CC-CHHHHHHHHHHH
Confidence 2 2344 579999999999999875 345555554 3 344433 34 889999999999
Q ss_pred Hc
Q 047833 420 MN 421 (473)
Q Consensus 420 l~ 421 (473)
++
T Consensus 306 ~~ 307 (342)
T 2iuy_A 306 PA 307 (342)
T ss_dssp CC
T ss_pred HH
Confidence 87
No 40
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.45 E-value=4.3e-05 Score=76.42 Aligned_cols=159 Identities=9% Similarity=-0.055 Sum_probs=91.2
Q ss_pred EEEEeeCCcccC-CHHHHHHHHHHHHhCCCceEEEECCCCCCCccc---cccccCCcEE-EecccChH---HhhccCCcc
Q 047833 281 VLYVSFGSQNTI-ATSQMMQLAMALEASGKNFIWVVRPPIGFDINS---EIKCSGQGLV-VHKWAPQV---EILSHRSVS 352 (473)
Q Consensus 281 ~V~vs~GS~~~~-~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~---~~~~~~~nv~-~~~~vp~~---~ll~~~~v~ 352 (473)
.+++..|++... ..+.+...+..+.+.+.+++++-... ...... .....++++. +.++ +++ .+++.+++
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~-~~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~~~~~adv- 368 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGD-VALEGALLAAASRHHGRVGVAIGY-NEPLSHLMQAGCDA- 368 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBC-HHHHHHHHHHHHHTTTTEEEEESC-CHHHHHHHHHHCSE-
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCc-hHHHHHHHHHHHhCCCcEEEecCC-CHHHHHHHHhcCCE-
Confidence 477788888653 34444444444444567776665321 000011 1112346787 6777 543 56888775
Q ss_pred eeEe----ccCcchHHHHHhhCCcEEeccccccchhhHHHHHHhh---------cceEEEecCCCCccCHHHHHHHHHHH
Q 047833 353 VFLS----HCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEI---------GVCVEVARGKSSEVLKKDIAAKIELV 419 (473)
Q Consensus 353 ~~I~----HGG~gt~~eal~~GvP~l~~P~~~DQ~~nA~~v~~~l---------G~g~~l~~~~~~~~~~~~l~~~i~~l 419 (473)
+|. -|--.++.||+++|+|+|+... ......+. .- +.|..++. -+.++|+++|.++
T Consensus 369 -~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~-~~~~~~~~~~~~~G~l~~~-----~d~~~la~~i~~l 437 (485)
T 1rzu_A 369 -IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVI-DANHAALASKAATGVQFSP-----VTLDGLKQAIRRT 437 (485)
T ss_dssp -EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCC-BCCHHHHHTTCCCBEEESS-----CSHHHHHHHHHHH
T ss_pred -EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheec-ccccccccccCCcceEeCC-----CCHHHHHHHHHHH
Confidence 653 2334689999999999999764 23333333 30 25666654 4789999999999
Q ss_pred H---cCChhhHHHHHHHHHHHHHHHHhcccccccCCcHHHHHHHHHHHHHh
Q 047833 420 M---NETEKGIELRKNAYEVREIIKNAFKNEENFQGSSVKAMNQFLNAASM 467 (473)
Q Consensus 420 l---~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 467 (473)
+ +|++..+++.+++ + .+.-+-....+.+++.+++
T Consensus 438 l~~~~~~~~~~~~~~~~-------~-------~~~fs~~~~~~~~~~~y~~ 474 (485)
T 1rzu_A 438 VRYYHDPKLWTQMQKLG-------M-------KSDVSWEKSAGLYAALYSQ 474 (485)
T ss_dssp HHHHTCHHHHHHHHHHH-------H-------TCCCBHHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHH-------H-------HHhCChHHHHHHHHHHHHH
Confidence 9 6762222333333 2 2244455556666665543
No 41
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.44 E-value=1.7e-06 Score=73.99 Aligned_cols=128 Identities=12% Similarity=0.088 Sum_probs=84.6
Q ss_pred EEEEeeCCcccCCHHHHHHHHHHHHhC-CCceEEEECCCCCCCccc--c--ccccCCcEEEecccCh---HHhhccCCcc
Q 047833 281 VLYVSFGSQNTIATSQMMQLAMALEAS-GKNFIWVVRPPIGFDINS--E--IKCSGQGLVVHKWAPQ---VEILSHRSVS 352 (473)
Q Consensus 281 ~V~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~--~--~~~~~~nv~~~~~vp~---~~ll~~~~v~ 352 (473)
.+++..|+... ...+..+++++... +.+++++-.......... . ....++||.+.+|+++ ..++..+++
T Consensus 24 ~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adi- 100 (177)
T 2f9f_A 24 DFWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKG- 100 (177)
T ss_dssp SCEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCSE-
T ss_pred CEEEEEecccc--ccCHHHHHHHHHhCCCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhCCE-
Confidence 34556777753 22344566666665 567666554321111111 1 2234679999999997 677878885
Q ss_pred eeEe---ccCcc-hHHHHHhhCCcEEeccccccchhhHHHHHHhhcceEEEecCCCCccCHHHHHHHHHHHHcCC
Q 047833 353 VFLS---HCGWN-SVLEALSHGVPIIGWPLAAEQFYNSKLLEEEIGVCVEVARGKSSEVLKKDIAAKIELVMNET 423 (473)
Q Consensus 353 ~~I~---HGG~g-t~~eal~~GvP~l~~P~~~DQ~~nA~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~~~ 423 (473)
+|. +.|+| ++.||+++|+|+|+... ..+...+++. +.|..+ . -+.+++.++|.++++|+
T Consensus 101 -~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~-~~g~~~-~-----~d~~~l~~~i~~l~~~~ 163 (177)
T 2f9f_A 101 -LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVINE-KTGYLV-N-----ADVNEIIDAMKKVSKNP 163 (177)
T ss_dssp -EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCBT-TTEEEE-C-----SCHHHHHHHHHHHHHCT
T ss_pred -EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcCC-CccEEe-C-----CCHHHHHHHHHHHHhCH
Confidence 555 34554 89999999999999753 4555555544 577776 4 36789999999999988
No 42
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.44 E-value=1.4e-05 Score=84.15 Aligned_cols=96 Identities=10% Similarity=0.054 Sum_probs=62.9
Q ss_pred cCCcEEEeccc----ChHHhhc----cCCcceeEec----cCcchHHHHHhhCCcEEeccccccchhhHHHHHHhhcceE
Q 047833 330 SGQGLVVHKWA----PQVEILS----HRSVSVFLSH----CGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEIGVCV 397 (473)
Q Consensus 330 ~~~nv~~~~~v----p~~~ll~----~~~v~~~I~H----GG~gt~~eal~~GvP~l~~P~~~DQ~~nA~~v~~~lG~g~ 397 (473)
..++|.+.++. ++.++.. .++ +||.- |--.++.||+++|+|+|+. |.......+... ..|+
T Consensus 638 L~~~V~flG~~~~~v~~~eL~~~~~~aaD--vfV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~dg-~~Gl 710 (816)
T 3s28_A 638 LNGQFRWISSQMDRVRNGELYRYICDTKG--AFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVHG-KSGF 710 (816)
T ss_dssp CBBBEEEECCCCCHHHHHHHHHHHHHTTC--EEEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCBT-TTBE
T ss_pred CCCcEEEccCccccCCHHHHHHHHHhcCe--EEEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHccC-CcEE
Confidence 34788888744 4455544 344 36632 3345899999999999996 444455555544 5788
Q ss_pred EEecCCCCccCHHHHHHHHHHHH----cCChhhHHHHHHHHHHH
Q 047833 398 EVARGKSSEVLKKDIAAKIELVM----NETEKGIELRKNAYEVR 437 (473)
Q Consensus 398 ~l~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~a~~l~ 437 (473)
.++. -+.++++++|.+++ +|++..+.+.++|++..
T Consensus 711 lv~p-----~D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a 749 (816)
T 3s28_A 711 HIDP-----YHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRI 749 (816)
T ss_dssp EECT-----TSHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHH
T ss_pred EeCC-----CCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 7765 47788999997766 88844445555555543
No 43
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.43 E-value=0.0003 Score=71.75 Aligned_cols=118 Identities=16% Similarity=0.069 Sum_probs=73.4
Q ss_pred CcEEEecccChH---HhhccCCcceeEe---ccCcchHHHHHhhCCcEEecccccc-chhhHHHHHHhhcceEEEecCCC
Q 047833 332 QGLVVHKWAPQV---EILSHRSVSVFLS---HCGWNSVLEALSHGVPIIGWPLAAE-QFYNSKLLEEEIGVCVEVARGKS 404 (473)
Q Consensus 332 ~nv~~~~~vp~~---~ll~~~~v~~~I~---HGG~gt~~eal~~GvP~l~~P~~~D-Q~~nA~~v~~~lG~g~~l~~~~~ 404 (473)
++|++.+++|+. .++..+++ ||. .|+..++.||+++|+|+|++|-..= -..-+..+... |+.-.+.
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~-g~~e~v~---- 506 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHL-GLDEMNV---- 506 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHH-TCGGGBC----
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHC-CChhhhc----
Confidence 789999999854 55777775 651 2566789999999999999764311 11113344433 6654332
Q ss_pred CccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhcccccccCCcHHHHHHHHHHHHHh
Q 047833 405 SEVLKKDIAAKIELVMNETEKGIELRKNAYEVREIIKNAFKNEENFQGSSVKAMNQFLNAASM 467 (473)
Q Consensus 405 ~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 467 (473)
-+.+++.++|.++++|++..+.+++++++..+. .+..+.....+.+++.+++
T Consensus 507 --~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~---------~~~f~~~~~~~~~~~~y~~ 558 (568)
T 2vsy_A 507 --ADDAAFVAKAVALASDPAALTALHARVDVLRRA---------SGVFHMDGFADDFGALLQA 558 (568)
T ss_dssp --SSHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH---------SSTTCHHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhc---------CCCCCHHHHHHHHHHHHHH
Confidence 178999999999999984444455555443311 1233345555555554443
No 44
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.42 E-value=2.9e-05 Score=77.63 Aligned_cols=162 Identities=9% Similarity=-0.061 Sum_probs=91.4
Q ss_pred EEEEeeCCccc-CCHHHHHHHHHHHHhCCCceEEEECCCCCCCcc---ccccccCCcEE-EecccCh--HHhhccCCcce
Q 047833 281 VLYVSFGSQNT-IATSQMMQLAMALEASGKNFIWVVRPPIGFDIN---SEIKCSGQGLV-VHKWAPQ--VEILSHRSVSV 353 (473)
Q Consensus 281 ~V~vs~GS~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~---~~~~~~~~nv~-~~~~vp~--~~ll~~~~v~~ 353 (473)
.+++..|++.. ...+.+...+..+.+.+.+++++-... ..... ......++++. +.++... ..+++.+++
T Consensus 293 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~-~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv-- 369 (485)
T 2qzs_A 293 PLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGD-PVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADV-- 369 (485)
T ss_dssp CEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEEC-HHHHHHHHHHHHHSTTTEEEEESCCHHHHHHHHHHCSE--
T ss_pred eEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCc-hHHHHHHHHHHHhCCCcEEEeCCCCHHHHHHHHHhCCE--
Confidence 55666777754 334444444444444467776665321 00000 01112246785 6777332 356888775
Q ss_pred eEe----ccCcchHHHHHhhCCcEEeccccccchhhHHHHHHhh---------cceEEEecCCCCccCHHHHHHHHHHHH
Q 047833 354 FLS----HCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEI---------GVCVEVARGKSSEVLKKDIAAKIELVM 420 (473)
Q Consensus 354 ~I~----HGG~gt~~eal~~GvP~l~~P~~~DQ~~nA~~v~~~l---------G~g~~l~~~~~~~~~~~~l~~~i~~ll 420 (473)
+|. -|.-.++.||+++|+|+|+... ......+. .- +.|..++. -+.++|+++|.+++
T Consensus 370 ~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~-~~~~~~~~~~~~~G~l~~~-----~d~~~la~~i~~ll 439 (485)
T 2qzs_A 370 ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVS-DCSLENLADGVASGFVFED-----SNAWSLLRAIRRAF 439 (485)
T ss_dssp EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCC-BCCHHHHHTTCCCBEEECS-----SSHHHHHHHHHHHH
T ss_pred EEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceec-cCccccccccccceEEECC-----CCHHHHHHHHHHHH
Confidence 553 2334688899999999999854 23333333 30 36776654 47899999999999
Q ss_pred ---cCChhhHHHHHHHHHHHHHHHHhcccccccCCcHHHHHHHHHHHHHhhh
Q 047833 421 ---NETEKGIELRKNAYEVREIIKNAFKNEENFQGSSVKAMNQFLNAASMVK 469 (473)
Q Consensus 421 ---~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 469 (473)
+|++..+.+.+++ + .+.-+-...++.+++.+++..
T Consensus 440 ~~~~~~~~~~~~~~~~-------~-------~~~fs~~~~~~~~~~ly~~~~ 477 (485)
T 2qzs_A 440 VLWSRPSLWRFVQRQA-------M-------AMDFSWQVAAKSYRELYYRLK 477 (485)
T ss_dssp HHHTSHHHHHHHHHHH-------H-------HCCCCHHHHHHHHHHHHHHHC
T ss_pred HHcCCHHHHHHHHHHH-------H-------hhcCCHHHHHHHHHHHHHHhh
Confidence 6762222333333 2 123445666677766665543
No 45
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.37 E-value=0.00012 Score=70.55 Aligned_cols=101 Identities=18% Similarity=0.289 Sum_probs=73.4
Q ss_pred cEEEecccC-hHHhhccCCcceeEe--c--cCcchHHHHHhhCCcEEeccccccchhhHHHHHHhhcceEEEecCCCCcc
Q 047833 333 GLVVHKWAP-QVEILSHRSVSVFLS--H--CGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEIGVCVEVARGKSSEV 407 (473)
Q Consensus 333 nv~~~~~vp-~~~ll~~~~v~~~I~--H--GG~gt~~eal~~GvP~l~~P~~~DQ~~nA~~v~~~lG~g~~l~~~~~~~~ 407 (473)
++.+.++.. -..+++.+++ .|+. . +|..++.||+++|+|+|+-|...+.++....+.+. |.++.. -
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv-~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~-------~ 331 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI-AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEV-------K 331 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE-EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEEC-------C
T ss_pred cEEEECCHHHHHHHHHhCCE-EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEe-------C
Confidence 566666544 4566777664 2331 1 23478999999999999888777777777666546 776554 2
Q ss_pred CHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHh
Q 047833 408 LKKDIAAKIELVMNETEKGIELRKNAYEVREIIKNA 443 (473)
Q Consensus 408 ~~~~l~~~i~~ll~~~~~~~~~~~~a~~l~~~~~~~ 443 (473)
+.++|+++|.++++| +..+.+.+++++..+.-..+
T Consensus 332 d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~~~ga 366 (374)
T 2xci_A 332 NETELVTKLTELLSV-KKEIKVEEKSREIKGCYLEK 366 (374)
T ss_dssp SHHHHHHHHHHHHHS-CCCCCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHhcccH
Confidence 568999999999998 66668999999888776544
No 46
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.30 E-value=0.00043 Score=67.42 Aligned_cols=163 Identities=7% Similarity=0.006 Sum_probs=90.6
Q ss_pred eEEEEeeCCccc-CCHHHHHHHHHHHH-h-CCCceEEEECCCCCCCc---cc-c----ccccCCc-------EEEecccC
Q 047833 280 SVLYVSFGSQNT-IATSQMMQLAMALE-A-SGKNFIWVVRPPIGFDI---NS-E----IKCSGQG-------LVVHKWAP 341 (473)
Q Consensus 280 ~~V~vs~GS~~~-~~~~~~~~~~~al~-~-~~~~~i~~~~~~~~~~~---~~-~----~~~~~~n-------v~~~~~vp 341 (473)
..+++..|+... ...+.+...+..+. + .+.+++++-........ .. . .....++ +.+.+|++
T Consensus 184 ~~~il~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~ 263 (413)
T 3oy2_A 184 DVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLT 263 (413)
T ss_dssp SEEEECCSCSSGGGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCC
T ss_pred ceEEEEcCCCchhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccCcCC
Confidence 467778888754 23344333333332 2 35777766543311000 11 1 1123343 77889999
Q ss_pred hH---HhhccCCcceeEe----ccCcchHHHHHhhCCcEEeccccccchhhHHHHHHhhcc----------------eE-
Q 047833 342 QV---EILSHRSVSVFLS----HCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEIGV----------------CV- 397 (473)
Q Consensus 342 ~~---~ll~~~~v~~~I~----HGG~gt~~eal~~GvP~l~~P~~~DQ~~nA~~v~~~lG~----------------g~- 397 (473)
+. .++..+++ +|. -|...++.||+++|+|+|+... ......+. . |. |.
T Consensus 264 ~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----~g~~e~v~-~-~~~~~i~~~~~~~~~~~~G~~ 335 (413)
T 3oy2_A 264 DERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAV----GGADDYFS-G-DCVYKIKPSAWISVDDRDGIG 335 (413)
T ss_dssp HHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECC----HHHHHHSC-T-TTSEEECCCEEEECTTTCSSC
T ss_pred HHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCC----CChHHHHc-c-CcccccccccccccccccCcc
Confidence 54 45667775 553 2333589999999999999654 23333343 2 33 44
Q ss_pred -EEecCCCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhcccccccCCcHHHHHHHHHHHHHh
Q 047833 398 -EVARGKSSEVLKKDIAAKIELVMNETEKGIELRKNAYEVREIIKNAFKNEENFQGSSVKAMNQFLNAASM 467 (473)
Q Consensus 398 -~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 467 (473)
.+.. -+.++++++| ++++|++..+.+.+++++.. .+.-+..+..+.+++.+++
T Consensus 336 gl~~~-----~d~~~la~~i-~l~~~~~~~~~~~~~a~~~~-----------~~~fs~~~~~~~~~~~~~~ 389 (413)
T 3oy2_A 336 GIEGI-----IDVDDLVEAF-TFFKDEKNRKEYGKRVQDFV-----------KTKPTWDDISSDIIDFFNS 389 (413)
T ss_dssp CEEEE-----CCHHHHHHHH-HHTTSHHHHHHHHHHHHHHH-----------TTSCCHHHHHHHHHHHHHH
T ss_pred eeeCC-----CCHHHHHHHH-HHhcCHHHHHHHHHHHHHHH-----------HHhCCHHHHHHHHHHHHHH
Confidence 5543 3889999999 99999833233333333332 2233455555666655544
No 47
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.10 E-value=0.0013 Score=63.91 Aligned_cols=114 Identities=10% Similarity=-0.009 Sum_probs=74.8
Q ss_pred EEEEeeCCcccCCHHHHHHHHHHHHh--CCCceEEEECCCCCCCccccccccCCcEEEecccChH---HhhccCCcceeE
Q 047833 281 VLYVSFGSQNTIATSQMMQLAMALEA--SGKNFIWVVRPPIGFDINSEIKCSGQGLVVHKWAPQV---EILSHRSVSVFL 355 (473)
Q Consensus 281 ~V~vs~GS~~~~~~~~~~~~~~al~~--~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~---~ll~~~~v~~~I 355 (473)
.+++..|++.. .+.. +..+.+ .+.+++++ |.+ . . ......++|.+.+++|+. .+++.+++ +|
T Consensus 223 ~~i~~vGrl~~-~Kg~----~~~l~~~~~~~~l~iv-G~g--~-~--~~~~l~~~V~f~G~~~~~~l~~~~~~adv--~v 289 (406)
T 2hy7_A 223 IHAVAVGSMLF-DPEF----FVVASKAFPQVTFHVI-GSG--M-G--RHPGYGDNVIVYGEMKHAQTIGYIKHARF--GI 289 (406)
T ss_dssp EEEEEECCTTB-CHHH----HHHHHHHCTTEEEEEE-SCS--S-C--CCTTCCTTEEEECCCCHHHHHHHHHTCSE--EE
T ss_pred cEEEEEecccc-ccCH----HHHHHHhCCCeEEEEE-eCc--h-H--HhcCCCCCEEEcCCCCHHHHHHHHHhcCE--EE
Confidence 56677788865 3333 333333 34555544 432 1 1 122346789999999965 45777775 54
Q ss_pred e---ccCc-chHHHHH-------hhCCcEEeccccccchhhHHHHHHhhcceEE-EecCCCCccCHHHHHHHHHHHHcCC
Q 047833 356 S---HCGW-NSVLEAL-------SHGVPIIGWPLAAEQFYNSKLLEEEIGVCVE-VARGKSSEVLKKDIAAKIELVMNET 423 (473)
Q Consensus 356 ~---HGG~-gt~~eal-------~~GvP~l~~P~~~DQ~~nA~~v~~~lG~g~~-l~~~~~~~~~~~~l~~~i~~ll~~~ 423 (473)
. +-|+ +++.||+ ++|+|+|+... +... ..|.. ++. -+.++|+++|.++++++
T Consensus 290 ~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G~l~v~~-----~d~~~la~ai~~ll~~~ 353 (406)
T 2hy7_A 290 APYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKSRFGYTP-----GNADSVIAAITQALEAP 353 (406)
T ss_dssp CCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSSEEEECT-----TCHHHHHHHHHHHHHCC
T ss_pred ECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cceEEEeCC-----CCHHHHHHHHHHHHhCc
Confidence 3 3444 5788999 99999999865 4433 45766 654 47899999999999998
No 48
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.66 E-value=0.00022 Score=59.67 Aligned_cols=142 Identities=15% Similarity=0.099 Sum_probs=83.2
Q ss_pred eEEEEeeCCcccCCHHHHHHHHHHHHhC----CCceEEEECCCCCCCccc---cccccCCcEEEecccChH---HhhccC
Q 047833 280 SVLYVSFGSQNTIATSQMMQLAMALEAS----GKNFIWVVRPPIGFDINS---EIKCSGQGLVVHKWAPQV---EILSHR 349 (473)
Q Consensus 280 ~~V~vs~GS~~~~~~~~~~~~~~al~~~----~~~~i~~~~~~~~~~~~~---~~~~~~~nv~~~~~vp~~---~ll~~~ 349 (473)
+++++..|++.... ....+++++... +.++++ .|.. ..... .....+.++.+ +|+|+. .++..+
T Consensus 2 ~~~i~~~G~~~~~K--g~~~li~a~~~l~~~~~~~l~i-~G~g--~~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~~~~a 75 (166)
T 3qhp_A 2 PFKIAMVGRYSNEK--NQSVLIKAVALSKYKQDIVLLL-KGKG--PDEKKIKLLAQKLGVKAEF-GFVNSNELLEILKTC 75 (166)
T ss_dssp CEEEEEESCCSTTT--THHHHHHHHHTCTTGGGEEEEE-ECCS--TTHHHHHHHHHHHTCEEEC-CCCCHHHHHHHHTTC
T ss_pred ceEEEEEeccchhc--CHHHHHHHHHHhccCCCeEEEE-EeCC--ccHHHHHHHHHHcCCeEEE-eecCHHHHHHHHHhC
Confidence 46777888876422 233455555543 334444 3322 11111 11122347888 999864 567777
Q ss_pred CcceeEe----ccCcchHHHHHhhCC-cEEeccccccchhhHHHHHHhhcceEEEecCCCCccCHHHHHHHHHHHHcCCh
Q 047833 350 SVSVFLS----HCGWNSVLEALSHGV-PIIGWPLAAEQFYNSKLLEEEIGVCVEVARGKSSEVLKKDIAAKIELVMNETE 424 (473)
Q Consensus 350 ~v~~~I~----HGG~gt~~eal~~Gv-P~l~~P~~~DQ~~nA~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~~~~ 424 (473)
++ +|. -|...++.||+++|+ |+|+....+ .....+. . |.. .+. .-+.+++.++|.++++|++
T Consensus 76 dv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~---~~~~~~~-~-~~~-~~~-----~~~~~~l~~~i~~l~~~~~ 142 (166)
T 3qhp_A 76 TL--YVHAANVESEAIACLEAISVGIVPVIANSPLS---ATRQFAL-D-ERS-LFE-----PNNAKDLSAKIDWWLENKL 142 (166)
T ss_dssp SE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTC---GGGGGCS-S-GGG-EEC-----TTCHHHHHHHHHHHHHCHH
T ss_pred CE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCC---chhhhcc-C-Cce-EEc-----CCCHHHHHHHHHHHHhCHH
Confidence 75 654 233458999999996 999943221 1112222 2 222 332 3578999999999999986
Q ss_pred hhHHHHHHHHHHHHHH
Q 047833 425 KGIELRKNAYEVREII 440 (473)
Q Consensus 425 ~~~~~~~~a~~l~~~~ 440 (473)
..+.+.+++++..+.+
T Consensus 143 ~~~~~~~~~~~~~~~~ 158 (166)
T 3qhp_A 143 ERERMQNEYAKSALNY 158 (166)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHC
Confidence 5666777777766554
No 49
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.60 E-value=0.00081 Score=58.09 Aligned_cols=142 Identities=12% Similarity=0.025 Sum_probs=86.6
Q ss_pred EEEeeCCcc-c-CCHHHHHHHHHHHH--h--CCCceEEEECCCCCCCccc---cccccCCcEEE-ecccCh---HHhhcc
Q 047833 282 LYVSFGSQN-T-IATSQMMQLAMALE--A--SGKNFIWVVRPPIGFDINS---EIKCSGQGLVV-HKWAPQ---VEILSH 348 (473)
Q Consensus 282 V~vs~GS~~-~-~~~~~~~~~~~al~--~--~~~~~i~~~~~~~~~~~~~---~~~~~~~nv~~-~~~vp~---~~ll~~ 348 (473)
+++..|+.. . ...+.+...+..+. + .+.+++++- ......... .....+ +|.+ .+++++ ..++..
T Consensus 38 ~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~l~i~G-~~~~~~~~~l~~~~~~~~-~v~~~~g~~~~~~~~~~~~~ 115 (200)
T 2bfw_A 38 TFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIG-KGDPELEGWARSLEEKHG-NVKVITEMLSREFVRELYGS 115 (200)
T ss_dssp EEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEEC-CBCHHHHHHHHHHHHHCT-TEEEECSCCCHHHHHHHHTT
T ss_pred EEEEeeccccccCCHHHHHHHHHHHHhhccCCCeEEEEEC-CCChHHHHHHHHHHHhcC-CEEEEeccCCHHHHHHHHHH
Confidence 666778877 4 33455444444443 2 234555443 220000011 111222 8999 999985 466777
Q ss_pred CCcceeEecc---C-cchHHHHHhhCCcEEeccccccchhhHHHHHHhhcceEEEecCCCCccCHHHHHHHHHHHHc-CC
Q 047833 349 RSVSVFLSHC---G-WNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEIGVCVEVARGKSSEVLKKDIAAKIELVMN-ET 423 (473)
Q Consensus 349 ~~v~~~I~HG---G-~gt~~eal~~GvP~l~~P~~~DQ~~nA~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~-~~ 423 (473)
+++ +|.-. | ..++.||+++|+|+|+... ......+ .. +.|..++. -+.+++.++|.++++ |+
T Consensus 116 ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~~-~~g~~~~~-----~~~~~l~~~i~~l~~~~~ 182 (200)
T 2bfw_A 116 VDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILVKA-----GDPGELANAILKALELSR 182 (200)
T ss_dssp CSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-CT-TTCEEECT-----TCHHHHHHHHHHHHHCCH
T ss_pred CCE--EEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-CC-CceEEecC-----CCHHHHHHHHHHHHhcCH
Confidence 775 55322 3 4578999999999988754 3444444 34 67777754 478999999999999 98
Q ss_pred hhhHHHHHHHHHHHH
Q 047833 424 EKGIELRKNAYEVRE 438 (473)
Q Consensus 424 ~~~~~~~~~a~~l~~ 438 (473)
+..+.+.++|++..+
T Consensus 183 ~~~~~~~~~a~~~~~ 197 (200)
T 2bfw_A 183 SDLSKFRENCKKRAM 197 (200)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 555556666665544
No 50
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.27 E-value=0.013 Score=55.63 Aligned_cols=106 Identities=14% Similarity=0.038 Sum_probs=72.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhC-CCcEEEEEcCCcchhhhhccCCCCCCce-EEecCCCCCCCCCCCCCCCCC
Q 047833 4 RKETIVLFPFMAQGHIIPFLALALHLEKT-NKYTITFVNTPLNLRKLKSSVPQNSSIN-LLEIPFDSIDHNLPPCTENTD 81 (473)
Q Consensus 4 ~~~~il~~~~~~~GH~~p~l~La~~L~~~-rGh~Vt~~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~ 81 (473)
.+.||+++-..+.||+.-...+.++|++. .+.+|++++.+.+.+.++.. ..++ +..++..
T Consensus 7 ~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~----p~vd~vi~~~~~-------------- 68 (349)
T 3tov_A 7 DYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYN----PNIDELIVVDKK-------------- 68 (349)
T ss_dssp TTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSC----TTCSEEEEECCS--------------
T ss_pred CCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC----CCccEEEEeCcc--------------
Confidence 46799999999999999999999999994 49999999998887776552 2232 3333310
Q ss_pred CCChhhHHHHHHHHHhhhHHHHHHHHhHhhhcCCCCc-cEEEECCCcchHHHHHHHhCCceEE
Q 047833 82 SVPYHLVSKLIEATLSFKPHFKKLVNDLIDEQNGYKP-LCIITDMFFGWCKEIAQEYGIFHAI 143 (473)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p-D~Vv~d~~~~~~~~~A~~~giP~v~ 143 (473)
... ..+. . .-.+...++.. ++ |+||.-....-...++...|+|..+
T Consensus 69 -~~~---~~~~-~----~~~l~~~Lr~~-------~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 69 -GRH---NSIS-G----LNEVAREINAK-------GKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp -SHH---HHHH-H----HHHHHHHHHHH-------CCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred -ccc---ccHH-H----HHHHHHHHhhC-------CCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 000 1111 1 11223345555 89 9999876666566788899999765
No 51
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.22 E-value=0.015 Score=54.99 Aligned_cols=46 Identities=13% Similarity=0.041 Sum_probs=39.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC-CCcEEEEEcCCcchhhhhc
Q 047833 6 ETIVLFPFMAQGHIIPFLALALHLEKT-NKYTITFVNTPLNLRKLKS 51 (473)
Q Consensus 6 ~~il~~~~~~~GH~~p~l~La~~L~~~-rGh~Vt~~~~~~~~~~v~~ 51 (473)
+||+++.....||+.-...+.++|++. .+.+|++++.+.+.+.++.
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~ 47 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSR 47 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTT
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhc
Confidence 379999988889999999999999983 4999999999877766544
No 52
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.17 E-value=0.0044 Score=62.40 Aligned_cols=146 Identities=10% Similarity=0.078 Sum_probs=90.7
Q ss_pred eEEEEeeCCcccCCHHHHHHHHHHHHhCCCceEEE--ECCCCCCCcc---c-cccccCCcEEEecccChHHhh---ccCC
Q 047833 280 SVLYVSFGSQNTIATSQMMQLAMALEASGKNFIWV--VRPPIGFDIN---S-EIKCSGQGLVVHKWAPQVEIL---SHRS 350 (473)
Q Consensus 280 ~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~--~~~~~~~~~~---~-~~~~~~~nv~~~~~vp~~~ll---~~~~ 350 (473)
.++|.+|++.....++.+....+.+.+.+..++|. .+...+.... . ......+.+++.+.+|+.+.+ ..++
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~~aD 520 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGITHPYVERFIKSYLGDSATAHPHSPYHQYLRILHNCD 520 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGGHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHHTCS
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhhHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHhcCc
Confidence 58999999888888999999999998877666653 4422111000 0 011123567888999866544 5666
Q ss_pred cceeE---eccCcchHHHHHhhCCcEEeccccccchhh-HHHHHHhhcceEEEecCCCCccCHHHHHHHHHHHHcCChhh
Q 047833 351 VSVFL---SHCGWNSVLEALSHGVPIIGWPLAAEQFYN-SKLLEEEIGVCVEVARGKSSEVLKKDIAAKIELVMNETEKG 426 (473)
Q Consensus 351 v~~~I---~HGG~gt~~eal~~GvP~l~~P~~~DQ~~n-A~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~ 426 (473)
+ |+ ..+|..|++||+++|||+|..+-..=.-.. +..+. .+|+.-.+- .-+.++..+...++.+|++..
T Consensus 521 I--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~-~~GLpE~LI-----A~d~eeYv~~Av~La~D~~~l 592 (631)
T 3q3e_A 521 M--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFK-RLGLPEWLI-----ANTVDEYVERAVRLAENHQER 592 (631)
T ss_dssp E--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHH-HTTCCGGGE-----ESSHHHHHHHHHHHHHCHHHH
T ss_pred E--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHH-hcCCCccee-----cCCHHHHHHHHHHHhCCHHHH
Confidence 5 43 347889999999999999998742111111 12222 225432111 236788889999999998433
Q ss_pred HHHHHHH
Q 047833 427 IELRKNA 433 (473)
Q Consensus 427 ~~~~~~a 433 (473)
..+++++
T Consensus 593 ~~LR~~L 599 (631)
T 3q3e_A 593 LELRRYI 599 (631)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3444443
No 53
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.17 E-value=0.0063 Score=63.64 Aligned_cols=147 Identities=16% Similarity=0.223 Sum_probs=94.4
Q ss_pred CCeEEEEeeCCcccCCHHHHHHHHHHHHhCCCceEEEECCCCCCCccc------cccccCCcEEEecccChHHhhc-cCC
Q 047833 278 YTSVLYVSFGSQNTIATSQMMQLAMALEASGKNFIWVVRPPIGFDINS------EIKCSGQGLVVHKWAPQVEILS-HRS 350 (473)
Q Consensus 278 ~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~------~~~~~~~nv~~~~~vp~~~ll~-~~~ 350 (473)
+..+||+||-+....+++.+..-.+.|++.+--++|....+. ..... .....++.+++.+.+|..+.|. +..
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~-~~~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~~~ 599 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPA-VGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQL 599 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTG-GGHHHHHHHHHHTTCCGGGEEEEECCCHHHHHHHGGG
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCcCeEEECCCCCHHHHHHHhCC
Confidence 456999999988889999999999999998877777775431 11000 0112246688888888655543 222
Q ss_pred cceeE---eccCcchHHHHHhhCCcEEeccccc-cchhhHHHHHHhhcceEEEecCCCCccCHHHHHHHHHHHHcCChhh
Q 047833 351 VSVFL---SHCGWNSVLEALSHGVPIIGWPLAA-EQFYNSKLLEEEIGVCVEVARGKSSEVLKKDIAAKIELVMNETEKG 426 (473)
Q Consensus 351 v~~~I---~HGG~gt~~eal~~GvP~l~~P~~~-DQ~~nA~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~ 426 (473)
++.++ ..+|.+|++|||+.|||+|.+|-.. =...-+..+. .+|+.-.+ .-+.++-.+...++-+|++..
T Consensus 600 ~Di~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~-~~gl~e~i------a~~~~~Y~~~a~~la~d~~~l 672 (723)
T 4gyw_A 600 ADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLT-CLGCLELI------AKNRQEYEDIAVKLGTDLEYL 672 (723)
T ss_dssp CSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHH-HHTCGGGB------CSSHHHHHHHHHHHHHCHHHH
T ss_pred CeEEeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHH-HcCCcccc------cCCHHHHHHHHHHHhcCHHHH
Confidence 33464 4889999999999999999999321 1222233333 33655433 346677666666777777343
Q ss_pred HHHHHH
Q 047833 427 IELRKN 432 (473)
Q Consensus 427 ~~~~~~ 432 (473)
..+|++
T Consensus 673 ~~lr~~ 678 (723)
T 4gyw_A 673 KKVRGK 678 (723)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 344444
No 54
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.12 E-value=0.0016 Score=61.45 Aligned_cols=146 Identities=14% Similarity=0.101 Sum_probs=95.0
Q ss_pred EEEEeeCCcccCCHHHHHHHHHHHHhCCCceEEEECCCCCCCccccccccCCcEEEecccChHHhhc---cCCcceeEec
Q 047833 281 VLYVSFGSQNTIATSQMMQLAMALEASGKNFIWVVRPPIGFDINSEIKCSGQGLVVHKWAPQVEILS---HRSVSVFLSH 357 (473)
Q Consensus 281 ~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~---~~~v~~~I~H 357 (473)
.+++-.|++.. .+.+. .+ ..+.+|+++-... ....+ ||...+|+|+.++.. .++..++.+-
T Consensus 179 ~~i~yaG~l~k--~~~L~----~l-~~~~~f~ivG~G~--------~~~l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~ 242 (339)
T 3rhz_A 179 REIHFPGNPER--FSFVK----EW-KYDIPLKVYTWQN--------VELPQ-NVHKINYRPDEQLLMEMSQGGFGLVWMD 242 (339)
T ss_dssp EEEEECSCTTT--CGGGG----GC-CCSSCEEEEESCC--------CCCCT-TEEEEECCCHHHHHHHHHTEEEEECCCC
T ss_pred cEEEEeCCcch--hhHHH----hC-CCCCeEEEEeCCc--------ccCcC-CEEEeCCCCHHHHHHHHHhCCEEEEECC
Confidence 45567788773 11111 11 2456666555322 11234 999999999877643 4455333323
Q ss_pred cCc---------chHHHHHhhCCcEEeccccccchhhHHHHHHhhcceEEEecCCCCccCHHHHHHHHHHHHcCChhhHH
Q 047833 358 CGW---------NSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEIGVCVEVARGKSSEVLKKDIAAKIELVMNETEKGIE 428 (473)
Q Consensus 358 GG~---------gt~~eal~~GvP~l~~P~~~DQ~~nA~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~ 428 (473)
+.+ +-+.|++++|+|+|+.+ ...++..+++. |+|+.++ +.+++.+++.++..+ +.++
T Consensus 243 ~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~-~~G~~~~-------~~~e~~~~i~~l~~~--~~~~ 308 (339)
T 3rhz_A 243 DKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENN-GLGWIVK-------DVEEAIMKVKNVNED--EYIE 308 (339)
T ss_dssp GGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHH-TCEEEES-------SHHHHHHHHHHCCHH--HHHH
T ss_pred CchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhC-CeEEEeC-------CHHHHHHHHHHhCHH--HHHH
Confidence 322 34789999999999854 56788888888 9999884 257888888886432 5668
Q ss_pred HHHHHHHHHHHHHHhcccccccCCcHHHHHHHHHHH
Q 047833 429 LRKNAYEVREIIKNAFKNEENFQGSSVKAMNQFLNA 464 (473)
Q Consensus 429 ~~~~a~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 464 (473)
+++||++++++++. +--..+++.+.+.+
T Consensus 309 m~~na~~~a~~~~~--------~~f~k~~l~~~~~~ 336 (339)
T 3rhz_A 309 LVKNVRSFNPILRK--------GFFTRRLLTESVFQ 336 (339)
T ss_dssp HHHHHHHHTHHHHT--------THHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhc--------cHHHHHHHHHHHHH
Confidence 99999999999862 33355555555543
No 55
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=96.16 E-value=0.18 Score=47.04 Aligned_cols=135 Identities=12% Similarity=0.004 Sum_probs=76.2
Q ss_pred CCeEEEEeeCCcc---cCCHHHHHHHHHHHHhCCCceEEEECCCCCCCccccccccCCcEEEeccc---ChHHhhccCCc
Q 047833 278 YTSVLYVSFGSQN---TIATSQMMQLAMALEASGKNFIWVVRPPIGFDINSEIKCSGQGLVVHKWA---PQVEILSHRSV 351 (473)
Q Consensus 278 ~~~~V~vs~GS~~---~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~v---p~~~ll~~~~v 351 (473)
+++.|.+.-|+.. .++.+.+.++++.|.+.++++++..|.+.+..........-.++.+.+-. .-.+++++++
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~e~~~~~~i~~~~~~~~l~g~~sl~el~ali~~a~- 255 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHEEERAKRLAEGFAYVEVLPKMSLEGVARVLAGAK- 255 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHHHHHHHHHHHTTCTTEEECCCCCHHHHHHHHHTCS-
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHHHHHHHHHHHhhCCcccccCCCCHHHHHHHHHhCC-
Confidence 3557777777754 26678888888888777888777655321000000010111234343322 2467788877
Q ss_pred ceeEec-cCcchHHHHHhhCCcEEec--cccccchhhHHHHHHhhcce-EEEe--cCCCCccCHHHHHHHHHHHHcCC
Q 047833 352 SVFLSH-CGWNSVLEALSHGVPIIGW--PLAAEQFYNSKLLEEEIGVC-VEVA--RGKSSEVLKKDIAAKIELVMNET 423 (473)
Q Consensus 352 ~~~I~H-GG~gt~~eal~~GvP~l~~--P~~~DQ~~nA~~v~~~lG~g-~~l~--~~~~~~~~~~~l~~~i~~ll~~~ 423 (473)
++|+. .|. ++=|...|+|+|++ |.... .++ -+|-. ..+. ..-...++.+++.+++.++|++.
T Consensus 256 -l~I~~DSG~--~HlAaa~g~P~v~lfg~t~p~--~~~-----P~~~~~~~~~~~~~cm~~I~~~~V~~~i~~~l~~~ 323 (326)
T 2gt1_A 256 -FVVSVDTGL--SHLTAALDRPNITVYGPTDPG--LIG-----GYGKNQMVCRAPGNELSQLTANAVKQFIEENAEKA 323 (326)
T ss_dssp -EEEEESSHH--HHHHHHTTCCEEEEESSSCHH--HHC-----CCSSSEEEEECGGGCGGGCCHHHHHHHHHHTTTTC
T ss_pred -EEEecCCcH--HHHHHHcCCCEEEEECCCChh--hcC-----CCCCCceEecCCcccccCCCHHHHHHHHHHHHHHh
Confidence 58888 444 44466699999988 32111 110 00111 1111 00125789999999999999865
No 56
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=94.97 E-value=0.1 Score=50.51 Aligned_cols=80 Identities=18% Similarity=0.076 Sum_probs=55.8
Q ss_pred CCcEEEecccChH---HhhccCCcceeEec---cCc-chHHHHHhhCCcEEeccccccchhhHHHHHHhhcceEEEecCC
Q 047833 331 GQGLVVHKWAPQV---EILSHRSVSVFLSH---CGW-NSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEIGVCVEVARGK 403 (473)
Q Consensus 331 ~~nv~~~~~vp~~---~ll~~~~v~~~I~H---GG~-gt~~eal~~GvP~l~~P~~~DQ~~nA~~v~~~lG~g~~l~~~~ 403 (473)
..+|.+.+++|+. .+++.+++ ||.- =|. .++.||+++|+|+|+ -..+ ....++.. ..|+.++.
T Consensus 294 ~~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~~-~~G~lv~~-- 363 (413)
T 2x0d_A 294 GIHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNWH-SNIVSLEQ-- 363 (413)
T ss_dssp TEEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGTB-TTEEEESS--
T ss_pred cCcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhcC-CCEEEeCC--
Confidence 4689999999865 45666775 6642 244 467999999999998 3222 12333422 35776654
Q ss_pred CCccCHHHHHHHHHHHHcCC
Q 047833 404 SSEVLKKDIAAKIELVMNET 423 (473)
Q Consensus 404 ~~~~~~~~l~~~i~~ll~~~ 423 (473)
-+.++|+++|.++++|+
T Consensus 364 ---~d~~~la~ai~~ll~~~ 380 (413)
T 2x0d_A 364 ---LNPENIAETLVELCMSF 380 (413)
T ss_dssp ---CSHHHHHHHHHHHHHHT
T ss_pred ---CCHHHHHHHHHHHHcCH
Confidence 57899999999999988
No 57
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=91.26 E-value=0.53 Score=41.78 Aligned_cols=40 Identities=25% Similarity=0.200 Sum_probs=27.7
Q ss_pred CcEEEEEcCCCccCHHH-HHHHHHHHHhCCCcEEEEEcCCcchhh
Q 047833 5 KETIVLFPFMAQGHIIP-FLALALHLEKTNKYTITFVNTPLNLRK 48 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p-~l~La~~L~~~rGh~Vt~~~~~~~~~~ 48 (473)
|+|||+.-= -|--.| +..|+++|++ .|| |+++.|...+.-
T Consensus 1 Mp~ILlTND--DGi~apGi~~L~~~l~~-~g~-V~VvAP~~~~Sg 41 (251)
T 2wqk_A 1 MPTFLLVND--DGYFSPGINALREALKS-LGR-VVVVAPDRNLSG 41 (251)
T ss_dssp -CEEEEECS--SCTTCHHHHHHHHHHTT-TSE-EEEEEESSCCTT
T ss_pred CCEEEEEcC--CCCCcHHHHHHHHHHHh-CCC-EEEEeeCCCCcc
Confidence 567887753 344445 6678999999 985 888887776543
No 58
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=91.04 E-value=1.7 Score=43.53 Aligned_cols=133 Identities=11% Similarity=-0.062 Sum_probs=74.3
Q ss_pred EEEEeeCCccc-CCHHHHHHHHHHHHhCCCceEEEECCCCCCCcc--c-cccccCCcEEEecccChH---HhhccCCcce
Q 047833 281 VLYVSFGSQNT-IATSQMMQLAMALEASGKNFIWVVRPPIGFDIN--S-EIKCSGQGLVVHKWAPQV---EILSHRSVSV 353 (473)
Q Consensus 281 ~V~vs~GS~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~--~-~~~~~~~nv~~~~~vp~~---~ll~~~~v~~ 353 (473)
.+++..|.+.. ...+.+...+..+.+.+.++++..... +.... . .....+.++.+....+.. .+++.+++
T Consensus 328 p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD~-- 404 (536)
T 3vue_A 328 PLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGK-KKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADV-- 404 (536)
T ss_dssp CEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBC-HHHHHHHHHHHHHSTTTEEEECSCCHHHHHHHHHHCSE--
T ss_pred cEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccC-chHHHHHHHHHhhcCCceEEEEeccHHHHHHHHHhhhe--
Confidence 45566787765 334554444444445566766554322 00000 0 123446788888887754 45667775
Q ss_pred eEec---cCc-chHHHHHhhCCcEEeccccccchhhHHHHHHhhcceEEEecC-----CCCccCHHHHHHHHHHHHc
Q 047833 354 FLSH---CGW-NSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEIGVCVEVARG-----KSSEVLKKDIAAKIELVMN 421 (473)
Q Consensus 354 ~I~H---GG~-gt~~eal~~GvP~l~~P~~~DQ~~nA~~v~~~lG~g~~l~~~-----~~~~~~~~~l~~~i~~ll~ 421 (473)
||.- =|+ .+++||+++|+|+|+.... .....|.+- .-|...... -....+.+.|.++|+++++
T Consensus 405 ~v~PS~~E~fgl~~lEAma~G~PvI~s~~g----G~~e~V~dg-~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~ 476 (536)
T 3vue_A 405 LAVPSRFEPCGLIQLQGMRYGTPCACASTG----GLVDTVIEG-KTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIK 476 (536)
T ss_dssp EEECCSCCSSCSHHHHHHHTTCCEEECSCT----HHHHHCCBT-TTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHH
T ss_pred eecccccCCCCHHHHHHHHcCCCEEEcCCC----CchheeeCC-CCccccccCCCceeEECCCCHHHHHHHHHHHHH
Confidence 6542 244 4889999999999987542 333333322 223322210 0023457889999998875
No 59
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=90.72 E-value=0.74 Score=40.64 Aligned_cols=42 Identities=19% Similarity=0.040 Sum_probs=29.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhh
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLRKL 49 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v 49 (473)
|+|||+.-=-+. |---+..|+++|++ .| +|+++.|...+.-.
T Consensus 1 ~M~ILlTNDDGi-~apGi~aL~~~l~~-~g-~V~VVAP~~~~Sg~ 42 (251)
T 2phj_A 1 MPTFLLVNDDGY-FSPGINALREALKS-LG-RVVVVAPDRNLSGV 42 (251)
T ss_dssp -CEEEEECSSCT-TCHHHHHHHHHHTT-TS-EEEEEEESSCCTTS
T ss_pred CCEEEEECCCCC-CCHHHHHHHHHHHh-cC-CEEEEecCCCccCC
Confidence 357777664322 33446788999999 88 99999988865443
No 60
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=85.76 E-value=8.7 Score=37.71 Aligned_cols=112 Identities=13% Similarity=0.074 Sum_probs=72.3
Q ss_pred cEEEecccChH---HhhccCCcceeEe--ccCcc-hHHHHHhhC---CcEEeccccccchhhHHHHHHhhcceEEEecCC
Q 047833 333 GLVVHKWAPQV---EILSHRSVSVFLS--HCGWN-SVLEALSHG---VPIIGWPLAAEQFYNSKLLEEEIGVCVEVARGK 403 (473)
Q Consensus 333 nv~~~~~vp~~---~ll~~~~v~~~I~--HGG~g-t~~eal~~G---vP~l~~P~~~DQ~~nA~~v~~~lG~g~~l~~~~ 403 (473)
.|++...+|+. +++..+++ ++++ +=|+| +..|++++| .|+|+--+.+ .+..+. .-|+.+++
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv-~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l~---~~allVnP-- 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL-LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVLG---EYCRSVNP-- 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE-EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHHG---GGSEEECT--
T ss_pred CEEEeCCCCHHHHHHHHHhccE-EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHhC---CCEEEECC--
Confidence 57777788864 55556776 3444 45887 457999996 6666554332 122221 24777766
Q ss_pred CCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhcccccccCCcHHHHHHHHHHHHHhh
Q 047833 404 SSEVLKKDIAAKIELVMNETEKGIELRKNAYEVREIIKNAFKNEENFQGSSVKAMNQFLNAASMV 468 (473)
Q Consensus 404 ~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 468 (473)
.+.+.++++|.++|+.+.+ +-+++.+++.+.++ .-....-.+.|++.|+..
T Consensus 423 ---~D~~~lA~AI~~aL~m~~~--er~~r~~~~~~~V~---------~~d~~~W~~~fl~~L~~~ 473 (496)
T 3t5t_A 423 ---FDLVEQAEAISAALAAGPR--QRAEAAARRRDAAR---------PWTLEAWVQAQLDGLAAD 473 (496)
T ss_dssp ---TBHHHHHHHHHHHHHCCHH--HHHHHHHHHHHHHT---------TCBHHHHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHHcCCHH--HHHHHHHHHHHHHH---------HCCHHHHHHHHHHHHhhc
Confidence 5889999999999998721 34455555555553 233678888888888654
No 61
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=85.09 E-value=5.2 Score=34.85 Aligned_cols=106 Identities=6% Similarity=-0.021 Sum_probs=63.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCC--CcEEEEEcCCc-ch---hhhhccCCCCCCceEEecCCCCCCCCCCCC
Q 047833 3 QRKETIVLFPFMAQGHIIPFLALALHLEKTN--KYTITFVNTPL-NL---RKLKSSVPQNSSINLLEIPFDSIDHNLPPC 76 (473)
Q Consensus 3 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~r--Gh~Vt~~~~~~-~~---~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~ 76 (473)
.+|+||+|+.+|+.. -+.++.++|.+ . +|+|..+.+.. .. +..++ .++.+..+... .+
T Consensus 20 ~~~~rI~~l~SG~g~---~~~~~l~~l~~-~~~~~~I~~Vvt~~~~~~~~~~A~~-----~gIp~~~~~~~----~~--- 83 (229)
T 3auf_A 20 GHMIRIGVLISGSGT---NLQAILDGCRE-GRIPGRVAVVISDRADAYGLERARR-----AGVDALHMDPA----AY--- 83 (229)
T ss_dssp TTCEEEEEEESSCCH---HHHHHHHHHHT-TSSSEEEEEEEESSTTCHHHHHHHH-----TTCEEEECCGG----GS---
T ss_pred CCCcEEEEEEeCCcH---HHHHHHHHHHh-CCCCCeEEEEEcCCCchHHHHHHHH-----cCCCEEEECcc----cc---
Confidence 457799998776643 36677778887 5 78886655442 21 23334 66666654411 01
Q ss_pred CCCCCCCChhhHHHHHHHHHhhhHHHHHHHHhHhhhcCCCCccEEEECCCcc-hHHHHHHHhCCceEEEecc
Q 047833 77 TENTDSVPYHLVSKLIEATLSFKPHFKKLVNDLIDEQNGYKPLCIITDMFFG-WCKEIAQEYGIFHAIFIGG 147 (473)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~-~~~~~A~~~giP~v~~~~~ 147 (473)
.. . +...+.+.+.+++. +||+||+-.+.. -...+-+.....++.++++
T Consensus 84 -------~~---r------~~~~~~~~~~l~~~-------~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpS 132 (229)
T 3auf_A 84 -------PS---R------TAFDAALAERLQAY-------GVDLVCLAGYMRLVRGPMLTAFPNRILNIHPS 132 (229)
T ss_dssp -------SS---H------HHHHHHHHHHHHHT-------TCSEEEESSCCSCCCHHHHHHSTTCEEEEESS
T ss_pred -------cc---h------hhccHHHHHHHHhc-------CCCEEEEcChhHhCCHHHHhhccCCEEEEccC
Confidence 00 0 12234556778888 899999986643 3344556666677887654
No 62
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=83.51 E-value=0.68 Score=46.42 Aligned_cols=39 Identities=10% Similarity=0.163 Sum_probs=29.2
Q ss_pred CCCcEEEEEcC--------CCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 3 QRKETIVLFPF--------MAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 3 ~~~~~il~~~~--------~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
.+.+||+++++ |+.|++ .-.|.++|++ +||+|++++|..
T Consensus 7 ~~~MkIl~vs~E~~P~~K~GGLadv--v~~L~~aL~~-~G~~V~Vi~P~Y 53 (536)
T 3vue_A 7 HHHMNVVFVGAEMAPWSKTGGLGDV--LGGLPPAMAA-NGHRVMVISPRY 53 (536)
T ss_dssp -CCCEEEEECSCBTTTBCSSHHHHH--HHHHHHHHHT-TTCEEEEEEECC
T ss_pred CCCcEEEEEEEeccchhccCcHHHH--HHHHHHHHHH-cCCeEEEEecCc
Confidence 35789999874 334444 4578999999 999999998543
No 63
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=82.70 E-value=7.5 Score=33.37 Aligned_cols=105 Identities=7% Similarity=0.065 Sum_probs=61.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCC--CcEEEEEcCCc-c---hhhhhccCCCCCCceEEecCCCCCCCCCCCCC
Q 047833 4 RKETIVLFPFMAQGHIIPFLALALHLEKTN--KYTITFVNTPL-N---LRKLKSSVPQNSSINLLEIPFDSIDHNLPPCT 77 (473)
Q Consensus 4 ~~~~il~~~~~~~GH~~p~l~La~~L~~~r--Gh~Vt~~~~~~-~---~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 77 (473)
+|+||+++-+|+.+ -+.++.++|.+ . +|+|..+.+.. . .+..++ .++.+..+... .+
T Consensus 2 ~m~ki~vl~sG~g~---~~~~~l~~l~~-~~l~~~I~~Vit~~~~~~v~~~A~~-----~gIp~~~~~~~----~~---- 64 (212)
T 3av3_A 2 HMKRLAVFASGSGT---NFQAIVDAAKR-GDLPARVALLVCDRPGAKVIERAAR-----ENVPAFVFSPK----DY---- 64 (212)
T ss_dssp CCEEEEEECCSSCH---HHHHHHHHHHT-TCCCEEEEEEEESSTTCHHHHHHHH-----TTCCEEECCGG----GS----
T ss_pred CCcEEEEEEECCcH---HHHHHHHHHHh-CCCCCeEEEEEeCCCCcHHHHHHHH-----cCCCEEEeCcc----cc----
Confidence 35688877776643 25566778887 6 79997666443 2 222334 56666544311 00
Q ss_pred CCCCCCChhhHHHHHHHHHhhhHHHHHHHHhHhhhcCCCCccEEEECCCcc-hHHHHHHHhCCceEEEecc
Q 047833 78 ENTDSVPYHLVSKLIEATLSFKPHFKKLVNDLIDEQNGYKPLCIITDMFFG-WCKEIAQEYGIFHAIFIGG 147 (473)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~-~~~~~A~~~giP~v~~~~~ 147 (473)
.. -+...+.+.+.+++. +||++|+-.+.. -...+-+.....++.++++
T Consensus 65 ------~~---------~~~~~~~~~~~l~~~-------~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 113 (212)
T 3av3_A 65 ------PS---------KAAFESEILRELKGR-------QIDWIALAGYMRLIGPTLLSAYEGKIVNIHPS 113 (212)
T ss_dssp ------SS---------HHHHHHHHHHHHHHT-------TCCEEEESSCCSCCCHHHHHHTTTCEEEEESS
T ss_pred ------cc---------hhhhHHHHHHHHHhc-------CCCEEEEchhhhhCCHHHHhhhcCCEEEEecC
Confidence 00 011234556778888 899999886543 3345556666678888664
No 64
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=81.76 E-value=4.6 Score=34.84 Aligned_cols=104 Identities=11% Similarity=0.056 Sum_probs=58.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCc--EEEEEcCCc-c---hhhhhccCCCCCCceEEecCCCCCCCCCCCCCC
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLEKTNKY--TITFVNTPL-N---LRKLKSSVPQNSSINLLEIPFDSIDHNLPPCTE 78 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~~~rGh--~Vt~~~~~~-~---~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 78 (473)
|+||+|+.+|+.. -+.++.++|.+ .+| +|..+.+.. . .+..++ .++.+..+... .+
T Consensus 1 m~rI~vl~SG~g~---~~~~~l~~l~~-~~~~~~i~~Vvs~~~~~~~~~~A~~-----~gIp~~~~~~~----~~----- 62 (216)
T 2ywr_A 1 MLKIGVLVSGRGS---NLQAIIDAIES-GKVNASIELVISDNPKAYAIERCKK-----HNVECKVIQRK----EF----- 62 (216)
T ss_dssp CEEEEEEECSCCH---HHHHHHHHHHT-TSSCEEEEEEEESCTTCHHHHHHHH-----HTCCEEECCGG----GS-----
T ss_pred CCEEEEEEeCCcH---HHHHHHHHHHh-CCCCCeEEEEEeCCCChHHHHHHHH-----cCCCEEEeCcc----cc-----
Confidence 3589888766543 36677788888 888 776554332 2 122334 45555543310 00
Q ss_pred CCCCCChhhHHHHHHHHHhhhHHHHHHHHhHhhhcCCCCccEEEECCCcc-hHHHHHHHhCCceEEEecc
Q 047833 79 NTDSVPYHLVSKLIEATLSFKPHFKKLVNDLIDEQNGYKPLCIITDMFFG-WCKEIAQEYGIFHAIFIGG 147 (473)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~-~~~~~A~~~giP~v~~~~~ 147 (473)
.. -+...+.+.+.+++. +||+||+-.+.. -...+-+.....++.++++
T Consensus 63 -----~~---------r~~~~~~~~~~l~~~-------~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 111 (216)
T 2ywr_A 63 -----PS---------KKEFEERMALELKKK-------GVELVVLAGFMRILSHNFLKYFPNKVINIHPS 111 (216)
T ss_dssp -----SS---------HHHHHHHHHHHHHHT-------TCCEEEESSCCSCCCHHHHTTSTTCEEEEESS
T ss_pred -----cc---------hhhhhHHHHHHHHhc-------CCCEEEEeCchhhCCHHHHhhccCCeEEEcCC
Confidence 00 011234456778888 899999886543 2334444455567877654
No 65
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=80.87 E-value=6.4 Score=36.53 Aligned_cols=41 Identities=17% Similarity=0.167 Sum_probs=33.8
Q ss_pred CCcEEEEEcC-CCccCHHHHHHHHHHHHhCCCcEEEEEcCCcc
Q 047833 4 RKETIVLFPF-MAQGHIIPFLALALHLEKTNKYTITFVNTPLN 45 (473)
Q Consensus 4 ~~~~il~~~~-~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~ 45 (473)
++.+|+|++. |+.|-..-...+|..|++ +|++|.++...+.
T Consensus 14 ~~~~i~~~sgkGGvGKTt~a~~lA~~la~-~g~~vllid~D~~ 55 (334)
T 3iqw_A 14 RSLRWIFVGGKGGVGKTTTSCSLAIQLAK-VRRSVLLLSTDPA 55 (334)
T ss_dssp TTCCEEEEECSTTSSHHHHHHHHHHHHTT-SSSCEEEEECCSS
T ss_pred CCeEEEEEeCCCCccHHHHHHHHHHHHHh-CCCcEEEEECCCC
Confidence 3456665554 788999999999999999 9999999997753
No 66
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=80.12 E-value=11 Score=34.62 Aligned_cols=37 Identities=14% Similarity=0.099 Sum_probs=28.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcc
Q 047833 3 QRKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLN 45 (473)
Q Consensus 3 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~ 45 (473)
.+|+||+|+..+..+ +...++|.+ .||+|..+.+.+.
T Consensus 2 ~~mmrIvf~Gtp~fa-----~~~L~~L~~-~~~~v~~Vvt~pd 38 (317)
T 3rfo_A 2 NAMIKVVFMGTPDFS-----VPVLRRLIE-DGYDVIGVVTQPD 38 (317)
T ss_dssp CTTSEEEEECCSTTH-----HHHHHHHHH-TTCEEEEEECCCC
T ss_pred CCceEEEEEeCCHHH-----HHHHHHHHH-CCCcEEEEEeCCC
Confidence 468899999888554 345678889 9999988776553
No 67
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=80.07 E-value=6.4 Score=37.83 Aligned_cols=38 Identities=13% Similarity=0.139 Sum_probs=27.7
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 1 MAQRKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
|.++..||++++.+.... .+.+++++ .|++|+++....
T Consensus 1 M~~~~k~l~Il~~~~~~~-----~i~~aa~~-lG~~vv~v~~~~ 38 (425)
T 3vot_A 1 MTKRNKNLAIICQNKHLP-----FIFEEAER-LGLKVTFFYNSA 38 (425)
T ss_dssp -CCCCCEEEEECCCTTCC-----HHHHHHHH-TTCEEEEEEETT
T ss_pred CCCCCcEEEEECCChhHH-----HHHHHHHH-CCCEEEEEECCC
Confidence 888888999998654322 35678889 999999986544
No 68
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=78.49 E-value=2.3 Score=36.48 Aligned_cols=48 Identities=21% Similarity=0.116 Sum_probs=40.0
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhc
Q 047833 1 MAQRKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLRKLKS 51 (473)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v~~ 51 (473)
|+++ .||++.-.|+.|-+. ...|.+.|++ +|++|.++.++.....+..
T Consensus 1 m~~~-k~IllgvTGaiaa~k-~~~ll~~L~~-~g~eV~vv~T~~A~~fi~~ 48 (209)
T 3zqu_A 1 MSGP-ERITLAMTGASGAQY-GLRLLDCLVQ-EEREVHFLISKAAQLVMAT 48 (209)
T ss_dssp CCSC-SEEEEEECSSSCHHH-HHHHHHHHHH-TTCEEEEEECHHHHHHHHH
T ss_pred CCCC-CEEEEEEECHHHHHH-HHHHHHHHHH-CCCEEEEEECccHHHHHHH
Confidence 5554 588888888878777 8899999999 9999999999888777665
No 69
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=78.37 E-value=16 Score=30.84 Aligned_cols=37 Identities=14% Similarity=0.157 Sum_probs=32.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNT 42 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~ 42 (473)
+-.|++++..+.|-.+-.+.+|..... +|+.|.|+..
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g-~G~rV~~vQF 64 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVG-HGKNVGVVQF 64 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHH-TTCCEEEEES
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHH-CCCeEEEEEe
Confidence 457888999899999999999999999 9999999953
No 70
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=78.31 E-value=12 Score=32.96 Aligned_cols=39 Identities=15% Similarity=0.100 Sum_probs=27.0
Q ss_pred EEEEEcCCCccCHHH-HHHHHHHHHhCCCcEEEEEcCCcchhhh
Q 047833 7 TIVLFPFMAQGHIIP-FLALALHLEKTNKYTITFVNTPLNLRKL 49 (473)
Q Consensus 7 ~il~~~~~~~GH~~p-~l~La~~L~~~rGh~Vt~~~~~~~~~~v 49 (473)
|||+.-= -|=..| +..|+++|++ .| +|+++.|...+.-.
T Consensus 2 ~ILlTND--DGi~apGi~aL~~~l~~-~g-~V~VVAP~~~~Sg~ 41 (247)
T 1j9j_A 2 RILVTND--DGIQSKGIIVLAELLSE-EH-EVFVVAPDKERSAT 41 (247)
T ss_dssp EEEEECS--SCTTCHHHHHHHHHHTT-TS-EEEEEEESSCCTTC
T ss_pred eEEEEcC--CCCCcHhHHHHHHHHHh-CC-CEEEEecCCCCcCC
Confidence 5555543 233344 6788999999 88 89999988865443
No 71
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=78.06 E-value=1.4 Score=42.45 Aligned_cols=41 Identities=20% Similarity=0.211 Sum_probs=30.4
Q ss_pred CCCcEEEEEcCC-Cc----cCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 3 QRKETIVLFPFM-AQ----GHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 3 ~~~~~il~~~~~-~~----GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
.+++||++++.. .. |=......+|++|.+ +||+|++++...
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~-~GheV~Vvt~~~ 89 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGISTALKLFEQFDN-KKFKKRIILTDA 89 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCT-TTCEEEEEESSC
T ss_pred CCCceEEEEeCCCCccccccHHHHHHHHHHHHHH-cCCceEEEEecC
Confidence 356789866543 21 333568899999999 999999999764
No 72
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=77.27 E-value=8.6 Score=39.26 Aligned_cols=87 Identities=13% Similarity=0.159 Sum_probs=47.7
Q ss_pred HHhhccCCcceeEec---cCcc-hHHHHHhhCCcEEeccccccchhhHHHHHH-------hhcceEEEecCCCCccCHHH
Q 047833 343 VEILSHRSVSVFLSH---CGWN-SVLEALSHGVPIIGWPLAAEQFYNSKLLEE-------EIGVCVEVARGKSSEVLKKD 411 (473)
Q Consensus 343 ~~ll~~~~v~~~I~H---GG~g-t~~eal~~GvP~l~~P~~~DQ~~nA~~v~~-------~lG~g~~l~~~~~~~~~~~~ 411 (473)
.++++.+++ ||.- =|+| +.+||+++|+|+|+.-..+ ....+.+ . +-|+.+... ...+.++
T Consensus 513 ~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG----~~d~V~dg~~~~~~~-~tG~lV~~r--d~~d~ee 583 (725)
T 3nb0_A 513 DEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVSG----FGSYMEDLIETNQAK-DYGIYIVDR--RFKAPDE 583 (725)
T ss_dssp HHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTBH----HHHHHHTTSCHHHHH-HTTEEEECC--SSSCHHH
T ss_pred HHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCCC----hhhhhhccccccCCC-CceEEEeCC--CCCCHHH
Confidence 457888775 6543 4554 8899999999999976533 1112211 1 346655430 2334444
Q ss_pred ----HHHHHHHHHc-CChhhHHHHHHHHHHHH
Q 047833 412 ----IAAKIELVMN-ETEKGIELRKNAYEVRE 438 (473)
Q Consensus 412 ----l~~~i~~ll~-~~~~~~~~~~~a~~l~~ 438 (473)
|++++.++++ +++..+.++++++++++
T Consensus 584 ~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~ 615 (725)
T 3nb0_A 584 SVEQLVDYMEEFVKKTRRQRINQRNATEALSD 615 (725)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 4555554444 33233456666655544
No 73
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=76.54 E-value=2.9 Score=35.58 Aligned_cols=47 Identities=11% Similarity=-0.176 Sum_probs=36.7
Q ss_pred CCCCCcEEEEEcCCCccCHH-HHHHHHHHHHhCCCcEEEEEcCCcchhhh
Q 047833 1 MAQRKETIVLFPFMAQGHII-PFLALALHLEKTNKYTITFVNTPLNLRKL 49 (473)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~-p~l~La~~L~~~rGh~Vt~~~~~~~~~~v 49 (473)
|.-++.||++.-.|+ +..+ -.+.+.+.|++ +|++|.++.++.....+
T Consensus 3 m~l~~k~I~lgiTGs-~aa~~k~~~ll~~L~~-~g~eV~vv~T~~A~~~i 50 (201)
T 3lqk_A 3 MNFAGKHVGFGLTGS-HCTYHEVLPQMERLVE-LGAKVTPFVTHTVQTTD 50 (201)
T ss_dssp CCCTTCEEEEECCSC-GGGGGGTHHHHHHHHH-TTCEEEEECSSCSCCTT
T ss_pred CCcCCCEEEEEEECh-HHHHHHHHHHHHHHhh-CCCEEEEEEChhHHHHH
Confidence 444567898888887 4445 78999999999 99999999887754443
No 74
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=75.35 E-value=10 Score=34.07 Aligned_cols=39 Identities=13% Similarity=-0.008 Sum_probs=27.2
Q ss_pred EEEEEcCCCccCHHH-HHHHHHHHHhCCCcEEEEEcCCcchhhh
Q 047833 7 TIVLFPFMAQGHIIP-FLALALHLEKTNKYTITFVNTPLNLRKL 49 (473)
Q Consensus 7 ~il~~~~~~~GH~~p-~l~La~~L~~~rGh~Vt~~~~~~~~~~v 49 (473)
|||+.-= -|=..| +..|+++|++ .| +|+++.|...+.-.
T Consensus 2 ~ILlTND--DGi~ApGi~aL~~aL~~-~g-~V~VVAP~~~qSg~ 41 (280)
T 1l5x_A 2 KILVTND--DGVHSPGLRLLYQFALS-LG-DVDVVAPESPKSAT 41 (280)
T ss_dssp EEEEECS--SCTTCHHHHHHHHHHGG-GS-EEEEEEESSCTTTS
T ss_pred eEEEEcC--CCCCcHhHHHHHHHHHh-CC-CEEEEecCCCCcCC
Confidence 5655543 233344 6788999999 88 89999988865443
No 75
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=75.30 E-value=3.4 Score=32.69 Aligned_cols=42 Identities=17% Similarity=0.116 Sum_probs=35.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchh
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLR 47 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~ 47 (473)
+.+|++.+.++-+|-....-++..|+. .|++|++.+.....+
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l~~-~G~~Vi~lG~~~p~e 44 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAFTN-AGFNVVNIGVLSPQE 44 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHH-TTCEEEEEEEEECHH
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHHHH-CCCEEEECCCCCCHH
Confidence 358999999999999999999999999 999999887544433
No 76
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=74.12 E-value=19 Score=32.98 Aligned_cols=34 Identities=18% Similarity=-0.106 Sum_probs=25.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
++||+|+..+. ..+...++|.+ +||+|..+.+.+
T Consensus 7 ~mrivf~Gt~~-----fa~~~L~~L~~-~~~~v~~Vvt~p 40 (318)
T 3q0i_A 7 SLRIVFAGTPD-----FAARHLAALLS-SEHEIIAVYTQP 40 (318)
T ss_dssp CCEEEEECCSH-----HHHHHHHHHHT-SSSEEEEEECCC
T ss_pred CCEEEEEecCH-----HHHHHHHHHHH-CCCcEEEEEcCC
Confidence 57999998763 33456688999 999998776654
No 77
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=73.74 E-value=17 Score=35.65 Aligned_cols=109 Identities=15% Similarity=0.082 Sum_probs=67.3
Q ss_pred EE-EecccChHH---hhccCCcceeEe---ccCcc-hHHHHHhhCC-----cEEeccccccchhhHHHHHHhhcceEEEe
Q 047833 334 LV-VHKWAPQVE---ILSHRSVSVFLS---HCGWN-SVLEALSHGV-----PIIGWPLAAEQFYNSKLLEEEIGVCVEVA 400 (473)
Q Consensus 334 v~-~~~~vp~~~---ll~~~~v~~~I~---HGG~g-t~~eal~~Gv-----P~l~~P~~~DQ~~nA~~v~~~lG~g~~l~ 400 (473)
++ +.+++++.+ ++..+++ ||. .=|.| ++.||+++|+ |+|+.-..+--.. + .-|+.++
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~----l----~~g~lv~ 402 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANE----L----TSALIVN 402 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGT----C----TTSEEEC
T ss_pred EEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHH----h----CCeEEEC
Confidence 44 467888664 5566775 543 34665 7889999998 6666544321111 1 2356665
Q ss_pred cCCCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhcccccccCCcHHHHHHHHHHHHHhh
Q 047833 401 RGKSSEVLKKDIAAKIELVMNETEKGIELRKNAYEVREIIKNAFKNEENFQGSSVKAMNQFLNAASMV 468 (473)
Q Consensus 401 ~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 468 (473)
+ .+.++++++|.++|+++.+ +-+++.++..+.++ + -+.....+.+++.+++.
T Consensus 403 p-----~d~~~lA~ai~~lL~~~~~--~r~~~~~~~~~~v~--------~-~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 403 P-----YDRDEVAAALDRALTMSLA--ERISRHAEMLDVIV--------K-NDINHWQECFISDLKQI 454 (482)
T ss_dssp T-----TCHHHHHHHHHHHHTCCHH--HHHHHHHHHHHHHH--------H-TCHHHHHHHHHHHHHHS
T ss_pred C-----CCHHHHHHHHHHHHcCCHH--HHHHHHHHHHHHHH--------h-CCHHHHHHHHHHHHHhc
Confidence 4 5789999999999997511 23333344444443 1 23677888888888765
No 78
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=72.74 E-value=7.7 Score=33.34 Aligned_cols=108 Identities=17% Similarity=0.212 Sum_probs=61.2
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCC-CcEEEEEcCCcc----hhhhhccCCCCCCceEEecCCCCCCCCCCC
Q 047833 1 MAQRKETIVLFPFMAQGHIIPFLALALHLEKTN-KYTITFVNTPLN----LRKLKSSVPQNSSINLLEIPFDSIDHNLPP 75 (473)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~r-Gh~Vt~~~~~~~----~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~ 75 (473)
|..+++||+++.+|+.+-+.- |.+++++ . +++|..+.+... .+..++ .++.+..++.. .+
T Consensus 1 ~~~~~~riavl~SG~Gsnl~a---ll~~~~~-~~~~eI~~Vis~~~~a~~~~~A~~-----~gIp~~~~~~~----~~-- 65 (215)
T 3tqr_A 1 MNREPLPIVVLISGNGTNLQA---IIGAIQK-GLAIEIRAVISNRADAYGLKRAQQ-----ADIPTHIIPHE----EF-- 65 (215)
T ss_dssp ---CCEEEEEEESSCCHHHHH---HHHHHHT-TCSEEEEEEEESCTTCHHHHHHHH-----TTCCEEECCGG----GS--
T ss_pred CCCCCcEEEEEEeCCcHHHHH---HHHHHHc-CCCCEEEEEEeCCcchHHHHHHHH-----cCCCEEEeCcc----cc--
Confidence 777888999887776554443 4444444 2 588887665332 123344 66666655411 11
Q ss_pred CCCCCCCCChhhHHHHHHHHHhhhHHHHHHHHhHhhhcCCCCccEEEECCCcc-hHHHHHHHhCCceEEEecc
Q 047833 76 CTENTDSVPYHLVSKLIEATLSFKPHFKKLVNDLIDEQNGYKPLCIITDMFFG-WCKEIAQEYGIFHAIFIGG 147 (473)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~-~~~~~A~~~giP~v~~~~~ 147 (473)
+. + ....+.+.+.+++. +||+||+-.+.. -...+-+.....++.++++
T Consensus 66 --------~~---r------~~~d~~~~~~l~~~-------~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 114 (215)
T 3tqr_A 66 --------PS---R------TDFESTLQKTIDHY-------DPKLIVLAGFMRKLGKAFVSHYSGRMINIHPS 114 (215)
T ss_dssp --------SS---H------HHHHHHHHHHHHTT-------CCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred --------Cc---h------hHhHHHHHHHHHhc-------CCCEEEEccchhhCCHHHHhhccCCeEEeCcc
Confidence 00 0 11234567778888 999999986643 3345555666677887664
No 79
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=71.86 E-value=3.8 Score=33.46 Aligned_cols=41 Identities=12% Similarity=0.180 Sum_probs=36.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcc
Q 047833 4 RKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLN 45 (473)
Q Consensus 4 ~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~ 45 (473)
++.+|++.+.++-+|-....-++..|+. .|++|++.+....
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~-~G~eVi~lG~~~p 57 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRD-AGFEVVYTGLRQT 57 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHH-TTCEEECCCSBCC
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHH-CCCEEEECCCCCC
Confidence 4679999999999999999999999999 9999999875543
No 80
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=71.23 E-value=4.9 Score=34.59 Aligned_cols=105 Identities=7% Similarity=0.020 Sum_probs=58.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHH-hCCCcEEEEEcCCcch---hhhhccCCCCCCceEEecCCCCCCCCCCCCCCC
Q 047833 4 RKETIVLFPFMAQGHIIPFLALALHLE-KTNKYTITFVNTPLNL---RKLKSSVPQNSSINLLEIPFDSIDHNLPPCTEN 79 (473)
Q Consensus 4 ~~~~il~~~~~~~GH~~p~l~La~~L~-~~rGh~Vt~~~~~~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 79 (473)
.|+||+++.+|+.+-+..++ +++. . .+++|..+.+.... +..++ .++.+...+.. ..
T Consensus 11 ~~~ri~vl~SG~gsnl~all---~~~~~~-~~~eI~~Vis~~~a~~~~~A~~-----~gIp~~~~~~~----~~------ 71 (215)
T 3da8_A 11 APARLVVLASGTGSLLRSLL---DAAVGD-YPARVVAVGVDRECRAAEIAAE-----ASVPVFTVRLA----DH------ 71 (215)
T ss_dssp SSEEEEEEESSCCHHHHHHH---HHSSTT-CSEEEEEEEESSCCHHHHHHHH-----TTCCEEECCGG----GS------
T ss_pred CCcEEEEEEeCChHHHHHHH---HHHhcc-CCCeEEEEEeCCchHHHHHHHH-----cCCCEEEeCcc----cc------
Confidence 36699988877655444444 3332 3 45788776655432 23334 56666555310 00
Q ss_pred CCCCChhhHHHHHHHHHhhhHHHHHHHHhHhhhcCCCCccEEEECCCcc-hHHHHHHHhCCceEEEecc
Q 047833 80 TDSVPYHLVSKLIEATLSFKPHFKKLVNDLIDEQNGYKPLCIITDMFFG-WCKEIAQEYGIFHAIFIGG 147 (473)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~-~~~~~A~~~giP~v~~~~~ 147 (473)
.. + ....+.+.+.+++. +||+||+-.+.. -...+-+.....++.++++
T Consensus 72 ----~~---r------~~~d~~~~~~l~~~-------~~Dlivlagy~~iL~~~~l~~~~~~~iNiHpS 120 (215)
T 3da8_A 72 ----PS---R------DAWDVAITAATAAH-------EPDLVVSAGFMRILGPQFLSRFYGRTLNTHPA 120 (215)
T ss_dssp ----SS---H------HHHHHHHHHHHHTT-------CCSEEEEEECCSCCCHHHHHHHTTTEEEEESS
T ss_pred ----cc---h------hhhhHHHHHHHHhh-------CCCEEEEcCchhhCCHHHHhhccCCeEEeCcc
Confidence 00 0 11234567778888 999998875543 2334445555567887654
No 81
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=70.83 E-value=5.1 Score=33.72 Aligned_cols=44 Identities=25% Similarity=0.175 Sum_probs=37.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhc
Q 047833 6 ETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLRKLKS 51 (473)
Q Consensus 6 ~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v~~ 51 (473)
.||++.-.|+.|-+ =...+.+.|++ +|++|.++.++.....+..
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~-~g~~V~vv~T~~A~~~i~~ 45 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEE-LDFSVDLVISRNAKVVLKE 45 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHH-TTCEEEEEECHHHHHHHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHH-CCCEEEEEEChhHHHHhhH
Confidence 48998888888855 57899999999 9999999999888777765
No 82
>2p90_A Hypothetical protein CGL1923; structural genomics, PSI-2, MCSG structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032} SCOP: c.56.8.1
Probab=70.44 E-value=50 Score=30.16 Aligned_cols=181 Identities=9% Similarity=0.016 Sum_probs=78.2
Q ss_pred CeEEEEeeCCcccCC-HHHHHHHHHHHHhCCCceEEEECCCCCCCccccccccCCcEEEecccChHHhhccCCc--ceeE
Q 047833 279 TSVLYVSFGSQNTIA-TSQMMQLAMALEASGKNFIWVVRPPIGFDINSEIKCSGQGLVVHKWAPQVEILSHRSV--SVFL 355 (473)
Q Consensus 279 ~~~V~vs~GS~~~~~-~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~v--~~~I 355 (473)
+++++++ |...... .++...+++-+++.+.+-|+.++.- +.+...+.|..+..... ...++..... +-..
T Consensus 102 ~~~lll~-gpeP~~~w~~f~~~vl~~a~~~gV~~vv~Lggl----~~~~phtrp~~V~~~at--~~~l~~~~~~~~~~~~ 174 (319)
T 2p90_A 102 KPFLMLS-GPEPDLRWGDFSNAVVDLVEKFGVENTICLYAA----PMTVPHTRPTVVTAHGN--STDRLKDQVSLDTRMT 174 (319)
T ss_dssp CEEEEEE-EECCSBCHHHHHHHHHHHHHHTTCCEEEEEEEE----EESCCTTSCCCEEEEES--SGGGCSSCCCCCCCEE
T ss_pred CeEEEEE-CCCChHHHHHHHHHHHHHHHHcCCCEEEEEeCc----cCCCCCCCCCCeEEEeC--CHHHHhhhhccccCcE
Confidence 4566665 5554444 5778889999999999988887621 00011223334443222 1222211110 0112
Q ss_pred eccCcchHH--HHHhhCCcEEec----cccc---cchhhHHHH----HHhhcceEEEecCCCCccCHHHHHHHHHHHHcC
Q 047833 356 SHCGWNSVL--EALSHGVPIIGW----PLAA---EQFYNSKLL----EEEIGVCVEVARGKSSEVLKKDIAAKIELVMNE 422 (473)
Q Consensus 356 ~HGG~gt~~--eal~~GvP~l~~----P~~~---DQ~~nA~~v----~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~~ 422 (473)
--||..++. +|...|.|.+++ |++. +.|.=|..+ .+.+|+-+-+.. -.-.++++.+.|+++.+.
T Consensus 175 ipggi~glL~~~~~~~Gi~a~~l~~~vphYl~~~pdP~AA~~lL~~l~~l~gl~id~~~---L~e~A~~~e~~i~~l~~~ 251 (319)
T 2p90_A 175 VPGSASLMLEKLLKDKGKNVSGYTVHVPHYVSASPYPAATLKLLQSIADSADLNLPLLA---LERDAEKVHRQLMEQTEE 251 (319)
T ss_dssp ECCCHHHHHHHHHHHTTCCEEEEEEEEEGGGTTSCCHHHHHHHHHHHHHHHTCCCCCHH---HHHHHHHHHHHHHHHHHH
T ss_pred EeccHHHHHHHHHHHCCCCEEEEEEecCcccCCCCCHHHHHHHHHHHHHHHCCCCCHHH---HHHHHHHHHHHHHHHHHh
Confidence 235665554 567899998774 4322 444444333 344444443332 333446677888888865
Q ss_pred ChhhHHHHHHHHHHHHHHHHhcccc-----c-ccCC--cHHHHHHHHHHHHHhhh
Q 047833 423 TEKGIELRKNAYEVREIIKNAFKNE-----E-NFQG--SSVKAMNQFLNAASMVK 469 (473)
Q Consensus 423 ~~~~~~~~~~a~~l~~~~~~~~~~~-----~-~~~g--~~~~~~~~~~~~~~~~~ 469 (473)
..+..+|-+..++=.+...++..+. . .+.+ +...-..+|.++|++..
T Consensus 252 ~~e~~~~V~~LE~~~D~~~~~~~~~~~~~~~~~~~~~ps~d~i~~efE~fL~~~~ 306 (319)
T 2p90_A 252 SSEIQRVVGALEQQYDSELERYRNRHPQAVMPGESELPSGDEIGAEFEKFLADLD 306 (319)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHCC--------------------------------
T ss_pred hHHHHHHHHHHHhhhhhhhhhhcccccccccccccCCCCHHHHHHHHHHHHHhcC
Confidence 4343344444444343433220000 0 0000 23555677888887653
No 83
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=70.27 E-value=7.5 Score=34.27 Aligned_cols=43 Identities=16% Similarity=0.080 Sum_probs=30.1
Q ss_pred CCCCCcEEEEEcCCCc----------c-CHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 1 MAQRKETIVLFPFMAQ----------G-HIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 1 ~~~~~~~il~~~~~~~----------G-H~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
|+..|+||+++..... | ...=++.-...|++ .|++|+++++..
T Consensus 5 m~~~mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~-aG~~V~~aSp~g 58 (247)
T 3n7t_A 5 MAPLPRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTA-AGFEVDVASETG 58 (247)
T ss_dssp --CCCSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHH-TTCEEEEEESSS
T ss_pred ccccCCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHH-CCCEEEEEeCCC
Confidence 5545778987766532 1 25557788899999 999999998643
No 84
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=69.74 E-value=6.7 Score=32.47 Aligned_cols=44 Identities=7% Similarity=0.097 Sum_probs=36.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhc
Q 047833 6 ETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLRKLKS 51 (473)
Q Consensus 6 ~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v~~ 51 (473)
.||++.-.|+.|=+. ...+.+.|++ +|++|.++.++.-.+.+..
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~-~g~~V~vv~T~~A~~fi~~ 49 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKS-KFDEVNVIASTNGRKFING 49 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTT-TCSEEEEEECTGGGGGSCH
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHH-CCCEEEEEECcCHHHHhhH
Confidence 488887777766664 8899999999 9999999998887666544
No 85
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=69.14 E-value=37 Score=31.78 Aligned_cols=38 Identities=8% Similarity=-0.019 Sum_probs=28.7
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 1 MAQRKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
|..+++||+++..+ .....+++++++ .||+|..+...+
T Consensus 7 m~~~~~~ili~g~g-----~~~~~~~~a~~~-~G~~v~~~~~~~ 44 (391)
T 1kjq_A 7 LRPAATRVMLLGSG-----ELGKEVAIECQR-LGVEVIAVDRYA 44 (391)
T ss_dssp TSTTCCEEEEESCS-----HHHHHHHHHHHT-TTCEEEEEESST
T ss_pred CCCCCCEEEEECCC-----HHHHHHHHHHHH-cCCEEEEEECCC
Confidence 55567899988553 235778999999 999998887544
No 86
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=69.03 E-value=4.6 Score=34.50 Aligned_cols=45 Identities=9% Similarity=-0.140 Sum_probs=32.4
Q ss_pred CCCCCcEEEEEcCCCccCHHH-HHHHHHHHHhCCCcEEEEEcCCcchh
Q 047833 1 MAQRKETIVLFPFMAQGHIIP-FLALALHLEKTNKYTITFVNTPLNLR 47 (473)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~p-~l~La~~L~~~rGh~Vt~~~~~~~~~ 47 (473)
|+-++.||++.-.|+ +..+- .+.+.+.|++ +|++|.++.++....
T Consensus 1 m~l~~k~IllgiTGs-iaayk~~~~ll~~L~~-~g~eV~vv~T~~A~~ 46 (207)
T 3mcu_A 1 MSLKGKRIGFGFTGS-HCTYEEVMPHLEKLIA-EGAEVRPVVSYTVQS 46 (207)
T ss_dssp -CCTTCEEEEEECSC-GGGGTTSHHHHHHHHH-TTCEEEEEECC----
T ss_pred CCCCCCEEEEEEECh-HHHHHHHHHHHHHHHh-CCCEEEEEEehHHHH
Confidence 444456898877776 45665 8899999999 999999999887543
No 87
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=67.74 E-value=9.5 Score=32.85 Aligned_cols=108 Identities=8% Similarity=0.061 Sum_probs=61.0
Q ss_pred CcEEEEEcCCCccCHHH----HHHHHHHHHhCCCcEEEEEcCCcc----hhhhhccCCCCCCceEEecCCCCCCCCCCCC
Q 047833 5 KETIVLFPFMAQGHIIP----FLALALHLEKTNKYTITFVNTPLN----LRKLKSSVPQNSSINLLEIPFDSIDHNLPPC 76 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p----~l~La~~L~~~rGh~Vt~~~~~~~----~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~ 76 (473)
|.+|+++.-...|.++| ++..|++|++..|-+|+.++.... .+.+...|. ..+ ..+..+ .+..
T Consensus 3 m~~ilV~~E~~~g~l~~~s~ell~~A~~La~~~g~~v~av~~G~~~~~~~~~~~~~Ga--d~v--~~v~~~----~~~~- 73 (217)
T 3ih5_A 3 ANNLFVYCEIEEGIVADVSLELLTKGRSLANELNCQLEAVVAGTGLKEIEKQILPYGV--DKL--HVFDAE----GLYP- 73 (217)
T ss_dssp CCCEEEECCEETTEECHHHHHHHHHHHHHHHHHTCCEEEEEEESCCTTTHHHHGGGTC--SEE--EEEECG----GGSS-
T ss_pred cccEEEEEECcCCEECHHHHHHHHHHHHHHHhcCCeEEEEEECCCHHHHHHHHHhcCC--CEE--EEecCc----cccc-
Confidence 55788777666677766 577788887623656655442221 122223222 111 112211 1100
Q ss_pred CCCCCCCChhhHHHHHHHHHhhhHHHHHHHHhHhhhcCCCCccEEEECCCcc---hHHHHHHHhCCceEEE
Q 047833 77 TENTDSVPYHLVSKLIEATLSFKPHFKKLVNDLIDEQNGYKPLCIITDMFFG---WCKEIAQEYGIFHAIF 144 (473)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~---~~~~~A~~~giP~v~~ 144 (473)
.. .......+.+++++. +||+|+...... .+..+|..+++|.+.-
T Consensus 74 ------~~----------~~~~a~~l~~~i~~~-------~p~~Vl~g~t~~G~~laprlAa~L~~~~~sd 121 (217)
T 3ih5_A 74 ------YT----------SLPHTSILVNLFKEE-------QPQICLMGATVIGRDLGPRVSSALTSGLTAD 121 (217)
T ss_dssp ------CC----------HHHHHHHHHHHHHHH-------CCSEEEEECSHHHHHHHHHHHHHTTCCCBCS
T ss_pred ------CC----------HHHHHHHHHHHHHhc-------CCCEEEEeCCcchhhHHHHHHHHhCCCccce
Confidence 00 022345556778888 899999987554 2457899999999874
No 88
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=67.61 E-value=33 Score=33.25 Aligned_cols=33 Identities=9% Similarity=0.030 Sum_probs=28.2
Q ss_pred HHHHHHhHhhhcCCCCccEEEECCCcchHHHHHHHhCCceEEE
Q 047833 102 FKKLVNDLIDEQNGYKPLCIITDMFFGWCKEIAQEYGIFHAIF 144 (473)
Q Consensus 102 ~~~~l~~~~~~~~~~~pD~Vv~d~~~~~~~~~A~~~giP~v~~ 144 (473)
+++++++. +||++|.+.. ...+|+++|||++.+
T Consensus 367 le~~i~~~-------~pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 367 LEHAARAG-------QAQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp HHHHHHHH-------TCSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred HHHHHHhc-------CCCEEEEChh---HHHHHHHcCCCEEEe
Confidence 56778888 9999999865 578999999999986
No 89
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=67.56 E-value=24 Score=30.85 Aligned_cols=55 Identities=13% Similarity=0.108 Sum_probs=32.6
Q ss_pred EEEEEcCCCccCHHH-HHHHHHHHHhCCCcEEEEEcCCcchhhhhccCCCCCCceEEecC
Q 047833 7 TIVLFPFMAQGHIIP-FLALALHLEKTNKYTITFVNTPLNLRKLKSSVPQNSSINLLEIP 65 (473)
Q Consensus 7 ~il~~~~~~~GH~~p-~l~La~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~ 65 (473)
|||+.-= -|=..| +..|+++|++ .| +|+++.|...+.-.-....-...+++..++
T Consensus 2 ~ILlTND--DGi~apGi~aL~~~l~~-~g-~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~ 57 (244)
T 2e6c_A 2 RILVTND--DGIYSPGLWALAEAASQ-FG-EVFVAAPDTEQSAAGHAITIAHPVRAYPHP 57 (244)
T ss_dssp EEEEECS--SCTTCHHHHHHHHHHTT-TS-EEEEEEECSSCCCCCSSCCCSSCBEEEECC
T ss_pred eEEEEcC--CCCCcHhHHHHHHHHHh-CC-CEEEEecCCCCcCCcccccCCCCeEEEEec
Confidence 5655543 233444 6788999999 88 899999888654333211100445555554
No 90
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=66.67 E-value=29 Score=31.71 Aligned_cols=34 Identities=12% Similarity=-0.163 Sum_probs=24.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 047833 4 RKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTP 43 (473)
Q Consensus 4 ~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~ 43 (473)
+++||+|+..+.. .....++|.+ .||+|..+.+.
T Consensus 2 ~~mrIvf~Gt~~f-----a~~~L~~L~~-~~~~i~~Vvt~ 35 (314)
T 1fmt_A 2 ESLRIIFAGTPDF-----AARHLDALLS-SGHNVVGVFTQ 35 (314)
T ss_dssp CCCEEEEEECSHH-----HHHHHHHHHH-TTCEEEEEECC
T ss_pred CCCEEEEEecCHH-----HHHHHHHHHH-CCCcEEEEEeC
Confidence 3578999887643 3555678888 89999866654
No 91
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=66.52 E-value=7.7 Score=33.13 Aligned_cols=43 Identities=23% Similarity=0.159 Sum_probs=37.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhh
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLRK 48 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~ 48 (473)
+.+|++.+.++-.|-....-++..|+. +|++|.+++.....+.
T Consensus 88 ~~~vll~~~~gd~H~iG~~~va~~l~~-~G~~v~~LG~~vp~~~ 130 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGKNLVAMMLES-GGFTVYNLGVDIEPGK 130 (210)
T ss_dssp CCEEEEEEBTTCCCCHHHHHHHHHHHH-TTCEEEECCSSBCHHH
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHH-CCCEEEECCCCCCHHH
Confidence 568999999999999999999999999 9999999887654443
No 92
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=66.09 E-value=4.7 Score=38.07 Aligned_cols=37 Identities=14% Similarity=-0.005 Sum_probs=31.0
Q ss_pred CcEEEEEcC-CCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 047833 5 KETIVLFPF-MAQGHIIPFLALALHLEKTNKYTITFVNT 42 (473)
Q Consensus 5 ~~~il~~~~-~~~GH~~p~l~La~~L~~~rGh~Vt~~~~ 42 (473)
|++|++++. |+.|-..-...+|..|++ +|++|.++..
T Consensus 1 M~~i~~~~gkGG~GKTt~a~~la~~la~-~g~~vllvd~ 38 (374)
T 3igf_A 1 MALILTFLGKSGVARTKIAIAAAKLLAS-QGKRVLLAGL 38 (374)
T ss_dssp -CEEEEEECSBHHHHHHHHHHHHHHHHH-TTCCEEEEEC
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHH-CCCCeEEEeC
Confidence 457776655 677999999999999999 9999999987
No 93
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=66.04 E-value=21 Score=32.66 Aligned_cols=35 Identities=14% Similarity=-0.029 Sum_probs=26.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcc
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLN 45 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~ 45 (473)
++||+|+..+..+ +...++|.+ .||+|..+.+.+.
T Consensus 2 ~mrivf~Gtp~fa-----~~~L~~L~~-~~~~v~~Vvt~pd 36 (314)
T 3tqq_A 2 SLKIVFAGTPQFA-----VPTLRALID-SSHRVLAVYTQPD 36 (314)
T ss_dssp CCEEEEEECSGGG-----HHHHHHHHH-SSSEEEEEECCCC
T ss_pred CcEEEEECCCHHH-----HHHHHHHHH-CCCeEEEEEeCCC
Confidence 4699999888555 345678889 9999987776543
No 94
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=65.92 E-value=20 Score=33.85 Aligned_cols=35 Identities=9% Similarity=-0.031 Sum_probs=27.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 4 RKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 4 ~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
++.||+++..+.. .+++++++++ .|++|+++..+.
T Consensus 6 ~~~~ilI~g~g~~-----~~~~~~a~~~-~G~~~v~v~~~~ 40 (403)
T 4dim_A 6 DNKRLLILGAGRG-----QLGLYKAAKE-LGIHTIAGTMPN 40 (403)
T ss_dssp CCCEEEEECCCGG-----GHHHHHHHHH-HTCEEEEEECSS
T ss_pred CCCEEEEECCcHh-----HHHHHHHHHH-CCCEEEEEcCCC
Confidence 3568999887754 3679999999 999999997543
No 95
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=65.81 E-value=22 Score=32.82 Aligned_cols=100 Identities=11% Similarity=-0.079 Sum_probs=54.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcc--------hhhhhccCCCCCCceEEecCCCCCCCCCCCCC
Q 047833 6 ETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLN--------LRKLKSSVPQNSSINLLEIPFDSIDHNLPPCT 77 (473)
Q Consensus 6 ~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~--------~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 77 (473)
+||+|+.. -+....+.++|.+ .||+|..+.+.+. .+..++ .++.+..... +..
T Consensus 23 mrIvf~G~-----~~fa~~~L~~L~~-~~~~i~~Vvt~pd~~~~~~~v~~~A~~-----~gIpv~~~~~------~~~-- 83 (329)
T 2bw0_A 23 MKIAVIGQ-----SLFGQEVYCHLRK-EGHEVVGVFTVPDKDGKADPLGLEAEK-----DGVPVFKYSR------WRA-- 83 (329)
T ss_dssp CEEEEECC-----HHHHHHHHHHHHH-TTCEEEEEEECCCCSSCCCHHHHHHHH-----HTCCEEECSC------CEE--
T ss_pred CEEEEEcC-----cHHHHHHHHHHHH-CCCeEEEEEeCCCcCCCCCHHHHHHHH-----cCCCEEecCc------ccc--
Confidence 68998831 1333456789999 9999987665221 122222 3444443321 000
Q ss_pred CCCCCCChhhHHHHHHHHHhhhHHHHHHHHhHhhhcCCCCccEEEECCCcc-hHHHHHHHhCCceEEEecch
Q 047833 78 ENTDSVPYHLVSKLIEATLSFKPHFKKLVNDLIDEQNGYKPLCIITDMFFG-WCKEIAQEYGIFHAIFIGGG 148 (473)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~-~~~~~A~~~giP~v~~~~~~ 148 (473)
. ....+.+.+.+++. +||++|+-.+.. -...+-+.....++.++++.
T Consensus 84 ----~-------------~~~~~~~~~~l~~~-------~~Dliv~a~y~~ilp~~il~~~~~g~iNiHpSL 131 (329)
T 2bw0_A 84 ----K-------------GQALPDVVAKYQAL-------GAELNVLPFCSQFIPMEIISAPRHGSIIYHPSL 131 (329)
T ss_dssp ----T-------------TEECHHHHHHHHTT-------CCSEEEESSCSSCCCHHHHTCSTTCEEEEESSC
T ss_pred ----c-------------ccccHHHHHHHHhc-------CCCEEEEeehhhhCCHHHHhhCcCCEEEEcCCc
Confidence 0 01123455667777 899999886533 22334444455678877653
No 96
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=65.75 E-value=39 Score=28.81 Aligned_cols=102 Identities=12% Similarity=0.073 Sum_probs=59.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCC--CcEEEEEcCCcc----hhhhhccCCCCCCceEEecCCCCCCCCCCCCCCCC
Q 047833 7 TIVLFPFMAQGHIIPFLALALHLEKTN--KYTITFVNTPLN----LRKLKSSVPQNSSINLLEIPFDSIDHNLPPCTENT 80 (473)
Q Consensus 7 ~il~~~~~~~GH~~p~l~La~~L~~~r--Gh~Vt~~~~~~~----~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 80 (473)
||+++.++..+ -+-+|.+++.+ . +|+|..+.+... .+..++ .++.+..++.. .+.
T Consensus 2 ri~vl~Sg~gs---nl~ali~~~~~-~~~~~~i~~Vis~~~~~~~~~~A~~-----~gIp~~~~~~~----~~~------ 62 (212)
T 1jkx_A 2 NIVVLISGNGS---NLQAIIDACKT-NKIKGTVRAVFSNKADAFGLERARQ-----AGIATHTLIAS----AFD------ 62 (212)
T ss_dssp EEEEEESSCCH---HHHHHHHHHHT-TSSSSEEEEEEESCTTCHHHHHHHH-----TTCEEEECCGG----GCS------
T ss_pred EEEEEEECCcH---HHHHHHHHHHc-CCCCceEEEEEeCCCchHHHHHHHH-----cCCcEEEeCcc----ccc------
Confidence 68777666553 35667777777 4 688876654432 223334 66666654311 010
Q ss_pred CCCChhhHHHHHHHHHhhhHHHHHHHHhHhhhcCCCCccEEEECCCcc-hHHHHHHHhCCceEEEecc
Q 047833 81 DSVPYHLVSKLIEATLSFKPHFKKLVNDLIDEQNGYKPLCIITDMFFG-WCKEIAQEYGIFHAIFIGG 147 (473)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~-~~~~~A~~~giP~v~~~~~ 147 (473)
. + ....+.+.+.+++. +||+||+-.+.. -...+-+.....++.++++
T Consensus 63 ----~---r------~~~~~~~~~~l~~~-------~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 110 (212)
T 1jkx_A 63 ----S---R------EAYDRELIHEIDMY-------APDVVVLAGFMRILSPAFVSHYAGRLLNIHPS 110 (212)
T ss_dssp ----S---H------HHHHHHHHHHHGGG-------CCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ----c---h------hhccHHHHHHHHhc-------CCCEEEEeChhhhCCHHHHhhccCCEEEEccC
Confidence 0 0 12234556778888 999999986643 3345556666678888664
No 97
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=65.36 E-value=6.1 Score=33.42 Aligned_cols=43 Identities=14% Similarity=0.058 Sum_probs=36.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCC-CcEEEEEcCCcchhhhhc
Q 047833 7 TIVLFPFMAQGHIIPFLALALHLEKTN-KYTITFVNTPLNLRKLKS 51 (473)
Q Consensus 7 ~il~~~~~~~GH~~p~l~La~~L~~~r-Gh~Vt~~~~~~~~~~v~~ 51 (473)
||++.-.|+.|-+. ...+.+.|++ + |++|.++.++.....+..
T Consensus 2 ~IllgvTGsiaa~k-~~~ll~~L~~-~~g~~V~vv~T~~A~~fi~~ 45 (197)
T 1sbz_A 2 KLIVGMTGATGAPL-GVALLQALRE-MPNVETHLVMSKWAKTTIEL 45 (197)
T ss_dssp EEEEEECSSSCHHH-HHHHHHHHHT-CTTCEEEEEECHHHHHHHHH
T ss_pred EEEEEEeChHHHHH-HHHHHHHHHh-ccCCEEEEEECchHHHHhHH
Confidence 78888778877765 8999999999 9 999999999888777764
No 98
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=64.04 E-value=60 Score=26.69 Aligned_cols=101 Identities=16% Similarity=0.083 Sum_probs=55.2
Q ss_pred hhhHhhhhcCCCCCeEEEEeeCC-cccCCHHHHHHHHHHHHhCCCceEEEECCCCCCCccccccccCCcEEEecccCh-H
Q 047833 266 TELCKKWLDTKPYTSVLYVSFGS-QNTIATSQMMQLAMALEASGKNFIWVVRPPIGFDINSEIKCSGQGLVVHKWAPQ-V 343 (473)
Q Consensus 266 ~~~~~~~l~~~~~~~~V~vs~GS-~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~-~ 343 (473)
..++-.+|.+. +...||.|. .. ......++..+.+-++|-+++......+ .... ...++++..+. .
T Consensus 34 A~~lg~~La~~---g~~lVsGGg~~G-----im~aa~~gAl~~gG~tigVlP~~~~~~~---~~~~-~~~i~~~~~~~Rk 101 (176)
T 2iz6_A 34 ANELGKQIATH---GWILLTGGRSLG-----VMHEAMKGAKEAGGTTIGVLPGPDTSEI---SDAV-DIPIVTGLGSARD 101 (176)
T ss_dssp HHHHHHHHHHT---TCEEEEECSSSS-----HHHHHHHHHHHTTCCEEEEECC-----C---CTTC-SEEEECCCCSSSC
T ss_pred HHHHHHHHHHC---CCEEEECCCccC-----HhHHHHHHHHHcCCEEEEEeCchhhhhh---ccCC-ceeEEcCCHHHHH
Confidence 35566666554 256667765 44 2333445555566677777753210000 1111 22444555552 2
Q ss_pred Hhh-ccCCcceeEeccCcchHH---HHHhhCCcEEecccc
Q 047833 344 EIL-SHRSVSVFLSHCGWNSVL---EALSHGVPIIGWPLA 379 (473)
Q Consensus 344 ~ll-~~~~v~~~I~HGG~gt~~---eal~~GvP~l~~P~~ 379 (473)
.++ ..++. .++--||.||.- |++.+++|++++|.|
T Consensus 102 ~~m~~~sda-~IvlpGg~GTL~E~~~al~~~kpV~~l~~~ 140 (176)
T 2iz6_A 102 NINALSSNV-LVAVGMGPGTAAEVALALKAKKPVVLLGTQ 140 (176)
T ss_dssp CCCGGGCSE-EEEESCCHHHHHHHHHHHHTTCCEEEESCC
T ss_pred HHHHHhCCE-EEEecCCccHHHHHHHHHHhCCcEEEEcCc
Confidence 222 34443 567789999765 557799999999984
No 99
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=63.89 E-value=10 Score=29.90 Aligned_cols=48 Identities=15% Similarity=0.068 Sum_probs=31.2
Q ss_pred CCCCCcEEE-EEcCCCccCHHH--HHHHHHHHHhCCCcEEEEEcCCcchhhh
Q 047833 1 MAQRKETIV-LFPFMAQGHIIP--FLALALHLEKTNKYTITFVNTPLNLRKL 49 (473)
Q Consensus 1 ~~~~~~~il-~~~~~~~GH~~p--~l~La~~L~~~rGh~Vt~~~~~~~~~~v 49 (473)
|+..|.|++ ++..+-+|+... .+.+|.++.+ .||+|.++-..+-...+
T Consensus 1 ~~~~Mkk~~ivv~~~P~g~~~~~~al~~a~a~~a-~~~~v~Vff~~DGV~~~ 51 (136)
T 2hy5_B 1 MSEVVKKFMYLNRKAPYGTIYAWEALEVVLIGAA-FDQDVCVLFLDDGVYQL 51 (136)
T ss_dssp ----CCEEEEEECSCTTTSSHHHHHHHHHHHHGG-GCCEEEEEECGGGGGGG
T ss_pred CccchhEEEEEEeCCCCCcHHHHHHHHHHHHHHh-CCCCEEEEEEhHHHHHH
Confidence 556666665 556666776554 5777999999 99999998866644333
No 100
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=63.05 E-value=32 Score=28.62 Aligned_cols=37 Identities=24% Similarity=0.409 Sum_probs=30.3
Q ss_pred EEEEE-cCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 7 TIVLF-PFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 7 ~il~~-~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
.|+|+ +-|+-|=-.-...||..|.+ +|++|.++-..+
T Consensus 3 vi~v~s~kgG~GKTt~a~~la~~la~-~g~~vlliD~D~ 40 (206)
T 4dzz_A 3 VISFLNPKGGSGKTTAVINIATALSR-SGYNIAVVDTDP 40 (206)
T ss_dssp EEEECCSSTTSSHHHHHHHHHHHHHH-TTCCEEEEECCT
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHH-CCCeEEEEECCC
Confidence 45555 34788999999999999999 999999997654
No 101
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=62.63 E-value=43 Score=28.61 Aligned_cols=100 Identities=10% Similarity=0.033 Sum_probs=59.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCC--CcEEEEEcCCc-c---hhhhhccCCCCCCceEEecCCCCCCCCCCCCC
Q 047833 4 RKETIVLFPFMAQGHIIPFLALALHLEKTN--KYTITFVNTPL-N---LRKLKSSVPQNSSINLLEIPFDSIDHNLPPCT 77 (473)
Q Consensus 4 ~~~~il~~~~~~~GH~~p~l~La~~L~~~r--Gh~Vt~~~~~~-~---~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 77 (473)
+|.||+++.+|+.+- +.+|.+++.+ . +++|..+.+.. . .+..++ .++.+..++.. .
T Consensus 7 ~~~ri~vl~SG~gsn---l~all~~~~~-~~~~~~I~~Vis~~~~a~~l~~A~~-----~gIp~~~~~~~----~----- 68 (215)
T 3kcq_A 7 KELRVGVLISGRGSN---LEALAKAFST-EESSVVISCVISNNAEARGLLIAQS-----YGIPTFVVKRK----P----- 68 (215)
T ss_dssp CCEEEEEEESSCCHH---HHHHHHHTCC-C-CSEEEEEEEESCTTCTHHHHHHH-----TTCCEEECCBT----T-----
T ss_pred CCCEEEEEEECCcHH---HHHHHHHHHc-CCCCcEEEEEEeCCcchHHHHHHHH-----cCCCEEEeCcc----c-----
Confidence 467898777665433 4455666665 4 37888776532 2 123334 56666655411 0
Q ss_pred CCCCCCChhhHHHHHHHHHhhhHHHHHHHHhHhhhcCCCCccEEEECCCcc-hHHHHHHHhCCceEEEecc
Q 047833 78 ENTDSVPYHLVSKLIEATLSFKPHFKKLVNDLIDEQNGYKPLCIITDMFFG-WCKEIAQEYGIFHAIFIGG 147 (473)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~-~~~~~A~~~giP~v~~~~~ 147 (473)
.. .+.+.+.+++. +||+||+-.+.. -...+-+.....++.++++
T Consensus 69 -----~~--------------~~~~~~~L~~~-------~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpS 113 (215)
T 3kcq_A 69 -----LD--------------IEHISTVLREH-------DVDLVCLAGFMSILPEKFVTDWHHKIINIHPS 113 (215)
T ss_dssp -----BC--------------HHHHHHHHHHT-------TCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred -----CC--------------hHHHHHHHHHh-------CCCEEEEeCCceEeCHHHHhhccCCeEEECcc
Confidence 00 14567778888 999999886643 3345556666677887664
No 102
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=62.34 E-value=31 Score=29.35 Aligned_cols=104 Identities=13% Similarity=0.061 Sum_probs=58.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCC--CcEEEEEcCCc-c---hhhhhccCCCCCCceEEecCCCCCCCCCCCCCC
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLEKTN--KYTITFVNTPL-N---LRKLKSSVPQNSSINLLEIPFDSIDHNLPPCTE 78 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~~~r--Gh~Vt~~~~~~-~---~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 78 (473)
+.||+++.+|+.+- +.+|.+++.+ . .++|..+.+.. . .+..++ .++.+..++.. .+..
T Consensus 7 ~~ri~vl~SG~gsn---l~all~~~~~-~~l~~~I~~Visn~~~a~~l~~A~~-----~gIp~~~~~~~----~~~~--- 70 (209)
T 4ds3_A 7 RNRVVIFISGGGSN---MEALIRAAQA-PGFPAEIVAVFSDKAEAGGLAKAEA-----AGIATQVFKRK----DFAS--- 70 (209)
T ss_dssp CEEEEEEESSCCHH---HHHHHHHHTS-TTCSEEEEEEEESCTTCTHHHHHHH-----TTCCEEECCGG----GSSS---
T ss_pred CccEEEEEECCcHH---HHHHHHHHHc-CCCCcEEEEEEECCcccHHHHHHHH-----cCCCEEEeCcc----ccCC---
Confidence 45888777765443 4455566665 4 37888766532 2 123344 56666655411 0100
Q ss_pred CCCCCChhhHHHHHHHHHhhhHHHHHHHHhHhhhcCCCCccEEEECCCcc-hHHHHHHHhCCceEEEecc
Q 047833 79 NTDSVPYHLVSKLIEATLSFKPHFKKLVNDLIDEQNGYKPLCIITDMFFG-WCKEIAQEYGIFHAIFIGG 147 (473)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~-~~~~~A~~~giP~v~~~~~ 147 (473)
. ....+.+.+.+++. +||+||+-.+.. -...+-+.....++.++++
T Consensus 71 ------r----------~~~d~~~~~~l~~~-------~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 117 (209)
T 4ds3_A 71 ------K----------EAHEDAILAALDVL-------KPDIICLAGYMRLLSGRFIAPYEGRILNIHPS 117 (209)
T ss_dssp ------H----------HHHHHHHHHHHHHH-------CCSEEEESSCCSCCCHHHHGGGTTCEEEEESS
T ss_pred ------H----------HHHHHHHHHHHHhc-------CCCEEEEeccccCcCHHHHhhccCCeEEECCc
Confidence 0 11234667888888 999999886643 2334444555567777654
No 103
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=62.33 E-value=7.9 Score=32.25 Aligned_cols=44 Identities=7% Similarity=0.119 Sum_probs=35.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhc
Q 047833 6 ETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLRKLKS 51 (473)
Q Consensus 6 ~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v~~ 51 (473)
.||++.-.|+.|=+ -...+.+.|++ +|++|.++.++.....+..
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~-~g~~V~vv~T~~A~~fi~~ 46 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQ-HFDEVNILFSPSSKNFINT 46 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTT-TSSCEEEEECGGGGGTSCG
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHH-CCCEEEEEEchhHHHHHHH
Confidence 37887777776666 67899999999 9999999998887666554
No 104
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=61.75 E-value=8.9 Score=34.03 Aligned_cols=40 Identities=20% Similarity=0.128 Sum_probs=35.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 4 RKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 4 ~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
.+.+|++.+.++-.|-....-++..|+. +|++|++++...
T Consensus 122 ~~~~vlla~~~gd~HdiG~~iva~~L~~-~G~~Vi~LG~~v 161 (258)
T 2i2x_B 122 TKGTVVCHVAEGDVHDIGKNIVTALLRA-NGYNVVDLGRDV 161 (258)
T ss_dssp CSCEEEEEECTTCCCCHHHHHHHHHHHH-TTCEEEEEEEEC
T ss_pred CCCeEEEEeCCCCccHHHHHHHHHHHHH-CCCEEEECCCCC
Confidence 4568999999999999999999999999 999999987543
No 105
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=60.65 E-value=12 Score=31.86 Aligned_cols=44 Identities=20% Similarity=0.118 Sum_probs=37.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhc
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLRKLKS 51 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v~~ 51 (473)
+.||++...|+.+-+. ...|.+.|++ +| +|.++.++.....+..
T Consensus 19 ~k~IllgvTGsiaa~k-~~~ll~~L~~-~g-~V~vv~T~~A~~fv~~ 62 (209)
T 1mvl_A 19 KPRVLLAASGSVAAIK-FGNLCHCFTE-WA-EVRAVVTKSSLHFLDK 62 (209)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHHT-TS-EEEEEECTGGGGTCCG
T ss_pred CCEEEEEEeCcHHHHH-HHHHHHHHhc-CC-CEEEEEcchHHHhcCH
Confidence 4689988888888766 8999999999 99 9999998887666655
No 106
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=60.22 E-value=29 Score=30.80 Aligned_cols=41 Identities=10% Similarity=0.067 Sum_probs=32.0
Q ss_pred hHHHHHHHHhHhhhcCCCCccEEEECCCcc------hHHHHHHHhCCceEEEec
Q 047833 99 KPHFKKLVNDLIDEQNGYKPLCIITDMFFG------WCKEIAQEYGIFHAIFIG 146 (473)
Q Consensus 99 ~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~------~~~~~A~~~giP~v~~~~ 146 (473)
...+.+++++. +||+|++..-+. .+..+|..+|+|.+...+
T Consensus 101 a~~La~~i~~~-------~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 147 (264)
T 1o97_C 101 GRILTEVIKKE-------APDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVA 147 (264)
T ss_dssp HHHHHHHHHHH-------CCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHHhc-------CCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceE
Confidence 34556677777 899999986553 477999999999998653
No 107
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=60.00 E-value=16 Score=34.07 Aligned_cols=40 Identities=10% Similarity=0.057 Sum_probs=33.1
Q ss_pred CcEEEEEcC-CCccCHHHHHHHHHHHH--hCCCcEEEEEcCCcc
Q 047833 5 KETIVLFPF-MAQGHIIPFLALALHLE--KTNKYTITFVNTPLN 45 (473)
Q Consensus 5 ~~~il~~~~-~~~GH~~p~l~La~~L~--~~rGh~Vt~~~~~~~ 45 (473)
..+|++++. |+.|-..-...||..|+ + +|++|.++.....
T Consensus 17 ~~~i~~~~gkGGvGKTt~a~~lA~~la~~~-~g~~vllid~D~~ 59 (348)
T 3io3_A 17 SLKWIFVGGKGGVGKTTTSSSVAVQLALAQ-PNEQFLLISTDPA 59 (348)
T ss_dssp TCSEEEEECSTTSSHHHHHHHHHHHHHHHC-TTSCEEEEECCSS
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHHhc-CCCeEEEEECCCC
Confidence 346665554 78899999999999999 9 9999999998753
No 108
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=59.70 E-value=5.9 Score=35.53 Aligned_cols=53 Identities=15% Similarity=0.264 Sum_probs=38.1
Q ss_pred cceeEeccCcchHHHHHhh------CCcEEeccccccchhhHHHHHHhhcceEEEecCCCCccCHHHHHHHHHHHHcCC
Q 047833 351 VSVFLSHCGWNSVLEALSH------GVPIIGWPLAAEQFYNSKLLEEEIGVCVEVARGKSSEVLKKDIAAKIELVMNET 423 (473)
Q Consensus 351 v~~~I~HGG~gt~~eal~~------GvP~l~~P~~~DQ~~nA~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~~~ 423 (473)
++++|.=||-||+.+++.. ++|++.+|.. .+|.- ..+.++++.+++++++++.
T Consensus 36 ~D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G------------~lgfl--------~~~~~~~~~~~l~~l~~g~ 94 (272)
T 2i2c_A 36 PEIVISIGGDGTFLSAFHQYEERLDEIAFIGIHTG------------HLGFY--------ADWRPAEADKLVKLLAKGE 94 (272)
T ss_dssp CSEEEEEESHHHHHHHHHHTGGGTTTCEEEEEESS------------SCCSS--------CCBCGGGHHHHHHHHHTTC
T ss_pred CCEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCC------------CCCcC--------CcCCHHHHHHHHHHHHcCC
Confidence 3479999999999999875 8999999751 11321 2344567888888888764
No 109
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=59.17 E-value=79 Score=28.77 Aligned_cols=43 Identities=16% Similarity=0.181 Sum_probs=29.2
Q ss_pred cEEEEEcCCCcc---C--HHHHHHHHHHHHhCCCcEEEEEcCCcchhhh
Q 047833 6 ETIVLFPFMAQG---H--IIPFLALALHLEKTNKYTITFVNTPLNLRKL 49 (473)
Q Consensus 6 ~~il~~~~~~~G---H--~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v 49 (473)
..|++.|+...+ . ..-+..+++.|.+ +|++|.+++.+...+..
T Consensus 181 ~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~-~~~~vvl~g~~~e~~~~ 228 (348)
T 1psw_A 181 PMIGFCPGAEFGPAKRWPHYHYAELAKQLID-EGYQVVLFGSAKDHEAG 228 (348)
T ss_dssp CEEEEECCCTTCGGGSCCHHHHHHHHHHHHH-TTCEEEECCCGGGHHHH
T ss_pred cEEEEECCCCccccCCCCHHHHHHHHHHHHH-CCCeEEEEeChhhHHHH
Confidence 346666654222 2 2368899999999 99999998776654433
No 110
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=58.59 E-value=33 Score=31.28 Aligned_cols=33 Identities=12% Similarity=0.064 Sum_probs=24.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCC-C-cEEEEEcCCc
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLEKTN-K-YTITFVNTPL 44 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~~~r-G-h~Vt~~~~~~ 44 (473)
+++|+++..+.. ..+++.|++ . | ++|.++....
T Consensus 4 ~~~Ili~g~g~~------~~l~~~l~~-~~~~~~v~~~d~~~ 38 (331)
T 2pn1_A 4 KPHLLITSAGRR------AKLVEYFVK-EFKTGRVSTADCSP 38 (331)
T ss_dssp CCEEEEESCTTC------HHHHHHHHH-HCCSSEEEEEESCT
T ss_pred cceEEEecCCch------HHHHHHHHH-hcCCCEEEEEeCCC
Confidence 358999876654 478999988 5 6 8888875443
No 111
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=58.28 E-value=13 Score=31.93 Aligned_cols=45 Identities=13% Similarity=0.062 Sum_probs=38.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhh
Q 047833 4 RKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLRKL 49 (473)
Q Consensus 4 ~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v 49 (473)
.+.+|++.+.++-.|-....-++..|+. +|++|++.+.....+.+
T Consensus 91 ~~~~vll~~v~gd~HdiG~~iv~~~l~~-~G~~Vi~LG~~vp~e~i 135 (215)
T 3ezx_A 91 EAGLAITFVAEGDIHDIGHRLVTTMLGA-NGFQIVDLGVDVLNENV 135 (215)
T ss_dssp -CCEEEEEECTTCCCCHHHHHHHHHHHH-TSCEEEECCSSCCHHHH
T ss_pred CCCeEEEEeCCCChhHHHHHHHHHHHHH-CCCeEEEcCCCCCHHHH
Confidence 3569999999999999999999999999 99999999865544433
No 112
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=58.22 E-value=35 Score=31.59 Aligned_cols=99 Identities=15% Similarity=0.064 Sum_probs=57.6
Q ss_pred cEEEEEcCCCcc--C--HHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhccCCCCCCceEEecCCCCCCCCCCCCCCCCC
Q 047833 6 ETIVLFPFMAQG--H--IIPFLALALHLEKTNKYTITFVNTPLNLRKLKSSVPQNSSINLLEIPFDSIDHNLPPCTENTD 81 (473)
Q Consensus 6 ~~il~~~~~~~G--H--~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 81 (473)
.-|++.|+.+.. . ..-+..|++.|.+ +|++|.+++.+...+..++.... ..-....+. .
T Consensus 186 ~~i~i~pga~~~~k~wp~~~~~~l~~~l~~-~g~~vvl~g~~~e~~~~~~i~~~-~~~~~~~l~---------------g 248 (349)
T 3tov_A 186 ILIGFNIGSAVPEKRWPAERFAHVADYFGR-LGYKTVFFGGPMDLEMVQPVVEQ-METKPIVAT---------------G 248 (349)
T ss_dssp CEEEEECCCSSGGGCCCHHHHHHHHHHHHH-HTCEEEECCCTTTHHHHHHHHHT-CSSCCEECT---------------T
T ss_pred CEEEEeCCCCCccCCCCHHHHHHHHHHHHh-CCCeEEEEeCcchHHHHHHHHHh-cccccEEee---------------C
Confidence 346666665432 2 3458899999999 99999998877665544331100 000000000 0
Q ss_pred CCChhhHHHHHHHHHhhhHHHHHHHHhHhhhcCCCCccEEEECCCcchHHHHHHHhCCceEEEec
Q 047833 82 SVPYHLVSKLIEATLSFKPHFKKLVNDLIDEQNGYKPLCIITDMFFGWCKEIAQEYGIFHAIFIG 146 (473)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~~~~~~A~~~giP~v~~~~ 146 (473)
.. ...++..++.. .|++|+... +...+|..+|+|+|.++.
T Consensus 249 ~~--------------sl~e~~ali~~---------a~~~i~~Ds--G~~HlAaa~g~P~v~lfg 288 (349)
T 3tov_A 249 KF--------------QLGPLAAAMNR---------CNLLITNDS--GPMHVGISQGVPIVALYG 288 (349)
T ss_dssp CC--------------CHHHHHHHHHT---------CSEEEEESS--HHHHHHHTTTCCEEEECS
T ss_pred CC--------------CHHHHHHHHHh---------CCEEEECCC--CHHHHHHhcCCCEEEEEC
Confidence 01 11122334443 499998643 457889999999999854
No 113
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=57.62 E-value=5.8 Score=35.28 Aligned_cols=53 Identities=21% Similarity=0.340 Sum_probs=38.7
Q ss_pred cceeEeccCcchHHHHHhh---CCcEEeccccccchhhHHHHHHhhcceEEEecCCCCccCHHHHHHHHHHHHcCC
Q 047833 351 VSVFLSHCGWNSVLEALSH---GVPIIGWPLAAEQFYNSKLLEEEIGVCVEVARGKSSEVLKKDIAAKIELVMNET 423 (473)
Q Consensus 351 v~~~I~HGG~gt~~eal~~---GvP~l~~P~~~DQ~~nA~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~~~ 423 (473)
.+++|+=||-||+.++++. ++|++.++.. .+|.- ..+.++++.+++++++++.
T Consensus 42 ~D~vv~~GGDGTll~~a~~~~~~~PilGIn~G------------~~Gfl--------~~~~~~~~~~al~~i~~g~ 97 (258)
T 1yt5_A 42 ADLIVVVGGDGTVLKAAKKAADGTPMVGFKAG------------RLGFL--------TSYTLDEIDRFLEDLRNWN 97 (258)
T ss_dssp CSEEEEEECHHHHHHHHTTBCTTCEEEEEESS------------SCCSS--------CCBCGGGHHHHHHHHHTTC
T ss_pred CCEEEEEeCcHHHHHHHHHhCCCCCEEEEECC------------CCCcc--------CcCCHHHHHHHHHHHHcCC
Confidence 3479999999999999887 8898888632 11222 2345677888888888765
No 114
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=57.30 E-value=33 Score=30.16 Aligned_cols=40 Identities=15% Similarity=-0.010 Sum_probs=30.6
Q ss_pred HHHHHHHHhHhhhcCCCCccEEEECCCcc------hHHHHHHHhCCceEEEec
Q 047833 100 PHFKKLVNDLIDEQNGYKPLCIITDMFFG------WCKEIAQEYGIFHAIFIG 146 (473)
Q Consensus 100 ~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~------~~~~~A~~~giP~v~~~~ 146 (473)
..+.+++++. +||+|++..-+. .+..+|..+|+|.++...
T Consensus 103 ~~La~~i~~~-------~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 148 (252)
T 1efp_B 103 KILAAVARAE-------GTELIIAGKQAIDNDMNATGQMLAAILGWAQATFAS 148 (252)
T ss_dssp HHHHHHHHHH-------TCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHhc-------CCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEE
Confidence 4455667776 899999986543 477999999999998643
No 115
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=55.68 E-value=67 Score=27.25 Aligned_cols=103 Identities=10% Similarity=0.034 Sum_probs=56.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhC-CCcEEEEEcCCcch----hhhhccCCCCCCceEEecCCCCCCCCCCCCCCCCC
Q 047833 7 TIVLFPFMAQGHIIPFLALALHLEKT-NKYTITFVNTPLNL----RKLKSSVPQNSSINLLEIPFDSIDHNLPPCTENTD 81 (473)
Q Consensus 7 ~il~~~~~~~GH~~p~l~La~~L~~~-rGh~Vt~~~~~~~~----~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 81 (473)
||+++.+|+.+-+. +|.+.+++. .+|+|..+.+.... +..++ .++.+..+... .+
T Consensus 2 riaVl~SG~Gs~L~---aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~-----~gIp~~~~~~~----~~-------- 61 (209)
T 1meo_A 2 RVAVLISGTGSNLQ---ALIDSTREPNSSAQIDIVISNKAAVAGLDKAER-----AGIPTRVINHK----LY-------- 61 (209)
T ss_dssp EEEEEESSSCTTHH---HHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHH-----TTCCEEECCGG----GS--------
T ss_pred eEEEEEECCchHHH---HHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHH-----cCCCEEEECcc----cc--------
Confidence 78777766554443 444555551 27998777644422 22333 55565544310 00
Q ss_pred CCChhhHHHHHHHHHhhhHHHHHHHHhHhhhcCCCCccEEEECCCcc-hHHHHHHHhCCceEEEecc
Q 047833 82 SVPYHLVSKLIEATLSFKPHFKKLVNDLIDEQNGYKPLCIITDMFFG-WCKEIAQEYGIFHAIFIGG 147 (473)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~-~~~~~A~~~giP~v~~~~~ 147 (473)
.. . ....+.+.+.+++. +||+||+-.+.. -...+-+.....++.++++
T Consensus 62 --~~---r------~~~~~~~~~~l~~~-------~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 110 (209)
T 1meo_A 62 --KN---R------VEFDSAIDLVLEEF-------SIDIVCLAGFMRILSGPFVQKWNGKMLNIHPS 110 (209)
T ss_dssp --SS---H------HHHHHHHHHHHHHT-------TCCEEEEESCCSCCCHHHHHHTTTSEEEEESS
T ss_pred --Cc---h------hhhhHHHHHHHHhc-------CCCEEEEcchhhhCCHHHHhhhcCCEEEEccC
Confidence 00 0 11223456778888 899998876543 2344455566677887664
No 116
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=55.50 E-value=1.2e+02 Score=27.40 Aligned_cols=105 Identities=13% Similarity=0.120 Sum_probs=61.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhC-CCcEEEEEcCC--cchhhhhccCCCCCCceEEecCCCCCCCCCCCCCCCC
Q 047833 4 RKETIVLFPFMAQGHIIPFLALALHLEKT-NKYTITFVNTP--LNLRKLKSSVPQNSSINLLEIPFDSIDHNLPPCTENT 80 (473)
Q Consensus 4 ~~~~il~~~~~~~GH~~p~l~La~~L~~~-rGh~Vt~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 80 (473)
+++||+++.++. || -+-+|..+.++- -+.+|..+.+. ...+..++ .++.+..++.. . .
T Consensus 104 ~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A~~-----~gIp~~~~~~~----~--~----- 164 (302)
T 3o1l_A 104 QKKRVVLMASRE-SH--CLADLLHRWHSDELDCDIACVISNHQDLRSMVEW-----HDIPYYHVPVD----P--K----- 164 (302)
T ss_dssp SCCEEEEEECSC-CH--HHHHHHHHHHTTCSCSEEEEEEESSSTTHHHHHT-----TTCCEEECCCC----S--S-----
T ss_pred CCcEEEEEEeCC-ch--hHHHHHHHHHCCCCCcEEEEEEECcHHHHHHHHH-----cCCCEEEcCCC----c--C-----
Confidence 467998877765 54 355565555541 24677766542 23344444 67777776521 0 0
Q ss_pred CCCChhhHHHHHHHHHhhhHHHHHHHHhHhhhcCCCCccEEEECCCcc-hHHHHHHHhCCceEEEecc
Q 047833 81 DSVPYHLVSKLIEATLSFKPHFKKLVNDLIDEQNGYKPLCIITDMFFG-WCKEIAQEYGIFHAIFIGG 147 (473)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~-~~~~~A~~~giP~v~~~~~ 147 (473)
. . ....+.+.+++++. +||+||.-.+.. -...+-+.+.-.++.++++
T Consensus 165 -~-r-----------~~~~~~~~~~l~~~-------~~DliVlagym~IL~~~~l~~~~~~~INiHpS 212 (302)
T 3o1l_A 165 -D-K-----------EPAFAEVSRLVGHH-------QADVVVLARYMQILPPQLCREYAHQVINIHHS 212 (302)
T ss_dssp -C-C-----------HHHHHHHHHHHHHT-------TCSEEEESSCCSCCCTTHHHHTTTCEEEEESS
T ss_pred -C-H-----------HHHHHHHHHHHHHh-------CCCEEEHhHhhhhcCHHHHhhhhCCeEEeCcc
Confidence 0 0 11234567788888 999999986653 2334555556667887654
No 117
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=55.14 E-value=1e+02 Score=30.43 Aligned_cols=35 Identities=23% Similarity=0.208 Sum_probs=26.9
Q ss_pred HHHHHHHhHhhhcCCCCccEEEECCCcchHHHHHHHh-------CCceEEEe
Q 047833 101 HFKKLVNDLIDEQNGYKPLCIITDMFFGWCKEIAQEY-------GIFHAIFI 145 (473)
Q Consensus 101 ~~~~~l~~~~~~~~~~~pD~Vv~d~~~~~~~~~A~~~-------giP~v~~~ 145 (473)
.+.+++++. +||++|.... +..+|+.+ |||++.+.
T Consensus 429 ~l~~~i~~~-------~pDLlig~s~---~k~~a~~~~~~~~~~giP~irig 470 (523)
T 3u7q_B 429 HLRSLVFTD-------KPDFMIGNSY---GKFIQRDTLHKGKEFEVPLIRIG 470 (523)
T ss_dssp HHHHHHHHT-------CCSEEEECTT---HHHHHHHHHHHCGGGCCCEEECS
T ss_pred HHHHHHHhc-------CCCEEEECcc---HHHHHHHhhcccccCCCceEEec
Confidence 445667777 8999999965 45677777 99999863
No 118
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=54.82 E-value=8.4 Score=32.52 Aligned_cols=45 Identities=9% Similarity=-0.043 Sum_probs=36.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhc
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLRKLKS 51 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v~~ 51 (473)
+.||++...|+.|=+. ...+.+.|++ +|++|.++.++.....+..
T Consensus 8 ~k~IllgvTGs~aa~k-~~~l~~~L~~-~g~~V~vv~T~~A~~fi~~ 52 (194)
T 1p3y_1 8 DKKLLIGICGSISSVG-ISSYLLYFKS-FFKEIRVVMTKTAEDLIPA 52 (194)
T ss_dssp GCEEEEEECSCGGGGG-THHHHHHHTT-TSSEEEEEECHHHHHHSCH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHH-CCCEEEEEEchhHHHHHHH
Confidence 3588888888777665 7899999999 9999999998887666544
No 119
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=54.26 E-value=1.1e+02 Score=28.89 Aligned_cols=36 Identities=11% Similarity=0.020 Sum_probs=26.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 3 QRKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 3 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
..+++|+++..+ .-...++++|++ .||+|..+...+
T Consensus 17 ~~~~~ili~g~g-----~~g~~~~~a~~~-~G~~v~~v~~~~ 52 (433)
T 2dwc_A 17 DSAQKILLLGSG-----ELGKEIAIEAQR-LGVEVVAVDRYA 52 (433)
T ss_dssp TTCCEEEEESCS-----HHHHHHHHHHHH-TTCEEEEEESST
T ss_pred CCCCEEEEECCC-----HHHHHHHHHHHH-CCCEEEEEECCC
Confidence 345689988553 245678999999 999999887554
No 120
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=54.22 E-value=24 Score=30.42 Aligned_cols=67 Identities=10% Similarity=0.137 Sum_probs=46.8
Q ss_pred cceeEeccCcchHHHHHhhCCcEEeccccc-----------------------cchhhHHHHHHhhcceEEEecCCCCcc
Q 047833 351 VSVFLSHCGWNSVLEALSHGVPIIGWPLAA-----------------------EQFYNSKLLEEEIGVCVEVARGKSSEV 407 (473)
Q Consensus 351 v~~~I~HGG~gt~~eal~~GvP~l~~P~~~-----------------------DQ~~nA~~v~~~lG~g~~l~~~~~~~~ 407 (473)
++++|+.||.+.....- .++|+|-++..+ .....+..+.+.||+-+.... --
T Consensus 64 ~dVIISRGgta~~Lr~~-~~iPVV~I~vs~~Dil~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll~~~i~~~~----~~ 138 (225)
T 2pju_A 64 CDAIIAAGSNGAYLKSR-LSVPVILIKPSGYDVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRLDQRS----YI 138 (225)
T ss_dssp CSEEEEEHHHHHHHHTT-CSSCEEEECCCHHHHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCCEEEEE----ES
T ss_pred CeEEEeCChHHHHHHhh-CCCCEEEecCCHHHHHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHhCCceEEEE----eC
Confidence 45699999999888875 579999998742 233445556666666665543 45
Q ss_pred CHHHHHHHHHHHHcC
Q 047833 408 LKKDIAAKIELVMNE 422 (473)
Q Consensus 408 ~~~~l~~~i~~ll~~ 422 (473)
+++++.+.|.++..+
T Consensus 139 ~~ee~~~~i~~l~~~ 153 (225)
T 2pju_A 139 TEEDARGQINELKAN 153 (225)
T ss_dssp SHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHC
Confidence 677778888777654
No 121
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=53.14 E-value=5.4 Score=36.47 Aligned_cols=36 Identities=17% Similarity=0.248 Sum_probs=27.4
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCC-----C-cEEEEEcC
Q 047833 1 MAQRKETIVLFPFMAQGHIIPFLALALHLEKTN-----K-YTITFVNT 42 (473)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~r-----G-h~Vt~~~~ 42 (473)
|+.+++||.|+..|..|. .+|..|.+ . | |+|+++..
T Consensus 4 m~~~~m~I~iiG~G~mG~-----~~a~~L~~-~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 4 MNQQPIKIAVFGLGGVGG-----YYGAMLAL-RAAATDGLLEVSWIAR 45 (317)
T ss_dssp ---CCEEEEEECCSHHHH-----HHHHHHHH-HHHHTTSSEEEEEECC
T ss_pred CCCCCCEEEEECcCHHHH-----HHHHHHHh-CccccCCCCCEEEEEc
Confidence 666778999998887774 56888888 8 9 99999976
No 122
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=52.73 E-value=48 Score=28.20 Aligned_cols=105 Identities=8% Similarity=0.060 Sum_probs=57.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhC-CCcEEEEEcCCc-ch---hhhhccCCCCCCceEEecCCCCCCCCCCCCCCC
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLEKT-NKYTITFVNTPL-NL---RKLKSSVPQNSSINLLEIPFDSIDHNLPPCTEN 79 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~~~-rGh~Vt~~~~~~-~~---~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 79 (473)
|+||+++.+++ |+ -+-+|.++.++- -..+|.++.+.. .. +..++ .++.+..++.. .+..
T Consensus 2 m~riavl~Sg~-Gs--nl~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~~-----~gIp~~~~~~~----~~~~---- 65 (211)
T 3p9x_A 2 MKRVAIFASGS-GT--NAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKV-----HEIPVCALDPK----TYPS---- 65 (211)
T ss_dssp -CEEEEECCTT-CH--HHHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHHT-----TTCCEEECCGG----GSSS----
T ss_pred CCEEEEEEeCC-ch--HHHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHHH-----cCCCEEEeChh----hcCc----
Confidence 56898887775 42 255555555541 225777666542 21 22333 56666544411 0100
Q ss_pred CCCCChhhHHHHHHHHHhhhHHHHHHHHhHhhhcCCCCccEEEECCCcc-hHHHHHHHhCCceEEEecc
Q 047833 80 TDSVPYHLVSKLIEATLSFKPHFKKLVNDLIDEQNGYKPLCIITDMFFG-WCKEIAQEYGIFHAIFIGG 147 (473)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~-~~~~~A~~~giP~v~~~~~ 147 (473)
-....+.+.+.+++. +||+||+-.+.. -...+-+.....++.++++
T Consensus 66 ---------------r~~~d~~~~~~l~~~-------~~Dliv~agy~~Il~~~~l~~~~~~~iNiHpS 112 (211)
T 3p9x_A 66 ---------------KEAYEIEVVQQLKEK-------QIDFVVLAGYMRLVGPTLLGAYEGRIVNIHPS 112 (211)
T ss_dssp ---------------HHHHHHHHHHHHHHT-------TCCEEEESSCCSCCCHHHHHHHTTSEEEEESS
T ss_pred ---------------hhhhHHHHHHHHHhc-------CCCEEEEeCchhhcCHHHHhhccCCeEEECCc
Confidence 012234567778888 999999886643 3344555555667887654
No 123
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=51.26 E-value=27 Score=27.17 Aligned_cols=42 Identities=10% Similarity=-0.046 Sum_probs=30.7
Q ss_pred CcEEE-EEcCC--CccCHHHHHHHHHHHHhCCCcEEEEEcCCcchh
Q 047833 5 KETIV-LFPFM--AQGHIIPFLALALHLEKTNKYTITFVNTPLNLR 47 (473)
Q Consensus 5 ~~~il-~~~~~--~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~ 47 (473)
+.|++ ++..+ +.......+.+|....+ .||+|+++-+..-..
T Consensus 15 ~~kl~ii~~sgP~~~~~~~~al~lA~~A~a-~g~eV~vFf~~dGV~ 59 (134)
T 3mc3_A 15 XXXILIVVTHGPEDLDRTYAPLFMASISAS-MEYETSVFFMIXGPX 59 (134)
T ss_dssp CCEEEEEECCCGGGTHHHHHHHHHHHHHHH-TTCEEEEEECTTGGG
T ss_pred cceEEEEEccCCCCHHHHHHHHHHHHHHHH-CCCCEEEEEEeCcHH
Confidence 44665 44445 45677788899999999 999999887665443
No 124
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=51.19 E-value=11 Score=30.10 Aligned_cols=32 Identities=9% Similarity=0.251 Sum_probs=25.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 047833 6 ETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTP 43 (473)
Q Consensus 6 ~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~ 43 (473)
.||+++.. |++- ..+++.|.+ .||+|+++...
T Consensus 4 ~~vlI~G~---G~vG--~~la~~L~~-~g~~V~vid~~ 35 (153)
T 1id1_A 4 DHFIVCGH---SILA--INTILQLNQ-RGQNVTVISNL 35 (153)
T ss_dssp SCEEEECC---SHHH--HHHHHHHHH-TTCCEEEEECC
T ss_pred CcEEEECC---CHHH--HHHHHHHHH-CCCCEEEEECC
Confidence 47888754 4443 688999999 99999999864
No 125
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=50.36 E-value=35 Score=32.89 Aligned_cols=42 Identities=10% Similarity=0.016 Sum_probs=33.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhh
Q 047833 7 TIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLRK 48 (473)
Q Consensus 7 ~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~ 48 (473)
-+++...|+.|-..-.+.+|.......|..|.|++.+...+.
T Consensus 202 l~ii~G~pg~GKT~lal~ia~~~a~~~g~~vl~~slE~~~~~ 243 (444)
T 2q6t_A 202 LNIIAARPAMGKTAFALTIAQNAALKEGVGVGIYSLEMPAAQ 243 (444)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEEESSSCHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEECCCCHHH
Confidence 356777789999999999999887514899999998776543
No 126
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=50.21 E-value=20 Score=28.41 Aligned_cols=44 Identities=11% Similarity=0.138 Sum_probs=34.4
Q ss_pred EEE-EEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhc
Q 047833 7 TIV-LFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLRKLKS 51 (473)
Q Consensus 7 ~il-~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v~~ 51 (473)
+++ ++..+..-.+++.+.+|...++ .|++|+++.+-.-...+.+
T Consensus 9 kl~II~~sg~~d~~~~a~~lA~~Aaa-~g~eV~iF~t~~gv~~l~k 53 (144)
T 2qs7_A 9 KLSIIVFSGTIDKLMPVGILTSGAAA-SGYEVNLFFTFWGLQAITK 53 (144)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHHHHH-TTCEEEEEECHHHHHHTBH
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHHHH-cCCcEEEEEehHHHHHHhc
Confidence 554 5566678888999999999999 9999999987776544443
No 127
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=49.56 E-value=1e+02 Score=25.59 Aligned_cols=103 Identities=16% Similarity=0.031 Sum_probs=54.4
Q ss_pred hhhHhhhhcCCCCCeEEEEeeCCcccCCHHHHHHHHHHHHhCCCceEEEECCCCCCCccccccccCCcEEEecccCh--H
Q 047833 266 TELCKKWLDTKPYTSVLYVSFGSQNTIATSQMMQLAMALEASGKNFIWVVRPPIGFDINSEIKCSGQGLVVHKWAPQ--V 343 (473)
Q Consensus 266 ~~~~~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~--~ 343 (473)
..++-++|.++. ..+|+.|.-. -.+....++....+-++|=+...... ..+.....-...+++++... .
T Consensus 33 A~~lg~~la~~g---~~lv~GGG~~----GlM~a~~~ga~~~GG~viGv~p~~l~--~~e~~~~~~~~~i~~~~~~~Rk~ 103 (189)
T 3sbx_A 33 AGAVGAAIAARG---WTLVWGGGHV----SAMGAVSSAARAHGGWTVGVIPKMLV--HRELADHDADELVVTETMWERKQ 103 (189)
T ss_dssp HHHHHHHHHHTT---CEEEECCBCS----HHHHHHHHHHHTTTCCEEEEEETTTT--TTTTBCTTCSEEEEESSHHHHHH
T ss_pred HHHHHHHHHHCC---CEEEECCCcc----CHHHHHHHHHHHcCCcEEEEcCchhh--hcccCCCCCCeeEEcCCHHHHHH
Confidence 345556665542 4555554321 23444555555666666666543210 00111111123444565553 3
Q ss_pred HhhccCCcceeEeccCcchHHHHH---------hhCCcEEeccc
Q 047833 344 EILSHRSVSVFLSHCGWNSVLEAL---------SHGVPIIGWPL 378 (473)
Q Consensus 344 ~ll~~~~v~~~I~HGG~gt~~eal---------~~GvP~l~~P~ 378 (473)
.++.+++. .++--||.||.-|.. .+++|++++-.
T Consensus 104 ~m~~~sda-~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln~ 146 (189)
T 3sbx_A 104 VMEDRANA-FITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLDP 146 (189)
T ss_dssp HHHHHCSE-EEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECT
T ss_pred HHHHHCCE-EEEeCCCcchHHHHHHHHHHHHhcccCCCEEEecC
Confidence 34445554 567788999998874 36899998843
No 128
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=48.57 E-value=43 Score=32.19 Aligned_cols=34 Identities=12% Similarity=0.031 Sum_probs=24.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
+.||+++.. |. -.+++++++++ .|++|+++....
T Consensus 6 ~~kiLI~g~---g~--~a~~i~~aa~~-~G~~~v~v~~~~ 39 (446)
T 3ouz_A 6 IKSILIANR---GE--IALRALRTIKE-MGKKAICVYSEA 39 (446)
T ss_dssp CCEEEECCC---HH--HHHHHHHHHHH-TTCEEEEEEEGG
T ss_pred cceEEEECC---CH--HHHHHHHHHHH-cCCEEEEEEcCc
Confidence 457877543 32 45789999999 999999886443
No 129
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=48.36 E-value=1.1e+02 Score=25.45 Aligned_cols=98 Identities=15% Similarity=0.075 Sum_probs=55.9
Q ss_pred chhhHhhhhcCCCCCeEEEEeeCCcccCCHHHHHHHHHHHHhCCCceEEEECCCCCCCccccccccCCcEEEe--cccC-
Q 047833 265 STELCKKWLDTKPYTSVLYVSFGSQNTIATSQMMQLAMALEASGKNFIWVVRPPIGFDINSEIKCSGQGLVVH--KWAP- 341 (473)
Q Consensus 265 ~~~~~~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~--~~vp- 341 (473)
...++-.+|.+. +...||.|... ......++....+-++|-+++... .. ... ..+.+. ...+
T Consensus 46 ~A~~lg~~LA~~---G~~vVsGg~~G-----iM~aa~~gAl~~GG~~iGVlP~e~--~~---~~~--~~~~~~~~~~f~~ 110 (195)
T 1rcu_A 46 ICLELGRTLAKK---GYLVFNGGRDG-----VMELVSQGVREAGGTVVGILPDEE--AG---NPY--LSVAVKTGLDFQM 110 (195)
T ss_dssp HHHHHHHHHHHT---TCEEEECCSSH-----HHHHHHHHHHHTTCCEEEEESTTC--CC---CTT--CSEEEECCCCHHH
T ss_pred HHHHHHHHHHHC---CCEEEeCCHHH-----HHHHHHHHHHHcCCcEEEEeCCcc--cC---CCC--cceeeecCCCHHH
Confidence 445666677654 24556644333 344455555566667887775421 11 111 223332 2344
Q ss_pred h-HHhhccCCcceeEeccCcchHHH---HHhhCCcEEeccc
Q 047833 342 Q-VEILSHRSVSVFLSHCGWNSVLE---ALSHGVPIIGWPL 378 (473)
Q Consensus 342 ~-~~ll~~~~v~~~I~HGG~gt~~e---al~~GvP~l~~P~ 378 (473)
- .-+...++. .++--||.||+-| ++.+++|+++++.
T Consensus 111 Rk~~m~~~sda-~IvlpGG~GTL~E~~eal~~~kPV~lln~ 150 (195)
T 1rcu_A 111 RSFVLLRNADV-VVSIGGEIGTAIEILGAYALGKPVILLRG 150 (195)
T ss_dssp HHHHHHTTCSE-EEEESCCHHHHHHHHHHHHTTCCEEEETT
T ss_pred HHHHHHHhCCE-EEEecCCCcHHHHHHHHHhcCCCEEEECC
Confidence 2 333445554 6788899997764 6779999999974
No 130
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=47.94 E-value=11 Score=29.47 Aligned_cols=35 Identities=9% Similarity=-0.006 Sum_probs=25.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 4 RKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 4 ~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
+|.+|+++..| .+ -..+|+.|.+ +||+|+++....
T Consensus 5 ~~~~v~I~G~G---~i--G~~la~~L~~-~g~~V~~id~~~ 39 (141)
T 3llv_A 5 GRYEYIVIGSE---AA--GVGLVRELTA-AGKKVLAVDKSK 39 (141)
T ss_dssp -CCSEEEECCS---HH--HHHHHHHHHH-TTCCEEEEESCH
T ss_pred CCCEEEEECCC---HH--HHHHHHHHHH-CCCeEEEEECCH
Confidence 35678888654 32 3578999999 999999987544
No 131
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=47.18 E-value=21 Score=26.69 Aligned_cols=42 Identities=14% Similarity=0.088 Sum_probs=28.9
Q ss_pred EEE-EEcCC--CccCHHHHHHHHHHHHhCC-Cc-EEEEEcCCcchhhh
Q 047833 7 TIV-LFPFM--AQGHIIPFLALALHLEKTN-KY-TITFVNTPLNLRKL 49 (473)
Q Consensus 7 ~il-~~~~~--~~GH~~p~l~La~~L~~~r-Gh-~Vt~~~~~~~~~~v 49 (473)
|++ +++.+ +.......+.+|..+.+ . || +|+++-...-....
T Consensus 3 k~~ii~~~~p~~~~~~~~al~~a~~~~~-~~g~~~v~vff~~dgV~~~ 49 (117)
T 1jx7_A 3 KIVIVANGAPYGSESLFNSLRLAIALRE-QESNLDLRLFLMSDAVTAG 49 (117)
T ss_dssp EEEEEECCCTTTCSHHHHHHHHHHHHHH-HCTTCEEEEEECGGGGGGG
T ss_pred EEEEEEcCCCCCcHHHHHHHHHHHHHHh-cCCCccEEEEEEchHHHHH
Confidence 454 44444 33456678999999999 8 99 99988766654433
No 132
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=47.11 E-value=62 Score=29.31 Aligned_cols=33 Identities=18% Similarity=0.051 Sum_probs=22.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 6 ETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 6 ~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
+||+|+..+. ......++|.+ +||+|..+.+.+
T Consensus 1 mrivf~gt~~-----fa~~~L~~L~~-~~~~i~~Vvt~~ 33 (305)
T 2bln_A 1 MKTVVFAYHD-----MGCLGIEALLA-AGYEISAIFTHT 33 (305)
T ss_dssp CEEEEEECHH-----HHHHHHHHHHH-TTCEEEEEECCC
T ss_pred CEEEEEEcCH-----HHHHHHHHHHH-CCCcEEEEEcCC
Confidence 3788776532 22455678889 999998776654
No 133
>3e35_A Uncharacterized protein SCO1997; alpha/beta/alpha structure, actinobacteria-specific protein, conserved protein, unknown function; 2.20A {Streptomyces coelicolor}
Probab=47.03 E-value=66 Score=29.42 Aligned_cols=151 Identities=11% Similarity=0.100 Sum_probs=74.8
Q ss_pred CCeEEEEeeCCcccCCH-HHHHHHHHHHHhCCCceEEEECCCCCCCccccccccCCcEEEecccChHHhhccCCcceeE-
Q 047833 278 YTSVLYVSFGSQNTIAT-SQMMQLAMALEASGKNFIWVVRPPIGFDINSEIKCSGQGLVVHKWAPQVEILSHRSVSVFL- 355 (473)
Q Consensus 278 ~~~~V~vs~GS~~~~~~-~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~v~~~I- 355 (473)
++++++++ |-...... ++...+++.+++.+.+-|+.++.- +.+...+.|-.|..... ..+++..-.. .+-
T Consensus 104 ~~~~llL~-G~eP~~~w~~f~~avl~~a~~~gV~~vv~Lggi----p~~vpHtRP~~V~~~at--~~el~~~~~~-~~~~ 175 (325)
T 3e35_A 104 GAPFLFLS-GPEPDVEWERFAAAVGQIVERLGVRLSVSFHGI----PMGVPHTRPVGITPHGS--RTDLVPGHRS-PFEE 175 (325)
T ss_dssp CCEEEEEE-EECCSSCHHHHHHHHHHHHHHTTEEEEEEEEEE----EESCCTTSCCCEEEEES--CGGGCC------CCC
T ss_pred CCcEEEEE-CCCCcchHHHHHHHHHHHHHHcCCCEEEEEeCc----cCCCCCCCCceeEEEeC--CHHHHHhhcc-cccc
Confidence 35566555 54444554 677788898999999888887521 11111223333433222 1222222111 011
Q ss_pred --eccCcchH--HHHHhhCCcEEec----cccccc---hhhHHH----HHHhhcceEE--EecCCCCccCHHHHHHHHHH
Q 047833 356 --SHCGWNSV--LEALSHGVPIIGW----PLAAEQ---FYNSKL----LEEEIGVCVE--VARGKSSEVLKKDIAAKIEL 418 (473)
Q Consensus 356 --~HGG~gt~--~eal~~GvP~l~~----P~~~DQ---~~nA~~----v~~~lG~g~~--l~~~~~~~~~~~~l~~~i~~ 418 (473)
.-+|..++ .+|...|.|.+++ |...-| |.=|.. +.+.+|+-+- +.. -.-.++++.+.|.+
T Consensus 176 ~~gp~Gi~glL~~~~~~~Gi~a~~l~~~vPhYla~~p~P~AA~alL~~L~~~~gl~vp~~~~~---L~e~Ae~~e~~i~e 252 (325)
T 3e35_A 176 AQVPGSAEALVEYRLAQAGHDVLGVAAHVPHYVARSAYPDAALTVLEAITAATGLVLPGIAHS---LRTDAHRTQTEIDR 252 (325)
T ss_dssp CCCCCCHHHHHHHHHHHTTCCEEEEEEEEEGGGTTSCCHHHHHHHHHHHHHHHCCCCHHHHHH---HHHHHHHHHHHHHH
T ss_pred CCCcccHHHHHHHHHHHCCCCeEEEEEEcCccccCCCCHHHHHHHHHHHHHHhCCCCCcchHH---HHHHHHHHHHHHHH
Confidence 12333333 4678899998764 443333 333333 3333344333 222 33344667778877
Q ss_pred HHcC-ChhhHHHHHHHHHHHHH
Q 047833 419 VMNE-TEKGIELRKNAYEVREI 439 (473)
Q Consensus 419 ll~~-~~~~~~~~~~a~~l~~~ 439 (473)
+.++ ..+..+|-+..++=.+.
T Consensus 253 l~~~~~~E~~~~V~~LE~~yD~ 274 (325)
T 3e35_A 253 QIQEGDEELIALVQGLEHQYDA 274 (325)
T ss_dssp HHHHSCHHHHHHHHHHHHHHHH
T ss_pred HHhccCHHHHHHHHHHHHHHhh
Confidence 7775 43444555555444333
No 134
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=47.01 E-value=31 Score=33.55 Aligned_cols=49 Identities=14% Similarity=0.112 Sum_probs=35.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhccCCCCCCceEEecC
Q 047833 6 ETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLRKLKSSVPQNSSINLLEIP 65 (473)
Q Consensus 6 ~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~ 65 (473)
+|-+|++. .|=.-++.+|+.|.+ .|+++. ++......++. .|+.+..+.
T Consensus 10 i~~aLISV---sDK~glvelAk~L~~-lGfeI~--ATgGTak~L~e-----~GI~v~~V~ 58 (523)
T 3zzm_A 10 IRRALISV---YDKTGLVDLAQGLSA-AGVEII--STGSTAKTIAD-----TGIPVTPVE 58 (523)
T ss_dssp CCEEEEEE---SSCTTHHHHHHHHHH-TTCEEE--ECHHHHHHHHT-----TTCCCEEHH
T ss_pred ccEEEEEE---eccccHHHHHHHHHH-CCCEEE--EcchHHHHHHH-----cCCceeecc
Confidence 34444444 345568899999999 999886 46777778888 666776665
No 135
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=46.79 E-value=28 Score=27.58 Aligned_cols=47 Identities=17% Similarity=0.246 Sum_probs=34.6
Q ss_pred cEEE-EEcCCCccCHHH-HHHHHHHHHhCCCcEEEEEcCCcchhhhhccC
Q 047833 6 ETIV-LFPFMAQGHIIP-FLALALHLEKTNKYTITFVNTPLNLRKLKSSV 53 (473)
Q Consensus 6 ~~il-~~~~~~~GH~~p-~l~La~~L~~~rGh~Vt~~~~~~~~~~v~~~~ 53 (473)
+|++ ++..|-.-=..| .+-++..|++ +||+|++++++.....++.+.
T Consensus 7 m~~LilLGCPE~Pvq~p~~lYl~~~Lk~-~G~~v~VA~npAAlkLlevaD 55 (157)
T 1kjn_A 7 GKALMVLGCPESPVQIPLAIYTSHKLKK-KGFRVTVTANPAALRLVQVAD 55 (157)
T ss_dssp CEEEEECCCSCSTTHHHHHHHHHHHHHH-TTCEEEEEECHHHHHHHHHHS
T ss_pred eeeeEEecCCCCcchhhHHHHHHHHHHh-cCCeeEEecCHHHHhheeccC
Confidence 4554 444454444444 6788999999 999999999999888877643
No 136
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=45.92 E-value=17 Score=29.31 Aligned_cols=35 Identities=11% Similarity=0.082 Sum_probs=29.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 6 ETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 6 ~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
.++++++.|+. +.|++.+++.|.+ +|.+|+++ ...
T Consensus 24 ~~~llIaGG~G--ItPl~sm~~~l~~-~~~~v~l~-g~r 58 (158)
T 3lrx_A 24 GKILAIGAYTG--IVEVYPIAKAWQE-IGNDVTTL-HVT 58 (158)
T ss_dssp SEEEEEEETTH--HHHHHHHHHHHHH-HTCEEEEE-EEC
T ss_pred CeEEEEEccCc--HHHHHHHHHHHHh-cCCcEEEE-EeC
Confidence 47888887653 9999999999999 99999998 444
No 137
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=45.80 E-value=1.5e+02 Score=29.11 Aligned_cols=34 Identities=21% Similarity=0.300 Sum_probs=27.4
Q ss_pred HHHHHHHhHhhhcCCCCccEEEECCCcchHHHHHHHh-------CCceEEE
Q 047833 101 HFKKLVNDLIDEQNGYKPLCIITDMFFGWCKEIAQEY-------GIFHAIF 144 (473)
Q Consensus 101 ~~~~~l~~~~~~~~~~~pD~Vv~d~~~~~~~~~A~~~-------giP~v~~ 144 (473)
.+.+++++. +||++|.+.. +..+|+++ |||++.+
T Consensus 425 ~l~~~i~~~-------~pDLiig~~~---~~~~a~~~~~~g~~~gip~v~i 465 (519)
T 1qgu_B 425 HFRSLMFTR-------QPDFMIGNSY---GKFIQRDTLAKGKAFEVPLIRL 465 (519)
T ss_dssp HHHHHHHHH-------CCSEEEECGG---GHHHHHHHHHHCGGGCCCEEEC
T ss_pred HHHHHHhhc-------CCCEEEECcc---hHHHHHHhhcccccCCCCeEEe
Confidence 446777787 8999999964 57778888 9999886
No 138
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=45.56 E-value=20 Score=30.17 Aligned_cols=69 Identities=16% Similarity=0.206 Sum_probs=43.3
Q ss_pred CCcceeEeccCcchHHHHHhhCCcEEeccccc-c----------------------chhhHHHHHHhhcceEEEecCCCC
Q 047833 349 RSVSVFLSHCGWNSVLEALSHGVPIIGWPLAA-E----------------------QFYNSKLLEEEIGVCVEVARGKSS 405 (473)
Q Consensus 349 ~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~-D----------------------Q~~nA~~v~~~lG~g~~l~~~~~~ 405 (473)
..++.+|+.||........ .++|+|-+|..+ | ....+..+.+.||+-+....
T Consensus 50 ~~~dVIISRGgta~~lr~~-~~iPVV~I~~s~~Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~~~i~~~~---- 124 (196)
T 2q5c_A 50 DEVDAIISRGATSDYIKKS-VSIPSISIKVTRFDTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLGVKIKEFL---- 124 (196)
T ss_dssp TTCSEEEEEHHHHHHHHTT-CSSCEEEECCCHHHHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHTCEEEEEE----
T ss_pred CCCeEEEECChHHHHHHHh-CCCCEEEEcCCHhHHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhCCceEEEE----
Confidence 4455799999999888875 579999999743 2 23334445555555444432
Q ss_pred ccCHHHHHHHHHHHHcC
Q 047833 406 EVLKKDIAAKIELVMNE 422 (473)
Q Consensus 406 ~~~~~~l~~~i~~ll~~ 422 (473)
--+++++.+.|.++..+
T Consensus 125 ~~~~~e~~~~i~~l~~~ 141 (196)
T 2q5c_A 125 FSSEDEITTLISKVKTE 141 (196)
T ss_dssp ECSGGGHHHHHHHHHHT
T ss_pred eCCHHHHHHHHHHHHHC
Confidence 33445666666666543
No 139
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=45.44 E-value=39 Score=32.39 Aligned_cols=25 Identities=16% Similarity=0.190 Sum_probs=19.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCc
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLEKTNKY 35 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~~~rGh 35 (473)
|+|||++..+++-| +||+.|.+ .++
T Consensus 3 ~mkvlviG~ggre~-----ala~~l~~-s~~ 27 (431)
T 3mjf_A 3 AMNILIIGNGGREH-----ALGWKAAQ-SPL 27 (431)
T ss_dssp CEEEEEEECSHHHH-----HHHHHHTT-CTT
T ss_pred CcEEEEECCCHHHH-----HHHHHHHh-CCC
Confidence 67999998875544 68999998 654
No 140
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=45.41 E-value=13 Score=33.87 Aligned_cols=36 Identities=8% Similarity=-0.042 Sum_probs=29.3
Q ss_pred EEEEcCCCccCHH--------------HHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 8 IVLFPFMAQGHII--------------PFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 8 il~~~~~~~GH~~--------------p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
|++.++|++=.+- .-.++|+++.+ +|++|++++.+.
T Consensus 40 VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~-~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 40 VLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLA-AGYGVLFLYRAR 89 (313)
T ss_dssp EEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHH-TTCEEEEEEETT
T ss_pred EEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHH-CCCEEEEEecCC
Confidence 7788888866662 56689999999 999999998654
No 141
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=45.06 E-value=17 Score=31.90 Aligned_cols=43 Identities=16% Similarity=0.109 Sum_probs=31.2
Q ss_pred CCCCCcEEEEEc--CCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 1 MAQRKETIVLFP--FMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 1 ~~~~~~~il~~~--~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
|++++++++.+. -|+.|-..-...||..|.+ +|++|.++=...
T Consensus 1 m~~~~~~vI~v~s~kGGvGKTt~a~~LA~~la~-~g~~VlliD~D~ 45 (257)
T 1wcv_1 1 MLRAKVRRIALANQKGGVGKTTTAINLAAYLAR-LGKRVLLVDLDP 45 (257)
T ss_dssp ----CCCEEEECCSSCCHHHHHHHHHHHHHHHH-TTCCEEEEECCT
T ss_pred CCCCCCEEEEEEeCCCCchHHHHHHHHHHHHHH-CCCCEEEEECCC
Confidence 666666665443 3677888999999999999 999999986554
No 142
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=44.77 E-value=15 Score=33.36 Aligned_cols=37 Identities=11% Similarity=0.032 Sum_probs=28.9
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 047833 1 MAQRKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTP 43 (473)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~ 43 (473)
|..++.+|.|+-.|..|+ .+|..|.+ +||+|+++...
T Consensus 11 ~~~~~~~I~VIG~G~mG~-----~iA~~la~-~G~~V~~~d~~ 47 (302)
T 1f0y_A 11 KKIIVKHVTVIGGGLMGA-----GIAQVAAA-TGHTVVLVDQT 47 (302)
T ss_dssp -CCCCCEEEEECCSHHHH-----HHHHHHHH-TTCEEEEECSC
T ss_pred ccccCCEEEEECCCHHHH-----HHHHHHHh-CCCeEEEEECC
Confidence 444567899998887775 58889999 99999988644
No 143
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=44.63 E-value=61 Score=27.83 Aligned_cols=22 Identities=9% Similarity=0.323 Sum_probs=17.1
Q ss_pred hhhHHHHHHHHhHhhhcCCCCccEEEECC
Q 047833 97 SFKPHFKKLVNDLIDEQNGYKPLCIITDM 125 (473)
Q Consensus 97 ~~~~~~~~~l~~~~~~~~~~~pD~Vv~d~ 125 (473)
.....+.+++++. +||+|++..
T Consensus 82 ~~~~~l~~~ir~~-------~P~~V~t~~ 103 (227)
T 1uan_A 82 EQRLKLAQALRRL-------RPRVVFAPL 103 (227)
T ss_dssp HHHHHHHHHHHHH-------CEEEEEEEC
T ss_pred HHHHHHHHHHHHh-------CCCEEEeCC
Confidence 3456778889999 999999853
No 144
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=44.62 E-value=27 Score=31.76 Aligned_cols=46 Identities=11% Similarity=0.132 Sum_probs=35.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhccCCCCCCceEEe
Q 047833 6 ETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLRKLKSSVPQNSSINLLE 63 (473)
Q Consensus 6 ~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~ 63 (473)
+||+++..|+.|- .+|..|.+ .||+|+++.... .+.+.+ .++.+..
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~-~g~~V~~~~r~~-~~~i~~-----~g~~~~~ 48 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQR-SGEDVHFLLRRD-YEAIAG-----NGLKVFS 48 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHH-TSCCEEEECSTT-HHHHHH-----TCEEEEE
T ss_pred CEEEEECcCHHHH-----HHHHHHHH-CCCeEEEEEcCc-HHHHHh-----CCCEEEc
Confidence 5899998888884 46889999 999999998765 466666 5666554
No 145
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=44.59 E-value=42 Score=26.10 Aligned_cols=39 Identities=5% Similarity=-0.026 Sum_probs=26.7
Q ss_pred HHHHHhHhhhcCCCCccEEEECCCcc--hHHHHHHHh-------CCceEEEecch
Q 047833 103 KKLVNDLIDEQNGYKPLCIITDMFFG--WCKEIAQEY-------GIFHAIFIGGG 148 (473)
Q Consensus 103 ~~~l~~~~~~~~~~~pD~Vv~d~~~~--~~~~~A~~~-------giP~v~~~~~~ 148 (473)
.+.+++. .||+||.|...+ .|.-+++.+ .+|.|.++...
T Consensus 50 l~~~~~~-------~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 50 LPMLKKG-------DFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp HHHHHHH-------CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred HHHHHhC-------CCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC
Confidence 4455666 899999998777 455555443 58888876543
No 146
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=44.41 E-value=93 Score=28.08 Aligned_cols=97 Identities=10% Similarity=0.060 Sum_probs=54.2
Q ss_pred cEEEEEcCCCcc--C--HHHHHHHHHHHHhCCCcEEEEE-cCCcchhhhhccCCCCCCceEEecCCCCCCCCCCCCCCCC
Q 047833 6 ETIVLFPFMAQG--H--IIPFLALALHLEKTNKYTITFV-NTPLNLRKLKSSVPQNSSINLLEIPFDSIDHNLPPCTENT 80 (473)
Q Consensus 6 ~~il~~~~~~~G--H--~~p~l~La~~L~~~rGh~Vt~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 80 (473)
..|++.|+.+.. . ..-+..|++.|.+ +|++|.+. +++...+..+........+ .+-
T Consensus 179 ~~i~l~pga~~~~k~wp~~~~~~l~~~L~~-~~~~vvl~~g~~~e~~~~~~i~~~~~~~---~l~--------------- 239 (326)
T 2gt1_A 179 EYAVFLHATTRDDKHWPEEHWRELIGLLAD-SGIRIKLPWGAPHEEERAKRLAEGFAYV---EVL--------------- 239 (326)
T ss_dssp SEEEEECCCSSGGGSCCHHHHHHHHHHTTT-TCCEEEECCSSHHHHHHHHHHHTTCTTE---EEC---------------
T ss_pred CEEEEEeCCCCccccCCHHHHHHHHHHHHH-CCCcEEEecCCHHHHHHHHHHHhhCCcc---ccc---------------
Confidence 456677655421 1 2358899999999 99999886 4444333332211000010 000
Q ss_pred CCCChhhHHHHHHHHHhhhHHHHHHHHhHhhhcCCCCccEEEECCCcchHHHHHHHhCCceEEEec
Q 047833 81 DSVPYHLVSKLIEATLSFKPHFKKLVNDLIDEQNGYKPLCIITDMFFGWCKEIAQEYGIFHAIFIG 146 (473)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~~~~~~A~~~giP~v~~~~ 146 (473)
... ...++..++.. .|++|+... +.+.+|..+|+|+|.++.
T Consensus 240 g~~--------------sl~el~ali~~---------a~l~I~~DS--G~~HlAaa~g~P~v~lfg 280 (326)
T 2gt1_A 240 PKM--------------SLEGVARVLAG---------AKFVVSVDT--GLSHLTAALDRPNITVYG 280 (326)
T ss_dssp CCC--------------CHHHHHHHHHT---------CSEEEEESS--HHHHHHHHTTCCEEEEES
T ss_pred CCC--------------CHHHHHHHHHh---------CCEEEecCC--cHHHHHHHcCCCEEEEEC
Confidence 000 11222344444 499998854 357788889999999864
No 147
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=43.78 E-value=32 Score=29.71 Aligned_cols=39 Identities=10% Similarity=-0.030 Sum_probs=35.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
+.+|++..-|+.|-.+-++.+|..|.+ +|++|.++....
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~-~G~~V~v~d~D~ 44 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLR-QGVRVMAGVVET 44 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHH-TTCCEEEEECCC
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHH-CCCCEEEEEeCC
Confidence 568888888999999999999999999 999998887655
No 148
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=43.40 E-value=15 Score=31.88 Aligned_cols=37 Identities=16% Similarity=0.189 Sum_probs=30.1
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 047833 1 MAQRKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTP 43 (473)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~ 43 (473)
|.+.++||.|+..|..|- .||..|++ +||+|+.+...
T Consensus 2 ~~~~~mkI~IIG~G~~G~-----sLA~~L~~-~G~~V~~~~~~ 38 (232)
T 3dfu_A 2 MQAPRLRVGIFDDGSSTV-----NMAEKLDS-VGHYVTVLHAP 38 (232)
T ss_dssp -CCCCCEEEEECCSCCCS-----CHHHHHHH-TTCEEEECSSG
T ss_pred CCCCCcEEEEEeeCHHHH-----HHHHHHHH-CCCEEEEecCH
Confidence 556678999999998874 58999999 99999987653
No 149
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=43.37 E-value=43 Score=32.30 Aligned_cols=41 Identities=10% Similarity=0.115 Sum_probs=35.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhh
Q 047833 7 TIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLRK 48 (473)
Q Consensus 7 ~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~ 48 (473)
-+++...|+.|-..-.+.+|..... +|..|.|++.+...+.
T Consensus 199 liiIaG~pG~GKTtlal~ia~~~a~-~g~~vl~fSlEms~~q 239 (444)
T 3bgw_A 199 FVLIAARPSMGKTAFALKQAKNMSD-NDDVVNLHSLEMGKKE 239 (444)
T ss_dssp EEEEEECSSSSHHHHHHHHHHHHHH-TTCEEEEECSSSCTTH
T ss_pred EEEEEeCCCCChHHHHHHHHHHHHH-cCCEEEEEECCCCHHH
Confidence 4567788999999999999999999 9999999998875543
No 150
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=42.56 E-value=18 Score=37.49 Aligned_cols=118 Identities=5% Similarity=-0.013 Sum_probs=79.3
Q ss_pred EecccChHHhhccCCcceeEeccCcchHHHHHhhCCcEEeccccccchhhHHHHHHhhcceEEEec--CCCCccCHHHHH
Q 047833 336 VHKWAPQVEILSHRSVSVFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEEIGVCVEVAR--GKSSEVLKKDIA 413 (473)
Q Consensus 336 ~~~~vp~~~ll~~~~v~~~I~HGG~gt~~eal~~GvP~l~~P~~~DQ~~nA~~v~~~lG~g~~l~~--~~~~~~~~~~l~ 413 (473)
+.++.+-.++|..++ ++||= =...+.|.+..++|+|......|++..- .+ |.=..... -...-.+.++|.
T Consensus 603 ~~~~~di~~ll~~aD--~lITD-ySSv~fD~~~l~kPiif~~~D~~~Y~~~----~r-g~y~d~~~~~pg~~~~~~~eL~ 674 (729)
T 3l7i_A 603 VSNYNDVSELFLISD--CLITD-YSSVMFDYGILKRPQFFFAYDIDKYDKG----LR-GFYMNYMEDLPGPIYTEPYGLA 674 (729)
T ss_dssp CTTCSCHHHHHHTCS--EEEES-SCTHHHHHGGGCCCEEEECTTTTTTTSS----CC-SBSSCTTSSSSSCEESSHHHHH
T ss_pred CCCCcCHHHHHHHhC--EEEee-chHHHHhHHhhCCCEEEecCCHHHHhhc----cC-CcccChhHhCCCCeECCHHHHH
Confidence 445667788888877 48887 3457789999999999988766665431 12 32111100 001245678999
Q ss_pred HHHHHHHcCChhhHHHHHHHHHHHHHHHHhcccccccCCcHHHHHHHHHHHHHhhh
Q 047833 414 AKIELVMNETEKGIELRKNAYEVREIIKNAFKNEENFQGSSVKAMNQFLNAASMVK 469 (473)
Q Consensus 414 ~~i~~ll~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 469 (473)
++|.....+. +.|+++.+++.+++-.. .+|.++.+.++.+.+....-.
T Consensus 675 ~~i~~~~~~~---~~~~~~~~~~~~~~~~~-----~dg~as~ri~~~i~~~~~~~~ 722 (729)
T 3l7i_A 675 KELKNLDKVQ---QQYQEKIDAFYDRFCSV-----DNGKASQYIGDLIHKDIKEQL 722 (729)
T ss_dssp HHHTTHHHHH---HHTHHHHHHHHHHHSTT-----CCSCHHHHHHHHHHHHHHHHC
T ss_pred HHHhhhhccc---hhHHHHHHHHHHHhCCc-----cCChHHHHHHHHHHhcCcCcc
Confidence 9998877532 15888888888887544 778888999888888665433
No 151
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=42.43 E-value=1.7e+02 Score=25.55 Aligned_cols=32 Identities=13% Similarity=-0.134 Sum_probs=22.3
Q ss_pred CccEEEEC-CCcc-hHHHHHHHhCCceEEEecch
Q 047833 117 KPLCIITD-MFFG-WCKEIAQEYGIFHAIFIGGG 148 (473)
Q Consensus 117 ~pD~Vv~d-~~~~-~~~~~A~~~giP~v~~~~~~ 148 (473)
.||+||.- +..- .+..=|.++|||+|.+.-+.
T Consensus 158 ~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn 191 (256)
T 2vqe_B 158 LPDAIFVVDPTKEAIAVREARKLFIPVIALADTD 191 (256)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTT
T ss_pred CCCEEEEeCCccchHHHHHHHHcCCCEEEEecCC
Confidence 68886654 4322 45677888999999986543
No 152
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=42.41 E-value=37 Score=29.70 Aligned_cols=39 Identities=15% Similarity=0.226 Sum_probs=27.9
Q ss_pred CcEEEEEcCCCcc-----------CHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 5 KETIVLFPFMAQG-----------HIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 5 ~~~il~~~~~~~G-----------H~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
|+||+++.....+ ...=++.....|++ .|++|+++++..
T Consensus 3 m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~-aG~~V~iaS~~g 52 (244)
T 3kkl_A 3 PKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEK-HGFEVDFVSETG 52 (244)
T ss_dssp CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHT-TTCEEEEEESSS
T ss_pred CCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHH-CCCEEEEEeCCC
Confidence 5588876664322 22457778889999 999999998643
No 153
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=41.39 E-value=32 Score=29.19 Aligned_cols=47 Identities=13% Similarity=0.007 Sum_probs=34.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhc
Q 047833 4 RKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLRKLKS 51 (473)
Q Consensus 4 ~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v~~ 51 (473)
++.||++...|+.+=+. ...+.+.|++.+|++|.++.++...+.+..
T Consensus 18 ~~k~IllgvTGsiaa~k-~~~lv~~L~~~~g~~V~vv~T~~A~~fi~~ 64 (206)
T 1qzu_A 18 RKFHVLVGVTGSVAALK-LPLLVSKLLDIPGLEVAVVTTERAKHFYSP 64 (206)
T ss_dssp SSEEEEEEECSSGGGGT-HHHHHHHHC---CEEEEEEECTGGGGSSCG
T ss_pred CCCEEEEEEeChHHHHH-HHHHHHHHhcccCCEEEEEECHhHHHHhCH
Confidence 45689888888877554 589999997624999999999887766655
No 154
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=41.15 E-value=77 Score=24.52 Aligned_cols=49 Identities=8% Similarity=0.043 Sum_probs=34.2
Q ss_pred hCCcEEeccccccchhhHHHHHHhhcceEEEecCCCCccCHHHHHHHHHHHHcCC
Q 047833 369 HGVPIIGWPLAAEQFYNSKLLEEEIGVCVEVARGKSSEVLKKDIAAKIELVMNET 423 (473)
Q Consensus 369 ~GvP~l~~P~~~DQ~~nA~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~~~ 423 (473)
..+|+|++--..+ ........+. |+--.+.+ .++.++|..+|++++...
T Consensus 74 ~~~pii~ls~~~~-~~~~~~~~~~-g~~~~l~k----P~~~~~L~~~i~~~~~~~ 122 (155)
T 1qkk_A 74 PDLPMILVTGHGD-IPMAVQAIQD-GAYDFIAK----PFAADRLVQSARRAEEKR 122 (155)
T ss_dssp TTSCEEEEECGGG-HHHHHHHHHT-TCCEEEES----SCCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC-hHHHHHHHhc-CCCeEEeC----CCCHHHHHHHHHHHHHHH
Confidence 4788888865444 3344444446 77666665 689999999999998755
No 155
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=41.11 E-value=94 Score=26.62 Aligned_cols=151 Identities=17% Similarity=0.120 Sum_probs=77.6
Q ss_pred hcCCCCCeEEEEeeCCcccCCHHHHHHHHHHHHhCCCceEEEECCCCCCCccccccccCCcEEEecccChHHhhccCCcc
Q 047833 273 LDTKPYTSVLYVSFGSQNTIATSQMMQLAMALEASGKNFIWVVRPPIGFDINSEIKCSGQGLVVHKWAPQVEILSHRSVS 352 (473)
Q Consensus 273 l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~v~ 352 (473)
++-. +++++.|..|.++ ...+..|.+.|.++.++.... .++-.......++......-+...|..++
T Consensus 27 l~L~-gk~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~~---~~~l~~l~~~~~i~~i~~~~~~~dL~~ad-- 93 (223)
T 3dfz_A 27 LDLK-GRSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPTV---SAEINEWEAKGQLRVKRKKVGEEDLLNVF-- 93 (223)
T ss_dssp ECCT-TCCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSSC---CHHHHHHHHTTSCEEECSCCCGGGSSSCS--
T ss_pred EEcC-CCEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCCC---CHHHHHHHHcCCcEEEECCCCHhHhCCCC--
Confidence 4433 4668888777443 334566777788888776422 11111111122333322222334455655
Q ss_pred eeEeccCcchHHHHHh----hCCcEEeccccccchhhHH-----HHHHhhcceEEEecCCCCccCHHHHHHHHHHHHcCC
Q 047833 353 VFLSHCGWNSVLEALS----HGVPIIGWPLAAEQFYNSK-----LLEEEIGVCVEVARGKSSEVLKKDIAAKIELVMNET 423 (473)
Q Consensus 353 ~~I~HGG~gt~~eal~----~GvP~l~~P~~~DQ~~nA~-----~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~~~ 423 (473)
++|.--|.-.+.+.++ .|+|+-+ .|.|..+. .+.+- ++-+.+..+...-.-+..|++.|++++...
T Consensus 94 LVIaAT~d~~~N~~I~~~ak~gi~VNv----vD~p~~~~f~~Paiv~rg-~l~iaIST~G~sP~la~~iR~~ie~~lp~~ 168 (223)
T 3dfz_A 94 FIVVATNDQAVNKFVKQHIKNDQLVNM----ASSFSDGNIQIPAQFSRG-RLSLAISTDGASPLLTKRIKEDLSSNYDES 168 (223)
T ss_dssp EEEECCCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEEEET-TEEEEEECTTSCHHHHHHHHHHHHHHSCTH
T ss_pred EEEECCCCHHHHHHHHHHHhCCCEEEE----eCCcccCeEEEeeEEEeC-CEEEEEECCCCCcHHHHHHHHHHHHHccHH
Confidence 5777777766555544 4555433 35444442 22223 444555542222333466888888888543
Q ss_pred hhhHHHHHHHHHHHHHHHHh
Q 047833 424 EKGIELRKNAYEVREIIKNA 443 (473)
Q Consensus 424 ~~~~~~~~~a~~l~~~~~~~ 443 (473)
-..+-+.+.++++++++.
T Consensus 169 --~~~~~~~~~~~R~~vk~~ 186 (223)
T 3dfz_A 169 --YTQYTQFLYECRVLIHRL 186 (223)
T ss_dssp --HHHHHHHHHHHHHHHHHC
T ss_pred --HHHHHHHHHHHHHHHHHH
Confidence 235777777788777754
No 156
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=40.98 E-value=18 Score=35.64 Aligned_cols=35 Identities=11% Similarity=0.323 Sum_probs=28.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 4 RKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 4 ~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
+|+||+++-.|.-| +.+|+.|.+ .|++||++...+
T Consensus 41 ~KprVVIIGgG~AG-----l~~A~~L~~-~~~~VtLId~~~ 75 (502)
T 4g6h_A 41 DKPNVLILGSGWGA-----ISFLKHIDT-KKYNVSIISPRS 75 (502)
T ss_dssp SSCEEEEECSSHHH-----HHHHHHSCT-TTCEEEEEESSS
T ss_pred CCCCEEEECCcHHH-----HHHHHHhhh-CCCcEEEECCCC
Confidence 46799999877555 578999999 999999997654
No 157
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=40.75 E-value=21 Score=27.44 Aligned_cols=37 Identities=11% Similarity=-0.056 Sum_probs=24.1
Q ss_pred HHHHHHhHhhhcCCCCccEEEECCCcc--hHHHHHH---HhCCceEEEe
Q 047833 102 FKKLVNDLIDEQNGYKPLCIITDMFFG--WCKEIAQ---EYGIFHAIFI 145 (473)
Q Consensus 102 ~~~~l~~~~~~~~~~~pD~Vv~d~~~~--~~~~~A~---~~giP~v~~~ 145 (473)
..+++++. +||+||.|...+ .|..+++ ..++|.|.++
T Consensus 45 Al~~~~~~-------~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 45 ALDIARKG-------QFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp HHHHHHHC-------CSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred HHHHHHhC-------CCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 34455555 899999997776 3444443 3578877654
No 158
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=40.63 E-value=49 Score=20.12 Aligned_cols=42 Identities=26% Similarity=0.298 Sum_probs=27.4
Q ss_pred CccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhcccccccCC
Q 047833 405 SEVLKKDIAAKIELVMNETEKGIELRKNAYEVREIIKNAFKNEENFQG 452 (473)
Q Consensus 405 ~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~g 452 (473)
+..++.++..-=.++|. ++|+-..++++.+-+|+++|.+..|
T Consensus 2 ~~~~~~dle~~KqEIL~------E~RkElqK~K~EIIeAi~~El~~~~ 43 (45)
T 1use_A 2 SSSDYSDLQRVKQELLE------EVKKELQKVKEEIIEAFVQELRKRG 43 (45)
T ss_dssp -CCCHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCcHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34566666665566665 6888888888888877655544444
No 159
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=40.42 E-value=2e+02 Score=25.66 Aligned_cols=106 Identities=7% Similarity=0.074 Sum_probs=59.9
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC-CCcEEEEEcCCc---chhhhhccCCCCCCceEEecCCCCCCCCCCCCCC
Q 047833 3 QRKETIVLFPFMAQGHIIPFLALALHLEKT-NKYTITFVNTPL---NLRKLKSSVPQNSSINLLEIPFDSIDHNLPPCTE 78 (473)
Q Consensus 3 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~-rGh~Vt~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 78 (473)
.+|+||+++.++. || -+-+|..+.++- -..+|.++.... ..+..++ .++.+..+|.. ..
T Consensus 87 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~p~~~~~~A~~-----~gIp~~~~~~~------~~--- 149 (288)
T 3obi_A 87 ETRRKVMLLVSQS-DH--CLADILYRWRVGDLHMIPTAIVSNHPRETFSGFDF-----GDIPFYHFPVN------KD--- 149 (288)
T ss_dssp TSCEEEEEEECSC-CH--HHHHHHHHHHTTSSCEEEEEEEESSCGGGSCCTTT-----TTCCEEECCCC------TT---
T ss_pred CCCcEEEEEEcCC-CC--CHHHHHHHHHCCCCCeEEEEEEcCCChhHHHHHHH-----cCCCEEEeCCC------cc---
Confidence 3577898777765 44 334455554440 234666655332 2222222 77777776621 00
Q ss_pred CCCCCChhhHHHHHHHHHhhhHHHHHHHHhHhhhcCCCCccEEEECCCcc-hHHHHHHHhCCceEEEecc
Q 047833 79 NTDSVPYHLVSKLIEATLSFKPHFKKLVNDLIDEQNGYKPLCIITDMFFG-WCKEIAQEYGIFHAIFIGG 147 (473)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~-~~~~~A~~~giP~v~~~~~ 147 (473)
.. ....+.+.+++++. +||+||.-.+.. -...+-+...-.++.++++
T Consensus 150 -----~r----------~~~~~~~~~~l~~~-------~~Dlivlagy~~il~~~~l~~~~~~~iNiHpS 197 (288)
T 3obi_A 150 -----TR----------RQQEAAITALIAQT-------HTDLVVLARYMQILSDEMSARLAGRCINIHHS 197 (288)
T ss_dssp -----TH----------HHHHHHHHHHHHHH-------TCCEEEESSCCSCCCHHHHHHTTTSEEEEEEE
T ss_pred -----cH----------HHHHHHHHHHHHhc-------CCCEEEhhhhhhhCCHHHHhhhcCCeEEeCcc
Confidence 00 11234567888888 999999986643 3345556666667887664
No 160
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=40.15 E-value=21 Score=32.85 Aligned_cols=47 Identities=19% Similarity=0.167 Sum_probs=34.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhccCCCCCCceEE
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLRKLKSSVPQNSSINLL 62 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~ 62 (473)
++||+++..|+.| ..+|..|.+ .||+|+++......+.+.+ .++...
T Consensus 3 ~mkI~IiGaG~~G-----~~~a~~L~~-~g~~V~~~~r~~~~~~~~~-----~g~~~~ 49 (335)
T 3ghy_A 3 LTRICIVGAGAVG-----GYLGARLAL-AGEAINVLARGATLQALQT-----AGLRLT 49 (335)
T ss_dssp CCCEEEESCCHHH-----HHHHHHHHH-TTCCEEEECCHHHHHHHHH-----TCEEEE
T ss_pred CCEEEEECcCHHH-----HHHHHHHHH-CCCEEEEEEChHHHHHHHH-----CCCEEe
Confidence 4689999888777 457899999 9999999986544455555 455554
No 161
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B*
Probab=40.14 E-value=1.1e+02 Score=27.83 Aligned_cols=17 Identities=29% Similarity=0.118 Sum_probs=13.8
Q ss_pred CccCHHHHHHHHHHHHc
Q 047833 405 SEVLKKDIAAKIELVMN 421 (473)
Q Consensus 405 ~~~~~~~l~~~i~~ll~ 421 (473)
..++.+.|.++|+++++
T Consensus 307 ~gl~~~~I~~~i~~~l~ 323 (324)
T 1w85_B 307 WLPNFKDVIETAKKVMN 323 (324)
T ss_dssp HSCCHHHHHHHHHHHHT
T ss_pred hCcCHHHHHHHHHHHhh
Confidence 45788999999998874
No 162
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=40.13 E-value=1.6e+02 Score=26.63 Aligned_cols=34 Identities=15% Similarity=0.150 Sum_probs=20.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCC--cEEEEEc
Q 047833 3 QRKETIVLFPFMAQGHIIPFLALALHLEKTNK--YTITFVN 41 (473)
Q Consensus 3 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~rG--h~Vt~~~ 41 (473)
.++++|+++. +.|.+- ..|+++|.+ +| |+|+...
T Consensus 22 ~~~~~vlVtG--atG~iG--~~l~~~L~~-~g~~~~v~~~~ 57 (346)
T 4egb_A 22 SNAMNILVTG--GAGFIG--SNFVHYMLQ-SYETYKIINFD 57 (346)
T ss_dssp --CEEEEEET--TTSHHH--HHHHHHHHH-HCTTEEEEEEE
T ss_pred cCCCeEEEEC--CccHHH--HHHHHHHHh-hCCCcEEEEEe
Confidence 3455666553 344443 478899999 99 6666554
No 163
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=39.55 E-value=29 Score=31.70 Aligned_cols=46 Identities=17% Similarity=0.164 Sum_probs=35.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhccCCCCCCceEEe
Q 047833 6 ETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLRKLKSSVPQNSSINLLE 63 (473)
Q Consensus 6 ~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~ 63 (473)
+||+++..|+.|- .+|..|.+ .||+|+++.... .+.+.+ .++.+..
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~-~g~~V~~~~r~~-~~~i~~-----~Gl~~~~ 48 (320)
T 3i83_A 3 LNILVIGTGAIGS-----FYGALLAK-TGHCVSVVSRSD-YETVKA-----KGIRIRS 48 (320)
T ss_dssp CEEEEESCCHHHH-----HHHHHHHH-TTCEEEEECSTT-HHHHHH-----HCEEEEE
T ss_pred CEEEEECcCHHHH-----HHHHHHHh-CCCeEEEEeCCh-HHHHHh-----CCcEEee
Confidence 5899998887774 57889999 999999998765 466666 4555544
No 164
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=39.29 E-value=2.1e+02 Score=25.53 Aligned_cols=109 Identities=10% Similarity=0.038 Sum_probs=60.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC-CCcEEEEEcCCcchhhhhccCCCCCCceEEecCCCCCCCCCCCCCCCCC
Q 047833 3 QRKETIVLFPFMAQGHIIPFLALALHLEKT-NKYTITFVNTPLNLRKLKSSVPQNSSINLLEIPFDSIDHNLPPCTENTD 81 (473)
Q Consensus 3 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~-rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 81 (473)
.+|+||+++.++. || -+-+|..+.++- -..+|..+....... +.. .+...++.+..+|..
T Consensus 86 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~~~a-~~~-~A~~~gIp~~~~~~~-------------- 146 (287)
T 3nrb_A 86 TDRKKVVIMVSKF-DH--CLGDLLYRHRLGELDMEVVGIISNHPRE-ALS-VSLVGDIPFHYLPVT-------------- 146 (287)
T ss_dssp TCCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSCGG-GCC-CCCCTTSCEEECCCC--------------
T ss_pred CCCcEEEEEEeCC-Cc--CHHHHHHHHHCCCCCeEEEEEEeCChHH-HHH-HHHHcCCCEEEEecc--------------
Confidence 3577998777765 43 344555555541 235777665433221 111 111167777766521
Q ss_pred CCChhhHHHHHHHHHhhhHHHHHHHHhHhhhcCCCCccEEEECCCcc-hHHHHHHHhCCceEEEecc
Q 047833 82 SVPYHLVSKLIEATLSFKPHFKKLVNDLIDEQNGYKPLCIITDMFFG-WCKEIAQEYGIFHAIFIGG 147 (473)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~-~~~~~A~~~giP~v~~~~~ 147 (473)
... + ....+.+.+++++. +||+||.-.+.. -...+-+.+.-.++.++++
T Consensus 147 -~~~----r-----~~~~~~~~~~l~~~-------~~Dlivlagym~il~~~~l~~~~~~~iNiHpS 196 (287)
T 3nrb_A 147 -PAT----K-----AAQESQIKNIVTQS-------QADLIVLARYMQILSDDLSAFLSGRCINIHHS 196 (287)
T ss_dssp -GGG----H-----HHHHHHHHHHHHHH-------TCSEEEESSCCSCCCHHHHHHHTTSEEEEESS
T ss_pred -Ccc----h-----hhHHHHHHHHHHHh-------CCCEEEhhhhhhhcCHHHHhhccCCeEEECcc
Confidence 000 0 11234567888888 999999986644 3345556666678887664
No 165
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=39.27 E-value=43 Score=23.07 Aligned_cols=50 Identities=16% Similarity=0.290 Sum_probs=35.2
Q ss_pred hhCCcEEeccccccchhhH---HHHHHhhcceEEEecCCCCccCHHHHHHHHHHHHcC
Q 047833 368 SHGVPIIGWPLAAEQFYNS---KLLEEEIGVCVEVARGKSSEVLKKDIAAKIELVMNE 422 (473)
Q Consensus 368 ~~GvP~l~~P~~~DQ~~nA---~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~~ 422 (473)
-+|+|+++.--.+.|...- ....+. |+.--+-+ ..++++|.+.+++.|..
T Consensus 49 dngkplvvfvngasqndvnefqneakke-gvsydvlk----stdpeeltqrvreflkt 101 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQNEAKKE-GVSYDVLK----STDPEELTQRVREFLKT 101 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHHHHHHH-TCEEEEEE----CCCHHHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHHHHHhc-Ccchhhhc----cCCHHHHHHHHHHHHHh
Confidence 4789998887766665432 233445 77777665 67899999999987753
No 166
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=39.24 E-value=19 Score=33.69 Aligned_cols=45 Identities=20% Similarity=0.256 Sum_probs=32.3
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcc-hhhhhc
Q 047833 1 MAQRKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLN-LRKLKS 51 (473)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~-~~~v~~ 51 (473)
|+.+++||.|+-.|..| ..+|..|.+ .||+|++...... .+.+.+
T Consensus 25 m~~~~mkI~VIGaG~mG-----~alA~~La~-~G~~V~l~~r~~~~~~~i~~ 70 (356)
T 3k96_A 25 MEPFKHPIAILGAGSWG-----TALALVLAR-KGQKVRLWSYESDHVDEMQA 70 (356)
T ss_dssp --CCCSCEEEECCSHHH-----HHHHHHHHT-TTCCEEEECSCHHHHHHHHH
T ss_pred ccccCCeEEEECccHHH-----HHHHHHHHH-CCCeEEEEeCCHHHHHHHHH
Confidence 44456789999988777 468999999 9999999986543 233443
No 167
>1o97_D Electron transferring flavoprotein alpha-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 c.31.1.2 PDB: 1o95_D* 1o96_B* 1o94_D* 3clu_D* 3clt_D* 3clr_D* 3cls_D*
Probab=39.11 E-value=78 Score=28.90 Aligned_cols=42 Identities=14% Similarity=0.205 Sum_probs=32.0
Q ss_pred hhHHHHHHHHhHhhhcCCCCccEEEECCCcc---hHHHHHHHhCCceEEEec
Q 047833 98 FKPHFKKLVNDLIDEQNGYKPLCIITDMFFG---WCKEIAQEYGIFHAIFIG 146 (473)
Q Consensus 98 ~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~---~~~~~A~~~giP~v~~~~ 146 (473)
....+.+++++. +||+|++..... .+..+|..++.|.+.-.+
T Consensus 75 ~a~~La~~i~~~-------~pdlVL~g~ts~G~~laprlAa~L~~~~vtdv~ 119 (320)
T 1o97_D 75 FEASVSALIAAH-------NPSVVLLPHSVDSLGYASSLASKTGYGFATDVY 119 (320)
T ss_dssp HHHHHHHHHHHH-------CCSEEEEECSHHHHTTHHHHHHTSSCEEEEEEC
T ss_pred HHHHHHHHHHhc-------CCCEEEEeCCCchhhHHHHHHHHhCCCccccEE
Confidence 344556777887 899999987544 356899999999999654
No 168
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=39.02 E-value=2.1e+02 Score=25.49 Aligned_cols=106 Identities=8% Similarity=0.030 Sum_probs=62.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC-CCcEEEEEcCCc--chhhhhccCCCCCCceEEecCCCCCCCCCCCCCCC
Q 047833 3 QRKETIVLFPFMAQGHIIPFLALALHLEKT-NKYTITFVNTPL--NLRKLKSSVPQNSSINLLEIPFDSIDHNLPPCTEN 79 (473)
Q Consensus 3 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~-rGh~Vt~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 79 (473)
.+++||+++.++. || -+-+|..+.++- -..+|..+.... .....++ .++.+..+|.. . .
T Consensus 88 ~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~-----~gIp~~~~~~~-----~-~---- 149 (286)
T 3n0v_A 88 NHRPKVVIMVSKA-DH--CLNDLLYRQRIGQLGMDVVAVVSNHPDLEPLAHW-----HKIPYYHFALD-----P-K---- 149 (286)
T ss_dssp TCCCEEEEEESSC-CH--HHHHHHHHHHTTSSCCEEEEEEESSSTTHHHHHH-----TTCCEEECCCB-----T-T----
T ss_pred CCCcEEEEEEeCC-CC--CHHHHHHHHHCCCCCcEEEEEEeCcHHHHHHHHH-----cCCCEEEeCCC-----c-C----
Confidence 3467998877765 43 444555554441 246777665432 3344445 67777776621 0 0
Q ss_pred CCCCChhhHHHHHHHHHhhhHHHHHHHHhHhhhcCCCCccEEEECCCcc-hHHHHHHHhCCceEEEecc
Q 047833 80 TDSVPYHLVSKLIEATLSFKPHFKKLVNDLIDEQNGYKPLCIITDMFFG-WCKEIAQEYGIFHAIFIGG 147 (473)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~-~~~~~A~~~giP~v~~~~~ 147 (473)
.. ....+.+.+++++. +||+||.-.+.. -...+-+...-.++.++++
T Consensus 150 ----~r----------~~~~~~~~~~l~~~-------~~Dlivla~y~~il~~~~l~~~~~~~iNiHpS 197 (286)
T 3n0v_A 150 ----DK----------PGQERKVLQVIEET-------GAELVILARYMQVLSPELCRRLDGWAINIHHS 197 (286)
T ss_dssp ----BH----------HHHHHHHHHHHHHH-------TCSEEEESSCCSCCCHHHHHHTTTSEEEEEEC
T ss_pred ----CH----------HHHHHHHHHHHHhc-------CCCEEEecccccccCHHHHhhhcCCeEEeccc
Confidence 00 11234567888888 999999986643 3345556666677887654
No 169
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=38.81 E-value=1.2e+02 Score=27.08 Aligned_cols=136 Identities=13% Similarity=0.026 Sum_probs=68.9
Q ss_pred CHHHHHHHHHHHHhCCCceEEEECCCCCCCccccccccCCcEEEecccChHHhh-ccCCcceeEeccCcchHHHHHhh--
Q 047833 293 ATSQMMQLAMALEASGKNFIWVVRPPIGFDINSEIKCSGQGLVVHKWAPQVEIL-SHRSVSVFLSHCGWNSVLEALSH-- 369 (473)
Q Consensus 293 ~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll-~~~~v~~~I~HGG~gt~~eal~~-- 369 (473)
....+..+++.+.+.+..+++-.+...+ +. ... .....-..++ .+|+++.+|.|||+....+++..
T Consensus 136 ~d~~~~~~~~~a~e~glpv~iH~~~~~~--~~--~~~-------~~p~~~~~v~~~~P~l~ivl~H~G~~~~~~~~~l~~ 204 (291)
T 3irs_A 136 DDRRLYPLYAFCEDNGIPVIMMTGGNAG--PD--ITY-------TNPEHIDRVLGDFPDLTVVSSHGNWPWVQEIIHVAF 204 (291)
T ss_dssp TCGGGHHHHHHHHHTTCCEEEECSSSCS--SS--GGG-------GCHHHHHHHHHHCTTCCEEEEGGGTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCCeEEEeCCCCCC--CC--Ccc-------CCHHHHHHHHHHCCCCEEEeecCCcccHHHHHHHHh
Confidence 4566788899999999998888753210 00 000 0001122333 47888889999999877777653
Q ss_pred CCcEEeccccc---cchhhH--HHHHHhhcceEEEecCCCCccCHHHHHHHHHHH-HcCChhhHHHHHHHHHHHHH
Q 047833 370 GVPIIGWPLAA---EQFYNS--KLLEEEIGVCVEVARGKSSEVLKKDIAAKIELV-MNETEKGIELRKNAYEVREI 439 (473)
Q Consensus 370 GvP~l~~P~~~---DQ~~nA--~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~l-l~~~~~~~~~~~~a~~l~~~ 439 (473)
..|-+.+-..+ ..+.+. ..+.+.+|.--.+--+...-.+.....+.+.++ ++++...+-+.+||+++=..
T Consensus 205 ~~~nvy~~~Sg~~~~~~~~~~~~~~~~~~g~drllfgSD~P~~~~~~~~~~~~~l~l~~e~~~~i~~~NA~rl~~~ 280 (291)
T 3irs_A 205 RRPNLYLSPDMYLYNLPGHADFIQAANSFLADRMLFGTAYPMCPLKEYTEWFLTLPIKPDAMEKILHGNAERLLAQ 280 (291)
T ss_dssp HCTTEEEECGGGGSSSTTHHHHHHHHTTGGGGTBCCCCCBTSSCHHHHHHHHHTSSCCHHHHHHHHTHHHHHHHHH
T ss_pred HCCCeEecHHHHhccCCCHHHHHHHHHHhCcceEEEecCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHhCc
Confidence 23444443321 112111 112223354433332222334555555666554 22221333466677766543
No 170
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=38.77 E-value=75 Score=28.63 Aligned_cols=80 Identities=15% Similarity=0.130 Sum_probs=46.4
Q ss_pred EEEEeeCCcccCCHHHHHHHHHHHHhCCCceEEEECCCCCCCccccccccCCcEEEecccChHHhhccCCcceeEeccCc
Q 047833 281 VLYVSFGSQNTIATSQMMQLAMALEASGKNFIWVVRPPIGFDINSEIKCSGQGLVVHKWAPQVEILSHRSVSVFLSHCGW 360 (473)
Q Consensus 281 ~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~v~~~I~HGG~ 360 (473)
.|.++--|-.....+.+..+...|.+.+..+.+..... +... ...+. .+.. ..+.+|.-||-
T Consensus 12 ~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~----~~~a----------~~~~~--~~~~--~~d~vv~~GGD 73 (304)
T 3s40_A 12 LLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKE----QGDA----------TKYCQ--EFAS--KVDLIIVFGGD 73 (304)
T ss_dssp EEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCS----TTHH----------HHHHH--HHTT--TCSEEEEEECH
T ss_pred EEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccC----cchH----------HHHHH--Hhhc--CCCEEEEEccc
Confidence 44444433332334556677778888777765554211 0000 00010 1112 23469999999
Q ss_pred chHHHHHh------hCCcEEeccc
Q 047833 361 NSVLEALS------HGVPIIGWPL 378 (473)
Q Consensus 361 gt~~eal~------~GvP~l~~P~ 378 (473)
||+.|++. .++|+.++|.
T Consensus 74 GTl~~v~~~l~~~~~~~~l~iiP~ 97 (304)
T 3s40_A 74 GTVFECTNGLAPLEIRPTLAIIPG 97 (304)
T ss_dssp HHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred hHHHHHHHHHhhCCCCCcEEEecC
Confidence 99999875 5789999997
No 171
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=38.40 E-value=30 Score=26.27 Aligned_cols=44 Identities=9% Similarity=0.104 Sum_probs=28.1
Q ss_pred CCCCCcEEEEEcCC-CccCH-HHHHHHHHHHHhCCC--cEEEEEcCCcch
Q 047833 1 MAQRKETIVLFPFM-AQGHI-IPFLALALHLEKTNK--YTITFVNTPLNL 46 (473)
Q Consensus 1 ~~~~~~~il~~~~~-~~GH~-~p~l~La~~L~~~rG--h~Vt~~~~~~~~ 46 (473)
|+.+ +|++|+-+. -.-.. +-.+..|...++ +| |+|.++.-.+..
T Consensus 4 ~~~~-~K~~ivi~s~d~~~~~~~al~~A~~a~~-~G~~~eV~i~~~G~~v 51 (117)
T 2fb6_A 4 MSAN-DKLTILWTTDNKDTVFNMLAMYALNSKN-RGWWKHINIILWGASV 51 (117)
T ss_dssp SSTT-SEEEEEECCCCHHHHHHTHHHHHHHHHH-HTSCSEEEEEECSHHH
T ss_pred cccC-CeEEEEEEcCChHHHHHHHHHHHHHHHH-cCCCCcEEEEEECCee
Confidence 5555 566544443 33332 447788999999 88 899999755543
No 172
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=38.31 E-value=13 Score=32.35 Aligned_cols=22 Identities=14% Similarity=0.119 Sum_probs=19.1
Q ss_pred HHHHHHHHHhCCCcEEEEEcCCc
Q 047833 22 FLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 22 ~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
-.++|++|.+ +|++|++++.+.
T Consensus 32 G~aiA~~~~~-~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 32 GKIITETLLS-AGYEVCLITTKR 53 (232)
T ss_dssp HHHHHHHHHH-TTCEEEEEECTT
T ss_pred HHHHHHHHHH-CCCEEEEEeCCc
Confidence 4678999999 999999998664
No 173
>3ro0_A Pyrrolidone-carboxylate peptidase; hydrolase-hydrolase inhibitor complex; HET: TPT; 1.50A {Bacillus amyloliquefaciens} SCOP: c.56.4.1 PDB: 3rnz_A* 1aug_A
Probab=38.22 E-value=50 Score=28.36 Aligned_cols=27 Identities=19% Similarity=0.263 Sum_probs=21.6
Q ss_pred CcEEEEEcCCCcc--CHHHHHHHHHHHHh
Q 047833 5 KETIVLFPFMAQG--HIIPFLALALHLEK 31 (473)
Q Consensus 5 ~~~il~~~~~~~G--H~~p~l~La~~L~~ 31 (473)
|+|||+..|+-+| .+||...++++|.+
T Consensus 2 m~~VLvTGF~PF~~~~~NPS~~~v~~L~~ 30 (223)
T 3ro0_A 2 EKKVLLTGFDPFGGETVNPSWEAVKRLNG 30 (223)
T ss_dssp CEEEEEEEECCCTTCSCCHHHHHHHHTTT
T ss_pred CCEEEEEeCCCCCCCCCChHHHHHHHhcc
Confidence 5689988776433 58999999999977
No 174
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=38.21 E-value=17 Score=34.29 Aligned_cols=60 Identities=18% Similarity=0.350 Sum_probs=39.1
Q ss_pred hHHhhccCCcceeEeccCcchHHHHHhh----CC-cEEeccccccchhhHHHHHHhhcceEEEecCCCCccCHHHHHHHH
Q 047833 342 QVEILSHRSVSVFLSHCGWNSVLEALSH----GV-PIIGWPLAAEQFYNSKLLEEEIGVCVEVARGKSSEVLKKDIAAKI 416 (473)
Q Consensus 342 ~~~ll~~~~v~~~I~HGG~gt~~eal~~----Gv-P~l~~P~~~DQ~~nA~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i 416 (473)
...+-..++ ++|+=||-||+..+++. ++ |++.+... .+|.= ..++.+++.+++
T Consensus 108 ~~~~~~~~D--lVIvlGGDGTlL~aa~~~~~~~vpPiLGIN~G------------~lGFL--------t~~~~~~~~~al 165 (388)
T 3afo_A 108 EQDIVNRTD--LLVTLGGDGTILHGVSMFGNTQVPPVLAFALG------------TLGFL--------SPFDFKEHKKVF 165 (388)
T ss_dssp HHHHHHHCS--EEEEEESHHHHHHHHHTTTTSCCCCEEEEECS------------SCCSS--------CCEEGGGHHHHH
T ss_pred hhhcccCCC--EEEEEeCcHHHHHHHHHhcccCCCeEEEEECC------------CcccC--------CcCChHHHHHHH
Confidence 344444555 69999999999999764 57 78888631 11221 123446777788
Q ss_pred HHHHcCC
Q 047833 417 ELVMNET 423 (473)
Q Consensus 417 ~~ll~~~ 423 (473)
++++++.
T Consensus 166 ~~il~g~ 172 (388)
T 3afo_A 166 QEVISSR 172 (388)
T ss_dssp HHHHTTC
T ss_pred HHHhcCC
Confidence 8887764
No 175
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=38.03 E-value=47 Score=29.72 Aligned_cols=35 Identities=9% Similarity=0.123 Sum_probs=25.3
Q ss_pred CcEEE-EEcCCCccCHHHHH--HHHHHHHhCCCcEEEEE
Q 047833 5 KETIV-LFPFMAQGHIIPFL--ALALHLEKTNKYTITFV 40 (473)
Q Consensus 5 ~~~il-~~~~~~~GH~~p~l--~La~~L~~~rGh~Vt~~ 40 (473)
++||| |..+|-...++-.+ ...+.|++ .||+|+++
T Consensus 22 ~MKiLII~aHP~~~S~n~aL~~~~~~~l~~-~G~eV~v~ 59 (280)
T 4gi5_A 22 SMKVLLIYAHPEPRSLNGALKNFAIRHLQQ-AGHEVQVS 59 (280)
T ss_dssp CCEEEEEECCSCTTSHHHHHHHHHHHHHHH-TTCEEEEE
T ss_pred CCeEEEEEeCCCCccHHHHHHHHHHHHHHH-CCCeEEEE
Confidence 45665 66777666666544 46778889 99999987
No 176
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...
Probab=37.96 E-value=80 Score=30.20 Aligned_cols=32 Identities=16% Similarity=0.079 Sum_probs=24.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 047833 6 ETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTP 43 (473)
Q Consensus 6 ~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~ 43 (473)
.||+++.. | ...+.+++++++ .|++|+++.+.
T Consensus 3 k~ilI~g~---g--~~~~~~~~a~~~-~G~~vv~v~~~ 34 (449)
T 2w70_A 3 DKIVIANR---G--EIALRILRACKE-LGIKTVAVHSS 34 (449)
T ss_dssp SEEEECCC---H--HHHHHHHHHHHH-HTCEEEEEEEG
T ss_pred ceEEEeCC---c--HHHHHHHHHHHH-cCCeEEEEecc
Confidence 47887753 3 346789999999 99999988643
No 177
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=37.52 E-value=1.7e+02 Score=26.09 Aligned_cols=18 Identities=22% Similarity=0.200 Sum_probs=11.2
Q ss_pred HHHHHHhCCCceEEEECC
Q 047833 300 LAMALEASGKNFIWVVRP 317 (473)
Q Consensus 300 ~~~al~~~~~~~i~~~~~ 317 (473)
+++.+.+.+..++++.|.
T Consensus 126 LLr~va~~gkPVilK~G~ 143 (285)
T 3sz8_A 126 LVVAIAKAGKPVNVKKPQ 143 (285)
T ss_dssp HHHHHHHTSSCEEEECCT
T ss_pred HHHHHHccCCcEEEeCCC
Confidence 444455667777777763
No 178
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=37.46 E-value=1.3e+02 Score=28.84 Aligned_cols=32 Identities=3% Similarity=-0.059 Sum_probs=25.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEc
Q 047833 4 RKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVN 41 (473)
Q Consensus 4 ~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~ 41 (473)
+|++|.++..| ++ -+.+|..|.+ +||+|+.+=
T Consensus 20 ~m~~IaViGlG---YV--GLp~A~~~A~-~G~~V~g~D 51 (444)
T 3vtf_A 20 HMASLSVLGLG---YV--GVVHAVGFAL-LGHRVVGYD 51 (444)
T ss_dssp CCCEEEEECCS---HH--HHHHHHHHHH-HTCEEEEEC
T ss_pred CCCEEEEEccC---HH--HHHHHHHHHh-CCCcEEEEE
Confidence 57789888665 33 3889999999 999998863
No 179
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=37.42 E-value=54 Score=25.83 Aligned_cols=97 Identities=15% Similarity=0.117 Sum_probs=60.0
Q ss_pred EEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhccCCCCCCceEEecCCCCCCCCCCCCCCCCCCCChhhH
Q 047833 9 VLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLRKLKSSVPQNSSINLLEIPFDSIDHNLPPCTENTDSVPYHLV 88 (473)
Q Consensus 9 l~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 88 (473)
+|++.. ..+=.-++.+|+.|.+ .|+++. ++......+++ .++....+... +.+.. .
T Consensus 27 vliSv~-d~dK~~l~~~a~~l~~-lGf~i~--AT~GTa~~L~~-----~Gi~v~~v~k~------~egg~-~-------- 82 (143)
T 2yvq_A 27 ILIGIQ-QSFRPRFLGVAEQLHN-EGFKLF--ATEATSDWLNA-----NNVPATPVAWP------SQEGQ-N-------- 82 (143)
T ss_dssp EEEECC-GGGHHHHHHHHHHHHT-TTCEEE--EEHHHHHHHHH-----TTCCCEEECCG------GGC------------
T ss_pred EEEEec-ccchHHHHHHHHHHHH-CCCEEE--ECchHHHHHHH-----cCCeEEEEEec------cCCCc-c--------
Confidence 455543 2466778999999999 999844 34555667777 56666655522 11100 0
Q ss_pred HHHHHHHHhhhHHHHHHHHhHhhhcCCCCccEEEECCCcc--------hHHHHHHHhCCceEEE
Q 047833 89 SKLIEATLSFKPHFKKLVNDLIDEQNGYKPLCIITDMFFG--------WCKEIAQEYGIFHAIF 144 (473)
Q Consensus 89 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~--------~~~~~A~~~giP~v~~ 144 (473)
...+.+.+.+++. +.|+||...--. .....|-..+||+++.
T Consensus 83 --------~~~~~i~d~i~~g-------~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T~ 131 (143)
T 2yvq_A 83 --------PSLSSIRKLIRDG-------SIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLTN 131 (143)
T ss_dssp ----------CBCHHHHHHTT-------SCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEECS
T ss_pred --------cccccHHHHHHCC-------CceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEcC
Confidence 0002345667777 899999975331 2335788899999884
No 180
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=37.38 E-value=97 Score=26.90 Aligned_cols=21 Identities=14% Similarity=0.344 Sum_probs=16.7
Q ss_pred hhhHHHHHHHHhHhhhcCCCCccEEEEC
Q 047833 97 SFKPHFKKLVNDLIDEQNGYKPLCIITD 124 (473)
Q Consensus 97 ~~~~~~~~~l~~~~~~~~~~~pD~Vv~d 124 (473)
.....+.+++++. +||+|++-
T Consensus 84 ~~~~~l~~~ir~~-------~PdvV~t~ 104 (242)
T 2ixd_A 84 EYIREIVKVIRTY-------KPKLVFAP 104 (242)
T ss_dssp HHHHHHHHHHHHH-------CCSEEEEE
T ss_pred HHHHHHHHHHHHc-------CCCEEEEC
Confidence 3456778889999 99999985
No 181
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=37.26 E-value=2e+02 Score=24.83 Aligned_cols=37 Identities=14% Similarity=-0.109 Sum_probs=25.0
Q ss_pred cEEEEEcCCCccCH-HHHHHHHHHHHhCCCcEEEEEcCC
Q 047833 6 ETIVLFPFMAQGHI-IPFLALALHLEKTNKYTITFVNTP 43 (473)
Q Consensus 6 ~~il~~~~~~~GH~-~p~l~La~~L~~~rGh~Vt~~~~~ 43 (473)
+||+++-.-+.-++ ..+...++.+.. .|.+|.+++.+
T Consensus 2 mrilvINPnts~~~T~~i~~~~~~~~~-p~~~i~~~t~~ 39 (245)
T 3qvl_A 2 VRIQVINPNTSLAMTETIGAAARAVAA-PGTEILAVCPR 39 (245)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHHCC-TTEEEEEECCS
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHhcC-CCCEEEEEeCC
Confidence 46765554454455 466678888888 88888888743
No 182
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=37.08 E-value=50 Score=24.47 Aligned_cols=31 Identities=10% Similarity=0.076 Sum_probs=21.2
Q ss_pred CccEEEECCCcc--hHHHHHHHh-------CCceEEEecc
Q 047833 117 KPLCIITDMFFG--WCKEIAQEY-------GIFHAIFIGG 147 (473)
Q Consensus 117 ~pD~Vv~d~~~~--~~~~~A~~~-------giP~v~~~~~ 147 (473)
+||+||.|...+ .+..+.+.+ ++|.+.++..
T Consensus 46 ~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~ 85 (122)
T 3gl9_A 46 TPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAK 85 (122)
T ss_dssp CCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESC
T ss_pred CCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecC
Confidence 899999997665 344444432 5888887654
No 183
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=36.98 E-value=43 Score=30.84 Aligned_cols=73 Identities=14% Similarity=0.064 Sum_probs=55.6
Q ss_pred CCHHHHHHHHHHHHhCCCceEEEECCCCCCCccccccccCCcEEEecccChHHhhccCCcceeEeccCcchHHHHHh--h
Q 047833 292 IATSQMMQLAMALEASGKNFIWVVRPPIGFDINSEIKCSGQGLVVHKWAPQVEILSHRSVSVFLSHCGWNSVLEALS--H 369 (473)
Q Consensus 292 ~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~v~~~I~HGG~gt~~eal~--~ 369 (473)
.+.+....+.+++...+.+.||.+...- .-.++.+++++..+-++|+. ||-+.-..+++-+++ .
T Consensus 62 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~------------g~~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~al~~~~ 127 (331)
T 4e5s_A 62 SISSRVQDLHEAFRDPNVKAILTTLGGY------------NSNGLLKYLDYDLIRENPKF--FCGYSDITALNNAIYTKT 127 (331)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCS------------CGGGGGGGCCHHHHHTSCCE--EEECGGGHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEccccc------------cHHHHHhhcChhHHHhCCeE--EEEecchHHHHHHHHHhh
Confidence 3467788899999999999999886541 22344577777777778874 998888888888887 5
Q ss_pred CCcEEeccc
Q 047833 370 GVPIIGWPL 378 (473)
Q Consensus 370 GvP~l~~P~ 378 (473)
|++.+.=|.
T Consensus 128 G~~t~hGp~ 136 (331)
T 4e5s_A 128 GLVTYSGPH 136 (331)
T ss_dssp CBCEEECCC
T ss_pred CCcEEEccc
Confidence 888887776
No 184
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=36.84 E-value=90 Score=25.34 Aligned_cols=46 Identities=11% Similarity=0.080 Sum_probs=33.0
Q ss_pred HHhhhHHHHHHHHhHhhhcCCCCccEEEECCCcch---------------HHHHHHHhCCceEEEecc
Q 047833 95 TLSFKPHFKKLVNDLIDEQNGYKPLCIITDMFFGW---------------CKEIAQEYGIFHAIFIGG 147 (473)
Q Consensus 95 ~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~~---------------~~~~A~~~giP~v~~~~~ 147 (473)
+....+.+.++++++ +||.+..+..++. +..++...|+|+.-+.|.
T Consensus 48 L~~I~~~l~~~i~~~-------~Pd~vaiE~~F~~~n~~sal~lgqarGv~~la~~~~glpv~eytP~ 108 (166)
T 4ep4_A 48 VGRIHARVLEVLHRF-------RPEAVAVEEQFFYRQNELAYKVGWALGAVLVAAFEAGVPVYAYGPM 108 (166)
T ss_dssp HHHHHHHHHHHHHHH-------CCSEEEEECCCCSSCSHHHHHHHHHHHHHHHHHHHHTCCEEEECHH
T ss_pred HHHHHHHHHHHHHHh-------CCCEEEEeehhhccChHHHHHHHHHHHHHHHHHHHcCCCEEEECHH
Confidence 344556778999999 9999888855531 225667889999887543
No 185
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=36.82 E-value=62 Score=31.03 Aligned_cols=33 Identities=3% Similarity=-0.080 Sum_probs=24.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 6 ETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 6 ~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
.||+++.. | ...+.+++++++ .|++|+++.+..
T Consensus 2 k~ilI~g~---g--~~~~~i~~a~~~-~G~~vv~v~~~~ 34 (451)
T 2vpq_A 2 KKVLIANR---G--EIAVRIIRACRD-LGIQTVAIYSEG 34 (451)
T ss_dssp CEEEECCC---H--HHHHHHHHHHHH-TTCEEEEEEEGG
T ss_pred ceEEEeCC---C--HHHHHHHHHHHH-cCCEEEEEeccc
Confidence 47887653 3 256789999999 999999986543
No 186
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=36.78 E-value=77 Score=29.37 Aligned_cols=37 Identities=22% Similarity=0.373 Sum_probs=23.9
Q ss_pred CeEEEEeeCCcccCCHHHHHHHHHHHHhCCCceEEEECC
Q 047833 279 TSVLYVSFGSQNTIATSQMMQLAMALEASGKNFIWVVRP 317 (473)
Q Consensus 279 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 317 (473)
+.+++.+.||.+...+ ...+++.|.+.|++++|++..
T Consensus 3 ~~i~i~~GGTgGHi~p--alala~~L~~~g~~V~~vg~~ 39 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFP--ALACAREFQARGYAVHWLGTP 39 (365)
T ss_dssp CEEEEECCSSHHHHHH--HHHHHHHHHHTTCEEEEEECS
T ss_pred CcEEEEcCCCHHHHHH--HHHHHHHHHhCCCEEEEEECC
Confidence 3466666666543222 235778888899999988753
No 187
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=36.67 E-value=25 Score=29.57 Aligned_cols=41 Identities=12% Similarity=0.242 Sum_probs=29.7
Q ss_pred HHHHHHHhHhhhcCCCCccEEEECCCcchHHHHHHHhCCceEEEecch
Q 047833 101 HFKKLVNDLIDEQNGYKPLCIITDMFFGWCKEIAQEYGIFHAIFIGGG 148 (473)
Q Consensus 101 ~~~~~l~~~~~~~~~~~pD~Vv~d~~~~~~~~~A~~~giP~v~~~~~~ 148 (473)
.+.+.+++..+. +.|+||.+.. ...+|+++|+|.+.+.+..
T Consensus 130 e~~~~i~~l~~~----G~~vvVG~~~---~~~~A~~~Gl~~vli~sg~ 170 (196)
T 2q5c_A 130 EITTLISKVKTE----NIKIVVSGKT---VTDEAIKQGLYGETINSGE 170 (196)
T ss_dssp GHHHHHHHHHHT----TCCEEEECHH---HHHHHHHTTCEEEECCCCH
T ss_pred HHHHHHHHHHHC----CCeEEECCHH---HHHHHHHcCCcEEEEecCH
Confidence 334444444333 7999999954 5789999999999987643
No 188
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=36.50 E-value=1.7e+02 Score=28.73 Aligned_cols=34 Identities=18% Similarity=0.029 Sum_probs=27.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 047833 4 RKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNT 42 (473)
Q Consensus 4 ~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~ 42 (473)
+..||.|+..++.| +-.+|+.|.+ +|++|+..=.
T Consensus 18 ~~~~i~~iGiGg~G----ms~lA~~l~~-~G~~V~~sD~ 51 (524)
T 3hn7_A 18 QGMHIHILGICGTF----MGSLALLARA-LGHTVTGSDA 51 (524)
T ss_dssp -CCEEEEETTTSHH----HHHHHHHHHH-TTCEEEEEES
T ss_pred cCCEEEEEEecHhh----HHHHHHHHHh-CCCEEEEECC
Confidence 35689999998776 6678999999 9999998643
No 189
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=36.46 E-value=31 Score=27.16 Aligned_cols=36 Identities=11% Similarity=0.046 Sum_probs=29.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
..++++++.|+ =+.|++.+++.|.+ +|.+|+++ ...
T Consensus 18 ~~~~llIaGG~--GiaPl~sm~~~l~~-~~~~v~l~-g~R 53 (142)
T 3lyu_A 18 FGKILAIGAYT--GIVEVYPIAKAWQE-IGNDVTTL-HVT 53 (142)
T ss_dssp CSEEEEEEETT--HHHHHHHHHHHHHH-TTCEEEEE-EEE
T ss_pred CCeEEEEECcC--cHHHHHHHHHHHHh-cCCcEEEE-EeC
Confidence 34788888764 49999999999999 99999998 443
No 190
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=36.45 E-value=36 Score=31.19 Aligned_cols=34 Identities=9% Similarity=0.038 Sum_probs=28.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 047833 4 RKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNT 42 (473)
Q Consensus 4 ~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~ 42 (473)
.+.||.|+..|..| +-.+|+.|.+ +||+|+..=.
T Consensus 3 ~~~~i~~iGiGg~G----ms~~A~~L~~-~G~~V~~~D~ 36 (326)
T 3eag_A 3 AMKHIHIIGIGGTF----MGGLAAIAKE-AGFEVSGCDA 36 (326)
T ss_dssp CCCEEEEESCCSHH----HHHHHHHHHH-TTCEEEEEES
T ss_pred CCcEEEEEEECHHH----HHHHHHHHHh-CCCEEEEEcC
Confidence 46799999999887 4469999999 9999999743
No 191
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=36.41 E-value=18 Score=32.67 Aligned_cols=71 Identities=15% Similarity=0.024 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHhCCCceEEEECCCCCCCccccccccCCcEEEecccChHHhhccCCcceeEeccCcchHHHHHhh----C
Q 047833 295 SQMMQLAMALEASGKNFIWVVRPPIGFDINSEIKCSGQGLVVHKWAPQVEILSHRSVSVFLSHCGWNSVLEALSH----G 370 (473)
Q Consensus 295 ~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~v~~~I~HGG~gt~~eal~~----G 370 (473)
+....+.+.|.+.+..+.+..... .....+ .. .......+-..++ ++|+=||-||+.+++.. +
T Consensus 21 ~~~~~i~~~l~~~g~~v~~~~~~~-------~~~~~~-~~---~~~~~~~~~~~~D--~vi~~GGDGT~l~a~~~~~~~~ 87 (292)
T 2an1_A 21 TTHEMLYRWLCDQGYEVIVEQQIA-------HELQLK-NV---PTGTLAEIGQQAD--LAVVVGGDGNMLGAARTLARYD 87 (292)
T ss_dssp CHHHHHHHHHHHTTCEEEEEHHHH-------HHTTCS-SC---CEECHHHHHHHCS--EEEECSCHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHCCCEEEEecchh-------hhcccc-cc---cccchhhcccCCC--EEEEEcCcHHHHHHHHHhhcCC
Confidence 456667777777777755432100 000000 00 1112223333444 69999999999999854 7
Q ss_pred CcEEeccc
Q 047833 371 VPIIGWPL 378 (473)
Q Consensus 371 vP~l~~P~ 378 (473)
+|++.++.
T Consensus 88 ~P~lGI~~ 95 (292)
T 2an1_A 88 INVIGINR 95 (292)
T ss_dssp CEEEEBCS
T ss_pred CCEEEEEC
Confidence 89998873
No 192
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=36.22 E-value=25 Score=31.48 Aligned_cols=33 Identities=21% Similarity=0.174 Sum_probs=23.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 047833 6 ETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTP 43 (473)
Q Consensus 6 ~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~ 43 (473)
|||+++ |+.|-+- -+|++.|.+ +||+|+.++-.
T Consensus 1 MkILVT--GatGfIG--~~L~~~L~~-~G~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLVG--GGTGFIG--TALTQLLNA-RGHEVTLVSRK 33 (298)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHH-TTCEEEEEESS
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHH-CCCEEEEEECC
Confidence 466655 3445443 467899999 99999998743
No 193
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=36.15 E-value=21 Score=33.31 Aligned_cols=37 Identities=24% Similarity=0.267 Sum_probs=29.0
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 047833 1 MAQRKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTP 43 (473)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~ 43 (473)
|+.+..+|+++-.|..| +.+|..|++ +|++|+++-..
T Consensus 1 Mm~~~~dVvIIGgGi~G-----l~~A~~La~-~G~~V~lle~~ 37 (382)
T 1y56_B 1 MLPEKSEIVVIGGGIVG-----VTIAHELAK-RGEEVTVIEKR 37 (382)
T ss_dssp -CCSBCSEEEECCSHHH-----HHHHHHHHH-TTCCEEEECSS
T ss_pred CCCCcCCEEEECCCHHH-----HHHHHHHHH-CCCeEEEEeCC
Confidence 55556789999887555 788999999 99999998543
No 194
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=36.13 E-value=32 Score=31.36 Aligned_cols=34 Identities=9% Similarity=0.052 Sum_probs=27.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcc
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLN 45 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~ 45 (473)
+++|+++..+ ....+++++++ +||+|.++.....
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~-~G~~v~~~~~~~~ 35 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKD-EGFETIAFGSSKV 35 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHH-TTCCEEEESCGGG
T ss_pred ceEEEEECCh------hHHHHHHHHHh-CCCEEEEEECCCC
Confidence 3589888876 56789999999 9999999986653
No 195
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=35.75 E-value=41 Score=26.65 Aligned_cols=34 Identities=18% Similarity=0.154 Sum_probs=25.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
..+|+++..|..| ..+++.|.+ +|++|+++....
T Consensus 19 ~~~v~IiG~G~iG-----~~la~~L~~-~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLG-----SLIANLASS-SGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHH-TTCEEEEEESCG
T ss_pred CCcEEEECCCHHH-----HHHHHHHHh-CCCeEEEEECCH
Confidence 4588888654444 567899999 999999987544
No 196
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=35.57 E-value=31 Score=31.88 Aligned_cols=35 Identities=23% Similarity=0.406 Sum_probs=28.4
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEc
Q 047833 1 MAQRKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVN 41 (473)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~ 41 (473)
|+.++.+|+++-.|-.| +.+|.+|++ +|++|+++-
T Consensus 2 ~m~~~~dVvVIG~Gi~G-----ls~A~~La~-~G~~V~vle 36 (363)
T 1c0p_A 2 MMHSQKRVVVLGSGVIG-----LSSALILAR-KGYSVHILA 36 (363)
T ss_dssp CCCCSCEEEEECCSHHH-----HHHHHHHHH-TTCEEEEEE
T ss_pred CCCCCCCEEEECCCHHH-----HHHHHHHHh-CCCEEEEEe
Confidence 55556789999888444 788999999 999999984
No 197
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=35.32 E-value=34 Score=28.44 Aligned_cols=39 Identities=15% Similarity=0.242 Sum_probs=26.1
Q ss_pred CCCCCcEEEEEcCCCccCHHHHH-HHHHHHHhCCCcEEEEEcC
Q 047833 1 MAQRKETIVLFPFMAQGHIIPFL-ALALHLEKTNKYTITFVNT 42 (473)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~p~l-~La~~L~~~rGh~Vt~~~~ 42 (473)
|+ +|+||+++.+. .|+..-+. .+++.|.+ .|++|.++--
T Consensus 1 M~-~mmkilii~~S-~g~T~~la~~i~~~l~~-~g~~v~~~~l 40 (199)
T 2zki_A 1 MS-CKPNILVLFYG-YGSIVELAKEIGKGAEE-AGAEVKIRRV 40 (199)
T ss_dssp ---CCCEEEEEECC-SSHHHHHHHHHHHHHHH-HSCEEEEEEC
T ss_pred CC-CCcEEEEEEeC-ccHHHHHHHHHHHHHHh-CCCEEEEEeh
Confidence 44 35688877666 88766554 45677777 8999988753
No 198
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=35.22 E-value=52 Score=28.44 Aligned_cols=42 Identities=14% Similarity=0.025 Sum_probs=29.8
Q ss_pred hHHHHHHHHhHhhhcCCCCccEEEECCCcch-------HHHHHHHhCCceEEEe
Q 047833 99 KPHFKKLVNDLIDEQNGYKPLCIITDMFFGW-------CKEIAQEYGIFHAIFI 145 (473)
Q Consensus 99 ~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~~-------~~~~A~~~giP~v~~~ 145 (473)
.+.+.++++++.. +||++++|..... |..+.-.+++|+|-+.
T Consensus 94 ~P~ll~al~~L~~-----~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVA 142 (237)
T 3goc_A 94 IPTVLAALDALPC-----PPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVA 142 (237)
T ss_dssp HHHHHHHHHTSSS-----CCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEE
T ss_pred HHHHHHHHHhcCC-----CCCEEEEeCceeecCCCcchhheeeeecCCCEEeee
Confidence 4555666666532 6999999965432 4578888999999973
No 199
>3lac_A Pyrrolidone-carboxylate peptidase; alpha beta class, three layer sandwich, hydrolase, protease, thiol protease, structural genomics; 2.00A {Bacillus anthracis}
Probab=34.94 E-value=51 Score=28.17 Aligned_cols=27 Identities=30% Similarity=0.357 Sum_probs=21.0
Q ss_pred CcEEEEEcCCCcc--CHHHHHHHHHHHHh
Q 047833 5 KETIVLFPFMAQG--HIIPFLALALHLEK 31 (473)
Q Consensus 5 ~~~il~~~~~~~G--H~~p~l~La~~L~~ 31 (473)
|+|||+..|+-+| .+||...++++|.+
T Consensus 1 m~~VLvTGF~PF~~~~~NPS~~~v~~L~~ 29 (215)
T 3lac_A 1 MKTVLLTGFDPFGGESINPAWEVAKSLHE 29 (215)
T ss_dssp CEEEEEEEECCCTTCSCCHHHHHHHTTTT
T ss_pred CCEEEEEecCCCCCCCCChHHHHHHHhcc
Confidence 4589988886444 37999999999966
No 200
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=34.84 E-value=45 Score=33.33 Aligned_cols=44 Identities=18% Similarity=0.181 Sum_probs=38.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhh
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLRKL 49 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v 49 (473)
+.+|++.+.++-.|-....-++..|.. +|++|+.++.....+.+
T Consensus 98 ~~kVLlatv~GD~HdiG~~iva~~L~~-~G~eVi~LG~~vP~e~i 141 (579)
T 3bul_A 98 NGKMVIATVKGDVHDIGKNIVGVVLQC-NNYEIVDLGVMVPAEKI 141 (579)
T ss_dssp SCEEEEEEBTTCCCCHHHHHHHHHHHT-TTCEEEECCSSBCHHHH
T ss_pred CCeEEEEECCCCCchHHHHHHHHHHHH-CCCEEEECCCCCCHHHH
Confidence 568999999999999999999999999 99999999876654443
No 201
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=34.66 E-value=69 Score=27.74 Aligned_cols=39 Identities=13% Similarity=0.135 Sum_probs=28.3
Q ss_pred CcEEEEEcCCCc-----------cCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 5 KETIVLFPFMAQ-----------GHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 5 ~~~il~~~~~~~-----------GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
|+||+++..... -...=+......|++ .|++|+++++..
T Consensus 3 m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~-ag~~v~~~s~~g 52 (243)
T 1rw7_A 3 PKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRK-EGFEVDFVSETG 52 (243)
T ss_dssp CCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHH-TTCEEEEECSSS
T ss_pred CceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHH-CCCEEEEECCCC
Confidence 458887765421 244567778889999 999999998654
No 202
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=34.54 E-value=26 Score=32.02 Aligned_cols=42 Identities=10% Similarity=0.181 Sum_probs=30.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhc
Q 047833 4 RKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLRKLKS 51 (473)
Q Consensus 4 ~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v~~ 51 (473)
.++||+++..|+.| ..+|..|.+ .||+|+++..+...+.+.+
T Consensus 18 ~~~kI~IiGaGa~G-----~~~a~~L~~-~G~~V~l~~~~~~~~~i~~ 59 (318)
T 3hwr_A 18 QGMKVAIMGAGAVG-----CYYGGMLAR-AGHEVILIARPQHVQAIEA 59 (318)
T ss_dssp --CEEEEESCSHHH-----HHHHHHHHH-TTCEEEEECCHHHHHHHHH
T ss_pred cCCcEEEECcCHHH-----HHHHHHHHH-CCCeEEEEEcHhHHHHHHh
Confidence 46789999888777 467889999 9999999943334455555
No 203
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=34.54 E-value=40 Score=28.51 Aligned_cols=38 Identities=26% Similarity=0.232 Sum_probs=25.5
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 1 MAQRKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
|+. |++|+++. +.|.+- ..|++.|.+ +||+|+.++-..
T Consensus 1 M~~-m~~ilItG--atG~iG--~~l~~~L~~-~g~~V~~~~r~~ 38 (227)
T 3dhn_A 1 MEK-VKKIVLIG--ASGFVG--SALLNEALN-RGFEVTAVVRHP 38 (227)
T ss_dssp --C-CCEEEEET--CCHHHH--HHHHHHHHT-TTCEEEEECSCG
T ss_pred CCC-CCEEEEEc--CCchHH--HHHHHHHHH-CCCEEEEEEcCc
Confidence 543 56777663 445443 578899999 999999987543
No 204
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=34.44 E-value=35 Score=30.43 Aligned_cols=34 Identities=6% Similarity=0.143 Sum_probs=26.3
Q ss_pred CCcEEEEEcC-CCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 047833 4 RKETIVLFPF-MAQGHIIPFLALALHLEKTNKYTITFVNTP 43 (473)
Q Consensus 4 ~~~~il~~~~-~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~ 43 (473)
.|++|.|+.. |..| ..+|+.|.+ .||+|+++...
T Consensus 10 mmm~I~iIG~tG~mG-----~~la~~l~~-~g~~V~~~~r~ 44 (286)
T 3c24_A 10 GPKTVAILGAGGKMG-----ARITRKIHD-SAHHLAAIEIA 44 (286)
T ss_dssp CCCEEEEETTTSHHH-----HHHHHHHHH-SSSEEEEECCS
T ss_pred cCCEEEEECCCCHHH-----HHHHHHHHh-CCCEEEEEECC
Confidence 3569999887 7555 467889999 99999987643
No 205
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=34.34 E-value=37 Score=24.99 Aligned_cols=35 Identities=20% Similarity=0.253 Sum_probs=24.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCC-cEEEEEcCCc
Q 047833 4 RKETIVLFPFMAQGHIIPFLALALHLEKTNK-YTITFVNTPL 44 (473)
Q Consensus 4 ~~~~il~~~~~~~GH~~p~l~La~~L~~~rG-h~Vt~~~~~~ 44 (473)
.+++|+++..|..| ..+++.|.+ +| |+|+++....
T Consensus 4 ~~~~v~I~G~G~iG-----~~~~~~l~~-~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 4 MRWNICVVGAGKIG-----QMIAALLKT-SSNYSVTVADHDL 39 (118)
T ss_dssp TCEEEEEECCSHHH-----HHHHHHHHH-CSSEEEEEEESCH
T ss_pred CcCeEEEECCCHHH-----HHHHHHHHh-CCCceEEEEeCCH
Confidence 45678877543333 467889999 99 9998887544
No 206
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=34.07 E-value=95 Score=30.28 Aligned_cols=40 Identities=8% Similarity=-0.095 Sum_probs=34.0
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCC-CcEEEEEcCCcchhh
Q 047833 8 IVLFPFMAQGHIIPFLALALHLEKTN-KYTITFVNTPLNLRK 48 (473)
Q Consensus 8 il~~~~~~~GH~~p~l~La~~L~~~r-Gh~Vt~~~~~~~~~~ 48 (473)
+++...|+.|-..-.+.+|..+.. + |..|.+++.+...+.
T Consensus 245 ~li~G~pG~GKT~lal~~a~~~a~-~~g~~vl~~s~E~s~~~ 285 (503)
T 1q57_A 245 IMVTSGSGMVMSTFVRQQALQWGT-AMGKKVGLAMLEESVEE 285 (503)
T ss_dssp EEEEESSCHHHHHHHHHHHHHHTT-TSCCCEEEEESSSCHHH
T ss_pred EEEeecCCCCchHHHHHHHHHHHH-hcCCcEEEEeccCCHHH
Confidence 567777899999999999999988 7 999999998876543
No 207
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=33.65 E-value=1.2e+02 Score=28.10 Aligned_cols=36 Identities=19% Similarity=0.384 Sum_probs=21.9
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 047833 1 MAQRKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTP 43 (473)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~ 43 (473)
|+.+++||+++. + |.+-. .+|+.|.+ .|+|+++.-.
T Consensus 12 ~~g~~mkilvlG--a-G~vG~--~~~~~L~~--~~~v~~~~~~ 47 (365)
T 3abi_A 12 IEGRHMKVLILG--A-GNIGR--AIAWDLKD--EFDVYIGDVN 47 (365)
T ss_dssp ----CCEEEEEC--C-SHHHH--HHHHHHTT--TSEEEEEESC
T ss_pred ccCCccEEEEEC--C-CHHHH--HHHHHHhc--CCCeEEEEcC
Confidence 677788999884 4 55543 45677755 6899987643
No 208
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=33.57 E-value=56 Score=24.66 Aligned_cols=39 Identities=13% Similarity=0.043 Sum_probs=28.5
Q ss_pred EE-EEEcCCCccCH--HHHHHHHHHHHhCCCcEEEEEcCCcch
Q 047833 7 TI-VLFPFMAQGHI--IPFLALALHLEKTNKYTITFVNTPLNL 46 (473)
Q Consensus 7 ~i-l~~~~~~~GH~--~p~l~La~~L~~~rGh~Vt~~~~~~~~ 46 (473)
|+ +++..+-+|+- .-.+.+|.++.+ .||+|.++-..+-.
T Consensus 3 k~~~vv~~~P~g~~~~~~al~~a~a~~a-~~~~v~vff~~DGV 44 (119)
T 2d1p_B 3 RIAFVFSTAPHGTAAGREGLDALLATSA-LTDDLAVFFIADGV 44 (119)
T ss_dssp CEEEEECSCTTTSTHHHHHHHHHHHHHT-TCSCEEEEECGGGG
T ss_pred EEEEEEcCCCCCcHHHHHHHHHHHHHHh-CCCCEEEEEehHHH
Confidence 34 45666666766 556788999999 99999998766643
No 209
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=33.55 E-value=1.3e+02 Score=26.89 Aligned_cols=80 Identities=14% Similarity=0.071 Sum_probs=48.8
Q ss_pred CcEEEEEcCCcchhhhhccCCCCCCceEEecCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHhhhHHHHHHHHhHhhhc
Q 047833 34 KYTITFVNTPLNLRKLKSSVPQNSSINLLEIPFDSIDHNLPPCTENTDSVPYHLVSKLIEATLSFKPHFKKLVNDLIDEQ 113 (473)
Q Consensus 34 Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 113 (473)
.....+++++.+.-.... .|++...+.. ..++.+ +. ......+.+.+++.
T Consensus 178 ~~~~~v~~H~af~Yf~~~-----yGl~~~~~~~------~~~~~e-----ps----------~~~l~~l~~~ik~~---- 227 (286)
T 3gi1_A 178 RSKTFVTQHTAFSYLAKR-----FGLKQLGISG------ISPEQE-----PS----------PRQLKEIQDFVKEY---- 227 (286)
T ss_dssp SCCEEEEEESCCHHHHHH-----TTCEEEEEEC------SCC--------CC----------HHHHHHHHHHHHHT----
T ss_pred CCCEEEEECCchHHHHHH-----CCCeEeeccc------cCCCCC-----CC----------HHHHHHHHHHHHHc----
Confidence 344455667777777777 6667665441 111101 11 12234445666666
Q ss_pred CCCCccEEEECCCcc--hHHHHHHHhCCceEEEec
Q 047833 114 NGYKPLCIITDMFFG--WCKEIAQEYGIFHAIFIG 146 (473)
Q Consensus 114 ~~~~pD~Vv~d~~~~--~~~~~A~~~giP~v~~~~ 146 (473)
+..+|+++..+. .+..+|+..|++.+.+.+
T Consensus 228 ---~v~~if~e~~~~~~~~~~la~~~g~~v~~l~p 259 (286)
T 3gi1_A 228 ---NVKTIFAEDNVNPKIAHAIAKSTGAKVKTLSP 259 (286)
T ss_dssp ---TCCEEEECTTSCTHHHHHHHHTTTCEEEECCC
T ss_pred ---CCCEEEEeCCCChHHHHHHHHHhCCeEEEecc
Confidence 899999997655 344789999999988643
No 210
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=33.53 E-value=1.2e+02 Score=26.21 Aligned_cols=45 Identities=16% Similarity=-0.040 Sum_probs=29.8
Q ss_pred hhHHHHHHHHhHhhhcCCCCccEEEECCCcc--hHHHHHHH----hCCceEEEecchH
Q 047833 98 FKPHFKKLVNDLIDEQNGYKPLCIITDMFFG--WCKEIAQE----YGIFHAIFIGGGG 149 (473)
Q Consensus 98 ~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~--~~~~~A~~----~giP~v~~~~~~~ 149 (473)
..+.+..+.++| +||++|.-+--. .|...|+. .|+|+|+++-.|.
T Consensus 52 ~~~~~~~~~~~~-------~pDfvI~isPN~a~PGP~~ARE~l~~~~iP~IvI~D~p~ 102 (283)
T 1qv9_A 52 AVEMALDIAEDF-------EPDFIVYGGPNPAAPGPSKAREMLADSEYPAVIIGDAPG 102 (283)
T ss_dssp HHHHHHHHHHHH-------CCSEEEEECSCTTSHHHHHHHHHHHTSSSCEEEEEEGGG
T ss_pred HHHHhhhhhhhc-------CCCEEEEECCCCCCCCchHHHHHHHhCCCCEEEEcCCcc
Confidence 333444555899 999988764433 45555544 5999999987654
No 211
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=32.84 E-value=22 Score=33.28 Aligned_cols=26 Identities=19% Similarity=0.295 Sum_probs=21.4
Q ss_pred cceeEeccCcchHHHHHhh----CCcEEec
Q 047833 351 VSVFLSHCGWNSVLEALSH----GVPIIGW 376 (473)
Q Consensus 351 v~~~I~HGG~gt~~eal~~----GvP~l~~ 376 (473)
++++|+=||-||++.|.+. ++|++.+
T Consensus 109 ~DlvI~lGGDGT~L~aa~~~~~~~~PvlGi 138 (365)
T 3pfn_A 109 IDFIICLGGDGTLLYASSLFQGSVPPVMAF 138 (365)
T ss_dssp CSEEEEESSTTHHHHHHHHCSSSCCCEEEE
T ss_pred CCEEEEEcChHHHHHHHHHhccCCCCEEEE
Confidence 3469999999999999873 5788776
No 212
>4hps_A Pyrrolidone-carboxylate peptidase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, hydrolase; 1.55A {Xenorhabdus bovienii} PDB: 4gxh_A
Probab=32.67 E-value=65 Score=27.76 Aligned_cols=28 Identities=25% Similarity=0.240 Sum_probs=22.3
Q ss_pred CCcEEEEEcCCCcc--CHHHHHHHHHHHHh
Q 047833 4 RKETIVLFPFMAQG--HIIPFLALALHLEK 31 (473)
Q Consensus 4 ~~~~il~~~~~~~G--H~~p~l~La~~L~~ 31 (473)
+|++||+..|+-+| -+||...++++|.+
T Consensus 22 ~mk~VLvTGF~PF~g~~~NPS~~~v~~L~~ 51 (228)
T 4hps_A 22 SMKTILVTAFDPFGGEAINPSWEAIKPLQG 51 (228)
T ss_dssp CCEEEEEEEECCCTTCSCCHHHHHHGGGTT
T ss_pred CCCEEEEEeccCCCCCCCChHHHHHHHhcC
Confidence 46789988876443 47999999999987
No 213
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=32.43 E-value=33 Score=30.33 Aligned_cols=45 Identities=16% Similarity=0.089 Sum_probs=37.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHH--------HHhCC-CcEEEEEcCCcchhhh
Q 047833 4 RKETIVLFPFMAQGHIIPFLALALH--------LEKTN-KYTITFVNTPLNLRKL 49 (473)
Q Consensus 4 ~~~~il~~~~~~~GH~~p~l~La~~--------L~~~r-Gh~Vt~~~~~~~~~~v 49 (473)
.+.+|++.+.++-.|-....-++.. |+. + |++|+..+.....+.+
T Consensus 119 ~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~-~~G~eVi~LG~~vp~e~i 172 (262)
T 1xrs_B 119 RKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLER-YEMIDAYNLGSQVANEDF 172 (262)
T ss_dssp SCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGG-CTTEEEEECCSSBCHHHH
T ss_pred CCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHh-cCCcEEEECCCCCCHHHH
Confidence 3568999999999999999999987 999 9 9999999876554433
No 214
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=32.36 E-value=21 Score=32.49 Aligned_cols=28 Identities=25% Similarity=0.389 Sum_probs=23.8
Q ss_pred cceeEeccCcchHHHHHhh----CCcEEeccc
Q 047833 351 VSVFLSHCGWNSVLEALSH----GVPIIGWPL 378 (473)
Q Consensus 351 v~~~I~HGG~gt~~eal~~----GvP~l~~P~ 378 (473)
++++|.-||-||+.+++.. ++|++.++.
T Consensus 76 ~d~vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 76 CELVLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp CCCEEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CCEEEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 3469999999999999865 899999874
No 215
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=32.29 E-value=68 Score=25.87 Aligned_cols=49 Identities=16% Similarity=0.094 Sum_probs=36.4
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhc
Q 047833 1 MAQRKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLRKLKS 51 (473)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v~~ 51 (473)
|++++. .+++..++.--++|.+-||..-++ -|++|+++-+-.-...+.+
T Consensus 2 m~~~kl-~II~~sG~~dka~~a~ilA~~AaA-~G~eV~iFfTf~Gl~~l~K 50 (160)
T 3pnx_A 2 MENKKM-NLLLFSGDYDKALASLIIANAARE-MEIEVTIFCAFWGLLLLRD 50 (160)
T ss_dssp CTTCEE-EEEECCCCHHHHHHHHHHHHHHHH-TTCEEEEEECGGGGGGGBC
T ss_pred CCCCcE-EEEEecCCHHHHHHHHHHHHHHHH-cCCCEEEEEeehhHHHhcc
Confidence 454433 345555677889999999999999 9999999987665555554
No 216
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=32.11 E-value=1.4e+02 Score=26.24 Aligned_cols=34 Identities=15% Similarity=0.161 Sum_probs=25.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 7 TIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 7 ~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
|+++++.++.| =-.++|+.|.+ +|++|.++.-..
T Consensus 10 k~vlVTGas~G---IG~aia~~l~~-~G~~V~~~~r~~ 43 (285)
T 3sc4_A 10 KTMFISGGSRG---IGLAIAKRVAA-DGANVALVAKSA 43 (285)
T ss_dssp CEEEEESCSSH---HHHHHHHHHHT-TTCEEEEEESCC
T ss_pred CEEEEECCCCH---HHHHHHHHHHH-CCCEEEEEECCh
Confidence 57777776654 34588999999 999999887443
No 217
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=32.08 E-value=52 Score=29.01 Aligned_cols=43 Identities=16% Similarity=-0.035 Sum_probs=28.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhh
Q 047833 3 QRKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLRK 48 (473)
Q Consensus 3 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~ 48 (473)
++++|||+.-=-+. |---+.+|+++|++ +|+|+++.|...+.-
T Consensus 9 ~~~m~ILlTNDDGi-~apGi~aL~~~l~~--~~~V~VVAP~~~~Sg 51 (261)
T 3ty2_A 9 TPKLRLLLSNDDGV-YAKGLAILAKTLAD--LGEVDVVAPDRNRSG 51 (261)
T ss_dssp --CCEEEEECSSCT-TCHHHHHHHHHHTT--TSEEEEEEESSCCTT
T ss_pred CCCCeEEEEcCCCC-CCHHHHHHHHHHHh--cCCEEEEecCCCCcC
Confidence 45688888764332 33346677888866 789999998886543
No 218
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=31.68 E-value=44 Score=29.79 Aligned_cols=39 Identities=10% Similarity=0.100 Sum_probs=30.5
Q ss_pred CcEEEEEcC--CCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 5 KETIVLFPF--MAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 5 ~~~il~~~~--~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
|++++.+.. |+.|--.-...||..|++ +|++|.++=...
T Consensus 3 M~kvI~v~s~KGGvGKTT~a~nLA~~La~-~G~~VlliD~D~ 43 (286)
T 2xj4_A 3 ETRVIVVGNEKGGAGKSTIAVHLVTALLY-GGAKVAVIDLDL 43 (286)
T ss_dssp -CEEEEECCSSSCTTHHHHHHHHHHHHHH-TTCCEEEEECCT
T ss_pred CCeEEEEEcCCCCCCHHHHHHHHHHHHHH-CCCcEEEEECCC
Confidence 555554443 688999999999999999 999999986554
No 219
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=31.67 E-value=2.8e+02 Score=24.76 Aligned_cols=106 Identities=7% Similarity=0.016 Sum_probs=62.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC-CCcEEEEEcCCc--chhhhhccCCCCCCceEEecCCCCCCCCCCCCCCC
Q 047833 3 QRKETIVLFPFMAQGHIIPFLALALHLEKT-NKYTITFVNTPL--NLRKLKSSVPQNSSINLLEIPFDSIDHNLPPCTEN 79 (473)
Q Consensus 3 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~-rGh~Vt~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 79 (473)
.+++||+++.++. || -+-+|..+.++- -..+|..+.... .....++ .++.+..+|.. . .
T Consensus 93 ~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~-----~gIp~~~~~~~-----~-~---- 154 (292)
T 3lou_A 93 AARPKVLIMVSKL-EH--CLADLLFRWKMGELKMDIVGIVSNHPDFAPLAAQ-----HGLPFRHFPIT-----A-D---- 154 (292)
T ss_dssp TSCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSSTTHHHHHH-----TTCCEEECCCC-----S-S----
T ss_pred CCCCEEEEEEcCC-Cc--CHHHHHHHHHcCCCCcEEEEEEeCcHHHHHHHHH-----cCCCEEEeCCC-----c-C----
Confidence 3467898777655 54 345555555441 245777665332 3344445 67778776621 0 0
Q ss_pred CCCCChhhHHHHHHHHHhhhHHHHHHHHhHhhhcCCCCccEEEECCCcc-hHHHHHHHhCCceEEEecc
Q 047833 80 TDSVPYHLVSKLIEATLSFKPHFKKLVNDLIDEQNGYKPLCIITDMFFG-WCKEIAQEYGIFHAIFIGG 147 (473)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~-~~~~~A~~~giP~v~~~~~ 147 (473)
.. ....+.+.+++++. +||+||.-.+.. -...+-+...-.++.++++
T Consensus 155 ----~r----------~~~~~~~~~~l~~~-------~~Dlivla~y~~il~~~~l~~~~~~~iNiHpS 202 (292)
T 3lou_A 155 ----TK----------AQQEAQWLDVFETS-------GAELVILARYMQVLSPEASARLANRAINIHHS 202 (292)
T ss_dssp ----CH----------HHHHHHHHHHHHHH-------TCSEEEESSCCSCCCHHHHHHTTTSEEEEEEE
T ss_pred ----CH----------HHHHHHHHHHHHHh-------CCCEEEecCchhhCCHHHHhhhcCCeEEeCCC
Confidence 00 11234567888888 999999986643 3345556666677887664
No 220
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=31.46 E-value=35 Score=33.47 Aligned_cols=35 Identities=29% Similarity=0.274 Sum_probs=28.2
Q ss_pred HHHHHHHhHhhhcCCCCccEEEECCCcchHHHHHHHhCCceEEEe
Q 047833 101 HFKKLVNDLIDEQNGYKPLCIITDMFFGWCKEIAQEYGIFHAIFI 145 (473)
Q Consensus 101 ~~~~~l~~~~~~~~~~~pD~Vv~d~~~~~~~~~A~~~giP~v~~~ 145 (473)
.+.+++++. +||++|.... ...+|+++|||++.+.
T Consensus 408 el~~~i~~~-------~pDL~ig~~~---~~~ia~k~gIP~~~~~ 442 (492)
T 3u7q_A 408 EFEEFVKRI-------KPDLIGSGIK---EKFIFQKMGIPFREMH 442 (492)
T ss_dssp HHHHHHHHH-------CCSEEEECHH---HHHHHHHTTCCEEESS
T ss_pred HHHHHHHhc-------CCcEEEeCcc---hhHHHHHcCCCEEecc
Confidence 456777787 9999999843 5789999999999753
No 221
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=31.30 E-value=42 Score=28.90 Aligned_cols=41 Identities=12% Similarity=0.224 Sum_probs=30.7
Q ss_pred hHHHHHHHHhHhhhcCCCCccEEEECCCcchHHHHHHHhCCceEEEec
Q 047833 99 KPHFKKLVNDLIDEQNGYKPLCIITDMFFGWCKEIAQEYGIFHAIFIG 146 (473)
Q Consensus 99 ~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~~~~~~A~~~giP~v~~~~ 146 (473)
.+.+.+.+++..+. +.|+||.+.. ...+|+++|+|.+.+.+
T Consensus 140 ~ee~~~~i~~l~~~----G~~vVVG~~~---~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 140 EEDARGQINELKAN----GTEAVVGAGL---ITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHHHHHHHT----TCCEEEESHH---HHHHHHHTTSEEEESSC
T ss_pred HHHHHHHHHHHHHC----CCCEEECCHH---HHHHHHHcCCcEEEECC
Confidence 34555555555443 7999999954 57899999999999874
No 222
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=31.11 E-value=73 Score=32.42 Aligned_cols=42 Identities=17% Similarity=-0.001 Sum_probs=27.4
Q ss_pred HHHHHHHhHhhhcCCCCccEEEECCCcc-hHHHHHHHhCCceEEEecchH
Q 047833 101 HFKKLVNDLIDEQNGYKPLCIITDMFFG-WCKEIAQEYGIFHAIFIGGGG 149 (473)
Q Consensus 101 ~~~~~l~~~~~~~~~~~pD~Vv~d~~~~-~~~~~A~~~giP~v~~~~~~~ 149 (473)
.+.+.++++ +||+||+-.+.. -...+-+.....++.++++-.
T Consensus 66 ~~~~~l~~~-------~~d~iv~~~~~~il~~~~l~~~~~~~iNiH~slL 108 (660)
T 1z7e_A 66 LWVERIAQL-------SPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLL 108 (660)
T ss_dssp HHHHHHHHH-------CCSEEEEESCCSCCCHHHHTTCTTCEEEEESSST
T ss_pred HHHHHHHhc-------CCCEEEEcCcccccCHHHHhcCCCCeEEecCCcC
Confidence 345677888 899999876533 233444555566788887643
No 223
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=31.03 E-value=35 Score=31.51 Aligned_cols=33 Identities=18% Similarity=0.182 Sum_probs=26.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTP 43 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~ 43 (473)
++||.++..|..|. .+|..|.+ .||+|+++...
T Consensus 4 ~mki~iiG~G~~G~-----~~a~~L~~-~g~~V~~~~r~ 36 (359)
T 1bg6_A 4 SKTYAVLGLGNGGH-----AFAAYLAL-KGQSVLAWDID 36 (359)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHHH-TTCEEEEECSC
T ss_pred cCeEEEECCCHHHH-----HHHHHHHh-CCCEEEEEeCC
Confidence 46899998776663 47888999 99999998654
No 224
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=31.02 E-value=83 Score=27.64 Aligned_cols=41 Identities=12% Similarity=-0.102 Sum_probs=31.1
Q ss_pred hHHHHHHHHhHhhhcCCCCccEEEECCCcc------hHHHHHHHhCCceEEEec
Q 047833 99 KPHFKKLVNDLIDEQNGYKPLCIITDMFFG------WCKEIAQEYGIFHAIFIG 146 (473)
Q Consensus 99 ~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~------~~~~~A~~~giP~v~~~~ 146 (473)
...+.+++++. +||+|++..-+. .+..+|..+|+|.++...
T Consensus 105 A~~La~~i~~~-------~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~ 151 (255)
T 1efv_B 105 ARVLAKLAEKE-------KVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFAS 151 (255)
T ss_dssp HHHHHHHHHHH-------TCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHHhc-------CCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceE
Confidence 34456667776 899999986553 477999999999998643
No 225
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=30.90 E-value=81 Score=23.79 Aligned_cols=42 Identities=10% Similarity=0.088 Sum_probs=0.0
Q ss_pred HHHHHHHHhHhhhcCCCCccEEEECCCcc--hHHHHHHHh-------CCceEEEecch
Q 047833 100 PHFKKLVNDLIDEQNGYKPLCIITDMFFG--WCKEIAQEY-------GIFHAIFIGGG 148 (473)
Q Consensus 100 ~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~--~~~~~A~~~-------giP~v~~~~~~ 148 (473)
....+.+++. +||+||.|...+ .+..+.+.+ .+|.+.++...
T Consensus 38 ~~al~~~~~~-------~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~ 88 (136)
T 3t6k_A 38 EEALQQIYKN-------LPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQG 88 (136)
T ss_dssp HHHHHHHHHS-------CCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTT
T ss_pred HHHHHHHHhC-------CCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCC
No 226
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=30.87 E-value=29 Score=27.07 Aligned_cols=35 Identities=14% Similarity=0.155 Sum_probs=27.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcc
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLN 45 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~ 45 (473)
+.||+++..|..| ..+|+.|.+ .||+|+++.....
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~-~g~~v~vid~~~~ 41 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLA-SDIPLVVIETSRT 41 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHH-TTCCEEEEESCHH
T ss_pred CCCEEEECcCHHH-----HHHHHHHHH-CCCCEEEEECCHH
Confidence 4578888776544 478999999 9999999976554
No 227
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=30.81 E-value=55 Score=31.91 Aligned_cols=47 Identities=19% Similarity=0.232 Sum_probs=32.7
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhccCCCCCCceEEecCCCCCCCCCCC
Q 047833 18 HIIPFLALALHLEKTNKYTITFVNTPLNLRKLKSSVPQNSSINLLEIPFDSIDHNLPP 75 (473)
Q Consensus 18 H~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~ 75 (473)
|=.-++.+|+.|.+ .|+++. ++......+++ .|+.+..+. +..++|+
T Consensus 33 DK~glv~~Ak~L~~-lGfeI~--ATgGTak~L~e-----~GI~v~~V~---kvTgfPE 79 (534)
T 4ehi_A 33 DKEGIVEFGKELEN-LGFEIL--STGGTFKLLKE-----NGIKVIEVS---DFTKSPE 79 (534)
T ss_dssp SCTTHHHHHHHHHH-TTCEEE--ECHHHHHHHHH-----TTCCCEECB---CCC----
T ss_pred ccccHHHHHHHHHH-CCCEEE--EccHHHHHHHH-----CCCceeehh---hccCCch
Confidence 45568899999999 999886 56777788888 667777666 3345554
No 228
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=30.64 E-value=40 Score=30.32 Aligned_cols=34 Identities=18% Similarity=0.256 Sum_probs=27.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 047833 4 RKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTP 43 (473)
Q Consensus 4 ~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~ 43 (473)
+|+||.|+-.|..|. .+|..|.+ .||+|+++...
T Consensus 2 ~m~~I~iiG~G~mG~-----~~a~~l~~-~G~~V~~~d~~ 35 (302)
T 2h78_A 2 HMKQIAFIGLGHMGA-----PMATNLLK-AGYLLNVFDLV 35 (302)
T ss_dssp -CCEEEEECCSTTHH-----HHHHHHHH-TTCEEEEECSS
T ss_pred CCCEEEEEeecHHHH-----HHHHHHHh-CCCeEEEEcCC
Confidence 567999998887774 67899999 99999998544
No 229
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=30.56 E-value=58 Score=27.96 Aligned_cols=42 Identities=19% Similarity=-0.005 Sum_probs=29.4
Q ss_pred hHHHHHHHHhHhhhcCCCCccEEEECCCcch-------HHHHHHHhCCceEEEe
Q 047833 99 KPHFKKLVNDLIDEQNGYKPLCIITDMFFGW-------CKEIAQEYGIFHAIFI 145 (473)
Q Consensus 99 ~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~~-------~~~~A~~~giP~v~~~ 145 (473)
.+.+.++++.+.. +||+|++|..... |..+...+++|+|-+.
T Consensus 90 ~P~~l~al~~L~~-----~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVA 138 (225)
T 2w36_A 90 GPLFLKAWEKLRT-----KPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVA 138 (225)
T ss_dssp HHHHHHHHTTCCS-----CCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEE
T ss_pred hHHHHHHHHhcCC-----CCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEE
Confidence 3445566666532 6999999965443 4467788899999974
No 230
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=30.44 E-value=40 Score=31.69 Aligned_cols=35 Identities=17% Similarity=0.131 Sum_probs=27.6
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEc
Q 047833 1 MAQRKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVN 41 (473)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~ 41 (473)
|+..+.+|+|+-.|-. -+.+|..|++ +|++|+++=
T Consensus 1 M~~~~~~V~IVGaG~a-----Gl~~A~~L~~-~G~~v~v~E 35 (397)
T 2vou_A 1 MSPTTDRIAVVGGSIS-----GLTAALMLRD-AGVDVDVYE 35 (397)
T ss_dssp -CCCCSEEEEECCSHH-----HHHHHHHHHH-TTCEEEEEC
T ss_pred CCCCCCcEEEECCCHH-----HHHHHHHHHh-CCCCEEEEe
Confidence 6656678999887733 4788999999 999999984
No 231
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=30.44 E-value=43 Score=30.02 Aligned_cols=40 Identities=13% Similarity=0.072 Sum_probs=24.4
Q ss_pred CCCCCcEEEEEcCCCccCHHH-HHHHHHHHHhCCCcEEEEEc
Q 047833 1 MAQRKETIVLFPFMAQGHIIP-FLALALHLEKTNKYTITFVN 41 (473)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~p-~l~La~~L~~~rGh~Vt~~~ 41 (473)
|+.+|.|++++..+..++... .-.+.+.|.+ +|++|.+..
T Consensus 1 m~~~mkki~ii~np~~~~~~~~~~~i~~~l~~-~g~~v~~~~ 41 (292)
T 2an1_A 1 MNNHFKCIGIVGHPRHPTALTTHEMLYRWLCD-QGYEVIVEQ 41 (292)
T ss_dssp ---CCCEEEEECC-------CHHHHHHHHHHH-TTCEEEEEH
T ss_pred CCCcCcEEEEEEcCCCHHHHHHHHHHHHHHHH-CCCEEEEec
Confidence 666678999998887666554 5568889999 999988753
No 232
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=30.26 E-value=30 Score=31.24 Aligned_cols=36 Identities=6% Similarity=-0.085 Sum_probs=27.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 3 QRKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 3 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
.+++||.|+-.|..| ..+|..|.+ .||+|+++....
T Consensus 5 ~~~~~I~iIG~G~mG-----~~~a~~l~~-~G~~V~~~dr~~ 40 (303)
T 3g0o_A 5 GTDFHVGIVGLGSMG-----MGAARSCLR-AGLSTWGADLNP 40 (303)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHH-TTCEEEEECSCH
T ss_pred CCCCeEEEECCCHHH-----HHHHHHHHH-CCCeEEEEECCH
Confidence 346789999877666 468999999 999999986443
No 233
>2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A
Probab=30.05 E-value=2.5e+02 Score=23.59 Aligned_cols=80 Identities=11% Similarity=0.212 Sum_probs=0.0
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhccCCCCCCceEEecCCCCCCCCCCCCCCCC
Q 047833 1 MAQRKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLRKLKSSVPQNSSINLLEIPFDSIDHNLPPCTENT 80 (473)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 80 (473)
|+..+.+|+++- .|-.-.-.|...|.+ .|++|..+.... +.
T Consensus 1 M~~m~~~ILivd----d~~~~~~~l~~~L~~-~g~~v~~~~~~~-----~a----------------------------- 41 (238)
T 2gwr_A 1 MDTMRQRILVVD----DDASLAEMLTIVLRG-EGFDTAVIGDGT-----QA----------------------------- 41 (238)
T ss_dssp -CCCCCEEEEEC----SCHHHHHHHHHHHHH-TTCEEEEECCGG-----GH-----------------------------
T ss_pred CCcccCeEEEEe----CCHHHHHHHHHHHHH-CCCEEEEECCHH-----HH-----------------------------
Q ss_pred CCCChhhHHHHHHHHHhhhHHHHHHHHhHhhhcCCCCccEEEECCCcc--hHHHHHHHh----CCceEEEecch
Q 047833 81 DSVPYHLVSKLIEATLSFKPHFKKLVNDLIDEQNGYKPLCIITDMFFG--WCKEIAQEY----GIFHAIFIGGG 148 (473)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~--~~~~~A~~~----giP~v~~~~~~ 148 (473)
.+.+++. +||+||.|...+ .+..+++.+ ++|++.++...
T Consensus 42 ----------------------l~~l~~~-------~~dlvilD~~l~~~~g~~~~~~lr~~~~~~ii~lt~~~ 86 (238)
T 2gwr_A 42 ----------------------LTAVREL-------RPDLVLLDLMLPGMNGIDVCRVLRADSGVPIVMLTAKT 86 (238)
T ss_dssp ----------------------HHHHHHH-------CCSEEEEESSCSSSCHHHHHHHHHTTCCCCEEEEEETT
T ss_pred ----------------------HHHHHhC-------CCCEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEEeCCC
No 234
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=30.02 E-value=25 Score=27.10 Aligned_cols=35 Identities=9% Similarity=0.089 Sum_probs=24.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 4 RKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 4 ~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
++.+|+++..|..| ..+++.|.+ .||+|+++....
T Consensus 5 ~~~~v~I~G~G~iG-----~~~a~~l~~-~g~~v~~~d~~~ 39 (144)
T 2hmt_A 5 KNKQFAVIGLGRFG-----GSIVKELHR-MGHEVLAVDINE 39 (144)
T ss_dssp -CCSEEEECCSHHH-----HHHHHHHHH-TTCCCEEEESCH
T ss_pred cCCcEEEECCCHHH-----HHHHHHHHH-CCCEEEEEeCCH
Confidence 34578887654333 467899999 999999886543
No 235
>2wam_A RV2714, conserved hypothetical alanine and leucine rich protein; unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=29.90 E-value=3.3e+02 Score=25.06 Aligned_cols=181 Identities=12% Similarity=0.056 Sum_probs=88.5
Q ss_pred CeEEEEeeCCcccCC-HHHHHHHHHHHHhCCCceEEEECCCCCCCccccccccCCcEEEecccChHHhhccCCc--ceeE
Q 047833 279 TSVLYVSFGSQNTIA-TSQMMQLAMALEASGKNFIWVVRPPIGFDINSEIKCSGQGLVVHKWAPQVEILSHRSV--SVFL 355 (473)
Q Consensus 279 ~~~V~vs~GS~~~~~-~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~v--~~~I 355 (473)
++++++ .|-..... .++...+++.+++.+.+-|+.++.- +.+...+.|-.|..... ..+++....+ .-+-
T Consensus 142 ~~~LlL-~G~eP~~~w~~fa~~vl~~a~~~gV~~vvtLggl----p~~vphtRp~~V~~~at--~~el~~~~~~~~~~~~ 214 (351)
T 2wam_A 142 TPFLLL-AGLEPDLKWERFITAVRLLAERLGVRQTIGLGTV----PMAVPHTRPITMTAHSN--NRELISDFQPSISEIQ 214 (351)
T ss_dssp CEEEEE-EEECCSBCHHHHHHHHHHHHHHTTCCEEEEEEEE----EESCCTTSCCCEEEEES--SGGGGTTSCCCCCSEE
T ss_pred CcEEEE-ECCCChhHHHHHHHHHHHHHHHhCCCEEEEEecc----cCCCCCccCcceEEEEC--CHHHHHhcCCccCccc
Confidence 444444 35544444 4777788899999999998888521 10111223433443222 2233322111 0122
Q ss_pred eccCcchHH--HHHhhCCcEEec----ccccc---chhhHHH----HHHhhcceEEEecCCCCccCHHHHHHHHHHHHcC
Q 047833 356 SHCGWNSVL--EALSHGVPIIGW----PLAAE---QFYNSKL----LEEEIGVCVEVARGKSSEVLKKDIAAKIELVMNE 422 (473)
Q Consensus 356 ~HGG~gt~~--eal~~GvP~l~~----P~~~D---Q~~nA~~----v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~~ 422 (473)
.-+|..++. +|...|.|.+++ |...= -|.=|.. +.+.+|+-+-+.. -.-.++++.+.|.++.++
T Consensus 215 gp~GisglL~~~~~~~Gi~a~~l~~~vP~Yla~~pdP~AA~alL~~L~~llgl~ip~~~---L~e~Ae~ie~~i~el~~~ 291 (351)
T 2wam_A 215 VPGSASNLLEYRMAQHGHEVVGFTVHVPHYLTQTDYPAAAQALLEQVAKTGSLQLPLAV---LAEAAAEVQAKIDEQVQA 291 (351)
T ss_dssp EECCHHHHHHHHHHHTTCCEEEEEEEEEGGGTTSCCHHHHHHHHHHHHHHHTCCCCCHH---HHHHHHHHHHHHHHHHTT
T ss_pred ccccHHHHHHHHHHHcCCCEEEEEEeCCccccCCCCHHHHHHHHHHHHHHHCCCCCHHH---HHHHHHHHHHHHHHHHHh
Confidence 234444444 667889998875 65422 2333333 3344454444433 344457788889999986
Q ss_pred ChhhHHHHHHHHHHHHHHHHhc-----ccccccCCcHHHHHHHHHHHHHhhh
Q 047833 423 TEKGIELRKNAYEVREIIKNAF-----KNEENFQGSSVKAMNQFLNAASMVK 469 (473)
Q Consensus 423 ~~~~~~~~~~a~~l~~~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~~~ 469 (473)
..+..+|-+..++=.+....+- --++.+-=+...-..+|.++|++..
T Consensus 292 ~~e~~~~V~~LE~qyD~~~~~~~~~~l~~~~~~~ps~dei~~efErfL~~~~ 343 (351)
T 2wam_A 292 SAEVAQVVAALERQYDAFIDAQENRSLLTRDEDLPSGDELGAEFERFLAQQA 343 (351)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTTC-------------CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhhchhhhhcccccccccccCCCCHHHHHHHHHHHHHhcC
Confidence 6444445555544443332210 0000000123455577888887654
No 236
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=29.90 E-value=42 Score=28.84 Aligned_cols=37 Identities=11% Similarity=-0.044 Sum_probs=31.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 7 TIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 7 ~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
||+|..-|+-|=..-...||..|++ +|++|.++=...
T Consensus 2 kI~vs~kGGvGKTt~a~~LA~~la~-~g~~VlliD~D~ 38 (254)
T 3kjh_A 2 KLAVAGKGGVGKTTVAAGLIKIMAS-DYDKIYAVDGDP 38 (254)
T ss_dssp EEEEECSSSHHHHHHHHHHHHHHTT-TCSCEEEEEECT
T ss_pred EEEEecCCCCCHHHHHHHHHHHHHH-CCCeEEEEeCCC
Confidence 6888777888999999999999999 999999986444
No 237
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=29.89 E-value=56 Score=25.47 Aligned_cols=38 Identities=11% Similarity=0.107 Sum_probs=26.1
Q ss_pred cEEEEEcCCCccCHHHHH-HHHHHHHhCCCcEEEEEcCCc
Q 047833 6 ETIVLFPFMAQGHIIPFL-ALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 6 ~~il~~~~~~~GH~~p~l-~La~~L~~~rGh~Vt~~~~~~ 44 (473)
+||+++-+...|+..-+. .|++.|.+ +|++|.++....
T Consensus 2 ~ki~I~y~S~tGnT~~~A~~ia~~l~~-~g~~v~~~~~~~ 40 (148)
T 3f6r_A 2 SKVLIVFGSSTGNTESIAQKLEELIAA-GGHEVTLLNAAD 40 (148)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHT-TTCEEEEEETTT
T ss_pred CeEEEEEECCCchHHHHHHHHHHHHHh-CCCeEEEEehhh
Confidence 466655555577765544 46788888 999999876444
No 238
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=29.79 E-value=31 Score=31.38 Aligned_cols=38 Identities=16% Similarity=0.212 Sum_probs=27.3
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 1 MAQRKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
|+.++.+|+++-.|..| +..|..|++ +|++|+++-...
T Consensus 1 m~~~~~~vvIIG~G~aG-----l~aA~~l~~-~g~~v~lie~~~ 38 (335)
T 2zbw_A 1 MAADHTDVLIVGAGPTG-----LFAGFYVGM-RGLSFRFVDPLP 38 (335)
T ss_dssp --CCEEEEEEECCSHHH-----HHHHHHHHH-TTCCEEEEESSS
T ss_pred CCCCcCcEEEECCCHHH-----HHHHHHHHh-CCCCEEEEeCCC
Confidence 55555688888776443 678889999 999999996443
No 239
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=29.73 E-value=58 Score=30.12 Aligned_cols=41 Identities=15% Similarity=0.107 Sum_probs=34.4
Q ss_pred CCcEEEEEcC-CCccCHHHHHHHHHHHHhCCCcEEEEEcCCcc
Q 047833 4 RKETIVLFPF-MAQGHIIPFLALALHLEKTNKYTITFVNTPLN 45 (473)
Q Consensus 4 ~~~~il~~~~-~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~ 45 (473)
++.+|+|++. |+-|-..-...||..|++ +|++|.++.....
T Consensus 24 ~~~~i~v~sgKGGvGKTTvA~~LA~~lA~-~G~rVLlvD~D~~ 65 (349)
T 3ug7_A 24 DGTKYIMFGGKGGVGKTTMSAATGVYLAE-KGLKVVIVSTDPA 65 (349)
T ss_dssp CSCEEEEEECSSSTTHHHHHHHHHHHHHH-SSCCEEEEECCTT
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHH-CCCeEEEEeCCCC
Confidence 4556765555 788999999999999999 9999999997773
No 240
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=29.69 E-value=41 Score=33.29 Aligned_cols=34 Identities=21% Similarity=0.328 Sum_probs=27.1
Q ss_pred HHHHHHHhHhhhcCCCCccEEEECCCcchHHHHHHHhCCceEEE
Q 047833 101 HFKKLVNDLIDEQNGYKPLCIITDMFFGWCKEIAQEYGIFHAIF 144 (473)
Q Consensus 101 ~~~~~l~~~~~~~~~~~pD~Vv~d~~~~~~~~~A~~~giP~v~~ 144 (473)
.+.+++++. +||++|.+. ....+|+++|||++.+
T Consensus 340 el~~~i~~~-------~pDL~ig~~---~~~~~a~~~giP~~~i 373 (525)
T 3aek_B 340 EVEKAIEAA-------APELILGTQ---MERNIAKKLGLPCAVI 373 (525)
T ss_dssp HHHHHHHHH-------CCSEEEECH---HHHHHHHHHTCCEEEC
T ss_pred HHHHHHhhc-------CCCEEEecc---hhHHHHHHcCCCEEEe
Confidence 345667777 899999985 3678899999999985
No 241
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B
Probab=29.62 E-value=1.8e+02 Score=26.68 Aligned_cols=114 Identities=17% Similarity=0.117 Sum_probs=0.0
Q ss_pred CCCeEEEEeeCCcccCCHHHHHHHHHHHHhCCCceEEEECCCCCCCccccccccCCcEEEecccChHHhhccCCcceeEe
Q 047833 277 PYTSVLYVSFGSQNTIATSQMMQLAMALEASGKNFIWVVRPPIGFDINSEIKCSGQGLVVHKWAPQVEILSHRSVSVFLS 356 (473)
Q Consensus 277 ~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~v~~~I~ 356 (473)
++..++.|+.|++.. ...+..+.|++.+.++=++. ..-+...+.-....++.....-.+|.
T Consensus 215 ~g~dv~iia~Gs~~~----~a~~Aa~~L~~~Gi~v~vv~---------------~~~l~P~d~~~i~~~~~~~~~vv~vE 275 (341)
T 2ozl_B 215 QGTHITVVSHSRPVG----HCLEAAAVLSKEGVECEVIN---------------MRTIRPMDMETIEASVMKTNHLVTVE 275 (341)
T ss_dssp CCSSEEEEECSTHHH----HHHHHHHHHHTTTCCEEEEE---------------CCEEETCCHHHHHHHHHHHSCEEEEC
T ss_pred cCCCEEEEEeCHHHH----HHHHHHHHHHhcCCCeEEEe---------------eeeecCCCHHHHHHHHhcCCeEEEEe
Q ss_pred ----ccCcch-HHHHHhh-------CCcEEeccccccchhhHHHHHHhhcceEEEecCCCCccCHHHHHHHHHHHHc
Q 047833 357 ----HCGWNS-VLEALSH-------GVPIIGWPLAAEQFYNSKLLEEEIGVCVEVARGKSSEVLKKDIAAKIELVMN 421 (473)
Q Consensus 357 ----HGG~gt-~~eal~~-------GvP~l~~P~~~DQ~~nA~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~ 421 (473)
.||+|+ +.+.+.. .+|+..+-....=...+..+++. ..++.+.|.++|+++++
T Consensus 276 e~~~~Gg~g~~v~~~l~~~~~~~~l~~~v~~ig~~d~~~~~g~~l~~~------------~g~~~~~I~~~i~~~l~ 340 (341)
T 2ozl_B 276 GGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDN------------SIPQVKDIIFAIKKTLN 340 (341)
T ss_dssp SSCSTTCHHHHHHHHHHHSTTGGGCSSCCEEECCCSSCCCSSHHHHHT------------TSCCHHHHHHHHHHHHT
T ss_pred cCcccCcHHHHHHHHHHhhhcccccCCCEEEEecCCcCCCCcHHHHHH------------hCcCHHHHHHHHHHHhc
No 242
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=29.57 E-value=39 Score=33.31 Aligned_cols=35 Identities=9% Similarity=0.210 Sum_probs=27.9
Q ss_pred HHHHHHHhHhhhcCCCCccEEEECCCcchHHHHHHHhCCceEEEe
Q 047833 101 HFKKLVNDLIDEQNGYKPLCIITDMFFGWCKEIAQEYGIFHAIFI 145 (473)
Q Consensus 101 ~~~~~l~~~~~~~~~~~pD~Vv~d~~~~~~~~~A~~~giP~v~~~ 145 (473)
.+.+++++. +||++|.+.. ...+|+++|||++.+.
T Consensus 363 el~~~i~~~-------~pDl~ig~~~---~r~~a~k~gip~~~i~ 397 (511)
T 2xdq_B 363 VVGDAIARV-------EPAAIFGTQM---ERHVGKRLNIPCGVIA 397 (511)
T ss_dssp HHHHHHHHH-------CCSEEEECHH---HHHHHHHHTCCEEECS
T ss_pred HHHHHHHhc-------CCCEEEeccc---hHHHHHhcCCCeEecc
Confidence 456677777 8999998843 6678899999999863
No 243
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=29.51 E-value=1.7e+02 Score=21.85 Aligned_cols=49 Identities=4% Similarity=-0.051 Sum_probs=34.1
Q ss_pred hCCcEEeccccccchhhHHHHHHhhcceEEEecCCCCccCHHHHHHHHHHHHcCC
Q 047833 369 HGVPIIGWPLAAEQFYNSKLLEEEIGVCVEVARGKSSEVLKKDIAAKIELVMNET 423 (473)
Q Consensus 369 ~GvP~l~~P~~~DQ~~nA~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~~~ 423 (473)
..+|+|++--..| ......+.+. |+--.+.+ .++.++|.++|++++...
T Consensus 74 ~~~pii~ls~~~~-~~~~~~~~~~-g~~~~l~k----P~~~~~l~~~i~~~~~~~ 122 (142)
T 2qxy_A 74 PDTKVAVLSAYVD-KDLIINSVKA-GAVDYILK----PFRLDYLLERVKKIISST 122 (142)
T ss_dssp TTCEEEEEESCCC-HHHHHHHHHH-TCSCEEES----SCCHHHHHHHHHHHHHC-
T ss_pred CCCCEEEEECCCC-HHHHHHHHHC-CcceeEeC----CCCHHHHHHHHHHHHhhc
Confidence 4688888755444 4444455546 87666665 689999999999998765
No 244
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Probab=29.39 E-value=46 Score=24.26 Aligned_cols=60 Identities=8% Similarity=0.134 Sum_probs=39.9
Q ss_pred CCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhcccccccCCcHHHHHHHHHHHHHhhhhh
Q 047833 404 SSEVLKKDIAAKIELVMNETEKGIELRKNAYEVREIIKNAFKNEENFQGSSVKAMNQFLNAASMVKET 471 (473)
Q Consensus 404 ~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 471 (473)
++.++.++|+..+...+.+. .+ -...-..+.+.++.. ..+|.+....++|+..+......
T Consensus 28 ~G~Is~~EL~~~l~~~~~~~-l~--~~~~~~ev~~~i~~~-----D~d~DG~Idf~EF~~~m~~~~~~ 87 (100)
T 3nxa_A 28 KNKISKSSFREMLQKELNHM-LS--DTGNRKAADKLIQNL-----DANHDGRISFDEYWTLIGGITGP 87 (100)
T ss_dssp TTCBCHHHHHHHHHHHSTTT-TC--SSHHHHHHHHHHHHS-----CCCSSCCBCHHHHHHHHHHHHGG
T ss_pred CCeEcHHHHHHHHHHHcccc-cc--ccccHHHHHHHHHHh-----CCCCCCCCcHHHHHHHHHHHHHH
Confidence 37899999999998876432 00 011223566666655 66666788999999988766543
No 245
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=29.25 E-value=32 Score=33.58 Aligned_cols=35 Identities=11% Similarity=-0.107 Sum_probs=27.6
Q ss_pred HHHHHHHhHhhhcCCCCccEEEECCCcchHHHHHHHhCCceEEEe
Q 047833 101 HFKKLVNDLIDEQNGYKPLCIITDMFFGWCKEIAQEYGIFHAIFI 145 (473)
Q Consensus 101 ~~~~~l~~~~~~~~~~~pD~Vv~d~~~~~~~~~A~~~giP~v~~~ 145 (473)
.+.+++++. +||++|.... ...+|+++|||++.+.
T Consensus 392 el~~~i~~~-------~pDL~ig~~~---~~~~a~k~gIP~~~~~ 426 (483)
T 3pdi_A 392 VLLKTVDEY-------QADILIAGGR---NMYTALKGRVPFLDIN 426 (483)
T ss_dssp HHHHHHHHT-------TCSEEECCGG---GHHHHHHTTCCBCCCC
T ss_pred HHHHHHHhc-------CCCEEEECCc---hhHHHHHcCCCEEEec
Confidence 446667777 9999999854 5688999999998753
No 246
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=29.20 E-value=1.4e+02 Score=25.31 Aligned_cols=44 Identities=16% Similarity=0.143 Sum_probs=28.5
Q ss_pred EEEecccCh-HH-hhccCCcceeEeccCcchHHHHHh---------hCCcEEeccc
Q 047833 334 LVVHKWAPQ-VE-ILSHRSVSVFLSHCGWNSVLEALS---------HGVPIIGWPL 378 (473)
Q Consensus 334 v~~~~~vp~-~~-ll~~~~v~~~I~HGG~gt~~eal~---------~GvP~l~~P~ 378 (473)
+.+....+. .. +...++. .+|--||.||+-|..- +++|++++-.
T Consensus 93 ~~~~~~f~~Rk~~~~~~sda-~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 93 VRAVADMHQRKAEMAKHSDA-FIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp EEEESSHHHHHHHHHHTCSE-EEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred eeecCCHHHHHHHHHHhCCE-EEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 344455552 23 3334443 6788999999988762 4899998865
No 247
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=29.11 E-value=45 Score=29.89 Aligned_cols=38 Identities=8% Similarity=0.036 Sum_probs=27.7
Q ss_pred cEEEEEcCCCccC---HHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 6 ETIVLFPFMAQGH---IIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 6 ~~il~~~~~~~GH---~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
+||+++..+.... ......++++|++ +||+|.++.+..
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~-~G~~v~~~d~~~ 42 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQR-RGYELHYMEMGD 42 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHH-TTCEEEEECGGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHH-CCCEEEEEchhH
Confidence 5898888764221 2334679999999 999999997543
No 248
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=28.85 E-value=73 Score=29.02 Aligned_cols=25 Identities=0% Similarity=-0.065 Sum_probs=20.1
Q ss_pred CCHHHHHHHHHHHHhCCCceEEEEC
Q 047833 292 IATSQMMQLAMALEASGKNFIWVVR 316 (473)
Q Consensus 292 ~~~~~~~~~~~al~~~~~~~i~~~~ 316 (473)
.....+..+.+.+.+.+..+++-.+
T Consensus 155 l~d~~~~p~~~~~~e~~lpv~iH~~ 179 (334)
T 2hbv_A 155 LDDATLEAFLTHCANEDIPILVHPW 179 (334)
T ss_dssp TTSHHHHHHHHHHHHTTCCEEEECC
T ss_pred CCcHHHHHHHHHHHHCCCEEEECCC
Confidence 4557788899999999988887765
No 249
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=28.85 E-value=10 Score=19.47 Aligned_cols=18 Identities=33% Similarity=0.563 Sum_probs=14.7
Q ss_pred CcchHHHHHhhCCcEEec
Q 047833 359 GWNSVLEALSHGVPIIGW 376 (473)
Q Consensus 359 G~gt~~eal~~GvP~l~~ 376 (473)
|.|++.-.+..|.|.++-
T Consensus 1 giGa~LKVLa~~LP~liS 18 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPALIS 18 (26)
T ss_pred CchHHHHHHHccchHHHH
Confidence 678888999999987653
No 250
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=28.84 E-value=36 Score=26.03 Aligned_cols=34 Identities=18% Similarity=0.230 Sum_probs=24.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
.++|+++.. |.+- ..+|+.|.+ .||+|+++....
T Consensus 4 ~m~i~IiG~---G~iG--~~~a~~L~~-~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGI---GRVG--YTLAKSLSE-KGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECC---SHHH--HHHHHHHHH-TTCEEEEEESCH
T ss_pred CCEEEEECC---CHHH--HHHHHHHHh-CCCeEEEEECCH
Confidence 357888744 5443 367899999 999999987543
No 251
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=28.81 E-value=39 Score=30.35 Aligned_cols=34 Identities=18% Similarity=0.155 Sum_probs=26.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
|+||.++..|..| ..+|..|.+ .||+|+++....
T Consensus 3 ~m~i~iiG~G~~G-----~~~a~~l~~-~g~~V~~~~r~~ 36 (316)
T 2ew2_A 3 AMKIAIAGAGAMG-----SRLGIMLHQ-GGNDVTLIDQWP 36 (316)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHH-TTCEEEEECSCH
T ss_pred CCeEEEECcCHHH-----HHHHHHHHh-CCCcEEEEECCH
Confidence 4689999877666 467899999 999999987543
No 252
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=28.78 E-value=64 Score=28.07 Aligned_cols=42 Identities=14% Similarity=-0.082 Sum_probs=29.2
Q ss_pred hHHHHHHHHhHhhhcCCCCccEEEECCCcc-------hHHHHHHHhCCceEEEe
Q 047833 99 KPHFKKLVNDLIDEQNGYKPLCIITDMFFG-------WCKEIAQEYGIFHAIFI 145 (473)
Q Consensus 99 ~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~-------~~~~~A~~~giP~v~~~ 145 (473)
.+.+.++++.+.. +||++++|.... -|..+.-.+++|+|-+.
T Consensus 96 ~P~ll~al~~L~~-----~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVA 144 (246)
T 3ga2_A 96 LPLIIEAAKKLET-----EPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIA 144 (246)
T ss_dssp HHHHHHHHHHCSS-----CCSCEEEEBCSSSSTTSCCHHHHHHHHHTSCEEEEE
T ss_pred HHHHHHHHHhcCC-----CCCEEEEcCcEEecCCCcchhheeeeecCCCEEeee
Confidence 3455566666532 799999995433 24578888999999973
No 253
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=28.77 E-value=46 Score=30.11 Aligned_cols=33 Identities=18% Similarity=0.281 Sum_probs=27.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 047833 4 RKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNT 42 (473)
Q Consensus 4 ~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~ 42 (473)
.|.||.|+-.|..|. ++|+.|.+ .||+|++.--
T Consensus 2 ~M~kIgfIGlG~MG~-----~mA~~L~~-~G~~v~v~dr 34 (300)
T 3obb_A 2 HMKQIAFIGLGHMGA-----PMATNLLK-AGYLLNVFDL 34 (300)
T ss_dssp -CCEEEEECCSTTHH-----HHHHHHHH-TTCEEEEECS
T ss_pred CcCEEEEeeehHHHH-----HHHHHHHh-CCCeEEEEcC
Confidence 466999999998884 78999999 9999999753
No 254
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=28.74 E-value=79 Score=24.22 Aligned_cols=37 Identities=5% Similarity=-0.229 Sum_probs=27.1
Q ss_pred EEEcCCCcc--CHHHHHHHHHHHHhCCCcEE-EEEcCCcch
Q 047833 9 VLFPFMAQG--HIIPFLALALHLEKTNKYTI-TFVNTPLNL 46 (473)
Q Consensus 9 l~~~~~~~G--H~~p~l~La~~L~~~rGh~V-t~~~~~~~~ 46 (473)
+++..+..| .....+.+|.++.+ .||+| .++-...-.
T Consensus 5 iiv~~~p~~~~~~~~al~~a~a~~~-~g~~v~~vff~~dGV 44 (130)
T 2hy5_A 5 LQINEGPYQHQASDSAYQFAKAALE-KGHEIFRVFFYHDGV 44 (130)
T ss_dssp EEECSCTTTSTHHHHHHHHHHHHHH-TTCEEEEEEECGGGG
T ss_pred EEEeCCCCCcHHHHHHHHHHHHHHh-cCCeeCEEEEechHH
Confidence 455555554 35667899999999 99999 888766543
No 255
>3giu_A Pyrrolidone-carboxylate peptidase; IDP00836, hydrolase, PROT thiol protease, structural genomics; HET: MSE PG4; 1.25A {Staphylococcus aureus subsp} SCOP: c.56.4.0
Probab=28.61 E-value=73 Score=27.14 Aligned_cols=27 Identities=22% Similarity=0.231 Sum_probs=20.8
Q ss_pred CcEEEEEcCCCcc--CHHHHHHHHHHHHh
Q 047833 5 KETIVLFPFMAQG--HIIPFLALALHLEK 31 (473)
Q Consensus 5 ~~~il~~~~~~~G--H~~p~l~La~~L~~ 31 (473)
.+|||+..|+-+| .+||...++++|.+
T Consensus 3 ~m~VLvTGF~PF~~~~~NPS~~~v~~L~~ 31 (215)
T 3giu_A 3 AMHILVTGFAPFDNQNINPSWEAVTQLED 31 (215)
T ss_dssp -CEEEEEEECCCTTCSCCHHHHHHHHSCS
T ss_pred CcEEEEEecCCCCCCCCChHHHHHHHhcc
Confidence 4589988876444 47999999999976
No 256
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=28.19 E-value=32 Score=31.27 Aligned_cols=35 Identities=11% Similarity=0.097 Sum_probs=26.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCc-EEEEEcCC
Q 047833 3 QRKETIVLFPFMAQGHIIPFLALALHLEKTNKY-TITFVNTP 43 (473)
Q Consensus 3 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh-~Vt~~~~~ 43 (473)
.+++||.|+..|..| ..+|..|.+ .|| +|+++...
T Consensus 22 ~~~~~I~iIG~G~mG-----~~~A~~L~~-~G~~~V~~~dr~ 57 (312)
T 3qsg_A 22 SNAMKLGFIGFGEAA-----SAIASGLRQ-AGAIDMAAYDAA 57 (312)
T ss_dssp ---CEEEEECCSHHH-----HHHHHHHHH-HSCCEEEEECSS
T ss_pred CCCCEEEEECccHHH-----HHHHHHHHH-CCCCeEEEEcCC
Confidence 456799999887666 478999999 999 99998653
No 257
>2cob_A LCOR protein; MLR2, KIAA1795, helix-turn-helix, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.4.1.15
Probab=27.99 E-value=68 Score=21.73 Aligned_cols=31 Identities=13% Similarity=0.103 Sum_probs=23.5
Q ss_pred CCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHH
Q 047833 403 KSSEVLKKDIAAKIELVMNETEKGIELRKNAYEV 436 (473)
Q Consensus 403 ~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~l 436 (473)
+....++++|..||+.|.++. - ++.+.|+.+
T Consensus 10 ryr~Yte~~L~~Ai~aVr~g~-m--S~~~Aak~y 40 (70)
T 2cob_A 10 RYRQYNSEILEEAISVVMSGK-M--SVSKAQSIY 40 (70)
T ss_dssp CSCCCCHHHHHHHHHHHHTTS-S--CHHHHHHHH
T ss_pred cccccCHHHHHHHHHHHHcCC-c--cHHHHHHHh
Confidence 347899999999999999983 1 466666554
No 258
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=27.94 E-value=60 Score=29.34 Aligned_cols=35 Identities=23% Similarity=0.324 Sum_probs=27.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 4 RKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 4 ~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
+|+||.|+-.|..| ..+|..|.+ .||+|+++....
T Consensus 20 ~m~~I~iIG~G~mG-----~~~A~~l~~-~G~~V~~~dr~~ 54 (310)
T 3doj_A 20 HMMEVGFLGLGIMG-----KAMSMNLLK-NGFKVTVWNRTL 54 (310)
T ss_dssp CSCEEEEECCSHHH-----HHHHHHHHH-TTCEEEEECSSG
T ss_pred cCCEEEEECccHHH-----HHHHHHHHH-CCCeEEEEeCCH
Confidence 46799999877555 578999999 999999986443
No 259
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=27.93 E-value=66 Score=29.49 Aligned_cols=73 Identities=10% Similarity=0.010 Sum_probs=51.2
Q ss_pred CCHHHHHHHHHHHHhCCCceEEEECCCCCCCccccccccCCcEEEecccChHHhhccCCcceeEeccCcchHHHHHh--h
Q 047833 292 IATSQMMQLAMALEASGKNFIWVVRPPIGFDINSEIKCSGQGLVVHKWAPQVEILSHRSVSVFLSHCGWNSVLEALS--H 369 (473)
Q Consensus 292 ~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~v~~~I~HGG~gt~~eal~--~ 369 (473)
.+.+....+.+++...+.+.||.+...- .-.++.++++.+.+-++|+. ||-..-..+++-+++ .
T Consensus 62 td~~Ra~dL~~a~~Dp~i~aI~~~rGG~------------g~~rlL~~LD~~~i~~~PK~--~~GySDiT~L~~al~~~~ 127 (327)
T 4h1h_A 62 SIRSRVADIHEAFNDSSVKAILTVIGGF------------NSNQLLPYLDYDLISENPKI--LCGFSDITALATAIYTQT 127 (327)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCS------------CGGGGGGGCCHHHHHHSCCE--EEECTTHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcCCch------------hHHHHhhhcchhhhccCCeE--EEecccccHHHHHHHHhc
Confidence 3457778899999999999999886441 22344577777777777774 887777777777765 4
Q ss_pred CCcEEeccc
Q 047833 370 GVPIIGWPL 378 (473)
Q Consensus 370 GvP~l~~P~ 378 (473)
|...+.-|.
T Consensus 128 g~~t~hGp~ 136 (327)
T 4h1h_A 128 ELITYSGAH 136 (327)
T ss_dssp CBCEEECCC
T ss_pred CeEEEeCcc
Confidence 666665554
No 260
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=27.92 E-value=96 Score=22.58 Aligned_cols=48 Identities=13% Similarity=0.078 Sum_probs=34.0
Q ss_pred hCCcEEeccccccchhhHHHHHHhhcceEEEecCCCCccCHHHHHHHHHHHHcCC
Q 047833 369 HGVPIIGWPLAAEQFYNSKLLEEEIGVCVEVARGKSSEVLKKDIAAKIELVMNET 423 (473)
Q Consensus 369 ~GvP~l~~P~~~DQ~~nA~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~~~ 423 (473)
..+|++++ ..++........+. |+--.+.+ .++.++|.+.|++++..+
T Consensus 79 ~~~~ii~~--~~~~~~~~~~~~~~-g~~~~l~k----p~~~~~l~~~i~~~~~~~ 126 (127)
T 2gkg_A 79 KNVPIVII--GNPDGFAQHRKLKA-HADEYVAK----PVDADQLVERAGALIGFP 126 (127)
T ss_dssp TTSCEEEE--ECGGGHHHHHHSTT-CCSEEEES----SCCHHHHHHHHHHHHCCC
T ss_pred cCCCEEEE--ecCCchhHHHHHHh-CcchheeC----CCCHHHHHHHHHHHHcCC
Confidence 57899998 34444455555545 77656654 689999999999998754
No 261
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=27.83 E-value=72 Score=24.40 Aligned_cols=31 Identities=6% Similarity=0.019 Sum_probs=20.3
Q ss_pred CccEEEECCCcc--hHHHHHHHh---------CCceEEEecc
Q 047833 117 KPLCIITDMFFG--WCKEIAQEY---------GIFHAIFIGG 147 (473)
Q Consensus 117 ~pD~Vv~d~~~~--~~~~~A~~~---------giP~v~~~~~ 147 (473)
+||+||.|...+ .|..+.+.+ .+|.+.++..
T Consensus 58 ~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~ 99 (143)
T 3m6m_D 58 DYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSAD 99 (143)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCC
Confidence 899999997655 344444333 3788887653
No 262
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=27.78 E-value=67 Score=29.57 Aligned_cols=73 Identities=8% Similarity=0.097 Sum_probs=56.2
Q ss_pred CCHHHHHHHHHHHHhCCCceEEEECCCCCCCccccccccCCcEEEecccChHHhhccCCcceeEeccCcchHHHHHh--h
Q 047833 292 IATSQMMQLAMALEASGKNFIWVVRPPIGFDINSEIKCSGQGLVVHKWAPQVEILSHRSVSVFLSHCGWNSVLEALS--H 369 (473)
Q Consensus 292 ~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~v~~~I~HGG~gt~~eal~--~ 369 (473)
.+.+....+.+++...+.+.||.+...- .-.++.+++++..+-++|+. ||-+.-..+++-+++ .
T Consensus 63 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~------------g~~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~al~~~~ 128 (336)
T 3sr3_A 63 SIQERAKELNALIRNPNVSCIMSTIGGM------------NSNSLLPYIDYDAFQNNPKI--MIGYSDATALLLGIYAKT 128 (336)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCS------------CGGGGGGGSCHHHHHHSCCE--EEECGGGHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEccccc------------cHHHHhhhcChhHHhhCCeE--EEEechHHHHHHHHHHhc
Confidence 3467788899999999999999886541 22344577777777778875 999999988988887 5
Q ss_pred CCcEEeccc
Q 047833 370 GVPIIGWPL 378 (473)
Q Consensus 370 GvP~l~~P~ 378 (473)
|++.+.-|.
T Consensus 129 G~~t~hGp~ 137 (336)
T 3sr3_A 129 GIPTFYGPA 137 (336)
T ss_dssp CCCEEECCC
T ss_pred CceEEECCh
Confidence 898888886
No 263
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=27.76 E-value=51 Score=31.89 Aligned_cols=34 Identities=21% Similarity=0.228 Sum_probs=27.5
Q ss_pred HHHHHHHhHhhhcCCCCccEEEECCCcchHHHHHHHhCCceEEE
Q 047833 101 HFKKLVNDLIDEQNGYKPLCIITDMFFGWCKEIAQEYGIFHAIF 144 (473)
Q Consensus 101 ~~~~~l~~~~~~~~~~~pD~Vv~d~~~~~~~~~A~~~giP~v~~ 144 (473)
.+.+++++. +||++|.+.. ...+|+++|||++.+
T Consensus 376 ~l~~~i~~~-------~pDl~ig~~~---~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 376 DVHQWIKNE-------GVDLLISNTY---GKFIAREENIPFVRF 409 (458)
T ss_dssp HHHHHHHHS-------CCSEEEESGG---GHHHHHHHTCCEEEC
T ss_pred HHHHHHHhc-------CCCEEEeCcc---hHHHHHHcCCCEEEe
Confidence 345667777 8999999864 578899999999986
No 264
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=27.55 E-value=65 Score=27.65 Aligned_cols=37 Identities=8% Similarity=-0.017 Sum_probs=30.0
Q ss_pred CCcEEEEEcC-CCccCHHHHHHHHHHHHhCCCcEEEEEc
Q 047833 4 RKETIVLFPF-MAQGHIIPFLALALHLEKTNKYTITFVN 41 (473)
Q Consensus 4 ~~~~il~~~~-~~~GH~~p~l~La~~L~~~rGh~Vt~~~ 41 (473)
+|..|++... ..-|-..-...|++.|++ +|++|.++=
T Consensus 3 ~mk~i~Itgt~t~vGKT~vt~~L~~~l~~-~G~~V~~~K 40 (228)
T 3of5_A 3 AMKKFFIIGTDTEVGKTYISTKLIEVCEH-QNIKSLCLK 40 (228)
T ss_dssp TCEEEEEEESSSSSCHHHHHHHHHHHHHH-TTCCEEEEC
T ss_pred CCcEEEEEeCCCCCCHHHHHHHHHHHHHH-CCCeeEEec
Confidence 4556666655 466999999999999999 999999963
No 265
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=27.49 E-value=1.2e+02 Score=25.38 Aligned_cols=103 Identities=17% Similarity=0.141 Sum_probs=54.3
Q ss_pred hhhHhhhhcCCCCCeEEEEeeCCcccCCHHHHHHHHHHHHhCCCceEEEECCCCCCCccccccccCCcEEEecccC--hH
Q 047833 266 TELCKKWLDTKPYTSVLYVSFGSQNTIATSQMMQLAMALEASGKNFIWVVRPPIGFDINSEIKCSGQGLVVHKWAP--QV 343 (473)
Q Consensus 266 ~~~~~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vp--~~ 343 (473)
..++-++|.++. ...|+.|.-. -......++....+-++|-+..... .+ .+.....-..+++++... ..
T Consensus 42 A~~lg~~La~~g---~~lV~GGG~~----GlM~a~~~gA~~~GG~viGv~p~~l-~~-~e~~~~~~~~~i~~~~~~~Rk~ 112 (199)
T 3qua_A 42 AAEVGSSIAARG---WTLVSGGGNV----SAMGAVAQAARAKGGHTVGVIPKAL-VH-RELADVDAAELIVTDTMRERKR 112 (199)
T ss_dssp HHHHHHHHHHTT---CEEEECCBCS----HHHHHHHHHHHHTTCCEEEEEEGGG-TT-TTTBCTTSSEEEEESSHHHHHH
T ss_pred HHHHHHHHHHCC---CEEEECCCcc----CHHHHHHHHHHHcCCcEEEEeCchh-hh-ccccCCCCCeeEEcCCHHHHHH
Confidence 345566665542 3455554321 2344455555566666666654221 00 000111113345556555 23
Q ss_pred HhhccCCcceeEeccCcchHHHHHh---------hCCcEEeccc
Q 047833 344 EILSHRSVSVFLSHCGWNSVLEALS---------HGVPIIGWPL 378 (473)
Q Consensus 344 ~ll~~~~v~~~I~HGG~gt~~eal~---------~GvP~l~~P~ 378 (473)
.+..+++. .++--||.||.-|..- +++|++++-.
T Consensus 113 ~m~~~sda-~IalPGG~GTldEl~e~lt~~qlg~~~kPvvlln~ 155 (199)
T 3qua_A 113 EMEHRSDA-FIALPGGIGTLEEFFEAWTAGYLGMHDKPLILLDP 155 (199)
T ss_dssp HHHHHCSE-EEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECT
T ss_pred HHHHhcCc-cEEeCCCccHHHHHHHHHHHHHhccCCCCEEEEcC
Confidence 33445554 5677889999887742 6899998853
No 266
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=27.35 E-value=59 Score=28.77 Aligned_cols=40 Identities=13% Similarity=-0.013 Sum_probs=31.7
Q ss_pred CcEEEEEcCC---CccCHHHHHHHHHHHHhCCCcEEEEEcCCcc
Q 047833 5 KETIVLFPFM---AQGHIIPFLALALHLEKTNKYTITFVNTPLN 45 (473)
Q Consensus 5 ~~~il~~~~~---~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~ 45 (473)
.+|.+|++.| +.|-=.-.-.|+.-|+. ||++|+..=-.++
T Consensus 22 ~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~-~G~~Vt~~K~DPY 64 (295)
T 2vo1_A 22 SMKYILVTGGVISGIGKGIIASSVGTILKS-CGLHVTSIKIDPY 64 (295)
T ss_dssp CCEEEEEEECSSSSSSHHHHHHHHHHHHHH-TTCCEEEEEEECS
T ss_pred cceEEEEcCCcccccccHHHHHHHHHHHHH-CCCcceeeecccc
Confidence 4688888886 45666667889999999 9999999865554
No 267
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=27.23 E-value=59 Score=28.66 Aligned_cols=34 Identities=21% Similarity=0.189 Sum_probs=24.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
|++|+++. + |-+ -..|++.|.+ +||+|+.++-..
T Consensus 3 ~~~ilVtG--a-G~i--G~~l~~~L~~-~g~~V~~~~r~~ 36 (286)
T 3gpi_A 3 LSKILIAG--C-GDL--GLELARRLTA-QGHEVTGLRRSA 36 (286)
T ss_dssp CCCEEEEC--C-SHH--HHHHHHHHHH-TTCCEEEEECTT
T ss_pred CCcEEEEC--C-CHH--HHHHHHHHHH-CCCEEEEEeCCc
Confidence 35777773 4 633 4578999999 999999997543
No 268
>1g8m_A Aicar transformylase-IMP cyclohydrolase; homodimer, 2 functional domains, IMPCH domain = alpha/beta/alpha; HET: G; 1.75A {Gallus gallus} SCOP: c.24.1.3 c.97.1.4 PDB: 1thz_A* 2b1g_A* 2b1i_A* 2iu0_A* 2iu3_A* 1m9n_A* 1oz0_A* 1pkx_A* 1p4r_A* 1pl0_A*
Probab=27.23 E-value=52 Score=32.50 Aligned_cols=53 Identities=13% Similarity=0.139 Sum_probs=35.7
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhccCCCCCCceEEecC
Q 047833 1 MAQRKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLRKLKSSVPQNSSINLLEIP 65 (473)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~ 65 (473)
|...+-++++...- =.-++.+|+.|.+ .|+++. ++......++. .|+....+.
T Consensus 1 ~~~~~G~aLISV~D----K~~iv~lAk~L~~-lGf~I~--ATgGTAk~L~e-----~GI~v~~V~ 53 (593)
T 1g8m_A 1 MAARQQLALLSVSE----KAGLVEFARSLNA-LGLGLI--ASGGTATALRD-----AGLPVRDVS 53 (593)
T ss_dssp ---CCCEEEEEESC----CTTHHHHHHHHHH-TTCEEE--ECHHHHHHHHH-----TTCCCEEHH
T ss_pred CCCCCCEEEEEEeC----cHhHHHHHHHHHH-CCCEEE--EchHHHHHHHH-----CCCeEEEee
Confidence 44444456655443 3447889999999 999876 47777888888 666776664
No 269
>2yrx_A Phosphoribosylglycinamide synthetase; glycinamide ribonucleotide synthetase, GAR synthetase; HET: AMP; 1.90A {Geobacillus kaustophilus} PDB: 2yrw_A* 2ys6_A* 2ys7_A
Probab=27.21 E-value=3.6e+02 Score=25.55 Aligned_cols=34 Identities=9% Similarity=0.013 Sum_probs=23.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 047833 4 RKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNT 42 (473)
Q Consensus 4 ~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~ 42 (473)
++++|+++..++ ...+++..|+++.|++++++.+
T Consensus 20 ~~~~iliiG~g~-----r~~a~a~~~~~~~g~~~v~~~~ 53 (451)
T 2yrx_A 20 SHMNVLVIGRGG-----REHAIAWKAAQSPLVGKLYVAP 53 (451)
T ss_dssp SSEEEEEEECSH-----HHHHHHHHHHTCTTEEEEEEEE
T ss_pred CCCEEEEECCCH-----HHHHHHHHHHhcCCCCEEEEEC
Confidence 357899988773 3567888886526898877754
No 270
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=27.20 E-value=56 Score=28.29 Aligned_cols=38 Identities=13% Similarity=0.136 Sum_probs=29.9
Q ss_pred cEEE-EEc-CCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 6 ETIV-LFP-FMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 6 ~~il-~~~-~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
++++ |++ -|+.|-..-...||..|.+ +|++|.++=...
T Consensus 2 ~~vi~v~s~kgGvGKTt~a~~LA~~la~-~g~~VlliD~D~ 41 (260)
T 3q9l_A 2 ARIIVVTSGKGGVGKTTSSAAIATGLAQ-KGKKTVVIDFAI 41 (260)
T ss_dssp CEEEEEECSSTTSSHHHHHHHHHHHHHH-TTCCEEEEECCC
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHh-CCCcEEEEECCC
Confidence 3554 433 3677899999999999999 999999986554
No 271
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=27.06 E-value=61 Score=29.12 Aligned_cols=38 Identities=5% Similarity=-0.024 Sum_probs=31.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTP 43 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~ 43 (473)
+..|+|+.-|+-|=..-...||..|++ +|++|.++=..
T Consensus 41 ~~vI~v~~KGGvGKTT~a~nLA~~La~-~G~~VlliD~D 78 (307)
T 3end_A 41 AKVFAVYGKGGIGKSTTSSNLSAAFSI-LGKRVLQIGCD 78 (307)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHHH-TTCCEEEEEES
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHH-CCCeEEEEeCC
Confidence 344556666788999999999999999 99999998544
No 272
>2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens}
Probab=26.87 E-value=3.6e+02 Score=25.55 Aligned_cols=33 Identities=12% Similarity=0.111 Sum_probs=22.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 047833 6 ETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTP 43 (473)
Q Consensus 6 ~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~ 43 (473)
+||+++..++ ...++++.|.++.|++++++.+.
T Consensus 25 ~~IlIlG~g~-----r~~al~~~~a~~~g~~~v~~~~~ 57 (452)
T 2qk4_A 25 ARVLIIGSGG-----REHTLAWKLAQSHHVKQVLVAPG 57 (452)
T ss_dssp EEEEEEECSH-----HHHHHHHHHTTCTTEEEEEEEEC
T ss_pred cEEEEECCCH-----HHHHHHHHHHhcCCCCEEEEECC
Confidence 5898888763 34667888765268987777543
No 273
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=26.86 E-value=42 Score=31.34 Aligned_cols=29 Identities=21% Similarity=0.158 Sum_probs=24.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEE
Q 047833 6 ETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFV 40 (473)
Q Consensus 6 ~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~ 40 (473)
+||+|+-.|--| +.+|..|++ +||+|+++
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~-~G~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRK-HGIKVTIY 30 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHH-TTCEEEEE
T ss_pred CEEEEECcCHHH-----HHHHHHHHh-CCCCEEEE
Confidence 588888777444 788999999 99999997
No 274
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=26.49 E-value=74 Score=26.67 Aligned_cols=36 Identities=19% Similarity=0.071 Sum_probs=23.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHH-hCCCcEEEEEcCCc
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLE-KTNKYTITFVNTPL 44 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~-~~rGh~Vt~~~~~~ 44 (473)
|+|.++++.+ .|-+ -..+++.|. + +||+|+.++-..
T Consensus 4 mmk~vlVtGa-sg~i--G~~~~~~l~~~-~g~~V~~~~r~~ 40 (221)
T 3r6d_A 4 MYXYITILGA-AGQI--AQXLTATLLTY-TDMHITLYGRQL 40 (221)
T ss_dssp SCSEEEEEST-TSHH--HHHHHHHHHHH-CCCEEEEEESSH
T ss_pred eEEEEEEEeC-CcHH--HHHHHHHHHhc-CCceEEEEecCc
Confidence 4453444433 2322 368889999 9 999999987543
No 275
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=26.31 E-value=63 Score=30.19 Aligned_cols=37 Identities=16% Similarity=0.099 Sum_probs=27.7
Q ss_pred CcEEEEEcCCCcc-C---HHHHHHHHHHH-HhCCCcEEEEEcC
Q 047833 5 KETIVLFPFMAQG-H---IIPFLALALHL-EKTNKYTITFVNT 42 (473)
Q Consensus 5 ~~~il~~~~~~~G-H---~~p~l~La~~L-~~~rGh~Vt~~~~ 42 (473)
|+||+++..|..+ | +.....++++| .+ .||+|+.+..
T Consensus 3 k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~-~g~~v~~i~~ 44 (377)
T 1ehi_A 3 KKRVALIFGGNSSEHDVSKRSAQNFYNAIEAT-GKYEIIVFAI 44 (377)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHH-SSEEEEEEEE
T ss_pred CcEEEEEeCCCCCCcceeHHHHHHHHHHhCcc-cCcEEEEEEE
Confidence 4689888766444 3 33467889999 99 9999999853
No 276
>4gxh_A Pyrrolidone-carboxylate peptidase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, hydrolase; 2.70A {Xenorhabdus bovienii}
Probab=26.30 E-value=67 Score=27.43 Aligned_cols=27 Identities=26% Similarity=0.266 Sum_probs=20.2
Q ss_pred CcEEEEEcCCCcc-C-HHHHHHHHHHHHh
Q 047833 5 KETIVLFPFMAQG-H-IIPFLALALHLEK 31 (473)
Q Consensus 5 ~~~il~~~~~~~G-H-~~p~l~La~~L~~ 31 (473)
|++||+..|+-+| | +||...+++.|..
T Consensus 2 MktVLvTGF~PF~~~~~NPS~~~v~~L~~ 30 (216)
T 4gxh_A 2 MKTILVTAFDPFGGEAINPSWEAIKPLQG 30 (216)
T ss_dssp -CEEEEEEECCCTTSSSCHHHHHHGGGTT
T ss_pred CCEEEEeeccCCCCCCCChhHHHHHhhhc
Confidence 5589888876443 3 6999999999976
No 277
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=26.27 E-value=69 Score=28.37 Aligned_cols=34 Identities=21% Similarity=0.092 Sum_probs=26.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNT 42 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~ 42 (473)
+.|.++++.++.| =-.++|+.|.+ +|++|++..-
T Consensus 24 ~~k~~lVTGas~G---IG~~ia~~la~-~G~~V~~~~r 57 (281)
T 3v2h_A 24 MTKTAVITGSTSG---IGLAIARTLAK-AGANIVLNGF 57 (281)
T ss_dssp TTCEEEEETCSSH---HHHHHHHHHHH-TTCEEEEECC
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHH-CCCEEEEEeC
Confidence 3467778777654 34688999999 9999998864
No 278
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=26.25 E-value=1.2e+02 Score=27.80 Aligned_cols=81 Identities=11% Similarity=0.065 Sum_probs=45.9
Q ss_pred EEEEeeCCcccCCHHHHHHHHHHHHhCCCceEEEECCCCCCCccccccccCCcEEEecccChHHhhccCCcceeEeccCc
Q 047833 281 VLYVSFGSQNTIATSQMMQLAMALEASGKNFIWVVRPPIGFDINSEIKCSGQGLVVHKWAPQVEILSHRSVSVFLSHCGW 360 (473)
Q Consensus 281 ~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~v~~~I~HGG~ 360 (473)
.|+++-.|-.....+....+...|++.+..+.+..... +... ... ........ .+++|.=||-
T Consensus 28 ~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~~----~~~a----------~~~-~~~~~~~~--~d~vvv~GGD 90 (337)
T 2qv7_A 28 RIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEK----IGDA----------TLE-AERAMHEN--YDVLIAAGGD 90 (337)
T ss_dssp EEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECCS----TTHH----------HHH-HHHHTTTT--CSEEEEEECH
T ss_pred EEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEecC----cchH----------HHH-HHHHhhcC--CCEEEEEcCc
Confidence 34444433322234556677888888777665544211 0000 001 11111222 3469999999
Q ss_pred chHHHHHh------hCCcEEeccc
Q 047833 361 NSVLEALS------HGVPIIGWPL 378 (473)
Q Consensus 361 gt~~eal~------~GvP~l~~P~ 378 (473)
||+.|++. .++|+.++|.
T Consensus 91 GTv~~v~~~l~~~~~~~pl~iIP~ 114 (337)
T 2qv7_A 91 GTLNEVVNGIAEKPNRPKLGVIPM 114 (337)
T ss_dssp HHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred hHHHHHHHHHHhCCCCCcEEEecC
Confidence 99999864 4689999997
No 279
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=26.15 E-value=3e+02 Score=25.05 Aligned_cols=34 Identities=21% Similarity=0.161 Sum_probs=25.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 7 TIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 7 ~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
|+++++.++.| =-.++|+.|.+ +|++|+++.-..
T Consensus 46 k~vlVTGas~G---IG~aia~~La~-~Ga~Vvl~~r~~ 79 (346)
T 3kvo_A 46 CTVFITGASRG---IGKAIALKAAK-DGANIVIAAKTA 79 (346)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHT-TTCEEEEEESCC
T ss_pred CEEEEeCCChH---HHHHHHHHHHH-CCCEEEEEECCh
Confidence 67778877654 34688999999 999999987443
No 280
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=26.03 E-value=29 Score=33.86 Aligned_cols=30 Identities=20% Similarity=0.258 Sum_probs=23.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEE
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFV 40 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~ 40 (473)
|+||+++-.|--| |.-|..|++ +||+|+++
T Consensus 1 Mk~VvVIGaG~~G-----L~aA~~La~-~G~~V~Vl 30 (501)
T 4dgk_A 1 MKPTTVIGAGFGG-----LALAIRLQA-AGIPVLLL 30 (501)
T ss_dssp CCCEEEECCHHHH-----HHHHHHHHH-TTCCEEEE
T ss_pred CCCEEEECCcHHH-----HHHHHHHHH-CCCcEEEE
Confidence 4578888766333 777889999 99999997
No 281
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=25.84 E-value=75 Score=29.32 Aligned_cols=34 Identities=9% Similarity=-0.149 Sum_probs=26.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
|.+|+++..+ .-...++++|++ .||+|.++.+..
T Consensus 1 M~~Ililg~g-----~~~~~~~~a~~~-~G~~v~~~~~~~ 34 (365)
T 2z04_A 1 MLTVGILGGG-----QLGWMTILEGRK-LGFKFHVLEDKE 34 (365)
T ss_dssp -CEEEEECCS-----HHHHHHHHHHGG-GTCEEEEECSSS
T ss_pred CCEEEEECCC-----HHHHHHHHHHHH-CCCEEEEEeCCC
Confidence 3578888654 446788999999 999999987654
No 282
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=25.70 E-value=70 Score=29.41 Aligned_cols=29 Identities=14% Similarity=0.181 Sum_probs=20.3
Q ss_pred CccEEEECCCcch-HHHHHHHhCCceEEEe
Q 047833 117 KPLCIITDMFFGW-CKEIAQEYGIFHAIFI 145 (473)
Q Consensus 117 ~pD~Vv~d~~~~~-~~~~A~~~giP~v~~~ 145 (473)
+||+||....... .....+.+|||++.+.
T Consensus 96 ~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~ 125 (346)
T 2etv_A 96 QPDVVFITYVDRXTAXDIQEXTGIPVVVLS 125 (346)
T ss_dssp CCSEEEEESCCHHHHHHHHHHHTSCEEEEC
T ss_pred CCCEEEEeCCccchHHHHHHhcCCcEEEEe
Confidence 8999998754321 2234577899999974
No 283
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=25.67 E-value=61 Score=29.54 Aligned_cols=38 Identities=18% Similarity=0.086 Sum_probs=32.4
Q ss_pred cEEEEEcC-CCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 6 ETIVLFPF-MAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 6 ~~il~~~~-~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
.+|+|++. |+-|-..-...||..|++ +|++|.++....
T Consensus 14 ~~i~v~sgKGGvGKTTvA~~LA~~lA~-~G~rVLlvD~D~ 52 (324)
T 3zq6_A 14 TTFVFIGGKGGVGKTTISAATALWMAR-SGKKTLVISTDP 52 (324)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHHHH-TTCCEEEEECCS
T ss_pred eEEEEEeCCCCchHHHHHHHHHHHHHH-CCCcEEEEeCCC
Confidence 46655544 788999999999999999 999999999776
No 284
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=25.56 E-value=82 Score=27.40 Aligned_cols=34 Identities=12% Similarity=0.081 Sum_probs=25.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 7 TIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 7 ~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
+.+++++++.| =-..+|+.|.+ +|++|.++.-..
T Consensus 30 k~vlITGas~g---IG~~la~~l~~-~G~~V~~~~r~~ 63 (262)
T 3rkr_A 30 QVAVVTGASRG---IGAAIARKLGS-LGARVVLTARDV 63 (262)
T ss_dssp CEEEESSTTSH---HHHHHHHHHHH-TTCEEEEEESCH
T ss_pred CEEEEECCCCh---HHHHHHHHHHH-CCCEEEEEECCH
Confidence 67777776654 34688999999 999998886443
No 285
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=25.54 E-value=97 Score=27.91 Aligned_cols=39 Identities=3% Similarity=-0.158 Sum_probs=29.3
Q ss_pred CcEEEEEcCCCcc-C---HHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 5 KETIVLFPFMAQG-H---IIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 5 ~~~il~~~~~~~G-H---~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
+.||+++..|..+ | +.....++++|.+ .||+|..+.+..
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~-~g~~v~~i~~~~ 55 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRD-AGIDAHPFDPAE 55 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHH-TTCEEEEECTTT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHH-CCCEEEEEeCCC
Confidence 5688888765333 2 3467889999999 999999998544
No 286
>1col_A Colicin A; antibacterial protein; 2.40A {Escherichia coli} SCOP: f.1.1.1
Probab=25.53 E-value=49 Score=27.68 Aligned_cols=40 Identities=20% Similarity=0.423 Sum_probs=27.2
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccccCCcHHHHHHHHHHHHHhhhhh
Q 047833 425 KGIELRKNAYEVREIIKNAFKNEENFQGSSVKAMNQFLNAASMVKET 471 (473)
Q Consensus 425 ~~~~~~~~a~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 471 (473)
.|+.|++.|+++++.++ +..|-.-|+.++-++.++..+.+
T Consensus 30 ~G~Ky~~~A~eiA~~l~-------~~kGKkIRs~~dAl~s~eK~k~n 69 (204)
T 1col_A 30 LGDKYKAIAKDIADNIK-------NFQGKTIRSFDDAMASLNKITAN 69 (204)
T ss_dssp HCHHHHHHHHHHHHHHH-------TCTTCCCCCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHH-------HhcCCccCCHHHHHHHHHHHhhC
Confidence 56679999999999997 33665555666666655555443
No 287
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=25.50 E-value=70 Score=28.55 Aligned_cols=36 Identities=22% Similarity=0.245 Sum_probs=25.9
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 047833 1 MAQRKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTP 43 (473)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~ 43 (473)
|+ +++||.|+..|..|. .+|..|.+ .||+|+++...
T Consensus 1 M~-~~~~i~iiG~G~~G~-----~~a~~l~~-~g~~V~~~~~~ 36 (301)
T 3cky_A 1 ME-KSIKIGFIGLGAMGK-----PMAINLLK-EGVTVYAFDLM 36 (301)
T ss_dssp ----CCEEEEECCCTTHH-----HHHHHHHH-TTCEEEEECSS
T ss_pred CC-CCCEEEEECccHHHH-----HHHHHHHH-CCCeEEEEeCC
Confidence 55 356899998777764 46888999 99999987543
No 288
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=25.45 E-value=68 Score=29.23 Aligned_cols=70 Identities=9% Similarity=0.163 Sum_probs=38.6
Q ss_pred HhhcCCCeEEecccCCCccCCCCCCCCCCCchhhHhhhhcCCCCCeEEEEeeCCcc---cCCHHHHHHHHHHHHhCCCce
Q 047833 235 KRKFGRSVWPIGPVLLSTENRGGAGKEYGISTELCKKWLDTKPYTSVLYVSFGSQN---TIATSQMMQLAMALEASGKNF 311 (473)
Q Consensus 235 ~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~GS~~---~~~~~~~~~~~~al~~~~~~~ 311 (473)
....|.++..+|.+.+... ....+++..+++...=+++ -+|+.. ......+..+.+.+.+.+..+
T Consensus 104 ~~~~p~r~~~~~~l~~~~~---------~~a~~el~~~~~~~g~~Gv---~l~~~~~~~~l~d~~~~~~~~~~~e~~lpv 171 (336)
T 2wm1_A 104 VVSYPRRFVGLGTLPMQAP---------ELAVKEMERCVKELGFPGV---QIGTHVNEWDLNAQELFPVYAAAERLKCSL 171 (336)
T ss_dssp HHHSTTTEEEEECCCTTSH---------HHHHHHHHHHHHTSCCSEE---EEESEETTEETTCGGGHHHHHHHHHHTCEE
T ss_pred HHhccCceeEEEeCCCcCH---------HHHHHHHHHHHHccCCeEE---EECCcCCCCCCCCccHHHHHHHHHHcCCEE
Confidence 3445556666665554320 0123556666643222333 233332 234566788889999988887
Q ss_pred EEEEC
Q 047833 312 IWVVR 316 (473)
Q Consensus 312 i~~~~ 316 (473)
++-.+
T Consensus 172 ~iH~~ 176 (336)
T 2wm1_A 172 FVHPW 176 (336)
T ss_dssp EEECC
T ss_pred EECCC
Confidence 77664
No 289
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=25.39 E-value=75 Score=28.85 Aligned_cols=35 Identities=20% Similarity=0.235 Sum_probs=28.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 4 RKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 4 ~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
+++||.|+-.|..| ..+|..|.+ .||+|+++....
T Consensus 30 ~~~~I~iIG~G~mG-----~~~a~~l~~-~G~~V~~~dr~~ 64 (320)
T 4dll_A 30 YARKITFLGTGSMG-----LPMARRLCE-AGYALQVWNRTP 64 (320)
T ss_dssp CCSEEEEECCTTTH-----HHHHHHHHH-TTCEEEEECSCH
T ss_pred CCCEEEEECccHHH-----HHHHHHHHh-CCCeEEEEcCCH
Confidence 35689999888777 568899999 999999885443
No 290
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=25.13 E-value=3.7e+02 Score=24.07 Aligned_cols=34 Identities=15% Similarity=0.067 Sum_probs=23.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 6 ETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 6 ~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
++|+++. +.|.+- ..|+++|.+ +||+|+.++-..
T Consensus 11 ~~IlVtG--atG~iG--~~l~~~L~~-~g~~V~~l~R~~ 44 (346)
T 3i6i_A 11 GRVLIAG--ATGFIG--QFVATASLD-AHRPTYILARPG 44 (346)
T ss_dssp CCEEEEC--TTSHHH--HHHHHHHHH-TTCCEEEEECSS
T ss_pred CeEEEEC--CCcHHH--HHHHHHHHH-CCCCEEEEECCC
Confidence 3566554 445333 468899999 999999998654
No 291
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=24.98 E-value=69 Score=27.22 Aligned_cols=36 Identities=17% Similarity=0.124 Sum_probs=28.8
Q ss_pred EEEEcC-CCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 8 IVLFPF-MAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 8 il~~~~-~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
|++++. |+.|-..-...||..|.+ +|++|.++-...
T Consensus 5 i~v~s~kgGvGKTt~a~~LA~~la~-~g~~VlliD~D~ 41 (237)
T 1g3q_A 5 ISIVSGKGGTGKTTVTANLSVALGD-RGRKVLAVDGDL 41 (237)
T ss_dssp EEEECSSTTSSHHHHHHHHHHHHHH-TTCCEEEEECCT
T ss_pred EEEecCCCCCCHHHHHHHHHHHHHh-cCCeEEEEeCCC
Confidence 444443 677999999999999999 999999986543
No 292
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=24.85 E-value=66 Score=28.09 Aligned_cols=36 Identities=17% Similarity=0.109 Sum_probs=30.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 047833 6 ETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNT 42 (473)
Q Consensus 6 ~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~ 42 (473)
..|.|..-|+-|-..-...||..|++ +|++|.++=.
T Consensus 2 ~vI~vs~KGGvGKTT~a~nLA~~la~-~G~~VlliD~ 37 (269)
T 1cp2_A 2 RQVAIYGKGGIGKSTTTQNLTSGLHA-MGKTIMVVGC 37 (269)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHT-TTCCEEEEEE
T ss_pred cEEEEecCCCCcHHHHHHHHHHHHHH-CCCcEEEEcC
Confidence 35667666788999999999999999 9999999743
No 293
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=24.82 E-value=96 Score=28.15 Aligned_cols=75 Identities=16% Similarity=0.219 Sum_probs=57.6
Q ss_pred cCCHHHHHHHHHHHHhCCCceEEEECCCCCCCccccccccCCcEEEecccChHHhhc-cCCcceeEeccCcchHHHHHh-
Q 047833 291 TIATSQMMQLAMALEASGKNFIWVVRPPIGFDINSEIKCSGQGLVVHKWAPQVEILS-HRSVSVFLSHCGWNSVLEALS- 368 (473)
Q Consensus 291 ~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~-~~~v~~~I~HGG~gt~~eal~- 368 (473)
..+.+....+.+++...+.+.||.+...- .-.++.++++...+-+ +|+. ||-+.-..+++-+++
T Consensus 63 gtd~~Ra~dL~~a~~Dp~i~aI~~~rGGy------------ga~rlLp~LD~~~i~~a~PK~--~iGySDiTaL~~al~~ 128 (311)
T 1zl0_A 63 GTVEQRLEDLHNAFDMPDITAVWCLRGGY------------GCGQLLPGLDWGRLQAASPRP--LIGFSDISVLLSAFHR 128 (311)
T ss_dssp SCHHHHHHHHHHHHHSTTEEEEEESCCSS------------CGGGGTTTCCHHHHHHSCCCC--EEECGGGHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEccCCc------------CHHHHhhccchhhhhccCCCE--EEEEchhHHHHHHHHH
Confidence 34567788899999999999999986541 2233457787787776 8885 999999999999987
Q ss_pred hCCcEEecccc
Q 047833 369 HGVPIIGWPLA 379 (473)
Q Consensus 369 ~GvP~l~~P~~ 379 (473)
.|.+.+.-|..
T Consensus 129 ~G~~t~hGp~~ 139 (311)
T 1zl0_A 129 HGLPAIHGPVA 139 (311)
T ss_dssp TTCCEEECCCG
T ss_pred cCCcEEECHhh
Confidence 48888887754
No 294
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=24.75 E-value=40 Score=31.60 Aligned_cols=35 Identities=17% Similarity=0.199 Sum_probs=26.2
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEc
Q 047833 1 MAQRKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVN 41 (473)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~ 41 (473)
|+.++.+|+++-.|-.| +.+|..|++ +|++|+++-
T Consensus 2 M~~~~~dVvIVGaG~aG-----l~~A~~L~~-~G~~V~viE 36 (399)
T 2x3n_A 2 MTDNHIDVLINGCGIGG-----AMLAYLLGR-QGHRVVVVE 36 (399)
T ss_dssp ---CEEEEEEECCSHHH-----HHHHHHHHH-TTCCEEEEC
T ss_pred CCCCcCCEEEECcCHHH-----HHHHHHHHh-CCCcEEEEe
Confidence 44445688888877444 788999999 999999984
No 295
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=24.74 E-value=41 Score=30.94 Aligned_cols=38 Identities=8% Similarity=0.151 Sum_probs=27.3
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCc-EEEEEcCCc
Q 047833 1 MAQRKETIVLFPFMAQGHIIPFLALALHLEKTNKY-TITFVNTPL 44 (473)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh-~Vt~~~~~~ 44 (473)
|.++++||.++..|+.|.- +|..|.. .|| +|+++-...
T Consensus 5 ~~~~~~kI~VIGaG~vG~~-----lA~~la~-~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 5 LVQRRKKVAMIGSGMIGGT-----MGYLCAL-RELADVVLYDVVK 43 (331)
T ss_dssp CCSCCCEEEEECCSHHHHH-----HHHHHHH-HTCCEEEEECSSS
T ss_pred cCCCCCEEEEECCCHHHHH-----HHHHHHh-CCCCeEEEEECCh
Confidence 4455679998876554433 8888999 999 988876544
No 296
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=24.60 E-value=1.7e+02 Score=22.35 Aligned_cols=49 Identities=14% Similarity=0.012 Sum_probs=32.0
Q ss_pred hCCcEEeccccccchhhHHHHHHhhc-ceEEEecCCCCccCHHHHHHHHHHHHcCC
Q 047833 369 HGVPIIGWPLAAEQFYNSKLLEEEIG-VCVEVARGKSSEVLKKDIAAKIELVMNET 423 (473)
Q Consensus 369 ~GvP~l~~P~~~DQ~~nA~~v~~~lG-~g~~l~~~~~~~~~~~~l~~~i~~ll~~~ 423 (473)
..+|+|++--..|..... ...+. | +--.+.+ .++.++|.++|++++...
T Consensus 75 ~~~~ii~~s~~~~~~~~~-~~~~~-g~~~~~l~K----P~~~~~L~~~i~~~l~~~ 124 (151)
T 3kcn_A 75 PNSVYLMLTGNQDLTTAM-EAVNE-GQVFRFLNK----PCQMSDIKAAINAGIKQY 124 (151)
T ss_dssp SSCEEEEEECGGGHHHHH-HHHHH-TCCSEEEES----SCCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEECCCCHHHHH-HHHHc-CCeeEEEcC----CCCHHHHHHHHHHHHHHH
Confidence 467777775544443333 33335 7 5444554 689999999999999855
No 297
>3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis}
Probab=24.30 E-value=1.6e+02 Score=28.08 Aligned_cols=32 Identities=9% Similarity=0.187 Sum_probs=21.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCC-cEEEEEc
Q 047833 4 RKETIVLFPFMAQGHIIPFLALALHLEKTNK-YTITFVN 41 (473)
Q Consensus 4 ~~~~il~~~~~~~GH~~p~l~La~~L~~~rG-h~Vt~~~ 41 (473)
.++||+++..+++. .+||+.|.+ .+ .+.+++.
T Consensus 20 ~~m~ilvlG~ggre-----~ala~~l~~-s~~v~~v~~~ 52 (442)
T 3lp8_A 20 GSMNVLVIGSGGRE-----HSMLHHIRK-STLLNKLFIA 52 (442)
T ss_dssp CCEEEEEEECSHHH-----HHHHHHHTT-CTTEEEEEEE
T ss_pred CCCEEEEECCChHH-----HHHHHHHHh-CCCCCEEEEE
Confidence 46799999877444 468999988 54 4444443
No 298
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=24.00 E-value=2.2e+02 Score=21.16 Aligned_cols=50 Identities=4% Similarity=-0.102 Sum_probs=30.5
Q ss_pred hCCcEEeccccccchhhHHHHHHhhcceEEEecCCCCccCHHHHHHHHHHHHcCC
Q 047833 369 HGVPIIGWPLAAEQFYNSKLLEEEIGVCVEVARGKSSEVLKKDIAAKIELVMNET 423 (473)
Q Consensus 369 ~GvP~l~~P~~~DQ~~nA~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~~~ 423 (473)
..+|+|++--..|.......+. .-|+--.+.+ .++.++|..+|++++...
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~~-~~ga~~~l~K----P~~~~~L~~~i~~~~~~~ 120 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAIN-DAGIHQFLTK----PWHPEQLLSSARNAARMF 120 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHHH-HTTCCEEEES----SCCHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHH-hhchhhhccC----CCCHHHHHHHHHHHHHHH
Confidence 3567777654444433333333 3145344544 688999999999988644
No 299
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=23.84 E-value=3.8e+02 Score=23.72 Aligned_cols=41 Identities=12% Similarity=0.061 Sum_probs=30.1
Q ss_pred HHHHHHHHhHhhhcCCCCccEEEECCCcc--hHHHHHHHhCCceEEEecc
Q 047833 100 PHFKKLVNDLIDEQNGYKPLCIITDMFFG--WCKEIAQEYGIFHAIFIGG 147 (473)
Q Consensus 100 ~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~--~~~~~A~~~giP~v~~~~~ 147 (473)
..+.+.+++. +..+|+++..+. .+..+|+..|++.+.+.+.
T Consensus 227 ~~l~~~ik~~-------~v~~If~e~~~~~~~~~~ia~~~g~~v~~ld~l 269 (291)
T 1pq4_A 227 KQLIDTAKEN-------NLTMVFGETQFSTKSSEAIAAEIGAGVELLDPL 269 (291)
T ss_dssp HHHHHHHHTT-------TCCEEEEETTSCCHHHHHHHHHHTCEEEEECTT
T ss_pred HHHHHHHHHc-------CCCEEEEeCCCChHHHHHHHHHcCCeEEEEcCc
Confidence 3445556666 889999987655 3457899999999887554
No 300
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=23.81 E-value=42 Score=28.60 Aligned_cols=32 Identities=22% Similarity=0.146 Sum_probs=25.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEc
Q 047833 4 RKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVN 41 (473)
Q Consensus 4 ~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~ 41 (473)
+|+||.|+-.|..| ..+|+.|.+ .||+|+++.
T Consensus 22 ~mmkI~IIG~G~mG-----~~la~~l~~-~g~~V~~v~ 53 (220)
T 4huj_A 22 SMTTYAIIGAGAIG-----SALAERFTA-AQIPAIIAN 53 (220)
T ss_dssp GSCCEEEEECHHHH-----HHHHHHHHH-TTCCEEEEC
T ss_pred cCCEEEEECCCHHH-----HHHHHHHHh-CCCEEEEEE
Confidence 36789998876555 468899999 999999854
No 301
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=23.79 E-value=44 Score=28.58 Aligned_cols=49 Identities=14% Similarity=0.042 Sum_probs=0.0
Q ss_pred hhccCCcceeEeccCcchHHHHH---------hhCCcEEecc---ccccchhhHHHHHHhhcc
Q 047833 345 ILSHRSVSVFLSHCGWNSVLEAL---------SHGVPIIGWP---LAAEQFYNSKLLEEEIGV 395 (473)
Q Consensus 345 ll~~~~v~~~I~HGG~gt~~eal---------~~GvP~l~~P---~~~DQ~~nA~~v~~~lG~ 395 (473)
+..+++. .++--||.||+-|.. .+++|++++- +|.+=..+-..+.+. |.
T Consensus 102 ~~~~sda-~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~gfw~~l~~~l~~~~~~-Gf 162 (216)
T 1ydh_A 102 MAQEAEA-FIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEE-GF 162 (216)
T ss_dssp HHHHCSE-EEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECGGGTTHHHHHHHHHHHHT-TS
T ss_pred HHHhCCE-EEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecCCccchHHHHHHHHHHHC-CC
No 302
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=23.77 E-value=95 Score=28.81 Aligned_cols=33 Identities=9% Similarity=-0.011 Sum_probs=25.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 6 ETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 6 ~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
.||+++..+ .....++++|++ .||+|.++.+..
T Consensus 2 ~~Ililg~g-----~~g~~~~~a~~~-~G~~v~~~~~~~ 34 (380)
T 3ax6_A 2 KKIGIIGGG-----QLGKMMTLEAKK-MGFYVIVLDPTP 34 (380)
T ss_dssp CEEEEECCS-----HHHHHHHHHHHH-TTCEEEEEESST
T ss_pred CEEEEECCC-----HHHHHHHHHHHH-CCCEEEEEeCCC
Confidence 478888764 235678889999 999999987644
No 303
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=23.60 E-value=1e+02 Score=22.94 Aligned_cols=37 Identities=8% Similarity=-0.018 Sum_probs=29.5
Q ss_pred CCcEEEEEcCCCccCHHH-HHHHHHHHHhCCCcEEEEEc
Q 047833 4 RKETIVLFPFMAQGHIIP-FLALALHLEKTNKYTITFVN 41 (473)
Q Consensus 4 ~~~~il~~~~~~~GH~~p-~l~La~~L~~~rGh~Vt~~~ 41 (473)
++.||+++|..+.|.-.- .-.|-+.+.+ .|.++.+-.
T Consensus 20 ~~kkIlvvC~sG~gTS~ll~~kl~~~~~~-~gi~~~V~~ 57 (113)
T 1tvm_A 20 SKRKIIVACGGAVATSTMAAEEIKELCQS-HNIPVELIQ 57 (113)
T ss_dssp SSEEEEEESCSCSSHHHHHHHHHHHHHHH-TTCCEEEEE
T ss_pred cccEEEEECCCCHHHHHHHHHHHHHHHHH-cCCeEEEEE
Confidence 467999999999998774 6778888989 999865543
No 304
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=23.52 E-value=74 Score=26.84 Aligned_cols=37 Identities=19% Similarity=0.128 Sum_probs=25.3
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEc
Q 047833 1 MAQRKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVN 41 (473)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~ 41 (473)
|+.-+-|+++++.++.| =-.++|++|.+ +|++|.+..
T Consensus 1 M~~~~~k~vlVTGas~g---IG~~~a~~l~~-~G~~V~~~~ 37 (223)
T 3uce_A 1 MMGSDKTVYVVLGGTSG---IGAELAKQLES-EHTIVHVAS 37 (223)
T ss_dssp ----CCEEEEEETTTSH---HHHHHHHHHCS-TTEEEEEES
T ss_pred CCCCCCCEEEEECCCCH---HHHHHHHHHHH-CCCEEEEec
Confidence 44334477788876654 34688999999 999998875
No 305
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=23.50 E-value=2.2e+02 Score=21.21 Aligned_cols=65 Identities=18% Similarity=0.040 Sum_probs=44.3
Q ss_pred hccCCcceeEeccCcch---------HHHHHhhCCcEEeccccccchhhHHHHHHhhcceEEEecCCCCccCHHHHHHHH
Q 047833 346 LSHRSVSVFLSHCGWNS---------VLEALSHGVPIIGWPLAAEQFYNSKLLEEEIGVCVEVARGKSSEVLKKDIAAKI 416 (473)
Q Consensus 346 l~~~~v~~~I~HGG~gt---------~~eal~~GvP~l~~P~~~DQ~~nA~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i 416 (473)
+..++ ++|--.|..| +..|...|+|++.+=.++.+. .-..+++. +. .+- .++.+.|.++|
T Consensus 36 I~~~~--~vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l~~~-a~--~iV-----~Wn~~~I~~aI 104 (111)
T 1eiw_A 36 PEDAD--AVIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPELEAV-SS--EVV-----GWNPHCIRDAL 104 (111)
T ss_dssp SSSCS--EEEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTHHHH-CS--EEE-----CSCHHHHHHHH
T ss_pred cccCC--EEEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHHHhh-Cc--eec-----cCCHHHHHHHH
Confidence 34555 4888888877 667888999999887666542 22225533 33 332 47889999999
Q ss_pred HHHHc
Q 047833 417 ELVMN 421 (473)
Q Consensus 417 ~~ll~ 421 (473)
+..++
T Consensus 105 ~~~~~ 109 (111)
T 1eiw_A 105 EDALD 109 (111)
T ss_dssp HHHHC
T ss_pred HhccC
Confidence 98765
No 306
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=23.39 E-value=76 Score=25.99 Aligned_cols=42 Identities=10% Similarity=0.108 Sum_probs=27.4
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 1 MAQRKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
|.+.+.+|+++...+.=.. =++.-...|++ .|++|+++++..
T Consensus 4 m~~t~~~v~il~~~gFe~~-E~~~p~~~l~~-ag~~V~~~s~~~ 45 (177)
T 4hcj_A 4 MGKTNNILYVMSGQNFQDE-EYFESKKIFES-AGYKTKVSSTFI 45 (177)
T ss_dssp -CCCCEEEEECCSEEECHH-HHHHHHHHHHH-TTCEEEEEESSS
T ss_pred cccCCCEEEEECCCCccHH-HHHHHHHHHHH-CCCEEEEEECCC
Confidence 5554545555554444333 35666788999 999999998655
No 307
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=23.32 E-value=68 Score=29.31 Aligned_cols=30 Identities=13% Similarity=0.130 Sum_probs=20.1
Q ss_pred CccEEEECCCcchHHHHHHHhCCceEEEec
Q 047833 117 KPLCIITDMFFGWCKEIAQEYGIFHAIFIG 146 (473)
Q Consensus 117 ~pD~Vv~d~~~~~~~~~A~~~giP~v~~~~ 146 (473)
+||+||..........--+..|||++.+.+
T Consensus 116 ~PDLIi~~~~~~~~~~~L~~~gipvv~~~~ 145 (335)
T 4hn9_A 116 TPDVVFLPMKLKKTADTLESLGIKAVVVNP 145 (335)
T ss_dssp CCSEEEEEGGGHHHHHHHHHTTCCEEEECC
T ss_pred CCCEEEEeCcchhHHHHHHHcCCCEEEEcC
Confidence 899999975422222333567999999753
No 308
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=23.32 E-value=76 Score=27.67 Aligned_cols=40 Identities=10% Similarity=0.096 Sum_probs=30.7
Q ss_pred CcEE-EEEcC-CCccCHHHHHHHHHHHHhCCCcEEEEEcCCcc
Q 047833 5 KETI-VLFPF-MAQGHIIPFLALALHLEKTNKYTITFVNTPLN 45 (473)
Q Consensus 5 ~~~i-l~~~~-~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~ 45 (473)
|+++ ++++. |+-|=-.-...||..|.+ +|++|.++=....
T Consensus 17 ~~~vI~v~s~kGGvGKTT~a~nLA~~la~-~G~~VlliD~D~~ 58 (262)
T 2ph1_A 17 IKSRIAVMSGKGGVGKSTVTALLAVHYAR-QGKKVGILDADFL 58 (262)
T ss_dssp CSCEEEEECSSSCTTHHHHHHHHHHHHHH-TTCCEEEEECCSS
T ss_pred CCeEEEEEcCCCCCCHHHHHHHHHHHHHH-CCCeEEEEeCCCC
Confidence 3444 44443 677899999999999999 9999999865543
No 309
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=23.27 E-value=88 Score=27.52 Aligned_cols=33 Identities=18% Similarity=0.080 Sum_probs=25.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 047833 6 ETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNT 42 (473)
Q Consensus 6 ~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~ 42 (473)
-|+++++.++.| =-.++|+.|.+ +|++|+++.-
T Consensus 10 ~k~~lVTGas~g---IG~a~a~~l~~-~G~~V~~~~r 42 (281)
T 3s55_A 10 GKTALITGGARG---MGRSHAVALAE-AGADIAICDR 42 (281)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHH-TTCEEEEEEC
T ss_pred CCEEEEeCCCch---HHHHHHHHHHH-CCCeEEEEeC
Confidence 367778877654 34688999999 9999998764
No 310
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=23.10 E-value=1.2e+02 Score=22.37 Aligned_cols=36 Identities=17% Similarity=0.175 Sum_probs=25.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEc
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVN 41 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~ 41 (473)
|.||+++|..+.|-=.-.-.+=+.+.+ +|.++.+..
T Consensus 3 mkkIll~Cg~G~sTS~l~~k~~~~~~~-~gi~~~i~a 38 (106)
T 1e2b_A 3 KKHIYLFSSAGMSTSLLVSKMRAQAEK-YEVPVIIEA 38 (106)
T ss_dssp CEEEEEECSSSTTTHHHHHHHHHHHHH-SCCSEEEEE
T ss_pred CcEEEEECCCchhHHHHHHHHHHHHHH-CCCCeEEEE
Confidence 458999988766544444578888888 998876644
No 311
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=22.99 E-value=94 Score=27.34 Aligned_cols=33 Identities=21% Similarity=0.220 Sum_probs=25.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 047833 6 ETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNT 42 (473)
Q Consensus 6 ~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~ 42 (473)
-|+++++.++.| =-..+|+.|.+ +|++|+++.-
T Consensus 10 gk~vlVTGas~g---IG~~ia~~l~~-~G~~V~~~~~ 42 (287)
T 3pxx_A 10 DKVVLVTGGARG---QGRSHAVKLAE-EGADIILFDI 42 (287)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHH-TTCEEEEEEC
T ss_pred CCEEEEeCCCCh---HHHHHHHHHHH-CCCeEEEEcc
Confidence 467778877654 34688999999 9999998864
No 312
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=22.99 E-value=1.5e+02 Score=23.79 Aligned_cols=44 Identities=7% Similarity=0.018 Sum_probs=31.1
Q ss_pred HhhhHHHHHHHHhHhhhcCCCCccEEEECCCcch---------------HHHHHHHhCCceEEEec
Q 047833 96 LSFKPHFKKLVNDLIDEQNGYKPLCIITDMFFGW---------------CKEIAQEYGIFHAIFIG 146 (473)
Q Consensus 96 ~~~~~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~~---------------~~~~A~~~giP~v~~~~ 146 (473)
....+.+.+++++. +||.+..+..++. ...++...|||+.-+.|
T Consensus 45 ~~i~~~l~~~i~~~-------~Pd~vaiE~vf~~~n~~s~~~lgqarGv~~~a~~~~~ipv~eytp 103 (158)
T 1hjr_A 45 KLIYAGVTEIITQF-------QPDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQELPVFEYAA 103 (158)
T ss_dssp HHHHHHHHHHHHHH-------CCSEEEEEECCCCCCTTTHHHHHHHHHHHHHHHHTTTCCEEEEEH
T ss_pred HHHHHHHHHHHHHc-------CCCEEEEeecccccChHHHHHHHHHHHHHHHHHHHcCCCEEEECH
Confidence 34456678889999 9999888854431 12566778999888754
No 313
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=22.93 E-value=1.3e+02 Score=28.89 Aligned_cols=33 Identities=18% Similarity=0.191 Sum_probs=26.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 047833 4 RKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNT 42 (473)
Q Consensus 4 ~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~ 42 (473)
+..||+|+..|..| +++|+.|.+ +||+|+..=.
T Consensus 8 ~~k~v~viG~G~sG-----~s~A~~l~~-~G~~V~~~D~ 40 (451)
T 3lk7_A 8 ENKKVLVLGLARSG-----EAAARLLAK-LGAIVTVNDG 40 (451)
T ss_dssp TTCEEEEECCTTTH-----HHHHHHHHH-TTCEEEEEES
T ss_pred CCCEEEEEeeCHHH-----HHHHHHHHh-CCCEEEEEeC
Confidence 34689999887654 356999999 9999999754
No 314
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=22.90 E-value=1.5e+02 Score=18.57 Aligned_cols=52 Identities=17% Similarity=0.135 Sum_probs=32.9
Q ss_pred CCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhcccccccCCcHHHHHHHHHHHHHh
Q 047833 403 KSSEVLKKDIAAKIELVMNETEKGIELRKNAYEVREIIKNAFKNEENFQGSSVKAMNQFLNAASM 467 (473)
Q Consensus 403 ~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 467 (473)
+++.++.+++...+..+-.. -...++.+.++.. ..++......++|+..++.
T Consensus 13 ~~G~i~~~e~~~~l~~~~~~--------~~~~~~~~~~~~~-----D~~~~g~i~~~ef~~~~~~ 64 (66)
T 3li6_A 13 GDGAVSYEEVKAFVSKKRAI--------KNEQLLQLIFKSI-----DADGNGEIDQNEFAKFYGS 64 (66)
T ss_dssp CSSSCCHHHHHHHHHHHHHH--------HHHHHHHHHHHHH-----CTTCSSSCCHHHHHHHHTC
T ss_pred CCCcccHHHHHHHHHHccCC--------CcHHHHHHHHHHH-----CCCCCCCCCHHHHHHHHHh
Confidence 45789999999988876321 2223445555544 4455556778888877654
No 315
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=22.79 E-value=55 Score=28.75 Aligned_cols=41 Identities=12% Similarity=-0.001 Sum_probs=30.9
Q ss_pred CCcEEEEEcCC---CccCHHHHHHHHHHHHhCCCcEEEEEcCCcc
Q 047833 4 RKETIVLFPFM---AQGHIIPFLALALHLEKTNKYTITFVNTPLN 45 (473)
Q Consensus 4 ~~~~il~~~~~---~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~ 45 (473)
+++|.+|++.| +.|-=.-.-.|+.-|++ ||++|+.+=-.++
T Consensus 21 ~~mKyIfVTGGVvSglGKGi~aaSlG~LLk~-rG~~Vt~~KiDPY 64 (294)
T 2c5m_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKS-CGLHVTSIKIDPY 64 (294)
T ss_dssp CCCEEEEEEECSSTTSCHHHHHHHHHHHHHT-TTCCEECCEEECB
T ss_pred eceEEEEEcCccccccchHHHHHHHHHHHHH-CCCeeEEEecCCc
Confidence 35688888876 44555667889999999 9999998654443
No 316
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=22.79 E-value=1.1e+02 Score=27.22 Aligned_cols=38 Identities=11% Similarity=-0.040 Sum_probs=27.2
Q ss_pred cEEEEEcCCCc-cCHH---HHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 6 ETIVLFPFMAQ-GHII---PFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 6 ~~il~~~~~~~-GH~~---p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
+||+++..+.. -|-. ....++++|++ +||+|.++....
T Consensus 3 ~~i~il~gg~s~e~~~s~~~~~~l~~al~~-~G~~v~~~~~~~ 44 (306)
T 1iow_A 3 DKIAVLLGGTSAEREVSLNSGAAVLAGLRE-GGIDAYPVDPKE 44 (306)
T ss_dssp CEEEEECCCSSTTHHHHHHHHHHHHHHHHH-TTCEEEEECTTT
T ss_pred cEEEEEeCCCCccceEcHHhHHHHHHHHHH-CCCeEEEEecCc
Confidence 57888875432 2222 34679999999 999999997653
No 317
>3u9t_A MCC alpha, methylcrotonyl-COA carboxylase, alpha-subunit; biotin carboxylase, carboxyltransferase, BT domain, BCCP DOM ligase; 2.90A {Pseudomonas aeruginosa} PDB: 3u9s_A
Probab=22.71 E-value=2e+02 Score=29.38 Aligned_cols=34 Identities=9% Similarity=0.061 Sum_probs=25.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcc
Q 047833 6 ETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLN 45 (473)
Q Consensus 6 ~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~ 45 (473)
.||+++.. |.+ .+++++++++ .|++++.+.....
T Consensus 29 ~kILI~g~---Gei--a~~iiraar~-lGi~~vav~s~~d 62 (675)
T 3u9t_A 29 QRLLVANR---GEI--ACRVMRSARA-LGIGSVAVHSDID 62 (675)
T ss_dssp SEEEECCC---HHH--HHHHHHHHHH-HTCEEEEEECSGG
T ss_pred CEEEEECC---CHH--HHHHHHHHHH-CCCEEEEEECCCC
Confidence 46777653 333 7889999999 9999998865554
No 318
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=22.71 E-value=67 Score=29.43 Aligned_cols=37 Identities=11% Similarity=0.171 Sum_probs=26.3
Q ss_pred CcEEEEEcCCCccCHH----HHHHHHHHHHhCCCcEEEEEcC
Q 047833 5 KETIVLFPFMAQGHII----PFLALALHLEKTNKYTITFVNT 42 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~----p~l~La~~L~~~rGh~Vt~~~~ 42 (473)
++||+++..|..+-.. ....++++|.+ .||+|+.+..
T Consensus 3 ~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~-~g~~v~~i~~ 43 (343)
T 1e4e_A 3 RIKVAILFGGCSEEHDVSVKSAIEIAANINK-EKYEPLYIGI 43 (343)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHSCT-TTEEEEEEEE
T ss_pred CcEEEEEeCCCCCCcchhHHHHHHHHHHhhh-cCCEEEEEEE
Confidence 4688877754333322 45678999999 9999999864
No 319
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=22.67 E-value=3.8e+02 Score=23.26 Aligned_cols=30 Identities=20% Similarity=0.098 Sum_probs=20.1
Q ss_pred CccEEEECCCcch----HHHHHHHhCCceEEEec
Q 047833 117 KPLCIITDMFFGW----CKEIAQEYGIFHAIFIG 146 (473)
Q Consensus 117 ~pD~Vv~d~~~~~----~~~~A~~~giP~v~~~~ 146 (473)
++|.||....... ....+...|||+|.+..
T Consensus 61 ~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~ 94 (305)
T 3g1w_A 61 NPAGIAISAIDPVELTDTINKAVDAGIPIVLFDS 94 (305)
T ss_dssp CCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESS
T ss_pred CCCEEEEcCCCHHHHHHHHHHHHHCCCcEEEECC
Confidence 7899887754432 23345567999999743
No 320
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=22.62 E-value=81 Score=27.25 Aligned_cols=36 Identities=3% Similarity=-0.076 Sum_probs=25.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 047833 4 RKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTP 43 (473)
Q Consensus 4 ~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~ 43 (473)
.|.|.++++.++.| =-.++|+.|.+ +|++|+++.-.
T Consensus 20 ~m~k~vlITGas~g---IG~~la~~l~~-~G~~V~~~~r~ 55 (251)
T 3orf_A 20 HMSKNILVLGGSGA---LGAEVVKFFKS-KSWNTISIDFR 55 (251)
T ss_dssp --CCEEEEETTTSH---HHHHHHHHHHH-TTCEEEEEESS
T ss_pred ccCCEEEEECCCCH---HHHHHHHHHHH-CCCEEEEEeCC
Confidence 35567777766543 34688999999 99999888643
No 321
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=22.59 E-value=1.1e+02 Score=26.88 Aligned_cols=32 Identities=9% Similarity=-0.100 Sum_probs=26.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 047833 7 TIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNT 42 (473)
Q Consensus 7 ~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~ 42 (473)
|+++++.++.| =-.++|+.|.+ +|++|.+..-
T Consensus 12 K~alVTGas~G---IG~aia~~la~-~Ga~V~~~~r 43 (261)
T 4h15_A 12 KRALITAGTKG---AGAATVSLFLE-LGAQVLTTAR 43 (261)
T ss_dssp CEEEESCCSSH---HHHHHHHHHHH-TTCEEEEEES
T ss_pred CEEEEeccCcH---HHHHHHHHHHH-cCCEEEEEEC
Confidence 78899988776 34688999999 9999988753
No 322
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=22.56 E-value=86 Score=27.85 Aligned_cols=32 Identities=16% Similarity=0.090 Sum_probs=25.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEc
Q 047833 6 ETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVN 41 (473)
Q Consensus 6 ~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~ 41 (473)
-|+++++.++.| =-..+|+.|.+ +|++|+++.
T Consensus 9 ~k~~lVTGas~G---IG~aia~~la~-~G~~V~~~~ 40 (291)
T 1e7w_A 9 VPVALVTGAAKR---LGRSIAEGLHA-EGYAVCLHY 40 (291)
T ss_dssp CCEEEETTCSSH---HHHHHHHHHHH-TTCEEEEEE
T ss_pred CCEEEEECCCch---HHHHHHHHHHH-CCCeEEEEc
Confidence 367788877654 35689999999 999999986
No 323
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=22.49 E-value=81 Score=25.53 Aligned_cols=38 Identities=13% Similarity=0.244 Sum_probs=28.2
Q ss_pred cEEEEEcCCCc---cCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 6 ETIVLFPFMAQ---GHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 6 ~~il~~~~~~~---GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
.+|+++|+=+. ---+++-.|++.|++ +|.+|.|..++-
T Consensus 24 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~-~G~~V~faIHPV 64 (180)
T 1pno_A 24 SKVIIVPGYGMAVAQAQHALREMADVLKK-EGVEVSYAIHPV 64 (180)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHH-TTCEEEEEECTT
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHH-CCCeEEEEeccc
Confidence 36777764211 124678899999999 999999998765
No 324
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=22.48 E-value=1.4e+02 Score=22.44 Aligned_cols=31 Identities=13% Similarity=0.095 Sum_probs=20.0
Q ss_pred CccEEEECCCcc--hHHHHHHHh-------CCceEEEecc
Q 047833 117 KPLCIITDMFFG--WCKEIAQEY-------GIFHAIFIGG 147 (473)
Q Consensus 117 ~pD~Vv~d~~~~--~~~~~A~~~-------giP~v~~~~~ 147 (473)
.||+||.|...+ .+..+.+.+ .+|.+.++..
T Consensus 47 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 86 (138)
T 3c3m_A 47 PPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAK 86 (138)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESS
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECC
Confidence 799999997654 344333332 5788887543
No 325
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=22.44 E-value=98 Score=27.31 Aligned_cols=33 Identities=15% Similarity=0.187 Sum_probs=25.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 047833 6 ETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNT 42 (473)
Q Consensus 6 ~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~ 42 (473)
-|+++++.++.| =-.++|+.|.+ +|++|+++..
T Consensus 29 ~k~~lVTGas~G---IG~aia~~la~-~G~~V~~~~~ 61 (280)
T 4da9_A 29 RPVAIVTGGRRG---IGLGIARALAA-SGFDIAITGI 61 (280)
T ss_dssp CCEEEEETTTSH---HHHHHHHHHHH-TTCEEEEEES
T ss_pred CCEEEEecCCCH---HHHHHHHHHHH-CCCeEEEEeC
Confidence 367778776653 34688999999 9999999863
No 326
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=22.43 E-value=1.4e+02 Score=22.96 Aligned_cols=106 Identities=14% Similarity=0.193 Sum_probs=60.4
Q ss_pred CHHHHHHHHHHHHhCCCceEEEECCCCCCCccccccccCCcEEEeccc-ChHHhhccCCcceeEeccCcchHHHHHh---
Q 047833 293 ATSQMMQLAMALEASGKNFIWVVRPPIGFDINSEIKCSGQGLVVHKWA-PQVEILSHRSVSVFLSHCGWNSVLEALS--- 368 (473)
Q Consensus 293 ~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~nv~~~~~v-p~~~ll~~~~v~~~I~HGG~gt~~eal~--- 368 (473)
.+.....+...|+..|+..+.....+. .........+..+++.+|. |..+ |. .+++.+.
T Consensus 21 ~~~~r~~l~~~L~~~G~~~v~~a~~g~--~al~~~~~~~~DlillD~~MP~md--------------G~-el~~~ir~~~ 83 (134)
T 3to5_A 21 FSTMRRIVKNLLRDLGFNNTQEADDGL--TALPMLKKGDFDFVVTDWNMPGMQ--------------GI-DLLKNIRADE 83 (134)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEESSHH--HHHHHHHHHCCSEEEEESCCSSSC--------------HH-HHHHHHHHST
T ss_pred CHHHHHHHHHHHHHcCCcEEEEECCHH--HHHHHHHhCCCCEEEEcCCCCCCC--------------HH-HHHHHHHhCC
Confidence 344444566777788887665543220 0101112234456666653 3211 11 3334443
Q ss_pred --hCCcEEeccccccchhhHHHHHHhhcceEEEecCCCCccCHHHHHHHHHHHHc
Q 047833 369 --HGVPIIGWPLAAEQFYNSKLLEEEIGVCVEVARGKSSEVLKKDIAAKIELVMN 421 (473)
Q Consensus 369 --~GvP~l~~P~~~DQ~~nA~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~ 421 (473)
..+|+|++--..+.. ...+..+. |+--.+.+ -++.++|.++|+++++
T Consensus 84 ~~~~ipvI~lTa~~~~~-~~~~~~~~-Ga~~yl~K----P~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 84 ELKHLPVLMITAEAKRE-QIIEAAQA-GVNGYIVK----PFTAATLKEKLDKIFE 132 (134)
T ss_dssp TTTTCCEEEEESSCCHH-HHHHHHHT-TCCEEEES----SCCHHHHHHHHHHHCC
T ss_pred CCCCCeEEEEECCCCHH-HHHHHHHC-CCCEEEEC----CCCHHHHHHHHHHHHh
Confidence 468988886555444 44444546 88777776 6899999999999875
No 327
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=22.34 E-value=1.2e+02 Score=24.69 Aligned_cols=40 Identities=5% Similarity=0.003 Sum_probs=32.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 4 RKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 4 ~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
+|..+.++...+.|-..=+..|+..|.+ +|++|.++....
T Consensus 3 ~~~~i~i~G~sGsGKTTl~~~L~~~l~~-~g~~v~~ik~~~ 42 (169)
T 1xjc_A 3 AMNVWQVVGYKHSGKTTLMEKWVAAAVR-EGWRVGTVKHHG 42 (169)
T ss_dssp -CCEEEEECCTTSSHHHHHHHHHHHHHH-TTCCEEEEECCC
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHhhHh-cCCeeeEEEeCC
Confidence 3445667777788998889999999999 999999887554
No 328
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=22.33 E-value=1e+02 Score=26.64 Aligned_cols=34 Identities=15% Similarity=0.092 Sum_probs=24.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 7 TIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 7 ~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
+.++++.++.| =-..+++.|.+ +|++|+++.-..
T Consensus 8 k~vlITGasgg---iG~~la~~l~~-~G~~V~~~~r~~ 41 (264)
T 2pd6_A 8 ALALVTGAGSG---IGRAVSVRLAG-EGATVAACDLDR 41 (264)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHH-TTCEEEEEESSH
T ss_pred CEEEEECCCCh---HHHHHHHHHHH-CCCEEEEEeCCh
Confidence 56666655443 23578999999 999999986443
No 329
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=22.32 E-value=87 Score=27.40 Aligned_cols=36 Identities=14% Similarity=0.098 Sum_probs=28.0
Q ss_pred CcEEEEEcCC-CccCHHHHHHHHHHHHhCCCcEEEEEc
Q 047833 5 KETIVLFPFM-AQGHIIPFLALALHLEKTNKYTITFVN 41 (473)
Q Consensus 5 ~~~il~~~~~-~~GH~~p~l~La~~L~~~rGh~Vt~~~ 41 (473)
|..|++.... .-|-..-.+.|++.|++ +|++|.++=
T Consensus 26 m~~i~Itgt~t~vGKT~vt~gL~~~l~~-~G~~V~~fK 62 (251)
T 3fgn_A 26 MTILVVTGTGTGVGKTVVCAALASAARQ-AGIDVAVCK 62 (251)
T ss_dssp CEEEEEEESSTTSCHHHHHHHHHHHHHH-TTCCEEEEE
T ss_pred CCEEEEEeCCCCCcHHHHHHHHHHHHHH-CCCeEEEEe
Confidence 3445555444 56888999999999999 999999973
No 330
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=22.25 E-value=41 Score=30.43 Aligned_cols=33 Identities=6% Similarity=0.045 Sum_probs=26.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 047833 4 RKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNT 42 (473)
Q Consensus 4 ~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~ 42 (473)
++.+|+++-.|..| +..|..|++ +||+|+++-.
T Consensus 21 ~~~~vvIIG~G~aG-----l~aA~~l~~-~g~~v~vie~ 53 (338)
T 3itj_A 21 VHNKVTIIGSGPAA-----HTAAIYLAR-AEIKPILYEG 53 (338)
T ss_dssp CEEEEEEECCSHHH-----HHHHHHHHH-TTCCCEEECC
T ss_pred CCCCEEEECcCHHH-----HHHHHHHHH-CCCCEEEEec
Confidence 35688888777444 788999999 9999999854
No 331
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=22.19 E-value=82 Score=25.59 Aligned_cols=37 Identities=19% Similarity=0.267 Sum_probs=27.8
Q ss_pred EEEEEcCCCc---cCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 7 TIVLFPFMAQ---GHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 7 ~il~~~~~~~---GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
+|+++|+=+. ---+++-.|++.|++ +|.+|.|..+|-
T Consensus 24 ~ViIvPGYGmAvAqAQ~~v~el~~~L~~-~G~~V~faIHPV 63 (184)
T 1d4o_A 24 SIIITPGYGLCAAKAQYPIADLVKMLSE-QGKKVRFGIHPV 63 (184)
T ss_dssp EEEEEECHHHHHTTTHHHHHHHHHHHHH-TTCEEEEEECTT
T ss_pred eEEEECChHHHHHHHHHHHHHHHHHHHH-CCCeEEEEeccc
Confidence 6777764211 124678899999999 999999998765
No 332
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=22.10 E-value=1.2e+02 Score=25.80 Aligned_cols=40 Identities=15% Similarity=0.138 Sum_probs=28.9
Q ss_pred CCCcEEEEEcCCCccCH----HHHHHHHHHHHhCCCcEEEEEcCC
Q 047833 3 QRKETIVLFPFMAQGHI----IPFLALALHLEKTNKYTITFVNTP 43 (473)
Q Consensus 3 ~~~~~il~~~~~~~GH~----~p~l~La~~L~~~rGh~Vt~~~~~ 43 (473)
++|.+|.+++....+.- .-...|++.|.+ +|+.|+.-+..
T Consensus 11 ~~m~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~-~G~~vVsGGg~ 54 (215)
T 2a33_A 11 SKFRRICVFCGSSQGKKSSYQDAAVDLGNELVS-RNIDLVYGGGS 54 (215)
T ss_dssp CSCSEEEEECCSSCCSSHHHHHHHHHHHHHHHH-TTCEEEECCCS
T ss_pred CCCCeEEEEECCCCCCchHHHHHHHHHHHHHHH-CCCEEEECCCh
Confidence 34667999977666532 345678899999 99999876655
No 333
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=22.01 E-value=90 Score=30.01 Aligned_cols=42 Identities=10% Similarity=0.147 Sum_probs=33.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhh
Q 047833 7 TIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLRK 48 (473)
Q Consensus 7 ~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~~ 48 (473)
-+++...++.|-..-.+.+|..+....|..|.|++.+...+.
T Consensus 205 liiI~G~pG~GKTtl~l~ia~~~~~~~g~~Vl~~s~E~s~~~ 246 (454)
T 2r6a_A 205 LIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQQ 246 (454)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEEESSSCHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHhCCCcEEEEECCCCHHH
Confidence 456777789999999999999887415889999997765443
No 334
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=21.96 E-value=2.3e+02 Score=25.56 Aligned_cols=30 Identities=13% Similarity=0.081 Sum_probs=23.8
Q ss_pred CccEEEECCCcch--HHHHHHHhCCceEEEec
Q 047833 117 KPLCIITDMFFGW--CKEIAQEYGIFHAIFIG 146 (473)
Q Consensus 117 ~pD~Vv~d~~~~~--~~~~A~~~giP~v~~~~ 146 (473)
+..+|+++..+.. +..+|+..|++.+.+.+
T Consensus 239 ~v~~If~e~~~~~~~~~~ia~e~g~~v~~l~~ 270 (312)
T 2o1e_A 239 NVKVIYFEEIASSKVADTLASEIGAKTEVLNT 270 (312)
T ss_dssp CCCEEECSSCCCHHHHHHHHHHTCCEEECCCC
T ss_pred CCCEEEEeCCCChHHHHHHHHHhCCcEEEecc
Confidence 7899999976663 45789999999887643
No 335
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=21.92 E-value=1.7e+02 Score=23.99 Aligned_cols=40 Identities=10% Similarity=-0.022 Sum_probs=30.0
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 3 QRKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 3 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
.++.||+++.+++.. ..-+......|.+ .|++|+++++..
T Consensus 21 ~~~~kV~ill~~g~~-~~e~~~~~~~l~~-ag~~v~~vs~~~ 60 (193)
T 1oi4_A 21 GLSKKIAVLITDEFE-DSEFTSPADEFRK-AGHEVITIEKQA 60 (193)
T ss_dssp TCCCEEEEECCTTBC-THHHHHHHHHHHH-TTCEEEEEESST
T ss_pred ccCCEEEEEECCCCC-HHHHHHHHHHHHH-CCCEEEEEECCC
Confidence 346689888876544 3445667888999 999999998665
No 336
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=21.86 E-value=1e+02 Score=26.74 Aligned_cols=34 Identities=12% Similarity=-0.030 Sum_probs=25.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 047833 6 ETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTP 43 (473)
Q Consensus 6 ~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~ 43 (473)
-|.++++.++.| =-.++|++|.+ +|++|++..-.
T Consensus 8 gk~~lVTGas~g---IG~a~a~~l~~-~G~~V~~~~r~ 41 (255)
T 4eso_A 8 GKKAIVIGGTHG---MGLATVRRLVE-GGAEVLLTGRN 41 (255)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHHH-TTCEEEEEESC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHH-CCCEEEEEeCC
Confidence 367777776654 34688999999 99999988643
No 337
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=21.85 E-value=1.6e+02 Score=21.40 Aligned_cols=47 Identities=11% Similarity=0.141 Sum_probs=33.2
Q ss_pred hCCcEEeccccccchhhHHHHHHhhcceEEEecCCCCccCHHHHHHHHHHHHc
Q 047833 369 HGVPIIGWPLAAEQFYNSKLLEEEIGVCVEVARGKSSEVLKKDIAAKIELVMN 421 (473)
Q Consensus 369 ~GvP~l~~P~~~DQ~~nA~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ll~ 421 (473)
..+|++++--..+ .....+..+. |+--.+.+ .++.++|.++|+++++
T Consensus 75 ~~~pii~~s~~~~-~~~~~~~~~~-Ga~~~l~K----P~~~~~L~~~i~~~l~ 121 (122)
T 3gl9_A 75 KRIPVIVLTAKGG-EEDESLALSL-GARKVMRK----PFSPSQFIEEVKHLLN 121 (122)
T ss_dssp TTSCEEEEESCCS-HHHHHHHHHT-TCSEEEES----SCCHHHHHHHHHHHHC
T ss_pred cCCCEEEEecCCc-hHHHHHHHhc-ChhhhccC----CCCHHHHHHHHHHHhc
Confidence 3678887765444 3444455546 87767765 6899999999999876
No 338
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=21.82 E-value=84 Score=28.55 Aligned_cols=40 Identities=5% Similarity=-0.135 Sum_probs=32.3
Q ss_pred CCcEEEEEcC-CCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 4 RKETIVLFPF-MAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 4 ~~~~il~~~~-~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
+++||+-++. |+-|=-+-.+.||.+|++ .|++|.++-..+
T Consensus 46 ~~aKVIAIaGKGGVGKTTtavNLA~aLA~-~GkkVllID~Dp 86 (314)
T 3fwy_A 46 TGAKVFAVYGKGGIGKSTTSSNLSAAFSI-LGKRVLQIGCDP 86 (314)
T ss_dssp -CCEEEEEECSTTSSHHHHHHHHHHHHHH-TTCCEEEEEESS
T ss_pred CCceEEEEECCCccCHHHHHHHHHHHHHH-CCCeEEEEecCC
Confidence 3567764444 788999999999999999 999999987554
No 339
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=21.77 E-value=1.1e+02 Score=25.22 Aligned_cols=37 Identities=11% Similarity=0.209 Sum_probs=25.9
Q ss_pred CcEEEEEcCCCccCHHHHH-HHHHHHHhCCCcEEEEEcC
Q 047833 5 KETIVLFPFMAQGHIIPFL-ALALHLEKTNKYTITFVNT 42 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l-~La~~L~~~rGh~Vt~~~~ 42 (473)
|+||+++.+...|+..-+. .+++.|.+ .|++|.++--
T Consensus 5 M~kilii~~S~~g~T~~la~~i~~~l~~-~g~~v~~~~l 42 (200)
T 2a5l_A 5 SPYILVLYYSRHGATAEMARQIARGVEQ-GGFEARVRTV 42 (200)
T ss_dssp CCEEEEEECCSSSHHHHHHHHHHHHHHH-TTCEEEEEBC
T ss_pred cceEEEEEeCCCChHHHHHHHHHHHHhh-CCCEEEEEEh
Confidence 4578766555577765554 46777888 8999988753
No 340
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=21.75 E-value=1.1e+02 Score=26.88 Aligned_cols=35 Identities=11% Similarity=0.168 Sum_probs=25.7
Q ss_pred cEEEEEcCCC--ccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 6 ETIVLFPFMA--QGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 6 ~~il~~~~~~--~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
-|.++++.++ .| + -..+|+.|.+ +|++|+++.-..
T Consensus 26 ~k~vlVTGasg~~G-I--G~~ia~~l~~-~G~~V~~~~r~~ 62 (280)
T 3nrc_A 26 GKKILITGLLSNKS-I--AYGIAKAMHR-EGAELAFTYVGQ 62 (280)
T ss_dssp TCEEEECCCCSTTC-H--HHHHHHHHHH-TTCEEEEEECTT
T ss_pred CCEEEEECCCCCCC-H--HHHHHHHHHH-cCCEEEEeeCch
Confidence 3677777754 22 2 3678999999 999999987655
No 341
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=21.75 E-value=79 Score=26.57 Aligned_cols=33 Identities=18% Similarity=0.241 Sum_probs=25.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 047833 4 RKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNT 42 (473)
Q Consensus 4 ~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~ 42 (473)
.+++|.++..|..| ..+|..|.+ +||+|+++..
T Consensus 18 ~~~~I~iiG~G~mG-----~~la~~l~~-~g~~V~~~~~ 50 (209)
T 2raf_A 18 QGMEITIFGKGNMG-----QAIGHNFEI-AGHEVTYYGS 50 (209)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHH-TTCEEEEECT
T ss_pred CCCEEEEECCCHHH-----HHHHHHHHH-CCCEEEEEcC
Confidence 35688888776555 567889999 9999999853
No 342
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=21.60 E-value=48 Score=30.76 Aligned_cols=32 Identities=28% Similarity=0.198 Sum_probs=26.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 7 TIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 7 ~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
||.|+..|..| ..+|..|.+ .||+|+++....
T Consensus 17 kI~iIG~G~mG-----~~la~~L~~-~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFG-----TALAMVLSK-KCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHH-----HHHHHHHTT-TEEEEEEECSCH
T ss_pred eEEEECCCHHH-----HHHHHHHHh-CCCEEEEEECCH
Confidence 89999887666 467899999 999999986543
No 343
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=21.44 E-value=51 Score=29.02 Aligned_cols=35 Identities=17% Similarity=0.161 Sum_probs=25.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcc
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLN 45 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~ 45 (473)
|+||+++. + |.+- ..|+++|.+ +||+|+.++-...
T Consensus 5 ~~~ilVtG--a-G~iG--~~l~~~L~~-~g~~V~~~~r~~~ 39 (286)
T 3ius_A 5 TGTLLSFG--H-GYTA--RVLSRALAP-QGWRIIGTSRNPD 39 (286)
T ss_dssp CCEEEEET--C-CHHH--HHHHHHHGG-GTCEEEEEESCGG
T ss_pred cCcEEEEC--C-cHHH--HHHHHHHHH-CCCEEEEEEcChh
Confidence 45777764 5 6554 467899999 9999999985543
No 344
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=21.39 E-value=89 Score=27.00 Aligned_cols=35 Identities=9% Similarity=0.008 Sum_probs=23.6
Q ss_pred HHHHhHhhhcCCCCccEEEECCCcch--HHHHHHHhCCceEEEe
Q 047833 104 KLVNDLIDEQNGYKPLCIITDMFFGW--CKEIAQEYGIFHAIFI 145 (473)
Q Consensus 104 ~~l~~~~~~~~~~~pD~Vv~d~~~~~--~~~~A~~~giP~v~~~ 145 (473)
+.+..+ +||+||....... ...--+..|||++.+.
T Consensus 53 E~i~~l-------~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 53 EGILAM-------KPTMLLVSELAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp HHHHTT-------CCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred HHHHcc-------CCCEEEEcCCcCchhHHHHHHHcCCcEEEeC
Confidence 445566 8999999865431 2233356799999874
No 345
>2ip4_A PURD, phosphoribosylamine--glycine ligase; GAR synthetase, purine nucleotid structural genomics, NPPSFA; 2.80A {Thermus thermophilus}
Probab=21.31 E-value=5e+02 Score=24.12 Aligned_cols=32 Identities=6% Similarity=0.000 Sum_probs=23.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 047833 6 ETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNT 42 (473)
Q Consensus 6 ~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~ 42 (473)
+||+++..++ ...++++.|+++.|++++++.+
T Consensus 1 mkililG~g~-----r~~a~a~~l~~~~g~~~v~~~~ 32 (417)
T 2ip4_A 1 MKVLVVGSGG-----REHALLWKAAQSPRVKRLYAAP 32 (417)
T ss_dssp CEEEEEESSH-----HHHHHHHHHHTCSSCCEEEEEE
T ss_pred CEEEEECCCH-----HHHHHHHHHHhCCCCCEEEEEC
Confidence 3788888773 3678889886526888887753
No 346
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=21.28 E-value=3.4e+02 Score=23.27 Aligned_cols=31 Identities=16% Similarity=-0.036 Sum_probs=21.0
Q ss_pred CccEEEEC-CCcc-hHHHHHHHhCCceEEEecc
Q 047833 117 KPLCIITD-MFFG-WCKEIAQEYGIFHAIFIGG 147 (473)
Q Consensus 117 ~pD~Vv~d-~~~~-~~~~~A~~~giP~v~~~~~ 147 (473)
.||+||.- +..- .+..=|.++|||+|.+.-+
T Consensus 157 ~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaivDT 189 (231)
T 3bbn_B 157 LPDIVIIVDQQEEYTALRECITLGIPTICLIDT 189 (231)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEECCCS
T ss_pred CCCEEEEeCCccccHHHHHHHHhCCCEEEEecC
Confidence 38887654 3322 3556678899999998543
No 347
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=21.19 E-value=1e+02 Score=26.54 Aligned_cols=34 Identities=15% Similarity=0.029 Sum_probs=24.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 7 TIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 7 ~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
|.++++.++.| =-..+|+.|.+ +|++|+++.-..
T Consensus 8 k~vlVTGas~g---IG~~ia~~l~~-~G~~V~~~~r~~ 41 (249)
T 2ew8_A 8 KLAVITGGANG---IGRAIAERFAV-EGADIAIADLVP 41 (249)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHH-TTCEEEEEESSC
T ss_pred CEEEEeCCCcH---HHHHHHHHHHH-CCCEEEEEcCCc
Confidence 56677765543 34678999999 999999886443
No 348
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=21.13 E-value=39 Score=32.73 Aligned_cols=34 Identities=24% Similarity=0.174 Sum_probs=27.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
.|||+++..|-.| ..||+.|.+ .||+|+++=...
T Consensus 3 ~M~iiI~G~G~vG-----~~la~~L~~-~~~~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVG-----GTLAENLVG-ENNDITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHH-----HHHHHHTCS-TTEEEEEEESCH
T ss_pred cCEEEEECCCHHH-----HHHHHHHHH-CCCCEEEEECCH
Confidence 5789988887655 468999999 999999995443
No 349
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=21.03 E-value=53 Score=29.88 Aligned_cols=33 Identities=15% Similarity=0.103 Sum_probs=27.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCC-cEEEEEcCC
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLEKTNK-YTITFVNTP 43 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~~~rG-h~Vt~~~~~ 43 (473)
+++|.|+-.|..| ..+|..|.+ .| |+|++....
T Consensus 24 ~m~IgvIG~G~mG-----~~lA~~L~~-~G~~~V~~~dr~ 57 (317)
T 4ezb_A 24 MTTIAFIGFGEAA-----QSIAGGLGG-RNAARLAAYDLR 57 (317)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHT-TTCSEEEEECGG
T ss_pred CCeEEEECccHHH-----HHHHHHHHH-cCCCeEEEEeCC
Confidence 4689999887666 678999999 99 999988644
No 350
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=20.99 E-value=1.7e+02 Score=27.13 Aligned_cols=39 Identities=18% Similarity=0.196 Sum_probs=33.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcch
Q 047833 7 TIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNL 46 (473)
Q Consensus 7 ~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~ 46 (473)
-++++.-++.|-..-.+.++..+.. .|..|.|++.+...
T Consensus 76 li~I~G~pGsGKTtlal~la~~~~~-~g~~vlyi~~E~s~ 114 (366)
T 1xp8_A 76 ITEIYGPESGGKTTLALAIVAQAQK-AGGTCAFIDAEHAL 114 (366)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHH-TTCCEEEEESSCCC
T ss_pred EEEEEcCCCCChHHHHHHHHHHHHH-CCCeEEEEECCCCh
Confidence 4567777899999999999999999 99999999987643
No 351
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=20.95 E-value=92 Score=23.01 Aligned_cols=35 Identities=9% Similarity=-0.025 Sum_probs=25.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEE
Q 047833 4 RKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITF 39 (473)
Q Consensus 4 ~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~ 39 (473)
+.+||+++|..+.|+-.-.-.|-+.+.+ +|.++.+
T Consensus 3 ~~mkIlvvC~~G~~TSll~~kl~~~~~~-~gi~~~i 37 (109)
T 2l2q_A 3 GSMNILLVCGAGMSTSMLVQRIEKYAKS-KNINATI 37 (109)
T ss_dssp CCEEEEEESSSSCSSCHHHHHHHHHHHH-HTCSEEE
T ss_pred CceEEEEECCChHhHHHHHHHHHHHHHH-CCCCeEE
Confidence 3467999999888887555567777777 8876544
No 352
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=20.94 E-value=96 Score=27.27 Aligned_cols=35 Identities=17% Similarity=0.196 Sum_probs=25.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTP 43 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~ 43 (473)
+.|+++++.++.| =-.++|+.|.+ +|++|+++.-.
T Consensus 27 ~~k~~lVTGas~G---IG~aia~~la~-~G~~V~~~~r~ 61 (272)
T 4dyv_A 27 GKKIAIVTGAGSG---VGRAVAVALAG-AGYGVALAGRR 61 (272)
T ss_dssp -CCEEEETTTTSH---HHHHHHHHHHH-TTCEEEEEESC
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHH-CCCEEEEEECC
Confidence 3467888876643 24688999999 99999988644
No 353
>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A*
Probab=20.89 E-value=2.5e+02 Score=30.43 Aligned_cols=40 Identities=20% Similarity=0.235 Sum_probs=29.4
Q ss_pred CCcEEEEEcCCCc--cC----HHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 4 RKETIVLFPFMAQ--GH----IIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 4 ~~~~il~~~~~~~--GH----~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
++++|+++..|.. |. =....+++++|++ .||+|.++...+
T Consensus 558 ~~~kVlVlG~G~~riG~~~Efd~~~~~~~~al~~-~G~~vi~v~~np 603 (1073)
T 1a9x_A 558 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALRE-DGYETIMVNCNP 603 (1073)
T ss_dssp SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHH-TTCEEEEECCCT
T ss_pred cCcEEEEecCCccccccccccchhHHHHHHHHHh-cCCEEEEEecCC
Confidence 4568988887653 32 2456778999999 999999986443
No 354
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=20.77 E-value=1.1e+02 Score=27.16 Aligned_cols=39 Identities=21% Similarity=0.336 Sum_probs=29.5
Q ss_pred CCCcEEEEEcCCCccCHHHH--HHHHHHHHhCCC-cEEEEEcCC
Q 047833 3 QRKETIVLFPFMAQGHIIPF--LALALHLEKTNK-YTITFVNTP 43 (473)
Q Consensus 3 ~~~~~il~~~~~~~GH~~p~--l~La~~L~~~rG-h~Vt~~~~~ 43 (473)
.++.|||+++. ..+|-.+. -.|++.|.+ .| ++|++...+
T Consensus 2 ~~~~kvLiv~G-~~~H~~~~~~~~l~~~l~~-~g~f~V~~~~d~ 43 (281)
T 4e5v_A 2 RKPIKTLLITG-QNNHNWQVSHVVLKQILEN-SGRFDVDFVISP 43 (281)
T ss_dssp CCCEEEEEEES-CCSSCHHHHHHHHHHHHHH-TTSEEEEEEECC
T ss_pred CCceEEEEEcC-CCCCChHHHHHHHHHHHHh-cCCEEEEEEeCC
Confidence 35789999954 44886553 577888888 88 999999754
No 355
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=20.76 E-value=1.6e+02 Score=25.40 Aligned_cols=38 Identities=8% Similarity=0.030 Sum_probs=26.7
Q ss_pred cEEEEEcCC----CccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 6 ETIVLFPFM----AQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 6 ~~il~~~~~----~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
.||+|+..+ ..-...=+......|++ .|++|+++++..
T Consensus 24 kkV~ill~~~~~~dG~e~~E~~~p~~vL~~-aG~~V~~~S~~~ 65 (242)
T 3l3b_A 24 LNSAVILAGCGHMDGSEIREAVLVMLELDR-HNVNFKCFAPNK 65 (242)
T ss_dssp CEEEEECCCSSTTTSCCHHHHHHHHHHHHH-TTCEEEEEECSS
T ss_pred CEEEEEEecCCCCCCeeHHHHHHHHHHHHH-CCCEEEEEecCC
Confidence 588877651 12234446666789999 999999998754
No 356
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=20.68 E-value=73 Score=28.29 Aligned_cols=34 Identities=18% Similarity=0.186 Sum_probs=26.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
|+||.|+-.|..|. .+|+.|.+ .||+|+++....
T Consensus 1 M~~I~iiG~G~mG~-----~~a~~l~~-~G~~V~~~dr~~ 34 (287)
T 3pdu_A 1 MTTYGFLGLGIMGG-----PMAANLVR-AGFDVTVWNRNP 34 (287)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHHH-HTCCEEEECSSG
T ss_pred CCeEEEEccCHHHH-----HHHHHHHH-CCCeEEEEcCCH
Confidence 34799998877774 57899999 999999986443
No 357
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=20.64 E-value=2.8e+02 Score=22.57 Aligned_cols=113 Identities=17% Similarity=0.158 Sum_probs=61.3
Q ss_pred CeEEEEeeCCcccCCHHHHHHHHHHHHhCCCceEEEECCCC-CC-CccccccccCCcEEE---ecccChHHhhccCCcce
Q 047833 279 TSVLYVSFGSQNTIATSQMMQLAMALEASGKNFIWVVRPPI-GF-DINSEIKCSGQGLVV---HKWAPQVEILSHRSVSV 353 (473)
Q Consensus 279 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~-~~-~~~~~~~~~~~nv~~---~~~vp~~~ll~~~~v~~ 353 (473)
+.+++.-.||+.... ...+++.|.+.++++-++....- .+ .++. .....+.+.. ..|+++..+-..++. .
T Consensus 6 k~IllgvTGs~aa~k---~~~ll~~L~~~g~~V~vv~T~~A~~fi~~~~-l~~l~~~v~~~~~~~~~~hi~l~~~aD~-~ 80 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN---ISHYIIELKSKFDEVNVIASTNGRKFINGEI-LKQFCDNYYDEFEDPFLNHVDIANKHDK-I 80 (175)
T ss_dssp CEEEEEECSSGGGGG---HHHHHHHHTTTCSEEEEEECTGGGGGSCHHH-HHHHCSCEECTTTCTTCCHHHHHHTCSE-E
T ss_pred CEEEEEEeCHHHHHH---HHHHHHHHHHCCCEEEEEECcCHHHHhhHHH-HHHhcCCEEecCCCCccccccccchhCE-E
Confidence 346666666665532 34456667777777766664331 11 1111 1111112221 135667776666665 5
Q ss_pred eEeccCcchHH-------------HHHhhCCcEEecccc----ccc---hhhHHHHHHhhcceE
Q 047833 354 FLSHCGWNSVL-------------EALSHGVPIIGWPLA----AEQ---FYNSKLLEEEIGVCV 397 (473)
Q Consensus 354 ~I~HGG~gt~~-------------eal~~GvP~l~~P~~----~DQ---~~nA~~v~~~lG~g~ 397 (473)
+|.=+-.||+. -++..++|++++|-. +.. ..|-.++.+. |+=+
T Consensus 81 vVaPaTanTlakiA~GiaDnLlt~~~la~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~~-G~~i 143 (175)
T 3qjg_A 81 IILPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLLKDY-GVSI 143 (175)
T ss_dssp EEEEECHHHHHHHHTTCCCSHHHHHHHTCGGGEEEEECEEHHHHTCHHHHHHHHHHHHT-TCEE
T ss_pred EEeeCCHHHHHHHHccccCCHHHHHHHHcCCCEEEEecCChhhhcCHHHHHHHHHHHHC-CCEE
Confidence 66666666543 346779999999931 222 4566677755 7644
No 358
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=20.59 E-value=1.2e+02 Score=26.43 Aligned_cols=35 Identities=14% Similarity=-0.045 Sum_probs=26.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 6 ETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 6 ~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
-|.++++.++.| =-.++|+.|.+ +|++|++.....
T Consensus 27 gk~vlVTGas~g---IG~aia~~la~-~G~~V~~~~r~~ 61 (266)
T 3grp_A 27 GRKALVTGATGG---IGEAIARCFHA-QGAIVGLHGTRE 61 (266)
T ss_dssp TCEEEESSTTSH---HHHHHHHHHHH-TTCEEEEEESCH
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHH-CCCEEEEEeCCH
Confidence 367788877654 34678999999 999999886443
No 359
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=20.57 E-value=91 Score=30.81 Aligned_cols=35 Identities=17% Similarity=0.258 Sum_probs=28.7
Q ss_pred HHHHHHHHhHhhhcCCCCccEEEECCCcchHHHHHHHhCCceEEE
Q 047833 100 PHFKKLVNDLIDEQNGYKPLCIITDMFFGWCKEIAQEYGIFHAIF 144 (473)
Q Consensus 100 ~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~~~~~~A~~~giP~v~~ 144 (473)
..+.+++++. +||+++.... ...+|+++|||++.+
T Consensus 446 ~el~~~i~~~-------~pDl~ig~~~---~~~~a~k~gIP~~~~ 480 (533)
T 1mio_A 446 HDMEVVLEKL-------KPDMFFAGIK---EKFVIQKGGVLSKQL 480 (533)
T ss_dssp HHHHHHHHHH-------CCSEEEECHH---HHHHHHHTTCEEEET
T ss_pred HHHHHHHHhc-------CCCEEEcccc---hhHHHHhcCCCEEEe
Confidence 4567888888 9999998843 578899999999975
No 360
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=20.33 E-value=1.6e+02 Score=24.02 Aligned_cols=38 Identities=11% Similarity=0.031 Sum_probs=27.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCC--cEEEEEcCCc
Q 047833 5 KETIVLFPFMAQGHIIPFLALALHLEKTNK--YTITFVNTPL 44 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p~l~La~~L~~~rG--h~Vt~~~~~~ 44 (473)
+++|.++. ++.+|+.-+-..+..|.+ -| |+|.+++...
T Consensus 12 ~~~V~Iim-GS~SD~~v~~~a~~~L~~-~Gi~~ev~V~SaHR 51 (174)
T 3kuu_A 12 GVKIAIVM-GSKSDWATMQFAADVLTT-LNVPFHVEVVSAHR 51 (174)
T ss_dssp CCCEEEEE-SSGGGHHHHHHHHHHHHH-TTCCEEEEECCTTT
T ss_pred CCcEEEEE-CcHHHHHHHHHHHHHHHH-cCCCEEEEEEcccC
Confidence 44666665 689999999999999998 66 5555555433
No 361
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=20.32 E-value=90 Score=26.58 Aligned_cols=37 Identities=14% Similarity=0.104 Sum_probs=29.7
Q ss_pred EEEEEc-CCCccCHHHHHHHHHHHHhCC-CcEEEEEcCCc
Q 047833 7 TIVLFP-FMAQGHIIPFLALALHLEKTN-KYTITFVNTPL 44 (473)
Q Consensus 7 ~il~~~-~~~~GH~~p~l~La~~L~~~r-Gh~Vt~~~~~~ 44 (473)
.|.|++ -|+-|--.-...||..|.+ + |++|.++=...
T Consensus 6 vI~v~s~kGGvGKTt~a~~LA~~la~-~~g~~VlliD~D~ 44 (245)
T 3ea0_A 6 VFGFVSAKGGDGGSCIAANFAFALSQ-EPDIHVLAVDISL 44 (245)
T ss_dssp EEEEEESSTTSSHHHHHHHHHHHHTT-STTCCEEEEECCT
T ss_pred EEEEECCCCCcchHHHHHHHHHHHHh-CcCCCEEEEECCC
Confidence 344443 3788999999999999999 9 99999996554
No 362
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=20.31 E-value=36 Score=28.82 Aligned_cols=33 Identities=15% Similarity=0.209 Sum_probs=24.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcc
Q 047833 7 TIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLN 45 (473)
Q Consensus 7 ~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~ 45 (473)
||+++.. |.+ -..+|+.|.+ +||+|+++.....
T Consensus 2 ~iiIiG~---G~~--G~~la~~L~~-~g~~v~vid~~~~ 34 (218)
T 3l4b_C 2 KVIIIGG---ETT--AYYLARSMLS-RKYGVVIINKDRE 34 (218)
T ss_dssp CEEEECC---HHH--HHHHHHHHHH-TTCCEEEEESCHH
T ss_pred EEEEECC---CHH--HHHHHHHHHh-CCCeEEEEECCHH
Confidence 5777654 333 3578999999 9999999975543
No 363
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=20.26 E-value=2e+02 Score=20.42 Aligned_cols=31 Identities=23% Similarity=0.085 Sum_probs=23.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEc
Q 047833 6 ETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVN 41 (473)
Q Consensus 6 ~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~ 41 (473)
.+|+++|.. | ......+..|++ .||+|..+.
T Consensus 57 ~~ivvyC~~--g--~rs~~a~~~L~~-~G~~v~~l~ 87 (100)
T 3foj_A 57 ETYYIICKA--G--GRSAQVVQYLEQ-NGVNAVNVE 87 (100)
T ss_dssp SEEEEECSS--S--HHHHHHHHHHHT-TTCEEEEET
T ss_pred CcEEEEcCC--C--chHHHHHHHHHH-CCCCEEEec
Confidence 478888854 3 456788999999 999887764
No 364
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=20.26 E-value=90 Score=27.64 Aligned_cols=37 Identities=11% Similarity=0.060 Sum_probs=30.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 047833 6 ETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTP 43 (473)
Q Consensus 6 ~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~ 43 (473)
..|+|..-|+-|--.-...||..|++ +|++|.++=..
T Consensus 3 kvIavs~KGGvGKTT~a~nLA~~La~-~G~rVlliD~D 39 (289)
T 2afh_E 3 RQCAIYGKGGIGKSTTTQNLVAALAE-MGKKVMIVGCD 39 (289)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHH-TTCCEEEEEEC
T ss_pred eEEEEeCCCcCcHHHHHHHHHHHHHH-CCCeEEEEecC
Confidence 35666666788999999999999999 99999987533
No 365
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=20.26 E-value=98 Score=26.62 Aligned_cols=34 Identities=12% Similarity=0.061 Sum_probs=25.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 7 TIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 7 ~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
|.++++.++.| =-.++|+.|.+ +|++|+++.-..
T Consensus 3 k~vlVTGas~g---IG~~ia~~l~~-~G~~V~~~~r~~ 36 (247)
T 3dii_A 3 RGVIVTGGGHG---IGKQICLDFLE-AGDKVCFIDIDE 36 (247)
T ss_dssp CEEEEESTTSH---HHHHHHHHHHH-TTCEEEEEESCH
T ss_pred CEEEEECCCCH---HHHHHHHHHHH-CCCEEEEEeCCH
Confidence 56677766553 34688999999 999999876443
No 366
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=20.26 E-value=97 Score=27.98 Aligned_cols=36 Identities=11% Similarity=0.170 Sum_probs=28.6
Q ss_pred CcEEEEEcCCCccCHHH-HHHHHHHHHhCCCcEEEEEc
Q 047833 5 KETIVLFPFMAQGHIIP-FLALALHLEKTNKYTITFVN 41 (473)
Q Consensus 5 ~~~il~~~~~~~GH~~p-~l~La~~L~~~rGh~Vt~~~ 41 (473)
|.||+++..+..++... ...+.+.|.+ +|++|.+..
T Consensus 4 m~ki~iI~n~~~~~~~~~~~~l~~~L~~-~g~~v~~~~ 40 (307)
T 1u0t_A 4 HRSVLLVVHTGRDEATETARRVEKVLGD-NKIALRVLS 40 (307)
T ss_dssp -CEEEEEESSSGGGGSHHHHHHHHHHHT-TTCEEEEEC
T ss_pred CCEEEEEEeCCCHHHHHHHHHHHHHHHH-CCCEEEEec
Confidence 56899999988877644 6678889999 999988764
No 367
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=20.21 E-value=1.2e+02 Score=29.09 Aligned_cols=41 Identities=15% Similarity=0.189 Sum_probs=34.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchh
Q 047833 6 ETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPLNLR 47 (473)
Q Consensus 6 ~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~~~~ 47 (473)
..|+++..++.|-.+-...||..|++ +|++|.++....+..
T Consensus 101 ~vIlivG~~G~GKTTt~~kLA~~l~~-~G~kVllv~~D~~R~ 141 (443)
T 3dm5_A 101 TILLMVGIQGSGKTTTVAKLARYFQK-RGYKVGVVCSDTWRP 141 (443)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHHT-TTCCEEEEECCCSST
T ss_pred eEEEEECcCCCCHHHHHHHHHHHHHH-CCCeEEEEeCCCcch
Confidence 35567777889999999999999999 999999999776643
No 368
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=20.20 E-value=86 Score=29.08 Aligned_cols=36 Identities=17% Similarity=0.093 Sum_probs=24.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 047833 3 QRKETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTP 43 (473)
Q Consensus 3 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~ 43 (473)
.+|++|+++. +.|-+ -..|++.|.+ +||+|+.+.-.
T Consensus 27 ~~~~~vlVtG--atG~i--G~~l~~~L~~-~g~~V~~~~r~ 62 (379)
T 2c5a_A 27 SENLKISITG--AGGFI--ASHIARRLKH-EGHYVIASDWK 62 (379)
T ss_dssp TSCCEEEEET--TTSHH--HHHHHHHHHH-TTCEEEEEESS
T ss_pred ccCCeEEEEC--CccHH--HHHHHHHHHH-CCCeEEEEECC
Confidence 3456776653 33433 3567899999 99999998743
No 369
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=20.18 E-value=2.2e+02 Score=25.23 Aligned_cols=40 Identities=13% Similarity=0.118 Sum_probs=29.4
Q ss_pred HHHHHHHHhHhhhcCCCCccEEEECCCcc--hHHHHHHHhCCceEEEec
Q 047833 100 PHFKKLVNDLIDEQNGYKPLCIITDMFFG--WCKEIAQEYGIFHAIFIG 146 (473)
Q Consensus 100 ~~~~~~l~~~~~~~~~~~pD~Vv~d~~~~--~~~~~A~~~giP~v~~~~ 146 (473)
..+.+.+++. +..+|+++..+. .+..+|+..|++.+.+.+
T Consensus 216 ~~l~~~ik~~-------~v~~if~e~~~~~~~~~~ia~~~g~~v~~l~~ 257 (284)
T 3cx3_A 216 TEIQEFVKTY-------KVKTIFTESNASSKVAETLVKSTGVGLKTLNP 257 (284)
T ss_dssp HHHHHHHHHT-------TCCCEEECSSSCCHHHHHHHSSSSCCEEECCC
T ss_pred HHHHHHHHHc-------CCCEEEEeCCCCcHHHHHHHHHcCCeEEEecC
Confidence 3445666666 889999997655 345789999999987643
No 370
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=20.16 E-value=1.3e+02 Score=24.98 Aligned_cols=36 Identities=17% Similarity=0.037 Sum_probs=29.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 047833 6 ETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNT 42 (473)
Q Consensus 6 ~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~ 42 (473)
..++++..|..|+-.-...+++.|.+ +|+.|..+-.
T Consensus 32 ~p~vv~~HG~~g~~~~~~~~~~~l~~-~G~~v~~~d~ 67 (241)
T 3f67_A 32 LPIVIVVQEIFGVHEHIRDLCRRLAQ-EGYLAIAPEL 67 (241)
T ss_dssp EEEEEEECCTTCSCHHHHHHHHHHHH-TTCEEEEECT
T ss_pred CCEEEEEcCcCccCHHHHHHHHHHHH-CCcEEEEecc
Confidence 34666677777888889999999999 9999988753
No 371
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=20.10 E-value=1e+02 Score=27.32 Aligned_cols=35 Identities=20% Similarity=0.120 Sum_probs=26.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 6 ETIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 6 ~~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
.|+++++.++.| =-.++|+.|.+ +|++|.++.-..
T Consensus 28 ~k~~lVTGas~G---IG~aia~~la~-~G~~V~~~~r~~ 62 (283)
T 3v8b_A 28 SPVALITGAGSG---IGRATALALAA-DGVTVGALGRTR 62 (283)
T ss_dssp CCEEEEESCSSH---HHHHHHHHHHH-TTCEEEEEESSH
T ss_pred CCEEEEECCCCH---HHHHHHHHHHH-CCCEEEEEeCCH
Confidence 367777776654 34688999999 999999886443
No 372
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=20.06 E-value=94 Score=25.77 Aligned_cols=37 Identities=14% Similarity=0.248 Sum_probs=27.4
Q ss_pred EEEEEcCCCc---cCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 7 TIVLFPFMAQ---GHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 7 ~il~~~~~~~---GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
+|+++|.-+. ---+++-.|++.|++ +|.+|.|..+|-
T Consensus 48 ~ViIVPGYGmAVAqAQ~~v~el~~~L~~-~G~~V~faIHPV 87 (203)
T 2fsv_C 48 KVIIVPGYGMAVAQAQHALREMADVLKK-EGVEVSYAIHPV 87 (203)
T ss_dssp EEEEEECHHHHHHTCHHHHHHHHHHHHH-TTCEEEEEECTT
T ss_pred cEEEEcCchHhHHHHHHHHHHHHHHHHH-cCCeEEEEeccc
Confidence 6777764211 124578899999999 999999998765
No 373
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=20.04 E-value=83 Score=28.19 Aligned_cols=33 Identities=18% Similarity=0.084 Sum_probs=23.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 047833 7 TIVLFPFMAQGHIIPFLALALHLEKTNKYTITFVNTPL 44 (473)
Q Consensus 7 ~il~~~~~~~GH~~p~l~La~~L~~~rGh~Vt~~~~~~ 44 (473)
+|+++. +.|.+ -..|+++|.+ +||+|+.++-..
T Consensus 13 ~ilVtG--atG~i--G~~l~~~L~~-~g~~V~~l~R~~ 45 (318)
T 2r6j_A 13 KILIFG--GTGYI--GNHMVKGSLK-LGHPTYVFTRPN 45 (318)
T ss_dssp CEEEET--TTSTT--HHHHHHHHHH-TTCCEEEEECTT
T ss_pred eEEEEC--CCchH--HHHHHHHHHH-CCCcEEEEECCC
Confidence 566553 34444 3578899999 999999987544
No 374
>1wrd_A TOM1, target of MYB protein 1; three-helix bundle, ubiquitin-binding protein, protein trans signaling protein complex; 1.75A {Homo sapiens} SCOP: a.7.8.1
Probab=20.00 E-value=1.4e+02 Score=21.90 Aligned_cols=39 Identities=5% Similarity=0.126 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHHhcccccccCC---cHHHHHHHHHHHHHhhhhh
Q 047833 428 ELRKNAYEVREIIKNAFKNEENFQG---SSVKAMNQFLNAASMVKET 471 (473)
Q Consensus 428 ~~~~~a~~l~~~~~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~ 471 (473)
..+.|++-|.+++... ..|+ +....+.+|....++++..
T Consensus 17 ~v~~n~~lL~EML~~~-----~p~~~~~~~~el~~eL~~~c~~~qp~ 58 (103)
T 1wrd_A 17 MVSGNVRVMSEMLTEL-----VPTQAEPADLELLQELNRTCRAMQQR 58 (103)
T ss_dssp HHHHHHHHHHHHHHHS-----CTTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc-----CCCCCCcccHHHHHHHHHHHHHHHHH
Confidence 5777777777777654 3332 2335566666666655543
Done!