BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>047835
MRKKILYRLDNMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGDIDEVALANMLR
RKIGYVETMKLDILDGRNQPAIEPEVPQQPFPAETPCCSIM

High Scoring Gene Products

Symbol, full name Information P value
AT3G07600 protein from Arabidopsis thaliana 4.7e-09
AT5G48290 protein from Arabidopsis thaliana 2.5e-08
AT5G52750 protein from Arabidopsis thaliana 3.4e-06
AT3G20180 protein from Arabidopsis thaliana 9.0e-06
AT1G01490 protein from Arabidopsis thaliana 2.3e-05
AT4G05030 protein from Arabidopsis thaliana 2.4e-05
AT5G52770 protein from Arabidopsis thaliana 8.1e-05

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  047835
        (101 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2091112 - symbol:AT3G07600 species:3702 "Arabi...   134  4.7e-09   1
TAIR|locus:2156253 - symbol:AT5G48290 species:3702 "Arabi...   108  2.5e-08   2
TAIR|locus:2149594 - symbol:AT5G52750 species:3702 "Arabi...   107  3.4e-06   1
TAIR|locus:2087580 - symbol:AT3G20180 "AT3G20180" species...   103  9.0e-06   1
TAIR|locus:2025421 - symbol:AT1G01490 species:3702 "Arabi...   100  2.3e-05   1
TAIR|locus:2138376 - symbol:AT4G05030 "AT4G05030" species...    99  2.4e-05   1
TAIR|locus:2149629 - symbol:AT5G52770 species:3702 "Arabi...    94  8.1e-05   1


>TAIR|locus:2091112 [details] [associations]
            symbol:AT3G07600 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0030001 "metal ion
            transport" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA;ISS] InterPro:IPR006121 Pfam:PF00403 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0030001 EMBL:AC009176
            ProtClustDB:CLSN2684848 IPI:IPI00519941 RefSeq:NP_187417.1
            UniGene:At.18333 UniGene:At.48632 ProteinModelPortal:Q9SSF0
            SMR:Q9SSF0 EnsemblPlants:AT3G07600.1 GeneID:819951
            KEGG:ath:AT3G07600 eggNOG:NOG286763 OMA:QDPNCRI
            Genevestigator:Q9SSF0 Uniprot:Q9SSF0
        Length = 157

 Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
 Identities = 39/110 (35%), Positives = 58/110 (52%)

Query:     1 MRKKILYRLDNMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIG-DIDEVALANML 59
             M++KIL R+  M     R KA K    F G+ +V +KGD    +EV G ++D +AL N L
Sbjct:     1 MKQKILIRIA-MTDDTTRAKAMKTAVQFKGVNAVEIKGDHRNQIEVTGVEVDMIALINTL 59

Query:    60 RRKIGYVETMKLDIL----DGRNQPAIE--PEV--PQQPFPAET---PCC 98
             R+K+ + E + +  +    DG  +P  E  PE   P++  P E    PCC
Sbjct:    60 RKKVAFAELVSVAKVEPPKDGDKKPEEEKKPEEKKPEEKKPEEKKPEPCC 109


>TAIR|locus:2156253 [details] [associations]
            symbol:AT5G48290 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0030001 "metal ion
            transport" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA;ISS] InterPro:IPR006121 Pfam:PF00403 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0030001
            HOGENOM:HOG000237719 EMBL:BT020300 EMBL:BT020469 IPI:IPI00541268
            RefSeq:NP_568695.1 UniGene:At.28683 ProteinModelPortal:Q5PNZ7
            SMR:Q5PNZ7 EnsemblPlants:AT5G48290.1 GeneID:834882
            KEGG:ath:AT5G48290 TAIR:At5g48290 eggNOG:NOG241974
            InParanoid:Q5PNZ7 OMA:NDIGEPV PhylomeDB:Q5PNZ7
            ProtClustDB:CLSN2684848 Genevestigator:Q5PNZ7 Uniprot:Q5PNZ7
        Length = 181

 Score = 108 (43.1 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
 Identities = 25/72 (34%), Positives = 41/72 (56%)

Query:     1 MRKKILYRLDNMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIG-DIDEVALANML 59
             M++KIL R+  M   K R KA      F G+ +V +KGD    +EV G ++D + L  +L
Sbjct:     1 MKQKILIRV-TMTDDKTRAKAMTKAVQFKGVSAVEIKGDHRNQIEVTGVEVDMIPLIQIL 59

Query:    60 RRKIGYVETMKL 71
             R+K+ + E + +
Sbjct:    60 RKKVAFAELVSV 71

 Score = 31 (16.0 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
 Identities = 5/14 (35%), Positives = 7/14 (50%)

Query:    84 PEVPQQPFPAETPC 97
             P+  + P P   PC
Sbjct:   106 PDDKEPPEPKPVPC 119


>TAIR|locus:2149594 [details] [associations]
            symbol:AT5G52750 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0030001 "metal ion
            transport" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA;ISS] [GO:0000165 "MAPK cascade" evidence=RCA]
            [GO:0009814 "defense response, incompatible interaction"
            evidence=RCA] InterPro:IPR006121 Pfam:PF00403 EMBL:CP002688
            GO:GO:0046872 GO:GO:0030001 EMBL:AB025606 HOGENOM:HOG000237719
            ProtClustDB:CLSN2686120 EMBL:AF083736 EMBL:BT003668 EMBL:BT025501
            EMBL:AK117134 IPI:IPI00525890 RefSeq:NP_200087.1 UniGene:At.43541
            ProteinModelPortal:Q9LTE2 SMR:Q9LTE2 IntAct:Q9LTE2 STRING:Q9LTE2
            EnsemblPlants:AT5G52750.1 GeneID:835352 KEGG:ath:AT5G52750
            TAIR:At5g52750 OMA:DESNCVI PhylomeDB:Q9LTE2 Genevestigator:Q9LTE2
            Uniprot:Q9LTE2
        Length = 139

 Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
 Identities = 27/86 (31%), Positives = 45/86 (52%)

Query:    11 NMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGDIDEVALANMLRRKIGYVETMK 70
             ++H  + R KAF  ++  PG+ S+ M  D    M V+G++D V +  M  RK+   E + 
Sbjct:    11 SIHEERIRKKAFVTVSRCPGVTSITMD-DKTGKMTVVGEVD-VPVIVMKLRKLCNTELVS 68

Query:    71 LDILDGRNQPAIEPEVPQQPFPAETP 96
             ++++    +   EPE P  P PA  P
Sbjct:    69 VEVVKPPEKKP-EPEKPAPPKPAPAP 93


>TAIR|locus:2087580 [details] [associations]
            symbol:AT3G20180 "AT3G20180" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND]
            EMBL:CP002686 IPI:IPI00542114 RefSeq:NP_188653.1 UniGene:At.63564
            ProteinModelPortal:F4JDJ0 DNASU:821562 EnsemblPlants:AT3G20180.1
            GeneID:821562 KEGG:ath:AT3G20180 OMA:GEFQDEL PhylomeDB:F4JDJ0
            Uniprot:F4JDJ0
        Length = 118

 Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
 Identities = 25/74 (33%), Positives = 43/74 (58%)

Query:    11 NMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGD-IDEVALANMLRRKIGYVETM 69
             +++S KCR KA ++     G+ SVAM+G+    + V+GD +D  +L   LR+K  +V   
Sbjct:     6 SVNSEKCRKKAMQVAVAADGVTSVAMEGEFQDELVVVGDGVDSASLIMALRKKACHVT-- 63

Query:    70 KLDILDGRNQPAIE 83
              L+ L+   +P +E
Sbjct:    64 -LETLEEVKKPQVE 76


>TAIR|locus:2025421 [details] [associations]
            symbol:AT1G01490 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0030001 "metal ion
            transport" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA;ISS] InterPro:IPR006121 Pfam:PF00403 EMBL:CP002684
            GO:GO:0046872 GO:GO:0030001 EMBL:AY063805 EMBL:AY091276 EMBL:Y10084
            IPI:IPI00534476 RefSeq:NP_001030928.1 RefSeq:NP_171656.1
            UniGene:At.27454 ProteinModelPortal:O03982 PaxDb:O03982
            PRIDE:O03982 EnsemblPlants:AT1G01490.1 EnsemblPlants:AT1G01490.2
            GeneID:839440 KEGG:ath:AT1G01490 TAIR:At1g01490 eggNOG:NOG282717
            InParanoid:O03982 OMA:TYYYAQS PhylomeDB:O03982
            ProtClustDB:CLSN2912783 ArrayExpress:O03982 Genevestigator:O03982
            Uniprot:O03982
        Length = 177

 Score = 100 (40.3 bits), Expect = 2.3e-05, P = 2.3e-05
 Identities = 30/90 (33%), Positives = 50/90 (55%)

Query:     3 KKILYRLDNMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGDIDEVALANMLRRK 62
             KKI+ +LD +H  + + KA K ++  PG+ S+AM   + + + VIG +D V + + LR+ 
Sbjct:     2 KKIVLKLD-LHDDRAKQKALKTVSTLPGIDSIAMDMKE-KKLTVIGTVDPVNVVSKLRK- 58

Query:    63 IGYVETMKLDILDGRNQPAIEPEVPQQPFP 92
               Y     + +L G   PA EPE  ++  P
Sbjct:    59 --YWPMTDI-VLVG---PAKEPEKEKKEEP 82


>TAIR|locus:2138376 [details] [associations]
            symbol:AT4G05030 "AT4G05030" species:3702 "Arabidopsis
            thaliana" [GO:0046872 "metal ion binding" evidence=ISS]
            EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161502 EMBL:AF162444
            IPI:IPI00529329 PIR:C85063 RefSeq:NP_567284.1 UniGene:At.54153
            ProteinModelPortal:Q9S9T4 SMR:Q9S9T4 EnsemblPlants:AT4G05030.1
            GeneID:825845 KEGG:ath:AT4G05030 TAIR:At4g05030 eggNOG:NOG284398
            InParanoid:Q9S9T4 OMA:YYGYYCH PhylomeDB:Q9S9T4
            ProtClustDB:CLSN2917512 ArrayExpress:Q9S9T4 Genevestigator:Q9S9T4
            Uniprot:Q9S9T4
        Length = 110

 Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
 Identities = 24/73 (32%), Positives = 43/73 (58%)

Query:     4 KILYRLDNMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGD-IDEVALANMLRRK 62
             KIL  + +M   KCR++A KI A   G+  V ++G++   + VIG+ +D   L   LR+K
Sbjct:    37 KILMSV-SMRCDKCRSEALKIGAKTTGVTFVGIEGEEKDKVVVIGEGVDAACLVVRLRKK 95

Query:    63 IGYVETMKLDILD 75
             +G+ + + +  +D
Sbjct:    96 VGFADIISVTDVD 108


>TAIR|locus:2149629 [details] [associations]
            symbol:AT5G52770 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0030001 "metal ion
            transport" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] InterPro:IPR006121 Pfam:PF00403 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0030001 EMBL:AB025606
            EMBL:DQ056717 IPI:IPI00517038 RefSeq:NP_200089.1 UniGene:At.55514
            ProteinModelPortal:Q9LTE0 EnsemblPlants:AT5G52770.1 GeneID:835354
            KEGG:ath:AT5G52770 TAIR:At5g52770 eggNOG:KOG1603 PhylomeDB:Q9LTE0
            Genevestigator:Q9LTE0 Uniprot:Q9LTE0
        Length = 111

 Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
 Identities = 26/78 (33%), Positives = 42/78 (53%)

Query:    18 RTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGDIDEVALANMLRRKIGYVETMKLD-ILDG 76
             + ++F  +AGF G+ S+ +  D    + V+GDID V +  M  RK+   E + +D +   
Sbjct:    16 QNESFVTVAGFTGVTSITID-DKTGKLTVVGDID-VPIIVMKLRKLCKTEIISVDAVKPP 73

Query:    77 RNQPAIEPEVPQQPFPAE 94
               +P  EPE P  P P+E
Sbjct:    74 EKKP--EPEKPAPPKPSE 89


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.141   0.422    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      101       101   0.00091  102 3  11 22  0.37    30
                                                     29  0.47    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  514 (55 KB)
  Total size of DFA:  104 KB (2073 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.86u 0.16s 11.02t   Elapsed:  00:00:00
  Total cpu time:  10.86u 0.16s 11.02t   Elapsed:  00:00:00
  Start:  Thu May  9 20:17:40 2013   End:  Thu May  9 20:17:40 2013

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