Query 047835
Match_columns 101
No_of_seqs 105 out of 669
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 05:39:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047835.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047835hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwl_A Copper transport protei 99.4 1.3E-12 4.6E-17 78.7 8.1 66 3-71 2-67 (68)
2 1cc8_A Protein (metallochapero 99.4 2.9E-12 1E-16 77.5 9.6 68 1-70 3-71 (73)
3 2crl_A Copper chaperone for su 99.2 2.5E-10 8.7E-15 74.1 10.0 71 2-74 18-88 (98)
4 4a4j_A Pacszia, cation-transpo 99.1 5.1E-10 1.8E-14 66.3 8.2 65 2-68 1-68 (69)
5 3dxs_X Copper-transporting ATP 99.0 2.1E-09 7.2E-14 64.6 8.8 67 2-70 1-71 (74)
6 2xmw_A PACS-N, cation-transpor 99.0 6.5E-09 2.2E-13 60.3 9.3 65 1-67 1-68 (71)
7 3fry_A Probable copper-exporti 99.0 1.9E-09 6.5E-14 65.4 7.1 66 1-70 3-69 (73)
8 2roe_A Heavy metal binding pro 98.8 8.1E-09 2.8E-13 60.2 6.0 60 6-67 3-63 (66)
9 2xmm_A SSR2857 protein, ATX1; 98.7 1.4E-08 4.8E-13 57.8 4.9 56 5-62 3-59 (64)
10 1qup_A Superoxide dismutase 1 98.7 5.1E-08 1.8E-12 72.5 8.7 70 3-74 6-75 (222)
11 2aj0_A Probable cadmium-transp 98.7 7.8E-08 2.7E-12 56.7 7.3 51 1-53 1-52 (71)
12 2l3m_A Copper-ION-binding prot 98.7 2.9E-07 1E-11 53.4 8.9 59 2-62 4-66 (71)
13 1aw0_A Menkes copper-transport 98.6 1.4E-07 4.9E-12 54.8 7.2 63 2-66 2-68 (72)
14 1fvq_A Copper-transporting ATP 98.6 2.9E-07 9.9E-12 53.4 8.4 65 4-70 3-70 (72)
15 1osd_A MERP, hypothetical prot 98.6 2.1E-07 7.2E-12 54.0 7.7 63 3-67 3-69 (72)
16 3cjk_B Copper-transporting ATP 98.6 6.4E-07 2.2E-11 52.7 9.5 66 3-70 2-71 (75)
17 1jk9_B CCS, copper chaperone f 98.6 1.6E-07 5.6E-12 71.0 8.6 70 3-74 7-76 (249)
18 1yjr_A Copper-transporting ATP 98.6 4.6E-07 1.6E-11 52.9 8.0 65 2-68 3-71 (75)
19 2qif_A Copper chaperone COPZ; 98.6 7.5E-07 2.6E-11 50.3 8.7 57 4-62 3-63 (69)
20 2k2p_A Uncharacterized protein 98.5 9.6E-08 3.3E-12 60.2 4.5 58 3-62 22-80 (85)
21 1yg0_A COP associated protein; 98.5 5.7E-07 2E-11 51.2 6.5 56 5-62 3-61 (66)
22 1mwy_A ZNTA; open-faced beta-s 98.5 1.7E-06 5.9E-11 50.9 8.6 58 3-62 3-62 (73)
23 1cpz_A Protein (COPZ); copper 98.4 9.4E-07 3.2E-11 50.5 6.9 61 6-68 3-67 (68)
24 1kvi_A Copper-transporting ATP 98.4 5.8E-07 2E-11 53.6 6.2 65 3-69 8-76 (79)
25 1y3j_A Copper-transporting ATP 98.4 7.1E-07 2.4E-11 53.1 6.4 66 2-69 2-71 (77)
26 2g9o_A Copper-transporting ATP 98.4 1.3E-06 4.3E-11 54.8 7.8 57 4-62 4-64 (90)
27 1q8l_A Copper-transporting ATP 98.4 9E-07 3.1E-11 54.1 6.9 64 3-68 9-76 (84)
28 1opz_A Potential copper-transp 98.4 1E-06 3.4E-11 51.3 6.2 59 3-63 6-68 (76)
29 2kyz_A Heavy metal binding pro 98.4 3.9E-07 1.3E-11 53.2 4.0 55 5-63 3-58 (67)
30 2ldi_A Zinc-transporting ATPas 98.3 2.7E-06 9.3E-11 48.5 7.1 58 3-62 3-64 (71)
31 1jww_A Potential copper-transp 98.3 4.3E-06 1.5E-10 49.4 8.1 64 3-68 3-70 (80)
32 1p6t_A Potential copper-transp 98.3 1.6E-06 5.3E-11 57.7 6.4 66 3-70 74-143 (151)
33 2kt2_A Mercuric reductase; nme 98.3 1.9E-06 6.5E-11 49.8 6.0 59 6-66 3-64 (69)
34 2ew9_A Copper-transporting ATP 98.3 2.2E-06 7.7E-11 56.5 6.5 63 3-67 80-146 (149)
35 2ofg_X Zinc-transporting ATPas 98.3 4.5E-06 1.5E-10 54.4 7.9 59 3-63 8-70 (111)
36 2kkh_A Putative heavy metal tr 98.2 1.1E-05 3.9E-10 50.3 8.3 66 3-70 16-85 (95)
37 2ew9_A Copper-transporting ATP 98.2 5.9E-06 2E-10 54.4 7.1 66 1-68 2-71 (149)
38 2rop_A Copper-transporting ATP 98.1 1.5E-05 5.2E-10 56.2 8.2 66 3-70 122-191 (202)
39 2rop_A Copper-transporting ATP 97.8 5.1E-05 1.8E-09 53.4 6.7 58 3-62 20-81 (202)
40 1p6t_A Potential copper-transp 97.6 0.00034 1.2E-08 46.1 7.6 59 2-62 5-67 (151)
41 3j09_A COPA, copper-exporting 97.2 0.0011 3.9E-08 55.8 8.1 58 4-63 3-64 (723)
42 3bpd_A Uncharacterized protein 83.4 1.8 6.3E-05 28.7 4.5 48 17-64 20-74 (100)
43 2raq_A Conserved protein MTH88 80.8 1.8 6E-05 28.7 3.6 60 4-64 8-74 (97)
44 2x3d_A SSO6206; unknown functi 78.6 2.7 9.3E-05 27.7 4.0 47 18-64 20-73 (96)
45 2jsx_A Protein NAPD; TAT, proo 74.0 7.1 0.00024 25.0 5.0 17 16-32 17-33 (95)
46 2jsx_A Protein NAPD; TAT, proo 71.3 17 0.00059 23.2 6.6 27 22-49 20-49 (95)
47 3cq1_A Putative uncharacterize 70.9 4.9 0.00017 25.5 3.7 34 4-38 42-81 (103)
48 2cpq_A FragIle X mental retard 69.3 11 0.00036 24.3 5.0 35 19-55 34-68 (91)
49 1uwd_A Hypothetical protein TM 65.7 7.1 0.00024 24.7 3.6 34 4-38 43-82 (103)
50 1dtj_A RNA-binding neurooncolo 52.9 25 0.00087 20.5 4.4 52 1-54 1-63 (76)
51 3lno_A Putative uncharacterize 52.0 11 0.00036 24.2 2.7 34 4-38 45-85 (108)
52 1vbk_A Hypothetical protein PH 48.3 39 0.0013 25.3 5.7 46 17-67 26-73 (307)
53 2ko1_A CTR148A, GTP pyrophosph 47.0 40 0.0014 19.4 5.1 31 5-36 47-77 (88)
54 3ami_A Zinc peptidase; alpha/b 43.5 15 0.0005 27.6 2.6 23 42-64 190-212 (445)
55 2k1h_A Uncharacterized protein 41.8 55 0.0019 20.9 4.9 38 21-61 41-80 (94)
56 2yy3_A Elongation factor 1-bet 40.0 33 0.0011 21.9 3.6 35 4-38 52-87 (91)
57 3go9_A Insulinase family prote 38.6 31 0.0011 26.8 3.9 23 42-64 212-234 (492)
58 2kgs_A Uncharacterized protein 38.3 50 0.0017 21.8 4.4 32 19-54 67-98 (132)
59 2g2k_A EIF-5, eukaryotic trans 36.5 32 0.0011 24.5 3.4 28 35-63 66-93 (170)
60 3amj_B Zinc peptidase inactive 34.0 28 0.00096 25.6 2.8 24 42-65 190-213 (424)
61 2qip_A Protein of unknown func 33.7 26 0.0009 23.6 2.5 31 42-72 111-142 (165)
62 3eoq_A Putative zinc protease; 33.7 22 0.00076 26.2 2.3 23 42-64 183-205 (406)
63 3g74_A Protein of unknown func 33.2 39 0.0013 21.7 3.1 26 50-75 60-85 (100)
64 2e9h_A EIF-5, eukaryotic trans 32.9 37 0.0013 23.8 3.2 28 35-63 73-100 (157)
65 1hr6_B Beta-MPP, mitochondrial 31.4 25 0.00087 26.0 2.3 23 42-64 189-211 (443)
66 1gh8_A Translation elongation 31.4 58 0.002 20.6 3.7 34 5-38 51-84 (89)
67 2h1z_A Hybrid atracotoxin; bet 30.5 20 0.00069 19.8 1.1 12 88-99 8-19 (39)
68 2ctf_A Vigilin; K homology typ 30.2 90 0.0031 19.7 4.5 38 20-59 48-86 (102)
69 1b64_A Elongation factor 1-bet 28.9 1E+02 0.0035 19.5 4.6 35 6-40 54-89 (91)
70 1pp9_A Ubiquinol-cytochrome C 28.6 30 0.001 25.8 2.3 23 42-64 195-217 (446)
71 1n0u_A EF-2, elongation factor 28.5 88 0.003 26.7 5.3 61 6-67 728-793 (842)
72 4dok_A Similarity to chalcone- 27.8 42 0.0015 24.2 2.9 33 30-64 28-61 (208)
73 3d3y_A Uncharacterized protein 25.7 45 0.0016 24.2 2.7 22 42-64 201-222 (425)
74 3hrg_A Uncharacterized protein 25.7 80 0.0027 23.1 4.1 35 35-70 208-243 (257)
75 3q9p_A Heat shock protein beta 24.4 49 0.0017 19.9 2.3 24 27-51 14-39 (85)
76 2z30_B TK-subtilisin; thermoco 24.2 89 0.0031 17.9 3.4 17 22-38 44-60 (65)
77 1f60_B Elongation factor EEF1B 23.8 1E+02 0.0035 19.7 3.8 32 7-38 58-90 (94)
78 1ec6_A RNA-binding protein NOV 22.7 79 0.0027 18.9 3.0 51 1-53 1-62 (87)
79 3pro_C Alpha-lytic protease; P 22.2 35 0.0012 24.0 1.4 22 27-49 112-133 (166)
80 1q2l_A Protease III; hydrolase 22.0 52 0.0018 27.3 2.6 23 42-64 208-230 (939)
81 3cx5_A Cytochrome B-C1 complex 21.8 52 0.0018 24.0 2.4 22 42-63 180-201 (431)
82 1pqx_A Conserved hypothetical 21.3 53 0.0018 20.9 2.0 37 21-60 41-79 (91)
83 2d74_B Translation initiation 21.3 46 0.0016 23.1 1.9 22 42-63 80-101 (148)
84 4fn5_A EF-G 1, elongation fact 21.1 1.3E+02 0.0044 25.0 4.9 60 6-68 622-686 (709)
85 4evu_A Putative periplasmic pr 20.9 62 0.0021 19.9 2.2 22 42-63 21-43 (72)
86 2cuy_A Malonyl COA-[acyl carri 20.5 2.6E+02 0.0088 20.5 6.7 51 18-70 137-188 (305)
87 2wj5_A Heat shock protein beta 20.4 41 0.0014 21.0 1.4 23 27-50 18-42 (101)
No 1
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=99.40 E-value=1.3e-12 Score=78.75 Aligned_cols=66 Identities=12% Similarity=0.181 Sum_probs=60.7
Q ss_pred ceEEEEEeCCChHhhHHHHHHHHcCCCCeeEEEecCCCCCcEEEEEEccHHHHHHHHHhccCceEEEec
Q 047835 3 KKILYRLDNMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGDIDEVALANMLRRKIGYVETMKL 71 (101)
Q Consensus 3 q~vvlKV~m~C~e~C~~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~vDp~~l~~~LrKk~~~aeivsv 71 (101)
+++.|+|.|+| .+|.+++.++|.+++|| ++.+|... ++++|.|++++..|.+.|++.+-.+.+++.
T Consensus 2 ~~~~~~vgm~C-~~C~~~i~~~l~~~~gV-~v~v~~~~-~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~~ 67 (68)
T 3iwl_A 2 PKHEFSVDMTC-GGCAEAVSRVLNKLGGV-KYDIDLPN-KKVCIESEHSMDTLLATLKKTGKTVSYLGL 67 (68)
T ss_dssp CEEEEEECCCS-HHHHHHHHHHHHHHCSE-EEEEETTT-TEEEEEESSCHHHHHHHHHTTCSCEEEEEC
T ss_pred ceEEEEECcCc-HHHHHHHHHHHHcCCCe-EEEEEcCC-CEEEEEecCCHHHHHHHHHHcCCceEecCC
Confidence 56788889999 99999999999999999 99999977 899999999999999999986668888875
No 2
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=99.40 E-value=2.9e-12 Score=77.51 Aligned_cols=68 Identities=9% Similarity=0.117 Sum_probs=61.6
Q ss_pred CcceEEEEEeCCChHhhHHHHHHHHcCCC-CeeEEEecCCCCCcEEEEEEccHHHHHHHHHhccCceEEEe
Q 047835 1 MRKKILYRLDNMHSPKCRTKAFKIIAGFP-GLLSVAMKGDDLRHMEVIGDIDEVALANMLRRKIGYVETMK 70 (101)
Q Consensus 1 M~q~vvlKV~m~C~e~C~~Kv~k~l~~~~-GV~sV~id~~~k~kvtV~G~vDp~~l~~~LrKk~~~aeivs 70 (101)
|++++.|+|+|+| .+|.+++.++|.+++ ||.++.+|... ++++|.|.+++..+.+.+++.+-.+.++.
T Consensus 3 ~m~~~~~~v~m~C-~~C~~~ie~~l~~~~~GV~~~~v~~~~-~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (73)
T 1cc8_A 3 EIKHYQFNVVMTC-SGCSGAVNKVLTKLEPDVSKIDISLEK-QLVDVYTTLPYDFILEKIKKTGKEVRSGK 71 (73)
T ss_dssp CCEEEEEEECCCS-HHHHHHHHHHHHTTTTSEEEEEEETTT-TEEEEEESSCHHHHHHHHHTTSSCEEEEE
T ss_pred CceEEEEEEeeEC-HHHHHHHHHHHHhCCCCceEEEEECCC-CEEEEEEeCCHHHHHHHHHHhCCCceeee
Confidence 4588999999999 999999999999999 99999999976 89999999999999999998655777765
No 3
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.18 E-value=2.5e-10 Score=74.10 Aligned_cols=71 Identities=11% Similarity=0.107 Sum_probs=62.9
Q ss_pred cceEEEEEeCCChHhhHHHHHHHHcCCCCeeEEEecCCCCCcEEEEEEccHHHHHHHHHhccCceEEEecCCC
Q 047835 2 RKKILYRLDNMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGDIDEVALANMLRRKIGYVETMKLDIL 74 (101)
Q Consensus 2 ~q~vvlKV~m~C~e~C~~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~vDp~~l~~~LrKk~~~aeivsv~p~ 74 (101)
.+++.|+|.|+| ..|..+|.++|.+++||.++.+|... ++++|.+.+++..|.+.|++.+-.+.++..+..
T Consensus 18 ~~~~~l~V~m~C-~~C~~~Ie~aL~~l~GV~~v~vdl~~-~~~~V~~~~~~~~i~~~i~~~Gy~~~~~~~~~~ 88 (98)
T 2crl_A 18 LCTLEFAVQMTC-QSCVDAVRKSLQGVAGVQDVEVHLED-QMVLVHTTLPSQEVQALLEGTGRQAVLKGMGSG 88 (98)
T ss_dssp CEEEEEEECCCS-HHHHHHHHHTTTTCTTCCEEEEETTT-TEEEEEESSCHHHHHHHHHTTTSCEEEEESCCC
T ss_pred ceEEEEEEeeEC-HHHHHHHHHHHHcCCCceEEEEECCC-CEEEEEEeCCHHHHHHHHHHhCCceEEccCCCC
Confidence 467889999999 99999999999999999999999976 899999999999999999986557888775543
No 4
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=99.11 E-value=5.1e-10 Score=66.32 Aligned_cols=65 Identities=18% Similarity=0.193 Sum_probs=57.2
Q ss_pred cceEEEEEe-CCChHhhHHHHHHHHcCCCCeeEEEecCCCCCcEEEE--EEccHHHHHHHHHhccCceEE
Q 047835 2 RKKILYRLD-NMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVI--GDIDEVALANMLRRKIGYVET 68 (101)
Q Consensus 2 ~q~vvlKV~-m~C~e~C~~Kv~k~l~~~~GV~sV~id~~~k~kvtV~--G~vDp~~l~~~LrKk~~~aei 68 (101)
.|++.|+|+ |+| .+|..++.++|.+++||.++.+|... ++++|. +.+++..+.+.|++.+-.+++
T Consensus 1 a~~~~~~v~gm~C-~~C~~~i~~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~ 68 (69)
T 4a4j_A 1 AQTINLQLEGMDC-TSCASSIERAIAKVPGVQSCQVNFAL-EQAVVSYHGETTPQILTDAVERAGYHARV 68 (69)
T ss_dssp CEEEEEEEESCCS-HHHHHHHHHHHHTSTTEEEEEEETTT-TEEEEEECTTCCHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEEECCeec-HHHHHHHHHHHhcCCCeEEEEEEecC-CEEEEEECCCCCHHHHHHHHHHcCCceEe
Confidence 378899996 999 99999999999999999999999976 799998 569999999999985545554
No 5
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=99.03 E-value=2.1e-09 Score=64.56 Aligned_cols=67 Identities=12% Similarity=0.136 Sum_probs=58.9
Q ss_pred cceEEEEEe-CCChHhhHHHHHHHHcCCCCeeEEEecCCCCCcEEEEEE---ccHHHHHHHHHhccCceEEEe
Q 047835 2 RKKILYRLD-NMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGD---IDEVALANMLRRKIGYVETMK 70 (101)
Q Consensus 2 ~q~vvlKV~-m~C~e~C~~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~---vDp~~l~~~LrKk~~~aeivs 70 (101)
++++.|+|+ |+| .+|..++.++|.+++||.++.+|... ++++|..+ +++..+...|++.+-.+++++
T Consensus 1 M~~~~~~v~gm~C-~~C~~~ie~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (74)
T 3dxs_X 1 MRKIQVGVTGMTC-AACSNSVEAALMNVNGVFKASVALLQ-NRADVVFDPNLVKEEDIKEEIEDAGFEAEILA 71 (74)
T ss_dssp CEEEEEEEECCCS-HHHHHHHHHHHHTSTTEEEEEEEGGG-TEEEEEECTTTCCHHHHHHHHHHHTCEEEEEE
T ss_pred CcEEEEEECCcCC-HHHHHHHHHHHhcCCCEEEEEEEecC-CEEEEEECCCCCCHHHHHHHHHHCCCceEEcc
Confidence 367889995 999 99999999999999999999999976 79999865 699999999998666888776
No 6
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=98.98 E-value=6.5e-09 Score=60.32 Aligned_cols=65 Identities=18% Similarity=0.154 Sum_probs=54.3
Q ss_pred CcceEEEEEe-CCChHhhHHHHHHHHcCCCCeeEEEecCCCCCcEEEEEE--ccHHHHHHHHHhccCceE
Q 047835 1 MRKKILYRLD-NMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGD--IDEVALANMLRRKIGYVE 67 (101)
Q Consensus 1 M~q~vvlKV~-m~C~e~C~~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~--vDp~~l~~~LrKk~~~ae 67 (101)
|++++.|+|. |+| .+|..++.+.+.+++||.++.+|... ++++|..+ +++..+...+.+.+-.+.
T Consensus 1 m~~~~~~~v~gm~C-~~C~~~i~~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~i~~~i~~~G~~~~ 68 (71)
T 2xmw_A 1 MAQTINLQLEGMRC-AACASSIERAIAKVPGVQSCQVNFAL-EQAVVSYHGETTPQILTDAVERAGYHAR 68 (71)
T ss_dssp -CEEEEEEEECCCS-HHHHHHHHHHHHTSTTEEEEEEETTT-TEEEEEEC---CHHHHHHHHHHHTCEEE
T ss_pred CCcEEEEEECCccc-HHHHHHHHHHHhcCCCeEEEEEEccC-CEEEEEECCCCCHHHHHHHHHHcCCCce
Confidence 8899999997 999 99999999999999999999999976 79999755 678888888887443443
No 7
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=98.98 E-value=1.9e-09 Score=65.35 Aligned_cols=66 Identities=11% Similarity=0.028 Sum_probs=58.4
Q ss_pred CcceEEEEEe-CCChHhhHHHHHHHHcCCCCeeEEEecCCCCCcEEEEEEccHHHHHHHHHhccCceEEEe
Q 047835 1 MRKKILYRLD-NMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGDIDEVALANMLRRKIGYVETMK 70 (101)
Q Consensus 1 M~q~vvlKV~-m~C~e~C~~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~vDp~~l~~~LrKk~~~aeivs 70 (101)
|++++.|+|. |+| .+|..++.++|.+ +||.++.+|... ++++|.++ ++..|...|++.+-.+.+++
T Consensus 3 ~m~~~~~~v~gm~C-~~C~~~ie~~l~~-~gv~~~~v~~~~-~~~~v~~~-~~~~i~~~i~~~Gy~~~~~~ 69 (73)
T 3fry_A 3 SVEKIVLELSGLSC-HHCVARVKKALEE-AGAKVEKVDLNE-AVVAGNKE-DVDKYIKAVEAAGYQAKLRS 69 (73)
T ss_dssp CCEEEEEEEESSBC-GGGHHHHHHHHHH-TTCEEEEECSSE-EEEEEEGG-GHHHHHHHHHHTTCEEEECC
T ss_pred ccEEEEEEECCCCC-HHHHHHHHHHhcc-CCcEEEEEEccC-CEEEEEEC-CHHHHHHHHHHcCCceEecC
Confidence 5678899996 999 9999999999999 999999999976 79999999 99999999998555666655
No 8
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=98.83 E-value=8.1e-09 Score=60.24 Aligned_cols=60 Identities=18% Similarity=0.204 Sum_probs=52.0
Q ss_pred EEEEe-CCChHhhHHHHHHHHcCCCCeeEEEecCCCCCcEEEEEEccHHHHHHHHHhccCceE
Q 047835 6 LYRLD-NMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGDIDEVALANMLRRKIGYVE 67 (101)
Q Consensus 6 vlKV~-m~C~e~C~~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~vDp~~l~~~LrKk~~~ae 67 (101)
.|+|. |+| ..|..++.+.|.+++||.++.+|... ++++|.|.+++..+.+.+++.+-.+.
T Consensus 3 ~~~v~gm~C-~~C~~~i~~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~i~~~i~~~Gy~~~ 63 (66)
T 2roe_A 3 KLKVEGMTC-NHCVMAVTKALKKVPGVEKVEVSLEK-GEALVEGTADPKALVQAVEEEGYKAE 63 (66)
T ss_dssp CEEEECCCS-HHHHHHHHHHHHTSTTCCCEEECSSS-CBEEECSCCCHHHHHHHHHTTTCEEE
T ss_pred EEEECCeEc-HHHHHHHHHHHHcCCCeEEEEEEeCC-CEEEECCCCCHHHHHHHHHHcCCCcE
Confidence 46775 999 99999999999999999999999976 89999777999999999988443443
No 9
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=98.75 E-value=1.4e-08 Score=57.78 Aligned_cols=56 Identities=11% Similarity=0.150 Sum_probs=50.7
Q ss_pred EEEEE-eCCChHhhHHHHHHHHcCCCCeeEEEecCCCCCcEEEEEEccHHHHHHHHHhc
Q 047835 5 ILYRL-DNMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGDIDEVALANMLRRK 62 (101)
Q Consensus 5 vvlKV-~m~C~e~C~~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~vDp~~l~~~LrKk 62 (101)
+.|+| .|+| ..|..++.+.|.+++||.++.+|... ++++|.+.+++..+.+.|++.
T Consensus 3 ~~~~v~gm~C-~~C~~~i~~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~i~~~i~~~ 59 (64)
T 2xmm_A 3 IQLTVPTIAC-EACAEAVTKAVQNEDAQATVQVDLTS-KKVTITSALGEEQLRTAIASA 59 (64)
T ss_dssp EEEECTTCCS-HHHHHHHHHHHHHHCTTCEEEECTTT-CEEEEECSSCHHHHHHHHHHT
T ss_pred EEEEECCcCc-HHHHHHHHHHHhcCCCcEEEEEEecC-CEEEEEecCCHHHHHHHHHHc
Confidence 46788 4999 99999999999999999999999976 899999889999999999874
No 10
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.73 E-value=5.1e-08 Score=72.47 Aligned_cols=70 Identities=14% Similarity=0.132 Sum_probs=61.3
Q ss_pred ceEEEEEeCCChHhhHHHHHHHHcCCCCeeEEEecCCCCCcEEEEEEccHHHHHHHHHhccCceEEEecCCC
Q 047835 3 KKILYRLDNMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGDIDEVALANMLRRKIGYVETMKLDIL 74 (101)
Q Consensus 3 q~vvlKV~m~C~e~C~~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~vDp~~l~~~LrKk~~~aeivsv~p~ 74 (101)
.++.|+|.|+| ..|.+++.++|.+++||.++++|... ++++|.+.+++..|.+.|++.+-.+.++..+..
T Consensus 6 ~~~~l~V~MtC-~~Ca~~IekaL~~l~GV~~v~Vnl~~-~~v~V~~~~~~~~I~~aI~~~Gy~a~~~~~~~~ 75 (222)
T 1qup_A 6 YEATYAIPMHC-ENCVNDIKACLKNVPGINSLNFDIEQ-QIMSVESSVAPSTIINTLRNCGKDAIIRGAGKP 75 (222)
T ss_dssp EEEEEECCCCS-TTHHHHHHHHHTTCTTEEEEEEETTT-TEEEEEESSCHHHHHHHHHHTTCCCEEECCSCT
T ss_pred eEEEEEEcccc-HHHHHHHHHHHhcCCCeeEEEEEcCC-CEEEEeccCCHHHHHHHHHHcCCccccccCCCc
Confidence 45678889999 99999999999999999999999976 899999999999999999986557777765544
No 11
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=98.70 E-value=7.8e-08 Score=56.70 Aligned_cols=51 Identities=20% Similarity=0.317 Sum_probs=46.1
Q ss_pred CcceEEEEEe-CCChHhhHHHHHHHHcCCCCeeEEEecCCCCCcEEEEEEccHH
Q 047835 1 MRKKILYRLD-NMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGDIDEV 53 (101)
Q Consensus 1 M~q~vvlKV~-m~C~e~C~~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~vDp~ 53 (101)
|++++.|+|. |+| ..|..++.+.|.+++||.++.+|... ++++|.++.+..
T Consensus 1 m~~~~~~~v~gm~C-~~C~~~ie~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~ 52 (71)
T 2aj0_A 1 MAEKTVYRVDGLSC-TNCAAKFERNVKEIEGVTEAIVNFGA-SKITVTGEASIQ 52 (71)
T ss_dssp CCCEEEEEEESCCC-HHHHHHHHHHHHHSTTEEEEEECCSS-EEEEEEESCCHH
T ss_pred CCeEEEEEECCccc-HHHHHHHHHHHHcCCCeEEEEEECCC-CEEEEEecCcHH
Confidence 7888999997 999 99999999999999999999999976 899998876533
No 12
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=98.66 E-value=2.9e-07 Score=53.44 Aligned_cols=59 Identities=10% Similarity=0.186 Sum_probs=51.3
Q ss_pred cceEEEEEe-CCChHhhHHHHHHHHcCCCCeeEEEecCCCCCcEEEEEE---ccHHHHHHHHHhc
Q 047835 2 RKKILYRLD-NMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGD---IDEVALANMLRRK 62 (101)
Q Consensus 2 ~q~vvlKV~-m~C~e~C~~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~---vDp~~l~~~LrKk 62 (101)
++++.|+|. |+| .+|..++.+.|.+++||.++.+|... ++++|..+ +++..+...|.+.
T Consensus 4 ~~~~~~~v~gm~C-~~C~~~i~~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~~ 66 (71)
T 2l3m_A 4 MEQLTLQVEGMSC-GHCVNAIESSVKELNGVEQVKVQLAE-GTVEVTIDSSVVTLKDIVAVIEDQ 66 (71)
T ss_dssp EEEEEEEEECCCS-HHHHHHHHHHHHTSTTEEEEEEETTT-TEEEEEEETTTSCHHHHHHHHHHT
T ss_pred cEEEEEEECCccC-HHHHHHHHHHHHcCCCeEEEEEEecC-CEEEEEECCCCCCHHHHHHHHHHc
Confidence 356788885 999 99999999999999999999999976 89999754 6788898888874
No 13
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=98.64 E-value=1.4e-07 Score=54.77 Aligned_cols=63 Identities=13% Similarity=0.086 Sum_probs=53.3
Q ss_pred cceEEEEE-eCCChHhhHHHHHHHHcCCCCeeEEEecCCCCCcEEEEEE---ccHHHHHHHHHhccCce
Q 047835 2 RKKILYRL-DNMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGD---IDEVALANMLRRKIGYV 66 (101)
Q Consensus 2 ~q~vvlKV-~m~C~e~C~~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~---vDp~~l~~~LrKk~~~a 66 (101)
.+++.|+| .|+| ..|..++.+.+.+++||.++.+|... ++++|..+ +++..+.+.+.+.+-.+
T Consensus 2 ~~~~~~~v~gm~C-~~C~~~i~~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 68 (72)
T 1aw0_A 2 TQETVINIDGMTC-NSCVQSIEGVISKKPGVKSIRVSLAN-SNGTVEYDPLLTSPETLRGAIEDMGFDA 68 (72)
T ss_dssp CEEEEEEEECCCH-HHHHHHHHHHHHTSTTCCCEEEETTT-TEEEEEECTTTCCHHHHHHHHHHHTCEE
T ss_pred CeEEEEEECCeec-HHHHHHHHHHHhcCCCeEEEEEEccC-CEEEEEECCCcCCHHHHHHHHHHCCCCc
Confidence 35778899 5999 99999999999999999999999976 89999876 67888998888743233
No 14
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=98.64 E-value=2.9e-07 Score=53.44 Aligned_cols=65 Identities=8% Similarity=0.132 Sum_probs=54.6
Q ss_pred eEEEEEe-CCChHhhHHHHHHHHcCCCCeeEEEecCCCCCcEEEEEE--ccHHHHHHHHHhccCceEEEe
Q 047835 4 KILYRLD-NMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGD--IDEVALANMLRRKIGYVETMK 70 (101)
Q Consensus 4 ~vvlKV~-m~C~e~C~~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~--vDp~~l~~~LrKk~~~aeivs 70 (101)
++.|+|. |+| ..|..++.+.+.+++||.++.+|... ++++|..+ +++..+...+++.+-.+.++.
T Consensus 3 ~~~~~v~gm~C-~~c~~~i~~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~~ 70 (72)
T 1fvq_A 3 EVILAVHGMTC-SACTNTINTQLRALKGVTKCDISLVT-NECQVTYDNEVTADSIKEIIEDCGFDCEILR 70 (72)
T ss_dssp EEEEEECSCCS-HHHHHHHHHHHHTSSSEEEECCBTTT-TEEEEEECTTSCHHHHHHHHHHHTCCEEEEE
T ss_pred EEEEEECCeec-HHHHHHHHHHHhcCCCeEEEEEEecC-CEEEEEECCCCCHHHHHHHHHHCCCceEEcc
Confidence 5678885 999 99999999999999999999999976 79999865 678889999988544666653
No 15
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=98.63 E-value=2.1e-07 Score=54.05 Aligned_cols=63 Identities=14% Similarity=0.072 Sum_probs=52.9
Q ss_pred ceEEEEEe-CCChHhhHHHHHHHHcCCCCeeEEEecCCCCCcEEEEEE---ccHHHHHHHHHhccCceE
Q 047835 3 KKILYRLD-NMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGD---IDEVALANMLRRKIGYVE 67 (101)
Q Consensus 3 q~vvlKV~-m~C~e~C~~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~---vDp~~l~~~LrKk~~~ae 67 (101)
+++.|+|. |+| ..|..++.+.+.+++||.++.+|... ++++|..+ +++..+...+.+.+-.+.
T Consensus 3 ~~~~~~v~gm~C-~~C~~~i~~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~~G~~~~ 69 (72)
T 1osd_A 3 QTVTLSVPGMTC-SACPITVKKAISKVEGVSKVDVTFET-RQAVVTFDDAKTSVQKLTKATADAGYPSS 69 (72)
T ss_dssp EEEEEECTTCCS-TTHHHHHHHHHHTSTTEEEEEEETTT-TEEEEEEETTTCCHHHHHHHHHHTTCCCE
T ss_pred eEEEEEECCeEc-HHHHHHHHHHHhcCCCeEEEEEEecC-CEEEEEECCCCCCHHHHHHHHHhcCCCeE
Confidence 46778885 999 99999999999999999999999976 79999876 578889998887443443
No 16
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=98.61 E-value=6.4e-07 Score=52.74 Aligned_cols=66 Identities=9% Similarity=0.057 Sum_probs=55.0
Q ss_pred ceEEEEE-eCCChHhhHHHHHHHHcCCCCeeEEEecCCCCCcEEEEEE---ccHHHHHHHHHhccCceEEEe
Q 047835 3 KKILYRL-DNMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGD---IDEVALANMLRRKIGYVETMK 70 (101)
Q Consensus 3 q~vvlKV-~m~C~e~C~~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~---vDp~~l~~~LrKk~~~aeivs 70 (101)
+++.|+| .|+| ..|..++.+.+.+++||.++.+|... ++++|..+ +++..+...+.+.+-.+.+..
T Consensus 2 ~~~~~~v~gm~C-~~C~~~i~~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (75)
T 3cjk_B 2 NSVTISVEGMTC-NSCVWTIEQQIGKVNGVHHIKVSLEE-KNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN 71 (75)
T ss_dssp EEEEEEECCCCS-HHHHHHHHHHHHTSTTEEEEEEETTT-TEEEEEECTTTCCHHHHHHHHHHTTCCEEEEE
T ss_pred cEEEEEECCccC-HHHHHHHHHHHhcCCCeEEEEEEecC-CEEEEEECCCCCCHHHHHHHHHHcCCceEeec
Confidence 5677888 5999 99999999999999999999999976 79999865 578889999988543565544
No 17
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.61 E-value=1.6e-07 Score=71.04 Aligned_cols=70 Identities=14% Similarity=0.132 Sum_probs=61.7
Q ss_pred ceEEEEEeCCChHhhHHHHHHHHcCCCCeeEEEecCCCCCcEEEEEEccHHHHHHHHHhccCceEEEecCCC
Q 047835 3 KKILYRLDNMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGDIDEVALANMLRRKIGYVETMKLDIL 74 (101)
Q Consensus 3 q~vvlKV~m~C~e~C~~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~vDp~~l~~~LrKk~~~aeivsv~p~ 74 (101)
.++.|+|.|+| ..|..++.++|.+++||.++++|... ++++|.+.+++..|...|++.+-.+.++..+..
T Consensus 7 ~~~~l~V~MtC-~~Ca~~IekaL~~l~GV~~v~Vnl~~-~~v~V~~~~~~~~I~~aIe~~Gy~a~~~~~~~~ 76 (249)
T 1jk9_B 7 YEATYAIPMHC-ENCVNDIKACLKNVPGINSLNFDIEQ-QIMSVESSVAPSTIINTLRNCGKDAIIRGAGKP 76 (249)
T ss_dssp EEEEEECCCCS-SSHHHHHHHHHTTCTTEEEEEEETTT-TEEEEEESSCHHHHHHHHHTTTCCCEEEEESST
T ss_pred eeEEEEEeecc-HHHHHHHHHHHhccCCeeEEEEEcCC-CeEEEecCCCHHHHHHHHHHhCCCcccccCCcc
Confidence 35778889999 99999999999999999999999976 899999889999999999986557777776554
No 18
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=98.57 E-value=4.6e-07 Score=52.94 Aligned_cols=65 Identities=9% Similarity=0.007 Sum_probs=53.1
Q ss_pred cceEEEEEe-CCChHhhHHHHHHHHcCCCCeeEEEecCCCCCcEEEEEE---ccHHHHHHHHHhccCceEE
Q 047835 2 RKKILYRLD-NMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGD---IDEVALANMLRRKIGYVET 68 (101)
Q Consensus 2 ~q~vvlKV~-m~C~e~C~~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~---vDp~~l~~~LrKk~~~aei 68 (101)
.+++.|+|. |+| ..|..++.+.+.+++||.++.+|... ++++|..+ +++..+...+.+.+-.+.+
T Consensus 3 ~~~~~~~v~gm~C-~~c~~~i~~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 71 (75)
T 1yjr_A 3 DGVLELVVRGMTC-ASCVHKIESSLTKHRGILYCSVALAT-NKAHIKYDPEIIGPRDIIHTIESLGFEPSL 71 (75)
T ss_dssp CCCEEEEEETCCT-TTHHHHHHHHHTTSTTEEEEEEETTT-TEEEEEECTTTTHHHHHHHHHHHHHCEEEE
T ss_pred ceEEEEEECCccc-HHHHHHHHHHHHcCCCEEEEEEEecC-CEEEEEECCCCCCHHHHHHHHHHcCCCcee
Confidence 456778885 999 99999999999999999999999976 79999876 5677888888774434443
No 19
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=98.57 E-value=7.5e-07 Score=50.33 Aligned_cols=57 Identities=11% Similarity=0.198 Sum_probs=49.3
Q ss_pred eEEEEEe-CCChHhhHHHHHHHHcCCCCeeEEEecCCCCCcEEEEEE---ccHHHHHHHHHhc
Q 047835 4 KILYRLD-NMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGD---IDEVALANMLRRK 62 (101)
Q Consensus 4 ~vvlKV~-m~C~e~C~~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~---vDp~~l~~~LrKk 62 (101)
+..|+|. |+| .+|..++.+.+.+++||.++.+|... ++++|..+ +++..+...+.+.
T Consensus 3 ~~~~~v~gm~C-~~c~~~i~~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~~ 63 (69)
T 2qif_A 3 QKTLQVEGMSC-QHCVKAVETSVGELDGVSAVHVNLEA-GKVDVSFDADKVSVKDIADAIEDQ 63 (69)
T ss_dssp EEEEEEECCCS-HHHHHHHHHHHHTSTTEEEEEEETTT-TEEEEEECTTTCCHHHHHHHHHHT
T ss_pred EEEEEECCccc-HHHHHHHHHHHhcCCCeeEEEEEecC-CEEEEEECCCCCCHHHHHHHHHHc
Confidence 4568886 999 99999999999999999999999976 79999754 6788888888763
No 20
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=98.52 E-value=9.6e-08 Score=60.18 Aligned_cols=58 Identities=14% Similarity=0.113 Sum_probs=52.4
Q ss_pred ceEEEEEe-CCChHhhHHHHHHHHcCCCCeeEEEecCCCCCcEEEEEEccHHHHHHHHHhc
Q 047835 3 KKILYRLD-NMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGDIDEVALANMLRRK 62 (101)
Q Consensus 3 q~vvlKV~-m~C~e~C~~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~vDp~~l~~~LrKk 62 (101)
+++.|+|. |+| ..|..++.+.|.+++||.++.+|... ++++|.+.+++..|...|++.
T Consensus 22 ~~~~l~V~Gm~C-~~C~~~Ie~aL~~~~GV~~v~v~l~~-~~~~V~~~~~~~~i~~~i~~~ 80 (85)
T 2k2p_A 22 AGLSFHVEDMTC-GHCAGVIKGAIEKTVPGAAVHADPAS-RTVVVGGVSDAAHIAEIITAA 80 (85)
T ss_dssp CEEEEECTTCCH-HHHHHHHHHHHHHHSTTCEEEEETTT-TEEEEESCCCHHHHHHHHHHT
T ss_pred cEEEEEECCCCC-HHHHHHHHHHHhcCCCeeEEEEECCC-CEEEEEecCCHHHHHHHHHHc
Confidence 45678885 999 99999999999999999999999976 899999889999999999874
No 21
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=98.47 E-value=5.7e-07 Score=51.16 Aligned_cols=56 Identities=13% Similarity=0.162 Sum_probs=48.1
Q ss_pred EEEEEe-CCChHhhHHHHHHHHcCCCCeeEEEecCCCCCcEEEEEE--ccHHHHHHHHHhc
Q 047835 5 ILYRLD-NMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGD--IDEVALANMLRRK 62 (101)
Q Consensus 5 vvlKV~-m~C~e~C~~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~--vDp~~l~~~LrKk 62 (101)
+.|+|. |+| ..|..++.+.|.+++||.++.+|... ++++|..+ .++..+...+++.
T Consensus 3 ~~~~v~gm~C-~~C~~~i~~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~i~~~i~~~ 61 (66)
T 1yg0_A 3 ATFQVPSITC-NHCVDKIEKFVGEIEGVSFIDVSVEK-KSVVVEFDAPATQDLIKEALLDA 61 (66)
T ss_dssp EEECCTTCSC-SHHHHHHHHHHTTSSSEEEEEEETTT-TEEEEEECTTCCHHHHHHHHHHH
T ss_pred EEEEECCccc-HHHHHHHHHHHhcCCCceEEEEEcCC-CEEEEEECCCCCHHHHHHHHHHc
Confidence 456775 999 99999999999999999999999976 89999876 5778888888763
No 22
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=98.46 E-value=1.7e-06 Score=50.87 Aligned_cols=58 Identities=12% Similarity=0.171 Sum_probs=48.3
Q ss_pred ceEEEEEe-CCChHhhHHHHHHHHcCCCCeeEEEecCCCCCcEEEEEEc-cHHHHHHHHHhc
Q 047835 3 KKILYRLD-NMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGDI-DEVALANMLRRK 62 (101)
Q Consensus 3 q~vvlKV~-m~C~e~C~~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~v-Dp~~l~~~LrKk 62 (101)
+++.|+|. |+| ..|..++.+.|.+++||.++.+|... ++++|..+- ....+...+...
T Consensus 3 ~~~~~~v~gm~C-~~C~~~ie~~l~~~~gV~~~~v~~~~-~~~~v~~~~~~~~~i~~~i~~~ 62 (73)
T 1mwy_A 3 TRYSWKVSGMDC-AACARKVENAVRQLAGVNQVQVLFAT-EKLVVDADNDIRAQVESALQKA 62 (73)
T ss_dssp EEEEEEEESCCS-TTHHHHHHHHHHTSSSEEEEEEETTT-TEEEEEESSCCHHHHHHHHHHH
T ss_pred eEEEEEECCcCC-HHHHHHHHHHHhcCCCeeEEEEEecC-CEEEEEECCCCHHHHHHHHHHc
Confidence 35678886 999 99999999999999999999999976 799998763 356677777763
No 23
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=98.44 E-value=9.4e-07 Score=50.51 Aligned_cols=61 Identities=10% Similarity=0.121 Sum_probs=50.6
Q ss_pred EEEE-eCCChHhhHHHHHHHHcCCCCeeEEEecCCCCCcEEEEEE---ccHHHHHHHHHhccCceEE
Q 047835 6 LYRL-DNMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGD---IDEVALANMLRRKIGYVET 68 (101)
Q Consensus 6 vlKV-~m~C~e~C~~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~---vDp~~l~~~LrKk~~~aei 68 (101)
.|+| .|+| ..|..++.+.+.+++||.++.+|... ++++|..+ +++..+.+.+.+.+-.+++
T Consensus 3 ~~~v~gm~C-~~C~~~i~~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 67 (68)
T 1cpz_A 3 EFSVKGMSC-NHCVARIEEAVGRISGVKKVKVQLKK-EKAVVKFDEANVQATEICQAINELGYQAEV 67 (68)
T ss_dssp EEEESCCCS-SSHHHHHHHHHHTSTTEEEEEEETTT-TEEEEEECTTTCCHHHHHHHHHTTSSCEEE
T ss_pred EEEECCeeC-HHHHHHHHHHHHcCCCeEEEEEEecC-CEEEEEECCCCCCHHHHHHHHHHcCCCccc
Confidence 4566 4999 99999999999999999999999976 89999875 6888899988874434443
No 24
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=98.44 E-value=5.8e-07 Score=53.57 Aligned_cols=65 Identities=9% Similarity=0.054 Sum_probs=54.0
Q ss_pred ceEEEEE-eCCChHhhHHHHHHHHcCCCCeeEEEecCCCCCcEEEEEE---ccHHHHHHHHHhccCceEEE
Q 047835 3 KKILYRL-DNMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGD---IDEVALANMLRRKIGYVETM 69 (101)
Q Consensus 3 q~vvlKV-~m~C~e~C~~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~---vDp~~l~~~LrKk~~~aeiv 69 (101)
+++.|+| .|+| ..|..++.+.+.+++||.++.+|... ++++|..+ +++..+...+.+.+-.+.+.
T Consensus 8 ~~~~~~v~gm~C-~~C~~~i~~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 76 (79)
T 1kvi_A 8 NSVTISVEGMTC-NSCVWTIEQQIGKVNGVHHIKVSLEE-KNATIIYDPKLQTPKTLQEAIDDMGFDAVIH 76 (79)
T ss_dssp EEEEEEECCCCS-TTTHHHHHHHHHHSSSCCCEEEEGGG-TEEEEEECTTTCCHHHHHHHHHHHCCCEEEC
T ss_pred EEEEEEECCccC-HHHHHHHHHHHhcCCCeEEEEEEccC-CEEEEEECCCCCCHHHHHHHHHHCCCceEec
Confidence 5677888 5999 99999999999999999999999976 79999765 57888999888744355543
No 25
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=98.43 E-value=7.1e-07 Score=53.08 Aligned_cols=66 Identities=14% Similarity=0.087 Sum_probs=54.3
Q ss_pred cceEEEEE-eCCChHhhHHHHHHHHcCCCCeeEEEecCCCCCcEEEEEE---ccHHHHHHHHHhccCceEEE
Q 047835 2 RKKILYRL-DNMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGD---IDEVALANMLRRKIGYVETM 69 (101)
Q Consensus 2 ~q~vvlKV-~m~C~e~C~~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~---vDp~~l~~~LrKk~~~aeiv 69 (101)
++++.|+| .|+| ..|..++.+.|.+++||.++.+|... ++++|..+ +++..+...+.+.+-.+.++
T Consensus 2 m~~~~~~v~gm~C-~~C~~~ie~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 71 (77)
T 1y3j_A 2 SSKCYIQVTGMTC-ASCVANIERNLRREEGIYSILVALMA-GKAEVRYNPAVIQPPMIAEFIRELGFGATVI 71 (77)
T ss_dssp CEEEEEEESCGGG-CSHHHHHHHHHTTSSSEEECCCBTTT-TBEEEEECTTTSCHHHHHHHHHHHTSCEEEE
T ss_pred CEEEEEEECCeeC-HHHHHHHHHHHhcCCCeEEEEEEecC-CEEEEEECCCCCCHHHHHHHHHHcCCceEEC
Confidence 35577888 5999 99999999999999999999999976 79999865 57888888888744345543
No 26
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=98.43 E-value=1.3e-06 Score=54.82 Aligned_cols=57 Identities=11% Similarity=0.183 Sum_probs=50.1
Q ss_pred eEEEEEe-CCChHhhHHHHHHHHcCCCCeeEEEecCCCCCcEEEEEE---ccHHHHHHHHHhc
Q 047835 4 KILYRLD-NMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGD---IDEVALANMLRRK 62 (101)
Q Consensus 4 ~vvlKV~-m~C~e~C~~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~---vDp~~l~~~LrKk 62 (101)
++.|+|. |+| ..|..++.++|.+++||.++.+|... ++++|..+ +++..+...|.+.
T Consensus 4 ~~~l~v~Gm~C-~~C~~~Ie~~L~~~~GV~~v~v~l~~-~~~~V~~~~~~~~~~~i~~~i~~~ 64 (90)
T 2g9o_A 4 TATFIIDGMHC-KSCVSNIESTLSALQYVSSIVVSLEN-RSAIVVYNASSVTPESLRKAIEAV 64 (90)
T ss_dssp EEEEEEESCCH-HHHHHHHHHHHTTCTTEEEEEEETTT-TEEEEEECCSSCCTHHHHHHHHTT
T ss_pred EEEEEECCcCC-HHHHHHHHHHHHcCCCeeEEEEEccC-CEEEEEECCCCCCHHHHHHHHHhc
Confidence 4667775 999 99999999999999999999999977 79999764 6888999999886
No 27
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=98.42 E-value=9e-07 Score=54.10 Aligned_cols=64 Identities=8% Similarity=0.065 Sum_probs=53.4
Q ss_pred ceEEEEE-eCCChHhhHHHHHHHHcCCCCeeEEEecCCCCCcEEEEEE---ccHHHHHHHHHhccCceEE
Q 047835 3 KKILYRL-DNMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGD---IDEVALANMLRRKIGYVET 68 (101)
Q Consensus 3 q~vvlKV-~m~C~e~C~~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~---vDp~~l~~~LrKk~~~aei 68 (101)
+++.|+| .|+| ..|..++.+.|.+++||.++.+|... ++++|..+ +++..+...+.+.+-.+.+
T Consensus 9 ~~~~~~v~gm~C-~~C~~~ie~~l~~~~GV~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 76 (84)
T 1q8l_A 9 VVLKMKVEGMTC-HSCTSTIEGKIGKLQGVQRIKVSLDN-QEATIVYQPHLISVEEMKKQIEAMGFPAFV 76 (84)
T ss_dssp EEEEEEECCTTT-CSSCHHHHHHHHTCTTEEEEEECSTT-TEEEEEECTTTCCHHHHHHHHHHTTCCEEC
T ss_pred eEEEEEECCccc-HHHHHHHHHHHHcCCCeEEEEEEecC-CEEEEEECCCCCCHHHHHHHHHHcCCceEe
Confidence 4567888 5999 99999999999999999999999976 89999875 6888899999874434443
No 28
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=98.39 E-value=1e-06 Score=51.29 Aligned_cols=59 Identities=17% Similarity=0.253 Sum_probs=50.2
Q ss_pred ceEEEEEe-CCChHhhHHHHHHHHcCCCCeeEEEecCCCCCcEEEEEE---ccHHHHHHHHHhcc
Q 047835 3 KKILYRLD-NMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGD---IDEVALANMLRRKI 63 (101)
Q Consensus 3 q~vvlKV~-m~C~e~C~~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~---vDp~~l~~~LrKk~ 63 (101)
+++.|+|. |+| .+|..++.+.+.+++||.++.+|... ++++|.-+ +++..+...+.+.+
T Consensus 6 ~~~~~~v~gm~C-~~C~~~i~~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~~G 68 (76)
T 1opz_A 6 KEIAMQVSGMTC-AACAARIEKGLKRMPGVTDANVNLAT-ETVNVIYDPAETGTAAIQEKIEKLG 68 (76)
T ss_dssp EEEEEEEESCCS-TTHHHHHHHHHHTSTTEEEEEEEGGG-TEEEEEECTTTCCHHHHHHHHHHHT
T ss_pred eEEEEEECCccc-HHHHHHHHHHHhcCCCeEEEEEEecC-CEEEEEECCCCCCHHHHHHHHHHCC
Confidence 46678886 999 99999999999999999999999976 79988743 67888888887743
No 29
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=98.36 E-value=3.9e-07 Score=53.16 Aligned_cols=55 Identities=11% Similarity=0.151 Sum_probs=47.7
Q ss_pred EEEEE-eCCChHhhHHHHHHHHcCCCCeeEEEecCCCCCcEEEEEEccHHHHHHHHHhcc
Q 047835 5 ILYRL-DNMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGDIDEVALANMLRRKI 63 (101)
Q Consensus 5 vvlKV-~m~C~e~C~~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~vDp~~l~~~LrKk~ 63 (101)
..|+| .|+| .+|..++.+.|.++ ||.++.+|... ++++|.++.+ ..+...+++.+
T Consensus 3 ~~~~v~gm~C-~~C~~~i~~~l~~~-gv~~~~v~~~~-~~~~v~~~~~-~~i~~~i~~~G 58 (67)
T 2kyz_A 3 YVLYVPDISC-NHCKMRISKALEEL-GVKNYEVSVEE-KKVVVETENL-DSVLKKLEEID 58 (67)
T ss_dssp EEEECGGGGS-HHHHHHHHHHHHHH-TCSEEEEETTT-TEEEEECSCH-HHHHHHHHTTT
T ss_pred EEEEECCcCc-HHHHHHHHHHHHHc-CCeEEEEECCC-CEEEEEECCH-HHHHHHHHHcC
Confidence 46778 6999 99999999999999 99999999976 8999988766 77888887743
No 30
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=98.33 E-value=2.7e-06 Score=48.48 Aligned_cols=58 Identities=10% Similarity=0.205 Sum_probs=49.1
Q ss_pred ceEEEEEe-CCChHhhHHHHHHHHcCCCCeeEEEecCCCCCcEEEEEE---ccHHHHHHHHHhc
Q 047835 3 KKILYRLD-NMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGD---IDEVALANMLRRK 62 (101)
Q Consensus 3 q~vvlKV~-m~C~e~C~~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~---vDp~~l~~~LrKk 62 (101)
+++.|+|. |+| .+|..++.+.+.+++||.++.+|... ++++|..+ ++...+...+...
T Consensus 3 ~~~~~~v~gm~C-~~C~~~i~~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~~ 64 (71)
T 2ldi_A 3 KTQQMQVGGMRC-AACASSIERALERLKGVAEASVTVAT-GRLTVTYDPKQVSEITIQERIAAL 64 (71)
T ss_dssp EEEEEEEETCTT-SGGGHHHHTGGGGCSSEEEEEEETTT-TEEEEEECTTTCCTHHHHHHHHTT
T ss_pred EEEEEEECCccC-HHHHHHHHHHHhcCCCeeEEEEEecC-CEEEEEECCCCCCHHHHHHHHHHc
Confidence 35567886 999 99999999999999999999999976 79998754 5777888888763
No 31
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=98.32 E-value=4.3e-06 Score=49.38 Aligned_cols=64 Identities=9% Similarity=0.077 Sum_probs=52.2
Q ss_pred ceEEEEEe-CCChHhhHHHHHHHHcCCCCeeEEEecCCCCCcEEEEEE---ccHHHHHHHHHhccCceEE
Q 047835 3 KKILYRLD-NMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGD---IDEVALANMLRRKIGYVET 68 (101)
Q Consensus 3 q~vvlKV~-m~C~e~C~~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~---vDp~~l~~~LrKk~~~aei 68 (101)
.++.|+|. |+| ..|..++.+.|.+++||.++.+|... ++++|..+ +++..+...+.+.+-.+.+
T Consensus 3 ~~~~~~v~gm~C-~~C~~~i~~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 70 (80)
T 1jww_A 3 EKAEFDIEGMTC-AACANRIEKRLNKIEGVANAPVNFAL-ETVTVEYNPKEASVSDLKEAVDKLGYKLKL 70 (80)
T ss_dssp EEEEEEEESCCC-HHHHHHHHHHHHTSTTEEECCCCSSS-SEEEEEECTTTCCHHHHHHHHHHHTSEEEE
T ss_pred eEEEEEECCccC-HHHHHHHHHHHhcCCCeEEEEEEecC-CEEEEEECCCCCCHHHHHHHHHHcCCeEEe
Confidence 45678886 999 99999999999999999999999976 79998754 5788888888774334444
No 32
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.30 E-value=1.6e-06 Score=57.68 Aligned_cols=66 Identities=9% Similarity=0.049 Sum_probs=55.2
Q ss_pred ceEEEEE-eCCChHhhHHHHHHHHcCCCCeeEEEecCCCCCcEEEEEE---ccHHHHHHHHHhccCceEEEe
Q 047835 3 KKILYRL-DNMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGD---IDEVALANMLRRKIGYVETMK 70 (101)
Q Consensus 3 q~vvlKV-~m~C~e~C~~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~---vDp~~l~~~LrKk~~~aeivs 70 (101)
+++.|+| .|+| ..|..++.+.|.+++||.++.++... ++++|.-+ +++..|.+.|++.+-.+.+++
T Consensus 74 ~~~~~~v~gm~C-~~C~~~ie~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 143 (151)
T 1p6t_A 74 EKAEFDIEGMTC-AACANRIEKRLNKIEGVANAPVNFAL-ETVTVEYNPKEASVSDLKEAVDKLGYKLKLKG 143 (151)
T ss_dssp EEEEEEESSCCS-SSHHHHHHHHHTTSSSEEECCEETTT-TEEEEEECTTTCCHHHHHHHHHHHTCCEEESC
T ss_pred cccEEEecCCCC-HHHHHHHHHHHhcCCCceEEEEEccC-CEEEEEECCCCCCHHHHHHHHHHcCCCeEEcC
Confidence 4577888 5999 99999999999999999999999976 79999843 789999999988544565543
No 33
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=98.30 E-value=1.9e-06 Score=49.75 Aligned_cols=59 Identities=10% Similarity=0.039 Sum_probs=49.2
Q ss_pred EEEE-eCCChHhhHHHHHHHHcCCCCeeEEEecCCCCCcEEEEEE--ccHHHHHHHHHhccCce
Q 047835 6 LYRL-DNMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGD--IDEVALANMLRRKIGYV 66 (101)
Q Consensus 6 vlKV-~m~C~e~C~~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~--vDp~~l~~~LrKk~~~a 66 (101)
.|.| .|+| ..|..++.+.+.+++||.++.+|... ++++|..+ .++..+...+.+.+-.+
T Consensus 3 ~~~v~gm~C-~~C~~~i~~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~i~~~i~~~Gy~~ 64 (69)
T 2kt2_A 3 HLKITGMTC-DSCAAHVKEALEKVPGVQSALVSYPK-GTAQLAIVPGTSPDALTAAVAGLGYKA 64 (69)
T ss_dssp CEEEESSCS-THHHHHHHHHHHHSTTEEEEEEETTT-TEEEEEECTTSCHHHHHHHHHTTTSEE
T ss_pred EEEECCccc-HHHHHHHHHHHHcCCCeeEEEEEccC-CEEEEEECCCCCHHHHHHHHHHCCCce
Confidence 3566 5999 99999999999999999999999976 79998765 67888999988743333
No 34
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=98.27 E-value=2.2e-06 Score=56.49 Aligned_cols=63 Identities=10% Similarity=0.006 Sum_probs=53.2
Q ss_pred ceEEEEE-eCCChHhhHHHHHHHHcCCCCeeEEEecCCCCCcEEEEEE---ccHHHHHHHHHhccCceE
Q 047835 3 KKILYRL-DNMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGD---IDEVALANMLRRKIGYVE 67 (101)
Q Consensus 3 q~vvlKV-~m~C~e~C~~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~---vDp~~l~~~LrKk~~~ae 67 (101)
+++.|+| .|+| ..|..++.+.|.+++||.++.+|... ++++|..+ +++..+.+.|.+.+-.+.
T Consensus 80 ~~~~~~v~gm~C-~~C~~~ie~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~ 146 (149)
T 2ew9_A 80 GNIELTITGMTC-ASCVHNIESKLTRTNGITYASVALAT-SKALVKFDPEIIGPRDIIKIIEEIGFHAS 146 (149)
T ss_dssp SEEEEEEESCCS-HHHHHHHHHHHHHSSSCCEEEEETTT-TEEEEECCTTTSCHHHHHHHHHHHTCEEE
T ss_pred ceeEEEEEeccC-HHHHHHHHHHHhcCCCeEEEEEEcCC-CEEEEEECCCCCCHHHHHHHHHhCCCceE
Confidence 4577888 5999 99999999999999999999999976 79999865 688899999987443443
No 35
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=98.27 E-value=4.5e-06 Score=54.42 Aligned_cols=59 Identities=12% Similarity=0.164 Sum_probs=51.4
Q ss_pred ceEEEEEe-CCChHhhHHHHHHHHcCCCCeeEEEecCCCCCcEEEEEE---ccHHHHHHHHHhcc
Q 047835 3 KKILYRLD-NMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGD---IDEVALANMLRRKI 63 (101)
Q Consensus 3 q~vvlKV~-m~C~e~C~~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~---vDp~~l~~~LrKk~ 63 (101)
+++.|+|. |+| ..|..++.+.|.+++||.++.+|... ++++|..+ +++..+...|...+
T Consensus 8 ~~~~l~v~Gm~C-~~Ca~~Ie~~L~~~~GV~~v~v~~~~-~~~~V~~~~~~~~~~~i~~~i~~~G 70 (111)
T 2ofg_X 8 KTQQMQVGGMDC-TSCKLKIEGSLERLKGVAEASVTVAT-GRLTVTYDPKQVSEITIQERIAALG 70 (111)
T ss_dssp EEEEEEESCCCG-GGTHHHHHHHHTTSSSEEEEEEETTT-TEEEEEECTTTCSHHHHHHHHHTTT
T ss_pred eEEEEEECCcCC-HHHHHHHHHHHHcCCCeeEEEEECCC-CEEEEEECCCCCCHHHHHHHHHHcC
Confidence 45778886 999 99999999999999999999999976 79999866 57888999898743
No 36
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=98.19 E-value=1.1e-05 Score=50.35 Aligned_cols=66 Identities=14% Similarity=0.078 Sum_probs=53.8
Q ss_pred ceEEEEEe-CCChHhhHHHHHHHHcCCCCeeEEEecCCCCCcEEEEEE---ccHHHHHHHHHhccCceEEEe
Q 047835 3 KKILYRLD-NMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGD---IDEVALANMLRRKIGYVETMK 70 (101)
Q Consensus 3 q~vvlKV~-m~C~e~C~~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~---vDp~~l~~~LrKk~~~aeivs 70 (101)
.++.|.|. |+| ..|..++.+.+.+++||.++.+|... ++++|..+ +++..+...+...+-.+.+..
T Consensus 16 ~~~~~~v~gm~C-~~C~~~ie~~l~~~~GV~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 85 (95)
T 2kkh_A 16 QKSYFDVLGICC-TSEVPIIENILKSLDGVKEYSVIVPS-RTVIVVHDSLLISPFQIAKALNEARLEANVRV 85 (95)
T ss_dssp EEEEEEETTCCT-TTTHHHHHHHHHHSSSEEEEEEETTT-TEEEEEECTTTCCHHHHHHHHHHHTCCEEESC
T ss_pred EEEEEEECCcCC-HHHHHHHHHHHhcCCCeeEEEEEccC-CEEEEEECCCCCCHHHHHHHHHHcCCceEEec
Confidence 35678884 999 99999999999999999999999976 79999875 578888888887443455443
No 37
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=98.18 E-value=5.9e-06 Score=54.42 Aligned_cols=66 Identities=15% Similarity=0.140 Sum_probs=53.9
Q ss_pred CcceEEEEE-eCCChHhhHHHHHHHHcCCCCeeEEEecCCCCCcEEEEEE---ccHHHHHHHHHhccCceEE
Q 047835 1 MRKKILYRL-DNMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGD---IDEVALANMLRRKIGYVET 68 (101)
Q Consensus 1 M~q~vvlKV-~m~C~e~C~~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~---vDp~~l~~~LrKk~~~aei 68 (101)
=++++.|.| .|+| .+|..++.+++.+++||.++.++... ++++|..+ +++..+...+...+-.+.+
T Consensus 2 ~~~~~~~~v~gm~C-~~C~~~ie~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 71 (149)
T 2ew9_A 2 APQKCFLQIKGMTC-ASCVSNIERNLQKEAGVLSVLVALMA-GKAEIKYDPEVIQPLEIAQFIQDLGFEAAV 71 (149)
T ss_dssp CCEEEEEEEECCCS-SSHHHHHHHHHHTTSSCCCEEEETTT-TEEEEEECTTTCCHHHHHHHHHHHTCEEEE
T ss_pred CcEEEEEEECCeec-HHHHHHHHHHHhcCCCcEEEEEEecC-CEEEEEEcCCCCCHHHHHHHHhcCCCceEe
Confidence 057889999 5899 99999999999999999999999976 78888764 6778888888874434444
No 38
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.10 E-value=1.5e-05 Score=56.20 Aligned_cols=66 Identities=11% Similarity=0.111 Sum_probs=54.8
Q ss_pred ceEEEEEe-CCChHhhHHHHHHHHcCCCCeeEEEecCCCCCcEEEEEE---ccHHHHHHHHHhccCceEEEe
Q 047835 3 KKILYRLD-NMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGD---IDEVALANMLRRKIGYVETMK 70 (101)
Q Consensus 3 q~vvlKV~-m~C~e~C~~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~---vDp~~l~~~LrKk~~~aeivs 70 (101)
+++.|+|. |+| ..|..++.+.|.+++||.++.+|... ++++|..+ +++..+...|.+.+-.+.++.
T Consensus 122 ~~~~l~v~Gm~C-~~C~~~ie~~l~~~~GV~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 191 (202)
T 2rop_A 122 STTLIAIAGMTC-ASCVHSIEGMISQLEGVQQISVSLAE-GTATVLYNPAVISPEELRAAIEDMGFEASVVS 191 (202)
T ss_dssp EEEEEEESCCCS-THHHHHHHHHGGGSSSEEEEEEETTT-TEEEEEECTTTCCHHHHHHHHHHHTSCEEEC-
T ss_pred eEEEEEECCccC-HHHHHHHHHHHHcCCCeEEEEEEccC-CEEEEEECCCCCCHHHHHHHHHHcCCceEEcC
Confidence 45778885 999 99999999999999999999999976 79999764 688899999988543565543
No 39
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=97.82 E-value=5.1e-05 Score=53.43 Aligned_cols=58 Identities=19% Similarity=0.237 Sum_probs=50.9
Q ss_pred ceEEEEEe-CCChHhhHHHHHHHHcCCCCeeEEEecCCCCCcEEEEEE---ccHHHHHHHHHhc
Q 047835 3 KKILYRLD-NMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGD---IDEVALANMLRRK 62 (101)
Q Consensus 3 q~vvlKV~-m~C~e~C~~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~---vDp~~l~~~LrKk 62 (101)
+++.|+|. |+| .+|..++.+.|.+++||.++.++... ++++|..+ +++..+...+...
T Consensus 20 ~~~~l~v~Gm~C-~~C~~~ie~~l~~~~GV~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~~ 81 (202)
T 2rop_A 20 VTLQLRIDGMHC-KSCVLNIEENIGQLLGVQSIQVSLEN-KTAQVKYDPSCTSPVALQRAIEAL 81 (202)
T ss_dssp CEEEEEEESGGG-STHHHHHHHHTTSBTTEEEEEEETTT-TEEEEEECTTTCCHHHHHHHHTTS
T ss_pred EEEEEEECCeEc-HHHHHHHHHHHhcCCCeEEEEEEecC-CEEEEEECCCCCCHHHHHHHHHHh
Confidence 46678886 999 99999999999999999999999976 79999865 6788899988875
No 40
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=97.58 E-value=0.00034 Score=46.13 Aligned_cols=59 Identities=17% Similarity=0.287 Sum_probs=48.4
Q ss_pred cceEEEEEe-CCChHhhHHHHHHHHcCCCCeeEEEecCCCCCcEEEEEE---ccHHHHHHHHHhc
Q 047835 2 RKKILYRLD-NMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGD---IDEVALANMLRRK 62 (101)
Q Consensus 2 ~q~vvlKV~-m~C~e~C~~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~---vDp~~l~~~LrKk 62 (101)
.++..|.|. |+| .+|..++.+.+.+++||.++.++... ++++|..+ +++..+...++..
T Consensus 5 ~~~~~~~v~gm~C-~~C~~~ie~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~~ 67 (151)
T 1p6t_A 5 QKEIAMQVSGMTC-AACAARIEKGLKRMPGVTDANVNLAT-ETVNVIYDPAETGTAAIQEKIEKL 67 (151)
T ss_dssp CEEEEEEEESCCS-SHHHHHHHHHHTTSSSEEEEEEEGGG-TEEEEEECTTTSCHHHHHHHHHHH
T ss_pred ceEEEEEECCCcC-HHHHHHHHHHHhcCCCeeEEEEEccC-CEEEEEEcCCcCCHHHHHHHHHHc
Confidence 345667886 888 99999999999999999999999876 78888644 5778888878763
No 41
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=97.19 E-value=0.0011 Score=55.84 Aligned_cols=58 Identities=12% Similarity=0.080 Sum_probs=51.1
Q ss_pred eEEEEEe-CCChHhhHHHHHHHHcCCCCeeEEEecCCCCCcEEEEEE---ccHHHHHHHHHhcc
Q 047835 4 KILYRLD-NMHSPKCRTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGD---IDEVALANMLRRKI 63 (101)
Q Consensus 4 ~vvlKV~-m~C~e~C~~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~---vDp~~l~~~LrKk~ 63 (101)
++.++|+ |+| ..|..++.+.+.+++||.++.++... ++++|.-+ +++.++.+.+.+.+
T Consensus 3 ~~~l~V~GM~C-a~Ca~~Ie~~L~~~~GV~~v~Vnl~~-~~~~V~~d~~~~~~~~i~~ai~~~G 64 (723)
T 3j09_A 3 ERTVRVTGMTC-AMCVKSIETAVGSLEGVEEVRVNLAT-ETAFIRFDEKRIDFETIKRVIEDLG 64 (723)
T ss_dssp CEEEEEETCCS-HHHHHHHHHHHHTSTTEEEEEEETTT-TEEEEEECTTTCCHHHHHHHHHHHC
T ss_pred eEEEEeCCCCc-hHHHHHHHHHHhcCCCceEEEEEcCC-CEEEEEeCCCcCCHHHHHHHHHhcC
Confidence 4567885 999 99999999999999999999999976 79999754 78999999998844
No 42
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=83.42 E-value=1.8 Score=28.74 Aligned_cols=48 Identities=8% Similarity=0.121 Sum_probs=36.6
Q ss_pred hHHHHHHHHcCCCCeeEEEe-----cCCCC-CcEEEEEE-ccHHHHHHHHHhccC
Q 047835 17 CRTKAFKIIAGFPGLLSVAM-----KGDDL-RHMEVIGD-IDEVALANMLRRKIG 64 (101)
Q Consensus 17 C~~Kv~k~l~~~~GV~sV~i-----d~~~k-~kvtV~G~-vDp~~l~~~LrKk~~ 64 (101)
---.+-+.|++++||+.|.+ |.+.. =++|+.|+ +|-..+.+.+.+.++
T Consensus 20 ~ivdlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE~~Gg 74 (100)
T 3bpd_A 20 KTIVFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDMGG 74 (100)
T ss_dssp CHHHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTTC
T ss_pred CHHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCC
Confidence 34456678899999998765 33221 27889999 999999999998665
No 43
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=80.83 E-value=1.8 Score=28.68 Aligned_cols=60 Identities=13% Similarity=0.211 Sum_probs=40.7
Q ss_pred eEEEEEeCCChHhhHHHHHHHHcCCCCeeEEEe-----cCCCC-CcEEEEEE-ccHHHHHHHHHhccC
Q 047835 4 KILYRLDNMHSPKCRTKAFKIIAGFPGLLSVAM-----KGDDL-RHMEVIGD-IDEVALANMLRRKIG 64 (101)
Q Consensus 4 ~vvlKV~m~C~e~C~~Kv~k~l~~~~GV~sV~i-----d~~~k-~kvtV~G~-vDp~~l~~~LrKk~~ 64 (101)
.+||-|.=.. +----.+-+.|++++||+.|.+ |.+.. =++|+.|+ +|-..+.+.|.+.++
T Consensus 8 RlVLDVlKPh-~p~i~d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE~~Gg 74 (97)
T 2raq_A 8 RIVLDILKPH-EPIIPEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYGG 74 (97)
T ss_dssp EEEEEEECCS-CSCHHHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHTTC
T ss_pred EEEEEecCCC-CCCHHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCC
Confidence 3444443222 3334456678889999887765 33221 27889999 999999999999665
No 44
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=78.63 E-value=2.7 Score=27.73 Aligned_cols=47 Identities=13% Similarity=0.151 Sum_probs=36.0
Q ss_pred HHHHHHHHcCCCCeeEEEe-----cCCCC-CcEEEEEE-ccHHHHHHHHHhccC
Q 047835 18 RTKAFKIIAGFPGLLSVAM-----KGDDL-RHMEVIGD-IDEVALANMLRRKIG 64 (101)
Q Consensus 18 ~~Kv~k~l~~~~GV~sV~i-----d~~~k-~kvtV~G~-vDp~~l~~~LrKk~~ 64 (101)
--.+-+.|++++||+.|.+ |.+.. =++|+.|+ +|-..+.+.+.+.++
T Consensus 20 ivd~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE~~Gg 73 (96)
T 2x3d_A 20 IVDLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLEEEGC 73 (96)
T ss_dssp HHHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCC
Confidence 3456678899999998765 33221 27889999 999999999998665
No 45
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=73.96 E-value=7.1 Score=25.04 Aligned_cols=17 Identities=18% Similarity=0.258 Sum_probs=10.0
Q ss_pred hhHHHHHHHHcCCCCee
Q 047835 16 KCRTKAFKIIAGFPGLL 32 (101)
Q Consensus 16 ~C~~Kv~k~l~~~~GV~ 32 (101)
+=...+...|..++||+
T Consensus 17 ~~~~~V~~~L~~ipgvE 33 (95)
T 2jsx_A 17 ERISDISTQLNAFPGCE 33 (95)
T ss_dssp TSHHHHHHHHTTSTTEE
T ss_pred CCHHHHHHHHHCCCCeE
Confidence 34555666666666664
No 46
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=71.28 E-value=17 Score=23.16 Aligned_cols=27 Identities=7% Similarity=0.123 Sum_probs=12.9
Q ss_pred HHHHcCCCCeeEEEe---cCCCCCcEEEEEE
Q 047835 22 FKIIAGFPGLLSVAM---KGDDLRHMEVIGD 49 (101)
Q Consensus 22 ~k~l~~~~GV~sV~i---d~~~k~kvtV~G~ 49 (101)
......+..+..+++ |... +++.|+=+
T Consensus 20 ~~V~~~L~~ipgvEi~~~~~~~-GkiVV~iE 49 (95)
T 2jsx_A 20 SDISTQLNAFPGCEVAVSDAPS-GQLIVVVE 49 (95)
T ss_dssp HHHHHHHTTSTTEEEEEEETTT-TEEEEEEE
T ss_pred HHHHHHHHCCCCeEEEEecCCC-CCEEEEEE
Confidence 344455555555555 2222 55555444
No 47
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=70.91 E-value=4.9 Score=25.51 Aligned_cols=34 Identities=18% Similarity=0.390 Sum_probs=27.8
Q ss_pred eEEEEEeCCChHhh------HHHHHHHHcCCCCeeEEEecC
Q 047835 4 KILYRLDNMHSPKC------RTKAFKIIAGFPGLLSVAMKG 38 (101)
Q Consensus 4 ~vvlKV~m~C~e~C------~~Kv~k~l~~~~GV~sV~id~ 38 (101)
.+.+.+.+.+ .+| ...+..+|..++||.+++++.
T Consensus 42 ~V~v~l~lt~-~~cp~~~~l~~~i~~al~~l~gv~~V~V~l 81 (103)
T 3cq1_A 42 RAYVRMTLTT-PGCPLHDSLGEAVRQALSRLPGVEEVEVEV 81 (103)
T ss_dssp EEEEEECCSS-SSCCSSCHHHHHHHHHHHTSTTCCEEEEEE
T ss_pred EEEEEEEECC-CCCcHHHHHHHHHHHHHHhCCCceeEEEEE
Confidence 4667777777 777 678899999999999998865
No 48
>2cpq_A FragIle X mental retardation syndrome related protein 1, isoform B'; KH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=69.25 E-value=11 Score=24.26 Aligned_cols=35 Identities=14% Similarity=0.304 Sum_probs=26.0
Q ss_pred HHHHHHHcCCCCeeEEEecCCCCCcEEEEEEccHHHH
Q 047835 19 TKAFKIIAGFPGLLSVAMKGDDLRHMEVIGDIDEVAL 55 (101)
Q Consensus 19 ~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~vDp~~l 55 (101)
.+..+.+....|+.+|+++..+ ++|++.| .|...+
T Consensus 34 Gk~Ik~I~e~tGv~~IdI~edd-G~V~I~g-~~~ea~ 68 (91)
T 2cpq_A 34 GSNIQQARKVPGVTAIELDEDT-GTFRIYG-ESADAV 68 (91)
T ss_dssp THHHHHHHTSTTEEEEEEETTT-TEEEEEE-SSHHHH
T ss_pred cHHHHHHHHHhCCeEEEEEcCC-CEEEEEE-CCHHHH
Confidence 4566777788999889998655 8999999 344433
No 49
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=65.66 E-value=7.1 Score=24.65 Aligned_cols=34 Identities=18% Similarity=0.254 Sum_probs=27.3
Q ss_pred eEEEEEeCCChHhh------HHHHHHHHcCCCCeeEEEecC
Q 047835 4 KILYRLDNMHSPKC------RTKAFKIIAGFPGLLSVAMKG 38 (101)
Q Consensus 4 ~vvlKV~m~C~e~C------~~Kv~k~l~~~~GV~sV~id~ 38 (101)
.+.+.+.+.. .+| ...+..+|..++||.+++++.
T Consensus 43 ~V~v~l~lt~-~~cp~~~~l~~~i~~al~~l~gv~~v~V~l 82 (103)
T 1uwd_A 43 NVKVLMTMTT-PMCPLAGMILSDAEEAIKKIEGVNNVEVEL 82 (103)
T ss_dssp EEEEEECCSS-SCCSSHHHHHHHHHHHHHTSSSCCEEEEEE
T ss_pred EEEEEEEECC-CCCcHHHHHHHHHHHHHHhCCCcceEEEEE
Confidence 4667777777 777 677889999999999988865
No 50
>1dtj_A RNA-binding neurooncological ventral antigen 2; KH domain, alpha-beta fold RNA-binding motif, immune system; 2.00A {Homo sapiens} SCOP: d.51.1.1 PDB: 1dt4_A
Probab=52.93 E-value=25 Score=20.51 Aligned_cols=52 Identities=10% Similarity=0.130 Sum_probs=35.4
Q ss_pred CcceEEEEEeCCChHhhH----HHHHHHHcCCCCeeEEEecCCC-------CCcEEEEEEccHHH
Q 047835 1 MRKKILYRLDNMHSPKCR----TKAFKIIAGFPGLLSVAMKGDD-------LRHMEVIGDIDEVA 54 (101)
Q Consensus 1 M~q~vvlKV~m~C~e~C~----~Kv~k~l~~~~GV~sV~id~~~-------k~kvtV~G~vDp~~ 54 (101)
|+.++.|.|.-+. -|+- .+..+.|....|+ .|.++... .+.|++.|..+...
T Consensus 1 ~~~~~~i~Ip~~~-vg~IIGkgG~~Ik~I~~~tga-~I~i~~~~~~~~~~~~~~v~I~G~~~~v~ 63 (76)
T 1dtj_A 1 MKELVEMAVPENL-VGAILGKGGKTLVEYQELTGA-RIQISKKGEFLPGTRNRRVTITGSPAATQ 63 (76)
T ss_dssp CCEEEEEEEETTT-HHHHHCSTTHHHHHHHHHHCC-EEEECCTTCCSTTCCEEEEEEEESHHHHH
T ss_pred CceEEEEEEChHH-cceEECCCchHHHHHHHHhCC-EEEECcCCCCCCCCceeEEEEEeCHHHHH
Confidence 6777888888777 6663 5566667777887 47777531 14899999844333
No 51
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=52.03 E-value=11 Score=24.23 Aligned_cols=34 Identities=9% Similarity=0.232 Sum_probs=27.3
Q ss_pred eEEEEEeCCChHhh------HHHHHHHH-cCCCCeeEEEecC
Q 047835 4 KILYRLDNMHSPKC------RTKAFKII-AGFPGLLSVAMKG 38 (101)
Q Consensus 4 ~vvlKV~m~C~e~C------~~Kv~k~l-~~~~GV~sV~id~ 38 (101)
.|.+.+.+.. .+| ...+..+| ..++||.+|.+..
T Consensus 45 ~V~V~ltlt~-p~cp~~~~i~~~i~~al~~~l~Gv~~V~V~l 85 (108)
T 3lno_A 45 NAVITMTMTS-IGCPMAGQIVSDVKKVLSTNVPEVNEIEVNV 85 (108)
T ss_dssp CEEEEECCSC-TTCTTHHHHHHHHHHHHHHHCTTCCCEEEEE
T ss_pred eEEEEEEECC-CCCcHHHHHHHHHHHHHHHhCCCCceEEEEE
Confidence 4677777777 777 67788888 8999999988865
No 52
>1vbk_A Hypothetical protein PH1313; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Pyrococcus horikoshii} SCOP: c.26.2.6 d.308.1.1
Probab=48.29 E-value=39 Score=25.33 Aligned_cols=46 Identities=15% Similarity=0.130 Sum_probs=34.7
Q ss_pred hHHHHHHHHcCCCCee--EEEecCCCCCcEEEEEEccHHHHHHHHHhccCceE
Q 047835 17 CRTKAFKIIAGFPGLL--SVAMKGDDLRHMEVIGDIDEVALANMLRRKIGYVE 67 (101)
Q Consensus 17 C~~Kv~k~l~~~~GV~--sV~id~~~k~kvtV~G~vDp~~l~~~LrKk~~~ae 67 (101)
..+.++++|.. +++. ++.-.. |++.|.|+ |+..++++|++.+|-+.
T Consensus 26 L~~nI~~~L~~-~~~~~~~v~~~~---gri~V~~~-~~~~~~~~L~~vfGI~~ 73 (307)
T 1vbk_A 26 LMNNIREALVT-EEVPYKEIFSRH---GRIIVKTN-SPKEAANVLVRVFGIVS 73 (307)
T ss_dssp HHHHHHHHHHH-TTCCCSEEEEET---TEEEEECS-CHHHHHHHHTTSTTEEE
T ss_pred HHHHHHHHhcc-cCccceeEEEEC---CEEEEEcC-CHHHHHHHHhhcCCeEE
Confidence 56778888887 7776 366543 79999876 89999999998766433
No 53
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=47.04 E-value=40 Score=19.42 Aligned_cols=31 Identities=10% Similarity=0.021 Sum_probs=19.5
Q ss_pred EEEEEeCCChHhhHHHHHHHHcCCCCeeEEEe
Q 047835 5 ILYRLDNMHSPKCRTKAFKIIAGFPGLLSVAM 36 (101)
Q Consensus 5 vvlKV~m~C~e~C~~Kv~k~l~~~~GV~sV~i 36 (101)
+++.++... ..--..+++.|.+++||.++..
T Consensus 47 ~~i~v~~~~-~~~l~~l~~~L~~~~~V~~v~~ 77 (88)
T 2ko1_A 47 CNLMIFVKN-TDKLTTLMDKLRKVQGVFTVER 77 (88)
T ss_dssp EEEEEEESS-HHHHHHHHHHHTTCTTEEEEEE
T ss_pred EEEEEEECC-HHHHHHHHHHHhcCCCceEEEE
Confidence 444555554 5555677777777777776654
No 54
>3ami_A Zinc peptidase; alpha/beta, zinc binding, hydrolase; 2.40A {Sphingomonas} PDB: 3amj_C
Probab=43.48 E-value=15 Score=27.62 Aligned_cols=23 Identities=22% Similarity=0.473 Sum_probs=20.2
Q ss_pred CcEEEEEEccHHHHHHHHHhccC
Q 047835 42 RHMEVIGDIDEVALANMLRRKIG 64 (101)
Q Consensus 42 ~kvtV~G~vDp~~l~~~LrKk~~ 64 (101)
-.+.|+|++|+.++...+++.++
T Consensus 190 ~~l~vvGd~d~~~~~~~v~~~f~ 212 (445)
T 3ami_A 190 ATVVVVGDVEHEAVFRLAEQTYG 212 (445)
T ss_dssp EEEEEEESCCHHHHHHHHHHTGG
T ss_pred eEEEEEcCCCHHHHHHHHHHHhc
Confidence 47889999999999999988665
No 55
>2k1h_A Uncharacterized protein Ser13; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Staphylococcus epidermidis}
Probab=41.81 E-value=55 Score=20.90 Aligned_cols=38 Identities=8% Similarity=0.027 Sum_probs=28.3
Q ss_pred HHHHHcCCCCeeEEEecCCCCCcEEEEEE--ccHHHHHHHHHh
Q 047835 21 AFKIIAGFPGLLSVAMKGDDLRHMEVIGD--IDEVALANMLRR 61 (101)
Q Consensus 21 v~k~l~~~~GV~sV~id~~~k~kvtV~G~--vDp~~l~~~LrK 61 (101)
.-+.|=.++||++|-+.. |=+||+-. +|=..|...++.
T Consensus 41 LA~~LF~i~gVk~Vf~g~---dFITVtK~~~~dW~~ikp~I~~ 80 (94)
T 2k1h_A 41 FINRLFEIEGVKSIFYVL---DFISIDKEDNANWNELLPQIEN 80 (94)
T ss_dssp HHHHHHTSTTEEEEEEET---TEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHhhCCCCeeEEEEeC---CEEEEecCCCCCHHHHHHHHHH
Confidence 344555899999999975 79999886 676776666553
No 56
>2yy3_A Elongation factor 1-beta; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 2.50A {Pyrococcus horikoshii}
Probab=39.98 E-value=33 Score=21.91 Aligned_cols=35 Identities=3% Similarity=-0.023 Sum_probs=25.2
Q ss_pred eEEEEEeCCChHh-hHHHHHHHHcCCCCeeEEEecC
Q 047835 4 KILYRLDNMHSPK-CRTKAFKIIAGFPGLLSVAMKG 38 (101)
Q Consensus 4 ~vvlKV~m~C~e~-C~~Kv~k~l~~~~GV~sV~id~ 38 (101)
+..+.+-+...++ --..+...++.++||+|+++..
T Consensus 52 ~L~i~~vveD~~~~~tD~lee~i~~~e~VqSvdV~~ 87 (91)
T 2yy3_A 52 ALKFYVLGRDEEGYSFDEVAEKFEEVENVESAEVET 87 (91)
T ss_dssp EEEEEEEECSSTTCCHHHHHHHHHHSTTEEEEEEEE
T ss_pred eEEEEEEEECCCccccHHHHHHHhcCCCceEEEEEE
Confidence 3444555555134 5888999999999999999854
No 57
>3go9_A Insulinase family protease; IDP00573, structural genomics, for structural genomics of infectious diseases, csgid, HYDR; HET: MSE; 1.62A {Yersinia pestis}
Probab=38.59 E-value=31 Score=26.78 Aligned_cols=23 Identities=17% Similarity=0.446 Sum_probs=19.8
Q ss_pred CcEEEEEEccHHHHHHHHHhccC
Q 047835 42 RHMEVIGDIDEVALANMLRRKIG 64 (101)
Q Consensus 42 ~kvtV~G~vDp~~l~~~LrKk~~ 64 (101)
-.|.|+|++|+.++...+.+.++
T Consensus 212 ~~l~vvGdvd~~~~~~~i~~~f~ 234 (492)
T 3go9_A 212 MTLYVVGNVDSRSIAAQISKAFS 234 (492)
T ss_dssp EEEEEEESCCHHHHHHHHHHHHT
T ss_pred eEEEEEcCCCHHHHHHHHHHHhh
Confidence 36888999999999999988665
No 58
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=38.26 E-value=50 Score=21.82 Aligned_cols=32 Identities=9% Similarity=0.242 Sum_probs=20.7
Q ss_pred HHHHHHHcCCCCeeEEEecCCCCCcEEEEEEccHHH
Q 047835 19 TKAFKIIAGFPGLLSVAMKGDDLRHMEVIGDIDEVA 54 (101)
Q Consensus 19 ~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~vDp~~ 54 (101)
..+++.+..++.+ .|+++. +.||++|.++-..
T Consensus 67 ~~aL~~~~~l~~i-~V~V~~---g~VtLsG~v~s~~ 98 (132)
T 2kgs_A 67 EPVFTASVPIPDF-GLKVER---DTVTLTGTAPSSE 98 (132)
T ss_dssp HHHHHHHTTCTTC-EEEEEE---TEEEEECEESSHH
T ss_pred HHHHHhcCcCCce-EEEEEC---CEEEEEEEECCHH
Confidence 4556666666533 355543 7999999986553
No 59
>2g2k_A EIF-5, eukaryotic translation initiation factor 5; EIF125 fold; NMR {Homo sapiens}
Probab=36.53 E-value=32 Score=24.49 Aligned_cols=28 Identities=21% Similarity=0.216 Sum_probs=22.7
Q ss_pred EecCCCCCcEEEEEEccHHHHHHHHHhcc
Q 047835 35 AMKGDDLRHMEVIGDIDEVALANMLRRKI 63 (101)
Q Consensus 35 ~id~~~k~kvtV~G~vDp~~l~~~LrKk~ 63 (101)
.+|.++ ++++|.|.+++.+|-+.|++..
T Consensus 66 ~id~~~-~rliinG~~~~~~i~~~L~~yI 93 (170)
T 2g2k_A 66 QFDVKN-DRYIVNGSHEANKLQDMLDGFI 93 (170)
T ss_dssp EECTTT-CCEEEEBCCCHHHHHHHHHHHH
T ss_pred eecCCC-CEEEEEeeeCHHHHHHHHHHHH
Confidence 567655 8999999999999988887643
No 60
>3amj_B Zinc peptidase inactive subunit; alpha/beta, zinc binding, hydrolase; 3.00A {Sphingomonas}
Probab=34.03 E-value=28 Score=25.58 Aligned_cols=24 Identities=13% Similarity=0.254 Sum_probs=20.5
Q ss_pred CcEEEEEEccHHHHHHHHHhccCc
Q 047835 42 RHMEVIGDIDEVALANMLRRKIGY 65 (101)
Q Consensus 42 ~kvtV~G~vDp~~l~~~LrKk~~~ 65 (101)
-.+.|+|++|+.++...+.+.++.
T Consensus 190 ~~l~v~Gd~~~~~~~~~~~~~f~~ 213 (424)
T 3amj_B 190 AVVTLVGDITRAEAETIAQQLTAD 213 (424)
T ss_dssp CEEEEEESCCHHHHHHHHHHTTTT
T ss_pred eEEEEEeCCCHHHHHHHHHHHHhc
Confidence 478999999999999999886653
No 61
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=33.71 E-value=26 Score=23.59 Aligned_cols=31 Identities=23% Similarity=0.199 Sum_probs=26.2
Q ss_pred CcEEEEEEccHHHHHHHHHhc-cCceEEEecC
Q 047835 42 RHMEVIGDIDEVALANMLRRK-IGYVETMKLD 72 (101)
Q Consensus 42 ~kvtV~G~vDp~~l~~~LrKk-~~~aeivsv~ 72 (101)
.=+.|+|+-|=.-++++||.+ +..+.+++..
T Consensus 111 ~~vLvSgD~DF~plv~~lr~~~G~~V~v~g~~ 142 (165)
T 2qip_A 111 RVILVSGDGDFSLLVERIQQRYNKKVTVYGVP 142 (165)
T ss_dssp EEEEECCCGGGHHHHHHHHHHHCCEEEEEECG
T ss_pred EEEEEECChhHHHHHHHHHHHcCcEEEEEeCC
Confidence 357789999999999999997 7788888863
No 62
>3eoq_A Putative zinc protease; two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)- beta structure, hydrolase; 2.29A {Thermus thermophilus}
Probab=33.66 E-value=22 Score=26.23 Aligned_cols=23 Identities=17% Similarity=0.092 Sum_probs=19.8
Q ss_pred CcEEEEEEccHHHHHHHHHhccC
Q 047835 42 RHMEVIGDIDEVALANMLRRKIG 64 (101)
Q Consensus 42 ~kvtV~G~vDp~~l~~~LrKk~~ 64 (101)
-.+.|+|++|+.++.+.+.+.++
T Consensus 183 ~~l~v~Gd~~~~~~~~~i~~~f~ 205 (406)
T 3eoq_A 183 MVLAATGRVDFDRLLAEAERLTE 205 (406)
T ss_dssp EEEEEEESCCHHHHHHHHHHHHT
T ss_pred EEEEEEcCCCHHHHHHHHHHHhc
Confidence 47888999999999999988664
No 63
>3g74_A Protein of unknown function; APC21008.1, structural GE PSI-2, protein structure initiative, midwest center for STR genomics; 2.43A {Eubacterium ventriosum atcc 27560}
Probab=33.15 E-value=39 Score=21.75 Aligned_cols=26 Identities=8% Similarity=0.193 Sum_probs=23.9
Q ss_pred ccHHHHHHHHHhccCceEEEecCCCC
Q 047835 50 IDEVALANMLRRKIGYVETMKLDILD 75 (101)
Q Consensus 50 vDp~~l~~~LrKk~~~aeivsv~p~k 75 (101)
+|..++++.+++.+++++|-.+|+..
T Consensus 60 isvm~II~~I~~~~P~l~I~~iGe~~ 85 (100)
T 3g74_A 60 VSIMKIIEMADQTFQNVDIQNIGETE 85 (100)
T ss_dssp EEHHHHHHHHHHHCSSEEEEECSCSE
T ss_pred EEHHHHHHHHHHHCCCceEEEcCCCc
Confidence 68999999999999999999999874
No 64
>2e9h_A EIF-5, eukaryotic translation initiation factor 5; zinc binding, C4 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.87 E-value=37 Score=23.84 Aligned_cols=28 Identities=21% Similarity=0.216 Sum_probs=22.6
Q ss_pred EecCCCCCcEEEEEEccHHHHHHHHHhcc
Q 047835 35 AMKGDDLRHMEVIGDIDEVALANMLRRKI 63 (101)
Q Consensus 35 ~id~~~k~kvtV~G~vDp~~l~~~LrKk~ 63 (101)
.+|.++ ++++|.|.+++.+|-+.|++..
T Consensus 73 ~id~~~-~rlii~G~~~~~~i~~~L~~yI 100 (157)
T 2e9h_A 73 QFDVKN-DRYIVNGSHEANKLQDMLDGFI 100 (157)
T ss_dssp EEETTT-TEEEEEBCCCHHHHHHHHHHHH
T ss_pred eecCCC-CEEEEEeeeCHHHHHHHHHHHH
Confidence 466444 8999999999999998887643
No 65
>1hr6_B Beta-MPP, mitochondrial processing peptidase beta subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_B 1hr8_B* 1hr9_B*
Probab=31.42 E-value=25 Score=26.05 Aligned_cols=23 Identities=17% Similarity=0.296 Sum_probs=19.4
Q ss_pred CcEEEEEEccHHHHHHHHHhccC
Q 047835 42 RHMEVIGDIDEVALANMLRRKIG 64 (101)
Q Consensus 42 ~kvtV~G~vDp~~l~~~LrKk~~ 64 (101)
-.+.|+|++|+.++...+.+.++
T Consensus 189 ~~l~v~Gd~~~~~~~~~i~~~f~ 211 (443)
T 1hr6_B 189 MVLAGAGAVDHEKLVQYAQKYFG 211 (443)
T ss_dssp EEEEEEESCCHHHHHHHHHHHHT
T ss_pred EEEEEEcCCCHHHHHHHHHHHhc
Confidence 36788999999999999987664
No 66
>1gh8_A Translation elongation factor 1BETA; alpha-beta sandwich, gene regulation, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: d.58.12.1
Probab=31.39 E-value=58 Score=20.61 Aligned_cols=34 Identities=9% Similarity=0.085 Sum_probs=24.4
Q ss_pred EEEEEeCCChHhhHHHHHHHHcCCCCeeEEEecC
Q 047835 5 ILYRLDNMHSPKCRTKAFKIIAGFPGLLSVAMKG 38 (101)
Q Consensus 5 vvlKV~m~C~e~C~~Kv~k~l~~~~GV~sV~id~ 38 (101)
..+.+-+...++--..+...++.++||+|+++..
T Consensus 51 L~i~~vveD~~~~td~lee~i~~~e~Vqsvdv~~ 84 (89)
T 1gh8_A 51 LNVMVVVGDAEGGTEAAEESLSGIEGVSNIEVTD 84 (89)
T ss_dssp EEEEEEESSSCGGGGHHHHHHTTSCSSEEEEEEE
T ss_pred EEEEEEEEcCCcChHHHHHHHhccCCccEEEEEE
Confidence 3344444332566778889999999999999864
No 67
>2h1z_A Hybrid atracotoxin; beta-hairpin, cystine knot; NMR {Hadronyche versuta}
Probab=30.45 E-value=20 Score=19.79 Aligned_cols=12 Identities=33% Similarity=0.694 Sum_probs=9.8
Q ss_pred CCCCCCCCCccc
Q 047835 88 QQPFPAETPCCS 99 (101)
Q Consensus 88 ~~~~~~~~p~~~ 99 (101)
||+.+...||||
T Consensus 8 QPCpyN~~pCCs 19 (39)
T 2h1z_A 8 QPCSLNTQPCCD 19 (39)
T ss_dssp SBCCTTSCCBST
T ss_pred CCCCCCcccccC
Confidence 567778889998
No 68
>2ctf_A Vigilin; K homology type I domain, RNA-binding, cell sterol metabolism, beta-alpha-alpha-beta-BETA-alpha structure, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=30.24 E-value=90 Score=19.69 Aligned_cols=38 Identities=13% Similarity=0.242 Sum_probs=23.6
Q ss_pred HHHHHHcCCCCeeEEEecCCCCCcEEEEEE-ccHHHHHHHH
Q 047835 20 KAFKIIAGFPGLLSVAMKGDDLRHMEVIGD-IDEVALANML 59 (101)
Q Consensus 20 Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~-vDp~~l~~~L 59 (101)
.++++...+.|| .|.+...+ +.||+.|. -+..+....|
T Consensus 48 ~Ik~i~~~~~~v-~I~fp~~~-~~ItI~G~~~~V~~a~~~I 86 (102)
T 2ctf_A 48 NLAKITQQMPKV-HIEFTEGE-DKITLEGPTEDVSVAQEQI 86 (102)
T ss_dssp HHHHHHHHCSSS-EEEECSSS-CEEEEEECHHHHHHHHHHH
T ss_pred cHHHHHHHcCCc-EEEeCCCC-CEEEEECCHHHHHHHHHHH
Confidence 455555556676 57776655 79999999 3333333333
No 69
>1b64_A Elongation factor 1-beta; guanine nucleotide exchange factor, G-protein, translation elongation; NMR {Homo sapiens} SCOP: d.58.12.1
Probab=28.87 E-value=1e+02 Score=19.48 Aligned_cols=35 Identities=9% Similarity=-0.049 Sum_probs=25.1
Q ss_pred EEEEeCCChHhhHHHHHHHHcCCCC-eeEEEecCCC
Q 047835 6 LYRLDNMHSPKCRTKAFKIIAGFPG-LLSVAMKGDD 40 (101)
Q Consensus 6 vlKV~m~C~e~C~~Kv~k~l~~~~G-V~sV~id~~~ 40 (101)
-+.+-+...++--..+...++.++| |+|+++...+
T Consensus 54 ~i~~vveDd~v~tD~lee~i~~~ed~VqSvdI~~~~ 89 (91)
T 1b64_A 54 QIQCVVEDDKVGTDMLEEQITAFEDYVQSMDVAAFN 89 (91)
T ss_dssp EEEEEECTTSSCHHHHHHHHTTCTTTEEEEEESCCB
T ss_pred EEEEEEECCccChHHHHHHHHhccCceeEEEEEEEE
Confidence 3344444424567788899999999 9999997653
No 70
>1pp9_A Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_A* 1be3_A* 1l0n_A* 1ntk_A* 1ntm_A* 1ntz_A* 1nu1_A* 1l0l_A* 1ppj_A* 1sqq_A* 1sqv_A* 1sqx_A* 2a06_A* 2fyu_A* 2ybb_A* 1sqb_A* 1sqp_A* 1qcr_A* 1bcc_A* 2bcc_A* ...
Probab=28.57 E-value=30 Score=25.85 Aligned_cols=23 Identities=9% Similarity=0.315 Sum_probs=19.3
Q ss_pred CcEEEEEEccHHHHHHHHHhccC
Q 047835 42 RHMEVIGDIDEVALANMLRRKIG 64 (101)
Q Consensus 42 ~kvtV~G~vDp~~l~~~LrKk~~ 64 (101)
-.+.|+|++|+.++.+.+.+.++
T Consensus 195 ~~l~v~Gd~~~~~~~~~i~~~f~ 217 (446)
T 1pp9_A 195 MVLAAAGGLEHRQLLDLAQKHFS 217 (446)
T ss_dssp EEEEEEESCCHHHHHHHHHHHHT
T ss_pred EEEEEEcCCCHHHHHHHHHHHhc
Confidence 36788999999999999987664
No 71
>1n0u_A EF-2, elongation factor 2; G-protein, CIS-proline, translation; HET: SO1; 2.12A {Saccharomyces cerevisiae} SCOP: b.43.3.1 c.37.1.8 d.14.1.1 d.58.11.1 d.58.11.1 PDB: 1n0v_C 1s1h_T 2e1r_A* 2npf_A* 2p8w_T* 3dny_T 3b82_A* 1zm2_A* 1zm3_A* 1zm4_A* 1zm9_A* 2p8x_T* 2p8y_T* 2p8z_T* 2zit_A* 1u2r_A* 3b78_A* 3b8h_A*
Probab=28.52 E-value=88 Score=26.70 Aligned_cols=61 Identities=10% Similarity=0.180 Sum_probs=44.4
Q ss_pred EEEEeCCChHhhHHHHHHHHcCCCC-eeEEEecCCCCCcEEEEEEc---cHHHHHHHHHhcc-CceE
Q 047835 6 LYRLDNMHSPKCRTKAFKIIAGFPG-LLSVAMKGDDLRHMEVIGDI---DEVALANMLRRKI-GYVE 67 (101)
Q Consensus 6 vlKV~m~C~e~C~~Kv~k~l~~~~G-V~sV~id~~~k~kvtV~G~v---Dp~~l~~~LrKk~-~~ae 67 (101)
+++|.+.|.+.+-..|+..|++.+| |.+.+..... +..+|.|.+ +-......||..+ |.+.
T Consensus 728 i~~veI~vP~e~~G~V~~dL~~RRG~i~~~~~~~g~-~~~~I~a~vP~aE~fgy~~~LRs~T~G~g~ 793 (842)
T 1n0u_A 728 VFLVEIQCPEQAVGGIYSVLNKKRGQVVSEEQRPGT-PLFTVKAYLPVNESFGFTGELRQATGGQAF 793 (842)
T ss_dssp EEEEEEEECGGGHHHHHHHHHTTTCEEEEEEC---C-CCEEEEEEEEGGGCTTHHHHHHHHTTTCCE
T ss_pred EEEEEEEccHHHHHHHHHHHHhcCcEEeccccCCCC-ceEEEEEEcChHHhhhhHHHHHhhCCCCce
Confidence 5677777878899999999999999 3354443322 468999994 6677888898877 4553
No 72
>4dok_A Similarity to chalcone-flavonone isomerase; chalcone-isomerase like protein, chalcone-isomerase like FOL isomerase; 1.70A {Arabidopsis thaliana}
Probab=27.78 E-value=42 Score=24.17 Aligned_cols=33 Identities=15% Similarity=0.227 Sum_probs=26.8
Q ss_pred CeeEEEecCCCCCcEEEEEE-ccHHHHHHHHHhccC
Q 047835 30 GLLSVAMKGDDLRHMEVIGD-IDEVALANMLRRKIG 64 (101)
Q Consensus 30 GV~sV~id~~~k~kvtV~G~-vDp~~l~~~LrKk~~ 64 (101)
||++.+|.... =++++.|- +|+..+...|. +|+
T Consensus 28 GvR~~~I~~~~-iKvYa~GlYl~~~~~~~~l~-kwk 61 (208)
T 4dok_A 28 GITDIEIHFLQ-VKFTAIGVYLDPSDVKTHLD-NWK 61 (208)
T ss_dssp EEEEEEETTEE-EEEEEEEEEECHHHHHHHCG-GGT
T ss_pred eeeeEeeeeeE-EEEEEEEEEecHHHHHHHHh-hhc
Confidence 78999887654 58899999 99999999994 463
No 73
>3d3y_A Uncharacterized protein; APC29635, conserved protein, enterococcus faecalis V583, STR genomics, PSI-2, protein structure initiative; 1.95A {Enterococcus faecalis}
Probab=25.69 E-value=45 Score=24.23 Aligned_cols=22 Identities=23% Similarity=0.560 Sum_probs=18.6
Q ss_pred CcEEEEEEccHHHHHHHHHhccC
Q 047835 42 RHMEVIGDIDEVALANMLRRKIG 64 (101)
Q Consensus 42 ~kvtV~G~vDp~~l~~~LrKk~~ 64 (101)
-.+.|+|++|+.++...+ +.++
T Consensus 201 ~~l~v~G~~~~~~~~~~~-~~~~ 222 (425)
T 3d3y_A 201 VDIFVLGDVNEAELVPLF-KQLP 222 (425)
T ss_dssp EEEEEEESCCHHHHHHHH-HTSC
T ss_pred eEEEEECCCCHHHHHHHH-HhCC
Confidence 378899999999999999 7554
No 74
>3hrg_A Uncharacterized protein BT_3980 with actin-like A fold; NP_812891.1, bacteroides thetaiotaomicron BT_3980; HET: MSE UNL; 1.85A {Bacteroides thetaiotaomicron vpi-5482}
Probab=25.69 E-value=80 Score=23.05 Aligned_cols=35 Identities=23% Similarity=0.339 Sum_probs=28.4
Q ss_pred EecCCCCCcEEEEEEc-cHHHHHHHHHhccCceEEEe
Q 047835 35 AMKGDDLRHMEVIGDI-DEVALANMLRRKIGYVETMK 70 (101)
Q Consensus 35 ~id~~~k~kvtV~G~v-Dp~~l~~~LrKk~~~aeivs 70 (101)
.+|.+. +.+.+.|++ +-..+...|++-.+++.++.
T Consensus 208 ~ld~e~-~~l~l~G~i~~~~~l~~~L~~Yi~~v~~~~ 243 (257)
T 3hrg_A 208 EFNQER-DELHLTGTLSDKETLMNELKKFILQVFIMN 243 (257)
T ss_dssp TCCTTT-CEEEEEECCTTHHHHHHHHHHHCSCEEECS
T ss_pred CCCccc-cEEEEEecCCCcHHHHHHHHHHHhhEEEeC
Confidence 356655 899999996 55678899999889999876
No 75
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=24.40 E-value=49 Score=19.92 Aligned_cols=24 Identities=17% Similarity=0.234 Sum_probs=17.2
Q ss_pred CCCCe--eEEEecCCCCCcEEEEEEcc
Q 047835 27 GFPGL--LSVAMKGDDLRHMEVIGDID 51 (101)
Q Consensus 27 ~~~GV--~sV~id~~~k~kvtV~G~vD 51 (101)
.++|+ +.|.+...+ +.|+|.|.-.
T Consensus 14 dlPG~~~edi~V~v~~-~~L~I~g~~~ 39 (85)
T 3q9p_A 14 DVNHFAPDELTVKTKD-GVVEITGKHA 39 (85)
T ss_dssp ECTTTCCSEEEEEEET-TEEEEEEEEC
T ss_pred ECCCCChHHEEEEEEC-CEEEEEEEEc
Confidence 45676 467776665 8999999843
No 76
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=24.18 E-value=89 Score=17.87 Aligned_cols=17 Identities=18% Similarity=0.339 Sum_probs=14.3
Q ss_pred HHHHcCCCCeeEEEecC
Q 047835 22 FKIIAGFPGLLSVAMKG 38 (101)
Q Consensus 22 ~k~l~~~~GV~sV~id~ 38 (101)
.+.|++.+||+.|+-|.
T Consensus 44 ~~~L~~~p~V~yVE~D~ 60 (65)
T 2z30_B 44 VGKLKKMPGVEKVEFDH 60 (65)
T ss_dssp HHHHHTSTTEEEEEECC
T ss_pred HHHHhcCCCceEEecCc
Confidence 45688999999999885
No 77
>1f60_B Elongation factor EEF1BA; protein-protein complex, translation; 1.67A {Saccharomyces cerevisiae} SCOP: d.58.12.1 PDB: 1g7c_B* 2b7c_B 2b7b_B 1ije_B* 1ijf_B*
Probab=23.84 E-value=1e+02 Score=19.66 Aligned_cols=32 Identities=6% Similarity=-0.133 Sum_probs=22.9
Q ss_pred EEEeCCChHhhHHHHHHHHcCCCC-eeEEEecC
Q 047835 7 YRLDNMHSPKCRTKAFKIIAGFPG-LLSVAMKG 38 (101)
Q Consensus 7 lKV~m~C~e~C~~Kv~k~l~~~~G-V~sV~id~ 38 (101)
+.+-+....+--..+...++.++| |+|+++..
T Consensus 58 i~~vveDd~~~tD~lee~i~~~ed~VqSvdI~~ 90 (94)
T 1f60_B 58 INCVVEDDKVSLDDLQQSIEEDEDHVQSTDIAA 90 (94)
T ss_dssp EEEEEETTTCCHHHHHHHHHTCTTTEEEEEEEE
T ss_pred EEEEEECCccChHHHHHHHHhccCceeEEEEEE
Confidence 333344324567788889999999 99999865
No 78
>1ec6_A RNA-binding protein NOVA-2; KH domain, alpha-beta fold, RNA-binding motif, protein/RNA structure, RNA binding protein/RNA complex; 2.40A {Homo sapiens} SCOP: d.51.1.1
Probab=22.66 E-value=79 Score=18.95 Aligned_cols=51 Identities=10% Similarity=0.139 Sum_probs=31.1
Q ss_pred CcceEEEEEeCCChHhh----HHHHHHHHcCCCCeeEEEecCCC-------CCcEEEEEEccHH
Q 047835 1 MRKKILYRLDNMHSPKC----RTKAFKIIAGFPGLLSVAMKGDD-------LRHMEVIGDIDEV 53 (101)
Q Consensus 1 M~q~vvlKV~m~C~e~C----~~Kv~k~l~~~~GV~sV~id~~~-------k~kvtV~G~vDp~ 53 (101)
|+.++.|.|.-+. -|+ ..+..+.|....|+ .|.++... .+.|++.|..+..
T Consensus 1 ~k~t~~i~IP~~~-vG~IIGkgG~~Ik~I~~~tga-~I~I~~~~~~~~g~~~r~v~I~G~~~~v 62 (87)
T 1ec6_A 1 MKELVEIAVPENL-VGAILGKGGKTLVEYQELTGA-RIQISKKGEFLPGTRNRRVTITGSPAAT 62 (87)
T ss_dssp CCSEEEEEEEHHH-HHHHHCGGGHHHHHHHHHHCC-EEEECCTTCBSTTSCEEEEEEESSHHHH
T ss_pred CceEEEEEEChHH-cCeeECCCcHhHHHHHHHhCC-EEEEccCCCCCCCCCceEEEEEcCHHHH
Confidence 5556666666554 443 24455666677787 47777531 1489999984433
No 79
>3pro_C Alpha-lytic protease; Pro region, foldase, protein folding, serine protease, hydro hydrolase inhibitor complex; HET: AES; 1.80A {Lysobacter enzymogenes} SCOP: d.52.1.1 d.52.1.1 PDB: 2pro_A* 4pro_C
Probab=22.16 E-value=35 Score=24.00 Aligned_cols=22 Identities=18% Similarity=0.101 Sum_probs=18.4
Q ss_pred CCCCeeEEEecCCCCCcEEEEEE
Q 047835 27 GFPGLLSVAMKGDDLRHMEVIGD 49 (101)
Q Consensus 27 ~~~GV~sV~id~~~k~kvtV~G~ 49 (101)
.-.||.+..+|... |+|+|.-+
T Consensus 112 ~~~~v~~W~VD~~t-N~VVV~a~ 133 (166)
T 3pro_C 112 PLDGVQSWYVDPRS-NAVVVKVD 133 (166)
T ss_dssp -CTTEEEEEEEGGG-TEEEEEEE
T ss_pred CCCCCceEEEeCCC-CeEEEEeC
Confidence 45678899999987 89999887
No 80
>1q2l_A Protease III; hydrolase; 2.20A {Escherichia coli str} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1
Probab=21.96 E-value=52 Score=27.31 Aligned_cols=23 Identities=17% Similarity=0.161 Sum_probs=20.5
Q ss_pred CcEEEEEEccHHHHHHHHHhccC
Q 047835 42 RHMEVIGDIDEVALANMLRRKIG 64 (101)
Q Consensus 42 ~kvtV~G~vDp~~l~~~LrKk~~ 64 (101)
-.|.|.|++|+.+|...+++.++
T Consensus 208 ~~l~v~G~~~~~~l~~~v~~~f~ 230 (939)
T 1q2l_A 208 MKAVIYSNKPLPELAKMAADTFG 230 (939)
T ss_dssp CEEEEEESSCHHHHHHHHHHTGG
T ss_pred eEEEEEcCCCHHHHHHHHHHHhh
Confidence 58999999999999999988765
No 81
>3cx5_A Cytochrome B-C1 complex subunit 1, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1p84_A* 2ibz_A* 1kb9_A* 3cxh_A* 1ezv_A* 1kyo_A*
Probab=21.79 E-value=52 Score=24.01 Aligned_cols=22 Identities=23% Similarity=0.223 Sum_probs=18.4
Q ss_pred CcEEEEEEccHHHHHHHHHhcc
Q 047835 42 RHMEVIGDIDEVALANMLRRKI 63 (101)
Q Consensus 42 ~kvtV~G~vDp~~l~~~LrKk~ 63 (101)
-.+.|+|++|+.++...+.+.+
T Consensus 180 ~~l~v~G~~~~~~~~~~~~~~~ 201 (431)
T 3cx5_A 180 AVVVGTGNIKHEDLVNSIESKN 201 (431)
T ss_dssp EEEEEEESCCHHHHHHHHTTSC
T ss_pred EEEEEEcCCCHHHHHHHHHHHh
Confidence 3788899999999999997733
No 82
>1pqx_A Conserved hypothetical protein; ZR18,structure, autostructure,spins,autoassign, northeast structural genomics consortium; NMR {Staphylococcus aureus subsp} SCOP: d.267.1.1 PDB: 2ffm_A
Probab=21.32 E-value=53 Score=20.87 Aligned_cols=37 Identities=11% Similarity=-0.001 Sum_probs=25.9
Q ss_pred HHHHHcCCCCeeEEEecCCCCCcEEEEEE--ccHHHHHHHHH
Q 047835 21 AFKIIAGFPGLLSVAMKGDDLRHMEVIGD--IDEVALANMLR 60 (101)
Q Consensus 21 v~k~l~~~~GV~sV~id~~~k~kvtV~G~--vDp~~l~~~Lr 60 (101)
.-+.|-.++||++|-+.. |=+||+-. +|=..|...++
T Consensus 41 LA~~LF~i~gVk~Vf~g~---dFITVtK~~~~dW~~ikp~V~ 79 (91)
T 1pqx_A 41 FINDILKVEGVKSIFHVM---DFISVDKENDANWETVLPKVE 79 (91)
T ss_dssp HHHHHHHSTTEEEEEEET---TEEEEEECTTSCSTTTHHHHH
T ss_pred HHHHhhCCCCeeEEEEeC---CEEEEecCCCCCHHHHHHHHH
Confidence 334455899999999975 79999875 55455544444
No 83
>2d74_B Translation initiation factor 2 beta subunit; protein complex; 2.80A {Pyrococcus furiosus} PDB: 2dcu_B*
Probab=21.25 E-value=46 Score=23.06 Aligned_cols=22 Identities=27% Similarity=0.430 Sum_probs=19.6
Q ss_pred CcEEEEEEccHHHHHHHHHhcc
Q 047835 42 RHMEVIGDIDEVALANMLRRKI 63 (101)
Q Consensus 42 ~kvtV~G~vDp~~l~~~LrKk~ 63 (101)
++++|.|.+++.+|-+.|++..
T Consensus 80 ~rlii~G~~~~~~i~~~L~~yI 101 (148)
T 2d74_B 80 RRVVLQGRFTPYLIANKLKKYI 101 (148)
T ss_dssp TEEEESSCCCHHHHHHHHHHHH
T ss_pred CEEEEEeeeCHHHHHHHHHHHH
Confidence 7999999999999999998744
No 84
>4fn5_A EF-G 1, elongation factor G 1; translation, translation-antibiotic compl; HET: 0UO; 2.90A {Pseudomonas aeruginosa}
Probab=21.15 E-value=1.3e+02 Score=24.95 Aligned_cols=60 Identities=8% Similarity=0.088 Sum_probs=45.0
Q ss_pred EEEEeCCChHhhHHHHHHHHcCCCCe-eEEEecCCCCCcEEEEEEc---cHHHHHHHHHhcc-CceEE
Q 047835 6 LYRLDNMHSPKCRTKAFKIIAGFPGL-LSVAMKGDDLRHMEVIGDI---DEVALANMLRRKI-GYVET 68 (101)
Q Consensus 6 vlKV~m~C~e~C~~Kv~k~l~~~~GV-~sV~id~~~k~kvtV~G~v---Dp~~l~~~LrKk~-~~aei 68 (101)
+++|.+.|.+.+-..++..|++.+|. .+.+. .. +..+|.|.+ +-......||..+ |.|..
T Consensus 622 i~~veI~~p~~~~G~V~~~L~~RRG~i~~~~~--~~-~~~~i~a~vPv~E~~gf~~~LRs~T~G~a~~ 686 (709)
T 4fn5_A 622 IMKVEVVTPEDYMGDVMGDLNRRRGLIQGMED--TV-SGKVIRAEVPLGEMFGYATDVRSMSQGRASY 686 (709)
T ss_dssp EEEEEEEEETTTHHHHHHHHGGGTCEEEEEEE--CS-SEEEEEEEEESGGGTTHHHHHHHHTTTCCEE
T ss_pred eEEEEEEECHHHHHHHHHHHHhcCCEEeceEe--cC-CCEEEEEEecHHHhhCHHHHHHhhCCCeEEE
Confidence 56777777788999999999999994 44443 33 566799993 7777888899877 46543
No 85
>4evu_A Putative periplasmic protein YDGH; structural genomics, PSI-biology, program for the characteri secreted effector proteins, pcsep; HET: MSE; 1.45A {Salmonella enterica subsp}
Probab=20.88 E-value=62 Score=19.86 Aligned_cols=22 Identities=5% Similarity=0.208 Sum_probs=17.0
Q ss_pred CcEEEEEE-ccHHHHHHHHHhcc
Q 047835 42 RHMEVIGD-IDEVALANMLRRKI 63 (101)
Q Consensus 42 ~kvtV~G~-vDp~~l~~~LrKk~ 63 (101)
|.|+|.|. -.|.++...|.|+-
T Consensus 21 gtVsvsg~~~sp~D~~~~lskkA 43 (72)
T 4evu_A 21 DSVKFTGNYGNMTEISYQVAKRA 43 (72)
T ss_dssp EEEEEEECCSSHHHHHHHHHHHH
T ss_pred cEEEECCccCChHHHHHHHHHHH
Confidence 68999998 58888777776544
No 86
>2cuy_A Malonyl COA-[acyl carrier protein] transacylase; transferase, structural genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=20.48 E-value=2.6e+02 Score=20.46 Aligned_cols=51 Identities=14% Similarity=0.159 Sum_probs=34.5
Q ss_pred HHHHHHHHcCCCCeeEEEecCCCCCcEEEEEEc-cHHHHHHHHHhccCceEEEe
Q 047835 18 RTKAFKIIAGFPGLLSVAMKGDDLRHMEVIGDI-DEVALANMLRRKIGYVETMK 70 (101)
Q Consensus 18 ~~Kv~k~l~~~~GV~sV~id~~~k~kvtV~G~v-Dp~~l~~~LrKk~~~aeivs 70 (101)
...+...+...+||.=..++.. +.++|.|+. +-..+...|+.....+..+.
T Consensus 137 ~~~v~~~l~~~~~v~iA~~Nsp--~~~visG~~~~l~~~~~~l~~~g~~~~~L~ 188 (305)
T 2cuy_A 137 LEEIQKALEGLEGVEIANLNAP--EQTVISGRRQAVEEAAERLKERRARVVFLP 188 (305)
T ss_dssp HHHHHHHHTTCSSEEEEEEEET--TEEEEEEEHHHHHHHHHHHHHTTCEEEECS
T ss_pred HHHHHHHHhhcCCeEEEEEecC--CcEEEEcCHHHHHHHHHHHHhCCceEEECC
Confidence 3456777777778665556663 699999995 55667888877554444443
No 87
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=20.45 E-value=41 Score=20.97 Aligned_cols=23 Identities=17% Similarity=0.166 Sum_probs=15.4
Q ss_pred CCCCee--EEEecCCCCCcEEEEEEc
Q 047835 27 GFPGLL--SVAMKGDDLRHMEVIGDI 50 (101)
Q Consensus 27 ~~~GV~--sV~id~~~k~kvtV~G~v 50 (101)
.++|+. .|.+...+ +.|+|.|.-
T Consensus 18 dlPG~~~edI~V~v~~-~~L~I~g~~ 42 (101)
T 2wj5_A 18 DVKHFSPEEISVKVVG-DHVEVHARH 42 (101)
T ss_dssp ECTTSCGGGEEEEEET-TEEEEEEEE
T ss_pred ECCCCcHHHeEEEEEC-CEEEEEEEE
Confidence 356663 45555545 799999984
Done!