Query         047842
Match_columns 465
No_of_seqs    161 out of 1935
Neff          10.9
Searched_HMMs 29240
Date          Mon Mar 25 05:47:16 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047842.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047842hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3k9v_A 1,25-dihydroxyvitamin D 100.0 3.7E-72 1.3E-76  550.0  37.1  418   24-462    27-482 (482)
  2 3nxu_A Cytochrome P450 3A4; al 100.0 4.4E-72 1.5E-76  549.6  33.0  422   18-464    10-476 (485)
  3 3tbg_A Cytochrome P450 2D6; mo 100.0 2.8E-72 9.4E-77  550.4  27.6  417   24-464    13-477 (479)
  4 3s79_A Cytochrome P450 19A1; o 100.0   2E-69   7E-74  533.1  39.5  411   24-464    48-497 (503)
  5 3ld6_A Lanosterol 14-alpha dem 100.0 3.7E-70 1.3E-74  531.8  27.7  411   24-463    14-454 (461)
  6 3n9y_A Cholesterol SIDE-chain  100.0 5.6E-69 1.9E-73  527.8  35.2  419   24-464    12-476 (487)
  7 1po5_A Cytochrome P450 2B4; ox 100.0 5.9E-69   2E-73  525.5  32.7  422   18-464     4-474 (476)
  8 2fdv_A Cytochrome P450 2A6; CY 100.0 1.4E-68 4.7E-73  522.9  35.1  422   18-464     4-474 (476)
  9 3pm0_A Cypib1, cytochrome P450 100.0 3.2E-69 1.1E-73  532.4  30.3  419   24-463    12-484 (507)
 10 3e6i_A CYPIIE1, P450-J, cytoch 100.0 1.9E-68 6.4E-73  522.7  34.7  416   24-464    13-473 (476)
 11 3swz_A Steroid 17-alpha-hydrox 100.0 7.8E-69 2.7E-73  527.5  32.1  418   24-463    11-479 (494)
 12 1r9o_A Cytochrome P450 2C9; mo 100.0 9.1E-69 3.1E-73  524.5  31.0  422   18-464     5-475 (477)
 13 2ve3_A Putative cytochrome P45 100.0 8.7E-68   3E-72  512.2  32.1  406   24-463    15-444 (444)
 14 2hi4_A Cytochrome P450 1A2; CY 100.0 1.7E-68 5.9E-73  524.5  26.3  418   24-463    19-488 (495)
 15 3czh_A Cytochrome P450 2R1; vi 100.0 4.4E-67 1.5E-71  512.5  33.2  418   24-464    15-477 (481)
 16 2ij2_A Cytochrome P450 BM3; mo 100.0 1.3E-66 4.5E-71  507.4  35.1  413   24-464     6-453 (470)
 17 3mdm_A Cholesterol 24-hydroxyl 100.0 4.2E-66 1.4E-70  503.0  36.1  395   44-463    11-442 (456)
 18 3qz1_A Steroid 21-hydroxylase; 100.0   4E-67 1.4E-71  515.9  25.0  394   43-463    43-484 (496)
 19 2cib_A Cytochrome P450 51; hem 100.0 5.4E-66 1.9E-70  501.2  28.0  409   24-463     7-449 (455)
 20 3dbg_A Putative cytochrome P45 100.0 3.3E-66 1.1E-70  504.8  24.4  404   24-462    26-461 (467)
 21 3gw9_A Sterol 14alpha-demethyl 100.0 9.5E-65 3.3E-69  493.0  28.0  403   24-463     6-450 (450)
 22 3i3k_A Lanosterol 14-alpha dem 100.0 1.7E-64 5.7E-69  492.3  27.8  409   24-461    14-453 (461)
 23 3dax_A Cytochrome P450 7A1; ch 100.0 1.9E-62 6.5E-67  481.9  28.6  424   24-462    16-485 (491)
 24 3b6h_A Prostacyclin synthase;  100.0 2.3E-61 7.7E-66  474.9  33.1  424   24-464    21-491 (498)
 25 3v8d_A Cholesterol 7-alpha-mon 100.0 9.6E-62 3.3E-66  476.5  27.8  423   24-461    16-484 (491)
 26 3b98_A Prostaglandin I2 syntha 100.0 2.2E-61 7.4E-66  472.4  29.3  409   24-463    21-471 (475)
 27 2cd8_A Cytochrome P450 monooxy 100.0 9.1E-62 3.1E-66  467.3  25.3  381   24-464    29-430 (436)
 28 1n97_A CYP175A1; electron tran 100.0 1.3E-61 4.5E-66  460.2  23.6  373   25-463     3-387 (389)
 29 1izo_A P450bsbeta, cytochrome  100.0 2.6E-58   9E-63  442.1  32.4  382   26-463     5-416 (417)
 30 3dsk_A Cytochrome P450 74A, ch 100.0 3.5E-58 1.2E-62  451.9  27.6  401   24-447    31-481 (495)
 31 1ued_A P450 OXYC, P450 monooxy 100.0 2.2E-58 7.6E-63  440.1  23.8  369   24-459    13-406 (406)
 32 3dan_A Cytochrome P450 74A2; A 100.0 5.2E-57 1.8E-61  441.2  32.8  394   24-439    12-455 (473)
 33 1jfb_A Nitric-oxide reductase  100.0 3.3E-58 1.1E-62  439.6  23.3  354   24-437     4-381 (404)
 34 3awm_A Fatty acid alpha-hydrox 100.0 6.5E-58 2.2E-62  439.1  24.1  380   26-462     4-413 (415)
 35 1s1f_A Putative cytochrome P45 100.0 1.2E-56 4.1E-61  428.1  28.4  369   24-460    11-405 (406)
 36 3a4g_A Vitamin D hydroxylase;  100.0 6.7E-57 2.3E-61  430.1  26.2  362   44-465    21-404 (411)
 37 3aba_A Cytochrome P450; oxidor 100.0 1.9E-57 6.4E-62  433.3  21.0  358   44-463    20-403 (403)
 38 1gwi_A CYP154C1, cytochrome P4 100.0 7.9E-58 2.7E-62  436.8  18.1  361   44-464    18-411 (411)
 39 2zbx_A Cytochrome P450-SU1; be 100.0 7.9E-57 2.7E-61  430.2  24.6  374   24-459     8-406 (412)
 40 3ejb_B Biotin biosynthesis cyt 100.0 2.3E-56   8E-61  426.8  26.5  359   44-463    14-397 (404)
 41 3abb_A CYP105D6, cytochrome P4 100.0 4.4E-57 1.5E-61  431.7  21.0  360   44-463    25-408 (408)
 42 2zwu_A Camphor 5-monooxygenase 100.0 1.2E-56 4.2E-61  428.5  22.1  372   24-463    14-411 (415)
 43 4fb2_A P450CIN; heme, monooxyg 100.0 1.5E-56 5.2E-61  426.7  22.5  355   44-464    20-395 (398)
 44 2jjn_A Cytochrome P450 113A1;  100.0 4.5E-56 1.5E-60  425.1  25.6  358   44-464    29-408 (411)
 45 1odo_A Putative cytochrome P45 100.0 2.1E-56 7.1E-61  427.0  22.8  358   44-461    16-407 (408)
 46 2uuq_A CYP130, cytochrome P450 100.0 1.2E-56 4.2E-61  428.7  20.9  360   43-463    25-414 (414)
 47 2xkr_A CYP142, putative cytoch 100.0   9E-56 3.1E-60  421.5  26.2  359   43-465    18-397 (398)
 48 1cpt_A Cytochrome P450-TERP; o 100.0 5.3E-56 1.8E-60  426.9  23.7  377   24-462     6-428 (428)
 49 2xbk_A PIMD protein; epoxidati 100.0   6E-56 2.1E-60  421.9  23.4  355   44-459    27-404 (404)
 50 2dkk_A Cytochrome P450; CYP158 100.0   6E-56   2E-60  423.2  22.9  358   44-463    28-411 (411)
 51 1z8o_A 6-deoxyerythronolide B  100.0 2.1E-55 7.3E-60  419.5  26.4  351   44-459    15-402 (404)
 52 3tyw_A Putative cytochrome P45 100.0 1.8E-55 6.3E-60  421.7  23.7  336   44-437    30-388 (417)
 53 3buj_A CALO2; heme, iron, meta 100.0 2.3E-55 7.9E-60  418.5  23.9  355   44-463    14-397 (397)
 54 3nc3_A Cytochrome P450 CYPX; c 100.0 1.9E-55 6.5E-60  423.6  23.5  366   44-461    54-440 (441)
 55 2y5n_A MYCG, P-450-like protei 100.0 2.6E-55 8.7E-60  419.7  23.7  357   44-459    38-417 (417)
 56 2z3t_A Cytochrome P450; monoxy 100.0 1.4E-55 4.8E-60  422.8  21.6  359   44-463    21-417 (425)
 57 2z36_A MOXA, cytochrome P450 t 100.0 4.2E-55 1.4E-59  417.9  24.2  358   44-459    23-407 (413)
 58 3lxh_A Cytochrome P450; heme,  100.0 1.3E-54 4.6E-59  416.3  23.9  357   44-464    39-419 (421)
 59 1q5d_A P450 epoxidase; cytochr 100.0 6.9E-55 2.3E-59  417.8  20.3  357   44-464    27-418 (419)
 60 3oft_A Cytochrome P450, CYP101 100.0 1.3E-54 4.3E-59  413.7  21.7  357   43-460    24-395 (396)
 61 1lfk_A OXYB, P450 monooxygenas 100.0 4.9E-55 1.7E-59  416.2  17.8  355   46-458    16-397 (398)
 62 3mgx_A Putative P450 monooxyge 100.0 1.9E-54 6.4E-59  413.1  21.6  357   44-462    38-415 (415)
 63 2wm5_A CYP124, putative cytoch 100.0 3.7E-54 1.3E-58  414.0  23.6  358   44-459    45-434 (435)
 64 3tkt_A Cytochrome P450; aromat 100.0   2E-54 6.9E-59  417.9  21.7  357   45-461    47-449 (450)
 65 3ivy_A Cytochrome P450 CYP125; 100.0 7.2E-55 2.5E-59  419.2  17.7  376   25-464    22-430 (433)
 66 3r9b_A Cytochrome P450 164A2;  100.0 6.8E-54 2.3E-58  411.6  23.8  356   43-463    29-418 (418)
 67 1n40_A P450 MT2, cytochrome P4 100.0 1.7E-54 5.9E-59  411.9  18.8  351   44-459    17-396 (396)
 68 3oo3_A OXY protein; cytochrome 100.0 2.5E-53 8.5E-58  403.0  26.4  354   43-458    12-383 (384)
 69 1io7_A Cytochrome P450 CYP119; 100.0 1.1E-53 3.9E-58  402.4  23.1  343   46-463     2-368 (368)
 70 3rwl_A Cytochrome P450 alkane  100.0 1.5E-52 5.1E-57  401.7  28.3  358   43-461    38-426 (426)
 71 3b4x_A 367AA long hypothetical 100.0 1.3E-52 4.3E-57  394.7  23.9  339   46-461     2-366 (367)
 72 4dnj_A Putative cytochrome P45 100.0 1.8E-52 6.2E-57  399.3  24.0  371   26-461    17-411 (412)
 73 2wiy_A XPLA-heme, cytochrome P 100.0 1.7E-51 5.9E-56  390.7  26.6  351   44-459    21-393 (394)
 74 2rfb_A Cytochrome P450; heme,  100.0 5.7E-52   2E-56  386.9  19.0  309   55-440     2-326 (343)
 75 3p3o_A Cytochrome P450; monoox 100.0 5.2E-52 1.8E-56  397.2  17.9  355   44-461    34-415 (416)
 76 4dxy_A Cytochrome P450, CYP101 100.0   3E-44   1E-48  341.8  25.1  352   44-459    38-413 (417)
 77 2yjn_B Erycii, DTDP-4-keto-6-d 100.0 7.1E-47 2.4E-51  351.8   2.1  327   28-458    42-380 (381)
 78 2ks1_B Epidermal growth factor  47.0      16 0.00053   21.3   2.5   10   13-22     29-38  (44)
 79 2l2t_A Receptor tyrosine-prote  44.4      19 0.00063   21.0   2.5    9   14-22     29-37  (44)
 80 2k1k_A Ephrin type-A receptor   37.6      33  0.0011   19.2   2.8   10   13-22     29-38  (38)
 81 3j1r_A Archaeal adhesion filam  35.5      43  0.0015   16.6   2.6   12    8-19     13-24  (26)
 82 2knc_A Integrin alpha-IIB; tra  34.1      54  0.0018   20.0   3.5   16    9-24     27-44  (54)
 83 2k1a_A Integrin alpha-IIB; sin  33.5      51  0.0017   18.9   3.2    9    9-17     25-33  (42)
 84 3bej_E Nuclear receptor coacti  23.2      78  0.0027   15.5   2.6   21  410-430     1-21  (26)
 85 2diu_A KIAA0430 protein; struc  21.9      73  0.0025   22.3   2.9   52   31-88     13-65  (96)
 86 2l8s_A Integrin alpha-1; trans  20.8 1.1E+02  0.0037   18.7   3.1   14    9-22     24-39  (54)
 87 2l6w_A Beta-type platelet-deri  24.3      24 0.00081   19.7   0.0   13   10-22     23-35  (39)

No 1  
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=100.00  E-value=3.7e-72  Score=549.97  Aligned_cols=418  Identities=20%  Similarity=0.349  Sum_probs=329.8

Q ss_pred             CCCCCCCcccchHHHhhc--ccchhHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCchhhh
Q 047842           24 SPMRNWPVLGMLPGLLAN--TWYFHEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPDFRM  101 (465)
Q Consensus        24 Pgp~~~p~~G~~~~~~~~--~~~~~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~~~  101 (465)
                      |||+++|++||++.+...  ...++.++. +++++||++|++   ++|+.++|+++||+.+++++.++ ..|.+++....
T Consensus        27 PGP~~~p~iG~~~~~~~~~~~~~~~~~~~-~l~~~YG~i~~~---~~g~~~~vvv~dp~~~~~il~~~-~~~~~r~~~~~  101 (482)
T 3k9v_A           27 PGPTNWPLLGSLLEIFWKGGLKKQHDTLA-EYHKKYGQIFRM---KLGSFDSVHLGSPSLLEALYRTE-SAHPQRLEIKP  101 (482)
T ss_dssp             CCSCCCTTTBTHHHHHHTTCGGGHHHHHH-HHHHHHCSEEEE---EETTEEEEEECSHHHHHHHHHTC-CSSCCCCCCHH
T ss_pred             CCCCCCCccccHHHHhccCCcccHHHHHH-HHHHHcCCEEEE---ccCCCCEEEEcCHHHHHHHHHhc-CCCCCCCCchH
Confidence            999999999999988643  246788899 999999999999   99999999999999999999875 66776653321


Q ss_pred             ---hh--cccCCcccccCChhHHHHHHHhhhhc-ChhHHHHHHHHHHHHHHhhchhhhhhhhcc-cCccccHHHHHHHHH
Q 047842          102 ---IM--EPLGDGVLNADGDLWKIQRKIIHSVM-KHNKFESALEKVAHQKMETGLIPVLDHASE-LGTVVDLQDVLKRFA  174 (465)
Q Consensus       102 ---~~--~~~~~~l~~~~g~~w~~~R~~~~~~~-~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~-~~~~vdl~~~~~~~~  174 (465)
                         ..  ...+.|+++.+|++|+++|+++.+.| +...++.+ .+.+.+.+ +.+++.+.+... +++++|+.+.+..++
T Consensus       102 ~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~f~~~~~~~~~-~~~i~~~~-~~l~~~l~~~~~~~g~~vd~~~~~~~~t  179 (482)
T 3k9v_A          102 WKAYRDHRNEAYGLMILEGQEWQRVRSAFQKKLMKPVEIMKL-DKKINEVL-ADFLERMDELCDERGRIPDLYSELNKWS  179 (482)
T ss_dssp             HHHHHHHHTCCCCTTTCCHHHHHHHHHHHHHHHTCHHHHGGG-HHHHHHHH-HHHHHHHHHHCCTTSCCTTHHHHHHHHH
T ss_pred             HHHHHHhcCCCCCceeCCCchHHHHHHHhhHHhcChHHHHHH-HHHHHHHH-HHHHHHHHHHHhcCCCCCCHHHHHHHHH
Confidence               11  12367899999999999999999997 66667766 77888886 777777765432 566899999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCC--CccchHHHHHHHHHHHHHHhhhchhHH---------HH-------HHHHhhhchHHHHH
Q 047842          175 FDNICMLVLGIDPNYLSVE--FPQTVYANAFNTMEQALLYRHIVPKIC---------WK-------LQKWLQIGEEKKLS  236 (465)
Q Consensus       175 ~~i~~~~~fG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~---------~~-------~~~~~~~~~~~~~~  236 (465)
                      +|++++++||.+++..+.+  .....+.+.+..+..........|..+         ..       +.+.+....+++.+
T Consensus       180 ~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~  259 (482)
T 3k9v_A          180 FESICLVLYEKRFGLLQKETEEEALTFITAIKTMMSTFGKMMVTPVELHKRLNTKVWQAHTLAWDTIFKSVKPCIDNRLQ  259 (482)
T ss_dssp             HHHHHHHHHSCCCCSSSTTSTTSSHHHHHHHHHHHTTGGGGSSSCHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcccccCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999998765432  122345555544433221111112101         00       00111111111111


Q ss_pred             Hhhhh-----------ccCCchHHHHHHHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCccc
Q 047842          237 RAWKL-----------SIDSSTSFLRDTAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGER  305 (465)
Q Consensus       237 ~~~~~-----------~~dl~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~  305 (465)
                      +....           ..+++++++.++++++++||+|||+++++|++++|++||++|+|+++|++ .+.+..+      
T Consensus       260 ~~~~~~~~d~l~~ll~~~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~-~v~~~~~------  332 (482)
T 3k9v_A          260 RYSQQPGADFLCDIYQQDHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQ-SVLPDNQ------  332 (482)
T ss_dssp             HTTTCTTSCHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH-HHSCTTC------
T ss_pred             HhccCCchHHHHHHHhccCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCHHHHHHHHHHHH-HHhCCCC------
Confidence            11000           01478999999999999999999999999999999999999999999999 8876432      


Q ss_pred             ccccChhhhccchhHHHHHhhhCCCCCCCcCcceeccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCC
Q 047842          306 RFFFNTKQANNLVYLHAALCETLRLYPPVPYNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERW  385 (465)
Q Consensus       306 ~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rf  385 (465)
                        .++.+++.+||||+|||+|+||++|+++...|.+.+ |+.++||.|||||.|+++.+++||||++| +||++|+||||
T Consensus       333 --~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~r~~~~-d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~-~~p~~F~PeRf  408 (482)
T 3k9v_A          333 --TPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDK-PTVLGEYALPKGTVLTLNTQVLGSSEDNF-EDSHKFRPERW  408 (482)
T ss_dssp             --CCCGGGGGGCHHHHHHHHHHHHHSCSCCEEEEECSS-CEEETTEEECTTCEEEEECSGGGGCTTTC-SSTTSCCGGGG
T ss_pred             --CCCHHHHhhCHHHHHHHHHHhhcCCCCcCcccccCC-ceeeCCEEECCCCEEEEccccccCCCccC-CCcCccCcccc
Confidence              689999999999999999999999999986555544 56669999999999999999999999999 99999999999


Q ss_pred             CCCCCcccccCCccccccCCCCCCCcChHHHHHHHHHHHHHHHhccEEEeecCCCccCcceEEeecCCCeeEEEEec
Q 047842          386 ISEKGCIVHVPTYKFTAFHAGPRNCLGKDKALIQMKMVASAVIGNYHVKVAKGHPVLPRKSIILNMKYGLKVQLSKR  462 (465)
Q Consensus       386 l~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  462 (465)
                      ++++++   ..+..++|||.|+|.|+|++||++|++++++.|+++|+|++.++.++......++.|++++++++++|
T Consensus       409 l~~~~~---~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~R  482 (482)
T 3k9v_A          409 LQKEKK---INPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATDNEPVEMLHLGILVPSRELPIAFRPR  482 (482)
T ss_dssp             TCTTSC---CCGGGCCTTCCSTTSCSCHHHHHHHHHHHHHHHHHHEEEEESCCCCCCEEESSSEEESSSCCEEEEEC
T ss_pred             CCCCCC---CCCccccCCCCCCcCCccHHHHHHHHHHHHHHHHHhcEEeccCCCCcccccceeecCCCCcceEEeeC
Confidence            987532   34668999999999999999999999999999999999999877777666677889999999999998


No 2  
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=100.00  E-value=4.4e-72  Score=549.60  Aligned_cols=422  Identities=23%  Similarity=0.339  Sum_probs=326.9

Q ss_pred             hhcCCC-CCCCCCCcccchHHHhhcccchhHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcC-CCCCCC
Q 047842           18 SWSDRN-SPMRNWPVLGMLPGLLANTWYFHEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKN-FSNYPK   95 (465)
Q Consensus        18 ~~~~r~-Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~-~~~~~~   95 (465)
                      +|++++ |||+++|++||++.+..   .++.++. +++++||++|++   ++|+.++|+|+||+.+++++.++ ...|..
T Consensus        10 ~~k~~~~PGP~~~PliGn~~~~~~---~~~~~~~-~~~~~yG~i~~~---~~g~~~~vvv~dp~~i~~il~~~~~~~f~~   82 (485)
T 3nxu_A           10 LFKKLGIPGPTPLPFLGNILSYHK---GFCMFDM-ECHKKYGKVWGF---YDGQQPVLAITDPDMIKTVLVKECYSVFTN   82 (485)
T ss_dssp             HHHHHTCCCCCCBTTTBTGGGGGG---CHHHHHH-HHHHHHCSEEEE---EETTEEEEEECCHHHHHHHHTTTTTTTCCC
T ss_pred             HHhhCCCCCCCCcCeecCcHHhhc---ChHHHHH-HHHHHcCCeEEE---EeCCCCEEEECCHHHHHHHHhccchhhccC
Confidence            677777 99999999999998854   4778888 999999999999   89999999999999999999876 455655


Q ss_pred             CchhhhhhcccCCcccccCChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHHHHHHH
Q 047842           96 GPDFRMIMEPLGDGVLNADGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVLKRFAF  175 (465)
Q Consensus        96 ~~~~~~~~~~~~~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~  175 (465)
                      ++.... ....+.++++.+|+.|+++|+++++.|+...++.+ .+.+++.+ +.+++.+.+..+.++++|+.+.+..+++
T Consensus        83 r~~~~~-~~~~~~~l~~~~g~~w~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~~~~~g~~~d~~~~~~~~~~  159 (485)
T 3nxu_A           83 RRPFGP-VGFMKSAISIAEDEEWKRLRSLLSPTFTSGKLKEM-VPIIAQYG-DVLVRNLRREAETGKPVTLKDVFGAYSM  159 (485)
T ss_dssp             CCCCSC-CGGGGGSTTTCCHHHHHHHHHHHGGGGCHHHHHHH-HHHHHHHH-HHHHHHHHHHHHHTCCEEHHHHHHHHHH
T ss_pred             Cccccc-ccccccCccccCCcHHHHHHhhcChhcCHHHHHHH-HHHHHHHH-HHHHHHHHHHhccCCcCcHHHHHHHHHH
Confidence            443321 12446788899999999999999999999999998 78888887 7777777655556788999999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCCccchHHHHHHHHHH------HHHHhhhchhHH------------HHHHHHhhhchHHHHHH
Q 047842          176 DNICMLVLGIDPNYLSVEFPQTVYANAFNTMEQ------ALLYRHIVPKIC------------WKLQKWLQIGEEKKLSR  237 (465)
Q Consensus       176 ~i~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~p~~~------------~~~~~~~~~~~~~~~~~  237 (465)
                      |+++.++||.+++..+..  ...+.+....+..      .......+|...            .....++....++..+.
T Consensus       160 dvi~~~~fG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (485)
T 3nxu_A          160 DVITSTSFGVNIDSLNNP--QDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKES  237 (485)
T ss_dssp             HHHHHHHHSCCCCGGGCT--TCHHHHHHTTSCCCCTTSHHHHHHHHCTTHHHHHHHTTCCSSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCccccccCC--CcHHHHHHHHHhchhhHHHHHHHHHHhhhhHHHHHHhhhhhchHHHHHHHHHHHHHHHHH
Confidence            999999999998765432  1222222211100      000000001000            00111111111110000


Q ss_pred             h---------------hhh--------ccCCchHHHHHHHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhh
Q 047842          238 A---------------WKL--------SIDSSTSFLRDTAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATI  294 (465)
Q Consensus       238 ~---------------~~~--------~~dl~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~  294 (465)
                      .               ...        -..++++++.++++.+++||+|||+++++|++++|++||++|+|+++|++ .+
T Consensus       238 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~-~~  316 (485)
T 3nxu_A          238 RLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEID-AV  316 (485)
T ss_dssp             HHHCC---CCCHHHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH-HH
T ss_pred             HHhccCCCcccHHHHHHHhhhccccccccCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHH-HH
Confidence            0               000        11378899999999999999999999999999999999999999999999 88


Q ss_pred             hccccccCcccccccChhhhccchhHHHHHhhhCCCCCCCcCcceeccCccccCCCeeeCCCCEEEEeecccccCCCCcC
Q 047842          295 VMHKKEEDGERRFFFNTKQANNLVYLHAALCETLRLYPPVPYNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWG  374 (465)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~  374 (465)
                      .+...        .++++++.+||||+|||+|+||++|+++...|.+ .+|+.++||.|||||.|+++.+++||||++| 
T Consensus       317 ~~~~~--------~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~R~~-~~d~~i~g~~Ip~Gt~V~~~~~~~~~d~~~~-  386 (485)
T 3nxu_A          317 LPNKA--------PPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVC-KKDVEINGMFIPKGVVVMIPSYALHRDPKYW-  386 (485)
T ss_dssp             STTTC--------CCCHHHHHHCHHHHHHHHHHHHHSCSCSCEEEEC-CSCEEETTEEECTTCEEEECHHHHHTCTTTC-
T ss_pred             hccCC--------CCCHHHHhcChHHHHHHHHHHhcCCCccCcceee-CCCeeECCEEECCCCEEEEchHHhcCChhhc-
Confidence            76432        7899999999999999999999999998755544 5566779999999999999999999999999 


Q ss_pred             CCCCCcCCCCCCCCCCcccccCCccccccCCCCCCCcChHHHHHHHHHHHHHHHhccEEEeecCCC--ccCcceEEeecC
Q 047842          375 NDCLEFKPERWISEKGCIVHVPTYKFTAFHAGPRNCLGKDKALIQMKMVASAVIGNYHVKVAKGHP--VLPRKSIILNMK  452 (465)
Q Consensus       375 ~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~--~~~~~~~~~~~~  452 (465)
                      +||++|+||||+++++  ....+..++|||.|+|.|+|++||++|++++++.|+++|+|++.++.+  .....+.++.|+
T Consensus       387 ~dp~~F~PeR~l~~~~--~~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~p~  464 (485)
T 3nxu_A          387 TEPEKFLPERFSKKNK--DNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQPE  464 (485)
T ss_dssp             SSTTSCCGGGGSHHHH--TTSCTTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEECCTTCCSSCCBCSSSSCCBS
T ss_pred             CCccCcCccccCCCcc--ccCCCCCccCCCCCCcCCchHHHHHHHHHHHHHHHHHhcEEEeCCCCCCCcccCCCeeccCC
Confidence            9999999999997532  123456799999999999999999999999999999999999986543  334445678898


Q ss_pred             CCeeEEEEecCC
Q 047842          453 YGLKVQLSKRSL  464 (465)
Q Consensus       453 ~~~~~~~~~r~~  464 (465)
                      ++++|++++|+.
T Consensus       465 ~~~~~~~~~r~~  476 (485)
T 3nxu_A          465 KPVVLKVESRDG  476 (485)
T ss_dssp             SCCEEEEEEC--
T ss_pred             CCeEEEEEEccC
Confidence            899999999964


No 3  
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=100.00  E-value=2.8e-72  Score=550.41  Aligned_cols=417  Identities=18%  Similarity=0.247  Sum_probs=312.8

Q ss_pred             CCCCCCCcccchHHHhhcccchhHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCchhhh--
Q 047842           24 SPMRNWPVLGMLPGLLANTWYFHEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPDFRM--  101 (465)
Q Consensus        24 Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~~~--  101 (465)
                      |||+++|++||++.+..  .+.+..+. +|++|||+||++   ++|+.++|+|+||+.+++++.++...|..++....  
T Consensus        13 PGP~~lP~iGn~~~~~~--~~~~~~~~-~~~~kYG~i~~~---~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~~~~~~~   86 (479)
T 3tbg_A           13 PGPLPLPGLGNLLHVDF--QNTPYCFD-QLRRRFGDVFSL---QLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQ   86 (479)
T ss_dssp             CCSCCBTTTBTGGGCCT--TSHHHHHH-HHHHHHCSEEEE---EETTEEEEEEEHHHHHHHHHTTTGGGSCBCCCCGGGG
T ss_pred             CCCCCcCcccchHhhcC--CCHHHHHH-HHHHHhCCEEEE---EECCeeEEEECCHHHHHHHHHhCChhhcCCCchHHHH
Confidence            79999999999998743  35777888 999999999999   99999999999999999999877566654433221  


Q ss_pred             -hh-cccCCc-ccccCChhHHHHHHHhhhhcChhHHHH-HHHHHHHHHHhhchhhhhhhhcccCccccHHHHHHHHHHHH
Q 047842          102 -IM-EPLGDG-VLNADGDLWKIQRKIIHSVMKHNKFES-ALEKVAHQKMETGLIPVLDHASELGTVVDLQDVLKRFAFDN  177 (465)
Q Consensus       102 -~~-~~~~~~-l~~~~g~~w~~~R~~~~~~~~~~~l~~-~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~i  177 (465)
                       .. ...+.+ ++..+|+.|+++|+++.+.|+...+.. .++..+.... +.+...+..  ..++.+|+...+..+++++
T Consensus        87 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~--~~~~~~~~~~~~~~~~~~~  163 (479)
T 3tbg_A           87 ILGFGPRSQGVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEEA-ACLCAAFAN--HSGRPFRPNGLLDKAVSNV  163 (479)
T ss_dssp             GGTCBTTBCCSTTCCSSHHHHHHHHHHHHHHHHTTSTTCHHHHHHHHHH-HHHHHHHHT--TTTCCBCTHHHHHHHHHHH
T ss_pred             HhccCCCCCceeeCCCCHHHHHHHHHHHHHhcchhhhHHHHHHHHHHHH-HHHHHHHHh--ccCCcccHHHHHHHHHHHH
Confidence             11 222344 455679999999999999987766532 2244444443 555554443  4556899999999999999


Q ss_pred             HHHHHhCCCCCCCCCCCccchHHHHHHHHHHHH----H-Hhhhch------hHHHHH---HHHhhhchHHHHHHhhhh--
Q 047842          178 ICMLVLGIDPNYLSVEFPQTVYANAFNTMEQAL----L-YRHIVP------KICWKL---QKWLQIGEEKKLSRAWKL--  241 (465)
Q Consensus       178 ~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~p------~~~~~~---~~~~~~~~~~~~~~~~~~--  241 (465)
                      ++.++||.+++..+.+  ...............    . .....+      ......   .+.......+.+......  
T Consensus       164 ~~~~~fg~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (479)
T 3tbg_A          164 IASLTCGRRFEYDDPR--FLRLLDLAQEGLKEESGFLREVLNAVPVLLHIPALAGKVLRFQKAFLTQLDELLTEHRMTWD  241 (479)
T ss_dssp             HHHHHHSCCCCTTCHH--HHHHHHHHHHHHHTTSSHHHHHHHHSGGGGGSHHHHHHHTHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             HHHhhcCCcccccchh--hhhhhhhhhhhhhhhhhhhhhhhcccchhccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            9999999998765421  111111111111000    0 000000      000000   000000111111111000  


Q ss_pred             -----------------------ccCCchHHHHHHHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccc
Q 047842          242 -----------------------SIDSSTSFLRDTAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHK  298 (465)
Q Consensus       242 -----------------------~~dl~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~  298 (465)
                                             ...++++++.++++++++||+|||+++++|++++|++||++|+||++|++ .+.+..
T Consensus       242 ~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~-~~~~~~  320 (479)
T 3tbg_A          242 PAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEID-DVIGQV  320 (479)
T ss_dssp             TTSCCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH-HHTCSS
T ss_pred             cccccchhhhhhhhhhhhcccCCccchhhHHHHHHHHHHHHhhhhhhHHHHHHHHHHhccCHHHHHHHHHHHH-HHHhhc
Confidence                                   01368999999999999999999999999999999999999999999999 877644


Q ss_pred             cccCcccccccChhhhccchhHHHHHhhhCCCCCCCcCcceeccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCC
Q 047842          299 KEEDGERRFFFNTKQANNLVYLHAALCETLRLYPPVPYNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCL  378 (465)
Q Consensus       299 ~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~  378 (465)
                      +        .++.+++.+||||+|||+|+||++|+++...|+++.+|+.++||.|||||.|+++.+++||||++| +||+
T Consensus       321 ~--------~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~~~~~~d~~~~g~~IP~Gt~V~~~~~~~h~d~~~~-~dP~  391 (479)
T 3tbg_A          321 R--------RPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVW-EKPF  391 (479)
T ss_dssp             S--------CCCHHHHTTCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTS-SSTT
T ss_pred             c--------ccchhhhccccccccceeeeccccccccccceeecCCCceECCEEecCCCeeeechhhhcCChhhC-CCcc
Confidence            3        789999999999999999999999999999998887788889999999999999999999999999 9999


Q ss_pred             CcCCCCCCCCCCcccccCCccccccCCCCCCCcChHHHHHHHHHHHHHHHhccEEEeecCCCcc---CcceEEeecCCCe
Q 047842          379 EFKPERWISEKGCIVHVPTYKFTAFHAGPRNCLGKDKALIQMKMVASAVIGNYHVKVAKGHPVL---PRKSIILNMKYGL  455 (465)
Q Consensus       379 ~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~---~~~~~~~~~~~~~  455 (465)
                      +|+||||++++++.  ..+..|+|||+|+|.|||++||++|+++++|.||++|+|+++++++..   ...+++..|+ ++
T Consensus       392 ~F~PeRfl~~~~~~--~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~P~-~~  468 (479)
T 3tbg_A          392 RFHPEHFLDAQGHF--VKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQPRPSHHGVFAFLVSPS-PY  468 (479)
T ss_dssp             SCCGGGGBCTTCCB--CCCTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEECCTTSCCCCSCEEESSSEEEC-CC
T ss_pred             ccCccccCCCCccc--CCCCceecCCCCCcCChhHHHHHHHHHHHHHHHHHccEEEeCCCCCCccccccceeeecCC-Ce
Confidence            99999999876432  346789999999999999999999999999999999999998765432   2345566774 79


Q ss_pred             eEEEEecCC
Q 047842          456 KVQLSKRSL  464 (465)
Q Consensus       456 ~~~~~~r~~  464 (465)
                      +|+++||++
T Consensus       469 ~v~~~pRs~  477 (479)
T 3tbg_A          469 ELCAVPRHH  477 (479)
T ss_dssp             CBEEEEC--
T ss_pred             EEEEEECCC
Confidence            999999975


No 4  
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=100.00  E-value=2e-69  Score=533.13  Aligned_cols=411  Identities=20%  Similarity=0.268  Sum_probs=313.2

Q ss_pred             CCCCCCCcccchHHHhhcc-cchhHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCchhh--
Q 047842           24 SPMRNWPVLGMLPGLLANT-WYFHEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPDFR--  100 (465)
Q Consensus        24 Pgp~~~p~~G~~~~~~~~~-~~~~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~~--  100 (465)
                      |||+++|++||++++.... ...+..+. +++++||++|++   ++|+.++|+++||+.+++++++  ..|..++...  
T Consensus        48 PGP~~~P~iGnl~~~~~~~~~~~~~~~~-~~~~~yG~v~~~---~~g~~~~vvv~~p~~~~~il~~--~~~~~r~~~~~~  121 (503)
T 3s79_A           48 PGPGYCMGIGPLISHGRFLWMGIGSACN-YYNRVYGEFMRV---WISGEETLIISKSSSMFHIMKH--NHYSSRFGSKLG  121 (503)
T ss_dssp             CSCCCCSSSHHHHHHHHHHHHCHHHHHH-HHHHHSCSEEEE---ESSSSEEEEECCHHHHHHHHHS--GGGCCCCCCHHH
T ss_pred             CCCCCCceeeehhccccccccchhHHHH-HHHHHhCCeEEE---EeCCccEEEECCHHHHHHHHhc--CCCCCcchhhhh
Confidence            8999999999999885432 24566788 999999999999   9999999999999999999975  3444433221  


Q ss_pred             -hhhcccCCcc-cccCChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHHHHHHHHHH
Q 047842          101 -MIMEPLGDGV-LNADGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVLKRFAFDNI  178 (465)
Q Consensus       101 -~~~~~~~~~l-~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~i~  178 (465)
                       ......+.++ +..+|+.|+++|+++.+.|+...++.+ .+.+.+++ +.+++.+.+..+.++.+|+.+.+..++++++
T Consensus       122 ~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~f~~~~l~~~-~~~~~~~~-~~~l~~l~~~~~~~~~vdl~~~~~~~~~~vi  199 (503)
T 3s79_A          122 LQCIGMHEKGIIFNNNPELWKTTRPFFMKALSGPGLVRM-VTVCAESL-KTHLDRLEEVTNESGYVDVLTLLRRVMLDTS  199 (503)
T ss_dssp             HHHHTCTTSSSTTCCCHHHHHHHHHHHHHHTSTHHHHHH-HHHHHHHH-HHHHTTGGGTBCTTSCBCHHHHHHHHHHHHH
T ss_pred             hhhhccCCCceeeCCCccHHHHHHHhhhHhhChHHHHHH-HHHHHHHH-HHHHHHHHHHhcCCCeEcHHHHHHHHHHHHH
Confidence             1113345564 557799999999999999999999888 67777776 5566666554455678999999999999999


Q ss_pred             HHHHhCCCCCCCCCCCccchHHHHHHHHHHHHHHh---hhchhHHH-------HHHHHhhhchHHHHHHhhh--------
Q 047842          179 CMLVLGIDPNYLSVEFPQTVYANAFNTMEQALLYR---HIVPKICW-------KLQKWLQIGEEKKLSRAWK--------  240 (465)
Q Consensus       179 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~p~~~~-------~~~~~~~~~~~~~~~~~~~--------  240 (465)
                      ++++||.+++..+   ....+...+..........   ...+....       .+.+.+....+++.+....        
T Consensus       200 ~~~~fG~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  276 (503)
T 3s79_A          200 NTLFLRIPLDESA---IVVKIQGYFDAWQALLIKPDIFFKISWLYKKYEKSVKDLKDAIEVLIAEKRRRISTEEKLEECM  276 (503)
T ss_dssp             HHHHTCCCCCHHH---HHHHHHHHHHHHHHHTTCCHHHHHSGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTTTTTC
T ss_pred             HHHHcCcccCchh---HHHHHHHHHHHHHHHhcCcHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchHH
Confidence            9999999875211   1111222222111111000   00111001       1111111111111111000        


Q ss_pred             ----------hccCCchHHHHHHHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccC
Q 047842          241 ----------LSIDSSTSFLRDTAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFN  310 (465)
Q Consensus       241 ----------~~~dl~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~  310 (465)
                                .-.+++++++.++++.+++||+|||+++++|++++|++||++|+|+++|++ .+.++.         .++
T Consensus       277 d~l~~ll~~~~~~~l~~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~kl~~Ei~-~v~~~~---------~~~  346 (503)
T 3s79_A          277 DFATELILAEKRGDLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQ-TVIGER---------DIK  346 (503)
T ss_dssp             CHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH-HHTTTS---------CCC
T ss_pred             HHHHHHHHhcccCCCCHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCHHHHHHHHHHHH-HHhCCC---------CCC
Confidence                      011478999999999999999999999999999999999999999999999 887632         789


Q ss_pred             hhhhccchhHHHHHhhhCCCCCCCcCcceeccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCC
Q 047842          311 TKQANNLVYLHAALCETLRLYPPVPYNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKG  390 (465)
Q Consensus       311 ~~~l~~l~~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~  390 (465)
                      .+++++|||++|||+|+||++|+++...|++++| +.++||.|||||.|+++.+++||| ++| +||++|+||||+++. 
T Consensus       347 ~~~~~~lpyl~avi~E~lRl~p~~~~~~r~~~~d-~~~~g~~ip~Gt~v~~~~~~~~~d-~~~-~dp~~F~PeRf~~~~-  422 (503)
T 3s79_A          347 IDDIQKLKVMENFIYESMRYQPVVDLVMRKALED-DVIDGYPVKKGTNIILNIGRMHRL-EFF-PKPNEFTLENFAKNV-  422 (503)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHSCSSCCEEEECSSC-EEETTEEECTTCEEEECHHHHTTT-SSC-SSTTSCCGGGGSSCC-
T ss_pred             HHHHhcCHHHHHHHHhhhccCCCcccccccccCC-eeECCEEECCCCEEEeehHHhCCC-ccC-CChhhCChhhcCCCC-
Confidence            9999999999999999999999999988777665 555999999999999999999998 999 999999999999752 


Q ss_pred             cccccCCccccccCCCCCCCcChHHHHHHHHHHHHHHHhccEEEeecCCCc---cCcceEEeecCCC---eeEEEEecCC
Q 047842          391 CIVHVPTYKFTAFHAGPRNCLGKDKALIQMKMVASAVIGNYHVKVAKGHPV---LPRKSIILNMKYG---LKVQLSKRSL  464 (465)
Q Consensus       391 ~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~~r~~  464 (465)
                           ....++|||+|+|.|||++||.+|++++++.|+++|+|+++++.+.   ....+.+..|..+   ++|++++|+.
T Consensus       423 -----~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~v~~~~R~~  497 (503)
T 3s79_A          423 -----PYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQCVESIQKIHDLSLHPDETKNMLEMIFTPRNS  497 (503)
T ss_dssp             -----CTTTCCSSCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEEESTTCCTTTSCEEESSSEEECTTSCCCCEEEEECC-
T ss_pred             -----CcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCCCCccccccccceeecCCCccceeeEEeccCCc
Confidence                 3457999999999999999999999999999999999999876533   3345677788765   9999999963


No 5  
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=100.00  E-value=3.7e-70  Score=531.79  Aligned_cols=411  Identities=16%  Similarity=0.231  Sum_probs=317.5

Q ss_pred             CCCC-CCCcccchHHHhhcccchhHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCchhhhh
Q 047842           24 SPMR-NWPVLGMLPGLLANTWYFHEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPDFRMI  102 (465)
Q Consensus        24 Pgp~-~~p~~G~~~~~~~~~~~~~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~~~~  102 (465)
                      |+|+ ++|++||++++..+   ++.++. ++++|||+||++   ++|+.++|+|+||+.+++++.++...+.+++.+...
T Consensus        14 P~~~~~lP~iG~~~~~~~~---~~~~~~-~~~~kYG~i~~~---~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~~   86 (461)
T 3ld6_A           14 PYIFSPIPFLGHAIAFGKS---PIEFLE-NAYEKYGPVFSF---TMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRL   86 (461)
T ss_dssp             CBCCCSSTTTBTHHHHHHC---HHHHHH-HHHHHHCSEEEE---EETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHH
T ss_pred             CCCCCCcCeeeeHHHhhhC---HHHHHH-HHHHHhCCEEEE---EECCccEEEEeCHHHHHHHHhCCccccCCCcchhhh
Confidence            4444 49999999998754   788999 999999999999   999999999999999999998876677777666555


Q ss_pred             h-cccCCcc-cccCChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHHHHHHHHHHHH
Q 047842          103 M-EPLGDGV-LNADGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVLKRFAFDNICM  180 (465)
Q Consensus       103 ~-~~~~~~l-~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~i~~~  180 (465)
                      . ...|.++ +..+|+.|+++|+++.+.|+...++++ .+.+++.+ +.+.+.+.+    +..+|+.+.+..+++++++.
T Consensus        87 ~~~~~g~~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~-~~~i~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~  160 (461)
T 3ld6_A           87 TTPVFGKGVAYDVPNPVFLEQKKMLKSGLNIAHFKQH-VSIIEKET-KEYFESWGE----SGEKNVFEALSELIILTASH  160 (461)
T ss_dssp             HHHHHCTTSGGGSCHHHHHHHHHHHHHHSSHHHHHHH-HHHHHHHH-HHHGGGGCS----EEEEEHHHHHHHHHHHHHHH
T ss_pred             hhccCCCccccCCCcHHHHHHHHhccccccHHHHhhh-hHHHHHHH-HHHHHHHhh----cCCccHHHHHHHHHHHHHHH
Confidence            4 4556665 557899999999999999999999988 67787776 555555532    34689999999999999999


Q ss_pred             HHhCCCCCCCCCCCccchHHHHHHHHHHH---HH--Hhhhchh-HHHHH---HHHhhhchHHHHHHhhh-----------
Q 047842          181 LVLGIDPNYLSVEFPQTVYANAFNTMEQA---LL--YRHIVPK-ICWKL---QKWLQIGEEKKLSRAWK-----------  240 (465)
Q Consensus       181 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~p~-~~~~~---~~~~~~~~~~~~~~~~~-----------  240 (465)
                      ++||.+++....    ..+...+..+...   ..  .....+. .....   .+.+.....+.+++...           
T Consensus       161 ~~fG~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~~d~l~~  236 (461)
T 3ld6_A          161 CLHGKEIRSQLN----EKVAQLYADLDGGFSHAAWLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQSQEKIDDILQT  236 (461)
T ss_dssp             HHTCHHHHHTCC----HHHHHHHHHHHTTSSHHHHHSCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCSHHHH
T ss_pred             HHcCcchhhhhh----hhhhhhhhhhhhhhhhHHHhhhhhccCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcchhhh
Confidence            999987653321    2222222222111   00  1111110 01111   01111111111111110           


Q ss_pred             -------hccCCchHHHHHHHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhh
Q 047842          241 -------LSIDSSTSFLRDTAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQ  313 (465)
Q Consensus       241 -------~~~dl~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~  313 (465)
                             .-..++++++.++++.+++||+|||+.+++|++++|++||++|+|+++|++ .+.+....       .++.++
T Consensus       237 ll~~~~~~~~~ls~~ei~~~~~~~~~aG~dTt~~~l~~~l~~L~~~P~~q~kl~~Ei~-~v~~~~~~-------~~~~~~  308 (461)
T 3ld6_A          237 LLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQK-TVCGENLP-------PLTYDQ  308 (461)
T ss_dssp             HHTCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH-HHHCTTCC-------CCCHHH
T ss_pred             hHHhhhcccCCCCHHHHHHHHHhhhhcccccccccchhhhcccccChHHHHHHHHHHH-HHhccccc-------chhHHH
Confidence                   001368999999999999999999999999999999999999999999999 88865432       678999


Q ss_pred             hccchhHHHHHhhhCCCCCCCcCcceeccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCccc
Q 047842          314 ANNLVYLHAALCETLRLYPPVPYNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIV  393 (465)
Q Consensus       314 l~~l~~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~  393 (465)
                      +++||||+|||+|+||++|+++...|+++++ +.++||.|||||.|+++.+++||||++| +||++|+||||+++++.  
T Consensus       309 l~~lpyl~avi~E~lRl~p~~~~~~r~~~~d-~~~~g~~ip~Gt~v~~~~~~~~~d~~~~-~dP~~F~PeRfl~~~~~--  384 (461)
T 3ld6_A          309 LKDLNLLDRCIKETLRLRPPIMIMMRMARTP-QTVAGYTIPPGHQVCVSPTVNQRLKDSW-VERLDFNPDRYLQDNPA--  384 (461)
T ss_dssp             HHTCHHHHHHHHHHHHHSCSCCCEEEEESSC-EEETTEEECTTCEEEECHHHHTTCTTTC-TTTTSCCGGGGGSCCHH--
T ss_pred             HHHHhhhhheeeeccccCCchhccccccccc-eeeCCcccCCCCeeeechHhhcCCcccc-CCccccCccccCCCCcc--
Confidence            9999999999999999999999888877765 5559999999999999999999999999 99999999999987532  


Q ss_pred             ccCCccccccCCCCCCCcChHHHHHHHHHHHHHHHhccEEEeecCCCccCcceEEeecCCCeeEEEEecC
Q 047842          394 HVPTYKFTAFHAGPRNCLGKDKALIQMKMVASAVIGNYHVKVAKGHPVLPRKSIILNMKYGLKVQLSKRS  463 (465)
Q Consensus       394 ~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  463 (465)
                      ...+..|+|||+|+|.|||++||++|++++++.||++|+|+++++.........+..+++++.|++++|+
T Consensus       385 ~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~l~~~~~~~~~~~~~~~~p~~~~v~~~~Rs  454 (461)
T 3ld6_A          385 SGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVNYTTMIHTPENPVIRYKRRS  454 (461)
T ss_dssp             HHSSSSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCCCCBCCSSSSCCBSSCEEEEEECC
T ss_pred             cCCCCccccCCCcCcCChhHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcccccceEEcCCceEEEEEECC
Confidence            2346679999999999999999999999999999999999998775443333333444457999999995


No 6  
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=100.00  E-value=5.6e-69  Score=527.83  Aligned_cols=419  Identities=18%  Similarity=0.203  Sum_probs=324.0

Q ss_pred             CCCCCCCcccchHHHhhc--ccchhHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCchhhh
Q 047842           24 SPMRNWPVLGMLPGLLAN--TWYFHEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPDFRM  101 (465)
Q Consensus        24 Pgp~~~p~~G~~~~~~~~--~~~~~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~~~  101 (465)
                      |||++.|+. +++.+...  ...++.++. ++++|||+||++   ++|+.++|+|+||+.+++++.+. +.|++++....
T Consensus        12 PGP~~~~~~-~~~~~~~~~~~~~~~~~~~-~l~~kYG~i~~~---~~g~~~~vvv~dp~~~~~il~~~-~~f~~r~~~~~   85 (487)
T 3n9y_A           12 PSPGDNGWL-NLYHFWRETGTHKVHLHHV-QNFQKYGPIYRE---KLGNVESVYVIDPEDVALLFKSE-GPNPERFLIPP   85 (487)
T ss_dssp             CCSCSCHHH-HHHHHHHHTCGGGHHHHHH-HHHHHHCSEEEE---EETTEEEEEECCHHHHHHHHHTC-CSSCCCCCCHH
T ss_pred             CCCCCCChh-hHHHHHhcCCCcchhHHHH-HHHHHcCceeec---cCCCCCEEEEcCHHHHHHHHHhC-CCCCCCCCCcH
Confidence            999988876 77766432  246788899 999999999999   89999999999999999999875 56666543221


Q ss_pred             h-----hcccCCcccccCChhHHHHHHHhhhh-cChhHHHHHHHHHHHHHHhhchhhhhhhhc----ccCccccHHHHHH
Q 047842          102 I-----MEPLGDGVLNADGDLWKIQRKIIHSV-MKHNKFESALEKVAHQKMETGLIPVLDHAS----ELGTVVDLQDVLK  171 (465)
Q Consensus       102 ~-----~~~~~~~l~~~~g~~w~~~R~~~~~~-~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~----~~~~~vdl~~~~~  171 (465)
                      .     ....+.++++.+|+.|+++|+++++. |+...++.+ .+.+++.+ +.+++.+.+..    ++++++|+.+.+.
T Consensus        86 ~~~~~~~~~~~~~l~~~~g~~w~~~Rr~l~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~~~~~~~~~~~~vd~~~~~~  163 (487)
T 3n9y_A           86 WVAYHQYYQRPIGVLLKKSAAWKKDRVALNQEVMAPEATKNF-LPLLDAVS-RDFVSVLHRRIKKAGSGNYSGDISDDLF  163 (487)
T ss_dssp             HHHHHHHTTCCCCGGGCCHHHHHHHHHHHHHHHTSHHHHTTH-HHHHHHHH-HHHHHHHHHHHHHHTSSSEEECCHHHHH
T ss_pred             HHHHHHHccccCCCccCCcHHHHHHHHhcCcccCCchHHHHh-hhHHHHHH-HHHHHHHHHHhcccccCCCCccHHHHHH
Confidence            1     12235689999999999999999995 899999888 78888887 66666665421    2355799999999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCCCc--cchHHHHHHHHHHHHHHhhhchhHHH---------HH-------HHHhhhchHH
Q 047842          172 RFAFDNICMLVLGIDPNYLSVEFP--QTVYANAFNTMEQALLYRHIVPKICW---------KL-------QKWLQIGEEK  233 (465)
Q Consensus       172 ~~~~~i~~~~~fG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~p~~~~---------~~-------~~~~~~~~~~  233 (465)
                      .+++|++++++||.+++..+....  ...+.+.+..+.........+|..+.         ..       .+......++
T Consensus       164 ~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  243 (487)
T 3n9y_A          164 RFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKDHVAAWDVIFSKADIYTQN  243 (487)
T ss_dssp             HHHHHHHHHHHHSSCCCTTSSSCCHHHHHHHHHHHHHHHHHGGGTTSCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcccccccCCCCChHHHHHHHHHHHHHHHHHHHHhcCHHHHhhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999887654321  12234444333332221112222110         00       0111111111


Q ss_pred             HHHHhhhh----------------ccCCchHHHHHHHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhcc
Q 047842          234 KLSRAWKL----------------SIDSSTSFLRDTAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMH  297 (465)
Q Consensus       234 ~~~~~~~~----------------~~dl~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~  297 (465)
                      ..++....                -.+++++++.++++.+++||+|||+++++|++++|++||++|+|+++|++ .+.+.
T Consensus       244 ~~~~~~~~~~~~~~~~d~l~~ll~~~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~-~~~~~  322 (487)
T 3n9y_A          244 FYWELRQKGSVHHDYRGILYRLLGDSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVL-AARHQ  322 (487)
T ss_dssp             HHHHHHHHCCCCSSCCCHHHHHHHSCSSCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCHHHHHHHHHHHH-HHHHH
T ss_pred             HHHHHHhcCCcccchHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhChHHHHHHHHHHH-Hhhcc
Confidence            11110000                01478999999999999999999999999999999999999999999999 88764


Q ss_pred             ccccCcccccccChhhhccchhHHHHHhhhCCCCCCCcCcceeccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCC
Q 047842          298 KKEEDGERRFFFNTKQANNLVYLHAALCETLRLYPPVPYNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDC  377 (465)
Q Consensus       298 ~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p  377 (465)
                      .+        .++.+++++||||+|||+|+||++|+++...|.+.+ |+.++||.|||||.|+++.+++||||++| +||
T Consensus       323 ~~--------~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~R~~~~-d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~-~dp  392 (487)
T 3n9y_A          323 AQ--------GDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVN-DLVLRDYMIPAKTLVQVAIYALGREPTFF-FDP  392 (487)
T ss_dssp             TT--------TCHHHHTTSCHHHHHHHHHHHHHSCSSSEEEEECSS-CEEETTEEECTTCEEEEEHHHHHTCTTTS-SST
T ss_pred             cc--------cchhhhhhhCHHHHHHHHHHhhhCCcccccceeecC-ceeeCCEEECCCCEEEeCcHHhcCCcccC-CCc
Confidence            32        456899999999999999999999999875555555 66679999999999999999999999999 999


Q ss_pred             CCcCCCCCCCCCCcccccCCccccccCCCCCCCcChHHHHHHHHHHHHHHHhccEEEeecCCCccCcceEEeecCCCeeE
Q 047842          378 LEFKPERWISEKGCIVHVPTYKFTAFHAGPRNCLGKDKALIQMKMVASAVIGNYHVKVAKGHPVLPRKSIILNMKYGLKV  457 (465)
Q Consensus       378 ~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  457 (465)
                      ++|+||||+++++   +.....++|||.|+|.|+|++||++|++++++.|+++|+|++.++.++....++++.|+++++|
T Consensus       393 ~~F~PeR~l~~~~---~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~  469 (487)
T 3n9y_A          393 ENFDPTRWLSKDK---NITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQHLSDVGTTFNLILMPEKPISF  469 (487)
T ss_dssp             TSCCGGGGTCSCT---TSSTTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEECTTCCCCCEEESSSEEESSCCCE
T ss_pred             ccCChhhcCCCCC---CCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCEEEecCCcccccceeeeecCCCCcee
Confidence            9999999998642   2245679999999999999999999999999999999999998776666666788899999999


Q ss_pred             EEEecCC
Q 047842          458 QLSKRSL  464 (465)
Q Consensus       458 ~~~~r~~  464 (465)
                      ++++|+.
T Consensus       470 ~~~~r~~  476 (487)
T 3n9y_A          470 TFWPFNQ  476 (487)
T ss_dssp             EEEEC--
T ss_pred             EEEECCc
Confidence            9999963


No 7  
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=100.00  E-value=5.9e-69  Score=525.50  Aligned_cols=422  Identities=18%  Similarity=0.226  Sum_probs=313.3

Q ss_pred             hhcCCC---CCCCCCCcccchHHHhhcccchhHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCC
Q 047842           18 SWSDRN---SPMRNWPVLGMLPGLLANTWYFHEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYP   94 (465)
Q Consensus        18 ~~~~r~---Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~   94 (465)
                      +|.++.   |||+++|++||++.+.  ..+++.++. +++++||++|++   ++|+.++|+|+||+.+++++.++...|.
T Consensus         4 ~~~~~~~~pPgP~~~p~iG~~~~~~--~~~~~~~~~-~l~~~yG~v~~~---~~g~~~~v~v~~~~~i~~il~~~~~~f~   77 (476)
T 1po5_A            4 KTSSKGKLPPGPSPLPVLGNLLQMD--RKGLLRSFL-RLREKYGDVFTV---YLGSRPVVVLCGTDAIREALVDQAEAFS   77 (476)
T ss_dssp             -----CCCCCCSCCBTTTBTGGGCC--TTCHHHHHH-HHHHHHCSEEEE---EETTEEEEEECSHHHHHHHHTTTTTTTC
T ss_pred             cccCCCCCCcCCCCCCccccHHhcc--CCcHHHHHH-HHHHHhCCEEEE---EECCccEEEECCHHHHHHHHHhCcHhhC
Confidence            355543   8999999999999872  335788899 999999999999   8888899999999999999976556676


Q ss_pred             CCchhhhhhc-ccCCcccccCChhHHHHHHHhhhhcChh--HHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHHH
Q 047842           95 KGPDFRMIME-PLGDGVLNADGDLWKIQRKIIHSVMKHN--KFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVLK  171 (465)
Q Consensus        95 ~~~~~~~~~~-~~~~~l~~~~g~~w~~~R~~~~~~~~~~--~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~  171 (465)
                      +++....... ..+.+++.++|+.|+++|+++.+.|+..  ..+.+ .+.+.+++ +.+++.+.+  ..++++|+.+.+.
T Consensus        78 ~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~f~~~~~~~~~~-~~~i~~~~-~~l~~~l~~--~~~~~~d~~~~~~  153 (476)
T 1po5_A           78 GRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSV-EERIQEEA-RCLVEELRK--SKGALLDNTLLFH  153 (476)
T ss_dssp             EECCGGGGCSCCSSCCCCCSSHHHHHHHHHHHHHHHHHSCCCHHHH-HHHHHHHH-HHHHHHHHH--TTTCCBCCHHHHH
T ss_pred             CCCCcHHHHhhcCCCceEecCCcHHHHHHHHHHHHHHHhCCChhHH-HHHHHHHH-HHHHHHHHh--cCCCccCHHHHHH
Confidence            5443221221 2356788889999999999999999876  34555 67787776 666666654  2356799999999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCCCccchHHHHHHHHHHH------H---HH---hhhchhHHH-------HHHHHhhhchH
Q 047842          172 RFAFDNICMLVLGIDPNYLSVEFPQTVYANAFNTMEQA------L---LY---RHIVPKICW-------KLQKWLQIGEE  232 (465)
Q Consensus       172 ~~~~~i~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~------~---~~---~~~~p~~~~-------~~~~~~~~~~~  232 (465)
                      .+++|++++++||.+++..+.  ....+.+.+......      .   ..   ...+|....       .+..++....+
T Consensus       154 ~~~~~vi~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~lp~~~~~~~~~~~~~~~~~~~~i~  231 (476)
T 1po5_A          154 SITSNIICSIVFGKRFDYKDP--VFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHFPGTHRQIYRNLQEINTFIGQSVE  231 (476)
T ss_dssp             HHHHHHHHHHHHSSCCCTTCH--HHHHHHHHHHHHTTTCCTTHHHHHHHTHHHHHTSSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCCCCH--HHHHHHHHHHHHHhhhcchhhHHHHhhhHHHHhcCcHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999998764321  112222222221100      0   00   001111000       11111111111


Q ss_pred             HHHHH------------hhhh--------ccCCchHHHHHHHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 047842          233 KKLSR------------AWKL--------SIDSSTSFLRDTAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKA  292 (465)
Q Consensus       233 ~~~~~------------~~~~--------~~dl~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~  292 (465)
                      ++.+.            ....        -..++++++.++++.+++||+|||+++++|++++|++||++|+||++|++ 
T Consensus       232 ~r~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~-  310 (476)
T 1po5_A          232 KHRATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIE-  310 (476)
T ss_dssp             HHHTTCCTTSCCSHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH-
T ss_pred             HHHHhcCCCCcccHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhCHHHHHHHHHHHH-
Confidence            11110            0000        01257889999999999999999999999999999999999999999999 


Q ss_pred             hhhccccccCcccccccChhhhccchhHHHHHhhhCCCCCCCcCcceeccCccccCCCeeeCCCCEEEEeecccccCCCC
Q 047842          293 TIVMHKKEEDGERRFFFNTKQANNLVYLHAALCETLRLYPPVPYNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEI  372 (465)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~  372 (465)
                      .+.+.++        .++.+++++||||+|||+|+||++|+++...+|.+.+|+.++||.|||||.|+++.+++||||++
T Consensus       311 ~~~~~~~--------~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rdp~~  382 (476)
T 1po5_A          311 QVIGSHR--------PPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRY  382 (476)
T ss_dssp             HHTCSSS--------CCCGGGGGGCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEECHHHHHTCTTT
T ss_pred             HHhCCCC--------CCChHHHhcCcHHHHHHHHHHHhccCCCCCCccccCCCceecCEecCCCCEEEeehHhHhcCccc
Confidence            8876432        68999999999999999999999999996544444456667999999999999999999999999


Q ss_pred             cCCCCCCcCCCCCCCCCCcccccCCccccccCCCCCCCcChHHHHHHHHHHHHHHHhccEEEeecCCC---ccC-cceEE
Q 047842          373 WGNDCLEFKPERWISEKGCIVHVPTYKFTAFHAGPRNCLGKDKALIQMKMVASAVIGNYHVKVAKGHP---VLP-RKSII  448 (465)
Q Consensus       373 ~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~---~~~-~~~~~  448 (465)
                      | +||++|+||||+++++...  .+..++|||+|+|.|+|++||++|++++++.||++|+|++.++.+   ... ..+++
T Consensus       383 ~-~dp~~F~PeR~l~~~~~~~--~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~  459 (476)
T 1po5_A          383 F-ETPNTFNPGHFLDANGALK--RNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLTPRESGVG  459 (476)
T ss_dssp             C-SSTTSCCGGGGBCTTSCBC--CCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECSSCGGGCCCCCCSTTSS
T ss_pred             c-CCccccCchhhCCCCCCcc--CCccccCCCCccccCcchHHHHHHHHHHHHHHHhceEEeCCCCCCCCCccCCcCcee
Confidence            9 9999999999997643322  355799999999999999999999999999999999999987542   223 44566


Q ss_pred             eecCCCeeEEEEecCC
Q 047842          449 LNMKYGLKVQLSKRSL  464 (465)
Q Consensus       449 ~~~~~~~~~~~~~r~~  464 (465)
                      ..| .++.+++++|+.
T Consensus       460 ~~p-~~~~v~~~~R~~  474 (476)
T 1po5_A          460 NVP-PSYQIRFLARHH  474 (476)
T ss_dssp             CCC-CCCCBEEEECC-
T ss_pred             ecC-cceEEEEEecCC
Confidence            777 679999999964


No 8  
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=100.00  E-value=1.4e-68  Score=522.87  Aligned_cols=422  Identities=17%  Similarity=0.206  Sum_probs=315.7

Q ss_pred             hhcCCC---CCCCCCCcccchHHHhhcccchhHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCC
Q 047842           18 SWSDRN---SPMRNWPVLGMLPGLLANTWYFHEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYP   94 (465)
Q Consensus        18 ~~~~r~---Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~   94 (465)
                      +|++++   |||+++|++||++.+.  ..+++.++. +++++||++|++   ++|+.++|+|+||+.+++++.++...|+
T Consensus         4 ~~~~~~~~pPgP~~~p~iG~~~~~~--~~~~~~~~~-~l~~~yG~v~~~---~~~~~~~v~v~~~~~i~~il~~~~~~f~   77 (476)
T 2fdv_A            4 KTSSKGKLPPGPTPLPFIGNYLQLN--TEQMYNSLM-KISERYGPVFTI---HLGPRRVVVLCGHDAVREALVDQAEEFS   77 (476)
T ss_dssp             ----CCBCCCCCCCBTTTBTGGGCC--TTBHHHHHH-HHHHHHCSEEEE---EETTEEEEEECSHHHHHHHHTTTTTTTC
T ss_pred             cccccCCCCCCCCCCcccccHhhcC--CcchHHHHH-HHHHHhCCEEEE---EECCccEEEECCHHHHHHHHhcChHhhC
Confidence            455553   8999999999998772  235788899 999999999999   8888899999999999999976546676


Q ss_pred             CCchhhhhh-cccCCcccccCChhHHHHHHHhhhhcChhHH--HHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHHH
Q 047842           95 KGPDFRMIM-EPLGDGVLNADGDLWKIQRKIIHSVMKHNKF--ESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVLK  171 (465)
Q Consensus        95 ~~~~~~~~~-~~~~~~l~~~~g~~w~~~R~~~~~~~~~~~l--~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~  171 (465)
                      +++...... ...+.+++..+|+.|+++|+++.+.|+...+  +.+ .+.+.+.+ +.+++.+..  ..++++|+.+.+.
T Consensus        78 ~~~~~~~~~~~~~~~~l~~~~g~~~~~~Rr~~~~~f~~~~~~~~~~-~~~i~~~~-~~l~~~l~~--~~~~~vd~~~~~~  153 (476)
T 2fdv_A           78 GRGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGKRGI-EERIQEEA-GFLIDALRG--TGGANIDPTFFLS  153 (476)
T ss_dssp             EECCCHHHHHHHTTCSSSSCCHHHHHHHHHHHHHHHHHTTTTSHHH-HHHHHHHH-HHHHHHHHH--TTTCCBCCHHHHH
T ss_pred             CCCCcHHHhhhcCCCCeEecCchHHHHHHHHHHHHHHHhCCChhhH-HHHHHHHH-HHHHHHHHh--cCCCccChHHHHH
Confidence            543322111 1235678888999999999999999987665  555 77888886 666666654  2456799999999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCCCccchHHHHHHHHHHHHH---------Hh---hhchhHHHH-------HHHHhhhchH
Q 047842          172 RFAFDNICMLVLGIDPNYLSVEFPQTVYANAFNTMEQALL---------YR---HIVPKICWK-------LQKWLQIGEE  232 (465)
Q Consensus       172 ~~~~~i~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~---~~~p~~~~~-------~~~~~~~~~~  232 (465)
                      .++++++++++||.+++..+.  ....+.+.+..+.....         ..   ..+|.....       +.+++....+
T Consensus       154 ~~~~~vi~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~i~  231 (476)
T 2fdv_A          154 RTVSNVISSIVFGDRFDYKDK--EFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVE  231 (476)
T ss_dssp             HHHHHHHHHHHHSSCCCTTCH--HHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHTTSCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCcCCCCCH--HHHHHHHHHHHHHHhhcccccchhhhhhhHHHhcCcHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999998874321  12233333322221100         00   011211111       1111111111


Q ss_pred             HHHHH------------hhhh--------ccCCchHHHHHHHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 047842          233 KKLSR------------AWKL--------SIDSSTSFLRDTAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKA  292 (465)
Q Consensus       233 ~~~~~------------~~~~--------~~dl~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~  292 (465)
                      ++.+.            ....        -..++++++.++++.+++||+|||+++++|++++|++||++|+||++|++ 
T Consensus       232 ~r~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~-  310 (476)
T 2fdv_A          232 HNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEID-  310 (476)
T ss_dssp             HHHTTCCTTSCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH-
T ss_pred             HHHHhcCCCCCccHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHH-
Confidence            11110            0000        11378999999999999999999999999999999999999999999999 


Q ss_pred             hhhccccccCcccccccChhhhccchhHHHHHhhhCCCCCCCcCcceeccCccccCCCeeeCCCCEEEEeecccccCCCC
Q 047842          293 TIVMHKKEEDGERRFFFNTKQANNLVYLHAALCETLRLYPPVPYNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEI  372 (465)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~  372 (465)
                      .+.+.++        .++.+++.+||||+|||+|+||++|+++...+|.+.+|+.++||.|||||.|+++.+++||||++
T Consensus       311 ~~~~~~~--------~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~  382 (476)
T 2fdv_A          311 RVIGKNR--------QPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSF  382 (476)
T ss_dssp             HHTCSSS--------CCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECHHHHHTCTTT
T ss_pred             HhhcCCC--------CCChhhhhcChHHHHHHHHHHHhcCCcccCcceeccCCeeECCEeeCCCCEEEeehHHhhCChhh
Confidence            8876422        68999999999999999999999999995444444446677999999999999999999999999


Q ss_pred             cCCCCCCcCCCCCCCCCCcccccCCccccccCCCCCCCcChHHHHHHHHHHHHHHHhccEEEeecCCC---ccC-cceEE
Q 047842          373 WGNDCLEFKPERWISEKGCIVHVPTYKFTAFHAGPRNCLGKDKALIQMKMVASAVIGNYHVKVAKGHP---VLP-RKSII  448 (465)
Q Consensus       373 ~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~---~~~-~~~~~  448 (465)
                      | +||++|+||||+++++..  ..+..++|||+|+|.|+|++||++|++++++.|+++|++++.++.+   ... ..+++
T Consensus       383 ~-~dp~~F~PeR~l~~~~~~--~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~  459 (476)
T 2fdv_A          383 F-SNPQDFNPQHFLNEKGQF--KKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFA  459 (476)
T ss_dssp             C-SSTTSCCGGGGBCTTSCB--CCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCSCSEESSS
T ss_pred             c-CCccccCchhhCCCCCCC--CCCcCcccCCCCCCCCCChHHHHHHHHHHHHHHHhhcEEEcCCCCCCCCcccccccee
Confidence            9 999999999999764322  2356799999999999999999999999999999999999987642   223 44566


Q ss_pred             eecCCCeeEEEEecCC
Q 047842          449 LNMKYGLKVQLSKRSL  464 (465)
Q Consensus       449 ~~~~~~~~~~~~~r~~  464 (465)
                      ..| .++.+++++|+.
T Consensus       460 ~~p-~~~~v~~~~R~~  474 (476)
T 2fdv_A          460 TIP-RNYTMSFLPRHH  474 (476)
T ss_dssp             EEC-CCCCEEEEEC--
T ss_pred             ecC-CceEEEEEeccc
Confidence            777 579999999964


No 9  
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=100.00  E-value=3.2e-69  Score=532.38  Aligned_cols=419  Identities=18%  Similarity=0.275  Sum_probs=302.9

Q ss_pred             CCCCCCCcccchHHHhhcccchhHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCchhhhhh
Q 047842           24 SPMRNWPVLGMLPGLLANTWYFHEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPDFRMIM  103 (465)
Q Consensus        24 Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~~~~~  103 (465)
                      |||+++|++||++.+..   .++.++. +++++||++|++   ++|+.++|+|+||+.+++++.++...|++++......
T Consensus        12 PgP~~~P~iG~~~~~~~---~~~~~~~-~~~~~yG~i~~~---~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~   84 (507)
T 3pm0_A           12 PGPFAWPLIGNAAAVGQ---AAHLSFA-RLARRYGDVFQI---RLGSCPIVVLNGERAIHQALVQQGSAFADRPSFASFR   84 (507)
T ss_dssp             ----------------C---CHHHHHH-HHHHHHCSEEEE---EETTEEEEEECSHHHHHHHHTTTTTTSCBCCCCHHHH
T ss_pred             cCCCCCCeeCchhhcCc---cHHHHHH-HHHHHhCCEEEE---EECCccEEEECCHHHHHHHHHhCcHhhCCCCcchHHH
Confidence            89999999999998853   5788899 999999999999   9999999999999999999987767787665544333


Q ss_pred             -cccCCcc-cccCChhHHHHHHHhhhhcChhHHH-----HHHHHHHHHHHhhchhhhhhhhcccCccccHHHHHHHHHHH
Q 047842          104 -EPLGDGV-LNADGDLWKIQRKIIHSVMKHNKFE-----SALEKVAHQKMETGLIPVLDHASELGTVVDLQDVLKRFAFD  176 (465)
Q Consensus       104 -~~~~~~l-~~~~g~~w~~~R~~~~~~~~~~~l~-----~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~  176 (465)
                       ...+.++ +..+|+.|+++|+++++.|+.....     ..+.+.+.+++ +.+++.+.+...+++.+|+.+.+..+++|
T Consensus        85 ~~~~g~~l~~~~~g~~w~~~R~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~l~~~l~~~~~~~~~vd~~~~~~~~~~d  163 (507)
T 3pm0_A           85 VVSGGRSMAFGHYSEHWKVQRRAAHSMMRNFFTRQPRSRQVLEGHVLSEA-RELVALLVRGSADGAFLDPRPLTVVAVAN  163 (507)
T ss_dssp             HGGGGTCSSSSCSSHHHHHHHHHHHHHHHHSTTSSTTHHHHHHHHHHHHH-HHHHHHHHHTTGGGCCBCCHHHHHHHHHH
T ss_pred             hhcCCCceEECCCChHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHH-HHHHHHHHhhcccCCCcChHHHHHHHHHH
Confidence             2235666 4457999999999999876543322     22367777776 66677766554556789999999999999


Q ss_pred             HHHHHHhCCCCCCCCCCCccchHHHHHHHHHHHHHH---------hhhchhH----HHHH-------HHHhhhchHHHHH
Q 047842          177 NICMLVLGIDPNYLSVEFPQTVYANAFNTMEQALLY---------RHIVPKI----CWKL-------QKWLQIGEEKKLS  236 (465)
Q Consensus       177 i~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~p~~----~~~~-------~~~~~~~~~~~~~  236 (465)
                      +++.++||.+++..+.  ....+......+......         ...+|..    ...+       .+++.....++.+
T Consensus       164 vi~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  241 (507)
T 3pm0_A          164 VMSAVCFGCRYSHDDP--EFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKFLRHCE  241 (507)
T ss_dssp             HHHHHHTSCCCCTTCH--HHHHHTSCHHHHHHHHSTTCCTTTCGGGGGSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHccccCCCCCH--HHHHHHHHHHHHHHhcccchHHHHhHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999998865331  111122112222221110         0011111    1111       1111111111111


Q ss_pred             Hh----------------hh-h-cc-------CCchHHHHHHHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHH
Q 047842          237 RA----------------WK-L-SI-------DSSTSFLRDTAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIK  291 (465)
Q Consensus       237 ~~----------------~~-~-~~-------dl~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~  291 (465)
                      ..                .. . -.       .++++++.++++.+++||+|||+++++|++++|++||++|+||++|++
T Consensus       242 ~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~  321 (507)
T 3pm0_A          242 SLRPGAAPRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELD  321 (507)
T ss_dssp             HCCTTCCCCSHHHHHHHHHHHHHSCC----CCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred             ccccccCCccHHHHHHHHhhhhccccccCCCCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            00                00 0 00       278999999999999999999999999999999999999999999999


Q ss_pred             HhhhccccccCcccccccChhhhccchhHHHHHhhhCCCCCCCcCcceeccCccccCCCeeeCCCCEEEEeecccccCCC
Q 047842          292 ATIVMHKKEEDGERRFFFNTKQANNLVYLHAALCETLRLYPPVPYNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEE  371 (465)
Q Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~  371 (465)
                       .+.+..+        .++.+++.+||||+|||+|+||++|+++...+|.+.+|+.++||.|||||.|+++.+++||||+
T Consensus       322 -~~~~~~~--------~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~  392 (507)
T 3pm0_A          322 -QVVGRDR--------LPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPL  392 (507)
T ss_dssp             -HHTCTTS--------CCCGGGGGGCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBSHHHHSCTT
T ss_pred             -HhcCCCC--------CCChhhcccChHHHHHHHHHHhcCCCcccCCCccccCCceEcCEEECCCCEEEeChHHHhCCcc
Confidence             8875432        7899999999999999999999999999866666666777799999999999999999999999


Q ss_pred             CcCCCCCCcCCCCCCCCCCcccccCCccccccCCCCCCCcChHHHHHHHHHHHHHHHhccEEEeecCCCccC--cceEEe
Q 047842          372 IWGNDCLEFKPERWISEKGCIVHVPTYKFTAFHAGPRNCLGKDKALIQMKMVASAVIGNYHVKVAKGHPVLP--RKSIIL  449 (465)
Q Consensus       372 ~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~--~~~~~~  449 (465)
                      +| +||++|+||||+++++...+..+..++|||+|+|.|||++||.+|++++++.||++|+|++.++.+...  ..+.+.
T Consensus       393 ~~-~dp~~F~PeRfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~  471 (507)
T 3pm0_A          393 KW-PNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEPAKMNFSYGLTI  471 (507)
T ss_dssp             TC-SSSSSCCGGGGBCTTSCBCHHHHTTCCSSCCSTTCCSCHHHHHHHHHHHHHHHHHHEEEEECTTCCSCCCEEESSSE
T ss_pred             cC-CCcCccCCCcccCCCCcccCCCcccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHeEEecCCCCCCCCCCCCCccc
Confidence            99 999999999999876432222235799999999999999999999999999999999999987655433  234556


Q ss_pred             ecCCCeeEEEEecC
Q 047842          450 NMKYGLKVQLSKRS  463 (465)
Q Consensus       450 ~~~~~~~~~~~~r~  463 (465)
                      .|. +++|++++|+
T Consensus       472 ~p~-~~~v~~~~R~  484 (507)
T 3pm0_A          472 KPK-SFKVNVTLRE  484 (507)
T ss_dssp             EEC-SCCEEEEESS
T ss_pred             cCC-CcEEEEEEcc
Confidence            665 5899999996


No 10 
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=100.00  E-value=1.9e-68  Score=522.70  Aligned_cols=416  Identities=17%  Similarity=0.203  Sum_probs=313.8

Q ss_pred             CCCCCCCcccchHHHhhcccchhHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCchhhhhh
Q 047842           24 SPMRNWPVLGMLPGLLANTWYFHEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPDFRMIM  103 (465)
Q Consensus        24 Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~~~~~  103 (465)
                      |||+++|++||++++.  ..+++.++. +|++|||++|++   ++|+.++|+|+||+.+++++.++...|++++......
T Consensus        13 PgP~~~PliG~~~~~~--~~~~~~~~~-~~~~~yG~v~~~---~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~~~~~~   86 (476)
T 3e6i_A           13 PGPFPLPIIGNLFQLE--LKNIPKSFT-RLAQRFGPVFTL---YVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPAFH   86 (476)
T ss_dssp             CCCCCBTTTBTGGGCC--TTCHHHHHH-HHHHHHCSEEEE---EETTEEEEEECSHHHHHHHHHTSTTTTCEECCCGGGG
T ss_pred             cCCCCcccccChhhhc--cccHhHHHH-HHHHHhCCEEEE---EECCccEEEECCHHHHHHHHhcchHhhCCCCCCchhh
Confidence            8999999999999873  235788899 999999999999   9999999999999999999998766777665444333


Q ss_pred             cccCCcccccCChhHHHHHHHhhhhcChhHH--HHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHHHHHHHHHHHHH
Q 047842          104 EPLGDGVLNADGDLWKIQRKIIHSVMKHNKF--ESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVLKRFAFDNICML  181 (465)
Q Consensus       104 ~~~~~~l~~~~g~~w~~~R~~~~~~~~~~~l--~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~i~~~~  181 (465)
                      ...+.+++..+|+.|+++|+++.+.|+...+  ..+ ++.+.+.+ +.+++.+.+  ..++++|+.+.+..+++|+++++
T Consensus        87 ~~~~~~l~~~~g~~w~~~Rr~~~~~l~~~~~~~~~~-~~~i~~~~-~~l~~~l~~--~~~~~~d~~~~~~~~~~dvi~~~  162 (476)
T 3e6i_A           87 AHRDRGIIFNNGPTWKDIRRFSLTTLRNYGMGKQGN-ESRIQREA-HFLLEALRK--TQGQPFDPTFLIGCAPCNVIADI  162 (476)
T ss_dssp             GGTTSSSTTCCSTTHHHHHHHHHHHHHHTC-CCSHH-HHHHHHHH-HHHHHHHHT--TTTSCBCTHHHHTHHHHHHHHHH
T ss_pred             eecCCCEEecCCcHHHHHHHHHHHHHHhcCCCchHH-HHHHHHHH-HHHHHHHHH--hCCCCcChHHHHHHHHHHHHHHH
Confidence            3334489999999999999998888765433  223 56666665 666666654  34668999999999999999999


Q ss_pred             HhCCCCCCCCCCCccchHHHHHHHHHHHHH------------HhhhchhHHHH-------HHHHhhhchHHHHHH-----
Q 047842          182 VLGIDPNYLSVEFPQTVYANAFNTMEQALL------------YRHIVPKICWK-------LQKWLQIGEEKKLSR-----  237 (465)
Q Consensus       182 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~p~~~~~-------~~~~~~~~~~~~~~~-----  237 (465)
                      +||.+++..+.  ....+...+........            ....+|.....       +.+++....+++.+.     
T Consensus       163 ~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~lp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  240 (476)
T 3e6i_A          163 LFRKHFDYNDE--KFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLPGSHRKVIKNVAEVKEYVSERVKEHHQSLDPNC  240 (476)
T ss_dssp             HHSCCCCTTCH--HHHHHHHHHHHHHHHTTSHHHHHHHHSHHHHTTSCSHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTS
T ss_pred             HcCCCCCCCCH--HHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Confidence            99998876432  11222222222221100            00011111111       111111111111110     


Q ss_pred             -------hhhh--------ccCCchHHHHHHHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccC
Q 047842          238 -------AWKL--------SIDSSTSFLRDTAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEED  302 (465)
Q Consensus       238 -------~~~~--------~~dl~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~  302 (465)
                             ....        -..++++++.++++.+++||+|||+++++|++++|++||++|+|+++|++ .+.+...   
T Consensus       241 ~~d~~~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~-~~~~~~~---  316 (476)
T 3e6i_A          241 PRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEID-RVIGPSR---  316 (476)
T ss_dssp             CCSHHHHHHHHHHSSSSCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH-HHTTTTS---
T ss_pred             CccHHHHHHHHHHhcccCCCCCcCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhcCHHHHHHHHHHHH-HhcCCCC---
Confidence                   0000        01268999999999999999999999999999999999999999999999 8876432   


Q ss_pred             cccccccChhhhccchhHHHHHhhhCCCCCCCcCcceeccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCC
Q 047842          303 GERRFFFNTKQANNLVYLHAALCETLRLYPPVPYNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKP  382 (465)
Q Consensus       303 ~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P  382 (465)
                           .++.+++++||||+|||+|+||++|+++...+|.+.+|+.++||.|||||.|+++.+++||||++| +||++|+|
T Consensus       317 -----~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~-~~p~~F~P  390 (476)
T 3e6i_A          317 -----IPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEF-PDPEKFKP  390 (476)
T ss_dssp             -----CCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTS-SSTTSCCG
T ss_pred             -----CCChhhccCCchHHHHHHHHHHhccCCCccccccCCCCeeEcCEEeCCCCEEEechHHhhCCcccC-CCccccCc
Confidence                 689999999999999999999999999975555555567779999999999999999999999999 99999999


Q ss_pred             CCCCCCCCcccccCCccccccCCCCCCCcChHHHHHHHHHHHHHHHhccEEEeec-CCCcc--Cc-ceEEeecCCCeeEE
Q 047842          383 ERWISEKGCIVHVPTYKFTAFHAGPRNCLGKDKALIQMKMVASAVIGNYHVKVAK-GHPVL--PR-KSIILNMKYGLKVQ  458 (465)
Q Consensus       383 ~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~-~~~~~--~~-~~~~~~~~~~~~~~  458 (465)
                      |||+++++..  ..+..++|||+|+|.|+|++||++|++++++.|+++|+|++.. +.+..  .. .+++..| .+++|+
T Consensus       391 eR~l~~~~~~--~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~  467 (476)
T 3e6i_A          391 EHFLNENGKF--KYSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDPKDIDLSPIHIGFGCIP-PRYKLC  467 (476)
T ss_dssp             GGGBCTTSSB--CCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCTTTCCCSCSEESSSEEC-CCCCEE
T ss_pred             hhhcCCCCCc--cCccceecCCCCCccCccHHHHHHHHHHHHHHHHHhcEeecCCCCCCCCCCcccCccccCC-CCeEEE
Confidence            9999875432  2456799999999999999999999999999999999999853 33332  22 3445556 469999


Q ss_pred             EEecCC
Q 047842          459 LSKRSL  464 (465)
Q Consensus       459 ~~~r~~  464 (465)
                      +++|+.
T Consensus       468 ~~~R~~  473 (476)
T 3e6i_A          468 VIPRSH  473 (476)
T ss_dssp             EEECC-
T ss_pred             EEeccc
Confidence            999974


No 11 
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=100.00  E-value=7.8e-69  Score=527.47  Aligned_cols=418  Identities=20%  Similarity=0.276  Sum_probs=315.3

Q ss_pred             CCCCCCCcccchHHHhhcccchhHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCchhhhhh
Q 047842           24 SPMRNWPVLGMLPGLLANTWYFHEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPDFRMIM  103 (465)
Q Consensus        24 Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~~~~~  103 (465)
                      |||+++|++||++++.. ...++..+. +|+++||++|.+   ++|+.++|+|+||+.+++++.++...|..++......
T Consensus        11 PgP~~lPliGnl~~l~~-~~~~~~~~~-~~~~kYG~i~~~---~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~~~   85 (494)
T 3swz_A           11 KSLLSLPLVGSLPFLPR-HGHMHNNFF-KLQKKYGPIYSV---RMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMATLD   85 (494)
T ss_dssp             -CCBCCCEEEEESSCTT-SSCHHHHHH-HTHHHHCSEEEE---EETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHHHH
T ss_pred             CCCCCCCeEcchHHhCC-CCchhHHHH-HHHHHcCCEEEE---EeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHHHH
Confidence            89999999999997743 234778888 999999999999   9999999999999999999998877787666543222


Q ss_pred             --cccCCccccc-CChhHHHHHHHhhhhcCh--hHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHHHHHHHHHH
Q 047842          104 --EPLGDGVLNA-DGDLWKIQRKIIHSVMKH--NKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVLKRFAFDNI  178 (465)
Q Consensus       104 --~~~~~~l~~~-~g~~w~~~R~~~~~~~~~--~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~i~  178 (465)
                        ...+.|++.. +|++|+++|+++.+.|+.  .....+ .+.+.+++ +.+++.+.+  ..++++|+...+..+++|++
T Consensus        86 ~~~~~~~gl~~~~~g~~wr~~Rr~~~~~f~~~~~~~~~~-~~~i~~~~-~~l~~~l~~--~~~~~vd~~~~~~~~t~dvi  161 (494)
T 3swz_A           86 IASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGDQKL-EKIICQEI-STLCDMLAT--HNGQSIDISFPVFVAVTNVI  161 (494)
T ss_dssp             HHTTTTCSSSSSCSSHHHHHHHHHHHHHTTTTSSSTTCH-HHHHHHHH-HHHHHHHHH--TTTEEECCHHHHHHHHHHHH
T ss_pred             HhccCCCCeEeCCCCHHHHHHHHHHHHHHHHhcchHHHH-HHHHHHHH-HHHHHHHHH--cCCCcccHHHHHHHHHHHHH
Confidence              2224566655 599999999999999874  334455 67777776 667777654  35678999999999999999


Q ss_pred             HHHHhCCCCCCCCCCCccchHHHHHHHHHHHHHH---------hhhchhH-HHHHH---HHhhhchHHHHHHhh------
Q 047842          179 CMLVLGIDPNYLSVEFPQTVYANAFNTMEQALLY---------RHIVPKI-CWKLQ---KWLQIGEEKKLSRAW------  239 (465)
Q Consensus       179 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~p~~-~~~~~---~~~~~~~~~~~~~~~------  239 (465)
                      +.++||.+++..+.  ....+......+......         ...+|.. ...+.   +.......+.+++..      
T Consensus       162 ~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  239 (494)
T 3swz_A          162 SLICFNTSYKNGDP--ELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPNKTLEKLKSHVKIRNDLLNKILENYKEKFRSD  239 (494)
T ss_dssp             HHHHHSCCCCTTCT--HHHHHHHHHHHHHHHHCSSSSCCSSCGGGTSCCSHHHHHHHHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred             HHHHcCCcCCCCCH--HHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence            99999998764321  111222222222222110         0011211 11111   111000111111100      


Q ss_pred             ----------h--------------hccCCchHHHHHHHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhh
Q 047842          240 ----------K--------------LSIDSSTSFLRDTAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIV  295 (465)
Q Consensus       240 ----------~--------------~~~dl~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~  295 (465)
                                +              ....++++++..++.++++||+|||+++++|++++|++||++|+|+++|++ .+.
T Consensus       240 ~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~-~v~  318 (494)
T 3swz_A          240 SITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEID-QNV  318 (494)
T ss_dssp             CCCSHHHHHHHHHHTSCCC----CCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH-HHT
T ss_pred             chhHHHHHHHHHHHhhhcccccccccccccCHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhCHHHHHHHHHHHH-Hhc
Confidence                      0              001267889999999999999999999999999999999999999999999 887


Q ss_pred             ccccccCcccccccChhhhccchhHHHHHhhhCCCCCCCcCcceeccCccccCCCeeeCCCCEEEEeecccccCCCCcCC
Q 047842          296 MHKKEEDGERRFFFNTKQANNLVYLHAALCETLRLYPPVPYNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGN  375 (465)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~  375 (465)
                      +..+        .++.+++.+||||+|||+|+||++|+++...+|.+.+|+.++||.|||||.|+++.+++||||++| +
T Consensus       319 ~~~~--------~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~-~  389 (494)
T 3swz_A          319 GFSR--------TPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEW-H  389 (494)
T ss_dssp             CSSS--------CCCGGGGGTCHHHHHHHHHHHHHSCSSTTCSCEECSSSEEETTEEECTTCEEEECHHHHHHCTTTS-S
T ss_pred             CCCC--------CCCHHHHhcCHHHHHHHHHHHHhcCCcccccceecCCCceECCEEeCCCCEEEEehHHhhCCcccC-C
Confidence            6532        789999999999999999999999999987666665566779999999999999999999999999 9


Q ss_pred             CCCCcCCCCCCCCCCcccccCCccccccCCCCCCCcChHHHHHHHHHHHHHHHhccEEEeecCCCc---cCcceEEeecC
Q 047842          376 DCLEFKPERWISEKGCIVHVPTYKFTAFHAGPRNCLGKDKALIQMKMVASAVIGNYHVKVAKGHPV---LPRKSIILNMK  452 (465)
Q Consensus       376 ~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~---~~~~~~~~~~~  452 (465)
                      ||++|+||||+++++.........++|||+|+|.|||++||++|++++++.||++|+|+++++.+.   ....+.+..| 
T Consensus       390 dp~~F~PeRfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p-  468 (494)
T 3swz_A          390 QPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLEGIPKVVFLI-  468 (494)
T ss_dssp             STTSCCGGGGBCTTSSSBCCCCSCCCTTCCGGGSCSCHHHHHHHHHHHHHHHHHHEEEECCSSCCCCCCSCEESSSEEC-
T ss_pred             CcccCCcccccCCCCccccCCCCcccCCCCCCCCCCcHHHHHHHHHHHHHHHHHhcEEeeCCCCCCCCCCCccceeecC-
Confidence            999999999998764333334568999999999999999999999999999999999999864332   2233445555 


Q ss_pred             CCeeEEEEecC
Q 047842          453 YGLKVQLSKRS  463 (465)
Q Consensus       453 ~~~~~~~~~r~  463 (465)
                      .+++|++++|+
T Consensus       469 ~~~~v~~~~R~  479 (494)
T 3swz_A          469 DSFKVKIKVRQ  479 (494)
T ss_dssp             CCCCEEEEECH
T ss_pred             CCcEEEEEEcC
Confidence            57999999995


No 12 
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=100.00  E-value=9.1e-69  Score=524.50  Aligned_cols=422  Identities=18%  Similarity=0.220  Sum_probs=309.4

Q ss_pred             hhcCCC---CCCCCCCcccchHHHhhcccchhHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCC
Q 047842           18 SWSDRN---SPMRNWPVLGMLPGLLANTWYFHEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYP   94 (465)
Q Consensus        18 ~~~~r~---Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~   94 (465)
                      .|++++   |||+++|++||++++.  ..+++.++. +++++||++|++   ++|+.++|+|+||+.+++++.++...|.
T Consensus         5 ~~~~~~~~pPgP~~~p~iG~~~~~~--~~~~~~~~~-~l~~~yG~v~~~---~~g~~~~v~v~~~~~~~~il~~~~~~f~   78 (477)
T 1r9o_A            5 TSSGRGKLPPGPTPLPVIGNILQIG--IKDISKSLT-NLSKVYGPVFTL---YFGLKPIVVLHGYEAVKEALIDLGEEFS   78 (477)
T ss_dssp             ----CCBCCCCSSSCC-----CCBC--HHHHHHHHH-HHHHHHCSEEEE---ESSSCEEEEECSHHHHHHHHTTTTTTTC
T ss_pred             cccCCCCCCCCCCCCceeccHhhcC--CCChHHHHH-HHHHHhCCEEEE---EECCCcEEEECCHHHHHHHHhcccHhhC
Confidence            566663   8999999999998762  234778899 999999999999   8888899999999999999976546676


Q ss_pred             CCchhhhhh-cccCCcccccCChhHHHHHHHhhhhcChh--HHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHHH
Q 047842           95 KGPDFRMIM-EPLGDGVLNADGDLWKIQRKIIHSVMKHN--KFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVLK  171 (465)
Q Consensus        95 ~~~~~~~~~-~~~~~~l~~~~g~~w~~~R~~~~~~~~~~--~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~  171 (465)
                      +++...... ...+.+++.++|+.|+++|+++.+.|+..  ..+.+ .+.+.+++ +.+++.+.+  ..++++|+.+.+.
T Consensus        79 ~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~~~~~~~~~~~-~~~i~~~~-~~l~~~l~~--~~~~~vd~~~~~~  154 (477)
T 1r9o_A           79 GRGIFPLAERANRGFGIVFSNGKKWKEIRRFSLMTLRNFGMGKRSI-EDRVQEEA-RCLVEELRK--TKASPCDPTFILG  154 (477)
T ss_dssp             EECCCSCCCTTTCTTSSTTCCHHHHHHHHHHHHHHHTTSSSCSSCH-HHHHHHHH-HHHHHHHHT--TTTSCBCTHHHHH
T ss_pred             CCCcchhhhhccCCCceEecCChHHHHHHHHHHHHHHHhCCChHHH-HHHHHHHH-HHHHHHHHh--cCCCccChHHHHH
Confidence            543321111 12356788889999999999999999876  33444 66777776 666666654  2356799999999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCCCccchHHHHHHHHHHHHH---------Hh---hhchhHHH-------HHHHHhhhchH
Q 047842          172 RFAFDNICMLVLGIDPNYLSVEFPQTVYANAFNTMEQALL---------YR---HIVPKICW-------KLQKWLQIGEE  232 (465)
Q Consensus       172 ~~~~~i~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~---~~~p~~~~-------~~~~~~~~~~~  232 (465)
                      .+++|++++++||.+++..+.  ....+.+.+........         ..   ..+|....       .+..++....+
T Consensus       155 ~~~~~vi~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~lp~~~~~~~~~~~~~~~~~~~~i~  232 (477)
T 1r9o_A          155 CAPCNVICSIIFHKRFDYKDQ--QFLNLMEKLNENIKILSSPWIQICNNFSPIIDYFPGTHNKLLKNVAFMKSYILEKVK  232 (477)
T ss_dssp             HHHHHHHHHHHHSCCCCTTCH--HHHHHHHHHHHHHHHHTCCBC-------CCCSCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHccCcCCCCCH--HHHHHHHHHHHHHHhhccchhHHHhhccHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999998764321  12223222222221110         00   01121111       11112211111


Q ss_pred             HHHH----------------Hhhhh----ccCCchHHHHHHHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 047842          233 KKLS----------------RAWKL----SIDSSTSFLRDTAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKA  292 (465)
Q Consensus       233 ~~~~----------------~~~~~----~~dl~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~  292 (465)
                      ++.+                .....    -..++++++.++++.+++||+|||+++++|++++|++||++|+||++|++ 
T Consensus       233 ~r~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~-  311 (477)
T 1r9o_A          233 EHQESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIE-  311 (477)
T ss_dssp             HHHHTCCTTCCCSHHHHHHHHHHHHTTSCSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH-
T ss_pred             HHHhccCCCCchHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHHhCHHHHHHHHHHHH-
Confidence            1111                00000    11378999999999999999999999999999999999999999999999 


Q ss_pred             hhhccccccCcccccccChhhhccchhHHHHHhhhCCCCCCCcCcceeccCccccCCCeeeCCCCEEEEeecccccCCCC
Q 047842          293 TIVMHKKEEDGERRFFFNTKQANNLVYLHAALCETLRLYPPVPYNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEI  372 (465)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~  372 (465)
                      .+.+.++        .++.+++++||||+|||+|+||++|+++...+|.+.+|+.++||.|||||.|+++.+++||||++
T Consensus       312 ~~~~~~~--------~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~  383 (477)
T 1r9o_A          312 RVIGRNR--------SPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKE  383 (477)
T ss_dssp             HHTCSSS--------CCCGGGGGGCHHHHHHHHHHHHHHTSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTT
T ss_pred             HhcCCCC--------CCChHhhccCcHHHHHHHHHHHhcCCCCCCCceeccCCccccceecCCCCEEEEecHHhhCCccc
Confidence            8876432        68899999999999999999999999996544444456777999999999999999999999999


Q ss_pred             cCCCCCCcCCCCCCCCCCcccccCCccccccCCCCCCCcChHHHHHHHHHHHHHHHhccEEEeecCCC---ccC-cceEE
Q 047842          373 WGNDCLEFKPERWISEKGCIVHVPTYKFTAFHAGPRNCLGKDKALIQMKMVASAVIGNYHVKVAKGHP---VLP-RKSII  448 (465)
Q Consensus       373 ~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~---~~~-~~~~~  448 (465)
                      | +||++|+||||+++++...  ....++|||+|+|.|+|++||++|++++++.||++|+|++.++.+   ... ..+++
T Consensus       384 ~-~dP~~F~PeR~l~~~~~~~--~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~  460 (477)
T 1r9o_A          384 F-PNPEMFDPHHFLDEGGNFK--KSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKNLDTTPVVNGFA  460 (477)
T ss_dssp             S-SSTTSCCGGGGBCTTSCBC--CCTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCCCBCCSSS
T ss_pred             C-CCccccCccceECCCCCcC--ccccccCCCCccCCCCCHHHHHHHHHHHHHHHHHhcEEecCCCCCCCCccCCcCcee
Confidence            9 9999999999997643222  355799999999999999999999999999999999999986542   222 44556


Q ss_pred             eecCCCeeEEEEecCC
Q 047842          449 LNMKYGLKVQLSKRSL  464 (465)
Q Consensus       449 ~~~~~~~~~~~~~r~~  464 (465)
                      ..| .++.+++++|+.
T Consensus       461 ~~p-~~~~~~~~~R~~  475 (477)
T 1r9o_A          461 SVP-PFYQLCFIPIHH  475 (477)
T ss_dssp             CBC-CCCCEEEEECCC
T ss_pred             ecC-CCeEEEEEEecc
Confidence            677 579999999964


No 13 
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=100.00  E-value=8.7e-68  Score=512.15  Aligned_cols=406  Identities=21%  Similarity=0.251  Sum_probs=311.9

Q ss_pred             CCCCCCCcccchHHHhhcccchhHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCchhhhhh
Q 047842           24 SPMRNWPVLGMLPGLLANTWYFHEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPDFRMIM  103 (465)
Q Consensus        24 Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~~~~~  103 (465)
                      |||+++|++||++.+..+   .+ ++. +++++||++|++   ++++.++|+|+||+.+++++.++...|... ......
T Consensus        15 Pgp~~~P~iG~~~~~~~~---~~-~~~-~~~~~yg~v~~~---~~~g~~~vvv~~~~~~~~il~~~~~~~~~~-~~~~~~   85 (444)
T 2ve3_A           15 PGDFGLPWLGETLNFLND---GD-FGK-KRQQQFGPIFKT---RLFGKNVIFISGALANRFLFTKEQETFQAT-WPLSTR   85 (444)
T ss_dssp             CCCCCBTTTBTHHHHHHC---TT-HHH-HHHHHHCSSEEE---EETTEEEEEECSHHHHHHHTSSCTTTEEEE-CCHHHH
T ss_pred             CCCCCCCccccHHHHhcC---cH-HHH-HHHHHcCCeEEE---eeCCCCEEEEcCHHHHHHHHhCCCcccccc-hhHHHH
Confidence            899999999999988654   45 787 899999999999   767788999999999999998763445421 111112


Q ss_pred             cccCC-cccccCChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHHHHHHHHHHHHHH
Q 047842          104 EPLGD-GVLNADGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVLKRFAFDNICMLV  182 (465)
Q Consensus       104 ~~~~~-~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~i~~~~~  182 (465)
                      ...|. +++..+|+.|+++|+++.+.|+...++.+ .+.+++.+ +.+++.+.    .++++|+.+.+..++++++++++
T Consensus        86 ~~~g~~~l~~~~g~~~~~~R~~~~~~f~~~~l~~~-~~~i~~~~-~~l~~~l~----~~~~vd~~~~~~~~~~~vi~~~~  159 (444)
T 2ve3_A           86 ILLGPNALATQMGEIHRSRRKILYQAFLPRTLDSY-LPKMDGIV-QGYLEQWG----KANEVIWYPQLRRMTFDVAATLF  159 (444)
T ss_dssp             HHHCTTSGGGCCHHHHHHHHHHHHGGGCHHHHHTT-HHHHHHHH-HHHHHHHH----HSSEEEHHHHHHHHHHHHHHHHH
T ss_pred             HHhCccccccCCchHHHHHHHHHHhhcCHHHHHHH-HHHHHHHH-HHHHHHhc----CCCcEeHHHHHHHHHHHHHHHHH
Confidence            23354 78889999999999999999999999888 68888887 66655553    34679999999999999999999


Q ss_pred             hCCCCCCCCCCCccchHHHHHHHHHHHHHH-hhhchhH-HH-------HHHHHhhhchHHHHHH----------hhhh--
Q 047842          183 LGIDPNYLSVEFPQTVYANAFNTMEQALLY-RHIVPKI-CW-------KLQKWLQIGEEKKLSR----------AWKL--  241 (465)
Q Consensus       183 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~-~~-------~~~~~~~~~~~~~~~~----------~~~~--  241 (465)
                      || +....+     ..+.+.+..+...... ....|.. ..       .+.+++....+++.+.          ....  
T Consensus       160 fG-~~~~~~-----~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~d~l~~ll~~~~  233 (444)
T 2ve3_A          160 MG-EKVSQN-----PQLFPWFETYIQGLFSLPIPLPNTLFGKSQRARALLLAELEKIIKARQQQPPSEEDALGILLAARD  233 (444)
T ss_dssp             TC-HHHHSC-----TTHHHHHHHHHHHHSSCCCCSTTSHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCSSHHHHHHHCBC
T ss_pred             cC-CCcccH-----HHHHHHHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHhccc
Confidence            99 322111     2333433333222110 1111211 00       1111111111111110          0000  


Q ss_pred             --ccCCchHHHHHHHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchh
Q 047842          242 --SIDSSTSFLRDTAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVY  319 (465)
Q Consensus       242 --~~dl~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  319 (465)
                        -..++++++.++++.+++||+|||+++++|++++|++||++|+||++|++ .+.+..         .++.+++.+|||
T Consensus       234 ~~~~~l~~~~i~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~-~~~~~~---------~~~~~~l~~lpy  303 (444)
T 2ve3_A          234 DNNQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQN-KLQLSQ---------ELTAETLKKMPY  303 (444)
T ss_dssp             TTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH-SSCCSS---------CCCHHHHTTCHH
T ss_pred             cCCCCCCHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHCHHHHHHHHHHHH-HhccCC---------CCChhhhhcChH
Confidence              01368999999999999999999999999999999999999999999999 876532         689999999999


Q ss_pred             HHHHHhhhCCCCCCCcCcceeccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCcc
Q 047842          320 LHAALCETLRLYPPVPYNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYK  399 (465)
Q Consensus       320 l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~  399 (465)
                      |+|||+|+||++|+++...|.+.+ |+.++||.|||||.|+++.+++||||++| +||++|+||||++++.. .+..+..
T Consensus       304 l~a~i~E~lRl~p~~~~~~R~~~~-d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~l~~~~~-~~~~~~~  380 (444)
T 2ve3_A          304 LDQVLQEVLRLIPPVGGGFRELIQ-DCQFQGFHFPKGWLVSYQISQTHADPDLY-PDPEKFDPERFTPDGSA-THNPPFA  380 (444)
T ss_dssp             HHHHHHHHHHHSCSSCEEEEEESS-CEEETTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCGGGSSTTSTT-TTSCTTS
T ss_pred             HHHHHHHHHhcCCCccCccceeCC-CeeECCEEECCCCEEEechHHhcCChhhc-CCcCccCccccCCCCcc-cCCCCce
Confidence            999999999999999987666655 56669999999999999999999999999 99999999999975421 1234567


Q ss_pred             ccccCCCCCCCcChHHHHHHHHHHHHHHHhccEEEeecCCCccCcceEEeecCCCeeEEEEecC
Q 047842          400 FTAFHAGPRNCLGKDKALIQMKMVASAVIGNYHVKVAKGHPVLPRKSIILNMKYGLKVQLSKRS  463 (465)
Q Consensus       400 ~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  463 (465)
                      ++|||+|+|.|+|++||++|++++++.|+++|++++.++.+.......+..|.++++|++++|+
T Consensus       381 ~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~r~  444 (444)
T 2ve3_A          381 HVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQNLELVVTPSPRPKDNLRVKLHSLM  444 (444)
T ss_dssp             CCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEEECSSCCCCEEESSSEEETTCCEEEEEEC-
T ss_pred             eeCCCCCCccCccHHHHHHHHHHHHHHHHHhCEEEeCCCCCcceeccccccCCCCceEEEEeCC
Confidence            9999999999999999999999999999999999998765555555567789899999999984


No 14 
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=100.00  E-value=1.7e-68  Score=524.54  Aligned_cols=418  Identities=18%  Similarity=0.257  Sum_probs=309.5

Q ss_pred             CCCCCCCcccchHHHhhcccchhHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCchhhhhh
Q 047842           24 SPMRNWPVLGMLPGLLANTWYFHEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPDFRMIM  103 (465)
Q Consensus        24 Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~~~~~  103 (465)
                      |||+++|++||++.+..   +++..+. +++++||++|++   ++|+.++|+++||+.+++++.++...|++++.+....
T Consensus        19 PgP~~~p~~G~~~~~~~---~~~~~~~-~l~~~yG~v~~~---~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~~~~~~   91 (495)
T 2hi4_A           19 PEPWGWPLLGHVLTLGK---NPHLALS-RMSQRYGDVLQI---RIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTST   91 (495)
T ss_dssp             CCCCCBTTTBTHHHHTT---CHHHHHH-HHHHHHCSEEEE---EETTEEEEEECSHHHHHHHHTTTGGGSCBCCCCHHHH
T ss_pred             CCCCCCcceeeHHhcCc---cHHHHHH-HHHHHhCCEEEE---EECCccEEEECCHHHHHHHHHhcchhhCCCCCcHHHH
Confidence            89999999999998743   4778888 999999999998   8899999999999999999987655676554333222


Q ss_pred             cc-cCCccccc--CChhHHHHHHHhhhhcChhH---H---H---HHHHHHHHHHHhhchhhhhhhhcccCccccHHHHHH
Q 047842          104 EP-LGDGVLNA--DGDLWKIQRKIIHSVMKHNK---F---E---SALEKVAHQKMETGLIPVLDHASELGTVVDLQDVLK  171 (465)
Q Consensus       104 ~~-~~~~l~~~--~g~~w~~~R~~~~~~~~~~~---l---~---~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~  171 (465)
                      .. .+.+++.+  +|+.|+++|+++++.|+..+   .   .   .+ ++.+.+.+ +.+++.+.+...+++++|+.+.+.
T Consensus        92 ~~~~~~~l~~~~~~g~~w~~~Rr~~~~~f~~~s~~~~~~~~~~~~~-~~~i~~~~-~~l~~~l~~~~~~~~~~d~~~~~~  169 (495)
T 2hi4_A           92 LITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPASSSSCYL-EEHVSKEA-KALISRLQELMAGPGHFDPYNQVV  169 (495)
T ss_dssp             TSTTSCCTTTSSCCSHHHHHHHHHHHHHHHHTTTSBCSSCSSCBHH-HHHHHHHH-HHHHHHHHHHHHTTSCBCHHHHHH
T ss_pred             HhcCCCCEEEcCCCChHHHHHHHHHHHHHHHhccCcccccchhhhH-HHHHHHHH-HHHHHHHHHhccCCCccchHHHHH
Confidence            22 25677776  69999999999999865322   1   1   34 67777776 666666655334567899999999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCCCccchHHHHHHHHHHHHH---Hhhh------chh-HHH-------HHHHHhhhchHHH
Q 047842          172 RFAFDNICMLVLGIDPNYLSVEFPQTVYANAFNTMEQALL---YRHI------VPK-ICW-------KLQKWLQIGEEKK  234 (465)
Q Consensus       172 ~~~~~i~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~------~p~-~~~-------~~~~~~~~~~~~~  234 (465)
                      .+++|++++++||.+++..+.  ....+.+....+.....   ....      +|. ...       .+.+++....+++
T Consensus       170 ~~~~dvi~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~r  247 (495)
T 2hi4_A          170 VSVANVIGAMCFGQHFPESSD--EMLSLVKNTHEFVETASSGNPLDFFPILRYLPNPALQRFKAFNQRFLWFLQKTVQEH  247 (495)
T ss_dssp             HHHHHHHHHHHHGGGSCTTCH--HHHHHHTTTHHHHTTSSTTCGGGTCGGGGGSCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCCCCH--HHHHHHHHHHHHHHhcccchHHHHhHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999998763221  11112221222211100   0000      110 011       1111111111111


Q ss_pred             HHH------------hhhh--------ccCCchHHHHHHHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhh
Q 047842          235 LSR------------AWKL--------SIDSSTSFLRDTAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATI  294 (465)
Q Consensus       235 ~~~------------~~~~--------~~dl~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~  294 (465)
                      .+.            ....        -..++++++.++++.+++||+|||+++++|++++|++||++|+||++|++ .+
T Consensus       248 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~-~v  326 (495)
T 2hi4_A          248 YQDFDKNSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELD-TV  326 (495)
T ss_dssp             HHTCCTTCCCSHHHHHHHHHHHCCEETTEECCTHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH-HH
T ss_pred             HHhhcccccccHHHHHHHHhhhccCccccCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHH-Hh
Confidence            110            0000        01368899999999999999999999999999999999999999999999 88


Q ss_pred             hccccccCcccccccChhhhccchhHHHHHhhhCCCCCCCcCcceeccCccccCCCeeeCCCCEEEEeecccccCCCCcC
Q 047842          295 VMHKKEEDGERRFFFNTKQANNLVYLHAALCETLRLYPPVPYNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWG  374 (465)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~  374 (465)
                      .+.++        .++.+++++||||+|||+|+||++|+++...+|.+.+|+.++||.|||||.|.++.+++||||++| 
T Consensus       327 ~~~~~--------~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-  397 (495)
T 2hi4_A          327 IGRER--------RPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELW-  397 (495)
T ss_dssp             TTTSS--------CCCGGGSTTCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBHHHHHHCTTTC-
T ss_pred             cCCCC--------CCChHHhccCHHHHHHHHHHHHccCCccCCCccccCCCeeEeCeEECCCCEEEeChHHhhCCcccC-
Confidence            76432        688999999999999999999999999975544455566779999999999999999999999999 


Q ss_pred             CCCCCcCCCCCCCCCCc-ccccCCccccccCCCCCCCcChHHHHHHHHHHHHHHHhccEEEeecCCCc--cCcceEEeec
Q 047842          375 NDCLEFKPERWISEKGC-IVHVPTYKFTAFHAGPRNCLGKDKALIQMKMVASAVIGNYHVKVAKGHPV--LPRKSIILNM  451 (465)
Q Consensus       375 ~~p~~F~P~Rfl~~~~~-~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~--~~~~~~~~~~  451 (465)
                      +||++|+||||++++++ ..+..+..++|||+|+|.|+|++||++|++++++.|+++|+|++.++.+.  ....+++..|
T Consensus       398 ~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p  477 (495)
T 2hi4_A          398 EDPSEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVDLTPIYGLTMKH  477 (495)
T ss_dssp             SSTTSCCGGGGBCTTSSSBCHHHHTTCCCSCCGGGCCTTHHHHHHHHHHHHHHHHHHCEEECCTTCCCCCCCBCSSSCBC
T ss_pred             CCcCccCcccccCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEeCCCCCCCCccccCCceecC
Confidence            99999999999976432 11123467999999999999999999999999999999999998765432  3344566677


Q ss_pred             CCCeeEEEEecC
Q 047842          452 KYGLKVQLSKRS  463 (465)
Q Consensus       452 ~~~~~~~~~~r~  463 (465)
                      ....+|+++ |.
T Consensus       478 ~~~~~v~~~-R~  488 (495)
T 2hi4_A          478 ARCEHVQAR-RF  488 (495)
T ss_dssp             CCCCCBEEE-CC
T ss_pred             CCcceEEEE-Ec
Confidence            643388888 84


No 15 
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=100.00  E-value=4.4e-67  Score=512.49  Aligned_cols=418  Identities=18%  Similarity=0.231  Sum_probs=311.9

Q ss_pred             CCCCCCCcccchHHHhhcccchhHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCchhhhhh
Q 047842           24 SPMRNWPVLGMLPGLLANTWYFHEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPDFRMIM  103 (465)
Q Consensus        24 Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~~~~~  103 (465)
                      |||+++|++||++.+......++.++. +++++||++|++   ++|+.++|+|+||+.+++++.++...|++++......
T Consensus        15 PgP~~~p~~G~~~~~~~~~~~~~~~~~-~l~~~yG~v~~~---~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~~~~~~~   90 (481)
T 3czh_A           15 PGPPGLPFIGNIYSLAASSELPHVYMR-KQSQVYGEIFSL---DLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFM   90 (481)
T ss_dssp             CCCCCBTTTBHHHHHHHCSSCHHHHHH-HHHHHHCSEEEE---EETTEEEEEEESHHHHHHHHTTTTTTTCBCCCCHHHH
T ss_pred             CCCCCCcccccHhhcCcccCcHHHHHH-HHHHHhCCEEEE---EECCccEEEECCHHHHHHHHhhchHhhCCCCCcHHHH
Confidence            899999999999987543212778898 999999999998   8888899999999999999987655676654332121


Q ss_pred             ccc-CCc-ccccCChhHHHHHHHhhhhcChhHH--HHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHHHHHHHHHHH
Q 047842          104 EPL-GDG-VLNADGDLWKIQRKIIHSVMKHNKF--ESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVLKRFAFDNIC  179 (465)
Q Consensus       104 ~~~-~~~-l~~~~g~~w~~~R~~~~~~~~~~~l--~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~i~~  179 (465)
                      ... +.+ ++..+|+.|+++|+++.+.|+...+  ..+ ++.+.+.+ +.+++.+..  .+++++|+.+.+..+++|+++
T Consensus        91 ~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~~~~~~-~~~i~~~~-~~l~~~l~~--~~~~~~d~~~~~~~~~~~vi~  166 (481)
T 3czh_A           91 KMTKMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSF-ESKILEET-KFFNDAIET--YKGRPFDFKQLITNAVSNITN  166 (481)
T ss_dssp             HHHTTCSSTTCCSSHHHHHHHHHHHHHHHHTTTTSTTH-HHHHHHHH-HHHHHHHHT--TTTCCBCCHHHHHHHHHHHHH
T ss_pred             hhcCCCCeEeCCCChHHHHHHHHHHHHHHHhcCChHHH-HHHHHHHH-HHHHHHHHH--cCCCCcCHHHHHHHHHHHHHH
Confidence            121 335 4457899999999999999976543  344 67777776 666666654  245679999999999999999


Q ss_pred             HHHhCCCCCCCCCCCccchHHHHHHHHHHHHH-----Hhhh------ch-hHHH-------HHHHHhhhchHHHHHH---
Q 047842          180 MLVLGIDPNYLSVEFPQTVYANAFNTMEQALL-----YRHI------VP-KICW-------KLQKWLQIGEEKKLSR---  237 (465)
Q Consensus       180 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~------~p-~~~~-------~~~~~~~~~~~~~~~~---  237 (465)
                      +++||.+++..+.  ....+.+.+..+.....     ....      +| ....       .+.+++....+++.+.   
T Consensus       167 ~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~  244 (481)
T 3czh_A          167 LIIFGERFTYEDT--DFQHMIELFSENVELAASASVFLYNAFPWIGILPFGKHQQLFRNAAVVYDFLSRLIEKASVNRKP  244 (481)
T ss_dssp             HHHHSSCCCTTCH--HHHHHHHHHHHHHHHTTSHHHHHHHHCGGGGGCSSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCT
T ss_pred             HHHcCCCCCCCCH--HHHHHHHHHHHHHhhhccchhHHhhhhHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            9999998764221  12223333333222110     0001      11 0011       1111111111111110   


Q ss_pred             ---------hhhh--------ccCCchHHHHHHHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccc
Q 047842          238 ---------AWKL--------SIDSSTSFLRDTAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKE  300 (465)
Q Consensus       238 ---------~~~~--------~~dl~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~  300 (465)
                               ....        -..++++++.++++.+++||+|||+++++|++++|++||++|+||++|++ .+.+.++ 
T Consensus       245 ~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~-~~~~~~~-  322 (481)
T 3czh_A          245 QLPQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEID-LIMGPNG-  322 (481)
T ss_dssp             TCCSSHHHHHHHHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH-HHTCSSS-
T ss_pred             CchHHHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHH-HhcCCCC-
Confidence                     0000        11378999999999999999999999999999999999999999999999 8876432 


Q ss_pred             cCcccccccChhhhccchhHHHHHhhhCCCCCCCcCcceeccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCc
Q 047842          301 EDGERRFFFNTKQANNLVYLHAALCETLRLYPPVPYNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEF  380 (465)
Q Consensus       301 ~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F  380 (465)
                             .++++++++||||+|||+|+||++|+++...+|.+.+|+.++||.|||||.|+++.+++||||++| +||++|
T Consensus       323 -------~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F  394 (481)
T 3czh_A          323 -------KPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYW-RDPEVF  394 (481)
T ss_dssp             -------CCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTC-SSTTSC
T ss_pred             -------CCChhhhhhChHHHHHHHHHHhhccccccCcceeecCCeEEeCEEcCCCCEEEechHHHhCCcccC-CCcccc
Confidence                   689999999999999999999999999965544455566779999999999999999999999999 999999


Q ss_pred             CCCCCCCCCCcccccCCccccccCCCCCCCcChHHHHHHHHHHHHHHHhccEEEeecCCCc--cCcceEEeecCCCeeEE
Q 047842          381 KPERWISEKGCIVHVPTYKFTAFHAGPRNCLGKDKALIQMKMVASAVIGNYHVKVAKGHPV--LPRKSIILNMKYGLKVQ  458 (465)
Q Consensus       381 ~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~--~~~~~~~~~~~~~~~~~  458 (465)
                      +||||++++++.  ..+..++|||+|+|.|+|++||++|++++++.||++|+++++++.+.  ....+.+..|. .+.++
T Consensus       395 ~PeR~l~~~~~~--~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p~-~~~~~  471 (481)
T 3czh_A          395 HPERFLDSSGYF--AKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMTLQPQ-PYLIC  471 (481)
T ss_dssp             CGGGGBCTTSCB--CCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECGGGCCCCCCCCSSSSCCCC-CCCBE
T ss_pred             CCCceeCCCCCC--cCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHheEEeCCCCCCCCcccCCCceecCC-ceEEE
Confidence            999999764321  34567999999999999999999999999999999999998765432  22335566665 58999


Q ss_pred             EEecCC
Q 047842          459 LSKRSL  464 (465)
Q Consensus       459 ~~~r~~  464 (465)
                      +++|-+
T Consensus       472 ~~~~~~  477 (481)
T 3czh_A          472 AERRHH  477 (481)
T ss_dssp             EEECC-
T ss_pred             EEeccc
Confidence            999853


No 16 
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=100.00  E-value=1.3e-66  Score=507.35  Aligned_cols=413  Identities=17%  Similarity=0.265  Sum_probs=313.2

Q ss_pred             CCCCCCCcccchHHHhhcccchhHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCch--hhh
Q 047842           24 SPMRNWPVLGMLPGLLANTWYFHEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPD--FRM  101 (465)
Q Consensus        24 Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~--~~~  101 (465)
                      |||+++|++||++++..  ...+..+. +++++||++|++   ++++.++|+|+||+.+++++.+  ..|.+...  ...
T Consensus         6 PGP~~~p~iG~l~~~~~--~~~~~~~~-~~~~~yG~v~~~---~~~~~~~v~v~~~~~~~~il~~--~~f~~~~~~~~~~   77 (470)
T 2ij2_A            6 PQPKTFGELKNLPLLNT--DKPVQALM-KIADELGEIFKF---EAPGRVTRYLSSQRLIKEACDE--SRFDKNLSQALKF   77 (470)
T ss_dssp             CCCCCCGGGTTGGGGCS--SCHHHHHH-HHHHHHCSEEEE---EETTEEEEEECCHHHHHHHTCT--TTEEECCCHHHHH
T ss_pred             CCCCCCCccccHHHHhc--ccchHHHH-HHHHHhCCeEEE---ecCCccEEEECCHHHHHHHHhh--cCcCcCchhHHHH
Confidence            99999999999998742  35677888 999999999999   8888899999999999999965  23433221  111


Q ss_pred             hhcccCCccccc--CChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHHHHHHHHHHH
Q 047842          102 IMEPLGDGVLNA--DGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVLKRFAFDNIC  179 (465)
Q Consensus       102 ~~~~~~~~l~~~--~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~i~~  179 (465)
                      .....+.++++.  +|+.|+++|+++++.|+...++.+ .+.+.+.+ +.+++.+... ..++++|+.+.+..+++|+++
T Consensus        78 ~~~~~~~~l~~~~~~g~~w~~~Rr~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~~-~~~~~vd~~~~~~~~~~~vi~  154 (470)
T 2ij2_A           78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGY-HAMMVDIA-VQLVQKWERL-NADEHIEVPEDMTRLTLDTIG  154 (470)
T ss_dssp             HHHHHTTSGGGSCTTSHHHHHHHHHHGGGGSTTTHHHH-HHHHHHHH-HHHHHHHHTC-CTTCCEEHHHHHHHHHHHHHH
T ss_pred             HHHhcCCceEEcCCCchHHHHHHHHhccccCHHHHHHH-HHHHHHHH-HHHHHHHHhh-CCCCeEEHHHHHHHHHHHHHH
Confidence            122346677776  899999999999999999999888 78888887 6666666542 235679999999999999999


Q ss_pred             HHHhCCCCCCCCCCCccchHHHHHHHHHHHHHHhhh-------chh-HHH-------HHHHHhhhchHHHHHH-------
Q 047842          180 MLVLGIDPNYLSVEFPQTVYANAFNTMEQALLYRHI-------VPK-ICW-------KLQKWLQIGEEKKLSR-------  237 (465)
Q Consensus       180 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~p~-~~~-------~~~~~~~~~~~~~~~~-------  237 (465)
                      .++||.+++..+.+ ....+...+............       ++. ...       .+.+++....+++.+.       
T Consensus       155 ~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~dl  233 (470)
T 2ij2_A          155 LCGFNYRFNSFYRD-QPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDL  233 (470)
T ss_dssp             HHHHSCCCCGGGCS-SCCHHHHHHHHHHHHHHHTC---CTTSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCSSH
T ss_pred             HHHcCCcccccccC-CCCHHHHHHHHHHHHHHHHHhhhhhHhhccchHHHHHHHHHHHHHHHHHHHHHHHHhcccCchhH
Confidence            99999988754211 123444444333322211100       110 001       0111111111111111       


Q ss_pred             ---hhhh-----ccCCchHHHHHHHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCccccccc
Q 047842          238 ---AWKL-----SIDSSTSFLRDTAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFF  309 (465)
Q Consensus       238 ---~~~~-----~~dl~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~  309 (465)
                         ..+.     -..++++++.++++.+++||+|||+++++|++++|++||++|+|+++|++ .+.+..         .+
T Consensus       234 l~~ll~~~~~~~~~~ls~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~-~~~~~~---------~~  303 (470)
T 2ij2_A          234 LTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAA-RVLVDP---------VP  303 (470)
T ss_dssp             HHHHHHCCCTTTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH-HHCCSS---------SC
T ss_pred             HHHHHhccCcccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHH-HHcCCC---------CC
Confidence               0000     01378999999999999999999999999999999999999999999999 887532         68


Q ss_pred             ChhhhccchhHHHHHhhhCCCCCCCcCcceeccCccccCCC-eeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCC
Q 047842          310 NTKQANNLVYLHAALCETLRLYPPVPYNHKIAGQADILPSG-HHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISE  388 (465)
Q Consensus       310 ~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g-~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~  388 (465)
                      +++++++||||+|||+|+||++|+++...|.+.+| +.++| |.|||||.|+++.+++||||++||+||++|+|||| ++
T Consensus       304 ~~~~~~~lpyl~a~i~E~lRl~p~~~~~~r~~~~d-~~~~g~~~Ip~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeR~-~~  381 (470)
T 2ij2_A          304 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKED-TVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-EN  381 (470)
T ss_dssp             CHHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSC-EEETTTEEECTTCEEEEEHHHHTTCHHHHCSCTTSCCGGGG-SS
T ss_pred             CHHHHhCCHHHHHHHHHHHhcCCCccccceeccCC-cccCCceEeCCCCEEEechHHhcCCHhhhCCCccccCcccc-CC
Confidence            99999999999999999999999999876666665 55688 99999999999999999999999999999999999 22


Q ss_pred             CCcccccCCccccccCCCCCCCcChHHHHHHHHHHHHHHHhccEEEeecCCCccCcceEEeecCCCeeEEEEecCC
Q 047842          389 KGCIVHVPTYKFTAFHAGPRNCLGKDKALIQMKMVASAVIGNYHVKVAKGHPVLPRKSIILNMKYGLKVQLSKRSL  464 (465)
Q Consensus       389 ~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  464 (465)
                         .....+..++|||+|+|.|+|++||++|++++++.||++|+|+..++.++.....++..|. +++|++++|+.
T Consensus       382 ---~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~-~~~v~~~~R~~  453 (470)
T 2ij2_A          382 ---PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE-GFVVKAKSKKI  453 (470)
T ss_dssp             ---GGGSCTTSCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEECTTCCCCCEEESSSEEET-TCEEEEEECCC
T ss_pred             ---CCcCCCccccCCCCCCCcCCcHHHHHHHHHHHHHHHHHHeeEeeCCCCccccccceEecCC-CeEEEEEEccC
Confidence               2222346799999999999999999999999999999999999322223433445677887 89999999953


No 17 
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=100.00  E-value=4.2e-66  Score=503.01  Aligned_cols=395  Identities=21%  Similarity=0.344  Sum_probs=311.9

Q ss_pred             chhHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCchhhh-hh-----cccCCcccc-cCCh
Q 047842           44 YFHEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPDFRM-IM-----EPLGDGVLN-ADGD  116 (465)
Q Consensus        44 ~~~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~~~-~~-----~~~~~~l~~-~~g~  116 (465)
                      .++..+. +|++|||+||++   ++|+.++|+|+||+.+++++.+  ..+.+.+.... ..     ...|.++++ .+|+
T Consensus        11 ~~~~~~~-~~~~kyG~v~~~---~~~~~~~vvv~~p~~~~~il~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~   84 (456)
T 3mdm_A           11 VLQDVFL-DWAKKYGPVVRV---NVFHKTSVIVTSPESVKKFLMS--TKYNKDSKMYRALQTVFGERLFGQGLVSECNYE   84 (456)
T ss_dssp             CHHHHHH-HHHHHHCSEEEE---EETTEEEEEECCHHHHHHHHTC--TTSCCCHHHHHHHHEETTEESSTTSTTTCCCHH
T ss_pred             hHHHHHH-HHHHHhCCeEEE---EeCCCCEEEECCHHHHHHHHhh--ccccccchhHHHHHHhhcccccCCCcccCCChH
Confidence            4677888 999999999999   8899999999999999999975  45666554322 21     234567665 5899


Q ss_pred             hHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcc
Q 047842          117 LWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVLKRFAFDNICMLVLGIDPNYLSVEFPQ  196 (465)
Q Consensus       117 ~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~i~~~~~fG~~~~~~~~~~~~  196 (465)
                      .|+++|+++++.|+...++.+ .+.+.+.+ +.+++.+.....+++++|+.+.+..+++|++++++||.+++..+..  .
T Consensus        85 ~w~~~Rr~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~--~  160 (456)
T 3mdm_A           85 RWHKQRRVIDLAFSRSSLVSL-METFNEKA-EQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGMETSMLLGA--Q  160 (456)
T ss_dssp             HHHHHHHHHGGGGSHHHHHTT-HHHHHHHH-HHHHHHHHHTCSSSSCEEHHHHHHHHHHHHHHHHHHSCCCCGGGTC--C
T ss_pred             HHHHHHhhcccccCHHHHHHH-HHHHHHHH-HHHHHHHHHhcCCCCeeeHHHHHHHHHHHHHHHHHcCCChhhhccc--c
Confidence            999999999999999999988 78888886 7777777765556678999999999999999999999998765432  2


Q ss_pred             chHHHHHHHHHHHHHH-----hhhchhHHHH----------HHHHhhhchHHHHHHhhh---------------hccCCc
Q 047842          197 TVYANAFNTMEQALLY-----RHIVPKICWK----------LQKWLQIGEEKKLSRAWK---------------LSIDSS  246 (465)
Q Consensus       197 ~~~~~~~~~~~~~~~~-----~~~~p~~~~~----------~~~~~~~~~~~~~~~~~~---------------~~~dl~  246 (465)
                      ..+...+..+......     ...+|.....          +..++....+++.+....               .-..++
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~d~l~~ll~~~~~~~~  240 (456)
T 3mdm_A          161 KPLSQAVKLMLEGITASRNTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRGEEVPADILTQILKAEEGAQD  240 (456)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSCGGGCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHHTSSCSS
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHHHHhcCCCCC
Confidence            3344444433332211     1112221110          001111111111111000               001368


Q ss_pred             hHHHHHHHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhHHHHHhh
Q 047842          247 TSFLRDTAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYLHAALCE  326 (465)
Q Consensus       247 ~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E  326 (465)
                      ++++.++++.+++||+|||+++++|++++|++||++|+|+++|++ .+.+..+        .++.+++.+||||+|||+|
T Consensus       241 ~~~l~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~-~~~~~~~--------~~~~~~l~~lpyl~a~i~E  311 (456)
T 3mdm_A          241 DEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVD-EVIGSKR--------YLDFEDLGRLQYLSQVLKE  311 (456)
T ss_dssp             SHHHHHHHHHHHHHTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHH-HHTTTCS--------SCCHHHHHHCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH-HHcCCCC--------CCCHHHHhcCHHHHHHHHH
Confidence            889999999999999999999999999999999999999999999 8876432        7899999999999999999


Q ss_pred             hCCCCCCCcCcceeccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccccccCCC
Q 047842          327 TLRLYPPVPYNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKFTAFHAG  406 (465)
Q Consensus       327 ~lRl~p~~~~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G  406 (465)
                      +||++|+++...|++.+ |+.++||.|||||.|+++.+++||||++| +||++|+||||+++.    ......++|||+|
T Consensus       312 ~lRl~p~~~~~~r~~~~-d~~i~g~~Ip~Gt~v~~~~~~~~~d~~~~-~dp~~F~PeRfl~~~----~~~~~~~~pFg~G  385 (456)
T 3mdm_A          312 SLRLYPPAWGTFRLLEE-ETLIDGVRVPGNTPLLFSTYVMGRMDTYF-EDPLTFNPDRFGPGA----PKPRFTYFPFSLG  385 (456)
T ss_dssp             HHHHCCSSCCEEEEECS-CEEETTEEECSSEEEEECHHHHHTCTTTS-SSTTSCCGGGGSTTS----CCCSSSCCTTCCG
T ss_pred             HHHhCCCccccccccCC-ceeECCEEECCCCEEEeehHHhcCCchhc-CCccccCccccCCCC----CCCCCcccCCCCC
Confidence            99999999987777655 55669999999999999999999999999 999999999999763    2245679999999


Q ss_pred             CCCCcChHHHHHHHHHHHHHHHhccEEEeecCCCccCcceEEeecCCCeeEEEEecC
Q 047842          407 PRNCLGKDKALIQMKMVASAVIGNYHVKVAKGHPVLPRKSIILNMKYGLKVQLSKRS  463 (465)
Q Consensus       407 ~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  463 (465)
                      +|.|||++||++|++++++.|+++|+|++.++.++......++.|++++++++++|+
T Consensus       386 ~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~r~  442 (456)
T 3mdm_A          386 HRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPGQRFGLQEQATLKPLDPVLCTLRPRG  442 (456)
T ss_dssp             GGSCTTHHHHHHHHHHHHHHHHHHEEEEECTTCCCCEEESSSEEESSCCEEEEEECC
T ss_pred             CcCCCCHHHHHHHHHHHHHHHHHhCeEEeCCCCcceeecceEEecCCCeEEEEEEcC
Confidence            999999999999999999999999999998877766666678899999999999995


No 18 
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=100.00  E-value=4e-67  Score=515.90  Aligned_cols=394  Identities=16%  Similarity=0.265  Sum_probs=293.2

Q ss_pred             cchhHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCchhhhhh-cccCC-cccccC-ChhHH
Q 047842           43 WYFHEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPDFRMIM-EPLGD-GVLNAD-GDLWK  119 (465)
Q Consensus        43 ~~~~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~~~~~-~~~~~-~l~~~~-g~~w~  119 (465)
                      .+++.++. +++++||++|++   ++|+.++|+|+||+.+++++.++...|++++...... ...+. +++.++ |+.|+
T Consensus        43 ~~~~~~~~-~l~~~yG~v~~~---~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~~~~~~~~~~~~~~~l~~~~~g~~w~  118 (496)
T 3qz1_A           43 PNLPIHLL-SLTQKLGPVYRL---RLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIPSYKLVSQRCQDISLGDYSLLWK  118 (496)
T ss_dssp             SCHHHHHH-HGGGTSCSEEEE---CSSSSCEEEECSTTHHHHTTTTSCSTTCBCCCCTTTTTSCTTCCCSSSSCCSHHHH
T ss_pred             CcchHHHH-HHHHHhCCEEEE---EeCCcCEEEECCHHHHHHHHHhCcHhhCCCCCcchHHHhcCCCCceEECCCCHHHH
Confidence            46788899 999999999999   9999999999999999999988766777665544333 22244 788888 99999


Q ss_pred             HHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHHHHHHHHHHHHHHhCCCCCCCCCCCccchH
Q 047842          120 IQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVLKRFAFDNICMLVLGIDPNYLSVEFPQTVY  199 (465)
Q Consensus       120 ~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~i~~~~~fG~~~~~~~~~~~~~~~  199 (465)
                      ++|+++++.|+...++.+ .+.+.+++ +.+++.+.+  ..++++|+.+.+..+++|++++++||.. +  +.  ....+
T Consensus       119 ~~Rr~~~~~f~~~~~~~~-~~~i~~~~-~~l~~~l~~--~~~~~vd~~~~~~~~~~dvi~~~~fG~~-~--~~--~~~~~  189 (496)
T 3qz1_A          119 AHKKLTRSALLLGTRSSM-EPWVDQLT-QEFCERMRV--QAGAPVTIQKEFSLLTCSIICYLTFGNK-E--DT--LVHAF  189 (496)
T ss_dssp             HHHHHHHHHHHC--CCCH-HHHHHHHH-HHHHHHHHT--TCSCCCHHHHHHTHHHHHHTTTTSTTCC-C--HH--HHHHH
T ss_pred             HHHHHHHHHHhhccHhhH-HHHHHHHH-HHHHHHHHh--cCCCccCHHHHHHHHHHHHHHHHhcCCC-C--Ch--HHHHH
Confidence            999999999986655556 78888887 667776654  4567899999999999999999999981 1  10  11122


Q ss_pred             HHHHHHHHHH-----HHHhhh------ch-hHHHHH-------HHHhhhchHHHHHHh------------hhhc------
Q 047842          200 ANAFNTMEQA-----LLYRHI------VP-KICWKL-------QKWLQIGEEKKLSRA------------WKLS------  242 (465)
Q Consensus       200 ~~~~~~~~~~-----~~~~~~------~p-~~~~~~-------~~~~~~~~~~~~~~~------------~~~~------  242 (465)
                      .+.+..+...     ......      +| .....+       .+++....+++.+..            .+..      
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~  269 (496)
T 3qz1_A          190 HDCVQDLMKTWDHWSIQILDMVPFLRFFPNPGLWRLKQAIENRDHMVEKQLRRHKESMVAGQWRDMTDYMLQGVGRQRVE  269 (496)
T ss_dssp             HHHHHTTTTTTSSHHHHHHHHCGGGCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSCCSSSHHHHTTSSTTCCC-
T ss_pred             HHHHHHHHHHhccchhHHHHhHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccchHHHHHHHHHhcccc
Confidence            2222211110     000001      11 111111       111111111111110            0000      


Q ss_pred             ---cCCchHHHHHHHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchh
Q 047842          243 ---IDSSTSFLRDTAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVY  319 (465)
Q Consensus       243 ---~dl~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  319 (465)
                         ..++++++.++++.+++||+|||+++++|++++|++||++|+|+++|++ .+.+.....  +.  .+ .+++++|||
T Consensus       270 ~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~-~~~~~~~~~--~~--~~-~~~~~~lpy  343 (496)
T 3qz1_A          270 EGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELD-RELGPGASC--SR--VT-YKDRARLPL  343 (496)
T ss_dssp             ----CCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH-HHHCSSSSS--SC--CS-TTGGGSCHH
T ss_pred             CCcccccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHH-HHhCCCccc--CC--CC-hhhhhcCcH
Confidence               0367889999999999999999999999999999999999999999999 887642110  11  56 899999999


Q ss_pred             HHHHHhhhCCCCCCCcCcceeccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCcc
Q 047842          320 LHAALCETLRLYPPVPYNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYK  399 (465)
Q Consensus       320 l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~  399 (465)
                      |+|||+|+||++|+++...+|.+.+|+.++||.|||||.|+++.+++||||++| +||++|+||||++++      ....
T Consensus       344 l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~-~dp~~F~PeR~l~~~------~~~~  416 (496)
T 3qz1_A          344 LNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVW-EQPHEFRPDRFLEPG------ANPS  416 (496)
T ss_dssp             HHHHHHHHHHHSCSSSSCCCEECSSCEECSSSEECTTCEEEECHHHHTTCTTTS-SSTTSCCCCCCC---------CCCC
T ss_pred             HHHHHHHHHHhcCCcccccCccCCCCceECCEEeCCCCEEEechHHhhCChhhc-CCcccCCcccccCCC------CCcC
Confidence            999999999999999986655555667779999999999999999999999999 999999999999763      1237


Q ss_pred             ccccCCCCCCCcChHHHHHHHHHHHHHHHhccEEEeecCC---CccCc--ceEEeecCCCeeEEEEecC
Q 047842          400 FTAFHAGPRNCLGKDKALIQMKMVASAVIGNYHVKVAKGH---PVLPR--KSIILNMKYGLKVQLSKRS  463 (465)
Q Consensus       400 ~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~r~  463 (465)
                      ++|||+|+|.|+|++||++|++++++.|+++|+|++.++.   ++...  .+.+..|+ ++.|++++|+
T Consensus       417 ~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~R~  484 (496)
T 3qz1_A          417 ALAFGCGARVCLGESLARLELFVVLARLLQAFTLLPPPVGALPSLQPDPYCGVNLKVQ-PFQVRLQPRG  484 (496)
T ss_dssp             CCSSCCSSSSCSSHHHHHHHHHHHHHHHHHHCCCCCCTTCCCCCSCCSCCCSSCCCCC-CCCCCCCCC-
T ss_pred             ccCCCCCCCCCccHHHHHHHHHHHHHHHHHhcEEeCCCCCCCCCCCcccCcceEecCC-ceEEEEEEec
Confidence            9999999999999999999999999999999999998543   22222  35566665 7999999996


No 19 
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=100.00  E-value=5.4e-66  Score=501.19  Aligned_cols=409  Identities=15%  Similarity=0.219  Sum_probs=293.0

Q ss_pred             CC-CCCCCcccchHHHhhcccchhHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCchhhhh
Q 047842           24 SP-MRNWPVLGMLPGLLANTWYFHEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPDFRMI  102 (465)
Q Consensus        24 Pg-p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~~~~  102 (465)
                      || |+++|++||++.+..   +++.++. +++++||++|.+   ++++.++++|+||+.+++++.++...|++++.+...
T Consensus         7 Pg~p~~~P~iG~~~~~~~---~~~~~~~-~l~~~yG~v~~~---~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~~~   79 (455)
T 2cib_A            7 PRVSGGHDEHGHLEEFRT---DPIGLMQ-RVRDELGDVGTF---QLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFM   79 (455)
T ss_dssp             CBCSCCCBTTBTHHHHTT---CHHHHHH-HHHHHHCSEEEE---EETTEEEEEECSHHHHHHHHHCCTTTEECTTSCGGG
T ss_pred             CCCCCCCCCccCHHHHhh---ChHHHHH-HHHHHcCCEEEE---EeCCceEEEECCHHHHHHHHhcCccccCcccchhHH
Confidence            76 789999999998853   4778899 999999999998   888889999999999999998754556655544222


Q ss_pred             hcccCCcccccCChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHHHHHHHHHHHHHH
Q 047842          103 MEPLGDGVLNADGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVLKRFAFDNICMLV  182 (465)
Q Consensus       103 ~~~~~~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~i~~~~~  182 (465)
                      ....|.+++ .+|+.|+++|+++++.|+...++.+ .+.+.+.+ +.+++.+..    ++.+|+.+.+..++++++++++
T Consensus        80 ~~~~g~~~~-~~~~~~~~~R~~~~~~f~~~~l~~~-~~~i~~~~-~~l~~~~~~----~~~vd~~~~~~~~~~~vi~~~~  152 (455)
T 2cib_A           80 TPIFGEGVV-FDASPERRKEMLHNAALRGEQMKGH-AATIEDQV-RRMIADWGE----AGEIDLLDFFAELTIYTSSACL  152 (455)
T ss_dssp             HHHHC---------------------CCHHHHHHH-HHHHHHHH-HHHHTTCCS----EEEEEHHHHHHHHHHHHHHHHH
T ss_pred             HhhcCCccc-cCcHHHHHHHhhhccccCHHHHHHH-HHHHHHHH-HHHHHHhCC----CCcEeHHHHHHHHHHHHHHHHH
Confidence            233355554 5899999999999999999999888 78888887 555555532    3469999999999999999999


Q ss_pred             hCCCCCCCCCCCccchHHHHHHHHHHHHH-Hhhhch----hHH-------HHHHHHhhhchHHHHHH-------------
Q 047842          183 LGIDPNYLSVEFPQTVYANAFNTMEQALL-YRHIVP----KIC-------WKLQKWLQIGEEKKLSR-------------  237 (465)
Q Consensus       183 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p----~~~-------~~~~~~~~~~~~~~~~~-------------  237 (465)
                      ||.+++....    ..+.+.+..+..... .....|    ...       ..+..++....+++.+.             
T Consensus       153 fG~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~dll~~  228 (455)
T 2cib_A          153 IGKKFRDQLD----GRFAKLYHELERGTDPLAYVDPYLPIESFRRRDEARNGLVALVADIMNGRIANPPTDKSDRDMLDV  228 (455)
T ss_dssp             TCHHHHTTCC----HHHHHHHHHHHTTCCGGGGTCTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CCCHHHH
T ss_pred             cCCCcchhhh----HHHHHHHHHHHhhhhHHHHhcccCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcccHHHH
Confidence            9987653221    234443333321100 000111    000       01111221111111110             


Q ss_pred             hhhhc----cC-CchHHHHHHHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChh
Q 047842          238 AWKLS----ID-SSTSFLRDTAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTK  312 (465)
Q Consensus       238 ~~~~~----~d-l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~  312 (465)
                      .....    .. ++++++.++++.+++||+|||+++++|++++|++||++|+||++|++ .+.+..+        .++.+
T Consensus       229 ll~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~Ei~-~~~~~~~--------~~~~~  299 (455)
T 2cib_A          229 LIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELD-ELYGDGR--------SVSFH  299 (455)
T ss_dssp             HHHCBCTTSSBSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH-HHGGGCC--------CHHHH
T ss_pred             HHHhhhhcCCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHH-HHhCCCC--------CCCHH
Confidence            00000    12 78999999999999999999999999999999999999999999999 8876432        68899


Q ss_pred             hhccchhHHHHHhhhCCCCCCCcCcceeccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcc
Q 047842          313 QANNLVYLHAALCETLRLYPPVPYNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCI  392 (465)
Q Consensus       313 ~l~~l~~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~  392 (465)
                      ++.+||||+|||+|+||++|+++...|.+.+ |+.++||.|||||.|+++.+++||||++| +||++|+||||++++...
T Consensus       300 ~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~-d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~l~~~~~~  377 (455)
T 2cib_A          300 ALRQIPQLENVLKETLRLHPPLIILMRVAKG-EFEVQGHRIHEGDLVAASPAISNRIPEDF-PDPHDFVPARYEQPRQED  377 (455)
T ss_dssp             TTSCCHHHHHHHHHHHHHSCSCCCEEEEECS-CEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCGGGGSTTTCHH
T ss_pred             HHhcCHHHHHHHHHHHhcCCcccccceeeCC-CceECCEEECCCCEEEEChHHhcCCcccC-CCccccCcccCCCCCccc
Confidence            9999999999999999999999876666655 55669999999999999999999999999 999999999999764221


Q ss_pred             cccCCccccccCCCCCCCcChHHHHHHHHHHHHHHHhccEEEeecCCCccC---cceEEeecCCCeeEEEEecC
Q 047842          393 VHVPTYKFTAFHAGPRNCLGKDKALIQMKMVASAVIGNYHVKVAKGHPVLP---RKSIILNMKYGLKVQLSKRS  463 (465)
Q Consensus       393 ~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~r~  463 (465)
                       ...+..++|||+|+|.|+|++||++|++++++.||++|+|++.++ +..+   ....+..|.++++|++++|+
T Consensus       378 -~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~-~~~~~~~~~~~~~~p~~~~~v~~~~R~  449 (455)
T 2cib_A          378 -LLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQP-PESYRNDHSKMVVQLAQPAAVRYRRRT  449 (455)
T ss_dssp             -HHCTTTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHEEEEESSC-GGGCCEECSSSSCEECSCCEEEEEEC-
T ss_pred             -ccCCccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCC-ccccccccccccccCCCCceEEEEECc
Confidence             113567999999999999999999999999999999999998632 2222   13445677778999999995


No 20 
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=100.00  E-value=3.3e-66  Score=504.79  Aligned_cols=404  Identities=21%  Similarity=0.300  Sum_probs=292.8

Q ss_pred             CCCCCCCcccchHHHhhcccchhHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCC-CCCchhhhh
Q 047842           24 SPMRNWPVLGMLPGLLANTWYFHEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNY-PKGPDFRMI  102 (465)
Q Consensus        24 Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~-~~~~~~~~~  102 (465)
                      |||+++|++||++.+..+   ++.++. ++++ ||+||++   ++|+.++++|+||+.+++++.++  .| .+.+.+...
T Consensus        26 PgP~~~P~iG~~~~~~~~---p~~~~~-~l~~-yGpv~~~---~~g~~~~~vv~~~~~i~~il~~~--~~~~~~~~~~~~   95 (467)
T 3dbg_A           26 VAGGGVPLLGHGWRLARD---PLAFMS-QLRD-HGDVVRI---KLGPKTVYAVTNPELTGALALNP--DYHIAGPLWESL   95 (467)
T ss_dssp             EECCCCSTTHHHHHHHHC---HHHHHH-HHGG-GCSEEEE---EETTEEEEEECSHHHHHHHHHCT--TC----------
T ss_pred             CCCCCCCcccchHHhccC---HHHHHH-HHHH-hCCEEEE---EeCCccEEEECCHHHHHHHHhCc--CcccccchHHHH
Confidence            689999999999998754   778888 8887 9999999   88899999999999999999875  55 444444333


Q ss_pred             hcccC-CcccccCChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHHHHHHHHHHHHH
Q 047842          103 MEPLG-DGVLNADGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVLKRFAFDNICML  181 (465)
Q Consensus       103 ~~~~~-~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~i~~~~  181 (465)
                      ....| .+++..+|+.|+++|+++++.|+...++.+ .+.+++.+ +.+++.+.    .++++|+.+.+..+++++++.+
T Consensus        96 ~~~~g~~~l~~~dg~~h~~~R~~l~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~----~~~~~d~~~~~~~~~~~vi~~~  169 (467)
T 3dbg_A           96 EGLLGKEGVATANGPLHRRQRRTIQPAFRLDAIPAY-GPIMEEEA-HALTERWQ----PGKTVDATSESFRVAVRVAARC  169 (467)
T ss_dssp             --------------------CGGGHHHHSTTTSTTT-HHHHHHHH-HHHHHHSC----TTSCEEHHHHHHHHHHHHHHHH
T ss_pred             HHhcCCCCcccCCcHHHHHHHHHhhhhhCHHHHHHH-HHHHHHHH-HHHHHHhc----cCCcCcHHHHHHHHHHHHHHHH
Confidence            34456 788999999999999999999999999887 77888886 66665554    2567999999999999999999


Q ss_pred             HhCCCCCCCCCCCccchHHHHHHHHHHHHHHhhhchh----------------HHHHHHHHhhhchHHHHHH--------
Q 047842          182 VLGIDPNYLSVEFPQTVYANAFNTMEQALLYRHIVPK----------------ICWKLQKWLQIGEEKKLSR--------  237 (465)
Q Consensus       182 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~----------------~~~~~~~~~~~~~~~~~~~--------  237 (465)
                      +||.+.+..    ....+...+..+..........|.                ....+.+++....+++.+.        
T Consensus       170 ~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~dll  245 (467)
T 3dbg_A          170 LLRGQYMDE----RAERLCVALATVFRGMYRRMVVPLGPLYRLPLPANRRFNDALADLHLLVDEIIAERRASGQKPDDLL  245 (467)
T ss_dssp             HSCSSCCHH----HHHHHHHHHHHHHHC------------------------CCHHHHHHHHHHHHHHHTTCCSSCCSHH
T ss_pred             HhCCcccch----hHHHHHHHHHHHHHHHHHHhccchhhhhhCCChHhHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHH
Confidence            999987631    122333333333222111111110                0000111111111111100        


Q ss_pred             --hhhhc----cCCchHHHHHHHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccCh
Q 047842          238 --AWKLS----IDSSTSFLRDTAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNT  311 (465)
Q Consensus       238 --~~~~~----~dl~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~  311 (465)
                        .....    ..++++++.++++.+++||+|||+++++|++++|++||++|++|++|++ .+.+..         .++.
T Consensus       246 ~~ll~~~~~~~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~Ei~-~~~~~~---------~~~~  315 (467)
T 3dbg_A          246 TALLEAKDDNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVE-AVTGGR---------PVAF  315 (467)
T ss_dssp             HHHTTC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH-HHHTTS---------CCCH
T ss_pred             HHHHhhccCCCCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH-HHhCCC---------CCCH
Confidence              00000    0268899999999999999999999999999999999999999999999 877532         7899


Q ss_pred             hhhccchhHHHHHhhhCCCCCCCcCcceeccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCc
Q 047842          312 KQANNLVYLHAALCETLRLYPPVPYNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGC  391 (465)
Q Consensus       312 ~~l~~l~~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~  391 (465)
                      +++++|||++|||+|+||++|+++...|++.+ |+.++||.|||||.|+++.+++||||++| +||++|+|+||+++++ 
T Consensus       316 ~~l~~l~yl~a~i~E~lRl~p~~~~~~R~~~~-d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeRfl~~~~-  392 (467)
T 3dbg_A          316 EDVRKLRHTGNVIVEAMRLRPAVWVLTRRAVA-ESELGGYRIPAGADIIYSPYAIQRDPKSY-DDNLEFDPDRWLPERA-  392 (467)
T ss_dssp             HHHTTCHHHHHHHHHHHHHSCSCCCEEEECSS-CEEETTEEECTTCEEEECHHHHHTCTTTC-TTTTCCCGGGGSHHHH-
T ss_pred             HHHhhCHHHHHHHHHHhhcCCCccccceeeCC-CccCCCEEECCCCEEEEChHHhcCCchhc-CCccccCCccCCCCcc-
Confidence            99999999999999999999999886666655 55669999999999999999999999999 9999999999996532 


Q ss_pred             ccccCCccccccCCCCCCCcChHHHHHHHHHHHHHHHhccEEEeecCCCccCcceEEeecCCCeeEEEEec
Q 047842          392 IVHVPTYKFTAFHAGPRNCLGKDKALIQMKMVASAVIGNYHVKVAKGHPVLPRKSIILNMKYGLKVQLSKR  462 (465)
Q Consensus       392 ~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  462 (465)
                       ....+..++|||+|+|.|+|++||++|++++++.|+++|++++.++.+.....+.+++|+ ++.++-..|
T Consensus       393 -~~~~~~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~-~l~~~~~~~  461 (467)
T 3dbg_A          393 -ANVPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGSNDAVRVGITLRPH-DLLVRPVAR  461 (467)
T ss_dssp             -TTSCTTSCCSSCSSSSSCTTHHHHHHHHHHHHHHHHHHEEEEECTTCEEEEEESSSEEEE-ECEEEEEEC
T ss_pred             -ccCCCccccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceeEeCCCCCCccceeeEecCC-CCccchhhh
Confidence             223456799999999999999999999999999999999999988777666667788886 577766555


No 21 
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=100.00  E-value=9.5e-65  Score=492.95  Aligned_cols=403  Identities=16%  Similarity=0.192  Sum_probs=310.6

Q ss_pred             CCCCC-CCcccchHHHhhcccchhHHHhHHHHhhcC-ceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCchhhh
Q 047842           24 SPMRN-WPVLGMLPGLLANTWYFHEFLAHDVLKKNR-GTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPDFRM  101 (465)
Q Consensus        24 Pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~kyg-~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~~~  101 (465)
                      |||++ +|++||++.+..+   .+.++. +++++|| ++|++   ++|+.++|+|+||+.+++++.++...+.+++.+..
T Consensus         6 Pg~p~~~P~iG~~~~~~~~---~~~~~~-~~~~~yG~~i~~~---~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~   78 (450)
T 3gw9_A            6 PVYPVTVPILGHIIQFGKS---PLGFMQ-ECKRQLKSGIFTI---NIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSF   78 (450)
T ss_dssp             CBCCCCSTTTBTHHHHHHC---HHHHHH-HHHHHHTCSEEEE---EETTEEEEEECCGGGTHHHHSSCTTTEESTGGGGG
T ss_pred             CCCCCCcchhccHHHHccC---HHHHHH-HHHHHhCCCeEEE---EECCEeEEEEeCHHHHHHHHhCChhhccchhhHHH
Confidence            77555 9999999988653   778888 9999999 99999   89999999999999999999887666766665544


Q ss_pred             hhcccCCcccc-cCChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhh-hhhhhcccCccccHHHHHHHHHHHHHH
Q 047842          102 IMEPLGDGVLN-ADGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIP-VLDHASELGTVVDLQDVLKRFAFDNIC  179 (465)
Q Consensus       102 ~~~~~~~~l~~-~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~-~l~~~~~~~~~vdl~~~~~~~~~~i~~  179 (465)
                      .....|.+++. .+|+.|+++|+++.+.|+...++.+ .+.+.+++ +.+++ .+.+   .++.+|+.+.+..+++++++
T Consensus        79 ~~~~~g~~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~-~~~i~~~~-~~ll~~~~~~---~~~~vd~~~~~~~~~~~~i~  153 (450)
T 3gw9_A           79 MVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNF-VPAIQHEV-RKFMAANWDK---DEGEINLLEDCSTMIINTAC  153 (450)
T ss_dssp             GHHHHCTTSGGGSCHHHHHHHHHHHHHTTSGGGCTTH-HHHHHHHH-HHHHHHHSCS---SEEEEEHHHHHHHHHHHHHH
T ss_pred             HHHHhcCCcccCCCcHHHHHHHHHHHHHHhHHHHHHH-HHHHHHHH-HHHHHHHhcc---CCCcccHHHHHHHHHHHHHH
Confidence            43455766654 5899999999999999999999888 67888887 44544 5542   34579999999999999999


Q ss_pred             HHHhCCCCCCCCCCCccchHHHHHHHHHHHHH-Hhhhch------hH-HH-------HHHHHhhhchHHHHHHh------
Q 047842          180 MLVLGIDPNYLSVEFPQTVYANAFNTMEQALL-YRHIVP------KI-CW-------KLQKWLQIGEEKKLSRA------  238 (465)
Q Consensus       180 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p------~~-~~-------~~~~~~~~~~~~~~~~~------  238 (465)
                      +++||.+++..+.   ...+.+.+..+..... .....|      .. ..       .+.+++....+++.+..      
T Consensus       154 ~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~  230 (450)
T 3gw9_A          154 QCLFGEDLRKRLD---ARRFAQLLAKMESSLIPAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKEEEVNKDSS  230 (450)
T ss_dssp             HHHSCHHHHHHSC---HHHHHHHHHHHHHTCCGGGGTCGGGGGSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCC
T ss_pred             HHHcCcchhhhhh---hHHHHHHHHHHHhccccchhcccchhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCCc
Confidence            9999987653221   2234443333322110 011111      00 00       11111111111111110      


Q ss_pred             --------hhh----ccCCchHHHHHHHHHHhhcchhhHHHHHHHHHHHHh--cCchHHHHHHHHHHHhhhccccccCcc
Q 047842          239 --------WKL----SIDSSTSFLRDTAFSFLGAGNDTISSGLVWFFWLVA--THPSVENKILKEIKATIVMHKKEEDGE  304 (465)
Q Consensus       239 --------~~~----~~dl~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~--~~p~~~~~l~~Ei~~~~~~~~~~~~~~  304 (465)
                              ...    -..++++++.++++.+++||+|||+.+++|++++|+  +||++|+++++|++ .+ .  +     
T Consensus       231 ~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~~~p~~~~~l~~Ei~-~~-~--~-----  301 (450)
T 3gw9_A          231 TSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIE-EF-P--A-----  301 (450)
T ss_dssp             CCSHHHHHHHCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGHHHHHHHHHHHT-TC-C--S-----
T ss_pred             cchHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHcCCcchhHHHHHHHHHH-hc-c--C-----
Confidence                    000    013688999999999999999999999999999999  99999999999999 76 1  1     


Q ss_pred             cccccChhhh-ccchhHHHHHhhhCCCCCCCcCcceeccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCC
Q 047842          305 RRFFFNTKQA-NNLVYLHAALCETLRLYPPVPYNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPE  383 (465)
Q Consensus       305 ~~~~~~~~~l-~~l~~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~  383 (465)
                         .++.+++ .+||||+|||+|+||++|+++...|++.+ |+.++||.|||||.|+++.+++||||++| +||++|+||
T Consensus       302 ---~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~R~~~~-d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~-~dp~~F~Pe  376 (450)
T 3gw9_A          302 ---QLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMA-DVKVGSYVVPKGDIIACSPLLSHHDEEAF-PEPRRWDPE  376 (450)
T ss_dssp             ---SCCHHHHHHHCHHHHHHHHHHHHHSCSCCCEEEEECS-CEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTT
T ss_pred             ---CCChHHHHHhcHHHHHHHHHHHHhCCchhcccccccc-ccccCCEEECCCCEEEEChHHhhCChhhc-CCccccCCC
Confidence               6789999 99999999999999999999987666655 55669999999999999999999999999 999999999


Q ss_pred             CCCCCCCcccccCCccccccCCCCCCCcChHHHHHHHHHHHHHHHhccEEEeecCCCcc-CcceEEeecC-CCeeEEEEe
Q 047842          384 RWISEKGCIVHVPTYKFTAFHAGPRNCLGKDKALIQMKMVASAVIGNYHVKVAKGHPVL-PRKSIILNMK-YGLKVQLSK  461 (465)
Q Consensus       384 Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~  461 (465)
                      |+.        ..+..++|||+|+|.|||++||++|++++++.||++|+|+++++.... .....+..|+ .++.|++++
T Consensus       377 R~~--------~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~  448 (450)
T 3gw9_A          377 RDE--------KVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPDPDYHTMVVGPTASQCRVKYIR  448 (450)
T ss_dssp             CCC--------SSTTCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHEEEEESSSSCCCEETTSSSCEECGGGCEEEEEE
T ss_pred             cCc--------CCCCceeCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEecCCCCCCCccccceecCCCCceEeEeee
Confidence            931        125679999999999999999999999999999999999998543222 1234567787 789999999


Q ss_pred             cC
Q 047842          462 RS  463 (465)
Q Consensus       462 r~  463 (465)
                      |+
T Consensus       449 R~  450 (450)
T 3gw9_A          449 RK  450 (450)
T ss_dssp             CC
T ss_pred             cC
Confidence            95


No 22 
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=100.00  E-value=1.7e-64  Score=492.31  Aligned_cols=409  Identities=16%  Similarity=0.224  Sum_probs=310.2

Q ss_pred             CC-CCCCCcccchHHHhhcccchhHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCchhhhh
Q 047842           24 SP-MRNWPVLGMLPGLLANTWYFHEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPDFRMI  102 (465)
Q Consensus        24 Pg-p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~~~~  102 (465)
                      || |+++|++||++.+..   .++.++. +++++||++|++   ++++.++|+|++|+.+++++.++...+.+...+...
T Consensus        14 Pg~P~~lP~iG~l~~~~~---~~~~~~~-~~~~~yG~v~~l---~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~   86 (461)
T 3i3k_A           14 PYIFSPIPFLGHAIAFGK---SPIEFLE-NAYEKYGPVFSF---TMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRL   86 (461)
T ss_dssp             CBCCCSSTTTBTHHHHHH---CHHHHHH-HHHHHHCSEEEE---EETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHH
T ss_pred             CCCCCCCCccccHHhhcc---CHHHHHH-HHHHHhCCEEEE---EecCceEEEEeChHHHHHHHhccccccccchHHHHh
Confidence            78 889999999999864   3788899 999999999999   999999999999999999998865556555544433


Q ss_pred             h-cccCCcccc-cCChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHHHHHHHHHHHH
Q 047842          103 M-EPLGDGVLN-ADGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVLKRFAFDNICM  180 (465)
Q Consensus       103 ~-~~~~~~l~~-~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~i~~~  180 (465)
                      . ...|.+++. .+|+.|+++|+++.+.|+...++.+ .+.+++++ +.+++.+.+    +..+|+.+.+..++++++++
T Consensus        87 ~~~~~g~g~~~~~~g~~w~~~Rr~~~~~f~~~~l~~~-~~~~~~~~-~~ll~~l~~----~~~~dl~~~~~~~~~~~~~~  160 (461)
T 3i3k_A           87 TTPVFGKGVAYDVPNPVFLEQKKMLKSGLNIAHFKQH-VSIIEKET-KEYFESWGE----SGEKNVFEALSELIILTASH  160 (461)
T ss_dssp             HHHHHCTTSGGGSCHHHHHHHHHHHHHHSSHHHHHHH-HHHHHHHH-HHHGGGGCS----EEEEEHHHHHHHHHHHHHHH
T ss_pred             hhhhcCCeeeeCCCcHHHHHHHHHHhhhhCHHHHHHH-HHHHHHHH-HHHHHHhhh----cCCcCHHHHHHHHHHHHHHH
Confidence            3 455777665 4799999999999999999999888 67888886 555555542    23589999999999999999


Q ss_pred             HHhCCCCCCCCCCCccchHHHHHHHHHHHH-HHhhhchh-----HHHHHH---HHhhhchHHHHHHhhhh----------
Q 047842          181 LVLGIDPNYLSVEFPQTVYANAFNTMEQAL-LYRHIVPK-----ICWKLQ---KWLQIGEEKKLSRAWKL----------  241 (465)
Q Consensus       181 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~-----~~~~~~---~~~~~~~~~~~~~~~~~----------  241 (465)
                      .+||.++....    ...+.+.+..+.... .....+|.     ......   ..+.....+.+++..+.          
T Consensus       161 ~~~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~P~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~l~~  236 (461)
T 3i3k_A          161 CLHGKEIRSQL----NEKVAQLYADLDGGFSHAAWLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQSQEKIDDILQT  236 (461)
T ss_dssp             HHTCHHHHHTC----CHHHHHHHHHHHTTSSHHHHHSCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCSHHHH
T ss_pred             HHccHhhhhHH----HHHHHHHHHHHHhccccchhhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccHHHH
Confidence            99997654321    112222222221110 00011111     011111   11111111111111110          


Q ss_pred             --------ccCCchHHHHHHHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhh
Q 047842          242 --------SIDSSTSFLRDTAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQ  313 (465)
Q Consensus       242 --------~~dl~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~  313 (465)
                              -..++++++..+++.+++||+|||+.+++|++++|++||++|+|+++|++ .+.+....       .++.++
T Consensus       237 ll~~~~~~~~~l~~~~i~~~~~~l~~ag~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~-~~~~~~~~-------~~~~~~  308 (461)
T 3i3k_A          237 LLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQK-TVCGENLP-------PLTYDQ  308 (461)
T ss_dssp             HHTCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH-HHHCTTCC-------CCCHHH
T ss_pred             HHHhhhccCCCCCHHHHHHHHHHHHhhccHHHHHHHHHHHHHHhcCHHHHHHHHHHHH-HHhcCCCC-------CCCHHH
Confidence                    01268999999999999999999999999999999999999999999999 88765421       578999


Q ss_pred             hccchhHHHHHhhhCCCCCCCcCcceeccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCccc
Q 047842          314 ANNLVYLHAALCETLRLYPPVPYNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIV  393 (465)
Q Consensus       314 l~~l~~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~  393 (465)
                      +.++||++|||+|+||++|+++...|.+.+ |+.++||.|||||.|+++.+++|+||++| +||++|+||||+++++  .
T Consensus       309 ~~~l~~l~a~i~E~lRl~p~~~~~~r~~~~-d~~~~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~Rfl~~~~--~  384 (461)
T 3i3k_A          309 LKDLNLLDRCIKETLRLRPPIMIMMRMART-PQTVAGYTIPPGHQVCVSPTVNQRLKDSW-VERLDFNPDRYLQDNP--A  384 (461)
T ss_dssp             HHTCHHHHHHHHHHHHHSCSCCCEEEEECS-CEEETTEEECTTCEEEECHHHHTTCTTTC-TTTTCCCGGGGGSCCH--H
T ss_pred             HhcChHHHHHHHHHHhcCCCccccccccCC-CccCCCEEECCCCEEEEChHHhcCCcccC-CCcccCCCCCCCCCCC--C
Confidence            999999999999999999999876555555 55569999999999999999999999999 9999999999997642  2


Q ss_pred             ccCCccccccCCCCCCCcChHHHHHHHHHHHHHHHhccEEEeecCCCccC-cceEEeecCCCeeEEEEe
Q 047842          394 HVPTYKFTAFHAGPRNCLGKDKALIQMKMVASAVIGNYHVKVAKGHPVLP-RKSIILNMKYGLKVQLSK  461 (465)
Q Consensus       394 ~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  461 (465)
                      ...+..++|||+|+|.|||++||.+|++++++.||++|+|+++++..... ....+..|.+++.++=.+
T Consensus       385 ~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  453 (461)
T 3i3k_A          385 SGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVNYTTMIHTPENPVIRYKRR  453 (461)
T ss_dssp             HHSSSSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCCCCBCCSSSSCCBSSCEEEEEEC
T ss_pred             CCCCcceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeEEeCCCCCCCcccceeecCCCCceEEeecc
Confidence            23456799999999999999999999999999999999999987653322 334456787766665433


No 23 
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=100.00  E-value=1.9e-62  Score=481.95  Aligned_cols=424  Identities=15%  Similarity=0.188  Sum_probs=296.3

Q ss_pred             CCCCC-CCcccchHHHhhcccchhHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCchhhhh
Q 047842           24 SPMRN-WPVLGMLPGLLANTWYFHEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPDFRMI  102 (465)
Q Consensus        24 Pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~~~~  102 (465)
                      |||++ +|++||++++..   +++.++. ++++|||++|++   ++|+.++|+|+||+.+++++.+. ..+.........
T Consensus        16 Pgp~~~~P~iG~~~~~~~---~~~~~~~-~~~~kyG~i~~~---~~g~~~~vvv~dp~~~~~il~~~-~~~~~~~~~~~~   87 (491)
T 3dax_A           16 PLENGLIPYLGCALQFGA---NPLEFLR-ANQRKHGHVFTC---KLMGKYVHFITNPLSYHKVLCHG-KYFDWKKFHFAT   87 (491)
T ss_dssp             CEEEEEESCTTTTGGGTC---CHHHHHH-HHHHHHCSEEEE---EETTEEEEEECCGGGTHHHHSCC-TTEESSHHHHHH
T ss_pred             CcCCCcccchhhHHHHhh---CHHHHHH-HHHHhcCCeEEE---EECCeEEEEEcChHHHHHHHcCC-ccCChHHHHHHH
Confidence            67777 899999998853   4778899 999999999999   99999999999999999999865 223333332222


Q ss_pred             h-cccCCccc-ccCChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhh--cccCccccHHHHHHHHHHHHH
Q 047842          103 M-EPLGDGVL-NADGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHA--SELGTVVDLQDVLKRFAFDNI  178 (465)
Q Consensus       103 ~-~~~~~~l~-~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~--~~~~~~vdl~~~~~~~~~~i~  178 (465)
                      . ...|.+++ ..+|+.|+++|+.+.+.|+...+..+ .+.+.+.+.+.+.+.....  ...+..+++...+..++++++
T Consensus        88 ~~~~~g~~~~~~~~g~~w~~~r~~~~~~f~~~~l~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~  166 (491)
T 3dax_A           88 SAKAFGHRSIDPMDGNTTENINDTFIKTLQGHALNSL-TESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFEAG  166 (491)
T ss_dssp             HHHHHTCCCCCGGGTSBCCCHHHHHHHHHSHHHHHHH-HHHHHHHHHHHHC----------CCEEEEHHHHHHHHHHHHH
T ss_pred             HHHHcCCCcccccchhHHHHHHHHHHHhcCcccHHHH-HHHHHHHHHHHHHhhccCCcCCCCceeccHHHHHHHHHHHHh
Confidence            2 33466666 67899999999999999999888877 4445545434333322111  123346889999999999999


Q ss_pred             HHHHhCCCCCCCCCCCccchHHHHHHHH---HHHHH-HhhhchhH-HH---HHHHHhh-hchHHH----------HHHh-
Q 047842          179 CMLVLGIDPNYLSVEFPQTVYANAFNTM---EQALL-YRHIVPKI-CW---KLQKWLQ-IGEEKK----------LSRA-  238 (465)
Q Consensus       179 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~p~~-~~---~~~~~~~-~~~~~~----------~~~~-  238 (465)
                      +..+||.+.+..+.  ....+......+   ..... ....+|.. ..   ...+.+. ....+.          +... 
T Consensus       167 ~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~p~l~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll  244 (491)
T 3dax_A          167 YLTIFGRDLTRRDT--QKAHILNNLDNFKQFDKVFPALVAGLPIHMFRTAHNAREKLAESLRHENLQKRESISELISLRM  244 (491)
T ss_dssp             HHHHHCBCSTTGGG--HHHHHHHHHHHHHHHHHHHHHHHTTCCGGGSHHHHHHHHHHHHHTSHHHHTTCBSCCHHHHHHH
T ss_pred             HHHHcCcccccccc--hhhhhhHHHHHHHHHHHHhHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHhhcccchhHHHHHHH
Confidence            99999987654221  111111111111   11111 11111211 11   1111110 000110          0000 


Q ss_pred             --hhhccCCchHHHHHHHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccC--cccccccChhhh
Q 047842          239 --WKLSIDSSTSFLRDTAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEED--GERRFFFNTKQA  314 (465)
Q Consensus       239 --~~~~~dl~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~--~~~~~~~~~~~l  314 (465)
                        ......++++++.++++.+++||+|||+++++|++++|++||++|+|+++|++ .+.+..+...  .+....++.+++
T Consensus       245 ~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~tl~~~l~~L~~~P~~~~kl~~Ei~-~v~~~~~~~~~~~~~~~~~~~~~l  323 (491)
T 3dax_A          245 FLNDTLSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVK-RTLENAGQKVSLEGNPICLSQAEL  323 (491)
T ss_dssp             HHHHHHBCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHH-HHHHTTTCCCCSSSCCCCCCHHHH
T ss_pred             HHHHhcCCChHHHHHHHHHHHHHHhccchHHHHHHHHHHHHcCHHHHHHHHHHHH-HHhhccccccccCCCccccCHHHH
Confidence              00111367888998999999999999999999999999999999999999999 8876432100  000003689999


Q ss_pred             ccchhHHHHHhhhCCCCCCCcCcceeccCccccC----CCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCC
Q 047842          315 NNLVYLHAALCETLRLYPPVPYNHKIAGQADILP----SGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKG  390 (465)
Q Consensus       315 ~~l~~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~----~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~  390 (465)
                      ++||||+|||+|+||++|+ +...|.+.+ |+.+    +||.|||||.|+++.+++|+||++| +||++|+||||+++++
T Consensus       324 ~~lpyl~a~i~E~lRl~p~-~~~~R~~~~-d~~l~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~-~dp~~F~PeRfl~~~~  400 (491)
T 3dax_A          324 NDLPVLDSIIKESLRLSSA-SLNIRTAKE-DFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIY-PDPLTFKYDRYLDENG  400 (491)
T ss_dssp             HCCHHHHHHHHHHHHHHEE-ECEEEEESS-SEEEEETTEEEEECTTCEEEECTHHHHTCTTTS-SSTTSCCTTTTBCTTS
T ss_pred             hcCHHHHHHHHHHHhcCCC-ccceeEecC-CeEeecCCCcEEeCCCCEEEechHhhcCCcccC-CCHHHcCCccccCCCc
Confidence            9999999999999999975 665565555 4444    6899999999999999999999999 9999999999997643


Q ss_pred             ccc-------ccCCccccccCCCCCCCcChHHHHHHHHHHHHHHHhccEEEeecCCC--c--cC-cceE-EeecCCCeeE
Q 047842          391 CIV-------HVPTYKFTAFHAGPRNCLGKDKALIQMKMVASAVIGNYHVKVAKGHP--V--LP-RKSI-ILNMKYGLKV  457 (465)
Q Consensus       391 ~~~-------~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~--~--~~-~~~~-~~~~~~~~~~  457 (465)
                      ...       ...+..++|||+|+|.|||++||++|++++++.||++|+|++.++..  .  .. ..+. +..|+.++++
T Consensus       401 ~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  480 (491)
T 3dax_A          401 KTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQSRAGLGILPPLNDIEF  480 (491)
T ss_dssp             SBCCCCEETTEECSCSCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEETTTTCCCCCBCGGGTBEEECCBSSCCEE
T ss_pred             cccccccccCcCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHHHeeEEEccCCCCCCCCCcccccccccCCCCCceE
Confidence            211       12356799999999999999999999999999999999999976531  1  11 1233 5678888888


Q ss_pred             EEEec
Q 047842          458 QLSKR  462 (465)
Q Consensus       458 ~~~~r  462 (465)
                      ++|+.
T Consensus       481 ~~r~~  485 (491)
T 3dax_A          481 KYKFK  485 (491)
T ss_dssp             EEEEC
T ss_pred             EEEec
Confidence            88875


No 24 
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=100.00  E-value=2.3e-61  Score=474.89  Aligned_cols=424  Identities=14%  Similarity=0.140  Sum_probs=290.1

Q ss_pred             CCCCC-CCcccchHHHhhcccchhHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCchhhhh
Q 047842           24 SPMRN-WPVLGMLPGLLANTWYFHEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPDFRMI  102 (465)
Q Consensus        24 Pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~~~~  102 (465)
                      |||++ +|++||++.+..   +.+.++. ++++|||++|++   ++|+.+++||+||+.+++++.++...++..+.....
T Consensus        21 Pgp~~~~P~iG~~~~~~~---~~~~~~~-~l~~kYG~i~~v---~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~   93 (498)
T 3b6h_A           21 PLDLGSIPWLGYALDFGK---DAASFLT-RMKEKHGDIFTI---LVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAYAIFL   93 (498)
T ss_dssp             CEECCSSTTTBTHHHHHH---CHHHHHH-HHHHHHCSEEEE---EETTEEEEEECCGGGHHHHHTCCTTTEECCHHHHHH
T ss_pred             CCCCCCCcchhhHHHhcc---CHHHHHH-HHHHHcCCeEEE---EECCeeEEEEcCHHHHHHHHhCccccCCchhhHHHH
Confidence            78888 899999998864   3778899 999999999999   999999999999999999998753223333333222


Q ss_pred             h-cccCCcccccCChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHHHHHHHHHHHHH
Q 047842          103 M-EPLGDGVLNADGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVLKRFAFDNICML  181 (465)
Q Consensus       103 ~-~~~~~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~i~~~~  181 (465)
                      . ..+|.+++..+|+.|   |+++.+.|+...+..+ ...+.+.+.+.+.+........+..+++...+..+++++++..
T Consensus        94 ~~~~~g~~~~~~~~~~~---rr~~~~~~~~~~l~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~vi~~~~~~~  169 (498)
T 3b6h_A           94 MERIFDVQLPHYSPSDE---KARMKLTLLHRELQAL-TEAMYTNLHAVLLGDATEAGSGWHEMGLLDFSYSFLLRAGYLT  169 (498)
T ss_dssp             HHHTSCCCCTTCCHHHH---HHHHHTTSSHHHHHHH-HHHHHHHHHHHHHHHHHHHCSSCEEEEHHHHHHHHHHHHHHHH
T ss_pred             HHHHcCCCccccCHHHH---HHHHHHhhchHhHHHH-HHHHHHHHHHHHhhcccccCCCcceecHHHHHHHHHHHHHHHh
Confidence            2 345666667777776   4555668888888777 3444444434433332221233446889999999999999999


Q ss_pred             HhCCCCCCCCCCCccchHHHHHHHHHHHHH-HhhhchhHHH---------HH---HHHhh-hchHHHHHH----------
Q 047842          182 VLGIDPNYLSVEFPQTVYANAFNTMEQALL-YRHIVPKICW---------KL---QKWLQ-IGEEKKLSR----------  237 (465)
Q Consensus       182 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~---------~~---~~~~~-~~~~~~~~~----------  237 (465)
                      +||.+++..+.. ........+..+..... ....+|....         ..   .+.+. ...++..++          
T Consensus       170 ~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~  248 (498)
T 3b6h_A          170 LYGIEALPRTHE-SQAQDRVHSADVFHTFRQLDRLLPKLARGSLSVGDKDHMCSVKSRLWKLLSPARLARRAHRSKWLES  248 (498)
T ss_dssp             HHCBSCSSCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHTCHHHHTTCBSCCHHHHH
T ss_pred             hcCccccccccc-chhhHHHhhHHHHHHHHHHHhhHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHhccccHHHHHHH
Confidence            999987532210 00011111111111110 0011111000         00   00000 000000000          


Q ss_pred             hh---hhccCCchHHHHHHHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhh
Q 047842          238 AW---KLSIDSSTSFLRDTAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQA  314 (465)
Q Consensus       238 ~~---~~~~dl~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l  314 (465)
                      ..   .....++++++. .++.+++||+|||+++++|++++|++||++|+|+++|++ .+.+..+.... ....++.+++
T Consensus       249 ll~~~~~~~~~~~~~~~-~~~~~l~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~-~v~~~~~~~~~-~~~~~~~~~l  325 (498)
T 3b6h_A          249 YLLHLEEMGVSEEMQAR-ALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELE-SILWQAEQPVS-QTTTLPQKVL  325 (498)
T ss_dssp             HHHHHHHTTCCHHHHHH-HHHHHHHHHHTTHHHHHHHHHHHHHTCHHHHHHHHHHHH-HHHHC-----------CCTHHH
T ss_pred             HHHHHHhCCCCHHHHHH-HHHHHHHHhhhchHHHHHHHHHHHHcCHHHHHHHHHHHH-HHhcccCCCCC-cccccCHHHH
Confidence            00   000124666777 888899999999999999999999999999999999999 88764321000 0003689999


Q ss_pred             ccchhHHHHHhhhCCCCCCCcCcceeccCcccc-C---CCeeeCCCCEEEEeecc-cccCCCCcCCCCCCcCCCCCCCCC
Q 047842          315 NNLVYLHAALCETLRLYPPVPYNHKIAGQADIL-P---SGHHIKKNQTVLISYYA-MGRMEEIWGNDCLEFKPERWISEK  389 (465)
Q Consensus       315 ~~l~~l~a~i~E~lRl~p~~~~~~r~~~~~~~~-~---~g~~Ip~gt~v~~~~~~-~~~d~~~~~~~p~~F~P~Rfl~~~  389 (465)
                      .+||||+|||+|+||++|+ +...|.+.+|+.+ +   +||.|||||.|+++.++ +|+||++| +||++|+||||++++
T Consensus       326 ~~lpyl~a~i~E~lRl~p~-~~~~R~~~~d~~~~~~~g~g~~ip~Gt~v~~~~~~~~~~d~~~~-~~p~~F~PeRfl~~~  403 (498)
T 3b6h_A          326 DSTPVLDSVLSESLRLTAA-PFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIY-TDPEVFKYNRFLNPD  403 (498)
T ss_dssp             HSCHHHHHHHHHHHHHHBC-BCEEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTS-SSTTSCCTTTTBCTT
T ss_pred             hcCHHHHHHHHHHHhccCC-CcceeeecCCeeeecCCCCeEEeCCCCEEEeCchHhhcCCcccc-CChhhcCcccccCCC
Confidence            9999999999999999975 6656666554443 2   68999999999999999 99999999 999999999999764


Q ss_pred             Cccc-------ccCCccccccCCCCCCCcChHHHHHHHHHHHHHHHhccEEEeecCCC--c--cC--cceEEeecCCCee
Q 047842          390 GCIV-------HVPTYKFTAFHAGPRNCLGKDKALIQMKMVASAVIGNYHVKVAKGHP--V--LP--RKSIILNMKYGLK  456 (465)
Q Consensus       390 ~~~~-------~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~--~--~~--~~~~~~~~~~~~~  456 (465)
                      +...       +..+..++|||+|+|.|||++||.+|++++++.||++|+|+++++..  .  ..  ....+..|..+++
T Consensus       404 ~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  483 (498)
T 3b6h_A          404 GSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINADVEIPEFDLSRYGFGLMQPEHDVP  483 (498)
T ss_dssp             SSBCCCCEETTEECSCSCCTTEETTEECSSHHHHHHHHHHHHHHHHHTEEEEESSTTCCCCCBCGGGTBSSBCCBSSCCE
T ss_pred             cccccccccccccCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHHceeEeCCCCCCCCCCCccccccccCCCCCCcc
Confidence            3211       12356799999999999999999999999999999999999976531  1  11  1223457777899


Q ss_pred             EEEEecCC
Q 047842          457 VQLSKRSL  464 (465)
Q Consensus       457 ~~~~~r~~  464 (465)
                      +++++|.+
T Consensus       484 ~~~~~~~~  491 (498)
T 3b6h_A          484 VRYRIRPH  491 (498)
T ss_dssp             EEEEECCC
T ss_pred             EEEEeccc
Confidence            99999853


No 25 
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=100.00  E-value=9.6e-62  Score=476.53  Aligned_cols=423  Identities=15%  Similarity=0.176  Sum_probs=306.5

Q ss_pred             CCCCC-CCcccchHHHhhcccchhHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCchhhhh
Q 047842           24 SPMRN-WPVLGMLPGLLANTWYFHEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPDFRMI  102 (465)
Q Consensus        24 Pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~~~~  102 (465)
                      |||++ +|++||++.+..   +++.++. +++++||++|++   ++|+.++++|++|+.++++++++ ..+.........
T Consensus        16 Pgp~~~lPliG~~~~~~~---~p~~~~~-~l~~~yGpv~~~---~lg~~~~vvv~~p~~v~~vl~~~-~~~~~~~~~~~~   87 (491)
T 3v8d_A           16 PLENGLIPYLGCALQFGA---NPLEFLR-ANQRKHGHVFTC---KLMGKYVHFITNPLSYHKVLCHG-KYFDWKKFHFAL   87 (491)
T ss_dssp             CEEEEEESSTTTTGGGTC---CHHHHHH-HHHHHHCSEEEE---EETTEEEEEECCGGGHHHHHSCC-TTEESSHHHHHH
T ss_pred             CCCCCCcceeccHHHHhc---CHHHHHH-HHHHHcCCceEE---EECCEEEEEEcCHHHHHHHHhcC-CccchHHHHHHH
Confidence            88988 699999999854   4888999 999999999999   89999999999999999999875 324344333322


Q ss_pred             h-cccCCc-ccccCChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcc--cCccccHHHHHHHHHHHHH
Q 047842          103 M-EPLGDG-VLNADGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASE--LGTVVDLQDVLKRFAFDNI  178 (465)
Q Consensus       103 ~-~~~~~~-l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~--~~~~vdl~~~~~~~~~~i~  178 (465)
                      . ...|.+ +...+|+.|+++|+.+.+.|+...++.+ .+.+.+++.+.+...+.....  .+..+++.+++..++++++
T Consensus        88 ~~~~~g~~~~~~~~g~~~~~~Rr~~~~~f~~~~l~~~-~~~i~~~~~~ll~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  166 (491)
T 3v8d_A           88 SAKAFGHRSIDPMDGNTTENINDTFIKTLQGHALNSL-TESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFEAG  166 (491)
T ss_dssp             HHHHHTCCCCCGGGSSBCCCHHHHHHHHHSHHHHHHH-HHHHHHHHHHHHSCCSSCGGGGCSCEEEEHHHHHHHHHHHHH
T ss_pred             HHHhcCCcccccccchhHHHHHHHHHHHcCccchHHH-HHHHHHHHHHHHHhhhhcccCCCCCcccCHHHHHHHHHHHHH
Confidence            2 444544 4445899999999999999999999988 677887874444333333221  3567899999999999999


Q ss_pred             HHHHhCCCCCCCCCCCccchHHHHHHHHH---HHHH-HhhhchhHH-HH-------HHHHhhhchH-------HHHHH--
Q 047842          179 CMLVLGIDPNYLSVEFPQTVYANAFNTME---QALL-YRHIVPKIC-WK-------LQKWLQIGEE-------KKLSR--  237 (465)
Q Consensus       179 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~p~~~-~~-------~~~~~~~~~~-------~~~~~--  237 (465)
                      +..+||.+....+.  ....+.+.+..+.   .... .....|... ..       +.+.+.....       ..+..  
T Consensus       167 ~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~d~l~~l~  244 (491)
T 3v8d_A          167 YLTIFGRDLTRRDT--QKAHILNNLDNFKQFDKVFPALVAGLPIHMFRTAHNAREKLAESLRHENLQKRESISELISLRM  244 (491)
T ss_dssp             HHHHHCBCCSCGGG--HHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCHHHHHHHHHHHHHTSHHHHTTCBSCCHHHHHHH
T ss_pred             HHHHcCccccccch--hhhhhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHH
Confidence            99999998763221  1112222222221   1111 111111111 11       1111110000       00000  


Q ss_pred             -hhhhccCCchHHHHHHHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccC--cccccccChhhh
Q 047842          238 -AWKLSIDSSTSFLRDTAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEED--GERRFFFNTKQA  314 (465)
Q Consensus       238 -~~~~~~dl~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~--~~~~~~~~~~~l  314 (465)
                       .......++++++..+++.+++||+|||+.+++|++++|++||++|+++++|++ .+.+..+...  .+....++.+++
T Consensus       245 ~~~~~~~~~~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~-~~~~~~~~~~~~~~~~~~~~~~~l  323 (491)
T 3v8d_A          245 FLNDTLSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVK-RTLENAGQKVSLEGNPICLSQAEL  323 (491)
T ss_dssp             HHHHHHBCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHH-HHHHHTTCCCCSSSSCCCCCHHHH
T ss_pred             HHhhccCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH-HHhhccccccccccccccCCHHHH
Confidence             001111478999999999999999999999999999999999999999999999 8876532100  000016789999


Q ss_pred             ccchhHHHHHhhhCCCCCCCcCcceeccCccccC----CCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCC
Q 047842          315 NNLVYLHAALCETLRLYPPVPYNHKIAGQADILP----SGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKG  390 (465)
Q Consensus       315 ~~l~~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~----~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~  390 (465)
                      .++|||+|||+|+||++| .+...|.+.+ |+.+    +||.||||+.|+++.+++|+||++| +||++|+|+||++.++
T Consensus       324 ~~~~~l~a~i~E~lRl~p-~~~~~R~~~~-d~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~p~R~~~~~~  400 (491)
T 3v8d_A          324 NDLPVLDSIIKESLRLSS-ASLNIRTAKE-DFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIY-PDPLTFKYDRYLDENG  400 (491)
T ss_dssp             HCCHHHHHHHHHHHHHHE-EECEEEEESS-SEEEECSSCEEEECTTCEEEECTHHHHTCTTTS-SSTTSCCTTTTBCTTS
T ss_pred             hcChHHHHHHHHHhhcCC-CCccceeccC-CeeEeecCCcEEeCCCCEEEecchhhcCCcccC-CCccccCcccccCCCC
Confidence            999999999999999997 4455555555 5555    8999999999999999999999999 9999999999997654


Q ss_pred             ccc-------ccCCccccccCCCCCCCcChHHHHHHHHHHHHHHHhccEEEeecCCCc----cC--cceEEeecCCCeeE
Q 047842          391 CIV-------HVPTYKFTAFHAGPRNCLGKDKALIQMKMVASAVIGNYHVKVAKGHPV----LP--RKSIILNMKYGLKV  457 (465)
Q Consensus       391 ~~~-------~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~----~~--~~~~~~~~~~~~~~  457 (465)
                      ...       ...+..++|||+|+|.|||++||.+|++++++.|+++|+|+++++...    ..  ....+..|+.++.|
T Consensus       401 ~~~~~~~~~~~~~~~~~~~FG~G~~~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~v  480 (491)
T 3v8d_A          401 KTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQSRAGLGILPPLNDIEF  480 (491)
T ss_dssp             SBCCCCEETTEECSCCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEEC---CCCCCBCGGGTBEEECCBSSCCEE
T ss_pred             CcccccccccccCCCcccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceEEeCCCCCCCCCCCcccCcCcccCCCCCeEE
Confidence            321       123567999999999999999999999999999999999999876321    12  23456788888988


Q ss_pred             EEEe
Q 047842          458 QLSK  461 (465)
Q Consensus       458 ~~~~  461 (465)
                      +++-
T Consensus       481 ~~~~  484 (491)
T 3v8d_A          481 KYKF  484 (491)
T ss_dssp             EEEE
T ss_pred             EEEe
Confidence            8874


No 26 
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=100.00  E-value=2.2e-61  Score=472.44  Aligned_cols=409  Identities=15%  Similarity=0.128  Sum_probs=280.9

Q ss_pred             CCCCC-CCcccchHHHhhcccchhHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCchhhhh
Q 047842           24 SPMRN-WPVLGMLPGLLANTWYFHEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPDFRMI  102 (465)
Q Consensus        24 Pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~~~~  102 (465)
                      |||++ +|++||++.+..   +++.++. +++++||++|.+   ++|+.++++|++|+.+++++.++ ..++..+.....
T Consensus        21 Pgp~~~~P~iG~~~~~~~---~~~~~~~-~l~~~yG~v~~~---~~g~~~~vvv~~~~~~~~il~~~-~~~~~~~~~~~~   92 (475)
T 3b98_A           21 PLDKGMIPWLGHALEFGK---DAAKFLT-RMKEKHGDIFTV---RAAGLYITVLLDSNCYDAVLSDV-ASLDQTSYAQVL   92 (475)
T ss_dssp             CEECCSSTTTBTHHHHHH---CHHHHHH-HHHHHHCSEEEE---EETTEEEEEECCTTTHHHHHTCT-TTEESHHHHHHH
T ss_pred             CCCCCCcchHHhHHHHhh---CHHHHHH-HHHHHhCCeEEE---EECCceEEEEeCHHHHHHHHcCc-ccCCchHHHHHH
Confidence            78887 999999998864   3788999 999999999999   88999999999999999999875 223333322222


Q ss_pred             h-cccCCcccccCChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhh-cccCccccHHHHHHHHHHHHHHH
Q 047842          103 M-EPLGDGVLNADGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHA-SELGTVVDLQDVLKRFAFDNICM  180 (465)
Q Consensus       103 ~-~~~~~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~-~~~~~~vdl~~~~~~~~~~i~~~  180 (465)
                      . ...|.+++..+|+.|   |+++.+.|+...+..+ .+.+.+.+.+.+....... ......+++...+..+++++++.
T Consensus        93 ~~~~~g~~~~~~~~~~~---R~~~~~~f~~~~l~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (475)
T 3b98_A           93 MKRIFNMILPSHNPESE---KKRAEMHFQGASLTQL-SNSMQNNLRLLMTPSEMGLKTSEWKKDGLFNLCYSLLFKTGYL  168 (475)
T ss_dssp             HHHTTCCCCTTCCHHHH---HHHHHHHTSHHHHHHH-HHHHHHHHHHHSSTTTTTCSSCSCEEEEHHHHHHHHHHHHHHH
T ss_pred             HHHHhCCCCCCCChHHH---HHHHHHHcChhhHHHH-HHHHHHHHHHHHhhcccccCCCCceeehHHHHHHHHHHHHhhh
Confidence            2 345666667777765   5677789999888887 5666666634433332221 12234578899999999999999


Q ss_pred             HHhCCCCCCCCCCCccchHHHHHHHHHHHHHH--hhhchhHH-HH-------HHHHhhhch-------HHHHHHh---hh
Q 047842          181 LVLGIDPNYLSVEFPQTVYANAFNTMEQALLY--RHIVPKIC-WK-------LQKWLQIGE-------EKKLSRA---WK  240 (465)
Q Consensus       181 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~-~~-------~~~~~~~~~-------~~~~~~~---~~  240 (465)
                      ..||.+.+..+   ....+...+..+......  ....+... ..       +.+.+....       ...+...   ..
T Consensus       169 ~~~g~~~~~~~---~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~  245 (475)
T 3b98_A          169 TVFGAENNNSA---ALTQIYEEFRRFDKLLPKLARTTVNKEEKQIASAAREKLWKWLTPSGLDRKPREQSWLGSYVKQLQ  245 (475)
T ss_dssp             HHHCCTTSCHH---HHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHSCTTSCCCCCTTSHHHHHHHHHH
T ss_pred             heeCCccccch---hcHHHHHHHHHHHhhhHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHH
Confidence            88995422100   011122222111111110  00111100 00       111110000       0000000   00


Q ss_pred             hccCCchHHHHHHHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhH
Q 047842          241 LSIDSSTSFLRDTAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYL  320 (465)
Q Consensus       241 ~~~dl~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l  320 (465)
                      .-..++++++. +++.+++||+|||+++++|++++|++||++|++|++|++ ..  . .        .++.+++.+||||
T Consensus       246 ~~~~~~~~~i~-~~~~~l~ag~~TTa~~l~~~l~~L~~~P~~~~~l~~Ei~-~~--~-~--------~~~~~~~~~lpyl  312 (475)
T 3b98_A          246 DEGIDAEMQRR-AMLLQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEIQ-GG--K-H--------LRLEERQKNTPVF  312 (475)
T ss_dssp             HTTCCHHHHHH-HHHHHHHHHHSSHHHHHHHHHHHHHTCHHHHHHHHHHHC------------------------CCHHH
T ss_pred             HcCCCHHHHHH-HHHHHHHHccccHHHHHHHHHHHHHcCHHHHHHHHHHHh-cC--C-C--------CCCHHHHhcCHHH
Confidence            01135777887 889999999999999999999999999999999999997 32  1 1        4689999999999


Q ss_pred             HHHHhhhCCCCCCCcCcceeccCccccC-----CCeeeCCCCEEEEeecc-cccCCCCcCCCCCCcCCCCCCCCCCccc-
Q 047842          321 HAALCETLRLYPPVPYNHKIAGQADILP-----SGHHIKKNQTVLISYYA-MGRMEEIWGNDCLEFKPERWISEKGCIV-  393 (465)
Q Consensus       321 ~a~i~E~lRl~p~~~~~~r~~~~~~~~~-----~g~~Ip~gt~v~~~~~~-~~~d~~~~~~~p~~F~P~Rfl~~~~~~~-  393 (465)
                      +|||+|+||++|+ +...|.+.+ |+.+     +||.|||||.|+++.++ +||||++| +||++|+||||++++++.. 
T Consensus       313 ~a~i~E~lRl~p~-~~~~R~~~~-d~~l~~~~g~g~~Ip~Gt~V~~~~~~~~~rdp~~~-~dP~~F~PeRfl~~~~~~~~  389 (475)
T 3b98_A          313 DSVLWETLRLTAA-ALITRDVTQ-DKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIH-QQPEMFQFDRFLNADRTEKK  389 (475)
T ss_dssp             HHHHHHHHHHHEE-ECEEEEECS-CEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTS-SSTTSCCTTTTBCTTSCBCC
T ss_pred             HHHHHHHHhcCCc-cceeEEecC-CeEeecCCCCeEEECCCCEEEeCcHHHhcCChhhc-CCcccCCcchhcCCCCCccc
Confidence            9999999999986 665555555 5554     78999999999999999 99999999 9999999999997643211 


Q ss_pred             ------ccCCccccccCCCCCCCcChHHHHHHHHHHHHHHHhccEEEeecCCC--c--cC--cceEEeecCCCeeEEEEe
Q 047842          394 ------HVPTYKFTAFHAGPRNCLGKDKALIQMKMVASAVIGNYHVKVAKGHP--V--LP--RKSIILNMKYGLKVQLSK  461 (465)
Q Consensus       394 ------~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~--~--~~--~~~~~~~~~~~~~~~~~~  461 (465)
                            +..+..++|||+|+|.|||++||++|++++++.||++|+|+++++..  .  ..  ....+..|..++++++++
T Consensus       390 ~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  469 (475)
T 3b98_A          390 DFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVELCDKNATVPLVDPSRYGFGILQPAGDLEIRYRI  469 (475)
T ss_dssp             CCBSSSCBCSCSCCTTCSTTSCCTTHHHHHHHHHHHHHHHHHHEEEEESSTTCCCCCBCGGGTBEEECCBSSCCEEEEEE
T ss_pred             cccccccccccCccCcCCCCCCCCCHHHHHHHHHHHHHHHHHhEEEEECCCCCCCCCCCcccccccccCCCCCceEEEEe
Confidence                  12356799999999999999999999999999999999999987531  1  11  123466788899999999


Q ss_pred             cC
Q 047842          462 RS  463 (465)
Q Consensus       462 r~  463 (465)
                      |+
T Consensus       470 R~  471 (475)
T 3b98_A          470 RF  471 (475)
T ss_dssp             C-
T ss_pred             cc
Confidence            96


No 27 
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=100.00  E-value=9.1e-62  Score=467.31  Aligned_cols=381  Identities=14%  Similarity=0.104  Sum_probs=277.6

Q ss_pred             CCCCCCCcccchHHHhhcccchhHHHhHHHHhhcCceEEEecccc-cccceEEecChhhHHHhHhcCCCCCCCCch--hh
Q 047842           24 SPMRNWPVLGMLPGLLANTWYFHEFLAHDVLKKNRGTFEFTGPWF-AQMDLIITSDPMNVHYISSKNFSNYPKGPD--FR  100 (465)
Q Consensus        24 Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~kyg~v~~~~~~~~-~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~--~~  100 (465)
                      |||+++|++|++......  +++.++. ++ ++||+||++   ++ ++.++|+|+||+.+++++.++  .|.+++.  +.
T Consensus        29 PGP~~~p~lG~~~~~~~~--~p~~~~~-~l-~~yGpv~~~---~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~   99 (436)
T 2cd8_A           29 TASPPVLDLGALGQDFAA--DPYPTYA-RL-RAEGPAHRV---RTPEGDEVWLVVGYDRARAVLADP--RFSKDWRNSTT   99 (436)
T ss_dssp             -----CCBHHHHHHHHHH--CCHHHHH-HH-HTTCSEEEE---ECSSCCEEEEECSHHHHHHHHHCT--TEECCGGGCSS
T ss_pred             CCCCccccCCCCCccccc--ChHHHHH-HH-HHhCCeeee---ccCCCCeEEEEcCHHHHHHHHcCC--CCccccccccc
Confidence            999999999998733222  4778888 88 899999999   76 778899999999999999875  5666543  22


Q ss_pred             hhh---cccCCcccccCChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHH-HHHHHH
Q 047842          101 MIM---EPLGDGVLNADGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVL-KRFAFD  176 (465)
Q Consensus       101 ~~~---~~~~~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~  176 (465)
                      ...   ...+.+++..+|+.|+++|+++++.|+...++.+ .+.+++.+ +.+++.+.+  ..++++|+.+.+ ..++++
T Consensus       100 ~~~~~~~~~~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~--~~~~~vd~~~~~~~~~~~~  175 (436)
T 2cd8_A          100 PLTEAEAALNHNMLESDPPRHTRLRKLVAREFTMRRVELL-RPRVQEIV-DGLVDAMLA--APDGRADLMESLAWPLPIT  175 (436)
T ss_dssp             CCCTTGGGTCCSGGGCCTTHHHHHHHHHGGGSSHHHHHTT-HHHHHHHH-HHHHHHHHT--CTTSCEEHHHHTTTHHHHH
T ss_pred             ccccccccccccccccCchHHHHHHHHhHHhhCHHHHHHH-HHHHHHHH-HHHHHHHHh--ccCCCcchHHHHHHHHHHH
Confidence            111   2235678889999999999999999999999888 78888887 666666653  225679999977 579999


Q ss_pred             HHHHHHhCCCCCCCCCCCccchHHHHHHHHHHHHHHhhhchhHHHHHHHHhhhchHH------------HHHHhhhhccC
Q 047842          177 NICMLVLGIDPNYLSVEFPQTVYANAFNTMEQALLYRHIVPKICWKLQKWLQIGEEK------------KLSRAWKLSID  244 (465)
Q Consensus       177 i~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~------------~~~~~~~~~~d  244 (465)
                      +++. +||.+.+.      ...+......+.... ...........+..++....++            .++.....-..
T Consensus       176 vi~~-~~G~~~~~------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~~~  247 (436)
T 2cd8_A          176 VISE-LLGVPEPD------RAAFRVWTDAFVFPD-DPAQAQTAMAEMSGYLSRLIDSKRGQDGEDLLSALVRTSDEDGSR  247 (436)
T ss_dssp             HHHH-HHTCCGGG------HHHHHHHHHHHHSCS-STTHHHHHHHHHHHHHHHHHHHHTTSCCCSHHHHHHHHHHHCTTT
T ss_pred             HHHH-HhCCCHHH------HHHHHHHHHHHhccC-CHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHhhhccCCC
Confidence            9998 69986541      223333333222100 0000000011111111111111            11111110124


Q ss_pred             CchHHHHHHHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhHHHHH
Q 047842          245 SSTSFLRDTAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYLHAAL  324 (465)
Q Consensus       245 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i  324 (465)
                      ++++++.++++.+++||+|||+++++|++++|++||++|+|+++|+.                           |++|||
T Consensus       248 ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~e~~---------------------------~l~a~i  300 (436)
T 2cd8_A          248 LTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADMT---------------------------LLDGAV  300 (436)
T ss_dssp             SCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG---------------------------GHHHHH
T ss_pred             CCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHhhChh---------------------------hHHHHH
Confidence            89999999999999999999999999999999999999999999875                           689999


Q ss_pred             hhhCCCCCCCcCcceeccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccccccC
Q 047842          325 CETLRLYPPVPYNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKFTAFH  404 (465)
Q Consensus       325 ~E~lRl~p~~~~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg  404 (465)
                      +|+||++|+++...+|.+.+|+.++||.|||||.|+++.+++||||++| +||++|+||||-           ..++|||
T Consensus       301 ~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~~pFG  368 (436)
T 2cd8_A          301 EEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERF-PDPHRFDIRRDT-----------AGHLAFG  368 (436)
T ss_dssp             HHHHHHHCSBSSCCCBEESSCEEETTEEECTTCCEEECHHHHTTCTTTS-SSTTSCCTTSCC-----------TTCCTTC
T ss_pred             HHHHHhcCcccCceeEEeCCCeEECCEEECCCCEEEeChHHhCCCcccC-CCccccCCCCCC-----------CCCCCCC
Confidence            9999999999944444444566679999999999999999999999999 999999999961           3589999


Q ss_pred             CCCCCCcChHHHHHHHHHHHHHHHhcc-EEEeec-CCCccCcceEEeecCCCeeEEEEecCC
Q 047842          405 AGPRNCLGKDKALIQMKMVASAVIGNY-HVKVAK-GHPVLPRKSIILNMKYGLKVQLSKRSL  464 (465)
Q Consensus       405 ~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~r~~  464 (465)
                      +|+|.|+|++||++|++++++.|+++| ++++.. +.++.+..+.++++..+++|++++|+.
T Consensus       369 ~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~r~~  430 (436)
T 2cd8_A          369 HGIHFCIGAPLARLEARIAVRALLERCPDLALDVSPGELVWYPNPMIRGLKALPIRWRRGRE  430 (436)
T ss_dssp             CSTTCCTTHHHHHHHHHHHHHHHHHSCTTCCBCSCGGGCCBCCCTTBCCBSCCEEC------
T ss_pred             CCCCCCcCHHHHHHHHHHHHHHHHHhCCCceecCCCccceeccCcccCCcceeEEEEecCcc
Confidence            999999999999999999999999999 699863 334444445556677789999999964


No 28 
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=100.00  E-value=1.3e-61  Score=460.24  Aligned_cols=373  Identities=20%  Similarity=0.278  Sum_probs=292.0

Q ss_pred             CCCCCCcccchHHHhhcccchhHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCc-hhhhhh
Q 047842           25 PMRNWPVLGMLPGLLANTWYFHEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGP-DFRMIM  103 (465)
Q Consensus        25 gp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~-~~~~~~  103 (465)
                      +++.+|++||++.+..   +++.++. +++++||++|+    ++|+.++|+++||+.+++++.++  .|++++ .+....
T Consensus         3 ~~~~~p~iGnl~~~~~---~p~~~~~-~l~~~yGpv~~----~~g~~~~vvv~~~~~i~~il~~~--~f~~~~~~~~~~~   72 (389)
T 1n97_A            3 RLSLREAWPYLKDLQQ---DPLAVLL-AWGRAHPRLFL----PLPRFPLALIFDPEGVEGALLAE--GTTKATFQYRALS   72 (389)
T ss_dssp             ECCHHHHHHHHHHHHH---CHHHHHH-HHHHHCSEEEE----CCTTCCEEEECSHHHHHHHHHCT--TEECCSHHHHHHH
T ss_pred             ccccccccccHHHHhh---ChHHHHH-HHHHHcCCeeE----ecCCccEEEECCHHHHHHHHhcC--CCCCChhHHHHHH
Confidence            4667899999998854   3788899 99999999876    24678999999999999999875  677765 333222


Q ss_pred             cccCCcccccCChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHHHHHHHHHHHHHHh
Q 047842          104 EPLGDGVLNADGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVLKRFAFDNICMLVL  183 (465)
Q Consensus       104 ~~~~~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~i~~~~~f  183 (465)
                      ...+.+++..+|+.|+++|+++++.|+...++.+ .+.+.+.+ +.+++.+.     ++++|+.+.+..++++++++++|
T Consensus        73 ~~~g~~l~~~~g~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~-----~~~~dl~~~~~~~~~~vi~~~~f  145 (389)
T 1n97_A           73 RLTGRGLLTDWGESWKEARKALKDPFLPKNVRGY-REAMEEEA-RAFFGEWR-----GEERDLDHEMLALSLRLLGRALF  145 (389)
T ss_dssp             HHHCSSTTTCCHHHHHHHHHHHCGGGSHHHHHTT-HHHHHHHH-HHHHHTCC-----SCCEEHHHHHHHHHHHHHHHHHH
T ss_pred             HHhCCccccCCcHHHHHHHHHhCcccCHHHHHHH-HHHHHHHH-HHHHHHcc-----CCcCcHHHHHHHHHHHHHHHHHc
Confidence            3446788889999999999999999999999888 78888887 66665554     46799999999999999999999


Q ss_pred             CCCCCCCCCCCccchHHHHHHHHHHHHHHhh-----hchhHHHHHHHHhhhchHHHHHHhhh-hc-----cCCchHHHHH
Q 047842          184 GIDPNYLSVEFPQTVYANAFNTMEQALLYRH-----IVPKICWKLQKWLQIGEEKKLSRAWK-LS-----IDSSTSFLRD  252 (465)
Q Consensus       184 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~p~~~~~~~~~~~~~~~~~~~~~~~-~~-----~dl~~~~i~~  252 (465)
                      |.+.+  +      .+.+.+..+........     .+|....   ..... ..+.+.+... .+     ..++++++.+
T Consensus       146 G~~~~--~------~~~~~~~~~~~~~~~~~~~~~~~~p~~~~---~~~~~-~~~~~~~~~~~~i~~rll~~l~~~~l~~  213 (389)
T 1n97_A          146 GKPLS--P------SLAEHALKALDRIMAQTRSPLALLDLAAE---ARFRK-DRGALYREAEALIVHPPLSHLPRERALS  213 (389)
T ss_dssp             SSCCC--H------HHHHHHHHHHHHHHHHHHCGGGGGCHHHH---HHHHH-HHHHHHHHHGGGTTSTTGGGSCHHHHHH
T ss_pred             CCcch--H------HHHHHHHHHHHHHHHHHhhHHHhcCCchh---HHHHH-HHHHHHHHHHHHHHHHhcccCCHHHHHH
Confidence            99876  1      34444444333221110     1111000   00000 0111111111 11     2489999999


Q ss_pred             HHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhHHHHHhhhCCCCC
Q 047842          253 TAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYLHAALCETLRLYP  332 (465)
Q Consensus       253 ~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p  332 (465)
                      +++.+++||+|||+++++|++++|++||++|+|+++|++ .+                          .|||+|+||++|
T Consensus       214 ~~~~~~~aG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~-~~--------------------------~a~i~E~lRl~p  266 (389)
T 1n97_A          214 EAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEE-AA--------------------------LAAFQEALRLYP  266 (389)
T ss_dssp             HHHHHHHHHSHHHHHHHHHHHHHHTTCHHHHHHHHHCHH-HH--------------------------HHHHHHHHHHSC
T ss_pred             HHHHHHHcCchhHHHHHHHHHHHHHcCHHHHHHHHHHHH-HH--------------------------HHHHHHHHhcCC
Confidence            999999999999999999999999999999999999998 43                          289999999999


Q ss_pred             CCcCcceeccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccccccCCCCCCCcC
Q 047842          333 PVPYNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKFTAFHAGPRNCLG  412 (465)
Q Consensus       333 ~~~~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G  412 (465)
                      +++...|.+ .+|+.++||.|||||.|.++.+++|||  +| +||++|+||||+++.    +..+..++|||+|+|.|+|
T Consensus       267 ~~~~~~R~~-~~d~~l~g~~Ip~Gt~V~~~~~~~~rd--~~-~dp~~F~PeR~l~~~----~~~~~~~~~FG~G~r~C~G  338 (389)
T 1n97_A          267 PAWILTRRL-ERPLLLGEDRLPPGTTLVLSPYVTQRL--HF-PDGEAFRPERFLEER----GTPSGRYFPFGLGQRLCLG  338 (389)
T ss_dssp             SSCCEEEEE-SSCEEETTEEECTTCEEEECHHHHHHH--SS-TTTTSCCTTHHHHSC----CCCBTTBCTTCCSTTCCTT
T ss_pred             Cccccceee-CCCceECCEEeCCCCEEEECHHHHhhh--cC-CCccccCCccCCCCC----CCCCCCccCCCCCCCCCch
Confidence            999875555 456666999999999999999999999  99 999999999998641    1234579999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhccEEEeecCCCccCcceEEeecCCCeeEEEEecC
Q 047842          413 KDKALIQMKMVASAVIGNYHVKVAKGHPVLPRKSIILNMKYGLKVQLSKRS  463 (465)
Q Consensus       413 ~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  463 (465)
                      ++||++|++++++.|+++|++++.++.+.  ..+.+..|.+++++++++|.
T Consensus       339 ~~lA~~e~~~~la~ll~~f~~~~~~~~~~--~~~~~~~p~~~~~v~~~~~~  387 (389)
T 1n97_A          339 RDFALLEGPIVLRAFFRRFRLDPLPFPRV--LAQVTLRPEGGLPARPREEV  387 (389)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCCCCCCCCE--EESSSEEETTCCEECCBC--
T ss_pred             HHHHHHHHHHHHHHHHHhceEEeCCCCcc--cceEEeeeCCCceEEEeecc
Confidence            99999999999999999999998766543  45667889889999999875


No 29 
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=100.00  E-value=2.6e-58  Score=442.09  Aligned_cols=382  Identities=14%  Similarity=0.172  Sum_probs=284.5

Q ss_pred             CCCCCcccchHHHhhcccchhHHHhHHHHhhcC-ceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCchh-hhhh
Q 047842           26 MRNWPVLGMLPGLLANTWYFHEFLAHDVLKKNR-GTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPDF-RMIM  103 (465)
Q Consensus        26 p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~kyg-~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~-~~~~  103 (465)
                      |++.|++||++.+..+   ++.++. ++++||| +||++   ++++.++|++++|+.++.++. + ..|.+...+ ....
T Consensus         5 ~Pg~P~lG~~~~~~~~---p~~~~~-~l~~~yg~pv~~~---~~~g~~~v~v~~~~~~~~l~~-~-~~~~~~~~~~~~~~   75 (417)
T 1izo_A            5 IPHDKSLDNSLTLLKE---GYLFIK-NRTERYNSDLFQA---RLLGKNFICMTGAEAAKVFYD-T-DRFQRQNALPKRVQ   75 (417)
T ss_dssp             -CBCCCTTHHHHHHHH---GGGHHH-HHHHHTTSSEEEE---EETTEEEEEECSHHHHHHHTC-T-TTEECTTCSCHHHH
T ss_pred             CCCCCccchHHHHhhC---cHHHHH-HHHHHhCCCeEEe---ecCCccEEEECCHHHHHHHhc-c-cccccccccccchh
Confidence            4445999999998754   788999 9999998 89998   777889999999999986654 3 345443222 2222


Q ss_pred             -cccC-CcccccCChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHHHHHHHHHHHHH
Q 047842          104 -EPLG-DGVLNADGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVLKRFAFDNICML  181 (465)
Q Consensus       104 -~~~~-~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~i~~~~  181 (465)
                       ...| .+++..+|+.|+++|+++++.|+...++.+ .+.+.+.+ +.+++.+..    ++++|+.+.+..+++++++++
T Consensus        76 ~~~~g~~~l~~~dg~~h~~~R~~~~~~f~~~~l~~~-~~~i~~~~-~~l~~~l~~----~~~~dl~~~~~~~~~~vi~~~  149 (417)
T 1izo_A           76 KSLFGVNAIQGMDGSAHIHRKMLFLSLMTPPHQKRL-AELMTEEW-KAAVTRWEK----ADEVVLFEEAKEILCRVACYW  149 (417)
T ss_dssp             TTTTCTTCGGGCCHHHHHHHHHHHHHTSSHHHHHHH-HHHHHHHH-HHHHHHHTT----SSEEEHHHHHHHHHHHHHHHH
T ss_pred             hhhccccceeecCChHHHHHHHHhhhhcCHHHHHHH-HHHHHHHH-HHHHHHHhc----CCCeeHHHHHHHHHHHHHHHH
Confidence             3445 578889999999999999999999999988 78888887 666665542    467999999999999999998


Q ss_pred             HhCCCCCCCCCCCccchHHHHHHHHHHHHHHhhhchh------HHHHHHHHhhhchHHHHHH------------hhhhc-
Q 047842          182 VLGIDPNYLSVEFPQTVYANAFNTMEQALLYRHIVPK------ICWKLQKWLQIGEEKKLSR------------AWKLS-  242 (465)
Q Consensus       182 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~~~~~~~~~~~~~~~~~~~------------~~~~~-  242 (465)
                       ||.+.+..+    ...+.+.+..+.....  ...|.      ....+..++....+++.+.            ..... 
T Consensus       150 -~G~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~d~l~~ll~~~~  222 (417)
T 1izo_A          150 -AGVPLKETE----VKERADDFIDMVDAFG--AVGPRHWKGRRARPRAEEWIEVMIEDARAGLLKTTSGTALHEMAFHTQ  222 (417)
T ss_dssp             -HTCCCCTTT----HHHHHHHHHHHHHHTT--CCSHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCTTSHHHHHHHCBC
T ss_pred             -cCCCCCchH----HHHHHHHHHHHHhhcc--cCCccchhHHHHHHHHHHHHHHHHHHHHhhccCCCcCCHHHHHHHhcc
Confidence             698765321    2233333322222110  01111      1111122222222221110            00000 


Q ss_pred             ---cCCchHHHHHHHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchh
Q 047842          243 ---IDSSTSFLRDTAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVY  319 (465)
Q Consensus       243 ---~dl~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  319 (465)
                         ..++++++...+..+ +||++||+++++|++++|++||++|+++++|.                          +||
T Consensus       223 ~~g~~l~~~~~~~~~~~~-~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~E~--------------------------~~~  275 (417)
T 1izo_A          223 EDGSQLDSRMAAIELINV-LRPIVAISYFLVFSALALHEHPKYKEWLRSGN--------------------------SRE  275 (417)
T ss_dssp             TTSCBCCHHHHHHHHHHH-HHHHHTHHHHHHHHHHHHHHSTHHHHHHHTCC--------------------------HHH
T ss_pred             ccCCCCCHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHhhCHHHHHHHHhcC--------------------------CHH
Confidence               025666666666554 58999999999999999999999999999861                          359


Q ss_pred             HHHHHhhhCCCCCCCcCcceeccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCcc
Q 047842          320 LHAALCETLRLYPPVPYNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYK  399 (465)
Q Consensus       320 l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~  399 (465)
                      ++|||+|+||++|+++...|.+.+ |+.++||.|||||.|+++.+++||||++| +||++|+|+||++++     ..+..
T Consensus       276 l~a~i~E~lRl~p~~~~~~R~~~~-d~~l~g~~ip~G~~v~~~~~~~~rdp~~~-~dp~~F~P~R~~~~~-----~~~~~  348 (417)
T 1izo_A          276 REMFVQEVRRYYPFGPFLGALVKK-DFVWNNCEFKKGTSVLLDLYGTNHDPRLW-DHPDEFRPERFAERE-----ENLFD  348 (417)
T ss_dssp             HHHHHHHHHHHSCCCCEEEEEECS-CEEETTEEECTTCEEEEEHHHHHTCTTTS-SSTTSCCGGGGTTCC-----CCSSS
T ss_pred             HHHHHHHHhhcCCcccccceeecC-CeeECCEEECCCCEEEecHHHhhcCcccc-CCccccChhhcCCCC-----CCCcc
Confidence            999999999999999986666655 55669999999999999999999999999 999999999999753     24567


Q ss_pred             ccccCCC----CCCCcChHHHHHHHHHHHHHHHhccEEEeecCCCccCcceEEeecCCCeeEEEEecC
Q 047842          400 FTAFHAG----PRNCLGKDKALIQMKMVASAVIGNYHVKVAKGHPVLPRKSIILNMKYGLKVQLSKRS  463 (465)
Q Consensus       400 ~~pFg~G----~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  463 (465)
                      ++|||+|    +|.|+|++||++|++++++.|+++|+|++.++........++..|++++++++++|+
T Consensus       349 ~~~FG~G~r~~~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~r~  416 (417)
T 1izo_A          349 MIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQSLHYSLARMPSLPESGFVMSGIRRK  416 (417)
T ss_dssp             CCTTCSSCTTSSSCCTTHHHHHHHHHHHHHHHHHTEEEECCSCCCCCCSSSSSCCCTTCCEEEEEEEC
T ss_pred             eeCCCCCCCCCCCcCCCHHHHHHHHHHHHHHHHHhCeEEeCCCCcCcccccCCCCCCCCceEeeeeCC
Confidence            9999999    599999999999999999999999999987653222223567789999999999996


No 30 
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=100.00  E-value=3.5e-58  Score=451.87  Aligned_cols=401  Identities=13%  Similarity=0.123  Sum_probs=286.1

Q ss_pred             CCCCCCCcccchHHHhhc--ccchhHHHhHHHHhhcCc-eEEEecccccccce-------EEecChhhHHHhHhcCC---
Q 047842           24 SPMRNWPVLGMLPGLLAN--TWYFHEFLAHDVLKKNRG-TFEFTGPWFAQMDL-------IITSDPMNVHYISSKNF---   90 (465)
Q Consensus        24 Pgp~~~p~~G~~~~~~~~--~~~~~~~~~~~~~~kyg~-v~~~~~~~~~~~~~-------vvv~~p~~v~~i~~~~~---   90 (465)
                      |||.++|++|+++++...  ..+++.++. ++++|||+ ||++   ++++.++       +++.+++..+.++....   
T Consensus        31 PGp~g~P~iG~~~~~~~~~~~~~~~~f~~-~~~~kyG~~Vf~~---~l~~~~~vv~~p~~v~~~~~~~~~~l~~~~~v~k  106 (495)
T 3dsk_A           31 PGNYGLPIVGPIKDRWDYFYDQGAEEFFK-SRIRKYNSTVYRV---NMPPGAFIAENPQVVALLDGKSFPVLFDVDKVEK  106 (495)
T ss_dssp             CCCCCSTTHHHHHHHHHHHTTSCHHHHHH-HHHHHHTCSEEEE---ECSCCTTTCSCCEEEEECSTTTGGGGGCTTTEEC
T ss_pred             CCCCCCCccchHHHHHHHHHhcCcHHHHH-HHHHHhCCceEee---cCCCCCCccCCCCEEEEeCCcceeeecccccccc
Confidence            899999999999887522  346888999 99999999 9999   8888887       66677776666665421   


Q ss_pred             -CCCCCCchhhhhhcccC----CcccccCChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCcccc
Q 047842           91 -SNYPKGPDFRMIMEPLG----DGVLNADGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVD  165 (465)
Q Consensus        91 -~~~~~~~~~~~~~~~~~----~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vd  165 (465)
                       ..+ ........ .+.|    .+++..+|+.|+++|+++.+.|+... ..+ .+.+++.+ +.+++.+.+...+++++|
T Consensus       107 ~~~~-~~~~~~~~-~l~g~~~~~~~~~~~g~~h~~~R~~~~~~f~~~~-~~~-~~~i~~~~-~~ll~~~~~~~~~~~~vd  181 (495)
T 3dsk_A          107 KDLL-TGTYMPST-ELTGGYRILSYLDPSEPKHEKLKNLLFFLLKSSR-NRI-FPEFQATY-SELFDSLEKELSLKGKAD  181 (495)
T ss_dssp             SSCT-TSSSCCCG-GGGTTCCCGGGCCTTSHHHHHHHHHHHHHHHHTT-TTH-HHHHHHHH-HHHHHHHHHHHHHHSSEE
T ss_pred             cccc-cccCCCCc-cccCCCcceeeeCCCchHHHHHHHHHHHHHHHHH-HHH-HHHHHHHH-HHHHHHHHHHhccCCCcc
Confidence             111 01111111 2233    34566799999999999999998754 555 67788776 556666654333456899


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCCCCCCCCccchHHHHHHHHHHHHHHhh---hchhHHHHHHHH-hh-------hchH--
Q 047842          166 LQDVLKRFAFDNICMLVLGIDPNYLSVEFPQTVYANAFNTMEQALLYRH---IVPKICWKLQKW-LQ-------IGEE--  232 (465)
Q Consensus       166 l~~~~~~~~~~i~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~p~~~~~~~~~-~~-------~~~~--  232 (465)
                      +.+.+..++++++++.+||.+.+..+.   ...+...............   .+|.....+... ..       ....  
T Consensus       182 l~~~~~~~~~~~i~~~~~G~~~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  258 (495)
T 3dsk_A          182 FGGSSDGTAFNFLARAFYGTNPADTKL---KADAPGLITKWVLFNLHPLLSIGLPRVIEEPLIHTFSLPPALVKSDYQRL  258 (495)
T ss_dssp             SHHHHHHHHHHHHHHHHHSCCGGGSTT---TTCHHHHHHHHHHHHHGGGCCCSSCHHHHHHHHSSSCCCGGGGHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCcchhhh---hhhHHHHHHHHHHHhhhhHhHhccHHHHHHHHHHhhcccchhhhhhHHHH
Confidence            999999999999999999998765432   2223333333222211111   223322222100 00       0000  


Q ss_pred             ---------HHHHHhhhhccCCchHHHHHHHHHHh-hcchhhHHHHHHHHHHHHhc-CchHHHHHHHHHHHhhhcccccc
Q 047842          233 ---------KKLSRAWKLSIDSSTSFLRDTAFSFL-GAGNDTISSGLVWFFWLVAT-HPSVENKILKEIKATIVMHKKEE  301 (465)
Q Consensus       233 ---------~~~~~~~~~~~dl~~~~i~~~~~~~~-~ag~~tt~~~l~~~l~~L~~-~p~~~~~l~~Ei~~~~~~~~~~~  301 (465)
                               ..++..  .-..++++++..+++.++ +||+|||+.+++|++++|+. ||++|++|++|++ .+.+..+. 
T Consensus       259 ~~~~~~~~~~ll~~~--~~~~l~~~ei~~~~~~~l~~ag~~tt~~~l~~~l~~L~~~~P~~~~~lr~Ei~-~~~~~~~~-  334 (495)
T 3dsk_A          259 YEFFLESAGEILVEA--DKLGISREEATHNLLFATCFNTWGGMKILFPNMVKRIGRAGHQVHNRLAEEIR-SVIKSNGG-  334 (495)
T ss_dssp             HHHHHHHCHHHHHHH--HHTTCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH-HHHHHTTT-
T ss_pred             HHHHHHHHHHHHHHH--HhCCCCHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCHHHHHHHHHHHH-HHhccCCC-
Confidence                     111111  112578999998766665 99999999999999999995 9999999999999 88764321 


Q ss_pred             CcccccccChhhhccchhHHHHHhhhCCCCCCCcCcceeccCccccC---CCeeeCCCCEEEEeecccccCCCCcCCCCC
Q 047842          302 DGERRFFFNTKQANNLVYLHAALCETLRLYPPVPYNHKIAGQADILP---SGHHIKKNQTVLISYYAMGRMEEIWGNDCL  378 (465)
Q Consensus       302 ~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~---~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~  378 (465)
                            .++++++.+||||+|||+|+||++|+++...|++.+|.++.   +||.||||+.|+++.+++||||++| +||+
T Consensus       335 ------~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~a~~d~~l~~~~~g~~IpkG~~v~~~~~~~~~dp~~~-~dp~  407 (495)
T 3dsk_A          335 ------ELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIF-DRAD  407 (495)
T ss_dssp             ------CCCHHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEEECSSCEEEECTTCEEEEEHHHHHTCTTTS-TTTT
T ss_pred             ------CCCHHHHhcCHHHHHHHHHHHhcCCCccccceeecCCeEeccCCCceEECCCCEEEeccHHhhCCcccC-CCcc
Confidence                  78999999999999999999999999999988876654443   5999999999999999999999999 9999


Q ss_pred             CcCCCCCCCCCCcccc-----cCCccccccCCCCCCCcChHHHHHHHHHHHHHHHhccEEEeecCCCccCcceE
Q 047842          379 EFKPERWISEKGCIVH-----VPTYKFTAFHAGPRNCLGKDKALIQMKMVASAVIGNYHVKVAKGHPVLPRKSI  447 (465)
Q Consensus       379 ~F~P~Rfl~~~~~~~~-----~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~  447 (465)
                      +|+|+||+++++....     +....++|||+|+|.|||++||.+|++++++.|+++|++...++.+..+..+.
T Consensus       408 ~F~P~Rfl~~~~~~~~~~~~fg~G~~~~~fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~  481 (495)
T 3dsk_A          408 EFVPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDSFDIEVGTSPLGSSV  481 (495)
T ss_dssp             SCCTTTTCHHHHHHGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEEEEEEEEEECSSSEEE
T ss_pred             ccCCcccCCCCccchhhcccccCCcCcCCCCCCCCcCchHHHHHHHHHHHHHHHHHHCceEeCCCCCccccccc
Confidence            9999999975311100     01113455555669999999999999999999999999887654333333333


No 31 
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=100.00  E-value=2.2e-58  Score=440.09  Aligned_cols=369  Identities=14%  Similarity=0.108  Sum_probs=274.2

Q ss_pred             CCCCCCCcccchHHHhhcccchhHHHhHHHHhhcCceEEEeccc----c-cc-cceEEecChhhHHHhH-hcCCCCCCCC
Q 047842           24 SPMRNWPVLGMLPGLLANTWYFHEFLAHDVLKKNRGTFEFTGPW----F-AQ-MDLIITSDPMNVHYIS-SKNFSNYPKG   96 (465)
Q Consensus        24 Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~kyg~v~~~~~~~----~-~~-~~~vvv~~p~~v~~i~-~~~~~~~~~~   96 (465)
                      |||+++|+.     +.   .+++.++. ++ ++||+||++   +    + |+ .++|+++||+.+++++ .++  .+.++
T Consensus        13 pgp~~~p~~-----~~---~~p~~~~~-~l-~~yGpv~~~---~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~--~~~~~   77 (406)
T 1ued_A           13 REPANFQLR-----TN---CDPHEDNF-GL-RAHGPLVRI---VGESSTQLGRDFVWQAHGYEVVRRILGDHE--HFTTR   77 (406)
T ss_dssp             ECCTTTTCE-----ET---TEECHHHH-HH-HTTCSEEEE---ESHHHHHTTSSCEEEECSHHHHHHHHHCCS--SEECC
T ss_pred             ccCcccCCC-----CC---CCcHHHHH-HH-HHhCCeeee---cccccCCCCCccEEEEcCHHHHHHHHhhCc--ccccc
Confidence            689999987     22   24777888 89 999999999   7    5 77 8999999999999999 543  24443


Q ss_pred             ch--hh--hhhc--ccCCcccccCChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHH
Q 047842           97 PD--FR--MIME--PLGDGVLNADGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVL  170 (465)
Q Consensus        97 ~~--~~--~~~~--~~~~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~  170 (465)
                      +.  +.  ....  ..+.+++..+|+.|+++|+++++.|+...++.+ .+.+++.+ +.+++.+..   .++++|+.+.+
T Consensus        78 ~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~---~g~~~d~~~~~  152 (406)
T 1ued_A           78 PQFTQSKSGAHVEAQFVGQISTYDPPEHTRLRKMLTPEFTVRRIRRM-EPAIQSLI-DDRLDLLEA---EGPSADLQGLF  152 (406)
T ss_dssp             CCC---------CGGGTTCGGGCCTTHHHHHHHHHGGGSSHHHHHHH-HHHHHHHH-HHHHHHHHH---HCTTEEHHHHT
T ss_pred             ccccccccccccccccccccccCCCHHHHHHHHHhhhhhCHHHHHHH-HHHHHHHH-HHHHHHHHh---cCCCeeHHHHH
Confidence            32  11  1111  134578889999999999999999999999888 78888887 666666652   35679999988


Q ss_pred             HH-HHHHHHHHHHhCCCCCCCCCCCccchHHHHHHHHHHHHHHhhhchhHHHHHHHHhhhchHHHHHH--------hhhh
Q 047842          171 KR-FAFDNICMLVLGIDPNYLSVEFPQTVYANAFNTMEQALLYRHIVPKICWKLQKWLQIGEEKKLSR--------AWKL  241 (465)
Q Consensus       171 ~~-~~~~i~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~--------~~~~  241 (465)
                      .. +++++++. +||.+.+.      ...+......+................+..++....+++.+.        ....
T Consensus       153 ~~~~~~~vi~~-~~G~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~  225 (406)
T 1ued_A          153 ADPVGAHALCE-LLGIPRDD------QREFVRRIRRNADLSRGLKARAADSAAFNRYLDNLLARQRADPDDGLLGMIVRD  225 (406)
T ss_dssp             HHHHHHHHHHH-HHTCCHHH------HHHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHH
T ss_pred             HHHhHHHHHHH-HcCCCHHH------HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHh
Confidence            75 99999995 69986431      122333332222100000000000111112221111111110        0000


Q ss_pred             -ccCCchHHHHHHHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhH
Q 047842          242 -SIDSSTSFLRDTAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYL  320 (465)
Q Consensus       242 -~~dl~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l  320 (465)
                       -..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++                           |+
T Consensus       226 ~~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~---------------------------~l  278 (406)
T 1ued_A          226 HGDNVTDEELKGLCTALILGGVETVAGMIGFGVLALLDNPGQIELLFESPE---------------------------KA  278 (406)
T ss_dssp             HGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGTTHHHHCHH---------------------------HH
T ss_pred             cCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhChHHHHHHHhCHH---------------------------HH
Confidence             12479999999999999999999999999999999999999999999987                           68


Q ss_pred             HHHHhhhCCCCCCCcCcceeccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccc
Q 047842          321 HAALCETLRLYPPVPYNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKF  400 (465)
Q Consensus       321 ~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~  400 (465)
                      +|||+|+||++|+++...+|.+.+|+.++||.|||||.|+++.+++||||++| +||++|+||||-           ..+
T Consensus       279 ~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~~-----------~~~  346 (406)
T 1ued_A          279 ERVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALT-PDPDVLDANRAA-----------VSD  346 (406)
T ss_dssp             HHHHHHHHHHHCSSCSCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTSCC-----------CCC
T ss_pred             HHHHHHHHhcCCCcccCcceecCCCEEECCEEECCCCEEEecHHHhcCCchhC-CChhhcCCCCCC-----------CCC
Confidence            99999999999999974444444566679999999999999999999999999 999999999981           358


Q ss_pred             cccCCCCCCCcChHHHHHHHHHHHHHHHhcc-EEEeecC-CCccCcceEEeecCCCeeEEE
Q 047842          401 TAFHAGPRNCLGKDKALIQMKMVASAVIGNY-HVKVAKG-HPVLPRKSIILNMKYGLKVQL  459 (465)
Q Consensus       401 ~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  459 (465)
                      +|||+|+|.|+|++||++|++++++.|+++| ++++.++ .++.+..+.+.++ .+++|++
T Consensus       347 ~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~-~~lpv~~  406 (406)
T 1ued_A          347 VGFGHGIHYCVGAALARSMLRMAYQTLWRRFPGLRLAVPIEEVKYRSAFVDCP-DQVPVTW  406 (406)
T ss_dssp             CTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCCSSSCCB-SCCEEEC
T ss_pred             CCCCCCCcCCCcHHHHHHHHHHHHHHHHHhCCCceecCCcccccccccccccC-CeeeeeC
Confidence            9999999999999999999999999999999 7999743 3455666677788 8888864


No 32 
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=100.00  E-value=5.2e-57  Score=441.19  Aligned_cols=394  Identities=11%  Similarity=0.071  Sum_probs=277.9

Q ss_pred             CCCCCCCcccchHHHhhc--cc-chhHHHhHHHHhhcCc-eEEEeccccccc-------ceEEecChhhHHHhHhcC---
Q 047842           24 SPMRNWPVLGMLPGLLAN--TW-YFHEFLAHDVLKKNRG-TFEFTGPWFAQM-------DLIITSDPMNVHYISSKN---   89 (465)
Q Consensus        24 Pgp~~~p~~G~~~~~~~~--~~-~~~~~~~~~~~~kyg~-v~~~~~~~~~~~-------~~vvv~~p~~v~~i~~~~---   89 (465)
                      |||.++|++|++..+...  .. +++.++. ++++|||+ ||++   ++++.       ..|++.+....+.++...   
T Consensus        12 PGp~g~P~iG~~~~~~~~~~~~g~~~~~~~-~~~~kyG~~vf~~---~~~~~~~v~~~~~~v~~~~~~~~~~~~~~~~~~   87 (473)
T 3dan_A           12 PGSYGIPFFQPIKDRLEYFYGTGGRDEYFR-SRMQKYQSTVFRA---NMPPGPFVSSNPKVIVLLDAKSFPILFDVSKVE   87 (473)
T ss_dssp             CCCCCSTTHHHHHHHHHHHHSTTHHHHHHH-HHHHHHTCSEEEE---ECTTCTTTCSCCEEEEECSTTTGGGGGCTTTEE
T ss_pred             CCCCCCcchhhHHHHHHHHHhhcCchHHHH-hHHHHhCCeEEEe---cCCCCCccccCCceEEeecccccceecCCccee
Confidence            999999999999987532  34 6788999 99999999 9999   66533       344445555444444311   


Q ss_pred             -CCCCCCC-chhhhhh-cccCCcccccCChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccH
Q 047842           90 -FSNYPKG-PDFRMIM-EPLGDGVLNADGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDL  166 (465)
Q Consensus        90 -~~~~~~~-~~~~~~~-~~~~~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl  166 (465)
                       ...+... +...... .....+++..+|+.|+++|+++.+.|+.. +..+ .+.+++.+ +.+++.+.....+++++|+
T Consensus        88 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~h~~~R~~~~~~f~~~-~~~~-~~~i~~~~-~~ll~~~~~~~~~~~~vdl  164 (473)
T 3dan_A           88 KKDLFTGTYMPSTKLTGGYRVLSYLDPSEPRHAQLKNLLFFMLKNS-SNRV-IPQFETTY-TELFEGLEAELAKNGKAAF  164 (473)
T ss_dssp             CSSCTTSSSCCCGGGGTTSCCGGGCCTTSHHHHHHHHHHHHHHHHH-HHHH-HHHHHHHH-HHHHHHHHHHHHHHSCEEC
T ss_pred             ccccccccccCCccccCCCcceeeeCCCcHHHHHHHHHHHHHHHHH-HHHH-HHHHHHHH-HHHHHHHHHHhccCCcccH
Confidence             0111110 0000111 11123467789999999999999999994 7776 78888887 6666666543334568999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCCCCCCCCccchHHHHHHHHHHHHHHhh---hchhHHHHHHHHh--------hhchH---
Q 047842          167 QDVLKRFAFDNICMLVLGIDPNYLSVEFPQTVYANAFNTMEQALLYRH---IVPKICWKLQKWL--------QIGEE---  232 (465)
Q Consensus       167 ~~~~~~~~~~i~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~p~~~~~~~~~~--------~~~~~---  232 (465)
                      .+++..++++++++++||.+.+..+   ....+...............   .+|.....+....        ....+   
T Consensus       165 ~~~~~~~~~~~i~~~~~G~~~~~~~---~~~~~~~~~~~~~~~~~~p~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (473)
T 3dan_A          165 NDVGEQAAFRFLGRAYFNSNPEETK---LGTSAPTLISSWVLFNLAPTLDLGLPWFLQEPLLHTFRLPAFLIKSTYNKLY  241 (473)
T ss_dssp             HHHHHHHHHHHHHHHHHSCCGGGST---TTTCHHHHHHHHHHHHHGGGCCCSCCHHHHHHHHSSSCCCGGGTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCCCchh---hhhhHHHHHHHHHHHhccchhhhcchHHHHHHHhhhccchHhhhhhchhhhH
Confidence            9999999999999999999887622   22223332222221111111   2232222221000        00000   


Q ss_pred             --------HHHHHhhhhccCCchHHHHHHHHHHh-hcchhhHHHHHHHHHHHHhc-CchHHHHHHHHHHHhhhcc-cccc
Q 047842          233 --------KKLSRAWKLSIDSSTSFLRDTAFSFL-GAGNDTISSGLVWFFWLVAT-HPSVENKILKEIKATIVMH-KKEE  301 (465)
Q Consensus       233 --------~~~~~~~~~~~dl~~~~i~~~~~~~~-~ag~~tt~~~l~~~l~~L~~-~p~~~~~l~~Ei~~~~~~~-~~~~  301 (465)
                              ..++...+  ..++++++.++++.++ ++|++||+++++|++++|++ ||++|++|++|++ .+.+. .+. 
T Consensus       242 ~~~~~~~~~ll~~~~~--~~l~~~ei~~~~l~~~g~~~~~tta~~l~~~l~~L~~~~P~~~~~lr~Ei~-~~~~~~~~~-  317 (473)
T 3dan_A          242 DYFQSVATPVMEQAEK--LGVPKDEAVHNILFAVCFNTFGGVKILFPNTLKWIGLAGENLHTQLAEEIR-GAIKSYGDG-  317 (473)
T ss_dssp             HHHHHHCHHHHHHHHH--HTCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH-HHHHHHSTT-
T ss_pred             HHHHHHHHHHHHhHhh--cCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhcCHHHHHHHHHHHH-HHhhcccCC-
Confidence                    01111111  2689999998887666 88999999999999999999 7999999999999 87654 221 


Q ss_pred             CcccccccChhhhccchhHHHHHhhhCCCCCCCcCcceeccCccccC----CCeeeCCCCEEEEeecccccCCCCcCCCC
Q 047842          302 DGERRFFFNTKQANNLVYLHAALCETLRLYPPVPYNHKIAGQADILP----SGHHIKKNQTVLISYYAMGRMEEIWGNDC  377 (465)
Q Consensus       302 ~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~----~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p  377 (465)
                            .++.+++.+||||+|||+|+||++|+++...|++++ |+.+    +||.||||+.|+++.+++||||++| +||
T Consensus       318 ------~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~-d~~l~~~~~g~~Ip~G~~v~~~~~~~~~dp~~~-~dp  389 (473)
T 3dan_A          318 ------NVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKS-NFTIESHDATFEVKKGEMLFGYQPFATKDPKVF-DRP  389 (473)
T ss_dssp             ------SCCHHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESS-CEEEECSSCEEEECTTCEEEEEHHHHTTCTTTS-SST
T ss_pred             ------CCCHHHHhcCchHHHHHHHHHhcCCCcccccccccC-CcEeecCCCceEeCCCCEEEechHHhhCCchhc-CCc
Confidence                  789999999999999999999999999998888655 5666    8999999999999999999999999 999


Q ss_pred             CCcCCCCCCCCCCcccc----cCCccccccCCCCCCCcChHHHHHHHHHHHHHHHhccEEEeecCC
Q 047842          378 LEFKPERWISEKGCIVH----VPTYKFTAFHAGPRNCLGKDKALIQMKMVASAVIGNYHVKVAKGH  439 (465)
Q Consensus       378 ~~F~P~Rfl~~~~~~~~----~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~  439 (465)
                      ++|+|+||+++..+...    +....+++||+|+|.|||++||.+|++++++.|+++|++...++.
T Consensus       390 ~~F~p~R~~~~~~~~~~~~~fg~G~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~  455 (473)
T 3dan_A          390 EEYVPDRFVGDGEALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRYDSFEIELG  455 (473)
T ss_dssp             TSCCTTTTSGGGGGGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             ccCCccccCCCcccccccceecCCcCcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCeEEccCC
Confidence            99999999976211000    011124445555599999999999999999999999997765543


No 33 
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=100.00  E-value=3.3e-58  Score=439.56  Aligned_cols=354  Identities=16%  Similarity=0.134  Sum_probs=263.6

Q ss_pred             CCCCCCCcccchHHHhhcccchhHHHhHHHHhhcCceEEEeccccc-ccceEEecChhhHHHhHhcCC-CCCCCCchhhh
Q 047842           24 SPMRNWPVLGMLPGLLANTWYFHEFLAHDVLKKNRGTFEFTGPWFA-QMDLIITSDPMNVHYISSKNF-SNYPKGPDFRM  101 (465)
Q Consensus        24 Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~kyg~v~~~~~~~~~-~~~~vvv~~p~~v~~i~~~~~-~~~~~~~~~~~  101 (465)
                      |||+++|++|++..      +++..+. +++ +||+||++   .++ +.+.++|++++.+++++.++. ..+..++.+..
T Consensus         4 PGp~~~P~~g~~~~------~p~~~~~-~l~-~~Gpv~~~---~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~   72 (404)
T 1jfb_A            4 SGAPSFPFSRASGP------EPPAEFA-KLR-ATNPVSQV---KLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPE   72 (404)
T ss_dssp             --CCBSSCCCSSTT------SCCTHHH-HHH-HHCSEEEE---ECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCC
T ss_pred             CCCCCCCCCCCcCC------CccHHHH-HHH-HhCCeeee---ecCCCCceEEEecHHHHHHHHcCCcccccccccCCcc
Confidence            89999999999874      3677788 885 69999988   543 567788999999999998751 22222221111


Q ss_pred             ---h--h-cccCCcccccCChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHHHHHHH
Q 047842          102 ---I--M-EPLGDGVLNADGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVLKRFAF  175 (465)
Q Consensus       102 ---~--~-~~~~~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~  175 (465)
                         .  . ...+.+++..+|+.|+++|+++++.|+...++.+ .+.+++.+ +.+++.+.+...+++++|+...+...+.
T Consensus        73 ~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~~~~~~~~~d~~~~~~~~~~  150 (404)
T 1jfb_A           73 LSASGKQAAKAKPTFVDMDPPEHMHQRSMVEPTFTPEAVKNL-QPYIQRTV-DDLLEQMKQKGCANGPVDLVKEFALPVP  150 (404)
T ss_dssp             CSHHHHHHTTSCCCGGGCCTTHHHHHHTTTGGGGSHHHHHHH-HHHHHHHH-HHHHHHHHHHCSTTSCEEHHHHTTTHHH
T ss_pred             ccccccchhcccCcccccCchhHHHHHHHhhhhcCHHHHHHH-HHHHHHHH-HHHHHHHHhcCCCCCCccHHHHHHHHHH
Confidence               0  0 1113468889999999999999999999999988 78888887 6777777654334567999999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCCccchHHHHHHHHHHHHHHhhhch----hHHHHHHHHhhhchHHHHH--------Hhh---h
Q 047842          176 DNICMLVLGIDPNYLSVEFPQTVYANAFNTMEQALLYRHIVP----KICWKLQKWLQIGEEKKLS--------RAW---K  240 (465)
Q Consensus       176 ~i~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----~~~~~~~~~~~~~~~~~~~--------~~~---~  240 (465)
                      ++++..+||.+.+.       ..+.......   .......+    .....+..++....+++.+        ...   .
T Consensus       151 ~~i~~~~~G~~~~~-------~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~  220 (404)
T 1jfb_A          151 SYIIYTLLGVPFND-------LEYLTQQNAI---RTNGSSTAREASAANQELLDYLAILVEQRLVEPKDDIISKLCTEQV  220 (404)
T ss_dssp             HHHHHHHHTCCGGG-------HHHHHHHHHH---HHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHTT
T ss_pred             HHHHHHHcCCCHHH-------HHHHHHHHHH---HhccCcchHHHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHhhc
Confidence            99999999987642       1111111111   10000000    0011111222211111111        001   0


Q ss_pred             hccCCchHHHHHHHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhH
Q 047842          241 LSIDSSTSFLRDTAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYL  320 (465)
Q Consensus       241 ~~~dl~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l  320 (465)
                      .-..++++++.+++..+++||+|||+++++|++++|++||++|+|++++.                           +|+
T Consensus       221 ~~~~l~~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~~~---------------------------~yl  273 (404)
T 1jfb_A          221 KPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANP---------------------------SLA  273 (404)
T ss_dssp             TTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHCG---------------------------GGH
T ss_pred             cCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHhCh---------------------------HhH
Confidence            11247999999999999999999999999999999999999999998831                           399


Q ss_pred             HHHHhhhCCCCCCCcCcceeccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccc
Q 047842          321 HAALCETLRLYPPVPYNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKF  400 (465)
Q Consensus       321 ~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~  400 (465)
                      +|||+|+||++|+++...+|.+.+|+.++||.|||||.|+++.+++||||++| +||++|+||||+++         ..+
T Consensus       274 ~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeRf~~~---------~~~  343 (404)
T 1jfb_A          274 PQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVF-ENPDEFNMNRKWPP---------QDP  343 (404)
T ss_dssp             HHHHHHHHHHSCSCCSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCCCCS---------SCC
T ss_pred             HHHHHHHHhhCCCccccceeeeCCCeeECCEEECCCCEEEeCHHhhCCCchhC-CChhhcCCCCCCCC---------CCC
Confidence            99999999999999955455555567779999999999999999999999999 99999999999753         138


Q ss_pred             cccCCCCCCCcChHHHHHHHHHHHHHHHhcc-EEEeec
Q 047842          401 TAFHAGPRNCLGKDKALIQMKMVASAVIGNY-HVKVAK  437 (465)
Q Consensus       401 ~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~  437 (465)
                      +|||+|+|.|+|++||++|++++++.|+++| ++++.+
T Consensus       344 ~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~  381 (404)
T 1jfb_A          344 LGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAV  381 (404)
T ss_dssp             CTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCTTCEESS
T ss_pred             CCCCCCCccCCCHHHHHHHHHHHHHHHHHHCCCceecC
Confidence            9999999999999999999999999999999 799864


No 34 
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=100.00  E-value=6.5e-58  Score=439.07  Aligned_cols=380  Identities=16%  Similarity=0.168  Sum_probs=280.7

Q ss_pred             CCCCCcccchHHHhhcccchhHHHhHHHHhhc-CceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCchhh-hhh
Q 047842           26 MRNWPVLGMLPGLLANTWYFHEFLAHDVLKKN-RGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPDFR-MIM  103 (465)
Q Consensus        26 p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~ky-g~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~~-~~~  103 (465)
                      |++.|++||++.+..+   ++.++. +++++| ||||++   .+++.+++++++|+.++ ++.++ ..|++...+. ...
T Consensus         4 pPg~P~iG~~~~~~~~---p~~~~~-~l~~~y~gpv~~~---~~~g~~~~vv~~~~~~~-~l~~~-~~f~~~~~~~~~~~   74 (415)
T 3awm_A            4 TPHTKGPDETLSLLAD---PYRFIS-RQCQRLGANAFES---RFLLKKTNCLKGAKAAE-IFYDT-TRFEREGAMPVAIQ   74 (415)
T ss_dssp             -----CCCCHHHHHHS---TTTHHH-HHHHHHTSSEEEE---EETTEEEEEEESHHHHH-HHTCT-TTEECTTCSCHHHH
T ss_pred             CCCCCccchHHHHHhC---hHHHHH-HHHHHhCCCeEEE---ecCCCcEEEEeCHHHHH-HHhcc-cccccccccchhhh
Confidence            4445999999998754   788999 999999 799998   66777899999999986 66654 4565543222 122


Q ss_pred             -cccC-CcccccCChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHHHHHHHHHHHHH
Q 047842          104 -EPLG-DGVLNADGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVLKRFAFDNICML  181 (465)
Q Consensus       104 -~~~~-~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~i~~~~  181 (465)
                       ...| .+++..+|+.|+++|+++.+.|+...++.+ .+.+++.+ +.+++.+..    ++++|+.+.+..+++++++++
T Consensus        75 ~~~~g~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~ll~~~~~----~~~vdl~~~~~~~~~~vi~~~  148 (415)
T 3awm_A           75 KTLLGQGGVQGLDGETHRHRKQMFMGLMTPERVRAL-AQLFEAEW-RRAVPGWTR----KGEIVFYDELHEPLTRAVCAW  148 (415)
T ss_dssp             TTTSCSSSGGGCCHHHHHHHHHHHHTTCCHHHHHHH-HHHHHHHH-HHHHHHHHH----HSEEEHHHHHHHHHHHHHHHH
T ss_pred             hhccCCcceeecCcHHHHHHHHHHHHhcCHHHHHHH-HHHHHHHH-HHHHHhhcc----CCcEeHHHHHHHHHHHHHHHH
Confidence             3345 578889999999999999999999999988 78888887 666666543    347999999999999999999


Q ss_pred             HhCCCCCCCCCCCccchHHHHHHHHHHHHHHhhhchh------HHHHHHHHhhhchHHHHHH------------hhhhc-
Q 047842          182 VLGIDPNYLSVEFPQTVYANAFNTMEQALLYRHIVPK------ICWKLQKWLQIGEEKKLSR------------AWKLS-  242 (465)
Q Consensus       182 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~~~~~~~~~~~~~~~~~~~------------~~~~~-  242 (465)
                       ||.+.+..+    ...+.+.+..+....  ....|.      ....+..++....+++.+.            ..... 
T Consensus       149 -~G~~~~~~~----~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~d~l~~ll~~~~  221 (415)
T 3awm_A          149 -AGVPLPDDE----AGNRAGELRALFDAA--GSASPRHLWSRLARRRVDAWAKRIIEGIRAGSIGSGSGTAAYAIAWHRD  221 (415)
T ss_dssp             -HTCCCCGGG----HHHHHHHHHHHHHST--TCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCCCTTSHHHHHHHCBC
T ss_pred             -cCCCCCcch----HHHHHHHHHHHHHHh--cccCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHhhhh
Confidence             898765321    122222222222110  000111      1111222222222221110            00000 


Q ss_pred             ---cCCchHHHHHHHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchh
Q 047842          243 ---IDSSTSFLRDTAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVY  319 (465)
Q Consensus       243 ---~dl~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  319 (465)
                         ..++++++...+..+ +||++||+++++|++++|++||++|+++++|.                           ||
T Consensus       222 ~~g~~~~~~~~~~~~~~~-~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~e~---------------------------~~  273 (415)
T 3awm_A          222 RHDDLLSPHVAAVELVNV-LRPTVAIAVYITFVAHALQTCSGIRAALVQQP---------------------------DY  273 (415)
T ss_dssp             TTSCBCCHHHHHHHHHHH-HHHHHTHHHHHHHHHHHHHHSTTHHHHHHHCT---------------------------TH
T ss_pred             ccCCCCCHHHHHHHHHHH-HHhhhhHHHHHHHHHHHHHhChHHHHHHHHHH---------------------------HH
Confidence               025677777666655 49999999999999999999999999999863                           49


Q ss_pred             HHHHHhhhCCCCCCCcCcceeccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCcc
Q 047842          320 LHAALCETLRLYPPVPYNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYK  399 (465)
Q Consensus       320 l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~  399 (465)
                      ++|||+|+||++|+++...|.+.+ |+.++||.||||+.|+++.+++||||++| +||++|+|+||++.+     ..+..
T Consensus       274 l~a~i~E~lRl~p~~~~~~R~~~~-d~~l~G~~ip~G~~V~~~~~~~~rdp~~~-~dp~~F~P~R~~~~~-----~~~~~  346 (415)
T 3awm_A          274 AELFVQEVRRFYPFFPAVVARASQ-DFEWEGMAFPEGRQVVLDLYGSNHDAATW-ADPQEFRPERFRAWD-----EDSFN  346 (415)
T ss_dssp             HHHHHHHHHHHSCCSCEEEEEESS-CEEETTEEECTTCEEEEEHHHHHTCHHHH-SSTTSCCGGGGGGCC-----CCSSS
T ss_pred             HHHHHHHHhhcCCCccccceeecC-CeEECCEEECCCCEEEeCchhhcCCcccc-CCccccChhhcCCCC-----CCCCC
Confidence            999999999999999986666654 56669999999999999999999999999 999999999999753     23567


Q ss_pred             ccccCCC----CCCCcChHHHHHHHHHHHHHHHhccEEEeecCCCccCcceEEeecCCCeeEEEEec
Q 047842          400 FTAFHAG----PRNCLGKDKALIQMKMVASAVIGNYHVKVAKGHPVLPRKSIILNMKYGLKVQLSKR  462 (465)
Q Consensus       400 ~~pFg~G----~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  462 (465)
                      ++|||+|    +|.|+|++||++|++++++.|+++|+|+++++........+++.|+++++++++++
T Consensus       347 ~~~FG~G~r~~~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  413 (415)
T 3awm_A          347 FIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQDLSIDFARLPALPKSGFVMRNVHI  413 (415)
T ss_dssp             CCTTCCSCTTTSCCCTTHHHHHHHHHHHHHHHHHTCEEECCSCCCCBCTTSSSCCBTTCCEEEEEES
T ss_pred             ccCCCCCCCCCCCcCchHHHHHHHHHHHHHHHHHhcEEEeCCCCCCcCcCCCccccCCCceEEEEeC
Confidence            9999999    59999999999999999999999999998765322223457778999999999875


No 35 
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=100.00  E-value=1.2e-56  Score=428.12  Aligned_cols=369  Identities=16%  Similarity=0.195  Sum_probs=276.0

Q ss_pred             CCCCCCCcccchHHHhhcccchhHHHhHHHHhhcCceEEEecccc-cccc-eEEecChhhHHHhHhcCCCCCCCCchhhh
Q 047842           24 SPMRNWPVLGMLPGLLANTWYFHEFLAHDVLKKNRGTFEFTGPWF-AQMD-LIITSDPMNVHYISSKNFSNYPKGPDFRM  101 (465)
Q Consensus        24 Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~kyg~v~~~~~~~~-~~~~-~vvv~~p~~v~~i~~~~~~~~~~~~~~~~  101 (465)
                      |||+++|+.++..      .+++.++. +++ +||+||++   ++ ++.+ +|+|+||+.+++++.+  ..|.+++....
T Consensus        11 ~~~~~~p~~~~~~------~~p~~~~~-~l~-~~Gpv~~~---~~~~g~~p~~vv~~~~~v~~vl~~--~~f~~~~~~~~   77 (406)
T 1s1f_A           11 PPVRDWPAVDLPG------SDFDPVLT-ELM-REGPVTRI---SLPNGEGWAWLVTRHDDVRLVTND--PRFGREAVMDR   77 (406)
T ss_dssp             CCEEECCCCCCCT------TCCCHHHH-HHH-HHCSEEEE---ECSBSBSCEEEECSHHHHHHHHTC--TTEESTTTTTT
T ss_pred             cCCCCCCCCcccc------cCchHHHH-HHH-hcCCeeee---ccCCCcccEEEEcCHHHHHHHHcC--CCccCCcCCCC
Confidence            7888888887722      24777888 875 79999998   64 5555 9999999999999986  35666543321


Q ss_pred             h---h-c-c--cCCcccccCChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHH-HHH
Q 047842          102 I---M-E-P--LGDGVLNADGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVL-KRF  173 (465)
Q Consensus       102 ~---~-~-~--~~~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~  173 (465)
                      .   . . .  .+.++++.+|+.|+++|+++++.|+...++.+ .+.+.+.+ +.+++.+.+   .++++|+...+ ..+
T Consensus        78 ~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~---~~~~~d~~~~~~~~~  152 (406)
T 1s1f_A           78 QVTRLAPHFIPARGAVGFLDPPDHTRLRRSVAAAFTARGVERV-RERSRGML-DELVDAMLR---AGPPADLTEAVLSPF  152 (406)
T ss_dssp             TBCBSSSSCSSCTTSGGGCCTTHHHHHHHHHHHHHSHHHHHHH-HHHHHHHH-HHHHHHHHH---HCSSEEHHHHTTTHH
T ss_pred             CcccccccccccccccccCCchHHHHHHHHHHHhhCHHHHHHH-HHHHHHHH-HHHHHHHHh---cCCCccHHHHHhhHh
Confidence            1   1 1 2  25778889999999999999999999999888 78888887 666666653   24579998766 479


Q ss_pred             HHHHHHHHHhCCCCCCCCCCCccchHHHHHHHHHHHHHHhhhchhHHHHHHHHhhhch------------HHHHHHhhhh
Q 047842          174 AFDNICMLVLGIDPNYLSVEFPQTVYANAFNTMEQALLYRHIVPKICWKLQKWLQIGE------------EKKLSRAWKL  241 (465)
Q Consensus       174 ~~~i~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~------------~~~~~~~~~~  241 (465)
                      ++++++. +||.+.+.      ...+......+................+..++....            ...++. ...
T Consensus       153 ~~~vi~~-~~G~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~-~~~  224 (406)
T 1s1f_A          153 PIAVICE-LMGVPATD------RHSMHTWTQLILSSSHGAEVSERAKNEMNAYFSDLIGLRSDSAGEDVTSLLGAA-VGR  224 (406)
T ss_dssp             HHHHHHH-HHTCCGGG------HHHHHHHHHHHHHHHTTCCCCHHHHTHHHHHHHHHHHTSCCSCCCSHHHHHHHH-HHT
T ss_pred             HHHHHHH-HhCCCHHH------HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHh-hcc
Confidence            9999999 59987642      223333333332211000000000111111111111            111111 111


Q ss_pred             ccCCchHHHHHHHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhHH
Q 047842          242 SIDSSTSFLRDTAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYLH  321 (465)
Q Consensus       242 ~~dl~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~  321 (465)
                       ..++++++.+++..+++|| |||+++++|++++|++||++|+|+++|++                           |++
T Consensus       225 -~~ls~~el~~~~~~l~~AG-eTt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------------------~l~  275 (406)
T 1s1f_A          225 -DEITLSEAVGLAVLLQIGG-EAVTNNSGQMFHLLLSRPELAERLRSEPE---------------------------IRP  275 (406)
T ss_dssp             -TSSCHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHSHHHHHHHHHCGG---------------------------GHH
T ss_pred             -cCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHCHHHHHHHHhCHH---------------------------HHH
Confidence             3589999999999999999 99999999999999999999999999976                           789


Q ss_pred             HHHhhhCCCCCCCc--CcceeccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCcc
Q 047842          322 AALCETLRLYPPVP--YNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYK  399 (465)
Q Consensus       322 a~i~E~lRl~p~~~--~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~  399 (465)
                      |||+|+||++|+++  ...|.+. +|+.++||.|||||.|+++.+++||||++| +||++|+||||.           ..
T Consensus       276 a~i~E~lRl~p~~~~~~~~R~~~-~d~~i~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~  342 (406)
T 1s1f_A          276 RAIDELLRWIPHRNAVGLSRIAL-EDVEIKGVRIRAGDAVYVSYLAANRDPEVF-PDPDRIDFERSP-----------NP  342 (406)
T ss_dssp             HHHHHHHHHSCCBSSCCCCEEES-SCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTC-------------CC
T ss_pred             HHHHHHHhhCCCccccCcceEeC-CCEEECCEEECCCCEEEeCcHHhcCCcccC-CCcceeCCCCCC-----------CC
Confidence            99999999999999  5555554 566679999999999999999999999999 999999999995           24


Q ss_pred             ccccCCCCCCCcChHHHHHHHHHHHHHHHhcc-EEEeecC-CCccCcceEEeecCCCeeEEEE
Q 047842          400 FTAFHAGPRNCLGKDKALIQMKMVASAVIGNY-HVKVAKG-HPVLPRKSIILNMKYGLKVQLS  460 (465)
Q Consensus       400 ~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  460 (465)
                      ++|||+|+|.|+|++||++|++++++.|+++| ++++.++ .++.+..+.+.+...+++|++.
T Consensus       343 ~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~  405 (406)
T 1s1f_A          343 HVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAPEDVPFKKGALIRGPEALPVTWH  405 (406)
T ss_dssp             CCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGGGSCBCSSCSBCCBSCCEEECC
T ss_pred             CCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCcEeCCCCccceeccCcccCCcceeEEeeC
Confidence            89999999999999999999999999999999 7999865 3444555556667777888763


No 36 
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=100.00  E-value=6.7e-57  Score=430.07  Aligned_cols=362  Identities=17%  Similarity=0.126  Sum_probs=273.4

Q ss_pred             chhHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCchhh-h------hhcccCCcccccCCh
Q 047842           44 YFHEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPDFR-M------IMEPLGDGVLNADGD  116 (465)
Q Consensus        44 ~~~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~~-~------~~~~~~~~l~~~~g~  116 (465)
                      +++.++. ++ ++||++|++   ++++.++|+|++|+.+++++.++ . |++++... .      .....+.+++..+|+
T Consensus        21 ~p~~~~~-~l-~~yGpv~~~---~~~~~~~vvv~~~~~v~~vl~~~-~-f~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~   93 (411)
T 3a4g_A           21 NPHPAYA-AL-RAEDPVRKL---ALPDGPVWLLTRYADVREAFVDP-R-LSKDWRHTLPEDQRADMPATPTPMMILMDPP   93 (411)
T ss_dssp             CCHHHHH-HH-HHHCSEEEE---EETTEEEEEECSHHHHHHHHTCT-T-EESCGGGGSCGGGCTTCCSCSSCCGGGCCTT
T ss_pred             CchHHHH-HH-HhcCCeeec---cCCCCCEEEEecHHHHHHHHhCC-C-cccccccccccccccccCcccccccccCCch
Confidence            4778888 88 899999999   77888999999999999999875 3 76655322 1      112246778889999


Q ss_pred             hHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHH-HHHHHHHHHHHHHhCCCCCCCCCCCc
Q 047842          117 LWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDV-LKRFAFDNICMLVLGIDPNYLSVEFP  195 (465)
Q Consensus       117 ~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~-~~~~~~~i~~~~~fG~~~~~~~~~~~  195 (465)
                      .|+++|+++++.|+...++.+ .+.+.+.+ +.+++.+..    ++++|+... ...+++++++.+ ||.+.+.      
T Consensus        94 ~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~----~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~------  160 (411)
T 3a4g_A           94 DHTRLRKLVGRSFTVRRMNEL-EPRITEIA-DGLLAGLPT----DGPVDLMREYAFQIPVQVICEL-LGVPAED------  160 (411)
T ss_dssp             HHHHHHHHHHTTCCHHHHHHH-HHHHHHHH-HHHHHHSCS----SSCEEHHHHTTTTHHHHHHHHH-HTCCGGG------
T ss_pred             HHHHHHHHhhhhhCHHHHHHH-HHHHHHHH-HHHHHHHHh----cCCccHHHHHHHHhHHHHHHHH-hCCCHHH------
Confidence            999999999999999999888 78888887 666666543    257999755 568999999975 9987642      


Q ss_pred             cchHHHHHHHHHHHHHHhhhchhHHHHHHHHhhhchHHHH--------HHhhh----hccCCchHHHHHHHHHHhhcchh
Q 047842          196 QTVYANAFNTMEQALLYRHIVPKICWKLQKWLQIGEEKKL--------SRAWK----LSIDSSTSFLRDTAFSFLGAGND  263 (465)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~--------~~~~~----~~~dl~~~~i~~~~~~~~~ag~~  263 (465)
                      ...+......+..... ..........+..++....+++.        .....    .-..++++++..++..+++||+|
T Consensus       161 ~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~~~ls~~ei~~~~~~l~~AG~d  239 (411)
T 3a4g_A          161 RDDFSAWSSVLVDDSP-ADDKNAAMGKLHGYLSDLLERKRTEPDDALLSSLLAVSDEDGDRLSQEELVAMAMLLLIAGHE  239 (411)
T ss_dssp             HHHHHHHHHHHTTSSC-TTTHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCCCTTCCCCCHHHHHHHHHHHHHHHSH
T ss_pred             HHHHHHHHHHHhccCC-HHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhhccCCCCCCHHHHHHHHHHHHHhchh
Confidence            1223333222211100 00000011111122221111111        11111    11147899999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhHHHHHhhhCCCCCCCcCcceeccC
Q 047842          264 TISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYLHAALCETLRLYPPVPYNHKIAGQ  343 (465)
Q Consensus       264 tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r~~~~  343 (465)
                      ||+++++|++++|++||++|+|+++|++                           |++|||+|+||++|+++...+|.+.
T Consensus       240 Tt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------------------~l~a~i~E~lRl~p~~~~~~~R~~~  292 (411)
T 3a4g_A          240 TTVNLIGNGVLALLTHPDQRKLLAEDPS---------------------------LISSAVEEFLRFDSPVSQAPIRFTA  292 (411)
T ss_dssp             HHHHHHHHHHHHHHTCHHHHHHHHHCGG---------------------------GHHHHHHHHHHHTCSBCBCCCEEES
T ss_pred             hHHHHHHHHHHHHHhCHHHHHHHhcCHH---------------------------HHHHHHHHHHHhcccccCCceeEeC
Confidence            9999999999999999999999999875                           7999999999999999944444444


Q ss_pred             ccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccccccCCCCCCCcChHHHHHHHHHH
Q 047842          344 ADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKFTAFHAGPRNCLGKDKALIQMKMV  423 (465)
Q Consensus       344 ~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~  423 (465)
                      +|+.++||.|||||.|+++.+++||||++| +||++|+||||.           ..++|||+|+|.|+|++||++|++++
T Consensus       293 ~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~l~FG~G~r~C~G~~lA~~e~~~~  360 (411)
T 3a4g_A          293 EDVTYSGVTIPAGEMVMLGLAAANRDADWM-PEPDRLDITRDA-----------SGGVFFGHGIHFCLGAQLARLEGRVA  360 (411)
T ss_dssp             SCEEETTEEECTTCEEEEBHHHHTTCTTTS-SSTTSCCTTSCC-----------TTCCTTCCSTTCCTTHHHHHHHHHHH
T ss_pred             CCEEECCEEECCCCEEEeChhhhCCChhhc-CCccccCCCCCC-----------CCCCCCCCCCccCCCHHHHHHHHHHH
Confidence            566679999999999999999999999999 999999999983           24899999999999999999999999


Q ss_pred             HHHHHhcc-EEEeecC-CCccCcceEEeecCCCeeEEEEecCCC
Q 047842          424 ASAVIGNY-HVKVAKG-HPVLPRKSIILNMKYGLKVQLSKRSLL  465 (465)
Q Consensus       424 l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~~~  465 (465)
                      ++.|+++| ++++.++ .+..+..+.+.++..+++|++++|+.|
T Consensus       361 la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~~r~~~  404 (411)
T 3a4g_A          361 IGRLFADRPELALAVGLDELVYRESTLVRGLSRMPVTMGPRSAL  404 (411)
T ss_dssp             HHHHHHHCTTCEESSCGGGCCBCCCTTBCCBSCCEEECCCCCC-
T ss_pred             HHHHHHhCCCcEECCCccccccccCccccCcceeEEEecCcchh
Confidence            99999999 6998753 234444455667778899999999764


No 37 
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=100.00  E-value=1.9e-57  Score=433.30  Aligned_cols=358  Identities=15%  Similarity=0.143  Sum_probs=272.6

Q ss_pred             chhHHHhHHHHhhcCceEEEecccc-cccceEEecChhhHHHhHhcCCCCCCCCch--h-hh---hhc-ccCCcccccCC
Q 047842           44 YFHEFLAHDVLKKNRGTFEFTGPWF-AQMDLIITSDPMNVHYISSKNFSNYPKGPD--F-RM---IME-PLGDGVLNADG  115 (465)
Q Consensus        44 ~~~~~~~~~~~~kyg~v~~~~~~~~-~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~--~-~~---~~~-~~~~~l~~~~g  115 (465)
                      +++.++. ++ ++||+||++   ++ |+.++|+++||+.+++++.++  .|++++.  + ..   ... ..+.+++..+|
T Consensus        20 ~p~~~~~-~l-~~yGpv~~~---~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~~~g   92 (403)
T 3aba_A           20 LPPDGIA-DI-RAAAPVTRA---TFTSGHEAWLVTGYEEVRALLRDS--SFSVQVPHALHTQDGVVTQKPGRGSLLWQDE   92 (403)
T ss_dssp             SCCTTHH-HH-HHHCSEEEE---ECTTSCEEEEECCHHHHHHHHHCT--TEESCCSCCTTSSSCCCCCCCCTTCCTTCCT
T ss_pred             ChhHHHH-HH-HhcCCeeee---ccCCCceEEEEcCHHHHHHHHcCC--CcccccccccccccccccccccccccccCCc
Confidence            4677888 88 899999999   86 889999999999999999874  3555421  1 11   112 24567888999


Q ss_pred             hhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHH-HHHHHHHHHHHHhCCCCCCCCCCC
Q 047842          116 DLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVL-KRFAFDNICMLVLGIDPNYLSVEF  194 (465)
Q Consensus       116 ~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~i~~~~~fG~~~~~~~~~~  194 (465)
                      +.|+++|+++++.|+...++.+ .+.+.+.+ +.+++.+.+   .++++|+...+ ..+++++++. +||.+.+.     
T Consensus        93 ~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~ll~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-----  161 (403)
T 3aba_A           93 PEHTSDRKLLAKEFTVRRMQAL-RPNIQRIV-DEHLDAIEA---RGGPVDLVKTFANAVPSMVISD-LFGVPVER-----  161 (403)
T ss_dssp             THHHHHHHHHHHHSCHHHHHTT-HHHHHHHH-HHHHHHHHH---HCSCEEHHHHTTTHHHHHHHHH-HHTCCGGG-----
T ss_pred             hhHHHHHHHHHhhcCHHHHHHH-HHHHHHHH-HHHHHHHHh---cCCCccHHHHHHHHHHHHHHHH-HcCCCHHH-----
Confidence            9999999999999999999888 78888887 666666653   35679998766 5799999998 69987542     


Q ss_pred             ccchHHHHHHHHHHHHHHhhhchhH----HHHHHHHhhhchHHHHH--------Hhhhh---ccCCchHHHHHHHHHHhh
Q 047842          195 PQTVYANAFNTMEQALLYRHIVPKI----CWKLQKWLQIGEEKKLS--------RAWKL---SIDSSTSFLRDTAFSFLG  259 (465)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~p~~----~~~~~~~~~~~~~~~~~--------~~~~~---~~dl~~~~i~~~~~~~~~  259 (465)
                       ...+......+...    ...|..    ...+..++....+++.+        .....   -..++++++.+++..+++
T Consensus       162 -~~~~~~~~~~~~~~----~~~p~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~~l~~~ei~~~~~~l~~  236 (403)
T 3aba_A          162 -RAEFQDIAEAMMRV----DQDAAATEAAGMRLGGLLYQLVQERRANPGDDLISALITTEDPDGVVDDMFLMNAAGTLLI  236 (403)
T ss_dssp             -HHHHHHHHHHHSBS----SSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHTSCCTTCCCSHHHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHHHhc----cCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhhccCCCCCCHHHHHHHHHHHHH
Confidence             12233322222110    000100    11111222211111111        00110   114789999999999999


Q ss_pred             cchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhHHHHHhhhCCCCCCCcCcce
Q 047842          260 AGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYLHAALCETLRLYPPVPYNHK  339 (465)
Q Consensus       260 ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r  339 (465)
                      ||+|||+++++|++++|++||++|+|+++|++                           |++|||+|+||++|+++....
T Consensus       237 AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------------------~l~a~i~E~lRl~p~~~~~~~  289 (403)
T 3aba_A          237 AAHDTTACMIGLGTALLLDSPDQLALLREDPS---------------------------LVGNAVEELLRYLTIGQFGGE  289 (403)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG---------------------------GHHHHHHHHHHHHCSCTTCEE
T ss_pred             HHHHHHHHHHHHHHHHHHHCHHHHHHHHhCHH---------------------------HHHHHHHHHHhcCCCcccccc
Confidence            99999999999999999999999999999875                           799999999999999994444


Q ss_pred             eccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccccccCCCCCCCcChHHHHHH
Q 047842          340 IAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKFTAFHAGPRNCLGKDKALIQ  419 (465)
Q Consensus       340 ~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e  419 (465)
                      |.+.+|+.++||.|||||.|+++.+++||||++| +||++|+||||.           ..++|||+|+|.|+|++||++|
T Consensus       290 R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~~-----------~~~l~FG~G~r~C~G~~lA~~e  357 (403)
T 3aba_A          290 RVATRDVELGGVRIAKGEQVVAHVLAADFDPAFV-EEPERFDITRRP-----------APHLAFGFGAHQCIGQQLARIE  357 (403)
T ss_dssp             EEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTSCC-----------CCCSTTCCGGGSCTTHHHHHHH
T ss_pred             eEeCCCeEECCEEECCCCEEEechhhhCCChhhC-CCccccCCCCCC-----------CCccCCCCCCccCcCHHHHHHH
Confidence            4445566779999999999999999999999999 999999999983           2489999999999999999999


Q ss_pred             HHHHHHHHHhcc-EEEeecC-CCccCcceEEeecCCCeeEEEEecC
Q 047842          420 MKMVASAVIGNY-HVKVAKG-HPVLPRKSIILNMKYGLKVQLSKRS  463 (465)
Q Consensus       420 ~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~  463 (465)
                      ++++++.|+++| ++++.++ .++.+..+.+.++..+++|++++|.
T Consensus       358 ~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~~r~  403 (403)
T 3aba_A          358 LQIVFETLFRRLPGLRLAKPVEELRFRHDMVFYGVHELPVTWHHHH  403 (403)
T ss_dssp             HHHHHHHHHHHSTTCEESSCGGGSCBCTTBSSCCBSCCEEECCCCC
T ss_pred             HHHHHHHHHHhCCCceecCCccccccccCcccCCcceeEEEecCCC
Confidence            999999999999 5998754 3444555666777788999999884


No 38 
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00  E-value=7.9e-58  Score=436.75  Aligned_cols=361  Identities=17%  Similarity=0.180  Sum_probs=272.9

Q ss_pred             chhHHHhHHHHhhcCceEEEecccc-cccceEEecChhhHHHhHhcCCCCCCCCc-hhhhh-----hc-------cc-CC
Q 047842           44 YFHEFLAHDVLKKNRGTFEFTGPWF-AQMDLIITSDPMNVHYISSKNFSNYPKGP-DFRMI-----ME-------PL-GD  108 (465)
Q Consensus        44 ~~~~~~~~~~~~kyg~v~~~~~~~~-~~~~~vvv~~p~~v~~i~~~~~~~~~~~~-~~~~~-----~~-------~~-~~  108 (465)
                      +++.++. ++ ++|||||++   ++ |+.++|+++||+.+++++.++  .+++.+ .+...     ..       .. +.
T Consensus        18 ~p~~~~~-~l-~~yGpv~~~---~~~g~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (411)
T 1gwi_A           18 DLDGESA-RL-RAAGPLAAV---ELPGGVPVWAVTHHAEAKALLTDP--RLVKDINVWGAWRRGEIPADWPLIGLANPGR   90 (411)
T ss_dssp             CHHHHHH-HH-HHTCSEEEE---EETTTEEEEEECSHHHHHHHHTCT--TEECCGGGCHHHHTTCSCTTCTTHHHHSCCS
T ss_pred             ChHHHHH-HH-HHhCCeeee---ecCCCccEEEEeCHHHHHHHHcCC--ccccCcccccccccccCCcccchhhhhcccc
Confidence            4777888 88 999999999   76 788999999999999999875  233333 11111     00       12 46


Q ss_pred             cccccCChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHHH-HHHHHHHHHHHhCCCC
Q 047842          109 GVLNADGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVLK-RFAFDNICMLVLGIDP  187 (465)
Q Consensus       109 ~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~-~~~~~i~~~~~fG~~~  187 (465)
                      ++++.+|+.|+++|+++++.|+...++.+ .+.+++.+ +.+++.+..   .++++|+...+. .+++++++. +||.+.
T Consensus        91 ~l~~~~g~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~  164 (411)
T 1gwi_A           91 SMLTVDGAEHRRLRTLVAQALTVRRVEHM-RGRITELT-DRLLDELPA---DGGVVDLKAAFAYPLPMYVVAD-LMGIEE  164 (411)
T ss_dssp             SGGGCCHHHHHHHHHHHTTTSCHHHHHTT-HHHHHHHH-HHHHHTSCC---SCCCEEHHHHTTTHHHHHHHHH-HHTCCG
T ss_pred             ccccCCcHHHHHHHHHHHHhcCHHHHHHH-HHHHHHHH-HHHHHHHHH---cCCCcchHHHHhhHHHHHHHHH-HhCCCH
Confidence            78889999999999999999999999887 78888887 666666652   356899998876 599999996 699865


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhhhchh----HHHHHHHHhhhchHHHHH--------Hhhhh---ccCCchHHHHH
Q 047842          188 NYLSVEFPQTVYANAFNTMEQALLYRHIVPK----ICWKLQKWLQIGEEKKLS--------RAWKL---SIDSSTSFLRD  252 (465)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~----~~~~~~~~~~~~~~~~~~--------~~~~~---~~dl~~~~i~~  252 (465)
                      +.      ...+......+...    ...+.    ....+..++....+++.+        .....   -..++++++.+
T Consensus       165 ~~------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~~l~~~~i~~  234 (411)
T 1gwi_A          165 AR------LPRLKVLFEKFFST----QTPPEEVVATLTELASIMTDTVAAKRAAPGDDLTSALIQASENGDHLTDAEIVS  234 (411)
T ss_dssp             GG------HHHHHHHHHHHHCT----TSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCCBTTBCCCHHHHHH
T ss_pred             HH------HHHHHHHHHHHhcc----CCChHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhcccCCCCCHHHHHH
Confidence            42      22333333322210    00011    011112222211111111        01110   12479999999


Q ss_pred             HHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhHHHHHhhhCCCCC
Q 047842          253 TAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYLHAALCETLRLYP  332 (465)
Q Consensus       253 ~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p  332 (465)
                      +++.+++||+|||+++++|++++|++||++|+|+++|+.                           |++|||+|+||++|
T Consensus       235 ~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~---------------------------~l~a~i~E~lRl~p  287 (411)
T 1gwi_A          235 TLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLSGEA---------------------------EWSAVVEETLRFST  287 (411)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTSS---------------------------CHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHhChHHHHHHHcChH---------------------------HHHHHHHHHHHhCC
Confidence            999999999999999999999999999999999998754                           68999999999999


Q ss_pred             CCcCcceeccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccccccCCCCCCCcC
Q 047842          333 PVPYNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKFTAFHAGPRNCLG  412 (465)
Q Consensus       333 ~~~~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G  412 (465)
                      +++...+|.+.+|+.++||.|||||.|+++.+++||||++||+||++|+||||.+          ..++|||+|+|.|+|
T Consensus       288 ~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeRf~~----------~~~lpFG~G~r~C~G  357 (411)
T 1gwi_A          288 PTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTADRFDLTRTSG----------NRHISFGHGPHVCPG  357 (411)
T ss_dssp             SBCCEEEEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCGGGGSCCTTCCCS----------SCCCTTCCSTTCCTT
T ss_pred             cccCCceeeeCCCeEECCEEECCCCEEEecHHHhcCChhhcCCChhhcCCCCCCC----------CCcccCCCCcccCCC
Confidence            9997544445556677999999999999999999999999999999999999942          358999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcc-EEEeecC-CCccCcceEEeecCCCeeEEEEecCC
Q 047842          413 KDKALIQMKMVASAVIGNY-HVKVAKG-HPVLPRKSIILNMKYGLKVQLSKRSL  464 (465)
Q Consensus       413 ~~~A~~e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~~  464 (465)
                      ++||++|++++++.|+++| ++++..+ .++.+..+.+.++..+++|++++|.+
T Consensus       358 ~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~lpv~~~~r~~  411 (411)
T 1gwi_A          358 AALSRMEAGVALPALYARFPHLDLAVPAAELRNKPVVTQNDLFELPVRLAHHHH  411 (411)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCSCTTBCCBSCCEEESSCC--
T ss_pred             HHHHHHHHHHHHHHHHHhCccceeCCCcccccccccccccCcceeEEEecCCCC
Confidence            9999999999999999999 7998643 34444445566777889999999863


No 39 
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=100.00  E-value=7.9e-57  Score=430.24  Aligned_cols=374  Identities=14%  Similarity=0.138  Sum_probs=272.3

Q ss_pred             CCCCCCCcccchHHHhhcccchhHHHhHHHHhhc-CceEEEecccc-cccceEEecChhhHHHhHhcCCCCCCCCch---
Q 047842           24 SPMRNWPVLGMLPGLLANTWYFHEFLAHDVLKKN-RGTFEFTGPWF-AQMDLIITSDPMNVHYISSKNFSNYPKGPD---   98 (465)
Q Consensus        24 Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~ky-g~v~~~~~~~~-~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~---   98 (465)
                      |+|+++|.+.....+.   .+++.++. ++ ++| |+||++   ++ |+.++|+|+||+.+++++.++  .+.+.+.   
T Consensus         8 ~~~~~~P~~~~~~~~~---~~p~~~~~-~l-~~~yGpv~~~---~~~g~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~   77 (412)
T 2zbx_A            8 PQTTDAPAFPSNRSCP---YQLPDGYA-QL-RDTPGPLHRV---TLYDGRQAWVVTKHEAARKLLGDP--RLSSNRTDDN   77 (412)
T ss_dssp             CCCCSSCBSSCCCSST---TSCCHHHH-HH-HHSSSSEEEE---ECTTSCEEEEECSHHHHHHHHTCT--TEECCTTSTT
T ss_pred             CCCCCCCCCCCCchhc---cChHHHHH-HH-HhcCCCeEee---ccCCCCcEEEEecHHHHHHHHcCc--ccccCccccc
Confidence            7888888663222232   24778888 88 788 999999   76 788999999999999999874  2333322   


Q ss_pred             hhhhh----cc--cCCcccccCChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHHH-
Q 047842           99 FRMIM----EP--LGDGVLNADGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVLK-  171 (465)
Q Consensus        99 ~~~~~----~~--~~~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~-  171 (465)
                      +....    ..  .+.+++..+|+.|+++|+++++.|+...++.+ .+.+++.+ +.+++.+..   .++++|+...+. 
T Consensus        78 ~~~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~---~g~~~d~~~~~~~  152 (412)
T 2zbx_A           78 FPATSPRFEAVRESPQAFIGLDPPEHGTRRRMTISEFTVKRIKGM-RPEVEEVV-HGFLDEMLA---AGPTADLVSQFAL  152 (412)
T ss_dssp             SCCCSGGGC----CCCCGGGCCTTHHHHHHTTTGGGGSHHHHHHH-HHHHHHHH-HHHHHHHHH---HCSCEEHHHHTTT
T ss_pred             ccccccccccccccccccccCCcHHHHHHHHHhhhhcCHHHHHHH-HHHHHHHH-HHHHHHHHh---cCCCccHHHHHHH
Confidence            11110    01  24578889999999999999999999999888 78888887 666666653   356799998886 


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCCCccchHHHHHHHHHHHHHHhhhchhHHHHHHHHhhhchHHHHH--------Hhhh---
Q 047842          172 RFAFDNICMLVLGIDPNYLSVEFPQTVYANAFNTMEQALLYRHIVPKICWKLQKWLQIGEEKKLS--------RAWK---  240 (465)
Q Consensus       172 ~~~~~i~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~--------~~~~---  240 (465)
                      .+++++++. +||.+.+.      ...+......+......... ......+..++....+++.+        ....   
T Consensus       153 ~~~~~vi~~-~~G~~~~~------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~  224 (412)
T 2zbx_A          153 PVPSMVICR-LLGVPYAD------HEFFQDASKRLVQSTDAQSA-LTARNDLAGYLDGLITQFQTEPGAGLVGALVADQL  224 (412)
T ss_dssp             HHHHHHHHH-HHTCCGGG------HHHHHHHHHHHHHCSSHHHH-HHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHTTT
T ss_pred             HHHHHHHHH-HcCCCHHH------HHHHHHHHHHHhccCcHHHH-HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhcc
Confidence            489999997 69987542      22333333322210000000 00011111222211111111        0111   


Q ss_pred             hccCCchHHHHHHHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhH
Q 047842          241 LSIDSSTSFLRDTAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYL  320 (465)
Q Consensus       241 ~~~dl~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l  320 (465)
                      .-..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++                           |+
T Consensus       225 ~~~~ls~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~---------------------------~l  277 (412)
T 2zbx_A          225 ANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADRS---------------------------LV  277 (412)
T ss_dssp             TTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG---------------------------GH
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhChH---------------------------hH
Confidence            012478999999999999999999999999999999999999999999865                           78


Q ss_pred             HHHHhhhCCCCCCCcCcceeccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccc
Q 047842          321 HAALCETLRLYPPVPYNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKF  400 (465)
Q Consensus       321 ~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~  400 (465)
                      +|||+|+||++|+++....|.+.+|+.++||.|||||.|+++.+++||||++| +||++|+||||-           ..+
T Consensus       278 ~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~  345 (412)
T 2zbx_A          278 PGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVY-EDPDALDIHRSA-----------RHH  345 (412)
T ss_dssp             HHHHHHHHHHHCCCGGGCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTSCC-----------TTC
T ss_pred             HHHHHHHHHhCCccccccceeeCCCeEECCEEECCCCEEEeChhhhcCCcccc-CCccccCCCCCC-----------CCc
Confidence            99999999999999954444444566679999999999999999999999999 999999999971           358


Q ss_pred             cccCCCCCCCcChHHHHHHHHHHHHHHHhcc-EEEeecC-CCccCcceEEeecCCCeeEEE
Q 047842          401 TAFHAGPRNCLGKDKALIQMKMVASAVIGNY-HVKVAKG-HPVLPRKSIILNMKYGLKVQL  459 (465)
Q Consensus       401 ~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  459 (465)
                      +|||.|+|.|+|++||++|++++++.|+++| ++++.++ .++.+..+.+.+....++|+.
T Consensus       346 l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~g~~~lpv~~  406 (412)
T 2zbx_A          346 LAFGFGVHQCLGQNLARLELEVILNALMDRVPTLRLAVPVEQLVLRPGTTIQGVNELPVTW  406 (412)
T ss_dssp             CTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGSCBCCTTSCCCBSCCEEEC
T ss_pred             cCCCCCCCcCccHHHHHHHHHHHHHHHHHhcCcccccCCcccceeccccccCCcceeeeec
Confidence            9999999999999999999999999999999 7999753 344444344444444566654


No 40 
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=100.00  E-value=2.3e-56  Score=426.76  Aligned_cols=359  Identities=13%  Similarity=0.080  Sum_probs=269.0

Q ss_pred             chhHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCchh------hhhhcccCCcccccCChh
Q 047842           44 YFHEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPDF------RMIMEPLGDGVLNADGDL  117 (465)
Q Consensus        44 ~~~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~------~~~~~~~~~~l~~~~g~~  117 (465)
                      +++.++. ++ ++|||||++   ++++.++|++++|+.+++++.++ ..|.+.+..      .......+.+++..+|+.
T Consensus        14 ~p~~~~~-~~-r~yGpv~~~---~~~~~~~vvv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~   87 (404)
T 3ejb_B           14 NPYSFYD-TL-RAVHPIYKG---SFLKYPGWYVTGYEETAAILKDA-RFKVRTPLPESSTKYQDLSHVQNQMMLFQNQPD   87 (404)
T ss_dssp             CHHHHHH-HH-HHHCSEEEE---EETTEEEEEECCHHHHHHHHHCT-TEECCCSSCTTCCTTHHHHHHHHTSGGGCCTTH
T ss_pred             CchHHHH-HH-HhhCCEeec---cCCCCCEEEEecHHHHHHHHhCc-ccccCcccccccccccchhhhhhcchhhcCCch
Confidence            4777888 77 589999999   88899999999999999999976 555554421      112234467899999999


Q ss_pred             HHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHH-HHHHHHHHHHHHHhCCCCCCCCCCCcc
Q 047842          118 WKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDV-LKRFAFDNICMLVLGIDPNYLSVEFPQ  196 (465)
Q Consensus       118 w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~-~~~~~~~i~~~~~fG~~~~~~~~~~~~  196 (465)
                      |+++|+++++.|+...++.+ .+.+++.+ +.+++.+.+    ++.+|+... ...++.++++.+ ||.+.+.      .
T Consensus        88 h~~~Rr~~~~~fs~~~l~~~-~~~i~~~~-~~ll~~l~~----~~~~d~~~~~~~~~~~~vi~~~-~G~~~~~------~  154 (404)
T 3ejb_B           88 HRRLRTLASGAFTPRTTESY-QPYIIETV-HHLLDQVQG----KKKMEVISDFAFPLASFVIANI-IGVPEED------R  154 (404)
T ss_dssp             HHHHHHHHHGGGSHHHHHTT-HHHHHHHH-HHHHHTTTT----TSEEEHHHHTHHHHHHHHHHHH-HTCCGGG------H
T ss_pred             HHHHHHHHHhhcCHHHHHHH-HHHHHHHH-HHHHHHhhh----cCCcchHHHHHHHHHHHHHHHH-cCCCHHH------H
Confidence            99999999999999999887 78888887 666665542    456898655 456999999995 8986542      1


Q ss_pred             chHHHHHHHHHHHHHHhhhchhHH-------HHHHHHhhhchHHHHHH--------hh--hhccCCchHHHHHHHHHHhh
Q 047842          197 TVYANAFNTMEQALLYRHIVPKIC-------WKLQKWLQIGEEKKLSR--------AW--KLSIDSSTSFLRDTAFSFLG  259 (465)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~p~~~-------~~~~~~~~~~~~~~~~~--------~~--~~~~dl~~~~i~~~~~~~~~  259 (465)
                      ..+......+....... ..+...       ..+..++....+++...        ..  ..-..++++++..+++.+++
T Consensus       155 ~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~ls~~el~~~~~~l~~  233 (404)
T 3ejb_B          155 EQLKEWAASLIQTIDFT-RSRKALTEGNIMAVQAMAYFKELIQKRKRHPQQDMISMLLKGREKDKLTEEEAASTCILLAI  233 (404)
T ss_dssp             HHHHHHHHHHHGGGSTT-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHC----CCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcchHHHHHHhcccCCCCCHHHHHHHHHHHHH
Confidence            22333332221111000 000000       11111121111111110        00  00114799999999999999


Q ss_pred             cchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhHHHHHhhhCCCCCCCcCcce
Q 047842          260 AGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYLHAALCETLRLYPPVPYNHK  339 (465)
Q Consensus       260 ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r  339 (465)
                      ||+|||+++++|++++|++||++|+|+++|++                           |++|||+|+||++|+++...|
T Consensus       234 AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~---------------------------~l~a~i~E~lRl~p~~~~~~R  286 (404)
T 3ejb_B          234 AGHETTVNLISNSVLCLLQHPEQLLKLRENPD---------------------------LIGTAVEECLRYESPTQMTAR  286 (404)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG---------------------------GHHHHHHHHHHHSCSBCEEEE
T ss_pred             cchHHHHHHHHHHHHHHHHCHHHHHHHHhCHH---------------------------HHHHHHHHHHHhCCcccccce
Confidence            99999999999999999999999999999987                           789999999999999995555


Q ss_pred             eccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccccccCCCCCCCcChHHHHHH
Q 047842          340 IAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKFTAFHAGPRNCLGKDKALIQ  419 (465)
Q Consensus       340 ~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e  419 (465)
                      .+ .+|+.++||.|||||.|+++.+++||||++| +||++|+||||-           ..++|||.|+|.|+|++||++|
T Consensus       287 ~~-~~d~~~~g~~ip~Gt~v~~~~~~~~rdp~~~-~dp~~F~p~R~~-----------~~~~~Fg~G~r~C~G~~lA~~e  353 (404)
T 3ejb_B          287 VA-SEDIDICGVTIRQGEQVYLLLGAANRDPSIF-TNPDVFDITRSP-----------NPHLSFGHGHHVCLGSSLARLE  353 (404)
T ss_dssp             EE-SSCEEETTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTCSS-----------CCCCTTCCSTTCCTTHHHHHHH
T ss_pred             Ee-CCCeEECCEEECCCCEEEecHHHhCCChhhC-CCcceeCCCCCC-----------CCCCCCCCcCccCcCHHHHHHH
Confidence            44 5566679999999999999999999999999 999999999982           2489999999999999999999


Q ss_pred             HHHHHHHHHhcc-EEEeecCCCccCcceEEeecCCCeeEEEEecC
Q 047842          420 MKMVASAVIGNY-HVKVAKGHPVLPRKSIILNMKYGLKVQLSKRS  463 (465)
Q Consensus       420 ~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  463 (465)
                      ++++++.|+++| +++++++ +..+..+.+++...+++|++++|.
T Consensus       354 ~~~~l~~ll~~f~~~~l~~~-~~~~~~~~~~~~~~~lpv~~~~~~  397 (404)
T 3ejb_B          354 AQIAINTLLQRMPSLNLADF-EWRYRPLFGFRALEELPVTFEASW  397 (404)
T ss_dssp             HHHHHHHHHHHCTTCEEC---CCCBCSCSSBCCBSCCEEECC---
T ss_pred             HHHHHHHHHHhCcccccCCC-CceeccCcccCCcceeEEEEeccc
Confidence            999999999999 9999753 455555666777788999999984


No 41 
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=100.00  E-value=4.4e-57  Score=431.71  Aligned_cols=360  Identities=14%  Similarity=0.127  Sum_probs=269.1

Q ss_pred             chhHHHhHHHHhhcCceEEEecccc-cccceEEecChhhHHHhHhcCCCCCCCCch---hhh---hhc---ccCCccccc
Q 047842           44 YFHEFLAHDVLKKNRGTFEFTGPWF-AQMDLIITSDPMNVHYISSKNFSNYPKGPD---FRM---IME---PLGDGVLNA  113 (465)
Q Consensus        44 ~~~~~~~~~~~~kyg~v~~~~~~~~-~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~---~~~---~~~---~~~~~l~~~  113 (465)
                      +++..+. ++ ++||+||++   ++ |+.++|+|+||+.+++++.++  .+.+.+.   +..   ...   ..+.++++.
T Consensus        25 ~p~~~~~-~l-~~yGpv~~~---~~~g~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   97 (408)
T 3abb_A           25 QPPKAYE-ER-RGESPLTQV---TLFDGRPAWLITGHAEGRALLVDP--RLSSDWGHPDFPVVVRRTEDRGGLAFPLIGV   97 (408)
T ss_dssp             SCCHHHH-HH-CCSSSEEEE---ECTTSCEEEEECCHHHHHHHHTCT--TEECCTTSTTCCCCC---------CCTTTTC
T ss_pred             CchHHHH-HH-HhcCCeeee---ecCCCCcEEEEeCHHHHHHHHcCC--CcccccccccccccccCCccccccccccccC
Confidence            4777888 88 899999999   86 788999999999999999874  2333221   111   111   123578889


Q ss_pred             CChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHHH-HHHHHHHHHHHhCCCCCCCCC
Q 047842          114 DGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVLK-RFAFDNICMLVLGIDPNYLSV  192 (465)
Q Consensus       114 ~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~-~~~~~i~~~~~fG~~~~~~~~  192 (465)
                      +|+.|+++|+++++.|+...++.+ .+.+++.+ +.+++.+..   .++++|+...+. .+++++++. +||.+.+.   
T Consensus        98 ~g~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~---~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~---  168 (408)
T 3abb_A           98 DDPVHARQRRMLIPSFGVKRMNAI-RPRLQSLV-DRLLDDMLA---KGPGADLVSAFALPVPSVAICE-LLGVPYGD---  168 (408)
T ss_dssp             CTTHHHHHHHHHGGGGCHHHHHHH-HHHHHHHH-HHHHHHHHH---TCSCEEHHHHTTTHHHHHHHHH-HHTCCGGG---
T ss_pred             CchHHHHHHHHhhhhcCHHHHHHH-HHHHHHHH-HHHHHHHHh---cCCCeehHHHHHHHHHHHHHHH-HhCCCHHH---
Confidence            999999999999999999999888 78888887 666666652   356799998876 589999998 69987542   


Q ss_pred             CCccchHHHHHHHHHHHHHHhhhchhHHHHHHHHhhhchHHHHH--------H---hhhhccCCchHHHHHHHHHHhhcc
Q 047842          193 EFPQTVYANAFNTMEQALLYRHIVPKICWKLQKWLQIGEEKKLS--------R---AWKLSIDSSTSFLRDTAFSFLGAG  261 (465)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~--------~---~~~~~~dl~~~~i~~~~~~~~~ag  261 (465)
                         ...+......+....... ........+..++....+++.+        .   ....-..++++++.+++..+++||
T Consensus       169 ---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~~ls~~ei~~~~~~l~~AG  244 (408)
T 3abb_A          169 ---HDFFEECSRNFVGAATSA-EADAAFGELYTYLHGLVGRKQAEPEDGLLDELIARQLEEGDLDHDEVVMIALVLLVAG  244 (408)
T ss_dssp             ---HHHHHHHHHHHC-------CCSSHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHTSSSCCHHHHHHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHHhcccchH-HHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhcccCCCCCCHHHHHHHHHHHHHHH
Confidence               123333333222210000 0011111122222211111111        0   000112489999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhHHHHHhhhCCCCCCCcCcceec
Q 047842          262 NDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYLHAALCETLRLYPPVPYNHKIA  341 (465)
Q Consensus       262 ~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r~~  341 (465)
                      +|||+++++|++++|++||++|+|+++|++                           |++|||+|+||++|+++...| .
T Consensus       245 ~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~---------------------------~l~a~i~E~lRl~p~~~~~~R-~  296 (408)
T 3abb_A          245 HETTVNAIALGALTLIQHPEQIDVLLRDPG---------------------------AVSGVVEELLRFTSVSDHIVR-M  296 (408)
T ss_dssp             HHHHHHHHHHHHHHHHTCGGGGGGGGSCHH---------------------------HHHHHHHHHHHHHCSSCEEEE-E
T ss_pred             HHHHHHHHHHHHHHHHhCHHHHHHHHhCHH---------------------------hHHHHHHHHHHhcCcccccce-E
Confidence            999999999999999999999999999876                           789999999999999995445 4


Q ss_pred             cCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccccccCCCCCCCcChHHHHHHHH
Q 047842          342 GQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKFTAFHAGPRNCLGKDKALIQMK  421 (465)
Q Consensus       342 ~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~  421 (465)
                      +.+|+.++||.|||||.|+++.+++||||++| +||++|+||||           ...++|||+|+|.|+|++||++|++
T Consensus       297 ~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~-----------~~~~~~FG~G~r~C~G~~lA~~e~~  364 (408)
T 3abb_A          297 AKEDIEVGGATIKAGDAVLVSITLMNRDAKAY-ENPDIFDARRN-----------ARHHVGFGHGIHQCLGQNLARAELE  364 (408)
T ss_dssp             ESSCEEETTEEECTTCEEEEEHHHHHTCTTTS-SSTTSCCTTSC-----------CTTCCTTCCGGGCCTTHHHHHHHHH
T ss_pred             eCCCeEECCEEECCCCEEEeChHHhcCCcccC-CCcccCCCCCC-----------CCCCCCCCCCCcCCcCHHHHHHHHH
Confidence            45566679999999999999999999999999 99999999996           1358999999999999999999999


Q ss_pred             HHHHHHHhcc-EEEeecC-CCccCcceEEeecCCCeeEEEEecC
Q 047842          422 MVASAVIGNY-HVKVAKG-HPVLPRKSIILNMKYGLKVQLSKRS  463 (465)
Q Consensus       422 ~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~  463 (465)
                      ++++.|+++| ++++.++ .++.+..+.+.++..+++|++++|.
T Consensus       365 ~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~lpv~~~~~~  408 (408)
T 3abb_A          365 IALGGLFARIPGLRLAVPLDEVPIKAGHDAQGPIELPVVWHHHH  408 (408)
T ss_dssp             HHHHHHHHHCTTCEESSCGGGSCBCCTTSCCSBSCCEEECSCCC
T ss_pred             HHHHHHHHhCccceecCCccccccccCcccCCcceeEEEeCCCC
Confidence            9999999999 8998643 3444444555667778999998873


No 42 
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=100.00  E-value=1.2e-56  Score=428.47  Aligned_cols=372  Identities=15%  Similarity=0.059  Sum_probs=279.3

Q ss_pred             CCCCCCCcc--cchHHHhhc--ccchhHHHhHHHHhhcC--ceEEEeccc-ccccceEEecChhhHHHhHhcCCCCCCCC
Q 047842           24 SPMRNWPVL--GMLPGLLAN--TWYFHEFLAHDVLKKNR--GTFEFTGPW-FAQMDLIITSDPMNVHYISSKNFSNYPKG   96 (465)
Q Consensus        24 Pgp~~~p~~--G~~~~~~~~--~~~~~~~~~~~~~~kyg--~v~~~~~~~-~~~~~~vvv~~p~~v~~i~~~~~~~~~~~   96 (465)
                      |||+++|..  +.+-.+...  ..+++.++. +++ +||  +||++   + +|  +.|+++|++.+++++++. ..|+++
T Consensus        14 ~~p~~~p~~~~~~~~~~~~~~~~~~p~~~~~-~l~-~~G~~pv~~~---~~~g--~~vvv~~~~~v~~vl~~~-~~f~~~   85 (415)
T 2zwu_A           14 PLPPHVPEHLVFDFDMYNPSNLSAGVQEAWA-VLQ-ESNVPDLVWT---RCNG--GHWIATRGQLIREAYEDY-RHFSSE   85 (415)
T ss_dssp             CCCTTSCGGGBCCCCTTSCTTGGGCHHHHHH-GGG-STTSCSEEEE---CGGG--CEEEECSHHHHHHHHHCT-TTEETT
T ss_pred             CCCCCCCcccccccCcCChhhcccChHHHHH-HHH-hcCCCCeEEe---cCCC--CeEEEcCHHHHHHHHcCc-cccCCC
Confidence            789998864  432211111  235788888 885 899  99998   6 44  799999999999999864 557666


Q ss_pred             c-hhhhhhcccCCc-ccccCChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHH-HHH
Q 047842           97 P-DFRMIMEPLGDG-VLNADGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVL-KRF  173 (465)
Q Consensus        97 ~-~~~~~~~~~~~~-l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~  173 (465)
                      + .+.......+.+ ++..+|+.|+++|+++.+.|+...++.+ .+.+.+.+ +.+++.+..   . +.+|+...+ ..+
T Consensus        86 ~~~~~~~~~~~~~~~l~~~~g~~~~~~R~~~~~~f~~~~l~~~-~~~i~~~~-~~l~~~l~~---~-~~~d~~~~~~~~~  159 (415)
T 2zwu_A           86 CPFIPREAGEAYDFIPTSMDPPEQRQFRALANQVVGMPVVDKL-ENRIQELA-CSLIESLRP---Q-GQCNFTEDYAEPF  159 (415)
T ss_dssp             SCSSSHHHHHHCCCTTTTCCTTTTHHHHHHHHHHHSHHHHHHH-HHHHHHHH-HHHHHHHGG---G-TEEEHHHHTTTHH
T ss_pred             cccCCCCccccccccCccCCCcHHHHHHHHHHhhhCHHHHHHH-HHHHHHHH-HHHHHHHHh---c-CCccHHHHHHHHH
Confidence            5 222211222567 8889999999999999999999999888 78888887 666666553   2 369999765 789


Q ss_pred             HHHHHHHHHhCCCCCCCCCCCccchHHHHHHHHHHHHHHhhhch----hHHHHHHHHhhhchHHHHH--------Hhhhh
Q 047842          174 AFDNICMLVLGIDPNYLSVEFPQTVYANAFNTMEQALLYRHIVP----KICWKLQKWLQIGEEKKLS--------RAWKL  241 (465)
Q Consensus       174 ~~~i~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----~~~~~~~~~~~~~~~~~~~--------~~~~~  241 (465)
                      ++++++++ ||.+.+.      ...+.+....+...     ..|    .....+..++....+++.+        .....
T Consensus       160 ~~~vi~~~-~G~~~~~------~~~~~~~~~~~~~~-----~~P~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~  227 (415)
T 2zwu_A          160 PIRIFMLL-AGLPEED------IPHLKYLTDQMTRP-----DGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAISIVANG  227 (415)
T ss_dssp             HHHHHHHH-HTCCGGG------HHHHHHHHHHHHSC-----CSSSCHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHTC
T ss_pred             HHHHHHHH-cCCCHHH------HHHHHHHHHHHHhc-----cCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHh
Confidence            99999999 9997642      12333333322210     011    1111122222222221111        01100


Q ss_pred             ---ccCCchHHHHHHHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccch
Q 047842          242 ---SIDSSTSFLRDTAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLV  318 (465)
Q Consensus       242 ---~~dl~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~  318 (465)
                         -..++++++..++..+++||+|||+.+++|++++|++||++|+|+++|++                           
T Consensus       228 ~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~---------------------------  280 (415)
T 2zwu_A          228 QVNGRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPE---------------------------  280 (415)
T ss_dssp             EETTEECCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHHCGG---------------------------
T ss_pred             hhcCCCCCHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHhCHHHHHHHHhCHH---------------------------
Confidence               01378999999999999999999999999999999999999999999975                           


Q ss_pred             hHHHHHhhhCCCCCCCcCcceeccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCc
Q 047842          319 YLHAALCETLRLYPPVPYNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTY  398 (465)
Q Consensus       319 ~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~  398 (465)
                      |++|||+|+||++|+++.. |.+.+ |+.++||.|||||.|+++.+++||||++| +||++|+||||-           .
T Consensus       281 ~l~a~i~E~lRl~p~~~~~-R~~~~-d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~  346 (415)
T 2zwu_A          281 RIPAACEELLRRFSLVADG-RILTS-DYEFHGVQLKKGDQILLPQMLSGLDEREN-ACPMHVDFSRQK-----------V  346 (415)
T ss_dssp             GHHHHHHHHHHHTCCBCCE-EEESS-CEEETTEEECTTCEEECCHHHHHHCTTTS-SSTTSCCTTCSS-----------C
T ss_pred             HHHHHHHHHHhhcCCcCCc-eeeCC-CEEECCEEECCCCEEEeCchhhCCCchhC-CCccccCCCCCC-----------C
Confidence            7999999999999999976 65555 56669999999999999999999999999 999999999961           2


Q ss_pred             cccccCCCCCCCcChHHHHHHHHHHHHHHHhccE-EEeecCCCccCcceEEeecCCCeeEEEEecC
Q 047842          399 KFTAFHAGPRNCLGKDKALIQMKMVASAVIGNYH-VKVAKGHPVLPRKSIILNMKYGLKVQLSKRS  463 (465)
Q Consensus       399 ~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  463 (465)
                      .++|||+|+|.|+|++||++|++++++.|+++|+ +++.++.++. ..+.+.++..+++|++++|+
T Consensus       347 ~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~-~~~~~~~~~~~lpv~~~~r~  411 (415)
T 2zwu_A          347 SHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQ-HKSGIVSGVQALPLVWDPAT  411 (415)
T ss_dssp             CCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHCCSCEECTTCCCC-EECSSBCEESCCEEECCGGG
T ss_pred             CCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCCCEECCCcccc-cCCccccCcceeEEEEecCC
Confidence            4899999999999999999999999999999998 9997633321 33445566678999999985


No 43 
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=100.00  E-value=1.5e-56  Score=426.75  Aligned_cols=355  Identities=13%  Similarity=0.095  Sum_probs=269.8

Q ss_pred             chhHHHhHHHHhhc--CceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCchhhhhh--cccCCcccccCChhHH
Q 047842           44 YFHEFLAHDVLKKN--RGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPDFRMIM--EPLGDGVLNADGDLWK  119 (465)
Q Consensus        44 ~~~~~~~~~~~~ky--g~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~g~~w~  119 (465)
                      +++.++. +++++|  ||||++   ++++ +.++|+||+.+++++++. +.|++++......  ...+.+++..+|+.|+
T Consensus        20 ~p~~~~~-~l~~~Y~~Gpv~~~---~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~   93 (398)
T 4fb2_A           20 TPHAFFE-ALRDEAETTPIGWS---EAYG-GHWVVAGYKEIQAVIQNT-KAFSNKGVTFPRYETGEFELMMAGQDDPVHK   93 (398)
T ss_dssp             SSHHHHH-HHHHHHTTCSEEEE---CGGG-CEEEECSHHHHHHHHTCC-SSEEGGGCSSSCC----CCCTTTTCCTTHHH
T ss_pred             ChhHHHH-HHHhcCCCCCeEEe---cCCC-CEEEEccHHHHHHHHhCh-hhccCCcccccCCCCcccccCcccCCchHHH
Confidence            5788999 999999  999999   7765 699999999999999654 5666655433211  2223457889999999


Q ss_pred             HHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHH-HHHHHHHHHHHHhCCCCCCCCCCCccch
Q 047842          120 IQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVL-KRFAFDNICMLVLGIDPNYLSVEFPQTV  198 (465)
Q Consensus       120 ~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~i~~~~~fG~~~~~~~~~~~~~~  198 (465)
                      ++|+++.+.|+...++.+ .+.+.+.+ +.+++.+.+    ++.+|+...+ ..++++++++ +||.+.+.      ...
T Consensus        94 ~~R~~~~~~f~~~~l~~~-~~~i~~~~-~~l~~~l~~----~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~------~~~  160 (398)
T 4fb2_A           94 KYRQLVAKPFSPEATDLF-TEQLRQST-NDLIDARIE----LGEGDAATWLANEIPARLTAI-LLGLPPED------GDT  160 (398)
T ss_dssp             HHHHHHHTTTCHHHHHTT-HHHHHHHH-HHHHHTTTT----TTEEEHCCCCCTTHHHHHHHH-HTTSCGGG------HHH
T ss_pred             HHHHHHHHhhCHHHHHHH-HHHHHHHH-HHHHHHHhh----cCCccHHHHHHHHHHHHHHHH-HcCCCHHH------HHH
Confidence            999999999999999887 78888887 666665543    2357875544 6899999999 69986532      223


Q ss_pred             HHHHHHHHHHHHHHhhhchh----HHHHHHHHhhhchHHHHHH--------hhhh---ccCCchHHHHHHHHHHhhcchh
Q 047842          199 YANAFNTMEQALLYRHIVPK----ICWKLQKWLQIGEEKKLSR--------AWKL---SIDSSTSFLRDTAFSFLGAGND  263 (465)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~p~----~~~~~~~~~~~~~~~~~~~--------~~~~---~~dl~~~~i~~~~~~~~~ag~~  263 (465)
                      +.+....+...     ..+.    ....+..++....+++.++        ....   -..++++++..+++.+++||+|
T Consensus       161 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~~l~~~~i~~~~~~l~~AG~~  235 (398)
T 4fb2_A          161 YRRWVWAITHV-----ENPEEGAEIFAELVAHARTLIAERRTNPGNDIMSRVIMSKIDGESLSEDDLIGFFTILLLGGID  235 (398)
T ss_dssp             HHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCCBTTBCCCHHHHHHHHHHCCCCCCH
T ss_pred             HHHHHHHHhcC-----CCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHcccCCCCCCHHHHHHHHHHHHHHhhH
Confidence            33333333220     1111    1111222222222211111        0000   0137999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhHHHHHhhhCCCCCCCcCcceeccC
Q 047842          264 TISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYLHAALCETLRLYPPVPYNHKIAGQ  343 (465)
Q Consensus       264 tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r~~~~  343 (465)
                      ||+++++|++++|++||++|+|+++|++                           |++|||+|+||++|+++ ..|.+.+
T Consensus       236 Tt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------------------~l~a~i~E~lRl~p~~~-~~R~~~~  287 (398)
T 4fb2_A          236 NTARFLSSVFWRLAWDIELRRRLIAHPE---------------------------LIPNAVDELLRFYGPAM-VGRLVTQ  287 (398)
T ss_dssp             HHHHHHHHHHHHHHHCHHHHHHHHHCGG---------------------------GHHHHHHHHHHHHCCBC-EEEEECS
T ss_pred             HHHHHHHHHHHHHHhCHHHHHHHHhCHH---------------------------HHHHHHHHHHHhCCCcC-CCeeeCC
Confidence            9999999999999999999999999987                           67999999999999999 6665555


Q ss_pred             ccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccccccCCCCCCCcChHHHHHHHHHH
Q 047842          344 ADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKFTAFHAGPRNCLGKDKALIQMKMV  423 (465)
Q Consensus       344 ~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~  423 (465)
                       |+.++||.|||||.|+++.+++||||++| +||++|+||||.           ..++|||+|+|.|||++||.+|++++
T Consensus       288 -d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~~-----------~~~~~FG~G~r~C~G~~lA~~e~~~~  354 (398)
T 4fb2_A          288 -EVTVGDITMKPGQTAMLWFPIASRDRSAF-DSPDNIVIERTP-----------NRHLSLGHGIHRCLGAHLIRVEARVA  354 (398)
T ss_dssp             -CEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCCS-----------CCCCTTCCSTTCCTTHHHHHHHHHHH
T ss_pred             -CEEECCEEECCCCEEEechHhhcCChhhC-CCcCeeCCCCCC-----------CCCCCCCCCCcCCCCHHHHHHHHHHH
Confidence             66669999999999999999999999999 999999999982           34899999999999999999999999


Q ss_pred             HHHHHhcc-EEEeecCCCccCcceEEeecCCCeeEEEEecCC
Q 047842          424 ASAVIGNY-HVKVAKGHPVLPRKSIILNMKYGLKVQLSKRSL  464 (465)
Q Consensus       424 l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  464 (465)
                      ++.|+++| +|+++++.+..+....+..+ ..++|++++|.+
T Consensus       355 l~~ll~~f~~~~~~~~~~~~~~~~~~~~~-~~lpv~~~~~~~  395 (398)
T 4fb2_A          355 ITEFLKRIPEFSLDPNKECEWLMGQVAGM-LHVPIIFPKGKR  395 (398)
T ss_dssp             HHHHHHHCCSCEECTTSCCEEECSSBCEE-EECEEECCCCCC
T ss_pred             HHHHHHhCCCcEECCCCCceecccccccc-ceeEEEEcCCCC
Confidence            99999999 99998776554443334344 459999998865


No 44 
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=100.00  E-value=4.5e-56  Score=425.12  Aligned_cols=358  Identities=16%  Similarity=0.154  Sum_probs=264.2

Q ss_pred             chhHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCchhhhhhc--ccCCcccccCChhHHHH
Q 047842           44 YFHEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPDFRMIME--PLGDGVLNADGDLWKIQ  121 (465)
Q Consensus        44 ~~~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~g~~w~~~  121 (465)
                      +++.++. ++++ |||| .+     ++.+.++|++|+.+++++.++ ..|++++... ...  ..+.+++..+|+.|+++
T Consensus        29 ~p~~~~~-~l~~-~gpv-~~-----~~~~~~vv~~~~~v~~vl~~~-~~f~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~   98 (411)
T 2jjn_A           29 ALLDWLG-TMRE-KQPV-WQ-----DRYGVWHVFRHADVQTVLRDT-ATFSSDPTRV-IEGASPTPGMIHEIDPPEHRAL   98 (411)
T ss_dssp             HHHHHHH-HHHH-HCSE-EE-----CTTSCEEECSHHHHHHHHHCT-TTEESCGGGG-STTCCCCTTCGGGCCTTHHHHH
T ss_pred             ChHHHHH-HHHH-hCCc-cc-----CCCCeEEECCHHHHHHHHcCc-ccccCccccc-CCcccccccccccCCchHHHHH
Confidence            3677788 8875 9998 33     456799999999999999875 4676665322 111  33567888999999999


Q ss_pred             HHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHH-HHHHHHHHHHHHHhCCCCCCCCCCCccchHH
Q 047842          122 RKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDV-LKRFAFDNICMLVLGIDPNYLSVEFPQTVYA  200 (465)
Q Consensus       122 R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~-~~~~~~~i~~~~~fG~~~~~~~~~~~~~~~~  200 (465)
                      |+++++.|+...++.+ .+.+++.+ +.+++.      .++++|+... ...+++++++++ ||.+.+..+   ....+ 
T Consensus        99 R~~~~~~fs~~~l~~~-~~~i~~~~-~~ll~~------~~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~~---~~~~~-  165 (411)
T 2jjn_A           99 RKVVSSAFTPRTISDL-EPRIRDVT-RSLLAD------AGESFDLVDVLAFPLPVTIVAEL-LGLPPMDHE---QFGDW-  165 (411)
T ss_dssp             HHHHHHHSCHHHHHTT-HHHHHHHH-HHHHHT------SCSEEEHHHHTTTHHHHHHHHHH-HTCCSCCCS---TTCCH-
T ss_pred             HHHhhhhcCHHHHHHH-HHHHHHHH-HHHHhc------CCCceeHHHHHHHHHHHHHHHHH-cCCCHHHHH---HHHHH-
Confidence            9999999999999887 78888776 544443      2347999855 468999999998 999865322   11112 


Q ss_pred             HHHHHHHHHHHHhhhchhHHH-------HHHHHhhhchHHHHHH--------hhhh---ccCCchHHHHHHHHHHhhcch
Q 047842          201 NAFNTMEQALLYRHIVPKICW-------KLQKWLQIGEEKKLSR--------AWKL---SIDSSTSFLRDTAFSFLGAGN  262 (465)
Q Consensus       201 ~~~~~~~~~~~~~~~~p~~~~-------~~~~~~~~~~~~~~~~--------~~~~---~~dl~~~~i~~~~~~~~~ag~  262 (465)
                        ...+..........|....       .+..++....+++.+.        ....   -..++++++.+++..+++||+
T Consensus       166 --~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~~l~~~el~~~~~~~~~AG~  243 (411)
T 2jjn_A          166 --SGALVDIQMDDPTDPALAERIADVLNPLTAYLKARCAERRADPGDDLISRLVLAEVDGRALDDEEAANFSTALLLAGH  243 (411)
T ss_dssp             --HHHHHHSCCSCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCCBTTBCCCHHHHHHHHHHHHHHHH
T ss_pred             --HHHHHhccCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhcccCCCCCCHHHHHHHHHHHHHhhh
Confidence              2222111000000011111       1111221111111110        0000   113789999999999999999


Q ss_pred             hhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhHHHHHhhhCCCCCCCcCcceecc
Q 047842          263 DTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYLHAALCETLRLYPPVPYNHKIAG  342 (465)
Q Consensus       263 ~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r~~~  342 (465)
                      |||+++++|++++|++||++|+|+++|++                           |++|||+|+||++|+++...|.+.
T Consensus       244 eTt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------------------~l~a~i~E~lRl~p~~~~~~R~~~  296 (411)
T 2jjn_A          244 ITTTVLLGNIVRTLDEHPAHWDAAAEDPG---------------------------RIPAIVEEVLRYRPPFPQMQRTTT  296 (411)
T ss_dssp             HHHHHHHHHHHHHHHHSTHHHHHHHHCGG---------------------------GHHHHHHHHHHHSCSSCEEEEEES
T ss_pred             HHHHHHHHHHHHHHHhCHHHHHHHHhCHH---------------------------hHHHHHHHHhhhCCCcCCcceEEC
Confidence            99999999999999999999999999976                           799999999999999997555554


Q ss_pred             CccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccccccCCCCCCCcChHHHHHHHHH
Q 047842          343 QADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKFTAFHAGPRNCLGKDKALIQMKM  422 (465)
Q Consensus       343 ~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~  422 (465)
                      + |+.++||.|||||.|+++.+++||||++| +||++|+||||.+         ...++|||+|+|.|+|++||++|+++
T Consensus       297 ~-d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~~---------~~~~~pFG~G~r~C~G~~lA~~e~~~  365 (411)
T 2jjn_A          297 K-ATEVAGVPIPADVMVNTWVLSANRDSDAH-DDPDRFDPSRKSG---------GAAQLSFGHGVHFCLGAPLARLENRV  365 (411)
T ss_dssp             S-CEEETTEEECSSCEEEEEHHHHHTCTTTS-SSTTSCCTTCCCS---------SCCCGGGCSSTTCCTTHHHHHHHHHH
T ss_pred             C-CeEECCEEECCCCEEEechhhhCCChhhc-CCccccCCCCCCC---------CCCccCCCCCCccCcCHHHHHHHHHH
Confidence            4 56669999999999999999999999999 9999999999842         13589999999999999999999999


Q ss_pred             HHHHHHhccE-EEeecCCCccCcceEEeecCCCeeEEEEecCC
Q 047842          423 VASAVIGNYH-VKVAKGHPVLPRKSIILNMKYGLKVQLSKRSL  464 (465)
Q Consensus       423 ~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  464 (465)
                      +++.|+++|+ +++.+..++....+.+.+...+++|++++|..
T Consensus       366 ~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~lpv~~~~~~r  408 (411)
T 2jjn_A          366 ALEEIIARFGRLTVDRDDERLRHFEQIVLGTRHLPVLAGSSPR  408 (411)
T ss_dssp             HHHHHHHHHSCCEECCSSCCCCBCCSSSSSBSCCEEECSCCTT
T ss_pred             HHHHHHHhCCcceECCCCceeccccccccCcceeEEEecCCCC
Confidence            9999999995 99974333321344455666789999988764


No 45 
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00  E-value=2.1e-56  Score=427.03  Aligned_cols=358  Identities=19%  Similarity=0.206  Sum_probs=270.5

Q ss_pred             chhHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCch--hh---hhhc-------ccCCccc
Q 047842           44 YFHEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPD--FR---MIME-------PLGDGVL  111 (465)
Q Consensus        44 ~~~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~--~~---~~~~-------~~~~~l~  111 (465)
                      +++.++. ++ ++||+||++   ++++.++|+|+||+.+++++.++  .+++.+.  +.   ....       ..+.+++
T Consensus        16 ~p~~~~~-~l-~~yGpv~~~---~~~~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   88 (408)
T 1odo_A           16 DHHTEHR-TL-REGGPATWV---DVLGVQAWSVSDPVLLKQLLTSS--DVSKDARAHWPAFGEVVGTWPLALWVAVENMF   88 (408)
T ss_dssp             THHHHHH-HH-HTTCSEEEE---EETTEEEEEECCHHHHHHHTTCT--TEESCHHHHCTTHHHHTTTCTTTHHHHCCSGG
T ss_pred             ChHHHHH-HH-HHhCCeEEe---ccCCCCEEEECCHHHHHHHHcCC--Cccccccccccccccccccccccccccccccc
Confidence            4777888 89 999999999   77788999999999999999874  2344332  11   1110       1346788


Q ss_pred             ccCChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHHH-HHHHHHHHHHHhCCCCCCC
Q 047842          112 NADGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVLK-RFAFDNICMLVLGIDPNYL  190 (465)
Q Consensus       112 ~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~-~~~~~i~~~~~fG~~~~~~  190 (465)
                      ..+|+.|+++|+++.+.|+...++.+ .+.+.+.+ +.+++.+.+. ..++++|+...+. .+++++++. +||.+.+. 
T Consensus        89 ~~~g~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~~-~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-  163 (408)
T 1odo_A           89 TAYGPNHRKLRRLVAPAFSARRVDAM-RPAVEAMV-TGLVDRLAEL-PAGEPVDLRQELAYPLPIAVIGH-LMGVPQDR-  163 (408)
T ss_dssp             GCCHHHHHHHHHTTGGGGSHHHHHHH-HHHHHHHH-HHHHHHHHHS-CTTSCEEHHHHTTTHHHHHHHHH-HHTCCHHH-
T ss_pred             ccCChHHHHHHHHhhhhcCHHHHHHH-HHHHHHHH-HHHHHHHHhh-cCCCCcchHHHHhhhhHHHHHHH-HhCCCHHH-
Confidence            89999999999999999999999888 78888887 6666666542 2356899998886 599999996 69986531 


Q ss_pred             CCCCccchHHHHHHHHHHHHHHhhhchh----HHHHHHHHhhhchHHHH--------HHhhh---h---ccCCchHHHHH
Q 047842          191 SVEFPQTVYANAFNTMEQALLYRHIVPK----ICWKLQKWLQIGEEKKL--------SRAWK---L---SIDSSTSFLRD  252 (465)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~----~~~~~~~~~~~~~~~~~--------~~~~~---~---~~dl~~~~i~~  252 (465)
                           ...+......+...    ...+.    ....+..++....+++.        .....   .   -..++++++.+
T Consensus       164 -----~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~~~~~l~~~ei~~  234 (408)
T 1odo_A          164 -----RDGFRALVDGVFDT----TLDQAEAQANTARLYEVLDQLIAAKRATPGDDMTSLLIAARDDEGDGDRLSPEELRD  234 (408)
T ss_dssp             -----HHHHHHHHHHHHCT----TCCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHCC-----CCCHHHHHH
T ss_pred             -----HHHHHHHHHHHhcc----cCCHHHHHHHHHHHHHHHHHHHHHHhhCCCCCHHHHHHHhcccccccCCCCHHHHHH
Confidence                 12233333222210    00010    01111122211111111        10111   0   12479999999


Q ss_pred             HHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhHHHHHhhhCCCCC
Q 047842          253 TAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYLHAALCETLRLYP  332 (465)
Q Consensus       253 ~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p  332 (465)
                      ++..+++||+|||+++++|++++|++||++|+|+++|+.                           |++|||+|+||++|
T Consensus       235 ~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~---------------------------~l~a~i~E~lRl~p  287 (408)
T 1odo_A          235 TLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVRKGEV---------------------------TWADVVEETLRHEP  287 (408)
T ss_dssp             HHHHHHHHHHTTHHHHHHHHHHHHHHCHHHHHHHHHTSS---------------------------CHHHHHHHHHHHSC
T ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHH---------------------------HHHHHHHHHHhhCC
Confidence            999999999999999999999999999999999999754                           68999999999999


Q ss_pred             CCcCcceeccCccccCC-CeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccccccCCCCCCCc
Q 047842          333 PVPYNHKIAGQADILPS-GHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKFTAFHAGPRNCL  411 (465)
Q Consensus       333 ~~~~~~r~~~~~~~~~~-g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~  411 (465)
                      +++....|.+.+|+.++ ||.|||||.|+++.+++||||++| +||++|+|||+           ...++|||+|+|.|+
T Consensus       288 ~~~~~~~R~~~~d~~l~~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~-----------~~~~~pFG~G~r~C~  355 (408)
T 1odo_A          288 AVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWH-EDADTFDATRT-----------VKEHLAFGHGVHFCL  355 (408)
T ss_dssp             SBSCEEEEEESSCEECTTSCEECTTCEEEECHHHHTTCTTTS-TTTTSCCTTCS-----------CCCCCTTCSSTTSCT
T ss_pred             CccCCcceEeCCCeEcCCCcEECCCCEEEeChhhhcCChhhc-CCccccCCCCC-----------CCCCCCCCCCCccCC
Confidence            99975444455566778 999999999999999999999999 99999999994           135899999999999


Q ss_pred             ChHHHHHHHHHHHHHHHhcc-EEEeec-CCCccCcceEEeecCCCeeEEEEe
Q 047842          412 GKDKALIQMKMVASAVIGNY-HVKVAK-GHPVLPRKSIILNMKYGLKVQLSK  461 (465)
Q Consensus       412 G~~~A~~e~~~~l~~ll~~f-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  461 (465)
                      |++||++|++++++.|+++| ++++.. ..++.+..+.++++..+++|++++
T Consensus       356 G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~  407 (408)
T 1odo_A          356 GAPLARMEVTLALESLFGRFPDLRLADPAEELPPVPSLISNGHQRLPVLLHA  407 (408)
T ss_dssp             THHHHHHHHHHHHHHHHHHCTTCEESCTTSCCCBCSCSSBCCBSCCEEECC-
T ss_pred             CHHHHHHHHHHHHHHHHHhCCcceecCCccccccccCccccCcccceEEecC
Confidence            99999999999999999999 799974 345556666777888889999875


No 46 
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=100.00  E-value=1.2e-56  Score=428.67  Aligned_cols=360  Identities=15%  Similarity=0.156  Sum_probs=269.5

Q ss_pred             cchhHHHhHHHHhhcCceE-----EEecccccccceEEecChhhHHHhHhcCCCCCCCCchhh-h----hh-c-ccCCcc
Q 047842           43 WYFHEFLAHDVLKKNRGTF-----EFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPDFR-M----IM-E-PLGDGV  110 (465)
Q Consensus        43 ~~~~~~~~~~~~~kyg~v~-----~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~~-~----~~-~-~~~~~l  110 (465)
                      .+++.++. ++ ++|||||     ++   ++  .++|+|+||+.+++++.++ ..|++++... .    .. . ..+.++
T Consensus        25 ~~p~~~~~-~l-~~~Gpv~~~~~~~~---~~--~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~l   96 (414)
T 2uuq_A           25 PNPWPMYR-AL-RDHDPVHHVVPPQR---PE--YDYYVLSRHADVWSAARDH-QTFSSAQGLTVNYGELEMIGLHDTPPM   96 (414)
T ss_dssp             TCCHHHHH-HH-HHHCSEEEECCTTC---GG--GCEEEECSHHHHHHHHHCT-TTEESTTCSSSCTTHHHHHTCSSSCCG
T ss_pred             cCchHHHH-HH-HhcCCEEccccccc---CC--CCEEEEcCHHHHHHHHcCc-hhccCCCCcccccCccccccccccccc
Confidence            35777888 88 4799998     77   54  6899999999999999976 5676654331 0    11 1 336778


Q ss_pred             cccCChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHH-HHHHHHHHHHHHHHHhCCCCCC
Q 047842          111 LNADGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQ-DVLKRFAFDNICMLVLGIDPNY  189 (465)
Q Consensus       111 ~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~-~~~~~~~~~i~~~~~fG~~~~~  189 (465)
                      +..+|+.|+++|+++++.|+...++.+ .+.+++.+ +.+++.+..   . +.+|+. +++..+++++++. +||.+.+.
T Consensus        97 ~~~~g~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~ll~~l~~---~-~~vdl~~~~~~~~~~~vi~~-~~G~~~~~  169 (414)
T 2uuq_A           97 VMQDPPVHTEFRKLVSRGFTPRQVETV-EPTVRKFV-VERLEKLRA---N-GGGDIVTELFKPLPSMVVAH-YLGVPEED  169 (414)
T ss_dssp             GGCCTTHHHHHHHHHHTTSSHHHHHHH-HHHHHHHH-HHHHHHHHH---T-TEEEHHHHTTTHHHHHHHHH-HTTCCGGG
T ss_pred             ccCCchhHHHHHHHhhhhcCHHHHHHH-HHHHHHHH-HHHHHHHHh---c-CCccHHHHHHHHhHHHHHHH-HhCCCHHH
Confidence            889999999999999999999999888 78888887 666666653   1 359997 5567999999999 69987652


Q ss_pred             CCCCCccchHHHHHHHHHHHHHH-hh--hchhHHHHHHHHhhhchHHH--------HHHhhhh-----ccCCchHHHHHH
Q 047842          190 LSVEFPQTVYANAFNTMEQALLY-RH--IVPKICWKLQKWLQIGEEKK--------LSRAWKL-----SIDSSTSFLRDT  253 (465)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~-~~--~~p~~~~~~~~~~~~~~~~~--------~~~~~~~-----~~dl~~~~i~~~  253 (465)
                            ...+......+...... ..  ........+..++....+++        +......     -..++++++.++
T Consensus       170 ------~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~~~~ls~~ei~~~  243 (414)
T 2uuq_A          170 ------WTQFDGWTQAIVAANAVDGATTGALDAVGSMMAYFTGLIERRRTEPADDAISHLVAAGVGADGDTAGTLSILAF  243 (414)
T ss_dssp             ------HHHHHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHHTTSCCSSHHHHHHHTTTTCTTCHHHHHHHHHH
T ss_pred             ------HHHHHHHHHHHHhhcccCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhcccccCCCCCCHHHHHHH
Confidence                  12333333333321100 00  00011111222222111111        1111110     012678899999


Q ss_pred             HHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhHHHHHhhhCCCCCC
Q 047842          254 AFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYLHAALCETLRLYPP  333 (465)
Q Consensus       254 ~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~  333 (465)
                      +..+++||+|||+++++|++++|++||++|+|+++|++                           |++|||+|+||++|+
T Consensus       244 ~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------------------~l~a~i~E~lRl~p~  296 (414)
T 2uuq_A          244 TFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDDPE---------------------------GIPDAVEELLRLTSP  296 (414)
T ss_dssp             HHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGG---------------------------GHHHHHHHHHHHHCS
T ss_pred             HHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH---------------------------HHHHHHHHHHHhCCC
Confidence            99999999999999999999999999999999999875                           899999999999999


Q ss_pred             CcCcceeccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccccccCCCCCCCcCh
Q 047842          334 VPYNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKFTAFHAGPRNCLGK  413 (465)
Q Consensus       334 ~~~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G~  413 (465)
                      ++...|.+. +|+.++||.|||||.|+++.+++||||++||+||++|+||||.           ..++|||+|+|.|+|+
T Consensus       297 ~~~~~R~~~-~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeR~~-----------~~~~~FG~G~r~C~G~  364 (414)
T 2uuq_A          297 VQGLARTTT-RDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVTRCP-----------RNILTFSHGAHHCLGA  364 (414)
T ss_dssp             BCCEEEEES-SCEEETTEEECTTCEEEECHHHHTTCHHHHCTTTTSCCTTCCC-----------CSCCTTCSSTTCCTTH
T ss_pred             cCCcceEEC-CCEEECCEEECCCCEEEeChhhhCCCHHHhCCCchhcCCCCCC-----------CCCcCCCCCCccCCCH
Confidence            995555554 5666799999999999999999999999999999999999984           2489999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcc-EEEeecCCCccCcceEEeecCCCeeEEEEecC
Q 047842          414 DKALIQMKMVASAVIGNY-HVKVAKGHPVLPRKSIILNMKYGLKVQLSKRS  463 (465)
Q Consensus       414 ~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  463 (465)
                      +||++|++++++.|+++| ++++.+ .+..+..+.++++..+++|++++|.
T Consensus       365 ~lA~~e~~~~la~ll~~f~~~~l~~-~~~~~~~~~~~~~~~~lpv~~~~r~  414 (414)
T 2uuq_A          365 AAARMQCRVALTELLARCPDFEVAE-SRIVWSGGSYVRRPLSVPFRVTSSR  414 (414)
T ss_dssp             HHHHHHHHHHHHHHHHHCCSEEECG-GGCEECCCSSBCCEEECEEEEC---
T ss_pred             HHHHHHHHHHHHHHHHhCcccEECC-CCccccccccccCcceeEEEecCCC
Confidence            999999999999999999 699974 3444455566677788999999874


No 47 
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=100.00  E-value=9e-56  Score=421.45  Aligned_cols=359  Identities=14%  Similarity=0.142  Sum_probs=270.9

Q ss_pred             cchhHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCchhhhhhcccCCcccccCChhHHHHH
Q 047842           43 WYFHEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPDFRMIMEPLGDGVLNADGDLWKIQR  122 (465)
Q Consensus        43 ~~~~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~w~~~R  122 (465)
                      .+++.++. ++++ |||||++   .   .++|+|++|+.+++++.++ ..|++++... .....+.+++..+|+.|+++|
T Consensus        18 ~~p~~~~~-~l~~-~Gpv~~~---~---~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~-~~~~~~~~l~~~~g~~h~~~R   87 (398)
T 2xkr_A           18 REARAAYR-WMRA-NQPVFRD---R---NGLAAASTYQAVIDAERQP-ELFSNAGGIR-PDQPALPMMIDMDDPAHLLRR   87 (398)
T ss_dssp             TTHHHHHH-HHHH-HCSEEEC---T---TCCEEECSHHHHHHHHTCT-TTEESTTCSS-TTSCCCSSGGGCCTTHHHHHH
T ss_pred             cChhHHHH-HHHh-cCCeeec---C---CCeEEEecHHHHHHHHhCc-ccccCccccC-CcccccccccccCchHHHHHH
Confidence            35788888 8876 9999876   3   2799999999999999875 4566654332 112346678889999999999


Q ss_pred             HHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHH-HHHHHHHHHHHHHHhCCCCCCCCCCCccchHHH
Q 047842          123 KIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQD-VLKRFAFDNICMLVLGIDPNYLSVEFPQTVYAN  201 (465)
Q Consensus       123 ~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~-~~~~~~~~i~~~~~fG~~~~~~~~~~~~~~~~~  201 (465)
                      +++++.|+...++.+ .+.+.+.+ +.+++.+..    ++.+|+.. ....+++++++++ ||.+.+.      ...+..
T Consensus        88 ~~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~----~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~------~~~~~~  154 (398)
T 2xkr_A           88 KLVNAGFTRKRVKDK-EASIAALC-DTLIDAVCE----RGECDFVRDLAAPLPMAVIGDM-LGVRPEQ------RDMFLR  154 (398)
T ss_dssp             HHHGGGSCHHHHHTT-HHHHHHHH-HHHHHTTTT----TSEEEHHHHTTTHHHHHHHHHH-HTCCGGG------HHHHHH
T ss_pred             HHhhhhhCHHHHHHH-HHHHHHHH-HHHHHhhhh----cCCccHHHHHHHHHHHHHHHHH-hCCCHHH------HHHHHH
Confidence            999999999999888 78888887 666666543    23699984 4568999999998 9997642      223444


Q ss_pred             HHHHHHHHHHHhhhchhHHHH-------HHHHhhhchHHHHHH--------hhhh---ccCCchHHHHHHHHHHhhcchh
Q 047842          202 AFNTMEQALLYRHIVPKICWK-------LQKWLQIGEEKKLSR--------AWKL---SIDSSTSFLRDTAFSFLGAGND  263 (465)
Q Consensus       202 ~~~~~~~~~~~~~~~p~~~~~-------~~~~~~~~~~~~~~~--------~~~~---~~dl~~~~i~~~~~~~~~ag~~  263 (465)
                      ....+.... .....|.....       +..++....+++.+.        ....   -..++++++..+++.+++||+|
T Consensus       155 ~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~~ls~~ei~~~~~~l~~AG~e  233 (398)
T 2xkr_A          155 WSDDLVTFL-SSHVSQEDFQITMDAFAAYNDFTRATIAARRADPTDDLVSVLVSSEVDGERLSDDELVMETLLILIGGDE  233 (398)
T ss_dssp             HHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCCBTTBCCCHHHHHHHHHHHHHHHSH
T ss_pred             HHHHHHhcc-CcccchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHhhH
Confidence            443333221 11111211111       111222111111110        0000   0137899999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhHHHHHhhhCCCCCCCcCcceeccC
Q 047842          264 TISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYLHAALCETLRLYPPVPYNHKIAGQ  343 (465)
Q Consensus       264 tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r~~~~  343 (465)
                      ||+++++|++++|++||++|+|+++|++                           |++|||+|+||++|+++...|.+ .
T Consensus       234 Tt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------------------~l~a~i~E~lRl~p~~~~~~R~~-~  285 (398)
T 2xkr_A          234 TTRHTLSGGTEQLLRNRDQWDLLQRDPS---------------------------LLPGAIEEMLRWTAPVKNMCRVL-T  285 (398)
T ss_dssp             HHHHHHHHHHHHHHHSHHHHHHHHHCGG---------------------------GHHHHHHHHHHHHCSBCEEEEEE-S
T ss_pred             HHHHHHHHHHHHHHHCHHHHHHHHhCHH---------------------------HHHHHHHHHHhhcccccCcceEE-C
Confidence            9999999999999999999999999986                           78999999999999999855555 4


Q ss_pred             ccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccccccCCCCCCCcChHHHHHHHHHH
Q 047842          344 ADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKFTAFHAGPRNCLGKDKALIQMKMV  423 (465)
Q Consensus       344 ~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~  423 (465)
                      +|+.++||.|||||.|+++.+++||||++| +||++|+||||..           .++|||+|+|.|+|++||++|++++
T Consensus       286 ~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~~-----------~~l~FG~G~r~C~G~~lA~~e~~~~  353 (398)
T 2xkr_A          286 ADTEFHGTALCAGEKMMLLFESANFDEAVF-CEPEKFDVQRNPN-----------SHLAFGFGTHFCLGNQLARLELSLM  353 (398)
T ss_dssp             SCEEETTEEECTTCEEEEEHHHHHTCTTTS-SSTTSCCTTCSSC-----------CCCTTCCSTTCCTTHHHHHHHHHHH
T ss_pred             CCeeECCEEECCCCEEEeChhhhcCChhhC-CCCCeeCCCCCCC-----------CCCcCCCCCcCCcCHHHHHHHHHHH
Confidence            466679999999999999999999999999 9999999999842           3899999999999999999999999


Q ss_pred             HHHHHhcc-EEEeecCCCcc-CcceEEeecCCCeeEEEEecCCC
Q 047842          424 ASAVIGNY-HVKVAKGHPVL-PRKSIILNMKYGLKVQLSKRSLL  465 (465)
Q Consensus       424 l~~ll~~f-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~r~~~  465 (465)
                      ++.|+++| ++++.++.++. ...+...+...+++|++++|..+
T Consensus       354 l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~lpv~~~p~~r~  397 (398)
T 2xkr_A          354 TERVLRRLPDLRLVADDSVLPLRPANFVSGLESMPVVFTPSPPL  397 (398)
T ss_dssp             HHHHHHHSTTCEESCTTCCCCBCCCSSBCCBSCCEEECCCCCCC
T ss_pred             HHHHHHhCCCceECCCcceecccCcccccCccceeEEecCCCCC
Confidence            99999999 59997543331 03344455666799999998764


No 48 
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=100.00  E-value=5.3e-56  Score=426.90  Aligned_cols=377  Identities=12%  Similarity=0.096  Sum_probs=271.6

Q ss_pred             CCCCCCCcccchHHHh-hcc-cchhHHHhHHHHhhcCceEEEecccc-cccceEEecChhhHHHhHhcCCCCCCCCch-h
Q 047842           24 SPMRNWPVLGMLPGLL-ANT-WYFHEFLAHDVLKKNRGTFEFTGPWF-AQMDLIITSDPMNVHYISSKNFSNYPKGPD-F   99 (465)
Q Consensus        24 Pgp~~~p~~G~~~~~~-~~~-~~~~~~~~~~~~~kyg~v~~~~~~~~-~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~-~   99 (465)
                      +-|++  ++|++.... ... .+++.++. ++++ ||||+++   ++ |+.++|+|++++.+++++++. ..|++++. .
T Consensus         6 ~~pp~--~~g~l~~~~~~~~~~~p~~~~~-~l~~-~gpv~~~---~~~g~~~~vvv~~~~~v~~vl~~~-~~fs~r~~~~   77 (428)
T 1cpt_A            6 TIPEH--IARTVILPQGYADDEVIYPAFK-WLRD-EQPLAMA---HIEGYDPMWIATKHADVMQIGKQP-GLFSNAEGSE   77 (428)
T ss_dssp             CSCHH--HHHHHHSSGGGGCHHHHHHHHH-HHHH-HCSEEEE---CCTTSCCEEEECSHHHHHHHHHCT-TTEESSSSCS
T ss_pred             ccchh--hhcccCChhhhcccCCccHHHH-HHHH-hCCeeec---cccCCCCeEEEccHHHHHHHHcCc-hhccCccccc
Confidence            44555  889765431 011 34777888 8865 7999998   76 678999999999999999865 45655443 1


Q ss_pred             h-------h-h---hc---ccCCcccccCChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCcccc
Q 047842          100 R-------M-I---ME---PLGDGVLNADGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVD  165 (465)
Q Consensus       100 ~-------~-~---~~---~~~~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vd  165 (465)
                      .       . .   .+   ..+.+++..+|+.|+++|+++++.|+...++.+ .+.+++.+ +.+++.+.+   .++.+|
T Consensus        78 ~~~~~~~~~~~~~~~g~~~~~~~~l~~~~g~~~~~~Rr~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~---~~~~~d  152 (428)
T 1cpt_A           78 ILYDQNNEAFMRSISGGCPHVIDSLTSMDPPTHTAYRGLTLNWFQPASIRKL-EENIRRIA-QASVQRLLD---FDGECD  152 (428)
T ss_dssp             SCCCHHHHHHHHHHTTTSSCSSCCGGGCCTTHHHHHHHHHHTTSSHHHHGGG-HHHHHHHH-HHHHHHHHT---SSSEEE
T ss_pred             cCCcccccchhccccccccccccccccCChHHHHHHHHHhhhhhCHHHHHHH-HHHHHHHH-HHHHHHHHH---hCCCee
Confidence            1       1 1   10   113578889999999999999999999999888 78888887 666666653   235799


Q ss_pred             HHHH-HHHHHHHHHHHHHhCCCCCCCCCCCccchHHHHHHHHHHHHHH--------hhhchhHHH-------HHHHHhhh
Q 047842          166 LQDV-LKRFAFDNICMLVLGIDPNYLSVEFPQTVYANAFNTMEQALLY--------RHIVPKICW-------KLQKWLQI  229 (465)
Q Consensus       166 l~~~-~~~~~~~i~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~p~~~~-------~~~~~~~~  229 (465)
                      +... ...+++++++++ ||.+.+..      ..+......+......        ....+....       .+.+++..
T Consensus       153 ~~~~~~~~~~~~vi~~~-fG~~~~~~------~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~  225 (428)
T 1cpt_A          153 FMTDCALYYPLHVVMTA-LGVPEDDE------PLMLKLTQDFFGVHEPDEQAVAAPRQSADEAARRFHETIATFYDYFNG  225 (428)
T ss_dssp             HHHHTTTTHHHHHHHHH-HTCCGGGH------HHHHHHHHTTTCC----------------CHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHhhhHHHHHHHH-cCCCHhHH------HHHHHHHHHHHhcccccccccccccccchhhHHHHHHHHHHHHHHHHH
Confidence            9755 467999999999 99876421      1222222211110000        000000000       11111111


Q ss_pred             chHHHHH--------Hhhhh---ccCCchHHHHHHHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccc
Q 047842          230 GEEKKLS--------RAWKL---SIDSSTSFLRDTAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHK  298 (465)
Q Consensus       230 ~~~~~~~--------~~~~~---~~dl~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~  298 (465)
                      ..+++.+        .....   -..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++       
T Consensus       226 ~i~~r~~~~~~dll~~ll~~~~~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~-------  298 (428)
T 1cpt_A          226 FTVDRRSCPKDDVMSLLANSKLDGNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLALAKSDPA-------  298 (428)
T ss_dssp             HHHHHTTSCCSSHHHHHHHCBSSSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG-------
T ss_pred             HHHHHHcCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHhHH-------
Confidence            1111100        00000   01378999999999999999999999999999999999999999999976       


Q ss_pred             cccCcccccccChhhhccchhHHHHHhhhCCCCCCCcCcceeccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCC
Q 047842          299 KEEDGERRFFFNTKQANNLVYLHAALCETLRLYPPVPYNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCL  378 (465)
Q Consensus       299 ~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~  378 (465)
                                          |++|||+|+||++|+++...|.+.+ |+.++||.|||||.|+++.+++||||++| +||+
T Consensus       299 --------------------~l~a~i~E~lRl~p~~~~~~R~~~~-d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~  356 (428)
T 1cpt_A          299 --------------------LIPRLVDEAVRWTAPVKSFMRTALA-DTEVRGQNIKRGDRIMLSYPSANRDEEVF-SNPD  356 (428)
T ss_dssp             --------------------GHHHHHHHHHHHHCCBCCCEEEESS-CEEETTEEECTTCEEEECHHHHTTCTTTC-SSTT
T ss_pred             --------------------HHHHHHHHHHHhCCcccccceeeCC-CeeECCEEECCCCEEEeCHHHhCCChhhC-CChh
Confidence                                7899999999999999975555554 56679999999999999999999999999 9999


Q ss_pred             CcCCCCCCCCCCcccccCCccccccCCCCCCCcChHHHHHHHHHHHHHHHhccE-EEeecCCCccCcceEEeecCCCeeE
Q 047842          379 EFKPERWISEKGCIVHVPTYKFTAFHAGPRNCLGKDKALIQMKMVASAVIGNYH-VKVAKGHPVLPRKSIILNMKYGLKV  457 (465)
Q Consensus       379 ~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~  457 (465)
                      +|+||||..           .++|||+|+|.|+|++||++|++++++.|+++|+ +++.+...+  ..+.......+++|
T Consensus       357 ~F~PeR~~~-----------~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~--~~~~~~~~~~~lpv  423 (428)
T 1cpt_A          357 EFDITRFPN-----------RHLGFGWGAHMCLGQHLAKLEMKIFFEELLPKLKSVELSGPPRL--VATNFVGGPKNVPI  423 (428)
T ss_dssp             SCCTTCCSC-----------CCCTTCCSTTCCTTHHHHHHHHHHHHHHHGGGEEEEEESSCCEE--CCCSSBCSEEECEE
T ss_pred             hcCCCCCCC-----------CCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCceeCCCccc--ccCccccCcceeeE
Confidence            999999941           2899999999999999999999999999999997 888643222  22333344456899


Q ss_pred             EEEec
Q 047842          458 QLSKR  462 (465)
Q Consensus       458 ~~~~r  462 (465)
                      +++||
T Consensus       424 ~~~p~  428 (428)
T 1cpt_A          424 RFTKA  428 (428)
T ss_dssp             EEEEC
T ss_pred             EeeCC
Confidence            99886


No 49 
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=100.00  E-value=6e-56  Score=421.92  Aligned_cols=355  Identities=14%  Similarity=0.123  Sum_probs=267.6

Q ss_pred             chhHHHhHHHHhhcCceEEEecccc-cccceEEecChhhHHHhHhcCCCCCCCCchhhhhh-c-ccCCc--ccccCC---
Q 047842           44 YFHEFLAHDVLKKNRGTFEFTGPWF-AQMDLIITSDPMNVHYISSKNFSNYPKGPDFRMIM-E-PLGDG--VLNADG---  115 (465)
Q Consensus        44 ~~~~~~~~~~~~kyg~v~~~~~~~~-~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~~~~~-~-~~~~~--l~~~~g---  115 (465)
                      +++.++. ++ ++|||||++   ++ ++.+.|+|+||+.+++++.++  .|.+++...... . ..+.+  ++..+|   
T Consensus        27 ~p~~~~~-~l-~~yGpv~~~---~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~l~~~~g~~~   99 (404)
T 2xbk_A           27 KLSPLLR-AL-QDRGPIHRV---RTPAGDEAWLVTRHAELKQLLHDE--RIGRTHPDPPSAAQYVRSPFLDLLISDADAE   99 (404)
T ss_dssp             BCCHHHH-HH-HHHCSEEEE---ECTTSCEEEEECSHHHHHHHTTCT--TEESBCSSGGGSCCSSCCHHHHTTCBCSCHH
T ss_pred             CccHHHH-HH-HhhCCEeee---ccCCCceEEEEcCHHHHHHHHcCC--CCCCCccccccCCcccccccccceeeCCCCC
Confidence            4677888 88 899999999   76 789999999999999999874  465554432211 2 23455  888899   


Q ss_pred             ---hhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHH-HHHHHHHHHHHHhCCCCCCCC
Q 047842          116 ---DLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVL-KRFAFDNICMLVLGIDPNYLS  191 (465)
Q Consensus       116 ---~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~i~~~~~fG~~~~~~~  191 (465)
                         +.|+++|+++.+.|+...++.+ .+.+++.+ +.+++.+..   .++++|+...+ ..+++++++. +||.+.+.  
T Consensus       100 ~~~~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~ll~~l~~---~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--  171 (404)
T 2xbk_A          100 SGRRQHAETRRLLTPLFSARRVLEM-QPKVEEAA-DTLLDAFIA---QGPPGDLHGELTVPFALTVLCE-VIGVPPQR--  171 (404)
T ss_dssp             HHHHHHHHHHHHHGGGGCHHHHHHH-HHHHHHHH-HHHHHHHHH---TCSSEEHHHHTHHHHHHHHHHH-HHTCCGGG--
T ss_pred             CCCchHHHHHHHhhhhcCHHHHHHH-HHHHHHHH-HHHHHHHHh---cCCCeeHHHHHHHHHHHHHHHH-HhCCCHHH--
Confidence               9999999999999999999888 78888887 666666652   35579998766 5699999998 69987542  


Q ss_pred             CCCccchHHHHHHHHHHHHHHhhhchhHHHHHHHHhhhchHHHHHHh-------hhhccCCchHHHHHHHHHHhhcchhh
Q 047842          192 VEFPQTVYANAFNTMEQALLYRHIVPKICWKLQKWLQIGEEKKLSRA-------WKLSIDSSTSFLRDTAFSFLGAGNDT  264 (465)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-------~~~~~dl~~~~i~~~~~~~~~ag~~t  264 (465)
                          ...+......+....... ........+..++....+++.+..       ... ..++++++..++..+++||+||
T Consensus       172 ----~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~l~~-~~ls~~ei~~~~~~l~~AG~dT  245 (404)
T 2xbk_A          172 ----RAELTTLLAGIAKLDDRE-GAVRAQDDLFGYVAGLVEHKRAEPGPDIISRLND-GELTEDRVAHLAMGLLFAGLDS  245 (404)
T ss_dssp             ----HHHHHHHHHHHTBSSCHH-HHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHS-SSCCHHHHHHHHHHHHHHTTHH
T ss_pred             ----HHHHHHHHHHHHhccCcH-HHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhhc-CCCCHHHHHHHHHHHHHhchHH
Confidence                122333332221100000 000001111122221111111100       000 1489999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhHHHHHhhhCCCCCCCc--Ccceecc
Q 047842          265 ISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYLHAALCETLRLYPPVP--YNHKIAG  342 (465)
Q Consensus       265 t~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~--~~~r~~~  342 (465)
                      |+++++|++++|++||++|+|+++|++                           |++|||+|+||++|+++  ...|.+.
T Consensus       246 ta~~l~~~l~~L~~~P~~~~~l~~E~~---------------------------~l~a~i~E~lRl~p~~~~~~~~R~~~  298 (404)
T 2xbk_A          246 VASIMDNGVVLLAAHPDQRAAALADPD---------------------------VMARAVEEVLRTARAGGSVLPPRYAS  298 (404)
T ss_dssp             HHHHHHHHHHHHHHCHHHHHHHHHCHH---------------------------HHHHHHHHHHHHSCSSCCBCSCEEES
T ss_pred             HHHHHHHHHHHHHhCHHHHHHHHhCHH---------------------------HHHHHHHHHHHhCCCccccccceeEC
Confidence            999999999999999999999999987                           78999999999999999  4555554


Q ss_pred             CccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccccccCCCCCCCcChHHHHHHHHH
Q 047842          343 QADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKFTAFHAGPRNCLGKDKALIQMKM  422 (465)
Q Consensus       343 ~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~  422 (465)
                       +|+.++||.|||||.|+++.+++||||++| +||++|+||||.           ..++|||+|+|.|+|++||++|+++
T Consensus       299 -~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~lpFG~G~r~C~G~~lA~~e~~~  365 (404)
T 2xbk_A          299 -EDMEFGGVTIRAGDLVLFDLGLPNFDERAF-TGPEEFDAARTP-----------NPHLTFGHGIWHCIGAPLARLELRT  365 (404)
T ss_dssp             -SCEEETTEEECTTCEEECBTHHHHTCTTTS-SSTTSCCTTCSS-----------CCCCTTEETTEECTTHHHHHHHHHH
T ss_pred             -CCeeECCEEECCCCEEEeChHHhcCChhhC-CCccccCCCCCC-----------CCCCCCCCCCcCCCcHHHHHHHHHH
Confidence             566679999999999999999999999999 999999999983           2489999999999999999999999


Q ss_pred             HHHHHHhcc-EEEeecC-CCccCcceEEeecCCCeeEEE
Q 047842          423 VASAVIGNY-HVKVAKG-HPVLPRKSIILNMKYGLKVQL  459 (465)
Q Consensus       423 ~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  459 (465)
                      +++.|+++| ++++.++ .++.+..+.+++...+++|++
T Consensus       366 ~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~  404 (404)
T 2xbk_A          366 MFTKLFTRLPELRPELPVEQLRLKEGQLSGGFAELRVVW  404 (404)
T ss_dssp             HHHHHHHHCTTCEESSCGGGCCBCSSBTTCCBSCCEEEC
T ss_pred             HHHHHHHhCCcceecCCCCcceeccCcccCCcceeeeeC
Confidence            999999999 7999764 344455555666666777763


No 50 
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=100.00  E-value=6e-56  Score=423.20  Aligned_cols=358  Identities=14%  Similarity=0.123  Sum_probs=269.5

Q ss_pred             chhHHHhHHHHhhcCceEEEecccccc--cceEEecChhhHHHhHhcCCCCCCCCchhhh---hh-cc--c-CCcccccC
Q 047842           44 YFHEFLAHDVLKKNRGTFEFTGPWFAQ--MDLIITSDPMNVHYISSKNFSNYPKGPDFRM---IM-EP--L-GDGVLNAD  114 (465)
Q Consensus        44 ~~~~~~~~~~~~kyg~v~~~~~~~~~~--~~~vvv~~p~~v~~i~~~~~~~~~~~~~~~~---~~-~~--~-~~~l~~~~  114 (465)
                      .+|.++. +++ +||||+++   ++++  .+.++|++|+.+++++.+  ..|.+.+.+..   .. ..  . +.+++..+
T Consensus        28 ~p~~~~~-~l~-~~Gpv~~~---~~~~g~~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~d  100 (411)
T 2dkk_A           28 EFDPVLA-ELM-REGPLTRV---RLPHGEGWAWLATRYDDVKAITND--PRFGRAEVTQRQITRLAPHFKPRPGSLAFAD  100 (411)
T ss_dssp             CCCHHHH-HHH-TTCSEEEE---ECSBSBSCEEEECSHHHHHHHTTC--TTEESGGGGGSCBCBSSSCCCCCTTCSTTCC
T ss_pred             cccHHHH-HHH-hcCCeEee---ecCCCceeEEEEcCHHHHHHHHcC--CCcccCCCCCCCccccccchhccccccccCC
Confidence            4557888 887 89999998   6544  789999999999999986  35666544321   11 22  1 56788899


Q ss_pred             ChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHHH-HHHHHHHHHHHhCCCCCCCCCC
Q 047842          115 GDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVLK-RFAFDNICMLVLGIDPNYLSVE  193 (465)
Q Consensus       115 g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~-~~~~~i~~~~~fG~~~~~~~~~  193 (465)
                      |+.|+++|+++++.|+...++.+ .+.+.+.+ +.+++.+..   .++++|+...+. .+++++++. +||.+.+.    
T Consensus       101 g~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~---~g~~~dl~~~~~~~~~~~vi~~-l~G~~~~~----  170 (411)
T 2dkk_A          101 QPDHNRLRRAVAGAFTVGATKRL-RPRAQEIL-DGLVDGILA---EGPPADLVERVLEPFPIAVVSE-VMGVPAAD----  170 (411)
T ss_dssp             TTHHHHHHHHHGGGSSHHHHHHH-HHHHHHHH-HHHHHHHHH---HCSCEEHHHHTTTHHHHHHHHH-HHTCCSSH----
T ss_pred             chHHHHHHHHhhHhhCHHHHHHH-HHHHHHHH-HHHHHHHHh---cCCCeehHHHHHHHHHHHHHHH-HhCCCHHH----
Confidence            99999999999999999999988 78888887 666666653   345799997775 699999999 59987642    


Q ss_pred             CccchHHHHHHHHHHHHHHhhhchhHHHHHHHHhhhch------------HHHHHHhhhhccCCchHHHHHHHHHHhhcc
Q 047842          194 FPQTVYANAFNTMEQALLYRHIVPKICWKLQKWLQIGE------------EKKLSRAWKLSIDSSTSFLRDTAFSFLGAG  261 (465)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~------------~~~~~~~~~~~~dl~~~~i~~~~~~~~~ag  261 (465)
                        ...+......+................+..++....            ...++.  ..-..++++++.++++.+++||
T Consensus       171 --~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~dll~~ll~~--~~~~~ls~~el~~~~~~l~~AG  246 (411)
T 2dkk_A          171 --RERVHSWTRQIISTSGGAEAAERAKRGLYGWITETVRARAGSEGGDVYSMLGAA--VGRGEVGETEAVGLAGPLQIGG  246 (411)
T ss_dssp             --HHHHHHHHGGGCSSCSCSHHHHHHHHHHHHHHHHHHHTTTTCCSSCHHHHHHHH--HHTTSSCTTSHHHHHHHHHHTH
T ss_pred             --HHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHh--cCCCCCCHHHHHHHHHHHHHhh
Confidence              112222111110000000000000001111111100            011111  1112589999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhHHHHHhhhCCCCCCCc-C-cce
Q 047842          262 NDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYLHAALCETLRLYPPVP-Y-NHK  339 (465)
Q Consensus       262 ~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~-~-~~r  339 (465)
                       |||+++++|++++|++||++|+||++|++                           |++|||+|+||++|+++ . ..|
T Consensus       247 -eTta~~l~~~l~~L~~~P~~~~~l~~E~~---------------------------~l~a~i~E~lRl~p~~~~~~~~R  298 (411)
T 2dkk_A          247 -EAVTHNVGQMLYLLLTRRELMARMRERPG---------------------------ARGTALDELLRWISHRTSVGLAR  298 (411)
T ss_dssp             -HHHHHHHHHHHHHHHHSHHHHHHHHHCTT---------------------------CCHHHHHHHHHHSCCBSSCCCCE
T ss_pred             -HHHHHHHHHHHHHHHhCHHHHHHHHhCHH---------------------------HHHHHHHHHHhhCCccccCccce
Confidence             99999999999999999999999999986                           68999999999999999 5 455


Q ss_pred             eccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccccccCCCCCCCcChHHHHHH
Q 047842          340 IAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKFTAFHAGPRNCLGKDKALIQ  419 (465)
Q Consensus       340 ~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e  419 (465)
                      .+. +|+.++||.|||||.|+++.+++||||++| +||++|+|+||.           ..++|||+|+|.|+|++||++|
T Consensus       299 ~~~-~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f-~dp~~F~PeR~~-----------~~~l~FG~G~r~C~G~~lA~~e  365 (411)
T 2dkk_A          299 IAL-EDVEVHGTRIAAGEPVYVSYLAANRDPDVF-PDPDRIDLDRDP-----------NPHLAYGNGHHFCTGAVLARMQ  365 (411)
T ss_dssp             EES-SCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCCSCSS-----------CCCCTTCCSTTSCTTHHHHHHH
T ss_pred             EEC-CCEEECCEEECCCCEEEeChhhhcCChhhC-CCCCCCCCCCCC-----------CCCCCCCCCCCCCcCHHHHHHH
Confidence            554 466779999999999999999999999999 999999999995           2489999999999999999999


Q ss_pred             HHHHHHHHHhcc-EEEeecC-CCccCcceEEeecCCCeeEEEEecC
Q 047842          420 MKMVASAVIGNY-HVKVAKG-HPVLPRKSIILNMKYGLKVQLSKRS  463 (465)
Q Consensus       420 ~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~  463 (465)
                      ++++++.|+++| ++++.++ .++.+..+.+++...+++|++++|.
T Consensus       366 ~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~~R~  411 (411)
T 2dkk_A          366 TELLVDTLLERLPGLRLAVPAEQVAWRRKTMIRGPRTLPCTWHHHH  411 (411)
T ss_dssp             HHHHHHHHHHHSTTCEESSCGGGCCBCCSSSBCCBSCCEEECCCCC
T ss_pred             HHHHHHHHHHHCCCcEECCCccccccccCcccCCcceeEEEeccCC
Confidence            999999999999 8999765 3444544556677778999999884


No 51 
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=100.00  E-value=2.1e-55  Score=419.46  Aligned_cols=351  Identities=19%  Similarity=0.209  Sum_probs=269.2

Q ss_pred             chhHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCchh--h----------hh-hc---ccC
Q 047842           44 YFHEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPDF--R----------MI-ME---PLG  107 (465)
Q Consensus        44 ~~~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~--~----------~~-~~---~~~  107 (465)
                      +++.++. ++ ++|||+|++   ++|+.++|++++|+.+++++.++  .|++++..  .          .. ..   ..+
T Consensus        15 ~p~~~~~-~l-~~yGpv~~~---~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (404)
T 1z8o_A           15 DWYRTYA-EL-RETAPVTPV---RFLGQDAWLVTGYDEAKAALSDL--RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFA   87 (404)
T ss_dssp             SHHHHHH-HH-HHHCSEEEE---EETTEEEEEECSHHHHHHHHHCT--TEECCTTCCCTTCCCCCGGGTTCCHHHHHHHS
T ss_pred             CcHHHHH-HH-HhcCCeeee---cCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccchhhhcc
Confidence            4788888 88 899999999   88888999999999999999875  46555432  1          11 11   146


Q ss_pred             CcccccCChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHH-HHHHHHHHHHHHhCCC
Q 047842          108 DGVLNADGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVL-KRFAFDNICMLVLGID  186 (465)
Q Consensus       108 ~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~i~~~~~fG~~  186 (465)
                      .+++..+|+.|+++|+++++.|+...++.+ .+.+++.+ +.+++.+..    ++++|+...+ ..+++++++.+ ||.+
T Consensus        88 ~~l~~~~g~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~----~~~~d~~~~~~~~~~~~vi~~~-~G~~  160 (404)
T 1z8o_A           88 TNMGTSDPPTHTRLRKLVSQEFTVRRVEAM-RPRVEQIT-AELLDEVGD----SGVVDIVDRFAHPLPIKVICEL-LGVD  160 (404)
T ss_dssp             SSGGGCCTTHHHHHHHHHHTTSCHHHHHHT-HHHHHHHH-HHHHHTSCS----SSEEEHHHHTTTHHHHHHHHHH-TTCC
T ss_pred             cccccCCCcHHHHHHHHHHHhhCHHHHHHH-HHHHHHHH-HHHHHhhhh----cCCcchHHHHhHHHHHHHHHHH-hCCC
Confidence            778889999999999999999999999888 78888887 666665542    4579998765 68999999985 9987


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhhhchh------HHHHHHHHhhhchHHHH--------HHhhhh----ccCCchH
Q 047842          187 PNYLSVEFPQTVYANAFNTMEQALLYRHIVPK------ICWKLQKWLQIGEEKKL--------SRAWKL----SIDSSTS  248 (465)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~~~~~~~~~~~~~~~~~--------~~~~~~----~~dl~~~  248 (465)
                      .+..      ..+......+.. .    ..|.      ....+..++....+++.        ......    -..++++
T Consensus       161 ~~~~------~~~~~~~~~~~~-~----~~p~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~~~l~~~  229 (404)
T 1z8o_A          161 EKYR------GEFGRWSSEILV-M----DPERAEQRGQAAREVVNFILDLVERRRTEPGDDLLSALIRVQDDDDGRLSAD  229 (404)
T ss_dssp             GGGT------TTHHHHHHHHHC-C----CGGGHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCEETTTEECCHH
T ss_pred             HHHH------HHHHHHHHHHhc-c----CChhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhhhcccCCCCCHH
Confidence            6421      223333333221 0    0011      01111122221111111        111111    1137899


Q ss_pred             HHHHHHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhHHHHHhhhC
Q 047842          249 FLRDTAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYLHAALCETL  328 (465)
Q Consensus       249 ~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~l  328 (465)
                      ++..++..+++||+|||+++++|++++|++||++|+|+++|++                           |++|||+|+|
T Consensus       230 ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------------------~l~a~i~E~l  282 (404)
T 1z8o_A          230 ELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPS---------------------------ALPNAVEEIL  282 (404)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG---------------------------GHHHHHHHHH
T ss_pred             HHHHHHHHHHhcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHH---------------------------hHHHHHHHHH
Confidence            9999999999999999999999999999999999999999875                           6899999999


Q ss_pred             CCCCCCcCcceeccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccccccCCCCC
Q 047842          329 RLYPPVPYNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKFTAFHAGPR  408 (465)
Q Consensus       329 Rl~p~~~~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r  408 (465)
                      |++|+++...|.+ .+|+.++||.|||||.|+++.+++||||++| +||++|+||||.           ..++|||+|+|
T Consensus       283 Rl~p~~~~~~R~~-~~d~~l~g~~Ip~Gt~V~~~~~~~~rd~~~~-~dP~~F~PeR~~-----------~~~~~FG~G~r  349 (404)
T 1z8o_A          283 RYIAPPETTTRFA-AEEVEIGGVAIPQYSTVLVANGAANRDPKQF-PDPHRFDVTRDT-----------RGHLSFGQGIH  349 (404)
T ss_dssp             HHTCSSCCEEEEE-SSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTSCC-----------TTCCTTCSSTT
T ss_pred             HhcCCccCcceEE-CCCEEECCEEECCCCEEEecchhhcCCcccC-CChhhcCCCCCC-----------CCccCCCCCCc
Confidence            9999999555555 4466669999999999999999999999999 999999999983           24899999999


Q ss_pred             CCcChHHHHHHHHHHHHHHHhcc-EEEeecC-CCccCcceEEeecCCCeeEEE
Q 047842          409 NCLGKDKALIQMKMVASAVIGNY-HVKVAKG-HPVLPRKSIILNMKYGLKVQL  459 (465)
Q Consensus       409 ~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  459 (465)
                      .|+|++||++|++++++.|+++| ++++.++ .++.+..+.+++...+++|++
T Consensus       350 ~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~l~v~~  402 (404)
T 1z8o_A          350 FCMGRPLAKLEGEVALRALFGRFPALSLGIDADDVVWRRSLLLRGIDHLPVRL  402 (404)
T ss_dssp             CCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCCCCCSSSCCCSCCEEET
T ss_pred             cCCcHHHHHHHHHHHHHHHHHhCCCcEecCCCCcceeccccccCCcceeEEEe
Confidence            99999999999999999999999 5999754 344555566667777888875


No 52 
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=100.00  E-value=1.8e-55  Score=421.71  Aligned_cols=336  Identities=15%  Similarity=0.137  Sum_probs=257.7

Q ss_pred             chhHHHhHHHHhhcCceEEEeccccc-ccceEEecChhhHHHhHhcCCCCCCCCc---hhhhhhc------ccCCccccc
Q 047842           44 YFHEFLAHDVLKKNRGTFEFTGPWFA-QMDLIITSDPMNVHYISSKNFSNYPKGP---DFRMIME------PLGDGVLNA  113 (465)
Q Consensus        44 ~~~~~~~~~~~~kyg~v~~~~~~~~~-~~~~vvv~~p~~v~~i~~~~~~~~~~~~---~~~~~~~------~~~~~l~~~  113 (465)
                      +++.++. +++++ ||||++   +++ +.++|+|++|+.+++++.++  .|++.+   .+.....      ..+.+++..
T Consensus        30 dp~~~~~-~l~~~-Gpv~~~---~~~~g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  102 (417)
T 3tyw_A           30 AAPAEYA-ALRTD-DPVARV---TLPTRREAWVVTRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFRPFIRT  102 (417)
T ss_dssp             SCCTHHH-HHHHT-CTEEEE---ECTTSCEEEEECCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCCCGGGC
T ss_pred             CchHHHH-HHHhh-CCeeee---ecCCCCCeEEEcCHHHHHHHHcCC--CcccCCccccccccccccccccccccchhhc
Confidence            5778888 99887 999999   775 58999999999999999875  454432   1221111      245688999


Q ss_pred             CChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHH-HHHHHHHHHHHHhCCCCCCCCC
Q 047842          114 DGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVL-KRFAFDNICMLVLGIDPNYLSV  192 (465)
Q Consensus       114 ~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~i~~~~~fG~~~~~~~~  192 (465)
                      +|+.|+++|+++++.|+...++.+ .+.+.+.+ +.+++.+.+   .++++|+...+ ..++.++++.+ ||.+.+..  
T Consensus       103 dg~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~---~g~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~--  174 (417)
T 3tyw_A          103 DAPEHTRYRRMLLPAFTVRRVRAM-RPAVQARV-DEILDGMLA---AGGPVDLVSAYANAVSTSVICEL-LGIPRHDL--  174 (417)
T ss_dssp             CHHHHHHHHHHHGGGGCHHHHHHT-HHHHHHHH-HHHHHHHHH---HCSSEEHHHHTHHHHHHHHHHHH-HTCCTTTT--
T ss_pred             CCcHHHHHHHHHHhhhCHHHHHHH-HHHHHHHH-HHHHHHHHh---hCCCcchHHHHHHHHHHHHHHHH-hCCCHHHH--
Confidence            999999999999999999999888 78888887 666666653   45679999987 58999999997 99877532  


Q ss_pred             CCccchHHHHHHHHHHHHHHhhhchhHHHHHHHHhhhchHHHH--------HHhh---hhccCCchHHHHHHHHHHhhcc
Q 047842          193 EFPQTVYANAFNTMEQALLYRHIVPKICWKLQKWLQIGEEKKL--------SRAW---KLSIDSSTSFLRDTAFSFLGAG  261 (465)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~--------~~~~---~~~~dl~~~~i~~~~~~~~~ag  261 (465)
                          ..+......+................+..++....+++.        ....   ..-..++++++..+++.+++||
T Consensus       175 ----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~~ls~~el~~~~~~l~~AG  250 (417)
T 3tyw_A          175 ----EFFRDVTRISGSRNSTAEQVSEALGGLFGLLGGLVAERREEPRDDLISKLVTDHLVPGNVTTEQLLSTLGITINAG  250 (417)
T ss_dssp             ----THHHHHHHHHHSSSSCTTHHHHHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHTTTTTSSCHHHHHHHHHHHHHHH
T ss_pred             ----HHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHhhCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHhhh
Confidence                223333222211100000000111111222221111111        0000   0111479999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhHHHHHhhhCCCCCCCcCcceec
Q 047842          262 NDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYLHAALCETLRLYPPVPYNHKIA  341 (465)
Q Consensus       262 ~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r~~  341 (465)
                      +|||+++++|++++|++||++|+|+++|++                           |++|||+|+||++|+++...+|.
T Consensus       251 ~eTta~~l~~~l~~L~~~P~~~~~l~~E~~---------------------------~l~a~i~E~lRl~p~~~~~~~R~  303 (417)
T 3tyw_A          251 RETTTSMIALSTLLLLDRPELPAELRKDPD---------------------------LMPAAVDELLRVLSVADSIPLRV  303 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHCTHHHHHHHHCGG---------------------------GHHHHHHHHHHHHCSCTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHcCHHHHHHHHhChH---------------------------HHHHHHHHHHHhccccccCceeE
Confidence            999999999999999999999999999986                           78999999999999999865555


Q ss_pred             cCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccccccCCCCCCCcChHHHHHHHH
Q 047842          342 GQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKFTAFHAGPRNCLGKDKALIQMK  421 (465)
Q Consensus       342 ~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~  421 (465)
                      +.+|+.++||.|||||.|+++.+++||||++| +||++|+|+||.           ..++|||.|+|.|+|++||++|++
T Consensus       304 ~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~l~FG~G~r~C~G~~lA~~e~~  371 (417)
T 3tyw_A          304 AAEDIELSGRTVPADDGVIALLAGANHDPEQF-DDPERVDFHRTD-----------NHHVAFGYGVHQCVGQHLARLELE  371 (417)
T ss_dssp             ESSCEECSSCEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCSC-----------CCCCTTCCSTTCCSCHHHHHHHHH
T ss_pred             eCCCeEECCEEECCCCEEEEehhhhcCChhhc-CCccccCCCCCC-----------CCCCCCCCCCccCcCHHHHHHHHH
Confidence            55677779999999999999999999999999 999999999993           248999999999999999999999


Q ss_pred             HHHHHHHhcc-EEEeec
Q 047842          422 MVASAVIGNY-HVKVAK  437 (465)
Q Consensus       422 ~~l~~ll~~f-~~~~~~  437 (465)
                      ++++.|+++| ++++++
T Consensus       372 ~~l~~ll~~fp~~~l~~  388 (417)
T 3tyw_A          372 VALETLLRRVPTLRLAG  388 (417)
T ss_dssp             HHHHHHHHHCTTCEECS
T ss_pred             HHHHHHHHhCCcccccC
Confidence            9999999999 999974


No 53 
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=100.00  E-value=2.3e-55  Score=418.47  Aligned_cols=355  Identities=15%  Similarity=0.144  Sum_probs=266.3

Q ss_pred             chhHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCchhhh---------hhcccCCcccccC
Q 047842           44 YFHEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPDFRM---------IMEPLGDGVLNAD  114 (465)
Q Consensus        44 ~~~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~~~---------~~~~~~~~l~~~~  114 (465)
                      +++.++. ++ ++|||||+ .     +.+.++|+||+.+++++.+  ..|.+++....         .....+.+++..+
T Consensus        14 ~p~~~~~-~l-~~yGpv~~-~-----g~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~   83 (397)
T 3buj_A           14 DPYPSYH-WL-LRHDPVHR-G-----AHRVWYVSRFADVRAVLGD--ERFARTGIRRFWTDLVGPGLLAEIVGDIILFQD   83 (397)
T ss_dssp             CCHHHHH-HH-HHHCSEEE-C-----GGGCEEECSHHHHHHHHTC--TTEESHHHHHHHHHHHCSSHHHHHHTTCGGGCC
T ss_pred             CchHHHH-HH-HhcCCeee-C-----CCCeEEEcCHHHHHHHHcC--CCcccCcccccccccccccccccccccccccCC
Confidence            3677777 66 58999875 3     3589999999999999986  35655433211         1122267788899


Q ss_pred             ChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHH-HHHHHHHHHHHHHhCCCCCCCCCC
Q 047842          115 GDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDV-LKRFAFDNICMLVLGIDPNYLSVE  193 (465)
Q Consensus       115 g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~-~~~~~~~i~~~~~fG~~~~~~~~~  193 (465)
                      |+.|+++|+++++.|+...++.+ .+.+.+.+ +.+++.+..    ++++|+... ...+++++++.+ ||.+.+.    
T Consensus        84 g~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~----~~~~dl~~~~~~~~~~~vi~~~-~G~~~~~----  152 (397)
T 3buj_A           84 EPDHGRLRGVVGPAFSPSALRRL-EPVIAGTV-DDLLRPALA----RGAMDVVDELAYPLALRAVLGL-LGLPAAD----  152 (397)
T ss_dssp             TTHHHHHHHHHGGGSSTTTTGGG-HHHHHHHH-HHHHHHHHT----TTEEEHHHHTHHHHHHHHHHHH-HTCCGGG----
T ss_pred             chhHHHHHHHHHHhcCHHHHHHH-HHHHHHHH-HHHHHHHhh----cCCeehHHHHHHHhHHHHHHHH-hCCCHHH----
Confidence            99999999999999999999887 78888887 666666542    347998755 578999999998 9987642    


Q ss_pred             CccchHHHHHHHHHHHHHHhhhchhHH-------HHHHHHhhhchHHHHHH--------hhhh-cc-CCchHHHHHHHHH
Q 047842          194 FPQTVYANAFNTMEQALLYRHIVPKIC-------WKLQKWLQIGEEKKLSR--------AWKL-SI-DSSTSFLRDTAFS  256 (465)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~p~~~-------~~~~~~~~~~~~~~~~~--------~~~~-~~-dl~~~~i~~~~~~  256 (465)
                        ...+......+...... ...+...       ..+..++....+++.+.        .... .. +++++++.+++..
T Consensus       153 --~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~ls~~ei~~~~~~  229 (397)
T 3buj_A          153 --WGAVGRWSRDVGRTLDR-GASAEDMRRGHAAIAEFADYVERALARRRREGGEDLLALMLDAHDRGLMSRNEIVSTVVT  229 (397)
T ss_dssp             --HHHHHHHHHHHHGGGCS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSHHHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred             --HHHHHHHHHHHHhhcCC-CCChHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHhhhcCCCCHHHHHHHHHH
Confidence              12233333322211100 0001100       11111221111111111        0000 01 2899999999999


Q ss_pred             HhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhHHHHHhhhCCCCCCCcC
Q 047842          257 FLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYLHAALCETLRLYPPVPY  336 (465)
Q Consensus       257 ~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~  336 (465)
                      +++||+|||+++++|++++|++||++|+|+++|++                           |++|||+|+||++|+++.
T Consensus       230 ~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------------------~l~a~i~E~lRl~p~~~~  282 (397)
T 3buj_A          230 FIFTGHETVASQVGNAVLSLLAHPDQLDLLRRRPD---------------------------LLAQAVEECLRYDPSVQS  282 (397)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHCGG---------------------------GHHHHHHHHHHHSCSCCE
T ss_pred             HHHcCchHHHHHHHHHHHHHHhCHHHHHHHhhCHH---------------------------HHHHHHHHHHhhcCcccC
Confidence            99999999999999999999999999999999875                           899999999999999995


Q ss_pred             cceeccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccccccCCCCCCCcChHHH
Q 047842          337 NHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKFTAFHAGPRNCLGKDKA  416 (465)
Q Consensus       337 ~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A  416 (465)
                      ..|.+ .+|+.++||.|||||.|+++.+++||||++| +||++|+||||.           ..++|||+|+|.|+|++||
T Consensus       283 ~~R~~-~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~~-----------~~~~~FG~G~r~C~G~~lA  349 (397)
T 3buj_A          283 NTRQL-DVDVELRGRRLRRDDVVVVLAGAANRDPRRY-DRPDDFDIERDP-----------VPSMSFGAGMRYCLGSYLA  349 (397)
T ss_dssp             EEEEE-SSCEEETTEEECTTCEEEEEHHHHTTCTTTC-SSTTSCCTTSCC-----------CCCSTTCCGGGCCTTHHHH
T ss_pred             cceEE-CCCEEECCEEECCCCEEEEChhhhCCCcccc-CCccccCCCCCC-----------CCCCCCCCCCccCCCHHHH
Confidence            45545 4566679999999999999999999999999 999999999994           2379999999999999999


Q ss_pred             HHHHHHHHHHHHhcc-EEEeecC-CCccCcceEEeecCCCeeEEEEecC
Q 047842          417 LIQMKMVASAVIGNY-HVKVAKG-HPVLPRKSIILNMKYGLKVQLSKRS  463 (465)
Q Consensus       417 ~~e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~  463 (465)
                      ++|++++++.| ++| ++++.++ .+..+..+.++++..+++|++++|.
T Consensus       350 ~~e~~~~l~~l-~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~rg  397 (397)
T 3buj_A          350 RTQLRAAVAAL-ARLPGLRLGCASDALAYQPRTMFRGLASLPIAFTPGG  397 (397)
T ss_dssp             HHHHHHHHHHH-HTSTTCEESSCSTTCCBCSCSSCCCBSCCEEECCTTC
T ss_pred             HHHHHHHHHHH-hcCCCceeCCCCcccccccccccCCCcceeEEecCCC
Confidence            99999999999 999 8999865 4444555666777789999999883


No 54 
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=100.00  E-value=1.9e-55  Score=423.64  Aligned_cols=366  Identities=16%  Similarity=0.163  Sum_probs=260.1

Q ss_pred             chhHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCchhhhhhcccCC-cccccCChhHHHHH
Q 047842           44 YFHEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPDFRMIMEPLGD-GVLNADGDLWKIQR  122 (465)
Q Consensus        44 ~~~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~g~~w~~~R  122 (465)
                      +++.++. ++ ++|||||++   ..++  .|+|++|+.++++++++ ..|++.+.........+. +++..+|+.|+++|
T Consensus        54 ~p~~~~~-~l-r~~gpv~~~---~~~~--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R  125 (441)
T 3nc3_A           54 NPYAYFS-QL-REEDPVHYE---ESID--SYFISRYHDVRYILQHP-DIFTTKSLVERAEPVMRGPVLAQMHGKEHSAKR  125 (441)
T ss_dssp             CGGGTHH-HH-HHHCSEEEE---TTTT--EEEECCHHHHHHHHHCT-TTEECCCTTSCCCCSCC-------------CCH
T ss_pred             ChHHHHH-HH-HhcCCEEEe---CCCC--EEEEcCHHHHHHHhcCc-ccccccccccccccccCCCccccCCcHHHHHHH
Confidence            4677777 66 689999988   4444  89999999999999886 446665543322233343 58889999999999


Q ss_pred             HHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHH-HHHHHHHHHHHHHHHhCCCCCCCCCCCccchHHH
Q 047842          123 KIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQ-DVLKRFAFDNICMLVLGIDPNYLSVEFPQTVYAN  201 (465)
Q Consensus       123 ~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~-~~~~~~~~~i~~~~~fG~~~~~~~~~~~~~~~~~  201 (465)
                      +++.+.|+...++.+ .+.+++.+ +.+++.+..    ++.+|+. +....+++++++. +||.+.+.      ...+..
T Consensus       126 r~~~~~fs~~~l~~~-~~~i~~~~-~~ll~~l~~----~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~------~~~~~~  192 (441)
T 3nc3_A          126 RIVVRSFIGDALDHL-SPLIKQNA-ENLLAPYLE----RGKSDLVNDFGKTFAVCVTMD-MLGLDKRD------HEKISE  192 (441)
T ss_dssp             HHHHHHHHHTHHHHH-HHHHHHHH-HHHHTTTTT----TTEEECCCCCHHHHHHHHHHH-HTTCCGGG------HHHHHH
T ss_pred             HHHHhhcCHHHHHHH-HHHHHHHH-HHHHHHHHh----cCCCcHHHHHHHHHHHHHHHH-HcCCCHHH------HHHHHH
Confidence            999999999999997 78888887 666665542    3468874 4456799999999 58986532      233444


Q ss_pred             HHHHHHHHHHHhhhch-------hHHHHHHHHhhhchHHHHHH--------hhh---hccCCchHHHHHHHHHHhhcchh
Q 047842          202 AFNTMEQALLYRHIVP-------KICWKLQKWLQIGEEKKLSR--------AWK---LSIDSSTSFLRDTAFSFLGAGND  263 (465)
Q Consensus       202 ~~~~~~~~~~~~~~~p-------~~~~~~~~~~~~~~~~~~~~--------~~~---~~~dl~~~~i~~~~~~~~~ag~~  263 (465)
                      ....+..........+       .....+..++....+++...        ...   .-..++++++.++++.+++||+|
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~rr~~~~~Dll~~Ll~~~~~~~~ls~~el~~~~~~ll~AG~e  272 (441)
T 3nc3_A          193 WHSGVADFITSISQSPEARAHSLWCSEQLSQYLMPVIKERRVNPGSDLISILCTSEYEGMALSDKDILALILNVLLAATE  272 (441)
T ss_dssp             HHHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSSHHHHHCC------CCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHhhhH
Confidence            4444433321100001       01111122222111111110        000   00137999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhHHHHHhhhCCCCCCCcCcceeccC
Q 047842          264 TISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYLHAALCETLRLYPPVPYNHKIAGQ  343 (465)
Q Consensus       264 tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r~~~~  343 (465)
                      ||+++++|++++|++||++|+++++|+.                           |+++||+|+||++|+++...|.+ .
T Consensus       273 TTa~~l~~~l~~L~~~P~~~~~l~~E~~---------------------------~l~a~i~E~LRl~pp~~~~~R~~-~  324 (441)
T 3nc3_A          273 PADKTLALMIYHLLNNPEQMNDVLADRS---------------------------LVPRAIAETLRYKPPVQLIPRQL-S  324 (441)
T ss_dssp             HHHHHHHHHHHHHHTSHHHHHHHHHCGG---------------------------GHHHHHHHHHHHSCSBCEEEEEE-S
T ss_pred             HHHHHHHHHHHHHHhCHHHHHHHHhCHH---------------------------HHHHHHHHhhhcCCcccCccEEE-C
Confidence            9999999999999999999999999875                           89999999999999999855555 4


Q ss_pred             ccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccccccCCCCCCCcChHHHHHHHHHH
Q 047842          344 ADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKFTAFHAGPRNCLGKDKALIQMKMV  423 (465)
Q Consensus       344 ~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~  423 (465)
                      +|+.++||.||||+.|+++.+++||||++| +||++|+|+||+.+... .......++|||+|+|.|+|++||++|++++
T Consensus       325 ~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f-~dP~~F~PeR~~~~~~~-~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~  402 (441)
T 3nc3_A          325 QDTVVGGMEIKKDTIVFCMIGAANRDPEAF-EQPDVFNIHREDLGIKS-AFSGAARHLAFGSGIHNCVGTAFAKNEIEIV  402 (441)
T ss_dssp             SCEESSSCEECTTCEEEEEHHHHHTCTTTS-SSTTSCCTTCTTSCGGG-TTSSSCSSCTTCCGGGCCTTHHHHHHHHHHH
T ss_pred             CCEEECCEEECCCCEEEechHHhcCChhhC-CCcccCCCCCCCccccc-ccCCCCCcccCCCCCccCCCHHHHHHHHHHH
Confidence            567779999999999999999999999999 99999999999765321 1112567999999999999999999999999


Q ss_pred             HHHHHhcc-EEEeecCCCccCcceEEeecCCCeeEEEEe
Q 047842          424 ASAVIGNY-HVKVAKGHPVLPRKSIILNMKYGLKVQLSK  461 (465)
Q Consensus       424 l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  461 (465)
                      ++.|+++| +|++.++ +..+..+.+.+...+++|+++|
T Consensus       403 l~~ll~~f~~~~l~~~-~~~~~~~~~~~~~~~lpv~~~~  440 (441)
T 3nc3_A          403 ANIVLDKMRNIRLEED-FCYAESGLYTRGPVSLLVAFDG  440 (441)
T ss_dssp             HHHHHHHSTTCEECTT-CCCCEECSSBCEESCCEEECC-
T ss_pred             HHHHHHhCcccEECCC-CcccccCccccCcceeEEEEec
Confidence            99999999 9999865 3344445556666778888764


No 55 
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=100.00  E-value=2.6e-55  Score=419.66  Aligned_cols=357  Identities=15%  Similarity=0.199  Sum_probs=265.8

Q ss_pred             chhHHHhHHHHhhcCceEEEecccc-cccceEEecChhhHHHhHhcCCCCCCCCchh-hh---hhc-ccCCcccccCChh
Q 047842           44 YFHEFLAHDVLKKNRGTFEFTGPWF-AQMDLIITSDPMNVHYISSKNFSNYPKGPDF-RM---IME-PLGDGVLNADGDL  117 (465)
Q Consensus        44 ~~~~~~~~~~~~kyg~v~~~~~~~~-~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~-~~---~~~-~~~~~l~~~~g~~  117 (465)
                      +++.++. ++ ++|||+|++   ++ |+.++|+|+||+.+++++.++  .|.+++.. ..   ... ..+.+++..+|+.
T Consensus        38 ~p~~~~~-~l-~~yGpv~~~---~~~g~~~~vvv~~~~~i~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~l~~~dg~~  110 (417)
T 2y5n_A           38 TLAGRYG-EL-QETEPVSRV---RPPYGEEAWLVTRYEDVRAVLGDG--RFVRGPSMTRDEPRTRPEMVKGGLLSMDPPE  110 (417)
T ss_dssp             CCCHHHH-HH-HHHCSEEEE---ECSBSCCEEEECSHHHHHHHHTCT--TEESGGGGTSCCCBSSSSCCCCSGGGCCTTH
T ss_pred             CchHHHH-HH-HhcCCeEee---ccCCCceEEEECCHHHHHHHHcCC--CcccCccccccccccCcccccccCccCCchH
Confidence            5778888 88 899999999   76 789999999999999999874  46555433 11   111 1356788899999


Q ss_pred             HHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHH-HHHHHHHHHHHHhCCCCCCCCCCCcc
Q 047842          118 WKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVL-KRFAFDNICMLVLGIDPNYLSVEFPQ  196 (465)
Q Consensus       118 w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~i~~~~~fG~~~~~~~~~~~~  196 (465)
                      |+++|+++.+.|+...++.+ .+.+++.+ +.+++.+..   +++++|+...+ ..+++++++. +||.+.+.      .
T Consensus       111 h~~~R~~l~~~fs~~~l~~~-~~~i~~~~-~~ll~~l~~---~~~~vdl~~~~~~~~~~~vi~~-~~G~~~~~------~  178 (417)
T 2y5n_A          111 HSRLRRLVVKAFTARRAESL-RPRAREIA-HELVDQMAA---TGQPADLVAMFARQLPVRVICE-LLGVPSAD------H  178 (417)
T ss_dssp             HHHHHHHHHHHSCHHHHHHT-HHHHHHHH-HHHHHHHHH---HCSSEEHHHHTTTTHHHHHHHH-HHTCCGGG------H
T ss_pred             HHHHHHHHhhhcCHHHHHHH-HHHHHHHH-HHHHHHHHh---CCCCeeHHHHHHHHhHHHHHHH-HcCCCHHH------H
Confidence            99999999999999999888 78888887 666666652   22279998776 4699999998 59987542      1


Q ss_pred             chHHHHHHHHHHHHHHh-hhchhHHHHHHHHhhhchHHHHH--------Hhhh---hccCCchHHHHHHHHHHhhcchhh
Q 047842          197 TVYANAFNTMEQALLYR-HIVPKICWKLQKWLQIGEEKKLS--------RAWK---LSIDSSTSFLRDTAFSFLGAGNDT  264 (465)
Q Consensus       197 ~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~--------~~~~---~~~dl~~~~i~~~~~~~~~ag~~t  264 (465)
                      ..+......+....... .........+..++....+++.+        ....   .-..++++++.++++.+++||+||
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~~ls~~ei~~~~~~l~~AG~eT  258 (417)
T 2y5n_A          179 DRFTRWSGAFLSTAEVTAEEMQEAAEQAYAYMGDLIDRRRKEPTDDLVSALVQARDQQDSLSEQELLDLAIGLLVAGYES  258 (417)
T ss_dssp             HHHHHHHHTTSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCCBTTBCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhhhccCCCCCHHHHHHHHHHHHHHhHHH
Confidence            12222222111100000 00000011111222211111111        0111   011478999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhHHHHHhhhCCCCCCCc--Ccceecc
Q 047842          265 ISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYLHAALCETLRLYPPVP--YNHKIAG  342 (465)
Q Consensus       265 t~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~--~~~r~~~  342 (465)
                      |+++++|++++|++||++|+|+++|++                           |++|||+|+||++|+++  ...|.+ 
T Consensus       259 ta~~l~~~l~~L~~~P~~~~~l~~E~~---------------------------~l~a~i~E~lRl~p~~~~~~~~R~~-  310 (417)
T 2y5n_A          259 TTTQIADFVYLLMTRPELRRQLLDRPE---------------------------LIPSAVEELTRWVPLGVGTAFPRYA-  310 (417)
T ss_dssp             HHHHHHHHHHHHHHCHHHHHHHHHCGG---------------------------GHHHHHHHHHHHCCCBSSCCSCEEE-
T ss_pred             HHHHHHHHHHHHHHCHHHHHHHHhCHH---------------------------HHHHHHHHHHHhcCCccccccceEe-
Confidence            999999999999999999999999875                           78999999999999999  455555 


Q ss_pred             CccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccccccCCCCCCCcChHHHHHHHHH
Q 047842          343 QADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKFTAFHAGPRNCLGKDKALIQMKM  422 (465)
Q Consensus       343 ~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~  422 (465)
                      .+|+.++||.|||||.|+++.+++||||++| +||++|+||||.           ..++|||+|+|.|+|++||++|+++
T Consensus       311 ~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~lpFG~G~r~C~G~~lA~~e~~~  378 (417)
T 2y5n_A          311 VEDVTLRGVTIRAGEPVLASTGAANRDQAQF-PDADRIDVDRTP-----------NQHLGFGHGVHHCLGAPLARVELQV  378 (417)
T ss_dssp             SSCEEETTEEECTTCEEEECHHHHTTCTTTS-TTTTSCCTTCSS-----------CCCCTTCCSTTSCTTHHHHHHHHHH
T ss_pred             CCCEEECCEEECCCCEEEeChhhhCCCcccC-CCccccCCCCCC-----------CCcCCCCCCCcCCcCHHHHHHHHHH
Confidence            4566679999999999999999999999999 999999999983           2489999999999999999999999


Q ss_pred             HHHHHHhcc-EEEeecC-CCccCcceEEeecCCCeeEEE
Q 047842          423 VASAVIGNY-HVKVAKG-HPVLPRKSIILNMKYGLKVQL  459 (465)
Q Consensus       423 ~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  459 (465)
                      +++.|+++| ++++.++ .++.+..+.+.+....++|++
T Consensus       379 ~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~  417 (417)
T 2y5n_A          379 ALEVLLQRLPGIRLGIPETQLRWSEGMLLRGPLELPVVW  417 (417)
T ss_dssp             HHHHHHHHCTTCEESSCGGGCCBCCCSSBCCBSCCEEEC
T ss_pred             HHHHHHHhCCCcEeCCCCccceeccCcccCCcceeEEeC
Confidence            999999999 5998764 344455555556666777763


No 56 
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=100.00  E-value=1.4e-55  Score=422.83  Aligned_cols=359  Identities=15%  Similarity=0.101  Sum_probs=265.1

Q ss_pred             chhHHHhHHHHhhcCceEEEeccccc--ccceEEecChhhHHHhHhcCCCCCCCCch--------hhh--------hhcc
Q 047842           44 YFHEFLAHDVLKKNRGTFEFTGPWFA--QMDLIITSDPMNVHYISSKNFSNYPKGPD--------FRM--------IMEP  105 (465)
Q Consensus        44 ~~~~~~~~~~~~kyg~v~~~~~~~~~--~~~~vvv~~p~~v~~i~~~~~~~~~~~~~--------~~~--------~~~~  105 (465)
                      +++.++. +++ +|||||++   ++|  +.++|+|+||+.+++++.++  .|++++.        +..        ....
T Consensus        21 ~p~~~~~-~l~-~~Gpv~~~---~~g~~~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (425)
T 2z3t_A           21 DPYPVYR-RYR-EAAPVHRT---ASGPGKPDTYYVFTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRALRTV   93 (425)
T ss_dssp             CCHHHHH-HHH-HHCSEEEE---CCCSSCCCEEEECSHHHHHHHHHCT--TEESSCCCC---------------CHHHHH
T ss_pred             ChHHHHH-HHH-hcCCeEec---cccCCCCCeEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccccccc
Confidence            3677888 875 59999999   877  77899999999999999874  5665532        111        1122


Q ss_pred             cCCcccccCChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHH-HHHHHHHHHHHHhC
Q 047842          106 LGDGVLNADGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVL-KRFAFDNICMLVLG  184 (465)
Q Consensus       106 ~~~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~i~~~~~fG  184 (465)
                      .+.+++..+|+.|+++|+++++.|+...++.+ .+.+.+.+ +.+++.+..   .+ ++|+...+ ..+++++++.+ ||
T Consensus        94 ~~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~ll~~l~~---~g-~~dl~~~~~~~~~~~vi~~~-~G  166 (425)
T 2z3t_A           94 VENWLVFLDPPHHTELRSLLTTEFSPSIVTGL-RPRIAELA-SALLDRLRA---QR-RPDLVEGFAAPLPILVISAL-LG  166 (425)
T ss_dssp             HTTCGGGCCHHHHHHHHHHHHGGGSHHHHHHH-HHHHHHHH-HHHHHHHTT---SS-SCBHHHHTTTHHHHHHHHHH-HT
T ss_pred             cccccccCCchHHHHHHHHHHHhhCHHHHHHH-HHHHHHHH-HHHHHHHHh---cC-CccHHHHHHHHHHHHHHHHH-hC
Confidence            34778889999999999999999999999888 78888887 666666653   23 79998754 78999999998 99


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHHHHHhhhchhHH-------HHHHHHhhhchHHH--------HHHh---hhhccCCc
Q 047842          185 IDPNYLSVEFPQTVYANAFNTMEQALLYRHIVPKIC-------WKLQKWLQIGEEKK--------LSRA---WKLSIDSS  246 (465)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-------~~~~~~~~~~~~~~--------~~~~---~~~~~dl~  246 (465)
                      .+.+.      ...+......+..........+...       ..+..++....+++        +...   ...-..++
T Consensus       167 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~~ls  240 (425)
T 2z3t_A          167 IPEED------HTWLRANAVALQEASTTRARDGRGYARAEAASQEFTRYFRREVDRRGGDDRDDLLTLLVRARDTGSPLS  240 (425)
T ss_dssp             CCGGG------HHHHHHHHHHHHTTCTTCCC---HHHHHHHHHHHHHHHHHHHHCC-------CHHHHHHHHHHTTCCCC
T ss_pred             CCHHH------HHHHHHHHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhhccCCCCC
Confidence            87642      1223333322221100000000000       01111111111100        0000   00112479


Q ss_pred             hHHHHHHHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhHHHHHhh
Q 047842          247 TSFLRDTAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYLHAALCE  326 (465)
Q Consensus       247 ~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E  326 (465)
                      ++++.++++.+++||+|||+++++|++++|++||++|+|+++|++                           |++|||+|
T Consensus       241 ~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------------------~l~a~i~E  293 (425)
T 2z3t_A          241 VDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTPE---------------------------STPAAVEE  293 (425)
T ss_dssp             HHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHCHHHHHHHHHCGG---------------------------GHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhChH---------------------------hHHHHHHH
Confidence            999999999999999999999999999999999999999999876                           79999999


Q ss_pred             hCCCCCCCcCcceeccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccccccCCC
Q 047842          327 TLRLYPPVPYNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKFTAFHAG  406 (465)
Q Consensus       327 ~lRl~p~~~~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G  406 (465)
                      +||++|+++...|.+. +|+.++||.|||||.|+++.+++||||++| +||++|+||||.           ..++|||+|
T Consensus       294 ~lRl~p~~~~~~R~~~-~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~l~FG~G  360 (425)
T 2z3t_A          294 LMRYDPPVQAVTRWAY-EDIRLGDHDIPRGSRVVALLGSANRDPARF-PDPDVLDVHRAA-----------ERQVGFGLG  360 (425)
T ss_dssp             HHHHSCSBCEEEEEES-SCEEETTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTSCS-----------SCCCTTCCS
T ss_pred             HHHhCCcccCcceEeC-CCeeECCEEECCCCEEEeChhhhCCCcccc-CCcccCCCCCCC-----------CCCCCCCCC
Confidence            9999999995455454 566679999999999999999999999999 999999999995           248999999


Q ss_pred             CCCCcChHHHHHHHHHHHHHHHhcc-EEEeecCCCccCcceEEeecCCCeeEEEEecC
Q 047842          407 PRNCLGKDKALIQMKMVASAVIGNY-HVKVAKGHPVLPRKSIILNMKYGLKVQLSKRS  463 (465)
Q Consensus       407 ~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  463 (465)
                      +|.|+|++||++|++++++.|+++| +++ .++.+..+..+.++++..+++|++++.+
T Consensus       361 ~r~C~G~~lA~~e~~~~la~ll~~f~~~~-~~~~~~~~~~~~~~~~~~~lpv~~~~~~  417 (425)
T 2z3t_A          361 IHYCLGATLARAEAEIGLRALLDGIPALG-RGAHEVEYADDMVFHGPTRLLLDLPDAA  417 (425)
T ss_dssp             TTCCTTHHHHHHHHHHHHHHHHHHCGGGG-SSCEEEEECSCSSBCCEEEEEECCC---
T ss_pred             CccCCCHHHHHHHHHHHHHHHHHhCCcCc-cCCCccccccccccCCcceeeEEecchh
Confidence            9999999999999999999999999 899 7543223344455666677888887653


No 57 
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=100.00  E-value=4.2e-55  Score=417.89  Aligned_cols=358  Identities=15%  Similarity=0.122  Sum_probs=263.0

Q ss_pred             chhHHHhHHHHhhcCceEEEecccc-cccceEEecChhhHHHhHhcCCCCCCCCchhhh------hhcc-----cCCc-c
Q 047842           44 YFHEFLAHDVLKKNRGTFEFTGPWF-AQMDLIITSDPMNVHYISSKNFSNYPKGPDFRM------IMEP-----LGDG-V  110 (465)
Q Consensus        44 ~~~~~~~~~~~~kyg~v~~~~~~~~-~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~~~------~~~~-----~~~~-l  110 (465)
                      +++.++. +++ +|||||++   ++ |+.++|+|+||+.+++++.++  .|++++....      ....     .+.+ +
T Consensus        23 ~p~~~~~-~l~-~~Gpv~~~---~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   95 (413)
T 2z36_A           23 APPAAYE-RLR-ERAPINKV---RLTSGGQAWWVSGHEEARAVLADG--RFSSDKRKDGFPLFTLDAATLQQLRSQPPLM   95 (413)
T ss_dssp             BCCHHHH-HHH-HHCSEEEE---EETTSCEEEEECSHHHHHHHHHCT--TEECCTTSTTCCCSSCCHHHHHHHTTSCCCG
T ss_pred             CchHHHH-HHH-HcCCeeEe---ecCCCceEEEEecHHHHHHHHcCC--CcccCccccCccccccccccccccccccccc
Confidence            4777888 886 78999999   76 788999999999999999873  4555432111      1122     2677 8


Q ss_pred             cccCChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHHH-HHHHHHHHHHHhCCCCCC
Q 047842          111 LNADGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVLK-RFAFDNICMLVLGIDPNY  189 (465)
Q Consensus       111 ~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~-~~~~~i~~~~~fG~~~~~  189 (465)
                      +..+|+.|+++|+++++.|+...++.+ .+.+++.+ +.+++.+.+  ..++++|+...+. .+++++++.+ ||.+.+.
T Consensus        96 ~~~~g~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~ll~~l~~--~~~~~~d~~~~~~~~~~~~vi~~~-~G~~~~~  170 (413)
T 2z36_A           96 LGMDGAEHSAARRPVIGEFTVKRLAAL-RPRIQDIV-DHFIDDMLA--TDQRPVDLVQALSLPVPSLVICEL-LGVPYTD  170 (413)
T ss_dssp             GGCCHHHHHHHHHHHHGGGSHHHHHHH-HHHHHHHH-HHHHHHHTT--CSCSSEEHHHHTTTHHHHHHHHHH-HTCCGGG
T ss_pred             cccCchHHHHHHHHHHHhhCHHHHHHH-HHHHHHHH-HHHHHHHHH--hcCCCccHHHHHhhhhHHHHHHHH-hCCCHHH
Confidence            889999999999999999999999888 78888887 666666653  2256799986654 6999999995 9986542


Q ss_pred             CCCCCccchHHHHHHHHHHHHHHhhhchhHHHHHHHHhhhchHHHH--------HH---hhhhccCCchHHHHHHHHHHh
Q 047842          190 LSVEFPQTVYANAFNTMEQALLYRHIVPKICWKLQKWLQIGEEKKL--------SR---AWKLSIDSSTSFLRDTAFSFL  258 (465)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~--------~~---~~~~~~dl~~~~i~~~~~~~~  258 (465)
                            ...+......+......... ......+..++....+++.        ..   ....-..++++++.+++..++
T Consensus       171 ------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~~ls~~ei~~~~~~l~  243 (413)
T 2z36_A          171 ------HDFFQSRTTMMVSRTSMEDR-RRAFAELRAYIDDLITRKESEPGDDLFSRQIARQRQEGTLDHAGLVSLAFLLL  243 (413)
T ss_dssp             ------HHHHHHHHHHTTCSSCHHHH-HHHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHSCCCHHHHHHHHHHHH
T ss_pred             ------HHHHHHHHHHHhcccCcHHH-HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhhcCCCCCCHHHHHHHHHHHH
Confidence                  11222222211100000000 0000111111111111110        00   001112579999999999999


Q ss_pred             hcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhHHHHHhhhCCCCCCCcCcc
Q 047842          259 GAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYLHAALCETLRLYPPVPYNH  338 (465)
Q Consensus       259 ~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~  338 (465)
                      +||+|||+++++|++++|++||++|+|+++|++                           |++|||+|+||++|+++...
T Consensus       244 ~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~---------------------------~l~a~i~E~lRl~p~~~~~~  296 (413)
T 2z36_A          244 TAGHETTANMISLGVVGLLSHPEQLTVVKANPG---------------------------RTPMAVEELLRYFTIADGVT  296 (413)
T ss_dssp             HHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGG---------------------------GHHHHHHHHHHHHCTTTTCE
T ss_pred             hcchHHHHHHHHHHHHHHHhCHHHHHHHHhChH---------------------------HHHHHHHHHHHhCCCcccce
Confidence            999999999999999999999999999999875                           78999999999999999544


Q ss_pred             eeccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccccccCCCCCCCcChHHHHH
Q 047842          339 KIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKFTAFHAGPRNCLGKDKALI  418 (465)
Q Consensus       339 r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~  418 (465)
                      +|.+.+|+.++||.|||||.|+++.+++||||++| +||++|+||||.           ..++|||+|+|.|||++||++
T Consensus       297 ~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~l~FG~G~r~C~G~~lA~~  364 (413)
T 2z36_A          297 SRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVF-KDPAVLDVERGA-----------RHHLAFGFGPHQCLGQNLARM  364 (413)
T ss_dssp             EEEECSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCCC-----------CCCCTTCCSTTSCTTHHHHHH
T ss_pred             eeeeCCCEEECCEEECCCCEEEEChHhhcCChhhC-CCccccCCCCCC-----------CCCCCCCCCCccCccHHHHHH
Confidence            44445567779999999999999999999999999 999999999983           248999999999999999999


Q ss_pred             HHHHHHHHHHhcc-EEEeecC-CCccCcceEEeecCCCeeEEE
Q 047842          419 QMKMVASAVIGNY-HVKVAKG-HPVLPRKSIILNMKYGLKVQL  459 (465)
Q Consensus       419 e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  459 (465)
                      |++++++.|+++| ++++.++ .++.+..+...+-...++|++
T Consensus       365 e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~g~~~lpv~~  407 (413)
T 2z36_A          365 ELQIVFDTLFRRIPSLRLAVPMEDVPFKGDSVIYGVHELPVTW  407 (413)
T ss_dssp             HHHHHHHHHHHHSTTCEESSCGGGSCBCTTSSSCCBSCCEEEC
T ss_pred             HHHHHHHHHHHhCCCccccCCcccceecccccccCcceeeEEe
Confidence            9999999999999 5898765 344444444444334566654


No 58 
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=100.00  E-value=1.3e-54  Score=416.25  Aligned_cols=357  Identities=13%  Similarity=0.121  Sum_probs=265.8

Q ss_pred             chhHHHhHHHHhhcC-ceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCchhh-hhh-cccCCcccccCChhHHH
Q 047842           44 YFHEFLAHDVLKKNR-GTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPDFR-MIM-EPLGDGVLNADGDLWKI  120 (465)
Q Consensus        44 ~~~~~~~~~~~~kyg-~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~~-~~~-~~~~~~l~~~~g~~w~~  120 (465)
                      +++.++. ++++++| |||++   ..++ +.++|+||+.+++++++. ..|++++... ... ...+.+++..+|+.|++
T Consensus        39 dp~~~~~-~lr~~~G~pv~~~---~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~dg~~h~~  112 (421)
T 3lxh_A           39 GFHEAWK-RVQQPDTPPLVWT---PFTG-GHWIATRGTLIDEIYRSP-ERFSSRVIWVPREAGEAYDMVPTKLDPPEHTP  112 (421)
T ss_dssp             CHHHHHH-HHCCTTCCSEEEE---SSTT-SEEEECSHHHHHHHHTCT-TTEETTCCSSSHHHHHHCCCTTTTCCTTTHHH
T ss_pred             ChhHHHH-HHHhcCCCCeEec---cCCC-CeEEEcCHHHHHHHHcCh-hhccCCcccCCcccccccccCCccCCcHHHHH
Confidence            5888888 8877665 89988   6655 599999999999999654 5666654221 111 22346788899999999


Q ss_pred             HHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHH-HHHHHHHHHHHHhCCCCCCCCCCCccchH
Q 047842          121 QRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVL-KRFAFDNICMLVLGIDPNYLSVEFPQTVY  199 (465)
Q Consensus       121 ~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~i~~~~~fG~~~~~~~~~~~~~~~  199 (465)
                      +|+++++.|+...++.+ .+.+.+.+ +.+++.+..    ++.+|+...+ ..++.++++.+ ||.+.+.      ...+
T Consensus       113 ~R~~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~----~~~~d~~~~~~~~~~~~v~~~~-~G~~~~~------~~~~  179 (421)
T 3lxh_A          113 YRKAIDKGLNLAEIRKL-EDQIRTIA-VEIIEGFAD----RGHCEFGSEFSTVFPVRVFLAL-AGLPVED------ATKL  179 (421)
T ss_dssp             HHHHHHHHHSHHHHHTT-HHHHHHHH-HHHHHTTTT----TSEEEHHHHTTTTHHHHHHHHH-HTCCGGG------HHHH
T ss_pred             HHHHHhhhcCHHHHHHH-HHHHHHHH-HHHHHHHhh----cCCeehHHHHHHHHHHHHHHHH-cCCCHHH------HHHH
Confidence            99999999999999887 78888886 666666542    3468876555 56888888775 8976542      2233


Q ss_pred             HHHHHHHHHHHHHhhhchh--------HHHHHHHHhhhchHHHHH--------Hhhh---hccCCchHHHHHHHHHHhhc
Q 047842          200 ANAFNTMEQALLYRHIVPK--------ICWKLQKWLQIGEEKKLS--------RAWK---LSIDSSTSFLRDTAFSFLGA  260 (465)
Q Consensus       200 ~~~~~~~~~~~~~~~~~p~--------~~~~~~~~~~~~~~~~~~--------~~~~---~~~dl~~~~i~~~~~~~~~a  260 (465)
                      .+....+....   ...|.        ....+..++....+++.+        ....   .-..++++++..+++.+++|
T Consensus       180 ~~~~~~~~~~~---~~~p~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~~l~~~ei~~~~~~l~~A  256 (421)
T 3lxh_A          180 GLLANEMTRPS---GNTPEEQGRSLEAANKGFFEYVAPIIAARRGGSGTDLITRILNVEIDGKPMPDDRALGLVSLLLLG  256 (421)
T ss_dssp             HHHHHHHHSCC---CSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHTSCBTTBCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhccc---cCCCchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhhhccCCCCCHHHHHHHHHHHHHH
Confidence            33333322110   01111        011111122111111110        0000   01137999999999999999


Q ss_pred             chhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhHHHHHhhhCCCCCCCcCccee
Q 047842          261 GNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYLHAALCETLRLYPPVPYNHKI  340 (465)
Q Consensus       261 g~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r~  340 (465)
                      |+|||+.+++|++++|++||++|+|+++|++                           |++|||+|+||++|++ ...|.
T Consensus       257 G~eTta~~l~~~l~~L~~~P~~~~~l~~E~~---------------------------~l~a~i~E~lRl~p~~-~~~R~  308 (421)
T 3lxh_A          257 GLDTVVNFLGFMMIYLSRHPETVAEMRREPL---------------------------KLQRGVEELFRRFAVV-SDARY  308 (421)
T ss_dssp             HHHHHHHHHHHHHHHHTTCHHHHHHHHHCHH---------------------------HHHHHHHHHHHHCCCB-EEEEE
T ss_pred             hHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH---------------------------HHHHHHHHHHHhcCcc-CCcee
Confidence            9999999999999999999999999999998                           7899999999999999 65555


Q ss_pred             ccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccccccCCCCCCCcChHHHHHHH
Q 047842          341 AGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKFTAFHAGPRNCLGKDKALIQM  420 (465)
Q Consensus       341 ~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~  420 (465)
                      +.+ |+.++||.|||||.|+++.+++||||++| +||++|+||||           +..++|||+|+|.|+|++||++|+
T Consensus       309 ~~~-d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~-~dP~~F~PeR~-----------~~~~l~FG~G~r~C~G~~lA~~e~  375 (421)
T 3lxh_A          309 VVS-DMEFHGTMLKEGDLILLPTALHGLDDRHH-DDPMTVDLSRR-----------DVTHSTFAQGPHRCAGMHLARLEV  375 (421)
T ss_dssp             ECS-CEEETTEEECTTCEEEEETHHHHTCTTTS-SSTTSCCTTCS-----------CCCCCTTCCGGGSCTTHHHHHHHH
T ss_pred             eCC-CeeECCEEECCCCEEEEchhhhCCChhhC-CCcCeeCCCCC-----------CCCCCCCCCcCccCcCHHHHHHHH
Confidence            554 66669999999999999999999999999 99999999995           345999999999999999999999


Q ss_pred             HHHHHHHHhcc-EEEeecCCCccCcceEEeecCCCeeEEEEecCC
Q 047842          421 KMVASAVIGNY-HVKVAKGHPVLPRKSIILNMKYGLKVQLSKRSL  464 (465)
Q Consensus       421 ~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  464 (465)
                      +++++.|+++| +|++.++.+..+....+..+ ..++|++++|+.
T Consensus       376 ~~~l~~ll~~fp~~~l~~~~~~~~~~~~~~~~-~~lpv~~~p~~~  419 (421)
T 3lxh_A          376 TVMLQEWLARIPEFRLKDRAVPIYHSGIVAAV-ENIPLEWEPQRV  419 (421)
T ss_dssp             HHHHHHHHHHCCCCEECTTCCCEEECSSBCEE-ECCEEECCCC--
T ss_pred             HHHHHHHHHhCCCcEECCCCCceeccccccCc-eeeeEEEecccc
Confidence            99999999999 99998766554444444444 459999998853


No 59 
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=100.00  E-value=6.9e-55  Score=417.77  Aligned_cols=357  Identities=14%  Similarity=0.107  Sum_probs=268.2

Q ss_pred             chhHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCch-----hhhh--h-cc--c-CCcccc
Q 047842           44 YFHEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPD-----FRMI--M-EP--L-GDGVLN  112 (465)
Q Consensus        44 ~~~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~-----~~~~--~-~~--~-~~~l~~  112 (465)
                      +++.++. ++ ++||+||+ .    ++.++|+|++|+.+++++.++ . |++++.     +...  . ..  . +.+++.
T Consensus        27 ~p~~~~~-~l-~~~Gpv~~-~----~~~~~vvv~~~~~v~~vl~~~-~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   97 (419)
T 1q5d_A           27 DPFPAIE-RL-REATPIFY-W----DEGRSWVLTRYHDVSAVFRDE-R-FAVSREEWESSAEYSSAIPELSDMKKYGLFG   97 (419)
T ss_dssp             CCHHHHH-HH-HHHCSEEE-E----TTTTEEEECSHHHHHHHHTCT-T-EECCGGGSTTHHHHHHSSGGGHHHHHHSTTT
T ss_pred             ChHHHHH-HH-HhhCCccc-c----CCCCEEEEecHHHHHHHHcCC-C-ccccccccccccccccccchhhhhccccccc
Confidence            5788888 88 78999886 2    467899999999999999876 4 777651     2211  1 11  1 566888


Q ss_pred             cCChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHH-HHHHHHHHHHHHHhCCCCCCCC
Q 047842          113 ADGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDV-LKRFAFDNICMLVLGIDPNYLS  191 (465)
Q Consensus       113 ~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~-~~~~~~~i~~~~~fG~~~~~~~  191 (465)
                      .+|+.|+++|+++++.|+...++.+ .+.+.+.+ +.+++.+..   . +++|+... ...+++++++.+ ||.+.+.  
T Consensus        98 ~~g~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~ll~~l~~---~-~~~d~~~~~~~~~~~~vi~~~-fG~~~~~--  168 (419)
T 1q5d_A           98 LPPEDHARVRKLVNPSFTSRAIDLL-RAEIQRTV-DQLLDARSG---Q-EEFDVVRDYAEGIPMRAISAL-LKVPAEC--  168 (419)
T ss_dssp             SCHHHHHHHHHHHGGGGSHHHHGGG-HHHHHHHH-HHHHHHHTT---S-SCEETTTTTGGGSHHHHHHHH-TTCCGGG--
T ss_pred             CCchHHHHHHHHHHHhcCHHHHHHH-HHHHHHHH-HHHHHHHHh---c-CCCCHHHHHHHHHHHHHHHHH-hCCCHHH--
Confidence            9999999999999999999999887 78888887 666666643   2 37898764 489999999998 9987642  


Q ss_pred             CCCccchHHHHHHHHHHHHHHhhhch---hHH-------HHHHHHhhhchHHHHHH---------hhh---hccCCchHH
Q 047842          192 VEFPQTVYANAFNTMEQALLYRHIVP---KIC-------WKLQKWLQIGEEKKLSR---------AWK---LSIDSSTSF  249 (465)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~p---~~~-------~~~~~~~~~~~~~~~~~---------~~~---~~~dl~~~~  249 (465)
                          ...+......+..... ....|   ...       ..+..++....+++.+.         ...   .-..+++++
T Consensus       169 ----~~~~~~~~~~~~~~~~-~~~~P~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~dll~~ll~~~~~~~~l~~~e  243 (419)
T 1q5d_A          169 ----DEKFRRFGSATARALG-VGLVPRVDEETKTLVASVTEGLALLHGVLDERRRNPLENDVLTMLLQAEADGSRLSTKE  243 (419)
T ss_dssp             ----HHHHHHHHHHHHHHTT-TTTSSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHSSTTCCHHH
T ss_pred             ----HHHHHHHHHHHHHhcc-cccccCChHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHhhhccCCCCCHHH
Confidence                1234443333332211 11001   000       11112222111111110         000   011479999


Q ss_pred             HHHHHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhHHHHHhhhCC
Q 047842          250 LRDTAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYLHAALCETLR  329 (465)
Q Consensus       250 i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lR  329 (465)
                      +.+++..+++||+|||+++++|++++|++||++|+|+++|+.                           |++|||+|+||
T Consensus       244 i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~---------------------------~l~a~i~E~lR  296 (419)
T 1q5d_A          244 LVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEPG---------------------------LMRNALDEVLR  296 (419)
T ss_dssp             HHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCGG---------------------------GHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH---------------------------HHHHHHHHHHH
Confidence            999999999999999999999999999999999999999865                           79999999999


Q ss_pred             CCCCCcCcceeccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccccccCCCCCC
Q 047842          330 LYPPVPYNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKFTAFHAGPRN  409 (465)
Q Consensus       330 l~p~~~~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~  409 (465)
                      ++|+++...+|.+.+|+.++||.|||||.|+++.+++||||++| +||++|+||||  +         ..++|||+|+|.
T Consensus       297 l~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~--~---------~~~l~FG~G~r~  364 (419)
T 1q5d_A          297 FDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVF-SRPDVFDVRRD--T---------SASLAYGRGPHV  364 (419)
T ss_dssp             HSCSBSSEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTSC--C---------TTCCTTCCGGGC
T ss_pred             hCCccccccceeeCCCeEECCEEECCCCEEEecHHHhcCChhhC-CChhhcCCCCC--C---------CCCCCCCCCCCc
Confidence            99999954444445566779999999999999999999999999 99999999994  1         348999999999


Q ss_pred             CcChHHHHHHHHHHHHHHHhcc-EEEeecCCCccCcceEEeecCCCeeEEEEecCC
Q 047842          410 CLGKDKALIQMKMVASAVIGNY-HVKVAKGHPVLPRKSIILNMKYGLKVQLSKRSL  464 (465)
Q Consensus       410 C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  464 (465)
                      |+|++||++|++++++.|+++| ++++.++.  .+..+.+.++..+++|++++|+.
T Consensus       365 C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~l~v~~~~r~~  418 (419)
T 1q5d_A          365 CPGVSLARLEAEIAVGTIFRRFPEMKLKETP--VFGYHPAFRNIESLNVILKPSKA  418 (419)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHCTTCEECSCC--EECCCSSBCCEEECEEESSCC--
T ss_pred             CccHHHHHHHHHHHHHHHHHhCCCeEECCCc--ccccccccCCCceeEEEEecCCC
Confidence            9999999999999999999999 79997653  23334556677789999999863


No 60 
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=100.00  E-value=1.3e-54  Score=413.66  Aligned_cols=357  Identities=14%  Similarity=0.070  Sum_probs=263.4

Q ss_pred             cchhHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCchhhhh--hcccCCcccccCChhHHH
Q 047842           43 WYFHEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPDFRMI--MEPLGDGVLNADGDLWKI  120 (465)
Q Consensus        43 ~~~~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~g~~w~~  120 (465)
                      .+++.++. +++++ |||+++   ..+ .+.++|+||+.++++++++ +.|++++.....  ....+.+++..+|+.|++
T Consensus        24 ~~p~~~~~-~l~~~-Gpv~~~---~~~-~~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~g~~h~~   96 (396)
T 3oft_A           24 QDYFAAWK-TLLDG-PGLVWS---TAN-GGHWIAARGDVVRELWGDA-ERLSSQCLAVTPGLGKVMQFIPLQQDGAEHKA   96 (396)
T ss_dssp             TCHHHHHH-GGGGS-CSEEEE---CST-TSEEEECSHHHHHHHHHCT-TTEESTTCCSSTTHHHHHCCTTTTCCHHHHHH
T ss_pred             cChHHHHH-HHHhc-CCeeee---cCC-CCEEEEcCHHHHHHHHcCc-ccccCCcccCCCccccccccCccccCCcHHHH
Confidence            35888999 99988 999998   666 3589999999999999765 566665422111  122345688899999999


Q ss_pred             HHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHH-HHHHHHHHHHHHhCCCCCCCCCCCccchH
Q 047842          121 QRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVL-KRFAFDNICMLVLGIDPNYLSVEFPQTVY  199 (465)
Q Consensus       121 ~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~i~~~~~fG~~~~~~~~~~~~~~~  199 (465)
                      +|+++++.|+...++.+ .+.+.+.+ +.+++.+..    ++.+|+...+ ..++.++++. +||.+.+.      ...+
T Consensus        97 ~R~~~~~~f~~~~l~~~-~~~i~~~~-~~l~~~l~~----~~~~d~~~~~~~~~~~~v~~~-~~G~~~~~------~~~~  163 (396)
T 3oft_A           97 FRTPVMKGLASRFVVAL-EPKVQAVA-RKLMESLRP----RGSCDFVSDFAEILPLNIFLT-LIDVPLED------RPRL  163 (396)
T ss_dssp             HHHHHHHHTCHHHHHHH-HHHHHHHH-HHHHHHHGG----GSEEEHHHHTTTTHHHHHHHH-HTTCCGGG------HHHH
T ss_pred             HHHHhhhhhCHHHHHHH-HHHHHHHH-HHHHHHhhh----cCCccHHHHHHHHHHHHHHHH-HcCCCHHH------HHHH
Confidence            99999999999999988 78888887 666666643    2358876665 5677777777 58875432      2223


Q ss_pred             HHHHHHHHHHHHHhhhchhHHHHHHHHhhhchHHHHHH--------hhh---hccCCchHHHHHHHHHHhhcchhhHHHH
Q 047842          200 ANAFNTMEQALLYRHIVPKICWKLQKWLQIGEEKKLSR--------AWK---LSIDSSTSFLRDTAFSFLGAGNDTISSG  268 (465)
Q Consensus       200 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~--------~~~---~~~dl~~~~i~~~~~~~~~ag~~tt~~~  268 (465)
                      ......+....... ........+..++....+++.+.        ...   .-..++++++..+++.+++||+|||+++
T Consensus       164 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~~l~~~el~~~~~~l~~AG~dTta~~  242 (396)
T 3oft_A          164 RQLGVQLTRPDGSM-TVEQLKQAADDYLWPFIEKRMAQPGDDLFSRILSEPVGGRPWTVDEARRMCRNLLFGGLDTVAAM  242 (396)
T ss_dssp             HHHHHHHHSCCSSC-CHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHTSCBTTBCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCHH-HHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHhhHHHHHH
Confidence            33332222100000 00011112222222222222111        000   0114799999999999999999999999


Q ss_pred             HHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhHHHHHhhhCCCCCCCcCcceeccCccccC
Q 047842          269 LVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYLHAALCETLRLYPPVPYNHKIAGQADILP  348 (465)
Q Consensus       269 l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~  348 (465)
                      ++|++++|++||++|+|+++|++                           |++|||+|+||++|++ ...|.+.+ |+.+
T Consensus       243 l~~~l~~L~~~P~~~~~l~~E~~---------------------------~l~a~i~E~lRl~p~~-~~~R~~~~-d~~~  293 (396)
T 3oft_A          243 IGMVALHLARHPEDQRLLRERPD---------------------------LIPAAADELMRRYPTV-AVSRNAVA-DVDA  293 (396)
T ss_dssp             HHHHHHHHHHCHHHHHHHHHCGG---------------------------GHHHHHHHHHHHCCCB-EEEEEESS-CEEE
T ss_pred             HHHHHHHHHhCHHHHHHHHhCHH---------------------------hHHHHHHHHHHhcCcc-cCceecCC-CEEE
Confidence            99999999999999999999987                           7899999999999999 65555554 6666


Q ss_pred             CCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccccccCCCCCCCcChHHHHHHHHHHHHHHH
Q 047842          349 SGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKFTAFHAGPRNCLGKDKALIQMKMVASAVI  428 (465)
Q Consensus       349 ~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll  428 (465)
                      +||.|||||.|+++.+++||||++| +||++|+|+||+.         +..++|||+|+|.|+|++||++|++++++.|+
T Consensus       294 ~g~~Ip~G~~V~~~~~~~~rdp~~~-~dp~~F~PeR~~~---------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll  363 (396)
T 3oft_A          294 DGVTIRKGDLVYLPSVLHNLDPASF-EAPEEVRFDRGLA---------PIRHTTMGVGAHRCVGAGLARMEVIVFLREWL  363 (396)
T ss_dssp             TTEEECTTCEEEEETHHHHTCTTTS-SSTTSCCSCCCCC---------GGGSSTTCCGGGCCTTHHHHHHHHHHHHHHHH
T ss_pred             CCEEECCCCEEEeChHHhCCCcccC-CCcCccCCCCCCC---------CCCcccCCCCCccCcCHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999 9999999999963         34699999999999999999999999999999


Q ss_pred             hcc-EEEeecCCCccCcceEEeecCCCeeEEEE
Q 047842          429 GNY-HVKVAKGHPVLPRKSIILNMKYGLKVQLS  460 (465)
Q Consensus       429 ~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  460 (465)
                      ++| ++++.++.+..+....+..+ ..++|+++
T Consensus       364 ~~~~~~~l~~~~~~~~~~~~~~~~-~~lpv~~~  395 (396)
T 3oft_A          364 GGMPEFALAPDKAVTMKGGNVGAC-TALPLVWR  395 (396)
T ss_dssp             HHSCCEEECSSSCCEEECSSBCEE-EECEEEEC
T ss_pred             HhCCCceECCCCCceeccccccCc-ccceEEeC
Confidence            999 99998766554433333233 34667664


No 61 
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=100.00  E-value=4.9e-55  Score=416.15  Aligned_cols=355  Identities=15%  Similarity=0.142  Sum_probs=253.1

Q ss_pred             hHHHhHHHHhhcCceEEEeccccc-cc---ceEEecChhhHHHhH-hcCCCCCCCCch---------hhhhh-cccCCcc
Q 047842           46 HEFLAHDVLKKNRGTFEFTGPWFA-QM---DLIITSDPMNVHYIS-SKNFSNYPKGPD---------FRMIM-EPLGDGV  110 (465)
Q Consensus        46 ~~~~~~~~~~kyg~v~~~~~~~~~-~~---~~vvv~~p~~v~~i~-~~~~~~~~~~~~---------~~~~~-~~~~~~l  110 (465)
                      +..+. +++++ ||||++   +++ +.   ++|+|+||+.+++++ ++  ..|++++.         +.... ...+.++
T Consensus        16 ~~~~~-~l~~~-Gpv~~~---~~~~g~~~~~~vvv~~~~~v~~vl~~~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~~l   88 (398)
T 1lfk_A           16 LDPAD-ELLAA-GALTRV---TIGSGADAETHWMATAHAVVRQVMGDH--QQFSTRRRWDPRDEIGGKGIFRPRELVGNL   88 (398)
T ss_dssp             TEECH-HHHTS-CSEEEE---C------CCCEEEECSHHHHHHHHHCT--TTEEECTTCCC-------------CCTTCG
T ss_pred             CChhH-HHHhc-CCcccc---ccCCCCcccceEEEecHHHHHHHHhhC--cccccccccccccccCCcccccccccccCc
Confidence            33455 66666 999998   654 45   899999999999999 54  33544432         11111 1235678


Q ss_pred             cccCChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHHHH-HHHHHHHHHHhCCCCCC
Q 047842          111 LNADGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVLKR-FAFDNICMLVLGIDPNY  189 (465)
Q Consensus       111 ~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~-~~~~i~~~~~fG~~~~~  189 (465)
                      +..+|+.|+++|+++++.|+...++.+ .+.+.+.+ +.+++.+..   .++++|+.+.+.. ++.++++. +||.+.+.
T Consensus        89 ~~~~g~~~~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~  162 (398)
T 1lfk_A           89 MDYDPPEHTRLRRKLTPGFTLRKMQRM-APYIEQIV-NDRLDEMER---AGSPADLIAFVADKVPGAVLCE-LVGVPRDD  162 (398)
T ss_dssp             GGCCTTHHHHHHHHHGGGGCHHHHHHH-HHHHHHHH-HHHHHHHHH---HCSSEEHHHHTTTTHHHHHHHH-HHTCCGGG
T ss_pred             cccCCHHHHHHHHHHHhhhCHHHHHHH-HHHHHHHH-HHHHHHHHh---cCCCccHHHHHHHHHHHHHHHH-HcCCCHHH
Confidence            889999999999999999999999888 78888887 666666642   3567999999886 89999998 59987642


Q ss_pred             CCCCCccchHHHHHHHHHHHHHHhhhchhHHHHHHHHhhhchHHHHHH--------hhhh-ccCCchHHHHHHHHHHhhc
Q 047842          190 LSVEFPQTVYANAFNTMEQALLYRHIVPKICWKLQKWLQIGEEKKLSR--------AWKL-SIDSSTSFLRDTAFSFLGA  260 (465)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~--------~~~~-~~dl~~~~i~~~~~~~~~a  260 (465)
                            ...+......+................+..++....+++.+.        .... -..++++++.++++.+++|
T Consensus       163 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~l~~~el~~~~~~l~~A  236 (398)
T 1lfk_A          163 ------RDMFMKLCHGHLDASLSQKRRAALGDKFSRYLLAMIARERKEPGEGMIGAVVAEYGDDATDEELRGFCVQVMLA  236 (398)
T ss_dssp             ------HHHHHHHHHHTTCTTSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHGGGSCHHHHHHHHHHHHHH
T ss_pred             ------HHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence                  122333222211100000000000111111221111111110        0000 1247999999999999999


Q ss_pred             chhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhHHHHHhhhCCCCCCCcCccee
Q 047842          261 GNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYLHAALCETLRLYPPVPYNHKI  340 (465)
Q Consensus       261 g~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r~  340 (465)
                      |+|||+++++|++++|++||++|+|+++|++                           |++|||+|+||++|+++...+|
T Consensus       237 G~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------------------~l~a~i~E~lRl~p~~~~~~~R  289 (398)
T 1lfk_A          237 GDDNISGMIGLGVLAMLRHPEQIDAFRGDEQ---------------------------SAQRAVDELIRYLTVPYSPTPR  289 (398)
T ss_dssp             TSHHHHHHHHHHHHHHHHSGGGGGGGSSCHH---------------------------HHHHHHHHHHHHHCCBSCCSCE
T ss_pred             hccHHHHHHHHHHHHHHHCHHHHHHHHhCHH---------------------------HHHHHHHHHHHhCcccccccce
Confidence            9999999999999999999999999999987                           7899999999999999954444


Q ss_pred             ccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccccccCCCCCCCcChHHHHHHH
Q 047842          341 AGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKFTAFHAGPRNCLGKDKALIQM  420 (465)
Q Consensus       341 ~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~  420 (465)
                      .+.+|+.++||.|||||.|+++.+++||||++| +||++|+||||.           ..++|||+|+|.|+|++||++|+
T Consensus       290 ~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~l~FG~G~r~C~G~~lA~~e~  357 (398)
T 1lfk_A          290 IAREDLTLAGQEIKKGDSVICSLPAANRDPALA-PDVDRLDVTREP-----------IPHVAFGHGVHHCLGAALARLEL  357 (398)
T ss_dssp             EESSCEEETTEEECTTCEEEECHHHHTTCTTTC-TTTTSCCTTSCC-----------CCCCTTCCSTTSCTTHHHHHHHH
T ss_pred             ecCCCeeECCEEECCCCEEEeChHHhCCCchhc-CCccccCCCCCC-----------CCCCCCCCCCCcCCCHHHHHHHH
Confidence            444566679999999999999999999999999 999999999983           24899999999999999999999


Q ss_pred             HHHHHHHHhcc-EEEeecC-CCccCcceEEeecCCCeeEE
Q 047842          421 KMVASAVIGNY-HVKVAKG-HPVLPRKSIILNMKYGLKVQ  458 (465)
Q Consensus       421 ~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~  458 (465)
                      +++++.|+++| ++++.++ .++.+..+...+....++|+
T Consensus       358 ~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~  397 (398)
T 1lfk_A          358 RTVFTELWRRFPALRLADPAQDTEFRLTTPAYGLTELMVA  397 (398)
T ss_dssp             HHHHHHHHHHCTTCEESSTTCCCEEECSSSBCEEEECEEE
T ss_pred             HHHHHHHHHhCCCCEeCCCCCccccccCcCcCCcccceee
Confidence            99999999999 8999742 33333333333333345443


No 62 
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=100.00  E-value=1.9e-54  Score=413.12  Aligned_cols=357  Identities=13%  Similarity=0.122  Sum_probs=264.8

Q ss_pred             chhHHHhHHHHhhcCceEEEecccccc--cceEEecChhhHHHhHhcCCCCCCCCchhhhhh---cc--c-CCcccccCC
Q 047842           44 YFHEFLAHDVLKKNRGTFEFTGPWFAQ--MDLIITSDPMNVHYISSKNFSNYPKGPDFRMIM---EP--L-GDGVLNADG  115 (465)
Q Consensus        44 ~~~~~~~~~~~~kyg~v~~~~~~~~~~--~~~vvv~~p~~v~~i~~~~~~~~~~~~~~~~~~---~~--~-~~~l~~~~g  115 (465)
                      +++.++. ++++ ||||+++   ...+  .+.++|++++.++++++++ ..|++.+......   ..  . +.+++..+|
T Consensus        38 dp~~~~~-~lr~-~gpV~~~---~~~g~~~~~~vv~~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~l~~~dg  111 (415)
T 3mgx_A           38 ERHARWR-ELAA-EDAMVWS---DPGSSPSGFWSVFSHRACAAVLAPS-APLTSEYGMMIGFDRDHPDNSGGRMMVVSEH  111 (415)
T ss_dssp             THHHHHH-HHHH-HTCCEEE---CSSSSSSCEEEECSHHHHHHHSCTT-SSEECTTCSSTTCCSSSCCTTTTTSGGGCCH
T ss_pred             ChhHHHH-HHHh-cCCEeec---cCCCCcCCEEEEecHHHHHHHHhCh-hhhcCCccccccccccccccccCCCccccCc
Confidence            5788888 7875 9999988   4234  7899999999999999764 4565543221111   11  2 556888999


Q ss_pred             hhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHH-HHHHHHHHHHHHhCCCCCCCCCCC
Q 047842          116 DLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVL-KRFAFDNICMLVLGIDPNYLSVEF  194 (465)
Q Consensus       116 ~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~i~~~~~fG~~~~~~~~~~  194 (465)
                      +.|+++|+++++.|+...++.+ .+.+++.+ +.+++.+..    ++.+|+...+ ..+++++++++ ||.+.+.     
T Consensus       112 ~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~ll~~l~~----~~~~dl~~~~~~~~~~~vi~~l-~G~~~~~-----  179 (415)
T 3mgx_A          112 EQHRKLRKLVGPLLSRAAARKL-AERVRIEV-GDVLGRVLD----GEVCDAATAIGPRIPAAVVCEI-LGVPAED-----  179 (415)
T ss_dssp             HHHHHHHHHHGGGSSHHHHHHS-HHHHHHHH-HHHTTTSSS----SSCEESTTTTTTHHHHHHHHHH-HTCCGGG-----
T ss_pred             HHHHHHHHHhHhhhCHHHHHHH-HHHHHHHH-HHHHHHHHh----cCCcchHHHHHHHHHHHHHHHH-cCCCHHH-----
Confidence            9999999999999999999888 78888887 666665543    2368998877 67999999985 8975431     


Q ss_pred             ccchHHHHHHHHHHHHHHhhhch----hHHHHHHHHhhhchHHHHHHh----hhhc---cCCchHHHHHHHHHHhhcchh
Q 047842          195 PQTVYANAFNTMEQALLYRHIVP----KICWKLQKWLQIGEEKKLSRA----WKLS---IDSSTSFLRDTAFSFLGAGND  263 (465)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~p----~~~~~~~~~~~~~~~~~~~~~----~~~~---~dl~~~~i~~~~~~~~~ag~~  263 (465)
                       ...+.+....+...... ...+    .....+..++....+++.+..    ...+   ..++++++..+++.+++||+|
T Consensus       180 -~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~i~~rr~~~~~dll~~ll~~~~ls~~el~~~~~~ll~AG~e  257 (415)
T 3mgx_A          180 -EDMLIDLTNHAFGGEDE-LFDGMTPRQAHTEILVYFDELITARRKEPGDDLVSTLVTDDDLTIDDVLLNCDNVLIGGNE  257 (415)
T ss_dssp             -HHHHHHHHHHHTSCCC-----CCCHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCTTSCHHHHHHHHHHHHHHHHT
T ss_pred             -HHHHHHHHHHHHcccCc-ccchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHhhhH
Confidence             22333333332211000 0001    111112222222222211110    0000   057999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhHHHHHhhhCCCCCCCcCcceeccC
Q 047842          264 TISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYLHAALCETLRLYPPVPYNHKIAGQ  343 (465)
Q Consensus       264 tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r~~~~  343 (465)
                      ||+++++|++++|++||++|+|+++|+.                           |++|||+|+||++|+++...|.+++
T Consensus       258 TTa~~l~~~l~~L~~~P~~~~~l~~E~~---------------------------~l~a~i~E~LRl~pp~~~~~R~~~~  310 (415)
T 3mgx_A          258 TTRHAITGAVHALATVPGLLTALRDGSA---------------------------DVDTVVEEVLRWTSPAMHVLRVTTA  310 (415)
T ss_dssp             THHHHHHHHHHHHHHSTTHHHHHHHTSS---------------------------CHHHHHHHHHHHHCCBCEEEEEESS
T ss_pred             HHHHHHHHHHHHHHHCHHHHHHHHhChH---------------------------hHHHHHHHHHHhcCcccccceecCC
Confidence            9999999999999999999999999864                           8999999999999999966555544


Q ss_pred             ccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccccccCCCCCCCcChHHHHHHHHHH
Q 047842          344 ADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKFTAFHAGPRNCLGKDKALIQMKMV  423 (465)
Q Consensus       344 ~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~  423 (465)
                       |+.++||.||||+.|+++.+++||||++| +||++|+|+||.           ..++|||+|+|.|+|++||++|++++
T Consensus       311 -d~~l~G~~Ip~G~~V~~~~~a~~rDp~~~-~dP~~F~P~R~~-----------~~~l~FG~G~r~C~G~~lA~~e~~~~  377 (415)
T 3mgx_A          311 -DVTINGRDLPSGTPVVAWLPAANRDPAEF-DDPDTFLPGRKP-----------NRHITFGHGMHHCLGSALARIELSVV  377 (415)
T ss_dssp             -CEEETTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTCCS-----------CCCCTTCCGGGCCTTHHHHHHHHHHH
T ss_pred             -CeeECCEEECCCCEEEechHHhCCChhhc-CCccccCCCCCC-----------CCCCCCCCCCccCcCHHHHHHHHHHH
Confidence             56669999999999999999999999999 999999999983           24899999999999999999999999


Q ss_pred             HHHHHhcc-EEEeecCCCccCcceEEeecCCCeeEEEEec
Q 047842          424 ASAVIGNY-HVKVAKGHPVLPRKSIILNMKYGLKVQLSKR  462 (465)
Q Consensus       424 l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  462 (465)
                      ++.|+++| ++++.++..+  ..+...+....++|++++|
T Consensus       378 l~~ll~~f~~~~l~~~~~~--~~~~~~~~~~~lpv~~~~R  415 (415)
T 3mgx_A          378 LRVLAERVSRVDLEREPAW--LRAIVVQGYRELPVRFTGR  415 (415)
T ss_dssp             HHHHHHHEEEEEECSCCEE--CSCSSBCCEEECEEEEEEC
T ss_pred             HHHHHHhCCCCccCCCccc--ccCCcccCceeeeEEEecC
Confidence            99999999 8999754322  2233334445689999987


No 63 
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=100.00  E-value=3.7e-54  Score=413.97  Aligned_cols=358  Identities=15%  Similarity=0.126  Sum_probs=266.2

Q ss_pred             chhHHHhHHHHhhcCceEEEeccccc-------ccceEEecChhhHHHhHhcCCCCCCCCch--hhhhh-c--ccCCccc
Q 047842           44 YFHEFLAHDVLKKNRGTFEFTGPWFA-------QMDLIITSDPMNVHYISSKNFSNYPKGPD--FRMIM-E--PLGDGVL  111 (465)
Q Consensus        44 ~~~~~~~~~~~~kyg~v~~~~~~~~~-------~~~~vvv~~p~~v~~i~~~~~~~~~~~~~--~~~~~-~--~~~~~l~  111 (465)
                      +++.++. +++ +|||||++   +++       +.++|+|+||+.+++++.++ ..|++++.  +.... .  ..+.+++
T Consensus        45 ~p~~~~~-~l~-~~Gpv~~~---~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~l~  118 (435)
T 2wm5_A           45 VRDGAFA-TLR-REAPISFW---PTIELPGFVAGNGHWALTKYDDVFYASRHP-DIFSSYPNITINDQTPELAEYFGSMI  118 (435)
T ss_dssp             HHHHHHH-HHH-HHCSEEEE---CCCCC---CCCCCEEEECSHHHHHHHHHCT-TTEECSSCCSSSCCCHHHHHHHHGGG
T ss_pred             ChhHHHH-HHH-hcCCeEec---ccccccccCCCCCeEEEcCHHHHHHHHcCc-ccccCccccccCccccchhhhccccc
Confidence            4777888 885 79999998   765       56899999999999999975 55766542  11111 1  1256788


Q ss_pred             ccCChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHH-HHHHHHHHHHHHhCCCCCCC
Q 047842          112 NADGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVL-KRFAFDNICMLVLGIDPNYL  190 (465)
Q Consensus       112 ~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~i~~~~~fG~~~~~~  190 (465)
                      ..+|+.|+++|+++.+.|+...++.+ .+.+.+.+ +.+++.+... .+++.+|+...+ ..+++++++++ ||.+.+. 
T Consensus       119 ~~dg~~h~~~R~~l~~~fs~~~l~~~-~~~i~~~~-~~ll~~l~~~-~~~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~-  193 (435)
T 2wm5_A          119 VLDDPRHQRLRSIVSRAFTPKVVARI-EAAVRDRA-HRLVSSMIAN-NPDRQADLVSELAGPLPLQIICDM-MGIPKAD-  193 (435)
T ss_dssp             GCCTTHHHHHHHHHHHTCCHHHHHHH-HHHHHHHH-HHHHHHHHHH-CTTSEEEHHHHTTTHHHHHHHHHH-HTCCGGG-
T ss_pred             cCCcHHHHHHHHHhHHhhCHHHHHHH-HHHHHHHH-HHHHHHHHhc-CCCCcEehHHHHHHHHHHHHHHHH-cCCCHHH-
Confidence            89999999999999999999999888 78888887 6666666542 224579998766 78999999999 9997642 


Q ss_pred             CCCCccchHHHHHHHHHHHHHHhhhchh---H---HHHHHHHhhhchHHHHHH--------hhhh---ccCCchHHHHHH
Q 047842          191 SVEFPQTVYANAFNTMEQALLYRHIVPK---I---CWKLQKWLQIGEEKKLSR--------AWKL---SIDSSTSFLRDT  253 (465)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~---~---~~~~~~~~~~~~~~~~~~--------~~~~---~~dl~~~~i~~~  253 (465)
                           ...+.+....+.... ...+.+.   .   ...+..++....+++.+.        ....   -..++++++..+
T Consensus       194 -----~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~~ls~~ei~~~  267 (435)
T 2wm5_A          194 -----HQRIFHWTNVILGFG-DPDLATDFDEFMQVSADIGAYATALAEDRRVNHHDDLTSSLVEAEVDGERLSSREIASF  267 (435)
T ss_dssp             -----HHHHHHHHHHHHHTT-CTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCCBTTBCCCHHHHHHH
T ss_pred             -----HHHHHHHHHHHhccC-CcchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHhhhccCCCCCHHHHHHH
Confidence                 223444333332211 0011010   0   011112222111211110        0000   013789999999


Q ss_pred             HHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhHHHHHhhhCCCCCC
Q 047842          254 AFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYLHAALCETLRLYPP  333 (465)
Q Consensus       254 ~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~  333 (465)
                      +..+++||+|||+.+++|++++|++||++|+|+++|++                          +|++|||+|+||++|+
T Consensus       268 ~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~--------------------------~~l~a~i~E~lRl~p~  321 (435)
T 2wm5_A          268 FILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFD--------------------------GLAPTAVEEIVRWASP  321 (435)
T ss_dssp             HHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHSHH--------------------------HHHHHHHHHHHHHHCS
T ss_pred             HHHHHHHhhHHHHHHHHHHHHHHHhCCHHHHHHHhChH--------------------------hHHHHHHHHHHhhcCc
Confidence            99999999999999999999999999999999999987                          2799999999999999


Q ss_pred             CcCcceeccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccccccCC-CCCCCcC
Q 047842          334 VPYNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKFTAFHA-GPRNCLG  412 (465)
Q Consensus       334 ~~~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~-G~r~C~G  412 (465)
                      ++...|.+. +|+.++||.|||||.|+++.+++||||++| +||++|+|||+  +         ..++|||+ |+|.|+|
T Consensus       322 ~~~~~R~~~-~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f-~dP~~F~PeR~--~---------~~~lpFG~~G~r~C~G  388 (435)
T 2wm5_A          322 VVYMRRTLT-QDIELRGTKMAAGDKVSLWYCSANRDESKF-ADPWTFDLARN--P---------NPHLGFGGGGAHFCLG  388 (435)
T ss_dssp             BCCEEEEES-SCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTCCCTTCC--S---------CCCCTTCSSSTTCCTT
T ss_pred             ccCcceEeC-CCeeECCEEECCCCEEEeCHHHhcCCcccC-cCCCccCCCCC--C---------CCCCCCCCCCCCCCCC
Confidence            995555554 456669999999999999999999999999 99999999994  1         24899999 9999999


Q ss_pred             hHHHHHHHHHHHHHHHhccE-EEeecCCCccCcceEEeecCCCeeEEE
Q 047842          413 KDKALIQMKMVASAVIGNYH-VKVAKGHPVLPRKSIILNMKYGLKVQL  459 (465)
Q Consensus       413 ~~~A~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  459 (465)
                      ++||++|++++++.||++|+ +++.+...  +..+...+...+++|++
T Consensus       389 ~~lA~~e~~~~la~ll~~f~~~~l~~~~~--~~~~~~~~~~~~lpv~~  434 (435)
T 2wm5_A          389 ANLARREIRVAFDELRRQMPDVVATEEPA--RLLSQFIHGIKTLPVTW  434 (435)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTCEECSCCE--ECCCSSBCCEEECEEEC
T ss_pred             HHHHHHHHHHHHHHHHHhCCccEECCCcc--ccccccccCccceeEEe
Confidence            99999999999999999997 99976322  22333334444566664


No 64 
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=100.00  E-value=2e-54  Score=417.88  Aligned_cols=357  Identities=14%  Similarity=0.146  Sum_probs=262.3

Q ss_pred             hhHHHhHHHHhhcCceE--EEeccc-ccccceEEecChhhHHHhHhcCCCCCCCCchhhhhh---------------ccc
Q 047842           45 FHEFLAHDVLKKNRGTF--EFTGPW-FAQMDLIITSDPMNVHYISSKNFSNYPKGPDFRMIM---------------EPL  106 (465)
Q Consensus        45 ~~~~~~~~~~~kyg~v~--~~~~~~-~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~~~~~---------------~~~  106 (465)
                      ++.++. ++ ++||||+  ++   + +|+.++++|++++.++++++++ ..|++++......               ...
T Consensus        47 p~~~~~-~l-r~~gPV~~~~~---~~~g~~~~~vvt~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~  120 (450)
T 3tkt_A           47 LLDRFD-AL-RAEAPVAKVVA---PDDEHEPFWLVSSFDGVMKASKDN-ATFLNNPKSTVFTLRVGEMMAKAITGGSPHL  120 (450)
T ss_dssp             HHHHHH-HH-HHHCSEEEECC---TTCSSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHHHHHHTSCSCS
T ss_pred             chHHHH-HH-HhcCCeecccc---cCCCCCCEEEEecHHHHHHHHhCc-ccccCCCcccccccccccccccccccccccc
Confidence            778888 77 6899999  87   6 6788999999999999999876 5565544321100               113


Q ss_pred             CCcccccCChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHH-HHHHHHHHHHHHhCC
Q 047842          107 GDGVLNADGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVL-KRFAFDNICMLVLGI  185 (465)
Q Consensus       107 ~~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~i~~~~~fG~  185 (465)
                      +.+++..+|++|+++|+++++.|+...++.+ .+.+++.+ +.+++.+.+   .++++|+...+ ..+++++++++ ||.
T Consensus       121 ~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~ll~~l~~---~~~~~dl~~~~~~~~~~~vi~~l-~G~  194 (450)
T 3tkt_A          121 VESLVQMDAPKHPKLRRLTQDWFMPKNLARL-DGEIRKIA-NEAIDRMLG---AGEEGDFMALVAAPYPLHVVMQI-LGV  194 (450)
T ss_dssp             SCCGGGCCTTHHHHHHHHHHTTTSHHHHGGG-HHHHHHHH-HHHHHHHHH---TCSEEEHHHHTTTHHHHHHHHHH-TTC
T ss_pred             ccCcccCCCHHHHHHHHHhhhhhCHHHHHHH-HHHHHHHH-HHHHHHHHh---cCCCEeeHHHHHHHHHHHHHHHH-cCC
Confidence            4578899999999999999999999999887 78888887 666666653   26689998887 69999999996 997


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHHHHH---hh--h----------chhHHHHHHHHhhhchHHHHHHh--------hhh-
Q 047842          186 DPNYLSVEFPQTVYANAFNTMEQALLY---RH--I----------VPKICWKLQKWLQIGEEKKLSRA--------WKL-  241 (465)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~----------~p~~~~~~~~~~~~~~~~~~~~~--------~~~-  241 (465)
                      +.+.      ...+.+....+......   ..  .          .......+..++....+++.+..        .+. 
T Consensus       195 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~  268 (450)
T 3tkt_A          195 PPED------EPKMLFLTQQMFGGQDEDMNKSGLKDLPPEQISQIVAGAVAEFERYFAGLAAERRRNPTDDVATVIANAV  268 (450)
T ss_dssp             CGGG------HHHHHHHHHTTSCCC----------------HHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHTCE
T ss_pred             ChhH------HHHHHHHHHHHhccccchhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhcc
Confidence            6432      12222222221110000   00  0          00000111122221111111110        000 


Q ss_pred             --ccCCchHHHHHHHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchh
Q 047842          242 --SIDSSTSFLRDTAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVY  319 (465)
Q Consensus       242 --~~dl~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  319 (465)
                        -..++++++..+++.+++||+|||+++++|++++|++||++|+|+++|++                           |
T Consensus       269 ~~~~~ls~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~~---------------------------~  321 (450)
T 3tkt_A          269 VDGEPMSDRDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKADRN---------------------------L  321 (450)
T ss_dssp             ETTEECCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCGG---------------------------G
T ss_pred             ccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHCHH---------------------------H
Confidence              01378999999999999999999999999999999999999999999986                           7


Q ss_pred             HHHHHhhhCCCCCCCcCcceeccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCcc
Q 047842          320 LHAALCETLRLYPPVPYNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYK  399 (465)
Q Consensus       320 l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~  399 (465)
                      +++||+|+||++|+++...|.++ +|+.++||.||||+.|+++.+++||||++| +||++|+||||.           ..
T Consensus       322 l~a~i~E~LRl~pp~~~~~R~~~-~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~-~dP~~F~PeR~~-----------~~  388 (450)
T 3tkt_A          322 LPGIVEEAIRWTTPVQHFMRTAA-TDTELCGQKIAAGDWLMLNYVAANHDPAQF-PEPRKFDPTRPA-----------NR  388 (450)
T ss_dssp             HHHHHHHHHHHHCSBCEEEEEES-SSEEETTEEECTTCEEEEEHHHHHTCTTTS-SSTTSCCTTSCT-----------TC
T ss_pred             HHHHHHHHHHhCCCccCcceeeC-CCeeECCEEECCCCEEEEChHHhcCChhhC-CCcCeeCCCCCC-----------CC
Confidence            89999999999999996555554 566779999999999999999999999999 999999999952           24


Q ss_pred             ccccCCCCCCCcChHHHHHHHHHHHHHHHhccE-EEeecCCCccCcceEEeecCCCeeEEEEe
Q 047842          400 FTAFHAGPRNCLGKDKALIQMKMVASAVIGNYH-VKVAKGHPVLPRKSIILNMKYGLKVQLSK  461 (465)
Q Consensus       400 ~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  461 (465)
                      ++|||.|+|.|+|++||++|++++++.|+++|+ +++.+...+  ..+...+....++|++++
T Consensus       389 ~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~--~~~~~~~g~~~lpv~~~~  449 (450)
T 3tkt_A          389 HLAFGAGSHQCLGLHLARLEMRVLLDVLLDRVDSLELAGEPKR--VNSTFVGGFKSLPMRWKA  449 (450)
T ss_dssp             SSTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEEESSCCEE--CCCSSBCCEEECEEEEEE
T ss_pred             CCCCCCcCccCccHHHHHHHHHHHHHHHHHhCCCceeCCCccc--ccCcccCCcccceEEEec
Confidence            899999999999999999999999999999998 676533222  222223333457888765


No 65 
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=100.00  E-value=7.2e-55  Score=419.19  Aligned_cols=376  Identities=18%  Similarity=0.099  Sum_probs=268.5

Q ss_pred             CCCCCCcccchHHHhhcccchhHHHhHHHHhhcCceEEEeccc-----ccccceEEecChhhHHHhHhcCCCCCCCCchh
Q 047842           25 PMRNWPVLGMLPGLLANTWYFHEFLAHDVLKKNRGTFEFTGPW-----FAQMDLIITSDPMNVHYISSKNFSNYPKGPDF   99 (465)
Q Consensus        25 gp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~kyg~v~~~~~~~-----~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~   99 (465)
                      +|.++++++.....   ..+++.++. ++ ++||||+++..|.     +|+.++++|++|+.++++++++ ..|++.+..
T Consensus        22 ~~~~~~~~~~~~~~---~~~p~~~~~-~l-r~~gPv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~~-~~fs~~~~~   95 (433)
T 3ivy_A           22 LPPGFDFTDPAIYA---ERLPVAEFA-EL-RSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRHS-DVFSSYENG   95 (433)
T ss_dssp             CCTTCCTTCHHHHT---TCCCHHHHH-HH-HHHCSEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHCT-TTEESTTTC
T ss_pred             CCCCCCCCCHHHhh---cCCccHHHH-HH-HhcCCEEecccccccccccCCCCEEEEecHHHHHHHHcCh-hhccCCccc
Confidence            44555555543321   124788888 88 7899999983110     5558999999999999999865 556554322


Q ss_pred             hh----------hhcccCCcccccCChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHH
Q 047842          100 RM----------IMEPLGDGVLNADGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDV  169 (465)
Q Consensus       100 ~~----------~~~~~~~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~  169 (465)
                      ..          .....+.+++..+|+.|+++|+++++.|+...++.+ .+.+.+.+ +.+++.+..    ++.+|+...
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~ll~~l~~----~~~~d~~~~  169 (433)
T 3ivy_A           96 VIPRFKNDIAREDIEVQRFVMLNMDAPHHTRLRKIISRGFTPRAVGRL-HDELQERA-QKIAAEAAA----AGSGDFVEQ  169 (433)
T ss_dssp             SCCCCCTTCCHHHHHGGGGSGGGCCTTHHHHHHHHHGGGSCHHHHHTT-HHHHHHHH-HHHHHHHHH----HCEEEHHHH
T ss_pred             ccccccccccccccccccCCccccChHHHHHHHHHHHHhhCHHHHHHH-HHHHHHHH-HHHHHHHhh----CCCeeHHHH
Confidence            11          112335678899999999999999999999999888 78888887 666666642    346899888


Q ss_pred             H-HHHHHHHHHHHHhCCCCCCCCCCCccchHHHHHHHHHHHHHHhhhch----hHHHHHHHHhhhchHHHHHH----hhh
Q 047842          170 L-KRFAFDNICMLVLGIDPNYLSVEFPQTVYANAFNTMEQALLYRHIVP----KICWKLQKWLQIGEEKKLSR----AWK  240 (465)
Q Consensus       170 ~-~~~~~~i~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----~~~~~~~~~~~~~~~~~~~~----~~~  240 (465)
                      + ..+++++++++ ||.+.+.      ...+.+....+.... ......    .....+..++....+++.+.    ...
T Consensus       170 ~~~~~~~~vi~~l-~G~~~~~------~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~  241 (433)
T 3ivy_A          170 VSCELPLQAIAGL-LGVPQED------RGKLFHWSNEMTGNE-DPEYAHIDPKASSAELIGYAMKMAEEKAKNPADDIVT  241 (433)
T ss_dssp             TTSHHHHHHHHHH-HTCCHHH------HHHHHHHHTTCSCCC-CGGGTTCCHHHHHHHHHHHHHHHHHHC-------CHH
T ss_pred             HHHHHHHHHHHHH-cCCCHHH------HHHHHHHHHHHhccC-CchhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH
Confidence            7 99999999996 9964321      111222111111000 000000    01111222222111111110    000


Q ss_pred             -------hccCCchHHHHHHHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhh
Q 047842          241 -------LSIDSSTSFLRDTAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQ  313 (465)
Q Consensus       241 -------~~~dl~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~  313 (465)
                             .-..++++++..+++.+++||+|||+++++|++++|++||++|+++++|++                      
T Consensus       242 ~ll~~~~~~~~ls~~ei~~~~~~ll~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~~----------------------  299 (433)
T 3ivy_A          242 QLIQADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYKKVRP----------------------  299 (433)
T ss_dssp             HHHSCC--CCCCCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHHCC----------------------
T ss_pred             HHHhhhcCCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCcc----------------------
Confidence                   011479999999999999999999999999999999999999999999974                      


Q ss_pred             hccchhHHHHHhhhCCCCCCCcCcceeccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCccc
Q 047842          314 ANNLVYLHAALCETLRLYPPVPYNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIV  393 (465)
Q Consensus       314 l~~l~~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~  393 (465)
                             ++||+|+||++|+++...|.+ .+|+.++||.||||+.|+++.+++||||++| +||++|+|+||.       
T Consensus       300 -------~a~i~E~LRl~p~~~~~~R~~-~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~f-~dp~~F~p~R~~-------  363 (433)
T 3ivy_A          300 -------ETAADEIVRWATPVTAFQRTA-LRDYELSGVQIKKGQRVVMFYRSANFDEEVF-QDPFTFNILRNP-------  363 (433)
T ss_dssp             -------TTHHHHHHHHHCSBCEEEEEE-SSCEEETTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTCCS-------
T ss_pred             -------cchhHHHhhhCcchhceeeEE-CCCEEECCEEECCCCEEEEChhhhcCCchhC-CCcCccCCCCCC-------
Confidence                   569999999999999865555 4566669999999999999999999999999 999999999993       


Q ss_pred             ccCCccccccC-CCCCCCcChHHHHHHHHHHHHHHHhccE-EEeecCCCccCcceEEeecCCCeeEEEEecCC
Q 047842          394 HVPTYKFTAFH-AGPRNCLGKDKALIQMKMVASAVIGNYH-VKVAKGHPVLPRKSIILNMKYGLKVQLSKRSL  464 (465)
Q Consensus       394 ~~~~~~~~pFg-~G~r~C~G~~~A~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  464 (465)
                          ..++||| +|+|.|+|++||++|++++++.|+++|+ +++.++..+.  .+...+....++|++++|..
T Consensus       364 ----~~~l~FGg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~--~~~~~~g~~~lpv~~~~R~~  430 (433)
T 3ivy_A          364 ----NPHVGFGGTGAHYCIGANLARMTINLIFNAVADHMPDLKPISAPERL--RSGWLNGIKHWQVDYTGRCP  430 (433)
T ss_dssp             ----CCCCTTCSSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCCEEC--CCSSBCCEEECEEESCC---
T ss_pred             ----CCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCccEECCCCcee--ccCcccCcceeEEEEecccc
Confidence                2489999 9999999999999999999999999998 9997543322  22222333468999999864


No 66 
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=100.00  E-value=6.8e-54  Score=411.58  Aligned_cols=356  Identities=16%  Similarity=0.141  Sum_probs=261.9

Q ss_pred             cchhHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCchhh---hhh-------cccCCcccc
Q 047842           43 WYFHEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPDFR---MIM-------EPLGDGVLN  112 (465)
Q Consensus        43 ~~~~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~~---~~~-------~~~~~~l~~  112 (465)
                      .+++.++. ++ ++|||||++   ++|   +|+|++|+.++++++++ ..+...+...   ...       ...+.+++.
T Consensus        29 ~~p~~~~~-~l-r~~gpv~~~---~~g---~~vv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   99 (418)
T 3r9b_A           29 ADPYPIYD-RI-RRGGPLALP---EAN---LAVFSSFSDCDDVLRHP-SSCSDRTKSTIFQRQLAAETQPRPQGPASFLF   99 (418)
T ss_dssp             TCCHHHHH-HH-HHHCCEEEG---GGT---EEEECSHHHHHHHHHCT-TEECCGGGCHHHHHHHC---------CCCGGG
T ss_pred             cCchHHHH-HH-HhcCCEEEC---CCC---eEEEecHHHHHHHHcCc-ccccCcccccccccccccccccccccccchhh
Confidence            45788888 77 588999987   665   99999999999999874 3333333211   111       123567899


Q ss_pred             cCChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHH-HHHHHHHHHHHHhCCCCCCCC
Q 047842          113 ADGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVL-KRFAFDNICMLVLGIDPNYLS  191 (465)
Q Consensus       113 ~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~i~~~~~fG~~~~~~~  191 (465)
                      .+|+.|+++|+++++.|+...++.+ .+.+++.+ +.+++ +..    ++.+|+...+ ..++++++++ +||.+.+.  
T Consensus       100 ~dg~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~ll~-l~~----~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--  169 (418)
T 3r9b_A          100 LDPPDHTRLRGLVSKAFAPRVIKRL-EPEITALV-DQLLD-AVD----GPEFNLIDNLAYPLPVAVICR-LLGVPIED--  169 (418)
T ss_dssp             CCTTHHHHHHHHHHGGGSHHHHGGG-HHHHHHHH-HHHHH-TCC----SSEEEHHHHTTTHHHHHHHHH-HHTCCGGG--
T ss_pred             cCCchHHHHHHHhhhhhCHHHHHHH-HHHHHHHH-HHHHh-hhc----cCCeehHHHHhCcCCHHHHHH-HcCCCHHH--
Confidence            9999999999999999999999988 78888887 66666 532    3478976555 6899999999 79987642  


Q ss_pred             CCCccchHHHHHHHHHHHHHHh----hhchhHH-------HHHHHHhhhchHHH--------HH---HhhhhccCCchHH
Q 047842          192 VEFPQTVYANAFNTMEQALLYR----HIVPKIC-------WKLQKWLQIGEEKK--------LS---RAWKLSIDSSTSF  249 (465)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~----~~~p~~~-------~~~~~~~~~~~~~~--------~~---~~~~~~~dl~~~~  249 (465)
                          ...+......+.......    .......       ..+..++....+++        +.   +....-..+++++
T Consensus       170 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~~ls~~e  245 (418)
T 3r9b_A          170 ----EPKFSRASALLAAALDPFLALTGETSDLFDEQMKAGMWLRDYLRALIDERRRTPGEDLMSGLVAVEESGDQLTEDE  245 (418)
T ss_dssp             ----HHHHHHHHHHHHHTTSCHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHHHTTTSCCSSHHHHHHHHHHHSSSCCHHH
T ss_pred             ----HHHHHHHHHHHHhhcCccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHhhhccCCCCHHH
Confidence                122333333222111000    0000000       01111111111110        00   0011111479999


Q ss_pred             HHHHHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhHHHHHhhhCC
Q 047842          250 LRDTAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYLHAALCETLR  329 (465)
Q Consensus       250 i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lR  329 (465)
                      +.++++.+++||+|||+++++|++++|++||++|+|+++|++                           |++|||+|+||
T Consensus       246 i~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~~---------------------------~l~a~i~E~lR  298 (418)
T 3r9b_A          246 IIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALAADGS---------------------------RASAVIEETMR  298 (418)
T ss_dssp             HHHHHHHHHHHHHHTHHHHHHHHHHHHHHSTTHHHHHHHCGG---------------------------GHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH---------------------------hHHHHHHHHHH
Confidence            999999999999999999999999999999999999999986                           78999999999


Q ss_pred             CCCCCcCcceeccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccccccCCCCCC
Q 047842          330 LYPPVPYNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKFTAFHAGPRN  409 (465)
Q Consensus       330 l~p~~~~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~  409 (465)
                      ++|+++...|.+. +|+.++||.|||||.|+++.+++||||++| +||++|+|+|.           ...++|||+|+|.
T Consensus       299 l~p~~~~~~R~~~-~d~~l~g~~Ip~G~~V~~~~~~~~rdp~~~-~dp~~F~p~R~-----------~~~~~~FG~G~r~  365 (418)
T 3r9b_A          299 YDPPVQLVSRYAG-DDLTIGTHTVPKGDTMLLLLAAAHRDPTIV-GAPDRFDPDRA-----------QIRHLGFGKGAHF  365 (418)
T ss_dssp             HSCSBCCEEEEES-SCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCS-----------CCCCCTTCCGGGC
T ss_pred             hCCccccceeEeC-CCeEECCEEECCCCEEEEChHHhcCCcccC-CCcCcCCCCCC-----------CCCCcCCCCcCcc
Confidence            9999998776554 466669999999999999999999999999 99999999992           2358999999999


Q ss_pred             CcChHHHHHHHHHHHHHHHhcc-EEEeecCCCccCcceEEeecCCCeeEEEEecC
Q 047842          410 CLGKDKALIQMKMVASAVIGNY-HVKVAKGHPVLPRKSIILNMKYGLKVQLSKRS  463 (465)
Q Consensus       410 C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  463 (465)
                      |+|++||++|++++++.|+++| ++++.++  ..+..+.+.++..+++|++++|.
T Consensus       366 C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~--~~~~~~~~~~~~~~lpv~~~~r~  418 (418)
T 3r9b_A          366 CLGAPLARLEATVALPALAARFPEARLSGE--PEYKRNLTLRGMSTLSIAVHHHH  418 (418)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHCTTCEECSC--CEECSCSSBCCEEECEEEC----
T ss_pred             CccHHHHHHHHHHHHHHHHHhCccceeCCC--CccccCCcccCcceeEEEecCCC
Confidence            9999999999999999999999 8999764  34445566677778999999884


No 67 
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=100.00  E-value=1.7e-54  Score=411.86  Aligned_cols=351  Identities=14%  Similarity=0.095  Sum_probs=261.3

Q ss_pred             chhHHHhHHHHhhcCceEEEecccc-cccceEEecChhhHHHhHhcCCCCCC-C-Cchh--hhh-----hcccCCccccc
Q 047842           44 YFHEFLAHDVLKKNRGTFEFTGPWF-AQMDLIITSDPMNVHYISSKNFSNYP-K-GPDF--RMI-----MEPLGDGVLNA  113 (465)
Q Consensus        44 ~~~~~~~~~~~~kyg~v~~~~~~~~-~~~~~vvv~~p~~v~~i~~~~~~~~~-~-~~~~--~~~-----~~~~~~~l~~~  113 (465)
                      +++.++. ++ ++|||||++   ++ |+.+.|+++||+.+++++.++  .|. + ++..  ...     ....+.+++..
T Consensus        17 ~p~~~~~-~l-~~yGpv~~~---~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   89 (396)
T 1n40_A           17 RIPDAVA-EL-RTREPIRKV---RTITGAEAWLVSSYALCTQVLEDR--RFSMKETAAAGAPRLNALTVPPEVVNNMGNI   89 (396)
T ss_dssp             SCCHHHH-HH-HHHCSEEEE---ECTTSCEEEEECSHHHHHHHHTCT--TEESGGGGSTTCCCSSCCSSCGGGGGHHHHH
T ss_pred             CccHHHH-HH-HHhCCeeEe---ecCCCceEEEEecHHHHHHHHhCC--CcccccCccccccccccccCCchhhhhhhhH
Confidence            4778888 99 999999999   76 788999999999999999874  354 3 3221  111     11134556665


Q ss_pred             CChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHH-HHHHHHHHHHHHhCCCCCCCCC
Q 047842          114 DGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVL-KRFAFDNICMLVLGIDPNYLSV  192 (465)
Q Consensus       114 ~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~i~~~~~fG~~~~~~~~  192 (465)
                         .|+++|+++++.|+.. ++.+ .+.+.+.+ +.+++.+..   .++++|+...+ ..+++++++. +||.+.+.   
T Consensus        90 ---~h~~~R~~~~~~fs~~-~~~~-~~~i~~~~-~~l~~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~---  156 (396)
T 1n40_A           90 ---ADAGLRKAVMKAITPK-APGL-EQFLRDTA-NSLLDNLIT---EGAPADLRNDFADPLATALHCK-VLGIPQED---  156 (396)
T ss_dssp             ---HHTTCHHHHHHHTSSC-STTH-HHHHHHHH-HHHHHHHHH---HCSCEETTTTTHHHHHHHHHHH-HHTCCGGG---
T ss_pred             ---HHHHHHHHHHHhhChH-HHHh-HHHHHHHH-HHHHHHHHh---cCCCccHHHHHHHHhHHHHHHH-HhCCChhh---
Confidence               9999999999999999 8887 78888887 666666653   25679998665 5899999999 79987642   


Q ss_pred             CCccchHHHHHHHHHHHHHHhhhchh-----HHHHHHHHhhhch------HHHHHHhhh-----hccCCchHHHHHHHHH
Q 047842          193 EFPQTVYANAFNTMEQALLYRHIVPK-----ICWKLQKWLQIGE------EKKLSRAWK-----LSIDSSTSFLRDTAFS  256 (465)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~p~-----~~~~~~~~~~~~~------~~~~~~~~~-----~~~dl~~~~i~~~~~~  256 (465)
                         ...+.+....+.....   ..|.     ....+ +++....      ...+....+     .-..++++++.+++..
T Consensus       157 ---~~~~~~~~~~~~~~~~---~~p~~~~~~~~~~~-~~~~~~i~~~~~~~dll~~ll~~~~~~~~~~l~~~~i~~~~~~  229 (396)
T 1n40_A          157 ---GPKLFRSLSIAFMSSA---DPIPAAKINWDRDI-EYMAGILENPNITTGLMGELSRLRKDPAYSHVSDELFATIGVT  229 (396)
T ss_dssp             ---HHHHHHTHHHHTBCCS---SCCHHHHHHHHHHH-HHHHHHHHCTTCCSHHHHHHHHHHTSGGGTTSCHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHHhcccc---CCCHHHHHHHHHHH-HHHHHHHhCCCCCCCHHHHHHHhhcccccCCCCHHHHHHHHHH
Confidence               1123322222211000   0010     00011 1111100      111111111     1124899999999999


Q ss_pred             HhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhHHHHHhhhCCCCCCCcC
Q 047842          257 FLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYLHAALCETLRLYPPVPY  336 (465)
Q Consensus       257 ~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~  336 (465)
                      +++||+|||+.+++|++++|++||++|+|+++|++                           |++|||+|+||++|+++.
T Consensus       230 ~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------------------~l~a~i~E~lRl~p~~~~  282 (396)
T 1n40_A          230 FFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPE---------------------------LIPAGVEELLRINLSFAD  282 (396)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG---------------------------GHHHHHHHHHHTCCCBCS
T ss_pred             HHHHhhhhHHHHHHHHHHHHHcChHHHHHHHhCHH---------------------------HHHHHHHHHHhhCCCccc
Confidence            99999999999999999999999999999999876                           799999999999999995


Q ss_pred             cceeccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccccccCCCCCCCcChHHH
Q 047842          337 NHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKFTAFHAGPRNCLGKDKA  416 (465)
Q Consensus       337 ~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A  416 (465)
                      ..+|.+.+|+.++||.|||||.|+++.+++||||++| +||++|+||||.+          ..++|||+|+|.|+|++||
T Consensus       283 ~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~~----------~~~~~FG~G~r~C~G~~lA  351 (396)
T 1n40_A          283 GLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHF-PNPGSIELDRPNP----------TSHLAFGRGQHFCPGSALG  351 (396)
T ss_dssp             CEEEEESSCEEETTEEECTTCEEEECHHHHHTCTTTS-SSTTSCCTTCSST----------TCSSTTCCGGGCCTTHHHH
T ss_pred             ccceecCCCeeECCEEECCCCEEEechHHhhCChhhC-CChhhCCCCCCCC----------CCCCCCCCCCcCCCCHHHH
Confidence            4444444566779999999999999999999999999 9999999999963          2489999999999999999


Q ss_pred             HHHHHHHHHHHHhcc-EEEeecC-CCccCcceEEeecCCCeeEEE
Q 047842          417 LIQMKMVASAVIGNY-HVKVAKG-HPVLPRKSIILNMKYGLKVQL  459 (465)
Q Consensus       417 ~~e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  459 (465)
                      ++|++++++.|+++| ++++.++ .++.+..+.+.+...+++|++
T Consensus       352 ~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~  396 (396)
T 1n40_A          352 RRHAQIGIEALLKKMPGVDLAVPIDQLVWRTRFQRRIPERLPVLW  396 (396)
T ss_dssp             HHHHHHHHHHHHHHCTTCEESSCGGGCCBCCSBSBCCBSCCEEEC
T ss_pred             HHHHHHHHHHHHHhCccccccCCccccccccccccCCcceeeeeC
Confidence            999999999999999 5999764 344555556666667787763


No 68 
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=100.00  E-value=2.5e-53  Score=403.02  Aligned_cols=354  Identities=15%  Similarity=0.106  Sum_probs=262.8

Q ss_pred             cchhHHHhHHHHhhcCceEEEecccccc----cceEEecChhhHHHhHhcCCCCCCCCchhhhhh--cccCCcccccCCh
Q 047842           43 WYFHEFLAHDVLKKNRGTFEFTGPWFAQ----MDLIITSDPMNVHYISSKNFSNYPKGPDFRMIM--EPLGDGVLNADGD  116 (465)
Q Consensus        43 ~~~~~~~~~~~~~kyg~v~~~~~~~~~~----~~~vvv~~p~~v~~i~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~g~  116 (465)
                      .+++.++. ++ ++|||||++   ++++    .++|+|+||+.+++++++. ..|++++......  ...+.+++..+|+
T Consensus        12 ~~p~~~~~-~l-r~yGpv~~~---~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~g~   85 (384)
T 3oo3_A           12 LDPVPEFE-EL-QKAGPLHEY---DTEPGMDGRKQWLVTGHDEVRAILADH-ERFSSMRPVDDEADRALLPGILQAYDPP   85 (384)
T ss_dssp             TEECHHHH-HH-HHTCSEECC---CCC------CEEEECCHHHHHHHHHCT-TTEECSCCCC-----CCCTTCGGGCCTT
T ss_pred             cChhHHHH-HH-HhcCCeeec---ccccccCCCCEEEEcCHHHHHHHHhCc-hhccCCccccccccccccccccccCCCh
Confidence            35788888 88 599999998   7766    8999999999999999654 6777766544222  2334567888999


Q ss_pred             hHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcc
Q 047842          117 LWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVLKRFAFDNICMLVLGIDPNYLSVEFPQ  196 (465)
Q Consensus       117 ~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~i~~~~~fG~~~~~~~~~~~~  196 (465)
                      .|+++|+++++.|+...++.+ .+.+.+.+ +.+++.+.+   .++++|+.+.+...+.++++..+||.+.+.      .
T Consensus        86 ~~~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~---~~~~~d~~~~~~~~~~~~v~~~~~G~~~~~------~  154 (384)
T 3oo3_A           86 DHTRLRRTVAPAYSARRMERL-RPRIEEIV-EECLDDFES---VGAPVDFVRHAAWPIPAYIACEFLGVPRDD------Q  154 (384)
T ss_dssp             HHHHHHHHHGGGGCHHHHHHH-HHHHHHHH-HHHHHHHHH---SCSSEEHHHHTTTHHHHHHHHHHHTCCGGG------H
T ss_pred             hHHHHHHHHHHhhCHHHHHHH-HHHHHHHH-HHHHHHHHh---cCCCccHHHHHHHHHHHHHHHHHcCCCHHH------H
Confidence            999999999999999999988 78888887 666666643   466899999998887777777789987542      2


Q ss_pred             chHHHHHHHHHHHHHHhhhchhHHHHHHHHhhhchHHHHHH--------hhh-hccCCchHHHHHHHHHHhhcchhhHHH
Q 047842          197 TVYANAFNTMEQALLYRHIVPKICWKLQKWLQIGEEKKLSR--------AWK-LSIDSSTSFLRDTAFSFLGAGNDTISS  267 (465)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~--------~~~-~~~dl~~~~i~~~~~~~~~ag~~tt~~  267 (465)
                      ..+......+........ .......+..++....+++.++        ... .-..++++++..+++.+++||+|||++
T Consensus       155 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~d~l~~ll~~~~~~l~~~~l~~~~~~~~~AG~~Tta~  233 (384)
T 3oo3_A          155 AELSRMIRESRESRLPRQ-RTLSGLGIVNYTKRLTSGKRRDPGDGMIGVIVREHGAEISDEELAGLAEGNLIMAAEQMAA  233 (384)
T ss_dssp             HHHHHHHHHHHHCSCHHH-HHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhccCChHH-HHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHhhHHHHHH
Confidence            234433333322000000 0001111122222111111110        000 112479999999999999999999999


Q ss_pred             HHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhHHHHHhhhCCCCCCCcCcceeccCcccc
Q 047842          268 GLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYLHAALCETLRLYPPVPYNHKIAGQADIL  347 (465)
Q Consensus       268 ~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r~~~~~~~~  347 (465)
                      +++|++++|++||++|+|+++|++                .           ++|||+|+||++|+++...+|.+.+|+.
T Consensus       234 ~l~~~l~~L~~~P~~~~~l~~E~~----------------~-----------l~a~i~E~lRl~p~~~~~~~R~~~~d~~  286 (384)
T 3oo3_A          234 QLAVAVLLLVTHPDQMALLREKPE----------------L-----------IDSATEEVLRHASIVEAPAPRVALADVR  286 (384)
T ss_dssp             HHHHHHHHHHTSHHHHHHHHHCGG----------------G-----------HHHHHHHHHHHHCSCSCCSCEEESSCEE
T ss_pred             HHHHHHHHHHHCHHHHHHHHhCHH----------------H-----------HHHHHHHHHHhCCcccCCcceeeCCCEE
Confidence            999999999999999999999997                2           7999999999999998754444445677


Q ss_pred             CCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccccccCCCCCCCcChHHHHHHHHHHHHHH
Q 047842          348 PSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKFTAFHAGPRNCLGKDKALIQMKMVASAV  427 (465)
Q Consensus       348 ~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~l  427 (465)
                      ++||.|||||.|+++.+++||      +||++|+||||           +..++|||+|+|.|||++||++|++++++.|
T Consensus       287 ~~g~~Ip~Gt~V~~~~~~~~r------~dp~~F~PeR~-----------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~l  349 (384)
T 3oo3_A          287 MAGRDIHAGDVLTCSMLATNR------APGDRFDITRE-----------KATHMAFGHGIHHCIGAPLARLQLRVALPAV  349 (384)
T ss_dssp             ETTEEECTTCEEEECHHHHHC------CTTCCCCTTCS-----------CCCCCTTCCSTTSCTTHHHHHHHHHHHHHHH
T ss_pred             ECCEEECCCCEEEEehhhcCC------CCcceeCCCCC-----------CCCcCCCCCCCcCCCCHHHHHHHHHHHHHHH
Confidence            799999999999999999999      79999999996           2358999999999999999999999999999


Q ss_pred             Hhcc-EEEeecCC-CccCcc-eEEeecCCCeeEE
Q 047842          428 IGNY-HVKVAKGH-PVLPRK-SIILNMKYGLKVQ  458 (465)
Q Consensus       428 l~~f-~~~~~~~~-~~~~~~-~~~~~~~~~~~~~  458 (465)
                      +++| ++++.++. ++.+.. +.+.+....++|+
T Consensus       350 l~~f~~~~l~~~~~~~~~~~~~~~~~~~~~lpv~  383 (384)
T 3oo3_A          350 VGRFPSLRLAVPEEDLRFKPGRPAPFAVEELPLE  383 (384)
T ss_dssp             HHHCTTCEESSCGGGCCEECSSSSCCEESCCEEE
T ss_pred             HHhCCCCeeCCCCccceeecccccccCcceeeee
Confidence            9999 99997643 344443 4444555567665


No 69 
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=100.00  E-value=1.1e-53  Score=402.39  Aligned_cols=343  Identities=16%  Similarity=0.172  Sum_probs=255.0

Q ss_pred             hHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCch-----hhhhh--c--c---cCCccccc
Q 047842           46 HEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPD-----FRMIM--E--P---LGDGVLNA  113 (465)
Q Consensus        46 ~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~-----~~~~~--~--~---~~~~l~~~  113 (465)
                      |.++. ++ ++||||+++     |  +.+++++|+.+++++.++ ..|++++.     +....  .  .   .|.+++..
T Consensus         2 ~~~~~-~l-r~~Gpv~~~-----g--~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   71 (368)
T 1io7_A            2 YDWFS-EM-RKKDPVYYD-----G--NIWQVFSYRYTKEVLNNF-SKFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTS   71 (368)
T ss_dssp             HHHHH-HH-HHHCSEEEC-----S--SCEEECSHHHHHHHHHCT-TTEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGGC
T ss_pred             CHHHH-HH-HhcCCeEeE-----C--CEEEEecHHHHHHHHcCc-ccccccccccccccccccccccccccccccccccC
Confidence            45666 66 589999865     2  589999999999999975 56776653     22110  1  1   22678889


Q ss_pred             CChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHH-HHHHHHHHHHHHhCCCCCCCCC
Q 047842          114 DGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVL-KRFAFDNICMLVLGIDPNYLSV  192 (465)
Q Consensus       114 ~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~i~~~~~fG~~~~~~~~  192 (465)
                      +|+.|+++|+++.+.|+...++.+ .+.+++.+ +.+++.+ .   .+ .+|+.+.+ ..+++++++++ ||.+.+..  
T Consensus        72 ~g~~h~~~R~~~~~~f~~~~~~~~-~~~i~~~~-~~l~~~l-~---~g-~~d~~~~~~~~~~~~vi~~~-~G~~~~~~--  141 (368)
T 1io7_A           72 DPPLHDELRSMSADIFSPQKLQTL-ETFIRETT-RSLLDSI-D---PR-EDDIVKKLAVPLPIIVISKI-LGLPIEDK--  141 (368)
T ss_dssp             CTTHHHHHHGGGTTTTCHHHHHHH-HHHHHHHH-HHHHHTC-C---TT-SEEHHHHTTTHHHHHHHHHH-HTCCGGGH--
T ss_pred             CChHHHHHHHHHHhhcCHHHHHHH-HHHHHHHH-HHHHHHh-h---cC-CccHHHHHHHHHHHHHHHHH-hCCCHHHH--
Confidence            999999999999999999999887 78888887 6666655 3   22 69999876 78999999999 99876421  


Q ss_pred             CCccchHHHHHHHHHHHHHHhhhchhHHH-------HHHHHhhhch---HHHHHHhhhhccCCchHHHHHHHHHHhhcch
Q 047842          193 EFPQTVYANAFNTMEQALLYRHIVPKICW-------KLQKWLQIGE---EKKLSRAWKLSIDSSTSFLRDTAFSFLGAGN  262 (465)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-------~~~~~~~~~~---~~~~~~~~~~~~dl~~~~i~~~~~~~~~ag~  262 (465)
                          ..+......+....    ..|....       .+..++....   ...+....+.  .++++++.+++..+++||+
T Consensus       142 ----~~~~~~~~~~~~~~----~~p~~~~~~~~~~~~~~~~~~~~i~~~~d~l~~ll~~--~l~~~ei~~~~~~l~~AG~  211 (368)
T 1io7_A          142 ----EKFKEWSDLVAFRL----GKPGEIFELGKKYLELIGYVKDHLNSGTEVVSRVVNS--NLSDIEKLGYIILLLIAGN  211 (368)
T ss_dssp             ----HHHHHHGGGCTTSC----CCTTCHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHTS--SCCHHHHHHHHHHHHHTTH
T ss_pred             ----HHHHHHHHHHHhcc----CChHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhc--cCCHHHHHHHHHHHHHhhh
Confidence                12222111111000    0111000       0111111000   0111111111  5899999999999999999


Q ss_pred             hhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhHHHHHhhhCCCCCCCcCcceecc
Q 047842          263 DTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYLHAALCETLRLYPPVPYNHKIAG  342 (465)
Q Consensus       263 ~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r~~~  342 (465)
                      |||+++++|++++|++|| +|+|+++| +                           |++|||+|+||++|+++...|.+ 
T Consensus       212 dTt~~~l~~~l~~L~~~P-~~~~l~~E-~---------------------------~l~a~i~E~lRl~p~~~~~~R~~-  261 (368)
T 1io7_A          212 ETTTNLISNSVIDFTRFN-LWQRIREE-N---------------------------LYLKAIEEALRYSPPVMRTVRKT-  261 (368)
T ss_dssp             HHHHHHHHHHHHHHHHTT-CHHHHHHH-T---------------------------CHHHHHHHHHHHSCSBCCEEEEE-
T ss_pred             HHHHHHHHHHHHHHHhCh-HHHHHHhc-c---------------------------hHHHHHHHHHHhCcccccCceee-
Confidence            999999999999999999 99999999 6                           68999999999999999555544 


Q ss_pred             CccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccccccCCCCCCCcChHHHHHHHHH
Q 047842          343 QADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKFTAFHAGPRNCLGKDKALIQMKM  422 (465)
Q Consensus       343 ~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~  422 (465)
                      .+|+.++||.|||||.|+++.+++||||++| +||++|+|||+  +         ..++|||+|+|.|+|++||++|+++
T Consensus       262 ~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~--~---------~~~~~FG~G~r~C~G~~lA~~e~~~  329 (368)
T 1io7_A          262 KERVKLGDQTIEEGEYVRVWIASANRDEEVF-HDGEKFIPDRN--P---------NPHLSFGSGIHLCLGAPLARLEARI  329 (368)
T ss_dssp             SSCEEETTEEECTTCEEEECHHHHTTCTTTS-TTTTSCCTTCC--S---------CCCCTTCCGGGSCTTHHHHHHHHHH
T ss_pred             CCCeeECCEEECCCCEEEecHhhhCCChhhC-CCcceeCCCCC--C---------CCCcCCCCCccCCCCHHHHHHHHHH
Confidence            4566679999999999999999999999999 99999999993  1         2489999999999999999999999


Q ss_pred             HHHHHHhccE-EEeecCCCccCcceEEeecCCCeeEEEEecC
Q 047842          423 VASAVIGNYH-VKVAKGHPVLPRKSIILNMKYGLKVQLSKRS  463 (465)
Q Consensus       423 ~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  463 (465)
                      +++.|+++|+ +++.+ .++  ..+.+.+...+++|++++|+
T Consensus       330 ~l~~ll~~f~~~~~~~-~~~--~~~~~~~~~~~lpv~~~~r~  368 (368)
T 1io7_A          330 AIEEFSKRFRHIEILD-TEK--VPNEVLNGYKRLVVRLKSNE  368 (368)
T ss_dssp             HHHHHHTTCSEEEEEE-EEE--CCCSSBCCEEEEEEEEEC--
T ss_pred             HHHHHHHhCCCCEecC-cee--ccCCcccCCceeEEEeccCC
Confidence            9999999995 99976 222  22344555567999999985


No 70 
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=100.00  E-value=1.5e-52  Score=401.70  Aligned_cols=358  Identities=13%  Similarity=0.130  Sum_probs=262.8

Q ss_pred             cchhHHHhHHHHhhcCceEEEecccc-cccceEEecChhhHHHhHhcCCCCCCCCchh-----hh-----h-hcccCCcc
Q 047842           43 WYFHEFLAHDVLKKNRGTFEFTGPWF-AQMDLIITSDPMNVHYISSKNFSNYPKGPDF-----RM-----I-MEPLGDGV  110 (465)
Q Consensus        43 ~~~~~~~~~~~~~kyg~v~~~~~~~~-~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~-----~~-----~-~~~~~~~l  110 (465)
                      .+++.++. +++++ |||+.+   .. ++.+.++|++++.++++++++ ..|++....     ..     . ....+.++
T Consensus        38 ~~p~~~~~-~lr~~-gpv~~~---~~~~~~~~~vvt~~~~v~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~~~~~~l  111 (426)
T 3rwl_A           38 DSVGEYFK-RLRKD-DPVHYC---ADSAFGPYWSITKYNDIMHVDTNH-DIFSSDAGYGGIIIDDGIQKGGDGGLDLPNF  111 (426)
T ss_dssp             TCHHHHHH-HHHHH-CSEEEE---SCCTTCSEEEECSHHHHHHHHHCT-TTEECCGGGTCSSSSCCC-------CCCCCG
T ss_pred             CCccHHHH-HHHhc-CCeeec---cCCCCCCEEEEcCHHHHHHHHcCC-cccccccccCCCCcccccccccccccccCcc
Confidence            35788888 88765 999988   55 456799999999999999876 556554321     11     1 12234568


Q ss_pred             cccCChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHH-HHHHHHHHHHHHhCCCCCC
Q 047842          111 LNADGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVL-KRFAFDNICMLVLGIDPNY  189 (465)
Q Consensus       111 ~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~i~~~~~fG~~~~~  189 (465)
                      +..+|+.|+++|+++++.|+...++.+ .+.+++.+ +.+++.+.    .++++|+...+ ..++.++++. +||.+.+.
T Consensus       112 ~~~dg~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~ll~~l~----~~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~  184 (426)
T 3rwl_A          112 IAMDRPRHDEQRKAVSPIVAPANLAAL-EGTIRERV-SKTLDGLP----VGEEFDWVDRVSIEITTQMLAT-LFDFPFEE  184 (426)
T ss_dssp             GGCCTTHHHHHHHHHGGGGCHHHHHHH-HHHHHHHH-HHHHHTSC----SSSCEEHHHHTHHHHHHHHHHH-HHTCCGGG
T ss_pred             cccCchHHHHHHHHhhhhhCHHHHHHH-HHHHHHHH-HHHHHHhh----cCCCcchHHHHHHHHHHHHHHH-HcCCCHHH
Confidence            899999999999999999999999988 78888887 55655553    35679987776 6788888887 79986432


Q ss_pred             CCCCCccchHHHHHHHHHHHHHHhhhch------hHHHHHHHHhhhchHHH---------HHHhhh--hccCCchHHHHH
Q 047842          190 LSVEFPQTVYANAFNTMEQALLYRHIVP------KICWKLQKWLQIGEEKK---------LSRAWK--LSIDSSTSFLRD  252 (465)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~~~~~~~~~~~~~~~~---------~~~~~~--~~~dl~~~~i~~  252 (465)
                            ...+......+.... .....+      .....+..++....+++         +.....  .-.+++++++..
T Consensus       185 ------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~dll~~ll~~~~~~~ls~~el~~  257 (426)
T 3rwl_A          185 ------RRKLTRWSDVTTAAP-GGGVVESWDQRKTELLECAAYFQVLWNERVNKDPGNDLISMLAHSPATRNMTPEEYLG  257 (426)
T ss_dssp             ------THHHHHHHHHHTCCT-TSSSCSSHHHHHHHHHHHHHHHHHHHHHHHTSCCCSSHHHHHHHCGGGGGCCHHHHHH
T ss_pred             ------HHHHHHHHHHHHhcc-CccccccHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHhcccCCCCCHHHHHH
Confidence                  122222221111000 000000      00111122222111111         000000  011479999999


Q ss_pred             HHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhHHHHHhhhCCCCC
Q 047842          253 TAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYLHAALCETLRLYP  332 (465)
Q Consensus       253 ~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p  332 (465)
                      +++.+++||+|||+++++|++++|++||++|+++++|+.                           |++++|+|+||++|
T Consensus       258 ~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~E~~---------------------------~l~a~i~E~LRl~p  310 (426)
T 3rwl_A          258 NVLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKANPA---------------------------LVETMVPEIIRWQT  310 (426)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG---------------------------GHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhChH---------------------------hHHHHHHHHHHhcC
Confidence            999999999999999999999999999999999999875                           79999999999999


Q ss_pred             CCcCcceeccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccccccCCCCCCCcC
Q 047842          333 PVPYNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKFTAFHAGPRNCLG  412 (465)
Q Consensus       333 ~~~~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G  412 (465)
                      +++...|.++ +|+.++||.||||+.|+++.+++||||++| +||++|+|+||..          ..++|||+|+|.|+|
T Consensus       311 ~~~~~~R~~~-~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~f-~dP~~F~p~R~~~----------~~~l~FG~G~r~C~G  378 (426)
T 3rwl_A          311 PLAHMRRTAI-ADSELGGKTIRKGDKVVMWYYSGNRDDEVI-DRPEEFIIDRPRP----------RQHLSFGFGIHRCVG  378 (426)
T ss_dssp             SBCCEEEEES-SCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCSCT----------TCCSTTCCSTTSCSS
T ss_pred             ccccCceecC-CCeEECCEEECCCCEEEechHHhCCCcccc-CCcCccCCCCCCC----------CCccCCCCCCcCCcc
Confidence            9998555555 566669999999999999999999999999 9999999999943          358999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcc-EEEeecCCCccCcceEEeecCCCeeEEEEe
Q 047842          413 KDKALIQMKMVASAVIGNY-HVKVAKGHPVLPRKSIILNMKYGLKVQLSK  461 (465)
Q Consensus       413 ~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  461 (465)
                      ++||++|++++++.|+++| ++++.++..+  ..+...+....++|+++|
T Consensus       379 ~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~--~~~~~~~g~~~lpv~~~P  426 (426)
T 3rwl_A          379 NRLAEMQLRILWEEILTRFSRIEVMAEPER--VRSNFVRGYAKMMVRVHA  426 (426)
T ss_dssp             HHHHHHHHHHHHHHHHTTCSEEEECSCCEE--CCCSSBCCEEECEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeeCCCCcc--cccccccCcceeeEEEeC
Confidence            9999999999999999999 9999764333  223333444568888875


No 71 
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=100.00  E-value=1.3e-52  Score=394.66  Aligned_cols=339  Identities=14%  Similarity=0.128  Sum_probs=252.9

Q ss_pred             hHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCc-hhh-hh-----h-cccC----Cccccc
Q 047842           46 HEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGP-DFR-MI-----M-EPLG----DGVLNA  113 (465)
Q Consensus        46 ~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~-~~~-~~-----~-~~~~----~~l~~~  113 (465)
                      +..+. ++ ++|||||++   + |   .+++++|+.+++++.++ +.|++++ .+. ..     . ...+    .+++..
T Consensus         2 ~~~~~-~l-r~~gpv~~~---~-g---~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   71 (367)
T 3b4x_A            2 YDWFK-QM-RKESPVYYD---G-K---VWNLFKYEDCKMVLNDH-KRFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTS   71 (367)
T ss_dssp             HHHHH-HH-HHHCSEEEC---S-S---SEEECSHHHHHHHHHCT-TTEECCCSSTTTTHHHHHHTCCCCCCGGGSSGGGC
T ss_pred             CHHHH-HH-HHcCCceee---C-C---EEEEecHHHHHHHHcCc-hhhccCcccccccccccccccchhhcccccccccC
Confidence            44566 66 589999988   5 3   89999999999999975 4676653 222 12     2 2334    678889


Q ss_pred             CChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHH-HHHHHHHHHHHHhCCCCCCCCC
Q 047842          114 DGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVL-KRFAFDNICMLVLGIDPNYLSV  192 (465)
Q Consensus       114 ~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~i~~~~~fG~~~~~~~~  192 (465)
                      +|+.|+++|+++++.|+...++.   +.+++.+ +.+++.+.     | .+|+...+ ..+++++++. +||.+ +.   
T Consensus        72 dg~~h~~~R~~~~~~fs~~~l~~---~~i~~~~-~~l~~~l~-----g-~~d~~~~~~~~~~~~vi~~-~~G~~-~~---  136 (367)
T 3b4x_A           72 DPPLHDELRNLTADAFNPSNLPV---DFVREVT-VKLLSELD-----E-EFDVIESFAIPLPILVISK-MLGIN-PD---  136 (367)
T ss_dssp             CTTHHHHHHHTTGGGGSGGGSCH---HHHHHHH-HHHHHTCC-----S-EEEHHHHTTTHHHHHHHHH-HHTCC-CC---
T ss_pred             CchhHHHHHHHHHHhcCHhhhcc---hHHHHHH-HHHHHhcc-----C-CcchHHHHHHhhHHHHHHH-HcCCC-Cc---
Confidence            99999999999999999998876   5666665 55555554     3 49998765 7999999999 79997 41   


Q ss_pred             CCccchHHHHHHHHHHHHHHhhhchh------HHHHHHHHhhhchHHHHHH----hhhhc-c-CCchHHHHHHHHHHhhc
Q 047842          193 EFPQTVYANAFNTMEQALLYRHIVPK------ICWKLQKWLQIGEEKKLSR----AWKLS-I-DSSTSFLRDTAFSFLGA  260 (465)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~p~------~~~~~~~~~~~~~~~~~~~----~~~~~-~-dl~~~~i~~~~~~~~~a  260 (465)
                         ...+......+.....  . .|.      ....+..++....+++.+.    ....+ . .++++++.+++..+++|
T Consensus       137 ---~~~~~~~~~~~~~~~~--~-~p~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~ls~~el~~~~~~l~~A  210 (367)
T 3b4x_A          137 ---VKKVKDWSDLVALRLG--R-ADEIFSIGRKYLELISFSKKELDSRKGKEIVDLTGKIANSNLSELEKEGYFILLMIA  210 (367)
T ss_dssp             ---HHHHHHHHHHHHTTTT--S-TTGGGCCCHHHHHHHHHHHHHHHHHTTTCCSSHHHHHHTSSSCHHHHHHHHHHHHHT
T ss_pred             ---HHHHHHHHHHHHhccC--C-ChhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHhccCCHHHHHHHHHHHHHh
Confidence               2234443333322110  0 111      1111222222211111110    00000 0 47999999999999999


Q ss_pred             chhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhHHHHHhhhCCCCCCCcCccee
Q 047842          261 GNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYLHAALCETLRLYPPVPYNHKI  340 (465)
Q Consensus       261 g~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r~  340 (465)
                      |+|||+++++|++++|++ |++|+|+++|++                             +|||+|+||++|+++...|.
T Consensus       211 G~eTt~~~l~~~l~~L~~-P~~~~~l~~e~~-----------------------------~a~i~E~lRl~p~~~~~~R~  260 (367)
T 3b4x_A          211 GNETTTNLIGNAIEDFTL-YNSWDYVREKGA-----------------------------LKAVEEALRFSPPVMRTIRV  260 (367)
T ss_dssp             TTHHHHHHHHHHHHHHHH-TTCHHHHHHHCS-----------------------------HHHHHHHHHHSCSBCCEEEE
T ss_pred             hhHHHHHHHHHHHHHHhC-HHHHHHHHhCCc-----------------------------hHHHHHHHHhcCcccCeeEE
Confidence            999999999999999999 999999999853                             68999999999999955555


Q ss_pred             ccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccccccCCCCCCCcChHHHHHHH
Q 047842          341 AGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKFTAFHAGPRNCLGKDKALIQM  420 (465)
Q Consensus       341 ~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~  420 (465)
                      +. +|+.++||.|||||.|+++.+++||||++| +||++|+||||.           ..++|||+|+|.|+|++||++|+
T Consensus       261 ~~-~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~~-----------~~~l~FG~G~r~C~G~~lA~~e~  327 (367)
T 3b4x_A          261 TK-EKVKIRDQVIDEGELVRVWIASANRDEEVF-KDPDSFIPDRTP-----------NPHLSFGSGIHLCLGAPLARLEA  327 (367)
T ss_dssp             ES-SCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCSS-----------CCCCTTCCSTTSCTTHHHHHHHH
T ss_pred             eC-CCeEECCEEECCCCEEEEChhhhcCCcccC-CCccccCCCCCC-----------CCCcCCCCCCccCccHHHHHHHH
Confidence            54 466669999999999999999999999999 999999999984           24899999999999999999999


Q ss_pred             HHHHHHHHhcc-EEEeecCCCccCcceEEeecCCCeeEEEEe
Q 047842          421 KMVASAVIGNY-HVKVAKGHPVLPRKSIILNMKYGLKVQLSK  461 (465)
Q Consensus       421 ~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  461 (465)
                      +++++.|+++| ++++.++ +  +..+.+.+...+++|++++
T Consensus       328 ~~~l~~ll~~f~~~~l~~~-~--~~~~~~~~~~~~lpv~~~~  366 (367)
T 3b4x_A          328 RIALEEFAKKFRVKEIVKK-E--KIDNEVLNGYRKLVVRVER  366 (367)
T ss_dssp             HHHHHHHHHHEEEEEEEEE-E--ECCCSSBCSEEEEEEEEEE
T ss_pred             HHHHHHHHHhCCCceeCCc-c--ccccccccCcceEEEEecC
Confidence            99999999999 7999864 3  3334445555678888865


No 72 
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=100.00  E-value=1.8e-52  Score=399.31  Aligned_cols=371  Identities=15%  Similarity=0.118  Sum_probs=264.5

Q ss_pred             CCCCCccc---chHHHhhcccchhHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCch--hh
Q 047842           26 MRNWPVLG---MLPGLLANTWYFHEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPD--FR  100 (465)
Q Consensus        26 p~~~p~~G---~~~~~~~~~~~~~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~--~~  100 (465)
                      +.++|.+|   ....+..+   +|.++. +++ ++|||+.+     ++.++++|++++.|+++++++ ..|+....  ..
T Consensus        17 ~~~~P~~~~dp~~~~~~~d---P~~~~~-~lR-~~gPV~~~-----~~~~~~~vt~~~~v~~vl~d~-~~fs~~~~~~~~   85 (412)
T 4dnj_A           17 GAGVPHLGIDPFALDYFAD---PYPEQE-TLR-EAGPVVYL-----DKWNVYGVARYAEVYAVLNDP-LTFCSSRGVGLS   85 (412)
T ss_dssp             STTSCEECCCTTSHHHHHS---CHHHHH-HHH-HHCSSEEE-----TTTTEEEECSHHHHHHHHTCT-TTEESTTCSSSS
T ss_pred             CCCCCccCCCCCCHHHHhC---cHHHHH-HHH-hcCCEEEE-----CCCCEEEECCHHHHHHHHcCC-ccccCCCccccc
Confidence            45688887   23345444   787887 765 58999765     456789999999999999875 44433211  11


Q ss_pred             hhh----cccCCcccccCChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccH-HHHHHHHHH
Q 047842          101 MIM----EPLGDGVLNADGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDL-QDVLKRFAF  175 (465)
Q Consensus       101 ~~~----~~~~~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl-~~~~~~~~~  175 (465)
                      ...    ...+..++..||++|+++|+++++.|+...++.+ ++.+++.+ +.+++.+.   ..++.+|+ .++...++.
T Consensus        86 ~~~~~~~~~~~~~~~~~Dg~~H~r~R~~~~~~Fs~~~l~~~-~~~i~~~~-~~l~~~~~---~~~~~~D~v~~~~~~~~~  160 (412)
T 4dnj_A           86 DFKKEKPWRPPSLILEADPPAHTRTRAVLSKVLSPATMKRL-RDGFAAAA-DAKIDELL---ARGGNIDAIADLAEAYPL  160 (412)
T ss_dssp             CTTTSCCSSCCCTTTTCCTTHHHHHHHHHHHHTCHHHHHHH-HHHHHHHH-HHHHHHHH---HTTSEEETCCCCCCHHHH
T ss_pred             cccccccccCCCccccCChHHHHHHHhhcccccCHHHHHHh-hHHHHHHH-HHHHHhhh---ccCCCceeHHHHHhhhhH
Confidence            111    1223457889999999999999999999999998 78888887 55555443   23445664 455667888


Q ss_pred             HHHHHHHhCCCCCCCCCCCccchHHHHHHHHHHHHHHhhhchhHH----HHHHHHhhhchH---------HHHHHhhhhc
Q 047842          176 DNICMLVLGIDPNYLSVEFPQTVYANAFNTMEQALLYRHIVPKIC----WKLQKWLQIGEE---------KKLSRAWKLS  242 (465)
Q Consensus       176 ~i~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~----~~~~~~~~~~~~---------~~~~~~~~~~  242 (465)
                      ++++.+ +|.....      ...+......+..............    ..+..+.....+         ..+-.....-
T Consensus       161 ~~i~~l-~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  233 (412)
T 4dnj_A          161 SVFPDA-MGLKQEG------RENLLPYAGLVFNAFGPPNELRQSAIERSAPHQAYVAEQCQRPNLAPGGFGACIHAFSDT  233 (412)
T ss_dssp             HHHHHH-HTCCSTT------GGGHHHHHHHHHHHTSCSSHHHHHHHHTCHHHHHHHHHHTSGGGSCTTSHHHHHHHTTTT
T ss_pred             hHHHHH-cCCchhh------hhhhhhhhhcccccccccHHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhhHhhhhc
Confidence            888887 5554332      1222222222222111000000000    000000000000         0000001111


Q ss_pred             cCCchHHHHHHHHHHhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhHHH
Q 047842          243 IDSSTSFLRDTAFSFLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYLHA  322 (465)
Q Consensus       243 ~dl~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a  322 (465)
                      .+++++++.+++..+++||+|||+++++|++++|++||++|+||++|..                           |+.+
T Consensus       234 ~~l~~~e~~~~~~~l~~AG~eTTa~~l~~~~~~L~~~P~~~~~Lr~~~~---------------------------~~~~  286 (412)
T 4dnj_A          234 GEITPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARLRADPS---------------------------LARN  286 (412)
T ss_dssp             TSSCTTHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHCGG---------------------------GHHH
T ss_pred             cchhHHHHHHHHHHHHhccchhHHHHHHHHHHHHhhCHHHHHHHHhCcc---------------------------cccc
Confidence            2579999999999999999999999999999999999999999998765                           6789


Q ss_pred             HHhhhCCCCCCCcCcceeccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccccc
Q 047842          323 ALCETLRLYPPVPYNHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKFTA  402 (465)
Q Consensus       323 ~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~p  402 (465)
                      +++|++|++|+++...|.+++ |+.++||.||||+.|+++.+++||||++| +||++|+||||.           ..|+|
T Consensus       287 ~~eE~lR~~pp~~~~~R~a~~-d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f-~dP~~F~PeR~~-----------~~~lp  353 (412)
T 4dnj_A          287 AFEEAVRFESPVQTFFRTTTR-DVELAGATIGEGEKVLMFLGSANRDPRRW-DDPDRYDITRKT-----------SGHVG  353 (412)
T ss_dssp             HHHHHHHHHCSBCEEEEEESS-CEEETTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTSCC-----------TTCCT
T ss_pred             ccceeeeecCCcccccccCCC-CeEECCccCCCCCeEEeehhhccCChhhC-CCccccCCCCCC-----------CCCCC
Confidence            999999999999987776666 56669999999999999999999999999 999999999983           24899


Q ss_pred             cCCCCCCCcChHHHHHHHHHHHHHHHhcc-EEEeecCCCccCcceEEeecCCCeeEEEEe
Q 047842          403 FHAGPRNCLGKDKALIQMKMVASAVIGNY-HVKVAKGHPVLPRKSIILNMKYGLKVQLSK  461 (465)
Q Consensus       403 Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  461 (465)
                      ||+|+|.|+|++||++|++++++.|+++| ++++.++  ..+..+.++++..+++|+++|
T Consensus       354 FG~G~r~CiG~~lA~~E~~~~l~~Ll~rf~~~~l~~~--~~~~~~~~~rg~~~LpV~~tP  411 (412)
T 4dnj_A          354 FGSGVHMCVGQLVARLEGEVVLAALARKVAAIEIAGP--LKRRFNNTLRGLESLPIQLTP  411 (412)
T ss_dssp             TCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEEEECSC--CEEEECSSBEEEEECEEEEEE
T ss_pred             cCCCCcCChhHHHHHHHHHHHHHHHHHHCCCCeECCC--CeeecCCCccCCcceeEEEEe
Confidence            99999999999999999999999999999 8999753  334445556666779999987


No 73 
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=100.00  E-value=1.7e-51  Score=390.71  Aligned_cols=351  Identities=15%  Similarity=0.122  Sum_probs=258.2

Q ss_pred             chhHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCchhhhhh--cccCCcccccCChhHHHH
Q 047842           44 YFHEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPDFRMIM--EPLGDGVLNADGDLWKIQ  121 (465)
Q Consensus        44 ~~~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~g~~w~~~  121 (465)
                      +++.++. ++++ +|||+++   ..|   .++|++++.++++++++  .|+..+.+....  ...+.+++..+|+.|+++
T Consensus        21 dp~~~~~-~lr~-~~pv~~~---~~g---~~~v~~~~~v~~~l~d~--~fs~~~~~~~~~~~~~~~~~l~~~dg~~h~~~   90 (394)
T 2wiy_A           21 NPYPWYR-RLQQ-DHPVHKL---EDG---TYLVSRYADVSHFAKLP--IMSVEPGWADAGPWAVASDTALGSDPPHHTVL   90 (394)
T ss_dssp             CCHHHHH-HHHH-HCSEEEC---TTS---CEEECCHHHHHHHTTST--TEECHHHHHTCGGGGGGGGSGGGCCTTHHHHH
T ss_pred             CccHHHH-HHHh-cCCeEEe---cCC---eEEEcCHHHHHHHHcCC--CccccccccccccchhcccccccCCchHHHHH
Confidence            4677787 7755 5899877   443   79999999999999763  444433222111  122467888999999999


Q ss_pred             HHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHHHHHHHHHHHHHHhCCCCCCCCCCCccchHHH
Q 047842          122 RKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVLKRFAFDNICMLVLGIDPNYLSVEFPQTVYAN  201 (465)
Q Consensus       122 R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~i~~~~~fG~~~~~~~~~~~~~~~~~  201 (465)
                      |+++.+.|+...++.+ .+.+++.+ +.+++.+.    .++++|+...+..++.++++..+||.+.+.      ...+.+
T Consensus        91 R~~~~~~fs~~~~~~~-~~~i~~~~-~~l~~~~~----~~~~~d~~~~~~~~~~~vi~~~~~G~~~~~------~~~~~~  158 (394)
T 2wiy_A           91 RRQTNKWFTPKLVDGW-VRTTRELV-GDLLDGVE----AGQVIEARRDLAVVPTHVTMARVLQLPEDD------ADAVME  158 (394)
T ss_dssp             HHHHHTTCSHHHHHHH-THHHHHHH-HHHHHTCC----TTCCEEHHHHHTHHHHHHHHHHHHTCCCCC------HHHHHH
T ss_pred             HHHHHhccCHHHHHHH-HHHHHHHH-HHHHHHHh----ccCCeeHHHHHHhhhHHHHHHHHcCCCHhH------HHHHHH
Confidence            9999999999999887 78888886 55655553    356799999999999999999999986431      222333


Q ss_pred             HHHHHHHHHHHhhhch--h-------HHHHHHHHhhhchHHHHHH--------hhh--hccCCchHHHHHHHHHHhhcch
Q 047842          202 AFNTMEQALLYRHIVP--K-------ICWKLQKWLQIGEEKKLSR--------AWK--LSIDSSTSFLRDTAFSFLGAGN  262 (465)
Q Consensus       202 ~~~~~~~~~~~~~~~p--~-------~~~~~~~~~~~~~~~~~~~--------~~~--~~~dl~~~~i~~~~~~~~~ag~  262 (465)
                      ....   ........|  .       ....+..++....+++...        ...  .-..++++++.++++.+++||+
T Consensus       159 ~~~~---~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~i~~rr~~~~~dll~~Ll~~~~~~~ls~~el~~~~~~l~~AG~  235 (394)
T 2wiy_A          159 AMFE---AMLMQSAEPADGDVDRAAVAFGYLSARVAEMLEDKRVNPGDGLADSLLDAARAGEITESEAIATILVFYAVGH  235 (394)
T ss_dssp             HHHH---HHGGGSSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHTTSSCHHHHHHHHHHHHHHTT
T ss_pred             HHHH---HHHhccCCccchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcHHHHHHHhhhcCCCCHHHHHHHHHHHHHhhh
Confidence            2211   111100111  0       0011111221111111100        000  0014799999999999999999


Q ss_pred             hhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhHHHHHhhhCCCCCCCcCcceecc
Q 047842          263 DTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYLHAALCETLRLYPPVPYNHKIAG  342 (465)
Q Consensus       263 ~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r~~~  342 (465)
                      |||+++++|++++|++||++|+++++|+.                           |+++||+|+||++||++...|.++
T Consensus       236 eTTa~~l~~~l~~L~~~P~~~~~l~~e~~---------------------------~l~a~i~E~LRl~pp~~~~~R~~~  288 (394)
T 2wiy_A          236 MAIGYLIASGIELFARRPEVFTAFRNDES---------------------------ARAAIINEMVRMDPPQLSFLRFPT  288 (394)
T ss_dssp             THHHHHHHHHHHHHHHCHHHHHHHHHCGG---------------------------GHHHHHHHHHHHSCSBCEEEEEES
T ss_pred             hhHHHHHHHHHHHHHHCHHHHHHHHhChH---------------------------hHHHHHHHHHhhCCCccCeeEEEC
Confidence            99999999999999999999999999875                           689999999999999986655554


Q ss_pred             CccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccccccCCCCCCCcChHHHHHHHHH
Q 047842          343 QADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKFTAFHAGPRNCLGKDKALIQMKM  422 (465)
Q Consensus       343 ~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~  422 (465)
                       +|+.++||.||||+.|+++.+++||||++| +||++|+|+||++.         ..++|||+|+|.|+|++||++|+++
T Consensus       289 -~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~-~dP~~F~p~R~~~~---------~~~l~FG~G~r~C~G~~lA~~e~~~  357 (394)
T 2wiy_A          289 -EDVEIGGVLIEAGSPIRFMIGAANRDPEVF-DDPDVFDHTRPPAA---------SRNLSFGLGPHSCAGQIISRAEATT  357 (394)
T ss_dssp             -SCEEETTEEECTTCCEEEEHHHHTTCTTTS-SSTTSCCTTCCGGG---------SCCSTTCCGGGSCTTHHHHHHHHHH
T ss_pred             -CCEEEcCeecCCCCEEEeChHhhcCCcccC-CCccccCCCCCCCC---------CCccCCCCCCCcCCcHHHHHHHHHH
Confidence             456669999999999999999999999999 99999999999742         2489999999999999999999999


Q ss_pred             HHHHHHhccE-EEeecCCCccCcceEEeecCCCeeEEE
Q 047842          423 VASAVIGNYH-VKVAKGHPVLPRKSIILNMKYGLKVQL  459 (465)
Q Consensus       423 ~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  459 (465)
                      +++.|+++|+ +++.++.++  ..+...+....++|++
T Consensus       358 ~l~~ll~~~~~~~l~~~~~~--~~~~~~~g~~~lpv~~  393 (394)
T 2wiy_A          358 VFAVLAERYERIELAEEPTV--AHNDFARRYRKLPIVL  393 (394)
T ss_dssp             HHHHHHHHCSCEEESSCCEE--CCCSSBCCEEECEEEE
T ss_pred             HHHHHHHhCCCceECCCCcc--cccccccCcceeeEEe
Confidence            9999999998 999764332  2233334444566665


No 74 
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=100.00  E-value=5.7e-52  Score=386.92  Aligned_cols=309  Identities=17%  Similarity=0.177  Sum_probs=235.5

Q ss_pred             hhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCch-hhhhhcccCCcccccCChhHHHHHHHhhhhcChhH
Q 047842           55 KKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPD-FRMIMEPLGDGVLNADGDLWKIQRKIIHSVMKHNK  133 (465)
Q Consensus        55 ~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~g~~w~~~R~~~~~~~~~~~  133 (465)
                      ++||||+++        .+++|++|+.+++++.++ ..|++++. +. ... .+.+++..+|+.|+++|+++++.|+...
T Consensus         2 r~~gpv~~~--------g~~vv~~~~~v~~vl~~~-~~f~~~~~~~~-~~~-~~~~l~~~~g~~~~~~R~~~~~~fs~~~   70 (343)
T 2rfb_A            2 RLNDPVHYD--------GAWHVYKYSDVKHVLMND-KIFSSNPGNRY-SNA-GGISFITMDNPEHKEFRDISAPYFLPSK   70 (343)
T ss_dssp             -CCCCEEET--------TEEEECSHHHHHHHHHCT-TTEESSCSSCC-C----CCGGGGCCHHHHHHHHHHHHHHHSHHH
T ss_pred             CCcCCeeee--------CeEEEcCHHHHHHHHhCh-hhcccCCcCCC-CCc-cccccccCCchHHHHHHHHhhhhcCHHH
Confidence            589998754        289999999999999875 45666542 21 112 3567888999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHH-HHHHHHHHHHHHhCCCCCCCCCCCccchHHHHHHHHHHHHHH
Q 047842          134 FESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVL-KRFAFDNICMLVLGIDPNYLSVEFPQTVYANAFNTMEQALLY  212 (465)
Q Consensus       134 l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~i~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (465)
                      ++.+ .+.+++.+ +.+++.+.       ++|+.+.+ ..+++++++++ ||.+.+.      ...+......+...   
T Consensus        71 l~~~-~~~i~~~~-~~l~~~l~-------~~d~~~~~~~~~~~~vi~~~-~G~~~~~------~~~~~~~~~~~~~~---  131 (343)
T 2rfb_A           71 INDY-KDFIEETS-NDLIKNID-------NKDIISEYAVRLPVNIISKI-LGIPDSD------MPLFKLWSDYIIGN---  131 (343)
T ss_dssp             HGGG-HHHHHHHH-HHHHTTCT-------TSCHHHHTTTHHHHHHHHHH-HTCCGGG------HHHHHHHHHHHHTS---
T ss_pred             HHHH-HHHHHHHH-HHHHHhcc-------ccCHHHHHhhhhhHHHHHHH-cCCCHHH------HHHHHHHHHHHhhc---
Confidence            9887 78888886 65655554       58998865 89999999998 9987542      12333333322211   


Q ss_pred             hhhchhH--------HHHHHHHhhhch-HHHHHHhhhh---ccCCchHHHHHHHHHHhhcchhhHHHHHHHHHHHHhcCc
Q 047842          213 RHIVPKI--------CWKLQKWLQIGE-EKKLSRAWKL---SIDSSTSFLRDTAFSFLGAGNDTISSGLVWFFWLVATHP  280 (465)
Q Consensus       213 ~~~~p~~--------~~~~~~~~~~~~-~~~~~~~~~~---~~dl~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p  280 (465)
                        ..|..        ...+..++.... .. +......   -..++++++.+++..+++||+|||+++++|++++|++||
T Consensus       132 --~~p~~~~~~~~~~~~~~~~~~~~~i~~d-l~~ll~~~~~~~~l~~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P  208 (343)
T 2rfb_A          132 --KRDENFNYVNNRMVSRLLEIFKSDSHGI-INVLAGSSLKNRKLTMDEKIKYIMLLIIGGNETTTNLIGNMIRVIDENP  208 (343)
T ss_dssp             --CCSSHHHHHHHHHHHHHHHHHHSCCSSH-HHHHHTCBCSSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCG
T ss_pred             --cCcchhhHHHHHHHHHHHHHHHHHHhcc-HHHHHhhhcCCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCH
Confidence              11211        001111111110 01 1111111   113799999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHhhhccccccCcccccccChhhhccchhHHHHHhhhCCCCCCC-cCcceeccCccccCCCeeeCCCCEE
Q 047842          281 SVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYLHAALCETLRLYPPV-PYNHKIAGQADILPSGHHIKKNQTV  359 (465)
Q Consensus       281 ~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~-~~~~r~~~~~~~~~~g~~Ip~gt~v  359 (465)
                      ++|+|+++|+                              +|||+|+||++|++ +...|.+. +|+.++||.|||||.|
T Consensus       209 ~~~~~l~~E~------------------------------~a~i~E~lRl~p~~~~~~~R~~~-~d~~~~g~~Ip~Gt~V  257 (343)
T 2rfb_A          209 DIIDDALKNR------------------------------SGFVEETLRYYSPIQFLPHRFAA-EDSYINNKKIKKGDQV  257 (343)
T ss_dssp             GGHHHHHHCH------------------------------HHHHHHHHHHSCSBCCBCCCEES-SCEEETTEEECTTCEE
T ss_pred             HHHHHHHcCc------------------------------HHHHHHHHhhCcccccccceEEC-CCeEECCEEECCCCEE
Confidence            9999999875                              46899999999999 85555554 4666799999999999


Q ss_pred             EEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccccccCCCCCCCcChHHHHHHHHHHHHHHHhccE-EEeecC
Q 047842          360 LISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKFTAFHAGPRNCLGKDKALIQMKMVASAVIGNYH-VKVAKG  438 (465)
Q Consensus       360 ~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~-~~~~~~  438 (465)
                      +++.+++||||++| +||++|+|||+            ..++|||.|+|.|+|++||++|++++++.|+++|+ +++.++
T Consensus       258 ~~~~~~~~rd~~~~-~dp~~F~PeR~------------~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~  324 (343)
T 2rfb_A          258 IVYLGSANRDETFF-DEPDLFKIGRR------------EMHLAFGIGIHMCLGAPLARLEASIALNDILNHFKRIKIDYK  324 (343)
T ss_dssp             EECHHHHTTCTTTS-SSTTSCCTTCS------------SCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCSCCCBCTT
T ss_pred             EEChhhhCCCcccC-CCccccCCCCC------------CCCccCCCCCccCCChHHHHHHHHHHHHHHHHhCCCceeCCC
Confidence            99999999999999 99999999994            14899999999999999999999999999999996 999874


Q ss_pred             CC
Q 047842          439 HP  440 (465)
Q Consensus       439 ~~  440 (465)
                      .+
T Consensus       325 ~~  326 (343)
T 2rfb_A          325 KS  326 (343)
T ss_dssp             TC
T ss_pred             cc
Confidence            43


No 75 
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=100.00  E-value=5.2e-52  Score=397.19  Aligned_cols=355  Identities=16%  Similarity=0.143  Sum_probs=254.0

Q ss_pred             chhHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCch-hh--------hhhcccCCcccccC
Q 047842           44 YFHEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPD-FR--------MIMEPLGDGVLNAD  114 (465)
Q Consensus        44 ~~~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~-~~--------~~~~~~~~~l~~~~  114 (465)
                      +++.+ . .+ ++|||++.+   .+|... ++|++++.++++++++  .+..... +.        ......+.+++..+
T Consensus        34 ~P~~~-~-~l-r~~gpv~~~---~~g~~~-~vv~~~~~v~~vL~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d  104 (416)
T 3p3o_A           34 FSWDS-P-EV-AEAREKSWI---ARTPLA-LLVLRYAEADQLARDK--RLISGFRGLVDMVGTPEGPVRDFMVDFLQSLD  104 (416)
T ss_dssp             CCTTS-H-HH-HHHHHHCSE---EECSSS-EEECSHHHHHHHHHCT--TEECSHHHHHHHHTCCSSHHHHHHHHSGGGCC
T ss_pred             CCchH-H-HH-HHhCCcccc---ccCCCc-eEEeCHHHHHHHHcCc--ccccCCccccccccccccchhhhhcCccccCC
Confidence            46666 6 55 479999888   665556 9999999999999875  2333221 10        01122345788999


Q ss_pred             ChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHH-HHHHHHHHHHHHHhCCCCCCCCCC
Q 047842          115 GDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDV-LKRFAFDNICMLVLGIDPNYLSVE  193 (465)
Q Consensus       115 g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~-~~~~~~~i~~~~~fG~~~~~~~~~  193 (465)
                      |++|+++|+++++.|+...++.+ .+.+++.+ +.+++.+ .    ++.+|+... ...++.++++.+ ||.+.+.    
T Consensus       105 g~~h~~~Rr~~~~~fs~~~l~~~-~~~i~~~~-~~ll~~l-~----~g~~d~~~~~~~~~~~~vi~~l-~G~~~~~----  172 (416)
T 3p3o_A          105 GADHRRLRGLATHPFTPRRITAV-QPFVRSTV-EQLIDKL-P----QGDFDFVQHFPHPLPALVMCQL-LGFPLED----  172 (416)
T ss_dssp             HHHHHHHHHTTCGGGSHHHHHHH-HHHHHHHH-HHHHHTC-C----SSSEEHHHHTTTHHHHHHHHHH-HTCCGGG----
T ss_pred             chHHHHHHHHHHHhhCHHHHHHH-HHHHHHHH-HHHHHhh-c----cCCccHHHHHHHHHHHHHHHHH-hCCCHHH----
Confidence            99999999999999999999998 78888887 6666655 2    234896555 456999999995 8986542    


Q ss_pred             CccchHHHHHHHHHHHHHHh------hhchhHHHHHHHHhhhchHHHHHH--------hhhh--ccCCchHHHHHHHHHH
Q 047842          194 FPQTVYANAFNTMEQALLYR------HIVPKICWKLQKWLQIGEEKKLSR--------AWKL--SIDSSTSFLRDTAFSF  257 (465)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~------~~~p~~~~~~~~~~~~~~~~~~~~--------~~~~--~~dl~~~~i~~~~~~~  257 (465)
                        ...+......+.......      .........+..++....+++.+.        ....  -..++++++..+++.+
T Consensus       173 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~rr~~~~~dll~~ll~~~~~~~ls~~el~~~~~~l  250 (416)
T 3p3o_A          173 --YDTVGRLSIETNLGLALSNDQDILVKVEQGLGRMFDYLVAAIEKRKVEPGDDLTSDIVRAFHDGVLDDYELRTLVATV  250 (416)
T ss_dssp             --HHHHHHHHHTTCGGGTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHTTSSCHHHHHHHHHHH
T ss_pred             --HHHHHHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHhhccCCCCHHHHHHHHHHH
Confidence              122222222111100000      000000111122222111111110        0000  0158999999999999


Q ss_pred             hhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhHHHHHhhhCCCCCCCcCc
Q 047842          258 LGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYLHAALCETLRLYPPVPYN  337 (465)
Q Consensus       258 ~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~  337 (465)
                      ++||+|||+++++|++++|++||++|+|+++|++                           |++++|+|+||++|+++..
T Consensus       251 ~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~~---------------------------~l~a~i~E~lRl~p~~~~~  303 (416)
T 3p3o_A          251 LVAGYETTNHQLALAMYDFAQHPDQWMKIKENPE---------------------------LAPQAVEEVLRWSPTLPVT  303 (416)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG---------------------------GHHHHHHHHHHHSCSCSSC
T ss_pred             HHhhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH---------------------------HHHHHHHHHHhhccccccC
Confidence            9999999999999999999999999999999876                           7899999999999999655


Q ss_pred             ceeccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccccccCCCCCCCcChHHHH
Q 047842          338 HKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKFTAFHAGPRNCLGKDKAL  417 (465)
Q Consensus       338 ~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~  417 (465)
                      ..|.+.+|+.++||.||||+.|+++.+++||||++| +||++|+|+||..          ..++|||+|+|.|+|++||+
T Consensus       304 ~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~-~dp~~F~p~R~~~----------~~~l~FG~G~r~C~G~~lA~  372 (416)
T 3p3o_A          304 ATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVF-ADADRFDITVKRE----------APSIAFGGGPHFCLGTALAR  372 (416)
T ss_dssp             CEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTC-TTTTSCCTTCCCS----------SCCCTTCCSTTSCTTHHHHH
T ss_pred             cceEeCCCeEECCEEECCCCEEEEChHHhcCChhcc-CCccccCCCCCCC----------CCeecCCCCCccCcCHHHHH
Confidence            555555677779999999999999999999999999 9999999999732          34899999999999999999


Q ss_pred             HHHHHHHHHHHhcc-EEEeecCCCccCcceEEeecCCCeeEEEEe
Q 047842          418 IQMKMVASAVIGNY-HVKVAKGHPVLPRKSIILNMKYGLKVQLSK  461 (465)
Q Consensus       418 ~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  461 (465)
                      +|++++++.|+++| ++++.++..+  ..+...+....++|++.|
T Consensus       373 ~e~~~~l~~ll~~f~~~~l~~~~~~--~~~~~~~g~~~lpv~~~p  415 (416)
T 3p3o_A          373 LELTEAVAALATRLDPPQIAGEITW--RHELGVAGPDALPLRFGA  415 (416)
T ss_dssp             HHHHHHHHHHHHHSCCEEECSCCEE--CCCTTCCCEEECEEEESC
T ss_pred             HHHHHHHHHHHHhCCccccCCCCce--ecCCCccCcceeeEEEec
Confidence            99999999999999 5888754433  222222333357777653


No 76 
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=100.00  E-value=3e-44  Score=341.79  Aligned_cols=352  Identities=14%  Similarity=0.120  Sum_probs=238.2

Q ss_pred             chhHHHhHHHHhhcCc-eEEEecccccccceEEecChhhHHHhHhcCCCCCCCCchhhhhh--cccCCcccccCChhHHH
Q 047842           44 YFHEFLAHDVLKKNRG-TFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPDFRMIM--EPLGDGVLNADGDLWKI  120 (465)
Q Consensus        44 ~~~~~~~~~~~~kyg~-v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~g~~w~~  120 (465)
                      ++|..++ +++++.++ ++..  |.  +...++|++++.|+++++++ ..|++........  ......+..+|+++|++
T Consensus        38 ~~~~~~~-~lr~~~~~~~~~~--~~--~gg~W~vtr~~dv~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~D~p~H~r  111 (417)
T 4dxy_A           38 GYHEAWK-KVQHPGIPDLIWT--PF--TGGHWIATNGDTVKEVYSDP-TRFSSEVIFLPKEAGEKAQMVPTKMDPPEHTP  111 (417)
T ss_dssp             CHHHHHH-HHSCTTCCSEEEE--SS--TTSEEEECSHHHHHHHHTCT-TTEESSCCSSSTTSSCSSCTTTTTCCTTTHHH
T ss_pred             ChHHHHH-HHHhhCCCCEEec--CC--CCCEEEECCHHHHHHHHcCc-hhccCCCcccccccccccccCcccCCcHHHHH
Confidence            5777777 77665443 4433  22  22579999999999999875 5565443221111  12223466789999999


Q ss_pred             HHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHH-HHHHHHHHHHHHhCCCCCCCCCCCccchH
Q 047842          121 QRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVL-KRFAFDNICMLVLGIDPNYLSVEFPQTVY  199 (465)
Q Consensus       121 ~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~i~~~~~fG~~~~~~~~~~~~~~~  199 (465)
                      +|+++++.|+.+.++.+ ++.+++.+ +.+++.+..    ++.+|+...+ ..++..+++.+ +|.....      ...+
T Consensus       112 ~Rrll~~~Fs~~~l~~~-~~~i~~~~-~~lld~l~~----~g~~D~v~~~a~~l~~~vi~~l-lg~~~~d------~~~~  178 (417)
T 4dxy_A          112 YRKALDKGLNLAKIRKV-EDKVREVA-SSLIDSFAA----RGECDFAAEYAELFPVHVFMAL-ADLPLED------IPVL  178 (417)
T ss_dssp             HHHHHHHHHCHHHHHTT-HHHHHHHH-HHHHHHHHT----TSEEEHHHHTTTTHHHHHHHHH-TTCCGGG------HHHH
T ss_pred             HHHHhhhhcCHHHHHHH-HHHHHHHH-HHHHHHhhh----cCCeeeHHHHHhhhHHHHHHHH-cCCCHHH------HHHH
Confidence            99999999999999998 88888887 555555542    3457765554 55677777765 7875432      2223


Q ss_pred             HHHHHHHHHHHHHhhhchh--------HHHHHHHHhhhchHHHHHH--------hh---hhccCCchHHHHHHHHHHhhc
Q 047842          200 ANAFNTMEQALLYRHIVPK--------ICWKLQKWLQIGEEKKLSR--------AW---KLSIDSSTSFLRDTAFSFLGA  260 (465)
Q Consensus       200 ~~~~~~~~~~~~~~~~~p~--------~~~~~~~~~~~~~~~~~~~--------~~---~~~~dl~~~~i~~~~~~~~~a  260 (465)
                      ......+...   ....+.        ....+..++....+++...        ..   ..-..++++++..++..+++|
T Consensus       179 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~~rr~~~~ddl~s~L~~~~~~~~~~~~~e~~~~~~~ll~A  255 (417)
T 4dxy_A          179 SEYARQMTRP---EGNTPEEMATDLEAGNNGFYAYVDPIIRARVGGDGDDLITLMVNSEINGERIAHDKAQGLISLLLLG  255 (417)
T ss_dssp             HHHHHHHHSC---CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHTCEETTEECCHHHHHHHHHHHHHH
T ss_pred             Hhhhhhhccc---cccChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhccccccCCccchhHHHHHHHHHHhh
Confidence            3322222110   000010        0011111221111111100        00   000136899999999999999


Q ss_pred             chhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhHHHHHhhhCCCCCCCcCccee
Q 047842          261 GNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYLHAALCETLRLYPPVPYNHKI  340 (465)
Q Consensus       261 g~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r~  340 (465)
                      |+|||+++++|++++|++||++++++++|.. .+                          ..++.|.+| +++.+...|.
T Consensus       256 G~eTTa~~l~~~~~~L~~~P~~~~~l~~e~~-~~--------------------------~~avee~~~-~~~~~~~~R~  307 (417)
T 4dxy_A          256 GLDTVVNFLSFFMIHLARHPELVAELRSDPL-KL--------------------------MRGAEEMFR-RFPVVSEARM  307 (417)
T ss_dssp             TTHHHHHHHHHHHHHHHTCHHHHHHHHHCHH-HH--------------------------HHTHHHHHH-HSCCBEEEEE
T ss_pred             cccchhhHHHHHHHHHHhCchhhhhhccCcc-cc--------------------------ccceeeeec-cccccccccc
Confidence            9999999999999999999999999999987 33                          222334333 4444455555


Q ss_pred             ccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccccccCCCCCCCcChHHHHHHH
Q 047842          341 AGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKFTAFHAGPRNCLGKDKALIQM  420 (465)
Q Consensus       341 ~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~  420 (465)
                      +++ |+.++|+.||||+.|+++.+++||||++| +||++|+|+|+           +..++|||+|+|.|+|++||++|+
T Consensus       308 a~~-d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f-~dP~~FdpeR~-----------~~~~l~FG~G~r~ClG~~LA~~E~  374 (417)
T 4dxy_A          308 VAK-DQEYKGVFLKRGDMILLPTALHGLDDAAN-PEPWKLDFSRR-----------SISHSTFGGGPHRCAGMHLARMEV  374 (417)
T ss_dssp             ECS-CEEETTEEECTTCEEEEETHHHHTCTTTS-SSTTSCCTTCS-----------CCCCCTTCCGGGSCTTHHHHHHHH
T ss_pred             ccc-ceEecCccccCCCEEEEeehhhcCChhhC-CCccccCCCCC-----------CCCCCCcCCCcccCccHHHHHHHH
Confidence            544 66679999999999999999999999999 99999999994           235899999999999999999999


Q ss_pred             HHHHHHHHhcc-EEEeecCCCccCcceEEeecCCCeeEEE
Q 047842          421 KMVASAVIGNY-HVKVAKGHPVLPRKSIILNMKYGLKVQL  459 (465)
Q Consensus       421 ~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  459 (465)
                      +++++.||++| ++++.+++..... +...+....++|++
T Consensus       375 ~i~l~~Ll~rfp~~~l~~~~~~~~~-~~~~~g~~~LPv~~  413 (417)
T 4dxy_A          375 IVTLEEWLKRIPEFSFKEGETPIYH-SGIVAAVENVPLVW  413 (417)
T ss_dssp             HHHHHHHHHHCSSCEECTTCCCEEE-CSSBCEEECCEEEC
T ss_pred             HHHHHHHHHhCCCceeCCCCCeeec-CCcccCceeeeEEe
Confidence            99999999999 9999866443222 22233334577765


No 77 
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00  E-value=7.1e-47  Score=351.85  Aligned_cols=327  Identities=14%  Similarity=0.127  Sum_probs=217.6

Q ss_pred             CCCcccchHHHhh--cccchhHHHhHHHHhhcCceEEEecccccccceEEecChhhHHHhHhcCCCCCCCCch-h-hh--
Q 047842           28 NWPVLGMLPGLLA--NTWYFHEFLAHDVLKKNRGTFEFTGPWFAQMDLIITSDPMNVHYISSKNFSNYPKGPD-F-RM--  101 (465)
Q Consensus        28 ~~p~~G~~~~~~~--~~~~~~~~~~~~~~~kyg~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~~~~~~~~~~~-~-~~--  101 (465)
                      ++|++|+...+..  ...+++.++. +++++  ||+++   .   .+.+++++++.+++++.+  ..|++.+. + ..  
T Consensus        42 ~~P~~G~~~~~~~~~~~~dp~~~~~-~lr~~--pV~~~---~---~~~~vv~~~~~v~~vl~d--~~f~~~~~~~~~~~~  110 (381)
T 2yjn_B           42 GYGSNGDPYPMLLCGHDDDPQRRYR-SMRES--GVRRS---R---TETWVVADHATARQVLDD--PAFTRATGRTPEWMR  110 (381)
T ss_dssp             HHHHHTCHHHHHHHTCCSCCHHHHH-HHHHH--CEEEC---S---SSCEEECSHHHHHHHHHC--SSEESSCCCCCHHHH
T ss_pred             cccccCCchhhcCchhccCchHHHH-HHHhC--CceeC---C---CCEEEEcCHHHHHHHHcC--CCcCCCccccccccc
Confidence            5799998776532  1246788888 88865  98876   3   468999999999999986  35655432 1 01  


Q ss_pred             ----hhcccCCcccccCChhHHHHHHHhhhhcChhHHHHHHHHHHHHHHhhchhhhhhhhcccCccccHHHHH-HHHHHH
Q 047842          102 ----IMEPLGDGVLNADGDLWKIQRKIIHSVMKHNKFESALEKVAHQKMETGLIPVLDHASELGTVVDLQDVL-KRFAFD  176 (465)
Q Consensus       102 ----~~~~~~~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~  176 (465)
                          .....+.+++..||++|       .+.|+  .     ++.+++.+ +.+++.+.      +.+|+...+ ..++++
T Consensus       111 ~~~~~~~~~~~~l~~~dg~~H-------~~~Ft--~-----~~~i~~~~-~~ll~~~~------g~~Dl~~~~a~~l~~~  169 (381)
T 2yjn_B          111 AAGAPPAEWAQPFRDVHAASW-------EGEVP--D-----VGELAESF-AGLLPGAG------ARLDLVGDFAWQVPVQ  169 (381)
T ss_dssp             HHTCCHHHHTHHHHHHHHCCC-------CSCCC--C-----CSCHHHHT-STTSCC------------CCCCCCTHHHHH
T ss_pred             ccccccchhhhhhhhCCchhh-------hhccC--C-----hHHHHHHH-HHHHHhcc------CcchHHHHHHHHHHHH
Confidence                01112456778899999       57777  1     34556665 55555553      358888665 699999


Q ss_pred             HHHHHHhCCCCCCCCCCCccchHHHHHHHHHHHHHHhhhchhHHHHHHHHhhhchHHHHHHhhhhccCCchHHHHHHHHH
Q 047842          177 NICMLVLGIDPNYLSVEFPQTVYANAFNTMEQALLYRHIVPKICWKLQKWLQIGEEKKLSRAWKLSIDSSTSFLRDTAFS  256 (465)
Q Consensus       177 i~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~i~~~~~~  256 (465)
                      +++++ ||.+.+..       .+..   .+....... ..+.            ..+...+...   ++.+    ++++.
T Consensus       170 vi~~l-~G~~~~~~-------~~~~---~~~~~~~~~-~~~~------------~~~~~~~~~~---~l~~----~~~~~  218 (381)
T 2yjn_B          170 GMTAV-LGAAGVLR-------GAAW---DARVSLDAQ-LSPQ------------QLAVTEAAVA---ALPA----DPALR  218 (381)
T ss_dssp             HHHTC------CCH-------HHHH---HHTTHHHHT-TSCC------------CHHHHHHHHH---HCC------CHHH
T ss_pred             HHHHH-cCCCHHHH-------HHHH---HHHHhccCC-CCHH------------HHHHHHHHHH---HHHH----HHHHH
Confidence            99995 99876421       2221   111110000 0000            0011111111   1211    77899


Q ss_pred             HhhcchhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhccccccCcccccccChhhhccchhHHHHHhhhCCCCCCCcC
Q 047842          257 FLGAGNDTISSGLVWFFWLVATHPSVENKILKEIKATIVMHKKEEDGERRFFFNTKQANNLVYLHAALCETLRLYPPVPY  336 (465)
Q Consensus       257 ~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~  336 (465)
                      +++||+|||+++++|++++|++||++++++++|++                           |++++|+|+||++|+++.
T Consensus       219 ll~aG~eTt~~~l~~~l~~L~~~P~~~~~l~~e~~---------------------------~l~~~i~E~LR~~pp~~~  271 (381)
T 2yjn_B          219 ALFAGAEMTANTVVDAVLAVSAEPGLAERIADDPA---------------------------AAQRTVAEVLRLHPALHL  271 (381)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCC-----------------------------HHHHHHHHHHSCSCSE
T ss_pred             HHHHhhhHHHHHHHHHHHHHHHCHHHHHHHhhCHH---------------------------HHHHHhCeeeeecCCCcc
Confidence            99999999999999999999999999999999875                           789999999999999997


Q ss_pred             cceeccCccccCCCeeeCCCCEEEEeecccccCCCCcCCCCCCcCCCCCCCCCCcccccCCccccccCCCCCCCcChHHH
Q 047842          337 NHKIAGQADILPSGHHIKKNQTVLISYYAMGRMEEIWGNDCLEFKPERWISEKGCIVHVPTYKFTAFHAGPRNCLGKDKA  416 (465)
Q Consensus       337 ~~r~~~~~~~~~~g~~Ip~gt~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A  416 (465)
                      ..|.+. +|+.++|+.||||+.|+++.+++||||++| +||++|+|+||++          ..++|||+| |.|+|+++|
T Consensus       272 ~~R~a~-~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~-~dp~~F~p~R~~~----------~~~l~FG~G-h~C~G~~lA  338 (381)
T 2yjn_B          272 ERRTAT-AEVRLGEHVIGEGEEVVVVVAAANRDPEVF-AEPDRLDVDRPDA----------DRALSAHRG-HPGRLEELV  338 (381)
T ss_dssp             EEEEES-SCEESSSCEECTTCEEEEEHHHHTTCTTTS-SSTTSCCSSCSCC----------CCCCC-----CCSSHHHHH
T ss_pred             eeEEEC-CCeEECCEEECCCCEEEeCHHHHcCCcccC-CCccccCCCCCCC----------CCccCCCCC-CCCchHHHH
Confidence            555554 567779999999999999999999999999 9999999999963          348999999 999999999


Q ss_pred             HHHHHHHHHHHHhcc-EEEeecCCCccCcceEEeecCCCeeEE
Q 047842          417 LIQMKMVASAVIGNY-HVKVAKGHPVLPRKSIILNMKYGLKVQ  458 (465)
Q Consensus       417 ~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~  458 (465)
                      ++|++++++.|+++| ++++.++. ..+..+.+.+...+++|+
T Consensus       339 ~~e~~~~l~~ll~~~p~~~l~~~~-~~~~~~~~~r~~~~LpV~  380 (381)
T 2yjn_B          339 TALATAALRAAAKALPGLTPSGPV-VRRRRSPVLRGTNRCPVE  380 (381)
T ss_dssp             HHHHHHHHHHTTTTCCC-----CC-EECTTCSSSCCEEECCCC
T ss_pred             HHHHHHHHHHHHHhCCCcEECCCC-cccccCcccCCCccceee
Confidence            999999999999999 99997654 333333444444444443


No 78 
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=46.98  E-value=16  Score=21.33  Aligned_cols=10  Identities=10%  Similarity=0.023  Sum_probs=4.8

Q ss_pred             HHHHHhhcCC
Q 047842           13 IVLHWSWSDR   22 (465)
Q Consensus        13 ~~~~~~~~~r   22 (465)
                      .+.+++|+||
T Consensus        29 ~~~~~~~RRr   38 (44)
T 2ks1_B           29 LGIGLFMRRR   38 (44)
T ss_dssp             HHHHHHHHTT
T ss_pred             HHHHHHhhhh
Confidence            3344455554


No 79 
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=44.43  E-value=19  Score=21.01  Aligned_cols=9  Identities=0%  Similarity=-0.134  Sum_probs=4.3

Q ss_pred             HHHHhhcCC
Q 047842           14 VLHWSWSDR   22 (465)
Q Consensus        14 ~~~~~~~~r   22 (465)
                      +.+++|+||
T Consensus        29 ~~~~~~RRR   37 (44)
T 2l2t_A           29 TFAVYVRRK   37 (44)
T ss_dssp             HHHHHHHTT
T ss_pred             HHHHHhhhh
Confidence            334455554


No 80 
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=37.59  E-value=33  Score=19.21  Aligned_cols=10  Identities=10%  Similarity=-0.011  Sum_probs=4.9

Q ss_pred             HHHHHhhcCC
Q 047842           13 IVLHWSWSDR   22 (465)
Q Consensus        13 ~~~~~~~~~r   22 (465)
                      .+.+++|+||
T Consensus        29 ~l~~~~~rrr   38 (38)
T 2k1k_A           29 GILVFRSRRA   38 (38)
T ss_dssp             HHHHHHHCCC
T ss_pred             HHHHHHeecC
Confidence            3344556554


No 81 
>3j1r_A Archaeal adhesion filament core; helical polymer, flagellar filament, cell adhesion, structur protein; 7.50A {Ignicoccus hospitalis}
Probab=35.50  E-value=43  Score=16.60  Aligned_cols=12  Identities=33%  Similarity=0.769  Sum_probs=5.5

Q ss_pred             HHHHHHHHHHhh
Q 047842            8 ISFLIIVLHWSW   19 (465)
Q Consensus         8 ~~~~~~~~~~~~   19 (465)
                      +++...++.+.|
T Consensus        13 iav~aaVllylW   24 (26)
T 3j1r_A           13 IAVAAAVLLYTW   24 (26)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            334444455555


No 82 
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=34.05  E-value=54  Score=20.05  Aligned_cols=16  Identities=6%  Similarity=0.264  Sum_probs=7.1

Q ss_pred             HHHHHHHHH--hhcCCCC
Q 047842            9 SFLIIVLHW--SWSDRNS   24 (465)
Q Consensus         9 ~~~~~~~~~--~~~~r~P   24 (465)
                      +++++++|.  +++|++|
T Consensus        27 ~li~~~LwK~GFFkR~~~   44 (54)
T 2knc_A           27 TILVLAMWKVGFFKRNRP   44 (54)
T ss_dssp             HHHHHHHHHHHHTTTTCC
T ss_pred             HHHHHHHHHcCcccCCCC
Confidence            344444554  4444433


No 83 
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=33.54  E-value=51  Score=18.95  Aligned_cols=9  Identities=11%  Similarity=0.409  Sum_probs=3.9

Q ss_pred             HHHHHHHHH
Q 047842            9 SFLIIVLHW   17 (465)
Q Consensus         9 ~~~~~~~~~   17 (465)
                      +++++++|.
T Consensus        25 ~li~~~LwK   33 (42)
T 2k1a_A           25 TILVLAMWK   33 (42)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            334444444


No 84 
>3bej_E Nuclear receptor coactivator 1; FXR, BAR, NR1H4, bIle acid receptor, NHR, alternative splicing, DNA-binding, metal-binding nucleus, repressor; HET: MUF; 1.90A {Homo sapiens} PDB: 1fm9_B* 1k74_B* 1fm6_B* 1p8d_C* 1rdt_B* 1nrl_C* 3ipq_B* 3ips_C* 3ipu_C* 4dm6_E* 4dm8_C* 3kmg_B* 2hfp_B* 1k7l_B*
Probab=23.19  E-value=78  Score=15.50  Aligned_cols=21  Identities=10%  Similarity=0.311  Sum_probs=18.1

Q ss_pred             CcChHHHHHHHHHHHHHHHhc
Q 047842          410 CLGKDKALIQMKMVASAVIGN  430 (465)
Q Consensus       410 C~G~~~A~~e~~~~l~~ll~~  430 (465)
                      ||..+-...|---++.+||++
T Consensus         1 cpss~~sL~EkHkILHrLLQ~   21 (26)
T 3bej_E            1 CPSSHSSLTERHKILHRLLQE   21 (26)
T ss_pred             CCCchhhHHHHHHHHHHHHHc
Confidence            888888888988899999886


No 85 
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.88  E-value=73  Score=22.26  Aligned_cols=52  Identities=8%  Similarity=-0.016  Sum_probs=36.3

Q ss_pred             cccchHHHhhcccchhHHHhHHHHhhcC-ceEEEecccccccceEEecChhhHHHhHhc
Q 047842           31 VLGMLPGLLANTWYFHEFLAHDVLKKNR-GTFEFTGPWFAQMDLIITSDPMNVHYISSK   88 (465)
Q Consensus        31 ~~G~~~~~~~~~~~~~~~~~~~~~~kyg-~v~~~~~~~~~~~~~vvv~~p~~v~~i~~~   88 (465)
                      +++|+..-. +...+..-+. ++..+|| +|..+.    +|.-.|...+.+.+...++.
T Consensus        13 YV~NL~~~~-~~~~lk~~L~-~lF~~yGG~Vl~Vt----gG~AfV~F~~~esA~~A~~~   65 (96)
T 2diu_A           13 YVYNLPANK-DGKSVSNRLR-RLSDNCGGKVLSIT----GCSAILRFINQDSAERAQKR   65 (96)
T ss_dssp             EEESCCTTS-CHHHHHHHHH-HHHHTTTCCEEECC----TTCEEEEESSHHHHHHHHHH
T ss_pred             EEeCCCCcC-CHHHHHHHHH-HHHHHcCCeeEEEe----cCEEEEEECCHHHHHHHHHH
Confidence            477777443 2223344566 7888995 988884    37788999999988887764


No 86 
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=20.80  E-value=1.1e+02  Score=18.68  Aligned_cols=14  Identities=21%  Similarity=0.261  Sum_probs=6.3

Q ss_pred             HHHHHHHHH--hhcCC
Q 047842            9 SFLIIVLHW--SWSDR   22 (465)
Q Consensus         9 ~~~~~~~~~--~~~~r   22 (465)
                      +++++++|.  +++|+
T Consensus        24 ~Lii~~LwK~GFFKR~   39 (54)
T 2l8s_A           24 MLLILALWKIGFFKRP   39 (54)
T ss_dssp             HHHHHHHHHHHHTTSC
T ss_pred             HHHHHHHHHcCcccCC
Confidence            344444554  44444


No 87 
>2l6w_A Beta-type platelet-derived growth factor receptor; transmembrane helix, receptor tyrosine kinase, heptad repeat membrane protein; NMR {Homo sapiens}
Probab=24.32  E-value=24  Score=19.74  Aligned_cols=13  Identities=23%  Similarity=0.644  Sum_probs=6.6

Q ss_pred             HHHHHHHHhhcCC
Q 047842           10 FLIIVLHWSWSDR   22 (465)
Q Consensus        10 ~~~~~~~~~~~~r   22 (465)
                      +.++++.+.|.++
T Consensus        23 isLIiLi~~w~qK   35 (39)
T 2l6w_A           23 ISLIILIMLWQKK   35 (39)
Confidence            3334455566654


Done!