Query 047844
Match_columns 264
No_of_seqs 174 out of 3090
Neff 10.6
Searched_HMMs 29240
Date Mon Mar 25 05:50:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047844.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047844hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2f8y_A Notch homolog 1, transl 100.0 3.5E-37 1.2E-41 240.2 22.6 192 2-221 26-217 (223)
2 2rfa_A Transient receptor pote 100.0 3.1E-37 1.1E-41 241.9 20.5 205 2-221 4-223 (232)
3 1oy3_D Transcription factor in 100.0 2E-37 6.7E-42 249.7 19.9 208 2-221 10-251 (282)
4 1yyh_A HN1;, notch 1, ankyrin 100.0 4E-37 1.4E-41 244.6 20.1 189 2-218 58-246 (253)
5 3aji_A 26S proteasome non-ATPa 100.0 2.1E-36 7.2E-41 237.0 23.5 191 2-221 7-198 (231)
6 2dzn_A Probable 26S proteasome 100.0 2.7E-36 9.2E-41 235.8 22.4 193 2-220 3-200 (228)
7 2xai_A ASB-9, ankyrin repeat a 100.0 3E-36 1E-40 240.7 22.3 188 2-220 4-191 (261)
8 3hra_A Ankyrin repeat family p 100.0 3.1E-36 1E-40 231.1 20.7 188 2-218 6-201 (201)
9 3aji_A 26S proteasome non-ATPa 100.0 1.3E-36 4.4E-41 238.2 18.8 189 2-219 41-229 (231)
10 1ikn_D Protein (I-kappa-B-alph 100.0 4.7E-37 1.6E-41 241.6 16.0 198 2-222 9-211 (236)
11 1k1a_A B-cell lymphoma 3-encod 100.0 9.8E-36 3.3E-40 234.5 23.5 195 2-221 10-209 (241)
12 1yyh_A HN1;, notch 1, ankyrin 100.0 1.7E-36 5.9E-41 241.0 18.7 192 2-221 11-216 (253)
13 3b7b_A Euchromatic histone-lys 100.0 1.2E-35 4E-40 233.6 22.3 191 2-221 12-203 (237)
14 3d9h_A CDNA FLJ77766, highly s 100.0 2.6E-35 8.9E-40 238.1 22.5 188 2-220 60-247 (285)
15 4b93_B Ankyrin repeat domain-c 100.0 4.6E-36 1.6E-40 240.4 17.1 191 3-221 13-211 (269)
16 1k1a_A B-cell lymphoma 3-encod 100.0 5.6E-36 1.9E-40 235.8 16.2 189 2-218 47-239 (241)
17 2etb_A Transient receptor pote 100.0 4.3E-36 1.5E-40 238.9 15.4 204 2-220 3-246 (256)
18 4gpm_A Engineered protein OR26 100.0 1.1E-35 3.8E-40 221.6 16.2 155 37-220 7-161 (169)
19 3ljn_A Hypothetical protein; a 100.0 1.7E-35 5.9E-40 247.1 19.2 205 2-220 21-269 (364)
20 3kea_A K1L; tropism, ANK repea 100.0 6.8E-36 2.3E-40 241.6 15.9 193 2-226 32-226 (285)
21 4gpm_A Engineered protein OR26 100.0 4E-35 1.4E-39 218.6 18.2 125 37-190 40-164 (169)
22 2pnn_A Transient receptor pote 100.0 1.3E-35 4.4E-40 238.4 15.8 205 2-220 14-258 (273)
23 3b7b_A Euchromatic histone-lys 100.0 7.4E-35 2.5E-39 229.0 19.8 187 2-216 45-231 (237)
24 3utm_A Tankyrase-1; tankyrase, 100.0 2.1E-34 7.3E-39 238.7 22.7 209 2-222 59-307 (351)
25 4b93_B Ankyrin repeat domain-c 100.0 1E-35 3.4E-40 238.4 12.4 182 2-214 53-235 (269)
26 2xai_A ASB-9, ankyrin repeat a 100.0 3.9E-35 1.3E-39 234.2 15.5 186 2-220 37-222 (261)
27 1s70_B 130 kDa myosin-binding 100.0 2.4E-34 8.1E-39 233.8 20.2 190 2-219 41-256 (299)
28 1wdy_A 2-5A-dependent ribonucl 100.0 9E-34 3.1E-38 228.2 22.5 192 2-222 73-280 (285)
29 3d9h_A CDNA FLJ77766, highly s 100.0 3.1E-34 1.1E-38 231.8 19.1 183 2-217 93-275 (285)
30 2dzn_A Probable 26S proteasome 100.0 2.9E-34 9.8E-39 224.3 18.3 183 2-216 37-226 (228)
31 2fo1_E LIN-12 protein; beta-ba 100.0 2.5E-34 8.4E-39 240.9 18.9 198 2-220 167-371 (373)
32 1n11_A Ankyrin; clathrin, BAND 100.0 1.5E-33 5E-38 240.9 23.7 207 2-220 15-237 (437)
33 1n11_A Ankyrin; clathrin, BAND 100.0 1.1E-33 3.6E-38 241.7 21.9 207 3-221 148-370 (437)
34 1wdy_A 2-5A-dependent ribonucl 100.0 3.1E-33 1.1E-37 225.1 23.3 206 2-219 6-244 (285)
35 3jxi_A Vanilloid receptor-rela 100.0 1.3E-34 4.6E-39 230.8 15.1 206 3-220 7-250 (260)
36 3eu9_A Huntingtin-interacting 100.0 1.5E-33 5.1E-38 221.5 20.2 207 2-219 10-234 (240)
37 1oy3_D Transcription factor in 100.0 4.7E-34 1.6E-38 229.9 16.7 178 2-207 46-270 (282)
38 2fo1_E LIN-12 protein; beta-ba 100.0 1E-33 3.5E-38 237.2 19.1 195 2-221 126-339 (373)
39 2rfm_A Putative ankyrin repeat 100.0 2.1E-33 7.3E-38 213.9 18.5 160 30-218 31-190 (192)
40 4hbd_A KN motif and ankyrin re 100.0 5.4E-34 1.9E-38 229.3 15.7 188 3-218 78-273 (276)
41 4g8k_A 2-5A-dependent ribonucl 100.0 2.8E-33 9.7E-38 231.3 20.1 209 2-221 26-299 (337)
42 2f8y_A Notch homolog 1, transl 100.0 3.4E-33 1.2E-37 217.5 19.2 183 11-221 1-184 (223)
43 3eu9_A Huntingtin-interacting 100.0 7.2E-33 2.5E-37 217.6 20.7 179 30-220 5-202 (240)
44 3utm_A Tankyrase-1; tankyrase, 100.0 1.3E-32 4.5E-37 227.9 23.0 192 2-221 25-273 (351)
45 3v30_A DNA-binding protein rfx 100.0 5E-33 1.7E-37 208.1 14.7 159 34-220 2-160 (172)
46 3v31_A Ankyrin repeat family A 100.0 2.9E-32 9.8E-37 203.0 17.9 158 33-219 2-159 (167)
47 3v30_A DNA-binding protein rfx 100.0 5.1E-32 1.7E-36 202.7 18.5 162 3-198 4-171 (172)
48 2y1l_E Darpin-8.4; hydrolase-i 100.0 3.6E-32 1.2E-36 203.0 17.4 160 30-218 10-169 (169)
49 1s70_B 130 kDa myosin-binding 100.0 3.8E-32 1.3E-36 220.7 17.3 202 2-216 74-285 (299)
50 1ihb_A P18-INK4C(INK6), cyclin 100.0 2.5E-32 8.5E-37 202.3 14.7 157 33-219 4-161 (162)
51 1ihb_A P18-INK4C(INK6), cyclin 100.0 5.4E-32 1.8E-36 200.4 14.7 154 2-187 6-162 (162)
52 3twr_A Tankyrase-2; ankyrin re 100.0 4.5E-32 1.5E-36 201.6 13.7 161 30-219 4-164 (165)
53 1awc_B Protein (GA binding pro 100.0 2.1E-31 7.1E-36 195.6 16.9 151 34-214 2-152 (153)
54 3f6q_A Integrin-linked protein 100.0 2E-31 7E-36 200.7 16.8 162 32-221 3-164 (179)
55 3kea_A K1L; tropism, ANK repea 100.0 2.8E-32 9.7E-37 220.3 12.3 182 2-220 63-246 (285)
56 3v31_A Ankyrin repeat family A 100.0 2.5E-31 8.6E-36 197.9 15.9 158 2-188 4-161 (167)
57 2rfa_A Transient receptor pote 100.0 1E-30 3.6E-35 204.7 20.2 165 33-221 2-184 (232)
58 2y1l_E Darpin-8.4; hydrolase-i 100.0 4.9E-31 1.7E-35 196.8 17.0 155 2-185 15-169 (169)
59 4g8k_A 2-5A-dependent ribonucl 100.0 1E-30 3.5E-35 216.0 20.4 188 2-223 126-329 (337)
60 3ljn_A Hypothetical protein; a 100.0 6.3E-32 2.2E-36 225.5 12.8 194 2-219 85-313 (364)
61 1ikn_D Protein (I-kappa-B-alph 100.0 1.1E-31 3.9E-36 210.9 13.4 177 2-206 46-230 (236)
62 2rfm_A Putative ankyrin repeat 100.0 5.2E-31 1.8E-35 200.7 16.5 155 2-185 36-190 (192)
63 3f6q_A Integrin-linked protein 100.0 4.3E-31 1.5E-35 198.9 15.4 165 2-195 6-171 (179)
64 1bd8_A P19INK4D CDK4/6 inhibit 100.0 9E-31 3.1E-35 192.7 15.6 154 34-217 2-155 (156)
65 1sw6_A Regulatory protein SWI6 100.0 2.7E-31 9.4E-36 218.6 11.0 179 5-220 101-308 (327)
66 1awc_B Protein (GA binding pro 100.0 4.3E-30 1.5E-34 188.5 16.2 150 2-181 3-152 (153)
67 3twr_A Tankyrase-2; ankyrin re 100.0 1.3E-30 4.5E-35 193.7 13.3 155 2-186 9-164 (165)
68 3hra_A Ankyrin repeat family p 100.0 2.1E-29 7.4E-34 192.9 19.3 163 31-221 2-171 (201)
69 1bd8_A P19INK4D CDK4/6 inhibit 100.0 9.2E-30 3.1E-34 187.3 15.6 152 2-184 3-155 (156)
70 2vge_A RELA-associated inhibit 100.0 4.5E-33 1.5E-37 217.9 -4.6 182 3-216 23-209 (229)
71 2etb_A Transient receptor pote 100.0 1.4E-29 4.7E-34 201.3 15.4 171 33-221 1-207 (256)
72 2pnn_A Transient receptor pote 100.0 4.7E-30 1.6E-34 206.0 12.5 171 2-200 55-272 (273)
73 1ycs_B 53BP2, P53BP2; ankyrin 100.0 3.2E-30 1.1E-34 203.1 7.2 176 2-207 6-193 (239)
74 4hbd_A KN motif and ankyrin re 100.0 1.9E-28 6.6E-33 196.9 16.7 157 2-185 112-273 (276)
75 1ycs_B 53BP2, P53BP2; ankyrin 100.0 1.9E-29 6.6E-34 198.6 10.2 161 31-221 2-165 (239)
76 3jxi_A Vanilloid receptor-rela 100.0 5E-29 1.7E-33 198.5 11.7 159 2-188 47-251 (260)
77 3t8k_A Uncharacterized protein 100.0 2.5E-29 8.7E-34 190.1 8.5 158 3-192 8-184 (186)
78 1d9s_A Cyclin-dependent kinase 100.0 3.2E-28 1.1E-32 175.0 13.8 130 71-219 5-135 (136)
79 3t8k_A Uncharacterized protein 100.0 1.6E-28 5.3E-33 185.8 10.1 155 34-218 6-177 (186)
80 1bi7_B P16INK4A, MTS1, multipl 100.0 1.2E-28 4.1E-33 181.4 8.9 143 30-202 8-151 (156)
81 2vge_A RELA-associated inhibit 100.0 6.5E-29 2.2E-33 194.3 6.7 161 18-207 2-168 (229)
82 1d9s_A Cyclin-dependent kinase 100.0 7.9E-28 2.7E-32 172.9 11.2 129 29-187 7-136 (136)
83 1sw6_A Regulatory protein SWI6 99.9 4E-28 1.4E-32 199.7 8.6 173 12-218 58-275 (327)
84 2jab_A H10-2-G3; HER2, darpin, 99.9 7.7E-27 2.6E-31 167.8 13.1 127 74-218 10-136 (136)
85 1n0r_A 4ANK, 4 ankyrin repeats 99.9 3.5E-26 1.2E-30 161.7 15.7 125 77-219 1-125 (126)
86 1n0r_A 4ANK, 4 ankyrin repeats 99.9 3.4E-26 1.2E-30 161.8 15.2 126 33-187 1-126 (126)
87 2jab_A H10-2-G3; HER2, darpin, 99.9 2.3E-26 7.9E-31 165.3 12.6 127 30-185 10-136 (136)
88 1bi7_B P16INK4A, MTS1, multipl 99.9 2E-26 6.7E-31 169.5 12.4 132 71-221 5-137 (156)
89 3deo_A Signal recognition part 99.9 2.8E-27 9.6E-32 178.7 6.3 163 8-217 7-181 (183)
90 3c5r_A BARD-1, BRCA1-associate 99.9 1.1E-26 3.6E-31 167.2 8.9 128 73-218 5-132 (137)
91 3ui2_A Signal recognition part 99.9 1.9E-27 6.5E-32 187.7 4.8 161 8-218 22-183 (244)
92 2aja_A Ankyrin repeat family p 99.9 1.8E-28 6E-33 204.5 -1.2 184 2-219 93-343 (376)
93 2aja_A Ankyrin repeat family p 99.9 6.3E-28 2.1E-32 201.1 -2.8 177 4-220 68-250 (376)
94 3aaa_C Myotrophin, protein V-1 99.9 2.5E-25 8.5E-30 157.0 10.3 117 75-209 4-120 (123)
95 3c5r_A BARD-1, BRCA1-associate 99.9 1.7E-25 5.8E-30 160.8 8.4 127 30-185 6-132 (137)
96 2b0o_E UPLC1; arfgap, structur 99.9 8.6E-25 2.9E-29 177.5 12.7 140 34-208 151-299 (301)
97 3ehr_A Osteoclast-stimulating 99.9 3.7E-25 1.3E-29 172.1 8.4 132 74-223 69-201 (222)
98 3ehr_A Osteoclast-stimulating 99.9 3.7E-25 1.3E-29 172.1 7.8 137 30-195 69-206 (222)
99 3aaa_C Myotrophin, protein V-1 99.9 2E-24 7E-29 152.3 9.1 119 30-177 3-121 (123)
100 2b0o_E UPLC1; arfgap, structur 99.9 1.3E-24 4.4E-29 176.5 9.1 138 3-175 153-299 (301)
101 3deo_A Signal recognition part 99.9 8.2E-24 2.8E-28 159.6 12.9 136 2-184 45-181 (183)
102 3ui2_A Signal recognition part 99.9 9E-24 3.1E-28 166.7 13.2 139 2-187 46-185 (244)
103 1dcq_A PYK2-associated protein 99.9 1.7E-23 5.8E-28 168.1 13.9 131 79-221 131-264 (278)
104 3lvq_E ARF-GAP with SH3 domain 99.9 9.6E-23 3.3E-27 176.6 14.3 129 34-191 132-269 (497)
105 1n0q_A 3ANK, 3 ankyrin repeats 99.9 2.9E-22 1E-26 134.0 11.1 90 128-218 2-91 (93)
106 3jue_A Arfgap with coiled-coil 99.9 1.5E-22 5.1E-27 168.1 11.6 126 76-219 197-325 (368)
107 3jue_A Arfgap with coiled-coil 99.9 3.3E-22 1.1E-26 166.1 12.9 132 55-205 211-347 (368)
108 1dcq_A PYK2-associated protein 99.9 9.8E-22 3.3E-26 157.8 15.1 126 35-188 131-264 (278)
109 1n0q_A 3ANK, 3 ankyrin repeats 99.9 6.5E-22 2.2E-26 132.3 11.6 66 121-187 28-93 (93)
110 2l6b_A NR1C; ankyrin, consensu 99.9 1.5E-22 5E-27 140.9 8.2 109 73-199 4-112 (115)
111 3lvq_E ARF-GAP with SH3 domain 99.9 1.3E-21 4.4E-26 169.5 13.6 132 78-221 132-266 (497)
112 2l6b_A NR1C; ankyrin, consensu 99.8 2.3E-21 7.7E-26 134.9 6.2 109 29-166 4-112 (115)
113 2zgd_A 3 repeat synthetic anky 99.8 2.7E-19 9.1E-24 123.4 9.3 93 121-214 17-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.8 8.8E-19 3E-23 120.8 9.5 93 71-181 17-109 (110)
115 1gp8_A Protein (scaffolding pr 45.1 12 0.0004 19.3 1.5 19 4-22 16-34 (40)
No 1
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=3.5e-37 Score=240.18 Aligned_cols=192 Identities=21% Similarity=0.171 Sum_probs=179.0
Q ss_pred CcHHHHHHHcCCchHHhhhhhhcccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChH
Q 047844 2 NSDLYEAAAKGEIEPFNQLAIDRQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAP 81 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~ 81 (264)
.||||+|+..|+.+++++|++.+...+..+..|.||||+|+ ..|+ .+++++|++.++..++..+..|.||
T Consensus 26 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~~~--------~~~v~~Ll~~~~~~~~~~~~~g~t~ 95 (223)
T 2f8y_A 26 ETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAV--SADA--------QGVFQILIRNRATDLDARMHDGTTP 95 (223)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH--HTTC--------HHHHHHHHHBTTSCTTCCCTTCCCH
T ss_pred CchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH--HcCC--------HHHHHHHHHcCCCCcccCCCCCCcH
Confidence 58999999999999999999954444558999999999999 9999 9999999999986688899999999
Q ss_pred HHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCC
Q 047844 82 LHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANGS 161 (264)
Q Consensus 82 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~ 161 (264)
||+|+..|+.+++++|++.|++++. ++..|.||||+|+..|+.+++++|++.|+++ +..|..
T Consensus 96 L~~A~~~~~~~~~~~Ll~~g~~~~~-----------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~ 157 (223)
T 2f8y_A 96 LILAARLAVEGMLEDLINSHADVNA-----------------VDDLGKSALHWAAAVNNVDAAVVLLKNGANK-DMQNNR 157 (223)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTC-----------------BCTTSCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTT
T ss_pred HHHHHHhCcHHHHHHHHHcCCCCcC-----------------cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCC
Confidence 9999999999999999999887544 8889999999999999999999999999996 788999
Q ss_pred CCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCChHHHHHHHhhhCCC
Q 047844 162 GETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRSCAASRCHKLHRSSR 221 (264)
Q Consensus 162 g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~~ 221 (264)
|.||||+|+..++.+++++|+++|++++.++..|.||+++|+..++.+++++|+.+++..
T Consensus 158 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~ 217 (223)
T 2f8y_A 158 EETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVR 217 (223)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSS
T ss_pred CcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCc
Confidence 999999999999999999999999999999999999999999999999999999988654
No 2
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=3.1e-37 Score=241.93 Aligned_cols=205 Identities=18% Similarity=0.134 Sum_probs=178.2
Q ss_pred CcHHHHHHHcCCchHHhhhhhh-cccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccc----eecCC
Q 047844 2 NSDLYEAAAKGEIEPFNQLAID-RQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLL----LQVNA 76 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~-~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~----~~~~~ 76 (264)
+||||+|+..|+.+++++|++. +...+..|..|.||||+|+ ..|+ .+++++|++.+++.. +..|.
T Consensus 4 ~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~--~~g~--------~~~v~~Ll~~~~~~~~~~~~~~~~ 73 (232)
T 2rfa_A 4 ESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAA--LYDN--------LEAAMVLMEAAPELVFEPMTSELY 73 (232)
T ss_dssp TCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHH--HTTC--------HHHHHHHHHHCGGGGGCCCCSTTT
T ss_pred CCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHH--HcCC--------HHHHHHHHHcCchhccccccccCC
Confidence 5899999999999999999984 5555568999999999999 9999 999999999998843 56678
Q ss_pred CCChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCC
Q 047844 77 KGDAPLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPY 156 (264)
Q Consensus 77 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~ 156 (264)
.|.||||+|+..|+.+++++|++.|++++..+.... .....+..+..|.||||+|+..|+.+++++|++.|+++ +
T Consensus 74 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~----~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~ 148 (232)
T 2rfa_A 74 EGQTALHIAVINQNVNLVRALLARGASVSARATGSV----FHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADI-R 148 (232)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGG----GSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCT-T
T ss_pred CCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcc----eeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCC-C
Confidence 999999999999999999999999988765321110 01112334568999999999999999999999999996 7
Q ss_pred CCCCCCCCHHHHHHHhChHHHH----HHHHhhCCCC------CcCCCCCccHHhHHHhcCChHHHHHHHhhhCCC
Q 047844 157 SANGSGETPLYLAAARAHKEIS----AEILQKCPSP------AHEGPNGKTALHAAVCSRSCAASRCHKLHRSSR 221 (264)
Q Consensus 157 ~~~~~g~t~Lh~A~~~~~~~~~----~~Ll~~ga~~------~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~~ 221 (264)
.+|..|+||||+|+..++.+++ ++|+++|++. +.+|..|.||||+|+..|+.+++++|+.++...
T Consensus 149 ~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~ 223 (232)
T 2rfa_A 149 AQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHI 223 (232)
T ss_dssp CCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC
T ss_pred CCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccc
Confidence 8999999999999999999988 9999999988 589999999999999999999999999988543
No 3
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=2e-37 Score=249.66 Aligned_cols=208 Identities=20% Similarity=0.223 Sum_probs=178.9
Q ss_pred CcHHHHHHHcCCchHHhhhhh---hcccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCC
Q 047844 2 NSDLYEAAAKGEIEPFNQLAI---DRQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKG 78 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~---~~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g 78 (264)
.||||+||..|+.+++++|++ +.+..+..+..|.||||+|+ ..|+ .+++++|++.+.+ ++..+..|
T Consensus 10 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~--~~g~--------~~~v~~Ll~~ga~-~~~~~~~g 78 (282)
T 1oy3_D 10 DTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAA--ILGE--------ASTVEKLYAAGAG-VLVAERGG 78 (282)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHH--HHTC--------HHHHHHHHHTTCC-SSCCCTTS
T ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHH--HcCC--------HHHHHHHHHcCCC-CCCCCCCC
Confidence 589999999999999999998 32234558999999999999 9999 9999999999999 78899999
Q ss_pred ChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhc------------------------------hhhHHHHHhcCCCCCC
Q 047844 79 DAPLHVAARYGHAAVVEALIEIAKQESDQEIESG------------------------------VESTARHMLGMKNDEE 128 (264)
Q Consensus 79 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~------------------------------~~~~~~~~l~~~~~~g 128 (264)
+||||+|+..|+.+++++|++.++.......... ........++.++..|
T Consensus 79 ~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 158 (282)
T 1oy3_D 79 HTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDG 158 (282)
T ss_dssp CCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTS
T ss_pred CCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCC
Confidence 9999999999999999999998765322110000 0001123367788999
Q ss_pred CChhhHHHhcCCHHHHHHHhcCCCCCCCCCC-CCCCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCC
Q 047844 129 DTALHEAVQSGSLDVVKILLGADPAFPYSAN-GSGETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRS 207 (264)
Q Consensus 129 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~ 207 (264)
.||||+|+..|+.+++++|++.|+++ +..+ ..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++
T Consensus 159 ~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~ 237 (282)
T 1oy3_D 159 HTPLHVAVIHKDAEMVRLLRDAGADL-NKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPN 237 (282)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSC
T ss_pred cCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCC
Confidence 99999999999999999999999997 4555 459999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhhhCCC
Q 047844 208 CAASRCHKLHRSSR 221 (264)
Q Consensus 208 ~~~~~~l~~~~~~~ 221 (264)
.+++++|+.+++..
T Consensus 238 ~~~v~~Ll~~ga~~ 251 (282)
T 1oy3_D 238 PILARLLRAHGAPE 251 (282)
T ss_dssp HHHHHHHHHTTCCC
T ss_pred cHHHHHHHHcCCCc
Confidence 99999999998754
No 4
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=4e-37 Score=244.61 Aligned_cols=189 Identities=21% Similarity=0.188 Sum_probs=174.3
Q ss_pred CcHHHHHHHcCCchHHhhhhhhcccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChH
Q 047844 2 NSDLYEAAAKGEIEPFNQLAIDRQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAP 81 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~ 81 (264)
.||||+|+..|+.+++++|++.+...+..+..|.||||+|+ ..|+ .+++++|++.+...++..+..|.||
T Consensus 58 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~~~--------~~~v~~Ll~~~~~~~~~~~~~g~t~ 127 (253)
T 1yyh_A 58 ETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAV--SADA--------QGVFQILIRNRATDLDARMHDGTTP 127 (253)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH--HHTC--------HHHHHHHHHSTTSCTTCCCTTCCCH
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH--HcCC--------HHHHHHHHHcCCCCccccCCCCCcH
Confidence 48999999999999999999944444457899999999999 9999 9999999999985588899999999
Q ss_pred HHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCC
Q 047844 82 LHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANGS 161 (264)
Q Consensus 82 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~ 161 (264)
||+|+..|+.+++++|++.|++++. ++..|.||||+|+..|+.+++++|++.|+++ +..|..
T Consensus 128 L~~A~~~~~~~~v~~Ll~~g~~~~~-----------------~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~ 189 (253)
T 1yyh_A 128 LILAARLAVEGMLEDLINSHADVNA-----------------VDDLGKSALHWAAAVNNVDAAVVLLKNGANK-DMQNNR 189 (253)
T ss_dssp HHHHHHHTCSSHHHHHHHTTCCTTC-----------------BCTTSCBHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTT
T ss_pred HHHHHHcChHHHHHHHHHcCCCCCC-----------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCC
Confidence 9999999999999999999988544 8899999999999999999999999999996 788999
Q ss_pred CCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCChHHHHHHHhhh
Q 047844 162 GETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRSCAASRCHKLHR 218 (264)
Q Consensus 162 g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~ 218 (264)
|.||||+|+..|+.+++++|+++|++++.+|..|.||+++|+..|+.+++++|....
T Consensus 190 g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~ 246 (253)
T 1yyh_A 190 EETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDLEH 246 (253)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC--
T ss_pred CCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999997764
No 5
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=2.1e-36 Score=236.99 Aligned_cols=191 Identities=21% Similarity=0.260 Sum_probs=177.4
Q ss_pred CcHHHHHHHcCCchHHhhhhh-hcccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCCh
Q 047844 2 NSDLYEAAAKGEIEPFNQLAI-DRQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDA 80 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~-~~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t 80 (264)
++|||.|+..|+++.++.|++ .+...+..+..|.||||+|+ ..|+ .+++++|++.+.+ ++..|..|+|
T Consensus 7 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~--~~g~--------~~~v~~Ll~~g~~-~~~~~~~g~t 75 (231)
T 3aji_A 7 NIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWAC--SAGH--------TEIVEFLLQLGVP-VNDKDDAGWS 75 (231)
T ss_dssp SSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHH--HHTC--------HHHHHHHHHTTCC-SCCCCTTSCC
T ss_pred cchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHH--HcCc--------HHHHHHHHHhCCC-CCCcCCCCCC
Confidence 689999999999999999998 44444557999999999999 9999 9999999999988 7889999999
Q ss_pred HHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCC
Q 047844 81 PLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANG 160 (264)
Q Consensus 81 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~ 160 (264)
|||+|+..|+.+++++|++.|++++. ++..|.||||+|+..|+.+++++|++.|+++ +..+.
T Consensus 76 ~L~~A~~~~~~~~v~~Ll~~g~~~~~-----------------~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~ 137 (231)
T 3aji_A 76 PLHIAASAGXDEIVKALLVKGAHVNA-----------------VNQNGCTPLHYAASKNRHEIAVMLLEGGANP-DAKDH 137 (231)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTC-----------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT
T ss_pred HHHHHHHcCHHHHHHHHHHcCCCCCC-----------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCC
Confidence 99999999999999999999987544 8889999999999999999999999999995 78899
Q ss_pred CCCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCChHHHHHHHhhhCCC
Q 047844 161 SGETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRSCAASRCHKLHRSSR 221 (264)
Q Consensus 161 ~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~~ 221 (264)
.|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|+.+++..
T Consensus 138 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 198 (231)
T 3aji_A 138 YDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASI 198 (231)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS
T ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999987653
No 6
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=2.7e-36 Score=235.83 Aligned_cols=193 Identities=18% Similarity=0.163 Sum_probs=173.8
Q ss_pred CcHHHHHHHcCCchHHhhhhh-hcccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhC--CccceecCCCC
Q 047844 2 NSDLYEAAAKGEIEPFNQLAI-DRQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMC--PSLLLQVNAKG 78 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~-~~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~--~~~~~~~~~~g 78 (264)
+||||+||..|+.+++++|++ ..+.....+..|.||||+|+ ..|+ .+++++|++.+ .+.....+..|
T Consensus 3 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~--~~~~--------~~~v~~Ll~~~~~~~~~~~~~~~g 72 (228)
T 2dzn_A 3 NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSV--SFQA--------HEITSFLLSKMENVNLDDYPDDSG 72 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHH--HTTC--------HHHHHHHHHTCTTCCGGGCCCTTS
T ss_pred ccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHH--HcCC--------HHHHHHHHhccccccccccCCCCC
Confidence 689999999999999999998 34444447899999999999 9999 99999999999 55333378999
Q ss_pred ChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCC
Q 047844 79 DAPLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSA 158 (264)
Q Consensus 79 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~ 158 (264)
+||||+|+..|+.+++++|++.|...+ ++..+..|.||||+|+..|+.+++++|++.|+++ +.+
T Consensus 73 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~---------------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~ 136 (228)
T 2dzn_A 73 WTPFHIACSVGNLEVVKSLYDRPLKPD---------------LNKITNQGVTCLHLAVGKKWFEVSQFLIENGASV-RIK 136 (228)
T ss_dssp CCHHHHHHHHCCHHHHHHHHSSSSCCC---------------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-CCC
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCcc---------------cccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCc-ccc
Confidence 999999999999999999999983221 3448889999999999999999999999999995 788
Q ss_pred CCCCCCHHHHHHHhChHHHHHHHHhhC-CCCCcCCCCCccHHhHHHhcCChHHHHHHH-hhhCC
Q 047844 159 NGSGETPLYLAAARAHKEISAEILQKC-PSPAHEGPNGKTALHAAVCSRSCAASRCHK-LHRSS 220 (264)
Q Consensus 159 ~~~g~t~Lh~A~~~~~~~~~~~Ll~~g-a~~~~~~~~g~tpl~~A~~~~~~~~~~~l~-~~~~~ 220 (264)
|..|+||||+|+..|+.+++++|++.| ++++.+|..|.||||+|+..++.+++++|+ .+++.
T Consensus 137 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~ 200 (228)
T 2dzn_A 137 DKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAE 200 (228)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCC
Confidence 999999999999999999999999999 999999999999999999999999999999 77654
No 7
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=3e-36 Score=240.67 Aligned_cols=188 Identities=19% Similarity=0.196 Sum_probs=163.3
Q ss_pred CcHHHHHHHcCCchHHhhhhhhcccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChH
Q 047844 2 NSDLYEAAAKGEIEPFNQLAIDRQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAP 81 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~ 81 (264)
.||||+||..|+.+++++|++.+...+..|..|.||||+|+ ..|+ .+++++|++.+.+ ++..|..|+||
T Consensus 4 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~g~--------~~~v~~Ll~~g~~-~~~~~~~g~t~ 72 (261)
T 2xai_A 4 WSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEAC--LGGH--------LSCVKILLKHGAQ-VNGVTADWHTP 72 (261)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHH--HHTC--------HHHHHHHHHTTCC-TTCCCTTSCCH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHH--HcCC--------HHHHHHHHHCCCC-CCCCCCCCCCH
Confidence 58999999999999999999954444558999999999999 9999 9999999999988 78899999999
Q ss_pred HHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCC
Q 047844 82 LHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANGS 161 (264)
Q Consensus 82 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~ 161 (264)
||+|+..|+.+++++|++.|++++. +..|.||||+|+..|+.+++++|++.|+++ +..|..
T Consensus 73 L~~A~~~~~~~~v~~Ll~~g~~~~~------------------~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~ 133 (261)
T 2xai_A 73 LFNACVSGSWDCVNLLLQHGASVQP------------------ESDLASPIHEAARRGHVECVNSLIAYGGNI-DHKISH 133 (261)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSSC------------------SCTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCBTT
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCC------------------CCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CcCCCC
Confidence 9999999999999999999987542 345788888888888888888888888885 677888
Q ss_pred CCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCChHHHHHHHhhhCC
Q 047844 162 GETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRSCAASRCHKLHRSS 220 (264)
Q Consensus 162 g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~ 220 (264)
|+||||+|+..++.+++++|+++|++++. +..|.||||+|+..++.+++++|+.+++.
T Consensus 134 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad 191 (261)
T 2xai_A 134 LGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVARTASEELACLLMDFGAD 191 (261)
T ss_dssp TBCHHHHHHHTTCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCC
Confidence 88888888888888888888888888884 77888888888888888888888887765
No 8
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=3.1e-36 Score=231.13 Aligned_cols=188 Identities=20% Similarity=0.228 Sum_probs=171.7
Q ss_pred CcHHHHHHHcCCchHHhhhhhhcc-cccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCCh
Q 047844 2 NSDLYEAAAKGEIEPFNQLAIDRQ-LGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDA 80 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~~~-~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t 80 (264)
.||||.|+..|+.+.++.|+.... ..+..+..|.||||+|+ ..|+ .+++++|++.+.+ ++..+..|.|
T Consensus 6 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~--~~~~--------~~~v~~Ll~~g~~-~~~~~~~g~t 74 (201)
T 3hra_A 6 VGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAV--HNND--------IEIAKALIDRGAD-INLQNSISDS 74 (201)
T ss_dssp TTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHH--HHTC--------HHHHHHHHHTTCC-TTCCCTTSCC
T ss_pred ccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHH--HcCC--------HHHHHHHHHcCCC-CCCCCCCCCC
Confidence 479999999999999999998322 44558899999999999 9999 9999999999998 7889999999
Q ss_pred HHHHHHHhCCHHHHHHHHHHhh-hcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCC-CCCCCCC
Q 047844 81 PLHVAARYGHAAVVEALIEIAK-QESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGAD-PAFPYSA 158 (264)
Q Consensus 81 ~L~~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~ 158 (264)
|||+|+..|+.+++++|++.+. + ++..+..|.||||+|+..|+.+++++|++.| .+ .+..
T Consensus 75 ~l~~A~~~~~~~~~~~Ll~~~~~~-----------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~ 136 (201)
T 3hra_A 75 PYLYAGAQGRTEILAYMLKHATPD-----------------LNKHNRYGGNALIPAAEKGHIDNVKLLLEDGRED-IDFQ 136 (201)
T ss_dssp HHHHHHHTTCHHHHHHHHHHSCCC-----------------TTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCC-TTCC
T ss_pred HHHHHHHcCCHHHHHHHHhccCcc-----------------cccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-cCCC
Confidence 9999999999999999996543 3 3458889999999999999999999999999 66 4788
Q ss_pred CCCCCCHHHHHHHhCh-----HHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCChHHHHHHHhhh
Q 047844 159 NGSGETPLYLAAARAH-----KEISAEILQKCPSPAHEGPNGKTALHAAVCSRSCAASRCHKLHR 218 (264)
Q Consensus 159 ~~~g~t~Lh~A~~~~~-----~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~ 218 (264)
|..|+||||+|+..++ .+++++|+++|++++.+|..|.||+|+|+..++.+++++|+.+|
T Consensus 137 ~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 137 NDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp CTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred CCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 9999999999999887 99999999999999999999999999999999999999998764
No 9
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=1.3e-36 Score=238.19 Aligned_cols=189 Identities=23% Similarity=0.206 Sum_probs=176.4
Q ss_pred CcHHHHHHHcCCchHHhhhhhhcccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChH
Q 047844 2 NSDLYEAAAKGEIEPFNQLAIDRQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAP 81 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~ 81 (264)
.||||+|+..|+.+++++|++.+...+..+..|.||||+|+ ..|+ .+++++|++.+.+ ++..+..|.||
T Consensus 41 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~~~--------~~~v~~Ll~~g~~-~~~~~~~g~t~ 109 (231)
T 3aji_A 41 RTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAA--SAGX--------DEIVKALLVKGAH-VNAVNQNGCTP 109 (231)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHH--HHTC--------HHHHHHHHHTTCC-TTCCCTTSCCH
T ss_pred CCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHH--HcCH--------HHHHHHHHHcCCC-CCCCCCCCCCH
Confidence 58999999999999999999944444457899999999999 9999 9999999999998 78899999999
Q ss_pred HHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCC
Q 047844 82 LHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANGS 161 (264)
Q Consensus 82 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~ 161 (264)
||+|+..|+.+++++|++.|++++. ++..|.||||+|+..|+.+++++|++.|+++ +.+|..
T Consensus 110 L~~A~~~~~~~~~~~Ll~~g~~~~~-----------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~ 171 (231)
T 3aji_A 110 LHYAASKNRHEIAVMLLEGGANPDA-----------------KDHYDATAMHRAAAKGNLKMVHILLFYKAST-NIQDTE 171 (231)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTC-----------------CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCC-----------------cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCc-cccCCC
Confidence 9999999999999999999887544 8889999999999999999999999999995 788999
Q ss_pred CCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCChHHHHHHHhhhC
Q 047844 162 GETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRSCAASRCHKLHRS 219 (264)
Q Consensus 162 g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~ 219 (264)
|+||||+|+..++.+++++|+++|++++.+|..|.||+++|+..++.+++++|..+++
T Consensus 172 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a 229 (231)
T 3aji_A 172 GNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEGEEA 229 (231)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHccccc
Confidence 9999999999999999999999999999999999999999999999999999988764
No 10
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=4.7e-37 Score=241.63 Aligned_cols=198 Identities=18% Similarity=0.165 Sum_probs=178.2
Q ss_pred CcHHHHHHHcCCchHHhhhhhhc----ccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCC
Q 047844 2 NSDLYEAAAKGEIEPFNQLAIDR----QLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAK 77 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~~----~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~ 77 (264)
.||||+|+..|+.+++++|++.. ...+..+..|.||||+|+ ..|+ .+++++|++.+.+ ++..+..
T Consensus 9 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~--~~~~--------~~~v~~Ll~~g~~-~~~~~~~ 77 (236)
T 1ikn_D 9 DSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAV--ITNQ--------PEIAEALLGAGCD-PELRDFR 77 (236)
T ss_dssp CCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHH--HTTC--------HHHHHCCCSCCCC-SCCCCTT
T ss_pred CchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHH--HcCC--------HHHHHHHHHcCCC-CCCcCCC
Confidence 58999999999999999999822 134558899999999999 9999 9999999999988 7889999
Q ss_pred CChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCC
Q 047844 78 GDAPLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYS 157 (264)
Q Consensus 78 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~ 157 (264)
|+||||+|+..|+.+++++|++.++.+.. ...++..+..|.||||+|+..|+.+++++|++.|+++ +.
T Consensus 78 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~-----------~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~ 145 (236)
T 1ikn_D 78 GNTPLHLACEQGCLASVGVLTQSCTTPHL-----------HSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADV-NA 145 (236)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHSTTTTSS-----------SCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCT-TC
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcccchhH-----------HHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CC
Confidence 99999999999999999999999876322 1124558889999999999999999999999999996 66
Q ss_pred CCC-CCCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCChHHHHHHHhhhCCCC
Q 047844 158 ANG-SGETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRSCAASRCHKLHRSSRF 222 (264)
Q Consensus 158 ~~~-~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~~~ 222 (264)
.+. .|+||||+|+..|+.+++++|+++|++++.++..|.||+++|+..++.+++++|+.+++...
T Consensus 146 ~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~ 211 (236)
T 1ikn_D 146 QEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENL 211 (236)
T ss_dssp CCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGG
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhh
Confidence 776 99999999999999999999999999999999999999999999999999999999987543
No 11
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=9.8e-36 Score=234.48 Aligned_cols=195 Identities=21% Similarity=0.243 Sum_probs=176.3
Q ss_pred CcHHHHHHHcCCchHHhhhhh----hcccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCC
Q 047844 2 NSDLYEAAAKGEIEPFNQLAI----DRQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAK 77 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~----~~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~ 77 (264)
+||||+||..|+.+++++|++ .+...+..+..|.||||+|+ ..|+ .+++++|++.+.+ ++..+..
T Consensus 10 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~--~~~~--------~~~v~~Ll~~g~~-~~~~~~~ 78 (241)
T 1k1a_A 10 DTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAV--ITTL--------PSVVRLLVTAGAS-PMALDRH 78 (241)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHH--HTTC--------HHHHHHHHHTTCC-TTCCCTT
T ss_pred CcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHH--HcCC--------HHHHHHHHHcCCC-ccccCCC
Confidence 589999999999999999997 34444557899999999999 9999 9999999999988 7888999
Q ss_pred CChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCC
Q 047844 78 GDAPLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYS 157 (264)
Q Consensus 78 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~ 157 (264)
|.||||+|+..|+.+++++|++.++.... .++..+..|.||||+|+..|+.+++++|++.|+++ +.
T Consensus 79 g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~-------------~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~ 144 (241)
T 1k1a_A 79 GQTAAHLACEHRSPTCLRALLDSAAPGTL-------------DLEARNYDGLTALHVAVNTECQETVQLLLERGADI-DA 144 (241)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHSCTTSC-------------CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCccc-------------cccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCc-cc
Confidence 99999999999999999999999873211 13457889999999999999999999999999996 55
Q ss_pred CC-CCCCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCChHHHHHHHhhhCCC
Q 047844 158 AN-GSGETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRSCAASRCHKLHRSSR 221 (264)
Q Consensus 158 ~~-~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~~ 221 (264)
.+ ..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..++.+++++|+.+++..
T Consensus 145 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 209 (241)
T 1k1a_A 145 VDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADS 209 (241)
T ss_dssp CCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred ccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCC
Confidence 55 78999999999999999999999999999999999999999999999999999999988653
No 12
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1.7e-36 Score=240.95 Aligned_cols=192 Identities=18% Similarity=0.232 Sum_probs=154.4
Q ss_pred CcHHHHHHHcC-------------CchHHhhhhhh-cccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhC
Q 047844 2 NSDLYEAAAKG-------------EIEPFNQLAID-RQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMC 67 (264)
Q Consensus 2 ~~~l~~A~~~g-------------~~~~~~~l~~~-~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~ 67 (264)
.||||+|+..| +.++++.|++. .+.....|..|.||||+|+ ..|+ .+++++|++.+
T Consensus 11 ~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~--~~g~--------~~~v~~Ll~~g 80 (253)
T 1yyh_A 11 FTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAA--RYSR--------SDAAKRLLEAS 80 (253)
T ss_dssp -----------------------------------------CCCTTSCCHHHHHH--HTTC--------HHHHHHHHHTT
T ss_pred CcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHH--HcCC--------HHHHHHHHHcC
Confidence 58999999987 89999999983 3332335889999999999 9999 99999999999
Q ss_pred CccceecCCCCChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHH
Q 047844 68 PSLLLQVNAKGDAPLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKIL 147 (264)
Q Consensus 68 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~L 147 (264)
.+ ++..+..|+||||+|+..|+.+++++|++.+... ++..+..|.||||+|+..|+.+++++|
T Consensus 81 ~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~----------------~~~~~~~g~t~L~~A~~~~~~~~v~~L 143 (253)
T 1yyh_A 81 AD-ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATD----------------LDARMHDGTTPLILAARLAVEGMLEDL 143 (253)
T ss_dssp CC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSC----------------TTCCCTTCCCHHHHHHHHTCSSHHHHH
T ss_pred CC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC----------------ccccCCCCCcHHHHHHHcChHHHHHHH
Confidence 98 7889999999999999999999999999988621 344888999999999999999999999
Q ss_pred hcCCCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCChHHHHHHHhhhCCC
Q 047844 148 LGADPAFPYSANGSGETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRSCAASRCHKLHRSSR 221 (264)
Q Consensus 148 l~~g~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~~ 221 (264)
++.|+++ +..|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|+.+++..
T Consensus 144 l~~g~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 216 (253)
T 1yyh_A 144 INSHADV-NAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANR 216 (253)
T ss_dssp HHTTCCT-TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred HHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCc
Confidence 9999996 788999999999999999999999999999999999999999999999999999999999998654
No 13
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=1.2e-35 Score=233.63 Aligned_cols=191 Identities=20% Similarity=0.169 Sum_probs=176.5
Q ss_pred CcHHHHHHHcCCchHHhhhhhhcccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChH
Q 047844 2 NSDLYEAAAKGEIEPFNQLAIDRQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAP 81 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~ 81 (264)
.||||+|+..|+.+++++|++.+...+..+..|.||||.|+ ..|+ .+++++|++.+.+ ++..+..|.||
T Consensus 12 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~~~--------~~~v~~Ll~~g~~-~~~~~~~g~t~ 80 (237)
T 3b7b_A 12 RSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAA--ENNH--------LEAVKYLIKAGAL-VDPKDAEGSTC 80 (237)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH--HTTC--------HHHHHHHHTTTCC-CCCCCTTSCCH
T ss_pred CCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHH--HhCC--------HHHHHHHHhCCCC-CCCCCCCCCcH
Confidence 58999999999999999999954444557899999999999 9999 9999999999988 78889999999
Q ss_pred HHHHHHhCCHHHHHHHHHHh-hhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCC
Q 047844 82 LHVAARYGHAAVVEALIEIA-KQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANG 160 (264)
Q Consensus 82 L~~A~~~g~~~~v~~Ll~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~ 160 (264)
||+|+..|+.+++++|++.+ ..+ +..+..|.||||+|+..|+.+++++|++.|+++ +..+.
T Consensus 81 L~~A~~~~~~~~~~~Ll~~~~~~~-----------------~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~ 142 (237)
T 3b7b_A 81 LHLAAKKGHYEVVQYLLSNGQMDV-----------------NCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDI-NIRDN 142 (237)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCCCT-----------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT
T ss_pred HHHHHHcCCHHHHHHHHhCCCCCc-----------------ccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CccCC
Confidence 99999999999999999988 443 347889999999999999999999999999996 78899
Q ss_pred CCCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCChHHHHHHHhhhCCC
Q 047844 161 SGETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRSCAASRCHKLHRSSR 221 (264)
Q Consensus 161 ~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~~ 221 (264)
.|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..++.+++++|+.+++..
T Consensus 143 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~ 203 (237)
T 3b7b_A 143 EENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDV 203 (237)
T ss_dssp TSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCC
Confidence 9999999999999999999999999999999999999999999999999999999987643
No 14
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.6e-35 Score=238.14 Aligned_cols=188 Identities=20% Similarity=0.201 Sum_probs=171.9
Q ss_pred CcHHHHHHHcCCchHHhhhhhhcccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChH
Q 047844 2 NSDLYEAAAKGEIEPFNQLAIDRQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAP 81 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~ 81 (264)
.||||+||..|+.+++++|++.+...+..|..|.||||+|+ ..|+ .+++++|++.+.+ ++..|..|.||
T Consensus 60 ~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~g~--------~~~v~~Ll~~ga~-~~~~~~~g~t~ 128 (285)
T 3d9h_A 60 WSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEAC--LGGH--------LSCVKILLKHGAQ-VNGVTADWHTP 128 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHH--HTTC--------HHHHHHHHHTTCC-SSCCCTTCCCH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHH--HCCc--------HHHHHHHHHCCCC-CCCCCCCCCCH
Confidence 48999999999999999999944444558999999999999 9999 9999999999988 78899999999
Q ss_pred HHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCC
Q 047844 82 LHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANGS 161 (264)
Q Consensus 82 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~ 161 (264)
||+|+..|+.+++++|++.|++++. +..|.||||+|+..|+.+++++|++.|+++ +..|..
T Consensus 129 L~~A~~~~~~~~v~~Ll~~g~~~~~------------------~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~ 189 (285)
T 3d9h_A 129 LFNACVSGSWDCVNLLLQHGASVQP------------------ESDLASPIHEAARRGHVECVNSLIAYGGNI-DHKISH 189 (285)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSSC------------------SCTTSCHHHHHHHHTCHHHHHHHHHTTCCT-TCCBTT
T ss_pred HHHHHHcCHHHHHHHHHHCCCCCCC------------------CCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCC
Confidence 9999999999999999999887542 445899999999999999999999999995 788999
Q ss_pred CCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCChHHHHHHHhhhCC
Q 047844 162 GETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRSCAASRCHKLHRSS 220 (264)
Q Consensus 162 g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~ 220 (264)
|+||||+|+..|+.+++++|++.|++++. +..|.||||+|+..++.+++++|+.+++.
T Consensus 190 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad 247 (285)
T 3d9h_A 190 LGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGAD 247 (285)
T ss_dssp TBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 99999999999999999999999999994 88899999999999999999999998764
No 15
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.6e-36 Score=240.36 Aligned_cols=191 Identities=27% Similarity=0.305 Sum_probs=145.0
Q ss_pred cHHHHHHHcCCchHHhhhhhhcc--------cccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceec
Q 047844 3 SDLYEAAAKGEIEPFNQLAIDRQ--------LGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQV 74 (264)
Q Consensus 3 ~~l~~A~~~g~~~~~~~l~~~~~--------~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~ 74 (264)
++|+.||..|++++|++|++... ..+..+..|.|||+.|+ ..++. ..++++|++.|.+ ++..
T Consensus 13 ~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~--~~~~~-------~~~v~~Ll~~Gad-vn~~ 82 (269)
T 4b93_B 13 EKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCP--KCAPA-------QKRLAKVPASGLG-VNVT 82 (269)
T ss_dssp HHHHHHHHTTCHHHHHHHHTCC-------------------------------------------------CCCC-TTCC
T ss_pred hHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHH--HhCCH-------HHHHHHHHHCCCC-CCCc
Confidence 68999999999999999998211 23346778999999999 88771 3578999999998 7899
Q ss_pred CCCCChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCC
Q 047844 75 NAKGDAPLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAF 154 (264)
Q Consensus 75 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~ 154 (264)
|.+|+||||+|+..|+.+++++|++.++++.. ++..|.||+++|+..++.+++++|++.|+++
T Consensus 83 d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~-----------------~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~ 145 (269)
T 4b93_B 83 SQDGSSPLHVAALHGRADLIPLLLKHGANAGA-----------------RNADQAVPLHLACQQGHFQVVKCLLDSNAKP 145 (269)
T ss_dssp CTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTC-----------------CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCc-----------------cCCCCCCccccccccChHHHHHHHHHCCCCC
Confidence 99999999999999999999999999988654 7888999999999999999999999999985
Q ss_pred CCCCCCCCCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCChHHHHHHHhhhCCC
Q 047844 155 PYSANGSGETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRSCAASRCHKLHRSSR 221 (264)
Q Consensus 155 ~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~~ 221 (264)
+.+|..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+.+++..
T Consensus 146 -n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~ 211 (269)
T 4b93_B 146 -NKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASV 211 (269)
T ss_dssp -CCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCS
T ss_pred -CCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 788899999999999999999999999999999999999999999999999999999999888653
No 16
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=5.6e-36 Score=235.84 Aligned_cols=189 Identities=17% Similarity=0.154 Sum_probs=170.6
Q ss_pred CcHHHHHHHcCCchHHhhhhhhcccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCc---cceecCCCC
Q 047844 2 NSDLYEAAAKGEIEPFNQLAIDRQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPS---LLLQVNAKG 78 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~---~~~~~~~~g 78 (264)
.||||+|+..|+.+++++|++.+...+..+..|.||||+|+ ..|+ .+++++|++.+.. .++..+..|
T Consensus 47 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~--~~~~--------~~~~~~Ll~~~~~~~~~~~~~~~~g 116 (241)
T 1k1a_A 47 QTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLAC--EHRS--------PTCLRALLDSAAPGTLDLEARNYDG 116 (241)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH--HTTC--------HHHHHHHHHHSCTTSCCTTCCCTTS
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHH--HcCC--------HHHHHHHHHcCCCccccccccCcCC
Confidence 48999999999999999999954444457999999999999 9999 9999999999872 267889999
Q ss_pred ChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCC-CCCCChhhHHHhcCCHHHHHHHhcCCCCCCCC
Q 047844 79 DAPLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKN-DEEDTALHEAVQSGSLDVVKILLGADPAFPYS 157 (264)
Q Consensus 79 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~ 157 (264)
.||||+|+..|+.+++++|++.|++++. .+ ..|.||||+|+..|+.+++++|++.|+++ +.
T Consensus 117 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-----------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~ 178 (241)
T 1k1a_A 117 LTALHVAVNTECQETVQLLLERGADIDA-----------------VDIKSGRSPLIHAVENNSLSMVQLLLQHGANV-NA 178 (241)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTC-----------------CCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TC
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCccc-----------------ccccCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CC
Confidence 9999999999999999999999988554 56 78999999999999999999999999996 78
Q ss_pred CCCCCCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCChHHHHHHHhhh
Q 047844 158 ANGSGETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRSCAASRCHKLHR 218 (264)
Q Consensus 158 ~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~ 218 (264)
.|..|+||||+|+..++.+++++|+++|++++.+|..|.||+++|+..++.++++.|...+
T Consensus 179 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~~ 239 (241)
T 1k1a_A 179 QMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRP 239 (241)
T ss_dssp BCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC-----
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhccCC
Confidence 8999999999999999999999999999999999999999999999999999999987654
No 17
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=4.3e-36 Score=238.95 Aligned_cols=204 Identities=16% Similarity=0.089 Sum_probs=167.8
Q ss_pred CcHHHHHHHcCCchHHhhhhh----hcccccc----cCCCCCchhHHHHHHhh---hcCcCCCcccHHHHHHHHHhCCcc
Q 047844 2 NSDLYEAAAKGEIEPFNQLAI----DRQLGSL----VTHKKNTVLHVNIIASY---TQNKEGESVSTKFVERIIEMCPSL 70 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~----~~~~~~~----~~~~g~t~L~~A~~~~~---g~~~~~~~~~~~~~~~ll~~~~~~ 70 (264)
.||||+||..|+.+.++.|++ .+...+. .|..|.||||+|+ .. |+ .+++++|++.+.+.
T Consensus 3 ~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~--~~~~~g~--------~~~v~~Ll~~g~~~ 72 (256)
T 2etb_A 3 RDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAV--LNLQDGV--------NACIMPLLQIDKDS 72 (256)
T ss_dssp HHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHH--HTCBTTB--------CTTHHHHHHHHHHT
T ss_pred ccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHH--Hccccch--------HHHHHHHHhcCCcc
Confidence 489999999999986655554 3333343 6889999999999 99 99 99999999988763
Q ss_pred ce----------ecCCCCChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCC
Q 047844 71 LL----------QVNAKGDAPLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGS 140 (264)
Q Consensus 71 ~~----------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~ 140 (264)
.. ..|..|.||||+|+..|+.+++++|++.|++++..+..... ....+..+..|.||||+|+..|+
T Consensus 73 ~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~----~~~~~~~~~~g~tpL~~A~~~~~ 148 (256)
T 2etb_A 73 GNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFF----QKHQGTCFYFGELPLSLAACTKQ 148 (256)
T ss_dssp TCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGG----SCCSSSCCCSCSSHHHHHHHTTC
T ss_pred cchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccc----cccccccccCCCCHHHHHHHcCC
Confidence 21 23467999999999999999999999999886652211000 00001112239999999999999
Q ss_pred HHHHHHHhc---CCCCCCCCCCCCCCCHHHHHHH--hChHH-------HHHHHHhhCCCC-------CcCCCCCccHHhH
Q 047844 141 LDVVKILLG---ADPAFPYSANGSGETPLYLAAA--RAHKE-------ISAEILQKCPSP-------AHEGPNGKTALHA 201 (264)
Q Consensus 141 ~~~~~~Ll~---~g~~~~~~~~~~g~t~Lh~A~~--~~~~~-------~~~~Ll~~ga~~-------~~~~~~g~tpl~~ 201 (264)
.+++++|++ .|+++ +.+|..|+||||+|+. .++.+ ++++|+++|+++ +.+|..|.||||+
T Consensus 149 ~~~v~~Ll~~~~~ga~~-n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~ 227 (256)
T 2etb_A 149 WDVVTYLLENPHQPASL-EATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKL 227 (256)
T ss_dssp HHHHHHHHHCSSCCCCT-TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHH
T ss_pred HHHHHHHHhccccCCCc-CccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHH
Confidence 999999999 89996 7899999999999999 78888 999999999999 8999999999999
Q ss_pred HHhcCChHHHHHHHhhhCC
Q 047844 202 AVCSRSCAASRCHKLHRSS 220 (264)
Q Consensus 202 A~~~~~~~~~~~l~~~~~~ 220 (264)
|+..|+.+++++|+.++..
T Consensus 228 A~~~g~~~~v~~Ll~~g~~ 246 (256)
T 2etb_A 228 AAKEGKIEIFRHILQREFS 246 (256)
T ss_dssp HHHTTCHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHhCCCC
Confidence 9999999999999998753
No 18
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1.1e-35 Score=221.63 Aligned_cols=155 Identities=26% Similarity=0.342 Sum_probs=96.4
Q ss_pred hhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhH
Q 047844 37 VLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAPLHVAARYGHAAVVEALIEIAKQESDQEIESGVEST 116 (264)
Q Consensus 37 ~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 116 (264)
+|+.|| +.|+ .+++++|++.|.+ ++.+|..|+||||+|+..++.+++++|++.|++++.
T Consensus 7 ~L~~Aa--~~G~--------~~~v~~Ll~~Gad-vn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~---------- 65 (169)
T 4gpm_A 7 RLIEAA--ENGN--------KDRVKDLIENGAD-VNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNA---------- 65 (169)
T ss_dssp HHHHHH--HTTC--------HHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC----------
T ss_pred HHHHHH--HcCC--------HHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhh----------
Confidence 466666 6666 6666666666666 556666666666666666666666666666655333
Q ss_pred HHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCc
Q 047844 117 ARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANGSGETPLYLAAARAHKEISAEILQKCPSPAHEGPNGK 196 (264)
Q Consensus 117 ~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 196 (264)
++..|.||||+|+..|+.+++++|++.|+++ +.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+
T Consensus 66 -------~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadv-n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~ 137 (169)
T 4gpm_A 66 -------KDSDGRTPLHHAAENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGR 137 (169)
T ss_dssp -------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred -------hccCCCCHHHHHHHcCCHHHHHHHHHCcCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCC
Confidence 5666666666666666666666666666664 55566666666666666666666666666666666666666
Q ss_pred cHHhHHHhcCChHHHHHHHhhhCC
Q 047844 197 TALHAAVCSRSCAASRCHKLHRSS 220 (264)
Q Consensus 197 tpl~~A~~~~~~~~~~~l~~~~~~ 220 (264)
|||++|+.+++.+++++|+.+|+.
T Consensus 138 TpL~~A~~~g~~~iv~~Ll~~GA~ 161 (169)
T 4gpm_A 138 TPLDLAREHGNEEVVKLLEKQGGW 161 (169)
T ss_dssp CHHHHHHHTTCHHHHHHHHTC---
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCC
Confidence 666666666666666666666553
No 19
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=1.7e-35 Score=247.11 Aligned_cols=205 Identities=15% Similarity=0.161 Sum_probs=172.5
Q ss_pred CcHHHHHHHcCCchHHhhhhhhcccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChH
Q 047844 2 NSDLYEAAAKGEIEPFNQLAIDRQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAP 81 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~ 81 (264)
.||||+||..|+.+++++|++.+...+..|..|.||||+|+ ..|+ .+++++|++.+.+. .+.+|.||
T Consensus 21 ~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~--~~g~--------~~~v~~Ll~~g~~~---~~~~g~t~ 87 (364)
T 3ljn_A 21 MEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLAC--KFGC--------VDTAKYLASVGEVH---SLWHGQKP 87 (364)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH--HHCC--------HHHHHHHHHHCCCC---CCBTTBCH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHH--HcCC--------HHHHHHHHHCCCCc---cccCCCCH
Confidence 37999999999999999999944344458899999999999 9999 99999999999852 34578899
Q ss_pred HHHHHHhCCHHHHHHHHHH----hhhcch-----------------h----------hhhhc--hhhHHHHH------hc
Q 047844 82 LHVAARYGHAAVVEALIEI----AKQESD-----------------Q----------EIESG--VESTARHM------LG 122 (264)
Q Consensus 82 L~~A~~~g~~~~v~~Ll~~----~~~~~~-----------------~----------~~~~~--~~~~~~~~------l~ 122 (264)
||+|+..|+.+++++|++. +..++. . ....+ ....+..+ ++
T Consensus 88 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~ 167 (364)
T 3ljn_A 88 IHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPT 167 (364)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTT
T ss_pred HHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCc
Confidence 9999999999999999988 333322 1 11222 33334433 35
Q ss_pred CCCCCCCChhhHHHhcCCHHHHHHHhcCCCC-----CCCCCCCCCCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCcc
Q 047844 123 MKNDEEDTALHEAVQSGSLDVVKILLGADPA-----FPYSANGSGETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKT 197 (264)
Q Consensus 123 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-----~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~t 197 (264)
.++..|.||||+|+..|+.+++++|++.|++ + +..|..|+||||+|+..|+.+++++|+++|++++.+|..|.|
T Consensus 168 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t 246 (364)
T 3ljn_A 168 AKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRL-DYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTV 246 (364)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCT-TCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccc-cccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC
Confidence 6888999999999999999999999999888 5 678899999999999999999999999999999999999999
Q ss_pred HHhHHHhcCChHHHHHHHhhhCC
Q 047844 198 ALHAAVCSRSCAASRCHKLHRSS 220 (264)
Q Consensus 198 pl~~A~~~~~~~~~~~l~~~~~~ 220 (264)
|||+|+..++.+++++|+.+++.
T Consensus 247 pL~~A~~~g~~~~v~~Ll~~~~~ 269 (364)
T 3ljn_A 247 PLYLSVRAAMVLLTKELLQKTDV 269 (364)
T ss_dssp HHHHHHHTCCHHHHHHHHHHSCH
T ss_pred HHHHHHHhChHHHHHHHHHcCCc
Confidence 99999999999999999998653
No 20
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=6.8e-36 Score=241.55 Aligned_cols=193 Identities=15% Similarity=0.074 Sum_probs=173.5
Q ss_pred CcHHHHHHHcCCchHHhhhhhhcccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChH
Q 047844 2 NSDLYEAAAKGEIEPFNQLAIDRQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAP 81 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~ 81 (264)
.||||+|+..|+.+++++|++.+... ...+|.||||+|+ ..|+ .+++++|++.+.+ ++..|..|+||
T Consensus 32 ~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~~g~t~L~~A~--~~g~--------~~~v~~Ll~~ga~-~~~~d~~g~t~ 98 (285)
T 3kea_A 32 HSASYYAIADNNVRLVCTLLNAGALK--NLLENEFPLHQAA--TLED--------TKIVKILLFSGLD-DSQFDDKGNTA 98 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTGGG--SCCTTCCHHHHHT--TSSS--------CHHHHHHHHTTCC-TTCCCTTSCCH
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCC--CCCCCCCHHHHHH--HcCC--------HHHHHHHHHCCCC-CCCcCCCCCcH
Confidence 58999999999999999999943222 2235999999999 9999 9999999999999 78899999999
Q ss_pred HHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCC-CChhhHHHhcCCHHHHHHHhcCCCCCCCCCCC
Q 047844 82 LHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEE-DTALHEAVQSGSLDVVKILLGADPAFPYSANG 160 (264)
Q Consensus 82 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g-~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~ 160 (264)
||+|+..|+.+++++|++.|++++. ++..| .||||+|+..|+.+++++|++.|++... ..
T Consensus 99 L~~A~~~g~~~~v~~Ll~~ga~~~~-----------------~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~ 159 (285)
T 3kea_A 99 LYYAVDSGNMQTVKLFVKKNWRLMF-----------------YGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFD--LA 159 (285)
T ss_dssp HHHHHHTTCHHHHHHHHHHCGGGGG-----------------CSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCC--CS
T ss_pred HHHHHHcCCHHHHHHHHhcCCCCCc-----------------cCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcccc--cc
Confidence 9999999999999999999998655 88888 7999999999999999999999987521 22
Q ss_pred CCCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccH-HhHHHhcCChHHHHHHHhhhCCCCCCCC
Q 047844 161 SGETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKTA-LHAAVCSRSCAASRCHKLHRSSRFLPSP 226 (264)
Q Consensus 161 ~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tp-l~~A~~~~~~~~~~~l~~~~~~~~~~~~ 226 (264)
.|+||||+|+..|+.+++++|+++|++++.++..|+|| ||+|+..++.+++++|+.+++.......
T Consensus 160 ~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~ 226 (285)
T 3kea_A 160 ILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANL 226 (285)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG
T ss_pred CCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh
Confidence 89999999999999999999999999999999999998 9999999999999999999886555443
No 21
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=4e-35 Score=218.58 Aligned_cols=125 Identities=27% Similarity=0.403 Sum_probs=84.1
Q ss_pred hhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhH
Q 047844 37 VLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAPLHVAARYGHAAVVEALIEIAKQESDQEIESGVEST 116 (264)
Q Consensus 37 ~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 116 (264)
|||+|+ ..++ .+++++|++.+.+ ++.+|..|+||||+|+..|+.+++++|++.|++++.
T Consensus 40 ~l~~a~--~~~~--------~~~~~~ll~~gad-~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~---------- 98 (169)
T 4gpm_A 40 PLHHAA--ENGH--------KEVVKLLISKGAD-VNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNA---------- 98 (169)
T ss_dssp HHHHHH--HTTC--------HHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC----------
T ss_pred HHHHHH--HcCC--------HHHHHHHHhcccc-hhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCC----------
Confidence 577777 7777 7777777777766 566677777777777777777777777777666433
Q ss_pred HHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHhhCCCCCc
Q 047844 117 ARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANGSGETPLYLAAARAHKEISAEILQKCPSPAH 190 (264)
Q Consensus 117 ~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~ 190 (264)
+|..|.||||+|+..|+.+++++|++.|+++ +.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 99 -------~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~-~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 99 -------KDSDGRTPLHHAAENGHKEVVKLLISKGADV-NTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp -------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHTC------
T ss_pred -------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCC
Confidence 6667777777777777777777777777764 56667777777777777777777777777776654
No 22
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=1.3e-35 Score=238.41 Aligned_cols=205 Identities=16% Similarity=0.105 Sum_probs=169.3
Q ss_pred CcHHHHHHHcCCchHHhhhhhh---cc-ccc----ccCCCCCchhHHHHHHhh---hcCcCCCcccHHHHHHHHHhCCcc
Q 047844 2 NSDLYEAAAKGEIEPFNQLAID---RQ-LGS----LVTHKKNTVLHVNIIASY---TQNKEGESVSTKFVERIIEMCPSL 70 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~---~~-~~~----~~~~~g~t~L~~A~~~~~---g~~~~~~~~~~~~~~~ll~~~~~~ 70 (264)
.||||+||..|+.++|+.|++. .. ... ..+..|.||||+|+ .. |+ .+++++|++.+.+.
T Consensus 14 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~--~~~~~g~--------~~~v~~Ll~~ga~~ 83 (273)
T 2pnn_A 14 RRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAM--LNLHNGQ--------NDTIALLLDVARKT 83 (273)
T ss_dssp HHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHH--HSCBTTB--------CHHHHHHHHHHHHT
T ss_pred chHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHH--HHHhcCC--------hHHHHHHHHhhccc
Confidence 4899999999999999999971 11 111 24789999999999 87 99 99999999987542
Q ss_pred ------ce----ecCCCCChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCC
Q 047844 71 ------LL----QVNAKGDAPLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGS 140 (264)
Q Consensus 71 ------~~----~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~ 140 (264)
++ ..|..|+||||+|+..|+.+++++|+++|++++..+..... .....+..+..|.||||+|+..|+
T Consensus 84 ~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~---~~~~~~~~~~~g~tpL~~A~~~g~ 160 (273)
T 2pnn_A 84 DSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFF---KKTKGRPGFYFGELPLSLAACTNQ 160 (273)
T ss_dssp TCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGG---SSCSSSCCCCSCBSHHHHHHHTTC
T ss_pred cchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCcccccccc---ccccccccccCCCCHHHHHHHcCC
Confidence 12 25678999999999999999999999999887652210000 000011222379999999999999
Q ss_pred HHHHHHHhc---CCCCCCCCCCCCCCCHHHHHHHhCh---------HHHHHHHHhhCCCCC-------cCCCCCccHHhH
Q 047844 141 LDVVKILLG---ADPAFPYSANGSGETPLYLAAARAH---------KEISAEILQKCPSPA-------HEGPNGKTALHA 201 (264)
Q Consensus 141 ~~~~~~Ll~---~g~~~~~~~~~~g~t~Lh~A~~~~~---------~~~~~~Ll~~ga~~~-------~~~~~g~tpl~~ 201 (264)
.+++++|++ .|+++ +.+|..|+||||+|+..++ .+++++|+++|++++ .+|..|.||||+
T Consensus 161 ~~~v~~Ll~~~~~gad~-~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~ 239 (273)
T 2pnn_A 161 LAIVKFLLQNSWQPADI-SARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLAL 239 (273)
T ss_dssp HHHHHHHHHCSSCCCCT-TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHH
T ss_pred HHHHHHHHhcccCCCCc-eeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHH
Confidence 999999999 89996 7899999999999999887 899999999999986 489999999999
Q ss_pred HHhcCChHHHHHHHhhhCC
Q 047844 202 AVCSRSCAASRCHKLHRSS 220 (264)
Q Consensus 202 A~~~~~~~~~~~l~~~~~~ 220 (264)
|+..|+.+++++|+.+++.
T Consensus 240 A~~~g~~~iv~~Ll~~ga~ 258 (273)
T 2pnn_A 240 AASSGKIGVLAYILQREIH 258 (273)
T ss_dssp HHHTTCHHHHHHHHHHHTC
T ss_pred HHHhChHHHHHHHHHCCCC
Confidence 9999999999999999974
No 23
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=7.4e-35 Score=229.02 Aligned_cols=187 Identities=22% Similarity=0.256 Sum_probs=172.1
Q ss_pred CcHHHHHHHcCCchHHhhhhhhcccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChH
Q 047844 2 NSDLYEAAAKGEIEPFNQLAIDRQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAP 81 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~ 81 (264)
.||||+|+..|+.+++++|++.+...+..+..|.||||.|+ ..|+ .+++++|++.++..++..+..|.||
T Consensus 45 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~~~--------~~~~~~Ll~~~~~~~~~~~~~g~t~ 114 (237)
T 3b7b_A 45 RTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAA--KKGH--------YEVVQYLLSNGQMDVNCQDDGGWTP 114 (237)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHH--HTTC--------HHHHHHHHTTTCCCTTCCCTTSCCH
T ss_pred CCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHH--HcCC--------HHHHHHHHhCCCCCcccCCCCCCCH
Confidence 47999999999999999999955444558899999999999 9999 9999999999965588899999999
Q ss_pred HHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCC
Q 047844 82 LHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANGS 161 (264)
Q Consensus 82 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~ 161 (264)
||+|+..|+.+++++|++.|++++. ++..|.||||+|+..|+.+++++|++.|+++ +..|..
T Consensus 115 L~~A~~~~~~~~~~~Ll~~g~~~~~-----------------~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~ 176 (237)
T 3b7b_A 115 MIWATEYKHVDLVKLLLSKGSDINI-----------------RDNEENICLHWAAFSGCVDIAEILLAAKCDL-HAVNIH 176 (237)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTC-----------------CCTTSCCHHHHHHHHCCHHHHHHHHTTTCCT-TCCCTT
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCc-----------------cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCcCCC
Confidence 9999999999999999999988544 8899999999999999999999999999996 788999
Q ss_pred CCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCChHHHHHHHh
Q 047844 162 GETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRSCAASRCHKL 216 (264)
Q Consensus 162 g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~ 216 (264)
|.||||+|+..++.+++++|+++|++++.+|..|.||+|+|+.+++.+.+..+..
T Consensus 177 g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~~~~~l~~ 231 (237)
T 3b7b_A 177 GDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMSK 231 (237)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCHHHHHHHHHH
T ss_pred CCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999877665543
No 24
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=2.1e-34 Score=238.66 Aligned_cols=209 Identities=21% Similarity=0.159 Sum_probs=173.1
Q ss_pred CcHHHHHHHcCCchHHhhhhhhcccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChH
Q 047844 2 NSDLYEAAAKGEIEPFNQLAIDRQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAP 81 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~ 81 (264)
.||||+|+..|+.+++++|++.+...+..+..|.||||+|+ ..|+ .+++++|++.+.+ ++..+..|.||
T Consensus 59 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~g~--------~~iv~~Ll~~g~~-~~~~~~~g~t~ 127 (351)
T 3utm_A 59 STPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNAC--SYGH--------YEVTELLLKHGAC-VNAMDLWQFTP 127 (351)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH--HTTC--------HHHHHHHHHTTCC-TTCCCTTCCCH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHH--HCCC--------HHHHHHHHHCCCC-CCCCCCCCCCH
Confidence 47899999999999999999844444447888999999999 9999 9999999998888 77888889999
Q ss_pred HHHHHHhCCHHHHHHHHHHhhhcchhhhhhchh-------------------------------hHHHHHh------cCC
Q 047844 82 LHVAARYGHAAVVEALIEIAKQESDQEIESGVE-------------------------------STARHML------GMK 124 (264)
Q Consensus 82 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~-------------------------------~~~~~~l------~~~ 124 (264)
||+|+..|+.+++++|+++|+++...+...... .....++ ...
T Consensus 128 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 207 (351)
T 3utm_A 128 LHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQ 207 (351)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccC
Confidence 999999999999999999887765432111000 0011111 135
Q ss_pred CCCCCChhhHHHhc---CCHHHHHHHhcCCCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccHHhH
Q 047844 125 NDEEDTALHEAVQS---GSLDVVKILLGADPAFPYSANGSGETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKTALHA 201 (264)
Q Consensus 125 ~~~g~t~L~~A~~~---~~~~~~~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~ 201 (264)
+..|.||||+|+.. +..+++++|++.|+++ +.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+
T Consensus 208 ~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~ 286 (351)
T 3utm_A 208 PQSHETALHCAVASLHPKRKQVAELLLRKGANV-NEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHR 286 (351)
T ss_dssp TTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCc-CCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHH
Confidence 57789999999999 5689999999999996 7889999999999999999999999999999999999999999999
Q ss_pred HHhcCChHHHHHHHhhhCCCC
Q 047844 202 AVCSRSCAASRCHKLHRSSRF 222 (264)
Q Consensus 202 A~~~~~~~~~~~l~~~~~~~~ 222 (264)
|+..++.+++++|+.+++...
T Consensus 287 A~~~~~~~~v~~Ll~~gad~~ 307 (351)
T 3utm_A 287 AALAGHLQTCRLLLSYGSDPS 307 (351)
T ss_dssp HHHHTCHHHHHHHHHTTCCTT
T ss_pred HHHcCcHHHHHHHHHcCCCCC
Confidence 999999999999999987543
No 25
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1e-35 Score=238.41 Aligned_cols=182 Identities=19% Similarity=0.211 Sum_probs=147.6
Q ss_pred CcHHHHHHHcCCch-HHhhhhhhcccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCCh
Q 047844 2 NSDLYEAAAKGEIE-PFNQLAIDRQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDA 80 (264)
Q Consensus 2 ~~~l~~A~~~g~~~-~~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t 80 (264)
.+||++|+..++.+ +++.|++.+-..+..|.+|.||||+|+ ..|+ .+++++|++.+++ ++..+..|.|
T Consensus 53 ~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~A~--~~g~--------~~~v~~Ll~~~a~-~~~~~~~g~t 121 (269)
T 4b93_B 53 CHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLHVAA--LHGR--------ADLIPLLLKHGAN-AGARNADQAV 121 (269)
T ss_dssp ----------------------CCCCTTCCCTTSCCHHHHHH--HTTC--------TTHHHHHHHTTCC-TTCCCTTCCC
T ss_pred CCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHH--HcCc--------HHHHHHHHhcCCC-cCccCCCCCC
Confidence 47899999988764 788888843334448999999999999 9999 9999999999998 7889999999
Q ss_pred HHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCC
Q 047844 81 PLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANG 160 (264)
Q Consensus 81 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~ 160 (264)
|+++|+..++.+++++|++.|++++. +|..|.||||+|+..|+.+++++|++.|+++ +..+.
T Consensus 122 ~l~~a~~~~~~~~~~~Ll~~g~~~n~-----------------~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadv-n~~~~ 183 (269)
T 4b93_B 122 PLHLACQQGHFQVVKCLLDSNAKPNK-----------------KDLSGNTPLIYACSGGHHELVALLLQHGASI-NASNN 183 (269)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCSCC-----------------CCTTCCCHHHHHHHTTCGGGHHHHHHTTCCT-TCBCT
T ss_pred ccccccccChHHHHHHHHHCCCCCCC-----------------CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCC-Ccccc
Confidence 99999999999999999999988654 8999999999999999999999999999996 78899
Q ss_pred CCCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCChHHHHHH
Q 047844 161 SGETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRSCAASRCH 214 (264)
Q Consensus 161 ~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l 214 (264)
.|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.+++ ++++|
T Consensus 184 ~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~--i~~lL 235 (269)
T 4b93_B 184 KGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSK--IMELL 235 (269)
T ss_dssp TSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCH--HHHHT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCc--HHHHH
Confidence 99999999999999999999999999999999999999999988764 44444
No 26
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=3.9e-35 Score=234.18 Aligned_cols=186 Identities=20% Similarity=0.170 Sum_probs=167.2
Q ss_pred CcHHHHHHHcCCchHHhhhhhhcccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChH
Q 047844 2 NSDLYEAAAKGEIEPFNQLAIDRQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAP 81 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~ 81 (264)
.||||+|+..|+.+++++|++.+...+..|..|.||||+|+ ..|+ .+++++|++.+.+ ++ .+..|.||
T Consensus 37 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~~~--------~~~v~~Ll~~g~~-~~-~~~~g~t~ 104 (261)
T 2xai_A 37 VSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNAC--VSGS--------WDCVNLLLQHGAS-VQ-PESDLASP 104 (261)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH--HHTC--------HHHHHHHHHTTCC-SS-CSCTTCCH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH--HcCC--------HHHHHHHHHCCCC-CC-CCCCCCCH
Confidence 58999999999999999999944444558999999999999 9999 9999999999988 43 35669999
Q ss_pred HHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCC
Q 047844 82 LHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANGS 161 (264)
Q Consensus 82 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~ 161 (264)
||+|+..|+.+++++|++.|++++. ++..|.||||+|+..|+.+++++|++.|+++. .+..
T Consensus 105 L~~A~~~~~~~~v~~Ll~~g~~~~~-----------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~ 165 (261)
T 2xai_A 105 IHEAARRGHVECVNSLIAYGGNIDH-----------------KISHLGTPLYLACENQQRACVKKLLESGADVN--QGKG 165 (261)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTC-----------------CBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTT--CCBT
T ss_pred HHHHHHcCcHHHHHHHHHcCCCCCc-----------------CCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCC--CCCC
Confidence 9999999999999999999988544 88999999999999999999999999999963 4889
Q ss_pred CCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCChHHHHHHHhhhCC
Q 047844 162 GETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRSCAASRCHKLHRSS 220 (264)
Q Consensus 162 g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~ 220 (264)
|+||||+|+..++.+++++|+++|++++.+|..|+||+++|+.++ ++++.++.++.+
T Consensus 166 g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~~--~~~~~ll~~~~~ 222 (261)
T 2xai_A 166 QDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPES--PLAQLFLEREGP 222 (261)
T ss_dssp TBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTTC--THHHHHHHC-CC
T ss_pred CCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhccccc--cHHHHHHhccCC
Confidence 999999999999999999999999999999999999999999655 588888887544
No 27
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=2.4e-34 Score=233.76 Aligned_cols=190 Identities=23% Similarity=0.174 Sum_probs=140.7
Q ss_pred CcHHHHHHHcCCchHHhhhhhhcccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChH
Q 047844 2 NSDLYEAAAKGEIEPFNQLAIDRQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAP 81 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~ 81 (264)
.||||.||..|+++++++|++.+...+..+..|.||||+|+ ..|+ .+++++|++.+.+ ++..|..|+||
T Consensus 41 ~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~g~--------~~~v~~Ll~~ga~-~~~~~~~g~tp 109 (299)
T 1s70_B 41 GAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQAC--IDDN--------VDMVKFLVENGAN-INQPDNEGWIP 109 (299)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHH--HTTC--------HHHHHHHHHTTCC-TTCCCTTSCCH
T ss_pred ccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHH--HcCC--------HHHHHHHHHCCCC-CCCCCCCCCcH
Confidence 37899999999999999999944444558999999999999 9999 9999999999998 78899999999
Q ss_pred HHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcC-CC--------
Q 047844 82 LHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGA-DP-------- 152 (264)
Q Consensus 82 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~-------- 152 (264)
||+|+..|+.+++++|+++|++++. .+..|.||||+|+..++.+++++++.. |.
T Consensus 110 L~~A~~~g~~~~v~~Ll~~g~~~~~-----------------~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~ 172 (299)
T 1s70_B 110 LHAAASCGYLDIAEYLISQGAHVGA-----------------VNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKE 172 (299)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTC-----------------CCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHhCCCCCCC-----------------cCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhh
Confidence 9999999999999999999988654 555666666666666666655554431 11
Q ss_pred -----------------CCCCCCCCCCCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCChHHHHHHH
Q 047844 153 -----------------AFPYSANGSGETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRSCAASRCHK 215 (264)
Q Consensus 153 -----------------~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~ 215 (264)
......+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+
T Consensus 173 ~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll 252 (299)
T 1s70_B 173 EERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILV 252 (299)
T ss_dssp HHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred hhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHH
Confidence 111223445666666666666666666666666666666666666666666666666666666
Q ss_pred hhhC
Q 047844 216 LHRS 219 (264)
Q Consensus 216 ~~~~ 219 (264)
.+++
T Consensus 253 ~~ga 256 (299)
T 1s70_B 253 ENLC 256 (299)
T ss_dssp HTTC
T ss_pred HcCC
Confidence 6554
No 28
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=9e-34 Score=228.24 Aligned_cols=192 Identities=19% Similarity=0.168 Sum_probs=171.4
Q ss_pred CcHHHHHHHcCCchHHhhhhhhcccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceec-------
Q 047844 2 NSDLYEAAAKGEIEPFNQLAIDRQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQV------- 74 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~------- 74 (264)
.||||+|+..|+.+++++|++.+...+..+..|.||||.|+ ..|+ .+++++|++.+.+ ++..
T Consensus 73 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~~~--------~~~~~~Ll~~g~~-~~~~~~~~~~~ 141 (285)
T 1wdy_A 73 ATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAA--VYGK--------VKALKFLYKRGAN-VNLRRKTKEDQ 141 (285)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHH--HTTC--------HHHHHHHHHTTCC-TTCCCCCCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHH--HhCC--------HHHHHHHHHhCCC-cccccccHHHH
Confidence 47888888888888888888844344447888999999999 9999 9999999999887 4444
Q ss_pred ---CCCCChHHHHHHHhCCHHHHHHHHHH-hhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCC----HHHHHH
Q 047844 75 ---NAKGDAPLHVAARYGHAAVVEALIEI-AKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGS----LDVVKI 146 (264)
Q Consensus 75 ---~~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~----~~~~~~ 146 (264)
+..|.||||+|+..|+.+++++|++. |.+++ ..+..|.||||+|+..++ .+++++
T Consensus 142 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~-----------------~~~~~g~t~l~~a~~~~~~~~~~~i~~~ 204 (285)
T 1wdy_A 142 ERLRKGGATALMDAAEKGHVEVLKILLDEMGADVN-----------------ACDNMGRNALIHALLSSDDSDVEAITHL 204 (285)
T ss_dssp HHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTT-----------------CCCTTSCCHHHHHHHCSCTTTHHHHHHH
T ss_pred HhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCC-----------------ccCCCCCCHHHHHHHccccchHHHHHHH
Confidence 77899999999999999999999987 77644 488999999999999999 999999
Q ss_pred HhcCCCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHh-hCCCCCcCCCCCccHHhHHHhcCChHHHHHHHhhhCCCC
Q 047844 147 LLGADPAFPYSANGSGETPLYLAAARAHKEISAEILQ-KCPSPAHEGPNGKTALHAAVCSRSCAASRCHKLHRSSRF 222 (264)
Q Consensus 147 Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~-~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~~~ 222 (264)
|++.|+++ +.+|..|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..++.+++++|+.+++...
T Consensus 205 Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~ 280 (285)
T 1wdy_A 205 LLDHGADV-NVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTD 280 (285)
T ss_dssp HHHTTCCS-SCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSC
T ss_pred HHHcCCCC-CCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCC
Confidence 99999995 7889999999999999999999999999 899999999999999999999999999999999987643
No 29
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.1e-34 Score=231.85 Aligned_cols=183 Identities=20% Similarity=0.174 Sum_probs=167.0
Q ss_pred CcHHHHHHHcCCchHHhhhhhhcccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChH
Q 047844 2 NSDLYEAAAKGEIEPFNQLAIDRQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAP 81 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~ 81 (264)
.||||+|+..|+.+++++|++.+...+..|..|.||||+|+ ..|+ .+++++|++.+.+ ++. +..|.||
T Consensus 93 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~--~~~~--------~~~v~~Ll~~g~~-~~~-~~~g~t~ 160 (285)
T 3d9h_A 93 VSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNAC--VSGS--------WDCVNLLLQHGAS-VQP-ESDLASP 160 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHH--HHTC--------HHHHHHHHHTTCC-SSC-SCTTSCH
T ss_pred CCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHH--HcCH--------HHHHHHHHHCCCC-CCC-CCCCCCH
Confidence 58999999999999999999954444558999999999999 9999 9999999999988 443 4569999
Q ss_pred HHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCC
Q 047844 82 LHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANGS 161 (264)
Q Consensus 82 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~ 161 (264)
||+|+..|+.+++++|++.|++++. ++..|.||||+|+..|+.+++++|++.|+++. .+..
T Consensus 161 L~~A~~~g~~~~v~~Ll~~g~~~~~-----------------~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~--~~~~ 221 (285)
T 3d9h_A 161 IHEAARRGHVECVNSLIAYGGNIDH-----------------KISHLGTPLYLACENQQRACVKKLLESGADVN--QGKG 221 (285)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTC-----------------CBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTT--CCBT
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCC-----------------cCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCC--CCCC
Confidence 9999999999999999999987544 88999999999999999999999999999963 4889
Q ss_pred CCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCChHHHHHHHhh
Q 047844 162 GETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRSCAASRCHKLH 217 (264)
Q Consensus 162 g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~ 217 (264)
|+||||+|+..++.+++++|+++|++++.+|..|+||+++|+ ++.+++++|+.+
T Consensus 222 g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~ 275 (285)
T 3d9h_A 222 QDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVP--PESPLAQLFLER 275 (285)
T ss_dssp TBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSC--TTSHHHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhc--CccHHHHHHHHh
Confidence 999999999999999999999999999999999999999999 457899999887
No 30
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=2.9e-34 Score=224.30 Aligned_cols=183 Identities=21% Similarity=0.192 Sum_probs=165.1
Q ss_pred CcHHHHHHHcCCchHHhhhhhh---cccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhC--CccceecCC
Q 047844 2 NSDLYEAAAKGEIEPFNQLAID---RQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMC--PSLLLQVNA 76 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~---~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~--~~~~~~~~~ 76 (264)
.||||+|+..|+.+++++|++. .+.....+..|.||||+|+ ..|+ .+++++|++.+ .+ ++..+.
T Consensus 37 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~--~~~~--------~~~~~~Ll~~g~~~~-~~~~~~ 105 (228)
T 2dzn_A 37 RIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIAC--SVGN--------LEVVKSLYDRPLKPD-LNKITN 105 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHH--HHCC--------HHHHHHHHSSSSCCC-TTCCCT
T ss_pred CCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHH--HcCC--------HHHHHHHHhCCCCcc-cccCCc
Confidence 5899999999999999999993 3433236789999999999 9999 99999999998 55 788899
Q ss_pred CCChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCC-CCCC
Q 047844 77 KGDAPLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGAD-PAFP 155 (264)
Q Consensus 77 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~ 155 (264)
.|.||||+|+..|+.+++++|++.|++++. ++..|.||||+|+..|+.+++++|++.| ++ .
T Consensus 106 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-----------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~ 167 (228)
T 2dzn_A 106 QGVTCLHLAVGKKWFEVSQFLIENGASVRI-----------------KDKFNQIPLHRAASVGSLKLIELLCGLGKSA-V 167 (228)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCSCC-----------------CCTTSCCHHHHHHHTTCHHHHHHHHTTTCCC-S
T ss_pred CCCCHHHHHHHcCCHhHHHHHHHcCCCccc-----------------cCCCCCCHHHHHHHcCCHHHHHHHHhcCccc-c
Confidence 999999999999999999999999988554 8899999999999999999999999999 66 4
Q ss_pred CCCCCCCCCHHHHHHHhChHHHHHHHH-hhCCCCCcCCCCCccHHhHHHhcCChHHHHHHHh
Q 047844 156 YSANGSGETPLYLAAARAHKEISAEIL-QKCPSPAHEGPNGKTALHAAVCSRSCAASRCHKL 216 (264)
Q Consensus 156 ~~~~~~g~t~Lh~A~~~~~~~~~~~Ll-~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~ 216 (264)
+..|..|+||||+|+..++.+++++|+ ++|++++.+|..|.||+++|+.. +++++++.
T Consensus 168 ~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~---~~~~~l~~ 226 (228)
T 2dzn_A 168 NWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE---QVKKFFLN 226 (228)
T ss_dssp CCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSST---THHHHHHT
T ss_pred cCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHH---HHHHHHHh
Confidence 788999999999999999999999999 89999999999999999999765 45565544
No 31
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=2.5e-34 Score=240.92 Aligned_cols=198 Identities=18% Similarity=0.179 Sum_probs=175.4
Q ss_pred CcHHHHHHHcCCchHHhhhhhhcccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhC---CccceecCCCC
Q 047844 2 NSDLYEAAAKGEIEPFNQLAIDRQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMC---PSLLLQVNAKG 78 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~---~~~~~~~~~~g 78 (264)
.||||+|+..|+.+++++|++.+...+..+..|.||||+|+ ..|+ .+++++|++.+ .+ ++..|..|
T Consensus 167 ~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~--~~g~--------~~~v~~Ll~~~~~~~~-~~~~d~~g 235 (373)
T 2fo1_E 167 NTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAA--ANRD--------FGMMVYMLNSTKLKGD-IEELDRNG 235 (373)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHH--HTTC--------HHHHHHHTTSHHHHHT-TSCCCTTS
T ss_pred CCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHH--HCCC--------HHHHHHHHhcCccccC-hhhcCCCC
Confidence 58999999999999999999944444458999999999999 9999 99999999987 45 77889999
Q ss_pred ChHHHHHHHhC---CHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCC-CCC
Q 047844 79 DAPLHVAARYG---HAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGAD-PAF 154 (264)
Q Consensus 79 ~t~L~~A~~~g---~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~ 154 (264)
.||||+|+..+ +.+++++|++.|++++.... ...+..+..|.||||+|+..|+.+++++|++.+ +++
T Consensus 236 ~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~---------~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~ 306 (373)
T 2fo1_E 236 MTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGA---------ARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNK 306 (373)
T ss_dssp CCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSG---------GGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCT
T ss_pred CCHHHHHHHhCCcchHHHHHHHHHCCCCcccccc---------cccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCc
Confidence 99999999998 89999999999988754211 112346779999999999999999999999876 674
Q ss_pred CCCCCCCCCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCChHHHHHHHhhhCC
Q 047844 155 PYSANGSGETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRSCAASRCHKLHRSS 220 (264)
Q Consensus 155 ~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~ 220 (264)
+..|..|+||||+|+..|+.+++++|+++|++++.+|..|.|||++|+.+++.+++++|+.+++.
T Consensus 307 -n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 307 -DKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPE 371 (373)
T ss_dssp -TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC--
T ss_pred -cCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 78999999999999999999999999999999999999999999999999999999999988654
No 32
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.5e-33 Score=240.89 Aligned_cols=207 Identities=24% Similarity=0.257 Sum_probs=158.7
Q ss_pred CcHHHHHHHcCCchHHhhhhhhcccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChH
Q 047844 2 NSDLYEAAAKGEIEPFNQLAIDRQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAP 81 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~ 81 (264)
.||||+||..|+++++++|++.+...+..+..|.||||.|+ ..|+ .+++++|++.+.+ ++..+..|+||
T Consensus 15 ~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~--~~g~--------~~~v~~Ll~~g~~-~~~~~~~g~t~ 83 (437)
T 1n11_A 15 LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAA--RAGH--------TEVAKYLLQNKAK-VNAKAKDDQTP 83 (437)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHH--HHTC--------HHHHHHHHHHTCC-SSCCCTTSCCH
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH--HcCC--------HHHHHHHHhCCCC-CCCCCCCCCCH
Confidence 48999999999999999999944444447889999999999 9999 9999999999998 78899999999
Q ss_pred HHHHHHhCCHHHHHHHHHHhhhcchhhhh----------hchhhHHHHHh------cCCCCCCCChhhHHHhcCCHHHHH
Q 047844 82 LHVAARYGHAAVVEALIEIAKQESDQEIE----------SGVESTARHML------GMKNDEEDTALHEAVQSGSLDVVK 145 (264)
Q Consensus 82 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~----------~~~~~~~~~~l------~~~~~~g~t~L~~A~~~~~~~~~~ 145 (264)
||+|+..|+.+++++|+++|++++..+.. .+....+..++ +..+..|.||||+|+..|+.++++
T Consensus 84 L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~ 163 (437)
T 1n11_A 84 LHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAE 163 (437)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHH
Confidence 99999999999999999999886653221 11122222222 234556777777777777777777
Q ss_pred HHhcCCCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCChHHHHHHHhhhCC
Q 047844 146 ILLGADPAFPYSANGSGETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRSCAASRCHKLHRSS 220 (264)
Q Consensus 146 ~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~ 220 (264)
+|+++|+++ +..+..|.||||+|+..++.+++++|++.|++++..+..|.||||+|+..++.+++++|+.++..
T Consensus 164 ~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~ 237 (437)
T 1n11_A 164 LLLERDAHP-NAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGS 237 (437)
T ss_dssp HHHHTTCCT-TCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHhCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 777777764 56666777777777777777777777777777777777777777777777777777777766543
No 33
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.1e-33 Score=241.74 Aligned_cols=207 Identities=20% Similarity=0.210 Sum_probs=139.1
Q ss_pred cHHHHHHHcCCchHHhhhhhhcccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChHH
Q 047844 3 SDLYEAAAKGEIEPFNQLAIDRQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAPL 82 (264)
Q Consensus 3 ~~l~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L 82 (264)
||||+|+..|+.+++++|++.....+..+..|.||||.|+ ..|+ .+++++|++.+.+ ++..+..|.|||
T Consensus 148 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~~~--------~~~v~~Ll~~g~~-~~~~~~~g~t~L 216 (437)
T 1n11_A 148 TPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAV--HHNN--------LDIVKLLLPRGGS-PHSPAWNGYTPL 216 (437)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHH--HTTC--------HHHHHHHGGGTCC-SCCCCTTCCCHH
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHH--HcCC--------HHHHHHHHhCCCC-CCCcCCCCCCHH
Confidence 6777777777777777777633333335666777777777 7777 7777777776666 555666667777
Q ss_pred HHHHHhCCHHHHHHHHHHhhhcchhhh----------hhchhhHHHHHh------cCCCCCCCChhhHHHhcCCHHHHHH
Q 047844 83 HVAARYGHAAVVEALIEIAKQESDQEI----------ESGVESTARHML------GMKNDEEDTALHEAVQSGSLDVVKI 146 (264)
Q Consensus 83 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~----------~~~~~~~~~~~l------~~~~~~g~t~L~~A~~~~~~~~~~~ 146 (264)
|+|+..|+.+++++|++.|++++..+. ..+.......++ +..+..|.||||+|+..|+.+++++
T Consensus 217 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ 296 (437)
T 1n11_A 217 HIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADV 296 (437)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHH
Confidence 777777777777777766655443321 111222222222 3456677777777777777777777
Q ss_pred HhcCCCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCChHHHHHHHhhhCCC
Q 047844 147 LLGADPAFPYSANGSGETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRSCAASRCHKLHRSSR 221 (264)
Q Consensus 147 Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~~ 221 (264)
|++.|+++ +..+..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.+++++|+.+++..
T Consensus 297 Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~ 370 (437)
T 1n11_A 297 LIKHGVMV-DATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASP 370 (437)
T ss_dssp HHHHTCCT-TCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS
T ss_pred HHhCCccC-CCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCC
Confidence 77777774 566777777777777777777777777777777777777777777777777777777777776543
No 34
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=3.1e-33 Score=225.09 Aligned_cols=206 Identities=18% Similarity=0.236 Sum_probs=161.4
Q ss_pred CcHHHHHHHcCCchHHhhhhhhccccccc-CCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCCh
Q 047844 2 NSDLYEAAAKGEIEPFNQLAIDRQLGSLV-THKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDA 80 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~~~~~~~~-~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t 80 (264)
+|+||.|+..|+++++++|++.+...+.. +..|.||||+|+ ..|+ .+++++|++.+.+ ++..+..|.|
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~--~~g~--------~~~v~~Ll~~g~~-~~~~~~~g~t 74 (285)
T 1wdy_A 6 NHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAV--QMSR--------EDIVELLLRHGAD-PVLRKKNGAT 74 (285)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHH--HTTC--------HHHHHHHHHTTCC-TTCCCTTCCC
T ss_pred chHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHH--HcCC--------HHHHHHHHHcCCC-CcccCCCCCC
Confidence 36788888888888888888732222223 666778888888 7888 8888888887777 6667777888
Q ss_pred HHHHHHHhCCHHHHHHHHHHhhhcchhhh----------hhchhhHHHHHhc------CC----------CCCCCChhhH
Q 047844 81 PLHVAARYGHAAVVEALIEIAKQESDQEI----------ESGVESTARHMLG------MK----------NDEEDTALHE 134 (264)
Q Consensus 81 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~----------~~~~~~~~~~~l~------~~----------~~~g~t~L~~ 134 (264)
|||+|+..|+.+++++|+++|++++..+. ..+.......++. .. +..|.||||+
T Consensus 75 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~ 154 (285)
T 1wdy_A 75 PFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMD 154 (285)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHH
Confidence 88888888888888888877766654322 1122222333322 22 6779999999
Q ss_pred HHhcCCHHHHHHHhcC-CCCCCCCCCCCCCCHHHHHHHhCh----HHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCChH
Q 047844 135 AVQSGSLDVVKILLGA-DPAFPYSANGSGETPLYLAAARAH----KEISAEILQKCPSPAHEGPNGKTALHAAVCSRSCA 209 (264)
Q Consensus 135 A~~~~~~~~~~~Ll~~-g~~~~~~~~~~g~t~Lh~A~~~~~----~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~ 209 (264)
|+..|+.+++++|++. |.++ +..|..|+||||+|+..++ .+++++|+++|++++.++..|.||||+|+..++.+
T Consensus 155 A~~~~~~~~v~~Ll~~~~~~~-~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 233 (285)
T 1wdy_A 155 AAEKGHVEVLKILLDEMGADV-NACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLG 233 (285)
T ss_dssp HHHHTCHHHHHHHHHTSCCCT-TCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHcCCHHHHHHHHHhcCCCC-CccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHH
Confidence 9999999999999987 8885 7889999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHh-hhC
Q 047844 210 ASRCHKL-HRS 219 (264)
Q Consensus 210 ~~~~l~~-~~~ 219 (264)
++++|+. .+.
T Consensus 234 ~v~~Ll~~~g~ 244 (285)
T 1wdy_A 234 LVQRLLEQEHI 244 (285)
T ss_dssp HHHHHHHSSSC
T ss_pred HHHHHHhccCC
Confidence 9999998 443
No 35
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=1.3e-34 Score=230.77 Aligned_cols=206 Identities=16% Similarity=0.136 Sum_probs=165.6
Q ss_pred cHHHHHHHcCCchHHhhhhh----hccccccc----CCCCCchhHHHHHH-hhhcCcCCCcccHHHHHHHHHhCCcc---
Q 047844 3 SDLYEAAAKGEIEPFNQLAI----DRQLGSLV----THKKNTVLHVNIIA-SYTQNKEGESVSTKFVERIIEMCPSL--- 70 (264)
Q Consensus 3 ~~l~~A~~~g~~~~~~~l~~----~~~~~~~~----~~~g~t~L~~A~~~-~~g~~~~~~~~~~~~~~~ll~~~~~~--- 70 (264)
++||.||..|+.+.++.|++ .+...+.. +..|.||||+|+.+ ..|+ .+++++|++.+.+.
T Consensus 7 ~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~--------~~~v~~Ll~~g~~~~~~ 78 (260)
T 3jxi_A 7 PILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGR--------NDTIPILLDIAEKTGNM 78 (260)
T ss_dssp HHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTB--------CTHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCC--------HHHHHHHHHhcccccch
Confidence 78999999999998777776 33232223 36799999999822 2488 99999999986431
Q ss_pred -------ceecCCCCChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHH
Q 047844 71 -------LLQVNAKGDAPLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDV 143 (264)
Q Consensus 71 -------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~ 143 (264)
.+..|..|+||||+|+..|+.+++++|++.|++++..+...... ....+..+..|.||||+|+..|+.++
T Consensus 79 ~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~---~~~~~~~~~~g~tpL~~A~~~g~~~~ 155 (260)
T 3jxi_A 79 REFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQ---PKDEGGYFYFGELPLSLAACTNQPHI 155 (260)
T ss_dssp HHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCS---SSCCCCSCCSCSSHHHHHHHTTCHHH
T ss_pred HhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccC---cccccccccCCCCHHHHHHHcCCHHH
Confidence 34455689999999999999999999999998866521100000 00000111689999999999999999
Q ss_pred HHHHhc---CCCCCCCCCCCCCCCHHHHHHHhCh---------HHHHHHHHhhCCCC-------CcCCCCCccHHhHHHh
Q 047844 144 VKILLG---ADPAFPYSANGSGETPLYLAAARAH---------KEISAEILQKCPSP-------AHEGPNGKTALHAAVC 204 (264)
Q Consensus 144 ~~~Ll~---~g~~~~~~~~~~g~t~Lh~A~~~~~---------~~~~~~Ll~~ga~~-------~~~~~~g~tpl~~A~~ 204 (264)
+++|++ .|+++ +.+|..|+||||+|+..++ .+++++|+++|+++ +.+|..|.||||+|+.
T Consensus 156 v~~Ll~~~~~ga~~-~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~ 234 (260)
T 3jxi_A 156 VHYLTENGHKQADL-RRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAK 234 (260)
T ss_dssp HHHHHHCSSCCCCT-TCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred HHHHHhccccCCCC-cccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHH
Confidence 999999 89996 7899999999999998877 79999999999998 6799999999999999
Q ss_pred cCChHHHHHHHhhhCC
Q 047844 205 SRSCAASRCHKLHRSS 220 (264)
Q Consensus 205 ~~~~~~~~~l~~~~~~ 220 (264)
.|+.+++++|+.++..
T Consensus 235 ~g~~~~v~~Ll~~g~~ 250 (260)
T 3jxi_A 235 TGKIGIFQHIIRREIA 250 (260)
T ss_dssp TTCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHhCCC
Confidence 9999999999998754
No 36
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.5e-33 Score=221.54 Aligned_cols=207 Identities=18% Similarity=0.144 Sum_probs=141.2
Q ss_pred CcHHHHHHHcCCchHHhhhhhhcccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChH
Q 047844 2 NSDLYEAAAKGEIEPFNQLAIDRQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAP 81 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~ 81 (264)
.++|++|+..|+.+++++|++.+...+..+..|.||||.|+ ..|+ .+++++|++.+.+.....+..|.||
T Consensus 10 ~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~--~~~~--------~~~v~~Ll~~~~~~~~~~~~~~~t~ 79 (240)
T 3eu9_A 10 TWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAA--INNR--------IDLVKYYISKGAIVDQLGGDLNSTP 79 (240)
T ss_dssp GCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH--HTTC--------HHHHHHHHHTTCCTTCCBTTTTBCH
T ss_pred chHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHH--HhCC--------HHHHHHHHHcCCcchhhcCCcCCCh
Confidence 36888999999999999998843334447888889999999 8888 8999999998888655666668899
Q ss_pred HHHHHHhCCHHHHHHHHHHhhhcchhhh----------hhchhhHHHHH------hcCCCCCCCChhhHHHhcCC-HHHH
Q 047844 82 LHVAARYGHAAVVEALIEIAKQESDQEI----------ESGVESTARHM------LGMKNDEEDTALHEAVQSGS-LDVV 144 (264)
Q Consensus 82 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~----------~~~~~~~~~~~------l~~~~~~g~t~L~~A~~~~~-~~~~ 144 (264)
||+|+..|+.+++++|++.|++++..+. ..+.......+ ++..+..|.||||+|+..++ .+++
T Consensus 80 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 159 (240)
T 3eu9_A 80 LHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPT 159 (240)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTH
T ss_pred hHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHH
Confidence 9999999999999999988877654211 11111122222 23355556666666664443 5666
Q ss_pred HHHhcCCCCCCCCCCC-CCCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCChHHHHHHHhhhC
Q 047844 145 KILLGADPAFPYSANG-SGETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRSCAASRCHKLHRS 219 (264)
Q Consensus 145 ~~Ll~~g~~~~~~~~~-~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~ 219 (264)
++|++.|+++ +..+. .|.||||+|+..++.+++++|+++|++++.++..|.||+++|+..++.+++++|+..++
T Consensus 160 ~~L~~~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~ 234 (240)
T 3eu9_A 160 RLLLTFNVSV-NLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQ 234 (240)
T ss_dssp HHHHHTTCCT-TCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC-
T ss_pred HHHHhcCCCc-chhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhh
Confidence 6666666664 33333 66677777777777777777777777776666667777777777777777776666554
No 37
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=4.7e-34 Score=229.87 Aligned_cols=178 Identities=21% Similarity=0.199 Sum_probs=148.4
Q ss_pred CcHHHHHHHcCCchHHhhhhhhcccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCc------------
Q 047844 2 NSDLYEAAAKGEIEPFNQLAIDRQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPS------------ 69 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~------------ 69 (264)
.||||+|+..|+.+++++|++.+...+..+..|.||||+|+ ..|+ .+++++|++.++.
T Consensus 46 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~--~~~~--------~~~v~~Ll~~~~~~~~~~~~~~~~~ 115 (282)
T 1oy3_D 46 QTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLAC--RVRA--------HTCACVLLQPRPSHPRDASDTYLTQ 115 (282)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHT--TTTC--------HHHHHHHSSSCCSSCCCC-------
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH--HcCC--------cchhHhhhccCCCCchhhHHHHhhc
Confidence 58999999999999999999944444458999999999999 9999 9999999997754
Q ss_pred ----------------------------------cceecCCCCChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhh
Q 047844 70 ----------------------------------LLLQVNAKGDAPLHVAARYGHAAVVEALIEIAKQESDQEIESGVES 115 (264)
Q Consensus 70 ----------------------------------~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~ 115 (264)
.++..+..|.||||+|+..|+.+++++|++.|++++.
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--------- 186 (282)
T 1oy3_D 116 SQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNK--------- 186 (282)
T ss_dssp ----------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC---------
T ss_pred ccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCC---------
Confidence 1456788999999999999999999999999988654
Q ss_pred HHHHHhcCCCC-CCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCC
Q 047844 116 TARHMLGMKND-EEDTALHEAVQSGSLDVVKILLGADPAFPYSANGSGETPLYLAAARAHKEISAEILQKCPSPAHEGPN 194 (264)
Q Consensus 116 ~~~~~l~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~ 194 (264)
.+. .|.||||+|+..|+.+++++|++.|+++ +.+|..|+||||+|+..++.+++++|+++|++++.++..
T Consensus 187 --------~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~ 257 (282)
T 1oy3_D 187 --------PEPTCGRTPLHLAVEAQAASVLELLLKAGADP-TARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGD 257 (282)
T ss_dssp --------CCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC--
T ss_pred --------CCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCC-cccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCc
Confidence 554 5999999999999999999999999996 789999999999999999999999999999999999999
Q ss_pred CccHHhHHHhcCC
Q 047844 195 GKTALHAAVCSRS 207 (264)
Q Consensus 195 g~tpl~~A~~~~~ 207 (264)
|.||+++|....+
T Consensus 258 g~tpl~~a~~~~~ 270 (282)
T 1oy3_D 258 KLSPCSSSGSDSD 270 (282)
T ss_dssp -------------
T ss_pred ccccccccCCccc
Confidence 9999999987664
No 38
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=1e-33 Score=237.18 Aligned_cols=195 Identities=16% Similarity=0.124 Sum_probs=173.3
Q ss_pred CcHHHHHHHcCCchHHhhhh--------hhcccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCcccee
Q 047844 2 NSDLYEAAAKGEIEPFNQLA--------IDRQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQ 73 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~--------~~~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~ 73 (264)
.||||+||..|+.+++++|+ +.+...+..|..|.||||+|+ ..|+ .+++++|++.+.+ ++.
T Consensus 126 ~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~--~~g~--------~~iv~~Ll~~ga~-~~~ 194 (373)
T 2fo1_E 126 RTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAV--LARR--------RRLVAYLMKAGAD-PTI 194 (373)
T ss_dssp CCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHH--HHTC--------HHHHHHHHHTTCC-SCC
T ss_pred CCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHH--HcCh--------HHHHHHHHHCCCC-Ccc
Confidence 48999999999999999987 433334448999999999999 9999 9999999999999 788
Q ss_pred cCCCCChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcC---CHHHHHHHhcC
Q 047844 74 VNAKGDAPLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSG---SLDVVKILLGA 150 (264)
Q Consensus 74 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~---~~~~~~~Ll~~ 150 (264)
.+..|.||||+|+..|+.+++++|++.+... ..++..+..|.||||+|+..+ +.+++++|++.
T Consensus 195 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~--------------~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~ 260 (373)
T 2fo1_E 195 YNKSERSALHQAAANRDFGMMVYMLNSTKLK--------------GDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEK 260 (373)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHTTSHHHH--------------HTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHHhcCccc--------------cChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHC
Confidence 9999999999999999999999999987311 114558999999999999998 89999999999
Q ss_pred CCCCCC-------CCCCCCCCHHHHHHHhChHHHHHHHHhhC-CCCCcCCCCCccHHhHHHhcCChHHHHHHHhhhCCC
Q 047844 151 DPAFPY-------SANGSGETPLYLAAARAHKEISAEILQKC-PSPAHEGPNGKTALHAAVCSRSCAASRCHKLHRSSR 221 (264)
Q Consensus 151 g~~~~~-------~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g-a~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~~ 221 (264)
|+++.. ..|..|+||||+|+..|+.+++++|++.+ ++++.+|..|.||||+|+..|+.+++++|+.+++..
T Consensus 261 g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~ 339 (373)
T 2fo1_E 261 GAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASV 339 (373)
T ss_dssp TCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS
T ss_pred CCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Confidence 998632 25778999999999999999999999886 999999999999999999999999999999987653
No 39
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=2.1e-33 Score=213.92 Aligned_cols=160 Identities=19% Similarity=0.179 Sum_probs=152.7
Q ss_pred cCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChHHHHHHHhCCHHHHHHHHHHhhhcchhhh
Q 047844 30 VTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAPLHVAARYGHAAVVEALIEIAKQESDQEI 109 (264)
Q Consensus 30 ~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~ 109 (264)
+|..|.||||.|+ ..|+ .+++++|++.+.+ ++..+..|+||||+|+..|+.+++++|++.|++++.
T Consensus 31 ~d~~g~t~L~~A~--~~g~--------~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--- 96 (192)
T 2rfm_A 31 RDSYNRTPLMVAC--MLGM--------ENAIDKLVENFDK-LEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNT--- 96 (192)
T ss_dssp CCTTCCCHHHHHH--HHTC--------GGGHHHHHHHHCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC---
T ss_pred cCCCCCCHHHHHH--HcCC--------HHHHHHHHHhccc-cccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCC---
Confidence 7999999999999 9999 9999999999988 788899999999999999999999999999987544
Q ss_pred hhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHhhCCCCC
Q 047844 110 ESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANGSGETPLYLAAARAHKEISAEILQKCPSPA 189 (264)
Q Consensus 110 ~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~ 189 (264)
++..|.||||+|+..|+.+++++|++.|+++ +..|..|.||||+|+..++.+++++|+++|++++
T Consensus 97 --------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 161 (192)
T 2rfm_A 97 --------------KDFSGKTPLMWSIIFGYSEMSYFLLEHGANV-NDRNLEGETPLIVASKYGRSEIVKKLLELGADIS 161 (192)
T ss_dssp --------------CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred --------------CCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 8899999999999999999999999999996 7889999999999999999999999999999999
Q ss_pred cCCCCCccHHhHHHhcCChHHHHHHHhhh
Q 047844 190 HEGPNGKTALHAAVCSRSCAASRCHKLHR 218 (264)
Q Consensus 190 ~~~~~g~tpl~~A~~~~~~~~~~~l~~~~ 218 (264)
.+|..|.||+++|+..++.+++++|+.++
T Consensus 162 ~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 162 ARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp CBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred CcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 99999999999999999999999998875
No 40
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=100.00 E-value=5.4e-34 Score=229.32 Aligned_cols=188 Identities=22% Similarity=0.276 Sum_probs=171.6
Q ss_pred cHHHHHHHcCCchHHhhhhhh--cccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCCh
Q 047844 3 SDLYEAAAKGEIEPFNQLAID--RQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDA 80 (264)
Q Consensus 3 ~~l~~A~~~g~~~~~~~l~~~--~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t 80 (264)
+++|.|+..|+++.++.+++. ....+..|.+|.||||+|+ ..|+ .+++++|++.+...++..+..|.|
T Consensus 78 ~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~--~~g~--------~~~v~~Ll~~g~~~~~~~~~~g~t 147 (276)
T 4hbd_A 78 SDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSV--SHAN--------FPVVQQLLDSGVCKVDKQNRAGYS 147 (276)
T ss_dssp TTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHH--HTTC--------HHHHHHHHHTSCCCTTCCCTTSCC
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHH--HCCC--------HHHHHHHHHCCCCcCCCCCCCCCC
Confidence 578899999999999999882 1113338999999999999 9999 999999999998558999999999
Q ss_pred HHHHHH-----HhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCC
Q 047844 81 PLHVAA-----RYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFP 155 (264)
Q Consensus 81 ~L~~A~-----~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~ 155 (264)
|||+|+ ..++.+++++|++.|..... .+..|.||||+|+..|+.+++++|++.|+++
T Consensus 148 pL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~-----------------~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~- 209 (276)
T 4hbd_A 148 PIMLTALATLKTQDDIETVLQLFRLGNINAK-----------------ASQAGQTALMLAVSHGRVDVVKALLACEADV- 209 (276)
T ss_dssp HHHHGGGCCCCSHHHHHHHHHHHHHSCTTCC-----------------CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-
T ss_pred HHHHHHHHHhhhhhhHHHHHHHHHcCCCccc-----------------cCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-
Confidence 999999 66889999999999876443 7888999999999999999999999999996
Q ss_pred CCCCCCCCCHHHHHHHhChHHHHHHHHh-hCCCCCcCCCCCccHHhHHHhcCChHHHHHHHhhh
Q 047844 156 YSANGSGETPLYLAAARAHKEISAEILQ-KCPSPAHEGPNGKTALHAAVCSRSCAASRCHKLHR 218 (264)
Q Consensus 156 ~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~-~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~ 218 (264)
+..|..|+||||+|+..|+.+++++|++ .|++++.+|..|.|||++|+..|+.+++++|+.+.
T Consensus 210 n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 210 NVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred CCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 7899999999999999999999999999 89999999999999999999999999999998864
No 41
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=2.8e-33 Score=231.35 Aligned_cols=209 Identities=19% Similarity=0.193 Sum_probs=158.1
Q ss_pred CcHHHHHHHcCCchHHhhhhhhcccccccC-CCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCcc----------
Q 047844 2 NSDLYEAAAKGEIEPFNQLAIDRQLGSLVT-HKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSL---------- 70 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~~~~~~~~~-~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~---------- 70 (264)
+|+||.|+..|++++|++|++.+-..+.++ ..|+||||+|+ ..|+ .+++++|+++++++
T Consensus 26 ~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~--~~g~--------~~iv~~Ll~~ga~~~~~~~~~~~~ 95 (337)
T 4g8k_A 26 NHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAV--QMSR--------EDIVELLLRHGADPVLRKKNGATP 95 (337)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHH--HTTC--------HHHHHHHHHTTCCTTCCCTTCCCH
T ss_pred ChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHH--HcCC--------HHHHHHHHHcCCchhhhccCCCch
Confidence 479999999999999999999332222245 45999999999 9999 99999999987652
Q ss_pred ----------------------ceecCCCCChHHHHHHHhCCHHHHHHHHHHhhhcchhhh-------------------
Q 047844 71 ----------------------LLQVNAKGDAPLHVAARYGHAAVVEALIEIAKQESDQEI------------------- 109 (264)
Q Consensus 71 ----------------------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~------------------- 109 (264)
++..|..|.||||+|+..|+.+++++|++.|++++....
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A 175 (337)
T 4g8k_A 96 FILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDA 175 (337)
T ss_dssp HHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHH
T ss_pred hHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHH
Confidence 345678899999999999999999999999987654321
Q ss_pred -hhchhhHHHHH-------hcCCCCCCCChhhHHHhcCC----HHHHHHHhcCCCCCCCCCCCCCCCHHHHHHHhChHHH
Q 047844 110 -ESGVESTARHM-------LGMKNDEEDTALHEAVQSGS----LDVVKILLGADPAFPYSANGSGETPLYLAAARAHKEI 177 (264)
Q Consensus 110 -~~~~~~~~~~~-------l~~~~~~g~t~L~~A~~~~~----~~~~~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~~ 177 (264)
..+....++.+ ++.++..|.|+++.++..+. ..++++|+++|+++ +.+|..|+||||+|+..++.++
T Consensus 176 ~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~-n~~d~~g~t~L~~a~~~~~~~~ 254 (337)
T 4g8k_A 176 AEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADV-NVRGERGKTPLILAVEKKHLGL 254 (337)
T ss_dssp HHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCT-TCCCGGGCCHHHHHHHTTCHHH
T ss_pred HHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhhhhHH
Confidence 11111122222 23455556666665544322 34556666666664 5677788899999999999999
Q ss_pred HHHHHhh-CCCCCcCCCCCccHHhHHHhcCChHHHHHHHhhhCCC
Q 047844 178 SAEILQK-CPSPAHEGPNGKTALHAAVCSRSCAASRCHKLHRSSR 221 (264)
Q Consensus 178 ~~~Ll~~-ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~~ 221 (264)
++.|+.. |++++.+|..|+||||+|+..|+.+++++|+.+++..
T Consensus 255 v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~ 299 (337)
T 4g8k_A 255 VQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAST 299 (337)
T ss_dssp HHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSS
T ss_pred HHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 9888875 7889999999999999999999999999998887654
No 42
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=3.4e-33 Score=217.52 Aligned_cols=183 Identities=17% Similarity=0.224 Sum_probs=163.3
Q ss_pred cCCchHHhhhhhh-cccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChHHHHHHHhC
Q 047844 11 KGEIEPFNQLAID-RQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAPLHVAARYG 89 (264)
Q Consensus 11 ~g~~~~~~~l~~~-~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g 89 (264)
.|+.+++++|++. .+.....|..|.||||+|+ ..|+ .+++++|++.+.+ ++..+..|+||||+|+..|
T Consensus 1 gg~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~--~~g~--------~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~ 69 (223)
T 2f8y_A 1 GDAPAVISDFIYQGASLHNQTDRTGETALHLAA--RYSR--------SDAAKRLLEASAD-ANIQDNMGRTPLHAAVSAD 69 (223)
T ss_dssp ----CCEETTEETTCCTTCCCTTTCCCHHHHHH--HTTC--------HHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTT
T ss_pred CCcHHHHHHHHHcCCCcccccCCCCCchHHHHH--HcCC--------HHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcC
Confidence 3788999999983 3333335889999999999 9999 9999999999988 7889999999999999999
Q ss_pred CHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCCCCCHHHHH
Q 047844 90 HAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANGSGETPLYLA 169 (264)
Q Consensus 90 ~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~Lh~A 169 (264)
+.+++++|++.++.. ++..+..|.||||+|+..|+.+++++|++.|+++ +..|..|+||||+|
T Consensus 70 ~~~~v~~Ll~~~~~~----------------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A 132 (223)
T 2f8y_A 70 AQGVFQILIRNRATD----------------LDARMHDGTTPLILAARLAVEGMLEDLINSHADV-NAVDDLGKSALHWA 132 (223)
T ss_dssp CHHHHHHHHHBTTSC----------------TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTSCBHHHHH
T ss_pred CHHHHHHHHHcCCCC----------------cccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCC-cCcCCCCCcHHHHH
Confidence 999999999987621 3447889999999999999999999999999995 78899999999999
Q ss_pred HHhChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCChHHHHHHHhhhCCC
Q 047844 170 AARAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRSCAASRCHKLHRSSR 221 (264)
Q Consensus 170 ~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~~ 221 (264)
+..++.+++++|+++|++++.++..|.||||+|+..++.+++++|+.+++..
T Consensus 133 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 184 (223)
T 2f8y_A 133 AAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANR 184 (223)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 9999999999999999999999999999999999999999999999988653
No 43
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=7.2e-33 Score=217.63 Aligned_cols=179 Identities=19% Similarity=0.145 Sum_probs=145.0
Q ss_pred cCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChHHHHHHHhCCHHHHHHHHHHhhhcchhhh
Q 047844 30 VTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAPLHVAARYGHAAVVEALIEIAKQESDQEI 109 (264)
Q Consensus 30 ~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~ 109 (264)
.|..|.|+|+.|+ ..|+ .+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|++.+........
T Consensus 5 ~d~~~~~~l~~A~--~~g~--------~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 73 (240)
T 3eu9_A 5 IDDYSTWDIVKAT--QYGI--------YERCRELVEAGYD-VRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGG 73 (240)
T ss_dssp CSCGGGCCHHHHH--HTTC--------HHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBT
T ss_pred cccccchHHHHHH--HcCC--------hHHHHHHHHcCCC-cCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcC
Confidence 6889999999999 9999 9999999999988 788899999999999999999999999999987654322
Q ss_pred h-----------hchhhHHHHHh------cCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCCCCCHHHHHHHh
Q 047844 110 E-----------SGVESTARHML------GMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANGSGETPLYLAAAR 172 (264)
Q Consensus 110 ~-----------~~~~~~~~~~l------~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~ 172 (264)
. .+....+..++ +..+..|.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..
T Consensus 74 ~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~-~~~~~~g~t~l~~a~~~ 152 (240)
T 3eu9_A 74 DLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDV-DMMDQNGMTPLMWAAYR 152 (240)
T ss_dssp TTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHH
T ss_pred CcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCc-cccCCCCCcHHHHHHHh
Confidence 1 22222333333 346677888888888888888888888888875 67778888888888866
Q ss_pred Ch-HHHHHHHHhhCCCCCcCCC-CCccHHhHHHhcCChHHHHHHHhhhCC
Q 047844 173 AH-KEISAEILQKCPSPAHEGP-NGKTALHAAVCSRSCAASRCHKLHRSS 220 (264)
Q Consensus 173 ~~-~~~~~~Ll~~ga~~~~~~~-~g~tpl~~A~~~~~~~~~~~l~~~~~~ 220 (264)
++ .+++++|++.|++++..+. .|.||||+|+..++.+++++|+.+++.
T Consensus 153 ~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 202 (240)
T 3eu9_A 153 THSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGAN 202 (240)
T ss_dssp CCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCC
T ss_pred CChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCC
Confidence 65 6788888888888888876 788888888888888888888887654
No 44
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.3e-32 Score=227.90 Aligned_cols=192 Identities=24% Similarity=0.272 Sum_probs=172.6
Q ss_pred CcHHHHHHHcCCchHHhhhhhh-cccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCCh
Q 047844 2 NSDLYEAAAKGEIEPFNQLAID-RQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDA 80 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~-~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t 80 (264)
.++||.||..|+.+.++.|+.. ....+..|..|.||||+|+ ..|+ .+++++|++.+.+ ++..|..|+|
T Consensus 25 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~--~~g~--------~~~v~~Ll~~g~~-~~~~~~~g~t 93 (351)
T 3utm_A 25 KDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAA--GYNR--------VRIVQLLLQHGAD-VHAKDKGGLV 93 (351)
T ss_dssp HHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHH--HTTC--------HHHHHHHHHTTCC-TTCCCTTCCC
T ss_pred chhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHH--HcCC--------HHHHHHHHHcCCC-CCccCCCCCc
Confidence 3799999999999999999982 3333447899999999999 9999 9999999999998 7889999999
Q ss_pred HHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCC----
Q 047844 81 PLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPY---- 156 (264)
Q Consensus 81 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~---- 156 (264)
|||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|++.|++...
T Consensus 94 ~L~~A~~~g~~~iv~~Ll~~g~~~~~-----------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 156 (351)
T 3utm_A 94 PLHNACSYGHYEVTELLLKHGACVNA-----------------MDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCH 156 (351)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTC-----------------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred HHHHHHHCCCHHHHHHHHHCCCCCCC-----------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCC
Confidence 99999999999999999999988544 889999999999999999999999999987521
Q ss_pred -------------------------------------------------CCCCCCCCHHHHHHHh---ChHHHHHHHHhh
Q 047844 157 -------------------------------------------------SANGSGETPLYLAAAR---AHKEISAEILQK 184 (264)
Q Consensus 157 -------------------------------------------------~~~~~g~t~Lh~A~~~---~~~~~~~~Ll~~ 184 (264)
..+..|.||||+|+.. +..+++++|++.
T Consensus 157 g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~ 236 (351)
T 3utm_A 157 GKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRK 236 (351)
T ss_dssp SCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHT
T ss_pred CCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHc
Confidence 1345678999999998 678999999999
Q ss_pred CCCCCcCCCCCccHHhHHHhcCChHHHHHHHhhhCCC
Q 047844 185 CPSPAHEGPNGKTALHAAVCSRSCAASRCHKLHRSSR 221 (264)
Q Consensus 185 ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~~ 221 (264)
|++++.++..|.||||+|+..++.+++++|+.+++..
T Consensus 237 g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~ 273 (351)
T 3utm_A 237 GANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKM 273 (351)
T ss_dssp TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 9999999999999999999999999999999987653
No 45
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=100.00 E-value=5e-33 Score=208.15 Aligned_cols=159 Identities=21% Similarity=0.236 Sum_probs=125.0
Q ss_pred CCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhch
Q 047844 34 KNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAPLHVAARYGHAAVVEALIEIAKQESDQEIESGV 113 (264)
Q Consensus 34 g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~ 113 (264)
+.||||.|+ ..|+ .+++++|++.++..++..+..|+||||+|+..|+.+++++|++.|++++.
T Consensus 2 ~~~~L~~A~--~~g~--------~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------- 64 (172)
T 3v30_A 2 DSLSIHQLA--AQGE--------LDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHI------- 64 (172)
T ss_dssp --CCHHHHH--HTTC--------HHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC-------
T ss_pred chhhHHHHH--HcCC--------HHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchh-------
Confidence 457788888 8888 88888888887776777778888888888888888888888887776443
Q ss_pred hhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHhhCCCCCcCCC
Q 047844 114 ESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANGSGETPLYLAAARAHKEISAEILQKCPSPAHEGP 193 (264)
Q Consensus 114 ~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~ 193 (264)
++..|.||||+|+..|+.+++++|++.|+++ +..|..|+||||+|+..++.+++++|+++|++++.++.
T Consensus 65 ----------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 133 (172)
T 3v30_A 65 ----------LAKERESALSLASTGGYTDIVGLLLERDVDI-NIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEAD 133 (172)
T ss_dssp ----------CCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred ----------hcccCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCC
Confidence 6777888888888888888888888888775 67777788888888888888888888888888888888
Q ss_pred CCccHHhHHHhcCChHHHHHHHhhhCC
Q 047844 194 NGKTALHAAVCSRSCAASRCHKLHRSS 220 (264)
Q Consensus 194 ~g~tpl~~A~~~~~~~~~~~l~~~~~~ 220 (264)
.|.||+++|+..++.+++++|+.+++.
T Consensus 134 ~g~t~l~~A~~~~~~~~~~~L~~~~~~ 160 (172)
T 3v30_A 134 SGYTPMDLAVALGYRKVQQVIENHILK 160 (172)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHhCcHHHHHHHHHHHHH
Confidence 888888888888888888888777664
No 46
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=100.00 E-value=2.9e-32 Score=203.04 Aligned_cols=158 Identities=23% Similarity=0.253 Sum_probs=150.1
Q ss_pred CCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhc
Q 047844 33 KKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAPLHVAARYGHAAVVEALIEIAKQESDQEIESG 112 (264)
Q Consensus 33 ~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~ 112 (264)
.|.||||.|+ ..|+ .+++++|++.+.+ ++..|..|.||||+|+..|+.+++++|++.|++++.
T Consensus 2 ~~~t~L~~A~--~~g~--------~~~v~~ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------ 64 (167)
T 3v31_A 2 ANSLSVHQLA--AQGE--------MLYLATRIEQENV-INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQL------ 64 (167)
T ss_dssp TTCCCHHHHH--HTTC--------HHHHHHHHHHSSC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------
T ss_pred CCcchHHHHH--HCCC--------HHHHHHHHHcCCC-cCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC------
Confidence 5789999999 9999 9999999999988 888999999999999999999999999999888544
Q ss_pred hhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHhhCCCCCcCC
Q 047844 113 VESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANGSGETPLYLAAARAHKEISAEILQKCPSPAHEG 192 (264)
Q Consensus 113 ~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~ 192 (264)
.+..|.||||+|+..|+.+++++|++.|+++ +..|..|+||||+|+..++.+++++|+++|++++.++
T Consensus 65 -----------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 132 (167)
T 3v31_A 65 -----------LGKGRESALSLACSKGYTDIVKMLLDCGVDV-NEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIET 132 (167)
T ss_dssp -----------CCTTCCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred -----------cCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence 8899999999999999999999999999996 7889999999999999999999999999999999999
Q ss_pred CCCccHHhHHHhcCChHHHHHHHhhhC
Q 047844 193 PNGKTALHAAVCSRSCAASRCHKLHRS 219 (264)
Q Consensus 193 ~~g~tpl~~A~~~~~~~~~~~l~~~~~ 219 (264)
..|.||+++|+..++.+++++|+.+..
T Consensus 133 ~~g~t~l~~A~~~~~~~~~~~L~~~~~ 159 (167)
T 3v31_A 133 DSGYNSMDLAVALGYRSVQQVIESHLL 159 (167)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHcCcHHHHHHHHHHHH
Confidence 999999999999999999999988764
No 47
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=100.00 E-value=5.1e-32 Score=202.65 Aligned_cols=162 Identities=20% Similarity=0.181 Sum_probs=134.5
Q ss_pred cHHHHHHHcCCchHHhhhhhhcccccccC-CCC-----CchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCC
Q 047844 3 SDLYEAAAKGEIEPFNQLAIDRQLGSLVT-HKK-----NTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNA 76 (264)
Q Consensus 3 ~~l~~A~~~g~~~~~~~l~~~~~~~~~~~-~~g-----~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~ 76 (264)
+|||+|+..|+ ++.+..-.... .+ .+. .||||+|+ ..|+ .+++++|++.+.+ ++..+.
T Consensus 4 ~~L~~A~~~g~---~~~v~~ll~~~--~~~~~~~~~~g~t~L~~A~--~~~~--------~~~v~~Ll~~g~~-~~~~~~ 67 (172)
T 3v30_A 4 LSIHQLAAQGE---LDQLKEHLRKG--DNLVNKPDERGFTPLIWAS--AFGE--------IETVRFLLEWGAD-PHILAK 67 (172)
T ss_dssp CCHHHHHHTTC---HHHHHHHHTTC--SGGGGCCCTTSCCHHHHHH--HTTC--------HHHHHHHHHHTCC-TTCCCT
T ss_pred hhHHHHHHcCC---HHHHHHHHHcC--cccccCCCCCCCCHHHHHH--HcCC--------HHHHHHHHHcCCC-chhhcc
Confidence 68999999886 43333222221 11 222 28999999 9999 9999999999988 788999
Q ss_pred CCChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCC
Q 047844 77 KGDAPLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPY 156 (264)
Q Consensus 77 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~ 156 (264)
.|.||||+|+..|+.+++++|++.|++++. ++..|.||||+|+..|+.+++++|++.|+++ +
T Consensus 68 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-----------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~ 129 (172)
T 3v30_A 68 ERESALSLASTGGYTDIVGLLLERDVDINI-----------------YDWNGGTPLLYAVRGNHVKCVEALLARGADL-T 129 (172)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHTTTCCTTC-----------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-T
T ss_pred cCCCHHHHHHHCCCHHHHHHHHHcCCCCCC-----------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-c
Confidence 999999999999999999999999887544 8899999999999999999999999999996 7
Q ss_pred CCCCCCCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccH
Q 047844 157 SANGSGETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKTA 198 (264)
Q Consensus 157 ~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tp 198 (264)
..|..|.||||+|+..++.+++++|+++|+++..++..|.||
T Consensus 130 ~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 130 TEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPADP 171 (172)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSCC-------
T ss_pred ccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhcccCCCCCC
Confidence 889999999999999999999999999999999888888876
No 48
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=3.6e-32 Score=202.96 Aligned_cols=160 Identities=23% Similarity=0.242 Sum_probs=148.5
Q ss_pred cCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChHHHHHHHhCCHHHHHHHHHHhhhcchhhh
Q 047844 30 VTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAPLHVAARYGHAAVVEALIEIAKQESDQEI 109 (264)
Q Consensus 30 ~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~ 109 (264)
....+.++|+.|+ ..|+ .+++++|++.+.+ ++..|..|.||||+|+..|+.+++++|++.|++++.
T Consensus 10 ~~~~~~~~l~~A~--~~g~--------~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--- 75 (169)
T 2y1l_E 10 HGSDLGKKLLEAA--RAGR--------DDEVRILMANGAD-VNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNA--- 75 (169)
T ss_dssp ---CHHHHHHHHH--HHTC--------HHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC---
T ss_pred CCCcccchHHHHH--HcCC--------HHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc---
Confidence 4556789999999 9999 9999999999988 788999999999999999999999999999887544
Q ss_pred hhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHhhCCCCC
Q 047844 110 ESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANGSGETPLYLAAARAHKEISAEILQKCPSPA 189 (264)
Q Consensus 110 ~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~ 189 (264)
.+..|.||||+|+..|+.+++++|++.|+++ +..|..|+||||+|+..++.+++++|+++|++++
T Consensus 76 --------------~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 140 (169)
T 2y1l_E 76 --------------VDHAGMTPLRLAALFGHLEIVEVLLKNGADV-NANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVN 140 (169)
T ss_dssp --------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred --------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 8899999999999999999999999999996 7889999999999999999999999999999999
Q ss_pred cCCCCCccHHhHHHhcCChHHHHHHHhhh
Q 047844 190 HEGPNGKTALHAAVCSRSCAASRCHKLHR 218 (264)
Q Consensus 190 ~~~~~g~tpl~~A~~~~~~~~~~~l~~~~ 218 (264)
.+|..|.||+++|+..++.+++++|+.++
T Consensus 141 ~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 141 AQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred CcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 99999999999999999999999998753
No 49
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=3.8e-32 Score=220.74 Aligned_cols=202 Identities=19% Similarity=0.138 Sum_probs=165.2
Q ss_pred CcHHHHHHHcCCchHHhhhhhhcccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChH
Q 047844 2 NSDLYEAAAKGEIEPFNQLAIDRQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAP 81 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~ 81 (264)
.||||+||..|+.+++++|++.+...+..|..|.||||+|+ ..|+ .+++++|++.+.+ ++..+..|.||
T Consensus 74 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~--~~g~--------~~~v~~Ll~~g~~-~~~~~~~g~t~ 142 (299)
T 1s70_B 74 LTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAA--SCGY--------LDIAEYLISQGAH-VGAVNSEGDTP 142 (299)
T ss_dssp CBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH--HHTC--------HHHHHHHHHTTCC-TTCCCTTSCCH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH--HcCC--------HHHHHHHHhCCCC-CCCcCCCCCCH
Confidence 48999999999999999999954444558999999999999 9999 9999999999998 78899999999
Q ss_pred HHHHHHhCCHHHHHHHHHHhh-hcchhhhhhchh--hHHHHH-------hcCCCCCCCChhhHHHhcCCHHHHHHHhcCC
Q 047844 82 LHVAARYGHAAVVEALIEIAK-QESDQEIESGVE--STARHM-------LGMKNDEEDTALHEAVQSGSLDVVKILLGAD 151 (264)
Q Consensus 82 L~~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~--~~~~~~-------l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g 151 (264)
||+|+..++.+++++++.... +........... ...... ....+..|.||||+|+..|+.+++++|++.|
T Consensus 143 l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 222 (299)
T 1s70_B 143 LDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQAR 222 (299)
T ss_dssp HHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTT
T ss_pred HHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcC
Confidence 999999999999998887542 222111100000 000111 1235678999999999999999999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCChHHHHHHHh
Q 047844 152 PAFPYSANGSGETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRSCAASRCHKL 216 (264)
Q Consensus 152 ~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~ 216 (264)
+++ +..|..|+||||+|+..|+.+++++|+++|++++.+|..|.||+++|+... .+.++.++.
T Consensus 223 ~d~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~-~~~l~~l~~ 285 (299)
T 1s70_B 223 YDV-NIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDI-LGYLEELQK 285 (299)
T ss_dssp CCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSGG-GHHHHHHHH
T ss_pred CCC-CCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHHH-HHHHHHHHH
Confidence 996 789999999999999999999999999999999999999999999997643 444444443
No 50
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=100.00 E-value=2.5e-32 Score=202.26 Aligned_cols=157 Identities=18% Similarity=0.207 Sum_probs=114.0
Q ss_pred CCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhc
Q 047844 33 KKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAPLHVAARYGHAAVVEALIEIAKQESDQEIESG 112 (264)
Q Consensus 33 ~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~ 112 (264)
...||||.|+ ..|+ .+++++|++.+.+ ++..+..|+||||+|+. |+.+++++|++.|++++.
T Consensus 4 ~~~~~L~~A~--~~g~--------~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~------ 65 (162)
T 1ihb_A 4 PWGNELASAA--ARGD--------LEQLTSLLQNNVN-VNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDL------ 65 (162)
T ss_dssp -CHHHHHHHH--HHTC--------HHHHHHHTTSCCC-TTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTC------
T ss_pred hHhhHHHHHH--HcCC--------HHHHHHHHhCCCC-ccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCC------
Confidence 3457777777 7777 7777777777766 56677777777777777 777777777777666433
Q ss_pred hhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHhhCCC-CCcC
Q 047844 113 VESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANGSGETPLYLAAARAHKEISAEILQKCPS-PAHE 191 (264)
Q Consensus 113 ~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~-~~~~ 191 (264)
++..|.||||+|+..|+.+++++|++.|+++ +.+|..|+||||+|+..|+.+++++|+++|++ ++.+
T Consensus 66 -----------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 133 (162)
T 1ihb_A 66 -----------KDRTGFAVIHDAARAGFLDTLQTLLEFQADV-NIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHR 133 (162)
T ss_dssp -----------CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCC
T ss_pred -----------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCc
Confidence 6677777777777777777777777777774 56677777777777777777777777777776 4777
Q ss_pred CCCCccHHhHHHhcCChHHHHHHHhhhC
Q 047844 192 GPNGKTALHAAVCSRSCAASRCHKLHRS 219 (264)
Q Consensus 192 ~~~g~tpl~~A~~~~~~~~~~~l~~~~~ 219 (264)
+..|.||+|+|+..++.+++++|+.+++
T Consensus 134 ~~~g~t~l~~A~~~~~~~~~~~Ll~~GA 161 (162)
T 1ihb_A 134 NHKGDTACDLARLYGRNEVVSLMQANGA 161 (162)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTC-
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHhCC
Confidence 7777777777777777777777777654
No 51
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.98 E-value=5.4e-32 Score=200.45 Aligned_cols=154 Identities=24% Similarity=0.246 Sum_probs=128.5
Q ss_pred CcHHHHHHHcCCchHHhhhhhhccccccc---CCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCC
Q 047844 2 NSDLYEAAAKGEIEPFNQLAIDRQLGSLV---THKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKG 78 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~~~~~~~~---~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g 78 (264)
.+|||.|+..|+ ++.+-.=....... +..|.||||+|+ . |+ .+++++|++.+.+ ++..+..|
T Consensus 6 ~~~L~~A~~~g~---~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~--~-~~--------~~~v~~Ll~~g~~-~~~~~~~g 70 (162)
T 1ihb_A 6 GNELASAAARGD---LEQLTSLLQNNVNVNAQNGFGRTALQVMK--L-GN--------PEIARRLLLRGAN-PDLKDRTG 70 (162)
T ss_dssp HHHHHHHHHHTC---HHHHHHHTTSCCCTTCCCTTSCCHHHHCC--S-SC--------HHHHHHHHHTTCC-TTCCCTTS
T ss_pred hhHHHHHHHcCC---HHHHHHHHhCCCCccccCccCccHHHHHH--c-Cc--------HHHHHHHHHcCCC-CCCCCCCC
Confidence 478999998885 33332233322111 245889999999 8 99 9999999999988 78889999
Q ss_pred ChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCC
Q 047844 79 DAPLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSA 158 (264)
Q Consensus 79 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~ 158 (264)
+||||+|+..|+.+++++|++.|++++. ++..|.||||+|+..|+.+++++|++.|++..+..
T Consensus 71 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-----------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 133 (162)
T 1ihb_A 71 FAVIHDAARAGFLDTLQTLLEFQADVNI-----------------EDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHR 133 (162)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTC-----------------CCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCC-----------------cCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCc
Confidence 9999999999999999999999887544 88899999999999999999999999999855788
Q ss_pred CCCCCCHHHHHHHhChHHHHHHHHhhCCC
Q 047844 159 NGSGETPLYLAAARAHKEISAEILQKCPS 187 (264)
Q Consensus 159 ~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~ 187 (264)
+..|.||||+|+..++.+++++|+++|++
T Consensus 134 ~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 134 NHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 99999999999999999999999999975
No 52
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.98 E-value=4.5e-32 Score=201.59 Aligned_cols=161 Identities=21% Similarity=0.242 Sum_probs=147.8
Q ss_pred cCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChHHHHHHHhCCHHHHHHHHHHhhhcchhhh
Q 047844 30 VTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAPLHVAARYGHAAVVEALIEIAKQESDQEI 109 (264)
Q Consensus 30 ~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~ 109 (264)
.+..|.|+||.|+ ..|+ .+++++|++.+....+..+..|+||||+|+..|+.+++++|++.|++++.
T Consensus 4 ~~~~~~~~l~~A~--~~g~--------~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--- 70 (165)
T 3twr_A 4 GNSEADRQLLEAA--KAGD--------VETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHA--- 70 (165)
T ss_dssp --CHHHHHHHHHH--HHTC--------HHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC---
T ss_pred CcchhhHHHHHHH--HhCC--------HHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCc---
Confidence 5778899999999 9999 99999999977766788889999999999999999999999999988544
Q ss_pred hhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHhhCCCCC
Q 047844 110 ESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANGSGETPLYLAAARAHKEISAEILQKCPSPA 189 (264)
Q Consensus 110 ~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~ 189 (264)
++..|.||||+|+..|+.+++++|++.|+++ +..|..|+||||+|+..++.+++++|+++|++++
T Consensus 71 --------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 135 (165)
T 3twr_A 71 --------------KDKGGLVPLHNACSYGHYEVAELLVKHGAVV-NVADLWKFTPLHEAAAKGKYEICKLLLQHGADPT 135 (165)
T ss_dssp --------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred --------------cCCCCCCHHHHHHHcCcHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence 8899999999999999999999999999996 7889999999999999999999999999999999
Q ss_pred cCCCCCccHHhHHHhcCChHHHHHHHhhhC
Q 047844 190 HEGPNGKTALHAAVCSRSCAASRCHKLHRS 219 (264)
Q Consensus 190 ~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~ 219 (264)
.+|..|.||+++|.. ++.+++++|+..++
T Consensus 136 ~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 136 KKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp CCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred ccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 999999999999877 89999999987653
No 53
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.98 E-value=2.1e-31 Score=195.58 Aligned_cols=151 Identities=20% Similarity=0.244 Sum_probs=142.0
Q ss_pred CCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhch
Q 047844 34 KNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAPLHVAARYGHAAVVEALIEIAKQESDQEIESGV 113 (264)
Q Consensus 34 g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~ 113 (264)
..|+|+.|+ ..|+ .+++++|++.+.+. + .+..|.||||+|+..|+.+++++|++.|++++.
T Consensus 2 ~~~~L~~A~--~~g~--------~~~v~~Ll~~g~~~-~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------- 62 (153)
T 1awc_B 2 LGKKLLEAA--RAGQ--------DDEVRILMANGAPF-T-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDA------- 62 (153)
T ss_dssp HHHHHHHHH--HHTC--------HHHHHHHHHHTCCC-C-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTC-------
T ss_pred ccHHHHHHH--HcCC--------HHHHHHHHHcCCCC-C-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-------
Confidence 358999999 9999 99999999999873 3 688999999999999999999999999887544
Q ss_pred hhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHhhCCCCCcCCC
Q 047844 114 ESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANGSGETPLYLAAARAHKEISAEILQKCPSPAHEGP 193 (264)
Q Consensus 114 ~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~ 193 (264)
++..|.||||+|+..|+.+++++|++.|+++ +.+|..|+||||+|+..++.+++++|+++|++++.++.
T Consensus 63 ----------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 131 (153)
T 1awc_B 63 ----------RTKVDRTPLHMAASEGHANIVEVLLKHGADV-NAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSK 131 (153)
T ss_dssp ----------CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred ----------CCCCCCCHHHHHHHcChHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCC
Confidence 8899999999999999999999999999996 78899999999999999999999999999999999999
Q ss_pred CCccHHhHHHhcCChHHHHHH
Q 047844 194 NGKTALHAAVCSRSCAASRCH 214 (264)
Q Consensus 194 ~g~tpl~~A~~~~~~~~~~~l 214 (264)
.|.||+++|+..++.+++++|
T Consensus 132 ~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 132 FCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp TSCCHHHHHHHTTCHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHh
Confidence 999999999999999999987
No 54
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.98 E-value=2e-31 Score=200.71 Aligned_cols=162 Identities=21% Similarity=0.197 Sum_probs=150.1
Q ss_pred CCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhh
Q 047844 32 HKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAPLHVAARYGHAAVVEALIEIAKQESDQEIES 111 (264)
Q Consensus 32 ~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~ 111 (264)
..+.++|+.|+ ..|+ .+++++|++.++..++..+..|+||||+|+..|+.+++++|++.|++++.
T Consensus 3 ~~~~~~l~~A~--~~g~--------~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~----- 67 (179)
T 3f6q_A 3 PEFMDDIFTQC--REGN--------AVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINV----- 67 (179)
T ss_dssp ----CCHHHHH--HHTC--------HHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-----
T ss_pred HHHHHHHHHHH--HcCC--------HHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCC-----
Confidence 46789999999 9999 99999999997776889999999999999999999999999999988544
Q ss_pred chhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHhhCCCCCcC
Q 047844 112 GVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANGSGETPLYLAAARAHKEISAEILQKCPSPAHE 191 (264)
Q Consensus 112 ~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~ 191 (264)
++..|.||||+|+..|+.+++++|++.|+++ +..|..|.||||+|+..++.+++++|+++|++++.+
T Consensus 68 ------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~ 134 (179)
T 3f6q_A 68 ------------MNRGDDTPLHLAASHGHRDIVQKLLQYKADI-NAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSIC 134 (179)
T ss_dssp ------------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBC
T ss_pred ------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchh
Confidence 8899999999999999999999999999996 788999999999999999999999999999999999
Q ss_pred CCCCccHHhHHHhcCChHHHHHHHhhhCCC
Q 047844 192 GPNGKTALHAAVCSRSCAASRCHKLHRSSR 221 (264)
Q Consensus 192 ~~~g~tpl~~A~~~~~~~~~~~l~~~~~~~ 221 (264)
|..|.||+++|+..++.+++++|+.+++..
T Consensus 135 ~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~ 164 (179)
T 3f6q_A 135 NKYGEMPVDKAKAPLRELLRERAEKMGQNL 164 (179)
T ss_dssp CTTSCCGGGGSCHHHHHHHHHHHHHTTCCC
T ss_pred ccCCCCcHHHHHHHHHHHHHHHHHHhhcCc
Confidence 999999999999999999999999988654
No 55
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.98 E-value=2.8e-32 Score=220.31 Aligned_cols=182 Identities=14% Similarity=0.087 Sum_probs=164.7
Q ss_pred CcHHHHHHHcCCchHHhhhhhhcccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCC-Ch
Q 047844 2 NSDLYEAAAKGEIEPFNQLAIDRQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKG-DA 80 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g-~t 80 (264)
.||||+|+..|+.+++++|++.+...+..+..|.||||+|+ ..|+ .+++++|++.+.+ ++..+..| .|
T Consensus 63 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~--~~g~--------~~~v~~Ll~~ga~-~~~~~~~g~~t 131 (285)
T 3kea_A 63 EFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAV--DSGN--------MQTVKLFVKKNWR-LMFYGKTGWKT 131 (285)
T ss_dssp CCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHH--HTTC--------HHHHHHHHHHCGG-GGGCSSSGGGS
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHH--HcCC--------HHHHHHHHhcCCC-CCccCCCCCCC
Confidence 48999999999999999999944444448999999999999 9999 9999999999998 78899999 79
Q ss_pred HHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCC
Q 047844 81 PLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANG 160 (264)
Q Consensus 81 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~ 160 (264)
|||+|+..|+.+++++|++.|+.... ...|.||||+|+..|+.+++++|++.|+++ +..|.
T Consensus 132 ~L~~A~~~~~~~~v~~Ll~~g~~~~~------------------~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~-n~~~~ 192 (285)
T 3kea_A 132 SFYHAVMLNDVSIVSYFLSEIPSTFD------------------LAILLSCIHITIKNGHVDMMILLLDYMTST-NTNNS 192 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHTTSCTTCC------------------CSTHHHHHHHHHHTTCHHHHHHHHHHHHHT-CTTCC
T ss_pred HHHHHHHcCCHHHHHHHHhCCCcccc------------------ccCCccHHHHHHHcChHHHHHHHHHcCCCC-CcccC
Confidence 99999999999999999999876421 127899999999999999999999999995 78999
Q ss_pred CCCCH-HHHHHHhChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCChHHHHHHHhhhCC
Q 047844 161 SGETP-LYLAAARAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRSCAASRCHKLHRSS 220 (264)
Q Consensus 161 ~g~t~-Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~ 220 (264)
.|+|| ||+|+..++.+++++|+++|++++..+. .|+..++.+++++|+.++..
T Consensus 193 ~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~-------~a~~~~~~~iv~~Ll~~g~~ 246 (285)
T 3kea_A 193 LLFIPDIKLAIDNKDIEMLQALFKYDINIYSANL-------ENVLLDDAEIAKMIIEKHVE 246 (285)
T ss_dssp CBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG-------GGGTTTCHHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh-------hhhhcCCHHHHHHHHHcCCC
Confidence 99998 9999999999999999999999999883 56789999999999998864
No 56
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.97 E-value=2.5e-31 Score=197.92 Aligned_cols=158 Identities=18% Similarity=0.144 Sum_probs=146.3
Q ss_pred CcHHHHHHHcCCchHHhhhhhhcccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChH
Q 047844 2 NSDLYEAAAKGEIEPFNQLAIDRQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAP 81 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~ 81 (264)
.||||+|+..|+.+++++|++.+...+..|..|.||||+|+ ..|+ .+++++|++.+.+ ++..+..|.||
T Consensus 4 ~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~--~~~~--------~~~v~~Ll~~g~~-~~~~~~~g~t~ 72 (167)
T 3v31_A 4 SLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAA--AHGQ--------IAVVEFLLQNGAD-PQLLGKGRESA 72 (167)
T ss_dssp CCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHH--HTTC--------HHHHHHHHHTTCC-TTCCCTTCCCH
T ss_pred cchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHH--HCCC--------HHHHHHHHHcCCC-CCCcCCCCCcH
Confidence 58999999999999999999955555568999999999999 9999 9999999999988 78889999999
Q ss_pred HHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCC
Q 047844 82 LHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANGS 161 (264)
Q Consensus 82 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~ 161 (264)
||+|+..|+.+++++|++.|++++. ++..|.||||+|+..|+.+++++|++.|+++ +..|..
T Consensus 73 L~~A~~~~~~~~v~~Ll~~g~~~~~-----------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~ 134 (167)
T 3v31_A 73 LSLACSKGYTDIVKMLLDCGVDVNE-----------------YDWNGGTPLLYAVHGNHVKCVKMLLESGADP-TIETDS 134 (167)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCCTTC-----------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTT
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCc-----------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCC
Confidence 9999999999999999999988544 8899999999999999999999999999996 788999
Q ss_pred CCCHHHHHHHhChHHHHHHHHhhCCCC
Q 047844 162 GETPLYLAAARAHKEISAEILQKCPSP 188 (264)
Q Consensus 162 g~t~Lh~A~~~~~~~~~~~Ll~~ga~~ 188 (264)
|.||||+|+..|+.+++++|+++++++
T Consensus 135 g~t~l~~A~~~~~~~~~~~L~~~~~~~ 161 (167)
T 3v31_A 135 GYNSMDLAVALGYRSVQQVIESHLLKL 161 (167)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 999999999999999999999987554
No 57
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.97 E-value=1e-30 Score=204.70 Aligned_cols=165 Identities=21% Similarity=0.229 Sum_probs=148.2
Q ss_pred CCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHh-CCccceecCCCCChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhh
Q 047844 33 KKNTVLHVNIIASYTQNKEGESVSTKFVERIIEM-CPSLLLQVNAKGDAPLHVAARYGHAAVVEALIEIAKQESDQEIES 111 (264)
Q Consensus 33 ~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~-~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~ 111 (264)
.|.||||.|+ ..|+ .+++++|++. +.+ ++..|..|+||||+|+..|+.+++++|++.|++....
T Consensus 2 ~g~t~L~~A~--~~g~--------~~~v~~Ll~~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~---- 66 (232)
T 2rfa_A 2 IWESPLLLAA--KEND--------VQALSKLLKFEGCE-VHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFE---- 66 (232)
T ss_dssp CTTCHHHHHH--HTTC--------HHHHHHHHTTTCSC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGC----
T ss_pred CCCCHHHHHH--HcCC--------HHHHHHHHHhcCCC-cccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccc----
Confidence 5899999999 9999 9999999998 666 8899999999999999999999999999999875321
Q ss_pred chhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCC-------------CCCCHHHHHHHhChHHHH
Q 047844 112 GVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANG-------------SGETPLYLAAARAHKEIS 178 (264)
Q Consensus 112 ~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~-------------~g~t~Lh~A~~~~~~~~~ 178 (264)
..+..+..|.||||+|+..|+.+++++|++.|+++ +..+. .|+||||+|+..|+.+++
T Consensus 67 --------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v 137 (232)
T 2rfa_A 67 --------PMTSELYEGQTALHIAVINQNVNLVRALLARGASV-SARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIV 137 (232)
T ss_dssp --------CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHH
T ss_pred --------cccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCC-CcccCCcceeecccccccCCCCHHHHHHHcCCHHHH
Confidence 02346788999999999999999999999999986 45544 799999999999999999
Q ss_pred HHHHhhCCCCCcCCCCCccHHhHHHhcCChHHH----HHHHhhhCCC
Q 047844 179 AEILQKCPSPAHEGPNGKTALHAAVCSRSCAAS----RCHKLHRSSR 221 (264)
Q Consensus 179 ~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~----~~l~~~~~~~ 221 (264)
++|+++|++++.+|..|.||||+|+..++.+++ ++|+.+++..
T Consensus 138 ~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~ 184 (232)
T 2rfa_A 138 RLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGD 184 (232)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSC
T ss_pred HHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCch
Confidence 999999999999999999999999999999988 8888887643
No 58
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.97 E-value=4.9e-31 Score=196.83 Aligned_cols=155 Identities=22% Similarity=0.294 Sum_probs=142.8
Q ss_pred CcHHHHHHHcCCchHHhhhhhhcccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChH
Q 047844 2 NSDLYEAAAKGEIEPFNQLAIDRQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAP 81 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~ 81 (264)
.++|++||..|+.+++++|++.+...+..+..|.||||.|+ ..|+ .+++++|++.+.+ ++..|..|.||
T Consensus 15 ~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~~~--------~~~v~~Ll~~g~~-~~~~~~~g~t~ 83 (169)
T 2y1l_E 15 GKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAA--FNGH--------LEIVEVLLKNGAD-VNAVDHAGMTP 83 (169)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH--HTTC--------HHHHHHHHHTTCC-TTCCCTTSCCH
T ss_pred cchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH--HcCC--------HHHHHHHHHcCCC-CCccCCCCCCH
Confidence 36899999999999999999954444558899999999999 9999 9999999999988 78899999999
Q ss_pred HHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCC
Q 047844 82 LHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANGS 161 (264)
Q Consensus 82 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~ 161 (264)
||+|+..|+.+++++|+++|++++. ++..|.||||+|+..|+.+++++|+++|+++ +.+|..
T Consensus 84 L~~A~~~~~~~~~~~Ll~~g~~~~~-----------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~ 145 (169)
T 2y1l_E 84 LRLAALFGHLEIVEVLLKNGADVNA-----------------NDMEGHTPLHLAAMFGHLEIVEVLLKNGADV-NAQDKF 145 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTC-----------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCC-----------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCC
Confidence 9999999999999999999988544 8899999999999999999999999999995 788999
Q ss_pred CCCHHHHHHHhChHHHHHHHHhhC
Q 047844 162 GETPLYLAAARAHKEISAEILQKC 185 (264)
Q Consensus 162 g~t~Lh~A~~~~~~~~~~~Ll~~g 185 (264)
|.||||+|+..++.+++++|+++|
T Consensus 146 g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 146 GKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcC
Confidence 999999999999999999999876
No 59
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.97 E-value=1e-30 Score=216.03 Aligned_cols=188 Identities=16% Similarity=0.162 Sum_probs=162.8
Q ss_pred CcHHHHHHHcCCchHHhhhhhh---ccc-------ccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHh-CCcc
Q 047844 2 NSDLYEAAAKGEIEPFNQLAID---RQL-------GSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEM-CPSL 70 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~---~~~-------~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~-~~~~ 70 (264)
.||||+|+..|+.+++++|++. .+. ....+..|.||||+|+ ..|+ .+++++|++. +.+
T Consensus 126 ~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~--~~g~--------~~~v~~LL~~~gad- 194 (337)
T 4g8k_A 126 FTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAA--EKGH--------VEVLKILLDEMGAD- 194 (337)
T ss_dssp CBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHH--HHTC--------HHHHHHHHHHSCCC-
T ss_pred CCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHH--HCCC--------HHHHHHHHhccCCC-
Confidence 4899999999999999999982 222 1124567999999999 9999 9999999976 566
Q ss_pred ceecCCCCChHHHHHHHhCC----HHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHH
Q 047844 71 LLQVNAKGDAPLHVAARYGH----AAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKI 146 (264)
Q Consensus 71 ~~~~~~~g~t~L~~A~~~g~----~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~ 146 (264)
++..|..|.|+++.++..+. ..++++|+++|++++. ++..|.||||+|+..|+.+++++
T Consensus 195 ~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~-----------------~d~~g~t~L~~a~~~~~~~~v~~ 257 (337)
T 4g8k_A 195 VNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNV-----------------RGERGKTPLILAVEKKHLGLVQR 257 (337)
T ss_dssp TTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTC-----------------CCGGGCCHHHHHHHTTCHHHHHH
T ss_pred cCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCC-----------------cCCCCCCHHHHHHHhhhhHHHHH
Confidence 88999999999999887654 4688999999988544 88999999999999999999999
Q ss_pred HhcC-CCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCChHHHHHHHhhhCCCCC
Q 047844 147 LLGA-DPAFPYSANGSGETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRSCAASRCHKLHRSSRFL 223 (264)
Q Consensus 147 Ll~~-g~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~~~~ 223 (264)
|++. |+++ +.+|..|+||||+|+..|+.+++++|+++|++++.+ +||++|+.+++.+++++|+.+|+...+
T Consensus 258 Ll~~~~~~v-n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~-----~~L~~A~~~~~~~iv~~Ll~~GA~~d~ 329 (337)
T 4g8k_A 258 LLEQEHIEI-NDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG-----DLVMTARRNYDHSLVKVLLSHGAKEDF 329 (337)
T ss_dssp HHTSTTCCT-TCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTC-----CHHHHHHHTTCHHHHHHHHHTTCCC--
T ss_pred HHHhcCCcc-cCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC-----CHHHHHHHcCCHHHHHHHHHCcCCCCC
Confidence 9985 6775 789999999999999999999999999999998764 599999999999999999999976543
No 60
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.97 E-value=6.3e-32 Score=225.52 Aligned_cols=194 Identities=15% Similarity=0.132 Sum_probs=164.1
Q ss_pred CcHHHHHHHcCCchHHhhhhhh----cccccc-----------------cCCCCCchhHHHHHHhhh--cCcCCCcccHH
Q 047844 2 NSDLYEAAAKGEIEPFNQLAID----RQLGSL-----------------VTHKKNTVLHVNIIASYT--QNKEGESVSTK 58 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~----~~~~~~-----------------~~~~g~t~L~~A~~~~~g--~~~~~~~~~~~ 58 (264)
.||||+|+..|+.+++++|++. ....+. .+..|.||||+|+ ..| + .+
T Consensus 85 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~--~~g~~~--------~~ 154 (364)
T 3ljn_A 85 QKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCV--GLGPEY--------LE 154 (364)
T ss_dssp BCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHH--HSCGGG--------HH
T ss_pred CCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHH--HcCCch--------HH
Confidence 3677777777777777777773 222222 5778999999999 999 9 99
Q ss_pred HHHHHHHhCCccceecCCCCChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhc
Q 047844 59 FVERIIEMCPSLLLQVNAKGDAPLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQS 138 (264)
Q Consensus 59 ~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~ 138 (264)
++++|++.+.+ ++..|..|.||||+|+..|+.+++++|++.|++... ..++..+..|.||||+|+..
T Consensus 155 ~v~~Ll~~ga~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~------------~~~~~~~~~g~t~L~~A~~~ 221 (364)
T 3ljn_A 155 MIKILVQLGAS-PTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSS------------LRLDYANKQGNSHLHWAILI 221 (364)
T ss_dssp HHHHHHHHTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSS------------CCTTCCCTTCCCTTHHHHTT
T ss_pred HHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHhccccccc------------ccccccCCCCCcHHHHHHHc
Confidence 99999999998 789999999999999999999999999999987211 11344889999999999999
Q ss_pred CCHHHHHHHhcCCCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHhhCCCCCc------------CCCCCccHHhHHHhcC
Q 047844 139 GSLDVVKILLGADPAFPYSANGSGETPLYLAAARAHKEISAEILQKCPSPAH------------EGPNGKTALHAAVCSR 206 (264)
Q Consensus 139 ~~~~~~~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~------------~~~~g~tpl~~A~~~~ 206 (264)
|+.+++++|++.|+++ +..|..|+||||+|+..|+.+++++|+++|++++. .+..+++|++.|+..+
T Consensus 222 g~~~~v~~Ll~~gad~-~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~ 300 (364)
T 3ljn_A 222 NWEDVAMRFVEMGIDV-NMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADP 300 (364)
T ss_dssp TCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCCH
T ss_pred CCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccccccccccchhhhhcc
Confidence 9999999999999996 78999999999999999999999999999876432 4557889999999999
Q ss_pred ChHHHHHHHhhhC
Q 047844 207 SCAASRCHKLHRS 219 (264)
Q Consensus 207 ~~~~~~~l~~~~~ 219 (264)
+.+.+..|+..+.
T Consensus 301 ~~~~v~~ll~~~~ 313 (364)
T 3ljn_A 301 SKQEVLQLLQEKL 313 (364)
T ss_dssp HHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 8888877766654
No 61
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=1.1e-31 Score=210.87 Aligned_cols=177 Identities=21% Similarity=0.198 Sum_probs=156.6
Q ss_pred CcHHHHHHHcCCchHHhhhhhhcccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCc-----cceecCC
Q 047844 2 NSDLYEAAAKGEIEPFNQLAIDRQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPS-----LLLQVNA 76 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~-----~~~~~~~ 76 (264)
.||||+|+..|+.+++++|++.+...+..+..|.||||+|+ ..|+ .+++++|++.+.+ .++..+.
T Consensus 46 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~~~--------~~~v~~Ll~~~~~~~~~~~~~~~~~ 115 (236)
T 1ikn_D 46 QTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLAC--EQGC--------LASVGVLTQSCTTPHLHSILKATNY 115 (236)
T ss_dssp CCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHH--HHTC--------HHHHHHHHHSTTTTSSSCGGGCCCT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH--HcCC--------HHHHHHHHhcccchhHHHHhhccCC
Confidence 48999999999999999999944444458999999999999 9999 9999999998853 3577888
Q ss_pred CCChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCC-CCCChhhHHHhcCCHHHHHHHhcCCCCCC
Q 047844 77 KGDAPLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKND-EEDTALHEAVQSGSLDVVKILLGADPAFP 155 (264)
Q Consensus 77 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~ 155 (264)
.|.||||+|+..|+.+++++|++.|++++. ++. .|.||||+|+..|+.+++++|++.|+++
T Consensus 116 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-----------------~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~- 177 (236)
T 1ikn_D 116 NGHTCLHLASIHGYLGIVELLVSLGADVNA-----------------QEPCNGRTALHLAVDLQNPDLVSLLLKCGADV- 177 (236)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHHTCCTTC-----------------CCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCS-
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-----------------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-
Confidence 999999999999999999999999988654 776 8999999999999999999999999996
Q ss_pred CCCCCCCCCHHHHHHHhChHHHHHHHHhhCCCCC--cCCCCCccHHhHHHhcC
Q 047844 156 YSANGSGETPLYLAAARAHKEISAEILQKCPSPA--HEGPNGKTALHAAVCSR 206 (264)
Q Consensus 156 ~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~--~~~~~g~tpl~~A~~~~ 206 (264)
+..|..|+||||+|+..++.+++++|+++|++.. ..+..|.+|.+.+....
T Consensus 178 ~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~ 230 (236)
T 1ikn_D 178 NRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTESEFT 230 (236)
T ss_dssp CCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCCC----
T ss_pred CcccCCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHHHhhhcccc
Confidence 7899999999999999999999999999999766 67888888887765443
No 62
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=5.2e-31 Score=200.67 Aligned_cols=155 Identities=18% Similarity=0.159 Sum_probs=144.1
Q ss_pred CcHHHHHHHcCCchHHhhhhhhcccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChH
Q 047844 2 NSDLYEAAAKGEIEPFNQLAIDRQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAP 81 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~ 81 (264)
.||||+|+..|+.+++++|++.+...+..+..|.||||+|+ ..|+ .+++++|++.+.+ ++..|..|.||
T Consensus 36 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~--~~~~--------~~~v~~Ll~~g~~-~~~~~~~g~t~ 104 (192)
T 2rfm_A 36 RTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAV--KNNR--------LGIAEKLLSKGSN-VNTKDFSGKTP 104 (192)
T ss_dssp CCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHH--HTTC--------HHHHHHHHHHTCC-TTCCCTTSCCH
T ss_pred CCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHH--HcCC--------HHHHHHHHHCCCC-CCCCCCCCCcH
Confidence 58999999999999999999954444558899999999999 9999 9999999999988 78899999999
Q ss_pred HHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCC
Q 047844 82 LHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANGS 161 (264)
Q Consensus 82 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~ 161 (264)
||+|+..|+.+++++|++.|++++. ++..|.||||+|+..|+.+++++|++.|+++ +.+|..
T Consensus 105 L~~A~~~~~~~~v~~Ll~~g~~~~~-----------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~ 166 (192)
T 2rfm_A 105 LMWSIIFGYSEMSYFLLEHGANVND-----------------RNLEGETPLIVASKYGRSEIVKKLLELGADI-SARDLT 166 (192)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSSC-----------------CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTT
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCC-----------------CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCC
Confidence 9999999999999999999988554 8999999999999999999999999999996 788999
Q ss_pred CCCHHHHHHHhChHHHHHHHHhhC
Q 047844 162 GETPLYLAAARAHKEISAEILQKC 185 (264)
Q Consensus 162 g~t~Lh~A~~~~~~~~~~~Ll~~g 185 (264)
|.||+|+|+..|+.+++++|+++|
T Consensus 167 g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 167 GLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp SCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCHHHHHHHhCcHHHHHHHHhcc
Confidence 999999999999999999999875
No 63
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.97 E-value=4.3e-31 Score=198.92 Aligned_cols=165 Identities=19% Similarity=0.176 Sum_probs=151.8
Q ss_pred CcHHHHHHHcCCchHHhhhhhh-cccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCCh
Q 047844 2 NSDLYEAAAKGEIEPFNQLAID-RQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDA 80 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~-~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t 80 (264)
.++||.||..|+.+++++|++. +...+..+..|.||||+|+ ..|+ .+++++|++.+.+ ++..+..|+|
T Consensus 6 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~--~~~~--------~~~v~~Ll~~g~~-~~~~~~~g~t 74 (179)
T 3f6q_A 6 MDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWAC--REGR--------SAVVEMLIMRGAR-INVMNRGDDT 74 (179)
T ss_dssp -CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHH--HTTC--------HHHHHHHHHTTCC-TTCCCTTCCC
T ss_pred HHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHH--HcCc--------HHHHHHHHHcCCC-CCCcCCCCCC
Confidence 4789999999999999999983 4445558999999999999 9999 9999999999988 7889999999
Q ss_pred HHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCC
Q 047844 81 PLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANG 160 (264)
Q Consensus 81 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~ 160 (264)
|||+|+..|+.+++++|++.|++++. ++..|.||||+|+..|+.+++++|++.|+++ +..|.
T Consensus 75 ~L~~A~~~~~~~~v~~Ll~~g~~~~~-----------------~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~ 136 (179)
T 3f6q_A 75 PLHLAASHGHRDIVQKLLQYKADINA-----------------VNEHGNVPLHYACFWGQDQVAEDLVANGALV-SICNK 136 (179)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTC-----------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS-SBCCT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCc-----------------cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCc-chhcc
Confidence 99999999999999999999988544 8999999999999999999999999999995 78999
Q ss_pred CCCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCC
Q 047844 161 SGETPLYLAAARAHKEISAEILQKCPSPAHEGPNG 195 (264)
Q Consensus 161 ~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g 195 (264)
.|.||+|+|+..++.+++++|+++|++++..+..+
T Consensus 137 ~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~~~~~~ 171 (179)
T 3f6q_A 137 YGEMPVDKAKAPLRELLRERAEKMGQNLNRIPYKD 171 (179)
T ss_dssp TSCCGGGGSCHHHHHHHHHHHHHTTCCCSCBCCCC
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHhhcCcccCCccc
Confidence 99999999999999999999999999998876544
No 64
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.97 E-value=9e-31 Score=192.68 Aligned_cols=154 Identities=18% Similarity=0.253 Sum_probs=143.7
Q ss_pred CCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhch
Q 047844 34 KNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAPLHVAARYGHAAVVEALIEIAKQESDQEIESGV 113 (264)
Q Consensus 34 g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~ 113 (264)
+.||||.|+ ..|+ .+++++|++.....++..+..|.||||+ +..|+.+++++|++.|++++.
T Consensus 2 ~~~~L~~A~--~~g~--------~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~------- 63 (156)
T 1bd8_A 2 AGDRLSGAA--ARGD--------VQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNV------- 63 (156)
T ss_dssp HHHHHHHHH--HHTC--------HHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTC-------
T ss_pred cchHHHHHH--HhCC--------HHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCC-------
Confidence 468999999 9999 9999999999443478899999999999 999999999999999988544
Q ss_pred hhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHhhCCCCCcCCC
Q 047844 114 ESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANGSGETPLYLAAARAHKEISAEILQKCPSPAHEGP 193 (264)
Q Consensus 114 ~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~ 193 (264)
++..|.||||+|+..|+.+++++|++.|+++ +..|..|+||||+|+..|+.+++++|++. ++++.+|.
T Consensus 64 ----------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~ 131 (156)
T 1bd8_A 64 ----------QDTSGTSPVHDAARTGFLDTLKVLVEHGADV-NVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDA 131 (156)
T ss_dssp ----------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCT
T ss_pred ----------cCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCC
Confidence 8899999999999999999999999999995 78899999999999999999999999999 99999999
Q ss_pred CCccHHhHHHhcCChHHHHHHHhh
Q 047844 194 NGKTALHAAVCSRSCAASRCHKLH 217 (264)
Q Consensus 194 ~g~tpl~~A~~~~~~~~~~~l~~~ 217 (264)
.|.||+++|+..++.+++++|+.+
T Consensus 132 ~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 132 RGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp TSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred CCCCHHHHHHHcCcHHHHHHHHhh
Confidence 999999999999999999999764
No 65
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=2.7e-31 Score=218.59 Aligned_cols=179 Identities=17% Similarity=0.122 Sum_probs=132.0
Q ss_pred HHHHHHcCCchHHhhhhhhcccccc-cCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChHHH
Q 047844 5 LYEAAAKGEIEPFNQLAIDRQLGSL-VTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAPLH 83 (264)
Q Consensus 5 l~~A~~~g~~~~~~~l~~~~~~~~~-~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~ 83 (264)
+|.|+..+..++++.|++.+-..+. .|..|.||||+|+ ..|+ .+++++|++.+++ ++.+|..|+||||
T Consensus 101 ~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa--~~g~--------~~~v~~Ll~~Gad-~n~~d~~g~TpLh 169 (327)
T 1sw6_A 101 QHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLT--SIAN--------LELVKHLVKHGSN-RLYGDNMGESCLV 169 (327)
T ss_dssp ---CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHH--HTTC--------HHHHHHHHHTTCC-TTBCCTTCCCHHH
T ss_pred hHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHH--HcCC--------HHHHHHHHHcCCC-CCCcCCCCCCHHH
Confidence 4666777777888888884444444 6999999999999 9999 9999999999999 7899999999999
Q ss_pred HHHHhCC---HHHHHHHHHHh-hhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHh----cCCHHHHHHHhcC-----
Q 047844 84 VAARYGH---AAVVEALIEIA-KQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQ----SGSLDVVKILLGA----- 150 (264)
Q Consensus 84 ~A~~~g~---~~~v~~Ll~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~----~~~~~~~~~Ll~~----- 150 (264)
+|+..|+ .++++.|++.+ ++ ++.++..|.||||+|+. .|+.+++++|++.
T Consensus 170 ~A~~~g~~~~~~~~~~ll~~~~~~-----------------~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~ 232 (327)
T 1sw6_A 170 KAVKSVNNYDSGTFEALLDYLYPC-----------------LILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWI 232 (327)
T ss_dssp HHHHSSHHHHTTCHHHHHHHHGGG-----------------GGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHH
T ss_pred HHHHhcccccHHHHHHHHHhhhcc-----------------ccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHH
Confidence 9999998 78888888887 43 34589999999999999 8999999999976
Q ss_pred ---------------CCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCChHHHHHHH
Q 047844 151 ---------------DPAFPYSANGSGETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRSCAASRCHK 215 (264)
Q Consensus 151 ---------------g~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~ 215 (264)
|+++ +..+..|+||||.|+. +++|+++ +++.+|..|+||||+|+..|+.+++++|+
T Consensus 233 ~~~~~~~i~~~~~~~g~~~-~~~~~~g~t~L~~a~~------~~~Ll~~--~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll 303 (327)
T 1sw6_A 233 VKKQNRPIQSGTNEKESKP-NDKNGERKDSILENLD------LKWIIAN--MLNAQDSNGDTCLNIAARLGNISIVDALL 303 (327)
T ss_dssp HHGGGCCEEEC-----------------CHHHHHCS------HHHHHHH--TTTCCCTTSCCHHHHHHHHCCHHHHHHHH
T ss_pred hcccchHHHhhhhcccCCc-ccccccCCChhHHHHH------HHHHHHh--CCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 5553 4566666777766654 5666666 46666666677777777777777776666
Q ss_pred hhhCC
Q 047844 216 LHRSS 220 (264)
Q Consensus 216 ~~~~~ 220 (264)
.+++.
T Consensus 304 ~~Gad 308 (327)
T 1sw6_A 304 DYGAD 308 (327)
T ss_dssp HTTCC
T ss_pred HcCCC
Confidence 66654
No 66
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=4.3e-30 Score=188.54 Aligned_cols=150 Identities=21% Similarity=0.249 Sum_probs=138.1
Q ss_pred CcHHHHHHHcCCchHHhhhhhhcccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChH
Q 047844 2 NSDLYEAAAKGEIEPFNQLAIDRQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAP 81 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~ 81 (264)
.++||.|+..|+.+++++|++.+.... .+..|.||||.|+ ..|+ .+++++|++.+.+ ++..+..|+||
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~--~~~~--------~~~v~~Ll~~g~~-~~~~~~~g~t~ 70 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAA--QYGH--------FSTTEVLLRAGVS-RDARTKVDRTP 70 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHH--HHTC--------HHHHHHHHTTTCC-TTCCCTTCCCH
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHH--HcCC--------HHHHHHHHHcCCC-CCCCCCCCCCH
Confidence 579999999999999999999433222 5888999999999 9999 9999999999988 78899999999
Q ss_pred HHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCC
Q 047844 82 LHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANGS 161 (264)
Q Consensus 82 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~ 161 (264)
||+|+..|+.+++++|+++|++++. ++..|.||||+|+..|+.+++++|++.|+++ +.+|..
T Consensus 71 L~~A~~~~~~~~v~~Ll~~g~~~~~-----------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~ 132 (153)
T 1awc_B 71 LHMAASEGHANIVEVLLKHGADVNA-----------------KDMLKMTALHWATEHNHQEVVELLIKYGADV-HTQSKF 132 (153)
T ss_dssp HHHHHHHTCHHHHHHHHTTTCCTTC-----------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTT
T ss_pred HHHHHHcChHHHHHHHHHcCCCCCC-----------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCC
Confidence 9999999999999999999988544 8899999999999999999999999999996 788999
Q ss_pred CCCHHHHHHHhChHHHHHHH
Q 047844 162 GETPLYLAAARAHKEISAEI 181 (264)
Q Consensus 162 g~t~Lh~A~~~~~~~~~~~L 181 (264)
|.||||+|+..|+.+++++|
T Consensus 133 g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 133 CKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp SCCHHHHHHHTTCHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHh
Confidence 99999999999999999987
No 67
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.97 E-value=1.3e-30 Score=193.66 Aligned_cols=155 Identities=26% Similarity=0.361 Sum_probs=140.3
Q ss_pred CcHHHHHHHcCCchHHhhhhh-hcccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCCh
Q 047844 2 NSDLYEAAAKGEIEPFNQLAI-DRQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDA 80 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~-~~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t 80 (264)
+++||.|+..|+.++++.|++ ........+..|.||||+|+ ..|+ .+++++|++.+.+ ++..|..|+|
T Consensus 9 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~--~~~~--------~~~v~~Ll~~g~~-~~~~~~~g~t 77 (165)
T 3twr_A 9 DRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAA--GYNR--------VSVVEYLLQHGAD-VHAKDKGGLV 77 (165)
T ss_dssp HHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHH--HTTC--------HHHHHHHHHTTCC-TTCCCTTSCC
T ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHH--HcCh--------HHHHHHHHhcCCC-CCccCCCCCC
Confidence 479999999999999999998 33333446788999999999 9999 9999999999998 7889999999
Q ss_pred HHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCC
Q 047844 81 PLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANG 160 (264)
Q Consensus 81 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~ 160 (264)
|||+|+..|+.+++++|++.|++++. ++..|.||||+|+..|+.+++++|++.|+++ +.+|.
T Consensus 78 ~L~~A~~~~~~~~v~~Ll~~g~~~~~-----------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~ 139 (165)
T 3twr_A 78 PLHNACSYGHYEVAELLVKHGAVVNV-----------------ADLWKFTPLHEAAAKGKYEICKLLLQHGADP-TKKNR 139 (165)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTC-----------------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT
T ss_pred HHHHHHHcCcHHHHHHHHhCCCCCCC-----------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-cccCC
Confidence 99999999999999999999988544 8899999999999999999999999999995 78999
Q ss_pred CCCCHHHHHHHhChHHHHHHHHhhCC
Q 047844 161 SGETPLYLAAARAHKEISAEILQKCP 186 (264)
Q Consensus 161 ~g~t~Lh~A~~~~~~~~~~~Ll~~ga 186 (264)
.|.||+|+|+. ++.+++++|++.|+
T Consensus 140 ~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 140 DGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp TSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred CCCChhHhHhc-CChHHHHHHhhccc
Confidence 99999999877 88999999998875
No 68
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=2.1e-29 Score=192.89 Aligned_cols=163 Identities=21% Similarity=0.216 Sum_probs=150.0
Q ss_pred CCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChHHHHHHHhCCHHHHHHHHHHhhhcchhhhh
Q 047844 31 THKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAPLHVAARYGHAAVVEALIEIAKQESDQEIE 110 (264)
Q Consensus 31 ~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~ 110 (264)
+..+.||||.|+ ..|+ .+.++.|++.+...++..|..|.||||+|+..|+.+++++|++.|++++.
T Consensus 2 ~~~~~~~L~~A~--~~g~--------~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~---- 67 (201)
T 3hra_A 2 KTYEVGALLEAA--NQRD--------TKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINL---- 67 (201)
T ss_dssp -CCCTTHHHHHH--HTTC--------HHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC----
T ss_pred CcccccHHHHHH--Hhcc--------HHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC----
Confidence 457899999999 9999 99999999999855889999999999999999999999999999988554
Q ss_pred hchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhc-CCCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHhhC-CCC
Q 047844 111 SGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLG-ADPAFPYSANGSGETPLYLAAARAHKEISAEILQKC-PSP 188 (264)
Q Consensus 111 ~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g-a~~ 188 (264)
++..|.||||+|+..|+.+++++|++ .+.+ .+..+..|.||||+|+..++.+++++|++.| +++
T Consensus 68 -------------~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 133 (201)
T 3hra_A 68 -------------QNSISDSPYLYAGAQGRTEILAYMLKHATPD-LNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDI 133 (201)
T ss_dssp -------------CCTTSCCHHHHHHHTTCHHHHHHHHHHSCCC-TTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCT
T ss_pred -------------CCCCCCCHHHHHHHcCCHHHHHHHHhccCcc-cccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence 88999999999999999999999995 4555 4788999999999999999999999999999 999
Q ss_pred CcCCCCCccHHhHHHhcCC-----hHHHHHHHhhhCCC
Q 047844 189 AHEGPNGKTALHAAVCSRS-----CAASRCHKLHRSSR 221 (264)
Q Consensus 189 ~~~~~~g~tpl~~A~~~~~-----~~~~~~l~~~~~~~ 221 (264)
+.++..|.||||+|+..++ .+++++|+.+++..
T Consensus 134 ~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~ 171 (201)
T 3hra_A 134 DFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQ 171 (201)
T ss_dssp TCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCT
T ss_pred CCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCC
Confidence 9999999999999999998 99999999987653
No 69
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.97 E-value=9.2e-30 Score=187.27 Aligned_cols=152 Identities=23% Similarity=0.306 Sum_probs=139.4
Q ss_pred CcHHHHHHHcCCchHHhhhhhh-cccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCCh
Q 047844 2 NSDLYEAAAKGEIEPFNQLAID-RQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDA 80 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~-~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t 80 (264)
.+|||.|+..|+.+++++|++. ....+..+..|.||||+ + ..|+ .+++++|++.+.+ ++..|..|.|
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~--~~~~--------~~~v~~Ll~~g~~-~~~~~~~g~t 70 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-M--MFGS--------TAIALELLKQGAS-PNVQDTSGTS 70 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-S--CTTC--------HHHHHHHHHTTCC-TTCCCTTSCC
T ss_pred chHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-H--HcCC--------HHHHHHHHHCCCC-CCCcCCCCCC
Confidence 4799999999999999999984 22445578999999999 9 9999 9999999999998 7889999999
Q ss_pred HHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCC
Q 047844 81 PLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANG 160 (264)
Q Consensus 81 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~ 160 (264)
|||+|+..|+.+++++|++.|++++. ++..|.||||+|+..|+.+++++|++. +++ +..|.
T Consensus 71 ~L~~A~~~~~~~~v~~Ll~~g~~~~~-----------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~-~~~~~ 131 (156)
T 1bd8_A 71 PVHDAARTGFLDTLKVLVEHGADVNV-----------------PDGTGALPIHLAVQEGHTAVVSFLAAE-SDL-HRRDA 131 (156)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCSCC-----------------CCTTSCCHHHHHHHHTCHHHHHHHHTT-SCT-TCCCT
T ss_pred HHHHHHHcCcHHHHHHHHHcCCCCCC-----------------cCCCCCcHHHHHHHhChHHHHHHHHhc-cCC-CCcCC
Confidence 99999999999999999999988554 889999999999999999999999999 774 78899
Q ss_pred CCCCHHHHHHHhChHHHHHHHHhh
Q 047844 161 SGETPLYLAAARAHKEISAEILQK 184 (264)
Q Consensus 161 ~g~t~Lh~A~~~~~~~~~~~Ll~~ 184 (264)
.|.||||+|+..|+.+++++|+++
T Consensus 132 ~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 132 RGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp TSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred CCCCHHHHHHHcCcHHHHHHHHhh
Confidence 999999999999999999999875
No 70
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.97 E-value=4.5e-33 Score=217.90 Aligned_cols=182 Identities=18% Similarity=0.137 Sum_probs=114.2
Q ss_pred cHHHHHHHcCCchHHhhhhhhcccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChHH
Q 047844 3 SDLYEAAAKGEIEPFNQLAIDRQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAPL 82 (264)
Q Consensus 3 ~~l~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L 82 (264)
||||+|+..|+.+++++|++.+...+..|..|.||||+|+ ..|+ .+++++|++.+.+ ++..|..|+|||
T Consensus 23 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~--~~g~--------~~~v~~Ll~~ga~-~n~~d~~g~tpL 91 (229)
T 2vge_A 23 VLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAI--CGAN--------YSIVDFLITAGAN-VNSPDSHGWTPL 91 (229)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHH--HTTC--------HHHHHHHHHTTCC-TTCCCTTCCCHH
T ss_pred HHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHH--HcCC--------HHHHHHHHHCCCC-CCCCCCCCCCHH
Confidence 4566666666666666666632223335666666666666 6666 6666666666665 556666666666
Q ss_pred HHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCC-CCCCChhhHH--HhcCCHHHHHHHhcCCCCCCCCCC
Q 047844 83 HVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKN-DEEDTALHEA--VQSGSLDVVKILLGADPAFPYSAN 159 (264)
Q Consensus 83 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~g~t~L~~A--~~~~~~~~~~~Ll~~g~~~~~~~~ 159 (264)
|+|+..|+.+++++|++.|++++. ++ ..|.||||+| +..|+.+++++|++.|+++ +..|
T Consensus 92 h~A~~~g~~~~v~~Ll~~ga~~~~-----------------~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~-~~~~ 153 (229)
T 2vge_A 92 HCAASCNDTVICMALVQHGAAIFA-----------------TTLSDGATAFEKCDPYREGYADCATYLADVEQSM-GLMN 153 (229)
T ss_dssp HHHHHTTCHHHHHHHHTTTCCTTC-----------------CCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHT-TTSG
T ss_pred HHHHHcCCHHHHHHHHHcCCCccc-----------------ccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCc-cccc
Confidence 666666666666666666655433 33 4666666666 6666666666666666664 4555
Q ss_pred CCCCCHHHHHHHhChHHHHHHHHhhCCC--CCcCCCCCccHHhHHHhcCChHHHHHHHh
Q 047844 160 GSGETPLYLAAARAHKEISAEILQKCPS--PAHEGPNGKTALHAAVCSRSCAASRCHKL 216 (264)
Q Consensus 160 ~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~--~~~~~~~g~tpl~~A~~~~~~~~~~~l~~ 216 (264)
..|.||++.++..+. .++|++.|++ ++.+|..|+||||+|+..|+.++++....
T Consensus 154 ~~~~~~l~~~~~~~~---~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~~~l 209 (229)
T 2vge_A 154 SGAVYALWDYSAEFG---DELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRNYF 209 (229)
T ss_dssp GGEEEESSCBCCSST---TBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEGGGE
T ss_pred CCchHHHHHHhhccc---cccCccccccccccccCCCcccHHHHHHHcCCcceeehhhh
Confidence 566666654433322 2445556666 55677888889998888888888866443
No 71
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=1.4e-29 Score=201.31 Aligned_cols=171 Identities=22% Similarity=0.175 Sum_probs=146.2
Q ss_pred CCCchhHHHHHHhhhcCcCCCcccHH----HHHHHHHhCCcccee----cCCCCChHHHHHHHh---CCHHHHHHHHHHh
Q 047844 33 KKNTVLHVNIIASYTQNKEGESVSTK----FVERIIEMCPSLLLQ----VNAKGDAPLHVAARY---GHAAVVEALIEIA 101 (264)
Q Consensus 33 ~g~t~L~~A~~~~~g~~~~~~~~~~~----~~~~ll~~~~~~~~~----~~~~g~t~L~~A~~~---g~~~~v~~Ll~~~ 101 (264)
.|.||||.|+ ..|+ .+ ++++|++.+.+ ++. .|..|+||||+|+.. |+.+++++|++.|
T Consensus 1 ~G~t~L~~A~--~~g~--------~~~v~~ll~~l~~~g~~-i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g 69 (256)
T 2etb_A 1 FDRDRLFSVV--SRGV--------PEELTGLLEYLRWNSKY-LTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQID 69 (256)
T ss_dssp CCHHHHHHHH--HHTC--------GGGGTTHHHHHHHHTCC-TTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHH
T ss_pred CCccHHHHHH--HcCC--------HHHHHHHHHHHHHcCCC-cccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcC
Confidence 4789999999 9999 76 67788888988 666 899999999999999 9999999999999
Q ss_pred hhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCC-------------CCCHHHH
Q 047844 102 KQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANGS-------------GETPLYL 168 (264)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~-------------g~t~Lh~ 168 (264)
++....... +......++..|.||||+|+..|+.+++++|++.|+++ +..+.. |+||||+
T Consensus 70 ~~~~~~~~~------~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~g~tpL~~ 142 (256)
T 2etb_A 70 KDSGNPKPL------VNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADV-HLRACGRFFQKHQGTCFYFGELPLSL 142 (256)
T ss_dssp HHTTCSSCG------GGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCSGGGSCCSSSCCCSCSSHHHH
T ss_pred Ccccchhhh------cccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcccccccccccccccccCCCCHHHH
Confidence 886532100 00001124567999999999999999999999999996 666665 9999999
Q ss_pred HHHhChHHHHHHHHh---hCCCCCcCCCCCccHHhHHHh--cCChH-------HHHHHHhhhCCC
Q 047844 169 AAARAHKEISAEILQ---KCPSPAHEGPNGKTALHAAVC--SRSCA-------ASRCHKLHRSSR 221 (264)
Q Consensus 169 A~~~~~~~~~~~Ll~---~ga~~~~~~~~g~tpl~~A~~--~~~~~-------~~~~l~~~~~~~ 221 (264)
|+..|+.+++++|++ .|++++.+|..|+||||+|+. .++.+ ++++|+.+++..
T Consensus 143 A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~ 207 (256)
T 2etb_A 143 AACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARL 207 (256)
T ss_dssp HHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCc
Confidence 999999999999999 999999999999999999998 78888 999999987643
No 72
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=4.7e-30 Score=205.95 Aligned_cols=171 Identities=23% Similarity=0.238 Sum_probs=139.2
Q ss_pred CcHHHHHHHc---CCchHHhhhhhhc----------cc-ccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhC
Q 047844 2 NSDLYEAAAK---GEIEPFNQLAIDR----------QL-GSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMC 67 (264)
Q Consensus 2 ~~~l~~A~~~---g~~~~~~~l~~~~----------~~-~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~ 67 (264)
.||||+|+.. |+.+++++|++.+ +. ....|..|.||||+|+ ..|+ .+++++|++.+
T Consensus 55 ~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~--~~g~--------~~~v~~Ll~~g 124 (273)
T 2pnn_A 55 KTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAI--ERRN--------MTLVTLLVENG 124 (273)
T ss_dssp CCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHH--HTTC--------HHHHHHHHHTT
T ss_pred CCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHH--HcCC--------HHHHHHHHHCC
Confidence 5899999987 9999999999932 11 1114568999999999 9999 99999999999
Q ss_pred CccceecCC--------------CCChHHHHHHHhCCHHHHHHHHH---HhhhcchhhhhhchhhHHHHHhcCCCCCCCC
Q 047844 68 PSLLLQVNA--------------KGDAPLHVAARYGHAAVVEALIE---IAKQESDQEIESGVESTARHMLGMKNDEEDT 130 (264)
Q Consensus 68 ~~~~~~~~~--------------~g~t~L~~A~~~g~~~~v~~Ll~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t 130 (264)
.+ ++..+. .|.||||+|+..|+.+++++|++ .|++++. ++..|.|
T Consensus 125 a~-~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~-----------------~d~~g~t 186 (273)
T 2pnn_A 125 AD-VQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISA-----------------RDSVGNT 186 (273)
T ss_dssp CC-TTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC-----------------CCTTSCC
T ss_pred CC-cCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCcee-----------------eCCCCCc
Confidence 88 677776 79999999999999999999999 8887544 8999999
Q ss_pred hhhHHHhcCC---------HHHHHHHhcCCCCCC------CCCCCCCCCHHHHHHHhChHHHHHHHHhhCC-CCCcCCCC
Q 047844 131 ALHEAVQSGS---------LDVVKILLGADPAFP------YSANGSGETPLYLAAARAHKEISAEILQKCP-SPAHEGPN 194 (264)
Q Consensus 131 ~L~~A~~~~~---------~~~~~~Ll~~g~~~~------~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga-~~~~~~~~ 194 (264)
|||+|+..|+ .+++++|++.|+++. +.+|..|+||||+|+..|+.+++++|+++|+ ++......
T Consensus 187 pLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~~~~~ 266 (273)
T 2pnn_A 187 VLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPECRHAA 266 (273)
T ss_dssp HHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC--------
T ss_pred HHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCchhhhhh
Confidence 9999999988 899999999998863 2589999999999999999999999999998 78777776
Q ss_pred CccHHh
Q 047844 195 GKTALH 200 (264)
Q Consensus 195 g~tpl~ 200 (264)
+.+|-+
T Consensus 267 ~~~~~~ 272 (273)
T 2pnn_A 267 AHHHHH 272 (273)
T ss_dssp ------
T ss_pred hhhccC
Confidence 666543
No 73
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.96 E-value=3.2e-30 Score=203.08 Aligned_cols=176 Identities=15% Similarity=0.062 Sum_probs=101.5
Q ss_pred CcHHHHHHHcCCchHHhhhhhhcccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChH
Q 047844 2 NSDLYEAAAKGEIEPFNQLAIDRQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAP 81 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~ 81 (264)
.||||.|+..|+.+.++.|++.+...+ .+..|.||||.|+ ..|+ .+++++|++.+.+ ++..|..|+||
T Consensus 6 ~t~L~~a~~~~~~~~~~~ll~~g~~~~-~~~~~~t~L~~A~--~~g~--------~~~v~~Ll~~g~~-~~~~d~~g~t~ 73 (239)
T 1ycs_B 6 QVSLPPGKRTNLRKTGSERIAHGMRVK-FNPLPLALLLDSS--LEGE--------FDLVQRIIYEVDD-PSLPNDEGITA 73 (239)
T ss_dssp --------------------------------CHHHHHHHH--HHTC--------HHHHHHHTSTTSS-CCCCCTTSCCH
T ss_pred cccCchhhhhhhHHHHHHHhccCCCcc-cCchhhHHHHHHH--HcCC--------HHHHHHHHHcCCC-CCCcCCCCCCH
Confidence 367777777777777777777322211 2456677777777 7777 7777777777775 66777777777
Q ss_pred HHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCC
Q 047844 82 LHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANGS 161 (264)
Q Consensus 82 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~ 161 (264)
||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+.+++++|+++|+++ +..+..
T Consensus 74 L~~A~~~g~~~~v~~Ll~~ga~~~~-----------------~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~ 135 (239)
T 1ycs_B 74 LHNAVCAGHTEIVKFLVQFGVNVNA-----------------ADSDGWTPLHCAASCNNVQVCKFLVESGAAV-FAMTYS 135 (239)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCCTTC-----------------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCSS
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCc-----------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-ceecCC
Confidence 7777777777777777777766433 6777777777777777777777777777775 455555
Q ss_pred CC-CHHHHH--HHhChHHHHHHHHhhCCCCCcC---------CCCCccHHhHHHhcCC
Q 047844 162 GE-TPLYLA--AARAHKEISAEILQKCPSPAHE---------GPNGKTALHAAVCSRS 207 (264)
Q Consensus 162 g~-t~Lh~A--~~~~~~~~~~~Ll~~ga~~~~~---------~~~g~tpl~~A~~~~~ 207 (264)
|. ||||+| +..|+.+++++|+++|++++.. +..+.++.+++...|.
T Consensus 136 ~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 136 DMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp SCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred CCcchHHHHHHhhhccHHHHHHHHHhhhcccccccceEEEEeccCCCCCCcccccCCC
Confidence 44 777777 6667777777777777666554 4445666666666554
No 74
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=1.9e-28 Score=196.92 Aligned_cols=157 Identities=18% Similarity=0.226 Sum_probs=141.9
Q ss_pred CcHHHHHHHcCCchHHhhhhhhcc-cccccCCCCCchhHHHHHH---hhhcCcCCCcccHHHHHHHHHhCCccceecCCC
Q 047844 2 NSDLYEAAAKGEIEPFNQLAIDRQ-LGSLVTHKKNTVLHVNIIA---SYTQNKEGESVSTKFVERIIEMCPSLLLQVNAK 77 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~~~-~~~~~~~~g~t~L~~A~~~---~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~ 77 (264)
+||||+|+..|+.+++++|++.+. ..+..+..|.||||.|++. ..++ .+++++|++.+.. .+..+..
T Consensus 112 ~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~--------~~~v~~Ll~~g~~-~~~~~~~ 182 (276)
T 4hbd_A 112 NTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDD--------IETVLQLFRLGNI-NAKASQA 182 (276)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHH--------HHHHHHHHHHSCT-TCCCTTT
T ss_pred CCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhh--------HHHHHHHHHcCCC-ccccCCC
Confidence 589999999999999999999443 5556899999999999922 2367 9999999999977 6788899
Q ss_pred CChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhc-CCCCCCC
Q 047844 78 GDAPLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLG-ADPAFPY 156 (264)
Q Consensus 78 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~ 156 (264)
|+||||+|+..|+.+++++|++.|++++. +|..|.||||+|+..|+.+++++|++ .|+++ +
T Consensus 183 g~tpLh~A~~~g~~~~v~~Ll~~gad~n~-----------------~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~-~ 244 (276)
T 4hbd_A 183 GQTALMLAVSHGRVDVVKALLACEADVNV-----------------QDDDGSTALMCACEHGHKEIAGLLLAVPSCDI-S 244 (276)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTC-----------------CCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCT-T
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCCCCC-----------------CCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCC-c
Confidence 99999999999999999999999998554 89999999999999999999999999 89995 7
Q ss_pred CCCCCCCCHHHHHHHhChHHHHHHHHhhC
Q 047844 157 SANGSGETPLYLAAARAHKEISAEILQKC 185 (264)
Q Consensus 157 ~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g 185 (264)
.+|..|+||||+|+..|+.+++++|++++
T Consensus 245 ~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 245 LTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 89999999999999999999999999875
No 75
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.96 E-value=1.9e-29 Score=198.61 Aligned_cols=161 Identities=20% Similarity=0.090 Sum_probs=118.4
Q ss_pred CCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChHHHHHHHhCCHHHHHHHHHHhhhcchhhhh
Q 047844 31 THKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAPLHVAARYGHAAVVEALIEIAKQESDQEIE 110 (264)
Q Consensus 31 ~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~ 110 (264)
+..|.||||.|+ ..|+ .+.++.|++.+.+ ++. +..|.||||.|+..|+.+++++|++.|++++.
T Consensus 2 ~~~g~t~L~~a~--~~~~--------~~~~~~ll~~g~~-~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---- 65 (239)
T 1ycs_B 2 EITGQVSLPPGK--RTNL--------RKTGSERIAHGMR-VKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSL---- 65 (239)
T ss_dssp -----------------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCC----
T ss_pred CccccccCchhh--hhhh--------HHHHHHHhccCCC-ccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCC----
Confidence 456899999999 9999 9999999999988 443 47789999999999999999999999987544
Q ss_pred hchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHhhCCCCCc
Q 047844 111 SGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANGSGETPLYLAAARAHKEISAEILQKCPSPAH 190 (264)
Q Consensus 111 ~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~ 190 (264)
++..|.||||+|+..|+.+++++|++.|+++ +..|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 66 -------------~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~ 131 (239)
T 1ycs_B 66 -------------PNDEGITALHNAVCAGHTEIVKFLVQFGVNV-NAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFA 131 (239)
T ss_dssp -------------CCTTSCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred -------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcce
Confidence 8999999999999999999999999999996 78999999999999999999999999999999999
Q ss_pred CCCCCc-cHHhHH--HhcCChHHHHHHHhhhCCC
Q 047844 191 EGPNGK-TALHAA--VCSRSCAASRCHKLHRSSR 221 (264)
Q Consensus 191 ~~~~g~-tpl~~A--~~~~~~~~~~~l~~~~~~~ 221 (264)
++..|. ||+|+| +..|+.+++++|+..++..
T Consensus 132 ~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~ 165 (239)
T 1ycs_B 132 MTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKM 165 (239)
T ss_dssp CCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHT
T ss_pred ecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcc
Confidence 998887 999999 8889999999999887653
No 76
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=5e-29 Score=198.50 Aligned_cols=159 Identities=21% Similarity=0.205 Sum_probs=139.1
Q ss_pred CcHHHHHH---HcCCchHHhhhhhhcc-----------cccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhC
Q 047844 2 NSDLYEAA---AKGEIEPFNQLAIDRQ-----------LGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMC 67 (264)
Q Consensus 2 ~~~l~~A~---~~g~~~~~~~l~~~~~-----------~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~ 67 (264)
.||||+|+ ..|+.+++++|++.+. .....|..|.||||+|+ ..|+ .+++++|++.+
T Consensus 47 ~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~--~~g~--------~~~v~~Ll~~g 116 (260)
T 3jxi_A 47 KTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAI--ERRC--------KHYVELLVEKG 116 (260)
T ss_dssp CCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHH--HTTC--------HHHHHHHHHTT
T ss_pred CcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHH--HcCC--------HHHHHHHHhCC
Confidence 48999999 6799999999998321 12224558999999999 9999 99999999999
Q ss_pred CccceecC--------------CCCChHHHHHHHhCCHHHHHHHHH---HhhhcchhhhhhchhhHHHHHhcCCCCCCCC
Q 047844 68 PSLLLQVN--------------AKGDAPLHVAARYGHAAVVEALIE---IAKQESDQEIESGVESTARHMLGMKNDEEDT 130 (264)
Q Consensus 68 ~~~~~~~~--------------~~g~t~L~~A~~~g~~~~v~~Ll~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t 130 (264)
.+ ++..+ ..|+||||+|+..|+.+++++|++ .|++++ .+|..|.|
T Consensus 117 a~-~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~-----------------~~d~~g~T 178 (260)
T 3jxi_A 117 AD-VHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLR-----------------RQDSRGNT 178 (260)
T ss_dssp CC-TTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTT-----------------CCCTTSCC
T ss_pred CC-cCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCc-----------------ccCCCCCc
Confidence 88 67777 689999999999999999999999 788754 48999999
Q ss_pred hhhHHHhcCC---------HHHHHHHhcCCCCCC------CCCCCCCCCHHHHHHHhChHHHHHHHHhhCCCC
Q 047844 131 ALHEAVQSGS---------LDVVKILLGADPAFP------YSANGSGETPLYLAAARAHKEISAEILQKCPSP 188 (264)
Q Consensus 131 ~L~~A~~~~~---------~~~~~~Ll~~g~~~~------~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~ 188 (264)
|||+|+..++ .+++++|++.|+++. +..|..|+||||+|+..|+.+++++|+++|++.
T Consensus 179 pLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 251 (260)
T 3jxi_A 179 VLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIAD 251 (260)
T ss_dssp HHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCc
Confidence 9999999887 799999999998852 468999999999999999999999999998543
No 77
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.96 E-value=2.5e-29 Score=190.14 Aligned_cols=158 Identities=11% Similarity=0.041 Sum_probs=129.7
Q ss_pred cHHHHHHHcCCchHHhhhhh-hcccccccC-CCCCchhHHHHHHhhhcCcCCCcccH----HHHHHHHHhCCccceecCC
Q 047844 3 SDLYEAAAKGEIEPFNQLAI-DRQLGSLVT-HKKNTVLHVNIIASYTQNKEGESVST----KFVERIIEMCPSLLLQVNA 76 (264)
Q Consensus 3 ~~l~~A~~~g~~~~~~~l~~-~~~~~~~~~-~~g~t~L~~A~~~~~g~~~~~~~~~~----~~~~~ll~~~~~~~~~~~~ 76 (264)
++|+.|+..|+++.++.++. +.+. .+ ..|+||||+|+ ..|+ . +++++|++.|++ ++.+|.
T Consensus 8 ~~l~~Aa~~g~~~~~~~l~~~~~~~---~~~~~g~T~Lh~A~--~~~~--------~~~~~~iv~~Ll~~Gad-vn~~d~ 73 (186)
T 3t8k_A 8 RTVSAAAMLGTYEDFLELFEKGYED---KESVLKSNILYDVL--RNNN--------DEARYKISMFLINKGAD-IKSRTK 73 (186)
T ss_dssp SSHHHHHHHSCHHHHHHHHHHSSSC---HHHHHTTTHHHHHT--TCSC--------HHHHHHHHHHHHHTTCC-SSCCCT
T ss_pred cHHHHHHHcCCHHHHHHHHhcCccc---ccccCCCCHHHHHH--HcCC--------cchHHHHHHHHHHCCCC-CCCCCC
Confidence 68999999999999999998 4433 44 77999999999 8886 5 589999999999 889999
Q ss_pred CCChHHHHHHHhCC------HHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCC-ChhhHHHhcC-----CHHHH
Q 047844 77 KGDAPLHVAARYGH------AAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEED-TALHEAVQSG-----SLDVV 144 (264)
Q Consensus 77 ~g~t~L~~A~~~g~------~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~-t~L~~A~~~~-----~~~~~ 144 (264)
.|+||||+|+..|+ .+++++|+++|++++. +|..|. ||||+|+..+ ..+++
T Consensus 74 ~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~-----------------~d~~g~ttpLh~A~~~~~~~~~~~~iv 136 (186)
T 3t8k_A 74 EGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITA-----------------LYKPYKIVVFKNIFNYFVDENEMIPLY 136 (186)
T ss_dssp TCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSS-----------------CBGGGTBCTTGGGGGCCSCHHHHHHHH
T ss_pred CCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCc-----------------cCCCcCchHHHHHHHcCCChhhHHHHH
Confidence 99999999999987 5789999999988554 888888 9999998844 35678
Q ss_pred HHHhc-CCCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHhhCCCCCcCC
Q 047844 145 KILLG-ADPAFPYSANGSGETPLYLAAARAHKEISAEILQKCPSPAHEG 192 (264)
Q Consensus 145 ~~Ll~-~g~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~ 192 (264)
++|++ .|+++ +.+|..|.||||+|+..++.+++++|.++....+.++
T Consensus 137 ~~Ll~~~gad~-~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~~~~ 184 (186)
T 3t8k_A 137 KLIFSQSGLQL-LIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLKE 184 (186)
T ss_dssp HHHHTSTTCCT-TCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHhcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHHHHHHHhccc
Confidence 88888 78885 6788888888888888888888888877765555443
No 78
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.96 E-value=3.2e-28 Score=174.99 Aligned_cols=130 Identities=17% Similarity=0.122 Sum_probs=123.2
Q ss_pred ceecCCCCChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcC
Q 047844 71 LLQVNAKGDAPLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGA 150 (264)
Q Consensus 71 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 150 (264)
++..+..|.||||+|+..|+.+++++|++.|++++. ++..|.||||+|+. |+.+++++|++.
T Consensus 5 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-----------------~~~~g~t~L~~A~~-~~~~~v~~Ll~~ 66 (136)
T 1d9s_A 5 IHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNA-----------------LNRFGRRPIQVMMM-GSAQVAELLLLH 66 (136)
T ss_dssp CSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTC-----------------CCTTCCTTTTTSTT-SCHHHHHHHHHH
T ss_pred ccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCC-----------------cCCCCCCHHHHHHc-CCHHHHHHHHHC
Confidence 678899999999999999999999999999887544 88999999999999 999999999999
Q ss_pred CCCCCCCCCCC-CCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCChHHHHHHHhhhC
Q 047844 151 DPAFPYSANGS-GETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRSCAASRCHKLHRS 219 (264)
Q Consensus 151 g~~~~~~~~~~-g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~ 219 (264)
|+++ +..|.. |+||||+|+..++.+++++|+++|++++.+|..|.||||+|+..++.+++++|+.+++
T Consensus 67 g~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Ga 135 (136)
T 1d9s_A 67 GAEP-NCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATG 135 (136)
T ss_dssp TCCS-SCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHC
T ss_pred CCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 9996 788888 9999999999999999999999999999999999999999999999999999998875
No 79
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.95 E-value=1.6e-28 Score=185.80 Aligned_cols=155 Identities=12% Similarity=-0.019 Sum_probs=138.5
Q ss_pred CCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChHHHHHHHhCCH----HHHHHHHHHhhhcchhhh
Q 047844 34 KNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAPLHVAARYGHA----AVVEALIEIAKQESDQEI 109 (264)
Q Consensus 34 g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~----~~v~~Ll~~~~~~~~~~~ 109 (264)
++++|+.|+ ..|+ .+.++.++..+.+.. .+..|+||||+|+..|+. +++++|++.|++++.
T Consensus 6 ~~~~l~~Aa--~~g~--------~~~~~~l~~~~~~~~--~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~--- 70 (186)
T 3t8k_A 6 EYRTVSAAA--MLGT--------YEDFLELFEKGYEDK--ESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKS--- 70 (186)
T ss_dssp HCSSHHHHH--HHSC--------HHHHHHHHHHSSSCH--HHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSC---
T ss_pred cccHHHHHH--HcCC--------HHHHHHHHhcCcccc--cccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCC---
Confidence 568999999 9999 999999999875532 237799999999999975 599999999999655
Q ss_pred hhchhhHHHHHhcCCCCCCCChhhHHHhcCC------HHHHHHHhcCCCCCCCCCCCCCC-CHHHHHHH-----hChHHH
Q 047844 110 ESGVESTARHMLGMKNDEEDTALHEAVQSGS------LDVVKILLGADPAFPYSANGSGE-TPLYLAAA-----RAHKEI 177 (264)
Q Consensus 110 ~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~------~~~~~~Ll~~g~~~~~~~~~~g~-t~Lh~A~~-----~~~~~~ 177 (264)
++..|.||||+|+..|+ .+++++|+++|+++ +.+|..|+ ||||+|+. .+..++
T Consensus 71 --------------~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadi-n~~d~~g~ttpLh~A~~~~~~~~~~~~i 135 (186)
T 3t8k_A 71 --------------RTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADI-TALYKPYKIVVFKNIFNYFVDENEMIPL 135 (186)
T ss_dssp --------------CCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCS-SSCBGGGTBCTTGGGGGCCSCHHHHHHH
T ss_pred --------------CCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCC-CccCCCcCchHHHHHHHcCCChhhHHHH
Confidence 89999999999999987 68899999999996 78999999 99999998 445679
Q ss_pred HHHHHh-hCCCCCcCCCCCccHHhHHHhcCChHHHHHHHhhh
Q 047844 178 SAEILQ-KCPSPAHEGPNGKTALHAAVCSRSCAASRCHKLHR 218 (264)
Q Consensus 178 ~~~Ll~-~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~ 218 (264)
+++|++ +|++++.+|..|+||||+|+..++.+++++|..+.
T Consensus 136 v~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~ 177 (186)
T 3t8k_A 136 YKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYI 177 (186)
T ss_dssp HHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHH
Confidence 999999 99999999999999999999999999999998764
No 80
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.95 E-value=1.2e-28 Score=181.44 Aligned_cols=143 Identities=18% Similarity=0.213 Sum_probs=105.2
Q ss_pred cCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChHHHHHHHhCCHHHHHHHHHHhhhcchhhh
Q 047844 30 VTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAPLHVAARYGHAAVVEALIEIAKQESDQEI 109 (264)
Q Consensus 30 ~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~ 109 (264)
.+..|.||||.|+ ..|+ .+++++|++.+.+ ++..+..|+||||+|+ .|+.+++++|++.|++++.
T Consensus 8 ~~~~~~t~L~~A~--~~g~--------~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~--- 72 (156)
T 1bi7_B 8 SMEPSADWLATAA--ARGR--------VEEVRALLEAGAN-PNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNC--- 72 (156)
T ss_dssp --CCSTTHHHHHH--HHTC--------HHHHHHHHTTTCC-TTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCC---
T ss_pred CCccchHHHHHHH--HcCC--------HHHHHHHHHcCCC-CCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCC---
Confidence 5677888888888 8888 8888888888877 7778888888888885 7888888888888877544
Q ss_pred hhchhhHHHHHhcCCCCCCCC-hhhHHHhcCCHHHHHHHhcCCCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHhhCCCC
Q 047844 110 ESGVESTARHMLGMKNDEEDT-ALHEAVQSGSLDVVKILLGADPAFPYSANGSGETPLYLAAARAHKEISAEILQKCPSP 188 (264)
Q Consensus 110 ~~~~~~~~~~~l~~~~~~g~t-~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~ 188 (264)
++..|.| |||+|+..|+.+++++|++.|+++ +.+|..|+||||+|+..++.+++++|+++|+++
T Consensus 73 --------------~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~ 137 (156)
T 1bi7_B 73 --------------ADPATLTRPVHDAAREGFLDTLVVLHRAGARL-DVRDAWGRLPVDLAEELGHRDVARYLRAAAGGT 137 (156)
T ss_dssp --------------CCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHSSCC---
T ss_pred --------------cCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCC
Confidence 7888888 888888888888888888888885 678888888888888888888888888888888
Q ss_pred CcCCCCCccHHhHH
Q 047844 189 AHEGPNGKTALHAA 202 (264)
Q Consensus 189 ~~~~~~g~tpl~~A 202 (264)
+.++..|.||.+.+
T Consensus 138 ~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 138 RGSNHARIDAAEGP 151 (156)
T ss_dssp --------------
T ss_pred CccCcCcCcccccC
Confidence 88888888877643
No 81
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.95 E-value=6.5e-29 Score=194.25 Aligned_cols=161 Identities=14% Similarity=0.069 Sum_probs=139.7
Q ss_pred hhhhh---hcccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChHHHHHHHhCCHHHH
Q 047844 18 NQLAI---DRQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAPLHVAARYGHAAVV 94 (264)
Q Consensus 18 ~~l~~---~~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v 94 (264)
+.|++ +++.....+..+.||||.|+ ..|+ .+++++|++.+.+ ++..|..|+||||+|+..|+.+++
T Consensus 2 ~~ll~~~~~~~~~~~~~~~~~t~L~~A~--~~g~--------~~~v~~Ll~~g~~-~~~~d~~g~tpLh~A~~~g~~~~v 70 (229)
T 2vge_A 2 RSVLRKAGSPRKARRARLNPLVLLLDAA--LTGE--------LEVVQQAVKEMND-PSQPNEEGITALHNAICGANYSIV 70 (229)
T ss_dssp --------CCCCCCCTTSCHHHHHHHHH--HHTC--------HHHHHHHHHHSSC-TTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred eehhccCCCCccccccccchhHHHHHHH--HcCC--------HHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHcCCHHHH
Confidence 45555 34444446677889999999 9999 9999999999998 788999999999999999999999
Q ss_pred HHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCC-CCCCCCHHHHH--HH
Q 047844 95 EALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSA-NGSGETPLYLA--AA 171 (264)
Q Consensus 95 ~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~-~~~g~t~Lh~A--~~ 171 (264)
++|++.|++++. ++..|.||||+|+..|+.+++++|++.|+++ +.. +..|+||||+| +.
T Consensus 71 ~~Ll~~ga~~n~-----------------~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~g~tpL~~A~a~~ 132 (229)
T 2vge_A 71 DFLITAGANVNS-----------------PDSHGWTPLHCAASCNDTVICMALVQHGAAI-FATTLSDGATAFEKCDPYR 132 (229)
T ss_dssp HHHHHTTCCTTC-----------------CCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCSSTTCCTGGGCCTTS
T ss_pred HHHHHCCCCCCC-----------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-ccccCCCCCCHHHHHHHHh
Confidence 999999988544 8899999999999999999999999999997 455 47999999999 99
Q ss_pred hChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCC
Q 047844 172 RAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRS 207 (264)
Q Consensus 172 ~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~ 207 (264)
.++.+++++|++.|++++.++..|.+|++.++..+.
T Consensus 133 ~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~ 168 (229)
T 2vge_A 133 EGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFG 168 (229)
T ss_dssp TTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSST
T ss_pred cChHHHHHHHHHcCCCcccccCCchHHHHHHhhccc
Confidence 999999999999999999999999999996655543
No 82
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.95 E-value=7.9e-28 Score=172.94 Aligned_cols=129 Identities=20% Similarity=0.281 Sum_probs=121.7
Q ss_pred ccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChHHHHHHHhCCHHHHHHHHHHhhhcchhh
Q 047844 29 LVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAPLHVAARYGHAAVVEALIEIAKQESDQE 108 (264)
Q Consensus 29 ~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~ 108 (264)
..+..|.||||.|+ ..|+ .+++++|++.+.+ ++..+..|+||||+|+. |+.+++++|++.|++++.
T Consensus 7 ~~~~~g~t~L~~A~--~~~~--------~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~-- 72 (136)
T 1d9s_A 7 MLGGSSDAGLATAA--ARGQ--------VETVRQLLEAGAD-PNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNC-- 72 (136)
T ss_dssp CCCCCCSCHHHHHH--HTTC--------HHHHHHHHHTTCC-TTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSC--
T ss_pred CCCCCCccHHHHHH--HcCC--------HHHHHHHHHcCCC-cCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCC--
Confidence 37889999999999 9999 9999999999988 78899999999999999 999999999999988654
Q ss_pred hhhchhhHHHHHhcCCCCC-CCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHhhCCC
Q 047844 109 IESGVESTARHMLGMKNDE-EDTALHEAVQSGSLDVVKILLGADPAFPYSANGSGETPLYLAAARAHKEISAEILQKCPS 187 (264)
Q Consensus 109 ~~~~~~~~~~~~l~~~~~~-g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~ 187 (264)
++.. |.||||+|+..|+.+++++|++.|+++ +.+|..|+||||+|+..++.+++++|+++|+|
T Consensus 73 ---------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 73 ---------------ADPATLTRPVHDAAREGFLDTLVVLHRAGARL-DVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp ---------------CBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCC-CCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred ---------------cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 8888 999999999999999999999999996 78899999999999999999999999999875
No 83
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.95 E-value=4e-28 Score=199.71 Aligned_cols=173 Identities=12% Similarity=0.076 Sum_probs=127.4
Q ss_pred CCchHHhhhhhhcccccc-----------------cCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCcccee-
Q 047844 12 GEIEPFNQLAIDRQLGSL-----------------VTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQ- 73 (264)
Q Consensus 12 g~~~~~~~l~~~~~~~~~-----------------~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~- 73 (264)
|+.++++.|++.+-.... ......+.+|.|+ ..+. .++++.|++.+.+ ++.
T Consensus 58 g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~--~~~~--------~~~~~~l~~~g~d-vn~~ 126 (327)
T 1sw6_A 58 EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSF--DSLL--------QEVNDAFPNTQLN-LNIP 126 (327)
T ss_dssp HHHHHHHHHHHHHHC-------------------------------CH--HHHH--------HHHHHHCTTSCCC-SCSC
T ss_pred chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHH--HhhH--------HHHHHHHHhcCCC-cccc
Confidence 889999999983211000 0011123347777 7777 8899999999988 777
Q ss_pred cCCCCChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCC---HHHHHHHhcC
Q 047844 74 VNAKGDAPLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGS---LDVVKILLGA 150 (264)
Q Consensus 74 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~---~~~~~~Ll~~ 150 (264)
.|..|+||||+|+..|+.+++++|+++|++++. ++..|.||||+|+..|+ .++++.|++.
T Consensus 127 ~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~-----------------~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~ 189 (327)
T 1sw6_A 127 VDEHGNTPLHWLTSIANLELVKHLVKHGSNRLY-----------------GDNMGESCLVKAVKSVNNYDSGTFEALLDY 189 (327)
T ss_dssp CSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTB-----------------CCTTCCCHHHHHHHSSHHHHTTCHHHHHHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC-----------------cCCCCCCHHHHHHHhcccccHHHHHHHHHh
Confidence 899999999999999999999999999998654 89999999999999998 6788888877
Q ss_pred CCCCCCCCCCCCCCHHHHHHH----hChHHHHHHHHhh--------------------CCCCCcCCCCCccHHhHHHhcC
Q 047844 151 DPAFPYSANGSGETPLYLAAA----RAHKEISAEILQK--------------------CPSPAHEGPNGKTALHAAVCSR 206 (264)
Q Consensus 151 g~~~~~~~~~~g~t~Lh~A~~----~~~~~~~~~Ll~~--------------------ga~~~~~~~~g~tpl~~A~~~~ 206 (264)
+....+..|..|+||||+|+. .|+.+++++|++. |++++.++..|.||||.|+.
T Consensus 190 ~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~-- 267 (327)
T 1sw6_A 190 LYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD-- 267 (327)
T ss_dssp HGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS--
T ss_pred hhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH--
Confidence 633247889999999999999 8999999999987 89999999999999999985
Q ss_pred ChHHHHHHHhhh
Q 047844 207 SCAASRCHKLHR 218 (264)
Q Consensus 207 ~~~~~~~l~~~~ 218 (264)
+++|+.+.
T Consensus 268 ----~~~Ll~~~ 275 (327)
T 1sw6_A 268 ----LKWIIANM 275 (327)
T ss_dssp ----HHHHHHHT
T ss_pred ----HHHHHHhC
Confidence 77777663
No 84
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.94 E-value=7.7e-27 Score=167.75 Aligned_cols=127 Identities=24% Similarity=0.247 Sum_probs=117.4
Q ss_pred cCCCCChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCC
Q 047844 74 VNAKGDAPLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPA 153 (264)
Q Consensus 74 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~ 153 (264)
....+.||||+|+..|+.+++++|++.|++++. ++..|.||||+|+..|+.+++++|++.|++
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~-----------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 72 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADVNA-----------------KDEYGLTPLYLATAHGHLEIVEVLLKNGAD 72 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTC-----------------CCTTSCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCCCC-----------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 355678999999999999999999999987544 889999999999999999999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCChHHHHHHHhhh
Q 047844 154 FPYSANGSGETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRSCAASRCHKLHR 218 (264)
Q Consensus 154 ~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~ 218 (264)
+ +..|..|+||||+|+..++.+++++|+++|++++.+|..|.||+++|+..++.+++++|+.++
T Consensus 73 ~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 73 V-NAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp T-TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred C-CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 6 788999999999999999999999999999999999999999999999999999999998753
No 85
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.94 E-value=3.5e-26 Score=161.69 Aligned_cols=125 Identities=34% Similarity=0.468 Sum_probs=118.3
Q ss_pred CCChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCC
Q 047844 77 KGDAPLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPY 156 (264)
Q Consensus 77 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~ 156 (264)
+|+||||+|+..|+.+++++|++.|.+++. .+..|.||||+|+..|+.+++++|++.|+++ +
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~-----------------~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~ 62 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNA-----------------KDKNGRTPLHLAARNGHLEVVKLLLEAGADV-N 62 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTC-----------------CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-T
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCC-----------------cCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC-c
Confidence 589999999999999999999999887544 8889999999999999999999999999995 7
Q ss_pred CCCCCCCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCChHHHHHHHhhhC
Q 047844 157 SANGSGETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRSCAASRCHKLHRS 219 (264)
Q Consensus 157 ~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~ 219 (264)
..|..|.||||+|+..++.+++++|+++|++++.++..|.||+++|+..++.+++++|+.+++
T Consensus 63 ~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 63 AKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125 (126)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred ccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 889999999999999999999999999999999999999999999999999999999998874
No 86
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.94 E-value=3.4e-26 Score=161.75 Aligned_cols=126 Identities=33% Similarity=0.470 Sum_probs=118.8
Q ss_pred CCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhc
Q 047844 33 KKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAPLHVAARYGHAAVVEALIEIAKQESDQEIESG 112 (264)
Q Consensus 33 ~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~ 112 (264)
+|.||||.|+ ..|+ .+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|++.|++++.
T Consensus 1 ~g~t~L~~A~--~~~~--------~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------ 63 (126)
T 1n0r_A 1 NGRTPLHLAA--RNGH--------LEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA------ 63 (126)
T ss_dssp CCCCHHHHHH--HHTC--------HHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC------
T ss_pred CCccHHHHHH--HcCc--------HHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcc------
Confidence 5899999999 9999 9999999999988 788899999999999999999999999999887544
Q ss_pred hhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHhhCCC
Q 047844 113 VESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANGSGETPLYLAAARAHKEISAEILQKCPS 187 (264)
Q Consensus 113 ~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~ 187 (264)
++..|.||||+|+..|+.+++++|++.|+++ +.+|..|.||||+|+..++.+++++|+++|++
T Consensus 64 -----------~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 64 -----------KDKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp -----------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred -----------cCCCCCcHHHHHHHcChHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 8889999999999999999999999999995 78899999999999999999999999999985
No 87
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.94 E-value=2.3e-26 Score=165.26 Aligned_cols=127 Identities=17% Similarity=0.197 Sum_probs=117.3
Q ss_pred cCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChHHHHHHHhCCHHHHHHHHHHhhhcchhhh
Q 047844 30 VTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAPLHVAARYGHAAVVEALIEIAKQESDQEI 109 (264)
Q Consensus 30 ~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~ 109 (264)
....+.||||.|+ ..|+ .+++++|++.+.+ ++..|..|+||||+|+..|+.+++++|++.|++++.
T Consensus 10 ~~~~~~t~l~~A~--~~g~--------~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--- 75 (136)
T 2jab_A 10 HGSDLGKKLLEAA--RAGQ--------DDEVRILMANGAD-VNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNA--- 75 (136)
T ss_dssp --CHHHHHHHHHH--HHTC--------HHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC---
T ss_pred ccccccHHHHHHH--HhCC--------HHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc---
Confidence 4566889999999 9999 9999999999988 788999999999999999999999999999888544
Q ss_pred hhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHhhC
Q 047844 110 ESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANGSGETPLYLAAARAHKEISAEILQKC 185 (264)
Q Consensus 110 ~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g 185 (264)
++..|.||||+|+..|+.+++++|++.|+++ +..|..|.||||+|+..++.+++++|+++|
T Consensus 76 --------------~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 76 --------------VDAIGFTPLHLAAFIGHLEIAEVLLKHGADV-NAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp --------------CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred --------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-cCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 8899999999999999999999999999996 788999999999999999999999999876
No 88
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.94 E-value=2e-26 Score=169.55 Aligned_cols=132 Identities=17% Similarity=0.085 Sum_probs=117.8
Q ss_pred ceecCCCCChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcC
Q 047844 71 LLQVNAKGDAPLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGA 150 (264)
Q Consensus 71 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 150 (264)
....+..|.||||+|+..|+.+++++|++.|++++. ++..|.||||+|+ .|+.+++++|++.
T Consensus 5 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-----------------~~~~g~t~L~~A~-~~~~~~v~~Ll~~ 66 (156)
T 1bi7_B 5 AGSSMEPSADWLATAAARGRVEEVRALLEAGANPNA-----------------PNSYGRRPIQVMM-MGSARVAELLLLH 66 (156)
T ss_dssp -----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTC-----------------CCSSSCCTTTSSC-TTCHHHHHHHHTT
T ss_pred ccCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCC-----------------CCCCCCCHHHHHH-cCCHHHHHHHHHc
Confidence 345678899999999999999999999999887544 8899999999985 8999999999999
Q ss_pred CCCCCCCCCCCCCC-HHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCChHHHHHHHhhhCCC
Q 047844 151 DPAFPYSANGSGET-PLYLAAARAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRSCAASRCHKLHRSSR 221 (264)
Q Consensus 151 g~~~~~~~~~~g~t-~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~~ 221 (264)
|+++ +..|..|+| |||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|+.+++..
T Consensus 67 g~~~-~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~ 137 (156)
T 1bi7_B 67 GAEP-NCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGT 137 (156)
T ss_dssp TCCC-CCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC---
T ss_pred CCCC-CCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCC
Confidence 9996 788999999 999999999999999999999999999999999999999999999999999887653
No 89
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.94 E-value=2.8e-27 Score=178.69 Aligned_cols=163 Identities=16% Similarity=0.099 Sum_probs=138.7
Q ss_pred HHHcCCchHHhhhhh--hccc---------ccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCC
Q 047844 8 AAAKGEIEPFNQLAI--DRQL---------GSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNA 76 (264)
Q Consensus 8 A~~~g~~~~~~~l~~--~~~~---------~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~ 76 (264)
|++.|..+.+++|++ .... ....+..|.||||.|+ ..|+ .+++++|++ +.+ ++..|.
T Consensus 7 aa~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~--~~g~--------~~~v~~Ll~-~~~-~~~~d~ 74 (183)
T 3deo_A 7 GSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAA--RKAD--------EQALSQLLE-DRD-VDAVDE 74 (183)
T ss_dssp EEEEETTTEEEEEEEETTCCCCEEEEGGGSCHHHHHHHHHHHHHHH--HTTC--------HHHHHHHTT-TSC-TTCCCT
T ss_pred HHHhcCCchhHHHHHHhCCCCccccchhcccccCCCCCCCHHHHHH--HcCC--------HHHHHHHHh-cCC-CCCcCC
Confidence 456677778888885 1111 0112557899999999 9999 999999999 766 788999
Q ss_pred CCChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCC-CCCCChhhHHHhcCCHHHHHHHhcCCCCCC
Q 047844 77 KGDAPLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKN-DEEDTALHEAVQSGSLDVVKILLGADPAFP 155 (264)
Q Consensus 77 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~ 155 (264)
.|+||||+|+..|+.+++++|+++|++++. ++ ..|.||||+|+..|+.+++++|+++|+++
T Consensus 75 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-----------------~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~- 136 (183)
T 3deo_A 75 NGRTALLFVAGLGSDKCVRLLAEAGADLDH-----------------RDMRGGLTALHMAAGYVRPEVVEALVELGADI- 136 (183)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-----------------CCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCT-
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-----------------CCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCC-
Confidence 999999999999999999999999988654 66 88999999999999999999999999996
Q ss_pred CCCCCCCCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCChHHHHHHHhh
Q 047844 156 YSANGSGETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRSCAASRCHKLH 217 (264)
Q Consensus 156 ~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~ 217 (264)
+.+|..|+||||+|+..++. ..+.+|+++|+..+..+++++|..+
T Consensus 137 ~~~d~~g~tpl~~A~~~~~~-----------------~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 137 EVEDERGLTALELAREILKT-----------------TPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp TCCCTTSCCHHHHHHHHHHT-----------------CCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCCCCCCCHHHHHHHhccC-----------------cccccHHHHHHHcCHHHHHHHHHHh
Confidence 78999999999999885433 3468999999999999999998654
No 90
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.94 E-value=1.1e-26 Score=167.18 Aligned_cols=128 Identities=23% Similarity=0.233 Sum_probs=116.9
Q ss_pred ecCCCCChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCC
Q 047844 73 QVNAKGDAPLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADP 152 (264)
Q Consensus 73 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~ 152 (264)
.+|..|+||||+|+..|+.+++++|++.|++++. ++..|.||||+|+..|+.+++++|++.|+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-----------------~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~ 67 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNV-----------------KDHAGWTPLHEACNHGHLKVVELLLQHKA 67 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCC-----------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-----------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 5789999999999999999999999999887544 88999999999999999999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCChHHHHHHHhhh
Q 047844 153 AFPYSANGSGETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRSCAASRCHKLHR 218 (264)
Q Consensus 153 ~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~ 218 (264)
++ +..|..|+||||+|+..++.+++++|+++|++++.+|..|.||+++|+..+..++++++....
T Consensus 68 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~ 132 (137)
T 3c5r_A 68 LV-NTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNE 132 (137)
T ss_dssp CT-TCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC----
T ss_pred cc-cCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccccc
Confidence 95 788999999999999999999999999999999999999999999999999888887765543
No 91
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.93 E-value=1.9e-27 Score=187.74 Aligned_cols=161 Identities=16% Similarity=0.080 Sum_probs=135.8
Q ss_pred HHHcCCchHHhhhhhhcccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChHHHHHHH
Q 047844 8 AAAKGEIEPFNQLAIDRQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAPLHVAAR 87 (264)
Q Consensus 8 A~~~g~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~ 87 (264)
++..|+.+.+..+...... .+..|.||||.|+ ..|+ .+++++|++ +.+ ++..|..|+||||+|+.
T Consensus 22 ~~~~g~~~~~~~~~~~~~~---~~~~g~t~L~~A~--~~g~--------~~~v~~Ll~-~~~-~~~~d~~g~t~L~~A~~ 86 (244)
T 3ui2_A 22 EWKDGHSPSWVPSSYIAAD---VVSEYETPWWTAA--RKAD--------EQALSQLLE-DRD-VDAVDENGRTALLFVAG 86 (244)
T ss_dssp EESSCCCCEEEEGGGSCHH---HHHHHHHHHHHHH--TTTC--------HHHHHHTTT-TCC-TTCBCTTSCBHHHHHHH
T ss_pred HHHcCCCcccccccccccc---cccCCCCHHHHHH--HcCC--------HHHHHHHHc-CCC-CCCcCCCCCCHHHHHHH
Confidence 3344555554444432222 3567999999999 9999 999999999 776 78999999999999999
Q ss_pred hCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCC-CCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCCCCCHH
Q 047844 88 YGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKN-DEEDTALHEAVQSGSLDVVKILLGADPAFPYSANGSGETPL 166 (264)
Q Consensus 88 ~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L 166 (264)
.|+.+++++|+++|++++. ++ ..|.||||+|+..|+.+++++|+++|+++ +.+|..|+|||
T Consensus 87 ~g~~~~v~~Ll~~ga~~~~-----------------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~t~l 148 (244)
T 3ui2_A 87 LGSDKCVRLLAEAGADLDH-----------------RDMRGGLTALHMAAGYVRPEVVEALVELGADI-EVEDERGLTAL 148 (244)
T ss_dssp HTCHHHHHHHHHTTCCTTC-----------------CCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHH
T ss_pred CCCHHHHHHHHHcCCCCCc-----------------CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHH
Confidence 9999999999999988654 66 78999999999999999999999999996 78999999999
Q ss_pred HHHHHhChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCChHHHHHHHhhh
Q 047844 167 YLAAARAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRSCAASRCHKLHR 218 (264)
Q Consensus 167 h~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~ 218 (264)
|+|+..+. ...+.+|+++|+..|+.+++++|..+.
T Consensus 149 ~~A~~~~~-----------------~~~~~~~l~~a~~~g~~~iv~~L~~~~ 183 (244)
T 3ui2_A 149 ELAREILK-----------------TTPKGNPMQFGRRIGLEKVINVLEGQV 183 (244)
T ss_dssp HHHHHHHT-----------------TCCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHh-----------------ccCCCCHHHHHHHcChHHHHHHHHHhc
Confidence 99986322 256899999999999999999998763
No 92
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.93 E-value=1.8e-28 Score=204.46 Aligned_cols=184 Identities=16% Similarity=0.141 Sum_probs=144.1
Q ss_pred CcHHHHHHHcCCchHHhhhhhhcc---cccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCcc--ceecCC
Q 047844 2 NSDLYEAAAKGEIEPFNQLAIDRQ---LGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSL--LLQVNA 76 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~~~---~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~--~~~~~~ 76 (264)
+||||+||..|+.+++++|++.+. .....+..|.||||+|+ ..|+ .+++++|++.+++. .+..+.
T Consensus 93 ~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa--~~G~--------~eiv~~Ll~~gad~~~~~i~~~ 162 (376)
T 2aja_A 93 EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAA--ENGH--------LHVLNRLCELAPTEIMAMIQAE 162 (376)
T ss_dssp HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHH--HTTC--------HHHHHHHHHSCTTTHHHHHSHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHH--HcCC--------HHHHHHHHhCCCCccccccCCC
Confidence 389999999999999999998433 11125667889999999 9999 99999999999641 112222
Q ss_pred CCChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHH-hcCCHHHHHHHhcCCCCCC
Q 047844 77 KGDAPLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAV-QSGSLDVVKILLGADPAFP 155 (264)
Q Consensus 77 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~-~~~~~~~~~~Ll~~g~~~~ 155 (264)
+ .||||+|+..|+.+++++|+++|+++.. +..+..|.||||+|+ ..|+.+++++|++.|+
T Consensus 163 ~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~---------------~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga--- 223 (376)
T 2aja_A 163 N-YHAFRLAAENGHLHVLNRLCELAPTEAT---------------AMIQAENYYAFRWAAVGRGHHNVINFLLDCPV--- 223 (376)
T ss_dssp H-HHHHHHHHHTTCHHHHHHHHHSCGGGHH---------------HHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH---
T ss_pred C-CCHHHHHHHCCCHHHHHHHHHcCCccch---------------hccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC---
Confidence 2 8999999999999999999999987532 013445789999999 9999999999998763
Q ss_pred CCCCCCCCCHHHHHHHhChHHHHHHHHhhCCCCCc---------------------------------------------
Q 047844 156 YSANGSGETPLYLAAARAHKEISAEILQKCPSPAH--------------------------------------------- 190 (264)
Q Consensus 156 ~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~--------------------------------------------- 190 (264)
.|.||||+|+..|+.+++++|+++|++++.
T Consensus 224 -----~~~taL~~Aa~~g~~evv~lL~~~ga~~~~~~~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~ 298 (376)
T 2aja_A 224 -----MLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIR 298 (376)
T ss_dssp -----HHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHHTTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHH
T ss_pred -----ccchHHHHHHHCCCHHHHHHHHhcCcccccccHHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHH
Confidence 278999999999999999999887543210
Q ss_pred ----------------CCCCCccHHhHHHhcCChHHHHHHHhhhC
Q 047844 191 ----------------EGPNGKTALHAAVCSRSCAASRCHKLHRS 219 (264)
Q Consensus 191 ----------------~~~~g~tpl~~A~~~~~~~~~~~l~~~~~ 219 (264)
....+.+|+++|+..|+.+++++|+..+.
T Consensus 299 ~Ll~~~~vk~l~~~g~~~n~~~~~L~~A~~~g~~e~v~lLl~~~~ 343 (376)
T 2aja_A 299 FLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIPS 343 (376)
T ss_dssp HHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTTSHH
T ss_pred HHHhChhhhhhhccCCCCCCccHHHHHHHHcCcHHHHHHHHcChH
Confidence 11234578999999999999999987654
No 93
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.93 E-value=6.3e-28 Score=201.13 Aligned_cols=177 Identities=17% Similarity=0.117 Sum_probs=142.4
Q ss_pred HHHHHHH-cCCchHHhhhhhhcccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCcc--ceecCCCCCh
Q 047844 4 DLYEAAA-KGEIEPFNQLAIDRQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSL--LLQVNAKGDA 80 (264)
Q Consensus 4 ~l~~A~~-~g~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~--~~~~~~~g~t 80 (264)
.+++|+. .++.+.++++++. +.++.||||.|+ ..|+ .+++++|++.+... .+..+..|.|
T Consensus 68 ~~~~a~~~~~~~~~~~~l~~~-------g~~~~T~Lh~Aa--~~G~--------~e~v~~Ll~~ga~~~~~~~~~~~~~t 130 (376)
T 2aja_A 68 CLYYAHYNRNAKQLWSDAHKK-------GIKSEVICFVAA--ITGC--------SSALDTLCLLLTSDEIVKVIQAENYQ 130 (376)
T ss_dssp HHHHHHTTTTCTTHHHHHHHH-------TCCHHHHHHHHH--HHCC--------HHHHHHHTTC--CCSSCC--CHHHHH
T ss_pred HHHHHHhcCCCHHHHHHHHHc-------CCCcCCHHHHHH--HcCC--------HHHHHHHHHcCCcHHHHHHhccCCCC
Confidence 4566666 5777888888762 334569999999 9999 99999999998731 1234556889
Q ss_pred HHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCC--C
Q 047844 81 PLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYS--A 158 (264)
Q Consensus 81 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~--~ 158 (264)
|||+|+..|+.+++++|+++|++....+ + .+.+ .||||+|+..|+.+++++|+++|+++ +. .
T Consensus 131 pL~~Aa~~G~~eiv~~Ll~~gad~~~~~------------i--~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~-~~~~~ 194 (376)
T 2aja_A 131 AFRLAAENGHLHVLNRLCELAPTEIMAM------------I--QAEN-YHAFRLAAENGHLHVLNRLCELAPTE-ATAMI 194 (376)
T ss_dssp HHHHHHHTTCHHHHHHHHHSCTTTHHHH------------H--SHHH-HHHHHHHHHTTCHHHHHHHHHSCGGG-HHHHH
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCccccc------------c--CCCC-CCHHHHHHHCCCHHHHHHHHHcCCcc-chhcc
Confidence 9999999999999999999996432110 1 1222 79999999999999999999999985 44 6
Q ss_pred CCCCCCHHHHHH-HhChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCChHHHHHHHhhhCC
Q 047844 159 NGSGETPLYLAA-ARAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRSCAASRCHKLHRSS 220 (264)
Q Consensus 159 ~~~g~t~Lh~A~-~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~ 220 (264)
|..|+||||+|+ ..|+.+++++|++.|++ |.||+++|+.+|+.+++++|+.+++.
T Consensus 195 d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~-------~~taL~~Aa~~g~~evv~lL~~~ga~ 250 (376)
T 2aja_A 195 QAENYYAFRWAAVGRGHHNVINFLLDCPVM-------LAYAEIHEFEYGEKYVNPFIARHVNR 250 (376)
T ss_dssp HHHHHHHHHHHHSTTCCHHHHHHHTTSHHH-------HHHHHHCTTTTTTTTHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHCCCHHHHHHHHhCCCc-------cchHHHHHHHCCCHHHHHHHHhcCcc
Confidence 778999999999 99999999999997742 89999999999999999999988763
No 94
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.92 E-value=2.5e-25 Score=157.02 Aligned_cols=117 Identities=21% Similarity=0.248 Sum_probs=105.3
Q ss_pred CCCCChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCC
Q 047844 75 NAKGDAPLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAF 154 (264)
Q Consensus 75 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~ 154 (264)
+..|.||||+|+..|+.+++++|++.|.+++ .++..|.||||+|+..|+.+++++|++.|+++
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~-----------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 66 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVN-----------------RTLEGGRKPLHYAADCGQLEILEFLLLKGADI 66 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTT-----------------SCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCT
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcC-----------------ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 4678899999999999999999999988754 48899999999999999999999999999995
Q ss_pred CCCCCCCCCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCChH
Q 047844 155 PYSANGSGETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRSCA 209 (264)
Q Consensus 155 ~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~ 209 (264)
+..|..|+||||+|+..++.+++++|+++|++++.+|..|.||+++|...+..+
T Consensus 67 -~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~ 120 (123)
T 3aaa_C 67 -NAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKA 120 (123)
T ss_dssp -TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHHHH
T ss_pred -CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHHHH
Confidence 788999999999999999999999999999999999999999999995544433
No 95
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.92 E-value=1.7e-25 Score=160.85 Aligned_cols=127 Identities=24% Similarity=0.303 Sum_probs=115.6
Q ss_pred cCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChHHHHHHHhCCHHHHHHHHHHhhhcchhhh
Q 047844 30 VTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAPLHVAARYGHAAVVEALIEIAKQESDQEI 109 (264)
Q Consensus 30 ~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~ 109 (264)
.|..|.||||.|+ ..|+ .+++++|++.+.+ ++..|..|+||||+|+..|+.+++++|++.|++++.
T Consensus 6 ~~~~g~t~L~~A~--~~~~--------~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~--- 71 (137)
T 3c5r_A 6 TNHRGETLLHIAS--IKGD--------IPSVEYLLQNGSD-PNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNT--- 71 (137)
T ss_dssp CCTTCCCHHHHHH--HHTC--------HHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC---
T ss_pred cCCCCCCHHHHHH--HcCC--------HHHHHHHHHcCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccC---
Confidence 6899999999999 9999 9999999999988 788999999999999999999999999999887544
Q ss_pred hhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHhhC
Q 047844 110 ESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANGSGETPLYLAAARAHKEISAEILQKC 185 (264)
Q Consensus 110 ~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g 185 (264)
++..|.||||+|+..|+.+++++|++.|+++ +.+|..|.||+|+|+..+..++++++.+.+
T Consensus 72 --------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~ 132 (137)
T 3c5r_A 72 --------------TGYQNDSPLHDAAKNGHVDIVKLLLSYGASR-NAVNIFGLRPVDYTDDESMKSLLLLPEKNE 132 (137)
T ss_dssp --------------CCGGGCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCGGGGCCCHHHHHHHSCC----
T ss_pred --------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHhhccHHHHHhhccccc
Confidence 8889999999999999999999999999996 789999999999999999988888776654
No 96
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.92 E-value=8.6e-25 Score=177.53 Aligned_cols=140 Identities=23% Similarity=0.201 Sum_probs=121.7
Q ss_pred CCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCcccee------cCCCCChHHHHHHHh---CCHHHHHHHHHHhhhc
Q 047844 34 KNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQ------VNAKGDAPLHVAARY---GHAAVVEALIEIAKQE 104 (264)
Q Consensus 34 g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~------~~~~g~t~L~~A~~~---g~~~~v~~Ll~~~~~~ 104 (264)
+.++|+.|+ ..|+ .+.++.|++.+.+ ++. .+..|+||||+|+.. |+.+++++|+++|+++
T Consensus 151 ~~~~L~~A~--~~g~--------~~~v~~ll~~g~d-~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv 219 (301)
T 2b0o_E 151 EPQRLWTAI--CNRD--------LLSVLEAFANGQD-FGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL 219 (301)
T ss_dssp CHHHHHHHH--HTTC--------HHHHHHHHHTTCC-TTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCT
T ss_pred hHHHHhhhh--hccC--------HHHHHHHHhcCCc-ccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCC
Confidence 346799999 9999 9999999999988 555 688999999999997 8999999999999885
Q ss_pred chhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHhh
Q 047844 105 SDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANGSGETPLYLAAARAHKEISAEILQK 184 (264)
Q Consensus 105 ~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ 184 (264)
+. +|..|.||||+|+..|+.+++++|++.|+++ +.+|..|.||||+|+..++.+++++|+++
T Consensus 220 n~-----------------~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~-~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ 281 (301)
T 2b0o_E 220 DA-----------------KAADGNTALHYAALYNQPDCLKLLLKGRALV-GTVNEAGETALDIARKKHHKECEELLEQA 281 (301)
T ss_dssp TC-----------------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCC-SCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred CC-----------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHh
Confidence 44 8999999999999999999999999999996 78999999999999999999999999999
Q ss_pred CCCCCcCCCCCccHHhHHHhcCCh
Q 047844 185 CPSPAHEGPNGKTALHAAVCSRSC 208 (264)
Q Consensus 185 ga~~~~~~~~g~tpl~~A~~~~~~ 208 (264)
|++ .|.||||+|+.+|+.
T Consensus 282 ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 282 QAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHH------TTSSCCC--------
T ss_pred cCC------CCCChhHHHHhcCCc
Confidence 986 578999999988763
No 97
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.92 E-value=3.7e-25 Score=172.08 Aligned_cols=132 Identities=22% Similarity=0.208 Sum_probs=114.1
Q ss_pred cCCCCChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcC-CC
Q 047844 74 VNAKGDAPLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGA-DP 152 (264)
Q Consensus 74 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~ 152 (264)
.+..|.||||+|+..|+.+++++|++.|++++ .++..|.||||+|+..|+.+++++|++. |+
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-----------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~ 131 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGVN-----------------GLDKAGSTALYWACHGGHKDIVEMLFTQPNI 131 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCCTT-----------------CCCTTSCCHHHHHHHTTCHHHHHHHTTSTTC
T ss_pred cccccccccccccccCcHHHHHHHHhCCCCcc-----------------ccCCCCCCHHHHHHHcCCHHHHHHHHcCCCC
Confidence 45678999999999999999999999988754 4889999999999999999999999998 88
Q ss_pred CCCCCCCCCCCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCChHHHHHHHhhhCCCCC
Q 047844 153 AFPYSANGSGETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRSCAASRCHKLHRSSRFL 223 (264)
Q Consensus 153 ~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~~~~ 223 (264)
++ +..|..|+||||+|+..|+.+++++|+++|++++.+|..|.||+++|+..++.++++.++..++....
T Consensus 132 ~~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~ 201 (222)
T 3ehr_A 132 EL-NQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTL 201 (222)
T ss_dssp CC-CCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC-----------
T ss_pred Cc-cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhc
Confidence 85 78999999999999999999999999999999999999999999999999999999999888765443
No 98
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.91 E-value=3.7e-25 Score=172.08 Aligned_cols=137 Identities=18% Similarity=0.178 Sum_probs=113.3
Q ss_pred cCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChHHHHHHHhCCHHHHHHHHHH-hhhcchhh
Q 047844 30 VTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAPLHVAARYGHAAVVEALIEI-AKQESDQE 108 (264)
Q Consensus 30 ~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~ 108 (264)
.+..|.||||.|+ ..|+ .+++++|++.+.+ ++..|..|+||||+|+..|+.+++++|++. |++++
T Consensus 69 ~~~~g~t~L~~A~--~~g~--------~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~--- 134 (222)
T 3ehr_A 69 QAESIDNPLHEAA--KRGN--------LSWLRECLDNRVG-VNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELN--- 134 (222)
T ss_dssp HEEEESCHHHHHH--HHTC--------HHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCC---
T ss_pred ccccccccccccc--ccCc--------HHHHHHHHhCCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCcc---
Confidence 3557899999999 9999 9999999999988 788999999999999999999999999998 77754
Q ss_pred hhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHhhCCCC
Q 047844 109 IESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANGSGETPLYLAAARAHKEISAEILQKCPSP 188 (264)
Q Consensus 109 ~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~ 188 (264)
.++..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..++.++++.|+..++..
T Consensus 135 --------------~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~ 199 (222)
T 3ehr_A 135 --------------QQNKLGDTALHAAAWKGYADIVQLLLAKGART-DLRNIEKKLAFDMATNAACASLLKKKQGTDAVR 199 (222)
T ss_dssp --------------CCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCS-CCCCTTSCCHHHHCCSHHHHHHHC---------
T ss_pred --------------ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-ccccCCCCCHHHHhcchhHHHHHHHHhccchhh
Confidence 48999999999999999999999999999996 789999999999999999999999999999988
Q ss_pred CcCCCCC
Q 047844 189 AHEGPNG 195 (264)
Q Consensus 189 ~~~~~~g 195 (264)
+..+..+
T Consensus 200 ~~~~~~~ 206 (222)
T 3ehr_A 200 TLSNAED 206 (222)
T ss_dssp -------
T ss_pred hccchhh
Confidence 7776554
No 99
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.91 E-value=2e-24 Score=152.28 Aligned_cols=119 Identities=19% Similarity=0.199 Sum_probs=105.6
Q ss_pred cCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChHHHHHHHhCCHHHHHHHHHHhhhcchhhh
Q 047844 30 VTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAPLHVAARYGHAAVVEALIEIAKQESDQEI 109 (264)
Q Consensus 30 ~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~ 109 (264)
.+..|.||||.|+ ..|+ .+++++|++.+.+ ++..|..|+||||+|+..|+.+++++|++.|++++.
T Consensus 3 ~~~~~~~~l~~A~--~~~~--------~~~v~~ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--- 68 (123)
T 3aaa_C 3 LGSMCDKEFMWAL--KNGD--------LDEVKDYVAKGED-VNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA--- 68 (123)
T ss_dssp ----CHHHHHHHH--HTTC--------HHHHHHHHHTTCC-TTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTC---
T ss_pred cccccchHHHHHH--HcCC--------HHHHHHHHHcCCC-cCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCc---
Confidence 4667899999999 9999 9999999999988 788999999999999999999999999999988544
Q ss_pred hhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCCCCCHHHHHHHhChHHH
Q 047844 110 ESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANGSGETPLYLAAARAHKEI 177 (264)
Q Consensus 110 ~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~~ 177 (264)
++..|.||||+|+..|+.+++++|++.|+++ +.+|..|.||+|+|...+..++
T Consensus 69 --------------~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~~l 121 (123)
T 3aaa_C 69 --------------PDKHHITPLLSAVYEGHVSCVKLLLSKGADK-TVKGPDGLTAFEATDNQAIKAL 121 (123)
T ss_dssp --------------CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHCCCHHHHHH
T ss_pred --------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHhCCHHHHHH
Confidence 8999999999999999999999999999995 7899999999999965544443
No 100
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.91 E-value=1.3e-24 Score=176.49 Aligned_cols=138 Identities=20% Similarity=0.191 Sum_probs=117.1
Q ss_pred cHHHHHHHcCCchHHhhhhhhcccccc------cCCCCCchhHHHHHHhh---hcCcCCCcccHHHHHHHHHhCCcccee
Q 047844 3 SDLYEAAAKGEIEPFNQLAIDRQLGSL------VTHKKNTVLHVNIIASY---TQNKEGESVSTKFVERIIEMCPSLLLQ 73 (264)
Q Consensus 3 ~~l~~A~~~g~~~~~~~l~~~~~~~~~------~~~~g~t~L~~A~~~~~---g~~~~~~~~~~~~~~~ll~~~~~~~~~ 73 (264)
++|+.|+..|+++.++.|++.....+. .+..|.||||+|+ .. |+ .+++++|++++.+ ++.
T Consensus 153 ~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~--~~~~~~~--------~~iv~~Ll~~gad-vn~ 221 (301)
T 2b0o_E 153 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAV--KVANQAS--------LPLVDFIIQNGGH-LDA 221 (301)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHH--HTCCTTT--------HHHHHHHHHHSSC-TTC
T ss_pred HHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHH--HhcccCc--------HHHHHHHHhcCCC-CCC
Confidence 469999999999999999983322222 4788999999999 87 88 9999999999998 789
Q ss_pred cCCCCChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCC
Q 047844 74 VNAKGDAPLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPA 153 (264)
Q Consensus 74 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~ 153 (264)
.|..|+||||+|+..|+.+++++|++.|++++. +|..|.|||++|+..|+.+++++|++.|++
T Consensus 222 ~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~-----------------~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~ 284 (301)
T 2b0o_E 222 KAADGNTALHYAALYNQPDCLKLLLKGRALVGT-----------------VNEAGETALDIARKKHHKECEELLEQAQAG 284 (301)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSC-----------------CCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-----------------cCCCCCCHHHHHHHcCCHHHHHHHHHhcCC
Confidence 999999999999999999999999999998654 899999999999999999999999998876
Q ss_pred CCCCCCCCCCCHHHHHHHhChH
Q 047844 154 FPYSANGSGETPLYLAAARAHK 175 (264)
Q Consensus 154 ~~~~~~~~g~t~Lh~A~~~~~~ 175 (264)
.|.||||+|+..|+.
T Consensus 285 -------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 285 -------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp -------TTSSCCC--------
T ss_pred -------CCCChhHHHHhcCCc
Confidence 479999999988763
No 101
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.91 E-value=8.2e-24 Score=159.61 Aligned_cols=136 Identities=21% Similarity=0.202 Sum_probs=120.3
Q ss_pred CcHHHHHHHcCCchHHhhhhhhcccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecC-CCCCh
Q 047844 2 NSDLYEAAAKGEIEPFNQLAIDRQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVN-AKGDA 80 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~-~~g~t 80 (264)
.||||+|+..|+.++++.|++ ....+..|..|.||||+|+ ..|+ .+++++|++.+.+ ++..+ ..|+|
T Consensus 45 ~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~--~~~~--------~~~v~~Ll~~ga~-~~~~~~~~g~t 112 (183)
T 3deo_A 45 ETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVA--GLGS--------DKCVRLLAEAGAD-LDHRDMRGGLT 112 (183)
T ss_dssp HHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHH--HHTC--------HHHHHHHHHTTCC-TTCCCSSSSCC
T ss_pred CCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHH--HcCC--------HHHHHHHHHcCCC-CCcCCCCCCCC
Confidence 479999999999999999999 4344558999999999999 9999 9999999999999 66666 89999
Q ss_pred HHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCC
Q 047844 81 PLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANG 160 (264)
Q Consensus 81 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~ 160 (264)
|||+|+..|+.+++++|+++|++++. ++..|.||||+|+..++. .
T Consensus 113 pL~~A~~~~~~~~v~~Ll~~ga~~~~-----------------~d~~g~tpl~~A~~~~~~------------------~ 157 (183)
T 3deo_A 113 ALHMAAGYVRPEVVEALVELGADIEV-----------------EDERGLTALELAREILKT------------------T 157 (183)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCCTTC-----------------CCTTSCCHHHHHHHHHHT------------------C
T ss_pred HHHHHHhcCcHHHHHHHHHcCCCCcC-----------------CCCCCCCHHHHHHHhccC------------------c
Confidence 99999999999999999999988554 899999999999874322 3
Q ss_pred CCCCHHHHHHHhChHHHHHHHHhh
Q 047844 161 SGETPLYLAAARAHKEISAEILQK 184 (264)
Q Consensus 161 ~g~t~Lh~A~~~~~~~~~~~Ll~~ 184 (264)
.+.++|++|+..|..+++++|.++
T Consensus 158 ~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 158 PKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred ccccHHHHHHHcCHHHHHHHHHHh
Confidence 468999999999999999999765
No 102
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.91 E-value=9e-24 Score=166.65 Aligned_cols=139 Identities=21% Similarity=0.193 Sum_probs=122.4
Q ss_pred CcHHHHHHHcCCchHHhhhhhhcccccccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecC-CCCCh
Q 047844 2 NSDLYEAAAKGEIEPFNQLAIDRQLGSLVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVN-AKGDA 80 (264)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~-~~g~t 80 (264)
+||||+|+..|+.++++.|++ ....+..|..|.||||+|+ ..|+ .+++++|++.+.+ ++..+ ..|+|
T Consensus 46 ~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~--~~g~--------~~~v~~Ll~~ga~-~~~~~~~~g~t 113 (244)
T 3ui2_A 46 ETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVA--GLGS--------DKCVRLLAEAGAD-LDHRDMRGGLT 113 (244)
T ss_dssp HHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHH--HHTC--------HHHHHHHHHTTCC-TTCCCSSSCCC
T ss_pred CCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHH--HCCC--------HHHHHHHHHcCCC-CCcCCCCCCCC
Confidence 479999999999999999999 3344458999999999999 9999 9999999999999 66666 88999
Q ss_pred HHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCC
Q 047844 81 PLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANG 160 (264)
Q Consensus 81 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~ 160 (264)
|||+|+..|+.+++++|+++|++++. ++..|.||||+|+..+. ..
T Consensus 114 ~L~~A~~~g~~~~v~~Ll~~ga~~~~-----------------~d~~g~t~l~~A~~~~~------------------~~ 158 (244)
T 3ui2_A 114 ALHMAAGYVRPEVVEALVELGADIEV-----------------EDERGLTALELAREILK------------------TT 158 (244)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTC-----------------CCTTCCCHHHHHHHHHT------------------TC
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCC-----------------CCCCCCcHHHHHHHHHh------------------cc
Confidence 99999999999999999999988554 89999999999986321 24
Q ss_pred CCCCHHHHHHHhChHHHHHHHHhhCCC
Q 047844 161 SGETPLYLAAARAHKEISAEILQKCPS 187 (264)
Q Consensus 161 ~g~t~Lh~A~~~~~~~~~~~Ll~~ga~ 187 (264)
.+.||||+|+..|+.+++++|++.+.+
T Consensus 159 ~~~~~l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 159 PKGNPMQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred CCCCHHHHHHHcChHHHHHHHHHhccc
Confidence 579999999999999999999987543
No 103
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.90 E-value=1.7e-23 Score=168.08 Aligned_cols=131 Identities=21% Similarity=0.154 Sum_probs=118.5
Q ss_pred ChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhc---CCHHHHHHHhcCCCCCC
Q 047844 79 DAPLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQS---GSLDVVKILLGADPAFP 155 (264)
Q Consensus 79 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~---~~~~~~~~Ll~~g~~~~ 155 (264)
.++|+.|+..|+.+.++.++..|.+.... ..++..+..|.||||+|+.. |+.+++++|++.|+++
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~-----------~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i- 198 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEK-----------IPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL- 198 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSB-----------CCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT-
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhh-----------ccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCc-
Confidence 57899999999999999999998875321 01344678899999999999 8999999999999996
Q ss_pred CCCCCCCCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCChHHHHHHHhhhCCC
Q 047844 156 YSANGSGETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRSCAASRCHKLHRSSR 221 (264)
Q Consensus 156 ~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~~ 221 (264)
+.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|+.+++.+
T Consensus 199 n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 199 DKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 789999999999999999999999999999999999999999999999999999999999998754
No 104
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.89 E-value=9.6e-23 Score=176.63 Aligned_cols=129 Identities=23% Similarity=0.207 Sum_probs=115.7
Q ss_pred CCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceec------CCCCChHHHHHHH---hCCHHHHHHHHHHhhhc
Q 047844 34 KNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQV------NAKGDAPLHVAAR---YGHAAVVEALIEIAKQE 104 (264)
Q Consensus 34 g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~------~~~g~t~L~~A~~---~g~~~~v~~Ll~~~~~~ 104 (264)
..+.||.|+ ..|+ .+.++.|++.+.+ ++.. +..|.||||+||. .|+.+++++|+++|+++
T Consensus 132 ~~~~L~~A~--~~g~--------~~~v~~ll~~g~~-~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v 200 (497)
T 3lvq_E 132 EPQRLWTAI--CNRD--------LLSVLEAFANGQD-FGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL 200 (497)
T ss_dssp CHHHHHHHH--HHTC--------HHHHHHHHHTTCC-SSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCT
T ss_pred cHHHHHHHH--hccC--------HHHHHHHHhhccc-ccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCC
Confidence 347799999 9999 9999999999988 6655 8899999999977 89999999999999985
Q ss_pred chhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHhh
Q 047844 105 SDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANGSGETPLYLAAARAHKEISAEILQK 184 (264)
Q Consensus 105 ~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ 184 (264)
+. +|..|.||||+|+..|+.+++++|+++|+++ +..|..|+||||+|+..|+.+++++|+++
T Consensus 201 n~-----------------~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ 262 (497)
T 3lvq_E 201 DA-----------------KAADGNTALHYAALYNQPDCLKLLLKGRALV-GTVNEAGETALDIARKKHHKECEELLEQA 262 (497)
T ss_dssp TC-----------------CCSSSCCHHHHHTTTTCHHHHHHHHHTCCCC-SCCCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred Cc-----------------cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHh
Confidence 54 8999999999999999999999999999996 78999999999999999999999999999
Q ss_pred CCCCCcC
Q 047844 185 CPSPAHE 191 (264)
Q Consensus 185 ga~~~~~ 191 (264)
|++++..
T Consensus 263 ga~~~~~ 269 (497)
T 3lvq_E 263 QAGTFAF 269 (497)
T ss_dssp CC-----
T ss_pred CCCCCCC
Confidence 9999874
No 105
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.88 E-value=2.9e-22 Score=134.04 Aligned_cols=90 Identities=31% Similarity=0.389 Sum_probs=43.4
Q ss_pred CCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCC
Q 047844 128 EDTALHEAVQSGSLDVVKILLGADPAFPYSANGSGETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRS 207 (264)
Q Consensus 128 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~ 207 (264)
|.||||+|+..|+.+++++|++.|+++ +.+|..|+||||+|+..++.+++++|+++|++++.+|..|.||||+|+..++
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~-n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 344444444444444444444444443 3444444555555554444555555554444444444445555555555555
Q ss_pred hHHHHHHHhhh
Q 047844 208 CAASRCHKLHR 218 (264)
Q Consensus 208 ~~~~~~l~~~~ 218 (264)
.+++++|+.++
T Consensus 81 ~~~~~~Ll~~g 91 (93)
T 1n0q_A 81 LEVVKLLLEAG 91 (93)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHcC
Confidence 55554444443
No 106
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.88 E-value=1.5e-22 Score=168.12 Aligned_cols=126 Identities=17% Similarity=0.190 Sum_probs=77.4
Q ss_pred CCCChHHHHHHHh-CCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCC--CCCCChhhHHHhcCCHHHHHHHhcCCC
Q 047844 76 AKGDAPLHVAARY-GHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKN--DEEDTALHEAVQSGSLDVVKILLGADP 152 (264)
Q Consensus 76 ~~g~t~L~~A~~~-g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~g~t~L~~A~~~~~~~~~~~Ll~~g~ 152 (264)
..+.|+||.|+.. |+.+++++|++.|++++. .+ ..|.||||+|+..|+.+++++|+++|+
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~-----------------~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Ga 259 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAHGADVNW-----------------VNGGQDNATPLIQATAANSLLACEFLLQNGA 259 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTC-----------------CCTTTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHcCCCCCc-----------------cccccCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence 3445666666666 666666666666655433 33 556666666666666666666666666
Q ss_pred CCCCCCCCCCCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCChHHHHHHHhhhC
Q 047844 153 AFPYSANGSGETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRSCAASRCHKLHRS 219 (264)
Q Consensus 153 ~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~ 219 (264)
++ +..|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|+..+.
T Consensus 260 dv-n~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~ 325 (368)
T 3jue_A 260 NV-NQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKM 325 (368)
T ss_dssp CT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC
T ss_pred CC-CCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence 64 4556666666666666666666666666666666666666666666666666666666655543
No 107
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.88 E-value=3.3e-22 Score=166.11 Aligned_cols=132 Identities=17% Similarity=0.144 Sum_probs=104.5
Q ss_pred ccHHHHHHHHHhCCccceecC--CCCChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChh
Q 047844 55 VSTKFVERIIEMCPSLLLQVN--AKGDAPLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTAL 132 (264)
Q Consensus 55 ~~~~~~~~ll~~~~~~~~~~~--~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L 132 (264)
-..+++++|++.+.+ ++..+ ..|.||||+|+..|+.+++++|+++|++++. +|..|.|||
T Consensus 211 g~~~~v~~LL~~Gad-vn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~-----------------~d~~G~TpL 272 (368)
T 3jue_A 211 PSLPTMADALAHGAD-VNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQ-----------------ADSAGRGPL 272 (368)
T ss_dssp CCHHHHHHHHHTTCC-TTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-----------------CCTTSCCHH
T ss_pred CCHHHHHHHHHcCCC-CCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC-----------------CCCCCCCHH
Confidence 357899999999999 77777 8999999999999999999999999988544 899999999
Q ss_pred hHHHhcCCHHHHHHHhcCCCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHhhCC---CCCcCCCCCccHHhHHHhc
Q 047844 133 HEAVQSGSLDVVKILLGADPAFPYSANGSGETPLYLAAARAHKEISAEILQKCP---SPAHEGPNGKTALHAAVCS 205 (264)
Q Consensus 133 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga---~~~~~~~~g~tpl~~A~~~ 205 (264)
|+|+..|+.+++++|++.|+++ +..|..|.||||+|+..++.+++++|+..+. +....+..+.|+++++...
T Consensus 273 h~A~~~g~~~~v~~LL~~Gad~-~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~ 347 (368)
T 3jue_A 273 HHATILGHTGLACLFLKRGADL-GARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDF 347 (368)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC----------------------
T ss_pred HHHHHcCcHHHHHHHHHCcCCC-CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHH
Confidence 9999999999999999999996 7899999999999999999999999998863 3344556677777776544
No 108
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.88 E-value=9.8e-22 Score=157.80 Aligned_cols=126 Identities=21% Similarity=0.225 Sum_probs=115.6
Q ss_pred CchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCcc-----ceecCCCCChHHHHHHHh---CCHHHHHHHHHHhhhcch
Q 047844 35 NTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSL-----LLQVNAKGDAPLHVAARY---GHAAVVEALIEIAKQESD 106 (264)
Q Consensus 35 ~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~-----~~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~~~~~~~ 106 (264)
.++|+.|+ ..|+ .+.++.+++.+.+. ++..+..|+||||+|+.. |+.+++++|+++|++++.
T Consensus 131 l~~l~~a~--~~~d--------~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~ 200 (278)
T 1dcq_A 131 LHSLCEAV--KTRD--------IFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDK 200 (278)
T ss_dssp HHHHHHHH--HTTC--------HHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTC
T ss_pred hhhhhhHh--hhcc--------cHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccc
Confidence 46899999 9999 99999999999884 344588999999999999 899999999999998554
Q ss_pred hhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHhhCC
Q 047844 107 QEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANGSGETPLYLAAARAHKEISAEILQKCP 186 (264)
Q Consensus 107 ~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga 186 (264)
+|..|.||||+|+..|+.+++++|++.|+++ +.+|..|.||||+|+..|+.+++++|+++|+
T Consensus 201 -----------------~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga 262 (278)
T 1dcq_A 201 -----------------QTGKGSTALHYCCLTDNAECLKLLLRGKASI-EIANESGETPLDIAKRLKHEHCEELLTQALS 262 (278)
T ss_dssp -----------------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred -----------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 8999999999999999999999999999996 7899999999999999999999999999987
Q ss_pred CC
Q 047844 187 SP 188 (264)
Q Consensus 187 ~~ 188 (264)
+.
T Consensus 263 ~~ 264 (278)
T 1dcq_A 263 GR 264 (278)
T ss_dssp TC
T ss_pred CC
Confidence 53
No 109
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.88 E-value=6.5e-22 Score=132.34 Aligned_cols=66 Identities=35% Similarity=0.495 Sum_probs=60.6
Q ss_pred hcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHhhCCC
Q 047844 121 LGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANGSGETPLYLAAARAHKEISAEILQKCPS 187 (264)
Q Consensus 121 l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~ 187 (264)
++.++..|.||||+|+..|+.+++++|++.|+++ +.+|..|+||||+|+..++.+++++|+++|++
T Consensus 28 ~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 28 VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 4678889999999999999999999999999995 78899999999999999999999999999875
No 110
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.87 E-value=1.5e-22 Score=140.95 Aligned_cols=109 Identities=27% Similarity=0.366 Sum_probs=96.5
Q ss_pred ecCCCCChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCC
Q 047844 73 QVNAKGDAPLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADP 152 (264)
Q Consensus 73 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~ 152 (264)
.+|.+|+||||+|+..|+.+++++|++.|++++. ++..|.||||+|+..|+.+++++|++.|+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-----------------~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~ 66 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNA-----------------RSKDGNTPLHLAAKNGHAEIVKLLLAKGA 66 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSC-----------------CCSSSCCTTHHHHTTTCHHHHHHHTTTTC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-----------------cCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 4688999999999999999999999998877544 88899999999999999999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccHH
Q 047844 153 AFPYSANGSGETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKTAL 199 (264)
Q Consensus 153 ~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl 199 (264)
++ +.+|..|+||||+|+..++.+++++|+++|++++.++..|.+|-
T Consensus 67 ~~-~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 67 DV-NARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp CT-TCCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred CC-cccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 85 68888999999999999999999999999999999999888874
No 111
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.87 E-value=1.3e-21 Score=169.55 Aligned_cols=132 Identities=17% Similarity=0.086 Sum_probs=117.1
Q ss_pred CChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHh---cCCHHHHHHHhcCCCCC
Q 047844 78 GDAPLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQ---SGSLDVVKILLGADPAF 154 (264)
Q Consensus 78 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~---~~~~~~~~~Ll~~g~~~ 154 (264)
..+.||.|+..|+.+.++.|++.|++++.... ....+..|.||||+|+. .|+.+++++|++.|+++
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~-----------~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v 200 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLP-----------GPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL 200 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBC-----------CSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCT
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCC-----------CcccccccchHHHHHHHhcccccHHHHHHHHHcCCCC
Confidence 34789999999999999999999988654100 01137889999999966 89999999999999996
Q ss_pred CCCCCCCCCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccHHhHHHhcCChHHHHHHHhhhCCC
Q 047844 155 PYSANGSGETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKTALHAAVCSRSCAASRCHKLHRSSR 221 (264)
Q Consensus 155 ~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~l~~~~~~~ 221 (264)
+..|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|+.+++..
T Consensus 201 -n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~ 266 (497)
T 3lvq_E 201 -DAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGT 266 (497)
T ss_dssp -TCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC--
T ss_pred -CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCC
Confidence 789999999999999999999999999999999999999999999999999999999999998863
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.84 E-value=2.3e-21 Score=134.89 Aligned_cols=109 Identities=21% Similarity=0.315 Sum_probs=98.8
Q ss_pred ccCCCCCchhHHHHHHhhhcCcCCCcccHHHHHHHHHhCCccceecCCCCChHHHHHHHhCCHHHHHHHHHHhhhcchhh
Q 047844 29 LVTHKKNTVLHVNIIASYTQNKEGESVSTKFVERIIEMCPSLLLQVNAKGDAPLHVAARYGHAAVVEALIEIAKQESDQE 108 (264)
Q Consensus 29 ~~~~~g~t~L~~A~~~~~g~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~ 108 (264)
..|.+|.||||.|+ ..|+ .+++++|++.+.+ ++..|..|.||||+|+..|+.+++++|++.|++++.
T Consensus 4 ~~d~~g~t~L~~A~--~~~~--------~~~~~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-- 70 (115)
T 2l6b_A 4 WGSKDGNTPLHNAA--KNGH--------AEEVKKLLSKGAD-VNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNA-- 70 (115)
T ss_dssp CCSCSSCCHHHHHH--HHTC--------HHHHHHHTTTTCC-SSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTC--
T ss_pred ccCCCCCCHHHHHH--HcCC--------HHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcc--
Confidence 37899999999999 9999 9999999999988 788999999999999999999999999999988544
Q ss_pred hhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCCCCCHH
Q 047844 109 IESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANGSGETPL 166 (264)
Q Consensus 109 ~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L 166 (264)
++..|.||||+|+..|+.+++++|+++|+++ +.++..|.+|-
T Consensus 71 ---------------~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~-n~~~~~~~~~~ 112 (115)
T 2l6b_A 71 ---------------RSKDGNTPEHLAKKNGHHEIVKLLDAKGADV-NARSWGSSHHH 112 (115)
T ss_dssp ---------------CCTTCCCTTHHHHTTTCHHHHHHHHTTSSSH-HHHSCCCC---
T ss_pred ---------------cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CcCCccccccc
Confidence 8899999999999999999999999999996 67888888874
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.80 E-value=2.7e-19 Score=123.39 Aligned_cols=93 Identities=24% Similarity=0.274 Sum_probs=85.1
Q ss_pred hcCCCCCCCChhhHHHhcCCHHHHHHHhcCCCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHhhCCCCCcCCCCCccHHh
Q 047844 121 LGMKNDEEDTALHEAVQSGSLDVVKILLGADPAFPYSANGSGETPLYLAAARAHKEISAEILQKCPSPAHEGPNGKTALH 200 (264)
Q Consensus 121 l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~ 200 (264)
....+.+|.|+||+|+..|+.+++++|++.|+++ +..|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i-~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~ 95 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADV-AAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFD 95 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHH
Confidence 3447889999999999999999999999999996 788999999999999999999999999999999999999999999
Q ss_pred HHHhcCChHHHHHH
Q 047844 201 AAVCSRSCAASRCH 214 (264)
Q Consensus 201 ~A~~~~~~~~~~~l 214 (264)
+|+..++.+++++|
T Consensus 96 ~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 96 ISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHTCHHHHHHH
T ss_pred HHHHcCCHHHHHHh
Confidence 99999999999886
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.78 E-value=8.8e-19 Score=120.77 Aligned_cols=93 Identities=24% Similarity=0.327 Sum_probs=82.8
Q ss_pred ceecCCCCChHHHHHHHhCCHHHHHHHHHHhhhcchhhhhhchhhHHHHHhcCCCCCCCChhhHHHhcCCHHHHHHHhcC
Q 047844 71 LLQVNAKGDAPLHVAARYGHAAVVEALIEIAKQESDQEIESGVESTARHMLGMKNDEEDTALHEAVQSGSLDVVKILLGA 150 (264)
Q Consensus 71 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 150 (264)
....+.+|.||||+|+..|+.+++++|++.|++++ .++..|.||||+|+..|+.+++++|++.
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~-----------------~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ 79 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADVA-----------------AKDKNGSTPLHLAARNGHLEVVKLLLEA 79 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTT-----------------CCCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCC-----------------ccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 45668899999999999999999999999988754 4889999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHhChHHHHHHH
Q 047844 151 DPAFPYSANGSGETPLYLAAARAHKEISAEI 181 (264)
Q Consensus 151 g~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~L 181 (264)
|+++ +.+|..|+||||+|+..++.+++++|
T Consensus 80 ga~~-~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 80 GADV-XAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp TCCT-TCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred CCCc-cccccCCCcHHHHHHHcCCHHHHHHh
Confidence 9995 78999999999999999999999887
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=45.15 E-value=12 Score=19.27 Aligned_cols=19 Identities=32% Similarity=0.628 Sum_probs=15.5
Q ss_pred HHHHHHHcCCchHHhhhhh
Q 047844 4 DLYEAAAKGEIEPFNQLAI 22 (264)
Q Consensus 4 ~l~~A~~~g~~~~~~~l~~ 22 (264)
.+..||..|+.+.++.|-.
T Consensus 16 qiyvA~seGd~etv~~Le~ 34 (40)
T 1gp8_A 16 QMDAAASKGDVETYRKLKA 34 (40)
T ss_dssp HHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHHH
Confidence 3678899999999988754
Done!