Your job contains 1 sequence.
>047846
LDGIRTFERTVVLLLRSGTRHPQEGPFGVVINRPLHKKIKHMKPTNHELATTFADCSLHF
GGPLEASMFLLKTGQSKLPGFEEVIPGLCFGARNSLDEAAALVKKGVLKPQDFRFFVGYA
GWQLDQLREEIESDYWYVAACSSDLICGATSDTSSESLWEEILQLMGGHYSELSRKPKQD
M
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 047846
(181 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2012628 - symbol:AT1G33780 species:3702 "Arabi... 795 4.2e-79 1
TAIR|locus:2094817 - symbol:AT3G29240 "AT3G29240" species... 339 8.8e-31 1
UNIPROTKB|P67757 - symbol:MT0043 "UPF0301 protein Rv0038/... 161 6.4e-12 1
UNIPROTKB|Q83A18 - symbol:CBU_2093 "UPF0301 protein CBU_2... 153 4.5e-11 1
TIGR_CMR|CBU_2093 - symbol:CBU_2093 "conserved hypothetic... 153 4.5e-11 1
UNIPROTKB|Q8EBZ9 - symbol:SO_3346 "UPF0301 protein SO_334... 147 2.0e-10 1
TIGR_CMR|SO_3346 - symbol:SO_3346 "conserved hypothetical... 147 2.0e-10 1
UNIPROTKB|Q5LX84 - symbol:SPO0296 "UPF0301 protein SPO029... 126 1.3e-07 1
TIGR_CMR|SPO_0296 - symbol:SPO_0296 "conserved hypothetic... 126 1.3e-07 1
UNIPROTKB|Q0C3C2 - symbol:HNE_1049 "UPF0301 protein HNE_1... 126 1.7e-07 1
TAIR|locus:2092241 - symbol:AT3G19780 species:3702 "Arabi... 132 4.0e-07 1
UNIPROTKB|Q605E8 - symbol:MCA2336 "UPF0301 protein MCA233... 108 0.00011 1
UNIPROTKB|Q60BQ2 - symbol:MCA0413 "UPF0301 protein MCA041... 104 0.00035 1
>TAIR|locus:2012628 [details] [associations]
symbol:AT1G33780 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009543
"chloroplast thylakoid lumen" evidence=ISS] [GO:0019243
"methylglyoxal catabolic process to D-lactate" evidence=RCA]
EMBL:CP002684 GO:GO:0009507 eggNOG:COG1678 InterPro:IPR003774
Pfam:PF02622 EMBL:AY062812 EMBL:AY081586 IPI:IPI00530544
RefSeq:NP_174638.2 UniGene:At.15837 ProteinModelPortal:Q8W467
SMR:Q8W467 PaxDb:Q8W467 PRIDE:Q8W467 DNASU:840269
EnsemblPlants:AT1G33780.1 GeneID:840269 KEGG:ath:AT1G33780
TAIR:At1g33780 HOGENOM:HOG000238547 InParanoid:Q8W467 OMA:ASSENLW
PhylomeDB:Q8W467 ProtClustDB:CLSN2690437 ArrayExpress:Q8W467
Genevestigator:Q8W467 Uniprot:Q8W467
Length = 325
Score = 795 (284.9 bits), Expect = 4.2e-79, P = 4.2e-79
Identities = 154/182 (84%), Positives = 166/182 (91%)
Query: 1 LDGIRTFERTVVLLLRSGTRHPQEGPFGVVINRPLHKKIKHMKPTNHELATTFADCSLHF 60
LDG RTF RTVVLLLR+GTRHPQEGPFGVVINRPLHK IKHMK T ELATTF++CSL+F
Sbjct: 148 LDGYRTFARTVVLLLRAGTRHPQEGPFGVVINRPLHKNIKHMKSTKTELATTFSECSLYF 207
Query: 61 GGPLEASMFLLKTG-QSKLPGFEEVIPGLCFGARNSLDEAAALVKKGVLKPQDFRFFVGY 119
GGPLEASMFLLKTG ++K+PGFEEV+PGL FG RNSLDEAA LVKKGVLKPQ+FRFFVGY
Sbjct: 208 GGPLEASMFLLKTGDKTKIPGFEEVMPGLNFGTRNSLDEAAVLVKKGVLKPQEFRFFVGY 267
Query: 120 AGWQLDQLREEIESDYWYVAACSSDLICGATSDTSSESLWEEILQLMGGHYSELSRKPKQ 179
AGWQLDQLREEIESDYW+VAACSSDLICGA SSE+LWEEILQLMGG YSELSRKPK
Sbjct: 268 AGWQLDQLREEIESDYWHVAACSSDLICGA----SSENLWEEILQLMGGQYSELSRKPKL 323
Query: 180 DM 181
D+
Sbjct: 324 DI 325
>TAIR|locus:2094817 [details] [associations]
symbol:AT3G29240 "AT3G29240" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009543 "chloroplast
thylakoid lumen" evidence=ISS] [GO:0009507 "chloroplast"
evidence=IDA] GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AB026657 InterPro:IPR003774 Pfam:PF02622 HOGENOM:HOG000238547
EMBL:AY079021 EMBL:AY084920 EMBL:AY139756 EMBL:BT004545
IPI:IPI00538535 RefSeq:NP_566847.1 RefSeq:NP_850648.1
UniGene:At.21226 ProteinModelPortal:Q9LS71 SMR:Q9LS71 PaxDb:Q9LS71
PRIDE:Q9LS71 EnsemblPlants:AT3G29240.1 EnsemblPlants:AT3G29240.2
GeneID:822579 KEGG:ath:AT3G29240 TAIR:At3g29240 eggNOG:NOG327451
InParanoid:Q9LS71 OMA:GYCGWEK PhylomeDB:Q9LS71
ProtClustDB:CLSN2688902 Genevestigator:Q9LS71 Uniprot:Q9LS71
Length = 317
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 76/173 (43%), Positives = 105/173 (60%)
Query: 1 LDGIRTFERTVVLLLRSGTRHPQEGPFGVVINRPLHKKIKHMKPTNHELATTFADCSLHF 60
LDG+ FE+TV+LLL G P GP GV++NRP IK K T ++A TF+D L F
Sbjct: 143 LDGVHIFEKTVILLLSVG---PS-GPIGVILNRPSLMSIKETKSTILDMAGTFSDKRLFF 198
Query: 61 GGPLEASMFLL--KTGQSKLPG----FEEVIPGLCFGARNSLDEAAALVKKGVLKPQDFR 114
GGPLE +FL+ ++G G F +V+ GL +G R S+ AA +VK+ ++ + R
Sbjct: 199 GGPLEEGLFLVSPRSGGDNEVGKSGVFRQVMKGLYYGTRESVGLAAEMVKRNLVGRSELR 258
Query: 115 FFVGYAGWQLDQLREEIESDYWYVAACSSDLICGATSDTSSESLWEEILQLMG 167
FF GY GW+ +QL+ EI YW VAACSS ++ S S LW+E+L L+G
Sbjct: 259 FFDGYCGWEKEQLKAEILGGYWTVAACSSTVV-ELGSAVQSHGLWDEVLGLIG 310
>UNIPROTKB|P67757 [details] [associations]
symbol:MT0043 "UPF0301 protein Rv0038/MT0043" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] GO:GO:0005886 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842572 PIR:D70702
RefSeq:NP_214552.1 RefSeq:NP_334452.1 RefSeq:YP_006513352.1
ProteinModelPortal:P67757 SMR:P67757 PRIDE:P67757
EnsemblBacteria:EBMYCT00000001659 EnsemblBacteria:EBMYCT00000071342
GeneID:13316016 GeneID:887045 GeneID:922630 KEGG:mtc:MT0043
KEGG:mtu:Rv0038 KEGG:mtv:RVBD_0038 PATRIC:18121821
TubercuList:Rv0038 eggNOG:COG1678 HOGENOM:HOG000281194 KO:K07735
OMA:LRIFAGY ProtClustDB:PRK00228 HAMAP:MF_00758 InterPro:IPR003774
Pfam:PF02622 Uniprot:P67757
Length = 202
Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 55/179 (30%), Positives = 86/179 (48%)
Query: 6 TFERTVVLLLRSGTRHPQEGPFGVVINRPLHKKIKHMKPTNHELATTFADCSLHFGGPL- 64
TF R+V+ ++ H G GVV+NRP + ++ P +LA ++ GGP+
Sbjct: 35 TFRRSVIYIVE----HNDGGTLGVVLNRPSETAVYNVLPQWAKLAAK--PKTMFIGGPVK 88
Query: 65 -EASMFL--LKTGQSK--LPGFEEVIPGLCFGARNSLDEAAALVKKGVLKPQDFRFFVGY 119
+A++ L L+ G +PG V L ++ E A +GV R + GY
Sbjct: 89 RDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLDADPEVLAAAVEGV------RIYAGY 142
Query: 120 AGWQLDQLREEIESDYWYV-AACSSDLICGATSDTSSESLWEEIL--QLMGGHYSELSR 175
+GW + QL EIE D W V +A SD++ G +D + L + L L+ H +LSR
Sbjct: 143 SGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLRRQPLPLSLLATHPIDLSR 201
>UNIPROTKB|Q83A18 [details] [associations]
symbol:CBU_2093 "UPF0301 protein CBU_2093" species:227377
"Coxiella burnetii RSA 493" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:AE016828
GenomeReviews:AE016828_GR eggNOG:COG1678 KO:K07735 HAMAP:MF_00758
InterPro:IPR003774 Pfam:PF02622 HOGENOM:HOG000281193
RefSeq:NP_821063.2 ProteinModelPortal:Q83A18 PRIDE:Q83A18
GeneID:1210006 KEGG:cbu:CBU_2093 PATRIC:17932935 OMA:VETGRGF
ProtClustDB:CLSK915240 BioCyc:CBUR227377:GJ7S-2059-MONOMER
Uniprot:Q83A18
Length = 194
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 50/172 (29%), Positives = 87/172 (50%)
Query: 6 TFERTVVLLLRSGTRHPQEGPFGVVINRPLHKKI-KHMKPTNHELATT-FADCSLHFGGP 63
TF + V+ + ++H +G G++INRPL + K ++ N E+A A+ + GGP
Sbjct: 35 TFTKAVIYV----SQHDAKGALGIIINRPLALTLGKVLEHLNIEIAQPQIANHPVLMGGP 90
Query: 64 L-EASMFLLKTGQSKLPGFEEVIPGLCFGARNSLDEAAALVKKGVLKPQDFRFFVGYAGW 122
+ + F++ +S P E+ L +++ LD+ A KG P DF +GYAGW
Sbjct: 91 IGQEHGFIVYEQES--PQGAEI---LLSASKDMLDDIAK--NKG---PDDFLITLGYAGW 140
Query: 123 QLDQLREEIESDYWYVAACSSDLICGATSDTSSESLWEEILQLMGGHYSELS 174
+ QL EI + W V + ++ +T +S W++ L+G ++LS
Sbjct: 141 EAGQLENEIARNDWLVVPFNRKILF----ETPLKSRWQKAAALIGVDINQLS 188
>TIGR_CMR|CBU_2093 [details] [associations]
symbol:CBU_2093 "conserved hypothetical protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
EMBL:AE016828 GenomeReviews:AE016828_GR eggNOG:COG1678 KO:K07735
HAMAP:MF_00758 InterPro:IPR003774 Pfam:PF02622 HOGENOM:HOG000281193
RefSeq:NP_821063.2 ProteinModelPortal:Q83A18 PRIDE:Q83A18
GeneID:1210006 KEGG:cbu:CBU_2093 PATRIC:17932935 OMA:VETGRGF
ProtClustDB:CLSK915240 BioCyc:CBUR227377:GJ7S-2059-MONOMER
Uniprot:Q83A18
Length = 194
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 50/172 (29%), Positives = 87/172 (50%)
Query: 6 TFERTVVLLLRSGTRHPQEGPFGVVINRPLHKKI-KHMKPTNHELATT-FADCSLHFGGP 63
TF + V+ + ++H +G G++INRPL + K ++ N E+A A+ + GGP
Sbjct: 35 TFTKAVIYV----SQHDAKGALGIIINRPLALTLGKVLEHLNIEIAQPQIANHPVLMGGP 90
Query: 64 L-EASMFLLKTGQSKLPGFEEVIPGLCFGARNSLDEAAALVKKGVLKPQDFRFFVGYAGW 122
+ + F++ +S P E+ L +++ LD+ A KG P DF +GYAGW
Sbjct: 91 IGQEHGFIVYEQES--PQGAEI---LLSASKDMLDDIAK--NKG---PDDFLITLGYAGW 140
Query: 123 QLDQLREEIESDYWYVAACSSDLICGATSDTSSESLWEEILQLMGGHYSELS 174
+ QL EI + W V + ++ +T +S W++ L+G ++LS
Sbjct: 141 EAGQLENEIARNDWLVVPFNRKILF----ETPLKSRWQKAAALIGVDINQLS 188
>UNIPROTKB|Q8EBZ9 [details] [associations]
symbol:SO_3346 "UPF0301 protein SO_3346" species:211586
"Shewanella oneidensis MR-1" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:AE014299
GenomeReviews:AE014299_GR eggNOG:COG1678 KO:K07735 HAMAP:MF_00758
InterPro:IPR003774 Pfam:PF02622 HOGENOM:HOG000281193 OMA:VETGRGF
RefSeq:NP_718900.1 PDB:2GZO PDBsum:2GZO ProteinModelPortal:Q8EBZ9
SMR:Q8EBZ9 GeneID:1171028 KEGG:son:SO_3346 PATRIC:23526366
ProtClustDB:CLSK907119 EvolutionaryTrace:Q8EBZ9 Uniprot:Q8EBZ9
Length = 187
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 50/174 (28%), Positives = 75/174 (43%)
Query: 7 FERTVVLLLRSGTRHPQEGPFGVVINRPL----HKKIKHMK-PTNHELATTFADCSLHFG 61
FERTV+ L H ++G G+VIN+PL + ++ M PT A + G
Sbjct: 20 FERTVIYLCE----HDEKGAMGLVINKPLGIEVNSLLEQMDLPTEQVSADLAMGSQVLMG 75
Query: 62 GPLEASM-FLLKTGQSKLPGFEEVIPGLCFGARNSLDEAAALVKKGVLKPQDFRFFVGYA 120
GP+ F+L T Q E+ GL S D A+ K P F +GYA
Sbjct: 76 GPVSQDRGFVLHTSQPYWANSTELGSGLML--TTSRDVLTAIGSKR--SPDKFLVALGYA 131
Query: 121 GWQLDQLREEIESDYWYVAACSSDLICGATSDTSSESLWEEILQLMGGHYSELS 174
GW +QL +E+ + W L+ D + E W++ + +G +LS
Sbjct: 132 GWSKNQLEQELADNSWLTIPADHALLF----DINHEDRWQQASRSLGFEAWQLS 181
>TIGR_CMR|SO_3346 [details] [associations]
symbol:SO_3346 "conserved hypothetical protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
EMBL:AE014299 GenomeReviews:AE014299_GR eggNOG:COG1678 KO:K07735
HAMAP:MF_00758 InterPro:IPR003774 Pfam:PF02622 HOGENOM:HOG000281193
OMA:VETGRGF RefSeq:NP_718900.1 PDB:2GZO PDBsum:2GZO
ProteinModelPortal:Q8EBZ9 SMR:Q8EBZ9 GeneID:1171028
KEGG:son:SO_3346 PATRIC:23526366 ProtClustDB:CLSK907119
EvolutionaryTrace:Q8EBZ9 Uniprot:Q8EBZ9
Length = 187
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 50/174 (28%), Positives = 75/174 (43%)
Query: 7 FERTVVLLLRSGTRHPQEGPFGVVINRPL----HKKIKHMK-PTNHELATTFADCSLHFG 61
FERTV+ L H ++G G+VIN+PL + ++ M PT A + G
Sbjct: 20 FERTVIYLCE----HDEKGAMGLVINKPLGIEVNSLLEQMDLPTEQVSADLAMGSQVLMG 75
Query: 62 GPLEASM-FLLKTGQSKLPGFEEVIPGLCFGARNSLDEAAALVKKGVLKPQDFRFFVGYA 120
GP+ F+L T Q E+ GL S D A+ K P F +GYA
Sbjct: 76 GPVSQDRGFVLHTSQPYWANSTELGSGLML--TTSRDVLTAIGSKR--SPDKFLVALGYA 131
Query: 121 GWQLDQLREEIESDYWYVAACSSDLICGATSDTSSESLWEEILQLMGGHYSELS 174
GW +QL +E+ + W L+ D + E W++ + +G +LS
Sbjct: 132 GWSKNQLEQELADNSWLTIPADHALLF----DINHEDRWQQASRSLGFEAWQLS 181
>UNIPROTKB|Q5LX84 [details] [associations]
symbol:SPO0296 "UPF0301 protein SPO0296" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:CP000031
GenomeReviews:CP000031_GR eggNOG:COG1678 KO:K07735 HAMAP:MF_00758
InterPro:IPR003774 Pfam:PF02622 HSSP:Q8EBZ9 HOGENOM:HOG000281193
OMA:VETGRGF RefSeq:YP_165559.1 ProteinModelPortal:Q5LX84
GeneID:3195560 KEGG:sil:SPO0296 PATRIC:23373845 Uniprot:Q5LX84
Length = 184
Score = 126 (49.4 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 45/167 (26%), Positives = 75/167 (44%)
Query: 7 FERTVVLLLRSGTRHPQEGPFGVVINRPLHKKIKHMKPTNHELATTFADCS---LHFGGP 63
FER+V+ L H ++G G+++N+P + + E+ ++ A + + GGP
Sbjct: 19 FERSVIFLCS----HGEDGAMGLIVNKPADLNVSTLLE-QLEIPSSSAAAARAPVRLGGP 73
Query: 64 LE-ASMFLLKTGQ--SKLPGFEEVIPGLCFGARNSLDEAAALVKKGVLKPQDFRFFVGYA 120
+E A F+L + KL + V G A +LD + + P +GY+
Sbjct: 74 VEMARGFVLHSPDYAGKLQSLK-VSDGFVMTA--TLDILEDIARDN--GPARAALMLGYS 128
Query: 121 GWQLDQLREEIESDYWYVAACSSDLICGATSDTSSESLWEEILQLMG 167
GW QL EI + W A D++ G+ D WE L+L+G
Sbjct: 129 GWGPGQLEAEIGDNGWLTADADPDIVFGSRDDGK----WEAALKLLG 171
>TIGR_CMR|SPO_0296 [details] [associations]
symbol:SPO_0296 "conserved hypothetical protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000031 GenomeReviews:CP000031_GR eggNOG:COG1678 KO:K07735
HAMAP:MF_00758 InterPro:IPR003774 Pfam:PF02622 HSSP:Q8EBZ9
HOGENOM:HOG000281193 OMA:VETGRGF RefSeq:YP_165559.1
ProteinModelPortal:Q5LX84 GeneID:3195560 KEGG:sil:SPO0296
PATRIC:23373845 Uniprot:Q5LX84
Length = 184
Score = 126 (49.4 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 45/167 (26%), Positives = 75/167 (44%)
Query: 7 FERTVVLLLRSGTRHPQEGPFGVVINRPLHKKIKHMKPTNHELATTFADCS---LHFGGP 63
FER+V+ L H ++G G+++N+P + + E+ ++ A + + GGP
Sbjct: 19 FERSVIFLCS----HGEDGAMGLIVNKPADLNVSTLLE-QLEIPSSSAAAARAPVRLGGP 73
Query: 64 LE-ASMFLLKTGQ--SKLPGFEEVIPGLCFGARNSLDEAAALVKKGVLKPQDFRFFVGYA 120
+E A F+L + KL + V G A +LD + + P +GY+
Sbjct: 74 VEMARGFVLHSPDYAGKLQSLK-VSDGFVMTA--TLDILEDIARDN--GPARAALMLGYS 128
Query: 121 GWQLDQLREEIESDYWYVAACSSDLICGATSDTSSESLWEEILQLMG 167
GW QL EI + W A D++ G+ D WE L+L+G
Sbjct: 129 GWGPGQLEAEIGDNGWLTADADPDIVFGSRDDGK----WEAALKLLG 171
>UNIPROTKB|Q0C3C2 [details] [associations]
symbol:HNE_1049 "UPF0301 protein HNE_1049" species:228405
"Hyphomonas neptunium ATCC 15444" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:CP000158
GenomeReviews:CP000158_GR eggNOG:COG1678 KO:K07735 HAMAP:MF_00758
InterPro:IPR003774 Pfam:PF02622 HOGENOM:HOG000281193 OMA:VETGRGF
RefSeq:YP_759771.1 ProteinModelPortal:Q0C3C2 STRING:Q0C3C2
GeneID:4288325 KEGG:hne:HNE_1049 PATRIC:32214905
BioCyc:HNEP228405:GI69-1087-MONOMER Uniprot:Q0C3C2
Length = 188
Score = 126 (49.4 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 49/175 (28%), Positives = 75/175 (42%)
Query: 7 FERTVVLLLRSGTRHPQEGPFGVVINRP-----LHKKIKHMK-PTNHELATTFADCSLHF 60
FER+V+L+ H + G+++N+P L + I M P + +L ++
Sbjct: 23 FERSVILVCA----HTPDFAMGIILNKPMDGIDLQEIIDQMDIPQDVDLEGV----AILE 74
Query: 61 GGPLEASM-FLLKTGQSKLPGFE-EVIPGLCFGARNSLDEAAALVKKGVLKPQDFRFFVG 118
GGP+ F+L T G EV LC A + + A P+ F +G
Sbjct: 75 GGPVATERGFVLHTDDVICDGATMEVEDELCMTATREILASIA----SAAPPRKFVMALG 130
Query: 119 YAGWQLDQLREEIESDYWYVAACSSDLICGATSDTSSESLWEEILQLMGGHYSEL 173
YAGW QL +E+ + W + A SDL+ G + E W + MG S L
Sbjct: 131 YAGWGAGQLEQELAQNAWLIGAPDSDLVFG----DAYEHKWRHAMTRMGVDLSRL 181
>TAIR|locus:2092241 [details] [associations]
symbol:AT3G19780 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] EMBL:CP002686
Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF52833
InterPro:IPR003774 Pfam:PF02622 IPI:IPI00527787 RefSeq:NP_566646.5
UniGene:At.50205 UniGene:At.66501 ProteinModelPortal:F4JCD3
SMR:F4JCD3 PRIDE:F4JCD3 EnsemblPlants:AT3G19780.1 GeneID:821515
KEGG:ath:AT3G19780 OMA:FHGLIIN Uniprot:F4JCD3
Length = 1059
Score = 132 (51.5 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 39/138 (28%), Positives = 66/138 (47%)
Query: 6 TFERTVVLLLRSGTRHPQEGPFGVVINRPLHKKIKHMKPTNHELATTFADCSLHFGGPL- 64
TF ++ +L++++G P+ G G++ N+ + K P E A + L FGGP+
Sbjct: 918 TFAKSKILIIKAG---PEIGFLGLIFNKRIRWK---SFPDLGETAELLKETPLSFGGPVV 971
Query: 65 EASMFLL----KTGQSKLPGFEEVIPGLCFGARNSLDEAAALVKKGVLKPQDFRFFVGYA 120
+ + LL + S E+ PG+ F S+ +K L P ++ FF+GY+
Sbjct: 972 DPGIPLLALTRERDSSTNHDHPEISPGVYFLDHQSVARRIQELKSRELNPSEYWFFLGYS 1031
Query: 121 GWQLDQLREEIESDYWYV 138
W +QL +EI W V
Sbjct: 1032 SWSYEQLFDEIGLGVWDV 1049
>UNIPROTKB|Q605E8 [details] [associations]
symbol:MCA2336 "UPF0301 protein MCA2336 2" species:243233
"Methylococcus capsulatus str. Bath" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:AE017282 GenomeReviews:AE017282_GR eggNOG:COG1678 KO:K07735
HAMAP:MF_00758 InterPro:IPR003774 Pfam:PF02622 HSSP:Q8EBZ9
HOGENOM:HOG000281193 OMA:VETGRGF RefSeq:YP_114752.1
ProteinModelPortal:Q605E8 GeneID:3102526 KEGG:mca:MCA2336
PATRIC:22608530 Uniprot:Q605E8
Length = 188
Score = 108 (43.1 bits), Expect = 0.00011, P = 0.00011
Identities = 40/143 (27%), Positives = 60/143 (41%)
Query: 7 FERTVVLLLRSGTRHPQEGPFGVVINRPLHKKIKH-MKPTNHELATT-FADCSLHFGGPL 64
F +TV L+ + H +G G++INRP K+ M+ +L D + FGGP+
Sbjct: 24 FAKTVTLVCQ----HNADGALGIIINRPSELKLSDIMRQMEIDLKVAELGDLPVFFGGPV 79
Query: 65 EASM-FLLKTGQSKLPGFEEVIPGLCFGARNSLDEAAALVKKGVLKPQDFRFFVGYAGWQ 123
F+L + V L + EA V +G P+ +GYAGW
Sbjct: 80 HPERGFILHEPATVWASTLVVSERLALTTSRDILEA---VGRGE-GPRRMLLALGYAGWG 135
Query: 124 LDQLREEIESDYWYVAACSSDLI 146
QL EI + W A + +I
Sbjct: 136 QGQLEREIIDNSWLNAPSDNAVI 158
>UNIPROTKB|Q60BQ2 [details] [associations]
symbol:MCA0413 "UPF0301 protein MCA0413 1" species:243233
"Methylococcus capsulatus str. Bath" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:AE017282 GenomeReviews:AE017282_GR eggNOG:COG1678
HAMAP:MF_00758 InterPro:IPR003774 Pfam:PF02622 HOGENOM:HOG000281193
RefSeq:YP_112944.1 HSSP:Q6FF54 ProteinModelPortal:Q60BQ2
GeneID:3103494 KEGG:mca:MCA0413 PATRIC:22604575 OMA:GDKIFHN
Uniprot:Q60BQ2
Length = 182
Score = 104 (41.7 bits), Expect = 0.00035, P = 0.00035
Identities = 43/155 (27%), Positives = 64/155 (41%)
Query: 21 HPQEGPFGVVINR-----PLHKKIKHMKPTNHELATTFA-DCSLHFGGPLEASM-FLLKT 73
H +G G+++NR PL K ++ LA+ + L+ GGP+ F+L +
Sbjct: 39 HNADGAMGLIVNRLAGAGPLGKLLEAFG-----LASKAQREIKLYLGGPVGIGQGFVLHS 93
Query: 74 GQSKLPGFEEVIPGLCFGARNSLDEAAALVK-KGVLKPQDFRFFVGYAGWQLDQLREEIE 132
+ GL LD A+ + +G P+ R GYAGW QL EI
Sbjct: 94 DDYAGASTRALKKGLSLST--GLDVLEAIARGRG---PRQVRMLFGYAGWSPGQLDGEIA 148
Query: 133 SDYWYVAACSSDLICGATSDTSSESLWEEILQLMG 167
W +A + LI D +WEE L+ G
Sbjct: 149 RGDWLLAPADTSLIFSEEPD----KVWEEALKHAG 179
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.421 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 181 181 0.00095 109 3 11 22 0.42 32
31 0.40 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 13
No. of states in DFA: 605 (64 KB)
Total size of DFA: 172 KB (2100 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 16.57u 0.06s 16.63t Elapsed: 00:00:10
Total cpu time: 16.57u 0.07s 16.64t Elapsed: 00:00:11
Start: Thu May 9 21:01:28 2013 End: Thu May 9 21:01:39 2013