Query 047846
Match_columns 181
No_of_seqs 120 out of 857
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 05:55:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047846.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047846hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ew0_A Hypothetical protein ac 100.0 6E-52 2E-56 333.7 10.3 165 3-179 18-183 (192)
2 2gzo_A UPF0301 protein SO3346; 100.0 1.5E-51 5.1E-56 332.1 8.3 166 3-180 16-187 (195)
3 2gs5_A Conserved hypothetical 100.0 4E-50 1.4E-54 324.5 10.9 158 3-179 28-194 (198)
4 2haf_A Putative translation re 100.0 1.8E-50 6.1E-55 329.2 7.7 163 3-177 30-199 (211)
5 2do8_A UPF0301 protein HD_1794 100.0 1.2E-49 4.1E-54 319.5 3.9 157 3-171 17-179 (188)
6 2do5_A Splicing factor 3B subu 17.9 45 0.0015 20.5 1.1 16 118-133 7-22 (58)
7 2z84_A UFSP1, UFM1-specific pr 13.1 2E+02 0.0068 22.7 4.0 68 55-139 137-206 (218)
8 1fmh_A General control protein 12.1 76 0.0026 17.1 0.9 7 126-132 19-25 (33)
9 3gxh_A Putative phosphatase (D 10.6 4.5E+02 0.015 18.5 7.1 60 77-142 11-76 (157)
10 3edo_A Flavoprotein, putative 10.1 3.4E+02 0.012 18.9 4.2 23 110-132 106-128 (151)
No 1
>2ew0_A Hypothetical protein aciad0353; Q5FF54, ASR1, NESG, structural genomics, PSI, protein struct initiative; 1.40A {Acinetobacter SP} SCOP: d.310.1.1
Probab=100.00 E-value=6e-52 Score=333.72 Aligned_cols=165 Identities=26% Similarity=0.432 Sum_probs=138.7
Q ss_pred CCCcccceEEEEeeeCCCCCCCCceEEEecccchhcccccCCCcccccccccCCceeecCcccCCe-EEEEeCCCCCCCc
Q 047846 3 GIRTFERTVVLLLRSGTRHPQEGPFGVVINRPLHKKIKHMKPTNHELATTFADCSLHFGGPLEASM-FLLKTGQSKLPGF 81 (181)
Q Consensus 3 ~d~~F~rSVVLi~~~~~eH~~~Ga~GlILNrp~~~~l~~~~~~~~~~~~~~~~~~v~~GGPV~~~~-~~lh~~~~~~~~~ 81 (181)
.|++|+||||||| +|+++||||||||||++.+++++++.+.-....+.+.|||+||||++++ |+||+....++++
T Consensus 18 ~d~~F~rSVIli~----eH~~~Ga~GlIlNrP~~~~l~~ll~~l~~~~~~~~~~~v~~GGPV~~~rgfvLH~~~~~~~~s 93 (192)
T 2ew0_A 18 ADDFFANTVIYLA----RHDEEGAQGIIINRPAGIQIKELLNDLDIDADNVNPHEVLQGGPLRPEAGFVLHTGQPTWHSS 93 (192)
T ss_dssp CCTTTTTCEEEEE----EEETTEEEEEECSCEEEEEHHHHHHHTTCCCTTCCCCEEEECCSEEEEEEEEEEESCCCSSSE
T ss_pred CCCCccceEEEEE----EeCCCceeEEEecCCCCCCHHHHHHhhCcccccCCCCeeEECCCcCCCcEEEEEeCCCCCCCc
Confidence 3899999999999 8999999999999999888888765432111112378999999999998 8999876667899
Q ss_pred eEeeCceEecccCCHHHHHHHHHcCCCCCCceEEEEeecCCCcchHHHHHhcCCeEEecCChhhhccccCCCChHHHHHH
Q 047846 82 EEVIPGLCFGARNSLDEAAALVKKGVLKPQDFRFFVGYAGWQLDQLREEIESDYWYVAACSSDLICGATSDTSSESLWEE 161 (181)
Q Consensus 82 ~~v~~gl~lg~~~~~~~~~~~v~~g~~~~~~~~~f~GyagW~pGQLe~Ei~~g~W~v~~a~~~~lf~~~~~~~~~~lW~~ 161 (181)
.+|.+|+|++++.|+.+++ .++ ..|+++|||+|||||+|||||+||++|+|++++|++++||+ .+.+++|++
T Consensus 94 ~~v~~gv~lt~s~d~l~~i---~~~-~~p~~~~~flGYaGW~~GQLe~Ei~~n~Wl~~~a~~~~lf~----~~~~~~W~~ 165 (192)
T 2ew0_A 94 IAVGENVCITTSKDILDAI---AHN-EGVGRYQIALGYASWGKNQLEDEIARGDWLICDADMDLIFN----LPYDDRWDA 165 (192)
T ss_dssp EEEETTEEEECSSHHHHHH---HTT-CSCCSEEEEEEEEEECTTHHHHHHHTTCCEEEECCHHHHTT----SCGGGHHHH
T ss_pred eEecCCeeeeCCHHHHHHH---hcC-CCCccEEEEEeecCCCHHHHHHHHHcCCEEEecCCHHHhhC----CCHHHHHHH
Confidence 9999999999877766554 355 57899999999999999999999999999999999999963 455999999
Q ss_pred HHHHcCCChhhhhcCCCC
Q 047846 162 ILQLMGGHYSELSRKPKQ 179 (181)
Q Consensus 162 ~l~~~G~~~~~ls~~p~~ 179 (181)
+|+++|++|+.||+.|+.
T Consensus 166 al~~lG~~~~~ls~~~~~ 183 (192)
T 2ew0_A 166 AYKKIGVDRTWLASEIGH 183 (192)
T ss_dssp HHHHGGGSSCCCCC----
T ss_pred HHHHhCCCHHHHHhhhhh
Confidence 999999999999999875
No 2
>2gzo_A UPF0301 protein SO3346; GFT-protein structure, nesgc, alpha-beta, structural genomics, PSI, protein structure initiative; NMR {Shewanella oneidensis} SCOP: d.310.1.1
Probab=100.00 E-value=1.5e-51 Score=332.12 Aligned_cols=166 Identities=25% Similarity=0.448 Sum_probs=141.7
Q ss_pred CCCcccceEEEEeeeCCCCCCCCceEEEecccchhcccccCCCccc-cc--c--cccCCceeecCcccCCe-EEEEeCCC
Q 047846 3 GIRTFERTVVLLLRSGTRHPQEGPFGVVINRPLHKKIKHMKPTNHE-LA--T--TFADCSLHFGGPLEASM-FLLKTGQS 76 (181)
Q Consensus 3 ~d~~F~rSVVLi~~~~~eH~~~Ga~GlILNrp~~~~l~~~~~~~~~-~~--~--~~~~~~v~~GGPV~~~~-~~lh~~~~ 76 (181)
.|++|+||||||| +|+++||||||||||++.+++++++.+.. .. . .+.++|||+||||++++ |+||+...
T Consensus 16 ~d~~F~rSVVli~----eH~~~Ga~GlIiNrP~~~~l~~ll~~l~~~~~~~~~~~~~~~~v~~GGPV~~~rgfvLH~~~~ 91 (195)
T 2gzo_A 16 DDTFFERTVIYLC----EHDEKGAMGLVINKPLGIEVNSLLEQMDLPTEQVSADLAMGSQVLMGGPVSQDRGFVLHTSQP 91 (195)
T ss_dssp CSCSSSSEEEEEC----CCBTTBCCEEECSSCCCBCHHHHHHHHTSCSSCCCCCCCCCSCBEESCSBTTTSCCEEEECCS
T ss_pred CCCCccccEEEEE----EeCCCceeEEEecCCCCCcHHHHHHhhCcccccccccccCCCeEEECCCcCCCcEEEEEeCCC
Confidence 3899999999999 89999999999999998888777543211 00 0 13578999999999998 99999766
Q ss_pred CCCCceEeeCceEecccCCHHHHHHHHHcCCCCCCceEEEEeecCCCcchHHHHHhcCCeEEecCChhhhccccCCCChH
Q 047846 77 KLPGFEEVIPGLCFGARNSLDEAAALVKKGVLKPQDFRFFVGYAGWQLDQLREEIESDYWYVAACSSDLICGATSDTSSE 156 (181)
Q Consensus 77 ~~~~~~~v~~gl~lg~~~~~~~~~~~v~~g~~~~~~~~~f~GyagW~pGQLe~Ei~~g~W~v~~a~~~~lf~~~~~~~~~ 156 (181)
.++++.+|.+|+|++++.|+.+++ .++ ..|+++|||+|||||+|||||+||++|+|++++|++++||+ .+.+
T Consensus 92 ~~~~s~~v~~gv~lt~s~dil~~i---~~~-~~p~~~~~flGYaGW~~GQLE~Ei~~n~Wl~~~a~~~~lf~----~~~~ 163 (195)
T 2gzo_A 92 YWANSTELGSGLMLTTSRDVLTAI---GSK-RSPDKFLVALGYAGWSKNQLEQELADNSWLTIPADHALLFD----INHE 163 (195)
T ss_dssp CSSSCCCSSSSEEEECTTHHHHHH---TSC-CCSSCEECEECBCTHHHHCCHHHHHHHTCEEEECCHHHHTT----SCSS
T ss_pred CCCCceEecCCeeeeCCHHHHHHH---hcC-CCCccEEEEEeecCCCHHHHHHHHHcCCEEEecCCHHHhcC----CCHH
Confidence 778999999999999877666544 355 57899999999999999999999999999999999999963 4459
Q ss_pred HHHHHHHHHcCCChhhhhcCCCCC
Q 047846 157 SLWEEILQLMGGHYSELSRKPKQD 180 (181)
Q Consensus 157 ~lW~~~l~~~G~~~~~ls~~p~~~ 180 (181)
++|+++|+++|++|+.||+.|+..
T Consensus 164 ~~W~~al~~lG~~~~~ls~~~~~~ 187 (195)
T 2gzo_A 164 DRWQQASRSLGFEAWQLSTQAGHA 187 (195)
T ss_dssp HHHHHHHHCCCCCCCCCCCCCCCC
T ss_pred HHHHHHHHHhCCCHHHHHhhhHHH
Confidence 999999999999999999998753
No 3
>2gs5_A Conserved hypothetical protein; corvnebacterium diphtheria, structural genomics, PSI; 1.50A {Corynebacterium diphtheriae nctc 13129ORGANISM_TAXID} SCOP: d.310.1.1 PDB: 2hrx_A
Probab=100.00 E-value=4e-50 Score=324.50 Aligned_cols=158 Identities=23% Similarity=0.371 Sum_probs=136.3
Q ss_pred CCCcccceEEEEeeeCCCCCCCCceEEEecccchhcccccCCCcccccccccCCceeecCcccCCe-EEEEeCCCCC---
Q 047846 3 GIRTFERTVVLLLRSGTRHPQEGPFGVVINRPLHKKIKHMKPTNHELATTFADCSLHFGGPLEASM-FLLKTGQSKL--- 78 (181)
Q Consensus 3 ~d~~F~rSVVLi~~~~~eH~~~Ga~GlILNrp~~~~l~~~~~~~~~~~~~~~~~~v~~GGPV~~~~-~~lh~~~~~~--- 78 (181)
.|++|+||||||| +|+++||||||||||++.+++++++.+... .+.+.|||+||||++++ |+||+....+
T Consensus 28 ~d~~F~rSVVli~----eH~~~Ga~GlIlNrp~~~~l~~ll~~~~~~--~~~~~~v~~GGPV~~~~gfvLH~~~~~~~~~ 101 (198)
T 2gs5_A 28 ESEDFARSVILII----EHSEYATFGVNLASRSDVAVFNVIPEWVPC--VTKPQALYIGGPLNQQSVVGVGVTAQGVDAA 101 (198)
T ss_dssp CCTTTTTCEEEEE----EECSSCEEEEESSCEEEEEGGGTCGGGGGG--CCSSCEEEECCSEEEEEEEEEEEECTTCCGG
T ss_pred CCCCccccEEEEE----EeCCCCeeEEEecCCCCCCHHHHHHhhccc--ccCCCeEEECCCccCCeEEEEEecCcccccc
Confidence 3899999999999 899999999999999999999988765422 23578999999999998 8999865455
Q ss_pred -CCceEeeCc----eEecccCCHHHHHHHHHcCCCCCCceEEEEeecCCCcchHHHHHhcCCeEEecCChhhhccccCCC
Q 047846 79 -PGFEEVIPG----LCFGARNSLDEAAALVKKGVLKPQDFRFFVGYAGWQLDQLREEIESDYWYVAACSSDLICGATSDT 153 (181)
Q Consensus 79 -~~~~~v~~g----l~lg~~~~~~~~~~~v~~g~~~~~~~~~f~GyagW~pGQLe~Ei~~g~W~v~~a~~~~lf~~~~~~ 153 (181)
.++.+|.+| +|+++ +.+.+.+++ +++|||+|||||+|||||+||++|+|++++|++++||+ .
T Consensus 102 ~~~s~~v~~g~~~~v~l~~--s~d~l~~~~-------~~~~~flGYaGW~~GQLe~Ei~~n~Wl~~~a~~~~lf~----~ 168 (198)
T 2gs5_A 102 RVDNLTRLANRLVMVNLGA--DPEEIKPLV-------SGMRLFAGHAEWAPGQLAQEIENGDWFVAPALPSDVTA----P 168 (198)
T ss_dssp GCTTEEEEETTEEEECTTS--CHHHHGGGE-------EEEEEEEEEEEECTTHHHHHHHTTSEEEEECCHHHHHC----C
T ss_pred CCCceEecCCCceeEEEcC--CHHHHHHHh-------hccEEEeeEcCCChHHHHHHHHcCCEEEecCCHHHhcC----C
Confidence 789999999 99997 454443321 78999999999999999999999999999999999973 4
Q ss_pred ChHHHHHHHHHHcCCChhhhhcCCCC
Q 047846 154 SSESLWEEILQLMGGHYSELSRKPKQ 179 (181)
Q Consensus 154 ~~~~lW~~~l~~~G~~~~~ls~~p~~ 179 (181)
+.+++|+++|+++|++|+.||++|+|
T Consensus 169 ~~~~~W~~al~~lG~~~~~ls~~p~d 194 (198)
T 2gs5_A 169 GSVDVWGDVMRRQPMPLPLYSTFPVN 194 (198)
T ss_dssp TTCCHHHHHHHTSSTTGGGGCCCCC-
T ss_pred CHHHHHHHHHHHcCCCHHHhcCCCCC
Confidence 44999999999999999999999976
No 4
>2haf_A Putative translation repressor; alpha/beta, X-RAY crystallography, structural genomics, PSI, protein structure initiative; 2.88A {Vibrio cholerae} SCOP: d.310.1.1 PDB: 2aj2_A
Probab=100.00 E-value=1.8e-50 Score=329.20 Aligned_cols=163 Identities=21% Similarity=0.415 Sum_probs=133.0
Q ss_pred CCCcccceEEEEeeeCCCCCCCCceEEEecccchhcccccCCCccc-cc--cc---ccCCceeecCcccCCe-EEEEeCC
Q 047846 3 GIRTFERTVVLLLRSGTRHPQEGPFGVVINRPLHKKIKHMKPTNHE-LA--TT---FADCSLHFGGPLEASM-FLLKTGQ 75 (181)
Q Consensus 3 ~d~~F~rSVVLi~~~~~eH~~~Ga~GlILNrp~~~~l~~~~~~~~~-~~--~~---~~~~~v~~GGPV~~~~-~~lh~~~ 75 (181)
.|++|+||||||| +|+++||||||||||++.+++++++.+.. .. .. +.+.|||+||||++++ |+||+..
T Consensus 30 ~D~~F~rSVVlic----eH~~~GamGlIiNrP~~~~l~~ll~~l~~~~~~~~~~~~~~~~~v~~GGPV~~~rgfvLH~~~ 105 (211)
T 2haf_A 30 KDPYFKRSVIYIC----EHNQDGAMGLMINAPIDITVGGMLKQVDIEPAYPQSHQENLKKPVFNGGPVSEDRGFILHRPR 105 (211)
T ss_dssp CSGGGTTCEEEEE----EEETTEEEEEESSCEEEEEHHHHHHHTTCCCSSCCCCCSGGGSEEEECCSEEEEEEEEEECCC
T ss_pred CCCCcCccEEEEE----EeCCCCeeEEEecCCCCCcHHHHHHhhccccccccccccccCCeEEECCCccCCcEEEEEecC
Confidence 3899999999999 89999999999999998888877653321 00 00 3477999999999998 8999876
Q ss_pred CCCCCceEeeCceEecccCCHHHHHHHHHcCCCCCCceEEEEeecCCCcchHHHHHhcCCeEEecCChhhhccccCCCCh
Q 047846 76 SKLPGFEEVIPGLCFGARNSLDEAAALVKKGVLKPQDFRFFVGYAGWQLDQLREEIESDYWYVAACSSDLICGATSDTSS 155 (181)
Q Consensus 76 ~~~~~~~~v~~gl~lg~~~~~~~~~~~v~~g~~~~~~~~~f~GyagW~pGQLe~Ei~~g~W~v~~a~~~~lf~~~~~~~~ 155 (181)
..++++.+|.+|+|++++.|+.+++ .++ ..|+++|||+|||||+|||||+||++|+|++++|++++|| +.+.
T Consensus 106 ~~~~~s~~v~~gv~lt~s~dil~~i---~~~-~~p~~~~~flGYaGW~~GQLE~Ei~~n~Wl~~~a~~~~lF----~~~~ 177 (211)
T 2haf_A 106 DHYESSMKMTDDIAVTTSKDILTVL---GTE-AEPEGYIVALGYSGWSAGQLEVELTENSWLTIEADPELIF----NTPV 177 (211)
T ss_dssp SCCSSEEECSSSCEEECSGGGGGGT---TST-TSCSSEEEEEEEEEEETTHHHHHHHTTSEEEEECCHHHHH----SSCG
T ss_pred CCCCCceEecCCeeecCCHHHHHHH---hcC-CCCccEEEEeeecCCCHHHHHHHHHcCCEEEecCCHHHhc----CCCH
Confidence 6778999999999999877765443 345 5789999999999999999999999999999999999997 3456
Q ss_pred HHHHHHHHHHcCCChhhhhcCC
Q 047846 156 ESLWEEILQLMGGHYSELSRKP 177 (181)
Q Consensus 156 ~~lW~~~l~~~G~~~~~ls~~p 177 (181)
+++|+++|+++|++|+.||+..
T Consensus 178 ~~~W~~al~~lG~d~~~ls~~~ 199 (211)
T 2haf_A 178 HEKWQKAIQKLGISPAQLSSDA 199 (211)
T ss_dssp GGHHHHHHHHTSCCC-------
T ss_pred HHHHHHHHHHhCCCHHHHhhhc
Confidence 9999999999999999999764
No 5
>2do8_A UPF0301 protein HD_1794; NESG, GFT structral genomics, HDR14, structural genomics, PSI, protein structure initiative; NMR {Haemophilus ducreyi} SCOP: d.310.1.1
Probab=100.00 E-value=1.2e-49 Score=319.47 Aligned_cols=157 Identities=20% Similarity=0.389 Sum_probs=132.8
Q ss_pred CCCcccceEEEEeeeCCCCCCCCceEEEecccchhcccccCCCccc-c---cccccCCceeecCcccCCe-EEEEe-CCC
Q 047846 3 GIRTFERTVVLLLRSGTRHPQEGPFGVVINRPLHKKIKHMKPTNHE-L---ATTFADCSLHFGGPLEASM-FLLKT-GQS 76 (181)
Q Consensus 3 ~d~~F~rSVVLi~~~~~eH~~~Ga~GlILNrp~~~~l~~~~~~~~~-~---~~~~~~~~v~~GGPV~~~~-~~lh~-~~~ 76 (181)
.|++|+||||||| +|+++||||||||||++.+++++++.+.. . ...+.+.|||+||||++++ |+||+ ...
T Consensus 17 ~d~~F~rSVVli~----eH~~~Ga~GlIlNrp~~~~l~~ll~~~~~~~~~~~~~~~~~~v~~GGPV~~~rgfvLH~~~~~ 92 (188)
T 2do8_A 17 DDEYFDRTVIYIC----EHNDNGTIGVIINTPTDLSVLELLTRMDFQMAKPRIYTQDQMVLNGGPVNQDRGFIVHSKTDH 92 (188)
T ss_dssp TTCCSSCCCCEEE----EEETTEEEEECSCCEEEEEHHHHHHHTTCCCCCCGGGCCCCEEEECCSEEEEEEEEEECCCTT
T ss_pred CCCCcCccEEEEE----EeCCCCceEEEEeCCCCCCHHHHHHhhcccccccccccCCCeEEECCCccCCcEEEEEeCCCC
Confidence 3899999999999 89999999999999998888877553321 0 0013578999999999998 89998 455
Q ss_pred CCCCceEeeCceEecccCCHHHHHHHHHcCCCCCCceEEEEeecCCCcchHHHHHhcCCeEEecCChhhhccccCCCChH
Q 047846 77 KLPGFEEVIPGLCFGARNSLDEAAALVKKGVLKPQDFRFFVGYAGWQLDQLREEIESDYWYVAACSSDLICGATSDTSSE 156 (181)
Q Consensus 77 ~~~~~~~v~~gl~lg~~~~~~~~~~~v~~g~~~~~~~~~f~GyagW~pGQLe~Ei~~g~W~v~~a~~~~lf~~~~~~~~~ 156 (181)
.++++.+|.+|+|++++.|+.+++ .++ ..|+++|||+|||||+|||||+||++|+|++++|++++||+ .+.+
T Consensus 93 ~~~~s~~v~~gv~lt~s~dil~~i---~~~-~~p~~~~~~lGYaGW~~GQLe~Ei~~n~Wl~~~a~~~~lf~----~~~~ 164 (188)
T 2do8_A 93 EFTHSYKVTDDITLTTSGDVLDSF---GTQ-TAPEKFIVCLGCSTWKPHQLEQEIAQNYWLLSEANNQTLFE----TSYL 164 (188)
T ss_dssp CCSSEEESSSSCEEECSSHHHHHT---TST-TCCSCEEEEEEEEEECTTHHHHHHHTTSSEEEECCTHHHHT----TTSS
T ss_pred CCCCcEEecCCeeecCCHHHHHHH---hcC-CCCccEEEEEeecCCCHHHHHHHHHcCCEEEecCCHHHhhC----CCHH
Confidence 678899999999999876665444 355 57899999999999999999999999999999999999973 4449
Q ss_pred HHHHHHHHHcCCChh
Q 047846 157 SLWEEILQLMGGHYS 171 (181)
Q Consensus 157 ~lW~~~l~~~G~~~~ 171 (181)
++|+++|+++|++|.
T Consensus 165 ~~W~~al~~lG~~~~ 179 (188)
T 2do8_A 165 DRWVEANEMLGISGI 179 (188)
T ss_dssp CCSSHHHHTTTSCCC
T ss_pred HHHHHHHHHcCCCCC
Confidence 999999999999998
No 6
>2do5_A Splicing factor 3B subunit 2; SAP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=17.86 E-value=45 Score=20.53 Aligned_cols=16 Identities=25% Similarity=0.844 Sum_probs=14.3
Q ss_pred eecCCCcchHHHHHhc
Q 047846 118 GYAGWQLDQLREEIES 133 (181)
Q Consensus 118 GyagW~pGQLe~Ei~~ 133 (181)
||-.|..+.|+.-+++
T Consensus 7 ~ygaW~~~ELQaKLaE 22 (58)
T 2do5_A 7 GYGAWAAQELQAKLAE 22 (58)
T ss_dssp CSCSSCHHHHHHHHHH
T ss_pred CcccccCHHHHHHHHH
Confidence 7999999999988875
No 7
>2z84_A UFSP1, UFM1-specific protease 1; alpha/beta, papain like fold, hydrolase, thiol protease, UBL conjugation pathway; 1.70A {Mus musculus}
Probab=13.10 E-value=2e+02 Score=22.72 Aligned_cols=68 Identities=19% Similarity=0.325 Sum_probs=38.1
Q ss_pred CCceeecCcccCC--eEEEEeCCCCCCCceEeeCceEecccCCHHHHHHHHHcCCCCCCceEEEEeecCCCcchHHHHHh
Q 047846 55 DCSLHFGGPLEAS--MFLLKTGQSKLPGFEEVIPGLCFGARNSLDEAAALVKKGVLKPQDFRFFVGYAGWQLDQLREEIE 132 (181)
Q Consensus 55 ~~~v~~GGPV~~~--~~~lh~~~~~~~~~~~v~~gl~lg~~~~~~~~~~~v~~g~~~~~~~~~f~GyagW~pGQLe~Ei~ 132 (181)
.-|||+||-+..- .++-......-+-..-|.|=-|-+...++..+++. ||++|.. ++++.+
T Consensus 137 g~PI~igG~~~ghS~tIvGve~~~~g~~~lLIlDPhy~~~~~~~~~i~~~---------------Gw~~Wk~--~~~~f~ 199 (218)
T 2z84_A 137 GGPVMVGGDADAQSKALLGICEGPGSEVYVLILDPHYWGTPKNRCELQAA---------------GWVGWQK--VKSVFD 199 (218)
T ss_dssp CCCEEECCTTTSCCEEEEEEEECTTCCEEEEEECCCCCSCCCCHHHHHHH---------------TSEEEEE--HHHHSC
T ss_pred CCCEEECCCcccccceEEeEEecCCCcEEEEEECCCcCCchHHHHHHHhC---------------Cceeeec--hhhhhc
Confidence 3599999998765 23333211111222334443355523466555431 8899986 367778
Q ss_pred cCCeEEe
Q 047846 133 SDYWYVA 139 (181)
Q Consensus 133 ~g~W~v~ 139 (181)
.++++-.
T Consensus 200 ~~~fYNl 206 (218)
T 2z84_A 200 SNSFYNL 206 (218)
T ss_dssp TTSCEEE
T ss_pred cccHHHh
Confidence 8887653
No 8
>1fmh_A General control protein GCN4; coiled coil, leucine zipper, inter-helical ION pairing, transcription; NMR {Synthetic} SCOP: k.6.1.1 PDB: 1u2u_A
Probab=12.15 E-value=76 Score=17.12 Aligned_cols=7 Identities=43% Similarity=0.738 Sum_probs=4.1
Q ss_pred hHHHHHh
Q 047846 126 QLREEIE 132 (181)
Q Consensus 126 QLe~Ei~ 132 (181)
|||.|++
T Consensus 19 qleqeva 25 (33)
T 1fmh_A 19 QLEQEVA 25 (33)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5666654
No 9
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=10.64 E-value=4.5e+02 Score=18.49 Aligned_cols=60 Identities=7% Similarity=0.050 Sum_probs=36.1
Q ss_pred CCCCceEeeCceEecccCCHHHHHHHHHcCCCCCCceEEEEeecCCCc--c--hHHHHHhc-C-CeEEecCC
Q 047846 77 KLPGFEEVIPGLCFGARNSLDEAAALVKKGVLKPQDFRFFVGYAGWQL--D--QLREEIES-D-YWYVAACS 142 (181)
Q Consensus 77 ~~~~~~~v~~gl~lg~~~~~~~~~~~v~~g~~~~~~~~~f~GyagW~p--G--QLe~Ei~~-g-~W~v~~a~ 142 (181)
.+.+..+|.++||+++......+..+.+.| +++.+-|..=.. . .+.+++++ | .++..+++
T Consensus 11 ~~~n~~~V~~~l~~s~~p~~a~a~~La~~G------a~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~D 76 (157)
T 3gxh_A 11 GIRALQQQAPQLLSSGLPNEQQFSLLKQAG------VDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVD 76 (157)
T ss_dssp TSTTCEEEETTEEEEBCCCHHHHHHHHHTT------CCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCC
T ss_pred cCcChheecCceeEcCCCCHHHHHHHHHcC------CCEEEECCCcccccccccHHHHHHHcCCeEEEecCC
Confidence 455677899999999877766666655444 455554442221 1 24556653 3 46666764
No 10
>3edo_A Flavoprotein, putative Trp repressor binding protein; YP_193882.1, flavoprotein in complex with FMN, structural genomics; HET: MSE FMN; 1.20A {Lactobacillus acidophilus ncfm}
Probab=10.15 E-value=3.4e+02 Score=18.93 Aligned_cols=23 Identities=13% Similarity=0.099 Sum_probs=16.5
Q ss_pred CCceEEEEeecCCCcchHHHHHh
Q 047846 110 PQDFRFFVGYAGWQLDQLREEIE 132 (181)
Q Consensus 110 ~~~~~~f~GyagW~pGQLe~Ei~ 132 (181)
....-.|+++.||+.|.=..+|+
T Consensus 106 ~~k~~~~~t~gg~~~g~~~~~l~ 128 (151)
T 3edo_A 106 RGEVASFFTSAGTNHKAYVSHFN 128 (151)
T ss_dssp CSEEEEEEECSSCCHHHHHHHHH
T ss_pred CCEEEEEEEeCCCCCCcHHHHHH
Confidence 35678888999999765555554
Done!