BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047848
(360 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LI74|CHUP1_ARATH Protein CHUP1, chloroplastic OS=Arabidopsis thaliana GN=CHUP1 PE=1
SV=1
Length = 1004
Score = 194 bits (493), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 111/263 (42%), Positives = 159/263 (60%), Gaps = 44/263 (16%)
Query: 133 VRRVPEVVELYRSLTRKDAHMENRSNTTAAPV---IAFTRNMIGEIENRSTYLSAIKTDV 189
V R PE+VE Y+SL ++++ E + ++ A NMIGEIENRST+L A+K DV
Sbjct: 718 VHRAPELVEFYQSLMKRESKKEGAPSLISSGTGNSSAARNNMIGEIENRSTFLLAVKADV 777
Query: 190 KKQKEFINFLIKEVESAVFDQISEVEAFVKWLDGELSSLVDERAVLKHFPQWPERKADTL 249
+ Q +F+ L EV ++ F I ++ AFV WLD ELS LVDERAVLKHF WPE KAD L
Sbjct: 778 ETQGDFVQSLATEVRASSFTDIEDLLAFVSWLDEELSFLVDERAVLKHF-DWPEGKADAL 836
Query: 250 REAACNYRDLKNLEQEVSSFEDNQKESLPQATRKMQALQDR--RACWSKGTGK-----KY 302
REAA Y+DL LE++V+SF D+ S A +KM L ++ ++ ++ + +Y
Sbjct: 837 REAAFEYQDLMKLEKQVTSFVDDPNLSCEPALKKMYKLLEKVEQSVYALLRTRDMAISRY 896
Query: 303 RDFQIPCDWMMDSGLIGQMKVSSLRLAKEYMKR--------------------------- 335
++F IP DW+ D+G++G++K+SS++LAK+YMKR
Sbjct: 897 KEFGIPVDWLSDTGVVGKIKLSSVQLAKKYMKRVAYELDSVSGSDKDPNREFLLLQGVRF 956
Query: 336 ------FAGGFDAETIQAFEELK 352
FAGGFDAE+++AFEEL+
Sbjct: 957 AFRVHQFAGGFDAESMKAFEELR 979
>sp|Q1PEB4|Y4498_ARATH Uncharacterized protein At4g04980 OS=Arabidopsis thaliana
GN=At4g04980 PE=2 SV=1
Length = 724
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 20/147 (13%)
Query: 133 VRRVPEVVELYRSLTRKDAHMENRS------------NTTA--APVIAFTRNM---IGEI 175
+RR ++ LY +L K +E R N+ A +PV M + E+
Sbjct: 434 LRRSAQIANLYWALKGK---LEGRGVEGKTKKASKGQNSVAEKSPVKVARSGMADALAEM 490
Query: 176 ENRSTYLSAIKTDVKKQKEFINFLIKEVESAVFDQISEVEAFVKWLDGELSSLVDERAVL 235
RS+Y I+ DV+K + I L + S + E+ F ++ L L DE VL
Sbjct: 491 TKRSSYFQQIEEDVQKYAKSIEELKSSIHSFQTKDMKELLEFHSKVESILEKLTDETQVL 550
Query: 236 KHFPQWPERKADTLREAACNYRDLKNL 262
F +PE+K + +R A Y+ L +
Sbjct: 551 ARFEGFPEKKLEVIRTAGALYKKLDGI 577
>sp|Q9NQ48|LZTL1_HUMAN Leucine zipper transcription factor-like protein 1 OS=Homo sapiens
GN=LZTFL1 PE=1 SV=1
Length = 299
Score = 33.1 bits (74), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 23 LLEKENFELRQEVLRLKAQISSLKAHDN---ERKSMLWKKLQNPNTDTSPQKQTDFVKTQ 79
LL KE L++E +LK+++ +++ + KS L K LQ+ D QK DF+K Q
Sbjct: 149 LLNKEILRLQEENEKLKSRLKTIEIQATNALDEKSKLEKALQDLQLDQGNQK--DFIKAQ 206
Query: 80 EFQNLDGETFRPRPGFQ 96
+ NL+ + FQ
Sbjct: 207 DLSNLENTVAALKSEFQ 223
>sp|Q9Z0W7|CLIC4_RAT Chloride intracellular channel protein 4 OS=Rattus norvegicus
GN=Clic4 PE=1 SV=3
Length = 253
Score = 33.1 bits (74), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 70/177 (39%), Gaps = 38/177 (21%)
Query: 146 LTRKDAHMENRSNTTAAPVIAFTRNMIGEIENRSTYLSAIKTDVKKQKEFINFLI----- 200
L RK AH++N + T P I F S +KTDV K +EF+ ++
Sbjct: 59 LKRKPAHLQNLAPGTHPPFITFN--------------SEVKTDVNKIEEFLEEVLCPPKY 104
Query: 201 -------KEVESAVFDQISEVEAFVKWLDGELSSLVDERAVLKHFPQWPERKADTLREAA 253
E +A D ++ A++K E + + ER +LK + E L
Sbjct: 105 LKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEAL-ERGLLKTLQKLDEYLNSPL-PGE 162
Query: 254 CNYRDLKNLEQEVSSFEDNQKESLPQATR--KMQALQDRRACWSKGTGKKYRDFQIP 308
+ +++++ F D + +L K+ + K KKYR+F IP
Sbjct: 163 IDENSMEDIKSSTRRFLDGDEMTLADCNLLPKLHIV--------KVVAKKYRNFDIP 211
>sp|Q4R6V9|LZTL1_MACFA Leucine zipper transcription factor-like protein 1 OS=Macaca
fascicularis GN=LZTFL1 PE=2 SV=2
Length = 299
Score = 33.1 bits (74), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 23 LLEKENFELRQEVLRLKAQISSLKAHDN---ERKSMLWKKLQNPNTDTSPQKQTDFVKTQ 79
LL KE L++E +LK+++ +++ + KS L K LQ+ D QK DF+K Q
Sbjct: 149 LLNKEILRLQEENEKLKSRLKTIEIQATSALDEKSKLEKALQDLQLDQGNQK--DFIKAQ 206
Query: 80 EFQNLDGETFRPRPGFQ 96
+ NL+ + FQ
Sbjct: 207 DLSNLENTVAALKSEFQ 223
>sp|Q5RBR4|LZTL1_PONAB Leucine zipper transcription factor-like protein 1 OS=Pongo abelii
GN=LZTFL1 PE=2 SV=1
Length = 299
Score = 32.7 bits (73), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 23 LLEKENFELRQEVLRLKAQISSLKAHDN---ERKSMLWKKLQNPNTDTSPQKQTDFVKTQ 79
LL KE L++E +LK+++ +++ + KS L K LQ+ D QK DF+K Q
Sbjct: 149 LLNKEILRLQEENEKLKSRLKTVEIQATNALDEKSKLEKALQDLQLDQGNQK--DFIKAQ 206
Query: 80 EFQNLDGETFRPRPGFQ 96
+ NL+ + FQ
Sbjct: 207 DLSNLENTVAALKSEFQ 223
>sp|B2JI34|ENGB_BURP8 Probable GTP-binding protein EngB OS=Burkholderia phymatum (strain
DSM 17167 / STM815) GN=engB PE=3 SV=1
Length = 220
Score = 32.3 bits (72), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 7/77 (9%)
Query: 282 RKMQALQDRRACWSKGTGKKYRDFQIPCDWMMDSGLIGQMKVSSLRLAKEYMKRF-AGGF 340
R + L R W TGK CD L Q V++LR K+ + + A G+
Sbjct: 123 RPLTELDRRMIEWFAPTGKPIHTLLTKCD-----KLTRQESVNALRATKKGLDEYRAAGY 177
Query: 341 DAE-TIQAFEELKKVGL 356
E T Q F LK++GL
Sbjct: 178 QGELTAQLFSALKRIGL 194
>sp|Q8WSR4|ITPR_ASTPE Inositol 1,4,5-trisphosphate receptor OS=Asterina pectinifera GN=IP3R
PE=1 SV=1
Length = 2698
Score = 32.3 bits (72), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 221 LDGELSSLVDERAVLKHFPQW----PERKADTLREAACNYRDLKNLEQEVSSFEDNQKES 276
LD ++++L + V+KH W P R D++ + +YR + Q++ S ++Q
Sbjct: 1535 LDSQVNTLFSKSIVMKHTRHWLAINPNRSRDSMVAISRDYRSIIEGLQDIVSLLEDQLRP 1594
Query: 277 LPQA 280
L QA
Sbjct: 1595 LVQA 1598
>sp|Q86YS3|RFIP4_HUMAN Rab11 family-interacting protein 4 OS=Homo sapiens GN=RAB11FIP4
PE=1 SV=1
Length = 637
Score = 32.0 bits (71), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Query: 18 DARIALLEKENFELRQEVLRLKAQISSLKAHDNERKSM 55
+AR+ LE+EN ELR V RLK+Q L D ER+ M
Sbjct: 423 NARVQQLEEENTELRTTVTRLKSQTEKL---DEERQRM 457
>sp|P37304|PAM1_YEAST Protein PAM1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PAM1 PE=1 SV=2
Length = 830
Score = 31.6 bits (70), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 10/64 (15%)
Query: 8 SRIDSFQKE---RDARI-------ALLEKENFELRQEVLRLKAQISSLKAHDNERKSMLW 57
+R+D Q +D +I + L+ E EL+ +VL LK ++SS KA++ + +L
Sbjct: 360 TRVDDLQNSIALKDGKIMQLQNSESTLKNEIKELQSQVLSLKQEVSSSKANNGQELEILK 419
Query: 58 KKLQ 61
KK+Q
Sbjct: 420 KKVQ 423
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.130 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 130,699,402
Number of Sequences: 539616
Number of extensions: 5528215
Number of successful extensions: 32324
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 169
Number of HSP's that attempted gapping in prelim test: 31973
Number of HSP's gapped (non-prelim): 476
length of query: 360
length of database: 191,569,459
effective HSP length: 119
effective length of query: 241
effective length of database: 127,355,155
effective search space: 30692592355
effective search space used: 30692592355
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)