Your job contains 1 sequence.
>047850
MAMEDHQIFHHDPSAFSSSSSPSLWPSFNNFPLQTNTQILPSSSRHIIQPSSSTLLFGDH
NNNNNNNNIIDQEEDEEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQ
SVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNIVG
DDHYNKLSLGATTNTTIATTTASASAAGALDPILGHSLPFHGNRNSSFYFNHHEVG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 047850
(236 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2144791 - symbol:HEC3 "AT5G09750" species:3702... 426 5.3e-40 1
TAIR|locus:2126856 - symbol:IND "AT4G00120" species:3702 ... 372 2.8e-34 1
TAIR|locus:2155543 - symbol:HEC1 "HECATE 1" species:3702 ... 365 1.5e-33 1
TAIR|locus:2074865 - symbol:HEC2 "AT3G50330" species:3702... 362 3.2e-33 1
UNIPROTKB|Q6Z9R3 - symbol:P0461F06.33 "BHLH protein famil... 355 1.8e-32 1
UNIPROTKB|Q67TR8 - symbol:B1342C04.6 "Basic helix-loop-he... 350 6.0e-32 1
TAIR|locus:2089418 - symbol:AT3G21330 "AT3G21330" species... 308 1.7e-27 1
UNIPROTKB|Q657D1 - symbol:P0697C12.40 "BHLH transcription... 299 3.6e-26 1
UNIPROTKB|Q8S0N2 - symbol:P0692C11.41-1 "BHLH transcripti... 285 4.6e-25 1
UNIPROTKB|Q5TKP7 - symbol:OJ1362_G11.11 "Putative unchara... 269 3.5e-23 1
UNIPROTKB|Q69TX2 - symbol:P0021C04.13 "BHLH protein-like"... 233 1.5e-19 1
UNIPROTKB|Q5MP56 - symbol:BA1 "Uncharacterized protein" s... 205 1.4e-16 1
TAIR|locus:2199221 - symbol:RSL4 "AT1G27740" species:3702... 194 2.0e-15 1
UNIPROTKB|Q6AV35 - symbol:OSJNBa0063J18.7 "Putative trans... 194 2.9e-15 1
UNIPROTKB|Q2R0R9 - symbol:LOC_Os11g41640 "Helix-loop-heli... 189 6.9e-15 1
TAIR|locus:2179122 - symbol:APTX "APRATAXIN-like" species... 201 7.1e-15 1
UNIPROTKB|Q2QMV9 - symbol:LOC_Os12g39850 "Helix-loop-heli... 190 7.5e-15 1
TAIR|locus:504954900 - symbol:AT5G43175 "AT5G43175" speci... 186 1.4e-14 1
UNIPROTKB|Q6ZFY4 - symbol:OJ1311_H06.19 "BHLH protein-lik... 186 1.9e-14 1
TAIR|locus:2118934 - symbol:RSL2 "AT4G33880" species:3702... 189 2.0e-14 1
TAIR|locus:2028957 - symbol:RHD6 "AT1G66470" species:3702... 183 4.4e-14 1
TAIR|locus:2156015 - symbol:RSL1 "AT5G37800" species:3702... 180 1.2e-13 1
UNIPROTKB|Q2QQ32 - symbol:LOC_Os12g32400 "Helix-loop-heli... 173 3.4e-13 1
UNIPROTKB|Q9ASJ3 - symbol:P0439B06.24 "Putative uncharact... 172 7.9e-13 1
TAIR|locus:2126624 - symbol:LRL2 "AT4G30980" species:3702... 171 1.3e-12 1
TAIR|locus:2132303 - symbol:UNE12 "AT4G02590" species:370... 170 1.7e-12 1
UNIPROTKB|Q651K2 - symbol:B1089G05.30 "BHLH protein-like"... 165 5.1e-12 1
TAIR|locus:2147760 - symbol:LRL3 "AT5G58010" species:3702... 165 5.3e-12 1
TAIR|locus:2007534 - symbol:AT1G03040 "AT1G03040" species... 165 5.7e-12 1
UNIPROTKB|Q69Y51 - symbol:P0698A06.26-2 "Putative bHLH tr... 168 6.0e-12 1
UNIPROTKB|Q8W5G3 - symbol:OSJNBa0002J24.23 "Helix-loop-he... 164 8.0e-12 1
TAIR|locus:2047555 - symbol:LRL1 "AT2G24260" species:3702... 165 9.1e-12 1
UNIPROTKB|Q7Y1H4 - symbol:OSJNBa0094F01.11 "Putative unch... 161 1.4e-11 1
UNIPROTKB|Q6Z7E7 - symbol:P0020C11.18 "Putative bHLH tran... 159 9.7e-11 1
TAIR|locus:2044762 - symbol:AT2G34820 "AT2G34820" species... 147 5.3e-10 1
UNIPROTKB|Q5NAE0 - symbol:P0498A12.33 "Putative BP-5 prot... 151 7.9e-10 1
TAIR|locus:2204569 - symbol:AT1G30670 "AT1G30670" species... 143 1.1e-09 1
TAIR|locus:2079676 - symbol:AT3G07340 "AT3G07340" species... 132 1.2e-09 2
TAIR|locus:2115080 - symbol:SPT "AT4G36930" species:3702 ... 130 1.6e-09 2
UNIPROTKB|Q6EPZ6 - symbol:P0014G10.34 "BHLH transcription... 147 1.8e-09 1
TAIR|locus:2155503 - symbol:ALC "AT5G67110" species:3702 ... 136 2.9e-09 1
TAIR|locus:2141573 - symbol:FBH2 "AT4G09180" species:3702... 138 3.9e-09 1
UNIPROTKB|Q84T08 - symbol:OSJNBa0087C10.10 "BHLH transcri... 138 4.1e-09 1
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 138 5.8e-09 1
UNIPROTKB|Q8S490 - symbol:rau1 "Transcription factor RAU1... 132 7.6e-09 1
UNIPROTKB|Q7FA23 - symbol:OSJNBa0058K23.6 "Os04g0618600 p... 131 9.7e-09 1
TAIR|locus:2059979 - symbol:FBH4 "AT2G42280" species:3702... 136 1.5e-08 1
TAIR|locus:2139484 - symbol:CIB1 "AT4G34530" species:3702... 134 2.1e-08 1
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 137 2.3e-08 1
TAIR|locus:2008693 - symbol:FBH1 "AT1G35460" species:3702... 131 2.4e-08 1
UNIPROTKB|Q8GRJ1 - symbol:OJ1343_B12.103 "Transcription f... 134 3.3e-08 1
TAIR|locus:2026037 - symbol:FBH3 "AT1G51140" species:3702... 133 3.5e-08 1
TAIR|locus:2115200 - symbol:BEE2 "AT4G36540" species:3702... 131 3.7e-08 1
UNIPROTKB|Q6K8Y4 - symbol:OJ1695_H09.18 "Basic helix-loop... 134 3.9e-08 1
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 131 4.0e-08 1
TAIR|locus:2039445 - symbol:AMS "AT2G16910" species:3702 ... 118 4.1e-08 2
UNIPROTKB|Q69WS3 - symbol:OJ1118_E12.15 "Putative bHLH pr... 129 4.4e-08 1
UNIPROTKB|Q7X7U7 - symbol:OSJNBb0091E11.4 "OJ990528_30.9 ... 124 5.3e-08 1
TAIR|locus:2202867 - symbol:BPEp "AT1G59640" species:3702... 130 6.2e-08 1
TAIR|locus:505006688 - symbol:AT5G50915 "AT5G50915" speci... 128 6.8e-08 1
UNIPROTKB|Q6Z2G7 - symbol:P0680A05.9 "Putative bHLH trans... 130 6.8e-08 1
UNIPROTKB|Q5N802 - symbol:P0004D12.24 "BHLH transcription... 132 6.9e-08 1
TAIR|locus:2115683 - symbol:AT4G05170 "AT4G05170" species... 127 9.6e-08 1
UNIPROTKB|Q6ZCV8 - symbol:P0028A08.20 "Os08g0487700 prote... 128 1.2e-07 1
TAIR|locus:2201906 - symbol:AT1G10120 "AT1G10120" species... 128 1.2e-07 1
TAIR|locus:2152551 - symbol:AT5G48560 "AT5G48560" species... 130 1.2e-07 1
UNIPROTKB|Q94LR3 - symbol:OSJNBa0010C11.7 "Helix-loop-hel... 120 1.4e-07 1
TAIR|locus:2095198 - symbol:AT3G23690 "AT3G23690" species... 127 1.5e-07 1
UNIPROTKB|Q69JJ6 - symbol:OSJNBa0026C08.22 "TA1 protein-l... 128 1.5e-07 1
UNIPROTKB|Q84QW1 - symbol:OJ1191_A10.109 "BHLH transcript... 127 1.8e-07 1
UNIPROTKB|Q75M33 - symbol:P0668H12.5 "BHLH transcription ... 125 2.1e-07 1
TAIR|locus:2061634 - symbol:PIL5 "phytochrome interacting... 127 2.4e-07 1
UNIPROTKB|Q84LH4 - symbol:OSJNBb0011H13.2 "Putative Helix... 124 2.5e-07 1
TAIR|locus:2053766 - symbol:AT2G42300 "AT2G42300" species... 124 2.5e-07 1
UNIPROTKB|Q5VR96 - symbol:P0038C05.31-1 "Os06g0275600 pro... 126 2.6e-07 1
TAIR|locus:2126876 - symbol:UNE10 "AT4G00050" species:370... 125 2.9e-07 1
TAIR|locus:2142419 - symbol:AT5G10570 "AT5G10570" species... 123 3.0e-07 1
UNIPROTKB|Q7XT55 - symbol:OSJNBa0084K20.3 "OSJNBa0076N16.... 119 3.0e-07 1
TAIR|locus:2014144 - symbol:BEE1 "BR enhanced expression ... 121 3.2e-07 1
TAIR|locus:2117788 - symbol:AT4G28800 species:3702 "Arabi... 125 3.5e-07 1
TAIR|locus:2090679 - symbol:AT3G19500 species:3702 "Arabi... 121 3.5e-07 1
TAIR|locus:2172209 - symbol:AT5G62610 "AT5G62610" species... 121 3.9e-07 1
TAIR|locus:2205420 - symbol:AT1G68920 species:3702 "Arabi... 125 4.0e-07 1
TAIR|locus:2027809 - symbol:BEE3 "AT1G73830" species:3702... 120 4.2e-07 1
UNIPROTKB|Q8GZV6 - symbol:OJ1017C11.10 "Putative uncharac... 127 4.6e-07 1
UNIPROTKB|Q75H21 - symbol:OSJNBa0027H16.21 "Putative unch... 122 5.7e-07 1
UNIPROTKB|Q75GI1 - symbol:OSJNBa0013A09.16 "Putative tran... 121 6.5e-07 1
TAIR|locus:2045263 - symbol:AT2G31730 species:3702 "Arabi... 112 1.0e-06 1
TAIR|locus:2117773 - symbol:AT4G28790 species:3702 "Arabi... 120 1.1e-06 1
TAIR|locus:2053733 - symbol:PIF4 "AT2G43010" species:3702... 120 1.1e-06 1
TAIR|locus:2041369 - symbol:PIL1 "phytochrome interacting... 119 1.4e-06 1
TAIR|locus:2032990 - symbol:CES "AT1G25330" species:3702 ... 117 1.7e-06 1
TAIR|locus:4010713915 - symbol:AT4G28811 species:3702 "Ar... 119 2.1e-06 1
TAIR|locus:2039094 - symbol:AIB "AT2G46510" species:3702 ... 119 2.2e-06 1
UNIPROTKB|Q6Z861 - symbol:P0572D06.2 "cDNA clone:002-118-... 117 2.5e-06 1
TAIR|locus:505006103 - symbol:AT1G05805 "AT1G05805" speci... 118 2.8e-06 1
UNIPROTKB|Q75KP4 - symbol:OSJNBa0065F09.5 "Expressed prot... 117 4.1e-06 1
TAIR|locus:2137574 - symbol:AT4G37850 "AT4G37850" species... 117 4.5e-06 1
TAIR|locus:2028804 - symbol:CIB5 "AT1G26260" species:3702... 117 6.1e-06 1
TAIR|locus:2077680 - symbol:PIL6 "AT3G59060" species:3702... 117 7.6e-06 1
WARNING: Descriptions of 44 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2144791 [details] [associations]
symbol:HEC3 "AT5G09750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB020752
EMBL:AL353994 GO:GO:0048462 GO:GO:0010500 IPI:IPI00522404
PIR:T49923 RefSeq:NP_196537.1 UniGene:At.65500
ProteinModelPortal:Q9LXD8 SMR:Q9LXD8 IntAct:Q9LXD8 STRING:Q9LXD8
EnsemblPlants:AT5G09750.1 GeneID:830835 KEGG:ath:AT5G09750
TAIR:At5g09750 eggNOG:NOG238444 HOGENOM:HOG000210013
InParanoid:Q9LXD8 OMA:NDPIGMA ProtClustDB:CLSN2916890
Genevestigator:Q9LXD8 Uniprot:Q9LXD8
Length = 224
Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 83/93 (89%), Positives = 90/93 (96%)
Query: 82 LGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRL 141
LGAMKEMMY+IAAMQ VDIDP T++KPKRRN+RISDDPQSVAARHRRE+ISE+IRILQRL
Sbjct: 92 LGAMKEMMYKIAAMQSVDIDPATVKKPKRRNVRISDDPQSVAARHRRERISERIRILQRL 151
Query: 142 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSN 174
VPGGTKMDTASMLDEAIRYVKFLKRQIRLL +N
Sbjct: 152 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLNNN 184
>TAIR|locus:2126856 [details] [associations]
symbol:IND "AT4G00120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010197 "polar nucleus fusion" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161471
GO:GO:0010197 EMBL:AF069299 EMBL:BT029443 EMBL:AF488578
IPI:IPI00532644 PIR:T01340 RefSeq:NP_191923.1 UniGene:At.34598
ProteinModelPortal:O81313 SMR:O81313 IntAct:O81313 STRING:O81313
PRIDE:O81313 EnsemblPlants:AT4G00120.1 GeneID:827911
KEGG:ath:AT4G00120 TAIR:At4g00120 eggNOG:NOG274244
HOGENOM:HOG000113070 InParanoid:O81313 OMA:DWNKAND PhylomeDB:O81313
ProtClustDB:CLSN2916160 Genevestigator:O81313 Uniprot:O81313
Length = 198
Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 71/91 (78%), Positives = 80/91 (87%)
Query: 82 LGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRL 141
+ AMKEM Y IA MQPVDIDP T+ KP RRN+RISDDPQ+V AR RRE+ISEKIRIL+R+
Sbjct: 85 MDAMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRERISEKIRILKRI 144
Query: 142 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
VPGG KMDTASMLDEAIRY KFLKRQ+R+LQ
Sbjct: 145 VPGGAKMDTASMLDEAIRYTKFLKRQVRILQ 175
>TAIR|locus:2155543 [details] [associations]
symbol:HEC1 "HECATE 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010500 "transmitting tissue
development" evidence=IGI] [GO:0048462 "carpel formation"
evidence=IMP] [GO:0048445 "carpel morphogenesis" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:AF488618 EMBL:AK228927 IPI:IPI00530790
RefSeq:NP_201507.1 UniGene:At.28829 ProteinModelPortal:Q9FHA7
SMR:Q9FHA7 IntAct:Q9FHA7 EnsemblPlants:AT5G67060.1 GeneID:836841
KEGG:ath:AT5G67060 TAIR:At5g67060 eggNOG:NOG267961
HOGENOM:HOG000242863 InParanoid:Q9FHA7 OMA:FLFNSTH PhylomeDB:Q9FHA7
ProtClustDB:CLSN2684406 Genevestigator:Q9FHA7 GO:GO:0048462
GO:GO:0010500 Uniprot:Q9FHA7
Length = 241
Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 70/99 (70%), Positives = 85/99 (85%)
Query: 82 LGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRL 141
+ AM+EM++RIA MQP+ IDP ++ PKRRN+RIS DPQSVAARHRRE+ISE+IRILQRL
Sbjct: 95 MAAMREMIFRIAVMQPIHIDPEAVKPPKRRNVRISKDPQSVAARHRRERISERIRILQRL 154
Query: 142 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNIVG 180
VPGGTKMDTASMLDEAI YVKFLK+Q++ L+ Q + G
Sbjct: 155 VPGGTKMDTASMLDEAIHYVKFLKKQVQSLEE-QAVVTG 192
>TAIR|locus:2074865 [details] [associations]
symbol:HEC2 "AT3G50330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] [GO:0080126 "ovary
septum development" evidence=IGI] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL132976
HOGENOM:HOG000242863 ProtClustDB:CLSN2684406 GO:GO:0048462
GO:GO:0010500 EMBL:BT010607 EMBL:AK175679 EMBL:AK175912
EMBL:AK176020 IPI:IPI00532987 PIR:T45579 RefSeq:NP_190602.1
UniGene:At.35505 ProteinModelPortal:Q9SND4 SMR:Q9SND4 IntAct:Q9SND4
EnsemblPlants:AT3G50330.1 GeneID:824195 KEGG:ath:AT3G50330
TAIR:At3g50330 eggNOG:NOG315110 InParanoid:Q9SND4 OMA:NANMAAM
PhylomeDB:Q9SND4 Genevestigator:Q9SND4 GO:GO:0080126 Uniprot:Q9SND4
Length = 231
Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 67/93 (72%), Positives = 84/93 (90%)
Query: 82 LGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRL 141
+ AM+EM++RIA MQP+ IDP +++ PKR+N+RIS DPQSVAARHRRE+ISE+IRILQRL
Sbjct: 92 MAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIRILQRL 151
Query: 142 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSN 174
VPGGTKMDTASMLDEAI YVKFLK+Q++ L+ +
Sbjct: 152 VPGGTKMDTASMLDEAIHYVKFLKKQVQSLEEH 184
>UNIPROTKB|Q6Z9R3 [details] [associations]
symbol:P0461F06.33 "BHLH protein family-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000145
eggNOG:NOG315110 EMBL:AP004693 EnsemblPlants:LOC_Os08g36740.1
OMA:SAMREMI Uniprot:Q6Z9R3
Length = 246
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 69/89 (77%), Positives = 81/89 (91%)
Query: 84 AMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVP 143
AM+EM++ IAA+QPV+IDP T+R PKRRN+RIS DPQSVAAR RRE+ISE+IRILQRLVP
Sbjct: 126 AMREMIFHIAALQPVNIDPETVRPPKRRNVRISTDPQSVAARMRRERISERIRILQRLVP 185
Query: 144 GGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
GGTKMDTASMLDEAI YVKFLK Q++ L+
Sbjct: 186 GGTKMDTASMLDEAIHYVKFLKTQVQSLE 214
>UNIPROTKB|Q67TR8 [details] [associations]
symbol:B1342C04.6 "Basic helix-loop-helix (BHLH)-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP005655 EMBL:AP006057
EMBL:AK060477 EMBL:AK070458 RefSeq:NP_001063357.1 UniGene:Os.51063
EnsemblPlants:LOC_Os09g28210.1 GeneID:4347252 KEGG:osa:4347252
OMA:AYPAFHA ProtClustDB:CLSN2697769 Uniprot:Q67TR8
Length = 236
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 68/89 (76%), Positives = 80/89 (89%)
Query: 84 AMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVP 143
AM+EM++ IAA+QPV+IDP +R PKRRN+RIS DPQSVAAR RRE+ISE+IRILQRLVP
Sbjct: 116 AMREMIFHIAALQPVEIDPEAVRPPKRRNVRISKDPQSVAARLRRERISERIRILQRLVP 175
Query: 144 GGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
GGTKMDTASMLDEAI YVKFLK Q++ L+
Sbjct: 176 GGTKMDTASMLDEAIHYVKFLKSQVQSLE 204
>TAIR|locus:2089418 [details] [associations]
symbol:AT3G21330 "AT3G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP001305 EMBL:AF488617 EMBL:BT004279 EMBL:BT020364
IPI:IPI00541948 RefSeq:NP_188770.1 UniGene:At.38078
ProteinModelPortal:Q8S3D2 SMR:Q8S3D2 EnsemblPlants:AT3G21330.1
GeneID:821687 KEGG:ath:AT3G21330 TAIR:At3g21330 eggNOG:NOG330001
HOGENOM:HOG000095219 InParanoid:Q9LIG3 OMA:LMARELC PhylomeDB:Q8S3D2
ProtClustDB:CLSN2685101 Genevestigator:Q8S3D2 Uniprot:Q8S3D2
Length = 373
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 58/92 (63%), Positives = 75/92 (81%)
Query: 82 LGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRL 141
+ MKEM+YR AA +PV+ + KPKR+N++IS DPQ+VAAR RRE+ISEKIR+LQ L
Sbjct: 242 IAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQTL 301
Query: 142 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
VPGGTKMDTASMLDEA Y+KFL+ Q++ L++
Sbjct: 302 VPGGTKMDTASMLDEAANYLKFLRAQVKALEN 333
>UNIPROTKB|Q657D1 [details] [associations]
symbol:P0697C12.40 "BHLH transcription-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003141
EMBL:AP003296 Uniprot:Q657D1
Length = 484
Score = 299 (110.3 bits), Expect = 3.6e-26, P = 3.6e-26
Identities = 59/93 (63%), Positives = 75/93 (80%)
Query: 82 LGAMKEMMYRIAAMQPVDIDPTTI-RKPKRRNIRISDDPQSVAARHRREKISEKIRILQR 140
L +KEM+YR AAM+PV + +P+RRN+RIS DPQ+VAAR RRE+ISE++R+LQ+
Sbjct: 336 LAQVKEMIYRAAAMRPVTLGAEDAGERPRRRNVRISSDPQTVAARQRRERISERLRVLQK 395
Query: 141 LVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
LVPGG KMDTASMLDEA Y++FLK QIR LQ+
Sbjct: 396 LVPGGAKMDTASMLDEAANYLRFLKSQIRELQT 428
>UNIPROTKB|Q8S0N2 [details] [associations]
symbol:P0692C11.41-1 "BHLH transcription factor-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:CM000138 EMBL:AP003381 EMBL:AP003273 EMBL:AK106119
RefSeq:NP_001044022.1 UniGene:Os.25546 GeneID:4327679
KEGG:osa:4327679 eggNOG:NOG254276 OMA:EPDMEAM
ProtClustDB:CLSN2919059 Uniprot:Q8S0N2
Length = 393
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 54/93 (58%), Positives = 75/93 (80%)
Query: 82 LGAMKEMMYRIAAMQPVDIDPTTIR-KPKRRNIRISDDPQSVAARHRREKISEKIRILQR 140
+ +KEM+YR AAM+PV + KP+R+N+RIS DPQ+VAAR RRE++S+++R+LQ+
Sbjct: 247 MAQVKEMIYRAAAMRPVHLGTEAAADKPRRKNVRISSDPQTVAARLRRERVSDRLRVLQK 306
Query: 141 LVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
LVPGG KMDTASMLDEA Y+KFLK Q++ L++
Sbjct: 307 LVPGGNKMDTASMLDEAASYLKFLKSQVQKLET 339
>UNIPROTKB|Q5TKP7 [details] [associations]
symbol:OJ1362_G11.11 "Putative uncharacterized protein
OJ1362_G11.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC104713 ProteinModelPortal:Q5TKP7
EnsemblPlants:LOC_Os05g46370.1 KEGG:dosa:Os05t0541400-00
Gramene:Q5TKP7 HOGENOM:HOG000238211 Uniprot:Q5TKP7
Length = 416
Score = 269 (99.8 bits), Expect = 3.5e-23, P = 3.5e-23
Identities = 55/104 (52%), Positives = 79/104 (75%)
Query: 82 LGAMKEMMYRIAAMQPVDI-------DPTTI-----RKPKRRNIRISDDPQSVAARHRRE 129
+ +KEM+YR A M+PV + DP++ ++P+R+N+RIS DPQ+VAAR RRE
Sbjct: 258 IAQVKEMVYRAAPMRPVTLGGPASASDPSSRPPPPPQRPRRKNVRISSDPQTVAARLRRE 317
Query: 130 KISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
++SE++R+LQRLVPGG+KMDTA+MLDEA Y+KFLK Q+ L++
Sbjct: 318 RVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEALET 361
>UNIPROTKB|Q69TX2 [details] [associations]
symbol:P0021C04.13 "BHLH protein-like" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP004687
ProteinModelPortal:Q69TX2 EnsemblPlants:LOC_Os06g10820.1
Gramene:Q69TX2 HOGENOM:HOG000241748 Uniprot:Q69TX2
Length = 211
Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 43/66 (65%), Positives = 58/66 (87%)
Query: 107 KPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKR 166
+P+RRN R+S +PQSVAAR RRE++S+++R LQRLVPGG ++DTASML+EAIRYVKFLK
Sbjct: 112 RPRRRNARVSSEPQSVAARLRRERVSQRMRALQRLVPGGARLDTASMLEEAIRYVKFLKG 171
Query: 167 QIRLLQ 172
++ L+
Sbjct: 172 HVQSLE 177
>UNIPROTKB|Q5MP56 [details] [associations]
symbol:BA1 "Uncharacterized protein" species:4577 "Zea
mays" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY683001 EMBL:AY683002
EMBL:BT062649 RefSeq:NP_001105271.1 UniGene:Zm.18382 IntAct:Q5MP56
GeneID:542186 KEGG:zma:542186 HOGENOM:HOG000238432 OMA:MLEQAIH
Uniprot:Q5MP56
Length = 219
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 40/65 (61%), Positives = 52/65 (80%)
Query: 109 KRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQI 168
+R ++S DPQSVAAR RR +IS++ R+L+ LVPGG+KMDT SML++AI YVKFLK QI
Sbjct: 46 RRPGAKLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKTQI 105
Query: 169 RLLQS 173
L Q+
Sbjct: 106 SLHQA 110
>TAIR|locus:2199221 [details] [associations]
symbol:RSL4 "AT1G27740" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0048766 "root hair
initiation" evidence=IMP] [GO:0048765 "root hair cell
differentiation" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0009733
GO:GO:0003677 GO:GO:0016049 GO:GO:0003700 GO:GO:0006351
EMBL:AC012375 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY085436
IPI:IPI00523669 PIR:B86402 RefSeq:NP_564293.1 UniGene:At.41015
ProteinModelPortal:Q8LEG1 SMR:Q8LEG1 EnsemblPlants:AT1G27740.1
GeneID:839667 KEGG:ath:AT1G27740 TAIR:At1g27740 eggNOG:NOG244031
HOGENOM:HOG000240244 InParanoid:Q8LEG1 OMA:DESNTNW PhylomeDB:Q8LEG1
ProtClustDB:CLSN2688032 Genevestigator:Q8LEG1 GO:GO:0048766
Uniprot:Q8LEG1
Length = 258
Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 40/87 (45%), Positives = 59/87 (67%)
Query: 103 TTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVK 162
T+++ R + DPQS+ AR RREKI+E+++ LQ LVP GTK+D ++ML+EA+ YVK
Sbjct: 161 TSVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVK 220
Query: 163 FLKRQIRLLQSNQCNIVGDDHYNKLSL 189
FL+ QI+LL S+ + YN L +
Sbjct: 221 FLQLQIKLLSSDDLWMYAPLAYNGLDM 247
>UNIPROTKB|Q6AV35 [details] [associations]
symbol:OSJNBa0063J18.7 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140
EMBL:AC107206 RefSeq:NP_001050667.1 UniGene:Os.79759
EnsemblPlants:LOC_Os03g42100.1 GeneID:4333457 KEGG:osa:4333457
eggNOG:NOG300710 OMA:CTSENDS ProtClustDB:CLSN2694086 Uniprot:Q6AV35
Length = 310
Score = 194 (73.4 bits), Expect = 2.9e-15, P = 2.9e-15
Identities = 38/76 (50%), Positives = 58/76 (76%)
Query: 114 RISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
R + DPQS+ AR RRE+I+E+++ILQ LVP GTK+D ++ML+EA+ YVKFL+ QI+LL S
Sbjct: 226 RSATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAMHYVKFLQLQIKLLSS 285
Query: 174 NQCNIVGDDHYNKLSL 189
++ + YN +++
Sbjct: 286 DEMWMYAPIAYNGMNI 301
>UNIPROTKB|Q2R0R9 [details] [associations]
symbol:LOC_Os11g41640 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240244 KEGG:dosa:Os11t0634700-00 Gramene:Q2R0R9
OMA:SLYAKRR Uniprot:Q2R0R9
Length = 246
Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 38/80 (47%), Positives = 60/80 (75%)
Query: 110 RRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIR 169
R + + S D QS+ A+ RRE+I+E++RILQ+LVP GTK+D ++ML+EA++YVKFL+ QI+
Sbjct: 156 RGHKQCSKDTQSLYAKRRRERINERLRILQQLVPNGTKVDISTMLEEAVQYVKFLQLQIK 215
Query: 170 LLQSNQCNIVGDDHYNKLSL 189
LL S+ + YN +++
Sbjct: 216 LLSSDDTWMFAPLAYNGMNM 235
>TAIR|locus:2179122 [details] [associations]
symbol:APTX "APRATAXIN-like" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0006790 "sulfur compound metabolic
process" evidence=IDA] [GO:0009150 "purine ribonucleotide metabolic
process" evidence=IDA] [GO:0047627 "adenylylsulfatase activity"
evidence=IDA] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0006310 "DNA
recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR011146
InterPro:IPR011598 InterPro:IPR015880 Pfam:PF00010 PROSITE:PS00028
PROSITE:PS50157 PROSITE:PS50888 PROSITE:PS51084 SMART:SM00353
SMART:SM00355 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0006260
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 Gene3D:3.30.428.10 InterPro:IPR001310
SUPFAM:SSF54197 PROSITE:PS00892 InterPro:IPR019808 eggNOG:NOG278510
KO:K10863 PANTHER:PTHR12486 GO:GO:0006790 EMBL:AL161746
IPI:IPI00539681 PIR:T48153 RefSeq:NP_195751.1 UniGene:At.54671
ProteinModelPortal:Q9M041 SMR:Q9M041 PRIDE:Q9M041
EnsemblPlants:AT5G01310.1 GeneID:830940 KEGG:ath:AT5G01310
GeneFarm:3073 TAIR:At5g01310 HOGENOM:HOG000083464 InParanoid:Q9M041
OMA:GHEGNLQ PhylomeDB:Q9M041 ProtClustDB:CLSN2687115
BioCyc:ARA:AT5G01310-MONOMER Genevestigator:Q9M041 GO:GO:0047627
GO:GO:0009150 InterPro:IPR002589 Pfam:PF01661 PROSITE:PS51154
Uniprot:Q9M041
Length = 912
Score = 201 (75.8 bits), Expect = 7.1e-15, P = 7.1e-15
Identities = 41/62 (66%), Positives = 47/62 (75%)
Query: 107 KPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKR 166
K R +S DPQSVAAR RR +IS++ +ILQ +VPGG KMDT SMLDEAI YVKFLK
Sbjct: 35 KRSRSTSTLSTDPQSVAARDRRHRISDRFKILQSMVPGGAKMDTVSMLDEAISYVKFLKA 94
Query: 167 QI 168
QI
Sbjct: 95 QI 96
>UNIPROTKB|Q2QMV9 [details] [associations]
symbol:LOC_Os12g39850 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 EMBL:CM000149
KEGG:dosa:Os12t0589000-00 OMA:DESEMMA Uniprot:Q2QMV9
Length = 304
Score = 190 (71.9 bits), Expect = 7.5e-15, P = 7.5e-15
Identities = 41/90 (45%), Positives = 61/90 (67%)
Query: 101 DPTTIRKPKRRNIR-ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIR 159
D K K R R + DPQS+ AR RRE+I+E+++ LQ LVP GTK+D ++ML+EA+
Sbjct: 207 DAGATSKGKSRAGRGAATDPQSLYARKRRERINERLKTLQNLVPNGTKVDISTMLEEAVH 266
Query: 160 YVKFLKRQIRLLQSNQCNIVGDDHYNKLSL 189
YVKFL+ QI+LL S++ + YN +++
Sbjct: 267 YVKFLQLQIKLLSSDEMWMYAPIAYNGMNI 296
>TAIR|locus:504954900 [details] [associations]
symbol:AT5G43175 "AT5G43175" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB008267 HOGENOM:HOG000240244 ProtClustDB:CLSN2688032
IPI:IPI00519888 RefSeq:NP_680385.1 UniGene:At.55333
ProteinModelPortal:Q3E7L7 SMR:Q3E7L7 EnsemblPlants:AT5G43175.1
GeneID:834335 KEGG:ath:AT5G43175 TAIR:At5g43175 eggNOG:NOG323547
InParanoid:Q3E7L7 OMA:MENEAFV PhylomeDB:Q3E7L7
Genevestigator:Q3E7L7 Uniprot:Q3E7L7
Length = 223
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 36/86 (41%), Positives = 61/86 (70%)
Query: 104 TIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKF 163
++++ + N I+ DPQS+ AR RRE+I+++++ LQ LVP GTK+D ++ML++A+ YVKF
Sbjct: 127 SLKRKAKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKF 186
Query: 164 LKRQIRLLQSNQCNIVGDDHYNKLSL 189
L+ QI+LL S + +N L++
Sbjct: 187 LQLQIKLLSSEDLWMYAPLAHNGLNM 212
>UNIPROTKB|Q6ZFY4 [details] [associations]
symbol:OJ1311_H06.19 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003983
EMBL:AP004161 Uniprot:Q6ZFY4
Length = 298
Score = 186 (70.5 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 34/58 (58%), Positives = 51/58 (87%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
DPQS+AA++RRE+ISE++RILQ LVP GTK+D +ML++AI YVKFL+ Q+++L +++
Sbjct: 206 DPQSLAAKNRRERISERLRILQELVPNGTKVDLVTMLEKAISYVKFLQLQVKVLATDE 263
>TAIR|locus:2118934 [details] [associations]
symbol:RSL2 "AT4G33880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0048766 "root hair initiation"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009733 GO:GO:0003677 GO:GO:0016049 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL031032
EMBL:AL161584 HOGENOM:HOG000240244 GO:GO:0048766 EMBL:AF488616
EMBL:BT003137 EMBL:AK228110 IPI:IPI00526320 PIR:T05216
RefSeq:NP_195114.2 UniGene:At.31542 ProteinModelPortal:Q84WK0
SMR:Q84WK0 EnsemblPlants:AT4G33880.1 GeneID:829531
KEGG:ath:AT4G33880 TAIR:At4g33880 eggNOG:NOG318365
InParanoid:Q84WK0 OMA:TINTNSY PhylomeDB:Q84WK0
ProtClustDB:CLSN2680247 Genevestigator:Q84WK0 Uniprot:Q84WK0
Length = 352
Score = 189 (71.6 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 36/57 (63%), Positives = 49/57 (85%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSN 174
DPQS+ AR RRE+I+E++RILQ LVP GTK+D ++ML+EA+ YVKFL+ QI+LL S+
Sbjct: 275 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSD 331
>TAIR|locus:2028957 [details] [associations]
symbol:RHD6 "AT1G66470" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0048766 "root
hair initiation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048766 EMBL:AC074025
EMBL:AY128310 EMBL:BT006320 EMBL:AF488615 IPI:IPI00529158
PIR:C96690 RefSeq:NP_176820.1 UniGene:At.35765
ProteinModelPortal:Q9C707 SMR:Q9C707 IntAct:Q9C707
EnsemblPlants:AT1G66470.1 GeneID:842965 KEGG:ath:AT1G66470
TAIR:At1g66470 eggNOG:NOG301765 HOGENOM:HOG000006063
InParanoid:Q9C707 OMA:HESFPPP PhylomeDB:Q9C707
ProtClustDB:CLSN2681768 Genevestigator:Q9C707 Uniprot:Q9C707
Length = 298
Score = 183 (69.5 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 35/69 (50%), Positives = 54/69 (78%)
Query: 107 KPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKR 166
K K + DPQS+AA++RRE+ISE+++ILQ LVP GTK+D +ML++AI YVKFL+
Sbjct: 193 KTKPKPTTSPKDPQSLAAKNRRERISERLKILQELVPNGTKVDLVTMLEKAISYVKFLQV 252
Query: 167 QIRLLQSNQ 175
Q+++L +++
Sbjct: 253 QVKVLATDE 261
>TAIR|locus:2156015 [details] [associations]
symbol:RSL1 "AT5G37800" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000006063 ProtClustDB:CLSN2681768 EMBL:AB016873
IPI:IPI00523734 RefSeq:NP_198596.1 UniGene:At.55195
ProteinModelPortal:Q9FJ00 SMR:Q9FJ00 EnsemblPlants:AT5G37800.1
GeneID:833758 KEGG:ath:AT5G37800 TAIR:At5g37800 eggNOG:NOG303056
InParanoid:Q9FJ00 OMA:MDFNASS PhylomeDB:Q9FJ00
Genevestigator:Q9FJ00 Uniprot:Q9FJ00
Length = 307
Score = 180 (68.4 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 32/58 (55%), Positives = 51/58 (87%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
DPQS+AA++RRE+ISE++++LQ LVP GTK+D +ML++AI YVKFL+ Q+++L +++
Sbjct: 210 DPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFLQVQVKVLAADE 267
>UNIPROTKB|Q2QQ32 [details] [associations]
symbol:LOC_Os12g32400 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 EMBL:CM000149
eggNOG:NOG284967 Uniprot:Q2QQ32
Length = 198
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 32/60 (53%), Positives = 50/60 (83%)
Query: 116 SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
++ QS A++RR++I+E++RILQ L+P GTK+D ++ML+EAI+YVKFL QI+LL S++
Sbjct: 115 AESSQSYYAKNRRQRINERLRILQELIPNGTKVDISTMLEEAIQYVKFLHLQIKLLSSDE 174
>UNIPROTKB|Q9ASJ3 [details] [associations]
symbol:P0439B06.24 "Putative uncharacterized protein
P0439B06.24" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP002882 UniGene:Os.30617
ProteinModelPortal:Q9ASJ3 Gramene:Q9ASJ3 OMA:KAITYVK
ProtClustDB:CLSN2918925 Uniprot:Q9ASJ3
Length = 294
Score = 172 (65.6 bits), Expect = 7.9e-13, P = 7.9e-13
Identities = 31/59 (52%), Positives = 49/59 (83%)
Query: 117 DDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
+ PQS AA+ RRE+ISE++++LQ LVP GTK+D +ML++AI YVKFL+ Q+++L +++
Sbjct: 206 EQPQSAAAKVRRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQLQVKVLATDE 264
>TAIR|locus:2126624 [details] [associations]
symbol:LRL2 "AT4G30980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL022198
EMBL:AL161578 HOGENOM:HOG000239571 GO:GO:0080147
ProtClustDB:CLSN2683027 EMBL:AF488601 IPI:IPI00524968 PIR:G85362
RefSeq:NP_194827.2 UniGene:At.31786 ProteinModelPortal:Q8S3D5
SMR:Q8S3D5 EnsemblPlants:AT4G30980.1 GeneID:829223
KEGG:ath:AT4G30980 TAIR:At4g30980 eggNOG:NOG295725
InParanoid:O65552 OMA:GGSHENT PhylomeDB:Q8S3D5
Genevestigator:Q8S3D5 Uniprot:Q8S3D5
Length = 310
Score = 171 (65.3 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 37/70 (52%), Positives = 50/70 (71%)
Query: 107 KPKRRNIR-ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
KPK R R + DP S+A R RRE+I+E+++ LQ LVP G K D ASMLDE I YVKFL+
Sbjct: 127 KPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQ 186
Query: 166 RQIRLLQSNQ 175
Q+++L ++
Sbjct: 187 LQVKVLSMSR 196
>TAIR|locus:2132303 [details] [associations]
symbol:UNE12 "AT4G02590" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009567 "double fertilization forming a zygote and endosperm"
evidence=IMP] [GO:0031347 "regulation of defense response"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0007275 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000239571
ProtClustDB:CLSN2687635 EMBL:AC002330 EMBL:AL161494 GO:GO:0031347
GO:GO:0009567 EMBL:AF488592 EMBL:AF367328 EMBL:AY143951
EMBL:AY088218 IPI:IPI00545077 IPI:IPI00892352 PIR:T01090
RefSeq:NP_001031577.1 RefSeq:NP_001118919.1 RefSeq:NP_567245.1
UniGene:At.20028 ProteinModelPortal:O22768 SMR:O22768 IntAct:O22768
PaxDb:O22768 PRIDE:O22768 EnsemblPlants:AT4G02590.1
EnsemblPlants:AT4G02590.2 GeneID:828126 KEGG:ath:AT4G02590
TAIR:At4g02590 eggNOG:euNOG02041 InParanoid:O22768 OMA:PAWEKWS
PhylomeDB:O22768 Genevestigator:O22768 Uniprot:O22768
Length = 310
Score = 170 (64.9 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 40/100 (40%), Positives = 58/100 (58%)
Query: 84 AMKEMMYRIAAMQP---VDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQR 140
+MK + + QP PT+IR R + DP S+A R RRE+I+E+IR LQ
Sbjct: 118 SMKPVFHGQPMQQPPPSAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQE 177
Query: 141 LVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNIVG 180
LVP K D A+M+DE + YVKFL+ Q+++L ++ G
Sbjct: 178 LVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAG 217
>UNIPROTKB|Q651K2 [details] [associations]
symbol:B1089G05.30 "BHLH protein-like" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CM000143 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005967 EnsemblPlants:LOC_Os06g30090.1 Uniprot:Q651K2
Length = 294
Score = 165 (63.1 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 34/84 (40%), Positives = 55/84 (65%)
Query: 91 RIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDT 150
R A P + + + + ++ + + QS AA+ RRE+ISE++R LQ LVP G K+D
Sbjct: 171 RRARPPPSPLQGSELHEYSKKQRANNKETQSSAAKSRRERISERLRALQELVPSGGKVDM 230
Query: 151 ASMLDEAIRYVKFLKRQIRLLQSN 174
+MLD AI YVKF++ Q+R+L+++
Sbjct: 231 VTMLDRAISYVKFMQMQLRVLETD 254
>TAIR|locus:2147760 [details] [associations]
symbol:LRL3 "AT5G58010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0080147 "root hair cell development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 HOGENOM:HOG000239571 GO:GO:0080147
EMBL:AB026635 EMBL:AF488614 IPI:IPI00540554 RefSeq:NP_200609.1
UniGene:At.29300 ProteinModelPortal:Q9LSQ3 SMR:Q9LSQ3 PRIDE:Q9LSQ3
EnsemblPlants:AT5G58010.1 GeneID:835913 KEGG:ath:AT5G58010
TAIR:At5g58010 eggNOG:NOG252939 InParanoid:Q9LSQ3 OMA:TEQRVAK
PhylomeDB:Q9LSQ3 ProtClustDB:CLSN2916934 Genevestigator:Q9LSQ3
Uniprot:Q9LSQ3
Length = 297
Score = 165 (63.1 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 36/80 (45%), Positives = 52/80 (65%)
Query: 102 PTTIRKPKRRNIR-ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRY 160
P +KP+ R R + DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE I Y
Sbjct: 91 PVVRQKPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEY 150
Query: 161 VKFLKRQIRLLQSNQCNIVG 180
V+FL+ Q+++L ++ G
Sbjct: 151 VRFLQLQVKVLSMSRLGGAG 170
>TAIR|locus:2007534 [details] [associations]
symbol:AT1G03040 "AT1G03040" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF251692
EMBL:AC006550 EMBL:AY054469 EMBL:AY114633 IPI:IPI00529284
PIR:B86161 RefSeq:NP_001184895.1 RefSeq:NP_563672.1
UniGene:At.20497 ProteinModelPortal:Q93Y00 SMR:Q93Y00 IntAct:Q93Y00
PaxDb:Q93Y00 PRIDE:Q93Y00 EnsemblPlants:AT1G03040.1 GeneID:839446
KEGG:ath:AT1G03040 TAIR:At1g03040 eggNOG:NOG281566
HOGENOM:HOG000239571 InParanoid:Q93Y00 OMA:SIVKPEM PhylomeDB:Q93Y00
ProtClustDB:CLSN2687635 Genevestigator:Q93Y00 Uniprot:Q93Y00
Length = 302
Score = 165 (63.1 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 40/100 (40%), Positives = 58/100 (58%)
Query: 84 AMKEMMYRIAAMQPVDIDP---TTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQR 140
+MK + + QP P +TIR R + DP S+A R RRE+I+E+IR LQ
Sbjct: 116 SMKPIFHGQPMSQPAPPMPHQQSTIRPRVRARRGQATDPHSIAERLRRERIAERIRSLQE 175
Query: 141 LVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNIVG 180
LVP K D A+M+DE + YVKFL+ Q+++L ++ G
Sbjct: 176 LVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAG 215
>UNIPROTKB|Q69Y51 [details] [associations]
symbol:P0698A06.26-2 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP003514
ProteinModelPortal:Q69Y51 EnsemblPlants:LOC_Os06g09370.3
Gramene:Q69Y51 HOGENOM:HOG000241730 Uniprot:Q69Y51
Length = 401
Score = 168 (64.2 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 38/75 (50%), Positives = 50/75 (66%)
Query: 107 KPKRRNIR-ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
KP+ R R + DP S+A R RREKISE+++ LQ LVP K D ASMLDE I YVKFL+
Sbjct: 236 KPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQ 295
Query: 166 RQIRLLQSNQCNIVG 180
Q+++L ++ G
Sbjct: 296 LQVKVLSMSRLGAPG 310
>UNIPROTKB|Q8W5G3 [details] [associations]
symbol:OSJNBa0002J24.23 "Helix-loop-helix DNA-binding
domain containing protein, expressed" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CM000140 HOGENOM:HOG000240244 EMBL:AC090713
EnsemblPlants:LOC_Os03g55550.1 eggNOG:NOG237829 OMA:WIWERRR
Uniprot:Q8W5G3
Length = 310
Score = 164 (62.8 bits), Expect = 8.0e-12, P = 8.0e-12
Identities = 34/63 (53%), Positives = 49/63 (77%)
Query: 108 PKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQ 167
P RR R + QS+ AR RRE+I+ ++RILQ+LVP GTK+D ++ML+EA+ YVKFL+ Q
Sbjct: 211 PARR--RSATIAQSLYARRRRERINGRLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQ 268
Query: 168 IRL 170
I++
Sbjct: 269 IKV 271
>TAIR|locus:2047555 [details] [associations]
symbol:LRL1 "AT2G24260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005967
HOGENOM:HOG000239571 GO:GO:0080147 EMBL:AF488599 EMBL:AK176370
EMBL:AK176390 EMBL:BT026512 IPI:IPI00528969 PIR:E84634
RefSeq:NP_180003.1 UniGene:At.20792 ProteinModelPortal:Q9ZUG9
SMR:Q9ZUG9 EnsemblPlants:AT2G24260.1 GeneID:816961
KEGG:ath:AT2G24260 TAIR:At2g24260 eggNOG:NOG284260
InParanoid:Q9ZUG9 OMA:STATCHS PhylomeDB:Q9ZUG9
ProtClustDB:CLSN2683027 Genevestigator:Q9ZUG9 Uniprot:Q9ZUG9
Length = 350
Score = 165 (63.1 bits), Expect = 9.1e-12, P = 9.1e-12
Identities = 32/58 (55%), Positives = 44/58 (75%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
DP S+A R RRE+I+E+++ LQ LVP G K D ASMLDE I YVKFL+ Q+++L ++
Sbjct: 147 DPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSR 204
>UNIPROTKB|Q7Y1H4 [details] [associations]
symbol:OSJNBa0094F01.11 "Putative uncharacterized protein
OSJNBa0094F01.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0009567
EMBL:AC093713 EMBL:AK104412 RefSeq:NP_001051563.1 UniGene:Os.27522
EnsemblPlants:LOC_Os03g58330.1 GeneID:4334429 KEGG:osa:4334429
OMA:TDGTERQ ProtClustDB:CLSN2694399 Uniprot:Q7Y1H4
Length = 294
Score = 161 (61.7 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 35/75 (46%), Positives = 50/75 (66%)
Query: 107 KPKRRNIR-ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
+PK R R + DP S+A R RRE+I+E++R LQ LVP K D A+MLDE + YVKFL+
Sbjct: 130 RPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 189
Query: 166 RQIRLLQSNQCNIVG 180
Q+++L ++ G
Sbjct: 190 LQVKVLSMSRLGGAG 204
>UNIPROTKB|Q6Z7E7 [details] [associations]
symbol:P0020C11.18 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:CM000139
EMBL:AP004865 EMBL:AK241924 EnsemblPlants:LOC_Os02g35660.1
OMA:TTAMQYL Uniprot:Q6Z7E7
Length = 524
Score = 159 (61.0 bits), Expect = 9.7e-11, P = 9.7e-11
Identities = 35/70 (50%), Positives = 49/70 (70%)
Query: 107 KPKRRNIR-ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
KP+ R R + DP S+A R RREKIS++++ LQ LVP K + ASMLDE I YVKFL+
Sbjct: 311 KPRVRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNKTNKASMLDEIIDYVKFLQ 370
Query: 166 RQIRLLQSNQ 175
Q+++L ++
Sbjct: 371 LQVKVLSMSR 380
>TAIR|locus:2044762 [details] [associations]
symbol:AT2G34820 "AT2G34820" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC004238 HOGENOM:HOG000090323 ProtClustDB:CLSN2914140
EMBL:AY234412 EMBL:AF488588 IPI:IPI00520911 PIR:T00464
RefSeq:NP_181028.2 UniGene:At.37756 ProteinModelPortal:Q84RD0
SMR:Q84RD0 STRING:Q84RD0 EnsemblPlants:AT2G34820.1 GeneID:818047
KEGG:ath:AT2G34820 TAIR:At2g34820 eggNOG:NOG260330
InParanoid:Q84RD0 OMA:EIFNETH PhylomeDB:Q84RD0
Genevestigator:Q84RD0 Uniprot:Q84RD0
Length = 291
Score = 147 (56.8 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 30/64 (46%), Positives = 42/64 (65%)
Query: 120 QSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNIV 179
QS+AAR RR +I+EK L +L+PGG K++TA M A +YVKFL+ Q+ +LQ Q
Sbjct: 168 QSIAARGRRRRIAEKTHELGKLIPGGNKLNTAEMFQAAAKYVKFLQSQVGILQLMQTTKK 227
Query: 180 GDDH 183
G +
Sbjct: 228 GSSN 231
>UNIPROTKB|Q5NAE0 [details] [associations]
symbol:P0498A12.33 "Putative BP-5 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003020
ProteinModelPortal:Q5NAE0 Gramene:Q5NAE0 Uniprot:Q5NAE0
Length = 565
Score = 151 (58.2 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 34/83 (40%), Positives = 55/83 (66%)
Query: 93 AAMQPVDID--PTTIRKPKRRNIRISDDPQ--SVAARHRREKISEKIRILQRLVPGGTKM 148
+A Q D+D P +RK R+ + S + +++ R RR++I+EK+R LQ L+P K+
Sbjct: 286 SASQDDDLDDEPGVLRKSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKI 345
Query: 149 DTASMLDEAIRYVKFLKRQIRLL 171
D ASMLDEAI Y+K L+ Q++++
Sbjct: 346 DKASMLDEAIEYLKTLQLQVQMM 368
>TAIR|locus:2204569 [details] [associations]
symbol:AT1G30670 "AT1G30670" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC007060 EMBL:AF488587 IPI:IPI00540602 PIR:B86432
RefSeq:NP_174355.1 UniGene:At.40503 ProteinModelPortal:Q9SA82
SMR:Q9SA82 PRIDE:Q9SA82 EnsemblPlants:AT1G30670.1 GeneID:839947
KEGG:ath:AT1G30670 TAIR:At1g30670 eggNOG:NOG324437
HOGENOM:HOG000090323 InParanoid:Q9SA82 OMA:RRITEKT PhylomeDB:Q9SA82
ProtClustDB:CLSN2914140 Genevestigator:Q9SA82 Uniprot:Q9SA82
Length = 264
Score = 143 (55.4 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 29/56 (51%), Positives = 40/56 (71%)
Query: 120 QSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
QS+AAR RR +I+EK + L +L+PG K +TA M + A +YVKFL+ QI +LQ Q
Sbjct: 139 QSIAARKRRRRITEKTQELGKLIPGSQKHNTAEMFNAAAKYVKFLQAQIEILQLKQ 194
>TAIR|locus:2079676 [details] [associations]
symbol:AT3G07340 "AT3G07340" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC009853 EMBL:AK175369 EMBL:AK175496
EMBL:AK176563 EMBL:AK176663 EMBL:BT026497 EMBL:AF488595
IPI:IPI00521004 RefSeq:NP_187390.1 UniGene:At.40357
ProteinModelPortal:Q9SRT2 SMR:Q9SRT2 EnsemblPlants:AT3G07340.1
GeneID:819922 KEGG:ath:AT3G07340 GeneFarm:2908 TAIR:At3g07340
eggNOG:NOG283912 InParanoid:Q9SRT2 OMA:MENELFM PhylomeDB:Q9SRT2
ProtClustDB:CLSN2684837 Genevestigator:Q9SRT2 Uniprot:Q9SRT2
Length = 456
Score = 132 (51.5 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 30/55 (54%), Positives = 39/55 (70%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMD-TASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE++++LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 267 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 321
Score = 37 (18.1 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 166 RQIRLLQSNQCNIVGDDHYNKLSL 189
+Q+ L S+ ++GD H L L
Sbjct: 355 QQVLQLDSSAETLLGDHHNKNLQL 378
>TAIR|locus:2115080 [details] [associations]
symbol:SPT "AT4G36930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009908 "flower
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009409 "response to cold" evidence=IMP] [GO:0010114 "response
to red light" evidence=IMP] [GO:0010187 "negative regulation of
seed germination" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048440 "carpel development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007623 "circadian
rhythm" evidence=IEP] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0007623 GO:GO:0009409 GO:GO:0003700 GO:GO:0006351
GO:GO:0010114 GO:GO:0010187 GO:GO:0048440 GO:GO:0010154
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:Z99707 EMBL:AL161590 EMBL:AF319540
EMBL:AK229267 EMBL:BT026462 IPI:IPI00541204 PIR:B85436
RefSeq:NP_568010.1 UniGene:At.4639 ProteinModelPortal:Q9FUA4
SMR:Q9FUA4 IntAct:Q9FUA4 STRING:Q9FUA4 EnsemblPlants:AT4G36930.1
GeneID:829847 KEGG:ath:AT4G36930 TAIR:At4g36930 eggNOG:NOG276771
HOGENOM:HOG000090429 InParanoid:Q9FUA4 OMA:NAPEMIN PhylomeDB:Q9FUA4
ProtClustDB:CLSN2917674 Genevestigator:Q9FUA4 GermOnline:AT4G36930
Uniprot:Q9FUA4
Length = 373
Score = 130 (50.8 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 32/85 (37%), Positives = 52/85 (61%)
Query: 98 VDIDPTTIRKPKRRNI--RI-SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASML 154
VD P++ P R+ R + + +++ + RR +I+EK++ LQ L+P K D ASML
Sbjct: 177 VDEAPSSKSGPSSRSSSKRCRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASML 236
Query: 155 DEAIRYVKFLKRQIRLL-QSNQCNI 178
DEAI Y+K L+ Q+++L N N+
Sbjct: 237 DEAIEYLKQLQLQVQMLTMRNGINL 261
Score = 35 (17.4 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 211 DPILGHSLPFHGNRNSSFYFN 231
DP+L H+ F N+ N
Sbjct: 287 DPLLNHTNQFASTSNAPEMIN 307
>UNIPROTKB|Q6EPZ6 [details] [associations]
symbol:P0014G10.34 "BHLH transcription factor PTF1-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 HOGENOM:HOG000239571 EMBL:AP005784
RefSeq:NP_001175840.1 UniGene:Os.59658
EnsemblPlants:LOC_Os09g25040.1 GeneID:9272478 KEGG:osa:9272478
OMA:SMSVLTA Uniprot:Q6EPZ6
Length = 499
Score = 147 (56.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 33/69 (47%), Positives = 46/69 (66%)
Query: 108 PKRRNIRI----SDDPQSVAARHRREKISEKIRILQRLVPGGTKM---DTASMLDEAIRY 160
P R+ +R + DP S+A R RRE+I+E+++ LQ LVP K+ D ASMLDE I Y
Sbjct: 245 PPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDY 304
Query: 161 VKFLKRQIR 169
VKFL+ Q++
Sbjct: 305 VKFLQLQVK 313
>TAIR|locus:2155503 [details] [associations]
symbol:ALC "AT5G67110" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010047 "fruit dehiscence" evidence=IMP]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010047 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:BT028946 EMBL:AF488605 IPI:IPI00537617
IPI:IPI00846166 IPI:IPI00846501 RefSeq:NP_001078810.1
RefSeq:NP_001078811.1 RefSeq:NP_201512.1 UniGene:At.28825
HSSP:P36956 ProteinModelPortal:Q9FHA2 SMR:Q9FHA2 IntAct:Q9FHA2
STRING:Q9FHA2 EnsemblPlants:AT5G67110.1 GeneID:836846
KEGG:ath:AT5G67110 TAIR:At5g67110 eggNOG:NOG329583
HOGENOM:HOG000033902 InParanoid:Q9FHA2 OMA:HTRINET PhylomeDB:Q9FHA2
ProtClustDB:CLSN2686902 Genevestigator:Q9FHA2 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 Uniprot:Q9FHA2
Length = 210
Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 30/66 (45%), Positives = 47/66 (71%)
Query: 109 KRRN-IRISDDPQ--SVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
K+RN ++ + D Q +++ + RR KI+EK++ LQ+L+P K D ASMLDEAI Y+K L+
Sbjct: 84 KQRNSLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQ 143
Query: 166 RQIRLL 171
Q++ L
Sbjct: 144 LQVQTL 149
>TAIR|locus:2141573 [details] [associations]
symbol:FBH2 "AT4G09180" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL161514 HOGENOM:HOG000095218 ProtClustDB:CLSN2679906
EMBL:AF488613 EMBL:BT010423 EMBL:AK230384 IPI:IPI00545642
PIR:B85093 RefSeq:NP_192657.1 UniGene:At.33710
ProteinModelPortal:Q9M0R0 SMR:Q9M0R0 PaxDb:Q9M0R0 PRIDE:Q9M0R0
EnsemblPlants:AT4G09180.1 GeneID:826499 KEGG:ath:AT4G09180
TAIR:At4g09180 eggNOG:NOG277140 InParanoid:Q9M0R0 OMA:MENLMED
PhylomeDB:Q9M0R0 Genevestigator:Q9M0R0 Uniprot:Q9M0R0
Length = 262
Score = 138 (53.6 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 31/58 (53%), Positives = 41/58 (70%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSNQ 175
P+S+A R RR +IS++IR LQ LVP K +TA ML+EA+ YVK L+RQI+ L Q
Sbjct: 194 PRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQELTEEQ 251
>UNIPROTKB|Q84T08 [details] [associations]
symbol:OSJNBa0087C10.10 "BHLH transcription factor,
putative, expressed" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC108906 RefSeq:NP_001051605.1
UniGene:Os.33544 STRING:Q84T08 EnsemblPlants:LOC_Os03g58830.1
GeneID:4334471 KEGG:osa:4334471 OMA:GTSTSEW ProtClustDB:CLSN2694415
Uniprot:Q84T08
Length = 265
Score = 138 (53.6 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 35/80 (43%), Positives = 49/80 (61%)
Query: 99 DIDPTTIRKPKRRNIRI------SDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTA 151
D +P PK+ I + + D S+A R RREKISE+++ILQ LVPG K+ A
Sbjct: 120 DQNPPPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 179
Query: 152 SMLDEAIRYVKFLKRQIRLL 171
S+LDE I Y++ L+RQ+ L
Sbjct: 180 SVLDEIINYIQALQRQVEFL 199
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 138 (53.6 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 27/70 (38%), Positives = 48/70 (68%)
Query: 102 PTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYV 161
PT +P+ + R ++ +++ + RR +I+EK++ LQ L+P +K D ASMLD+AI Y+
Sbjct: 20 PTRPARPRGKRSRAAE-VHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYL 78
Query: 162 KFLKRQIRLL 171
K L+ Q+++L
Sbjct: 79 KQLQLQVQML 88
>UNIPROTKB|Q8S490 [details] [associations]
symbol:rau1 "Transcription factor RAU1" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF465824
ProteinModelPortal:Q8S490 Gramene:Q8S490 Genevestigator:Q8S490
Uniprot:Q8S490
Length = 150
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 29/60 (48%), Positives = 42/60 (70%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
P+S+A R RR +ISE+IR LQ LVP K +TA MLD A+ Y+K L++Q++ L ++ N
Sbjct: 79 PRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQVKGLNDSRAN 138
>UNIPROTKB|Q7FA23 [details] [associations]
symbol:OSJNBa0058K23.6 "Os04g0618600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP008210
EMBL:CM000141 EMBL:AL662970 RefSeq:NP_001053893.1 UniGene:Os.4548
EnsemblPlants:LOC_Os04g52770.1 GeneID:4337015 KEGG:osa:4337015
eggNOG:NOG275283 OMA:RSAEFHN ProtClustDB:CLSN2695118 Uniprot:Q7FA23
Length = 181
Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 30/64 (46%), Positives = 45/64 (70%)
Query: 108 PKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQ 167
P RR+ R S + + + R RR++I+EK++ LQ L+P TK D SMLDEAI Y+K L+ Q
Sbjct: 8 PTRRS-R-SAEFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQ 65
Query: 168 IRLL 171
+++L
Sbjct: 66 LQML 69
>TAIR|locus:2059979 [details] [associations]
symbol:FBH4 "AT2G42280" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0046685
"response to arsenic-containing substance" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC002561 GO:GO:0048573
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG312535
HOGENOM:HOG000242890 EMBL:BT015339 EMBL:BT015712 EMBL:AK228981
IPI:IPI00530686 IPI:IPI00538142 PIR:T00937 RefSeq:NP_181757.2
RefSeq:NP_973670.1 UniGene:At.12448 UniGene:At.43726
ProteinModelPortal:Q66GR3 SMR:Q66GR3 PRIDE:Q66GR3
EnsemblPlants:AT2G42280.1 GeneID:818829 KEGG:ath:AT2G42280
TAIR:At2g42280 InParanoid:Q66GR3 OMA:NDNRANC PhylomeDB:Q66GR3
ProtClustDB:CLSN2681218 Genevestigator:Q66GR3 Uniprot:Q66GR3
Length = 359
Score = 136 (52.9 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 29/60 (48%), Positives = 42/60 (70%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
P+S+A R RR +ISE++R LQ LVP K +T+ MLD A+ Y+K L+RQ ++L N+ N
Sbjct: 289 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYKILNDNRAN 348
>TAIR|locus:2139484 [details] [associations]
symbol:CIB1 "AT4G34530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IDA]
[GO:0009911 "positive regulation of flower development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161585 EMBL:AL023094
HOGENOM:HOG000238007 EMBL:AF488596 EMBL:AK117846 EMBL:AY120741
EMBL:BT005313 IPI:IPI00519970 PIR:T05273 RefSeq:NP_195179.2
UniGene:At.48937 ProteinModelPortal:Q8GY61 SMR:Q8GY61
DIP:DIP-59356N IntAct:Q8GY61 PRIDE:Q8GY61 EnsemblPlants:AT4G34530.1
GeneID:829604 KEGG:ath:AT4G34530 TAIR:At4g34530 eggNOG:NOG251551
InParanoid:Q8GY61 OMA:SGYSHEM PhylomeDB:Q8GY61
ProtClustDB:CLSN2915063 Genevestigator:Q8GY61 Uniprot:Q8GY61
Length = 335
Score = 134 (52.2 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 31/55 (56%), Positives = 38/55 (69%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMD-TASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ LQ LVPG K+ A MLDE I YV+ L+RQI L
Sbjct: 181 DSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFL 235
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 137 (53.3 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 26/56 (46%), Positives = 42/56 (75%)
Query: 116 SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
S + +++ R RR++I+EK+R LQ L+P K+D ASMLDEAI Y+K L+ Q++++
Sbjct: 344 SAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIM 399
>TAIR|locus:2008693 [details] [associations]
symbol:FBH1 "AT1G35460" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AF488612 EMBL:AC023064 EMBL:AF411791 EMBL:AY093794
IPI:IPI00538359 PIR:F86475 RefSeq:NP_174776.1 UniGene:At.18017
ProteinModelPortal:Q9C8P8 SMR:Q9C8P8 PRIDE:Q9C8P8
EnsemblPlants:AT1G35460.1 GeneID:840438 KEGG:ath:AT1G35460
TAIR:At1g35460 eggNOG:NOG263612 HOGENOM:HOG000095218
InParanoid:Q9C8P8 OMA:NLCLTEL PhylomeDB:Q9C8P8
ProtClustDB:CLSN2679906 Genevestigator:Q9C8P8 Uniprot:Q9C8P8
Length = 259
Score = 131 (51.2 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 30/58 (51%), Positives = 40/58 (68%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSNQ 175
P+S+A R RR +IS++IR LQ LVP K +TA ML+EA+ YVK L+ QI+ L Q
Sbjct: 191 PRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQIQELTEQQ 248
>UNIPROTKB|Q8GRJ1 [details] [associations]
symbol:OJ1343_B12.103 "Transcription factor BHLH9-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP003824 EMBL:AP004010
Uniprot:Q8GRJ1
Length = 417
Score = 134 (52.2 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 28/66 (42%), Positives = 45/66 (68%)
Query: 106 RKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
R +R R ++ +++ R RR++I+EK+R LQ LVP K D AS+LDEAI Y+K L+
Sbjct: 220 RPAAKRRTRAAE-VHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQ 278
Query: 166 RQIRLL 171
Q++++
Sbjct: 279 MQVQIM 284
>TAIR|locus:2026037 [details] [associations]
symbol:FBH3 "AT1G51140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0048573 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC079828 EMBL:AY034941 EMBL:AY063120
IPI:IPI00519239 PIR:H96548 RefSeq:NP_564583.1 UniGene:At.19155
ProteinModelPortal:Q9C690 SMR:Q9C690 PaxDb:Q9C690 PRIDE:Q9C690
EnsemblPlants:AT1G51140.1 GeneID:841537 KEGG:ath:AT1G51140
TAIR:At1g51140 eggNOG:NOG312535 HOGENOM:HOG000242890
InParanoid:Q9C690 OMA:TKDEDSA PhylomeDB:Q9C690
ProtClustDB:CLSN2917227 Genevestigator:Q9C690 Uniprot:Q9C690
Length = 379
Score = 133 (51.9 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 28/58 (48%), Positives = 43/58 (74%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPG-GTKMDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
P+S+A R RR KISE++R LQ LVP T+ +TA MLD A++Y+K L+ Q++ L+ ++
Sbjct: 314 PRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQVKALEESR 371
>TAIR|locus:2115200 [details] [associations]
symbol:BEE2 "AT4G36540" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
PROSITE:PS00678 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161589 EMBL:Z99708
EMBL:AF488591 EMBL:AF370231 EMBL:AY059122 EMBL:AY054588
EMBL:BT000388 EMBL:AY084997 EMBL:AY138254 IPI:IPI00540245
IPI:IPI00548266 PIR:D85431 RefSeq:NP_195372.1 RefSeq:NP_849508.1
UniGene:At.25403 ProteinModelPortal:Q93VJ4 SMR:Q93VJ4 IntAct:Q93VJ4
PRIDE:Q93VJ4 EnsemblPlants:AT4G36540.1 GeneID:829806
KEGG:ath:AT4G36540 TAIR:At4g36540 eggNOG:NOG240651
InParanoid:Q93VJ4 OMA:ELECHID PhylomeDB:Q93VJ4
ProtClustDB:CLSN2685556 Genevestigator:Q93VJ4 Uniprot:Q93VJ4
Length = 304
Score = 131 (51.2 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 36/92 (39%), Positives = 56/92 (60%)
Query: 105 IRKPKRRNIRI----SDDPQSVAARHRREKISEKIRILQRLVPGGTKMD-TASMLDEAIR 159
I+KP ++R + D S+A R RREKIS+K++ LQ +VPG K+ A MLDE I
Sbjct: 133 IQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIIN 192
Query: 160 YVKFLKRQIRLLQSNQCNIVGDD---HYNKLS 188
YV+ L++Q+ L S + +++ + H + LS
Sbjct: 193 YVQSLQQQVEFL-SMKLSVINPELECHIDDLS 223
>UNIPROTKB|Q6K8Y4 [details] [associations]
symbol:OJ1695_H09.18 "Basic helix-loop-helix (BHLH)-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000239571 EMBL:AP003975 EMBL:AP004094
EnsemblPlants:LOC_Os02g55250.1 OMA:GQDDFFD Uniprot:Q6K8Y4
Length = 463
Score = 134 (52.2 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 26/49 (53%), Positives = 37/49 (75%)
Query: 127 RREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
RRE+I+E+++ LQ LVP K D ASMLDE I YVKFL+ Q+++L ++
Sbjct: 252 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSR 300
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 131 (51.2 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 25/51 (49%), Positives = 38/51 (74%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
+++ + RR KI+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q+++L
Sbjct: 109 NLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 159
>TAIR|locus:2039445 [details] [associations]
symbol:AMS "AT2G16910" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IMP] [GO:0048658 "tapetal
layer development" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC005167 EMBL:AF488565 IPI:IPI00529182 PIR:G84545
RefSeq:NP_179283.2 UniGene:At.48482 UniGene:At.70395
ProteinModelPortal:Q9ZVX2 SMR:Q9ZVX2 STRING:Q9ZVX2 PRIDE:Q9ZVX2
EnsemblPlants:AT2G16910.1 GeneID:816194 KEGG:ath:AT2G16910
TAIR:At2g16910 eggNOG:NOG313389 HOGENOM:HOG000033929
InParanoid:Q9ZVX2 OMA:PRTKSCE PhylomeDB:Q9ZVX2
ProtClustDB:CLSN2690121 ArrayExpress:Q9ZVX2 Genevestigator:Q9ZVX2
GO:GO:0048658 Uniprot:Q9ZVX2
Length = 571
Score = 118 (46.6 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 31/88 (35%), Positives = 52/88 (59%)
Query: 100 IDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIR 159
ID K K+++ + S +A R RR+K+++++ L+ LVP TK+D AS+L +AI
Sbjct: 295 IDDEDDPKYKKKSGKGSQAKNLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAIN 354
Query: 160 YVKFLKRQIRLLQSN-QCNIVGDDHYNK 186
YVK L+ + + LQ + N +D N+
Sbjct: 355 YVKELQNEAKELQDELEENSETEDGSNR 382
Score = 45 (20.9 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 215 GHSLPFHGNRNSSFYFNHH 233
GH PF N S + +HH
Sbjct: 543 GHHHPFDHQMNQSAHHHHH 561
>UNIPROTKB|Q69WS3 [details] [associations]
symbol:OJ1118_E12.15 "Putative bHLH protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003743
ProteinModelPortal:Q69WS3 Gramene:Q69WS3 Uniprot:Q69WS3
Length = 268
Score = 129 (50.5 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 28/55 (50%), Positives = 39/55 (70%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ILQ LVPG K+ AS+LDE I Y++ L+ Q+ +
Sbjct: 137 DSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQVEFM 191
>UNIPROTKB|Q7X7U7 [details] [associations]
symbol:OSJNBb0091E11.4 "OJ990528_30.9 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008210
EMBL:CM000141 EMBL:AL606629 EMBL:AK059273 EMBL:AK101636
EMBL:AL662938 RefSeq:NP_001053182.1 UniGene:Os.55009
EnsemblPlants:LOC_Os04g41570.1 EnsemblPlants:LOC_Os04g41570.2
EnsemblPlants:LOC_Os04g41570.3 GeneID:4336261 KEGG:osa:4336261
eggNOG:NOG241248 OMA:SKGLCLV Uniprot:Q7X7U7
Length = 156
Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 104 TIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKF 163
T +KP RN D P V+ + +++KI E++ LQ+LV K DTAS+L EA Y+KF
Sbjct: 36 TSKKP--RNTSPRDAP--VSPKEKKDKIGERVAALQQLVSPFGKTDTASVLQEASGYIKF 91
Query: 164 LKRQIRLLQS 173
L +Q+ +L S
Sbjct: 92 LHQQLEVLSS 101
>TAIR|locus:2202867 [details] [associations]
symbol:BPEp "AT1G59640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048446 "petal morphogenesis" evidence=IMP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009753 "response to jasmonic
acid stimulus" evidence=RCA] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0048441 "petal development" evidence=RCA] [GO:0048443 "stamen
development" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AM269753 EMBL:AM269754
EMBL:AC009317 EMBL:BT003964 EMBL:BT005064 EMBL:AY086373
EMBL:AB028232 IPI:IPI00530097 IPI:IPI00531813 PIR:B96620 PIR:T52428
RefSeq:NP_564749.1 RefSeq:NP_849829.1 UniGene:At.455
ProteinModelPortal:Q0JXE7 SMR:Q0JXE7 IntAct:Q0JXE7 STRING:Q0JXE7
PRIDE:Q0JXE7 EnsemblPlants:AT1G59640.2 GeneID:842254
KEGG:ath:AT1G59640 TAIR:At1g59640 eggNOG:NOG296410
InParanoid:Q0JXE7 OMA:RGASPEW PhylomeDB:Q0JXE7
ProtClustDB:CLSN2688917 Genevestigator:Q0JXE7 GO:GO:0048446
Uniprot:Q0JXE7
Length = 343
Score = 130 (50.8 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 29/55 (52%), Positives = 39/55 (70%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ILQ LVPG K+ A +LDE I Y++ L+RQ+ L
Sbjct: 145 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 199
>TAIR|locus:505006688 [details] [associations]
symbol:AT5G50915 "AT5G50915" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009739 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB017063 EMBL:AF428350 EMBL:AY057549 EMBL:AY113059
EMBL:AY087602 IPI:IPI00536793 RefSeq:NP_568745.1 RefSeq:NP_851163.1
UniGene:At.23601 ProteinModelPortal:Q93W88 SMR:Q93W88
EnsemblPlants:AT5G50915.1 EnsemblPlants:AT5G50915.2 GeneID:835164
KEGG:ath:AT5G50915 TAIR:At5g50915 eggNOG:NOG262059
HOGENOM:HOG000242938 InParanoid:Q93W88 OMA:ISERMRT PhylomeDB:Q93W88
ProtClustDB:CLSN2689980 Genevestigator:Q93W88 Uniprot:Q93W88
Length = 286
Score = 128 (50.1 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 31/62 (50%), Positives = 39/62 (62%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMD-TASMLDEAIRYVKFLKRQIRLLQSNQC 176
D S+A R RREKISE++R LQ LVPG K+ A MLDE I YV+ L+ Q+ L
Sbjct: 145 DSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSMKLT 204
Query: 177 NI 178
+I
Sbjct: 205 SI 206
>UNIPROTKB|Q6Z2G7 [details] [associations]
symbol:P0680A05.9 "Putative bHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008208 eggNOG:NOG251551 EMBL:AP005323 EMBL:AK119183
RefSeq:NP_001047868.1 UniGene:Os.7751
EnsemblPlants:LOC_Os02g47660.1 GeneID:4330462 KEGG:osa:4330462
OMA:TVESLCQ ProtClustDB:CLSN2693116 Uniprot:Q6Z2G7
Length = 361
Score = 130 (50.8 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 29/55 (52%), Positives = 38/55 (69%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMD-TASMLDEAIRYVKFLKRQIRLL 171
D S+A R RRE+ISE++R LQ LVPG K+ A MLDE I YV+ L++Q+ L
Sbjct: 173 DSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEFL 227
>UNIPROTKB|Q5N802 [details] [associations]
symbol:P0004D12.24 "BHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008207 eggNOG:NOG283912 EMBL:AP003433 EMBL:HQ858864
EMBL:AK101063 RefSeq:NP_001045188.1 UniGene:Os.5763
EnsemblPlants:LOC_Os01g68700.2 GeneID:4324327 KEGG:osa:4324327
ProtClustDB:CLSN2692207 Uniprot:Q5N802
Length = 481
Score = 132 (51.5 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 31/71 (43%), Positives = 43/71 (60%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSNQC 176
D S+A R RREKIS+++++LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 286 DSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLA 345
Query: 177 NIVGDDHYNKL 187
+ +N L
Sbjct: 346 TVNPQLDFNNL 356
>TAIR|locus:2115683 [details] [associations]
symbol:AT4G05170 "AT4G05170" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA]
InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 EMBL:AL161503 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000095220 EMBL:BT015446 IPI:IPI00532427 IPI:IPI01019413
PIR:A85065 RefSeq:NP_192426.2 UniGene:At.51015
ProteinModelPortal:Q9M0X8 SMR:Q9M0X8 DNASU:825865 GeneID:825865
KEGG:ath:AT4G05170 TAIR:At4g05170 eggNOG:NOG256664 PhylomeDB:Q9M0X8
ArrayExpress:Q9M0X8 Genevestigator:Q9M0X8 Uniprot:Q9M0X8
Length = 298
Score = 127 (49.8 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 28/82 (34%), Positives = 51/82 (62%)
Query: 99 DIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAI 158
+ P +++P+ + S P + + R+EK+ ++I LQ+LV K DTAS+L+EA+
Sbjct: 152 EYSPRLLKRPRLETL--SPLP---SFKVRKEKLGDRITALQQLVSPFGKTDTASVLNEAV 206
Query: 159 RYVKFLKRQIRLLQSNQCNIVG 180
Y+KFL+ Q+ +L + + N +G
Sbjct: 207 EYIKFLQEQVTVLSNPEQNTIG 228
>UNIPROTKB|Q6ZCV8 [details] [associations]
symbol:P0028A08.20 "Os08g0487700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000145 EMBL:AP004557 RefSeq:NP_001062102.1 UniGene:Os.60678
EnsemblPlants:LOC_Os08g38080.1 GeneID:4345892 KEGG:osa:4345892
eggNOG:NOG275480 Uniprot:Q6ZCV8
Length = 365
Score = 128 (50.1 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 29/52 (55%), Positives = 39/52 (75%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKMD-TASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE++++LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 188 SLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEIINYVQSLQRQVEFL 239
>TAIR|locus:2201906 [details] [associations]
symbol:AT1G10120 "AT1G10120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC004122 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT012655 EMBL:AK221806 EMBL:AK229309
EMBL:AK230347 EMBL:AF488606 IPI:IPI00541831 PIR:T00632
RefSeq:NP_172483.4 UniGene:At.43391 UniGene:At.69296
ProteinModelPortal:Q6NKN9 SMR:Q6NKN9 EnsemblPlants:AT1G10120.1
GeneID:837549 KEGG:ath:AT1G10120 TAIR:At1g10120 eggNOG:NOG271189
HOGENOM:HOG000090626 InParanoid:Q6NKN9 OMA:GESSHED PhylomeDB:Q6NKN9
ProtClustDB:CLSN2681496 Genevestigator:Q6NKN9 Uniprot:Q6NKN9
Length = 366
Score = 128 (50.1 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 29/52 (55%), Positives = 38/52 (73%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKMD-TASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE++R+LQ LVPG K+ A MLDE I YV+ L++Q+ L
Sbjct: 218 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 269
>TAIR|locus:2152551 [details] [associations]
symbol:AT5G48560 "AT5G48560" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB015468 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 eggNOG:NOG283912
ProtClustDB:CLSN2684837 EMBL:AF488610 EMBL:BT002945 EMBL:BT005637
IPI:IPI00543091 RefSeq:NP_199667.1 UniGene:At.43769
ProteinModelPortal:Q9FJL4 SMR:Q9FJL4 IntAct:Q9FJL4 PaxDb:Q9FJL4
PRIDE:Q9FJL4 EnsemblPlants:AT5G48560.1 GeneID:834912
KEGG:ath:AT5G48560 TAIR:At5g48560 InParanoid:Q9FJL4 OMA:SASCYAT
PhylomeDB:Q9FJL4 Genevestigator:Q9FJL4 Uniprot:Q9FJL4
Length = 498
Score = 130 (50.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 32/65 (49%), Positives = 43/65 (66%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMD-TASMLDEAIRYVKFLKRQIRLLQSNQC 176
D S+A R RREKI E++++LQ LVPG K+ A MLDE I YV+ L+RQ+ L S +
Sbjct: 310 DSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL-SMKL 368
Query: 177 NIVGD 181
+ V D
Sbjct: 369 SSVND 373
>UNIPROTKB|Q94LR3 [details] [associations]
symbol:OSJNBa0010C11.7 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC069300 RefSeq:NP_001065353.1
UniGene:Os.27587 IntAct:Q94LR3 STRING:Q94LR3 GeneID:4349351
KEGG:osa:4349351 ProtClustDB:CLSN2714538 Uniprot:Q94LR3
Length = 191
Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 22/45 (48%), Positives = 36/45 (80%)
Query: 127 RREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
RR++I++K++ LQ+LVP +K D ASMLDE I Y+K L+ Q++++
Sbjct: 13 RRDRINQKMKTLQKLVPNSSKTDKASMLDEVIDYLKQLQAQVQVM 57
>TAIR|locus:2095198 [details] [associations]
symbol:AT3G23690 "AT3G23690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
EMBL:AP000377 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AY065441 EMBL:AY096536
EMBL:EU550216 EMBL:EU550217 EMBL:EU550218 EMBL:EU550219
EMBL:EU550220 EMBL:EU550221 EMBL:EU550222 EMBL:EU550223
EMBL:EU550224 EMBL:EU550225 EMBL:EU550226 EMBL:EU550227
EMBL:EU550228 EMBL:EU550229 EMBL:EU550230 EMBL:EU550231
EMBL:EU550232 EMBL:EU550233 EMBL:EU550234 EMBL:EU550235
EMBL:EU550236 EMBL:EU550237 EMBL:EU550238 EMBL:EU550239
EMBL:AF488609 IPI:IPI00545445 RefSeq:NP_189011.2 UniGene:At.6666
ProteinModelPortal:Q9LK48 SMR:Q9LK48 PaxDb:Q9LK48 PRIDE:Q9LK48
EnsemblPlants:AT3G23690.1 GeneID:821950 KEGG:ath:AT3G23690
TAIR:At3g23690 eggNOG:NOG292697 InParanoid:Q9LK48 OMA:MEFNANA
PhylomeDB:Q9LK48 ProtClustDB:CLSN2917952 Genevestigator:Q9LK48
Uniprot:Q9LK48
Length = 371
Score = 127 (49.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 29/55 (52%), Positives = 38/55 (69%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMD-TASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE++ +LQ LVPG ++ A MLDE I YV+ L+RQ+ L
Sbjct: 200 DSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFL 254
>UNIPROTKB|Q69JJ6 [details] [associations]
symbol:OSJNBa0026C08.22 "TA1 protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008215
ProtClustDB:CLSN2697804 EMBL:AP006169 EMBL:HQ858863 EMBL:AK121418
RefSeq:NP_001063455.1 UniGene:Os.38400
EnsemblPlants:LOC_Os09g29830.3 GeneID:4347355 KEGG:osa:4347355
Uniprot:Q69JJ6
Length = 428
Score = 128 (50.1 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 29/52 (55%), Positives = 39/52 (75%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKMD-TASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE++++LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 260 SLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 311
>UNIPROTKB|Q84QW1 [details] [associations]
symbol:OJ1191_A10.109 "BHLH transcription
factor(GBOF-1)-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:AP008214
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003888
RefSeq:NP_001062289.1 UniGene:Os.10830
EnsemblPlants:LOC_Os08g41320.1 GeneID:4346087 KEGG:osa:4346087
eggNOG:NOG320619 OMA:ERISQRM ProtClustDB:CLSN2697487 Uniprot:Q84QW1
Length = 405
Score = 127 (49.8 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 28/55 (50%), Positives = 39/55 (70%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RRE+IS+++++LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 213 DSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFL 267
>UNIPROTKB|Q75M33 [details] [associations]
symbol:P0668H12.5 "BHLH transcription factor" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000142 EMBL:AC084818 EMBL:AC073405 EMBL:HQ858853
EMBL:AK065864 RefSeq:NP_001054390.1 UniGene:Os.23082
EnsemblPlants:LOC_Os05g01256.1 EnsemblPlants:LOC_Os05g01256.2
GeneID:4337537 KEGG:osa:4337537 eggNOG:NOG296531 Uniprot:Q75M33
Length = 339
Score = 125 (49.1 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 29/55 (52%), Positives = 38/55 (69%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMD-TASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE++++LQ LVPG K+ A MLDE I YV+ L+ Q+ L
Sbjct: 189 DSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQVEFL 243
>TAIR|locus:2061634 [details] [associations]
symbol:PIL5 "phytochrome interacting factor 3-like 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0015995 "chlorophyll
biosynthetic process" evidence=IMP] [GO:0010187 "negative
regulation of seed germination" evidence=IGI;IMP] [GO:0010313
"phytochrome binding" evidence=IDA] [GO:0009959 "negative
gravitropism" evidence=IMP;TAS] [GO:0010029 "regulation of seed
germination" evidence=TAS] [GO:0010099 "regulation of
photomorphogenesis" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=IMP] [GO:0010161 "red
light signaling pathway" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0048608 "reproductive structure development" evidence=RCA]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010187 GO:GO:0006783 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30
GO:GO:0010161 EMBL:AC006081 HSSP:P61244 HOGENOM:HOG000240264
GO:GO:0015995 GO:GO:0010100 GO:GO:0009740 GO:GO:0009959
EMBL:AF488560 EMBL:AB103113 EMBL:AK228820 EMBL:BT029775
IPI:IPI00527244 IPI:IPI00537020 PIR:A84586 RefSeq:NP_001189559.1
RefSeq:NP_179608.2 RefSeq:NP_849996.1 UniGene:At.43003
UniGene:At.69322 ProteinModelPortal:Q8GZM7 SMR:Q8GZM7 IntAct:Q8GZM7
STRING:Q8GZM7 PRIDE:Q8GZM7 EnsemblPlants:AT2G20180.2
EnsemblPlants:AT2G20180.3 GeneID:816538 KEGG:ath:AT2G20180
TAIR:At2g20180 eggNOG:NOG264707 InParanoid:Q8GZM7 OMA:QEDEMTS
PhylomeDB:Q8GZM7 ProtClustDB:CLSN2690808 Genevestigator:Q8GZM7
GO:GO:0010313 Uniprot:Q8GZM7
Length = 478
Score = 127 (49.8 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 26/59 (44%), Positives = 43/59 (72%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNIV 179
+++ R RR++I+E+++ LQ L+P K D ASMLDEAI Y+K L+ QI+++ S C ++
Sbjct: 290 NLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMM-SMGCGMM 347
>UNIPROTKB|Q84LH4 [details] [associations]
symbol:OSJNBb0011H13.2 "Putative Helix-loop-helix
DNA-binding domain containing protein" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 EMBL:AP008209
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140 EMBL:AC120983
EMBL:AC135956 RefSeq:NP_001051150.1 UniGene:Os.24540
EnsemblPlants:LOC_Os03g51910.1 GeneID:4333984 KEGG:osa:4333984
eggNOG:NOG262475 OMA:SKQMMLS ProtClustDB:CLSN2694257 Uniprot:Q84LH4
Length = 327
Score = 124 (48.7 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 28/52 (53%), Positives = 39/52 (75%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKMD-TASMLDEAIRYVKFLKRQIRLL 171
S+A R RR+KISE++++LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 159 SLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFL 210
>TAIR|locus:2053766 [details] [associations]
symbol:AT2G42300 "AT2G42300" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005956 EMBL:AY065411 EMBL:AY096521 EMBL:AK175584
EMBL:AK176019 EMBL:AK176634 EMBL:AF488583 IPI:IPI00532521
PIR:C84852 RefSeq:NP_850368.1 UniGene:At.28495
ProteinModelPortal:Q8VZ02 SMR:Q8VZ02 EnsemblPlants:AT2G42300.1
GeneID:818831 KEGG:ath:AT2G42300 TAIR:At2g42300 eggNOG:NOG301522
HOGENOM:HOG000037005 InParanoid:Q8VZ02 OMA:PEWGREE PhylomeDB:Q8VZ02
ProtClustDB:CLSN2680198 Genevestigator:Q8VZ02 Uniprot:Q8VZ02
Length = 327
Score = 124 (48.7 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 27/55 (49%), Positives = 40/55 (72%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMD-TASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKI+ ++++LQ LVPG K+ TA +LDE I +V+ L+RQ+ +L
Sbjct: 194 DNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQRQVEML 248
>UNIPROTKB|Q5VR96 [details] [associations]
symbol:P0038C05.31-1 "Os06g0275600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003044 RefSeq:NP_001057380.1 UniGene:Os.32526
EnsemblPlants:LOC_Os06g16400.1 EnsemblPlants:LOC_Os06g16400.2
GeneID:4340749 KEGG:osa:4340749 ProtClustDB:CLSN2697804
Uniprot:Q5VR96
Length = 437
Score = 126 (49.4 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 29/59 (49%), Positives = 40/59 (67%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKMD-TASMLDEAIRYVKFLKRQIRLLQSNQCNI 178
S+A R RREKISE+++ LQ LVPG +K+ A MLDE I YV+ L+RQ+ L ++
Sbjct: 272 SLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASV 330
>TAIR|locus:2126876 [details] [associations]
symbol:UNE10 "AT4G00050" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0009506 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AL161471 HSSP:P22415 GO:GO:0009567
EMBL:AF069299 EMBL:AF488561 EMBL:AK117229 EMBL:BT025971
IPI:IPI00517893 PIR:T01333 RefSeq:NP_191916.3 UniGene:At.44779
ProteinModelPortal:Q8GZ38 SMR:Q8GZ38 IntAct:Q8GZ38
EnsemblPlants:AT4G00050.1 GeneID:828175 KEGG:ath:AT4G00050
TAIR:At4g00050 eggNOG:NOG239145 HOGENOM:HOG000084918
InParanoid:Q8GZ38 OMA:MMSRMNM PhylomeDB:Q8GZ38
ProtClustDB:CLSN2690671 Genevestigator:Q8GZ38 Uniprot:Q8GZ38
Length = 399
Score = 125 (49.1 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
R RR+KI+++++ LQ+LVP +K D ASMLDE I Y+K L+ Q+ ++
Sbjct: 223 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMM 269
>TAIR|locus:2142419 [details] [associations]
symbol:AT5G10570 "AT5G10570" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL353995 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488594 IPI:IPI00529696 PIR:T49982
RefSeq:NP_196619.1 UniGene:At.32362 ProteinModelPortal:Q9LXA9
SMR:Q9LXA9 EnsemblPlants:AT5G10570.1 GeneID:830922
KEGG:ath:AT5G10570 TAIR:At5g10570 eggNOG:NOG310833
HOGENOM:HOG000029066 InParanoid:Q9LXA9 OMA:SSAFDYP PhylomeDB:Q9LXA9
ProtClustDB:CLSN2914918 Genevestigator:Q9LXA9 Uniprot:Q9LXA9
Length = 315
Score = 123 (48.4 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 27/81 (33%), Positives = 49/81 (60%)
Query: 109 KRRNIRISDDPQS--VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKR 166
KR N ++ P +A R RR+++++++ +L+ +VP TKMD S+L +AI Y+K L
Sbjct: 139 KRSNKKLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLD 198
Query: 167 QIRLLQSNQCNIVGDDHYNKL 187
+I LQ ++ + + H + L
Sbjct: 199 KINKLQEDEQELGSNSHLSTL 219
>UNIPROTKB|Q7XT55 [details] [associations]
symbol:OSJNBa0084K20.3 "OSJNBa0076N16.1 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000141 EMBL:AL606613 EMBL:AL731617 Uniprot:Q7XT55
Length = 218
Score = 119 (46.9 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 26/58 (44%), Positives = 40/58 (68%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSNQ 175
P+S+A R RR +ISEK+R LQ LVP K T+ MLD A+ ++K L+ Q++ L+ ++
Sbjct: 144 PRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQSQLQTLKEDK 201
>TAIR|locus:2014144 [details] [associations]
symbol:BEE1 "BR enhanced expression 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC013354
EMBL:AY138253 EMBL:AF488579 EMBL:AK117269 EMBL:BT005268
IPI:IPI00539846 RefSeq:NP_173276.2 UniGene:At.46141
ProteinModelPortal:Q8GZ13 SMR:Q8GZ13 IntAct:Q8GZ13
EnsemblPlants:AT1G18400.1 GeneID:838421 KEGG:ath:AT1G18400
TAIR:At1g18400 eggNOG:euNOG17991 HOGENOM:HOG000090950
InParanoid:Q8GZ13 PhylomeDB:Q8GZ13 ProtClustDB:CLSN2680013
Genevestigator:Q8GZ13 Uniprot:Q8GZ13
Length = 260
Score = 121 (47.7 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 28/55 (50%), Positives = 37/55 (67%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RR KI+E++R LQ +VPG K M A+MLDE I YV+ L+ Q+ L
Sbjct: 154 DSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQVEFL 208
>TAIR|locus:2117788 [details] [associations]
symbol:AT4G28800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 IPI:IPI00517558
IPI:IPI01020410 PIR:T04519 RefSeq:NP_194609.5 UniGene:At.71648
ProteinModelPortal:Q9SVU7 SMR:Q9SVU7 GeneID:829001
KEGG:ath:AT4G28800 TAIR:At4g28800 InParanoid:Q9SVU7
Genevestigator:Q9SVU7 Uniprot:Q9SVU7
Length = 445
Score = 125 (49.1 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 29/68 (42%), Positives = 43/68 (63%)
Query: 110 RRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIR 169
R+ R ++ ++A R RREKI+EK++ LQ+L+P K S LD+AI YVK L+ QI+
Sbjct: 251 RKRSRTAE-MHNLAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVKSLQSQIQ 309
Query: 170 LLQSNQCN 177
+ S N
Sbjct: 310 GMMSPMMN 317
>TAIR|locus:2090679 [details] [associations]
symbol:AT3G19500 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB025624 EMBL:AY084520 EMBL:AF488631 IPI:IPI00518921
RefSeq:NP_566639.1 UniGene:At.38400 ProteinModelPortal:Q9LT67
SMR:Q9LT67 EnsemblPlants:AT3G19500.1 GeneID:821484
KEGG:ath:AT3G19500 TAIR:At3g19500 eggNOG:NOG294378
HOGENOM:HOG000240890 OMA:HVENSNG PhylomeDB:Q9LT67
ProtClustDB:CLSN2688564 Genevestigator:Q9LT67 Uniprot:Q9LT67
Length = 270
Score = 121 (47.7 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 106 RKPKRRNIRISDDPQSVA-ARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFL 164
RKP ++ R + + SV A+ R+E++ E+I LQ+LV K D AS+L EA+ Y+KFL
Sbjct: 135 RKPGKKGKR-NQEKSSVGIAKVRKERLGERIAALQQLVSPYGKTDAASVLHEAMGYIKFL 193
Query: 165 KRQIRLLQS 173
+ QI++L S
Sbjct: 194 QDQIQVLCS 202
>TAIR|locus:2172209 [details] [associations]
symbol:AT5G62610 "AT5G62610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 EMBL:AB020751 HOGENOM:HOG000238007 EMBL:AY072104
EMBL:AY123023 EMBL:AY084578 EMBL:AF488611 IPI:IPI00518025
RefSeq:NP_201067.1 UniGene:At.24534 UniGene:At.24682
ProteinModelPortal:Q9LV17 SMR:Q9LV17 PaxDb:Q9LV17 PRIDE:Q9LV17
EnsemblPlants:AT5G62610.1 GeneID:836382 KEGG:ath:AT5G62610
GeneFarm:2935 TAIR:At5g62610 eggNOG:NOG269855 InParanoid:Q9LV17
OMA:DDSSKMV PhylomeDB:Q9LV17 ProtClustDB:CLSN2916786
Genevestigator:Q9LV17 Uniprot:Q9LV17
Length = 281
Score = 121 (47.7 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 27/55 (49%), Positives = 37/55 (67%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISEK+ LQ ++PG K+ A +LDE I Y++ L+RQ+ L
Sbjct: 162 DRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEFL 216
>TAIR|locus:2205420 [details] [associations]
symbol:AT1G68920 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AF488584 EMBL:AY128299
EMBL:BT002259 IPI:IPI00536565 IPI:IPI00545990 PIR:G96713
RefSeq:NP_001031255.1 RefSeq:NP_177058.1 RefSeq:NP_849863.2
UniGene:At.28096 ProteinModelPortal:Q9CAA9 SMR:Q9CAA9 STRING:Q9CAA9
EnsemblPlants:AT1G68920.1 EnsemblPlants:AT1G68920.2 GeneID:843225
KEGG:ath:AT1G68920 TAIR:At1g68920 eggNOG:NOG301979
HOGENOM:HOG000238007 InParanoid:Q3E6P7 OMA:MLKGGIF PhylomeDB:Q9CAA9
ProtClustDB:CLSN2682343 Genevestigator:Q9CAA9 Uniprot:Q9CAA9
Length = 486
Score = 125 (49.1 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 29/52 (55%), Positives = 37/52 (71%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKMD-TASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE+++ LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 315 SLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 366
>TAIR|locus:2027809 [details] [associations]
symbol:BEE3 "AT1G73830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000090950 ProtClustDB:CLSN2680013 EMBL:AF488585
EMBL:AC012679 EMBL:AK118781 EMBL:BT006055 IPI:IPI00541876
RefSeq:NP_177524.2 UniGene:At.34949 ProteinModelPortal:Q8GWK7
SMR:Q8GWK7 EnsemblPlants:AT1G73830.1 GeneID:843719
KEGG:ath:AT1G73830 TAIR:At1g73830 eggNOG:NOG264296
InParanoid:Q8GWK7 OMA:LENNFHQ PhylomeDB:Q8GWK7
Genevestigator:Q8GWK7 Uniprot:Q8GWK7
Length = 261
Score = 120 (47.3 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 27/55 (49%), Positives = 37/55 (67%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RR KI+E+++ LQ +VPG K M A+MLDE I YV+ L+ Q+ L
Sbjct: 156 DSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFL 210
>UNIPROTKB|Q8GZV6 [details] [associations]
symbol:OJ1017C11.10 "Putative uncharacterized protein
OJ1017C11.10" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR001810
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50181 PROSITE:PS50888
SMART:SM00256 SMART:SM00353 GO:GO:0005634 SUPFAM:SSF81383
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR019955
PROSITE:PS50053 EMBL:AC135157 ProteinModelPortal:Q8GZV6
Gramene:Q8GZV6 Uniprot:Q8GZV6
Length = 776
Score = 127 (49.8 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 28/52 (53%), Positives = 38/52 (73%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKMD-TASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKI+E++++LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 640 SLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFL 691
>UNIPROTKB|Q75H21 [details] [associations]
symbol:OSJNBa0027H16.21 "Putative uncharacterized protein
OSJNBa0027H16.21" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238091 EMBL:AC137921
ProteinModelPortal:Q75H21 Gramene:Q75H21 Uniprot:Q75H21
Length = 384
Score = 122 (48.0 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 20/53 (37%), Positives = 39/53 (73%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
P++ ++E++ + +R L+ ++PGG +MDT ++LDEA+RY+K LK +++ L
Sbjct: 204 PEAGGGERKKERMKKMMRTLKGIIPGGDRMDTPAVLDEAVRYLKSLKVEVKKL 256
>UNIPROTKB|Q75GI1 [details] [associations]
symbol:OSJNBa0013A09.16 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC145380
EMBL:AC135228 EMBL:AK120539 RefSeq:NP_001051131.1 UniGene:Os.7441
EnsemblPlants:LOC_Os03g51580.1 GeneID:4333965 KEGG:osa:4333965
OMA:DSCITEQ Uniprot:Q75GI1
Length = 359
Score = 121 (47.7 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 25/51 (49%), Positives = 38/51 (74%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
+A R RREK+S++ L ++VPG KMD AS+L +AI+YVK L+ Q++ L+
Sbjct: 184 LAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLE 234
>TAIR|locus:2045263 [details] [associations]
symbol:AT2G31730 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009723 "response to
ethylene stimulus" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] InterPro:IPR011598
PROSITE:PS50888 SMART:SM00353 EMBL:CP002685 GO:GO:0003700
GO:GO:0009739 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240890 OMA:SKGLCLV EMBL:AJ576041 IPI:IPI00539360
RefSeq:NP_180732.3 UniGene:At.38180 ProteinModelPortal:Q7XJU1
SMR:Q7XJU1 DNASU:817730 EnsemblPlants:AT2G31730.1 GeneID:817730
KEGG:ath:AT2G31730 TAIR:At2g31730 InParanoid:Q7XJU1
PhylomeDB:Q7XJU1 ProtClustDB:CLSN2687695 Genevestigator:Q7XJU1
Uniprot:Q7XJU1
Length = 153
Score = 112 (44.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 21/53 (39%), Positives = 40/53 (75%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
S +++ R++K++E+I LQ+LV K DTAS+L E ++Y++FL+ Q+++L +
Sbjct: 35 SFSSKERKDKLAERISALQQLVSPYGKTDTASVLLEGMQYIQFLQEQVKVLSA 87
>TAIR|locus:2117773 [details] [associations]
symbol:AT4G28790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 EMBL:BT015828
EMBL:BT020214 IPI:IPI00521625 IPI:IPI00529771 IPI:IPI00915578
PIR:T04520 RefSeq:NP_194608.3 RefSeq:NP_974634.1 UniGene:At.31988
ProteinModelPortal:Q9SVU6 SMR:Q9SVU6 PRIDE:Q9SVU6
EnsemblPlants:AT4G28790.1 GeneID:829000 KEGG:ath:AT4G28790
TAIR:At4g28790 HOGENOM:HOG000240264 InParanoid:Q9SVU6
PhylomeDB:Q9SVU6 ProtClustDB:CLSN2680993 Genevestigator:Q9SVU6
Uniprot:Q9SVU6
Length = 413
Score = 120 (47.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 24/49 (48%), Positives = 36/49 (73%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRL 170
++ R RR+KI+E ++ LQ L+P TK D +SMLD+ I YVK L+ QI++
Sbjct: 284 LSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQIQM 332
>TAIR|locus:2053733 [details] [associations]
symbol:PIF4 "AT2G43010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA;IMP] [GO:0010161 "red light
signaling pathway" evidence=IGI] [GO:0009704 "de-etiolation"
evidence=IMP] [GO:0010600 "regulation of auxin biosynthetic
process" evidence=IDA] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009585 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0010161 GO:GO:0009704 GO:GO:0010928
EMBL:AC006224 EMBL:AJ440755 EMBL:AF251694 EMBL:AY142625
EMBL:AF360221 EMBL:EF193514 EMBL:EF193515 EMBL:EF193516
EMBL:EF193517 EMBL:EF193518 EMBL:EF193519 EMBL:EF193520
EMBL:EF193521 EMBL:EF193522 EMBL:EF193523 EMBL:EF193524
EMBL:EF193525 EMBL:EF193526 EMBL:EF193527 IPI:IPI00520232
IPI:IPI00534557 PIR:H84860 RefSeq:NP_565991.2 UniGene:At.19015
ProteinModelPortal:Q8W2F3 SMR:Q8W2F3 IntAct:Q8W2F3 STRING:Q8W2F3
EnsemblPlants:AT2G43010.1 GeneID:818903 KEGG:ath:AT2G43010
TAIR:At2g43010 eggNOG:NOG244119 InParanoid:Q8W2F3 KO:K16189
OMA:IRETEME PhylomeDB:Q8W2F3 ProtClustDB:CLSN2680212
Genevestigator:Q8W2F3 GermOnline:AT2G43010 GO:GO:0010600
Uniprot:Q8W2F3
Length = 430
Score = 120 (47.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 25/66 (37%), Positives = 45/66 (68%)
Query: 106 RKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
R R R ++ +++ R RR++I+E+++ LQ L+P +K D AS+LDEAI Y+K L+
Sbjct: 249 RSGSNRRSRAAE-VHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQ 307
Query: 166 RQIRLL 171
Q++++
Sbjct: 308 LQLQVM 313
>TAIR|locus:2041369 [details] [associations]
symbol:PIL1 "phytochrome interacting factor 3-like 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0010017 "red or far-red light
signaling pathway" evidence=IEP;IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AC004411 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0010017 GO:GO:0009641 HOGENOM:HOG000115543
ProtClustDB:CLSN2680935 EMBL:AB090873 EMBL:AY219127 EMBL:AY954840
IPI:IPI00545843 PIR:T02190 RefSeq:NP_182220.2 UniGene:At.36425
ProteinModelPortal:Q8L5W8 SMR:Q8L5W8 IntAct:Q8L5W8 STRING:Q8L5W8
PRIDE:Q8L5W8 EnsemblPlants:AT2G46970.1 GeneID:819311
KEGG:ath:AT2G46970 TAIR:At2g46970 eggNOG:NOG291407
InParanoid:Q8L5W8 OMA:MELVCEN PhylomeDB:Q8L5W8
Genevestigator:Q8L5W8 Uniprot:Q8L5W8
Length = 416
Score = 119 (46.9 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 26/66 (39%), Positives = 44/66 (66%)
Query: 106 RKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
RKP + R S + + R RR++ ++K+R LQ L+P K D AS+LDEAI+Y++ L+
Sbjct: 221 RKPVTKRKR-STEVHKLYERKRRDEFNKKMRALQDLLPNCYKDDKASLLDEAIKYMRTLQ 279
Query: 166 RQIRLL 171
Q++++
Sbjct: 280 LQVQMM 285
>TAIR|locus:2032990 [details] [associations]
symbol:CES "AT1G25330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:2000488 "positive regulation of brassinosteroid biosynthetic
process" evidence=IMP] [GO:0048441 "petal development"
evidence=RCA] [GO:0048443 "stamen development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG264296 EMBL:AC079374 EMBL:DQ446289 EMBL:DQ652859
EMBL:AK175757 EMBL:AY088885 EMBL:AF488607 IPI:IPI00519962
PIR:B86383 PIR:D86381 RefSeq:NP_564229.1 UniGene:At.48236
UniGene:At.63980 ProteinModelPortal:A4D998 SMR:A4D998
EnsemblPlants:AT1G25330.1 GeneID:839117 KEGG:ath:AT1G25330
GeneFarm:2907 TAIR:At1g25330 InParanoid:A4D998 PhylomeDB:A4D998
Genevestigator:A4D998 GO:GO:2000488 Uniprot:A4D998
Length = 223
Score = 117 (46.2 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 29/55 (52%), Positives = 36/55 (65%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKI+E+++ LQ LVPG K M A MLD I YV+ L+ QI L
Sbjct: 113 DSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIEFL 167
>TAIR|locus:4010713915 [details] [associations]
symbol:AT4G28811 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
HOGENOM:HOG000240264 EMBL:AJ519811 IPI:IPI00518617 PIR:H85335
PIR:T04518 RefSeq:NP_001078462.1 UniGene:At.46149
ProteinModelPortal:Q8GT73 SMR:Q8GT73 PRIDE:Q8GT73
EnsemblPlants:AT4G28811.1 GeneID:5008170 KEGG:ath:AT4G28811
TAIR:At4g28811 eggNOG:NOG314238 PhylomeDB:Q8GT73
ProtClustDB:CLSN2699107 Genevestigator:Q8GT73 Uniprot:Q8GT73
Length = 544
Score = 119 (46.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 110 RRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIR 169
R+ R +D +++ R RRE+I+E+++ LQ L+P K D SML++ I YVK L+ QI+
Sbjct: 353 RKRSRAAD-MHNLSERRRRERINERMKTLQELLPRCRKTDKVSMLEDVIEYVKSLQLQIQ 411
Query: 170 LL 171
++
Sbjct: 412 MM 413
>TAIR|locus:2039094 [details] [associations]
symbol:AIB "AT2G46510" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009611 "response to wounding" evidence=IEP;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009414
"response to water deprivation" evidence=RCA] [GO:0009620 "response
to fungus" evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic
process" evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0009737
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009611
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC006526 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC006418
EMBL:AY094399 IPI:IPI00535471 PIR:G84903 RefSeq:NP_566078.1
UniGene:At.19872 ProteinModelPortal:Q9ZPY8 SMR:Q9ZPY8 PaxDb:Q9ZPY8
PRIDE:Q9ZPY8 EnsemblPlants:AT2G46510.1 GeneID:819262
KEGG:ath:AT2G46510 TAIR:At2g46510 eggNOG:NOG313259
HOGENOM:HOG000238207 InParanoid:Q9ZPY8 OMA:KIMEDER PhylomeDB:Q9ZPY8
ProtClustDB:CLSN2917347 Genevestigator:Q9ZPY8 InterPro:IPR025610
Pfam:PF14215 Uniprot:Q9ZPY8
Length = 566
Score = 119 (46.9 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 28/85 (32%), Positives = 51/85 (60%)
Query: 100 IDPTTIRKPKRRNIRISDDPQS--VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEA 157
+D RK R+ ++P + A R RREK++++ L+ +VP +KMD AS+L +A
Sbjct: 374 VDEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDA 433
Query: 158 IRYVKFLKRQIRLLQSNQCNIVGDD 182
I Y+K L+ ++++++ + VG D
Sbjct: 434 ISYIKELQEKVKIMEDER---VGTD 455
>UNIPROTKB|Q6Z861 [details] [associations]
symbol:P0572D06.2 "cDNA clone:002-118-A09, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 SMART:SM00353
GO:GO:0005634 SUPFAM:SSF47459 EMBL:AP008208 EMBL:CM000139
ProtClustDB:CLSN2688090 EMBL:AP004798 EMBL:AK102703 EMBL:AK106848
EMBL:AK107002 RefSeq:NP_001046664.1 UniGene:Os.49098
EnsemblPlants:LOC_Os02g21090.1 EnsemblPlants:LOC_Os02g21090.2
EnsemblPlants:LOC_Os02g21090.3 GeneID:4329144 KEGG:osa:4329144
eggNOG:NOG323253 Uniprot:Q6Z861
Length = 254
Score = 117 (46.2 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 19/45 (42%), Positives = 36/45 (80%)
Query: 127 RREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++E++ + +R L+ ++PGG +MDT ++LDEA+RY+K LK +++ L
Sbjct: 203 KKERMKKMVRTLKGIIPGGNQMDTPAVLDEAVRYLKSLKVEVKKL 247
>TAIR|locus:505006103 [details] [associations]
symbol:AT1G05805 "AT1G05805" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC009999 HOGENOM:HOG000242890 EMBL:BT000954 EMBL:AY086106
IPI:IPI00516925 PIR:F86192 RefSeq:NP_563749.1 UniGene:At.11933
ProteinModelPortal:Q8H102 SMR:Q8H102 IntAct:Q8H102 STRING:Q8H102
PaxDb:Q8H102 PRIDE:Q8H102 EnsemblPlants:AT1G05805.1 GeneID:837090
KEGG:ath:AT1G05805 TAIR:At1g05805 eggNOG:NOG249421
InParanoid:Q8H102 OMA:NEVNETP PhylomeDB:Q8H102
ProtClustDB:CLSN2687697 Genevestigator:Q8H102 Uniprot:Q8H102
Length = 362
Score = 118 (46.6 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 37/92 (40%), Positives = 53/92 (57%)
Query: 88 MMYRIAAMQ-PVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGT 146
M Y MQ P D P IR KR + P+S+A R RR +IS K++ LQ LVP
Sbjct: 265 MNYMDNFMQLPEDSVPCKIRA-KRG---CATHPRSIAERERRTRISGKLKKLQDLVPNMD 320
Query: 147 KMDTAS-MLDEAIRYVKFLKRQIRLLQSNQCN 177
K + S MLD A++++K L+ Q++ L+ +Q N
Sbjct: 321 KQTSYSDMLDLAVQHIKGLQHQLQNLKKDQEN 352
>UNIPROTKB|Q75KP4 [details] [associations]
symbol:OSJNBa0065F09.5 "Expressed protein (With alternative
splicing)" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:DP000009 EMBL:AP008209
Gene3D:4.10.280.10 EMBL:AC099323 EMBL:AK065674
RefSeq:NP_001050282.1 UniGene:Os.59384
EnsemblPlants:LOC_Os03g27390.1 EnsemblPlants:LOC_Os03g27390.2
GeneID:4333025 KEGG:osa:4333025 OMA:SARPDHS ProtClustDB:CLSN2693978
Uniprot:Q75KP4
Length = 315
Score = 117 (46.2 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 21/47 (44%), Positives = 34/47 (72%)
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
+ RRE+I E + L+++VPGG D ++LDEAI Y+K+LK +++ L
Sbjct: 264 KRRRERIQETVAALRKIVPGGIAKDATAVLDEAICYLKYLKLKVKTL 310
>TAIR|locus:2137574 [details] [associations]
symbol:AT4G37850 "AT4G37850" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL035709
EMBL:AL161592 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
ProtClustDB:CLSN2690865 EMBL:AF488567 IPI:IPI00544527 PIR:T06032
RefSeq:NP_195498.3 UniGene:At.31223 ProteinModelPortal:Q9T072
SMR:Q9T072 EnsemblPlants:AT4G37850.1 GeneID:829941
KEGG:ath:AT4G37850 TAIR:At4g37850 eggNOG:NOG262524
InParanoid:Q8S3F0 PhylomeDB:Q9T072 Genevestigator:Q9T072
Uniprot:Q9T072
Length = 328
Score = 117 (46.2 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 25/69 (36%), Positives = 44/69 (63%)
Query: 107 KPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKR 166
+P RN + D +A R RREK++++ L LVPG KMD AS+L +A++++K+L+
Sbjct: 141 QPFSRNQSNAQD-HIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQE 199
Query: 167 QIRLLQSNQ 175
++ L+ +
Sbjct: 200 RVGELEEQK 208
>TAIR|locus:2028804 [details] [associations]
symbol:CIB5 "AT1G26260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009911 "positive regulation of flower development"
evidence=IGI] [GO:0048513 "organ development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC079829 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238007
EMBL:AK117355 EMBL:BT005334 EMBL:AJ630483 EMBL:AY568655
EMBL:AF488608 IPI:IPI00529982 IPI:IPI00547855 PIR:H86388
RefSeq:NP_001031093.1 RefSeq:NP_173950.1 RefSeq:NP_973913.1
UniGene:At.41276 ProteinModelPortal:Q9C670 SMR:Q9C670 IntAct:Q9C670
STRING:Q9C670 EnsemblPlants:AT1G26260.1 EnsemblPlants:AT1G26260.2
GeneID:839167 KEGG:ath:AT1G26260 TAIR:At1g26260 eggNOG:NOG284637
InParanoid:Q9C670 OMA:ETHGYES PhylomeDB:Q9C670
ProtClustDB:CLSN2682645 Genevestigator:Q9C670 Uniprot:Q9C670
Length = 390
Score = 117 (46.2 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 29/52 (55%), Positives = 36/52 (69%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKMD-TASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE+++ LQ LVPG K+ A MLDE I YV+ L+ QI L
Sbjct: 235 SLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFL 286
>TAIR|locus:2077680 [details] [associations]
symbol:PIL6 "AT3G59060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0009693
"ethylene biosynthetic process" evidence=IMP] [GO:0010600
"regulation of auxin biosynthetic process" evidence=IDA]
[GO:0010928 "regulation of auxin mediated signaling pathway"
evidence=IDA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=RCA] [GO:0006546 "glycine catabolic process" evidence=RCA]
[GO:0006636 "unsaturated fatty acid biosynthetic process"
evidence=RCA] [GO:0006733 "oxidoreduction coenzyme metabolic
process" evidence=RCA] [GO:0006766 "vitamin metabolic process"
evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009072 "aromatic amino acid family metabolic
process" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009684
"indoleacetic acid biosynthetic process" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010017 "red or far-red
light signaling pathway" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019748 "secondary metabolic process"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009693 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL163527 GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240264 HSSP:P22415 GO:GO:0010928
ProtClustDB:CLSN2680212 GO:GO:0010600 EMBL:AF488598 EMBL:AB103112
EMBL:AY081271 EMBL:BT000049 IPI:IPI00541791 IPI:IPI00543835
IPI:IPI00890365 PIR:T47788 RefSeq:NP_001030889.1
RefSeq:NP_001030890.1 RefSeq:NP_191465.3 RefSeq:NP_851021.1
UniGene:At.43437 UniGene:At.67329 ProteinModelPortal:Q84LH8
SMR:Q84LH8 IntAct:Q84LH8 STRING:Q84LH8 EnsemblPlants:AT3G59060.2
EnsemblPlants:AT3G59060.3 EnsemblPlants:AT3G59060.4 GeneID:825075
KEGG:ath:AT3G59060 TAIR:At3g59060 eggNOG:NOG259206
InParanoid:Q84LH8 OMA:SHCGSNQ PhylomeDB:Q84LH8
Genevestigator:Q84LH8 Uniprot:Q84LH8
Length = 444
Score = 117 (46.2 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 24/66 (36%), Positives = 45/66 (68%)
Query: 106 RKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
R R R ++ +++ R RR++I+E+++ LQ L+P ++ D AS+LDEAI Y+K L+
Sbjct: 248 RSGSTRRSRAAE-VHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQ 306
Query: 166 RQIRLL 171
Q++++
Sbjct: 307 MQLQVM 312
>UNIPROTKB|Q2QMN2 [details] [associations]
symbol:LOC_Os12g40590 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 EMBL:CM000149 eggNOG:NOG272270
KEGG:dosa:Os12t0597800-01 Uniprot:Q2QMN2
Length = 265
Score = 115 (45.5 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 105 IRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFL 164
++ RRN ++ + + RR +I+EK ++LQRLVPG K +S LD I Y+K L
Sbjct: 143 VKHKARRNPGYAET-HGLTEKRRRSRINEKFKMLQRLVPGCDKCSQSSTLDRTIHYMKSL 201
Query: 165 KRQIRLL 171
++Q++ +
Sbjct: 202 QQQLQAM 208
>TAIR|locus:2118524 [details] [associations]
symbol:TT8 "AT4G09820" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0009962 "regulation of flavonoid
biosynthetic process" evidence=TAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:2000029 "regulation
of proanthocyanidin biosynthetic process" evidence=IEP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL161516 GO:GO:0009813
EMBL:AL049482 HOGENOM:HOG000237985 GO:GO:0010026 GO:GO:2000029
EMBL:AJ277509 EMBL:DQ446813 EMBL:DQ653187 IPI:IPI00530243
RefSeq:NP_192720.2 UniGene:At.10175 ProteinModelPortal:Q9FT81
SMR:Q9FT81 IntAct:Q9FT81 STRING:Q9FT81 PaxDb:Q9FT81 PRIDE:Q9FT81
EnsemblPlants:AT4G09820.1 GeneID:826571 KEGG:ath:AT4G09820
TAIR:At4g09820 eggNOG:NOG249918 InParanoid:Q9FT81 OMA:NEVDSKT
PhylomeDB:Q9FT81 ProtClustDB:CLSN2681600 Genevestigator:Q9FT81
Uniprot:Q9FT81
Length = 518
Score = 116 (45.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 32/89 (35%), Positives = 51/89 (57%)
Query: 85 MKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPG 144
+K+M++R+ + D T K KR + D VA R RREK++EK L+ +VP
Sbjct: 338 LKQMIFRVPFLH----DNT---KDKR--LPREDLSHVVAERRRREKLNEKFITLRSMVPF 388
Query: 145 GTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
TKMD S+L + I YV L++++ L++
Sbjct: 389 VTKMDKVSILGDTIAYVNHLRKRVHELEN 417
>TAIR|locus:4010713916 [details] [associations]
symbol:AT4G28815 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
PIR:H85335 PIR:T04518 EMBL:AJ577586 IPI:IPI00530422
RefSeq:NP_001078463.1 UniGene:At.71260 ProteinModelPortal:Q7XHI7
SMR:Q7XHI7 EnsemblPlants:AT4G28815.1 GeneID:5008171
KEGG:ath:AT4G28815 TAIR:At4g28815 eggNOG:NOG83291 PhylomeDB:Q7XHI7
Genevestigator:Q7XHI7 Uniprot:Q7XHI7
Length = 307
Score = 114 (45.2 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 25/59 (42%), Positives = 39/59 (66%)
Query: 110 RRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQI 168
R+ R ++ ++A R RREKI+E+++ LQ+L+P K SML++ I YVK L+ QI
Sbjct: 146 RKRSRAAE-MHNLAERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEYVKSLEMQI 203
>UNIPROTKB|Q2QML8 [details] [associations]
symbol:LOC_Os12g40730 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 KEGG:dosa:Os12t0599400-00
KEGG:dosa:Os12t0599550-00 Gramene:Q2QML8 HOGENOM:HOG000244163
Uniprot:Q2QML8
Length = 387
Score = 115 (45.5 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 126 HRRE-KISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
HRR KI+E+ R LQRLVPG K + AS LD+ I+Y+K L+ Q++ +
Sbjct: 224 HRRRFKITERFRTLQRLVPGCDKSNQASTLDQTIQYMKSLQHQLKAM 270
>UNIPROTKB|Q84R60 [details] [associations]
symbol:OSJNBb0113I20.8 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R60 Gramene:Q84R60
Uniprot:Q84R60
Length = 353
Score = 114 (45.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 22/54 (40%), Positives = 38/54 (70%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
+A R RREKI+++ L ++PG KMD A++L +A+RYVK ++ ++ L+ +Q
Sbjct: 195 IAERKRREKINQRFIELSTVIPGLKKMDKATILSDAVRYVKEMQEKLSELEQHQ 248
>UNIPROTKB|Q657A4 [details] [associations]
symbol:P0022F12.30 "Regulatory protein B-Peru-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP002908 EMBL:AP003310 EnsemblPlants:LOC_Os01g39580.1
Uniprot:Q657A4
Length = 370
Score = 114 (45.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
++ R RREK++E IL+ LVP K+D AS+L E I Y+K L+R+++ L+S +
Sbjct: 191 MSERRRREKLNEMFLILKSLVPSIDKVDKASILSETIAYLKELERRVQELESGK 244
>UNIPROTKB|Q2QLR0 [details] [associations]
symbol:LOC_Os12g43620 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011
KEGG:dosa:Os12t0632600-00 Gramene:Q2QLR0 OMA:TNVMPFP Uniprot:Q2QLR0
Length = 338
Score = 113 (44.8 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 21/51 (41%), Positives = 37/51 (72%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
+A R RREKI+++ L ++PG KMD A++L +A++YVK L+ +++ L+
Sbjct: 170 IAERRRREKINQRFIELSTVIPGLKKMDKATILGDAVKYVKELQEKVKTLE 220
>UNIPROTKB|Q7XPS7 [details] [associations]
symbol:OSJNBa0065O17.4 "OSJNBa0065O17.4 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL606682
ProteinModelPortal:Q7XPS7 Gramene:Q7XPS7 Uniprot:Q7XPS7
Length = 567
Score = 115 (45.5 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 22/53 (41%), Positives = 39/53 (73%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSN 174
++ R RREK++E IL+ +VP K+D AS+L+E I Y+K L+++++ L+S+
Sbjct: 395 ISERRRREKLNEMFLILKSIVPSIHKVDKASILEETIAYLKVLEKRVKELESS 447
>TAIR|locus:2052372 [details] [associations]
symbol:PAR1 "PHY RAPIDLY REGULATED 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0009641 "shade avoidance" evidence=IEP;IMP] [GO:0032502
"developmental process" evidence=IMP] [GO:0003712 "transcription
cofactor activity" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IMP] GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003712
EMBL:AC006931 GO:GO:0009641 GO:GO:0032502 HOGENOM:HOG000153160
ProtClustDB:CLSN2684867 EMBL:AY084291 EMBL:BT004925 EMBL:AK118184
EMBL:BN000864 IPI:IPI00545101 PIR:C84859 RefSeq:NP_565988.1
UniGene:At.43188 ProteinModelPortal:Q9SJH0 IntAct:Q9SJH0
STRING:Q9SJH0 EnsemblPlants:AT2G42870.1 GeneID:818887
KEGG:ath:AT2G42870 TAIR:At2g42870 eggNOG:NOG294535
InParanoid:Q9SJH0 OMA:GFERRTK PhylomeDB:Q9SJH0 ArrayExpress:Q9SJH0
Genevestigator:Q9SJH0 Uniprot:Q9SJH0
Length = 118
Score = 96 (38.9 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 21/71 (29%), Positives = 39/71 (54%)
Query: 106 RKPKRR----NIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYV 161
R+ KRR N + +D + A +++ EKI LQR++PGG + ++ +E Y+
Sbjct: 32 RRTKRRLSETNASVREDREE--AEEEEDEVKEKIEALQRIIPGGAALGVDALFEETAGYI 89
Query: 162 KFLKRQIRLLQ 172
L+ QI+ ++
Sbjct: 90 LSLQCQIKTIK 100
>TAIR|locus:2031978 [details] [associations]
symbol:AT1G05710 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009723 "response to
ethylene stimulus" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS]
InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GO:GO:0003700 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240890 ProtClustDB:CLSN2687695 EMBL:AY072363
EMBL:BT006558 IPI:IPI00544028 RefSeq:NP_849597.1 UniGene:At.42378
UniGene:At.72027 ProteinModelPortal:Q8VY82 IntAct:Q8VY82
PRIDE:Q8VY82 EnsemblPlants:AT1G05710.2 GeneID:837078
KEGG:ath:AT1G05710 TAIR:At1g05710 InParanoid:Q8VY82 OMA:MENTVGV
PhylomeDB:Q8VY82 ArrayExpress:Q8VY82 Genevestigator:Q8VY82
Uniprot:Q8VY82
Length = 171
Score = 106 (42.4 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 20/53 (37%), Positives = 37/53 (69%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
S +++ R++K+ E+I LQ++V K DTAS+L +A+ Y++FL Q+++ S
Sbjct: 33 SFSSKERKDKVGERISALQQIVSPYGKTDTASVLLDAMHYIEFLHEQVKVCSS 85
>TAIR|locus:2098008 [details] [associations]
symbol:PIL2 "phytochrome interacting factor 3-like 2"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010017 "red or far-red light signaling
pathway" evidence=IEP] [GO:0010089 "xylem development"
evidence=RCA] [GO:0044036 "cell wall macromolecule metabolic
process" evidence=RCA] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 GO:GO:0010017
EMBL:AL138651 EMBL:AB090874 EMBL:BT033108 IPI:IPI00525935
IPI:IPI00846835 PIR:T48001 RefSeq:NP_001078329.1 RefSeq:NP_191768.2
UniGene:At.1005 UniGene:At.50304 ProteinModelPortal:Q8L5W7
SMR:Q8L5W7 IntAct:Q8L5W7 STRING:Q8L5W7 EnsemblPlants:AT3G62090.2
GeneID:825382 KEGG:ath:AT3G62090 TAIR:At3g62090 eggNOG:NOG305930
HOGENOM:HOG000115543 InParanoid:Q8L5W7 OMA:ETNMLES PhylomeDB:Q8L5W7
ProtClustDB:CLSN2680935 Genevestigator:Q8L5W7 Uniprot:Q8L5W7
Length = 363
Score = 112 (44.5 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 27/73 (36%), Positives = 43/73 (58%)
Query: 102 PTTIRKP---KRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAI 158
P RK ++RN + P+ R++R I++K+R LQ L+P K D SMLDEAI
Sbjct: 176 PARTRKALVKRKRNAEAYNSPE----RNQRNDINKKMRTLQNLLPNSHKDDNESMLDEAI 231
Query: 159 RYVKFLKRQIRLL 171
Y+ L+ Q++++
Sbjct: 232 NYMTNLQLQVQMM 244
>TAIR|locus:2062225 [details] [associations]
symbol:AT2G22750 "AT2G22750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF488562 EMBL:DQ446549
EMBL:DQ653015 IPI:IPI00538506 IPI:IPI00846694 PIR:D84616
RefSeq:NP_001077944.1 RefSeq:NP_179860.2 UniGene:At.39395
ProteinModelPortal:Q1PF17 SMR:Q1PF17 EnsemblPlants:AT2G22750.2
GeneID:816805 KEGG:ath:AT2G22750 TAIR:At2g22750 eggNOG:NOG266714
HOGENOM:HOG000240300 InParanoid:Q8S3F3 OMA:FDISIIA PhylomeDB:Q1PF17
ProtClustDB:CLSN2690865 Genevestigator:Q1PF17 Uniprot:Q1PF17
Length = 305
Score = 111 (44.1 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 20/48 (41%), Positives = 35/48 (72%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIR 169
+A R RREK++++ L L+PG KMD AS+L +AI+++K+L+ ++
Sbjct: 129 LAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVK 176
>UNIPROTKB|Q94HA7 [details] [associations]
symbol:OSJNBb0048A17.16 "Os03g0759700 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 EMBL:AP008209
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140 eggNOG:NOG294378
EMBL:AC084282 EMBL:AK072833 RefSeq:NP_001051340.1 UniGene:Os.51847
EnsemblPlants:LOC_Os03g55220.1 EnsemblPlants:LOC_Os03g55220.2
GeneID:4334181 KEGG:osa:4334181 OMA:PTTECSS ProtClustDB:CLSN2694316
Uniprot:Q94HA7
Length = 317
Score = 111 (44.1 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
R RRE++ E+I LQ+LV K DTAS+L EA+ Y++FL Q+++L S
Sbjct: 159 RVRRERLGERIIALQQLVSPFGKSDTASVLHEALGYIRFLHDQVQVLSS 207
>UNIPROTKB|Q60EJ4 [details] [associations]
symbol:OSJNBa0017K09.4 "Os05g0501200 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000142
HOGENOM:HOG000241059 EMBL:AC130597 RefSeq:NP_001055968.1
UniGene:Os.80283 EnsemblPlants:LOC_Os05g42180.1 GeneID:4339235
KEGG:osa:4339235 eggNOG:NOG235707 ProtClustDB:CLSN2695716
Uniprot:Q60EJ4
Length = 323
Score = 111 (44.1 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 29/72 (40%), Positives = 39/72 (54%)
Query: 102 PTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYV 161
P +KP RI + R+EK+ ++I LQ+LV K DTAS+L EAI Y+
Sbjct: 192 PAAAKKP-----RIEAPSPMPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYI 246
Query: 162 KFLKRQIRLLQS 173
KFL Q+ L S
Sbjct: 247 KFLHDQVASLSS 258
>TAIR|locus:2155725 [details] [associations]
symbol:bHLH093 "AT5G65640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB026639 HOGENOM:HOG000029066 EMBL:AF488621 EMBL:BT025665
EMBL:AK229018 EMBL:AY085134 IPI:IPI00533579 IPI:IPI00785991
RefSeq:NP_001078801.1 RefSeq:NP_569014.1 UniGene:At.28897
ProteinModelPortal:Q9LSL1 SMR:Q9LSL1 EnsemblPlants:AT5G65640.1
GeneID:836690 KEGG:ath:AT5G65640 TAIR:At5g65640 eggNOG:NOG245311
InParanoid:Q9LSL1 OMA:PLMESDQ PhylomeDB:Q9LSL1
ProtClustDB:CLSN2686406 Genevestigator:Q9LSL1 Uniprot:Q9LSL1
Length = 351
Score = 111 (44.1 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 25/83 (30%), Positives = 51/83 (61%)
Query: 109 KRRNIRISDDPQS--VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKR 166
K+++ ++ P +A R RR+++++++ +L+ +VP +KMD S+L +AI Y+K L
Sbjct: 166 KKKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLD 225
Query: 167 QIRLLQSNQCNI--VGDDHYNKL 187
+I LQ + + + H++KL
Sbjct: 226 KINKLQDEEQELGNSNNSHHSKL 248
>TAIR|locus:2007263 [details] [associations]
symbol:AT1G49830 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598
SMART:SM00353 EMBL:CP002684 Gene3D:4.10.280.10 SUPFAM:SSF47459
IPI:IPI00544298 RefSeq:NP_175405.2 UniGene:At.52101
ProteinModelPortal:F4I3E6 SMR:F4I3E6 EnsemblPlants:AT1G49830.1
GeneID:841406 KEGG:ath:AT1G49830 OMA:HETMGYI Uniprot:F4I3E6
Length = 250
Score = 109 (43.4 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 26/67 (38%), Positives = 39/67 (58%)
Query: 107 KPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKR 166
KP +R R A+ ++EK+ EKI LQ LV K D AS+L E + Y+KFL+
Sbjct: 106 KPGKRCKRDQKKSSLGNAKVKKEKVGEKITTLQHLVSPYGKTDAASVLHETMGYIKFLQD 165
Query: 167 QIRLLQS 173
Q+++L +
Sbjct: 166 QVQVLST 172
>TAIR|locus:2053718 [details] [associations]
symbol:IBH1 "ILI1 binding bHLH 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR011598 PROSITE:PS50888
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003700 EMBL:AC006224
EMBL:AY062456 EMBL:AY093279 EMBL:AJ576045 IPI:IPI00525883
PIR:E84861 RefSeq:NP_181834.1 UniGene:At.27337
ProteinModelPortal:Q9SKX1 SMR:Q9SKX1 IntAct:Q9SKX1 PaxDb:Q9SKX1
PRIDE:Q9SKX1 EnsemblPlants:AT2G43060.1 GeneID:818908
KEGG:ath:AT2G43060 TAIR:At2g43060 eggNOG:NOG295507
HOGENOM:HOG000146367 InParanoid:Q9SKX1 OMA:MEETAHY
ProtClustDB:CLSN2912886 ArrayExpress:Q9SKX1 Genevestigator:Q9SKX1
Uniprot:Q9SKX1
Length = 156
Score = 103 (41.3 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 24/80 (30%), Positives = 42/80 (52%)
Query: 93 AAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTAS 152
A ++ D D I + RR +IS + + R + E L+ LVPGG M+T+
Sbjct: 70 ALLRRADKDDNKIVRFSRRKWKISSKRRR--SNQRAPVVEEAAERLRNLVPGGGGMETSK 127
Query: 153 MLDEAIRYVKFLKRQIRLLQ 172
+++E Y+K L Q++++Q
Sbjct: 128 LMEETAHYIKCLSMQVKVMQ 147
>TAIR|locus:2198253 [details] [associations]
symbol:AT1G29950 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC008030 EMBL:AC022455 EMBL:AF361607 EMBL:AY074843
EMBL:AK175631 EMBL:AK230374 IPI:IPI00532385 PIR:C86423
RefSeq:NP_564342.1 RefSeq:NP_973937.1 UniGene:At.43371
ProteinModelPortal:Q9ASX9 SMR:Q9ASX9 EnsemblPlants:AT1G29950.1
EnsemblPlants:AT1G29950.2 GeneID:6240759 GeneID:839873
KEGG:ath:AT1G29950 KEGG:ath:AT1G29951 TAIR:At1g29950
eggNOG:NOG300108 HOGENOM:HOG000238091 InParanoid:Q9ASX9 OMA:PNEIDAL
PhylomeDB:Q9ASX9 ProtClustDB:CLSN2688090 Genevestigator:Q9ASX9
Uniprot:Q9ASX9
Length = 251
Score = 108 (43.1 bits), Expect = 0.00012, P = 0.00012
Identities = 20/44 (45%), Positives = 35/44 (79%)
Query: 128 REKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
R+K+ + + +L+R+VPGG +M+TA +LDEA++Y+K LK + + L
Sbjct: 199 RKKMKKMMGVLRRIVPGGEQMNTACVLDEAVQYLKSLKIEAQKL 242
>TAIR|locus:2095612 [details] [associations]
symbol:AT3G22100 "AT3G22100" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB028622 EMBL:AB493628 IPI:IPI00523954 RefSeq:NP_188848.1
UniGene:At.65118 ProteinModelPortal:Q9LRJ4 SMR:Q9LRJ4 PRIDE:Q9LRJ4
EnsemblPlants:AT3G22100.1 GeneID:821772 KEGG:ath:AT3G22100
TAIR:At3g22100 eggNOG:NOG286522 HOGENOM:HOG000095223 OMA:PLESVYN
ProtClustDB:CLSN2685292 Genevestigator:Q9LRJ4 Uniprot:Q9LRJ4
Length = 252
Score = 108 (43.1 bits), Expect = 0.00013, P = 0.00013
Identities = 22/46 (47%), Positives = 34/46 (73%)
Query: 127 RREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
+R KIS+KIR L++L+P KM+ A L+E+ +Y+KFL+ QI L+
Sbjct: 142 KRRKISDKIRSLEKLMPWERKMNLAMTLEESHKYIKFLQSQIASLR 187
>TAIR|locus:2062230 [details] [associations]
symbol:AT2G22760 "AT2G22760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
EMBL:AF488563 EMBL:DQ446550 EMBL:DQ653016 IPI:IPI00530407
PIR:E84616 RefSeq:NP_179861.2 UniGene:At.39393
ProteinModelPortal:Q1PF16 SMR:Q1PF16 IntAct:Q1PF16 PRIDE:Q1PF16
EnsemblPlants:AT2G22760.1 GeneID:816806 KEGG:ath:AT2G22760
TAIR:At2g22760 eggNOG:NOG292366 InParanoid:Q1PF16 OMA:GCMINIL
PhylomeDB:Q1PF16 ProtClustDB:CLSN2690866 Genevestigator:Q1PF16
Uniprot:Q1PF16
Length = 295
Score = 109 (43.4 bits), Expect = 0.00013, P = 0.00013
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
+A R RREK+SEK L L+PG K D ++LD+AI +K L+ Q+R L+ +
Sbjct: 122 LAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLRTLKEEK 175
>TAIR|locus:2178555 [details] [associations]
symbol:MYC3 "AT5G46760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0006952 GO:GO:0009753 GO:GO:0003677
GO:GO:0009718 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251690 IPI:IPI00533290
RefSeq:NP_199488.1 UniGene:At.28315 ProteinModelPortal:Q9FIP9
SMR:Q9FIP9 DIP:DIP-58585N PaxDb:Q9FIP9 PRIDE:Q9FIP9
EnsemblPlants:AT5G46760.1 GeneID:834719 KEGG:ath:AT5G46760
TAIR:At5g46760 eggNOG:NOG295658 InParanoid:Q9FIP9 OMA:TASSIEM
PhylomeDB:Q9FIP9 ProtClustDB:CLSN2686023 Genevestigator:Q9FIP9
Uniprot:Q9FIP9
Length = 592
Score = 112 (44.5 bits), Expect = 0.00013, P = 0.00013
Identities = 26/85 (30%), Positives = 54/85 (63%)
Query: 96 QPVDIDPTTIRKPKRRNIRIS---DDPQS--VAARHRREKISEKIRILQRLVPGGTKMDT 150
+ + ++P +KP++R + + ++P + A R RREK++++ L+ +VP +KMD
Sbjct: 388 EAIVVEPPE-KKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDK 446
Query: 151 ASMLDEAIRYVKFLKRQIRLLQSNQ 175
AS+L +AI Y+ LK +++ +S++
Sbjct: 447 ASLLGDAISYINELKSKLQQAESDK 471
>TAIR|locus:2141216 [details] [associations]
symbol:B70 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR011598 PROSITE:PS50805 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161554
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:EF637083 EMBL:AL031187 EMBL:EF182720
EMBL:AY065362 EMBL:AY122937 IPI:IPI00529333 PIR:T05176
RefSeq:NP_193865.2 UniGene:At.28517 ProteinModelPortal:Q8VZ22
SMR:Q8VZ22 EnsemblPlants:AT4G21340.1 GeneID:827884
KEGG:ath:AT4G21340 TAIR:At4g21340 eggNOG:NOG319921
HOGENOM:HOG000095220 OMA:NESRMIS PhylomeDB:Q8VZ22
ProtClustDB:CLSN2690318 Genevestigator:Q8VZ22 Uniprot:Q8VZ22
Length = 301
Score = 109 (43.4 bits), Expect = 0.00013, P = 0.00013
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 127 RREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQI--RLLQSNQCNIVGDDHY 184
R+EK+ ++I LQ+LV K DTAS+L +AI Y+KFL+ QI ++ S N +G
Sbjct: 192 RKEKLGDRITALQQLVSPFGKTDTASVLHDAIDYIKFLQEQITEKVSTSPHLNSIGSGEQ 251
Query: 185 NKLS 188
+ S
Sbjct: 252 KQWS 255
>UNIPROTKB|Q657Z3 [details] [associations]
symbol:P0005A05.10 "Putative ethylene-responsive protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000138 EMBL:AP002863
UniGene:Os.45859 KEGG:dosa:Os01t0105700-01 Uniprot:Q657Z3
Length = 387
Score = 110 (43.8 bits), Expect = 0.00014, P = 0.00014
Identities = 27/71 (38%), Positives = 42/71 (59%)
Query: 103 TTIRKPKRRNIRISDDPQSV--AARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRY 160
+T P + R+ S+ + + R+EK+ ++I LQ+LV K DTAS+L EAI Y
Sbjct: 248 STALPPSSKKPRLESHSSSMLPSFKVRKEKLGDRIAALQQLVSPFGKTDTASVLMEAIGY 307
Query: 161 VKFLKRQIRLL 171
+KFL+ Q+ L
Sbjct: 308 IKFLQDQVETL 318
>TAIR|locus:2035609 [details] [associations]
symbol:MYC2 "AT1G32640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009963 "positive regulation of flavonoid biosynthetic process"
evidence=IEP;RCA] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IMP] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IMP] [GO:2000068
"regulation of defense response to insect" evidence=IMP]
[GO:0009611 "response to wounding" evidence=IEP;RCA;TAS]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009620 "response to
fungus" evidence=RCA] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0009269 "response to desiccation" evidence=IEP] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634
GO:GO:0045893 GO:GO:0009753 GO:GO:0009611 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0010200
EMBL:AC017118 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0009269
GO:GO:0043619 GO:GO:0051090 eggNOG:NOG295658 GO:GO:0009963
EMBL:X99548 EMBL:AB000875 EMBL:AJ843256 EMBL:AY037203 EMBL:BT003042
EMBL:AF251691 IPI:IPI00543978 PIR:T52293 RefSeq:NP_174541.1
UniGene:At.22648 ProteinModelPortal:Q39204 SMR:Q39204 IntAct:Q39204
STRING:Q39204 PRIDE:Q39204 EnsemblPlants:AT1G32640.1 GeneID:840158
KEGG:ath:AT1G32640 GeneFarm:1895 TAIR:At1g32640 InParanoid:Q39204
KO:K13422 OMA:KRNHPAA PhylomeDB:Q39204 ProtClustDB:CLSN2682813
Genevestigator:Q39204 GermOnline:AT1G32640 GO:GO:2000068
Uniprot:Q39204
Length = 623
Score = 112 (44.5 bits), Expect = 0.00014, P = 0.00014
Identities = 29/89 (32%), Positives = 51/89 (57%)
Query: 106 RKPKRRNIRIS---DDPQS--VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRY 160
++PK+R + + ++P + A R RREK++++ L+ +VP +KMD AS+L +AI Y
Sbjct: 434 KRPKKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAY 493
Query: 161 VKFLKRQIRLLQSNQCNIVGDDHYNKLSL 189
+ LK ++ +S + I KL L
Sbjct: 494 INELKSKVVKTESEKLQIKNQLEEVKLEL 522
>TAIR|locus:2046198 [details] [associations]
symbol:FRU "AT2G28160" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010039 "response to iron ion" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0034756 "regulation of iron ion
transport" evidence=IMP] [GO:0071281 "cellular response to iron
ion" evidence=IEP] [GO:0071369 "cellular response to ethylene
stimulus" evidence=IEP] [GO:0071732 "cellular response to nitric
oxide" evidence=IEP] [GO:0000041 "transition metal ion transport"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0071281 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC005851 GO:GO:0071732 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071369 EMBL:AF488570 EMBL:BT026446 IPI:IPI00547189
PIR:E84681 RefSeq:NP_850114.1 UniGene:At.43510
ProteinModelPortal:Q0V7X4 SMR:Q0V7X4 IntAct:Q0V7X4 STRING:Q0V7X4
PaxDb:Q0V7X4 PRIDE:Q0V7X4 EnsemblPlants:AT2G28160.1 GeneID:817362
KEGG:ath:AT2G28160 TAIR:At2g28160 eggNOG:NOG236355
HOGENOM:HOG000006047 InParanoid:Q0V7X4 OMA:NLKLWIT PhylomeDB:Q0V7X4
ProtClustDB:CLSN2690963 Genevestigator:Q0V7X4 GO:GO:0034756
Uniprot:Q0V7X4
Length = 318
Score = 109 (43.4 bits), Expect = 0.00015, P = 0.00015
Identities = 25/76 (32%), Positives = 42/76 (55%)
Query: 99 DIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAI 158
D TT R + ++ R RR ++ +K+ L+ LVP TKMD AS++ +A+
Sbjct: 111 DSSATTTNNDGTRKTKTDRSRTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAV 170
Query: 159 RYVKFLKRQIRLLQSN 174
YV+ L+ Q + L+S+
Sbjct: 171 LYVQELQSQAKKLKSD 186
>TAIR|locus:2119901 [details] [associations]
symbol:AT4G29100 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL078470
EMBL:AL161574 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF488634 EMBL:AY081316
EMBL:BT000121 IPI:IPI00517615 PIR:T08965 RefSeq:NP_194639.1
UniGene:At.3408 ProteinModelPortal:Q8S3D1 SMR:Q8S3D1 PRIDE:Q8S3D1
EnsemblPlants:AT4G29100.1 GeneID:829031 KEGG:ath:AT4G29100
TAIR:At4g29100 eggNOG:NOG272582 HOGENOM:HOG000005841
InParanoid:Q9SZD9 OMA:PDRSSEC PhylomeDB:Q8S3D1
ProtClustDB:CLSN2915796 Genevestigator:Q8S3D1 Uniprot:Q8S3D1
Length = 407
Score = 110 (43.8 bits), Expect = 0.00015, P = 0.00015
Identities = 30/81 (37%), Positives = 47/81 (58%)
Query: 91 RIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDT 150
R + ++I +T +KP+ ++ S QS + R+EK+ +I L +LV K DT
Sbjct: 233 RSSECNSLEIGGSTNKKPR---LQPSPSSQSTL-KVRKEKLGGRIAALHQLVSPFGKTDT 288
Query: 151 ASMLDEAIRYVKFLKRQIRLL 171
AS+L EAI Y++FL+ QI L
Sbjct: 289 ASVLSEAIGYIRFLQSQIEAL 309
>UNIPROTKB|Q948Y2 [details] [associations]
symbol:Plw-OSB2 "R-type basic helix-loop-helix protein"
species:4530 "Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 HOGENOM:HOG000237985 EMBL:AB021080
ProteinModelPortal:Q948Y2 Gramene:Q948Y2 Genevestigator:Q948Y2
Uniprot:Q948Y2
Length = 451
Score = 110 (43.8 bits), Expect = 0.00018, P = 0.00018
Identities = 22/53 (41%), Positives = 38/53 (71%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSN 174
++ R RREK++E IL+ L+P K+D AS+L E I Y+K L+++++ L+S+
Sbjct: 381 MSERRRREKLNEMFLILKSLLPSVRKVDKASILAETITYLKVLEKRVKELESS 433
>TAIR|locus:2141055 [details] [associations]
symbol:MYC4 "AT4G17880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0003677 GO:GO:0009718
GO:GO:0003700 GO:GO:0006351 EMBL:AL161547 EMBL:AL021889
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 eggNOG:NOG295658
ProtClustDB:CLSN2686023 EMBL:AF251689 EMBL:AK221507 IPI:IPI00540927
PIR:T05074 RefSeq:NP_193522.1 UniGene:At.28316
ProteinModelPortal:O49687 SMR:O49687 EnsemblPlants:AT4G17880.1
GeneID:827511 KEGG:ath:AT4G17880 TAIR:At4g17880 InParanoid:O49687
OMA:SCERARQ PhylomeDB:O49687 Genevestigator:O49687 Uniprot:O49687
Length = 589
Score = 111 (44.1 bits), Expect = 0.00018, P = 0.00018
Identities = 27/83 (32%), Positives = 53/83 (63%)
Query: 98 VDIDPTTIRKPKRRNIRIS---DDPQS--VAARHRREKISEKIRILQRLVPGGTKMDTAS 152
V ++P +KP++R + + ++P + A R RREK++++ L+ +VP +KMD AS
Sbjct: 392 VVVEPE--KKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKAS 449
Query: 153 MLDEAIRYVKFLKRQIRLLQSNQ 175
+L +AI Y+ LK +++ +S++
Sbjct: 450 LLGDAISYISELKSKLQKAESDK 472
>UNIPROTKB|Q2QMM0 [details] [associations]
symbol:LOC_Os12g40710 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 Gramene:Q2QMM0 Uniprot:Q2QMM0
Length = 266
Score = 107 (42.7 bits), Expect = 0.00019, P = 0.00019
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 121 SVAARHRREKISEKIRILQRLVPG-GTKMDTASMLDEAIRYVKFLKRQI 168
++ + RR KI+E+ R LQRLVPG K + AS LD+ I+Y+K L+ Q+
Sbjct: 88 NLTEKRRRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQHQL 136
>TAIR|locus:2128931 [details] [associations]
symbol:AT4G30180 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003700
EMBL:AL161576 EMBL:AL109796 EMBL:BT010671 EMBL:BT010967
IPI:IPI00536557 PIR:T14078 RefSeq:NP_194747.1 UniGene:At.31852
ProteinModelPortal:Q9SUM5 SMR:Q9SUM5 EnsemblPlants:AT4G30180.1
GeneID:829141 KEGG:ath:AT4G30180 TAIR:At4g30180 eggNOG:NOG288957
HOGENOM:HOG000029164 InParanoid:Q9SUM5 OMA:CLELQTI PhylomeDB:Q9SUM5
ProtClustDB:CLSN2685609 Genevestigator:Q9SUM5 Uniprot:Q9SUM5
Length = 158
Score = 101 (40.6 bits), Expect = 0.00023, P = 0.00023
Identities = 25/73 (34%), Positives = 38/73 (52%)
Query: 101 DPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRY 160
+PTT IRI + P + I E++R L++L+PGG +M+ ML E Y
Sbjct: 81 NPTTTTSSSSDGIRILERPDKEGG-NEEGGIEERLRELKKLLPGGEEMNVEEMLSEIGNY 139
Query: 161 VKFLKRQIRLLQS 173
+K L+ Q L+S
Sbjct: 140 IKCLELQTIALKS 152
>TAIR|locus:2199216 [details] [associations]
symbol:AT1G27660 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AC012375 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:BX814188 IPI:IPI00523952 PIR:F86401 RefSeq:NP_174087.1
UniGene:At.49924 ProteinModelPortal:Q9SFZ3 SMR:Q9SFZ3 PaxDb:Q9SFZ3
PRIDE:Q9SFZ3 EnsemblPlants:AT1G27660.1 GeneID:839658
KEGG:ath:AT1G27660 TAIR:At1g27660 eggNOG:NOG274631
HOGENOM:HOG000095222 InParanoid:Q9SFZ3 OMA:MKSSRNK PhylomeDB:Q9SFZ3
ProtClustDB:CLSN2679312 Genevestigator:Q9SFZ3 Uniprot:Q9SFZ3
Length = 453
Score = 109 (43.4 bits), Expect = 0.00027, P = 0.00027
Identities = 30/66 (45%), Positives = 41/66 (62%)
Query: 106 RKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
+KP+ + R S P V R+EK+ ++I LQ+LV K DTAS+L EAI Y+KFL+
Sbjct: 318 KKPRVES-RSSCPPFKV----RKEKLGDRIAALQQLVSPFGKTDTASVLMEAIGYIKFLQ 372
Query: 166 RQIRLL 171
QI L
Sbjct: 373 SQIETL 378
>TAIR|locus:2130619 [details] [associations]
symbol:AT4G16430 "AT4G16430" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:Z97341 EMBL:AL161544
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251688 EMBL:AF428368
EMBL:AY057626 EMBL:BT002301 IPI:IPI00546344 PIR:A71431
RefSeq:NP_193376.1 UniGene:At.33082 UniGene:At.4413
ProteinModelPortal:O23487 SMR:O23487 STRING:O23487 PaxDb:O23487
PRIDE:O23487 EnsemblPlants:AT4G16430.1 GeneID:827337
KEGG:ath:AT4G16430 TAIR:At4g16430 eggNOG:NOG246663
InParanoid:O23487 OMA:RSMSINF PhylomeDB:O23487
ProtClustDB:CLSN2685658 Genevestigator:O23487 Uniprot:O23487
Length = 467
Score = 109 (43.4 bits), Expect = 0.00028, P = 0.00028
Identities = 24/78 (30%), Positives = 49/78 (62%)
Query: 103 TTIRKPKRRNIRISDDPQSV-----AARHRREKISEKIRILQRLVPGGTKMDTASMLDEA 157
T +KP++R + ++ + A R RREK++++ L+ +VP +KMD AS+L +A
Sbjct: 299 TDEQKPRKRGRKPANGREEALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADA 358
Query: 158 IRYVKFLKRQIRLLQSNQ 175
I Y+ ++++IR+ ++ +
Sbjct: 359 ITYITDMQKKIRVYETEK 376
>TAIR|locus:2204898 [details] [associations]
symbol:HFR1 "AT1G02340" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009585 "red, far-red light
phototransduction" evidence=TAS] [GO:0009642 "response to light
intensity" evidence=IEP] [GO:0009785 "blue light signaling pathway"
evidence=TAS] [GO:0003712 "transcription cofactor activity"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009738
"abscisic acid mediated signaling pathway" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0003712
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC064879
GO:GO:0009642 GO:GO:0009785 EMBL:AF288287 EMBL:AF324245
EMBL:AF323182 EMBL:AK117248 IPI:IPI00545685 PIR:G86153
RefSeq:NP_563650.1 UniGene:At.24795 ProteinModelPortal:Q9FE22
SMR:Q9FE22 IntAct:Q9FE22 STRING:Q9FE22 PRIDE:Q9FE22
EnsemblPlants:AT1G02340.1 GeneID:839300 KEGG:ath:AT1G02340
TAIR:At1g02340 eggNOG:NOG274868 HOGENOM:HOG000112891 OMA:FSSHAMR
PhylomeDB:Q9FE22 ProtClustDB:CLSN2916946 Genevestigator:Q9FE22
GermOnline:AT1G02340 Uniprot:Q9FE22
Length = 292
Score = 106 (42.4 bits), Expect = 0.00034, P = 0.00034
Identities = 22/49 (44%), Positives = 34/49 (69%)
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
R R EK+S K+R LQ+LVP K D S+LD+ I Y+K L+ Q++++ +
Sbjct: 144 RRRDEKMSNKMRKLQQLVPNCHKTDKVSVLDKTIEYMKNLQLQLQMMST 192
>UNIPROTKB|Q2R3F6 [details] [associations]
symbol:Os11g0523700 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000010 EMBL:AP008217 GO:GO:0050826
GO:GO:0010440 Gene3D:4.10.280.10 SUPFAM:SSF47459
RefSeq:NP_001067987.2 UniGene:Os.56356
EnsemblPlants:LOC_Os11g32100.1 GeneID:4350609 KEGG:osa:4350609
OMA:DGKDSNA Uniprot:Q2R3F6
Length = 524
Score = 105 (42.0 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 22/52 (42%), Positives = 39/52 (75%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
+A R RR+K+++++ +L+ +VP +KMD AS+L +AI Y+K L ++I LQ+
Sbjct: 339 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQKINDLQN 390
Score = 36 (17.7 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 10/23 (43%), Positives = 11/23 (47%)
Query: 97 PVDIDPTTIRKPK-RRNIRISDD 118
PV PT +K RRN DD
Sbjct: 235 PVGAQPTLFQKRALRRNAGEDDD 257
>TAIR|locus:2163163 [details] [associations]
symbol:PIF7 "AT5G61270" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009416
"response to light stimulus" evidence=IDA] [GO:0009704
"de-etiolation" evidence=IMP] [GO:0016607 "nuclear speck"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016607
GO:GO:0003700 GO:GO:0006351 GO:GO:0003690 GO:GO:0009585
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB010073 HSSP:P22415
GO:GO:0009704 EMBL:AF488604 EMBL:BX831447 EMBL:AY568656
EMBL:AJ630484 EMBL:AK220640 IPI:IPI00537261 IPI:IPI00656604
RefSeq:NP_001032117.1 RefSeq:NP_200935.2 UniGene:At.29114
ProteinModelPortal:Q570R7 SMR:Q570R7 IntAct:Q570R7 STRING:Q570R7
EnsemblPlants:AT5G61270.1 GeneID:836248 KEGG:ath:AT5G61270
TAIR:At5g61270 eggNOG:NOG286182 HOGENOM:HOG000097081
InParanoid:Q9FLK6 OMA:HNESERR PhylomeDB:Q570R7
ProtClustDB:CLSN2681114 Genevestigator:Q570R7 Uniprot:Q570R7
Length = 366
Score = 106 (42.4 bits), Expect = 0.00052, P = 0.00052
Identities = 20/54 (37%), Positives = 39/54 (72%)
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNI 178
R RR++I++++R LQ+L+P +K D S+LD+ I ++K L+ Q++ + S + N+
Sbjct: 176 RRRRDRINQRMRTLQKLLPTASKADKVSILDDVIEHLKQLQAQVQFM-SLRANL 228
>UNIPROTKB|Q336P5 [details] [associations]
symbol:Os10g0575000 "Os10g0575000 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 eggNOG:NOG295658 KO:K13422 RefSeq:NP_001065478.1
UniGene:Os.100484 STRING:Q336P5 GeneID:4349484 KEGG:osa:4349484
ProtClustDB:CLSN2698296 Uniprot:Q336P5
Length = 699
Score = 108 (43.1 bits), Expect = 0.00066, P = 0.00066
Identities = 24/79 (30%), Positives = 50/79 (63%)
Query: 102 PTTIRKPKRRNIRIS---DDPQS--VAARHRREKISEKIRILQRLVPGGTKMDTASMLDE 156
P ++P++R + + ++P + A R RREK++++ L+ +VP +KMD AS+L +
Sbjct: 502 PEAEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGD 561
Query: 157 AIRYVKFLKRQIRLLQSNQ 175
AI Y+ L+ ++ L++++
Sbjct: 562 AISYINELRGKLTALETDK 580
>UNIPROTKB|Q6ESL3 [details] [associations]
symbol:OJ1294_G06.8 "DNA binding protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005093 ProteinModelPortal:Q6ESL3
EnsemblPlants:LOC_Os09g24490.1 KEGG:dosa:Os09t0410700-00
Gramene:Q6ESL3 OMA:RRHECIA Uniprot:Q6ESL3
Length = 363
Score = 105 (42.0 bits), Expect = 0.00069, P = 0.00069
Identities = 27/65 (41%), Positives = 37/65 (56%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNIVG 180
S A R RR++I+ + L+ L+P TK D AS+L E I +VK LKRQ + + G
Sbjct: 111 SEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKELKRQTTAIAAAAA--AG 168
Query: 181 DDHYN 185
D H N
Sbjct: 169 DYHGN 173
>TAIR|locus:2012393 [details] [associations]
symbol:AT1G68810 "AT1G68810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC011914 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AY072161 EMBL:AY122983
IPI:IPI00517468 PIR:H96712 RefSeq:NP_564944.1 UniGene:At.46879
HSSP:P22415 ProteinModelPortal:Q9S7Y1 SMR:Q9S7Y1
EnsemblPlants:AT1G68810.1 GeneID:843213 KEGG:ath:AT1G68810
TAIR:At1g68810 eggNOG:NOG328059 HOGENOM:HOG000243133
InParanoid:Q9S7Y1 OMA:FVIKASL PhylomeDB:Q9S7Y1
ProtClustDB:CLSN2689090 Genevestigator:Q9S7Y1 Uniprot:Q9S7Y1
Length = 368
Score = 105 (42.0 bits), Expect = 0.00071, P = 0.00071
Identities = 24/59 (40%), Positives = 39/59 (66%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNIV 179
S A R RRE+I+ + L+ ++P TK D AS+L E I++VK LKR+ ++ ++ N+V
Sbjct: 179 SEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELKRETSVI--SETNLV 235
>TAIR|locus:2083460 [details] [associations]
symbol:AT3G20640 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000241059 EMBL:AP002034 EMBL:AK118054 EMBL:BT008580
IPI:IPI00530194 RefSeq:NP_188700.1 UniGene:At.38202
ProteinModelPortal:Q8GXT3 SMR:Q8GXT3 EnsemblPlants:AT3G20640.1
GeneID:821611 KEGG:ath:AT3G20640 TAIR:At3g20640 eggNOG:NOG253493
InParanoid:Q8GXT3 OMA:YDQMASA PhylomeDB:Q8GXT3
ProtClustDB:CLSN2915619 Genevestigator:Q8GXT3 Uniprot:Q8GXT3
Length = 454
Score = 106 (42.4 bits), Expect = 0.00072, P = 0.00072
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 127 RREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
R+EK+ ++I LQ+LV K D AS+L EAI Y+KFL +Q+ L +
Sbjct: 346 RKEKMGDRIAALQQLVSPFGKTDAASVLSEAIEYIKFLHQQVSALSN 392
>TAIR|locus:2205455 [details] [associations]
symbol:BIM2 "AT1G69010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC011665 EMBL:BT002352 EMBL:AY080650 EMBL:AY086798
EMBL:AF488627 IPI:IPI00519398 PIR:E96714 RefSeq:NP_177064.1
UniGene:At.35458 ProteinModelPortal:Q9CAA4 SMR:Q9CAA4 PaxDb:Q9CAA4
PRIDE:Q9CAA4 EnsemblPlants:AT1G69010.1 GeneID:843233
KEGG:ath:AT1G69010 TAIR:At1g69010 eggNOG:NOG246683
HOGENOM:HOG000070523 InParanoid:Q9CAA4 OMA:YVQYLQE PhylomeDB:Q9CAA4
ProtClustDB:CLSN2682349 Genevestigator:Q9CAA4 GermOnline:AT1G69010
Uniprot:Q9CAA4
Length = 311
Score = 104 (41.7 bits), Expect = 0.00075, P = 0.00075
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGT-KMDTASMLDEAIRYVKFLKRQIR 169
SV + RR KI+E+ +IL+ L+P K DTAS L E I YV++L+ +++
Sbjct: 51 SVTEQRRRSKINERFQILRELIPNSEQKRDTASFLLEVIDYVQYLQEKVQ 100
>TAIR|locus:2099004 [details] [associations]
symbol:PAR2 "PHY RAPIDLY REGULATED 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0009641 "shade avoidance" evidence=IEP;IMP] [GO:0032502
"developmental process" evidence=IMP] [GO:0007623 "circadian
rhythm" evidence=IEP] GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0007623 GO:GO:0009641 GO:GO:0032502
EMBL:AL353032 EMBL:BT011205 EMBL:BT012139 EMBL:AK229232
EMBL:AM905847 IPI:IPI00517208 PIR:T49168 RefSeq:NP_191444.1
ProteinModelPortal:Q9LXR7 SMR:Q9LXR7 STRING:Q9LXR7
EnsemblPlants:AT3G58850.1 GeneID:825054 KEGG:ath:AT3G58850
TAIR:At3g58850 eggNOG:NOG299543 HOGENOM:HOG000153160
InParanoid:Q9LXR7 OMA:LATSHTK PhylomeDB:Q9LXR7
ProtClustDB:CLSN2684867 Genevestigator:Q9LXR7 Uniprot:Q9LXR7
Length = 118
Score = 86 (35.3 bits), Expect = 0.00077, P = 0.00077
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 109 KRRNIRISDDPQSVAAR------HRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVK 162
+R R+SD SV+ E + EKI LQ +VPGGT++ ++ +E Y+
Sbjct: 31 RRTRQRLSDATASVSETDVEDEDEDEEGVEEKIEALQTIVPGGTELGVDALFEETASYIL 90
Query: 163 FLKRQIRLLQ 172
L+ QI ++
Sbjct: 91 ALQCQINAIK 100
>TAIR|locus:504954829 [details] [associations]
symbol:GL3 "AT5G41315" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0010091 "trichome branching" evidence=IMP]
[GO:0001708 "cell fate specification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0009957 "epidermal cell fate
specification" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215
GO:GO:0010091 HSSP:P61244 EMBL:AB006707 eggNOG:NOG320411
HOGENOM:HOG000237985 ProtClustDB:CLSN2682588 GO:GO:0009957
EMBL:AF246291 IPI:IPI00543830 RefSeq:NP_680372.1 UniGene:At.27204
ProteinModelPortal:Q9FN69 SMR:Q9FN69 IntAct:Q9FN69 STRING:Q9FN69
EnsemblPlants:AT5G41315.1 GeneID:834133 KEGG:ath:AT5G41315
TAIR:At5g41315 InParanoid:Q9FN69 OMA:ERTSANC PhylomeDB:Q9FN69
Genevestigator:Q9FN69 Uniprot:Q9FN69
Length = 637
Score = 107 (42.7 bits), Expect = 0.00080, P = 0.00080
Identities = 19/53 (35%), Positives = 38/53 (71%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
+V + RREK++E+ L++++P K+D S+LD+ I Y++ L+R+++ L+S
Sbjct: 443 AVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELES 495
>UNIPROTKB|Q6K7V4 [details] [associations]
symbol:P0017G06.33 "Ethylene-responsive family
protein-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP004770
EMBL:AP005536 KEGG:dosa:Os02t0276900-01 Uniprot:Q6K7V4
Length = 397
Score = 105 (42.0 bits), Expect = 0.00080, P = 0.00080
Identities = 24/55 (43%), Positives = 33/55 (60%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
P + R+EK+ ++I L +LV K DTAS+L EAI Y++FL QI L S
Sbjct: 231 PAQATVKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLHGQIEALSS 285
>TAIR|locus:2199307 [details] [associations]
symbol:AT1G68240 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009686 "gibberellin biosynthetic process" evidence=RCA]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA] [GO:0016114 "terpenoid biosynthetic process"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC016447
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AJ577585 EMBL:AY735551
EMBL:AY735552 EMBL:AY924719 IPI:IPI00528459 IPI:IPI00657054
IPI:IPI00919318 PIR:H96705 RefSeq:NP_001031251.1 RefSeq:NP_176991.2
UniGene:At.35550 ProteinModelPortal:Q5XVH0 SMR:Q5XVH0
EnsemblPlants:AT1G68240.1 GeneID:843153 KEGG:ath:AT1G68240
TAIR:At1g68240 eggNOG:NOG270610 HOGENOM:HOG000095221 OMA:EGTHEEE
PhylomeDB:Q5XVH0 ProtClustDB:CLSN2681409 Genevestigator:Q5XVH0
Uniprot:Q5XVH0
Length = 185
Score = 99 (39.9 bits), Expect = 0.00096, P = 0.00096
Identities = 26/72 (36%), Positives = 42/72 (58%)
Query: 101 DPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGG-TKMDTASMLDEAIR 159
D + R KR+ S + + + + RR++I +K+ ILQ L+P TK D AS L+ I
Sbjct: 56 DEESYRMAKRQR---SMEYRMMMEKKRRKEIKDKVDILQGLMPNHCTKPDLASKLENIIE 112
Query: 160 YVKFLKRQIRLL 171
Y+K LK Q+ ++
Sbjct: 113 YIKSLKYQVDVM 124
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.138 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 236 162 0.00079 107 3 11 22 0.46 31
30 0.44 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 144
No. of states in DFA: 557 (59 KB)
Total size of DFA: 139 KB (2087 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.85u 0.09s 14.94t Elapsed: 00:00:00
Total cpu time: 14.85u 0.09s 14.94t Elapsed: 00:00:00
Start: Thu May 9 21:16:26 2013 End: Thu May 9 21:16:26 2013
WARNINGS ISSUED: 1