BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047850
(236 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224083420|ref|XP_002307019.1| predicted protein [Populus trichocarpa]
gi|222856468|gb|EEE94015.1| predicted protein [Populus trichocarpa]
Length = 231
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 139/243 (57%), Positives = 156/243 (64%), Gaps = 38/243 (15%)
Query: 1 MAMEDHQIFHHDPSAFSSSSSPSLWPSFNNFPLQTNTQILPSSSRHIIQPSSSTLLFGDH 60
M+MED QI HHD F+S +WPS PLQT +P+SS+ I ST L GD
Sbjct: 16 MSMED-QILHHDQLPFNS-----IWPSC---PLQTQQTQIPASSQTPI----STFL-GDQ 61
Query: 61 NNNNNNNNIIDQEEDEEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQ 120
NN EE++EPEEELGAMKEMMYRIAAMQPV+IDP TIRKPKRRN+RISDDPQ
Sbjct: 62 ICNNTE------EEEDEPEEELGAMKEMMYRIAAMQPVEIDPATIRKPKRRNVRISDDPQ 115
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQ----- 175
SVAAR RRE+ISEKIRILQRLVPGG KMDTASML+EAIRYVKFLKRQIRLLQ N
Sbjct: 116 SVAARLRRERISEKIRILQRLVPGGRKMDTASMLEEAIRYVKFLKRQIRLLQPNHHQQHQ 175
Query: 176 -CNIVGDDH--YNKLSLGATTNTTIATTTASASAAGALDPILGHSLPFHGNRNSSFYFNH 232
C GD Y+ L + T T + AG L ILG GN + +
Sbjct: 176 PCTTNGDWQIPYSNKPLDSIT----TTPSLLEPRAGGLGYILG------GNTGGNPLCFN 225
Query: 233 HEV 235
HEV
Sbjct: 226 HEV 228
>gi|356528585|ref|XP_003532880.1| PREDICTED: uncharacterized protein LOC100777351 [Glycine max]
Length = 271
Score = 199 bits (507), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 130/227 (57%), Positives = 150/227 (66%), Gaps = 20/227 (8%)
Query: 24 LWP--SFNNFPLQTNTQILPSSSRHIIQPSSSTLLFGDHNNNNNNNNIIDQEEDEEPEEE 81
+WP ++ N T +SS I+ PSSS+ GD ++N EEDEEPEEE
Sbjct: 47 IWPINNYQNLLQMHQTPNTTTSSTVIVPPSSSSGFLGDILGVHHN-----LEEDEEPEEE 101
Query: 82 LGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRL 141
LGAMKEMMY+IAAMQPVDIDP TIRKPKRRN+RISDDPQSVAARHRRE+ISEKIRILQRL
Sbjct: 102 LGAMKEMMYKIAAMQPVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRL 161
Query: 142 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS--------NQCNIVGDD--HYNKLSLGA 191
VPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS QC V H + L L
Sbjct: 162 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSIPQPSRQPPQCIGVASTTPHASTLLLAP 221
Query: 192 TTNTTIATTTASASAAGALDPILGHSLPFHGNRNS---SFYFNHHEV 235
+++ A S A + + L F G+ ++ S FNHHEV
Sbjct: 222 SSDWPFAPNVLPRSTAVSASMDMSAGLGFDGHAHACDGSSSFNHHEV 268
>gi|356511167|ref|XP_003524301.1| PREDICTED: uncharacterized protein LOC100775296 [Glycine max]
Length = 266
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/232 (57%), Positives = 149/232 (64%), Gaps = 32/232 (13%)
Query: 24 LWPSFNNFPLQTNTQILPSSSRHIIQPS-SSTLLFGDHNNNNNNNNIIDQEEDEEPEEEL 82
+WPS N L Q +++ II P SS+ GD +N EEDEEPEEEL
Sbjct: 44 IWPSNNYHNLLQMHQTPNTTTLSIIAPPPSSSGFLGDILGVHN------LEEDEEPEEEL 97
Query: 83 GAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLV 142
GAMKEMMY+IAAMQPVDIDP TIRKPKRRN+RISDDPQSVAARHRRE+ISEKIRILQRLV
Sbjct: 98 GAMKEMMYKIAAMQPVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLV 157
Query: 143 PGGTKMDTASMLDEAIRYVKFLKRQIRLLQS-------NQCNIVG--DDHYNKLSLGATT 193
PGGTKMDTASMLDEAIRYVKFLKRQIRLLQS QC V H + L L +
Sbjct: 158 PGGTKMDTASMLDEAIRYVKFLKRQIRLLQSIPQSSNPPQCIGVATTSHHASTLLLAPSC 217
Query: 194 N----------TTIATTTASASAAGALDPILGHSLPFHGNRNSSFYFNHHEV 235
+ +T AT + SA D +GH+ G S FNHHEV
Sbjct: 218 DWPFAPNVLPSSTAATASMDMSAGLGFD--VGHAHACDG----SSSFNHHEV 263
>gi|452030238|gb|AGF92088.1| indehiscent-like protein [Phaseolus vulgaris]
Length = 282
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 109/173 (63%), Positives = 122/173 (70%), Gaps = 16/173 (9%)
Query: 79 EEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRIL 138
EEELGAMKEMMY+IAAMQPVDIDP TIRKPKRRN+RISDDPQSVAARHRRE+ISEKIRIL
Sbjct: 107 EEELGAMKEMMYKIAAMQPVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRIL 166
Query: 139 QRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS-------NQCNIVGDDHYNKLSLGA 191
QRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS QC + N L L
Sbjct: 167 QRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSISHPSQPPQCIGFATTNANTLLLAP 226
Query: 192 TT------NTTIATTTASASAAGALDPILGHSLPFHGNR---NSSFYFNHHEV 235
+ N +++T +A+ A + + L F G + S FN HEV
Sbjct: 227 SCDWSFAPNVLLSSTAVTAATASSSSLDMPGGLGFDGRGHACDGSSSFNQHEV 279
>gi|449461837|ref|XP_004148648.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
gi|449524665|ref|XP_004169342.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 223
Score = 186 bits (473), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 109/154 (70%), Positives = 120/154 (77%), Gaps = 22/154 (14%)
Query: 23 SLWPSFNNFPLQTN-TQILPSSSRHII----QPSSSTLLFGDHNNNNNNNNIIDQEEDEE 77
S+WPSF F L + Q LP+SS H + PSS T GD ++EE
Sbjct: 35 SIWPSFLPFQLSDHHDQQLPTSSTHFVIGYSTPSSGT---GD--------------DEEE 77
Query: 78 PEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRI 137
PEEELGAMKEMMY+IAAMQPVDIDP+TIRKPKRRN+RISDDPQS+AAR RRE+ISEKIRI
Sbjct: 78 PEEELGAMKEMMYKIAAMQPVDIDPSTIRKPKRRNVRISDDPQSIAARLRRERISEKIRI 137
Query: 138 LQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
LQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL
Sbjct: 138 LQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
>gi|223702410|gb|ACN21636.1| putative basic helix-loop-helix protein BHLH12 [Lotus japonicus]
Length = 247
Score = 186 bits (472), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 118/220 (53%), Positives = 142/220 (64%), Gaps = 33/220 (15%)
Query: 40 LPSSSRHIIQPSSSTL--LFGDHNNNNNNNNIIDQEEDEEPEEELGAMKEMMYRIAAMQP 97
+PSSS I SS +L + G H+ I++ E+E+ EEELGAMKEMMY+IAAMQP
Sbjct: 30 MPSSSNTITPSSSGSLSDILGVHS--------IEEGEEEQEEEELGAMKEMMYKIAAMQP 81
Query: 98 VDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEA 157
VDIDP TIR+PKRRN+RISDDP SVAARHRRE+ISEKIRILQRLVPGGTKMDTASMLDEA
Sbjct: 82 VDIDPATIRRPKRRNVRISDDPASVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEA 141
Query: 158 IRYVKFLKRQIRLLQSNQCNIVGDDHYNK-LSLGATTNTT-------------------- 196
IRYVKFLKRQIRLLQS + + +G+TT
Sbjct: 142 IRYVKFLKRQIRLLQSTTPQHHPPPQPPQCVGIGSTTGAPLLPPSTLLLAPSFDWPFAPN 201
Query: 197 -IATTTASASAAGALDPILGHSLPFHGNR-NSSFYFNHHE 234
+ ++TA+ A + LG HG+ ++S FNHHE
Sbjct: 202 LLLSSTATTVVATNMPARLGIEAVGHGHACDASSSFNHHE 241
>gi|357519927|ref|XP_003630252.1| Transcription factor HEC3 [Medicago truncatula]
gi|355524274|gb|AET04728.1| Transcription factor HEC3 [Medicago truncatula]
Length = 275
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 86/92 (93%), Positives = 91/92 (98%)
Query: 82 LGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRL 141
LGAMKEMMY+IAAMQPVDIDP TIRKPKRRN+RIS+DPQSVAARHRRE+ISEKIRILQRL
Sbjct: 87 LGAMKEMMYKIAAMQPVDIDPATIRKPKRRNVRISEDPQSVAARHRRERISEKIRILQRL 146
Query: 142 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
VPGGTKMDTASMLDEAIRYVKFLKRQI+LLQS
Sbjct: 147 VPGGTKMDTASMLDEAIRYVKFLKRQIKLLQS 178
>gi|225431517|ref|XP_002275141.1| PREDICTED: transcription factor HEC3-like [Vitis vinifera]
Length = 199
Score = 183 bits (464), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 119/203 (58%), Positives = 140/203 (68%), Gaps = 21/203 (10%)
Query: 5 DHQIFHHDPSAFSSSSSPSLWPSFNNFPLQTNTQILPSSSRHIIQPSSSTLLFGDHNNNN 64
+ QI H F ++WP NFPL T+ +++ S+++L GD N
Sbjct: 2 EEQILHDHHLPFD-----AVWP---NFPLPTHNI---TAAASSSSQISASVLLGDQMGNL 50
Query: 65 NNNNIIDQEEDEEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAA 124
+ EEPEEELGAMKEMMY+IAAMQPVDIDP TIRKPKRRN+RISDDPQSVAA
Sbjct: 51 LEED-------EEPEEELGAMKEMMYKIAAMQPVDIDPATIRKPKRRNVRISDDPQSVAA 103
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNIVGDDHY 184
RHRRE+ISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIR LQSN + + D
Sbjct: 104 RHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRQLQSNH-HPLPTDVT 162
Query: 185 NKLSL--GATTNTTIATTTASAS 205
LS A T+T + +T+S+S
Sbjct: 163 ACLSTPDWAVTSTKLLGSTSSSS 185
>gi|224095942|ref|XP_002310509.1| predicted protein [Populus trichocarpa]
gi|222853412|gb|EEE90959.1| predicted protein [Populus trichocarpa]
Length = 101
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/99 (88%), Positives = 93/99 (93%)
Query: 76 EEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKI 135
+EPEEELGAMKEMMYR+AAMQPVDIDP TI KPKR+N+RISDDPQSVAAR RRE+ISEKI
Sbjct: 1 DEPEEELGAMKEMMYRVAAMQPVDIDPATIHKPKRKNVRISDDPQSVAARLRRERISEKI 60
Query: 136 RILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSN 174
RILQRLVPGG KMDTASMLDEAIRYVKFLKRQIR LQ N
Sbjct: 61 RILQRLVPGGRKMDTASMLDEAIRYVKFLKRQIRSLQPN 99
>gi|356507477|ref|XP_003522492.1| PREDICTED: uncharacterized protein LOC100779374 [Glycine max]
Length = 243
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/183 (57%), Positives = 121/183 (66%), Gaps = 19/183 (10%)
Query: 1 MAMEDHQIFHHDPSAFSSSSSPSLWPSFNNFPLQTNTQILPSSSRHIIQPSSSTLLFGDH 60
M E+H I HD +WP +N +PL N Q SS+ + T + G H
Sbjct: 24 MGTEEHNIILHDHHQIPKGVG--IWPHYN-YPLH-NIQPSSSSNVAPSSSNFLTDILGVH 79
Query: 61 NNNNNNNNIIDQEEDEEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQ 120
+ EEELGAMKEMMY++A MQPVDIDP ++RKPKRRN+RISDDPQ
Sbjct: 80 FEEEEDEE----------EEELGAMKEMMYKMAVMQPVDIDPASVRKPKRRNVRISDDPQ 129
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSN-----Q 175
SVAARHRRE+ISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIR LQS
Sbjct: 130 SVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRFLQSTPPPPIN 189
Query: 176 CNI 178
CN+
Sbjct: 190 CNV 192
>gi|223702412|gb|ACN21637.1| putative basic helix-loop-helix protein BHLH13 [Lotus japonicus]
Length = 262
Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 111/171 (64%), Gaps = 26/171 (15%)
Query: 82 LGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRL 141
LGAMKEMMY+IA MQPVDIDP IRKPKR+N+RISDDPQSVAARHRRE+ISEKIRILQRL
Sbjct: 98 LGAMKEMMYKIAVMQPVDIDPAAIRKPKRKNVRISDDPQSVAARHRRERISEKIRILQRL 157
Query: 142 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS---------------NQCNIVGDDHYNK 186
VPGGTKMDTASMLDEAI YVKFLKRQIRLLQS CN+ G +
Sbjct: 158 VPGGTKMDTASMLDEAIHYVKFLKRQIRLLQSTPNSQHHQQHPPPTPTSCNVPG---FTS 214
Query: 187 LSLGATTNTT--IATTTASASAAGALDPILGHSLPFHGNRNSSFYFNHHEV 235
ATT + A T + LGH + G+ F HHEV
Sbjct: 215 ELFLATTGSYWPFAPTIVLQGSTTTTTSALGHG--YAGDDG----FKHHEV 259
>gi|413921524|gb|AFW61456.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 288
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/115 (73%), Positives = 99/115 (86%), Gaps = 2/115 (1%)
Query: 60 HNNNNNNNNIIDQEED--EEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISD 117
H N+ + Q E E +EELGAMKEMMYRIAAMQPVDIDP T++KP+RRN+RIS+
Sbjct: 102 HRGNDELEEMRKQHEAAAEHVDEELGAMKEMMYRIAAMQPVDIDPATVKKPRRRNVRISE 161
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
DPQSVAARHRRE+ISE++R+LQRLVPGGTKMDTASMLDEAIRY+KFLKRQ++ LQ
Sbjct: 162 DPQSVAARHRRERISERVRVLQRLVPGGTKMDTASMLDEAIRYIKFLKRQVQELQ 216
>gi|413921523|gb|AFW61455.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 287
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/115 (73%), Positives = 99/115 (86%), Gaps = 2/115 (1%)
Query: 60 HNNNNNNNNIIDQEED--EEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISD 117
H N+ + Q E E +EELGAMKEMMYRIAAMQPVDIDP T++KP+RRN+RIS+
Sbjct: 101 HRGNDELEEMRKQHEAAAEHVDEELGAMKEMMYRIAAMQPVDIDPATVKKPRRRNVRISE 160
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
DPQSVAARHRRE+ISE++R+LQRLVPGGTKMDTASMLDEAIRY+KFLKRQ++ LQ
Sbjct: 161 DPQSVAARHRRERISERVRVLQRLVPGGTKMDTASMLDEAIRYIKFLKRQVQELQ 215
>gi|296088569|emb|CBI37560.3| unnamed protein product [Vitis vinifera]
Length = 136
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/90 (94%), Positives = 88/90 (97%)
Query: 85 MKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPG 144
MKEMMY+IAAMQPVDIDP TIRKPKRRN+RISDDPQSVAARHRRE+ISEKIRILQRLVPG
Sbjct: 1 MKEMMYKIAAMQPVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPG 60
Query: 145 GTKMDTASMLDEAIRYVKFLKRQIRLLQSN 174
GTKMDTASMLDEAIRYVKFLKRQIR LQSN
Sbjct: 61 GTKMDTASMLDEAIRYVKFLKRQIRQLQSN 90
>gi|356518753|ref|XP_003528042.1| PREDICTED: uncharacterized protein LOC100803688 [Glycine max]
Length = 234
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/98 (84%), Positives = 91/98 (92%)
Query: 82 LGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRL 141
LGAMKEMMY++A MQPVDIDP ++RKPKRRN+RISDDPQSVAARHRRE+ISEKIRILQRL
Sbjct: 82 LGAMKEMMYKMAVMQPVDIDPASVRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRL 141
Query: 142 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNIV 179
VPGGTKMDTASMLDEAI YVKFLKRQIRLLQS ++
Sbjct: 142 VPGGTKMDTASMLDEAILYVKFLKRQIRLLQSTSSPLI 179
>gi|414878955|tpg|DAA56086.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 227
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/116 (72%), Positives = 99/116 (85%), Gaps = 2/116 (1%)
Query: 60 HNNNNNNNNIIDQEED--EEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISD 117
H N+ + Q E E +EELGAMKEMMYRIAAMQPVDIDP T++KP+RRN+RIS+
Sbjct: 102 HRGNDELEEMRKQHEAAAEHVDEELGAMKEMMYRIAAMQPVDIDPATVKKPRRRNVRISE 161
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
DPQSVAARHRRE+ISE++R+LQRLVPGGTKMDTASMLDEAIRY+KFLKRQ++ L S
Sbjct: 162 DPQSVAARHRRERISERVRVLQRLVPGGTKMDTASMLDEAIRYIKFLKRQVQELHS 217
>gi|413921522|gb|AFW61454.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 288
Score = 176 bits (446), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 87/128 (67%), Positives = 103/128 (80%), Gaps = 4/128 (3%)
Query: 47 IIQPSSSTLLFGDHNNNNNNNNIIDQEED--EEPEEELGAMKEMMYRIAAMQPVDIDPTT 104
I PSS + G N+ + Q E E +EELGAMKEMMYRIAAMQPVDIDP T
Sbjct: 91 IDDPSSQS--HGHRGNDELEEEMRKQHEAAAEHVDEELGAMKEMMYRIAAMQPVDIDPAT 148
Query: 105 IRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFL 164
++KP+RRN+RIS+DPQSV ARHRRE+ISE++R+LQRLVPGGTKMDTASMLDEAIRY+KFL
Sbjct: 149 VKKPRRRNVRISEDPQSVVARHRRERISERVRVLQRLVPGGTKMDTASMLDEAIRYIKFL 208
Query: 165 KRQIRLLQ 172
KRQ++ LQ
Sbjct: 209 KRQVQELQ 216
>gi|255552420|ref|XP_002517254.1| hypothetical protein RCOM_1461320 [Ricinus communis]
gi|223543625|gb|EEF45154.1| hypothetical protein RCOM_1461320 [Ricinus communis]
Length = 207
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/91 (91%), Positives = 89/91 (97%)
Query: 82 LGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRL 141
LGAMKEMM++IAAMQPV+IDP TI KPKRRN+RISDDPQSVAARHRRE+ISEKIRILQRL
Sbjct: 71 LGAMKEMMFKIAAMQPVNIDPATIYKPKRRNVRISDDPQSVAARHRRERISEKIRILQRL 130
Query: 142 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
VPGGTKMDTASMLDEAIRYVKFLK+QIRLLQ
Sbjct: 131 VPGGTKMDTASMLDEAIRYVKFLKKQIRLLQ 161
>gi|242080239|ref|XP_002444888.1| hypothetical protein SORBIDRAFT_07g000910 [Sorghum bicolor]
gi|241941238|gb|EES14383.1| hypothetical protein SORBIDRAFT_07g000910 [Sorghum bicolor]
Length = 331
Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 89/127 (70%), Positives = 102/127 (80%), Gaps = 3/127 (2%)
Query: 76 EEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKI 135
E+ EEELGAMKEMMYRIAAMQPVDIDP TI+KP+RRN+RIS+DPQSVAARHRRE+ISE+I
Sbjct: 143 EDVEEELGAMKEMMYRIAAMQPVDIDPATIKKPRRRNVRISEDPQSVAARHRRERISERI 202
Query: 136 RILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNIVGDDHYNKLSLGATTNT 195
RILQRLVPGGTKMDTASMLDEAIRY+KFLKRQ++ LQ S GA +T
Sbjct: 203 RILQRLVPGGTKMDTASMLDEAIRYIKFLKRQVQELQHQPSPT---QQQYPASAGAGPST 259
Query: 196 TIATTTA 202
++ A
Sbjct: 260 SVVGVAA 266
>gi|242080237|ref|XP_002444887.1| hypothetical protein SORBIDRAFT_07g000900 [Sorghum bicolor]
gi|241941237|gb|EES14382.1| hypothetical protein SORBIDRAFT_07g000900 [Sorghum bicolor]
Length = 348
Score = 159 bits (403), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 84/97 (86%), Positives = 94/97 (96%)
Query: 76 EEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKI 135
E+ EEELGAMKEMMYRIAAMQPVDIDP TI+KP+RRN+RIS+DPQSVAARHRRE+ISE+I
Sbjct: 160 EDVEEELGAMKEMMYRIAAMQPVDIDPATIKKPRRRNVRISEDPQSVAARHRRERISERI 219
Query: 136 RILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
RILQRLVPGGTKMDTASMLDEAIRY+KFLKRQ++ LQ
Sbjct: 220 RILQRLVPGGTKMDTASMLDEAIRYIKFLKRQVQELQ 256
>gi|293333080|ref|NP_001168866.1| uncharacterized protein LOC100382671 [Zea mays]
gi|223973413|gb|ACN30894.1| unknown [Zea mays]
Length = 335
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/133 (66%), Positives = 105/133 (78%), Gaps = 2/133 (1%)
Query: 76 EEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKI 135
E+ EEELGAMKEMMYRIAAMQPVDIDP TI+KP+RRN+RIS+DPQSVAARHRRE+ISE+I
Sbjct: 145 EDVEEELGAMKEMMYRIAAMQPVDIDPATIKKPRRRNVRISEDPQSVAARHRRERISERI 204
Query: 136 RILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNIVGDDHYNKLSLGATTNT 195
RILQRLVPGGTKMDTASMLDEAIRY+KFLKRQ++ LQ + + GA +T
Sbjct: 205 RILQRLVPGGTKMDTASMLDEAIRYIKFLKRQVQELQHQPPQPQHQQY--PAAAGAGPST 262
Query: 196 TIATTTASASAAG 208
++ + A G
Sbjct: 263 SVVGSAAPGRPGG 275
>gi|449502773|ref|XP_004161738.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 171
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 71/93 (76%), Positives = 85/93 (91%)
Query: 82 LGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRL 141
+ AM+EM++RIAAMQPV+IDP I+ PKRRN+RIS DPQSVAARHRRE+IS+KIRILQRL
Sbjct: 79 MAAMREMIFRIAAMQPVEIDPEAIKAPKRRNVRISKDPQSVAARHRRERISQKIRILQRL 138
Query: 142 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSN 174
VPGGTKMDTASMLDEA+ YVKFLKRQ++ L+ +
Sbjct: 139 VPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQS 171
>gi|357465537|ref|XP_003603053.1| Transcription factor HEC2 [Medicago truncatula]
gi|355492101|gb|AES73304.1| Transcription factor HEC2 [Medicago truncatula]
Length = 271
Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 80/151 (52%), Positives = 104/151 (68%), Gaps = 14/151 (9%)
Query: 49 QPSSSTLLFGDHNNN-NNNNNIIDQEEDEEPEEELGAMKEMMYRIAAMQPVDIDPTTIRK 107
Q ++ L+F + +N N N E + AM+EM++RIAAMQP+ IDP +++
Sbjct: 110 QQQTTPLMFSNSSNEIAPNTNHYGTASPSEKRNSMAAMREMIFRIAAMQPIYIDPESVKP 169
Query: 108 PKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQ 167
PKRRN++IS DPQS+AARHRRE+ISEKIRILQR+VPGGTKMDTASMLDEAI YVKFLK Q
Sbjct: 170 PKRRNVKISKDPQSIAARHRRERISEKIRILQRMVPGGTKMDTASMLDEAIHYVKFLKTQ 229
Query: 168 IRLLQSNQCNIVGDDHYNKLSLGATTNTTIA 198
++ LQ + + GA +N T+A
Sbjct: 230 LKSLQ-------------ERASGANSNRTVA 247
>gi|342298424|emb|CBY05402.1| INDEHISCENT-like protein [Lepidium appelianum]
Length = 172
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/99 (73%), Positives = 86/99 (86%)
Query: 76 EEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKI 135
EE +E++ AMKEM Y IAAMQPVDIDP T+ KP RRN+RISDDPQ+ AR RRE+ISEKI
Sbjct: 52 EEEDEDMDAMKEMQYMIAAMQPVDIDPATVPKPYRRNVRISDDPQTGVARRRRERISEKI 111
Query: 136 RILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSN 174
RIL+R+VPGG KMD+ASMLDEAIRY KFLKRQ+R+LQ +
Sbjct: 112 RILKRIVPGGAKMDSASMLDEAIRYTKFLKRQVRMLQPH 150
>gi|255644916|gb|ACU22958.1| unknown [Glycine max]
Length = 242
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/112 (64%), Positives = 91/112 (81%), Gaps = 4/112 (3%)
Query: 73 EEDEEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKIS 132
E + E + AM+EM++R+A MQP+ IDP +I+ PKRRN++IS DPQSVAARHRRE+IS
Sbjct: 94 EPNLEKRNSVAAMREMIFRVAVMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRRERIS 153
Query: 133 EKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ----SNQCNIVG 180
E+I+ILQRLVPGGTKMDTASMLDEAI YVKFLK+Q++ L+ S N+VG
Sbjct: 154 ERIKILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQAGASRPLNVVG 205
>gi|225458639|ref|XP_002282817.1| PREDICTED: transcription factor HEC1 [Vitis vinifera]
gi|302142304|emb|CBI19507.3| unnamed protein product [Vitis vinifera]
Length = 248
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 71/96 (73%), Positives = 84/96 (87%)
Query: 82 LGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRL 141
+ AM+EM++RIAAMQPV IDP +++ PKRRN++IS DPQSVAARHRRE+ISEKIRILQRL
Sbjct: 118 MAAMREMIFRIAAMQPVHIDPESVKPPKRRNVKISKDPQSVAARHRRERISEKIRILQRL 177
Query: 142 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
VPGGTKMDTASMLDEAI YVKFLK Q++ L+ N
Sbjct: 178 VPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAAN 213
>gi|15242494|ref|NP_196537.1| transcription factor HEC3 [Arabidopsis thaliana]
gi|75311668|sp|Q9LXD8.1|HEC3_ARATH RecName: Full=Transcription factor HEC3; AltName: Full=Basic
helix-loop-helix protein 43; Short=AtbHLH43; Short=bHLH
43; AltName: Full=Protein HECATE 3; AltName:
Full=Transcription factor EN 119; AltName: Full=bHLH
transcription factor bHLH043
gi|7671414|emb|CAB89355.1| putative protein [Arabidopsis thaliana]
gi|9759006|dbj|BAB09533.1| unnamed protein product [Arabidopsis thaliana]
gi|332004059|gb|AED91442.1| transcription factor HEC3 [Arabidopsis thaliana]
Length = 224
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/93 (89%), Positives = 90/93 (96%)
Query: 82 LGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRL 141
LGAMKEMMY+IAAMQ VDIDP T++KPKRRN+RISDDPQSVAARHRRE+ISE+IRILQRL
Sbjct: 92 LGAMKEMMYKIAAMQSVDIDPATVKKPKRRNVRISDDPQSVAARHRRERISERIRILQRL 151
Query: 142 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSN 174
VPGGTKMDTASMLDEAIRYVKFLKRQIRLL +N
Sbjct: 152 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLNNN 184
>gi|15236714|ref|NP_191923.1| transcription factor IND [Arabidopsis thaliana]
gi|209572742|sp|O81313.3|IND_ARATH RecName: Full=Transcription factor IND; AltName: Full=Basic
helix-loop-helix protein 40; Short=AtbHLH40; Short=bHLH
40; AltName: Full=Protein INDEHISCENT; AltName:
Full=Transcription factor EN 120; AltName: Full=bHLH
transcription factor bHLH040
gi|3193315|gb|AAC19297.1| contains similarity to transcriptional activator Ra [Arabidopsis
thaliana]
gi|7267099|emb|CAB80770.1| hypothetical protein [Arabidopsis thaliana]
gi|117958473|gb|ABK59672.1| At4g00120 [Arabidopsis thaliana]
gi|332656425|gb|AEE81825.1| transcription factor IND [Arabidopsis thaliana]
Length = 198
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 71/89 (79%), Positives = 79/89 (88%)
Query: 84 AMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVP 143
AMKEM Y IA MQPVDIDP T+ KP RRN+RISDDPQ+V AR RRE+ISEKIRIL+R+VP
Sbjct: 87 AMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRERISEKIRILKRIVP 146
Query: 144 GGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
GG KMDTASMLDEAIRY KFLKRQ+R+LQ
Sbjct: 147 GGAKMDTASMLDEAIRYTKFLKRQVRILQ 175
>gi|297725985|ref|NP_001175356.1| Os08g0108500 [Oryza sativa Japonica Group]
gi|255678100|dbj|BAH94084.1| Os08g0108500 [Oryza sativa Japonica Group]
Length = 306
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 82/92 (89%), Positives = 90/92 (97%)
Query: 81 ELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQR 140
ELGAMKEMMYRIAAMQPVDIDP TI+KP+RRN+RISDDPQSVAARHRRE+ISE+IRILQR
Sbjct: 129 ELGAMKEMMYRIAAMQPVDIDPATIKKPRRRNVRISDDPQSVAARHRRERISERIRILQR 188
Query: 141 LVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
LVPGGTKMDTASMLDEAIRY+KFLKRQ++ LQ
Sbjct: 189 LVPGGTKMDTASMLDEAIRYIKFLKRQVQELQ 220
>gi|125601936|gb|EAZ41261.1| hypothetical protein OsJ_25770 [Oryza sativa Japonica Group]
Length = 303
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 82/92 (89%), Positives = 90/92 (97%)
Query: 81 ELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQR 140
ELGAMKEMMYRIAAMQPVDIDP TI+KP+RRN+RISDDPQSVAARHRRE+ISE+IRILQR
Sbjct: 126 ELGAMKEMMYRIAAMQPVDIDPATIKKPRRRNVRISDDPQSVAARHRRERISERIRILQR 185
Query: 141 LVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
LVPGGTKMDTASMLDEAIRY+KFLKRQ++ LQ
Sbjct: 186 LVPGGTKMDTASMLDEAIRYIKFLKRQVQELQ 217
>gi|125559887|gb|EAZ05335.1| hypothetical protein OsI_27539 [Oryza sativa Indica Group]
Length = 303
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 82/92 (89%), Positives = 90/92 (97%)
Query: 81 ELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQR 140
ELGAMKEMMYRIAAMQPVDIDP TI+KP+RRN+RISDDPQSVAARHRRE+ISE+IRILQR
Sbjct: 126 ELGAMKEMMYRIAAMQPVDIDPATIKKPRRRNVRISDDPQSVAARHRRERISERIRILQR 185
Query: 141 LVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
LVPGGTKMDTASMLDEAIRY+KFLKRQ++ LQ
Sbjct: 186 LVPGGTKMDTASMLDEAIRYIKFLKRQVQELQ 217
>gi|297810171|ref|XP_002872969.1| EDA33 [Arabidopsis lyrata subsp. lyrata]
gi|297318806|gb|EFH49228.1| EDA33 [Arabidopsis lyrata subsp. lyrata]
Length = 197
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/154 (53%), Positives = 99/154 (64%), Gaps = 27/154 (17%)
Query: 42 SSSRHIIQPSSSTLLFGDHNNNNNNNNIIDQEE-----------DEEPEEEL-------- 82
S R +++P LL + N N++I QE D PE +
Sbjct: 25 SPKRSMMEPQPHQLLM----DWNKANDLITQEHAAFLHDPHLMLDPPPETLIHLEEDEEY 80
Query: 83 ----GAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRIL 138
AMKEM Y IA MQPVDIDP T+ KP RRN++ISDDPQ+V AR RRE+ISEKIRIL
Sbjct: 81 DEDMDAMKEMQYMIAVMQPVDIDPATVPKPNRRNVKISDDPQTVVARRRRERISEKIRIL 140
Query: 139 QRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
+R+VPGG KMDTASMLDEAIRY KFLKRQ+R+LQ
Sbjct: 141 KRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQ 174
>gi|297811073|ref|XP_002873420.1| hypothetical protein ARALYDRAFT_487795 [Arabidopsis lyrata subsp.
lyrata]
gi|297319257|gb|EFH49679.1| hypothetical protein ARALYDRAFT_487795 [Arabidopsis lyrata subsp.
lyrata]
Length = 212
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/89 (91%), Positives = 87/89 (97%)
Query: 83 GAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLV 142
GAMKEMMY+IAAMQ VDIDP T++KPKRRN+RISDDPQSVAARHRRE+ISE+IRILQRLV
Sbjct: 86 GAMKEMMYKIAAMQSVDIDPATVKKPKRRNVRISDDPQSVAARHRRERISERIRILQRLV 145
Query: 143 PGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
PGGTKMDTASMLDEAIRYVKFLKRQIRLL
Sbjct: 146 PGGTKMDTASMLDEAIRYVKFLKRQIRLL 174
>gi|237692500|gb|ACR15952.1| INDEHISCENT [Lepidium campestre]
gi|342298436|emb|CBY05408.1| INDEHISCENT-like protein [Lepidium campestre]
Length = 176
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 70/87 (80%), Positives = 78/87 (89%)
Query: 86 KEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGG 145
KEM Y IAAMQPVDIDP T+ KP RRN+RISDDPQ+V AR RRE+ISEKIRIL+R+VPGG
Sbjct: 66 KEMQYMIAAMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRERISEKIRILKRIVPGG 125
Query: 146 TKMDTASMLDEAIRYVKFLKRQIRLLQ 172
KMDTASMLDEAIRY KFLKRQ+R+LQ
Sbjct: 126 AKMDTASMLDEAIRYTKFLKRQVRILQ 152
>gi|224094310|ref|XP_002310136.1| predicted protein [Populus trichocarpa]
gi|222853039|gb|EEE90586.1| predicted protein [Populus trichocarpa]
Length = 239
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 90/113 (79%), Gaps = 3/113 (2%)
Query: 65 NNNNIIDQEEDEEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAA 124
N N+ + E + P E+ ++M +RIAAMQP+ IDP +++ PKRRN++IS DPQSVAA
Sbjct: 116 NANSFLSSIEKKNPTAEI---RDMTFRIAAMQPIHIDPESVKPPKRRNVKISKDPQSVAA 172
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
RHRRE+ISE++RILQRLVPGGTKMDTASMLDEAI YVKFLK+Q++ L+ N
Sbjct: 173 RHRRERISERMRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEQAGAN 225
>gi|147768917|emb|CAN66981.1| hypothetical protein VITISV_004454 [Vitis vinifera]
Length = 282
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/116 (64%), Positives = 87/116 (75%), Gaps = 3/116 (2%)
Query: 82 LGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRL 141
+ AM+EM++RIAAMQPV IDP +++ PKRRN++IS DPQSVAARHRRE+ISEKIRILQRL
Sbjct: 71 MAAMREMIFRIAAMQPVHIDPESVKPPKRRNVKISKDPQSVAARHRRERISEKIRILQRL 130
Query: 142 VPGGTKMDTASMLDEAIRYVKFLKRQI---RLLQSNQCNIVGDDHYNKLSLGATTN 194
VPGGTKMDTASMLDEAI YV FLK Q R + Q +GD K G N
Sbjct: 131 VPGGTKMDTASMLDEAIHYVXFLKTQTEWPRTTCTQQSVFLGDVRETKRKHGKPGN 186
>gi|288901045|gb|ADC68235.1| bHLH transcription factor [Brassica rapa subsp. pekinensis]
Length = 171
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 67/89 (75%), Positives = 78/89 (87%)
Query: 82 LGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRL 141
+ MK+M Y IAAMQPVD+DP T+ KP RRN+R+SDDPQ+V AR RRE+ISEKIRIL+R+
Sbjct: 70 MDPMKKMQYAIAAMQPVDLDPATVPKPNRRNVRVSDDPQTVVARRRRERISEKIRILKRM 129
Query: 142 VPGGTKMDTASMLDEAIRYVKFLKRQIRL 170
VPGG KMDTASMLDEAIRY KFLKRQ+RL
Sbjct: 130 VPGGAKMDTASMLDEAIRYTKFLKRQVRL 158
>gi|342298444|emb|CBY05412.1| INDEHISCENT-like protein [Aethionema carneum]
Length = 176
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 68/89 (76%), Positives = 78/89 (87%)
Query: 86 KEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGG 145
KEM Y IAAMQPVDIDP T+ KP RRN+RISDDPQ+V A RRE+ISEKIRIL+R+VPGG
Sbjct: 66 KEMQYMIAAMQPVDIDPATVPKPYRRNVRISDDPQTVVAXRRRERISEKIRILKRIVPGG 125
Query: 146 TKMDTASMLDEAIRYVKFLKRQIRLLQSN 174
KMD+ASMLDEAIRY KFLKRQ+R+LQ +
Sbjct: 126 AKMDSASMLDEAIRYTKFLKRQVRMLQPH 154
>gi|288901043|gb|ADC68234.1| bHLH transcription factor [Brassica oleracea]
Length = 180
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/83 (79%), Positives = 75/83 (90%)
Query: 90 YRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMD 149
Y IAAMQPVDIDP T+ KP RRN+R+S+DPQ+V AR RRE+ISEKIRIL+R+VPGG KMD
Sbjct: 75 YAIAAMQPVDIDPATVPKPNRRNVRVSEDPQTVVARRRRERISEKIRILKRMVPGGAKMD 134
Query: 150 TASMLDEAIRYVKFLKRQIRLLQ 172
TASMLDEAIRY KFLKRQ+RLLQ
Sbjct: 135 TASMLDEAIRYTKFLKRQVRLLQ 157
>gi|242058469|ref|XP_002458380.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
gi|241930355|gb|EES03500.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
Length = 406
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/141 (48%), Positives = 97/141 (68%), Gaps = 21/141 (14%)
Query: 71 DQEEDEEPE-EELGAMKEMMYRIAAMQPVDIDPTTI-----RKPKRRNIRISDDPQSVAA 124
D EP+ E + +KEM+YR AAM+PV++ P I KP+R+N+RIS DPQ+VAA
Sbjct: 242 DPSAGYEPDMEAMAQVKEMIYRAAAMRPVNLGPEVIAAAAAEKPRRKNVRISSDPQTVAA 301
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNIVGDDHY 184
R RRE++SE++R+LQ+LVPGG+KMDTASMLDEA Y+KFLK Q++ L+
Sbjct: 302 RLRRERVSERLRVLQKLVPGGSKMDTASMLDEAASYLKFLKSQVQALE------------ 349
Query: 185 NKLSLGATTNTTIATTTASAS 205
+LG T +T+ + +TA+AS
Sbjct: 350 ---TLGTTNDTSTSNSTATAS 367
>gi|356496900|ref|XP_003517303.1| PREDICTED: transcription factor HEC1-like [Glycine max]
Length = 251
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 118/172 (68%), Gaps = 20/172 (11%)
Query: 24 LWPSFNNFPLQTNTQILPS----SSRHIIQPSSSTLLFGDHNNNNNNNNIIDQ------- 72
L+P N + L + T LP ++ ++I P +TL+ N ++N + Q
Sbjct: 48 LYPE-NEYFLNSTTTTLPVFPNVNNPNVITPPPTTLI----NPPPPSSNFVLQQPMTPHL 102
Query: 73 EEDEEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKIS 132
E + E + + AM+EM++R+A MQPV IDP +I+ PKRRN++IS DPQSVAARHRRE+IS
Sbjct: 103 EPNPEKKNSVAAMREMIFRVAVMQPVHIDPESIKPPKRRNVKISKDPQSVAARHRRERIS 162
Query: 133 EKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ----SNQCNIVG 180
E+IRILQRLVPGGTKMDTASMLDEAI YVKFLK+Q++ L+ + N+VG
Sbjct: 163 ERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQAGATRPLNVVG 214
>gi|356528881|ref|XP_003533026.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 443
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 59/94 (62%), Positives = 77/94 (81%)
Query: 80 EELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQ 139
E + MKEM+YR AA +PV+ KPKR+N++IS DPQ+VAARHRRE+I+EKIR+LQ
Sbjct: 305 EAIAQMKEMIYRAAAFRPVNFGLEVAEKPKRKNVKISTDPQTVAARHRRERINEKIRVLQ 364
Query: 140 RLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
+LVPGG+KMDTASMLDEA Y+KFL+ Q++ L+S
Sbjct: 365 KLVPGGSKMDTASMLDEAANYLKFLRSQVKALES 398
>gi|356522216|ref|XP_003529743.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 431
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 59/94 (62%), Positives = 77/94 (81%)
Query: 80 EELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQ 139
E + MKEM+YR AA +PV+ + K KR+N++IS DPQ+VAARHRRE+ISEKIR+LQ
Sbjct: 303 EAIAQMKEMIYRAAAFRPVNFGLEVVEKLKRKNVKISTDPQTVAARHRRERISEKIRVLQ 362
Query: 140 RLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
+LVPGG+KMDTASMLDEA Y+KFL+ Q++ L+S
Sbjct: 363 KLVPGGSKMDTASMLDEAANYLKFLRSQVKALES 396
>gi|356541813|ref|XP_003539367.1| PREDICTED: transcription factor HEC1-like [Glycine max]
Length = 242
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/112 (65%), Positives = 91/112 (81%), Gaps = 4/112 (3%)
Query: 73 EEDEEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKIS 132
E + E + AM+EM++R+A MQP+ IDP +I+ PKRRN++IS DPQSVAARHRRE+IS
Sbjct: 94 EPNLEKRNSVAAMREMIFRVAVMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRRERIS 153
Query: 133 EKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ----SNQCNIVG 180
E+IRILQRLVPGGTKMDTASMLDEAI YVKFLK+Q++ L+ S N+VG
Sbjct: 154 ERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQAGASRPLNVVG 205
>gi|357482887|ref|XP_003611730.1| Transcription factor HEC2 [Medicago truncatula]
gi|355513065|gb|AES94688.1| Transcription factor HEC2 [Medicago truncatula]
Length = 247
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/176 (48%), Positives = 118/176 (67%), Gaps = 16/176 (9%)
Query: 9 FHHDPSAFSSSSSPSLWPSFNNFPLQTNTQILPSSSRHIIQPSSSTLLFGDHNNNNNNNN 68
F + S +SS +PSL ++PLQ + ++QP+ NNN++ +
Sbjct: 49 FPYGNSNVTSSLTPSLINPPLSYPLQQ------PMTPPLLQPNRVQTQIPSGRNNNSSLS 102
Query: 69 IIDQEEDEEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRR 128
E + + AM+EM++R+A MQP++IDP TI+ PKR+N++IS DPQSVAARHRR
Sbjct: 103 Y------PEKKNSMSAMREMIFRMAVMQPINIDPETIKPPKRKNVKISKDPQSVAARHRR 156
Query: 129 EKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ----SNQCNIVG 180
E+ISE+IRILQRLVPGGTKMDTASMLDEAI YVKFLK+Q++ L+ + N+VG
Sbjct: 157 ERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQVGANRPLNVVG 212
>gi|242057745|ref|XP_002458018.1| hypothetical protein SORBIDRAFT_03g025570 [Sorghum bicolor]
gi|241929993|gb|EES03138.1| hypothetical protein SORBIDRAFT_03g025570 [Sorghum bicolor]
Length = 477
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/118 (54%), Positives = 83/118 (70%), Gaps = 1/118 (0%)
Query: 57 FGDHNNNNNNNNIIDQEEDEEPEEELGAMKEMMYRIAAMQPVDIDPTTI-RKPKRRNIRI 115
F NN N ++ E E L +KEM+YR AAM+PV + +P+RRN+RI
Sbjct: 294 FDGRNNPAGNGGGVEDSMYEPDTEALAQVKEMIYRAAAMRPVSLGSEDAGERPRRRNVRI 353
Query: 116 SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
S DPQ+VAAR RRE+ISE++R+LQ+LVPGG KMDTASMLDEA Y++FLK Q+R LQ+
Sbjct: 354 SSDPQTVAARQRRERISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQVRELQT 411
>gi|356511883|ref|XP_003524651.1| PREDICTED: transcription factor HEC1-like [Glycine max]
Length = 273
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/101 (70%), Positives = 86/101 (85%)
Query: 77 EPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIR 136
E + + AM+EM++RIA MQPV IDP +I+ PKRRN++IS DPQSVAARHRRE+ISE+IR
Sbjct: 113 EKKNSMAAMREMIFRIAVMQPVHIDPESIKPPKRRNVKISKDPQSVAARHRRERISERIR 172
Query: 137 ILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
ILQRLVPGGTKMDTASMLDEAI YVKFLK+Q++ L+ N
Sbjct: 173 ILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQAGAN 213
>gi|356509739|ref|XP_003523603.1| PREDICTED: transcription factor HEC1-like [Glycine max]
gi|83853819|gb|ABC47852.1| bHelix-loop-helix transcription factor [Glycine max]
Length = 264
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 107/161 (66%), Gaps = 28/161 (17%)
Query: 52 SSTLLFGDHNNNNNNNNIIDQEEDE-----------------EPEEELGAMKEMMYRIAA 94
SST+ F +NNN I+ QE+ + E + AM+EM++R+AA
Sbjct: 76 SSTISF------SNNNPIMLQEQQQHSPSETYEDANANPYGGEKRSSMAAMREMIFRMAA 129
Query: 95 MQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASML 154
MQP+ IDP ++++PKRRN++IS DPQSVAARHRRE+ISE+IRILQRLVPGGTKMDTASML
Sbjct: 130 MQPIHIDPESVKQPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASML 189
Query: 155 DEAIRYVKFLKRQIRLLQ-----SNQCNIVGDDHYNKLSLG 190
DEAI YVKFLK Q++ LQ +N +G N +G
Sbjct: 190 DEAIHYVKFLKTQVQSLQRASSANNNIRPLGTSTVNATGIG 230
>gi|413950402|gb|AFW83051.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 430
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 72/149 (48%), Positives = 94/149 (63%), Gaps = 9/149 (6%)
Query: 59 DHNNNNNNNNIIDQEEDEEPEEELGAMKEMMYRIAAMQPVDI--DPTTIRKPKRRNIRIS 116
D N N +D E E L +KEM+YR AAM+PV + + +P+RRN+RIS
Sbjct: 262 DGRNPETNCGGVDDPMYEPDTEALAQVKEMIYRAAAMRPVSLGSEEDAGERPRRRNVRIS 321
Query: 117 DDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQC 176
DPQ+VAAR RRE+ISE++R+LQ+LVPGG KMDTASMLDEA Y++FL+ Q+R LQ+
Sbjct: 322 SDPQTVAARQRRERISERLRVLQKLVPGGAKMDTASMLDEAASYLRFLQSQVRELQTL-- 379
Query: 177 NIVGDDHYNKLSLGATTNTTIATTTASAS 205
D N A N + AT T +AS
Sbjct: 380 -----DRRNYGLTTADNNASRATATMAAS 403
>gi|224137546|ref|XP_002327153.1| predicted protein [Populus trichocarpa]
gi|222835468|gb|EEE73903.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 70/96 (72%), Positives = 85/96 (88%)
Query: 82 LGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRL 141
+ AM+EM++RIAAMQP+ IDP +++ PKRRN++IS DPQSVAARHRRE+ISE+IRILQRL
Sbjct: 125 MAAMREMIFRIAAMQPIHIDPESVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRL 184
Query: 142 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
VPGGTKMDTASMLDEAI YVKFLK Q++ L+ Q N
Sbjct: 185 VPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAQAN 220
>gi|297830832|ref|XP_002883298.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297329138|gb|EFH59557.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 374
Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 78/97 (80%), Gaps = 1/97 (1%)
Query: 77 EPEEE-LGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKI 135
EP+ E + MKEM+YR AA +PV+ + KPKR+N++IS DPQ+VAAR RRE+ISEKI
Sbjct: 238 EPDAEAIAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKI 297
Query: 136 RILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
R+LQ LVPGGTKMDTASMLDEA Y+KFL+ Q++ L+
Sbjct: 298 RVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKALE 334
>gi|15232534|ref|NP_188770.1| transcription factor bHLH87 [Arabidopsis thaliana]
gi|75303373|sp|Q8S3D2.1|BH087_ARATH RecName: Full=Transcription factor bHLH87; AltName: Full=Basic
helix-loop-helix protein 87; Short=AtbHLH87; Short=bHLH
87; AltName: Full=Transcription factor EN 121; AltName:
Full=bHLH transcription factor bHLH087
gi|20127095|gb|AAM10960.1|AF488617_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|56382001|gb|AAV85719.1| At3g21330 [Arabidopsis thaliana]
gi|332642972|gb|AEE76493.1| transcription factor bHLH87 [Arabidopsis thaliana]
Length = 373
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 78/97 (80%), Gaps = 1/97 (1%)
Query: 77 EPEEE-LGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKI 135
EP+ E + MKEM+YR AA +PV+ + KPKR+N++IS DPQ+VAAR RRE+ISEKI
Sbjct: 236 EPDAEAIAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKI 295
Query: 136 RILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
R+LQ LVPGGTKMDTASMLDEA Y+KFL+ Q++ L+
Sbjct: 296 RVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKALE 332
>gi|449447251|ref|XP_004141382.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
gi|449524104|ref|XP_004169063.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 238
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/123 (59%), Positives = 95/123 (77%)
Query: 50 PSSSTLLFGDHNNNNNNNNIIDQEEDEEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPK 109
P ST+ F +++ N+ + E + + + AM+EM++RIA MQP+ IDP ++ PK
Sbjct: 76 PQQSTVPFPGTSSSRWRNSGSCETESLQKQRSVAAMREMIFRIAVMQPIHIDPEAVKPPK 135
Query: 110 RRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIR 169
RRN++IS DPQSVAARHRRE+ISE+IRILQRLVPGGTKMDTASMLDEAI YVKFLK Q++
Sbjct: 136 RRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 195
Query: 170 LLQ 172
L+
Sbjct: 196 SLE 198
>gi|9294680|dbj|BAB03046.1| unnamed protein product [Arabidopsis thaliana]
Length = 402
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 78/97 (80%), Gaps = 1/97 (1%)
Query: 77 EPEEE-LGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKI 135
EP+ E + MKEM+YR AA +PV+ + KPKR+N++IS DPQ+VAAR RRE+ISEKI
Sbjct: 265 EPDAEAIAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKI 324
Query: 136 RILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
R+LQ LVPGGTKMDTASMLDEA Y+KFL+ Q++ L+
Sbjct: 325 RVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKALE 361
>gi|255538274|ref|XP_002510202.1| transcription factor, putative [Ricinus communis]
gi|223550903|gb|EEF52389.1| transcription factor, putative [Ricinus communis]
Length = 274
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/96 (71%), Positives = 85/96 (88%)
Query: 82 LGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRL 141
+ AM+EM++RIAAMQP+ IDP +++ PKRRN++IS DPQSVAARHRRE+ISE+IRILQRL
Sbjct: 130 MAAMREMIFRIAAMQPIHIDPESVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRL 189
Query: 142 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
VPGGTKMDTASMLDEAI YVKFLK Q++ L+ Q +
Sbjct: 190 VPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAQAS 225
>gi|28393737|gb|AAO42279.1| unknown protein [Arabidopsis thaliana]
Length = 373
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 77/97 (79%), Gaps = 1/97 (1%)
Query: 77 EPEEE-LGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKI 135
EP+ E + MKEM+YR AA +PV+ + KPKR+N++IS DPQ+VAAR RRE+ISEKI
Sbjct: 236 EPDAEAIAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKI 295
Query: 136 RILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
R+LQ LVPGGTKMDTASMLDEA Y KFL+ Q++ L+
Sbjct: 296 RVLQTLVPGGTKMDTASMLDEAANYFKFLRAQVKALE 332
>gi|357130303|ref|XP_003566789.1| PREDICTED: uncharacterized protein LOC100831535 [Brachypodium
distachyon]
Length = 455
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/126 (54%), Positives = 86/126 (68%), Gaps = 8/126 (6%)
Query: 71 DQEEDEEPE-EELGAMKEMMYRIAAMQPV-------DIDPTTIRKPKRRNIRISDDPQSV 122
+Q++ EP+ E L +KEM+YR AAM+PV D D P RRN+RIS DPQ+V
Sbjct: 286 EQQQQYEPDTEALAQVKEMIYRAAAMRPVTLGCNGGDEDTERAPAPGRRNVRISSDPQTV 345
Query: 123 AARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNIVGDD 182
AAR RRE+ISE++R+LQRLVPGG KMDTASMLDEA Y++FLK QIR LQ+ D
Sbjct: 346 AARQRRERISERLRVLQRLVPGGAKMDTASMLDEAASYLRFLKAQIRDLQTLDRRNYPAD 405
Query: 183 HYNKLS 188
H N +
Sbjct: 406 HLNNCT 411
>gi|356565592|ref|XP_003551023.1| PREDICTED: transcription factor HEC1-like [Glycine max]
Length = 299
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/91 (75%), Positives = 83/91 (91%)
Query: 82 LGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRL 141
+ AM+EM++RIA MQPV IDP +I+ PKRRN++IS DPQSVAARHRRE+ISE+IRILQRL
Sbjct: 121 MAAMREMIFRIAVMQPVHIDPESIKPPKRRNVKISKDPQSVAARHRRERISERIRILQRL 180
Query: 142 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
VPGGTKMDTASMLDEAI YVKFLK+Q++ L+
Sbjct: 181 VPGGTKMDTASMLDEAIHYVKFLKKQVQTLE 211
>gi|224063507|ref|XP_002301178.1| predicted protein [Populus trichocarpa]
gi|222842904|gb|EEE80451.1| predicted protein [Populus trichocarpa]
Length = 261
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/96 (71%), Positives = 84/96 (87%)
Query: 82 LGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRL 141
+ M+EM++RIAAMQP+ IDP +++ PKRRN++IS DPQSVAARHRRE+ISE+IRILQRL
Sbjct: 123 MATMREMIFRIAAMQPIQIDPESVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRL 182
Query: 142 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
VPGGTKMDTASMLDEAI YVKFLK Q++ L+ Q N
Sbjct: 183 VPGGTKMDTASMLDEAIHYVKFLKTQVQSLERFQAN 218
>gi|242088653|ref|XP_002440159.1| hypothetical protein SORBIDRAFT_09g027030 [Sorghum bicolor]
gi|241945444|gb|EES18589.1| hypothetical protein SORBIDRAFT_09g027030 [Sorghum bicolor]
Length = 401
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/125 (50%), Positives = 90/125 (72%), Gaps = 10/125 (8%)
Query: 58 GDHNNNNNNNNIIDQEEDEEPEEE-LGAMKEMMYRIAAMQPV---------DIDPTTIRK 107
GDH+ +++ + EP+ E L +KEM+YR AAM+PV + P++ K
Sbjct: 223 GDHHAAGGSSSSAGGGYEYEPDSEALAQVKEMIYRAAAMRPVHQLVCGAGTEPAPSSQSK 282
Query: 108 PKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQ 167
P+R+N+RIS DPQ+VAAR RRE++SE++R+LQRLVPGG++MDTASMLDEA Y+KFLK Q
Sbjct: 283 PRRKNVRISSDPQTVAARLRRERVSERLRVLQRLVPGGSRMDTASMLDEAASYLKFLKTQ 342
Query: 168 IRLLQ 172
++ L+
Sbjct: 343 VKALE 347
>gi|356518097|ref|XP_003527719.1| PREDICTED: uncharacterized protein LOC100788158 [Glycine max]
gi|83853832|gb|ABC47864.1| bhelix-loop-helix transcription factor [Glycine max]
Length = 258
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/156 (53%), Positives = 107/156 (68%), Gaps = 15/156 (9%)
Query: 29 NNFPLQTNTQILPSSSRHIIQPSSSTLLFGDHNNNNNNNNIIDQEEDEEPE--------- 79
NN PL + I SSS +ST NN++ I+ QE +++ E
Sbjct: 58 NNNPL---SPIPWSSSYSFTHLPASTTEISFSNNSHPTTPIMLQEHEQQYEGANANPYGG 114
Query: 80 ---EELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIR 136
+ AM+EM++R+AAMQP+ IDP +++ PKRRN++IS DPQSVAARHRRE+ISE+IR
Sbjct: 115 EKRNSMAAMREMIFRMAAMQPIHIDPESVKAPKRRNVKISKDPQSVAARHRRERISERIR 174
Query: 137 ILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
ILQRLVPGGTKMDTASMLDEAI YVKFLK Q++ L+
Sbjct: 175 ILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 210
>gi|255565212|ref|XP_002523598.1| DNA binding protein, putative [Ricinus communis]
gi|223537160|gb|EEF38793.1| DNA binding protein, putative [Ricinus communis]
Length = 278
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/101 (69%), Positives = 86/101 (85%)
Query: 77 EPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIR 136
E + A++EM++RIAAMQP+ IDP +I+ PKRRN++IS DPQSVAARHRRE+ISE+IR
Sbjct: 137 EKKNSTAAIREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRRERISERIR 196
Query: 137 ILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
ILQRLVPGGTKMDTASMLDEAI YVKFLK+Q++ L+ N
Sbjct: 197 ILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEQAGAN 237
>gi|414880798|tpg|DAA57929.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414880799|tpg|DAA57930.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 422
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 82/105 (78%), Gaps = 8/105 (7%)
Query: 77 EPE-EELGAMKEMMYRIAAMQPVDIDP-------TTIRKPKRRNIRISDDPQSVAARHRR 128
EP+ E + +KEM+YR AAM+PV++ P +P+R+N+RIS DPQ+VAAR RR
Sbjct: 245 EPDMEAMAQVKEMIYRAAAMRPVNLGPEAVGAAGAGAERPRRKNVRISSDPQTVAARLRR 304
Query: 129 EKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
E++SE++R+LQ+LVPGG+KMDTASMLDEA Y+KFLK Q++ L++
Sbjct: 305 ERVSERLRVLQKLVPGGSKMDTASMLDEAASYLKFLKSQVQALET 349
>gi|15240189|ref|NP_201507.1| transcription factor HEC1 [Arabidopsis thaliana]
gi|75309085|sp|Q9FHA7.1|HEC1_ARATH RecName: Full=Transcription factor HEC1; AltName: Full=Basic
helix-loop-helix protein 88; Short=AtbHLH88; Short=bHLH
88; AltName: Full=Protein HECATE 1; AltName:
Full=Transcription factor EN 118; AltName: Full=bHLH
transcription factor bHLH088
gi|20127097|gb|AAM10961.1|AF488618_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|10177593|dbj|BAB10940.1| unnamed protein product [Arabidopsis thaliana]
gi|110737755|dbj|BAF00816.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332010913|gb|AED98296.1| transcription factor HEC1 [Arabidopsis thaliana]
Length = 241
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 68/91 (74%), Positives = 82/91 (90%)
Query: 82 LGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRL 141
+ AM+EM++RIA MQP+ IDP ++ PKRRN+RIS DPQSVAARHRRE+ISE+IRILQRL
Sbjct: 95 MAAMREMIFRIAVMQPIHIDPEAVKPPKRRNVRISKDPQSVAARHRRERISERIRILQRL 154
Query: 142 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
VPGGTKMDTASMLDEAI YVKFLK+Q++ L+
Sbjct: 155 VPGGTKMDTASMLDEAIHYVKFLKKQVQSLE 185
>gi|297797671|ref|XP_002866720.1| hypothetical protein ARALYDRAFT_496895 [Arabidopsis lyrata subsp.
lyrata]
gi|297312555|gb|EFH42979.1| hypothetical protein ARALYDRAFT_496895 [Arabidopsis lyrata subsp.
lyrata]
Length = 237
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 68/91 (74%), Positives = 82/91 (90%)
Query: 82 LGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRL 141
+ AM+EM++RIA MQP+ IDP ++ PKRRN+RIS DPQSVAARHRRE+ISE+IRILQRL
Sbjct: 95 MAAMREMIFRIAVMQPIHIDPEAVKPPKRRNVRISKDPQSVAARHRRERISERIRILQRL 154
Query: 142 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
VPGGTKMDTASMLDEAI YVKFLK+Q++ L+
Sbjct: 155 VPGGTKMDTASMLDEAIHYVKFLKKQVQSLE 185
>gi|297597040|ref|NP_001043364.2| Os01g0566800 [Oryza sativa Japonica Group]
gi|255673375|dbj|BAF05278.2| Os01g0566800, partial [Oryza sativa Japonica Group]
Length = 496
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/99 (62%), Positives = 79/99 (79%), Gaps = 2/99 (2%)
Query: 77 EPE-EELGAMKEMMYRIAAMQPVDIDPTTI-RKPKRRNIRISDDPQSVAARHRREKISEK 134
EP+ E L +KEM+YR AAM+PV + +P+RRN+RIS DPQ+VAAR RRE+ISE+
Sbjct: 342 EPDTEALAQVKEMIYRAAAMRPVTLGAEDAGERPRRRNVRISSDPQTVAARQRRERISER 401
Query: 135 IRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
+R+LQ+LVPGG KMDTASMLDEA Y++FLK QIR LQ+
Sbjct: 402 LRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQIRELQT 440
>gi|125526474|gb|EAY74588.1| hypothetical protein OsI_02477 [Oryza sativa Indica Group]
Length = 481
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/99 (62%), Positives = 79/99 (79%), Gaps = 2/99 (2%)
Query: 77 EPE-EELGAMKEMMYRIAAMQPVDIDPTTI-RKPKRRNIRISDDPQSVAARHRREKISEK 134
EP+ E L +KEM+YR AAM+PV + +P+RRN+RIS DPQ+VAAR RRE+ISE+
Sbjct: 326 EPDTEALAQVKEMIYRAAAMRPVTLGAEDAGERPRRRNVRISSDPQTVAARQRRERISER 385
Query: 135 IRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
+R+LQ+LVPGG KMDTASMLDEA Y++FLK QIR LQ+
Sbjct: 386 LRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQIRELQT 424
>gi|52076245|dbj|BAD45013.1| bHLH transcription-like [Oryza sativa Japonica Group]
gi|52076301|dbj|BAD45086.1| bHLH transcription-like [Oryza sativa Japonica Group]
Length = 484
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/99 (62%), Positives = 79/99 (79%), Gaps = 2/99 (2%)
Query: 77 EPE-EELGAMKEMMYRIAAMQPVDIDPTTI-RKPKRRNIRISDDPQSVAARHRREKISEK 134
EP+ E L +KEM+YR AAM+PV + +P+RRN+RIS DPQ+VAAR RRE+ISE+
Sbjct: 330 EPDTEALAQVKEMIYRAAAMRPVTLGAEDAGERPRRRNVRISSDPQTVAARQRRERISER 389
Query: 135 IRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
+R+LQ+LVPGG KMDTASMLDEA Y++FLK QIR LQ+
Sbjct: 390 LRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQIRELQT 428
>gi|414881477|tpg|DAA58608.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 481
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 104/187 (55%), Gaps = 26/187 (13%)
Query: 57 FGDHNNNNNNNNIIDQEEDEEPE-EELGAMKEMMYRIAAMQPV------DIDPTTIRKPK 109
F N N + EP+ E L +KEM+YR AAM+PV D R P+
Sbjct: 307 FDGRNPARNGGGGGGGDPVYEPDTEALAQVKEMIYRAAAMRPVSLGSEDDAGAGAERPPR 366
Query: 110 RRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIR 169
RRN+RIS DPQ+VAAR RRE+IS+++R+LQ+LVPGG KMDTASMLDEA Y++FLK Q+R
Sbjct: 367 RRNVRISSDPQTVAARQRRERISDRLRVLQKLVPGGAKMDTASMLDEAASYLRFLKSQVR 426
Query: 170 LLQSNQCNIVGDDHYNKLSLGATTNTTIATTTASASAAGALDPILGHSLPFHGNRNSSFY 229
LQ+ ++ + GA ++ A T A+ ++G SL ++ +
Sbjct: 427 DLQT----------LDRRNYGAASSNDAAATMAA---------VVGSSLSYNRGTGAMPA 467
Query: 230 FNHHEVG 236
F G
Sbjct: 468 FTFPAAG 474
>gi|302759943|ref|XP_002963394.1| hypothetical protein SELMODRAFT_405220 [Selaginella moellendorffii]
gi|300168662|gb|EFJ35265.1| hypothetical protein SELMODRAFT_405220 [Selaginella moellendorffii]
Length = 459
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 73/89 (82%), Gaps = 1/89 (1%)
Query: 85 MKEMMYRIAAMQPVD-IDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVP 143
M+E +YR+A +P+ D KPKRRN+RIS DPQ+VAARHRRE+IS KIRILQRLVP
Sbjct: 258 MRETLYRMAVWRPITATDCLGGSKPKRRNVRISSDPQTVAARHRRERISTKIRILQRLVP 317
Query: 144 GGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
GGTKMDTASMLDEAI YVK+LK Q++ ++
Sbjct: 318 GGTKMDTASMLDEAIHYVKYLKSQVQAME 346
>gi|357141633|ref|XP_003572294.1| PREDICTED: uncharacterized protein LOC100835736 [Brachypodium
distachyon]
Length = 252
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/89 (78%), Positives = 82/89 (92%)
Query: 84 AMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVP 143
AM+EM++RIAA+QPV+IDP T+R PKRRN+RIS DPQSVAAR RRE+ISE+IRILQRLVP
Sbjct: 134 AMREMIFRIAALQPVNIDPETVRPPKRRNVRISTDPQSVAARVRRERISERIRILQRLVP 193
Query: 144 GGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
GGTKMDTASMLDEAI YVKFLK Q++ L+
Sbjct: 194 GGTKMDTASMLDEAIHYVKFLKTQVQSLE 222
>gi|297819712|ref|XP_002877739.1| hypothetical protein ARALYDRAFT_485384 [Arabidopsis lyrata subsp.
lyrata]
gi|297323577|gb|EFH53998.1| hypothetical protein ARALYDRAFT_485384 [Arabidopsis lyrata subsp.
lyrata]
Length = 223
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/93 (72%), Positives = 84/93 (90%)
Query: 82 LGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRL 141
+ AM+EM++RIA MQP+ IDP +++ PKR+N+RIS DPQSVAARHRRE+ISE+IRILQRL
Sbjct: 85 MAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIRILQRL 144
Query: 142 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSN 174
VPGGTKMDTASMLDEAI YVKFLK+Q++ L+ +
Sbjct: 145 VPGGTKMDTASMLDEAIHYVKFLKKQVQSLEEH 177
>gi|302785816|ref|XP_002974679.1| hypothetical protein SELMODRAFT_415047 [Selaginella moellendorffii]
gi|300157574|gb|EFJ24199.1| hypothetical protein SELMODRAFT_415047 [Selaginella moellendorffii]
Length = 520
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 73/89 (82%), Gaps = 1/89 (1%)
Query: 85 MKEMMYRIAAMQPVD-IDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVP 143
M+E +YR+A +P+ D KPKRRN+RIS DPQ+VAARHRRE+IS KIRILQRLVP
Sbjct: 259 MRETLYRMAVWRPITATDCLGGSKPKRRNVRISSDPQTVAARHRRERISTKIRILQRLVP 318
Query: 144 GGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
GGTKMDTASMLDEAI YVK+LK Q++ ++
Sbjct: 319 GGTKMDTASMLDEAIHYVKYLKSQVQAME 347
>gi|224059166|ref|XP_002299748.1| predicted protein [Populus trichocarpa]
gi|222847006|gb|EEE84553.1| predicted protein [Populus trichocarpa]
Length = 304
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/93 (60%), Positives = 75/93 (80%)
Query: 80 EELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQ 139
E + MKEM+YR AA +PV++ KPKR+N+RIS DPQ+VAAR RRE+IS++IR+LQ
Sbjct: 169 EAIAQMKEMIYRAAAFRPVNLGLEVAEKPKRKNVRISTDPQTVAARQRRERISDRIRVLQ 228
Query: 140 RLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
+VPGG+KMDTASMLDEA Y+KFL+ Q++ L+
Sbjct: 229 GMVPGGSKMDTASMLDEAANYLKFLRSQVKALE 261
>gi|15229725|ref|NP_190602.1| transcription factor HEC2 [Arabidopsis thaliana]
gi|75313649|sp|Q9SND4.1|HEC2_ARATH RecName: Full=Transcription factor HEC2; AltName: Full=Basic
helix-loop-helix protein 37; Short=AtbHLH37; Short=bHLH
37; AltName: Full=Protein HECATE 2; AltName:
Full=Transcription factor EN 117; AltName: Full=bHLH
transcription factor bHLH037
gi|6523044|emb|CAB62312.1| putative protein [Arabidopsis thaliana]
gi|37202028|gb|AAQ89629.1| At3g50330 [Arabidopsis thaliana]
gi|51969500|dbj|BAD43442.1| putative bHLH transcription factor (bHLH037) [Arabidopsis thaliana]
gi|51969966|dbj|BAD43675.1| putative bHLH transcription factor (bHLH037) [Arabidopsis thaliana]
gi|332645132|gb|AEE78653.1| transcription factor HEC2 [Arabidopsis thaliana]
Length = 231
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/91 (73%), Positives = 83/91 (91%)
Query: 82 LGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRL 141
+ AM+EM++RIA MQP+ IDP +++ PKR+N+RIS DPQSVAARHRRE+ISE+IRILQRL
Sbjct: 92 MAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIRILQRL 151
Query: 142 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
VPGGTKMDTASMLDEAI YVKFLK+Q++ L+
Sbjct: 152 VPGGTKMDTASMLDEAIHYVKFLKKQVQSLE 182
>gi|51970182|dbj|BAD43783.1| putative bHLH transcription factor (bHLH037) [Arabidopsis thaliana]
Length = 231
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/91 (73%), Positives = 83/91 (91%)
Query: 82 LGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRL 141
+ AM+EM++RIA MQP+ IDP +++ PKR+N+RIS DPQSVAARHRRE+ISE+IRILQRL
Sbjct: 92 MAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIRILQRL 151
Query: 142 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
VPGGTKMDTASMLDEAI YVKFLK+Q++ L+
Sbjct: 152 VPGGTKMDTASMLDEAIHYVKFLKKQVQSLE 182
>gi|357130817|ref|XP_003567042.1| PREDICTED: uncharacterized protein LOC100822019 [Brachypodium
distachyon]
Length = 397
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 93/140 (66%), Gaps = 13/140 (9%)
Query: 41 PSSSRHIIQPSSSTLLFGDHNNNNNNNNIIDQEEDEEPE-EELGAMKEMMYRIAAMQPVD 99
P ++ +++++ FG H+ N EP+ E + +KEM+YR AAM+PV
Sbjct: 211 PGGAKRRALTTTTSISFGHHDMTNAAGGY-------EPDVEAMAQVKEMIYRAAAMRPVS 263
Query: 100 I-----DPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASML 154
+ KP+R+N+RIS DPQ+VAAR RRE++S+++R+LQ+LVPGG+KMDTASML
Sbjct: 264 LVTAEAGAAASAKPRRKNVRISSDPQTVAARLRRERVSDRLRVLQKLVPGGSKMDTASML 323
Query: 155 DEAIRYVKFLKRQIRLLQSN 174
DEA Y+KFL+ Q++ L++
Sbjct: 324 DEAASYLKFLRSQVQALETG 343
>gi|125570859|gb|EAZ12374.1| hypothetical protein OsJ_02263 [Oryza sativa Japonica Group]
Length = 484
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/99 (61%), Positives = 79/99 (79%), Gaps = 2/99 (2%)
Query: 77 EPE-EELGAMKEMMYRIAAMQPVDIDPTTI-RKPKRRNIRISDDPQSVAARHRREKISEK 134
EP+ E + +KEM+YR AAM+PV + +P+RRN+RIS DPQ+VAAR RRE+ISE+
Sbjct: 330 EPDTEAIAQVKEMIYRAAAMRPVTLGAEDAGERPRRRNVRISSDPQTVAARQRRERISER 389
Query: 135 IRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
+R+LQ+LVPGG KMDTASMLDEA Y++FLK QIR LQ+
Sbjct: 390 LRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQIRELQT 428
>gi|42408644|dbj|BAD09865.1| bHLH protein family-like [Oryza sativa Japonica Group]
gi|125561863|gb|EAZ07311.1| hypothetical protein OsI_29558 [Oryza sativa Indica Group]
gi|125603724|gb|EAZ43049.1| hypothetical protein OsJ_27638 [Oryza sativa Japonica Group]
Length = 246
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/89 (77%), Positives = 81/89 (91%)
Query: 84 AMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVP 143
AM+EM++ IAA+QPV+IDP T+R PKRRN+RIS DPQSVAAR RRE+ISE+IRILQRLVP
Sbjct: 126 AMREMIFHIAALQPVNIDPETVRPPKRRNVRISTDPQSVAARMRRERISERIRILQRLVP 185
Query: 144 GGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
GGTKMDTASMLDEAI YVKFLK Q++ L+
Sbjct: 186 GGTKMDTASMLDEAIHYVKFLKTQVQSLE 214
>gi|223702408|gb|ACN21635.1| putative basic helix-loop-helix protein BHLH11 [Lotus japonicus]
Length = 495
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 80/101 (79%), Gaps = 3/101 (2%)
Query: 76 EEPE-EELGAMKEMMYRIAAMQPVDID--PTTIRKPKRRNIRISDDPQSVAARHRREKIS 132
EEP+ E + MKEM+YR AA +PV + KPKR+N++IS DPQ+VAAR RRE+IS
Sbjct: 349 EEPDPEAIAQMKEMIYRAAAFRPVSLLGLEEVAEKPKRKNVKISSDPQTVAARQRRERIS 408
Query: 133 EKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
++IR+LQ++VPGG+KMDTASMLDEA Y+KFL+ Q++ L+S
Sbjct: 409 DRIRVLQKIVPGGSKMDTASMLDEAANYLKFLRSQVKALES 449
>gi|413921862|gb|AFW61794.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 241
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/89 (76%), Positives = 81/89 (91%)
Query: 84 AMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVP 143
AM+EM++R+AA+QPV+IDP +R PKRRN+RIS DPQSVAAR RRE+ISE+IRILQRLVP
Sbjct: 128 AMREMIFRVAALQPVNIDPEMVRPPKRRNVRISTDPQSVAARMRRERISERIRILQRLVP 187
Query: 144 GGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
GGTKMDTASMLDEAI YVKFLK Q++ L+
Sbjct: 188 GGTKMDTASMLDEAIHYVKFLKTQVQSLE 216
>gi|326507862|dbj|BAJ86674.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 405
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 91/128 (71%), Gaps = 10/128 (7%)
Query: 51 SSSTLLFGDHNNNNNNNNIIDQEEDEEPE-EELGAMKEMMYRIAAMQPVDI----DPTTI 105
+++++ FG + N+ EP+ E + +KEM+YR AAM+PV + I
Sbjct: 217 TATSITFGLQDTNSAG-----AAGGYEPDMEAMAQVKEMIYRAAAMRPVSLVTESPAAGI 271
Query: 106 RKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
KP+R+N+RIS DPQ+VAAR RRE++S+++R+LQ+LVPGG+KMDTASMLDEA Y+KFLK
Sbjct: 272 SKPRRKNVRISSDPQTVAARLRRERVSDRLRVLQKLVPGGSKMDTASMLDEAASYLKFLK 331
Query: 166 RQIRLLQS 173
Q++ L++
Sbjct: 332 SQVQALET 339
>gi|242081721|ref|XP_002445629.1| hypothetical protein SORBIDRAFT_07g022920 [Sorghum bicolor]
gi|241941979|gb|EES15124.1| hypothetical protein SORBIDRAFT_07g022920 [Sorghum bicolor]
Length = 269
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/89 (76%), Positives = 81/89 (91%)
Query: 84 AMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVP 143
AM+EM++R+AA+QPV+IDP +R PKRRN+RIS DPQSVAAR RRE+ISE+IRILQRLVP
Sbjct: 147 AMREMIFRVAALQPVNIDPEMVRPPKRRNVRISTDPQSVAARMRRERISERIRILQRLVP 206
Query: 144 GGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
GGTKMDTASMLDEAI YVKFLK Q++ L+
Sbjct: 207 GGTKMDTASMLDEAIHYVKFLKTQVQSLE 235
>gi|223975981|gb|ACN32178.1| unknown [Zea mays]
gi|413946283|gb|AFW78932.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413946284|gb|AFW78933.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 396
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 70/150 (46%), Positives = 96/150 (64%), Gaps = 13/150 (8%)
Query: 77 EPEEE-LGAMKEMMYRIAAMQPV--------DIDP--TTIRKPKRRNIRISDDPQSVAAR 125
EP+ E + +KEM+YR AAM+PV +P ++ KP+RRN+RIS DPQ+VAAR
Sbjct: 236 EPDSEAIAQVKEMIYRAAAMRPVHQLVCGAAGGEPPSSSQNKPRRRNVRISSDPQTVAAR 295
Query: 126 HRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNIVGDDHYN 185
RRE++SE++R+LQRLVPGG++MDTASMLDEA Y+KFLK Q++ L+ + N + YN
Sbjct: 296 LRRERVSERLRVLQRLVPGGSRMDTASMLDEAAGYLKFLKSQVKALE--RANPSSNGGYN 353
Query: 186 KLSLGATTNTTIATTTASASAAGALDPILG 215
S + T SAA D +G
Sbjct: 354 DSSFLPQSYTGCLGVDGGTSAAFGSDGAIG 383
>gi|225438732|ref|XP_002277850.1| PREDICTED: transcription factor HEC1 [Vitis vinifera]
gi|296082413|emb|CBI21418.3| unnamed protein product [Vitis vinifera]
Length = 252
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 67/96 (69%), Positives = 83/96 (86%)
Query: 77 EPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIR 136
E + + AM+EM++ IA MQP+ IDP +++ PKRRN++IS DPQSVAARHRRE+ISE+IR
Sbjct: 112 EKKNSMAAMREMIFSIAVMQPIHIDPESVKPPKRRNVKISKDPQSVAARHRRERISERIR 171
Query: 137 ILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
ILQRLVPGGTKMDTASMLDEAI YVKFLK Q++ L+
Sbjct: 172 ILQRLVPGGTKMDTASMLDEAIHYVKFLKNQVQSLE 207
>gi|125527433|gb|EAY75547.1| hypothetical protein OsI_03453 [Oryza sativa Indica Group]
Length = 394
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 57/99 (57%), Positives = 79/99 (79%), Gaps = 2/99 (2%)
Query: 77 EPE-EELGAMKEMMYRIAAMQPVDIDP-TTIRKPKRRNIRISDDPQSVAARHRREKISEK 134
EP+ E + +KEM+YR AAM+PV + KP+R+N+RIS DPQ+VAAR RRE++S++
Sbjct: 242 EPDMEAMAQVKEMIYRAAAMRPVHLGTEAAADKPRRKNVRISSDPQTVAARLRRERVSDR 301
Query: 135 IRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
+R+LQ+LVPGG KMDTASMLDEA Y+KFLK Q++ L++
Sbjct: 302 LRVLQKLVPGGNKMDTASMLDEAASYLKFLKSQVQKLET 340
>gi|326530726|dbj|BAK01161.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 238
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 67/89 (75%), Positives = 79/89 (88%)
Query: 84 AMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVP 143
AM+EM++ IAA+QPVDIDP +R PKRRN+R S DPQSVAAR RRE+ISE+IR+LQRLVP
Sbjct: 124 AMREMIFHIAALQPVDIDPEAVRPPKRRNVRTSKDPQSVAARLRRERISERIRVLQRLVP 183
Query: 144 GGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
GGTKMDTASMLDEAI YVKFLK Q++ L+
Sbjct: 184 GGTKMDTASMLDEAIHYVKFLKSQVQSLE 212
>gi|115439485|ref|NP_001044022.1| Os01g0707500 [Oryza sativa Japonica Group]
gi|19571105|dbj|BAB86530.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|20804650|dbj|BAB92339.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113533553|dbj|BAF05936.1| Os01g0707500 [Oryza sativa Japonica Group]
gi|125571756|gb|EAZ13271.1| hypothetical protein OsJ_03197 [Oryza sativa Japonica Group]
gi|215741088|dbj|BAG97583.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 393
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 57/99 (57%), Positives = 79/99 (79%), Gaps = 2/99 (2%)
Query: 77 EPE-EELGAMKEMMYRIAAMQPVDIDP-TTIRKPKRRNIRISDDPQSVAARHRREKISEK 134
EP+ E + +KEM+YR AAM+PV + KP+R+N+RIS DPQ+VAAR RRE++S++
Sbjct: 241 EPDMEAMAQVKEMIYRAAAMRPVHLGTEAAADKPRRKNVRISSDPQTVAARLRRERVSDR 300
Query: 135 IRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
+R+LQ+LVPGG KMDTASMLDEA Y+KFLK Q++ L++
Sbjct: 301 LRVLQKLVPGGNKMDTASMLDEAASYLKFLKSQVQKLET 339
>gi|293331875|ref|NP_001169147.1| uncharacterized protein LOC100382992 [Zea mays]
gi|223975155|gb|ACN31765.1| unknown [Zea mays]
Length = 395
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/150 (46%), Positives = 95/150 (63%), Gaps = 13/150 (8%)
Query: 77 EPEEE-LGAMKEMMYRIAAMQPV--------DIDP--TTIRKPKRRNIRISDDPQSVAAR 125
EP+ E + +KEM+YR AAM+PV +P ++ KP+RRN+RIS DPQ+VAAR
Sbjct: 237 EPDSEAIAQVKEMIYRAAAMRPVHQLVCGAAGGEPPSSSQNKPRRRNVRISSDPQTVAAR 296
Query: 126 HRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNIVGDDHYN 185
RRE++SE++R+LQRLVPGG++MDTASMLDEA Y+KFLK Q++ L+ + N + YN
Sbjct: 297 LRRERVSERLRVLQRLVPGGSRMDTASMLDEAAGYLKFLKSQVKALE--RANPSSNGGYN 354
Query: 186 KLSLGATTNTTIATTTASASAAGALDPILG 215
S + T S A D +G
Sbjct: 355 GSSFLPQSYTGCLCVDGGTSVAFGSDGAIG 384
>gi|115479527|ref|NP_001063357.1| Os09g0455300 [Oryza sativa Japonica Group]
gi|51535231|dbj|BAD38280.1| basic helix-loop-helix (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|51536285|dbj|BAD38453.1| basic helix-loop-helix (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|113631590|dbj|BAF25271.1| Os09g0455300 [Oryza sativa Japonica Group]
gi|125563981|gb|EAZ09361.1| hypothetical protein OsI_31634 [Oryza sativa Indica Group]
gi|215697773|dbj|BAG91966.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765762|dbj|BAG87459.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 236
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/89 (76%), Positives = 80/89 (89%)
Query: 84 AMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVP 143
AM+EM++ IAA+QPV+IDP +R PKRRN+RIS DPQSVAAR RRE+ISE+IRILQRLVP
Sbjct: 116 AMREMIFHIAALQPVEIDPEAVRPPKRRNVRISKDPQSVAARLRRERISERIRILQRLVP 175
Query: 144 GGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
GGTKMDTASMLDEAI YVKFLK Q++ L+
Sbjct: 176 GGTKMDTASMLDEAIHYVKFLKSQVQSLE 204
>gi|168019991|ref|XP_001762527.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686260|gb|EDQ72650.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 594
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/102 (60%), Positives = 82/102 (80%), Gaps = 5/102 (4%)
Query: 80 EELGAMKEMMYRIAAMQPV-DIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRIL 138
+E +M+ +++R A+ QPV ++ +PKRRN+RIS DPQSVAARHRRE+IS++IR+L
Sbjct: 403 DEFASMRAILFRHAS-QPVPSLEEIASSRPKRRNVRISKDPQSVAARHRRERISDRIRVL 461
Query: 139 QRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ---SNQCN 177
QRLVPGGTKMDTASMLDEAI YVKFLK Q++ L+ +N C+
Sbjct: 462 QRLVPGGTKMDTASMLDEAIHYVKFLKLQLQTLEQIGNNGCD 503
>gi|224084350|ref|XP_002307268.1| predicted protein [Populus trichocarpa]
gi|222856717|gb|EEE94264.1| predicted protein [Populus trichocarpa]
Length = 263
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/93 (70%), Positives = 81/93 (87%)
Query: 85 MKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPG 144
++EM++RIAAMQP IDP +++ PKR+N++IS DPQSVAARHRRE+ISE+IRILQRLVPG
Sbjct: 132 IREMIFRIAAMQPAHIDPESVKPPKRKNVKISKDPQSVAARHRRERISERIRILQRLVPG 191
Query: 145 GTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
GTKMDTASMLDEAI YVKFLK Q++ L+ N
Sbjct: 192 GTKMDTASMLDEAIHYVKFLKMQVQSLEQTGAN 224
>gi|242044912|ref|XP_002460327.1| hypothetical protein SORBIDRAFT_02g026530 [Sorghum bicolor]
gi|241923704|gb|EER96848.1| hypothetical protein SORBIDRAFT_02g026530 [Sorghum bicolor]
Length = 261
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/89 (74%), Positives = 78/89 (87%)
Query: 84 AMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVP 143
AM+E ++ IAA+QPV+IDP +R PKRRN+RIS DPQSVAAR RRE+ISE+IR LQRLVP
Sbjct: 141 AMREAIFHIAALQPVEIDPEAVRPPKRRNVRISKDPQSVAARLRRERISERIRTLQRLVP 200
Query: 144 GGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
GGTKMDTASMLDEAI YVKFLK Q++ L+
Sbjct: 201 GGTKMDTASMLDEAIHYVKFLKSQVQSLE 229
>gi|222632408|gb|EEE64540.1| hypothetical protein OsJ_19392 [Oryza sativa Japonica Group]
Length = 388
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/110 (52%), Positives = 81/110 (73%), Gaps = 13/110 (11%)
Query: 77 EPE-EELGAMKEMMYRIAAMQPVDID------------PTTIRKPKRRNIRISDDPQSVA 123
EP+ E + +KEM+YR AAM+PV + P ++P+R+N+RIS DPQ+VA
Sbjct: 224 EPDTEAIAQVKEMIYRAAAMRPVTLGGAASASDPSFAAPQPPQRPRRKNVRISSDPQTVA 283
Query: 124 ARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
AR RRE++SE++R+LQRLVPGG+KMDTA+MLDEA Y+KFLK Q+ L++
Sbjct: 284 ARLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEALET 333
>gi|226497552|ref|NP_001147658.1| LOC100281267 [Zea mays]
gi|195612888|gb|ACG28274.1| DNA binding protein [Zea mays]
gi|414885734|tpg|DAA61748.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 242
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/89 (74%), Positives = 78/89 (87%)
Query: 84 AMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVP 143
AM+E ++ IAA+QPV+IDP +R PKRRN+RIS DPQSVAAR RRE+ISE+IR LQRLVP
Sbjct: 124 AMREAIFHIAALQPVEIDPEAVRPPKRRNVRISKDPQSVAARLRRERISERIRTLQRLVP 183
Query: 144 GGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
GGTKMDTASMLDEAI YVKFLK Q++ L+
Sbjct: 184 GGTKMDTASMLDEAIHYVKFLKSQVQSLE 212
>gi|449448090|ref|XP_004141799.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
Length = 393
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/103 (65%), Positives = 82/103 (79%), Gaps = 3/103 (2%)
Query: 70 IDQEEDEEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRRE 129
IDQE D E + MKEM+YR AA +PV++ I KPKR+N+RIS DPQ+VAAR RRE
Sbjct: 244 IDQEPDPE---AIAQMKEMIYRAAAFRPVNLGLEMIEKPKRKNVRISSDPQTVAARQRRE 300
Query: 130 KISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
+ISE+IR+LQRLVPGG+KMDTASMLDEA Y+KFLK QI+ L+
Sbjct: 301 RISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLKSQIKALE 343
>gi|414869866|tpg|DAA48423.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 251
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/88 (73%), Positives = 79/88 (89%)
Query: 85 MKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPG 144
M+EM++R+AA+QPV+I+P +R PKRRN RIS DPQSVAAR RRE+ISE+IR+LQRLVPG
Sbjct: 135 MREMVFRVAALQPVNIEPEMVRPPKRRNARISTDPQSVAARVRRERISERIRVLQRLVPG 194
Query: 145 GTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
GTKMDTASMLDEAI YVKFLK Q++ L+
Sbjct: 195 GTKMDTASMLDEAIHYVKFLKTQVQSLE 222
>gi|449458249|ref|XP_004146860.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
Length = 271
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/126 (50%), Positives = 89/126 (70%), Gaps = 4/126 (3%)
Query: 49 QPSS--STLLFGDHNNNNNNNNIIDQEEDEEPEEELGAMKEMMYRIAAMQPVDIDPTTIR 106
QPSS ST L + +++N I+Q D + + + MKE +Y A +PV++ T+
Sbjct: 122 QPSSTNSTTLSPSPSPSSSNIEEIEQAVDRD--QVVSQMKEWIYYAAVFRPVNLGLETVE 179
Query: 107 KPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKR 166
K +R+N+++S +PQ+VAAR RREKISEKIR+LQRLVPGG+KMD SMLDEA Y+KFL+
Sbjct: 180 KKRRKNVKMSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDIGSMLDEAASYLKFLRA 239
Query: 167 QIRLLQ 172
QI+ L+
Sbjct: 240 QIKALE 245
>gi|449476926|ref|XP_004154878.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
Length = 271
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/126 (50%), Positives = 89/126 (70%), Gaps = 4/126 (3%)
Query: 49 QPSS--STLLFGDHNNNNNNNNIIDQEEDEEPEEELGAMKEMMYRIAAMQPVDIDPTTIR 106
QPSS ST L + +++N I+Q D + + + MKE +Y A +PV++ T+
Sbjct: 122 QPSSTNSTTLSPSPSPSSSNIEEIEQAVDRD--QVVSQMKEWIYYAAVFRPVNLGLETVE 179
Query: 107 KPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKR 166
K +R+N+++S +PQ+VAAR RREKISEKIR+LQRLVPGG+KMD SMLDEA Y+KFL+
Sbjct: 180 KKRRKNVKMSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDIGSMLDEAASYLKFLRA 239
Query: 167 QIRLLQ 172
QI+ L+
Sbjct: 240 QIKALE 245
>gi|255549698|ref|XP_002515900.1| DNA binding protein, putative [Ricinus communis]
gi|223544805|gb|EEF46320.1| DNA binding protein, putative [Ricinus communis]
Length = 395
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/148 (50%), Positives = 100/148 (67%), Gaps = 8/148 (5%)
Query: 33 LQTNTQILPSSSRHIIQ-PSSSTLLFGDHNNNNNNNNIIDQEED------EEPE-EELGA 84
LQTN+ R I + PS S L D+ +++N Q EEP+ E +
Sbjct: 200 LQTNSCTTQGGFRLISENPSKSKRLRSDNKKPSSSNINFQQPSSSVSSSIEEPDPEAIAQ 259
Query: 85 MKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPG 144
MKEM+YR AA +PV++ + KPKR+N+RIS DPQ+VAAR RRE+ISE+IR+LQRLVPG
Sbjct: 260 MKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPG 319
Query: 145 GTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
G+KMDTASMLDEA Y+KFL+ Q++ L+
Sbjct: 320 GSKMDTASMLDEAANYLKFLRSQVKALE 347
>gi|168056351|ref|XP_001780184.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668417|gb|EDQ55025.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 484
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/98 (59%), Positives = 76/98 (77%), Gaps = 2/98 (2%)
Query: 85 MKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPG 144
M+ +++R A+ ++ +PKRRN+RIS D QSVAARHRRE+IS++IR+LQRLVPG
Sbjct: 339 MQAILFRQASQLIPTLEDIASSRPKRRNVRISIDTQSVAARHRRERISDRIRVLQRLVPG 398
Query: 145 GTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNIVGDD 182
GTKMDTASMLDEAI Y+KFLK+Q++ L+ Q I G D
Sbjct: 399 GTKMDTASMLDEAIHYIKFLKQQLQTLE--QLGIDGCD 434
>gi|326523389|dbj|BAJ88735.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/103 (60%), Positives = 77/103 (74%), Gaps = 12/103 (11%)
Query: 77 EPE-EELGAMKEMMYRIAAMQPVDI-------DPT---TIRKPKRR-NIRISDDPQSVAA 124
EP+ E + +KEM+YR AAM+P+ DPT + KP+RR N+RIS DPQ+VAA
Sbjct: 250 EPDTEAIAQVKEMIYRAAAMRPLPSLTGASAGDPTHEPSPSKPRRRKNVRISSDPQTVAA 309
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQ 167
R RREK+SE++R LQRLVPGG+KMDTASMLDEA Y+KFLK Q
Sbjct: 310 RLRREKVSERLRALQRLVPGGSKMDTASMLDEAASYLKFLKSQ 352
>gi|359482873|ref|XP_003632856.1| PREDICTED: transcription factor bHLH87-like [Vitis vinifera]
Length = 471
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/99 (61%), Positives = 80/99 (80%), Gaps = 1/99 (1%)
Query: 76 EEPEEE-LGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEK 134
EEP+ E + MKE++YR AA +PV+ + KPKR+N+RIS DPQ+VAAR RRE+ISE+
Sbjct: 328 EEPDSEAIAQMKEIIYRAAAFRPVNFGMDAVEKPKRKNVRISTDPQTVAARQRRERISER 387
Query: 135 IRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
IR+LQRLVPGG KMDTASMLDEA Y+KFL+ Q++ L++
Sbjct: 388 IRVLQRLVPGGNKMDTASMLDEAANYLKFLRSQVKALET 426
>gi|147797615|emb|CAN65002.1| hypothetical protein VITISV_023488 [Vitis vinifera]
Length = 447
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/99 (61%), Positives = 80/99 (80%), Gaps = 1/99 (1%)
Query: 76 EEPEEE-LGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEK 134
EEP+ E + MKE++YR AA +PV+ + KPKR+N+RIS DPQ+VAAR RRE+ISE+
Sbjct: 304 EEPDSEAIAQMKEIIYRAAAFRPVNFGMDAVEKPKRKNVRISTDPQTVAARQRRERISER 363
Query: 135 IRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
IR+LQRLVPGG KMDTASMLDEA Y+KFL+ Q++ L++
Sbjct: 364 IRVLQRLVPGGNKMDTASMLDEAANYLKFLRSQVKALET 402
>gi|449480726|ref|XP_004155978.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH87-like
[Cucumis sativus]
Length = 383
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/99 (63%), Positives = 79/99 (79%), Gaps = 1/99 (1%)
Query: 75 DEEPE-EELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISE 133
D+EP+ E + MKEM+YR AA +PV++ I KPKR+N+RIS DPQ+VAAR RRE+ISE
Sbjct: 245 DQEPDPEAIAQMKEMIYRAAAFRPVNLGLEMIEKPKRKNVRISSDPQTVAARQRRERISE 304
Query: 134 KIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
+IR+LQRLVPGG+KMDTASMLDEA K LK QI+ L+
Sbjct: 305 RIRVLQRLVPGGSKMDTASMLDEAAXLSKVLKSQIKALE 343
>gi|218197191|gb|EEC79618.1| hypothetical protein OsI_20818 [Oryza sativa Indica Group]
Length = 344
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/110 (52%), Positives = 81/110 (73%), Gaps = 13/110 (11%)
Query: 77 EPE-EELGAMKEMMYRIAAMQPVDID------------PTTIRKPKRRNIRISDDPQSVA 123
EP+ E + +KEM+YR AAM+PV + P ++P+R+N+RIS DPQ+VA
Sbjct: 180 EPDTEAIAQVKEMIYRAAAMRPVTLGGAASASDPSSAAPPPPQRPRRKNVRISSDPQTVA 239
Query: 124 ARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
AR RRE++SE++R+LQRLVPGG+KMDTA+MLDEA Y+KFLK Q+ L++
Sbjct: 240 ARLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEALET 289
>gi|168030856|ref|XP_001767938.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680780|gb|EDQ67213.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 527
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 61/66 (92%)
Query: 107 KPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKR 166
+PKRRN+RIS DPQSVAARHRRE+IS+++R+LQ VPGGTKMDTASMLDEAI YVKFL++
Sbjct: 380 RPKRRNVRISKDPQSVAARHRRERISDRVRVLQHFVPGGTKMDTASMLDEAIHYVKFLQQ 439
Query: 167 QIRLLQ 172
Q++ L+
Sbjct: 440 QLQTLE 445
>gi|168023485|ref|XP_001764268.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684420|gb|EDQ70822.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 86
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 73/86 (84%), Gaps = 2/86 (2%)
Query: 84 AMKEMMYRIAAMQPV-DIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLV 142
+++ +++R A+ QP+ ++ +PKRRN+RIS DPQSVAARHRRE+IS++IR+LQRLV
Sbjct: 1 SVRAILFRHAS-QPIPTLEEIASSRPKRRNVRISKDPQSVAARHRRERISDRIRVLQRLV 59
Query: 143 PGGTKMDTASMLDEAIRYVKFLKRQI 168
PGGTKMDTASMLDEAI YVKFLK Q+
Sbjct: 60 PGGTKMDTASMLDEAIHYVKFLKLQL 85
>gi|357454723|ref|XP_003597642.1| Transcription factor bHLH87 [Medicago truncatula]
gi|355486690|gb|AES67893.1| Transcription factor bHLH87 [Medicago truncatula]
Length = 392
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/99 (60%), Positives = 81/99 (81%), Gaps = 2/99 (2%)
Query: 76 EEPE-EELGAMKEMMYRIAAMQPV-DIDPTTIRKPKRRNIRISDDPQSVAARHRREKISE 133
EEP+ E + MKEM+YR AA +PV ++ + KPKR+N++IS DPQ+VAAR RRE+ISE
Sbjct: 255 EEPDPEAIAQMKEMIYRAAAFRPVTNLGLEVMEKPKRKNVKISKDPQTVAARQRRERISE 314
Query: 134 KIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
+IR+LQ++VPGGTKMDTASMLDEA Y+KFL+ Q++ L+
Sbjct: 315 RIRVLQKIVPGGTKMDTASMLDEAANYLKFLRAQVKELE 353
>gi|297724285|ref|NP_001174506.1| Os05g0541400 [Oryza sativa Japonica Group]
gi|255676533|dbj|BAH93234.1| Os05g0541400 [Oryza sativa Japonica Group]
Length = 414
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 80/110 (72%), Gaps = 13/110 (11%)
Query: 77 EPE-EELGAMKEMMYRIAAMQPVDID------------PTTIRKPKRRNIRISDDPQSVA 123
EP+ E + +KEM+YR A M+PV + P ++P+R+N+RIS DPQ+VA
Sbjct: 250 EPDTEAIAQVKEMVYRAAPMRPVTLGGPASASDPSSRPPPPPQRPRRKNVRISSDPQTVA 309
Query: 124 ARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
AR RRE++SE++R+LQRLVPGG+KMDTA+MLDEA Y+KFLK Q+ L++
Sbjct: 310 ARLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEALET 359
>gi|55908877|gb|AAV67820.1| unknown protein [Oryza sativa Japonica Group]
Length = 416
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 80/110 (72%), Gaps = 13/110 (11%)
Query: 77 EPE-EELGAMKEMMYRIAAMQPVDID------------PTTIRKPKRRNIRISDDPQSVA 123
EP+ E + +KEM+YR A M+PV + P ++P+R+N+RIS DPQ+VA
Sbjct: 252 EPDTEAIAQVKEMVYRAAPMRPVTLGGPASASDPSSRPPPPPQRPRRKNVRISSDPQTVA 311
Query: 124 ARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
AR RRE++SE++R+LQRLVPGG+KMDTA+MLDEA Y+KFLK Q+ L++
Sbjct: 312 ARLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEALET 361
>gi|255644404|gb|ACU22707.1| unknown [Glycine max]
Length = 185
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 48/65 (73%), Positives = 59/65 (90%)
Query: 82 LGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRL 141
+ AM+EM++RIA MQPV IDP +I+ PKRRN++IS DPQSVAARHRRE+ISE+I+ILQRL
Sbjct: 121 MAAMREMIFRIAVMQPVHIDPESIKPPKRRNVKISKDPQSVAARHRRERISERIKILQRL 180
Query: 142 VPGGT 146
VPGGT
Sbjct: 181 VPGGT 185
>gi|219363295|ref|NP_001136892.1| uncharacterized protein LOC100217048 [Zea mays]
gi|194697492|gb|ACF82830.1| unknown [Zea mays]
gi|414589607|tpg|DAA40178.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 242
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/96 (67%), Positives = 77/96 (80%), Gaps = 8/96 (8%)
Query: 85 MKEMMYRIAAMQPVDIDPTT--------IRKPKRRNIRISDDPQSVAARHRREKISEKIR 136
M+E ++RIAA+QPV+ TT R PKRRN+R+S DPQSVAAR RRE+ISE+IR
Sbjct: 126 MREAIFRIAALQPVEDQTTTGPEPEAAVRRAPKRRNVRVSKDPQSVAARLRRERISERIR 185
Query: 137 ILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
LQRLVPGGTKMDTASMLDEAI+YVKFLK Q++ LQ
Sbjct: 186 ALQRLVPGGTKMDTASMLDEAIQYVKFLKSQLQSLQ 221
>gi|168042091|ref|XP_001773523.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675225|gb|EDQ61723.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 706
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/57 (80%), Positives = 53/57 (92%)
Query: 107 KPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKF 163
+PKRRN+RIS DPQSVAARHRRE+IS+++R+LQ VPGGTKMDTASMLDEAI YVKF
Sbjct: 502 RPKRRNVRISSDPQSVAARHRRERISDRVRVLQHFVPGGTKMDTASMLDEAIHYVKF 558
>gi|168017686|ref|XP_001761378.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687384|gb|EDQ73767.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 670
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/57 (80%), Positives = 53/57 (92%)
Query: 107 KPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKF 163
+PKRRN+RIS DPQSVAARHRRE+IS+++R+LQ VPGGTKMDTASMLDEAI YVKF
Sbjct: 360 RPKRRNVRISKDPQSVAARHRRERISDRVRVLQHFVPGGTKMDTASMLDEAIHYVKF 416
>gi|357158743|ref|XP_003578226.1| PREDICTED: uncharacterized protein LOC100844721 [Brachypodium
distachyon]
Length = 247
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/97 (63%), Positives = 77/97 (79%), Gaps = 8/97 (8%)
Query: 84 AMKEMMYRIAAMQPV-----DIDPTTIRKP---KRRNIRISDDPQSVAARHRREKISEKI 135
AM+EM++ IAA+QPV D++ +P +RRN+R S DPQSVAAR RRE+ISE+I
Sbjct: 125 AMREMIFHIAALQPVMNDDDDVEAAGAVRPAKKQRRNVRTSKDPQSVAARLRRERISERI 184
Query: 136 RILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
R+LQRLVPGGTKMDTASMLDEAI YVKFLK Q++ L+
Sbjct: 185 RVLQRLVPGGTKMDTASMLDEAIHYVKFLKSQVQSLE 221
>gi|140084395|gb|ABO84937.1| indehiscent 1 [Physcomitrella patens]
Length = 67
Score = 103 bits (256), Expect = 7e-20, Method: Composition-based stats.
Identities = 51/69 (73%), Positives = 60/69 (86%), Gaps = 2/69 (2%)
Query: 114 RISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
RIS DPQSVAARHRRE+IS++IR+LQRLVPGGTKMDTASMLDEAI YVKFLK Q+++ +
Sbjct: 1 RISKDPQSVAARHRRERISDRIRVLQRLVPGGTKMDTASMLDEAIHYVKFLKLQLQVCDT 60
Query: 174 NQCNIVGDD 182
CN+V D
Sbjct: 61 --CNLVPVD 67
>gi|212721432|ref|NP_001131577.1| uncharacterized protein LOC100192921 [Zea mays]
gi|194691908|gb|ACF80038.1| unknown [Zea mays]
gi|414881478|tpg|DAA58609.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|414881479|tpg|DAA58610.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 427
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 77/126 (61%), Gaps = 19/126 (15%)
Query: 111 RNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRL 170
RN+RIS DPQ+VAAR RRE+IS+++R+LQ+LVPGG KMDTASMLDEA Y++FLK Q+R
Sbjct: 314 RNVRISSDPQTVAARQRRERISDRLRVLQKLVPGGAKMDTASMLDEAASYLRFLKSQVRD 373
Query: 171 LQSNQCNIVGDDHYNKLSLGATTNTTIATTTASASAAGALDPILGHSLPFHGNRNSSFYF 230
LQ+ ++ + GA ++ A T A+ ++G SL ++ + F
Sbjct: 374 LQT----------LDRRNYGAASSNDAAATMAA---------VVGSSLSYNRGTGAMPAF 414
Query: 231 NHHEVG 236
G
Sbjct: 415 TFPAAG 420
>gi|167999578|ref|XP_001752494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696394|gb|EDQ82733.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/59 (69%), Positives = 55/59 (93%)
Query: 116 SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSN 174
S +PQSVAARHRR+KISE+IR+L++L+PGG KMDTA+MLDEAI YVKFL+ Q+++L+S+
Sbjct: 387 SVEPQSVAARHRRKKISERIRVLEKLIPGGNKMDTATMLDEAIEYVKFLQLQVQILESD 445
>gi|224091579|ref|XP_002334947.1| predicted protein [Populus trichocarpa]
gi|222875273|gb|EEF12404.1| predicted protein [Populus trichocarpa]
Length = 163
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 56/77 (72%), Gaps = 5/77 (6%)
Query: 112 NIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
+++S DPQSVAAR RR +IS++ +ILQ LVPGGTKMDT SML+EAI YVKFLK Q+ LL
Sbjct: 34 GVKLSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLEEAINYVKFLKTQV-LL 92
Query: 172 QSNQCNIVGD----DHY 184
N V D DHY
Sbjct: 93 HQTIMNFVDDERSLDHY 109
>gi|449461799|ref|XP_004148629.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
gi|449532778|ref|XP_004173357.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
Length = 195
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 51/61 (83%)
Query: 113 IRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
+++S DPQSVAAR RR +IS++ +ILQ LVPGGTKMDT SMLDEAI YVKFLK QI L Q
Sbjct: 46 VKLSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQ 105
Query: 173 S 173
+
Sbjct: 106 T 106
>gi|223702406|gb|ACN21634.1| putative basic helix-loop-helix protein BHLH10 [Lotus japonicus]
Length = 338
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 69/96 (71%), Gaps = 2/96 (2%)
Query: 101 DPTTIR-KPKRRNIRIS-DDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAI 158
D TTI+ K K R+ R S DPQS+ AR RREKI+E+++ILQ LVP GTK+D ++ML+EA+
Sbjct: 236 DSTTIKLKGKSRSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAV 295
Query: 159 RYVKFLKRQIRLLQSNQCNIVGDDHYNKLSLGATTN 194
+YVKFL+ QI+LL S+ + +N +++G N
Sbjct: 296 QYVKFLQLQIKLLSSDDLWMYAPIAFNGMNIGLDLN 331
>gi|147838921|emb|CAN77067.1| hypothetical protein VITISV_022410 [Vitis vinifera]
gi|297735648|emb|CBI18142.3| unnamed protein product [Vitis vinifera]
Length = 161
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 53/68 (77%), Gaps = 1/68 (1%)
Query: 115 ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSN 174
+S DPQSVAAR RR +IS++ +ILQ LVPGGTKMDT SML+EAI YVK+LK QI L Q+
Sbjct: 36 LSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLEEAIHYVKYLKTQIWLHQT- 94
Query: 175 QCNIVGDD 182
N V DD
Sbjct: 95 MINFVDDD 102
>gi|224091024|ref|XP_002309150.1| predicted protein [Populus trichocarpa]
gi|222855126|gb|EEE92673.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/61 (68%), Positives = 51/61 (83%)
Query: 113 IRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
+++S DPQSVAAR RR +IS++ +ILQ LVPGGTKMDT SML+EAI YVKFLK QI L Q
Sbjct: 35 VKLSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLEEAINYVKFLKNQILLHQ 94
Query: 173 S 173
+
Sbjct: 95 T 95
>gi|449447291|ref|XP_004141402.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Query: 107 KPKRRNIRIS-DDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
KPK R R S DPQS+ AR RRE+I+E++RILQ+LVP GTK+D ++ML+EA+ YVKFL+
Sbjct: 234 KPKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQ 293
Query: 166 RQIRLLQSNQCNIVGDDHYNKLSLG 190
QI+LL S+ + YN + +G
Sbjct: 294 LQIKLLSSDDLWMYAPIAYNGMDIG 318
>gi|449515097|ref|XP_004164586.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Query: 107 KPKRRNIRIS-DDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
KPK R R S DPQS+ AR RRE+I+E++RILQ+LVP GTK+D ++ML+EA+ YVKFL+
Sbjct: 234 KPKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQ 293
Query: 166 RQIRLLQSNQCNIVGDDHYNKLSLG 190
QI+LL S+ + YN + +G
Sbjct: 294 LQIKLLSSDDLWMYAPIAYNGMDIG 318
>gi|356534283|ref|XP_003535686.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 63/92 (68%)
Query: 99 DIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAI 158
D P + + R + DPQS+ AR RRE+I+E++RILQ LVP GTK+D ++ML+EA+
Sbjct: 254 DPAPPNLHRKSRATTGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAV 313
Query: 159 RYVKFLKRQIRLLQSNQCNIVGDDHYNKLSLG 190
+YVKFL+ QI+LL S+ + YN +++G
Sbjct: 314 QYVKFLQLQIKLLSSDDLWMYAPIAYNGINIG 345
>gi|168020611|ref|XP_001762836.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685945|gb|EDQ72337.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 72
Score = 90.1 bits (222), Expect = 7e-16, Method: Composition-based stats.
Identities = 41/63 (65%), Positives = 56/63 (88%)
Query: 111 RNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRL 170
+ + S +PQSVAARHRR+KISE+IR+L++L+PGG KMDTA+MLDEAI YVKFL+ Q+++
Sbjct: 10 KPVATSVEPQSVAARHRRKKISERIRVLEKLIPGGNKMDTATMLDEAIEYVKFLQLQVQI 69
Query: 171 LQS 173
L+S
Sbjct: 70 LES 72
>gi|302757065|ref|XP_002961956.1| hypothetical protein SELMODRAFT_403406 [Selaginella moellendorffii]
gi|300170615|gb|EFJ37216.1| hypothetical protein SELMODRAFT_403406 [Selaginella moellendorffii]
Length = 572
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 52/56 (92%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
+PQS+AAR RR+KISE++R L++LVPGG K+DTASMLDEAIR+VKFL+ Q++LL++
Sbjct: 387 EPQSIAARQRRKKISERVRELEKLVPGGNKLDTASMLDEAIRFVKFLQIQVQLLEA 442
>gi|302775426|ref|XP_002971130.1| hypothetical protein SELMODRAFT_411945 [Selaginella moellendorffii]
gi|300161112|gb|EFJ27728.1| hypothetical protein SELMODRAFT_411945 [Selaginella moellendorffii]
Length = 572
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 52/56 (92%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
+PQS+AAR RR+KISE++R L++LVPGG K+DTASMLDEAIR+VKFL+ Q++LL++
Sbjct: 387 EPQSIAARQRRKKISERVRELEKLVPGGNKLDTASMLDEAIRFVKFLQIQVQLLEA 442
>gi|356574311|ref|XP_003555292.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 62/92 (67%)
Query: 99 DIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAI 158
D P + + R + DPQS+ AR RRE+I+E++RILQ LVP GTK+D ++ML+EA+
Sbjct: 254 DPAPPNLDRKSRATTSAAADPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAV 313
Query: 159 RYVKFLKRQIRLLQSNQCNIVGDDHYNKLSLG 190
+YVKFL+ QI+LL S + YN +++G
Sbjct: 314 QYVKFLQLQIKLLSSEDLWMYAPIVYNGINIG 345
>gi|289540888|gb|ADD09565.1| unknown [Trifolium repens]
Length = 290
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 60/89 (67%)
Query: 110 RRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIR 169
R N + DPQS+ AR RREKI+E++R LQ LVP GTK+D ++ML++AI YVKFL+ QI+
Sbjct: 199 RANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTKVDISTMLEDAIHYVKFLQLQIK 258
Query: 170 LLQSNQCNIVGDDHYNKLSLGATTNTTIA 198
LL S+ + YN L +G N I+
Sbjct: 259 LLSSDDMWMYAPIAYNGLDIGVNLNQKIS 287
>gi|289540905|gb|ADD09579.1| unknown [Trifolium repens]
Length = 276
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 60/89 (67%)
Query: 110 RRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIR 169
R N + DPQS+ AR RREKI+E++R LQ LVP GTK+D ++ML++AI YVKFL+ QI+
Sbjct: 185 RANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTKVDISTMLEDAIHYVKFLQLQIK 244
Query: 170 LLQSNQCNIVGDDHYNKLSLGATTNTTIA 198
LL S+ + YN L +G N I+
Sbjct: 245 LLSSDDMWMYAPIAYNGLDIGVNLNQKIS 273
>gi|356553998|ref|XP_003545337.1| PREDICTED: uncharacterized protein LOC100797500 [Glycine max]
Length = 350
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 57/78 (73%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
DPQS+ AR RRE+I+E++RILQ LVP GTK+D ++ML+EA+ YVKFL+ QI+LL S+
Sbjct: 270 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQLQIKLLSSDDLW 329
Query: 178 IVGDDHYNKLSLGATTNT 195
+ YN L +G N+
Sbjct: 330 MYAPLAYNGLDIGLNLNS 347
>gi|449450552|ref|XP_004143026.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
gi|449522833|ref|XP_004168430.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 329
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 59/79 (74%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
DPQS+ AR RRE+I+E++RILQ+LVP GTK+D ++ML+EA+ YVKFL+ QI+LL S++
Sbjct: 246 DPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDEMW 305
Query: 178 IVGDDHYNKLSLGATTNTT 196
+ YN + +G N +
Sbjct: 306 MFAPLAYNGMDIGLQHNLS 324
>gi|297810265|ref|XP_002873016.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297318853|gb|EFH49275.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 898
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 49/66 (74%)
Query: 107 KPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKR 166
K R +S DPQSVAAR RR +ISE+ +ILQ +VPGG KMDT SML+EAIRYVKFLK
Sbjct: 35 KRSRSTSTLSTDPQSVAARERRHRISERFKILQSMVPGGAKMDTVSMLEEAIRYVKFLKA 94
Query: 167 QIRLLQ 172
QI Q
Sbjct: 95 QIWFHQ 100
>gi|34393609|dbj|BAC83262.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|50509377|dbj|BAD30932.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|125600907|gb|EAZ40483.1| hypothetical protein OsJ_24937 [Oryza sativa Japonica Group]
Length = 279
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 63/88 (71%)
Query: 102 PTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYV 161
P++ + R N + DPQS+ AR RRE+I+E++RILQ LVP GTK+D ++ML+EA++YV
Sbjct: 180 PSSKKMGTRANRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYV 239
Query: 162 KFLKRQIRLLQSNQCNIVGDDHYNKLSL 189
KFL+ QI+LL S+ + YN +++
Sbjct: 240 KFLQLQIKLLSSDDTWMYAPIAYNGVNI 267
>gi|357131240|ref|XP_003567247.1| PREDICTED: transcription factor LAX PANICLE-like [Brachypodium
distachyon]
Length = 228
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 52/65 (80%)
Query: 109 KRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQI 168
+R ++S DPQSVAAR RR +IS++ R+L+ LVPGG+KMDT SML++AI YVKFLK Q+
Sbjct: 55 RRPGTKLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV 114
Query: 169 RLLQS 173
L Q+
Sbjct: 115 TLHQA 119
>gi|125558995|gb|EAZ04531.1| hypothetical protein OsI_26681 [Oryza sativa Indica Group]
Length = 279
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 63/88 (71%)
Query: 102 PTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYV 161
P++ + R N + DPQS+ AR RRE+I+E++RILQ LVP GTK+D ++ML+EA++YV
Sbjct: 180 PSSKKMGTRANRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYV 239
Query: 162 KFLKRQIRLLQSNQCNIVGDDHYNKLSL 189
KFL+ QI+LL S+ + YN +++
Sbjct: 240 KFLQLQIKLLSSDDMWMYAPIAYNGVNI 267
>gi|168042242|ref|XP_001773598.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675137|gb|EDQ61636.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
Query: 94 AMQPVDIDPTTIRKPKRRNIRIS-DDPQSVAARHRREKISEKIRILQRLVPGGTKMDTAS 152
AM + I P K R R S DPQSV ARHRREKI+E+++ LQ LVP G K+D +
Sbjct: 426 AMDIIVIGPALNTNGKPRAKRGSATDPQSVYARHRREKINERLKNLQNLVPNGAKVDIVT 485
Query: 153 MLDEAIRYVKFLKRQIRLLQSNQCNIVGDDH-YNKLSL 189
MLDEAI YVKFL+ Q+ LL+S++ + + H YN + +
Sbjct: 486 MLDEAIHYVKFLQTQVELLKSDEFWMFANPHNYNGIDI 523
>gi|51090503|dbj|BAD35705.1| bHLH protein-like [Oryza sativa Japonica Group]
Length = 211
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 51/58 (87%)
Query: 115 ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
+S +PQSVAAR RRE++S+++R LQRLVPGG ++DTASML+EAIRYVKFLK ++ L+
Sbjct: 120 VSSEPQSVAARLRRERVSQRMRALQRLVPGGARLDTASMLEEAIRYVKFLKGHVQSLE 177
>gi|227016421|gb|ACP18672.1| barren stalk1-like protein [Leymus cinereus x Leymus triticoides]
Length = 211
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%), Gaps = 6/73 (8%)
Query: 114 RISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
++S DPQSVAAR RR +IS++ R+L+ LVPGG+KMDT SML++AI YVKFLK Q+ L Q+
Sbjct: 52 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVSLHQA 111
Query: 174 ------NQCNIVG 180
C VG
Sbjct: 112 ALVQHEEGCGGVG 124
>gi|242086066|ref|XP_002443458.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
gi|241944151|gb|EES17296.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
Length = 316
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 68/102 (66%), Gaps = 4/102 (3%)
Query: 93 AAMQPVDIDPTT-IRKPK---RRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKM 148
A+++ D D R+PK R + +PQS+ AR RRE+I+E+++ILQ LVP GTK+
Sbjct: 206 ASLESADGDGDADARRPKGKGRAGRSATTEPQSIYARKRRERINERLKILQNLVPNGTKV 265
Query: 149 DTASMLDEAIRYVKFLKRQIRLLQSNQCNIVGDDHYNKLSLG 190
D ++ML+EA+ YVKFL+ QIRLL S+ + YN +++G
Sbjct: 266 DISTMLEEAVHYVKFLQLQIRLLSSDDTWMYAPIAYNGMNIG 307
>gi|227016419|gb|ACP18671.1| barren stalk1-like protein [Leymus cinereus x Leymus triticoides]
Length = 211
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%), Gaps = 6/73 (8%)
Query: 114 RISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
++S DPQSVAAR RR +IS++ R+L+ LVPGG+KMDT SML++AI YVKFLK Q+ L Q+
Sbjct: 52 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVSLHQA 111
Query: 174 ------NQCNIVG 180
C VG
Sbjct: 112 ALVQHEEGCGGVG 124
>gi|18396475|ref|NP_564293.1| transcription factor bHLH54 [Arabidopsis thaliana]
gi|75301354|sp|Q8LEG1.1|BH054_ARATH RecName: Full=Transcription factor bHLH54; AltName: Full=Basic
helix-loop-helix protein 54; Short=AtbHLH54; Short=bHLH
54; AltName: Full=Transcription factor EN 114; AltName:
Full=bHLH transcription factor bHLH054
gi|21553570|gb|AAM62663.1| unknown [Arabidopsis thaliana]
gi|225897974|dbj|BAH30319.1| hypothetical protein [Arabidopsis thaliana]
gi|332192750|gb|AEE30871.1| transcription factor bHLH54 [Arabidopsis thaliana]
Length = 258
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 60/88 (68%)
Query: 103 TTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVK 162
T+++ R + DPQS+ AR RREKI+E+++ LQ LVP GTK+D ++ML+EA+ YVK
Sbjct: 161 TSVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVK 220
Query: 163 FLKRQIRLLQSNQCNIVGDDHYNKLSLG 190
FL+ QI+LL S+ + YN L +G
Sbjct: 221 FLQLQIKLLSSDDLWMYAPLAYNGLDMG 248
>gi|449469332|ref|XP_004152375.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
gi|449530384|ref|XP_004172175.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 341
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 56/73 (76%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
DPQS+ AR RRE+I+E++RILQ LVP GTK+D ++ML+EA++YVKFL+ QI+LL S+
Sbjct: 256 DPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLW 315
Query: 178 IVGDDHYNKLSLG 190
+ YN + +G
Sbjct: 316 MYAPIAYNGMDIG 328
>gi|357480671|ref|XP_003610621.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355511956|gb|AES93579.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 331
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 57/73 (78%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
DPQS+ AR RRE+I+E+++ILQ LVP GTK+D ++ML+EA++YVKFL+ QI+LL S+
Sbjct: 233 DPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDTW 292
Query: 178 IVGDDHYNKLSLG 190
+ YN +++G
Sbjct: 293 MYSPIAYNGMNIG 305
>gi|449438623|ref|XP_004137087.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
gi|449495759|ref|XP_004159936.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
Length = 279
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 56/73 (76%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
DPQS+ AR RRE+I+E++RILQ LVP GTK+D ++ML+EA++YVKFL+ QI+LL S+
Sbjct: 193 DPQSLYARKRRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLW 252
Query: 178 IVGDDHYNKLSLG 190
+ YN + +G
Sbjct: 253 MYAPIAYNGMDIG 265
>gi|125554507|gb|EAZ00113.1| hypothetical protein OsI_22119 [Oryza sativa Indica Group]
Length = 201
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 51/58 (87%)
Query: 115 ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
+S +PQSVAAR RRE++S+++R LQRLVPGG ++DTASML+EAIRYVKFLK ++ L+
Sbjct: 121 VSSEPQSVAARLRRERVSQRMRALQRLVPGGARLDTASMLEEAIRYVKFLKGHVQSLE 178
>gi|297845732|ref|XP_002890747.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336589|gb|EFH67006.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 60/88 (68%)
Query: 103 TTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVK 162
T+++ R + DPQS+ AR RREKI+E+++ LQ LVP GTK+D ++ML+EA+ YVK
Sbjct: 161 TSVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVK 220
Query: 163 FLKRQIRLLQSNQCNIVGDDHYNKLSLG 190
FL+ QI+LL S+ + YN L +G
Sbjct: 221 FLQLQIKLLSSDDLWMYAPLAYNGLDMG 248
>gi|357115803|ref|XP_003559675.1| PREDICTED: uncharacterized protein LOC100838948 [Brachypodium
distachyon]
Length = 307
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 62/87 (71%)
Query: 108 PKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQ 167
P + + + DPQS+ AR RRE+I+E++++LQ LVP GTK+D ++ML+EA++YVKFL+ Q
Sbjct: 217 PSGKGRQSTTDPQSLYARKRRERINERLKVLQNLVPNGTKVDISTMLEEAVQYVKFLQLQ 276
Query: 168 IRLLQSNQCNIVGDDHYNKLSLGATTN 194
I+LL S+ + YN +++G N
Sbjct: 277 IKLLSSDDMWMYAPIAYNGMNIGVDLN 303
>gi|224103739|ref|XP_002313175.1| predicted protein [Populus trichocarpa]
gi|222849583|gb|EEE87130.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 55/73 (75%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
DPQS+ AR RRE+I+E++RILQ LVP GTK+D ++ML+EA++YVKFL+ QI+LL S
Sbjct: 273 DPQSLYARKRRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSEDLW 332
Query: 178 IVGDDHYNKLSLG 190
+ YN + +G
Sbjct: 333 MYAPIAYNGMDIG 345
>gi|227016424|gb|ACP18673.1| barren stalk1-like protein [Leymus triticoides]
Length = 158
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 54/77 (70%), Gaps = 6/77 (7%)
Query: 114 RISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
++S DPQSVAAR RR +IS++ R+L+ LVPGG+KMDT SML++AI YVKFLK Q+ L Q+
Sbjct: 51 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVSLHQA 110
Query: 174 ------NQCNIVGDDHY 184
C VG +
Sbjct: 111 ALVQHEEGCGGVGHGEF 127
>gi|162459126|ref|NP_001105271.1| barren stalk1 [Zea mays]
gi|56384213|gb|AAV85767.1| barren stalk1 [Zea mays]
gi|56384215|gb|AAV85768.1| barren stalk1 [Zea mays]
gi|223946525|gb|ACN27346.1| unknown [Zea mays]
gi|414879869|tpg|DAA57000.1| TPA: barren stalk1 [Zea mays]
Length = 219
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 65/105 (61%), Gaps = 7/105 (6%)
Query: 114 RISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
++S DPQSVAAR RR +IS++ R+L+ LVPGG+KMDT SML++AI YVKFLK QI L
Sbjct: 51 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKTQISL--- 107
Query: 174 NQCNIVGDDHYNKLSLGATTNTTIA----TTTASASAAGALDPIL 214
+Q ++ + L A + + T AS GA D ++
Sbjct: 108 HQAALMQHEEGCHAELAAYSAVAVVGDNEVTLASHGRTGACDEMM 152
>gi|42569042|ref|NP_179083.2| transcription factor bHLH84 [Arabidopsis thaliana]
gi|75296240|sp|Q7XHI9.1|BH084_ARATH RecName: Full=Transcription factor bHLH84; AltName: Full=Basic
helix-loop-helix protein 84; Short=AtbHLH84; Short=bHLH
84; AltName: Full=bHLH transcription factor bHLH084
gi|33111969|emb|CAE12171.1| putative bHLH084 transcription factor [Arabidopsis thaliana]
gi|91806168|gb|ABE65812.1| basic helix-loop-helix protein/bHLH protein [Arabidopsis thaliana]
gi|330251237|gb|AEC06331.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 328
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 56/73 (76%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
DPQS+ AR RRE+I+E++RILQ LVP GTK+D ++ML+EA++YVKFL+ QI+LL S+
Sbjct: 246 DPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLW 305
Query: 178 IVGDDHYNKLSLG 190
+ YN + +G
Sbjct: 306 MYAPIAYNGMDIG 318
>gi|227016415|gb|ACP18669.1| barren stalk1-like protein [Leymus cinereus]
Length = 149
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 114 RISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
++S DPQSVAAR RR +IS++ R+L+ LVPGG+KMDT SML++AI YVKFLK Q+ L Q+
Sbjct: 52 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVSLHQA 111
Query: 174 ------NQCNIVGDDHYNKLSLGATTNTT 196
C VG + GA T
Sbjct: 112 ALVQHEEGCGGVGHGEFA----GAAGEVT 136
>gi|224060782|ref|XP_002300268.1| predicted protein [Populus trichocarpa]
gi|222847526|gb|EEE85073.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 55/73 (75%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
DPQS+ AR RRE+I+E++RILQ LVP GTK+D ++ML+EA++YVKFL+ QI+LL S
Sbjct: 233 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSEDLW 292
Query: 178 IVGDDHYNKLSLG 190
+ YN + +G
Sbjct: 293 MYAPIAYNGMDIG 305
>gi|116831075|gb|ABK28492.1| unknown [Arabidopsis thaliana]
Length = 329
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 56/73 (76%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
DPQS+ AR RRE+I+E++RILQ LVP GTK+D ++ML+EA++YVKFL+ QI+LL S+
Sbjct: 246 DPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLW 305
Query: 178 IVGDDHYNKLSLG 190
+ YN + +G
Sbjct: 306 MYAPIAYNGMDIG 318
>gi|255573157|ref|XP_002527508.1| DNA binding protein, putative [Ricinus communis]
gi|223533148|gb|EEF34906.1| DNA binding protein, putative [Ricinus communis]
Length = 296
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 55/73 (75%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
DPQS+ AR RRE+I+E++RILQ LVP GTK+D ++ML+EA+ YVKFL+ QI+LL S+
Sbjct: 216 DPQSIYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLW 275
Query: 178 IVGDDHYNKLSLG 190
+ YN + +G
Sbjct: 276 MYAPLAYNGMDIG 288
>gi|77556960|gb|ABA99756.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125537220|gb|EAY83708.1| hypothetical protein OsI_38930 [Oryza sativa Indica Group]
gi|125579902|gb|EAZ21048.1| hypothetical protein OsJ_36693 [Oryza sativa Japonica Group]
Length = 304
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 63/95 (66%), Gaps = 1/95 (1%)
Query: 101 DPTTIRKPKRRNIR-ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIR 159
D K K R R + DPQS+ AR RRE+I+E+++ LQ LVP GTK+D ++ML+EA+
Sbjct: 207 DAGATSKGKSRAGRGAATDPQSLYARKRRERINERLKTLQNLVPNGTKVDISTMLEEAVH 266
Query: 160 YVKFLKRQIRLLQSNQCNIVGDDHYNKLSLGATTN 194
YVKFL+ QI+LL S++ + YN +++G N
Sbjct: 267 YVKFLQLQIKLLSSDEMWMYAPIAYNGMNIGLDLN 301
>gi|357444405|ref|XP_003592480.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481528|gb|AES62731.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 330
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 62/90 (68%)
Query: 105 IRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFL 164
++ R N + DPQ V A+ RRE+I+E+++ILQ LVP GTK+D ++ML+EA++YVKFL
Sbjct: 234 LKGKSRCNGGSASDPQGVYAKKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFL 293
Query: 165 KRQIRLLQSNQCNIVGDDHYNKLSLGATTN 194
+ QI+LL S+ + YN +++G N
Sbjct: 294 QVQIKLLSSDDHWMYAPIAYNGMNIGLNLN 323
>gi|242059137|ref|XP_002458714.1| hypothetical protein SORBIDRAFT_03g038820 [Sorghum bicolor]
gi|241930689|gb|EES03834.1| hypothetical protein SORBIDRAFT_03g038820 [Sorghum bicolor]
Length = 232
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 50/62 (80%)
Query: 112 NIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++S DPQSVAAR RR +IS++ R+L+ LVPGG+KMDT SML++AI YVKFLK QI L
Sbjct: 54 GAKLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQISLH 113
Query: 172 QS 173
Q+
Sbjct: 114 QA 115
>gi|255538082|ref|XP_002510106.1| transcription factor, putative [Ricinus communis]
gi|223550807|gb|EEF52293.1| transcription factor, putative [Ricinus communis]
Length = 327
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 56/73 (76%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
DPQS+ AR RRE+I+E++RILQ LVP GTK+D ++ML+EA++YVKFL+ QI+LL S+
Sbjct: 246 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLW 305
Query: 178 IVGDDHYNKLSLG 190
+ YN + +G
Sbjct: 306 MYAPIAYNGMDIG 318
>gi|296083058|emb|CBI22462.3| unnamed protein product [Vitis vinifera]
Length = 350
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query: 107 KPKRRNIRIS-DDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
K K R R S DPQS+ AR RRE+I+E+++ILQ LVP GTK+D ++ML+EA+ YVKFL+
Sbjct: 256 KDKARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVEYVKFLQ 315
Query: 166 RQIRLLQSNQCNIVGDDHYNKLSLG 190
QI+LL S+ + YN + +G
Sbjct: 316 LQIKLLSSDDLWMYAPLAYNGMDIG 340
>gi|125544879|gb|EAY91018.1| hypothetical protein OsI_12623 [Oryza sativa Indica Group]
Length = 310
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 61/83 (73%)
Query: 114 RISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
R + DPQS+ AR RRE+I+E+++ILQ LVP GTK+D ++ML+EA+ YVKFL+ QI+LL S
Sbjct: 226 RSATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAMHYVKFLQLQIKLLSS 285
Query: 174 NQCNIVGDDHYNKLSLGATTNTT 196
++ + YN +++G N +
Sbjct: 286 DEMWMYAPIAYNGMNIGIDLNLS 308
>gi|115454133|ref|NP_001050667.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|50428697|gb|AAT77048.1| putative transcription factor [Oryza sativa Japonica Group]
gi|108709850|gb|ABF97645.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|113549138|dbj|BAF12581.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|125587132|gb|EAZ27796.1| hypothetical protein OsJ_11741 [Oryza sativa Japonica Group]
Length = 310
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 61/83 (73%)
Query: 114 RISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
R + DPQS+ AR RRE+I+E+++ILQ LVP GTK+D ++ML+EA+ YVKFL+ QI+LL S
Sbjct: 226 RSATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAMHYVKFLQLQIKLLSS 285
Query: 174 NQCNIVGDDHYNKLSLGATTNTT 196
++ + YN +++G N +
Sbjct: 286 DEMWMYAPIAYNGMNIGIDLNLS 308
>gi|356562241|ref|XP_003549380.1| PREDICTED: uncharacterized protein LOC100780907 [Glycine max]
Length = 353
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 57/78 (73%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
DPQS+ AR RRE+I+E++RILQ LVP GTK+D ++ML+EA+ YVKFL+ QI+LL S+
Sbjct: 273 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQLQIKLLSSDDLW 332
Query: 178 IVGDDHYNKLSLGATTNT 195
+ +N L +G N+
Sbjct: 333 MYAPFAHNGLDIGLNLNS 350
>gi|357506069|ref|XP_003623323.1| LAX [Medicago truncatula]
gi|355498338|gb|AES79541.1| LAX [Medicago truncatula]
Length = 153
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 56/71 (78%), Gaps = 2/71 (2%)
Query: 115 ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS- 173
+S DPQSVAAR RR +IS++ +ILQ ++PGG+K+DT SML+EAI YVKFLK+QI L ++
Sbjct: 32 LSTDPQSVAARERRHRISDRFKILQSMIPGGSKLDTVSMLEEAIHYVKFLKKQIWLHETL 91
Query: 174 -NQCNIVGDDH 183
N + +G+ H
Sbjct: 92 INFVDDIGESH 102
>gi|147805319|emb|CAN71946.1| hypothetical protein VITISV_007899 [Vitis vinifera]
Length = 380
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 55/73 (75%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
DPQS+ AR RRE+I+E++RILQ LVP GTK+D ++ML+EA+ YVKFL+ QI+LL S+
Sbjct: 296 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDMW 355
Query: 178 IVGDDHYNKLSLG 190
+ YN + +G
Sbjct: 356 MYAPIAYNGMDIG 368
>gi|225458820|ref|XP_002283302.1| PREDICTED: transcription factor bHLH84 [Vitis vinifera]
Length = 380
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 55/73 (75%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
DPQS+ AR RRE+I+E++RILQ LVP GTK+D ++ML+EA+ YVKFL+ QI+LL S+
Sbjct: 296 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDMW 355
Query: 178 IVGDDHYNKLSLG 190
+ YN + +G
Sbjct: 356 MYAPIAYNGMDIG 368
>gi|115440839|ref|NP_001044699.1| Os01g0831000 [Oryza sativa Japonica Group]
gi|68565366|sp|Q7XAQ6.1|LAX_ORYSJ RecName: Full=Transcription factor LAX PANICLE
gi|33342172|dbj|BAC80247.1| transcription factor [Oryza sativa Japonica Group]
gi|56785174|dbj|BAD81850.1| transcription factor [Oryza sativa Japonica Group]
gi|113534230|dbj|BAF06613.1| Os01g0831000 [Oryza sativa Japonica Group]
gi|342674132|gb|AEL31274.1| LAX protein [Oryza sativa Japonica Group]
Length = 215
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 50/60 (83%)
Query: 114 RISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
++S DPQSVAAR RR +IS++ R+L+ LVPGG+KMDT SML++AI YVKFLK Q+ L Q+
Sbjct: 39 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVTLHQA 98
>gi|62466473|gb|AAX83562.1| LAX [Oryza barthii]
gi|62466475|gb|AAX83563.1| LAX [Oryza meridionalis]
gi|62466477|gb|AAX83564.1| LAX [Oryza longistaminata]
gi|62466479|gb|AAX83565.1| LAX [Oryza glumipatula]
gi|62466481|gb|AAX83566.1| LAX [Oryza nivara]
gi|62466483|gb|AAX83567.1| LAX [Oryza rufipogon]
gi|62466485|gb|AAX83568.1| LAX [Oryza sativa Japonica Group]
gi|62466487|gb|AAX83569.1| LAX [Oryza sativa Japonica Group]
gi|62466489|gb|AAX83570.1| LAX [Oryza sativa Japonica Group]
gi|62466493|gb|AAX83572.1| LAX [Oryza sativa Japonica Group]
gi|62466495|gb|AAX83573.1| LAX [Oryza sativa Indica Group]
gi|62466497|gb|AAX83574.1| LAX [Oryza sativa Indica Group]
gi|62466501|gb|AAX83576.1| LAX [Oryza sativa Indica Group]
gi|62466511|gb|AAX83581.1| LAX [Oryza sativa Indica Group]
gi|62466517|gb|AAX83584.1| LAX [Oryza rufipogon]
Length = 189
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 50/60 (83%)
Query: 114 RISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
++S DPQSVAAR RR +IS++ R+L+ LVPGG+KMDT SML++AI YVKFLK Q+ L Q+
Sbjct: 23 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVTLHQA 82
>gi|62466521|gb|AAX83586.1| LAX [Oryza rufipogon]
Length = 190
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 50/60 (83%)
Query: 114 RISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
++S DPQSVAAR RR +IS++ R+L+ LVPGG+KMDT SML++AI YVKFLK Q+ L Q+
Sbjct: 23 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVTLHQA 82
>gi|147866312|emb|CAN79863.1| hypothetical protein VITISV_021999 [Vitis vinifera]
Length = 346
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query: 107 KPKRRNIRIS-DDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
K K R R S DPQS+ AR RRE+I+E+++ILQ LVP GTK+D ++ML+EA+ YVKFL+
Sbjct: 252 KDKARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVEYVKFLQ 311
Query: 166 RQIRLLQSNQCNIVGDDHYNKLSLG 190
QI+LL S+ + YN + +G
Sbjct: 312 LQIKLLSSDDLWMYAPLAYNGMDIG 336
>gi|62466519|gb|AAX83585.1| LAX [Oryza rufipogon]
Length = 189
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 50/60 (83%)
Query: 114 RISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
++S DPQSVAAR RR +IS++ R+L+ LVPGG+KMDT SML++AI YVKFLK Q+ L Q+
Sbjct: 23 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVTLHQA 82
>gi|225428979|ref|XP_002264083.1| PREDICTED: transcription factor bHLH84-like [Vitis vinifera]
Length = 345
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query: 107 KPKRRNIRIS-DDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
K K R R S DPQS+ AR RRE+I+E+++ILQ LVP GTK+D ++ML+EA+ YVKFL+
Sbjct: 251 KDKARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVEYVKFLQ 310
Query: 166 RQIRLLQSNQCNIVGDDHYNKLSLG 190
QI+LL S+ + YN + +G
Sbjct: 311 LQIKLLSSDDLWMYAPLAYNGMDIG 335
>gi|62466523|gb|AAX83587.1| LAX [Oryza rufipogon]
Length = 189
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 50/60 (83%)
Query: 114 RISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
++S DPQSVAAR RR +IS++ R+L+ LVPGG+KMDT SML++AI YVKFLK Q+ L Q+
Sbjct: 23 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVTLHQA 82
>gi|62466491|gb|AAX83571.1| LAX [Oryza sativa Japonica Group]
gi|62466499|gb|AAX83575.1| LAX [Oryza sativa Indica Group]
gi|62466503|gb|AAX83577.1| LAX [Oryza sativa Indica Group]
gi|62466505|gb|AAX83578.1| LAX [Oryza sativa Indica Group]
gi|62466507|gb|AAX83579.1| LAX [Oryza sativa Indica Group]
gi|62466509|gb|AAX83580.1| LAX [Oryza sativa Indica Group]
gi|62466513|gb|AAX83582.1| LAX [Oryza rufipogon]
gi|62466515|gb|AAX83583.1| LAX [Oryza rufipogon]
Length = 189
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 50/60 (83%)
Query: 114 RISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
++S DPQSVAAR RR +IS++ R+L+ LVPGG+KMDT SML++AI YVKFLK Q+ L Q+
Sbjct: 23 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVTLHQA 82
>gi|302142209|emb|CBI19412.3| unnamed protein product [Vitis vinifera]
Length = 186
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 56/75 (74%)
Query: 116 SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
+ DPQS+ AR RRE+I+E++RILQ LVP GTK+D ++ML+EA+ YVKFL+ QI+LL S+
Sbjct: 100 ATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDD 159
Query: 176 CNIVGDDHYNKLSLG 190
+ YN + +G
Sbjct: 160 MWMYAPIAYNGMDIG 174
>gi|168021524|ref|XP_001763291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685426|gb|EDQ71821.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 537
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 94 AMQPVDIDPT--TIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTA 151
AM+ I P T KP+ R +D PQSV ARHRREKI+E+++ LQ LVP G K+D
Sbjct: 426 AMEIYAIGPALNTNGKPRARRGSATD-PQSVYARHRREKINERLKTLQHLVPNGAKVDIV 484
Query: 152 SMLDEAIRYVKFLKRQIRLLQSNQ 175
+MLDEAI YV+FL+ Q+ LL+S++
Sbjct: 485 TMLDEAIHYVQFLQLQVTLLKSDE 508
>gi|242050734|ref|XP_002463111.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
gi|241926488|gb|EER99632.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
Length = 282
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 56/73 (76%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
DPQS+ AR RRE+I+E++RILQ+LVP GTK+D ++ML+EA +YVKFL+ QI+LL S+
Sbjct: 199 DPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAAQYVKFLQLQIKLLSSDDTW 258
Query: 178 IVGDDHYNKLSLG 190
+ YN +++
Sbjct: 259 MYAPIAYNGINIS 271
>gi|15240948|ref|NP_195751.1| aprataxin [Arabidopsis thaliana]
gi|75335734|sp|Q9M041.1|BH140_ARATH RecName: Full=Transcription factor bHLH140; AltName: Full=Basic
helix-loop-helix protein 140; Short=AtbHLH140;
Short=bHLH 140; AltName: Full=Transcription factor EN
122; AltName: Full=bHLH transcription factor bHLH140
gi|7320709|emb|CAB81914.1| putative protein [Arabidopsis thaliana]
gi|332002943|gb|AED90326.1| aprataxin [Arabidopsis thaliana]
Length = 912
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 47/62 (75%)
Query: 107 KPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKR 166
K R +S DPQSVAAR RR +IS++ +ILQ +VPGG KMDT SMLDEAI YVKFLK
Sbjct: 35 KRSRSTSTLSTDPQSVAARDRRHRISDRFKILQSMVPGGAKMDTVSMLDEAISYVKFLKA 94
Query: 167 QI 168
QI
Sbjct: 95 QI 96
>gi|20127093|gb|AAM10959.1|AF488616_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 352
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 55/73 (75%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
DPQS+ AR RRE+I+E++RILQ LVP GTK+D ++ML+EA+ YVKFL+ QI+LL S+
Sbjct: 275 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLW 334
Query: 178 IVGDDHYNKLSLG 190
+ +N + +G
Sbjct: 335 MYAPIAFNGMDIG 347
>gi|30689839|ref|NP_195114.2| transcription factor bHLH85 [Arabidopsis thaliana]
gi|75298259|sp|Q84WK0.1|BH085_ARATH RecName: Full=Transcription factor bHLH85; AltName: Full=Basic
helix-loop-helix protein 85; Short=AtbHLH85; Short=bHLH
85; AltName: Full=Transcription factor EN 115; AltName:
Full=bHLH transcription factor bHLH085
gi|27808578|gb|AAO24569.1| At4g33880 [Arabidopsis thaliana]
gi|110736194|dbj|BAF00068.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332660887|gb|AEE86287.1| transcription factor bHLH85 [Arabidopsis thaliana]
Length = 352
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 57/76 (75%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
DPQS+ AR RRE+I+E++RILQ LVP GTK+D ++ML+EA+ YVKFL+ QI+LL S+
Sbjct: 275 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLW 334
Query: 178 IVGDDHYNKLSLGATT 193
+ +N + +G ++
Sbjct: 335 MYAPIAFNGMDIGLSS 350
>gi|357444407|ref|XP_003592481.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481529|gb|AES62732.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 287
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 55/73 (75%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
D QS+ AR RRE+I+E++RILQ LVP GTK+D ++ML+EA++YVKFL+ QI+LL S
Sbjct: 205 DAQSIYARKRRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSEDMW 264
Query: 178 IVGDDHYNKLSLG 190
+ YN +++G
Sbjct: 265 MYAPIAYNGMNIG 277
>gi|297798526|ref|XP_002867147.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
gi|297312983|gb|EFH43406.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
Length = 351
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 57/76 (75%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
DPQS+ AR RRE+I+E++RILQ LVP GTK+D ++ML+EA+ YVKFL+ QI+LL S+
Sbjct: 274 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLW 333
Query: 178 IVGDDHYNKLSLGATT 193
+ +N + +G ++
Sbjct: 334 MYAPIAFNGMDIGLSS 349
>gi|3297812|emb|CAA19870.1| putative protein [Arabidopsis thaliana]
gi|7270337|emb|CAB80105.1| putative protein [Arabidopsis thaliana]
Length = 349
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 57/76 (75%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
DPQS+ AR RRE+I+E++RILQ LVP GTK+D ++ML+EA+ YVKFL+ QI+LL S+
Sbjct: 272 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLW 331
Query: 178 IVGDDHYNKLSLGATT 193
+ +N + +G ++
Sbjct: 332 MYAPIAFNGMDIGLSS 347
>gi|326527333|dbj|BAK04608.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 49/60 (81%)
Query: 114 RISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
++S DPQSVAAR RR +IS++ R+L+ LVPGG+KMD SML++AI YVKFLK Q+ L Q+
Sbjct: 52 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDNVSMLEQAIHYVKFLKAQVSLHQA 111
>gi|125528258|gb|EAY76372.1| hypothetical protein OsI_04303 [Oryza sativa Indica Group]
Length = 223
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 50/60 (83%)
Query: 114 RISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
++S DPQSVAAR RR +IS++ R+L+ LVPGG+KM+T SML++AI YVKFLK Q+ L Q+
Sbjct: 47 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMETVSMLEQAIHYVKFLKAQVTLHQA 106
>gi|414877782|tpg|DAA54913.1| TPA: hypothetical protein ZEAMMB73_144255 [Zea mays]
Length = 304
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 55/73 (75%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
+PQS+ AR RRE+I+E++++LQ LVP GTK+D ++ML+EA+ YVKFL+ QIRLL S+
Sbjct: 222 EPQSIYARKRRERINERLKVLQSLVPNGTKVDMSTMLEEAVHYVKFLQLQIRLLSSDDTW 281
Query: 178 IVGDDHYNKLSLG 190
+ YN + +G
Sbjct: 282 MYAPIAYNGMGIG 294
>gi|357161826|ref|XP_003579215.1| PREDICTED: transcription factor bHLH139-like [Brachypodium
distachyon]
Length = 301
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
Query: 101 DPTTIRKPKRRNIR-ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIR 159
D K K R R S DPQS+ AR RRE+I+E+++ LQ LVP GTK+D ++ML+EA+
Sbjct: 206 DTGVCPKGKARAARGASTDPQSLYARKRRERINERLKTLQTLVPNGTKVDMSTMLEEAVH 265
Query: 160 YVKFLKRQIRLLQSNQCNIVGDDHYNKLSLGATTN 194
YVKFL+ QI++L S+ + YN +++G N
Sbjct: 266 YVKFLQLQIKVLSSDDMWMYAPLAYNGMNIGLDLN 300
>gi|242033665|ref|XP_002464227.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
gi|241918081|gb|EER91225.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
Length = 300
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 60/83 (72%)
Query: 114 RISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
R + + QS+ AR RRE+I+E++RILQ LVP GTK+D ++ML+EA+ YVKFL+ QI+LL S
Sbjct: 215 RSATESQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSS 274
Query: 174 NQCNIVGDDHYNKLSLGATTNTT 196
++ + YN +++G N +
Sbjct: 275 DEMWMYAPIAYNGMNIGIDLNLS 297
>gi|356499097|ref|XP_003518380.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 295
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 63/92 (68%), Gaps = 4/92 (4%)
Query: 84 AMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVP 143
+M E M A +P T+ K + + DPQSVAA++RRE+ISE+++ILQ LVP
Sbjct: 181 SMGENMQATNAKKPC----TSASKAAKPKLNPFKDPQSVAAKNRRERISERLKILQELVP 236
Query: 144 GGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
G+K+D +ML++AI YVKFL+ Q+++L +++
Sbjct: 237 NGSKVDLVTMLEKAISYVKFLQLQVKVLAADE 268
>gi|357151466|ref|XP_003575800.1| PREDICTED: putative transcription factor bHLH086-like [Brachypodium
distachyon]
Length = 256
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 60/79 (75%)
Query: 114 RISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
R S + QS+ A+ RRE+I+EK+R+LQ+L+P GTK+D ++ML+EA++YVKFL+ QI++L S
Sbjct: 168 RPSKNMQSLYAKKRRERINEKLRVLQQLIPNGTKVDISTMLEEAVQYVKFLQLQIKVLSS 227
Query: 174 NQCNIVGDDHYNKLSLGAT 192
++ + YN + +G T
Sbjct: 228 DETWMYAPLAYNGMDIGLT 246
>gi|218186081|gb|EEC68508.1| hypothetical protein OsI_36777 [Oryza sativa Indica Group]
gi|222616287|gb|EEE52419.1| hypothetical protein OsJ_34535 [Oryza sativa Japonica Group]
Length = 258
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 60/80 (75%)
Query: 110 RRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIR 169
R + + S D QS+ A+ RRE+I+E++RILQ+LVP GTK+D ++ML+EA++YVKFL+ QI+
Sbjct: 168 RGHKQCSKDTQSLYAKRRRERINERLRILQQLVPNGTKVDISTMLEEAVQYVKFLQLQIK 227
Query: 170 LLQSNQCNIVGDDHYNKLSL 189
LL S+ + YN +++
Sbjct: 228 LLSSDDTWMFAPLAYNGMNM 247
>gi|77552099|gb|ABA94896.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 246
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 60/80 (75%)
Query: 110 RRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIR 169
R + + S D QS+ A+ RRE+I+E++RILQ+LVP GTK+D ++ML+EA++YVKFL+ QI+
Sbjct: 156 RGHKQCSKDTQSLYAKRRRERINERLRILQQLVPNGTKVDISTMLEEAVQYVKFLQLQIK 215
Query: 170 LLQSNQCNIVGDDHYNKLSL 189
LL S+ + YN +++
Sbjct: 216 LLSSDDTWMFAPLAYNGMNM 235
>gi|297836114|ref|XP_002885939.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
gi|297331779|gb|EFH62198.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 55/73 (75%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
DPQS+ AR RRE+I+E++RILQ LVP GTK+ ++ML+EA++YVKFL+ QI+LL S+
Sbjct: 246 DPQSLYARKRRERINERLRILQHLVPNGTKVHISTMLEEAVQYVKFLQLQIKLLSSDDLW 305
Query: 178 IVGDDHYNKLSLG 190
+ YN + +G
Sbjct: 306 MYAPIAYNGMDIG 318
>gi|297788272|ref|XP_002862272.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297795123|ref|XP_002865446.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297307602|gb|EFH38530.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297311281|gb|EFH41705.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 224
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 66/97 (68%)
Query: 94 AMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASM 153
A+ V ++++ + N I+ DPQS+ AR RRE+I+++++ LQ LVP GTK+D ++M
Sbjct: 118 ALGLVSNTSKSLKRKAKSNKGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKVDISTM 177
Query: 154 LDEAIRYVKFLKRQIRLLQSNQCNIVGDDHYNKLSLG 190
L++A+ YVKFL+ QI+LL S+ + +N L++G
Sbjct: 178 LEDAVHYVKFLQLQIKLLSSDDLWMYALLAHNGLNMG 214
>gi|224067212|ref|XP_002302411.1| predicted protein [Populus trichocarpa]
gi|222844137|gb|EEE81684.1| predicted protein [Populus trichocarpa]
Length = 362
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 54/73 (73%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
DPQS+ AR RRE+I+E+++ILQ LVP GTK+D ++ML+EA+ YV FL+ QI+LL S+
Sbjct: 281 DPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVHYVNFLQLQIKLLSSDDLW 340
Query: 178 IVGDDHYNKLSLG 190
+ YN + +G
Sbjct: 341 MYAPLAYNGIDIG 353
>gi|414887375|tpg|DAA63389.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 472
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 55/72 (76%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
DPQS+ AR RRE+I+E++RILQ LVP GTK+D ++ML+EA +YVKFL+ QI+LL S+
Sbjct: 205 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAAQYVKFLQLQIKLLSSDDMW 264
Query: 178 IVGDDHYNKLSL 189
+ YN +++
Sbjct: 265 MYAPIAYNGINI 276
>gi|224069350|ref|XP_002302962.1| predicted protein [Populus trichocarpa]
gi|222844688|gb|EEE82235.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 59/73 (80%)
Query: 103 TTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVK 162
+ +KPK ++ + DPQS+AA++RRE+ISE++++LQ LVP G+K+D +ML++AI YVK
Sbjct: 221 SATKKPKPKSAGPAKDPQSIAAKNRRERISERLKMLQDLVPNGSKVDLVTMLEKAISYVK 280
Query: 163 FLKRQIRLLQSNQ 175
FL+ Q+++L +++
Sbjct: 281 FLQLQVKVLATDE 293
>gi|414590707|tpg|DAA41278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 286
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 55/73 (75%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
+PQS+ AR RRE+I+E++RILQ LVP GTK+D ++ML+EA +YVKFL+ QI+LL +
Sbjct: 203 EPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAAQYVKFLQLQIKLLSCDDTW 262
Query: 178 IVGDDHYNKLSLG 190
+ YN +++G
Sbjct: 263 MYAPIAYNGINIG 275
>gi|218192293|gb|EEC74720.1| hypothetical protein OsI_10445 [Oryza sativa Indica Group]
Length = 324
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 56/73 (76%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
DPQS+ AR RRE+I+E+++ILQ L+P GTK+D ++ML+EA+ YVKFL+ QI+LL S+
Sbjct: 241 DPQSLYARKRRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDMW 300
Query: 178 IVGDDHYNKLSLG 190
+ YN +++G
Sbjct: 301 MFAPIAYNGVNVG 313
>gi|222624408|gb|EEE58540.1| hypothetical protein OsJ_09836 [Oryza sativa Japonica Group]
Length = 324
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 56/73 (76%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
DPQS+ AR RRE+I+E+++ILQ L+P GTK+D ++ML+EA+ YVKFL+ QI+LL S+
Sbjct: 241 DPQSLYARKRRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDMW 300
Query: 178 IVGDDHYNKLSLG 190
+ YN +++G
Sbjct: 301 MFAPIAYNGVNVG 313
>gi|108706746|gb|ABF94541.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 324
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 56/73 (76%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
DPQS+ AR RRE+I+E+++ILQ L+P GTK+D ++ML+EA+ YVKFL+ QI+LL S+
Sbjct: 241 DPQSLYARKRRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDMW 300
Query: 178 IVGDDHYNKLSLG 190
+ YN +++G
Sbjct: 301 MFAPIAYNGVNVG 313
>gi|357120420|ref|XP_003561925.1| PREDICTED: uncharacterized protein LOC100831403 [Brachypodium
distachyon]
Length = 337
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 55/73 (75%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
DPQS+ AR RREKI+E++++LQ LVP GTK+D ++ML+EA+ Y+KF++ QI+LL S+
Sbjct: 255 DPQSLYARKRREKINERLKVLQNLVPNGTKVDISTMLEEAVHYIKFMQLQIKLLSSDDMW 314
Query: 178 IVGDDHYNKLSLG 190
+ YN ++G
Sbjct: 315 MFAPIAYNGFNVG 327
>gi|22327541|ref|NP_680385.1| transcription factor bHLH139 [Arabidopsis thaliana]
gi|122213858|sp|Q3E7L7.1|BH139_ARATH RecName: Full=Transcription factor bHLH139; AltName: Full=Basic
helix-loop-helix protein 139; Short=AtbHLH139;
Short=bHLH 139; AltName: Full=Transcription factor EN
116; AltName: Full=bHLH transcription factor bHLH139
gi|332007536|gb|AED94919.1| transcription factor bHLH139 [Arabidopsis thaliana]
Length = 223
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 65/97 (67%)
Query: 94 AMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASM 153
A+ V ++++ + N I+ DPQS+ AR RRE+I+++++ LQ LVP GTK+D ++M
Sbjct: 117 ALGLVSNTSKSLKRKAKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKVDISTM 176
Query: 154 LDEAIRYVKFLKRQIRLLQSNQCNIVGDDHYNKLSLG 190
L++A+ YVKFL+ QI+LL S + +N L++G
Sbjct: 177 LEDAVHYVKFLQLQIKLLSSEDLWMYAPLAHNGLNMG 213
>gi|302781847|ref|XP_002972697.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
gi|300159298|gb|EFJ25918.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
Length = 442
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 64/96 (66%), Gaps = 11/96 (11%)
Query: 107 KPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKR 166
KP+ R ++DPQS+AARHRRE+IS++++ILQ LVP TK+D +ML++AI YVKFL+
Sbjct: 357 KPRARQGS-ANDPQSIAARHRRERISDRLKILQELVPNSTKVDLVTMLEKAINYVKFLQL 415
Query: 167 QIRLLQSNQCNIVGDDHYNKLSLGATTNTTIATTTA 202
Q+++L S DD++ GAT + TA
Sbjct: 416 QVKVLTS-------DDYWPS---GATWQNSSKADTA 441
>gi|125540854|gb|EAY87249.1| hypothetical protein OsI_08651 [Oryza sativa Indica Group]
Length = 299
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 52/60 (86%)
Query: 116 SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
+ DPQS+AA++RRE+ISE++RILQ LVP GTK+D +ML++AI YVKFL+ Q+++L +++
Sbjct: 204 TKDPQSLAAKNRRERISERLRILQELVPNGTKVDLVTMLEKAISYVKFLQLQVKVLATDE 263
>gi|41052641|dbj|BAD07489.1| bHLH protein-like [Oryza sativa Japonica Group]
gi|41052857|dbj|BAD07771.1| bHLH protein-like [Oryza sativa Japonica Group]
Length = 298
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 52/60 (86%)
Query: 116 SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
+ DPQS+AA++RRE+ISE++RILQ LVP GTK+D +ML++AI YVKFL+ Q+++L +++
Sbjct: 204 TKDPQSLAAKNRRERISERLRILQELVPNGTKVDLVTMLEKAISYVKFLQLQVKVLATDE 263
>gi|125583427|gb|EAZ24358.1| hypothetical protein OsJ_08110 [Oryza sativa Japonica Group]
Length = 282
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 52/60 (86%)
Query: 116 SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
+ DPQS+AA++RRE+ISE++RILQ LVP GTK+D +ML++AI YVKFL+ Q+++L +++
Sbjct: 188 TKDPQSLAAKNRRERISERLRILQELVPNGTKVDLVTMLEKAISYVKFLQLQVKVLATDE 247
>gi|242069235|ref|XP_002449894.1| hypothetical protein SORBIDRAFT_05g025230 [Sorghum bicolor]
gi|241935737|gb|EES08882.1| hypothetical protein SORBIDRAFT_05g025230 [Sorghum bicolor]
Length = 242
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 57/80 (71%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
D QS+ A+ RRE+I+E++R LQ+L+P GTK+D ++ML+EA++YVKFL+ QI+LL S
Sbjct: 160 DLQSLYAKRRRERINERLRTLQQLIPNGTKVDMSTMLEEAVQYVKFLQLQIKLLSSEDTW 219
Query: 178 IVGDDHYNKLSLGATTNTTI 197
+ YN +S+ + N +
Sbjct: 220 MYAPLAYNHMSMDVSQNAAV 239
>gi|115448229|ref|NP_001047894.1| Os02g0710300 [Oryza sativa Japonica Group]
gi|113537425|dbj|BAF09808.1| Os02g0710300 [Oryza sativa Japonica Group]
gi|215766533|dbj|BAG98841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 300
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 52/60 (86%)
Query: 116 SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
+ DPQS+AA++RRE+ISE++RILQ LVP GTK+D +ML++AI YVKFL+ Q+++L +++
Sbjct: 206 TKDPQSLAAKNRRERISERLRILQELVPNGTKVDLVTMLEKAISYVKFLQLQVKVLATDE 265
>gi|356537912|ref|XP_003537450.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 339
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 55/69 (79%)
Query: 107 KPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKR 166
K + N S DPQSVAA++RRE+ISE+++ILQ LVP G+K+D +ML++AI YVKFL+
Sbjct: 237 KTTKHNSSPSKDPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQL 296
Query: 167 QIRLLQSNQ 175
Q+++L +++
Sbjct: 297 QVKVLATDE 305
>gi|413920361|gb|AFW60293.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 241
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 52/63 (82%)
Query: 114 RISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
R S D QS+ A+ RRE+I+EK+R LQ+L+P GTK+D ++ML+EA++YVKFL+ QI+LL +
Sbjct: 172 RSSKDSQSLYAKRRRERINEKLRTLQQLIPNGTKVDMSTMLEEAVQYVKFLQLQIKLLLA 231
Query: 174 NQC 176
+C
Sbjct: 232 CKC 234
>gi|168038260|ref|XP_001771619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677058|gb|EDQ63533.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 569
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 94 AMQPVDIDPTTIRKPKRRNIRIS-DDPQSVAARHRREKISEKIRILQRLVPGGTKMDTAS 152
AM + + P + R R S DPQSV ARHRREKI+E+++ LQRLVP G ++D +
Sbjct: 454 AMDIIAVGPALNTNGRPRAKRGSATDPQSVYARHRREKINERLKTLQRLVPNGEQVDIVT 513
Query: 153 MLDEAIRYVKFLKRQIRLLQSNQCNIVGDDH-YNKLSL 189
ML+EAI +VKFL+ Q+ LL+S+ + D YN + +
Sbjct: 514 MLEEAIHFVKFLEFQLELLRSDDRWMFADPFIYNGMDI 551
>gi|255583421|ref|XP_002532470.1| DNA binding protein, putative [Ricinus communis]
gi|223527828|gb|EEF29926.1| DNA binding protein, putative [Ricinus communis]
Length = 327
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 59/82 (71%)
Query: 94 AMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASM 153
+ Q V + K ++ S DPQS+AA++RRE+ISE+++ILQ LVP G+K+D +M
Sbjct: 210 STQAVKKQCNSATKKQKPKTSPSKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTM 269
Query: 154 LDEAIRYVKFLKRQIRLLQSNQ 175
L++AI YVKFL+ Q+++L +++
Sbjct: 270 LEKAISYVKFLQLQVKVLATDE 291
>gi|356569373|ref|XP_003552876.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 339
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 52/60 (86%)
Query: 116 SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
S DPQSVAA++RRE+ISE+++ILQ LVP G+K+D +ML++AI YVKFL+ Q+++L +++
Sbjct: 246 SKDPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDE 305
>gi|140084368|gb|ABO84934.1| Rhd6-like 5 [Physcomitrella patens]
Length = 67
Score = 80.9 bits (198), Expect = 4e-13, Method: Composition-based stats.
Identities = 37/60 (61%), Positives = 49/60 (81%)
Query: 116 SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
+ DPQSV ARHRREKI+E+++ LQ LVP G K+D +MLDEAI YVKFL+ Q+ LL+S++
Sbjct: 3 ATDPQSVYARHRREKINERLKSLQNLVPNGAKVDIVTMLDEAIHYVKFLQNQVELLKSDE 62
>gi|102139852|gb|ABF70010.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 302
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 52/66 (78%)
Query: 110 RRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIR 169
R N + DPQS+ A+ RRE+I+ ++R LQ LVP GTK+D ++ML+EA+RYVKFL+ QI+
Sbjct: 205 RSNRWPATDPQSLYAKQRRERINARLRTLQNLVPNGTKVDISTMLEEAVRYVKFLQLQIK 264
Query: 170 LLQSNQ 175
LL S++
Sbjct: 265 LLSSDE 270
>gi|356509769|ref|XP_003523618.1| PREDICTED: uncharacterized protein LOC100779202 [Glycine max]
Length = 332
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 53/72 (73%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
DPQS+ AR RRE+I +++RILQ LVP GTK+D ++ML+EA++YVKFL+ Q +LL S+
Sbjct: 249 DPQSLYARKRRERIDDRLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQNKLLSSDDLW 308
Query: 178 IVGDDHYNKLSL 189
+ YN L L
Sbjct: 309 MYAPIAYNGLDL 320
>gi|140084359|gb|ABO84933.1| Rhd6-like 4 [Physcomitrella patens]
Length = 67
Score = 80.9 bits (198), Expect = 5e-13, Method: Composition-based stats.
Identities = 36/60 (60%), Positives = 49/60 (81%)
Query: 116 SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
+ DPQSV AR RREKI+E++R LQ L+P G K+D +MLDEA+ YV+FLKRQ+ LL+S++
Sbjct: 3 ATDPQSVHARARREKIAERLRKLQHLIPNGGKVDIVTMLDEAVHYVQFLKRQVTLLKSDE 62
>gi|140084376|gb|ABO84935.1| Rhd6-like 6 [Physcomitrella patens]
Length = 67
Score = 80.5 bits (197), Expect = 5e-13, Method: Composition-based stats.
Identities = 37/60 (61%), Positives = 49/60 (81%)
Query: 116 SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
+ DPQSV ARHRREKI+E+++ LQ LVP G K+D +MLDEAI YVKFL+ Q+ LL+S++
Sbjct: 3 ATDPQSVYARHRREKINERLKNLQNLVPNGAKVDIVTMLDEAIHYVKFLQTQVELLKSDE 62
>gi|449445206|ref|XP_004140364.1| PREDICTED: putative transcription factor bHLH086-like [Cucumis
sativus]
Length = 284
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 56/70 (80%), Gaps = 3/70 (4%)
Query: 106 RKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
+KPK + DPQS+AA++RRE+ISE+++ILQ LVP G+K+D +ML++AI YVKFL+
Sbjct: 181 QKPKSATAK---DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQ 237
Query: 166 RQIRLLQSNQ 175
Q+++L +++
Sbjct: 238 LQVKILATDE 247
>gi|302759440|ref|XP_002963143.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
gi|300170004|gb|EFJ36606.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
Length = 302
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
DPQSV ARHRRE+I+E+++ LQ LVP G K+D +ML+EAI YVKFL+ Q+ +L S++
Sbjct: 220 DPQSVYARHRRERINERLKTLQHLVPNGAKVDIVTMLEEAIHYVKFLQLQVNMLSSDEYW 279
Query: 178 IVGDDHYN 185
YN
Sbjct: 280 TYAPTTYN 287
>gi|15240346|ref|NP_198596.1| putative transcription factor bHLH086 [Arabidopsis thaliana]
gi|218563533|sp|Q9FJ00.2|BH086_ARATH RecName: Full=Putative transcription factor bHLH086; AltName:
Full=Basic helix-loop-helix protein 86; Short=AtbHLH86;
Short=bHLH 86; AltName: Full=Transcription factor EN
113; AltName: Full=bHLH transcription factor bHLH086
gi|332006851|gb|AED94234.1| putative transcription factor bHLH086 [Arabidopsis thaliana]
Length = 307
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 55/76 (72%), Gaps = 8/76 (10%)
Query: 100 IDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIR 159
I P PK DPQS+AA++RRE+ISE++++LQ LVP GTK+D +ML++AI
Sbjct: 200 IKPKATTSPK--------DPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKAIG 251
Query: 160 YVKFLKRQIRLLQSNQ 175
YVKFL+ Q+++L +++
Sbjct: 252 YVKFLQVQVKVLAADE 267
>gi|140084346|gb|ABO84932.1| Rhd6-like 3 [Physcomitrella patens]
Length = 67
Score = 80.5 bits (197), Expect = 6e-13, Method: Composition-based stats.
Identities = 36/60 (60%), Positives = 49/60 (81%)
Query: 116 SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
+ DPQSV ARHRREKI+E+++ LQ LVP G K+D +MLDEAI YV+FL+ Q+ LL+S++
Sbjct: 3 ATDPQSVYARHRREKINERLKTLQHLVPNGAKVDIVTMLDEAIHYVQFLQLQVTLLKSDE 62
>gi|242066232|ref|XP_002454405.1| hypothetical protein SORBIDRAFT_04g030230 [Sorghum bicolor]
gi|241934236|gb|EES07381.1| hypothetical protein SORBIDRAFT_04g030230 [Sorghum bicolor]
Length = 306
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 54/69 (78%)
Query: 107 KPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKR 166
K K + + DPQS+AA++RRE+ISE++R LQ LVP GTK+D +ML++AI YVKFL+
Sbjct: 205 KAKSPSTTPTKDPQSLAAKNRRERISERLRTLQELVPNGTKVDLVTMLEKAISYVKFLQL 264
Query: 167 QIRLLQSNQ 175
Q+++L +++
Sbjct: 265 QVKVLATDE 273
>gi|413947161|gb|AFW79810.1| hypothetical protein ZEAMMB73_605816 [Zea mays]
Length = 325
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 50/58 (86%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
DPQSVAA+ RREKI+EK+++LQ LVP GTK+D +ML++AI YVKFL+ Q+++L +++
Sbjct: 237 DPQSVAAKVRREKIAEKLKVLQDLVPNGTKVDLVTMLEKAITYVKFLQLQVKVLAADE 294
>gi|15219658|ref|NP_176820.1| transcription factor bHLH83 [Arabidopsis thaliana]
gi|75308842|sp|Q9C707.1|BH083_ARATH RecName: Full=Transcription factor bHLH83; AltName: Full=Basic
helix-loop-helix protein 83; Short=AtbHLH83; Short=bHLH
83; AltName: Full=Transcription factor EN 112; AltName:
Full=bHLH transcription factor bHLH083
gi|12322259|gb|AAG51154.1|AC074025_4 unknown protein [Arabidopsis thaliana]
gi|22135862|gb|AAM91513.1| unknown protein [Arabidopsis thaliana]
gi|30023790|gb|AAP13428.1| At1g66470 [Arabidopsis thaliana]
gi|332196391|gb|AEE34512.1| transcription factor bHLH83 [Arabidopsis thaliana]
Length = 298
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 51/58 (87%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
DPQS+AA++RRE+ISE+++ILQ LVP GTK+D +ML++AI YVKFL+ Q+++L +++
Sbjct: 204 DPQSLAAKNRRERISERLKILQELVPNGTKVDLVTMLEKAISYVKFLQVQVKVLATDE 261
>gi|297801316|ref|XP_002868542.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297314378|gb|EFH44801.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 300
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 51/58 (87%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
DPQS+AA++RRE+ISE++++LQ LVP GTK+D +ML++AI YVKFL+ Q+++L +++
Sbjct: 210 DPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFLQVQVKVLAADE 267
>gi|356551793|ref|XP_003544258.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 110
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 52/60 (86%)
Query: 116 SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
S DPQSVAA++RRE+ISE+++ILQ LVP G+K+D +ML++AI YVKFL+ Q+++L +++
Sbjct: 24 SQDPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAADE 83
>gi|297838323|ref|XP_002887043.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332884|gb|EFH63302.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 296
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 51/58 (87%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
DPQS+AA++RRE+ISE+++ILQ LVP GTK+D +ML++AI YVKFL+ Q+++L +++
Sbjct: 202 DPQSLAAKNRRERISERLKILQELVPNGTKVDLVTMLEKAISYVKFLQVQVKVLATDE 259
>gi|10177170|dbj|BAB10359.1| unnamed protein product [Arabidopsis thaliana]
Length = 239
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 55/76 (72%), Gaps = 8/76 (10%)
Query: 100 IDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIR 159
I P PK DPQS+AA++RRE+ISE++++LQ LVP GTK+D +ML++AI
Sbjct: 132 IKPKATTSPK--------DPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKAIG 183
Query: 160 YVKFLKRQIRLLQSNQ 175
YVKFL+ Q+++L +++
Sbjct: 184 YVKFLQVQVKVLAADE 199
>gi|242052339|ref|XP_002455315.1| hypothetical protein SORBIDRAFT_03g008290 [Sorghum bicolor]
gi|241927290|gb|EES00435.1| hypothetical protein SORBIDRAFT_03g008290 [Sorghum bicolor]
Length = 290
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 50/58 (86%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
DPQSVAA+ RREKI+EK+++LQ LVP GTK+D +ML++AI YVKFL+ Q+++L +++
Sbjct: 203 DPQSVAAKVRREKIAEKLKVLQDLVPNGTKVDLVTMLEKAITYVKFLQLQVKVLAADE 260
>gi|413938508|gb|AFW73059.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 54/69 (78%)
Query: 107 KPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKR 166
K K + + DPQS+AA++RRE+ISE++R LQ LVP GTK+D +ML++AI YVKFL+
Sbjct: 192 KAKLASTAPTKDPQSLAAKNRRERISERLRALQELVPNGTKVDLVTMLEKAISYVKFLQL 251
Query: 167 QIRLLQSNQ 175
Q+++L +++
Sbjct: 252 QVKVLATDE 260
>gi|225453146|ref|XP_002272414.1| PREDICTED: putative transcription factor bHLH086 [Vitis vinifera]
gi|296087164|emb|CBI33538.3| unnamed protein product [Vitis vinifera]
Length = 347
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 57/70 (81%), Gaps = 1/70 (1%)
Query: 106 RKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
RK K ++I DPQS+AA++RRE+ISE+++ILQ LVP G+K+D +ML++AI YVKFL+
Sbjct: 245 RKSKPKSIP-PKDPQSLAAKNRRERISERLKILQDLVPNGSKVDLVTMLEKAISYVKFLQ 303
Query: 166 RQIRLLQSNQ 175
Q+++L +++
Sbjct: 304 LQVKVLATDE 313
>gi|357437591|ref|XP_003589071.1| Transcription factor bHLH85 [Medicago truncatula]
gi|357437635|ref|XP_003589093.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478119|gb|AES59322.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478141|gb|AES59344.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 375
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 46/54 (85%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
DPQS+ AR RRE+I+E++R+LQ LVP GTK+D ++ML+EA+ YVKFL+ QI++
Sbjct: 283 DPQSLYARKRRERINERLRVLQNLVPNGTKVDISTMLEEAVNYVKFLQTQIKVC 336
>gi|302812823|ref|XP_002988098.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
gi|300144204|gb|EFJ10890.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
Length = 422
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 52/64 (81%), Gaps = 1/64 (1%)
Query: 107 KPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKR 166
KP+ R ++DPQS+AARHRRE+IS++++ILQ LVP TK+D +ML++AI YVKFL+
Sbjct: 357 KPRARQGS-ANDPQSIAARHRRERISDRLKILQELVPNSTKVDLVTMLEKAINYVKFLQL 415
Query: 167 QIRL 170
Q+++
Sbjct: 416 QVKV 419
>gi|302784756|ref|XP_002974150.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
gi|300158482|gb|EFJ25105.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
Length = 499
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Query: 107 KPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKR 166
KP+ + ++DPQS+AAR RRE+IS++++ILQ L+P G+K+D +ML++AI YVKFL+
Sbjct: 407 KPRAKQ-GCANDPQSIAARQRRERISDRLKILQELIPNGSKVDLVTMLEKAINYVKFLQL 465
Query: 167 QIRLLQSNQ 175
Q+++L +++
Sbjct: 466 QVKVLMNDE 474
>gi|302770807|ref|XP_002968822.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
gi|300163327|gb|EFJ29938.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
Length = 499
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Query: 107 KPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKR 166
KP+ + ++DPQS+AAR RRE+IS++++ILQ L+P G+K+D +ML++AI YVKFL+
Sbjct: 407 KPRAKQ-GCANDPQSIAARQRRERISDRLKILQELIPNGSKVDLVTMLEKAINYVKFLQL 465
Query: 167 QIRLLQSNQ 175
Q+++L +++
Sbjct: 466 QVKVLMNDE 474
>gi|6693022|gb|AAF24948.1|AC012375_11 T22C5.19 [Arabidopsis thaliana]
Length = 279
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 52/70 (74%)
Query: 103 TTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVK 162
T+++ R + DPQS+ AR RREKI+E+++ LQ LVP GTK+D ++ML+EA+ YVK
Sbjct: 161 TSVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVK 220
Query: 163 FLKRQIRLLQ 172
FL+ QI++ +
Sbjct: 221 FLQLQIKVCR 230
>gi|51970922|dbj|BAD44153.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
Length = 350
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 20/138 (14%)
Query: 104 TIRKPKRRNIRI------SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEA 157
T+ P + +I + DP S+A R RRE+I+E+++ LQ LVP G K D ASMLDE
Sbjct: 127 TVAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEI 186
Query: 158 IRYVKFLKRQIRLLQSNQCNIVGDDHYNKLSLGATTNTTIATTTASASAAGALDPILGHS 217
I YVKFL+ Q+++L ++ LG + + + A S A ++G S
Sbjct: 187 IDYVKFLQLQVKVLSMSR-------------LGGAASVSSQISEAGGSHGNASSAMVGGS 233
Query: 218 LPFHGNRNSSFYFNHHEV 235
GN N S H+V
Sbjct: 234 -QTAGNSNDSVTMTEHQV 250
>gi|15224109|ref|NP_180003.1| transcription factor bHLH66 [Arabidopsis thaliana]
gi|75315918|sp|Q9ZUG9.1|BH066_ARATH RecName: Full=Transcription factor bHLH66; AltName: Full=Basic
helix-loop-helix protein 66; Short=AtbHLH66; Short=bHLH
66; AltName: Full=Transcription factor EN 95; AltName:
Full=bHLH transcription factor bHLH066
gi|4115386|gb|AAD03387.1| unknown protein [Arabidopsis thaliana]
gi|51970882|dbj|BAD44133.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
gi|111074492|gb|ABH04619.1| At2g24260 [Arabidopsis thaliana]
gi|330252457|gb|AEC07551.1| transcription factor bHLH66 [Arabidopsis thaliana]
Length = 350
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 20/138 (14%)
Query: 104 TIRKPKRRNIRI------SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEA 157
T+ P + +I + DP S+A R RRE+I+E+++ LQ LVP G K D ASMLDE
Sbjct: 127 TVAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEI 186
Query: 158 IRYVKFLKRQIRLLQSNQCNIVGDDHYNKLSLGATTNTTIATTTASASAAGALDPILGHS 217
I YVKFL+ Q+++L ++ LG + + + A S A ++G S
Sbjct: 187 IDYVKFLQLQVKVLSMSR-------------LGGAASVSSQISEAGGSHGNASSAMVGGS 233
Query: 218 LPFHGNRNSSFYFNHHEV 235
GN N S H+V
Sbjct: 234 -QTAGNSNDSVTMTEHQV 250
>gi|140084384|gb|ABO84936.1| Rhd6-like 7 [Physcomitrella patens]
Length = 67
Score = 77.0 bits (188), Expect = 5e-12, Method: Composition-based stats.
Identities = 35/59 (59%), Positives = 49/59 (83%)
Query: 116 SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSN 174
+ DPQSV ARHRREKI+E+++ LQRLVP G ++D +ML+EAI +VKFL+ Q+ LL+S+
Sbjct: 3 ATDPQSVYARHRREKINERLKTLQRLVPNGEQVDIVTMLEEAIHFVKFLEFQLELLRSD 61
>gi|302795837|ref|XP_002979681.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
gi|300152441|gb|EFJ19083.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
Length = 335
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 55/79 (69%), Gaps = 4/79 (5%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
DPQS+ AR RRE+I+E++R LQ LVP G K+D +ML+EAI YVKFL Q++LL S++
Sbjct: 246 DPQSIYARQRRERINERLRALQGLVPNGAKVDIVTMLEEAINYVKFL--QLQLLSSDEYW 303
Query: 178 IVGDDHYN--KLSLGATTN 194
+ +YN +SLG N
Sbjct: 304 MYAPTNYNGMNISLGMHLN 322
>gi|334184231|ref|NP_001189527.1| transcription factor bHLH84 [Arabidopsis thaliana]
gi|330251239|gb|AEC06333.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 341
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 56/86 (65%), Gaps = 13/86 (15%)
Query: 118 DPQSVAAR-------------HRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFL 164
DPQS+ AR RRE+I+E++RILQ LVP GTK+D ++ML+EA++YVKFL
Sbjct: 246 DPQSLYARLKQLNKVHCMMVQKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFL 305
Query: 165 KRQIRLLQSNQCNIVGDDHYNKLSLG 190
+ QI+LL S+ + YN + +G
Sbjct: 306 QLQIKLLSSDDLWMYAPIAYNGMDIG 331
>gi|297825371|ref|XP_002880568.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326407|gb|EFH56827.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 353
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 71/138 (51%), Gaps = 15/138 (10%)
Query: 98 VDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEA 157
V + P + K + R + +D P S+A R RRE+I+E+++ LQ LVP G K D ASMLDE
Sbjct: 128 VAVPPQSRTKVRARRGQATD-PHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEI 186
Query: 158 IRYVKFLKRQIRLLQSNQCNIVGDDHYNKLSLGATTNTTIATTTASASAAGALDPILGHS 217
I YVKFL+ Q+++L ++ LG + + + A S A + G S
Sbjct: 187 IDYVKFLQLQVKVLSMSR-------------LGGAASVSSQLSEAGGSHGNASSAMAGGS 233
Query: 218 LPFHGNRNSSFYFNHHEV 235
GN N S H+V
Sbjct: 234 Q-TAGNSNDSITMTEHQV 250
>gi|168000336|ref|XP_001752872.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696035|gb|EDQ82376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 583
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 42/51 (82%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQI 168
DPQSV AR RREKI+E++R LQ L+P G K+D +MLDEA+ YV+FLKRQ+
Sbjct: 456 DPQSVHARARREKIAERLRKLQHLIPNGGKVDIVTMLDEAVHYVQFLKRQV 506
>gi|357150524|ref|XP_003575488.1| PREDICTED: transcription factor bHLH84-like [Brachypodium
distachyon]
Length = 178
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 51/62 (82%)
Query: 114 RISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
R + D QS A+ RR++I+E++RILQ+L+P GTK+D ++ML+EA++YVKFL QI+LL S
Sbjct: 100 RAAKDSQSHYAKKRRQRINERLRILQKLIPNGTKVDISTMLEEAVQYVKFLHLQIKLLSS 159
Query: 174 NQ 175
++
Sbjct: 160 DE 161
>gi|20127072|gb|AAM10955.1|AF488599_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 350
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 70/138 (50%), Gaps = 20/138 (14%)
Query: 104 TIRKPKRRNIRI------SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEA 157
T+ P + +I + DP S+A R RRE+I+E+++ LQ LVP G K D ASMLDE
Sbjct: 127 TVAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEI 186
Query: 158 IRYVKFLKRQIRLLQSNQCNIVGDDHYNKLSLGATTNTTIATTTASASAAGALDPILGHS 217
I YV+FL+ Q+++L ++ LG + + + A S A ++G S
Sbjct: 187 IDYVEFLQLQVKVLSMSR-------------LGGAASVSSQISEAGGSHGNASSAMVGGS 233
Query: 218 LPFHGNRNSSFYFNHHEV 235
GN N S H+V
Sbjct: 234 -QTAGNSNDSVTMTEHQV 250
>gi|77556222|gb|ABA99018.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125579480|gb|EAZ20626.1| hypothetical protein OsJ_36241 [Oryza sativa Japonica Group]
Length = 198
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 50/60 (83%)
Query: 116 SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
++ QS A++RR++I+E++RILQ L+P GTK+D ++ML+EAI+YVKFL QI+LL S++
Sbjct: 115 AESSQSYYAKNRRQRINERLRILQELIPNGTKVDISTMLEEAIQYVKFLHLQIKLLSSDE 174
>gi|414877869|tpg|DAA55000.1| TPA: putative clathrin heavy chain family protein [Zea mays]
Length = 898
Score = 75.9 bits (185), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/54 (59%), Positives = 47/54 (87%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
+PQS+ AR RRE+I+E++++LQ LVP GTK+D ++ML+EA+ YVKFL+ QIRL+
Sbjct: 222 EPQSIYARKRRERINERLKVLQSLVPNGTKVDMSTMLEEAVHYVKFLQLQIRLI 275
>gi|224077304|ref|XP_002305203.1| predicted protein [Populus trichocarpa]
gi|222848167|gb|EEE85714.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
Query: 106 RKPKRRNIRI-SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFL 164
+KPK ++ + D QS+AA++RRE+ISE++++LQ LVP G+K+D +ML++AI YVKFL
Sbjct: 227 KKPKPKSAAGPAKDLQSIAAKNRRERISERLKVLQDLVPNGSKVDLVTMLEKAISYVKFL 286
Query: 165 KRQIRLLQSNQ 175
+ Q+++L +++
Sbjct: 287 QLQVKVLATDE 297
>gi|224129878|ref|XP_002320693.1| predicted protein [Populus trichocarpa]
gi|222861466|gb|EEE99008.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 46/53 (86%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRL 170
DPQS+ AR RRE+I+E+++ILQ +VP GTK+D ++ML+EA+ YVKFL+ QI++
Sbjct: 279 DPQSLYARKRRERINERLKILQHIVPNGTKVDISTMLEEAVHYVKFLQLQIKV 331
>gi|302805717|ref|XP_002984609.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
gi|300147591|gb|EFJ14254.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
Length = 298
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 51/63 (80%), Gaps = 1/63 (1%)
Query: 107 KPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKR 166
KP+ R ++DPQS+AAR RRE+IS++++ILQ LVP G+K+D +ML++AI YVKF++
Sbjct: 232 KPRSRQ-GTANDPQSIAARQRRERISQRLKILQDLVPNGSKVDLVTMLEKAINYVKFMQL 290
Query: 167 QIR 169
Q++
Sbjct: 291 QLQ 293
>gi|357492173|ref|XP_003616375.1| Transcription factor bHLH83 [Medicago truncatula]
gi|355517710|gb|AES99333.1| Transcription factor bHLH83 [Medicago truncatula]
Length = 325
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 60/97 (61%), Gaps = 16/97 (16%)
Query: 95 MQPVDIDP--TTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTK----- 147
MQP + T K ++ S DPQSVAA++RRE+ISE+++ILQ LVP G+K
Sbjct: 202 MQPTNAKKPCTAASKKEKHKSNPSKDPQSVAAKNRRERISERLKILQELVPNGSKVDFQI 261
Query: 148 ---------MDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
+D +ML++AI YVKFL+ Q+++L +++
Sbjct: 262 SPQSYVAFFVDLVTMLEKAISYVKFLQLQVKVLAADE 298
>gi|30688869|ref|NP_194827.2| transcription factor bHLH69 [Arabidopsis thaliana]
gi|218563529|sp|Q8S3D5.2|BH069_ARATH RecName: Full=Transcription factor bHLH69; AltName: Full=Basic
helix-loop-helix protein 69; Short=AtbHLH69; Short=bHLH
69; AltName: Full=Transcription factor EN 94; AltName:
Full=bHLH transcription factor bHLH069
gi|225898837|dbj|BAH30549.1| hypothetical protein [Arabidopsis thaliana]
gi|332660437|gb|AEE85837.1| transcription factor bHLH69 [Arabidopsis thaliana]
Length = 310
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 107 KPKRRNIR-ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
KPK R R + DP S+A R RRE+I+E+++ LQ LVP G K D ASMLDE I YVKFL+
Sbjct: 127 KPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQ 186
Query: 166 RQIRLL 171
Q+++L
Sbjct: 187 LQVKVL 192
>gi|20127075|gb|AAM10956.1|AF488601_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 107 KPKRRNIR-ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
KPK R R + DP S+A R RRE+I+E+++ LQ LVP G K D ASMLDE I YVKFL+
Sbjct: 127 KPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQ 186
Query: 166 RQIRLL 171
Q+++L
Sbjct: 187 LQVKVL 192
>gi|357127136|ref|XP_003565241.1| PREDICTED: transcription factor bHLH113-like [Brachypodium
distachyon]
Length = 257
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 47/57 (82%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSN 174
DPQS A+ RRE+ISE++++LQ LVP GTK+D +ML++AI YVKFL+ Q+++L ++
Sbjct: 171 DPQSAVAKVRRERISERLKVLQDLVPNGTKVDMVTMLEKAITYVKFLQLQVKVLATD 227
>gi|2980768|emb|CAA18195.1| putative protein [Arabidopsis thaliana]
gi|7270000|emb|CAB79816.1| putative protein [Arabidopsis thaliana]
Length = 367
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 107 KPKRRNIR-ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
KPK R R + DP S+A R RRE+I+E+++ LQ LVP G K D ASMLDE I YVKFL+
Sbjct: 184 KPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQ 243
Query: 166 RQIRLL 171
Q+++L
Sbjct: 244 LQVKVL 249
>gi|302793827|ref|XP_002978678.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
gi|300153487|gb|EFJ20125.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
Length = 298
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 51/63 (80%), Gaps = 1/63 (1%)
Query: 107 KPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKR 166
KP+ R ++DPQS+AAR RRE+IS++++ILQ LVP G+K+D +ML++AI YVKF++
Sbjct: 232 KPRSRQ-GTANDPQSIAARQRRERISQRLKILQDLVPNGSKVDLVTMLEKAINYVKFMQL 290
Query: 167 QIR 169
Q++
Sbjct: 291 QLQ 293
>gi|297798868|ref|XP_002867318.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313154|gb|EFH43577.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 107 KPKRRNIR-ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
KPK R R + DP S+A R RRE+I+E+++ LQ LVP G K D ASMLDE I YVKFL+
Sbjct: 125 KPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQ 184
Query: 166 RQIRLL 171
Q+++L
Sbjct: 185 LQVKVL 190
>gi|125605938|gb|EAZ44974.1| hypothetical protein OsJ_29617 [Oryza sativa Japonica Group]
Length = 287
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/61 (72%), Positives = 53/61 (86%)
Query: 84 AMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVP 143
AM+EM++ IAA+QPV+IDP +R PKRRN+RIS DPQSVAAR RRE+ISE+IRILQR P
Sbjct: 116 AMREMIFHIAALQPVEIDPEAVRPPKRRNVRISKDPQSVAARLRRERISERIRILQRPRP 175
Query: 144 G 144
G
Sbjct: 176 G 176
>gi|140084327|gb|ABO84930.1| Rhd6-like 1 [Physcomitrella patens]
Length = 762
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 54/68 (79%), Gaps = 1/68 (1%)
Query: 107 KPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKR 166
KP+ R ++DPQS+AAR RRE+ISE++++LQ L+P G K+D +ML++AI YV+ L+
Sbjct: 638 KPRARQGS-ANDPQSIAARVRRERISERLKVLQALIPNGDKVDMVTMLEKAISYVQCLEF 696
Query: 167 QIRLLQSN 174
QI++L+++
Sbjct: 697 QIKMLKND 704
>gi|93280154|gb|ABF06705.1| Joka8 [Nicotiana plumbaginifolia]
Length = 360
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 50/73 (68%), Gaps = 4/73 (5%)
Query: 103 TTIRKPKRRNIRI----SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAI 158
T +PK++ +R + DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE I
Sbjct: 237 TPAAQPKQQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEII 296
Query: 159 RYVKFLKRQIRLL 171
YVKFL+ Q+++L
Sbjct: 297 DYVKFLQLQVKVL 309
>gi|115434094|ref|NP_001041805.1| Os01g0111500 [Oryza sativa Japonica Group]
gi|113531336|dbj|BAF03719.1| Os01g0111500 [Oryza sativa Japonica Group]
gi|215766224|dbj|BAG98452.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388931|gb|ADX60270.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 295
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 49/59 (83%)
Query: 117 DDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
+ PQS AA+ RRE+ISE++++LQ LVP GTK+D +ML++AI YVKFL+ Q+++L +++
Sbjct: 207 EQPQSAAAKVRRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQLQVKVLATDE 265
>gi|13486646|dbj|BAB39884.1| unknown protein [Oryza sativa Japonica Group]
Length = 294
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 49/59 (83%)
Query: 117 DDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
+ PQS AA+ RRE+ISE++++LQ LVP GTK+D +ML++AI YVKFL+ Q+++L +++
Sbjct: 206 EQPQSAAAKVRRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQLQVKVLATDE 264
>gi|168027850|ref|XP_001766442.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682351|gb|EDQ68770.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 879
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 54/68 (79%), Gaps = 1/68 (1%)
Query: 107 KPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKR 166
KP+ R ++DPQS+AAR RRE+ISE++++LQ L+P G K+D +ML++AI YV+ L+
Sbjct: 753 KPRARQGS-ANDPQSIAARVRRERISERLKVLQALIPNGDKVDMVTMLEKAITYVQCLEL 811
Query: 167 QIRLLQSN 174
QI++L+++
Sbjct: 812 QIKMLKND 819
>gi|218187376|gb|EEC69803.1| hypothetical protein OsI_00101 [Oryza sativa Indica Group]
Length = 288
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 49/59 (83%)
Query: 117 DDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
+ PQS AA+ RRE+ISE++++LQ LVP GTK+D +ML++AI YVKFL+ Q+++L +++
Sbjct: 200 EQPQSAAAKVRRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQLQVKVLATDE 258
>gi|255550301|ref|XP_002516201.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
gi|223544687|gb|EEF46203.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
Length = 592
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Query: 107 KPKRRNIR-ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
KP+ R R + DP S+A R RREKI+E+++ LQ LVP +K+D ASMLDE I YVKFL+
Sbjct: 348 KPRVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSSKVDKASMLDEIIEYVKFLQ 407
Query: 166 RQIRLLQSNQCNIVG 180
Q+++L ++ G
Sbjct: 408 LQVKVLSMSRLGATG 422
>gi|15242922|ref|NP_200609.1| transcription factor bHLH82 [Arabidopsis thaliana]
gi|75311535|sp|Q9LSQ3.1|BH082_ARATH RecName: Full=Transcription factor bHLH82; AltName: Full=Basic
helix-loop-helix protein 82; Short=AtbHLH82; Short=bHLH
82; AltName: Full=Transcription factor EN 96; AltName:
Full=bHLH transcription factor bHLH082
gi|8885595|dbj|BAA97525.1| unnamed protein product [Arabidopsis thaliana]
gi|332009604|gb|AED96987.1| transcription factor bHLH82 [Arabidopsis thaliana]
Length = 297
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 70/132 (53%), Gaps = 14/132 (10%)
Query: 102 PTTIRKPKRRNIRI-SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRY 160
P +KP+ R R + DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE I Y
Sbjct: 91 PVVRQKPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEY 150
Query: 161 VKFLKRQIRLLQSNQCNIVGDDHYNKLSLGATTNTTIATTTASASAAGALDPILGHSLPF 220
V+FL+ Q+++L ++ G S+G N SA A G L+ +
Sbjct: 151 VRFLQLQVKVLSMSRLGGAG-------SVGPRLNGL------SAEAGGRLNALTAPCNGL 197
Query: 221 HGNRNSSFYFNH 232
+GN N++ N
Sbjct: 198 NGNGNATGSSNE 209
>gi|168039365|ref|XP_001772168.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676499|gb|EDQ62981.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 945
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 54/68 (79%), Gaps = 1/68 (1%)
Query: 107 KPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKR 166
KP+ R ++DPQS+AAR RRE+ISE++++LQ L+P G K+D +ML++AI YV+ L+
Sbjct: 821 KPRARQGS-ANDPQSIAARVRRERISERLKVLQALIPNGDKVDMVTMLEKAISYVQCLEF 879
Query: 167 QIRLLQSN 174
QI++L+++
Sbjct: 880 QIKMLKND 887
>gi|222617607|gb|EEE53739.1| hypothetical protein OsJ_00092 [Oryza sativa Japonica Group]
Length = 310
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 49/59 (83%)
Query: 117 DDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
+ PQS AA+ RRE+ISE++++LQ LVP GTK+D +ML++AI YVKFL+ Q+++L +++
Sbjct: 222 EQPQSAAAKVRRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQLQVKVLATDE 280
>gi|225444197|ref|XP_002270265.1| PREDICTED: transcription factor bHLH52-like [Vitis vinifera]
Length = 283
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 5/83 (6%)
Query: 104 TIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKF 163
++ ++ R S QS+AAR RR KI+EK + L +L+PGG KM+TA M A +YVK+
Sbjct: 145 SVESSGKKGCRESLSAQSIAARQRRRKITEKTQELGKLIPGGNKMNTAEMFQAAFKYVKY 204
Query: 164 LKRQIRLLQSNQCNIVGDDHYNK 186
L+ Q+ +LQ ++G YN+
Sbjct: 205 LQAQVAILQ-----LMGSLQYNE 222
>gi|302809450|ref|XP_002986418.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
gi|300145954|gb|EFJ12627.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
Length = 355
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 24/169 (14%)
Query: 36 NTQILPSSSRHIIQPSSSTLL-FGDHNNNNNNNNIIDQEEDEEPEEELGAMKEMMYRIAA 94
NT + S S H + ++ + GD +++ N++ + DEE ++ GA +M
Sbjct: 39 NTGQVSSWSHHFVPGNALSFAKLGDGGASSDPNSVKKRYRDEELQQMYGAAGQMQIDQQQ 98
Query: 95 MQ----------PVDIDPTTIR------------KPKRRNIRI-SDDPQSVAARHRREKI 131
P+ D +P+ R R + DP S+A R RREKI
Sbjct: 99 KHQQDQQQRSQAPLAYDSNAPVAPVNPPPAGISARPRVRARRGQATDPHSIAERLRREKI 158
Query: 132 SEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNIVG 180
+E+++ LQ LVP K D ASMLDE I YVKFL+ Q+++L ++ G
Sbjct: 159 AERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAG 207
>gi|125554388|gb|EAY99993.1| hypothetical protein OsI_21996 [Oryza sativa Indica Group]
Length = 477
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 107 KPKRRNIR-ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
KP+ R R + DP S+A R RREKISE+++ LQ LVP K D ASMLDE I YVKFL+
Sbjct: 312 KPRTRARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKADKASMLDEIIDYVKFLQ 371
Query: 166 RQIRLLQSNQCNIVG 180
Q+++L ++ G
Sbjct: 372 LQVKVLSMSRLGAPG 386
>gi|227016417|gb|ACP18670.1| barren stalk1-like protein [Leymus cinereus x Leymus triticoides]
Length = 99
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 42/49 (85%)
Query: 114 RISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVK 162
++S DPQSVAAR RR +IS++ R+L+ LVPGG+KMDT SML++AI YVK
Sbjct: 51 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVK 99
>gi|356536103|ref|XP_003536579.1| PREDICTED: transcription factor bHLH84-like [Glycine max]
Length = 352
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 67/99 (67%), Gaps = 3/99 (3%)
Query: 101 DPTTIR---KPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEA 157
D T+++ K N + DPQSV AR RRE+I+E+++ILQ LVP GTK+D ++ML+EA
Sbjct: 249 DSTSLKLKGKKSTANRGSATDPQSVYARRRRERINERLKILQNLVPNGTKVDISTMLEEA 308
Query: 158 IRYVKFLKRQIRLLQSNQCNIVGDDHYNKLSLGATTNTT 196
++YVKFL+ QI+LL S+ + YN +++G N T
Sbjct: 309 VQYVKFLQLQIKLLSSDDLWMYSPIAYNGMNIGLDLNIT 347
>gi|125536776|gb|EAY83264.1| hypothetical protein OsI_38473 [Oryza sativa Indica Group]
Length = 198
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 49/60 (81%)
Query: 116 SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
++ Q A++RR++I+E++RILQ L+P GTK+D ++ML+EAI+YVKFL QI+LL S++
Sbjct: 115 AESSQPYYAKNRRQRINERLRILQELIPNGTKVDISTMLEEAIQYVKFLHLQIKLLSSDE 174
>gi|357124947|ref|XP_003564158.1| PREDICTED: uncharacterized protein LOC100841109 [Brachypodium
distachyon]
Length = 482
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 107 KPKRRNIR-ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
KP+ R R + DP S+A R RREKISE+++ LQ LVP K D +SMLDE I YVKFL+
Sbjct: 318 KPRSRARRGQATDPHSIAERLRREKISERMKNLQELVPNSNKADKSSMLDEIIDYVKFLQ 377
Query: 166 RQIRLL 171
Q+++L
Sbjct: 378 LQVKVL 383
>gi|194396125|gb|ACF60480.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 478
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 107 KPKRRNIR-ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
KP+ R R + DP S+A R RREKISE+++ LQ LVP K D ASMLDE I YVKFL+
Sbjct: 313 KPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQ 372
Query: 166 RQIRLLQSNQCNIVG 180
Q+++L ++ G
Sbjct: 373 LQVKVLSMSRLGAPG 387
>gi|29424047|gb|AAO73566.1| bHLH transcription factor PTF1 [Oryza sativa]
Length = 478
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 107 KPKRRNIR-ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
KP+ R R + DP S+A R RREKISE+++ LQ LVP K D ASMLDE I YVKFL+
Sbjct: 313 KPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQ 372
Query: 166 RQIRLLQSNQCNIVG 180
Q+++L ++ G
Sbjct: 373 LQVKVLSMSRLGAPG 387
>gi|115466888|ref|NP_001057043.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|51090797|dbj|BAD35275.1| bHLH transcription factor PTF1 [Oryza sativa Japonica Group]
gi|113595083|dbj|BAF18957.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|125596339|gb|EAZ36119.1| hypothetical protein OsJ_20430 [Oryza sativa Japonica Group]
gi|215686762|dbj|BAG89612.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 107 KPKRRNIR-ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
KP+ R R + DP S+A R RREKISE+++ LQ LVP K D ASMLDE I YVKFL+
Sbjct: 313 KPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQ 372
Query: 166 RQIRLLQSNQCNIVG 180
Q+++L ++ G
Sbjct: 373 LQVKVLSMSRLGAPG 387
>gi|449493201|ref|XP_004159220.1| PREDICTED: uncharacterized protein LOC101232790 [Cucumis sativus]
Length = 312
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 43/58 (74%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQC 176
P+S AR RR+K+S+K R LQ+L+P KMD A+ML+EA +YVKFL+ Q+ LQS C
Sbjct: 180 PRSTFARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMPC 237
>gi|51090798|dbj|BAD35276.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
Length = 401
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 107 KPKRRNIR-ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
KP+ R R + DP S+A R RREKISE+++ LQ LVP K D ASMLDE I YVKFL+
Sbjct: 236 KPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQ 295
Query: 166 RQIRLLQSNQCNIVG 180
Q+++L ++ G
Sbjct: 296 LQVKVLSMSRLGAPG 310
>gi|357128639|ref|XP_003565978.1| PREDICTED: uncharacterized protein LOC100831424 [Brachypodium
distachyon]
Length = 299
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 45/58 (77%), Gaps = 2/58 (3%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGG--TKMDTASMLDEAIRYVKFLKRQIRLLQS 173
+PQ+VAAR RREK+SE++R L+RLVPGG KMDTASML +A Y+ FLK Q+ Q+
Sbjct: 181 EPQTVAARLRREKVSERLRALRRLVPGGGSGKMDTASMLHQAACYLSFLKAQLARFQA 238
>gi|326498007|dbj|BAJ94866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 481
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 107 KPKRRNIR-ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
KP+ R R + DP S+A R RREKISE+++ LQ LVP K D +SMLDE I YVKFL+
Sbjct: 317 KPRARARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKADKSSMLDEIIDYVKFLQ 376
Query: 166 RQIRLL 171
Q+++L
Sbjct: 377 LQVKVL 382
>gi|115345831|gb|ABI95371.1| PTF1 [Triticum aestivum]
Length = 480
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 107 KPKRRNIR-ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
KP+ R R + DP S+A R RREKISE+++ LQ LVP K D +SMLDE I YVKFL+
Sbjct: 316 KPRARARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKADKSSMLDEIIDYVKFLQ 375
Query: 166 RQIRLL 171
Q+++L
Sbjct: 376 LQVKVL 381
>gi|357480125|ref|XP_003610348.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511403|gb|AES92545.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 400
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%)
Query: 97 PVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDE 156
P P R+ R + DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE
Sbjct: 184 PASGAPAQPRQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDE 243
Query: 157 AIRYVKFLKRQIRLLQSNQCNIVG 180
I YVKFL+ Q+++L ++ G
Sbjct: 244 IIDYVKFLQVQVKVLSMSRLGGAG 267
>gi|359484248|ref|XP_002277344.2| PREDICTED: uncharacterized protein LOC100257707 [Vitis vinifera]
Length = 536
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 107 KPKRRNIRI-SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
KP+ R R + DP S+A R RREKI+E+++ LQ LVP K D ASMLDE I YVKFL+
Sbjct: 293 KPRVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIEYVKFLQ 352
Query: 166 RQIRLL 171
Q+++L
Sbjct: 353 LQVKVL 358
>gi|357480123|ref|XP_003610347.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511402|gb|AES92544.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 403
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%)
Query: 97 PVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDE 156
P P R+ R + DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE
Sbjct: 187 PASGAPAQPRQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDE 246
Query: 157 AIRYVKFLKRQIRLLQSNQCNIVG 180
I YVKFL+ Q+++L ++ G
Sbjct: 247 IIDYVKFLQVQVKVLSMSRLGGAG 270
>gi|242095026|ref|XP_002438003.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
gi|241916226|gb|EER89370.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
Length = 489
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 58/100 (58%), Gaps = 11/100 (11%)
Query: 107 KPKRRNIR-ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
KP+ R R + DP S+A R RREKIS++++ LQ LVP K D ASMLDE I YVKFL+
Sbjct: 317 KPRVRARRGQATDPHSIAERLRREKISDRMKSLQDLVPNSNKADKASMLDEIIDYVKFLQ 376
Query: 166 RQIRLLQSNQCNIVG----------DDHYNKLSLGATTNT 195
Q+++L ++ G + Y+ L A TNT
Sbjct: 377 LQVKVLSMSRLGAPGAVLPLLTESQTEGYHGQPLSAPTNT 416
>gi|140084334|gb|ABO84931.1| Rhd6-like 2 [Physcomitrella patens]
Length = 173
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 50/59 (84%)
Query: 116 SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSN 174
++DPQS+AAR RRE+ISE++++LQ L+P G K+D +ML++AI YV+ L+ QI++L+++
Sbjct: 55 ANDPQSIAARVRRERISERLKVLQALIPNGDKVDMVTMLEKAITYVQCLELQIKMLKND 113
>gi|224068580|ref|XP_002326150.1| predicted protein [Populus trichocarpa]
gi|222833343|gb|EEE71820.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
DP S+A R RREKI+E+++ LQ LVP K+D ASMLDE I YVKFL+ Q+++L ++
Sbjct: 249 DPHSIAERLRREKIAERMKNLQELVPNSNKVDKASMLDEIIEYVKFLQLQVKVLSMSRLG 308
Query: 178 IVG 180
G
Sbjct: 309 AAG 311
>gi|168029799|ref|XP_001767412.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681308|gb|EDQ67736.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 825
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 49/70 (70%)
Query: 109 KRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQI 168
+RR + DPQS+AAR RREK +++IRILQ LVP G ++DT ML + YV+FL+ ++
Sbjct: 675 QRRRHGTATDPQSIAARTRREKFTDRIRILQSLVPNGERLDTVHMLSQTFEYVRFLQHKV 734
Query: 169 RLLQSNQCNI 178
L +N+ +I
Sbjct: 735 WDLYNNKDSI 744
>gi|227345480|gb|ACP28172.1| roothairless1/slippery [Lotus japonicus]
Length = 386
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 107 KPKRRNIR-ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
KP+ R R + DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE I YVKFL+
Sbjct: 171 KPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 230
Query: 166 RQIRLL 171
Q+++L
Sbjct: 231 LQVKVL 236
>gi|52077404|dbj|BAD46515.1| bHLH protein-like [Oryza sativa Japonica Group]
gi|125597317|gb|EAZ37097.1| hypothetical protein OsJ_21438 [Oryza sativa Japonica Group]
Length = 294
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 44/55 (80%)
Query: 120 QSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSN 174
QS AA+ RRE+ISE++R LQ LVP G K+D +MLD AI YVKF++ Q+R+L+++
Sbjct: 200 QSSAAKSRRERISERLRALQELVPSGGKVDMVTMLDRAISYVKFMQMQLRVLETD 254
>gi|125555439|gb|EAZ01045.1| hypothetical protein OsI_23077 [Oryza sativa Indica Group]
Length = 294
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 44/55 (80%)
Query: 120 QSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSN 174
QS AA+ RRE+ISE++R LQ LVP G K+D +MLD AI YVKF++ Q+R+L+++
Sbjct: 200 QSSAAKSRRERISERLRALQELVPSGGKVDMVTMLDRAISYVKFMQMQLRVLETD 254
>gi|297796719|ref|XP_002866244.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312079|gb|EFH42503.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 102 PTTIRKPKRRNIRI-SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRY 160
P +KP+ R R + DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE I Y
Sbjct: 91 PVVRQKPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEY 150
Query: 161 VKFLKRQIRLLQSNQCNIVG 180
V+FL+ Q+++L ++ G
Sbjct: 151 VRFLQLQVKVLSMSRLGGAG 170
>gi|296089224|emb|CBI38996.3| unnamed protein product [Vitis vinifera]
Length = 264
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 54/94 (57%)
Query: 104 TIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKF 163
++ ++ R S QS+AAR RR KI+EK + L +L+PGG KM+TA M A +YVK+
Sbjct: 126 SVESSGKKGCRESLSAQSIAARQRRRKITEKTQELGKLIPGGNKMNTAEMFQAAFKYVKY 185
Query: 164 LKRQIRLLQSNQCNIVGDDHYNKLSLGATTNTTI 197
L+ Q+ +LQ V + + L AT + I
Sbjct: 186 LQAQVAILQLMGSLQVNSEAFYVEELQATASPMI 219
>gi|162460249|ref|NP_001105867.1| bHLH transcription factor PTF1 [Zea mays]
gi|93359745|gb|ABF13333.1| bHLH transcription factor PTF1 [Zea mays]
Length = 481
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 95 MQPVDIDPTTIRKPKRRNIR-ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASM 153
+QP + KP+ R R + DP S+A R RREKIS++++ LQ LVP K D ASM
Sbjct: 305 IQPNSVGNGVGVKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASM 364
Query: 154 LDEAIRYVKFLKRQIRLLQSNQCNIVG 180
LDE I YVKFL+ Q+++L ++ G
Sbjct: 365 LDEIIDYVKFLQLQVKVLSMSRLGAPG 391
>gi|297743632|emb|CBI36515.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 59/116 (50%)
Query: 56 LFGDHNNNNNNNNIIDQEEDEEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRI 115
L G +N N + + GA +M + A P R+ R
Sbjct: 51 LHGSGQASNQAQNFHHPQGGSMQAQNYGAPATVMNQTPATGSAGGAPAQPRQRVRARRGQ 110
Query: 116 SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
+ DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE I YVKFL+ Q+++L
Sbjct: 111 ATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 166
>gi|195616290|gb|ACG29975.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 481
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 95 MQPVDIDPTTIRKPKRRNIR-ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASM 153
+QP + KP+ R R + DP S+A R RREKIS++++ LQ LVP K D ASM
Sbjct: 305 IQPNSVGNGVGVKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASM 364
Query: 154 LDEAIRYVKFLKRQIRLL 171
LDE I YVKFL+ Q+++L
Sbjct: 365 LDEIIDYVKFLQLQVKVL 382
>gi|242038015|ref|XP_002466402.1| hypothetical protein SORBIDRAFT_01g007160 [Sorghum bicolor]
gi|241920256|gb|EER93400.1| hypothetical protein SORBIDRAFT_01g007160 [Sorghum bicolor]
Length = 292
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 59/73 (80%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
DPQS+ AR RRE+I+E+++ILQ+LVP GTK+D ++ML+EA+ YV+FL++QI++L S++
Sbjct: 212 DPQSLYARRRRERINERLKILQKLVPNGTKVDISTMLEEAVHYVRFLQQQIKMLSSDEMW 271
Query: 178 IVGDDHYNKLSLG 190
+ YN +SLG
Sbjct: 272 MYAPIAYNGMSLG 284
>gi|297738502|emb|CBI27747.3| unnamed protein product [Vitis vinifera]
Length = 389
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 107 KPKRRNIRI-SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
KP+ R R + DP S+A R RREKI+E+++ LQ LVP K D ASMLDE I YVKFL+
Sbjct: 146 KPRVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIEYVKFLQ 205
Query: 166 RQIRLL 171
Q+++L
Sbjct: 206 LQVKVL 211
>gi|356556714|ref|XP_003546668.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 475
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 41/54 (75%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE I YVKFL+ Q+++L
Sbjct: 262 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 315
>gi|356530637|ref|XP_003533887.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 452
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 41/54 (75%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE I YVKFL+ Q+++L
Sbjct: 234 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 287
>gi|356564915|ref|XP_003550692.1| PREDICTED: transcription factor bHLH69-like [Glycine max]
Length = 369
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 49/69 (71%), Gaps = 5/69 (7%)
Query: 107 KPKRRNIRI----SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVK 162
+PK+R +R + DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE I YVK
Sbjct: 192 QPKQR-VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVK 250
Query: 163 FLKRQIRLL 171
FL+ Q+++L
Sbjct: 251 FLQLQVKVL 259
>gi|77999289|gb|ABB16991.1| unknown [Solanum tuberosum]
Length = 304
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 47/70 (67%)
Query: 102 PTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYV 161
P +IR R + DP S+A R RRE+ISE+I+ LQ LVP K D A+MLDE + YV
Sbjct: 135 PPSIRPRVRARRGQATDPHSIAERLRRERISERIKALQELVPSCNKTDRAAMLDEILDYV 194
Query: 162 KFLKRQIRLL 171
KFL+ Q+++L
Sbjct: 195 KFLRLQVKVL 204
>gi|413943961|gb|AFW76610.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 473
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 107 KPKRRNIR-ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
KP+ R R + DP S+A R RREKIS++++ LQ LVP K D ASMLDE I YVKFL+
Sbjct: 314 KPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFLQ 373
Query: 166 RQIRLLQSNQCNIVG 180
Q+++L ++ G
Sbjct: 374 LQVKVLSMSRVGAPG 388
>gi|168057236|ref|XP_001780622.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667988|gb|EDQ54605.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 835
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 109 KRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQI 168
+RR + DPQS+AAR RREK +++IRILQ LVP G ++DT ML + YV+FL+ ++
Sbjct: 674 QRRRHGTATDPQSIAARTRREKFTDRIRILQGLVPNGERLDTVHMLSQTFEYVRFLQHKV 733
Query: 169 RLLQSNQ 175
L +N+
Sbjct: 734 WDLYNNK 740
>gi|449457905|ref|XP_004146688.1| PREDICTED: uncharacterized protein LOC101211609 [Cucumis sativus]
gi|449529094|ref|XP_004171536.1| PREDICTED: uncharacterized protein LOC101228749 [Cucumis sativus]
Length = 422
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 55 LLFGDHNNNNNNNNIIDQEEDEEPEE-------ELGAMKEMMYRIAAMQPVDIDPTTIRK 107
L G+ + + + N+++D P GA +M + + + ++
Sbjct: 143 LSLGNADLDRSQNDVVDGSCFRPPNSGGSLQSNSFGAPGNVMNQTPGGGSAGVSQSQPKQ 202
Query: 108 PKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQ 167
R + DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE I YVKFL+ Q
Sbjct: 203 KVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQ 262
Query: 168 IRLL 171
+++L
Sbjct: 263 VKVL 266
>gi|413968544|gb|AFW90609.1| basic helix-loop-helix protein BHLH3 [Solanum tuberosum]
Length = 303
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 47/70 (67%)
Query: 102 PTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYV 161
P +IR R + DP S+A R RRE+ISE+I+ LQ LVP K D A+MLDE + YV
Sbjct: 134 PPSIRPRVRARRGQATDPHSIAERLRRERISERIKALQELVPSCNKTDRAAMLDEILDYV 193
Query: 162 KFLKRQIRLL 171
KFL+ Q+++L
Sbjct: 194 KFLRLQVKVL 203
>gi|359487888|ref|XP_002274833.2| PREDICTED: transcription factor UNE12-like [Vitis vinifera]
Length = 331
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 49/79 (62%)
Query: 102 PTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYV 161
P IR R + DP S+A R RRE+I+E+++ LQ LVP K D A+MLDE + YV
Sbjct: 162 PPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSANKTDRAAMLDEIVDYV 221
Query: 162 KFLKRQIRLLQSNQCNIVG 180
KFL+ Q+++L ++ G
Sbjct: 222 KFLRLQVKVLSMSRLGGAG 240
>gi|255565001|ref|XP_002523493.1| conserved hypothetical protein [Ricinus communis]
gi|223537200|gb|EEF38832.1| conserved hypothetical protein [Ricinus communis]
Length = 474
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 50/84 (59%)
Query: 88 MMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTK 147
MM + A P R+ R + DP S+A R RRE+I+E+++ LQ LVP K
Sbjct: 235 MMNQPQASGSTGGAPAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK 294
Query: 148 MDTASMLDEAIRYVKFLKRQIRLL 171
D ASMLDE I YVKFL+ Q+++L
Sbjct: 295 TDKASMLDEIIDYVKFLQLQVKVL 318
>gi|357119229|ref|XP_003561348.1| PREDICTED: transcription factor UNE12-like [Brachypodium
distachyon]
Length = 288
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 52/88 (59%)
Query: 93 AAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTAS 152
AM P P R +R + DP S+A R RRE+I+E++R LQ LVP K D A+
Sbjct: 110 GAMVPQPHQPPAPRPKQRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAA 169
Query: 153 MLDEAIRYVKFLKRQIRLLQSNQCNIVG 180
MLDE + YVKFL+ Q+++L ++ G
Sbjct: 170 MLDEILDYVKFLRLQVKVLSMSRLGGAG 197
>gi|212724016|ref|NP_001131264.1| uncharacterized protein LOC100192577 [Zea mays]
gi|194691028|gb|ACF79598.1| unknown [Zea mays]
gi|323388613|gb|ADX60111.1| bHLH transcription factor [Zea mays]
Length = 438
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 107 KPKRRNIR-ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
KP+ R R + DP S+A R RREKIS++++ LQ LVP K D ASMLDE I YVKFL+
Sbjct: 279 KPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFLQ 338
Query: 166 RQIRLLQSNQCNIVG 180
Q+++L ++ G
Sbjct: 339 LQVKVLSMSRVGAPG 353
>gi|356574313|ref|XP_003555293.1| PREDICTED: transcription factor bHLH84-like [Glycine max]
Length = 353
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 67/99 (67%), Gaps = 3/99 (3%)
Query: 101 DPTTIR---KPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEA 157
D T+++ K N + DPQSV AR RRE+I+E++RILQ LVP GTK+D ++ML+EA
Sbjct: 250 DSTSLKLKGKKSTANRGSATDPQSVYARRRRERINERLRILQHLVPNGTKVDISTMLEEA 309
Query: 158 IRYVKFLKRQIRLLQSNQCNIVGDDHYNKLSLGATTNTT 196
++YVKFL+ QI+LL S+ + YN +++G N T
Sbjct: 310 VKYVKFLQLQIKLLSSDDLWMYAPIAYNGMNIGLDLNIT 348
>gi|449443257|ref|XP_004139396.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
gi|449523179|ref|XP_004168602.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
Length = 421
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 41/54 (75%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE I YVKFL+ Q+++L
Sbjct: 226 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 279
>gi|357137415|ref|XP_003570296.1| PREDICTED: uncharacterized protein LOC100827783 [Brachypodium
distachyon]
Length = 351
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 44/63 (69%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE I YVKFL+ Q+++L ++
Sbjct: 153 DPHSIAERLRRERIAERMKALQELVPSANKTDKASMLDEIIDYVKFLQVQVKVLSMSRLG 212
Query: 178 IVG 180
G
Sbjct: 213 GAG 215
>gi|414589493|tpg|DAA40064.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 471
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 47/68 (69%), Gaps = 4/68 (5%)
Query: 108 PKRRNIRI----SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKF 163
P R+ +R + DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE + YVKF
Sbjct: 235 PPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIVDYVKF 294
Query: 164 LKRQIRLL 171
L+ Q+++L
Sbjct: 295 LQLQVKVL 302
>gi|226496023|ref|NP_001141950.1| uncharacterized protein LOC100274099 [Zea mays]
gi|223945379|gb|ACN26773.1| unknown [Zea mays]
gi|414589494|tpg|DAA40065.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 470
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 47/68 (69%), Gaps = 4/68 (5%)
Query: 108 PKRRNIRI----SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKF 163
P R+ +R + DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE + YVKF
Sbjct: 234 PPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIVDYVKF 293
Query: 164 LKRQIRLL 171
L+ Q+++L
Sbjct: 294 LQLQVKVL 301
>gi|147836162|emb|CAN75431.1| hypothetical protein VITISV_021146 [Vitis vinifera]
Length = 486
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 58/116 (50%)
Query: 56 LFGDHNNNNNNNNIIDQEEDEEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRI 115
L G +N N + + GA +M + A P R+ R
Sbjct: 207 LHGSGQASNQAQNFHHPQGGSMQAQNYGAPATVMNQTPATGSAGGAPAQPRQRVRARRGQ 266
Query: 116 SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
+ P S+A R RRE+I+E+++ LQ LVP K D ASMLDE I YVKFL+ Q+++L
Sbjct: 267 ATHPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 322
>gi|326533782|dbj|BAK05422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 362
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE I YVKFL+ Q+++L +
Sbjct: 173 DPHSIAERLRRERIAERMKALQELVPSANKTDKASMLDEIIDYVKFLQLQVKVL--SMSR 230
Query: 178 IVGDDHYNKLSLGATTNTTIATTTASASAAG 208
+ G L+ G ++ ++ S+S G
Sbjct: 231 LGGAAAVGPLAAGLSSESSGNGNGTSSSGDG 261
>gi|294460878|gb|ADE76012.1| unknown [Picea sitchensis]
Length = 171
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 50/67 (74%), Gaps = 5/67 (7%)
Query: 115 ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK-----RQIR 169
+S DPQS+AARHRR KI ++ +ILQ +VPGG MDT SMLDEAI+YVKFL+ Q R
Sbjct: 37 LSMDPQSIAARHRRHKIRKRFKILQSMVPGGKNMDTVSMLDEAIQYVKFLQFMHFWLQSR 96
Query: 170 LLQSNQC 176
++Q N C
Sbjct: 97 IMQGNSC 103
>gi|224143968|ref|XP_002325140.1| predicted protein [Populus trichocarpa]
gi|222866574|gb|EEF03705.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%)
Query: 102 PTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYV 161
P R+ R + DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE I YV
Sbjct: 30 PAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYV 89
Query: 162 KFLKRQIRLL 171
KFL+ Q+++L
Sbjct: 90 KFLQLQVKVL 99
>gi|168048453|ref|XP_001776681.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671973|gb|EDQ58517.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 233
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Query: 96 QPVDIDPTTIRKPKRRNIRI-SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASML 154
QP+ P +P+ R R + DP S+A R RRE+I+E+++ LQ LVP K D ASML
Sbjct: 21 QPL---PGIGARPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNSNKTDKASML 77
Query: 155 DEAIRYVKFLKRQIRLLQSNQCNIVG 180
DE I YVKFL+ Q+++L ++ G
Sbjct: 78 DEIIDYVKFLQLQVKVLSMSRLGGAG 103
>gi|168043431|ref|XP_001774188.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674456|gb|EDQ60964.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 231
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 102 PTTIRKPKRRNIRI-SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRY 160
P +P+ R R + DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE I Y
Sbjct: 23 PGMGARPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNSNKTDKASMLDEIIDY 82
Query: 161 VKFLKRQIRLLQSNQCNIVG 180
VKFL+ Q+++L ++ G
Sbjct: 83 VKFLQLQVKVLSMSRLGGAG 102
>gi|225432880|ref|XP_002284047.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297737150|emb|CBI26351.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 49/79 (62%)
Query: 102 PTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYV 161
P IR R + DP S+A R RRE+I+E+++ LQ LVP K D A+MLDE + YV
Sbjct: 144 PPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNKTDRAAMLDEIVDYV 203
Query: 162 KFLKRQIRLLQSNQCNIVG 180
KFL+ Q+++L ++ G
Sbjct: 204 KFLRLQVKVLSMSRLGGAG 222
>gi|413937342|gb|AFW71893.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 489
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 107 KPKRRNIRI-SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
KP+ R R + DP S+A R RREKIS++++ LQ LVP + D ASMLDE I YVKFL+
Sbjct: 295 KPRVRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNRTDKASMLDEIIEYVKFLQ 354
Query: 166 RQIRLL 171
Q+++L
Sbjct: 355 LQVKVL 360
>gi|147771925|emb|CAN66761.1| hypothetical protein VITISV_032727 [Vitis vinifera]
Length = 337
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 49/79 (62%)
Query: 102 PTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYV 161
P IR R + DP S+A R RRE+I+E+++ LQ LVP K D A+MLDE + YV
Sbjct: 168 PPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNKTDRAAMLDEIVDYV 227
Query: 162 KFLKRQIRLLQSNQCNIVG 180
KFL+ Q+++L ++ G
Sbjct: 228 KFLRLQVKVLSMSRLGGAG 246
>gi|358347412|ref|XP_003637751.1| LAX [Medicago truncatula]
gi|355503686|gb|AES84889.1| LAX [Medicago truncatula]
Length = 298
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 41/53 (77%)
Query: 120 QSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
QS+AAR RR KI+EK + L +LVPGG KM+TA ML+ A YVKFL+ Q+ +LQ
Sbjct: 168 QSIAARERRRKITEKTQELGKLVPGGPKMNTAEMLNAAANYVKFLQAQVGMLQ 220
>gi|298204851|emb|CBI34158.3| unnamed protein product [Vitis vinifera]
Length = 261
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 49/79 (62%)
Query: 102 PTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYV 161
P IR R + DP S+A R RRE+I+E+++ LQ LVP K D A+MLDE + YV
Sbjct: 92 PPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSANKTDRAAMLDEIVDYV 151
Query: 162 KFLKRQIRLLQSNQCNIVG 180
KFL+ Q+++L ++ G
Sbjct: 152 KFLRLQVKVLSMSRLGGAG 170
>gi|226492543|ref|NP_001151181.1| LOC100284814 [Zea mays]
gi|195644858|gb|ACG41897.1| BHLH transcription factor [Zea mays]
Length = 390
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 57/99 (57%), Gaps = 13/99 (13%)
Query: 106 RKPKRRNIRI-SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFL 164
R+ ++R R + DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE I YVKFL
Sbjct: 184 RQQRQRAKRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFL 243
Query: 165 KRQIRLLQSNQCNIVGDDHYNKLSLGATTNTTIATTTAS 203
+ Q+++L ++ GAT T+ AS
Sbjct: 244 QLQVKVLSMSRLG------------GATAVGTLVAGIAS 270
>gi|55773907|dbj|BAD72512.1| bHLH transcription factor PTF1-like [Oryza sativa Japonica Group]
Length = 420
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 48/68 (70%), Gaps = 4/68 (5%)
Query: 108 PKRRNIRI----SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKF 163
P+++ +R + DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE I YVKF
Sbjct: 199 PRQQRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKF 258
Query: 164 LKRQIRLL 171
L+ Q+++L
Sbjct: 259 LQLQVKVL 266
>gi|218197712|gb|EEC80139.1| hypothetical protein OsI_21931 [Oryza sativa Indica Group]
Length = 420
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 48/68 (70%), Gaps = 4/68 (5%)
Query: 108 PKRRNIRI----SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKF 163
P+++ +R + DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE I YVKF
Sbjct: 199 PRQQRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKF 258
Query: 164 LKRQIRLL 171
L+ Q+++L
Sbjct: 259 LQLQVKVL 266
>gi|315175245|gb|ADT82841.1| barren stalk1/lax panicle1 [Joinvillea ascendens]
Length = 140
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 40/47 (85%)
Query: 127 RREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
RR +IS++ R+L+ LVPGG+KMDT SML++AI YV+FLK QIRL Q+
Sbjct: 1 RRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIDYVQFLKAQIRLQQT 47
>gi|295913203|gb|ADG57860.1| transcription factor [Lycoris longituba]
Length = 204
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 42/56 (75%)
Query: 116 SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
+ DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE I YVKFL+ Q+++L
Sbjct: 37 ATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIGYVKFLQLQVKVL 92
>gi|224061589|ref|XP_002300555.1| predicted protein [Populus trichocarpa]
gi|222847813|gb|EEE85360.1| predicted protein [Populus trichocarpa]
Length = 298
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 109 KRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQI 168
K+ + +S QS+AAR RR KI+EK + L +L+PGG KM+TA M A +YVKFL+ QI
Sbjct: 161 KKPSTGVSLSAQSIAARERRRKITEKTQQLGKLIPGGNKMNTAEMFQAASKYVKFLQAQI 220
Query: 169 RLLQ 172
+L+
Sbjct: 221 GILE 224
>gi|346682821|gb|AEO45564.1| abscisic acid-responsive protein bHLH2 [Populus koreana]
Length = 297
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 109 KRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQI 168
K+ + +S QS+AAR RR KI+EK + L +L+PGG KM+TA M A +YVKFL+ QI
Sbjct: 160 KKPSTGVSLSAQSIAARERRRKITEKTQQLGKLIPGGNKMNTAEMFQAASKYVKFLQAQI 219
Query: 169 RLLQ 172
+L+
Sbjct: 220 GILE 223
>gi|357118504|ref|XP_003560994.1| PREDICTED: transcription factor bHLH66-like [Brachypodium
distachyon]
Length = 388
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 47/68 (69%), Gaps = 4/68 (5%)
Query: 108 PKRRNIRI----SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKF 163
P++ +R + DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE I YVKF
Sbjct: 178 PRQTRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKF 237
Query: 164 LKRQIRLL 171
L+ Q+++L
Sbjct: 238 LQLQVKVL 245
>gi|413952903|gb|AFW85552.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 105 IRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFL 164
+R+ +R + DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE I YV+FL
Sbjct: 190 LRQRQRAKRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVRFL 249
Query: 165 KRQIRLL 171
+ Q+++L
Sbjct: 250 QLQVKVL 256
>gi|242047606|ref|XP_002461549.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
gi|241924926|gb|EER98070.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
Length = 277
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 107 KPKRRNIR-ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
+PK R R + DP S+A R RRE+I+E++R LQ LVP K D A+MLDE + YVKFL+
Sbjct: 112 RPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 171
Query: 166 RQIRLLQSNQCNIVG 180
Q+++L ++ G
Sbjct: 172 LQVKVLSMSRLGGAG 186
>gi|302801892|ref|XP_002982702.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
gi|300149801|gb|EFJ16455.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
Length = 443
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 41/54 (75%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE I YVKFL+ Q+++L
Sbjct: 268 DPHSIAERLRRERIAERMKSLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 321
>gi|226496235|ref|NP_001140213.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194698524|gb|ACF83346.1| unknown [Zea mays]
gi|195636992|gb|ACG37964.1| BHLH transcription factor [Zea mays]
gi|414883773|tpg|DAA59787.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 107 KPKRRNIR-ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
+PK R R + DP S+A R RRE+I+E++R LQ LVP K D A+MLDE + YVKFL+
Sbjct: 113 RPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 172
Query: 166 RQIRLLQSNQCNIVG 180
Q+++L ++ G
Sbjct: 173 LQVKVLSMSRLGGAG 187
>gi|194688984|gb|ACF78576.1| unknown [Zea mays]
gi|238014612|gb|ACR38341.1| unknown [Zea mays]
gi|413952840|gb|AFW85489.1| pi starvation-induced transcription factor1 [Zea mays]
Length = 481
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 95 MQPVDIDPTTIRKPKRRNIR-ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASM 153
+QP + KP+ R R + DP S+A R RREKIS++++ LQ LVP K D ASM
Sbjct: 305 IQPNSVGNGVGVKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASM 364
Query: 154 LDEAIRYVKFLKRQIRLLQSNQCNIVG 180
LDE I +VKFL+ Q+++L ++ G
Sbjct: 365 LDEIIDHVKFLQLQVKVLSMSRLGAPG 391
>gi|242063376|ref|XP_002452977.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
gi|241932808|gb|EES05953.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
Length = 393
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 106 RKPKRRNIRI-SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFL 164
R+ ++R R + DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE I YVKFL
Sbjct: 191 RQQRQRAKRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFL 250
Query: 165 KRQIRLL 171
+ Q+++L
Sbjct: 251 QLQVKVL 257
>gi|255580949|ref|XP_002531293.1| conserved hypothetical protein [Ricinus communis]
gi|223529126|gb|EEF31106.1| conserved hypothetical protein [Ricinus communis]
Length = 326
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%)
Query: 102 PTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYV 161
P IR R + DP S+A R RRE+I+E+++ LQ LVP K D A+M+DE + YV
Sbjct: 156 PPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPTANKTDRAAMIDEIVDYV 215
Query: 162 KFLKRQIRLLQSNQCNIVG 180
KFL+ Q+++L ++ G
Sbjct: 216 KFLRLQVKVLSMSRLGAAG 234
>gi|302798949|ref|XP_002981234.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
gi|300151288|gb|EFJ17935.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
Length = 443
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 41/54 (75%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE I YVKFL+ Q+++L
Sbjct: 268 DPHSIAERLRRERIAERMKSLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 321
>gi|223702396|gb|ACN21629.1| putative basic helix-loop-helix protein BHLH2 [Lotus japonicus]
gi|388506732|gb|AFK41432.1| unknown [Lotus japonicus]
Length = 342
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 49/79 (62%)
Query: 102 PTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYV 161
P IR R + DP S+A R RRE+I+E++R LQ LVP K D A+MLDE + YV
Sbjct: 173 PPGIRPRVRARRGQATDPHSIAERLRRERIAERMRALQELVPSINKSDRAAMLDEIVDYV 232
Query: 162 KFLKRQIRLLQSNQCNIVG 180
KFL+ Q+++L ++ G
Sbjct: 233 KFLRLQVKVLSMSRLGGAG 251
>gi|315175247|gb|ADT82842.1| barren stalk1/lax panicle1 [Streptochaeta angustifolia]
Length = 125
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Query: 127 RREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNIVGDDHYNK 186
RR +IS++ R+L+ LVPGG+KMDT SML++AI YVKFLK QI L Q+ DH
Sbjct: 2 RRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQISLHQAALMQHEERDH--- 58
Query: 187 LSLGATTNTTIATTTASASAAGALDP 212
L A TN + A LDP
Sbjct: 59 -GLSAFTNGGDHLMLPNQQAQVLLDP 83
>gi|226495509|ref|NP_001152044.1| LOC100285681 [Zea mays]
gi|195652123|gb|ACG45529.1| BHLH transcription factor [Zea mays]
gi|413932798|gb|AFW67349.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 107 KPKRRNIRI-SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
+PK R R + DP S+A R RRE+I+E++R LQ LVP K D A+MLDE + YVKFL+
Sbjct: 121 RPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 180
Query: 166 RQIRLLQSNQCNIVG 180
Q+++L ++ G
Sbjct: 181 LQVKVLSMSRLGGAG 195
>gi|224117892|ref|XP_002317694.1| predicted protein [Populus trichocarpa]
gi|222860759|gb|EEE98306.1| predicted protein [Populus trichocarpa]
Length = 298
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 109 KRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQI 168
K+ + +S QS+AAR RR KI+EK R L + +PGG KM+TA M A +YVKFL+ QI
Sbjct: 162 KKPSTGVSLSTQSIAARERRRKITEKTRELGKFIPGGHKMNTAEMFQAASKYVKFLQAQI 221
Query: 169 RLLQSNQCNIVGDDHYNKLSLGATTNTTIATTTAS 203
+L+ ++G NK + T+ T+ +
Sbjct: 222 GILE-----LMGSTQENKGPMHTQELQTLLVTSPA 251
>gi|115455925|ref|NP_001051563.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|31126765|gb|AAP44685.1| unknown protein [Oryza sativa Japonica Group]
gi|108711561|gb|ABF99356.1| Lipoamide dehydrogenase, putative, expressed [Oryza sativa Japonica
Group]
gi|113550034|dbj|BAF13477.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|215737529|dbj|BAG96659.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193907|gb|EEC76334.1| hypothetical protein OsI_13903 [Oryza sativa Indica Group]
Length = 294
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 107 KPKRRNIR-ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
+PK R R + DP S+A R RRE+I+E++R LQ LVP K D A+MLDE + YVKFL+
Sbjct: 130 RPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 189
Query: 166 RQIRLLQSNQCNIVG 180
Q+++L ++ G
Sbjct: 190 LQVKVLSMSRLGGAG 204
>gi|449435928|ref|XP_004135746.1| PREDICTED: uncharacterized protein LOC101220022 [Cucumis sativus]
gi|449515945|ref|XP_004165008.1| PREDICTED: uncharacterized protein LOC101226994 [Cucumis sativus]
Length = 308
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 41/53 (77%)
Query: 120 QSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
Q++AAR RR KI+ K + L LVPGG+KM+TA ML+ A +YVKFL+ Q+ +LQ
Sbjct: 189 QTIAARERRRKITVKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQ 241
>gi|125596454|gb|EAZ36234.1| hypothetical protein OsJ_20554 [Oryza sativa Japonica Group]
Length = 189
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 39/43 (90%)
Query: 115 ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEA 157
+S +PQSVAAR RRE++S+++R LQRLVPGG ++DTASML+EA
Sbjct: 120 VSSEPQSVAARLRRERVSQRMRALQRLVPGGARLDTASMLEEA 162
>gi|222625964|gb|EEE60096.1| hypothetical protein OsJ_12958 [Oryza sativa Japonica Group]
Length = 294
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 107 KPKRRNIR-ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
+PK R R + DP S+A R RRE+I+E++R LQ LVP K D A+MLDE + YVKFL+
Sbjct: 130 RPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 189
Query: 166 RQIRLLQSNQCNIVG 180
Q+++L ++ G
Sbjct: 190 LQVKVLSMSRLGGAG 204
>gi|194696204|gb|ACF82186.1| unknown [Zea mays]
gi|414883772|tpg|DAA59786.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 193
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 107 KPKRRNIR-ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
+PK R R + DP S+A R RRE+I+E++R LQ LVP K D A+MLDE + YVKFL+
Sbjct: 21 RPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 80
Query: 166 RQIRLLQSNQCNIVG 180
Q+++L ++ G
Sbjct: 81 LQVKVLSMSRLGGAG 95
>gi|356576702|ref|XP_003556469.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 331
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 49/79 (62%)
Query: 102 PTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYV 161
P IR R + DP S+A R RRE+I+E+++ LQ LVP K D A+MLDE + YV
Sbjct: 162 PPGIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINKTDRAAMLDEIVDYV 221
Query: 162 KFLKRQIRLLQSNQCNIVG 180
KFL+ Q+++L ++ G
Sbjct: 222 KFLRLQVKVLSMSRLGGAG 240
>gi|222636553|gb|EEE66685.1| hypothetical protein OsJ_23336 [Oryza sativa Japonica Group]
Length = 342
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 107 KPKRRNIR-ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
+PK R R + DP S+A R RRE+I+E++R LQ LVP K D A+MLDE + YVKFL+
Sbjct: 178 RPKVRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNKTDRAAMLDEILDYVKFLR 237
Query: 166 RQIRLLQSNQCNIVG 180
Q+++L ++ G
Sbjct: 238 LQVKVLSMSRLGGAG 252
>gi|125557459|gb|EAZ02995.1| hypothetical protein OsI_25136 [Oryza sativa Indica Group]
Length = 293
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 107 KPKRRNIR-ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
+PK R R + DP S+A R RRE+I+E++R LQ LVP K D A+MLDE + YVKFL+
Sbjct: 129 RPKVRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNKTDRAAMLDEILDYVKFLR 188
Query: 166 RQIRLLQSNQCNIVG 180
Q+++L ++ G
Sbjct: 189 LQVKVLSMSRLGGAG 203
>gi|242094954|ref|XP_002437967.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
gi|241916190|gb|EER89334.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
Length = 447
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 41/54 (75%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE I YVKFL+ Q+++L
Sbjct: 222 DPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 275
>gi|323388949|gb|ADX60279.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 294
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 107 KPKRRNIR-ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
+PK R R + DP S+A R RRE+I+E++R LQ LVP K D A+MLDE + YVKFL+
Sbjct: 130 RPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 189
Query: 166 RQIRLLQSNQCNIVG 180
Q+++L ++ G
Sbjct: 190 LQVKVLSISRLGGAG 204
>gi|315175249|gb|ADT82843.1| barren stalk1/lax panicle1 [Pharus latifolius]
Length = 141
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 39/47 (82%)
Query: 127 RREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
RR +IS++ R+L+ LVPGG+KMDT SML++AI YVKFLK Q+ L Q+
Sbjct: 2 RRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVSLHQA 48
>gi|46390356|dbj|BAD15821.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
gi|215768923|dbj|BAH01152.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623080|gb|EEE57212.1| hypothetical protein OsJ_07173 [Oryza sativa Japonica Group]
Length = 524
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 107 KPKRRNIRI-SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
KP+ R R + DP S+A R RREKIS++++ LQ LVP K + ASMLDE I YVKFL+
Sbjct: 311 KPRVRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNKTNKASMLDEIIDYVKFLQ 370
Query: 166 RQIRLL 171
Q+++L
Sbjct: 371 LQVKVL 376
>gi|315175251|gb|ADT82844.1| barren stalk1/lax panicle1 [Miscanthus sinensis]
Length = 162
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 39/47 (82%)
Query: 127 RREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
RR +IS++ R+L+ LVPGG+KMDT SML++AI YVKFLK QI L Q+
Sbjct: 2 RRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQISLHQA 48
>gi|125539931|gb|EAY86326.1| hypothetical protein OsI_07700 [Oryza sativa Indica Group]
Length = 524
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 107 KPKRRNIRI-SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
KP+ R R + DP S+A R RREKIS++++ LQ LVP K + ASMLDE I YVKFL+
Sbjct: 311 KPRVRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNKTNKASMLDEIIDYVKFLQ 370
Query: 166 RQIRLL 171
Q+++L
Sbjct: 371 LQVKVL 376
>gi|449435746|ref|XP_004135655.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 318
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%)
Query: 102 PTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYV 161
P +R R + DP S+A R RRE+I+E+++ LQ LVP K D A+MLDE + YV
Sbjct: 150 PPQVRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYV 209
Query: 162 KFLKRQIRLLQSNQCNIVG 180
KFL+ Q+++L ++ G
Sbjct: 210 KFLRLQVKVLSMSRLGGAG 228
>gi|357444409|ref|XP_003592482.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481530|gb|AES62733.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 157
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 41/45 (91%)
Query: 127 RREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
RRE+I+E++RILQ LVP GTK+D ++ML+EA++YVKFL+ QI+LL
Sbjct: 87 RRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 131
>gi|357453543|ref|XP_003597049.1| Transcription factor bHLH117 [Medicago truncatula]
gi|355486097|gb|AES67300.1| Transcription factor bHLH117 [Medicago truncatula]
Length = 285
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 42/55 (76%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
PQS AR RR+K+SEK R LQ+L+P +MD A++ +EA +YVKFL+ Q+ +LQS
Sbjct: 146 PQSNLARQRRQKLSEKTRCLQKLMPWDKRMDQATLYEEAYKYVKFLQAQLSVLQS 200
>gi|356535169|ref|XP_003536121.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 328
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 49/79 (62%)
Query: 102 PTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYV 161
P IR R + DP S+A R RRE+I+E+++ LQ LVP K D A+MLDE + YV
Sbjct: 159 PPGIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINKTDRAAMLDEIVDYV 218
Query: 162 KFLKRQIRLLQSNQCNIVG 180
KFL+ Q+++L ++ G
Sbjct: 219 KFLRLQVKVLSMSRLGGAG 237
>gi|413937341|gb|AFW71892.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 425
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 107 KPKRRNIRI-SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
KP+ R R + DP S+A R RREKIS++++ LQ LVP + D ASMLDE I YVKFL+
Sbjct: 295 KPRVRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNRTDKASMLDEIIEYVKFLQ 354
Query: 166 RQIRL 170
Q+++
Sbjct: 355 LQVKV 359
>gi|242037799|ref|XP_002466294.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
gi|241920148|gb|EER93292.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
Length = 283
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 107 KPKRRNIRI-SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
+PK R R + DP S+A R RRE+I+E++R LQ LVP K D A MLDE + YVKFL+
Sbjct: 119 RPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAVMLDEILDYVKFLR 178
Query: 166 RQIRLLQSNQCNIVG 180
Q+++L ++ G
Sbjct: 179 LQVKVLSMSRLGGAG 193
>gi|315175241|gb|ADT82839.1| barren stalk1/lax panicle1 [Chasmanthium latifolium]
Length = 151
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 39/47 (82%)
Query: 127 RREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
RR +IS++ R+L+ LVPGG+KMDT SML++AI YVKFLK QI L Q+
Sbjct: 2 RRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKGQISLHQA 48
>gi|449530006|ref|XP_004171988.1| PREDICTED: transcription factor UNE12-like, partial [Cucumis
sativus]
Length = 219
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%)
Query: 102 PTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYV 161
P +R R + DP S+A R RRE+I+E+++ LQ LVP K D A+MLDE + YV
Sbjct: 51 PPQVRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYV 110
Query: 162 KFLKRQIRLLQSNQCNIVG 180
KFL+ Q+++L ++ G
Sbjct: 111 KFLRLQVKVLSMSRLGGAG 129
>gi|218202150|gb|EEC84577.1| hypothetical protein OsI_31377 [Oryza sativa Indica Group]
Length = 414
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 39/52 (75%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIR 169
DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE I YVKFL+ Q++
Sbjct: 168 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVK 219
>gi|413968542|gb|AFW90608.1| beta-fructofuranosidase protein [Solanum tuberosum]
Length = 298
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 41/54 (75%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
DP S+A R RRE+ISE+I+ LQ LVP K D A+++DE + YVKFL+ Q+++L
Sbjct: 143 DPHSIAERLRRERISERIKALQELVPNCNKTDRAALVDEILDYVKFLRLQVKVL 196
>gi|302764076|ref|XP_002965459.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
gi|302825088|ref|XP_002994179.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300137980|gb|EFJ04769.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300166273|gb|EFJ32879.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
Length = 143
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE + YVKFL+ Q+++L
Sbjct: 13 DPHSIAERLRRERIAERMKALQDLVPNANKTDKASMLDEIVDYVKFLQLQVKVL 66
>gi|224123420|ref|XP_002319074.1| predicted protein [Populus trichocarpa]
gi|222857450|gb|EEE94997.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 48/79 (60%)
Query: 102 PTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYV 161
P IR R + DP S+A R RR +I+E+++ LQ LVP K D A+MLDE + YV
Sbjct: 9 PPGIRPRVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNKTDRAAMLDEIVDYV 68
Query: 162 KFLKRQIRLLQSNQCNIVG 180
KFL+ QI++L ++ G
Sbjct: 69 KFLRLQIKVLSMSRLGAAG 87
>gi|242049278|ref|XP_002462383.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
gi|241925760|gb|EER98904.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
Length = 466
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 38/51 (74%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQI 168
DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE I YVKFL+ Q+
Sbjct: 248 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQV 298
>gi|222641577|gb|EEE69709.1| hypothetical protein OsJ_29376 [Oryza sativa Japonica Group]
Length = 410
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 38/51 (74%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQI 168
DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE I YVKFL+ Q+
Sbjct: 259 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQV 309
>gi|255586237|ref|XP_002533773.1| DNA binding protein, putative [Ricinus communis]
gi|223526310|gb|EEF28618.1| DNA binding protein, putative [Ricinus communis]
Length = 288
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 47/70 (67%), Gaps = 4/70 (5%)
Query: 103 TTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVK 162
+ ++KP ++ QS+AAR RR KI+E+ + L +L+PGG KM+TA ML A YVK
Sbjct: 153 SCVKKPNGGSLSA----QSIAARERRRKITERTQELGKLIPGGNKMNTAEMLQSASNYVK 208
Query: 163 FLKRQIRLLQ 172
FL+ Q+ +L+
Sbjct: 209 FLQAQVGILE 218
>gi|224131266|ref|XP_002328496.1| predicted protein [Populus trichocarpa]
gi|222838211|gb|EEE76576.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%)
Query: 102 PTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYV 161
P IR R + DP S+A R RR +I+E+++ LQ LVP K D A+MLDE + YV
Sbjct: 13 PPGIRPRVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNKTDRAAMLDEIVDYV 72
Query: 162 KFLKRQIRLLQSNQCNIVG 180
KFL+ Q+++L ++ G
Sbjct: 73 KFLRLQVKVLSMSRLGAAG 91
>gi|357142621|ref|XP_003572635.1| PREDICTED: uncharacterized protein LOC100834217 [Brachypodium
distachyon]
Length = 479
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 40/54 (74%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
DP S+A R RREKIS++++ LQ LVP K D ASML+E I Y+KFL+ Q ++L
Sbjct: 291 DPHSIAERLRREKISDRMKNLQELVPNSNKTDKASMLEEIIEYIKFLQLQTKVL 344
>gi|224145129|ref|XP_002325537.1| predicted protein [Populus trichocarpa]
gi|222862412|gb|EEE99918.1| predicted protein [Populus trichocarpa]
Length = 246
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 46/67 (68%), Gaps = 3/67 (4%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL--QSNQ 175
P+S+A R RR +IS++IR LQ LVP K +TA MLDEA+ YVKFL+RQI+ L Q +
Sbjct: 180 PRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEALAYVKFLQRQIQELTEQQRK 239
Query: 176 CNIVGDD 182
C + +
Sbjct: 240 CKCIAKE 246
>gi|414885459|tpg|DAA61473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 344
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 4/65 (6%)
Query: 108 PKRRNIRI----SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKF 163
P R+ +R + DP S+A R RRE+I+E+++ LQ LV K D ASMLDE I YVKF
Sbjct: 140 PPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVSNANKTDKASMLDEIIDYVKF 199
Query: 164 LKRQI 168
L+ Q+
Sbjct: 200 LQLQV 204
>gi|56784181|dbj|BAD81566.1| putative BP-5 protein [Oryza sativa Japonica Group]
Length = 565
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
Query: 98 VDIDPTTIRKPKRRNIRISDDPQ--SVAARHRREKISEKIRILQRLVPGGTKMDTASMLD 155
+D +P +RK R+ + S + +++ R RR++I+EK+R LQ L+P K+D ASMLD
Sbjct: 293 LDDEPGVLRKSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLD 352
Query: 156 EAIRYVKFLKRQIRLL 171
EAI Y+K L+ Q++++
Sbjct: 353 EAIEYLKTLQLQVQMM 368
>gi|357119169|ref|XP_003561318.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 240
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 53/85 (62%), Gaps = 7/85 (8%)
Query: 94 AMQPVDIDPTTIRKPKRRNIRI------SDDPQSVAARHRREKISEKIRILQRLVPGGTK 147
A + VD +PT PK+ I + + D S+A R RREKISE++++LQ LVPG K
Sbjct: 91 ASKVVDRNPTPPEPPKQDYIHVRARRGQATDSHSIAERARREKISERMKMLQDLVPGCNK 150
Query: 148 -MDTASMLDEAIRYVKFLKRQIRLL 171
+ AS+LDE I Y++ L+RQ+ L
Sbjct: 151 VIGKASVLDEIINYIQALQRQVEFL 175
>gi|297596562|ref|NP_001042775.2| Os01g0286100 [Oryza sativa Japonica Group]
gi|215717101|dbj|BAG95464.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673123|dbj|BAF04689.2| Os01g0286100 [Oryza sativa Japonica Group]
Length = 637
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
Query: 98 VDIDPTTIRKPKRRNIRISDDPQ--SVAARHRREKISEKIRILQRLVPGGTKMDTASMLD 155
+D +P +RK R+ + S + +++ R RR++I+EK+R LQ L+P K+D ASMLD
Sbjct: 365 LDDEPGVLRKSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLD 424
Query: 156 EAIRYVKFLKRQIRLL 171
EAI Y+K L+ Q++++
Sbjct: 425 EAIEYLKTLQLQVQMM 440
>gi|218188008|gb|EEC70435.1| hypothetical protein OsI_01449 [Oryza sativa Indica Group]
Length = 693
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
Query: 98 VDIDPTTIRKPKRRNIRISDDPQ--SVAARHRREKISEKIRILQRLVPGGTKMDTASMLD 155
+D +P +RK R+ + S + +++ R RR++I+EK+R LQ L+P K+D ASMLD
Sbjct: 421 LDDEPGVLRKSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLD 480
Query: 156 EAIRYVKFLKRQIRLL 171
EAI Y+K L+ Q++++
Sbjct: 481 EAIEYLKTLQLQVQMM 496
>gi|222618221|gb|EEE54353.1| hypothetical protein OsJ_01348 [Oryza sativa Japonica Group]
Length = 705
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
Query: 98 VDIDPTTIRKPKRRNIRISDDPQ--SVAARHRREKISEKIRILQRLVPGGTKMDTASMLD 155
+D +P +RK R+ + S + +++ R RR++I+EK+R LQ L+P K+D ASMLD
Sbjct: 433 LDDEPGVLRKSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLD 492
Query: 156 EAIRYVKFLKRQIRLL 171
EAI Y+K L+ Q++++
Sbjct: 493 EAIEYLKTLQLQVQMM 508
>gi|159505446|gb|ABW97699.1| putative bHLH transcription factor [Citrus sinensis]
Length = 370
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ILQ+LVPG K+ A MLDE I YV+FL+ Q+ L
Sbjct: 192 DSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
>gi|414885458|tpg|DAA61472.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 4/65 (6%)
Query: 108 PKRRNIRI----SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKF 163
P R+ +R + DP S+A R RRE+I+E+++ LQ LV K D ASMLDE I YVKF
Sbjct: 112 PPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVSNANKTDKASMLDEIIDYVKF 171
Query: 164 LKRQI 168
L+ Q+
Sbjct: 172 LQLQV 176
>gi|225445889|ref|XP_002276403.1| PREDICTED: uncharacterized protein LOC100243222 [Vitis vinifera]
Length = 519
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 80 EELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQ 139
+ GA +M + A P R+ R + DP S+A R RRE+I+E+++ LQ
Sbjct: 256 QNYGAPATVMNQTPATGSAGGAPAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQ 315
Query: 140 RLVPGGTKM------DTASMLDEAIRYVKFLKRQ 167
LVP K+ D ASMLDE I YVKFL+ Q
Sbjct: 316 ELVPNANKVIHPTLTDKASMLDEIIDYVKFLQLQ 349
>gi|414871802|tpg|DAA50359.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 562
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 61 NNNNNNNNIIDQEEDEEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQ 120
+N ++ +D E+ E P E+ + M +A P + TT R+ + +
Sbjct: 289 SNRSSKRKRLDTEDSESPSEDAESGSAAM--LARKPPQKM--TTARRSRAAEV------H 338
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNIV 179
+++ R RR++I+EK+R LQ L+P K D ASMLDEAI Y+K L+ Q++++ I
Sbjct: 339 NLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQVQMMWMGSAGIA 397
>gi|297726953|ref|NP_001175840.1| Os09g0417400 [Oryza sativa Japonica Group]
gi|50253024|dbj|BAD29274.1| bHLH transcription factor PTF1-like protein [Oryza sativa Japonica
Group]
gi|255678901|dbj|BAH94568.1| Os09g0417400 [Oryza sativa Japonica Group]
Length = 499
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 3/55 (5%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM---DTASMLDEAIRYVKFLKRQIR 169
DP S+A R RRE+I+E+++ LQ LVP K+ D ASMLDE I YVKFL+ Q++
Sbjct: 259 DPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVKFLQLQVK 313
>gi|326514040|dbj|BAJ92170.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 52/85 (61%)
Query: 87 EMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGT 146
E+M + + D+ T +KP R + +++ R RR++I+EK+R LQ LVP
Sbjct: 209 EVMQQDVESESADVTCETAQKPATAKRRRAAQVHNLSERRRRDRINEKMRALQELVPHCN 268
Query: 147 KMDTASMLDEAIRYVKFLKRQIRLL 171
K D ASMLDEAI Y+K L+ Q++++
Sbjct: 269 KTDKASMLDEAIEYLKSLQLQLQVM 293
>gi|226493691|ref|NP_001147809.1| PIL5 [Zea mays]
gi|195613866|gb|ACG28763.1| PIL5 [Zea mays]
Length = 539
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 61 NNNNNNNNIIDQEEDEEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQ 120
+N ++ +D E+ E P E+ + M +A P + TT R+ + +
Sbjct: 289 SNRSSKRKRLDTEDSESPSEDAESGSAAM--LARKPPQKM--TTARRSRAAEV------H 338
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNIV 179
+++ R RR++I+EK+R LQ L+P K D ASMLDEAI Y+K L+ Q++++ I
Sbjct: 339 NLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQVQMMWMGSAGIA 397
>gi|238008194|gb|ACR35132.1| unknown [Zea mays]
gi|413946840|gb|AFW79489.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 638
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 18/98 (18%)
Query: 74 EDEEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISE 133
+D++P++E G M+ R A + R + +++ R RR++I+E
Sbjct: 361 QDDDPDDESGGMRRSCSRGAK--------------RSRTAEV----HNLSERRRRDRINE 402
Query: 134 KIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
K+R LQ L+P K+D ASMLDEAI Y+K L+ Q++++
Sbjct: 403 KMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 440
>gi|224136007|ref|XP_002327358.1| predicted protein [Populus trichocarpa]
gi|222835728|gb|EEE74163.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 46/67 (68%), Gaps = 3/67 (4%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL--QSNQ 175
P+S+A R RR +IS++IR LQ LVP K +TA ML+EA+ YVKFL+RQI+ L Q +
Sbjct: 198 PRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVDYVKFLQRQIQELTEQQRK 257
Query: 176 CNIVGDD 182
C + +
Sbjct: 258 CKCMAKE 264
>gi|242038745|ref|XP_002466767.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
gi|241920621|gb|EER93765.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
Length = 535
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 63/111 (56%), Gaps = 10/111 (9%)
Query: 61 NNNNNNNNIIDQEEDEEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQ 120
+N ++ +D E+ E P E+ A E +A P + TT R+ + +
Sbjct: 284 SNRSSKRKRLDTEDSESPSED--AESESAAMLARKPPQKM--TTARRSRAAEV------H 333
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
+++ R RR++I+EK+R LQ L+P K D ASMLDEAI Y+K L+ Q++++
Sbjct: 334 NLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQVQMM 384
>gi|242032639|ref|XP_002463714.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
gi|241917568|gb|EER90712.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
Length = 253
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 63/112 (56%), Gaps = 8/112 (7%)
Query: 61 NNNNNNNNIIDQEEDEEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQ 120
N ++NNN + E + +P A K + + A +P D +R RR + D
Sbjct: 83 NKSSNNNGSLRTEAETDPRS---AGKAVSKSLPAAEPPKQDYIHVRA--RRGQ--ATDSH 135
Query: 121 SVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE++++LQ LVPG K + AS+LDE I Y++ L+ Q+ L
Sbjct: 136 SLAERARREKISERMKVLQDLVPGCNKVIGKASVLDEIINYIQSLQCQVEFL 187
>gi|238015240|gb|ACR38655.1| unknown [Zea mays]
Length = 435
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 18/98 (18%)
Query: 74 EDEEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISE 133
+D++P++E G M+ R A + R + + ++ R RR++I+E
Sbjct: 158 QDDDPDDESGGMRRSCSRGAK--------------RSRTAEVHN----LSERRRRDRINE 199
Query: 134 KIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
K+R LQ L+P K+D ASMLDEAI Y+K L+ Q++++
Sbjct: 200 KMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 237
>gi|357153670|ref|XP_003576528.1| PREDICTED: uncharacterized protein LOC100826168 [Brachypodium
distachyon]
Length = 458
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 3/55 (5%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM---DTASMLDEAIRYVKFLKRQIR 169
DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE I YVKFL+ Q++
Sbjct: 247 DPHSIAERLRRERIAERMKALQELVPNANKWMQTDKASMLDEIIDYVKFLQLQVK 301
>gi|224122148|ref|XP_002318764.1| predicted protein [Populus trichocarpa]
gi|222859437|gb|EEE96984.1| predicted protein [Populus trichocarpa]
Length = 359
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 83 GAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLV 142
G MK+ R A++ V +P T R + D S+A R RREKISE++++LQRLV
Sbjct: 146 GDMKQEEKRPKAVKKVPEEPPTGYVHVRARRGQATDSHSLAERVRREKISERMKMLQRLV 205
Query: 143 PGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
PG K+ A MLDE I YV+ L+ Q+ L
Sbjct: 206 PGCDKVTGKALMLDEIINYVQSLQNQVEFL 235
>gi|449448502|ref|XP_004142005.1| PREDICTED: uncharacterized protein LOC101217594 [Cucumis sativus]
Length = 406
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 66/121 (54%), Gaps = 20/121 (16%)
Query: 51 SSSTLLFGDHNNNNNNNNIIDQEEDEEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKR 110
SS+++ DHN N+ E D E EE L A+ E + P +P + K R
Sbjct: 130 SSTSVGASDHNEND--------EFDCESEEGLEALVEEL-------PTKPNPRSSSKRSR 174
Query: 111 RNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRL 170
+ + +++ + RR +I+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q+++
Sbjct: 175 -----AAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQM 229
Query: 171 L 171
L
Sbjct: 230 L 230
>gi|224124534|ref|XP_002330047.1| predicted protein [Populus trichocarpa]
gi|222871472|gb|EEF08603.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 20/106 (18%)
Query: 71 DQEEDEEP-----EEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAAR 125
D EE E P EE +GA K+ P +RN + + +++ R
Sbjct: 423 DTEESEGPSEDVEEESVGAKKQA-------------PARAGNGSKRNR--AAEVHNLSER 467
Query: 126 HRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
RR++I+EK+R LQ L+P K+D ASMLDEAI Y+K L+ Q++++
Sbjct: 468 RRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIM 513
>gi|449485549|ref|XP_004157205.1| PREDICTED: uncharacterized protein LOC101227644 [Cucumis sativus]
Length = 415
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 66/121 (54%), Gaps = 20/121 (16%)
Query: 51 SSSTLLFGDHNNNNNNNNIIDQEEDEEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKR 110
SS+++ DHN N+ E D E EE L A+ E + P +P + K R
Sbjct: 130 SSTSVGASDHNEND--------EFDCESEEGLEALVEEL-------PTKPNPRSSSKRSR 174
Query: 111 RNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRL 170
+ + +++ + RR +I+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q+++
Sbjct: 175 -----AAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQM 229
Query: 171 L 171
L
Sbjct: 230 L 230
>gi|17027282|gb|AAL34136.1|AC090713_23 putative transcription factor [Oryza sativa Japonica Group]
gi|108711234|gb|ABF99029.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|125588017|gb|EAZ28681.1| hypothetical protein OsJ_12693 [Oryza sativa Japonica Group]
Length = 310
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 62/98 (63%), Gaps = 13/98 (13%)
Query: 109 KRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQI 168
+RR+ I+ QS+ AR RRE+I+ ++RILQ+LVP GTK+D ++ML+EA+ YVKFL+ QI
Sbjct: 213 RRRSATIA---QSLYARRRRERINGRLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQI 269
Query: 169 R----------LLQSNQCNIVGDDHYNKLSLGATTNTT 196
+ +L S++ + YN + LG N +
Sbjct: 270 KVEVQIVCHDQMLSSDELWMYAPIVYNGMDLGIDLNIS 307
>gi|147774847|emb|CAN69076.1| hypothetical protein VITISV_004761 [Vitis vinifera]
Length = 302
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 7/83 (8%)
Query: 96 QPVDIDPTTIRKPKRRNIRI------SDDPQSVAARHRREKISEKIRILQRLVPGGTK-M 148
+PV+ +P + PK+ I + + D S+A R RREKISE+++ILQ LVPG K +
Sbjct: 132 KPVEQNPQSADPPKQDFIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 191
Query: 149 DTASMLDEAIRYVKFLKRQIRLL 171
A +LDE I Y++ L+RQ+ L
Sbjct: 192 GKALVLDEIINYIQSLQRQVEFL 214
>gi|225424835|ref|XP_002272776.1| PREDICTED: transcription factor BPE-like [Vitis vinifera]
Length = 277
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 7/83 (8%)
Query: 96 QPVDIDPTTIRKPKRRNIRI------SDDPQSVAARHRREKISEKIRILQRLVPGGTK-M 148
+PV+ +P + PK+ I + + D S+A R RREKISE+++ILQ LVPG K +
Sbjct: 132 KPVEQNPQSADPPKQDFIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 191
Query: 149 DTASMLDEAIRYVKFLKRQIRLL 171
A +LDE I Y++ L+RQ+ L
Sbjct: 192 GKALVLDEIINYIQSLQRQVEFL 214
>gi|351722090|ref|NP_001236464.1| uncharacterized protein LOC100527723 [Glycine max]
gi|255633050|gb|ACU16880.1| unknown [Glycine max]
Length = 157
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 44/64 (68%), Gaps = 3/64 (4%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSNQ-- 175
P+S+A R RR +IS++IR LQ LVP K +TA MLDEA+ YVKFL++QI L +Q
Sbjct: 91 PRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVAYVKFLQKQIEELSEHQRR 150
Query: 176 CNIV 179
C V
Sbjct: 151 CKCV 154
>gi|224105381|ref|XP_002313791.1| predicted protein [Populus trichocarpa]
gi|222850199|gb|EEE87746.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
Query: 103 TTIRKPKRRNIRI----SDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEA 157
T ++KP ++R + D S+A R RREKISE+++ LQ LVPG K+ A MLDE
Sbjct: 227 TEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEI 286
Query: 158 IRYVKFLKRQIRLL 171
I YV+ L+RQ+ L
Sbjct: 287 INYVQSLQRQVEFL 300
>gi|339778403|gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 20/106 (18%)
Query: 71 DQEEDEEP-----EEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAAR 125
D EE E P EE +GA K P + R + + +++ R
Sbjct: 287 DTEESEGPSEDAEEESVGAKK---------------PASARAGNGSKRGRAAEVHNLSER 331
Query: 126 HRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
RR++I+EK+R LQ L+P K+D ASMLDEAI Y+K L+ Q++++
Sbjct: 332 RRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIM 377
>gi|339778389|gb|AEK06076.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 20/106 (18%)
Query: 71 DQEEDEEP-----EEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAAR 125
D EE E P EE +GA K P + R + + +++ R
Sbjct: 287 DTEESEGPSEDAEEESVGAKK---------------PASARAGNGSKRGRAAEVHNLSER 331
Query: 126 HRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
RR++I+EK+R LQ L+P K+D ASMLDEAI Y+K L+ Q++++
Sbjct: 332 RRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIM 377
>gi|339778391|gb|AEK06077.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778393|gb|AEK06078.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778395|gb|AEK06079.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778399|gb|AEK06081.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778401|gb|AEK06082.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778405|gb|AEK06084.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778407|gb|AEK06085.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778409|gb|AEK06086.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778411|gb|AEK06087.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778413|gb|AEK06088.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778415|gb|AEK06089.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778417|gb|AEK06090.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778419|gb|AEK06091.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778421|gb|AEK06092.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778423|gb|AEK06093.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778425|gb|AEK06094.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778427|gb|AEK06095.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778429|gb|AEK06096.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 20/106 (18%)
Query: 71 DQEEDEEP-----EEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAAR 125
D EE E P EE +GA K P + R + + +++ R
Sbjct: 287 DTEESEGPSEDAEEESVGAKK---------------PASARAGNGSKRGRAAEVHNLSER 331
Query: 126 HRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
RR++I+EK+R LQ L+P K+D ASMLDEAI Y+K L+ Q++++
Sbjct: 332 RRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIM 377
>gi|218193803|gb|EEC76230.1| hypothetical protein OsI_13645 [Oryza sativa Indica Group]
Length = 291
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 62/98 (63%), Gaps = 13/98 (13%)
Query: 109 KRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQI 168
+RR+ I+ QS+ AR RRE+I+ ++RILQ+LVP GTK+D ++ML+EA+ YVKFL+ QI
Sbjct: 194 RRRSATIA---QSLYARRRRERINGRLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQI 250
Query: 169 R----------LLQSNQCNIVGDDHYNKLSLGATTNTT 196
+ +L S++ + YN + LG N +
Sbjct: 251 KVEVQIVCHDQMLSSDELWMYAPIVYNGMDLGIDLNIS 288
>gi|449461645|ref|XP_004148552.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 523
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
Query: 103 TTIRKPKRRNIRI----SDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEA 157
+ ++KP ++R + D S+A R RREKISE+++ LQ LVPG K+ A MLDE
Sbjct: 239 SEVQKPDYIHVRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEI 298
Query: 158 IRYVKFLKRQIRLL 171
I YV+ L+RQ+ L
Sbjct: 299 INYVQSLQRQVEFL 312
>gi|356552284|ref|XP_003544498.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 429
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 72 QEEDEEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRI------SDDPQSVAAR 125
+E ++ P+ E ++ + + Q D + + PK I + + + S+A R
Sbjct: 220 KEHEKRPKGEQNNGADVRGKQSVKQAKDNNSQSGEAPKENFIHVRARRGQATNSHSLAER 279
Query: 126 HRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
RREKISE++R+LQ LVPG K+ A MLDE I YV+ L++Q+ L
Sbjct: 280 VRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 326
>gi|371534690|gb|AEX32796.1| phytochrome-interacting factor 3 [Malus x domestica]
Length = 713
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 39/50 (78%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR++I+EK+R LQ L+P K+D ASMLDEAI Y+K L+ Q++++
Sbjct: 462 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQMM 511
>gi|388517319|gb|AFK46721.1| unknown [Medicago truncatula]
Length = 373
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 44/63 (69%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNIVGD 181
++ R RR+KI+EKIR L+ L+P KMD ASMLD+AI Y+K LK Q++++ + +
Sbjct: 215 LSERKRRDKINEKIRALKELIPNCNKMDKASMLDDAIDYLKTLKLQLQIMSMGRALCMPL 274
Query: 182 DHY 184
+H+
Sbjct: 275 NHF 277
>gi|339778397|gb|AEK06080.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 20/106 (18%)
Query: 71 DQEEDEEP-----EEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAAR 125
D EE E P EE +GA K P + R + + +++ R
Sbjct: 287 DTEESEGPSEDAEEESVGAKK---------------PASARAGNGSKRGRAAEVHNLSER 331
Query: 126 HRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
RR++I+EK+R LQ L+P K+D ASMLDEAI Y+K L+ Q++++
Sbjct: 332 RRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIM 377
>gi|357511583|ref|XP_003626080.1| Transcription factor SPATULA [Medicago truncatula]
gi|355501095|gb|AES82298.1| Transcription factor SPATULA [Medicago truncatula]
Length = 373
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 39/50 (78%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR+KI+EKIR L+ L+P KMD ASMLD+AI Y+K LK Q++++
Sbjct: 215 LSERKRRDKINEKIRALKELIPNCNKMDKASMLDDAIDYLKTLKLQLQIM 264
>gi|449533331|ref|XP_004173629.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 456
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
Query: 103 TTIRKPKRRNIRI----SDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEA 157
+ ++KP ++R + D S+A R RREKISE+++ LQ LVPG K+ A MLDE
Sbjct: 239 SEVQKPDYIHVRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEI 298
Query: 158 IRYVKFLKRQIRLL 171
I YV+ L+RQ+ L
Sbjct: 299 INYVQSLQRQVEFL 312
>gi|339778387|gb|AEK06075.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 20/106 (18%)
Query: 71 DQEEDEEP-----EEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAAR 125
D EE E P EE +GA K P + R + + +++ R
Sbjct: 287 DTEESEGPSEDAEEESVGAKK---------------PASARAGNGSKRGRAAEVHNLSER 331
Query: 126 HRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
RR++I+EK+R LQ L+P K+D ASMLDEAI Y+K L+ Q++++
Sbjct: 332 RRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIM 377
>gi|449518045|ref|XP_004166054.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE++R+LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 353 SLAERVRREKISERMRLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 404
>gi|449463525|ref|XP_004149484.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE++R+LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 353 SLAERVRREKISERMRLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 404
>gi|222080621|gb|ACM41587.1| bHLH transcription factor MYC4 [Catharanthus roseus]
Length = 259
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 3/63 (4%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL--QSNQ 175
P+S+A R RR +IS++IR LQ LVP K +TA ML+EA+ YVKFL++QI+ L Q +
Sbjct: 193 PRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEQQKK 252
Query: 176 CNI 178
C
Sbjct: 253 CKC 255
>gi|222080623|gb|ACM41588.1| bHLH transcription factor MYC5 [Catharanthus roseus]
Length = 321
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 48/70 (68%), Gaps = 2/70 (2%)
Query: 102 PTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYV 161
PTT R P +R+ + + +++ + RR +I+EK++ LQ L+P K D ASMLDEAI Y+
Sbjct: 135 PTTSRNPSKRSR--AAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYL 192
Query: 162 KFLKRQIRLL 171
K L+ Q+++L
Sbjct: 193 KQLQLQVQML 202
>gi|388517565|gb|AFK46844.1| unknown [Medicago truncatula]
Length = 194
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 42/65 (64%), Gaps = 5/65 (7%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSNQ-- 175
P+S+A R RR +IS++IR LQ LVP K +TA MLDEA+ YVKFL+ QI L Q
Sbjct: 128 PRSIAERVRRTRISDRIRKLQELVPNMDKQTNTAEMLDEAVAYVKFLQNQIEELSEQQRR 187
Query: 176 --CNI 178
C I
Sbjct: 188 CKCTI 192
>gi|222623841|gb|EEE57973.1| hypothetical protein OsJ_08713 [Oryza sativa Japonica Group]
Length = 432
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 35/45 (77%)
Query: 127 RREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
RRE+I+E+++ LQ LVP K D ASMLDE I YVKFL+ Q+++L
Sbjct: 252 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 296
>gi|21539493|gb|AAM53299.1| unknown protein [Arabidopsis thaliana]
Length = 335
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ LQ LVPG K+ A MLDE I YV+ L+RQI L
Sbjct: 181 DSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFL 235
>gi|20127066|gb|AAM10952.1|AF488596_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 335
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ LQ LVPG K+ A MLDE I YV+ L+RQI L
Sbjct: 181 DSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFL 235
>gi|356575289|ref|XP_003555774.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 633
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 39/50 (78%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR++I+EK+R LQ L+P K+D ASMLDEAI Y+K L+ Q++++
Sbjct: 378 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIM 427
>gi|22329164|ref|NP_195179.2| transcription factor bHLH63 [Arabidopsis thaliana]
gi|75299602|sp|Q8GY61.1|BH063_ARATH RecName: Full=Transcription factor bHLH63; AltName: Full=Basic
helix-loop-helix protein 63; Short=AtbHLH63; Short=bHLH
63; AltName: Full=Transcription factor EN 84; AltName:
Full=bHLH transcription factor bHLH063
gi|26450757|dbj|BAC42487.1| putative bHLH transcription factor bHLH063 [Arabidopsis thaliana]
gi|28950907|gb|AAO63377.1| At4g34530 [Arabidopsis thaliana]
gi|332660989|gb|AEE86389.1| transcription factor bHLH63 [Arabidopsis thaliana]
Length = 335
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ LQ LVPG K+ A MLDE I YV+ L+RQI L
Sbjct: 181 DSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFL 235
>gi|222619489|gb|EEE55621.1| hypothetical protein OsJ_03959 [Oryza sativa Japonica Group]
Length = 166
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 36/41 (87%)
Query: 114 RISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASML 154
++S DPQSVAAR RR +IS++ R+L+ LVPGG+KMDTA+++
Sbjct: 12 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTAALV 52
>gi|125541459|gb|EAY87854.1| hypothetical protein OsI_09276 [Oryza sativa Indica Group]
Length = 431
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 35/45 (77%)
Query: 127 RREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
RRE+I+E+++ LQ LVP K D ASMLDE I YVKFL+ Q+++L
Sbjct: 251 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 295
>gi|3096922|emb|CAA18832.1| putative protein [Arabidopsis thaliana]
gi|7270403|emb|CAB80170.1| putative protein [Arabidopsis thaliana]
Length = 324
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ LQ LVPG K+ A MLDE I YV+ L+RQI L
Sbjct: 181 DSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFL 235
>gi|222635086|gb|EEE65218.1| hypothetical protein OsJ_20364 [Oryza sativa Japonica Group]
Length = 352
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 36/47 (76%)
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
R RRE+I+E+++ LQ LVP K D ASMLDE I YVKFL+ Q+++L
Sbjct: 152 RLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 198
>gi|297802514|ref|XP_002869141.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
gi|297314977|gb|EFH45400.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ LQ LVPG K+ A MLDE I YV+ L+RQI L
Sbjct: 178 DSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFL 232
>gi|414590533|tpg|DAA41104.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 367
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 95 MQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASM 153
+Q D P IR + + P+S+A R RR KISE+IR LQ LVP K +T+ M
Sbjct: 275 LQFQDAVPCKIRAKRG----CATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDM 330
Query: 154 LDEAIRYVKFLKRQIRLLQSNQCNIV 179
LD A+ Y+K L++Q+++L+ Q N
Sbjct: 331 LDLAVDYIKELQKQVKVLKETQANCT 356
>gi|255543699|ref|XP_002512912.1| conserved hypothetical protein [Ricinus communis]
gi|223547923|gb|EEF49415.1| conserved hypothetical protein [Ricinus communis]
Length = 444
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
Query: 103 TTIRKPKRRNIRI----SDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEA 157
T ++KP ++R + D S+A R RREKISE+++ LQ LVPG K+ A MLDE
Sbjct: 224 TEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEI 283
Query: 158 IRYVKFLKRQIRLL 171
I YV+ L+RQ+ L
Sbjct: 284 INYVQSLQRQVEFL 297
>gi|296089857|emb|CBI39676.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 39/50 (78%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR++I+EK+R LQ L+P K+D ASMLDEAI Y+K L+ Q++++
Sbjct: 333 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIM 382
>gi|255543048|ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
gi|223548548|gb|EEF50039.1| conserved hypothetical protein [Ricinus communis]
Length = 758
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 39/50 (78%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR++I+EK+R LQ L+P K+D ASMLDEAI Y+K L+ Q++++
Sbjct: 472 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIM 521
>gi|255587658|ref|XP_002534345.1| transcription factor, putative [Ricinus communis]
gi|223525454|gb|EEF28039.1| transcription factor, putative [Ricinus communis]
Length = 554
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
Query: 44 SRHIIQPSSSTLLFGDHNNNNNNNNIIDQEEDEEPEEELGAMKEMMYRIAAMQPVDIDPT 103
S+ QP+S+ D +N+N + +++ D + EEE + A+ +P +
Sbjct: 288 SKEAPQPNSAKDAEVD-DNSNAKRSKGNEKNDVKAEEEHKGNGDDKQNKASTKPPEPPKD 346
Query: 104 TIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVK 162
I RR + D S+A R RREKISE++++LQ LVPG K+ A MLDE I YV+
Sbjct: 347 YIHVRARRGQ--ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQ 404
Query: 163 FLKRQIRLL 171
L+RQ+ L
Sbjct: 405 SLQRQVEFL 413
>gi|357441953|ref|XP_003591254.1| Transcription factor PIF3 [Medicago truncatula]
gi|355480302|gb|AES61505.1| Transcription factor PIF3 [Medicago truncatula]
Length = 721
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 39/50 (78%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR++I+EK+R LQ L+P K+D ASMLDEAI Y+K L+ Q++++
Sbjct: 475 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQMM 524
>gi|308080388|ref|NP_001183599.1| uncharacterized protein LOC100502193 [Zea mays]
gi|238013326|gb|ACR37698.1| unknown [Zea mays]
gi|413951548|gb|AFW84197.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 480
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 59 DHNNNNNNNNIIDQEEDEEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDD 118
D ++ +NN + + + E G ++ + +A +P P + R +D
Sbjct: 231 DESSGAEDNNPTTKGKAAQSSSENGGGRKQQGKESATKPPAEAPKDYIHVRARRGEATDS 290
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKIS+++++LQ LVPG K + A MLDE I YV+ L+RQ+ L
Sbjct: 291 -HSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFL 343
>gi|47497022|dbj|BAD19075.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
gi|47497231|dbj|BAD19276.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
Length = 463
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 35/45 (77%)
Query: 127 RREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
RRE+I+E+++ LQ LVP K D ASMLDE I YVKFL+ Q+++L
Sbjct: 252 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 296
>gi|356534971|ref|XP_003536024.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 665
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 39/50 (78%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR++I+EK+R LQ L+P K+D ASMLDEAI Y+K L+ Q++++
Sbjct: 442 LSERKRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIM 491
>gi|356501827|ref|XP_003519725.1| PREDICTED: uncharacterized protein LOC100783804 [Glycine max]
Length = 852
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 60/101 (59%), Gaps = 18/101 (17%)
Query: 70 IDQEEDEEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRRE 129
+ QE DEEPE+ +KE R + T +++ RN ++ ++ R RR+
Sbjct: 724 VTQENDEEPED---VVKEKPAR---------EGTGVKRS--RNAQV----HNLCERKRRD 765
Query: 130 KISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRL 170
KI++++RIL+ L+P K D ASMLD+AI Y+K LK QI++
Sbjct: 766 KINKRMRILKELIPNCNKTDKASMLDDAIEYLKTLKLQIQV 806
>gi|449454115|ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
gi|449522990|ref|XP_004168508.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
Length = 696
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 39/50 (78%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR++I+EK+R LQ L+P K+D ASMLDEAI Y+K L+ Q++++
Sbjct: 469 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIM 518
>gi|359487706|ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
Length = 752
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 39/50 (78%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR++I+EK+R LQ L+P K+D ASMLDEAI Y+K L+ Q++++
Sbjct: 469 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIM 518
>gi|357513299|ref|XP_003626938.1| BHLH transcription factor [Medicago truncatula]
gi|355520960|gb|AET01414.1| BHLH transcription factor [Medicago truncatula]
Length = 498
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE++++LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 300 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 354
>gi|147770956|emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
Length = 627
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 39/50 (78%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR++I+EK+R LQ L+P K+D ASMLDEAI Y+K L+ Q++++
Sbjct: 454 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIM 503
>gi|115456009|ref|NP_001051605.1| Os03g0802900 [Oryza sativa Japonica Group]
gi|29150361|gb|AAO72370.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711612|gb|ABF99407.1| bHLH transcription factor, putative, expressed [Oryza sativa
Japonica Group]
gi|113550076|dbj|BAF13519.1| Os03g0802900 [Oryza sativa Japonica Group]
Length = 265
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ILQ LVPG K + AS+LDE I Y++ L+RQ+ L
Sbjct: 145 DSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFL 199
>gi|323388909|gb|ADX60259.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 265
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ILQ LVPG K + AS+LDE I Y++ L+RQ+ L
Sbjct: 145 DSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFL 199
>gi|125546085|gb|EAY92224.1| hypothetical protein OsI_13945 [Oryza sativa Indica Group]
Length = 263
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ILQ LVPG K + AS+LDE I Y++ L+RQ+ L
Sbjct: 143 DSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFL 197
>gi|388499536|gb|AFK37834.1| unknown [Lotus japonicus]
Length = 493
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE++++LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 299 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVRSLQRQVEFL 353
>gi|356558973|ref|XP_003547776.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 548
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE++++LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 348 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 402
>gi|356527316|ref|XP_003532257.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 586
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE++++LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 395 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 449
>gi|296086467|emb|CBI32056.3| unnamed protein product [Vitis vinifera]
Length = 208
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 7/83 (8%)
Query: 96 QPVDIDPTTIRKPKRRNIRI------SDDPQSVAARHRREKISEKIRILQRLVPGGTK-M 148
+PV+ +P + PK+ I + + D S+A R RREKISE+++ILQ LVPG K +
Sbjct: 63 KPVEQNPQSADPPKQDFIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 122
Query: 149 DTASMLDEAIRYVKFLKRQIRLL 171
A +LDE I Y++ L+RQ+ L
Sbjct: 123 GKALVLDEIINYIQSLQRQVEFL 145
>gi|356507384|ref|XP_003522447.1| PREDICTED: transcription factor bHLH137-like [Glycine max]
Length = 334
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE++++LQRLVPG K+ A MLDE I YV+ L+ Q+ L
Sbjct: 156 DSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFL 210
>gi|168024155|ref|XP_001764602.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684180|gb|EDQ70584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 801
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 36/47 (76%)
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
R RR++I+EK+R LQ L+P K D ASMLDEAI Y+K L+ Q++++
Sbjct: 605 RRRRDRINEKMRALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQMM 651
>gi|356538777|ref|XP_003537877.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 420
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 5/71 (7%)
Query: 106 RKPKRRNIRI----SDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRY 160
+KP+ ++R + D S+A R RREKISE+++ LQ LVPG K+ A MLDE I Y
Sbjct: 204 QKPEYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVAGKAGMLDEIINY 263
Query: 161 VKFLKRQIRLL 171
V+ L+RQ+ L
Sbjct: 264 VQSLQRQVEFL 274
>gi|242037067|ref|XP_002465928.1| hypothetical protein SORBIDRAFT_01g048400 [Sorghum bicolor]
gi|241919782|gb|EER92926.1| hypothetical protein SORBIDRAFT_01g048400 [Sorghum bicolor]
Length = 287
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%)
Query: 120 QSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
Q AAR RR++ISEK L RL+PG K++TA ML+EA R+VK L+ Q+ +L
Sbjct: 155 QKSAARQRRKRISEKTAELARLIPGAHKLNTAEMLEEAARHVKLLQAQVGVL 206
>gi|102139897|gb|ABF70046.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 278
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RRE+ISE+++ LQ LVPG +K M AS LDE I YV+ L+RQ+ L
Sbjct: 141 DSHSLAERVRRERISERMKYLQELVPGCSKIMGKASTLDEIINYVQSLQRQVEFL 195
>gi|356503048|ref|XP_003520324.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 582
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE++++LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 381 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 435
>gi|15217533|ref|NP_172424.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|30681206|ref|NP_849626.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|20532207|sp|O80536.1|PIF3_ARATH RecName: Full=Transcription factor PIF3; AltName: Full=Basic
helix-loop-helix protein 8; Short=AtbHLH8; Short=bHLH 8;
AltName: Full=Phytochrome-associated protein 3; AltName:
Full=Phytochrome-interacting factor 3; AltName:
Full=Transcription factor EN 100; AltName: Full=bHLH
transcription factor bHLH008
gi|18026964|gb|AAL55715.1|AF251693_1 putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|3482928|gb|AAC33213.1| Unknown protein [Arabidopsis thaliana]
gi|3929586|gb|AAC95156.1| phytochrome interacting factor 3 [Arabidopsis thaliana]
gi|26449609|dbj|BAC41930.1| putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|332190336|gb|AEE28457.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|332190337|gb|AEE28458.1| transcription factor PIF3 [Arabidopsis thaliana]
Length = 524
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 39/50 (78%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR++I+EK+R LQ L+P K+D ASMLDEAI Y+K L+ Q++++
Sbjct: 350 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIM 399
>gi|225428454|ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like [Vitis vinifera]
Length = 456
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 46/72 (63%), Gaps = 5/72 (6%)
Query: 105 IRKPKRRNIRI----SDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIR 159
++KP ++R + D S+A R RREKISE+++ LQ LVPG K+ A MLDE I
Sbjct: 248 VQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIIN 307
Query: 160 YVKFLKRQIRLL 171
YV+ L+RQ+ L
Sbjct: 308 YVQSLQRQVEFL 319
>gi|4093153|gb|AAC99771.1| phytochrome-associated protein 3 [Arabidopsis thaliana]
Length = 524
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 39/50 (78%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR++I+EK+R LQ L+P K+D ASMLDEAI Y+K L+ Q++++
Sbjct: 350 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIM 399
>gi|125588289|gb|EAZ28953.1| hypothetical protein OsJ_12999 [Oryza sativa Japonica Group]
Length = 224
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ILQ LVPG K + AS+LDE I Y++ L+RQ+ L
Sbjct: 104 DSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFL 158
>gi|224069890|ref|XP_002303073.1| predicted protein [Populus trichocarpa]
gi|222844799|gb|EEE82346.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE++++LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 367 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 421
>gi|356563476|ref|XP_003549988.1| PREDICTED: transcription factor bHLH25-like [Glycine max]
Length = 341
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 37/51 (72%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
+A R RREKIS+K+ L L+P KMD S+L EAIRYVK LK Q+++L+
Sbjct: 158 IAERMRREKISQKLIALSALIPDLKKMDKVSVLGEAIRYVKQLKEQVKVLE 208
>gi|224069945|ref|XP_002303090.1| predicted protein [Populus trichocarpa]
gi|222844816|gb|EEE82363.1| predicted protein [Populus trichocarpa]
Length = 615
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNIV 179
++ R RR++I+EK+R LQ L+P K D ASMLDEAI Y+K L+ Q++++ S C++V
Sbjct: 374 LSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM-SMGCSMV 430
>gi|409109458|gb|AFV13868.1| indehiscent-like protein IND, partial [Erucaria erucarioides]
Length = 54
Score = 60.1 bits (144), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/31 (87%), Positives = 29/31 (93%)
Query: 142 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
VPGG KMDTASMLDEAIRY KFLKRQ+RLL+
Sbjct: 1 VPGGAKMDTASMLDEAIRYTKFLKRQVRLLE 31
>gi|356566230|ref|XP_003551337.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 585
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE++++LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 394 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 448
>gi|255565242|ref|XP_002523613.1| conserved hypothetical protein [Ricinus communis]
gi|223537175|gb|EEF38808.1| conserved hypothetical protein [Ricinus communis]
Length = 406
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 11/104 (10%)
Query: 68 NIIDQEEDEEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHR 127
N D E D E EE L A+ E + AA P + K R + + +++ + R
Sbjct: 125 NETDHECDCESEEGLEALIEEVQTKAA------PPRSSSKRSR-----AAEVHNLSEKRR 173
Query: 128 REKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
R +I+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q+++L
Sbjct: 174 RSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 217
>gi|414877117|tpg|DAA54248.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 567
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 39/50 (78%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR++I+EK+R LQ L+P K+D ASMLDEAI Y+K L+ Q++++
Sbjct: 359 LSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 408
>gi|357437785|ref|XP_003589168.1| Transcription factor SPATULA [Medicago truncatula]
gi|355478216|gb|AES59419.1| Transcription factor SPATULA [Medicago truncatula]
Length = 287
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ + RR KI+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q+++L
Sbjct: 98 LSEKRRRSKINEKLKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 147
>gi|297843750|ref|XP_002889756.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
gi|297335598|gb|EFH66015.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
Length = 522
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 39/50 (78%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR++I+EK+R LQ L+P K+D ASMLDEAI Y+K L+ Q++++
Sbjct: 348 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIM 397
>gi|255560265|ref|XP_002521150.1| Phytochrome-interacting factor, putative [Ricinus communis]
gi|223539719|gb|EEF41301.1| Phytochrome-interacting factor, putative [Ricinus communis]
Length = 572
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNIV 179
++ R RR++I+EK+R LQ L+P K D ASMLDEAI Y+K L+ Q++++ S C++V
Sbjct: 367 LSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM-SMGCSMV 423
>gi|219363183|ref|NP_001136483.1| uncharacterized protein LOC100216597 [Zea mays]
gi|194695886|gb|ACF82027.1| unknown [Zea mays]
gi|413920793|gb|AFW60725.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 469
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 13/94 (13%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSNQC 176
D S+A R RREKI E++++LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 265 DSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLS 324
Query: 177 NI------------VGDDHYNKLSLGATTNTTIA 198
+ V D NK+ AT++ ++A
Sbjct: 325 TVNPRLELGADDSFVPRDDANKMCAAATSSISMA 358
>gi|295913405|gb|ADG57955.1| transcription factor [Lycoris longituba]
Length = 186
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ILQ LVPG K + AS+LDE I Y++ L+RQ+ L
Sbjct: 68 DSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFL 122
>gi|357128032|ref|XP_003565680.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor PIF3-like
[Brachypodium distachyon]
Length = 614
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 39/50 (78%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR++I+EK+R LQ L+P K+D ASMLDEAI Y+K L+ Q++++
Sbjct: 412 LSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 461
>gi|290767978|gb|ADD60686.1| putative TA1 protein [Oryza australiensis]
Length = 436
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE+++ LQ LVPG TK+ A MLDE I YV+ L+RQ+ L
Sbjct: 271 SLAERVRREKISERMKYLQNLVPGCTKVTGKAVMLDEIINYVQSLQRQVEFL 322
>gi|15231450|ref|NP_187390.1| transcription factor bHLH62 [Arabidopsis thaliana]
gi|75313804|sp|Q9SRT2.1|BH062_ARATH RecName: Full=Transcription factor bHLH62; AltName: Full=Basic
helix-loop-helix protein 62; Short=AtbHLH62; Short=bHLH
62; AltName: Full=Transcription factor EN 85; AltName:
Full=bHLH transcription factor bHLH062
gi|6041855|gb|AAF02164.1|AC009853_24 unknown protein [Arabidopsis thaliana]
gi|51968880|dbj|BAD43132.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51969134|dbj|BAD43259.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|111074462|gb|ABH04604.1| At3g07340 [Arabidopsis thaliana]
gi|332641009|gb|AEE74530.1| transcription factor bHLH62 [Arabidopsis thaliana]
Length = 456
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE++++LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 267 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 321
>gi|414864593|tpg|DAA43150.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 290
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%)
Query: 120 QSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
Q+ AAR RR++ISEK L RL+PG K++TA ML+EA R+VK L+ Q+ +L
Sbjct: 159 QNSAARQRRKRISEKTAELARLIPGANKLNTAEMLEEASRHVKLLQAQVGML 210
>gi|297803176|ref|XP_002869472.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
gi|297315308|gb|EFH45731.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
Length = 1780
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 93 AAMQPVDIDPTTI---------RKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVP 143
A +PV I P TI R R + + ++A R RREKI+E I+ LQ L+P
Sbjct: 553 AETEPVQIQPATIVEIQGTEEARGSMSRKRSRTAEMHNLAERRRREKINENIKTLQELIP 612
Query: 144 GGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
K S LD+AI YVK+L+ QI+++ + Q
Sbjct: 613 RCNKSTKVSTLDDAIEYVKWLQSQIQMMSTGQ 644
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
+A R RREKI+EK++ LQ L+P K S LD AI YVK+L+ QI+++ Q
Sbjct: 145 LAERRRREKINEKMKTLQELIPRCNKSTKVSTLDAAIEYVKWLQSQIQMILMGQ 198
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
+A R RREKI+EK++ LQ L+P K S L++ I Y+K L+ QI+++
Sbjct: 1149 LAERRRREKINEKMKTLQELIPRCNKSTKVSTLEDVIEYMKSLQMQIQMM 1198
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIR 169
+A R RREKI+EK++ LQ L+P K S L++ I YVK L+ QI+
Sbjct: 1579 LAERRRREKINEKMKTLQELIPRCNKSTKVSTLEDVIEYVKSLEMQIQ 1626
>gi|297833524|ref|XP_002884644.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330484|gb|EFH60903.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 456
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE++++LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 267 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 321
>gi|20127064|gb|AAM10951.1|AF488595_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 450
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE++++LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 261 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 315
>gi|51971323|dbj|BAD44326.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51971523|dbj|BAD44426.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
Length = 456
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE++++LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 267 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 321
>gi|295913657|gb|ADG58071.1| transcription factor [Lycoris longituba]
Length = 258
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE++ ILQ LVPG K + AS+LDE I Y++ L+RQ+ L
Sbjct: 140 DSHSLAERARREKISERMNILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFL 194
>gi|449447621|ref|XP_004141566.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
gi|449522500|ref|XP_004168264.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
Length = 244
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSNQ 175
P+S+A R RR +IS++IR LQ +VP K +TA ML+EA+ YVKFL++QI+ L +Q
Sbjct: 178 PRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQ 235
>gi|414877115|tpg|DAA54246.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 377
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 39/50 (78%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR++I+EK+R LQ L+P K+D ASMLDEAI Y+K L+ Q++++
Sbjct: 169 LSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 218
>gi|226509284|ref|NP_001148741.1| DNA binding protein [Zea mays]
gi|195621758|gb|ACG32709.1| DNA binding protein [Zea mays]
gi|414887073|tpg|DAA63087.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414887074|tpg|DAA63088.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 374
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 5/86 (5%)
Query: 95 MQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASM 153
+Q D P IR + + P+S+A R RR KISE+IR LQ LVP K +T+ M
Sbjct: 282 LQFQDAVPCKIRAKRG----CATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDM 337
Query: 154 LDEAIRYVKFLKRQIRLLQSNQCNIV 179
LD A+ Y+K L++Q+++L+ +Q N
Sbjct: 338 LDLAVDYIKDLQKQVKVLKESQDNCT 363
>gi|255540091|ref|XP_002511110.1| DNA binding protein, putative [Ricinus communis]
gi|223550225|gb|EEF51712.1| DNA binding protein, putative [Ricinus communis]
Length = 422
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ILQRLVPG K+ A MLDE I YV+ L+ Q+ L
Sbjct: 181 DSHSLAERVRREKISERMKILQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFL 235
>gi|356516503|ref|XP_003526933.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 320
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE++++LQRLVPG K+ A MLDE I YV+ L+ Q+ L
Sbjct: 173 DSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFL 227
>gi|297809111|ref|XP_002872439.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297318276|gb|EFH48698.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%), Gaps = 3/64 (4%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSNQ-- 175
P+S+A R RR +IS++IR LQ LVP K +TA ML+EA+ YVK L+RQI+ L Q
Sbjct: 196 PRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQELTEEQKR 255
Query: 176 CNIV 179
C +
Sbjct: 256 CTCI 259
>gi|15233768|ref|NP_192657.1| transcription factor bHLH81 [Arabidopsis thaliana]
gi|75311758|sp|Q9M0R0.1|BH081_ARATH RecName: Full=Transcription factor bHLH81; AltName: Full=Basic
helix-loop-helix protein 81; Short=AtbHLH81; Short=bHLH
81; AltName: Full=Transcription factor EN 72; AltName:
Full=bHLH transcription factor bHLH081
gi|7267561|emb|CAB78042.1| putative protein [Arabidopsis thaliana]
gi|34146832|gb|AAQ62424.1| At4g09180 [Arabidopsis thaliana]
gi|110741264|dbj|BAF02182.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332657332|gb|AEE82732.1| transcription factor bHLH81 [Arabidopsis thaliana]
Length = 262
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%), Gaps = 3/64 (4%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSNQ-- 175
P+S+A R RR +IS++IR LQ LVP K +TA ML+EA+ YVK L+RQI+ L Q
Sbjct: 194 PRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQELTEEQKR 253
Query: 176 CNIV 179
C +
Sbjct: 254 CTCI 257
>gi|449437603|ref|XP_004136581.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449522885|ref|XP_004168456.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 366
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 95 MQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASM 153
+Q D P IR + + P+S+A R RR +ISE++R LQ LVP K +TA M
Sbjct: 272 LQLQDAVPCRIRAKRG----CATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTADM 327
Query: 154 LDEAIRYVKFLKRQIRLLQSNQCNIV 179
LD A+ Y+K L++Q + L N+ N V
Sbjct: 328 LDLAVDYIKELQKQFKTLSDNRANCV 353
>gi|242082417|ref|XP_002445977.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
gi|241942327|gb|EES15472.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
Length = 343
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE++++LQ LVPG TK+ A MLDE I YV+ L+RQ+ L
Sbjct: 186 SLAERLRREKISERMKLLQDLVPGCTKVTGKAVMLDEIINYVQSLQRQVEFL 237
>gi|297744394|emb|CBI37656.3| unnamed protein product [Vitis vinifera]
Length = 345
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 46/72 (63%), Gaps = 5/72 (6%)
Query: 105 IRKPKRRNIRI----SDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIR 159
++KP ++R + D S+A R RREKISE+++ LQ LVPG K+ A MLDE I
Sbjct: 137 VQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIIN 196
Query: 160 YVKFLKRQIRLL 171
YV+ L+RQ+ L
Sbjct: 197 YVQSLQRQVEFL 208
>gi|225458914|ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Vitis vinifera]
gi|302142156|emb|CBI19359.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE++R+LQ LVPG K+ A MLDE I YV+ L++Q+ L
Sbjct: 277 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 328
>gi|224081861|ref|XP_002306505.1| predicted protein [Populus trichocarpa]
gi|222855954|gb|EEE93501.1| predicted protein [Populus trichocarpa]
Length = 407
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 61/110 (55%), Gaps = 9/110 (8%)
Query: 70 IDQEEDEEPEE-ELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRI------SDDPQSV 122
I +E DE+ ++ E + + A Q D +P + PK I + + + S+
Sbjct: 195 IAKELDEKKQKIEQNCSANLRGKQVAKQAKD-NPQSGEAPKDDYIHVRARRGQATNSHSL 253
Query: 123 AARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
A R RREKISE++R+LQ LVPG K+ A MLDE I YV+ L++Q+ L
Sbjct: 254 AERVRREKISERMRMLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 303
>gi|255550670|ref|XP_002516384.1| transcription factor, putative [Ricinus communis]
gi|223544482|gb|EEF46001.1| transcription factor, putative [Ricinus communis]
Length = 534
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 355 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 409
>gi|356577684|ref|XP_003556954.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 435
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE++R+LQ LVPG K+ A MLDE I YV+ L++Q+ L
Sbjct: 281 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 332
>gi|255537964|ref|XP_002510047.1| DNA binding protein, putative [Ricinus communis]
gi|223550748|gb|EEF52234.1| DNA binding protein, putative [Ricinus communis]
Length = 408
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE++R+LQ LVPG K+ A MLDE I YV+ L++Q+ L
Sbjct: 254 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 305
>gi|115479723|ref|NP_001063455.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|50726625|dbj|BAD34345.1| TA1 protein-like [Oryza sativa Japonica Group]
gi|113631688|dbj|BAF25369.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|215768249|dbj|BAH00478.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388941|gb|ADX60275.1| bHLH- transcription factor [Oryza sativa Japonica Group]
Length = 428
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE++++LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 260 SLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 311
>gi|148906813|gb|ABR16552.1| unknown [Picea sitchensis]
Length = 605
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 413 DSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 467
>gi|218202318|gb|EEC84745.1| hypothetical protein OsI_31742 [Oryza sativa Indica Group]
Length = 428
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE++++LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 260 SLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 311
>gi|224137946|ref|XP_002322691.1| predicted protein [Populus trichocarpa]
gi|222867321|gb|EEF04452.1| predicted protein [Populus trichocarpa]
Length = 291
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMD-TASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKI++++++LQ LVPG K+ TA +LDE I +V+FL+RQ+ +L
Sbjct: 191 DSHSLAERARREKINQRMKLLQELVPGCNKISGTALVLDEIINHVQFLQRQVEIL 245
>gi|356511998|ref|XP_003524708.1| PREDICTED: transcription factor bHLH25-like [Glycine max]
Length = 336
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 36/51 (70%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
+A R RREKIS++ L L+P KMD S+L EAIRYVK LK Q++LL+
Sbjct: 152 IAERMRREKISQQFIALSALIPDLKKMDKVSLLGEAIRYVKQLKEQVKLLE 202
>gi|359480088|ref|XP_002263397.2| PREDICTED: transcription factor PIF1-like [Vitis vinifera]
Length = 517
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNIV 179
++ R RR++I+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q++++ S C++V
Sbjct: 315 LSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM-SMGCSMV 371
>gi|312282767|dbj|BAJ34249.1| unnamed protein product [Thellungiella halophila]
Length = 363
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 95 MQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASM 153
MQ D P +R + + P+S+A R RR +ISE++R LQ LVP K +T+ M
Sbjct: 275 MQLQDSVPCKVRAKRG----CATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDM 330
Query: 154 LDEAIRYVKFLKRQIRLLQSNQCNI 178
LD A+ Y+K L+RQ ++L N+ N
Sbjct: 331 LDLAVDYIKDLQRQYKILNDNRANC 355
>gi|413924221|gb|AFW64153.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 230
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 37/51 (72%)
Query: 127 RREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
RRE+I+E+++ LQ LVP K D ASMLDE I YVKFL+ Q+++L ++
Sbjct: 142 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLG 192
>gi|326528369|dbj|BAJ93366.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 19/115 (16%)
Query: 61 NNNNNNNNIIDQEEDEEPEEELGAMKEMMYRIAAMQPVDIDP----TTIRKPKRRNIRIS 116
N ++ +D E+ E P E+ A E + +D P TT R+ + +
Sbjct: 272 NRSSKRKRGLDTEDSESPSED--AESESLA-------LDRKPPQKLTTARRSRAAEV--- 319
Query: 117 DDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
+++ R RR++I+EK+R LQ L+P K D ASMLDEAI Y+K L+ Q++++
Sbjct: 320 ---HNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKTLQMQVQMM 371
>gi|449437607|ref|XP_004136583.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
gi|449501894|ref|XP_004161487.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
Length = 369
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 5/108 (4%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMD-TASMLDEAIRYVKFLKRQIRLLQSNQC 176
D S+A R RREKI+ ++++LQ LVPG K+ TA +LDE I +V+ L+RQ+ L
Sbjct: 210 DSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQVEFLSMRLA 269
Query: 177 NIVGDDHYNKLSLGATTNTTIATTTASASAAGALDPILGHSLPFHGNR 224
+ +N S+ AT N I ++ + P++ +P +G R
Sbjct: 270 AVNPRVDFNIESILATENEPI----LESNFPTMVSPLMWPEIPVNGTR 313
>gi|449515805|ref|XP_004164938.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 549
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNIV 179
++ R RR++I+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q++++ S C +V
Sbjct: 308 LSERRRRDRINEKMKALQELIPRCNKADKASMLDEAIEYLKTLQLQVQMM-SMGCGMV 364
>gi|357124540|ref|XP_003563957.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 441
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE+++ LQ LVPG +K + A MLDE I YV+ L+RQ+ L
Sbjct: 275 SLAERVRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQVEFL 326
>gi|449468728|ref|XP_004152073.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 553
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNIV 179
++ R RR++I+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q++++ S C +V
Sbjct: 312 LSERRRRDRINEKMKALQELIPRCNKADKASMLDEAIEYLKTLQLQVQMM-SMGCGMV 368
>gi|297744279|emb|CBI37249.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNIV 179
++ R RR++I+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q++++ S C++V
Sbjct: 277 LSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM-SMGCSMV 333
>gi|357115005|ref|XP_003559284.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 243
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKI+E+++ILQ LVPG K + AS+LDE I YV+ L+RQ+ L
Sbjct: 123 DSHSLAERARREKITERMKILQDLVPGCNKVIGKASVLDEIINYVQALERQVEFL 177
>gi|356504821|ref|XP_003521193.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 372
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 5/108 (4%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMD-TASMLDEAIRYVKFLKRQIRLLQSNQC 176
D S+A R RREKI+ ++++LQ LVPG K+ TA +LDE I +V+ L+RQ+ +L
Sbjct: 215 DSHSLAERARREKINARMKLLQELVPGCDKISGTAMVLDEIINHVQSLQRQVEILSMKLA 274
Query: 177 NIVGDDHYNKLSLGATTNTTIATTTASASAAGALDPILGHSLPFHGNR 224
+ ++ SL AT ++ + + P++ +P +GNR
Sbjct: 275 AVNPRIDFSLDSLLATDGASLMDNNLPS----MVTPLMWPEIPLNGNR 318
>gi|449509268|ref|XP_004163540.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 402
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
Query: 72 QEEDEEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRI------SDDPQSVAAR 125
+E++ E E+ LG + Q + + PK I + + + S+A R
Sbjct: 191 EEKNAEMEQNLGGNSR--GKSTGKQTKEKSSNSAEAPKENYIHVRARRGQATNSHSLAER 248
Query: 126 HRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
RREKISE++R+LQ LVPG K+ A MLDE I YV+ L++Q+ L
Sbjct: 249 VRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 295
>gi|6166283|gb|AAF04760.1|AF103808_1 helix-loop-helix protein 1A [Pinus taeda]
Length = 551
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTK--MDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
P+S+A R RR +ISE++R LQ LVP K ++ A MLDEA+ YVK L++Q++ L N+
Sbjct: 478 PRSIAERVRRTRISERMRKLQELVPNSDKQTVNIADMLDEAVEYVKSLQKQVQELAENR 536
>gi|356517054|ref|XP_003527205.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 384
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 194 DSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQVEFL 248
>gi|302763871|ref|XP_002965357.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
gi|300167590|gb|EFJ34195.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
Length = 730
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 382 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 436
>gi|255548227|ref|XP_002515170.1| hypothetical protein RCOM_1343120 [Ricinus communis]
gi|223545650|gb|EEF47154.1| hypothetical protein RCOM_1343120 [Ricinus communis]
Length = 584
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
Query: 108 PKRRNIRISDDPQ--SVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
PK + + PQ S++ R RR+KI++K+R LQ L+P K+D ASMLD+AI Y+K L+
Sbjct: 371 PKSTSTKKKRIPQVHSLSERKRRDKINKKMRALQALIPNSDKVDKASMLDKAIEYLKTLQ 430
Query: 166 RQIRLL 171
Q++++
Sbjct: 431 LQLQMM 436
>gi|147786897|emb|CAN73299.1| hypothetical protein VITISV_005183 [Vitis vinifera]
Length = 569
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 381 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 435
>gi|449434704|ref|XP_004135136.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 561
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE+++ LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 381 SLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 432
>gi|242045042|ref|XP_002460392.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
gi|241923769|gb|EER96913.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
Length = 438
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE++++LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 268 SLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 319
>gi|193848525|gb|ACF22714.1| putative TA1 protein [Brachypodium distachyon]
Length = 428
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE+++ LQ LVPG +K + A MLDE I YV+ L+RQ+ L
Sbjct: 275 SLAERVRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQVEFL 326
>gi|359477937|ref|XP_002264969.2| PREDICTED: transcription factor bHLH62-like [Vitis vinifera]
Length = 569
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 381 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 435
>gi|413938470|gb|AFW73021.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 340
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RRE+ISE++R LQ LVPG +K+ A MLDE I YV+ L++Q+ L
Sbjct: 155 DSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFL 209
>gi|224029073|gb|ACN33612.1| unknown [Zea mays]
gi|413938471|gb|AFW73022.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RRE+ISE++R LQ LVPG +K+ A MLDE I YV+ L++Q+ L
Sbjct: 155 DSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFL 209
>gi|224081688|ref|XP_002306475.1| predicted protein [Populus trichocarpa]
gi|222855924|gb|EEE93471.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 17/116 (14%)
Query: 66 NNNIIDQEEDEEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAAR 125
+ N D E D E EE L A+ + M + P R KR + + +++ +
Sbjct: 101 SENETDHECDCESEEGLEALIDEM---------SVKPAPPRSSKRTR---AAEVHNLSEK 148
Query: 126 HRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQ-----IRLLQSNQC 176
RR +I+EK++ LQ L+P +K D ASMLDEAI Y+K L+ Q +R L+ +C
Sbjct: 149 RRRSRINEKMKALQNLIPNSSKTDKASMLDEAIEYLKLLQLQVQGLSVRFLEIYRC 204
>gi|125664136|gb|ABN51065.1| basic helix-loop-helix protein [Sesamum indicum]
Length = 400
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSNQCNIV 179
S+A R RRE+ISE++R+LQ LVPG K+ A MLDE I YV+ L++Q+ L +
Sbjct: 246 SLAERVRRERISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATV- 304
Query: 180 GDDHYNKLSLGATTNTTIATTTASASAAGALDPILGHSLPFHG 222
+ N + + + I + S + A + P L S PF G
Sbjct: 305 -NPELN-VDIERLLSKDILHSRGSNATALGIGPGLSSSHPFQG 345
>gi|224128880|ref|XP_002320444.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
gi|222861217|gb|EEE98759.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
Length = 568
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 378 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 432
>gi|414885894|tpg|DAA61908.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 434
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE++++LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 265 SLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 316
>gi|326521466|dbj|BAK00309.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 440
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE+++ LQ LVPG +K + A MLDE I YV+ L+RQ+ L
Sbjct: 277 SLAERVRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQVEFL 328
>gi|449493518|ref|XP_004159328.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 517
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE+++ LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 337 SLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 388
>gi|357158920|ref|XP_003578282.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 415
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE++++LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 253 SLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 304
>gi|312281887|dbj|BAJ33809.1| unnamed protein product [Thellungiella halophila]
Length = 304
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 105 IRKPKRRNIRI----SDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIR 159
I+KP ++R + D S+A R RREKIS+K++ LQ +VPG TK+ A MLDE I
Sbjct: 133 IQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCTKVTGKAGMLDEIIN 192
Query: 160 YVKFLKRQIRLL 171
YV+ L++Q+ L
Sbjct: 193 YVQSLQQQVEFL 204
>gi|223702402|gb|ACN21632.1| putative basic helix-loop-helix protein BHLH7 [Lotus japonicus]
Length = 340
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 176 DSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFL 230
>gi|356505096|ref|XP_003521328.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 517
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNIV 179
++ R RR++I+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q++++ S C +V
Sbjct: 315 LSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAISYLKSLQLQVQMM-SMGCGMV 371
>gi|356536868|ref|XP_003536955.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 491
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNIV 179
++ R RR++I+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q++++ S C +V
Sbjct: 283 LSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM-SMGCGMV 339
>gi|115477012|ref|NP_001062102.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|42408258|dbj|BAD09414.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113624071|dbj|BAF24016.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|125561978|gb|EAZ07426.1| hypothetical protein OsI_29678 [Oryza sativa Indica Group]
gi|125603820|gb|EAZ43145.1| hypothetical protein OsJ_27735 [Oryza sativa Japonica Group]
Length = 365
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE++++LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 188 SLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEIINYVQSLQRQVEFL 239
>gi|357473295|ref|XP_003606932.1| BHLH transcription factor [Medicago truncatula]
gi|355507987|gb|AES89129.1| BHLH transcription factor [Medicago truncatula]
Length = 344
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 152 DSHSLAERVRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFL 206
>gi|357129887|ref|XP_003566591.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 448
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 38/49 (77%)
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
R RR++I+EK+R LQ L+P K+D ASML+EAI Y+K L+ Q++++ S
Sbjct: 279 RRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMSS 327
>gi|225430730|ref|XP_002266502.1| PREDICTED: transcription factor bHLH64-like [Vitis vinifera]
Length = 362
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKIS+K++ LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 199 DSHSLAERARREKISKKMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFL 253
>gi|124360931|gb|ABN08903.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 484
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 8/77 (10%)
Query: 110 RRNIRISDDPQSVAA-------RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVK 162
++NI S +S AA R RR++I+EK++ LQ L+P K D ASMLDEAI Y+K
Sbjct: 246 KKNISGSSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNKSDKASMLDEAIDYLK 305
Query: 163 FLKRQIRLLQSNQCNIV 179
L+ Q++++ S C +V
Sbjct: 306 SLQLQVQMM-SMGCGMV 321
>gi|222641764|gb|EEE69896.1| hypothetical protein OsJ_29731 [Oryza sativa Japonica Group]
Length = 809
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE++++LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 641 SLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 692
>gi|298205236|emb|CBI17295.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 272 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 326
>gi|363808336|ref|NP_001242250.1| transcription factor bHLH48-like [Glycine max]
gi|256002927|gb|ACU52707.1| bHLH transcription factor PTF1 [Glycine max]
Length = 366
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 5/108 (4%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMD-TASMLDEAIRYVKFLKRQIRLLQSNQC 176
D S+A R RREKI+ ++++LQ LVPG K+ TA +LDE I +V+ L+RQ+ +L
Sbjct: 209 DSHSLAERARREKINARMKLLQELVPGCDKISGTAMVLDEIINHVQSLQRQVEILSMKLA 268
Query: 177 NIVGDDHYNKLSLGATTNTTIATTTASASAAGALDPILGHSLPFHGNR 224
+ ++ SL AT ++ + + P++ +P +GNR
Sbjct: 269 AVNPRIDFSLDSLLATDGASLMDNNLPS----MVTPLMWPEIPLNGNR 312
>gi|388503848|gb|AFK39990.1| unknown [Lotus japonicus]
Length = 248
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 7/77 (9%)
Query: 102 PTTIRKPKRRNIRI------SDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASML 154
P+ PK+ I + + D S+A R RREKISE+++ILQ LVPG KM A +L
Sbjct: 106 PSESEPPKQDYIHVRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVL 165
Query: 155 DEAIRYVKFLKRQIRLL 171
DE I Y++ L+ Q+ L
Sbjct: 166 DEIINYIQSLQHQVEFL 182
>gi|297735141|emb|CBI17503.3| unnamed protein product [Vitis vinifera]
Length = 366
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKIS+K++ LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 199 DSHSLAERARREKISKKMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFL 253
>gi|242086827|ref|XP_002439246.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
gi|241944531|gb|EES17676.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
Length = 480
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 98 VDIDPTTIRKPKRRNIRISDDPQ--SVAARHRREKISEKIRILQRLVPGGTKMDTASMLD 155
+D +P R+ R+ + S + +++ R RR++I+EK+R LQ L+P K+D ASML+
Sbjct: 242 MDDEPGATRRSAARSAKRSRTAEVHNMSERRRRDRINEKMRALQELIPNCNKIDKASMLE 301
Query: 156 EAIRYVKFLKRQIRLL 171
EAI Y+K L+ Q++++
Sbjct: 302 EAIEYLKTLQLQVQMM 317
>gi|390979910|gb|AFM30927.1| basic helix-loop-helix [Solanum lycopersicum]
Length = 330
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ILQ LVPG K+ A MLDE I YV+ L+ Q+ L
Sbjct: 162 DSHSLAERVRREKISERMKILQSLVPGCDKVTGKALMLDEIINYVQSLQNQVEFL 216
>gi|414589749|tpg|DAA40320.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 453
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE++++LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 268 SLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 319
>gi|255547017|ref|XP_002514566.1| conserved hypothetical protein [Ricinus communis]
gi|223546170|gb|EEF47672.1| conserved hypothetical protein [Ricinus communis]
Length = 566
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE+++ LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 383 SLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 434
>gi|226530189|ref|NP_001145523.1| uncharacterized protein LOC100278938 [Zea mays]
gi|195657423|gb|ACG48179.1| hypothetical protein [Zea mays]
Length = 460
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKIS+++++LQ LVPG K + A MLDE I YV+ L+RQ+ L
Sbjct: 261 DSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFL 315
>gi|293333026|ref|NP_001168271.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|194707870|gb|ACF88019.1| unknown [Zea mays]
gi|223947139|gb|ACN27653.1| unknown [Zea mays]
gi|414879034|tpg|DAA56165.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414879035|tpg|DAA56166.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 460
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKIS+++++LQ LVPG K + A MLDE I YV+ L+RQ+ L
Sbjct: 261 DSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFL 315
>gi|326489817|dbj|BAJ93982.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 427
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE++++LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 253 SLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 304
>gi|224108619|ref|XP_002314910.1| predicted protein [Populus trichocarpa]
gi|222863950|gb|EEF01081.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE+++ LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 381 SLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 432
>gi|51970054|dbj|BAD43719.1| putative bHLH transcription factor (bHLH073/ALCATRAZ) [Arabidopsis
thaliana]
Length = 210
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
Query: 109 KRRNIRISDDPQ--SVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKR 166
+R +++ S D Q +++ + RR KI+EK++ LQ+L+P K D ASMLDEAI Y+K L+
Sbjct: 85 QRNSLKRSIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQL 144
Query: 167 QIRLL 171
Q++ L
Sbjct: 145 QVQTL 149
>gi|242062782|ref|XP_002452680.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
gi|241932511|gb|EES05656.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
Length = 359
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RRE+ISE++R LQ LVPG +K+ A MLDE I YV+ L++Q+ L
Sbjct: 162 DSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFL 216
>gi|413923611|gb|AFW63543.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 352
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RRE+ISE++R LQ LVPG +K+ A MLDE I YV+ L++Q+ L
Sbjct: 152 DSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFL 206
>gi|359473485|ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH49-like
[Vitis vinifera]
Length = 609
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE+++ LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 419 SLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 470
>gi|253761888|ref|XP_002489318.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
gi|241946966|gb|EES20111.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
Length = 324
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE++++LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 248 DSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 302
>gi|242059665|ref|XP_002458978.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
gi|241930953|gb|EES04098.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
Length = 484
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKIS+++++LQ LVPG K + A MLDE I YV+ L+RQ+ L
Sbjct: 289 DSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFL 343
>gi|115441817|ref|NP_001045188.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|56784941|dbj|BAD82399.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113534719|dbj|BAF07102.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|215704868|dbj|BAG94896.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189599|gb|EEC72026.1| hypothetical protein OsI_04910 [Oryza sativa Indica Group]
gi|323388943|gb|ADX60276.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 481
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKIS+++++LQ LVPG K + A MLDE I YV+ L+RQ+ L
Sbjct: 286 DSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFL 340
>gi|293332515|ref|NP_001169165.1| uncharacterized protein LOC100383015 [Zea mays]
gi|223975273|gb|ACN31824.1| unknown [Zea mays]
Length = 443
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE++++LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 258 SLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 309
>gi|79320926|ref|NP_001031255.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|227204401|dbj|BAH57052.1| AT1G68920 [Arabidopsis thaliana]
gi|332196742|gb|AEE34863.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 485
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE+++ LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 314 SLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 365
>gi|356509797|ref|XP_003523632.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 376
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGG-TKMDTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE++R+LQ LVPG K A MLDE I YV+ L++Q+ L
Sbjct: 243 SLAERVRREKISERMRLLQELVPGCDKKTGKAVMLDEIINYVQSLQQQVEFL 294
>gi|226495537|ref|NP_001141393.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194704318|gb|ACF86243.1| unknown [Zea mays]
gi|413923610|gb|AFW63542.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 342
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RRE+ISE++R LQ LVPG +K+ A MLDE I YV+ L++Q+ L
Sbjct: 152 DSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFL 206
>gi|20127044|gb|AAM10942.1|AF488584_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 486
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE+++ LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 315 SLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 366
>gi|242047764|ref|XP_002461628.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
gi|241925005|gb|EER98149.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
Length = 178
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE++++LQ +VPG K + AS+LDE I Y++ L+RQ+ L
Sbjct: 59 DSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQRQVEFL 113
>gi|168023762|ref|XP_001764406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684270|gb|EDQ70673.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1015
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 36/47 (76%)
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
R RR++I+EK+R LQ L+P K D ASMLDEAI Y+K L+ Q++++
Sbjct: 744 RRRRDRINEKMRALQELIPNSNKTDKASMLDEAIDYLKILQLQLQMM 790
>gi|15221563|ref|NP_177058.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|79590003|ref|NP_849863.2| transcription factor bHLH49 [Arabidopsis thaliana]
gi|75333634|sp|Q9CAA9.1|BH049_ARATH RecName: Full=Transcription factor bHLH49; AltName: Full=Basic
helix-loop-helix protein 49; Short=AtbHLH49; Short=bHLH
49; AltName: Full=Transcription factor EN 82; AltName:
Full=bHLH transcription factor bHLH049
gi|12323211|gb|AAG51583.1|AC011665_4 putative DNA-binding protein [Arabidopsis thaliana]
gi|22135841|gb|AAM91106.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|25090290|gb|AAN72270.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|332196740|gb|AEE34861.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|332196741|gb|AEE34862.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 486
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE+++ LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 315 SLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 366
>gi|226508342|ref|NP_001152551.1| DNA binding protein [Zea mays]
gi|195657419|gb|ACG48177.1| DNA binding protein [Zea mays]
Length = 454
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE++++LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 269 SLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 320
>gi|168063707|ref|XP_001783811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664693|gb|EDQ51403.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 164
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ LQ LVPG +K+ A MLDE I YV+ L+RQI L
Sbjct: 82 DSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQIEFL 136
>gi|168056080|ref|XP_001780050.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668548|gb|EDQ55153.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ LQ LVPG +K+ A MLDE I YV+ L+RQI L
Sbjct: 78 DSHSLAERVRREKISERMKFLQDLVPGCSKITGKAVMLDEIINYVQSLQRQIEFL 132
>gi|297738215|emb|CBI27416.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE+++ LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 314 SLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 365
>gi|255646074|gb|ACU23524.1| unknown [Glycine max]
Length = 402
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ LQ L+PG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 201 DSHSLAERVRREKISERMKYLQDLIPGCNKVAGKAGMLDEIINYVQSLQRQVEFL 255
>gi|297814329|ref|XP_002875048.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
gi|297320885|gb|EFH51307.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 37/47 (78%)
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
R RR+KI+++++ILQ+LVP +K D ASMLDE I Y+K L+ Q+ ++
Sbjct: 225 RKRRDKINQRMKILQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMM 271
>gi|79340401|ref|NP_172483.4| transcription factor bHLH74 [Arabidopsis thaliana]
gi|75291341|sp|Q6NKN9.1|BH074_ARATH RecName: Full=Transcription factor bHLH74; AltName: Full=Basic
helix-loop-helix protein 74; Short=AtbHLH74; Short=bHLH
74; AltName: Full=Transcription factor EN 90; AltName:
Full=bHLH transcription factor bHLH074
gi|46931340|gb|AAT06474.1| At1g10120 [Arabidopsis thaliana]
gi|62320956|dbj|BAD93978.1| bHLH transcription factor like protein [Arabidopsis thaliana]
gi|332190423|gb|AEE28544.1| transcription factor bHLH74 [Arabidopsis thaliana]
Length = 366
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE++R+LQ LVPG K+ A MLDE I YV+ L++Q+ L
Sbjct: 218 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 269
>gi|388504626|gb|AFK40379.1| unknown [Medicago truncatula]
Length = 397
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ LQ LVPG K+ A MLDE I YV+ L++Q+ L
Sbjct: 200 DSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQKQVEFL 254
>gi|356534418|ref|XP_003535752.1| PREDICTED: transcription factor ABORTED MICROSPORES-like [Glycine
max]
Length = 571
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
Query: 74 EDEEPEEELGAMKEMMYRIAAMQPV---DIDPTTIRKPKRRNIRISDDPQSVAARHRREK 130
+D++ EE+ MK ++ R +M + + K +RRN + + VA R RR+K
Sbjct: 286 KDQKQEEDKDLMKNVVGRSDSMSDCSDQNEEEELDGKYRRRNGKGNQSKNLVAERKRRKK 345
Query: 131 ISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
+++++ L+ LVP +K+D AS+L +AI YVK L++Q++ LQ
Sbjct: 346 LNDRLYNLRSLVPRISKLDRASILGDAIEYVKDLQKQVKELQ 387
>gi|356502674|ref|XP_003520142.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 551
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE+++ LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 370 SLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 421
>gi|297838663|ref|XP_002887213.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297333054|gb|EFH63472.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE+++ LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 315 SLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 366
>gi|297827895|ref|XP_002881830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297327669|gb|EFH58089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 359
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
P+S+A R RR +ISE++R LQ LVP K +T+ MLD A+ Y+K L+RQ ++L N+ N
Sbjct: 289 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYKILNDNRAN 348
Query: 178 I 178
Sbjct: 349 C 349
>gi|414591902|tpg|DAA42473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 251
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE++++LQ +VPG K + AS+LDE I Y++ L+RQ+ L
Sbjct: 132 DSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQRQVEFL 186
>gi|357467301|ref|XP_003603935.1| Transcription factor BEE [Medicago truncatula]
gi|355492983|gb|AES74186.1| Transcription factor BEE [Medicago truncatula]
Length = 398
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ LQ LVPG K+ A MLDE I YV+ L++Q+ L
Sbjct: 200 DSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQKQVEFL 254
>gi|312283223|dbj|BAJ34477.1| unnamed protein product [Thellungiella halophila]
Length = 342
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKIS+K++ LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 196 DRHSLAERARREKISKKMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQVEFL 250
>gi|168056950|ref|XP_001780480.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668066|gb|EDQ54681.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 73 DSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 127
>gi|357126478|ref|XP_003564914.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 475
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 96 QPVDIDPTTIRKPKRRNIRI------SDDPQSVAARHRREKISEKIRILQRLVPGGTK-M 148
Q D + + +P + I + + D S+A R RREKIS+++++LQ LVPG K +
Sbjct: 251 QGKDAGASKLPEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVV 310
Query: 149 DTASMLDEAIRYVKFLKRQIRLL 171
A MLDE I YV+ L+RQ+ L
Sbjct: 311 GKAVMLDEIINYVQSLQRQVEFL 333
>gi|297849334|ref|XP_002892548.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
gi|297338390|gb|EFH68807.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
Length = 364
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE++R+LQ LVPG K+ A MLDE I YV+ L++Q+ L
Sbjct: 216 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 267
>gi|389827986|gb|AFL02463.1| transcription factor bHLH3 [Fragaria x ananassa]
Length = 697
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNIVGD 181
+A R RREK++E+ IL+ LVP TKMD AS+L + I YVK L+++I+ L++ ++ D
Sbjct: 477 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIKDLEARNVHL-ED 535
Query: 182 DHYNKLSLG 190
D + SLG
Sbjct: 536 DQQHTRSLG 544
>gi|334184293|ref|NP_001189548.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|330251660|gb|AEC06754.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 364
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKIS+K++ LQ +VPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 194 DRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFL 248
>gi|297734057|emb|CBI15304.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ILQ LVPG K + A +LDE I Y++ L+RQ+ L
Sbjct: 151 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 205
>gi|30680338|ref|NP_849976.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|218563534|sp|Q9ZPW3.3|BH064_ARATH RecName: Full=Transcription factor bHLH64; AltName: Full=Basic
helix-loop-helix protein 64; Short=AtbHLH64; Short=bHLH
64; AltName: Full=Transcription factor EN 79; AltName:
Full=bHLH transcription factor bHLH064
gi|330251659|gb|AEC06753.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 337
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKIS+K++ LQ +VPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 194 DRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFL 248
>gi|15239013|ref|NP_199667.1| transcription factor bHLH78 [Arabidopsis thaliana]
gi|75309142|sp|Q9FJL4.1|BH078_ARATH RecName: Full=Transcription factor bHLH78; AltName: Full=Basic
helix-loop-helix protein 78; Short=AtbHLH78; Short=bHLH
78; AltName: Full=Transcription factor EN 86; AltName:
Full=bHLH transcription factor bHLH078
gi|10177346|dbj|BAB10689.1| unnamed protein product [Arabidopsis thaliana]
gi|27754625|gb|AAO22758.1| unknown protein [Arabidopsis thaliana]
gi|28973465|gb|AAO64057.1| unknown protein [Arabidopsis thaliana]
gi|332008305|gb|AED95688.1| transcription factor bHLH78 [Arabidopsis thaliana]
Length = 498
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKI E++++LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 310 DSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 364
>gi|356545203|ref|XP_003541034.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 402
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ LQ L+PG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 201 DSHSLAERVRREKISERMKYLQDLIPGCNKVAGKAGMLDEIINYVQSLQRQVEFL 255
>gi|356516734|ref|XP_003527048.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 269
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ILQ LVPG K + A +LDE I Y++ L+RQ+ L
Sbjct: 148 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 202
>gi|414589820|tpg|DAA40391.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 244
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
P+S+A R RR KISE+IR LQ LVP K +TA MLD A+ Y+K L++Q+++L + N
Sbjct: 170 PRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQKQVKVLNDGRAN 229
Query: 178 IV 179
Sbjct: 230 CT 231
>gi|18398703|ref|NP_565434.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|15724318|gb|AAL06552.1|AF412099_1 At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|18700242|gb|AAL77731.1| At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|20197806|gb|AAD15506.2| expressed protein [Arabidopsis thaliana]
gi|330251658|gb|AEC06752.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 335
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKIS+K++ LQ +VPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 194 DRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFL 248
>gi|449439645|ref|XP_004137596.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
gi|449487081|ref|XP_004157490.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 458
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
R RR++I+EK++ LQ+LVP +K D ASMLDE I Y+K L+ Q++ +
Sbjct: 271 RRRRDRINEKMKALQKLVPNASKTDKASMLDEVIEYLKQLQAQVQFM 317
>gi|225457285|ref|XP_002284441.1| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 423
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 37/47 (78%)
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
R RR++I++K++ LQ+LVP +K D ASMLDE I Y+K L+ Q++++
Sbjct: 233 RRRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMM 279
>gi|168046350|ref|XP_001775637.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673055|gb|EDQ59584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ LQ LVPG +K+ A MLDE I YV+ L+RQI L
Sbjct: 85 DSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQIEFL 139
>gi|42569863|ref|NP_181757.2| transcription factor bHLH130 [Arabidopsis thaliana]
gi|75288858|sp|Q66GR3.1|BH130_ARATH RecName: Full=Transcription factor bHLH130; AltName: Full=Basic
helix-loop-helix protein 130; Short=AtbHLH130;
Short=bHLH 130; AltName: Full=Transcription factor EN
69; AltName: Full=bHLH transcription factor bHLH130
gi|51536448|gb|AAU05462.1| At2g42280 [Arabidopsis thaliana]
gi|52421281|gb|AAU45210.1| At2g42280 [Arabidopsis thaliana]
gi|110737862|dbj|BAF00869.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|330255005|gb|AEC10099.1| transcription factor bHLH130 [Arabidopsis thaliana]
Length = 359
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
P+S+A R RR +ISE++R LQ LVP K +T+ MLD A+ Y+K L+RQ ++L N+ N
Sbjct: 289 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYKILNDNRAN 348
Query: 178 I 178
Sbjct: 349 C 349
>gi|449527227|ref|XP_004170614.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 450
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSNQC 176
D S+A R RREKISE++++LQ LVPG K+ A MLDE I YV+ L+ Q+ L
Sbjct: 263 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQHQVEFLSMKLA 322
Query: 177 NIVGDDHYNKLSLGATTNTTIATTTASASAAG----ALDPILGHSLPFHGNRNSSFYFNH 232
++ N + ++ I++ S + PI + F+G++NSS
Sbjct: 323 SV------NTTRVDFNVDSLISSKQMYQSGTSLTHPQISPIDSSASSFYGHQNSSLPTTS 376
Query: 233 H 233
H
Sbjct: 377 H 377
>gi|226496303|ref|NP_001147052.1| protein SPATULA [Zea mays]
gi|195606902|gb|ACG25281.1| protein SPATULA [Zea mays]
Length = 215
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Query: 108 PKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQ 167
P RR+ S D + + R RR++I+EK+R LQ L+P TK D SMLDEAI Y+K L+ Q
Sbjct: 15 PTRRSR--SADFHNFSERRRRDRINEKLRALQELLPNCTKTDKVSMLDEAIDYLKSLQLQ 72
Query: 168 IRLL 171
+++L
Sbjct: 73 LQML 76
>gi|110738493|dbj|BAF01172.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 314
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE++R+LQ LVPG K+ A MLDE I YV+ L++Q+ L
Sbjct: 166 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 217
>gi|392513513|emb|CCE46185.1| bHLH transcription factor [Amborella trichopoda]
Length = 445
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 19/112 (16%)
Query: 60 HNNNNNNNNIIDQEEDEEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDP 119
HN+ + ++ + EE +EP EE+ P R +R+ + +
Sbjct: 148 HNDTDLDDLDCESEEGQEPSEEMSK-----------------PAPSRSSTKRSR--AAEV 188
Query: 120 QSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
+++ + RR +I+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q+++L
Sbjct: 189 HNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 240
>gi|290767992|gb|ADD60699.1| putative TA1 protein [Oryza officinalis]
Length = 435
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE+++ LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 270 SLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 321
>gi|222628662|gb|EEE60794.1| hypothetical protein OsJ_14380 [Oryza sativa Japonica Group]
Length = 293
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RRE+ISE++++LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 120 DSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFL 174
>gi|20127068|gb|AAM10953.1|AF488597_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 320
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKIS+K++ LQ +VPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 177 DRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFL 231
>gi|224065260|ref|XP_002301743.1| predicted protein [Populus trichocarpa]
gi|222843469|gb|EEE81016.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 36 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 90
>gi|224994136|dbj|BAH28881.1| bHLH transcription factor LjTT8 [Lotus japonicus]
Length = 678
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 117 DDPQS---VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
D+P + +A R RREK++E+ IL+ LVP TKMD AS+L + I YVK L+R+I+ L++
Sbjct: 467 DEPSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRKIQELEA 526
Query: 174 NQCNIVGDDHYNKLS 188
I + ++ S
Sbjct: 527 RNLQIEAEQQRSRTS 541
>gi|255558300|ref|XP_002520177.1| DNA binding protein, putative [Ricinus communis]
gi|223540669|gb|EEF42232.1| DNA binding protein, putative [Ricinus communis]
Length = 265
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ILQ LVPG K + A +LDE I Y++ L+RQ+ L
Sbjct: 147 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 201
>gi|168023966|ref|XP_001764508.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684372|gb|EDQ70775.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 679
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSNQC 176
D S+A R RREKISE+++ LQ LVPG K+ A MLDE I YV+ L+RQ+ L S +
Sbjct: 397 DSHSLAERVRREKISERMKYLQDLVPGCRKVTGKAVMLDEIINYVQSLQRQVESL-SMKV 455
Query: 177 NIVGDDHYNKLSL 189
V H +L+L
Sbjct: 456 ASVNPTHSGRLTL 468
>gi|225456604|ref|XP_002267633.1| PREDICTED: transcription factor bHLH79 isoform 1 [Vitis vinifera]
Length = 284
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ILQ LVPG K + A +LDE I Y++ L+RQ+ L
Sbjct: 166 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 220
>gi|413923609|gb|AFW63541.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RRE+ISE++R LQ LVPG +K+ A MLDE I YV+ L++Q+ L
Sbjct: 152 DSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFL 206
>gi|20127085|gb|AAM10957.1|AF488610_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 498
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKI E++++LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 310 DSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 364
>gi|224067162|ref|XP_002302386.1| predicted protein [Populus trichocarpa]
gi|222844112|gb|EEE81659.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE++R+LQ LVPG K+ A MLDE I YV+ L++Q+ L
Sbjct: 175 SLAERVRREKISERMRMLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 226
>gi|356495611|ref|XP_003516668.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 414
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE+++ LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 233 SLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 284
>gi|326525931|dbj|BAJ93142.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKIS+++++LQ LVPG K + A MLDE I YV+ L+RQ+ L
Sbjct: 273 DSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFL 327
>gi|290767965|gb|ADD60674.1| putative TA1 protein [Oryza granulata]
Length = 430
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE+++ LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 265 SLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 316
>gi|224066527|ref|XP_002302124.1| predicted protein [Populus trichocarpa]
gi|222843850|gb|EEE81397.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 98 VDIDPTTIRKPKRRNIRI----SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASM 153
++D KP +R+ + + +++ R RR++I+EK+R LQ L+P K D ASM
Sbjct: 13 AELDSAVANKPAKRSGSTRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASM 72
Query: 154 LDEAIRYVKFLKRQIRLL 171
LDEAI Y+K L+ Q++++
Sbjct: 73 LDEAIEYLKSLQLQLQVM 90
>gi|297836564|ref|XP_002886164.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332004|gb|EFH62423.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 337
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKIS+K++ LQ +VPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 194 DRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFL 248
>gi|297602519|ref|NP_001052532.2| Os04g0350700 [Oryza sativa Japonica Group]
gi|57834129|emb|CAE05521.2| OSJNBa0038P21.14 [Oryza sativa Japonica Group]
gi|215766234|dbj|BAG98462.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255675358|dbj|BAF14446.2| Os04g0350700 [Oryza sativa Japonica Group]
Length = 263
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RRE+ISE++++LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 90 DSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFL 144
>gi|326495502|dbj|BAJ85847.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKIS+++++LQ LVPG K + A MLDE I YV+ L+RQ+ L
Sbjct: 273 DSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFL 327
>gi|302774124|ref|XP_002970479.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
gi|302793582|ref|XP_002978556.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300153905|gb|EFJ20542.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300161995|gb|EFJ28609.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
Length = 125
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 42 DSHSLAERVRREKISERMKTLQDLVPGCSKVTGKAMMLDEIINYVQSLQRQVEFL 96
>gi|115461987|ref|NP_001054593.1| Os05g0139100 [Oryza sativa Japonica Group]
gi|50511445|gb|AAT77368.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51854388|gb|AAU10768.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578144|dbj|BAF16507.1| Os05g0139100 [Oryza sativa Japonica Group]
Length = 505
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 37/47 (78%)
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
R RR++I+EK+R LQ L+P K+D ASML+EAI Y+K L+ Q++++
Sbjct: 345 RRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMM 391
>gi|2673918|gb|AAB88652.1| unknown protein [Arabidopsis thaliana]
Length = 380
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
P+S+A R RR +ISE++R LQ LVP K +T+ MLD A+ Y+K L+RQ ++L N+ N
Sbjct: 310 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYKILNDNRAN 369
Query: 178 I 178
Sbjct: 370 C 370
>gi|297835410|ref|XP_002885587.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331427|gb|EFH61846.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 374
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE++ +LQ LVPG ++ A MLDE I YV+ L+RQ+ L
Sbjct: 203 DSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFL 257
>gi|297792043|ref|XP_002863906.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
gi|297309741|gb|EFH40165.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
Length = 498
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKI E++++LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 308 DSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 362
>gi|158147058|gb|ABW22630.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147060|gb|ABW22631.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147061|gb|ABW22632.1| bHLH transcription factor Upa20 [Capsicum annuum]
Length = 340
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE++++LQ LVPG K+ A MLDE I YV+ L+ Q+ L
Sbjct: 173 DSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIINYVQSLQNQVEFL 227
>gi|449466372|ref|XP_004150900.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 412
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSNQC 176
D S+A R RREKISE++++LQ LVPG K+ A MLDE I YV+ L+ Q+ L
Sbjct: 225 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQHQVEFLSMKLA 284
Query: 177 NIVGDDHYNKLSLGATTNTTIATTTASASAAG----ALDPILGHSLPFHGNRNSSFYFNH 232
++ N + ++ I++ S + PI + F+G++NSS
Sbjct: 285 SV------NTTRVDFNVDSLISSKQMYQSGTSLTHPQISPIDSSTSSFYGHQNSSLPTTS 338
Query: 233 H 233
H
Sbjct: 339 H 339
>gi|449459842|ref|XP_004147655.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
gi|449525371|ref|XP_004169691.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
Length = 546
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKIS++++ LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 362 DSHSLAERVRREKISKRMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 416
>gi|46367684|emb|CAE00874.1| TA1 protein [Oryza sativa Japonica Group]
Length = 204
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKIS+++++LQ LVPG K + A MLDE I YV+ L+RQ+ L
Sbjct: 83 DSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFL 137
>gi|339716200|gb|AEJ88339.1| putative MYC protein [Tamarix hispida]
Length = 301
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ILQ LVPG K + A +LDE I Y++ L+RQ+ L
Sbjct: 178 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 232
>gi|297733906|emb|CBI15153.3| unnamed protein product [Vitis vinifera]
Length = 385
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 37/47 (78%)
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
R RR++I++K++ LQ+LVP +K D ASMLDE I Y+K L+ Q++++
Sbjct: 195 RRRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMM 241
>gi|222619751|gb|EEE55883.1| hypothetical protein OsJ_04533 [Oryza sativa Japonica Group]
Length = 483
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKIS+++++LQ LVPG K + A MLDE I YV+ L+RQ+ L
Sbjct: 288 DSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFL 342
>gi|357516593|ref|XP_003628585.1| Transcription factor bHLH79 [Medicago truncatula]
gi|355522607|gb|AET03061.1| Transcription factor bHLH79 [Medicago truncatula]
Length = 278
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ILQ LVPG K + A +LDE I Y++ L+RQ+ L
Sbjct: 160 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 214
>gi|323388959|gb|ADX60284.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 437
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE+++ LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 272 SLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 323
>gi|255540845|ref|XP_002511487.1| DNA binding protein, putative [Ricinus communis]
gi|223550602|gb|EEF52089.1| DNA binding protein, putative [Ricinus communis]
Length = 275
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ILQ LVPG K + A +LDE I Y++ L+RQ+ L
Sbjct: 155 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 209
>gi|449473858|ref|XP_004154003.1| PREDICTED: uncharacterized protein LOC101205943 [Cucumis sativus]
gi|449518641|ref|XP_004166345.1| PREDICTED: uncharacterized LOC101205943 [Cucumis sativus]
Length = 372
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ LQRLVPG K+ A MLDE I YV+ L+ Q+ L
Sbjct: 189 DSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFL 243
>gi|255541166|ref|XP_002511647.1| DNA binding protein, putative [Ricinus communis]
gi|223548827|gb|EEF50316.1| DNA binding protein, putative [Ricinus communis]
Length = 465
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 37/47 (78%)
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
R RR+KI+++++ LQ+LVP +K D ASMLDE I Y+K L+ Q++++
Sbjct: 293 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMM 339
>gi|168050670|ref|XP_001777781.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670882|gb|EDQ57443.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 67
Score = 57.8 bits (138), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/54 (55%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 116 SDDPQSVAARHRREKISEKIRILQRLVPGGTKMD-TASMLDEAIRYVKFLKRQI 168
+ D S+A R RREKISE+++ LQ LVPG K+ A MLDE I YV+FL+RQ+
Sbjct: 13 ATDSHSLAERVRREKISERMKYLQDLVPGCKKVTGKAVMLDEIINYVQFLQRQV 66
>gi|115467562|ref|NP_001057380.1| Os06g0275600 [Oryza sativa Japonica Group]
gi|55295989|dbj|BAD68029.1| putative TA1 protein [Oryza sativa Japonica Group]
gi|113595420|dbj|BAF19294.1| Os06g0275600 [Oryza sativa Japonica Group]
Length = 437
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE+++ LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 272 SLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 323
>gi|378924999|dbj|BAL63287.1| basic helix-loop-helix protein APG [Oryza sativa Japonica Group]
Length = 432
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 37/47 (78%)
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
R RR++I+EK+R LQ L+P K+D ASML+EAI Y+K L+ Q++++
Sbjct: 345 RRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMM 391
>gi|226492870|ref|NP_001146411.1| uncharacterized protein LOC100279991 [Zea mays]
gi|219887061|gb|ACL53905.1| unknown [Zea mays]
Length = 254
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 37/47 (78%)
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
+ RR++I+EK+R LQ L+P K+D ASMLDEAI Y+K L+ Q++++
Sbjct: 10 QRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 56
>gi|118486023|gb|ABK94855.1| unknown [Populus trichocarpa]
Length = 348
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE+++ LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 162 SLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 213
>gi|297798162|ref|XP_002866965.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
gi|297312801|gb|EFH43224.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNIVGD 181
++ + RR +I+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q+++L G
Sbjct: 183 LSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRN----GI 238
Query: 182 DHYNKLSLGATTNTTIATTTASASAAGALDPILGHSLPFHGNRNSSFYFN 231
+ ++ L L TT + + A DP+L H+ F N+ N
Sbjct: 239 NLHHPLCLPGTTLHPLQLSQIRPPEATN-DPLLNHTNQFASTSNAPEMIN 287
>gi|357117083|ref|XP_003560304.1| PREDICTED: transcription factor bHLH74-like isoform 1 [Brachypodium
distachyon]
Length = 326
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RR+KISE++++LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 158 SLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFL 209
>gi|219362473|ref|NP_001136461.1| uncharacterized protein LOC100216572 [Zea mays]
gi|194695798|gb|ACF81983.1| unknown [Zea mays]
Length = 366
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RRE+ISE++R LQ LVPG +K+ A MLDE I YV+ L++Q+ L
Sbjct: 155 DSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFL 209
>gi|21536756|gb|AAM61088.1| unknown [Arabidopsis thaliana]
Length = 270
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 43/68 (63%)
Query: 106 RKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
RKP ++ R D A+ R+E++ E+I LQ+LV K D AS+L EA+ Y+KFL+
Sbjct: 135 RKPGKKGKRNQDKSSVGIAKVRKERLGERIAALQQLVSPYGKTDAASVLHEAMGYIKFLQ 194
Query: 166 RQIRLLQS 173
QI++L S
Sbjct: 195 DQIQVLCS 202
>gi|449440736|ref|XP_004138140.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
gi|449477343|ref|XP_004154996.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
Length = 276
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ILQ LVPG K + A +LDE I Y++ L+RQ+ L
Sbjct: 156 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 210
>gi|357117085|ref|XP_003560305.1| PREDICTED: transcription factor bHLH74-like isoform 2 [Brachypodium
distachyon]
Length = 317
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RR+KISE++++LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 152 SLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFL 203
>gi|326492944|dbj|BAJ90328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR++I+EK+R LQ L+P K D ASMLDEAI Y+K L+ Q++++
Sbjct: 43 LSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKTLQMQVQMM 92
>gi|290768004|gb|ADD60710.1| putative TA1 protein [Oryza brachyantha]
Length = 426
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE+++ LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 261 SLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 312
>gi|358347900|ref|XP_003637988.1| Transcription factor BPE [Medicago truncatula]
gi|355503923|gb|AES85126.1| Transcription factor BPE [Medicago truncatula]
Length = 249
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ILQ LVPG K + A +LDE I Y++ L+RQ+ L
Sbjct: 160 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 214
>gi|296089503|emb|CBI39322.3| unnamed protein product [Vitis vinifera]
Length = 181
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSNQ 175
P+S+A R RR +IS++IR LQ LVP K +TA ML+EA+ YVKFL+++I+ L +Q
Sbjct: 115 PRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQQKIQELSEHQ 172
>gi|115448177|ref|NP_001047868.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|41053096|dbj|BAD08039.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113537399|dbj|BAF09782.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|215767339|dbj|BAG99567.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 361
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RRE+ISE++R LQ LVPG K+ A MLDE I YV+ L++Q+ L
Sbjct: 173 DSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEFL 227
>gi|356508360|ref|XP_003522925.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 398
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE++ LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 203 DSHSLAERVRREKISERMNYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQVEFL 257
>gi|33339703|gb|AAQ14331.1|AF283506_1 MYC1 [Catharanthus roseus]
Length = 271
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ILQ LVPG K + A +LDE I Y++ L+RQ+ L
Sbjct: 153 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 207
>gi|449454949|ref|XP_004145216.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 340
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ LQRLVPG K+ A MLDE I YV+ L+ Q+ L
Sbjct: 157 DSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFL 211
>gi|30696324|ref|NP_849829.1| transcription factor BPE [Arabidopsis thaliana]
gi|122222656|sp|Q0JXE7.1|BPE_ARATH RecName: Full=Transcription factor BPE; AltName: Full=Basic
helix-loop-helix protein 31; Short=AtbHLH31; Short=bHLH
31; AltName: Full=Protein BIG PETAL; AltName:
Full=Transcription factor EN 88; AltName: Full=bHLH
transcription factor bHLH031
gi|113431920|emb|CAK32499.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195477|gb|AEE33598.1| transcription factor BPE [Arabidopsis thaliana]
Length = 343
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 60/109 (55%), Gaps = 9/109 (8%)
Query: 65 NNNNIIDQEEDEEPE-EELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVA 123
N ID+ D + E E LG E + M+P D +R + + + D S+A
Sbjct: 98 NKRQKIDEVCDGKAEAESLGTETEQ--KKQQMEPTK-DYIHVRARRGQ----ATDSHSLA 150
Query: 124 ARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
R RREKISE+++ILQ LVPG K + A +LDE I Y++ L+RQ+ L
Sbjct: 151 ERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 199
>gi|22331295|ref|NP_189011.2| transcription factor bHLH77 [Arabidopsis thaliana]
gi|75311240|sp|Q9LK48.1|BH077_ARATH RecName: Full=Transcription factor bHLH77; AltName: Full=Basic
helix-loop-helix protein 77; Short=AtbHLH77; Short=bHLH
77; AltName: Full=Transcription factor EN 87; AltName:
Full=bHLH transcription factor bHLH077
gi|9293943|dbj|BAB01846.1| unnamed protein product [Arabidopsis thaliana]
gi|17529310|gb|AAL38882.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|20465453|gb|AAM20186.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|332643281|gb|AEE76802.1| transcription factor bHLH77 [Arabidopsis thaliana]
Length = 371
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE++ +LQ LVPG ++ A MLDE I YV+ L+RQ+ L
Sbjct: 200 DSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFL 254
>gi|218191430|gb|EEC73857.1| hypothetical protein OsI_08622 [Oryza sativa Indica Group]
Length = 361
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RRE+ISE++R LQ LVPG K+ A MLDE I YV+ L++Q+ L
Sbjct: 173 DSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEFL 227
>gi|326500148|dbj|BAJ90909.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 37/47 (78%)
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
R RR++I+EK+R LQ L+P K+D ASML+EAI Y+K L+ Q++++
Sbjct: 334 RRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMM 380
>gi|8778763|gb|AAF79771.1|AC009317_30 T30E16.21 [Arabidopsis thaliana]
Length = 348
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ILQ LVPG K + A +LDE I Y++ L+RQ+ L
Sbjct: 139 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 193
>gi|225460440|ref|XP_002271390.1| PREDICTED: transcription factor bHLH80-like [Vitis vinifera]
Length = 251
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 46/67 (68%), Gaps = 3/67 (4%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSNQ-- 175
P+S+A R RR +IS++IR LQ LVP K +TA ML+EA+ YVKFL+++I+ L +Q
Sbjct: 185 PRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQQKIQELSEHQKK 244
Query: 176 CNIVGDD 182
C + +
Sbjct: 245 CTCLARE 251
>gi|125557558|gb|EAZ03094.1| hypothetical protein OsI_25238 [Oryza sativa Indica Group]
gi|125599428|gb|EAZ39004.1| hypothetical protein OsJ_23423 [Oryza sativa Japonica Group]
Length = 256
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ILQ LVPG K + AS+LDE I Y++ L+ Q+ L
Sbjct: 137 DSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQVEFL 191
>gi|326523485|dbj|BAJ92913.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 37/47 (78%)
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
R RR++I+EK+R LQ L+P K+D ASML+EAI Y+K L+ Q++++
Sbjct: 334 RRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMM 380
>gi|168059612|ref|XP_001781795.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666702|gb|EDQ53349.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 656
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 450 DSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVENL 504
>gi|449447083|ref|XP_004141299.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 249
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE++R+LQ LVPG K+ A MLDE I YV+ L++Q+ L
Sbjct: 91 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 142
>gi|255645941|gb|ACU23459.1| unknown [Glycine max]
Length = 193
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 138 DSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQVEFL 192
>gi|37991892|gb|AAR06338.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 384
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 64/132 (48%), Gaps = 14/132 (10%)
Query: 51 SSSTLLFGDHNNNNNNNNIIDQE-----------EDEEPEEELGAMKEMMYRIAAMQPVD 99
+S + +G ++ +I +E ED E E+++ + A P
Sbjct: 128 ASKSAYYGVEDDGGGGCSIRQKEDTDEIDALMSTEDGEEEDDVLSTGRTPGCRAGGSP-- 185
Query: 100 IDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIR 159
D T R + P++ ++E++ + +R L+ ++PGG +MDT ++LDEA+R
Sbjct: 186 -DSTCSSGASRSDCGGGRKPEAGGGERKKERMKKMMRTLKGIIPGGDRMDTPAVLDEAVR 244
Query: 160 YVKFLKRQIRLL 171
Y+K LK +++ L
Sbjct: 245 YLKSLKVEVKKL 256
>gi|357137204|ref|XP_003570191.1| PREDICTED: uncharacterized protein LOC100822236 [Brachypodium
distachyon]
Length = 361
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RRE+ISE++R LQ LVPG K+ A MLDE I YV+ L++Q+ L
Sbjct: 170 DSHSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQSLQKQVEFL 224
>gi|226504718|ref|NP_001150409.1| LOC100284039 [Zea mays]
gi|195639036|gb|ACG38986.1| protein SPATULA [Zea mays]
gi|414873439|tpg|DAA51996.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 255
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 61/112 (54%), Gaps = 8/112 (7%)
Query: 61 NNNNNNNNIIDQEEDEEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQ 120
N ++NN + E + + A K + I A +P D +R RR + D
Sbjct: 85 NKSSNNKGSLRTEVETDSRS---AGKAVSKNIPAAEPPKQDYIHVRA--RRGQ--ATDSH 137
Query: 121 SVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE++++LQ LVPG K + AS+LDE I Y++ L+ Q+ L
Sbjct: 138 SLAERARREKISERMKVLQDLVPGCNKVIGKASVLDEIINYIQSLQCQVEFL 189
>gi|115455099|ref|NP_001051150.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|28273388|gb|AAO38474.1| putative Helix-loop-helix DNA-binding domain containing protein
[Oryza sativa Japonica Group]
gi|50428703|gb|AAT77054.1| putative DNA binding protein [Oryza sativa Japonica Group]
gi|108710880|gb|ABF98675.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549621|dbj|BAF13064.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|125544737|gb|EAY90876.1| hypothetical protein OsI_12481 [Oryza sativa Indica Group]
gi|125587792|gb|EAZ28456.1| hypothetical protein OsJ_12437 [Oryza sativa Japonica Group]
Length = 327
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RR+KISE++++LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 159 SLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFL 210
>gi|255549295|ref|XP_002515701.1| DNA binding protein, putative [Ricinus communis]
gi|223545138|gb|EEF46648.1| DNA binding protein, putative [Ricinus communis]
Length = 244
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 115 ISDDPQSVAARHR-REKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
+S +P R R R+ + +K RILQ+L+P +MDTA+ML EA Y+ FL+ Q++ LQ+
Sbjct: 100 LSSNPSQKNKRQRCRQTMGDKFRILQKLMPWDKRMDTATMLAEAYNYINFLQAQVKALQA 159
>gi|226493752|ref|NP_001140849.1| uncharacterized protein LOC100272925 [Zea mays]
gi|194690530|gb|ACF79349.1| unknown [Zea mays]
gi|194701428|gb|ACF84798.1| unknown [Zea mays]
gi|223949911|gb|ACN29039.1| unknown [Zea mays]
gi|413919543|gb|AFW59475.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 214
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 102 PTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYV 161
P P RR+ S D + + R RR++I+EK+R LQ L+P TK D SMLDEAI Y+
Sbjct: 8 PRRATPPTRRSR--SADFHNFSERRRRDRINEKLRALQELLPNCTKTDKVSMLDEAIDYL 65
Query: 162 KFLKRQIRLL 171
K L+ Q+++L
Sbjct: 66 KSLQLQLQML 75
>gi|413939376|gb|AFW73927.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 279
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 101 DPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRY 160
DP +P+ + R ++ +++ + RR +I+EK++ LQ L+P +K D ASMLD+AI Y
Sbjct: 32 DPARPARPRGKRSRAAEV-HNLSEKRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEY 90
Query: 161 VKFLKRQIRLL 171
+K L+ Q+++L
Sbjct: 91 LKHLQLQVQML 101
>gi|212723614|ref|NP_001131789.1| uncharacterized protein LOC100193160 [Zea mays]
gi|194692538|gb|ACF80353.1| unknown [Zea mays]
gi|414872589|tpg|DAA51146.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RR+KISE++++LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 150 SLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFL 201
>gi|342298438|emb|CBY05409.1| ALCATRAZ-like protein [Lepidium campestre]
Length = 197
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ + RR KI+EK++ LQ+L+P K D ASMLDEAI Y+K L+ Q++ L
Sbjct: 99 LSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTL 148
>gi|218196060|gb|EEC78487.1| hypothetical protein OsI_18387 [Oryza sativa Indica Group]
Length = 289
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 39/50 (78%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR++I+EK+R LQ L+P K+D ASML+EAI Y+K L+ Q++++
Sbjct: 126 LSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMM 175
>gi|6520231|dbj|BAA87957.1| helix-loop-helix protein homolog [Arabidopsis thaliana]
Length = 318
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ILQ LVPG K + A +LDE I Y++ L+RQ+ L
Sbjct: 145 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 199
>gi|351720977|ref|NP_001237962.1| uncharacterized protein LOC100306638 [Glycine max]
gi|255629145|gb|ACU14917.1| unknown [Glycine max]
Length = 240
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query: 102 PTTIRKPKRRNIRI----SDDPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDE 156
P KP ++R + D S+A R RREKISE+++ILQ L PG K + A +LDE
Sbjct: 103 PCEAPKPDYIHVRARRGQATDSHSLAERARREKISERMKILQDLAPGCNKVIGKALVLDE 162
Query: 157 AIRYVKFLKRQIRLL 171
I Y++ L+RQ+ L
Sbjct: 163 IINYIQSLQRQVEFL 177
>gi|125544694|gb|EAY90833.1| hypothetical protein OsI_12438 [Oryza sativa Indica Group]
Length = 263
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 65/134 (48%), Gaps = 14/134 (10%)
Query: 51 SSSTLLFGDHNNNNNNNNIIDQE-----------EDEEPEEELGAMKEMMYRIAAMQPVD 99
+S + +G ++ +I +E ED E E+++ + A P
Sbjct: 128 ASKSAYYGVEDDGGGGCSIRQKEDTDEIDALMSTEDGEEEDDVLSTGRTPGCRAGGSP-- 185
Query: 100 IDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIR 159
D T R + P++ ++E++ + +R L+ ++PGG +MDT ++LDEA+R
Sbjct: 186 -DSTCSSGASRSDCGGGRKPEAGGGERKKERMKKMMRTLKGIIPGGDRMDTPAVLDEAVR 244
Query: 160 YVKFLKRQIRLLQS 173
Y+K LK +++ L +
Sbjct: 245 YLKSLKVEVKKLGA 258
>gi|357115750|ref|XP_003559649.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 445
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 105 IRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFL 164
++ P R R ++ +++ R RR++I+EK++ LQ L+P K D ASMLDEAI Y+K L
Sbjct: 257 LKLPTARRSRAAEV-HNLSERRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKTL 315
Query: 165 KRQIRLL 171
+ Q++++
Sbjct: 316 QMQVQMM 322
>gi|356553623|ref|XP_003545154.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 562
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 37/47 (78%)
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
R RR++I+EK+R LQ+L+P K D ASML+EAI Y+K L+ Q++++
Sbjct: 370 RRRRDRINEKMRTLQQLIPNSNKTDKASMLEEAIEYLKSLQFQLQVM 416
>gi|219363643|ref|NP_001136510.1| uncharacterized protein LOC100216625 [Zea mays]
gi|194688606|gb|ACF78387.1| unknown [Zea mays]
gi|223949339|gb|ACN28753.1| unknown [Zea mays]
gi|413939377|gb|AFW73928.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 280
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 101 DPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRY 160
DP +P+ + R ++ +++ + RR +I+EK++ LQ L+P +K D ASMLD+AI Y
Sbjct: 32 DPARPARPRGKRSRAAEV-HNLSEKRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEY 90
Query: 161 VKFLKRQIRLL 171
+K L+ Q+++L
Sbjct: 91 LKHLQLQVQML 101
>gi|342298426|emb|CBY05403.1| ALCATRAZ-like protein [Lepidium appelianum]
Length = 173
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ + RR KI+EK++ LQ+L+P K D ASMLDEAI Y+K L+ Q++ L
Sbjct: 99 LSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYMKQLQLQVQTL 148
>gi|225441696|ref|XP_002277274.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 405
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 13/103 (12%)
Query: 81 ELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQR 140
E+ AM++ + Q D P IR + + P+S+A R RR +ISE++R LQ
Sbjct: 303 EMAAMEKFL------QFQDSVPCKIRAKRG----CATHPRSIAERVRRTRISERMRKLQE 352
Query: 141 LVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSNQ--CNIVG 180
LVP K +TA MLD A+ Y+K L++Q L N+ C +G
Sbjct: 353 LVPNMDKQTNTADMLDLAVEYIKDLQKQYNTLTDNRAHCKCLG 395
>gi|449458041|ref|XP_004146756.1| PREDICTED: transcription factor BPE-like [Cucumis sativus]
Length = 298
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 7/75 (9%)
Query: 104 TIRKPKRRNIRI------SDDPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDE 156
T +PK+ I + + D S+A R RREKISE+++ILQ LVPG K + A +LDE
Sbjct: 160 TPEQPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDE 219
Query: 157 AIRYVKFLKRQIRLL 171
I Y++ L+RQ+ L
Sbjct: 220 IINYIQSLQRQVEFL 234
>gi|297834858|ref|XP_002885311.1| hypothetical protein ARALYDRAFT_342085 [Arabidopsis lyrata subsp.
lyrata]
gi|297331151|gb|EFH61570.1| hypothetical protein ARALYDRAFT_342085 [Arabidopsis lyrata subsp.
lyrata]
Length = 270
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%)
Query: 101 DPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRY 160
+P RKP ++ R D A+ R+E++ E+I LQ+LV K D AS+L EA+ Y
Sbjct: 130 EPDQNRKPDKKCKRNQDKSSVGIAKVRKERLGERIAALQQLVSPYGKTDAASVLHEAMGY 189
Query: 161 VKFLKRQIRLLQS 173
+KFL+ QI++L S
Sbjct: 190 IKFLQDQIQVLCS 202
>gi|297837577|ref|XP_002886670.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
gi|297332511|gb|EFH62929.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
Length = 264
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 58/109 (53%), Gaps = 9/109 (8%)
Query: 65 NNNNIIDQEEDEEPE-EELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVA 123
N ID+ D + E E LG E + + I+PT R + D S+A
Sbjct: 98 NKRQKIDEVCDGKAEAESLGTETEQ-------KKLQIEPTKDYIHVRARRGQATDSHSLA 150
Query: 124 ARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
R RREKISE+++ILQ LVPG K + A +LDE I Y++ L+RQ+ L
Sbjct: 151 ERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 199
>gi|195639614|gb|ACG39275.1| hypothetical protein [Zea mays]
Length = 282
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 101 DPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRY 160
DP +P+ + R ++ +++ + RR +I+EK++ LQ L+P +K D ASMLD+AI Y
Sbjct: 34 DPARPARPRGKRSRAAEV-HNLSEKRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEY 92
Query: 161 VKFLKRQIRLL 171
+K L+ Q+++L
Sbjct: 93 LKHLQLQVQML 103
>gi|326525038|dbj|BAK07789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 497
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 38/49 (77%)
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
R RR++I+EK+R LQ L+P K+D ASML+EAI Y+K L+ Q++++ +
Sbjct: 338 RRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMST 386
>gi|297605234|ref|NP_001056902.2| Os06g0164400 [Oryza sativa Japonica Group]
gi|255676746|dbj|BAF18816.2| Os06g0164400, partial [Oryza sativa Japonica Group]
Length = 188
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ + RR KI+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q+++L
Sbjct: 33 LSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 82
>gi|108709600|gb|ABF97395.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|125544695|gb|EAY90834.1| hypothetical protein OsI_12439 [Oryza sativa Indica Group]
gi|125586994|gb|EAZ27658.1| hypothetical protein OsJ_11606 [Oryza sativa Japonica Group]
gi|215678773|dbj|BAG95210.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 263
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 64/132 (48%), Gaps = 14/132 (10%)
Query: 51 SSSTLLFGDHNNNNNNNNIIDQE-----------EDEEPEEELGAMKEMMYRIAAMQPVD 99
+S + +G ++ +I +E ED E E+++ + A P
Sbjct: 128 ASKSAYYGVEDDGGGGCSIRQKEDTDEIDALMSTEDGEEEDDVLSTGRTPGCRAGGSP-- 185
Query: 100 IDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIR 159
D T R + P++ ++E++ + +R L+ ++PGG +MDT ++LDEA+R
Sbjct: 186 -DSTCSSGASRSDCGGGRKPEAGGGERKKERMKKMMRTLKGIIPGGDRMDTPAVLDEAVR 244
Query: 160 YVKFLKRQIRLL 171
Y+K LK +++ L
Sbjct: 245 YLKSLKVEVKKL 256
>gi|414865637|tpg|DAA44194.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 289
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKI+E++++LQ LVPG K+ A MLDE I YV+ L+RQI L
Sbjct: 136 SLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIEFL 187
>gi|223945659|gb|ACN26913.1| unknown [Zea mays]
Length = 267
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKI+E++++LQ LVPG K+ A MLDE I YV+ L+RQI L
Sbjct: 136 SLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIEFL 187
>gi|147789805|emb|CAN62935.1| hypothetical protein VITISV_008845 [Vitis vinifera]
Length = 394
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 13/103 (12%)
Query: 81 ELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQR 140
E+ AM++ + Q D P IR + + P+S+A R RR +ISE++R LQ
Sbjct: 292 EMAAMEKFL------QFQDSVPCKIRAKRG----CATHPRSIAERVRRTRISERMRKLQE 341
Query: 141 LVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSNQ--CNIVG 180
LVP K +TA MLD A+ Y+K L++Q L N+ C +G
Sbjct: 342 LVPNMDKQTNTADMLDLAVEYIKDLQKQYNTLTDNRAHCKCLG 384
>gi|18423212|ref|NP_568745.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|30695963|ref|NP_851163.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|75305763|sp|Q93W88.1|BH137_ARATH RecName: Full=Transcription factor bHLH137; AltName: Full=Basic
helix-loop-helix protein 137; Short=AtbHLH137;
Short=bHLH 137; AltName: Full=Transcription factor EN
89; AltName: Full=bHLH transcription factor bHLH137
gi|16226850|gb|AAL16280.1|AF428350_1 unknown protein [Arabidopsis thaliana]
gi|15982883|gb|AAL09788.1| probable DNA-binding protein [Arabidopsis thaliana]
gi|21360503|gb|AAM47367.1| At5g50917/At5g50917 [Arabidopsis thaliana]
gi|21593195|gb|AAM65144.1| unknown [Arabidopsis thaliana]
gi|332008626|gb|AED96009.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|332008627|gb|AED96010.1| transcription factor bHLH137 [Arabidopsis thaliana]
Length = 286
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE++R LQ LVPG K+ A MLDE I YV+ L+ Q+ L
Sbjct: 145 DSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFL 199
>gi|356541324|ref|XP_003539128.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 459
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 37/47 (78%)
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
R RR+KI+++++ LQ+LVP +K D ASMLDE I Y+K L+ Q++++
Sbjct: 280 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMM 326
>gi|302798757|ref|XP_002981138.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
gi|300151192|gb|EFJ17839.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
Length = 85
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR++I+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q+++L
Sbjct: 27 LSERRRRDRINEKMKALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQVL 76
>gi|359480799|ref|XP_002277966.2| PREDICTED: uncharacterized protein LOC100245665 [Vitis vinifera]
gi|296082405|emb|CBI21410.3| unnamed protein product [Vitis vinifera]
Length = 394
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 11/99 (11%)
Query: 73 EEDEEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKIS 132
E D E EE L A+ E + AA +R +R+ + + +++ + RR +I+
Sbjct: 108 EYDCESEEGLEALVEEVATKAA---------PLRSSSKRSR--AAEVHNLSEKRRRSRIN 156
Query: 133 EKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
EK++ LQ L+P K D ASMLDEAI Y+K L+ Q+++L
Sbjct: 157 EKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 195
>gi|222635385|gb|EEE65517.1| hypothetical protein OsJ_20959 [Oryza sativa Japonica Group]
Length = 545
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE+++ LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 380 SLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 431
>gi|218197962|gb|EEC80389.1| hypothetical protein OsI_22515 [Oryza sativa Indica Group]
Length = 494
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE+++ LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 329 SLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 380
>gi|218192387|gb|EEC74814.1| hypothetical protein OsI_10634 [Oryza sativa Indica Group]
gi|222624516|gb|EEE58648.1| hypothetical protein OsJ_10029 [Oryza sativa Japonica Group]
Length = 307
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 79 EEELGAM--KEMMYRIAAMQPVDIDPTTIRKPKRRNIR-ISDDPQSVAARHRREKISEKI 135
+EE G M +E+ A + D D + R R + + S+A R RREKI+E++
Sbjct: 92 QEETGEMPQRELSMEHAGEKAGDADASREEYVHVRAKRGQATNSHSLAERFRREKINERM 151
Query: 136 RILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
++LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 152 KLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFL 188
>gi|449443927|ref|XP_004139727.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 529
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNIV 179
++ R RR++I+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q++++ S C ++
Sbjct: 323 LSERRRRDRINEKMKALQELIPRCNKTDKASMLDEAIEYLKTLQLQVQMM-SMGCGMM 379
>gi|356526880|ref|XP_003532044.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 273
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ILQ LVPG K + A +LDE I Y++ L+RQ+ L
Sbjct: 155 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 209
>gi|242041659|ref|XP_002468224.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
gi|241922078|gb|EER95222.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
Length = 291
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKI+E++++LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 135 SLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFL 186
>gi|21592490|gb|AAM64440.1| unknown [Arabidopsis thaliana]
Length = 264
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ILQ LVPG K + A +LDE I Y++ L+RQ+ L
Sbjct: 145 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 199
>gi|108710019|gb|ABF97814.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 481
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR++I+EK+R LQ L+P K D ASMLDEAI Y+K L+ Q++++
Sbjct: 325 LSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMM 374
>gi|449462268|ref|XP_004148863.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 187
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ LQ LVPG K+ A MLDE I YV+ L++Q+ L
Sbjct: 15 DSHSLAERARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQSLQQQVEFL 69
>gi|18406408|ref|NP_564749.1| transcription factor BPE [Arabidopsis thaliana]
gi|28393152|gb|AAO42009.1| putative bHLH protein [Arabidopsis thaliana]
gi|28827506|gb|AAO50597.1| putative bHLH protein [Arabidopsis thaliana]
gi|113431918|emb|CAK32498.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195476|gb|AEE33597.1| transcription factor BPE [Arabidopsis thaliana]
Length = 264
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ILQ LVPG K + A +LDE I Y++ L+RQ+ L
Sbjct: 145 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 199
>gi|226529517|ref|NP_001151233.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|195645224|gb|ACG42080.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|414886017|tpg|DAA62031.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 408
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 99 DIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEA 157
D P IR KR + P+S+A R RR KISE+IR LQ LVP K +TA MLD A
Sbjct: 319 DAVPCKIRA-KRG---CATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLA 374
Query: 158 IRYVKFLKRQIRLLQSNQCNIV 179
+ Y+K L++Q+++L + +
Sbjct: 375 VDYIKDLQKQVKVLNDGRASCT 396
>gi|357482855|ref|XP_003611714.1| Transcription factor SPATULA [Medicago truncatula]
gi|355513049|gb|AES94672.1| Transcription factor SPATULA [Medicago truncatula]
Length = 344
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 37/50 (74%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ + RR +I+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q+++L
Sbjct: 118 LSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 167
>gi|108710018|gb|ABF97813.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 485
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR++I+EK+R LQ L+P K D ASMLDEAI Y+K L+ Q++++
Sbjct: 325 LSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMM 374
>gi|357510373|ref|XP_003625475.1| Transcription factor PIF1 [Medicago truncatula]
gi|355500490|gb|AES81693.1| Transcription factor PIF1 [Medicago truncatula]
Length = 467
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 7/78 (8%)
Query: 110 RRNIRISDDPQSVAA-------RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVK 162
++NI S +S AA R RR++I+EK++ LQ L+P K D ASMLDEAI Y+K
Sbjct: 246 KKNISGSSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNKSDKASMLDEAIDYLK 305
Query: 163 FLKRQIRLLQSNQCNIVG 180
L+ Q++ +Q Q +G
Sbjct: 306 SLQLQVQRVQLMQMMSMG 323
>gi|356503978|ref|XP_003520776.1| PREDICTED: uncharacterized protein LOC100804665 [Glycine max]
Length = 513
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 39/50 (78%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ + RREKI++K+R L+ L+P K+D ASMLD+AI Y+K LK Q++++
Sbjct: 333 LSEKKRREKINKKMRTLKELIPNCNKVDKASMLDDAIDYLKTLKLQLQIM 382
>gi|342298442|emb|CBY05411.1| ALCATRAZ-like protein [Aethionema carneum]
Length = 224
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ + RR KI+EK++ LQ+L+P K D ASMLDEAI Y+K L+ Q++ L
Sbjct: 111 LSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQAL 160
>gi|224134264|ref|XP_002327796.1| predicted protein [Populus trichocarpa]
gi|222836881|gb|EEE75274.1| predicted protein [Populus trichocarpa]
Length = 290
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKIS+K++ LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 211 DSHSLAERARREKISKKMKSLQDLVPGCNKITGRAGMLDEIINYVQSLQRQVEFL 265
>gi|356500459|ref|XP_003519049.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 378
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 87 EMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGT 146
EM+ +Q D P IR + + P+S+A R RR +ISE++R LQ LVP
Sbjct: 276 EMITMEKLLQFPDSVPCKIRAKRG----CATHPRSIAERVRRTRISERMRKLQELVPHMD 331
Query: 147 KM-DTASMLDEAIRYVKFLKRQIRLLQSNQCNI 178
K +TA MLD A+ Y+K L++Q + L + N
Sbjct: 332 KQTNTADMLDLAVEYIKDLQKQFKTLSEKRANC 364
>gi|15240202|ref|NP_201512.1| transcription factor ALC [Arabidopsis thaliana]
gi|75309083|sp|Q9FHA2.1|ALC_ARATH RecName: Full=Transcription factor ALC; AltName: Full=Basic
helix-loop-helix protein 73; Short=AtbHLH73; Short=bHLH
73; AltName: Full=Protein ALCATRAZ; AltName:
Full=Transcription factor EN 98; AltName: Full=bHLH
transcription factor bHLH073
gi|10177598|dbj|BAB10945.1| unnamed protein product [Arabidopsis thaliana]
gi|114050687|gb|ABI49493.1| At5g67110 [Arabidopsis thaliana]
gi|332010918|gb|AED98301.1| transcription factor ALC [Arabidopsis thaliana]
Length = 210
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ + RR KI+EK++ LQ+L+P K D ASMLDEAI Y+K L+ Q++ L
Sbjct: 100 LSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTL 149
>gi|224137582|ref|XP_002327162.1| predicted protein [Populus trichocarpa]
gi|222835477|gb|EEE73912.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 37/50 (74%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ + RR +I+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q+++L
Sbjct: 130 LSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 179
>gi|218201482|gb|EEC83909.1| hypothetical protein OsI_29959 [Oryza sativa Indica Group]
Length = 405
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RRE+IS+++++LQ LVPG K + A MLDE I YV+ L+RQ+ L
Sbjct: 213 DSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFL 267
>gi|326506812|dbj|BAJ91447.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510963|dbj|BAJ91829.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 353
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RRE+ISE++R LQ LVPG K+ A MLDE I YV+ L++Q+ L
Sbjct: 159 DSHSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQSLQKQVEFL 213
>gi|356545930|ref|XP_003541386.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 476
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 38/50 (76%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR++I+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q++++
Sbjct: 270 LSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 319
>gi|295913599|gb|ADG58045.1| transcription factor [Lycoris longituba]
Length = 229
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE+++ LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 88 SLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 139
>gi|225458663|ref|XP_002284880.1| PREDICTED: transcription factor SPATULA [Vitis vinifera]
gi|302142294|emb|CBI19497.3| unnamed protein product [Vitis vinifera]
Length = 369
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 37/50 (74%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ + RR +I+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q+++L
Sbjct: 194 LSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 243
>gi|34391435|gb|AAN18284.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 288
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
Query: 103 TTIRKPKRRNIRI----SDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEA 157
+ I+KP ++R + D S+A R RREKIS+K++ LQ +VPG K+ A MLDE
Sbjct: 115 SEIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEI 174
Query: 158 IRYVKFLKRQIRLL 171
I YV+ L++Q+ L
Sbjct: 175 INYVQSLQQQVEFL 188
>gi|115477387|ref|NP_001062289.1| Os08g0524800 [Oryza sativa Japonica Group]
gi|29647487|dbj|BAC75416.1| bHLH transcription factor(GBOF-1)-like [Oryza sativa Japonica
Group]
gi|113624258|dbj|BAF24203.1| Os08g0524800 [Oryza sativa Japonica Group]
Length = 405
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RRE+IS+++++LQ LVPG K + A MLDE I YV+ L+RQ+ L
Sbjct: 213 DSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFL 267
>gi|356501423|ref|XP_003519524.1| PREDICTED: transcription factor PIF4-like [Glycine max]
Length = 562
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 38/49 (77%)
Query: 123 AARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
+ R RR++I+EK+R LQ+L+P K D ASML+EAI Y+K L+ Q++++
Sbjct: 368 SERRRRDRINEKMRTLQQLIPNSNKTDKASMLEEAIEYLKSLQFQLQVM 416
>gi|4006909|emb|CAB16839.1| putative protein [Arabidopsis thaliana]
gi|7270602|emb|CAB80320.1| putative protein [Arabidopsis thaliana]
Length = 300
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 5/72 (6%)
Query: 105 IRKPKRRNIRI----SDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIR 159
I+KP ++R + D S+A R RREKIS+K++ LQ +VPG K+ A MLDE I
Sbjct: 129 IQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIIN 188
Query: 160 YVKFLKRQIRLL 171
YV+ L++Q+ L
Sbjct: 189 YVQSLQQQVEFL 200
>gi|323388953|gb|ADX60281.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 405
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RRE+IS+++++LQ LVPG K + A MLDE I YV+ L+RQ+ L
Sbjct: 213 DSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFL 267
>gi|356495472|ref|XP_003516601.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 375
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 37/50 (74%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ + RR +I+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q+++L
Sbjct: 151 LSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 200
>gi|293333598|ref|NP_001167725.1| uncharacterized protein LOC100381413 [Zea mays]
gi|223943625|gb|ACN25896.1| unknown [Zea mays]
gi|414865638|tpg|DAA44195.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 211
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKI+E++++LQ LVPG K+ A MLDE I YV+ L+RQI L
Sbjct: 136 SLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIEFL 187
>gi|449531452|ref|XP_004172700.1| PREDICTED: uncharacterized protein LOC101229339 [Cucumis sativus]
Length = 379
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 37/50 (74%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ + RR +I+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q+++L
Sbjct: 203 MSEKRRRRRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 252
>gi|414865634|tpg|DAA44191.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 262
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKI+E++++LQ LVPG K+ A MLDE I YV+ L+RQI L
Sbjct: 110 SLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIEFL 161
>gi|302801726|ref|XP_002982619.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
gi|300149718|gb|EFJ16372.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
Length = 85
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR++I+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q+++L
Sbjct: 27 LSERRRRDRINEKMKALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQVL 76
>gi|414872588|tpg|DAA51145.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 209
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RR+KISE++++LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 43 SLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFL 94
>gi|21537215|gb|AAM61556.1| unknown [Arabidopsis thaliana]
Length = 288
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
Query: 103 TTIRKPKRRNIRI----SDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEA 157
+ I+KP ++R + D S+A R RREKIS+K++ LQ +VPG K+ A MLDE
Sbjct: 115 SEIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEI 174
Query: 158 IRYVKFLKRQIRLL 171
I YV+ L++Q+ L
Sbjct: 175 INYVQSLQQQVEFL 188
>gi|413933172|gb|AFW67723.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 284
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RR+KISE++++LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 118 SLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFL 169
>gi|21536863|gb|AAM61195.1| unknown [Arabidopsis thaliana]
Length = 210
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ + RR KI+EK++ LQ+L+P K D ASMLDEAI Y+K L+ Q++ L
Sbjct: 100 LSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTL 149
>gi|357141712|ref|XP_003572320.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 327
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A + RREKISE++++LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 160 SIAEKLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 211
>gi|326514032|dbj|BAJ92166.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 316
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RR+KISE++++LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 150 SLAERLRRKKISERMKLLQDLVPGCNKITGKAVMLDEIINYVQSLQRQVEFL 201
>gi|30678541|ref|NP_191916.3| transcription factor UNE10 [Arabidopsis thaliana]
gi|75299638|sp|Q8GZ38.1|UNE10_ARATH RecName: Full=Transcription factor UNE10; AltName: Full=Basic
helix-loop-helix protein 16; Short=AtbHLH16; Short=bHLH
16; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 10;
AltName: Full=Transcription factor EN 108; AltName:
Full=bHLH transcription factor bHLH016
gi|26449558|dbj|BAC41905.1| putative bHLH transcription factor bHLH016 [Arabidopsis thaliana]
gi|109134123|gb|ABG25060.1| At4g00050 [Arabidopsis thaliana]
gi|332656418|gb|AEE81818.1| transcription factor UNE10 [Arabidopsis thaliana]
Length = 399
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
R RR+KI+++++ LQ+LVP +K D ASMLDE I Y+K L+ Q+ ++
Sbjct: 223 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMM 269
>gi|238005608|gb|ACR33839.1| unknown [Zea mays]
gi|413938469|gb|AFW73020.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 246
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRL 170
D S+A R RRE+ISE++R LQ LVPG +K+ A MLDE I YV+ L++Q+ +
Sbjct: 155 DSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEV 208
>gi|255538250|ref|XP_002510190.1| conserved hypothetical protein [Ricinus communis]
gi|223550891|gb|EEF52377.1| conserved hypothetical protein [Ricinus communis]
Length = 312
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 37/50 (74%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ + RR +I+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q+++L
Sbjct: 132 LSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 181
>gi|225424017|ref|XP_002279412.1| PREDICTED: transcription factor bHLH75 [Vitis vinifera]
Length = 258
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKI+EK+R LQ LVPG K M A MLD I YV+ L+ QI L
Sbjct: 149 DSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQSLQNQIEFL 203
>gi|15234436|ref|NP_195372.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|75305715|sp|Q93VJ4.1|BEE2_ARATH RecName: Full=Transcription factor BEE 2; AltName: Full=Basic
helix-loop-helix protein 58; Short=AtbHLH58; Short=bHLH
58; AltName: Full=Protein Brassinosteroid enhanced
expression 2; AltName: Full=Transcription factor EN 80;
AltName: Full=bHLH transcription factor bHLH058
gi|13877937|gb|AAK44046.1|AF370231_1 unknown protein [Arabidopsis thaliana]
gi|16323468|gb|AAL15228.1| unknown protein [Arabidopsis thaliana]
gi|332661269|gb|AEE86669.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 304
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
Query: 103 TTIRKPKRRNIRI----SDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEA 157
+ I+KP ++R + D S+A R RREKIS+K++ LQ +VPG K+ A MLDE
Sbjct: 131 SEIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEI 190
Query: 158 IRYVKFLKRQIRLL 171
I YV+ L++Q+ L
Sbjct: 191 INYVQSLQQQVEFL 204
>gi|449526183|ref|XP_004170093.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH122-like
[Cucumis sativus]
Length = 437
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSN--Q 175
P+S+A R RR KISE++R LQ LVP K +T+ MLD A+ Y+K L++Q++ L N +
Sbjct: 369 PRSIAERVRRTKISERMRKLQELVPNMDKQTNTSDMLDLAVEYIKGLQKQVQTLSDNRAK 428
Query: 176 CNIVGDDH 183
C H
Sbjct: 429 CKCSHSQH 436
>gi|449442685|ref|XP_004139111.1| PREDICTED: transcription factor bHLH122-like [Cucumis sativus]
Length = 437
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSN--Q 175
P+S+A R RR KISE++R LQ LVP K +T+ MLD A+ Y+K L++Q++ L N +
Sbjct: 369 PRSIAERVRRTKISERMRKLQELVPNMDKQTNTSDMLDLAVEYIKGLQKQVQTLSDNRAK 428
Query: 176 CNIVGDDH 183
C H
Sbjct: 429 CKCSHSQH 436
>gi|125562107|gb|EAZ07555.1| hypothetical protein OsI_29809 [Oryza sativa Indica Group]
Length = 403
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 95 MQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASM 153
+Q D P IR + + P+S+A R RR +ISE+IR LQ LVP K +TA M
Sbjct: 312 LQFQDAVPCKIRAKRG----CATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADM 367
Query: 154 LDEAIRYVKFLKRQIRLLQSNQCNIV 179
LD A+ Y+K L++Q++ L ++ N
Sbjct: 368 LDLAVDYIKDLQKQVKGLNDSRANCT 393
>gi|20127012|gb|AAM10933.1|AF488561_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 399
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
R RR+KI+++++ LQ+LVP +K D ASMLDE I Y+K L+ Q+ ++
Sbjct: 223 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMM 269
>gi|18403381|ref|NP_564583.1| transcription factor bHLH122 [Arabidopsis thaliana]
gi|75308807|sp|Q9C690.1|BH122_ARATH RecName: Full=Transcription factor bHLH122; AltName: Full=Basic
helix-loop-helix protein 122; Short=AtbHLH122;
Short=bHLH 122; AltName: Full=Transcription factor EN
70; AltName: Full=bHLH transcription factor bHLH122
gi|12320788|gb|AAG50543.1|AC079828_14 unknown protein [Arabidopsis thaliana]
gi|14334500|gb|AAK59447.1| unknown protein [Arabidopsis thaliana]
gi|17104811|gb|AAL34294.1| unknown protein [Arabidopsis thaliana]
gi|332194505|gb|AEE32626.1| transcription factor bHLH122 [Arabidopsis thaliana]
Length = 379
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPG-GTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
P+S+A R RR KISE++R LQ LVP T+ +TA MLD A++Y+K L+ Q++ L+ ++
Sbjct: 314 PRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQVKALEESRAR 373
Query: 178 I 178
Sbjct: 374 C 374
>gi|297737801|emb|CBI27002.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKI+EK+R LQ LVPG K M A MLD I YV+ L+ QI L
Sbjct: 132 DSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQSLQNQIEFL 186
>gi|15451016|gb|AAK96779.1| Unknown protein [Arabidopsis thaliana]
gi|23198360|gb|AAN15707.1| Unknown protein [Arabidopsis thaliana]
Length = 304
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
Query: 103 TTIRKPKRRNIRI----SDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEA 157
+ I+KP ++R + D S+A R RREKIS+K++ LQ +VPG K+ A MLDE
Sbjct: 131 SEIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEI 190
Query: 158 IRYVKFLKRQIRLL 171
I YV+ L++Q+ L
Sbjct: 191 INYVQSLQQQVEFL 204
>gi|356571031|ref|XP_003553685.1| PREDICTED: uncharacterized protein LOC100784724 [Glycine max]
Length = 518
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 50/75 (66%), Gaps = 4/75 (5%)
Query: 99 DIDPTTIRKPKRRNIRI--SDDPQ--SVAARHRREKISEKIRILQRLVPGGTKMDTASML 154
D +P + K R R+ S +P+ +++ + RREKI++K+R L+ L+P K+D ASML
Sbjct: 316 DGEPEDMVKQDREGNRVKRSRNPEVHNLSEKKRREKINKKMRTLKDLIPNCNKVDKASML 375
Query: 155 DEAIRYVKFLKRQIR 169
D+AI Y+K LK Q++
Sbjct: 376 DDAIDYLKTLKLQLQ 390
>gi|297795891|ref|XP_002865830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297311665|gb|EFH42089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE++R LQ LVPG K+ A MLDE I YV+ L+ Q+ L
Sbjct: 146 DSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQNQVEFL 200
>gi|20127056|gb|AAM10947.1|AF488591_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 304
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
Query: 103 TTIRKPKRRNIRI----SDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEA 157
+ I+KP ++R + D S+A R RREKIS+K++ LQ +VPG K+ A MLDE
Sbjct: 131 SEIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEI 190
Query: 158 IRYVKFLKRQIRLL 171
I YV+ L++Q+ L
Sbjct: 191 INYVQSLQQQVEFL 204
>gi|125545009|gb|EAY91148.1| hypothetical protein OsI_12756 [Oryza sativa Indica Group]
Length = 469
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR++I+EK+R LQ L+P K D ASMLDEAI Y+K L+ Q++++
Sbjct: 306 LSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMM 355
>gi|115479871|ref|NP_001063529.1| Os09g0487900 [Oryza sativa Japonica Group]
gi|113631762|dbj|BAF25443.1| Os09g0487900 [Oryza sativa Japonica Group]
Length = 401
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 5/71 (7%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL----QS 173
P+S+A R RR +ISE+IR LQ LVP K +TA MLD A+ Y+K L++Q+++L S
Sbjct: 329 PRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQVKVLNDSRSS 388
Query: 174 NQCNIVGDDHY 184
C+ H+
Sbjct: 389 CTCSASKQKHF 399
>gi|224082612|ref|XP_002306764.1| predicted protein [Populus trichocarpa]
gi|222856213|gb|EEE93760.1| predicted protein [Populus trichocarpa]
Length = 380
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR++I+EK+R LQ L+P K D ASMLDEAI Y+K L+ Q++++
Sbjct: 193 LSERRRRDRINEKMRALQELIPHCYKTDKASMLDEAIEYLKSLQLQLQVM 242
>gi|297802298|ref|XP_002869033.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297314869|gb|EFH45292.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 304
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
Query: 103 TTIRKPKRRNIRI----SDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEA 157
+ I+KP ++R + D S+A R RREKIS+K++ LQ +VPG K+ A MLDE
Sbjct: 131 SEIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEI 190
Query: 158 IRYVKFLKRQIRLL 171
I YV+ L++Q+ L
Sbjct: 191 INYVQSLQQQVEFL 204
>gi|30690689|ref|NP_849508.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|332661270|gb|AEE86670.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 302
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
Query: 103 TTIRKPKRRNIRI----SDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEA 157
+ I+KP ++R + D S+A R RREKIS+K++ LQ +VPG K+ A MLDE
Sbjct: 131 SEIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEI 190
Query: 158 IRYVKFLKRQIRLL 171
I YV+ L++Q+ L
Sbjct: 191 INYVQSLQQQVEFL 204
>gi|357167346|ref|XP_003581118.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 407
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RR++ISE++++LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 256 DSHSLAERVRRKRISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFL 310
>gi|326511035|dbj|BAJ91865.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 296
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 107 KPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKR 166
+P+ + R ++ +++ + RR KI+EK++ LQ LVP +K D ASMLD+AI Y+K L+
Sbjct: 43 RPRGKRARAAEV-HNLSEKRRRCKINEKMKALQSLVPNSSKTDKASMLDDAIEYLKHLQL 101
Query: 167 QIRLL 171
Q+++L
Sbjct: 102 QVQML 106
>gi|297794285|ref|XP_002865027.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
gi|297310862|gb|EFH41286.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
Query: 109 KRRNIRISDDPQ--SVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKR 166
+R +++ + D Q +++ + RR KI+EK++ LQ+L+P K D ASMLDEAI Y+K L+
Sbjct: 81 QRNSLKRTIDAQFHNLSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQL 140
Query: 167 QIRLL 171
Q++ L
Sbjct: 141 QVQTL 145
>gi|226505986|ref|NP_001147910.1| DNA binding protein [Zea mays]
gi|195614520|gb|ACG29090.1| DNA binding protein [Zea mays]
Length = 380
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSNQ-- 175
P+S+A R RR KISE+IR LQ LVP K +T+ MLD A+ Y+K L++Q++ L ++
Sbjct: 307 PRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQVKALNESRAS 366
Query: 176 CNIVGDDHYNKLS 188
C H + S
Sbjct: 367 CTCPASKHQQRFS 379
>gi|115455729|ref|NP_001051465.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|108711401|gb|ABF99196.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108711403|gb|ABF99198.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549936|dbj|BAF13379.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|215740666|dbj|BAG97322.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 410
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 38/50 (76%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR++I+EK+R LQ L+P K D AS+LDEAI Y+K L+ Q++++
Sbjct: 227 LSERRRRDRINEKMRALQELIPHCNKTDKASILDEAIEYLKSLQMQVQIM 276
>gi|108711402|gb|ABF99197.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 421
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 38/50 (76%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR++I+EK+R LQ L+P K D AS+LDEAI Y+K L+ Q++++
Sbjct: 238 LSERRRRDRINEKMRALQELIPHCNKTDKASILDEAIEYLKSLQMQVQIM 287
>gi|356541789|ref|XP_003539355.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 381
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 37/50 (74%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ + RR +I+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q+++L
Sbjct: 147 LSEKRRRGRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 196
>gi|54306640|gb|AAV33474.1| basic helix-loop-helix protein [Fragaria x ananassa]
Length = 298
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 37/50 (74%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ + RR +I+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q+++L
Sbjct: 151 LSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 200
>gi|125564183|gb|EAZ09563.1| hypothetical protein OsI_31842 [Oryza sativa Indica Group]
Length = 400
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 5/71 (7%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL----QS 173
P+S+A R RR +ISE+IR LQ LVP K +TA MLD A+ Y+K L++Q+++L S
Sbjct: 328 PRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQVKVLNDSRSS 387
Query: 174 NQCNIVGDDHY 184
C+ H+
Sbjct: 388 CTCSASKQKHF 398
>gi|226498378|ref|NP_001148110.1| BHLH transcription factor [Zea mays]
gi|195615854|gb|ACG29757.1| BHLH transcription factor [Zea mays]
Length = 403
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RRE+IS+++++LQ LVPG K + A MLDE I YV+ L+RQ+ L
Sbjct: 203 DSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFL 257
>gi|295881692|gb|ADG56590.1| ALCATRAZ/SPATULA-like protein [Prunus persica]
Length = 386
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 18/122 (14%)
Query: 50 PSSSTLLFGDHNNNNNNNNIIDQEEDEEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPK 109
P+ S+ FG N + E D E EE L A+ E P R
Sbjct: 111 PNVSSSSFGASENETD-------EYDCESEEGLEALVE---------EAAGKPGCGRSSS 154
Query: 110 RRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIR 169
+R+ + + +++ + RR +I+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q++
Sbjct: 155 KRSR--AAEVHNMSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQ 212
Query: 170 LL 171
+L
Sbjct: 213 ML 214
>gi|224100187|ref|XP_002311780.1| predicted protein [Populus trichocarpa]
gi|222851600|gb|EEE89147.1| predicted protein [Populus trichocarpa]
Length = 268
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ILQ +VPG K+ A +LDE I Y++ L+RQ+ L
Sbjct: 150 DSHSLAERARREKISERMKILQDIVPGCNKVTGKALVLDEIINYIQSLQRQVEFL 204
>gi|222630134|gb|EEE62266.1| hypothetical protein OsJ_17053 [Oryza sativa Japonica Group]
Length = 404
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 37/47 (78%)
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
R RR++I+EK+R LQ L+P K+D ASML+EAI Y+K L+ Q++++
Sbjct: 224 RRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMM 270
>gi|357509815|ref|XP_003625196.1| Transcription factor bHLH60 [Medicago truncatula]
gi|124360133|gb|ABN08149.1| Helix-loop-helix DNA-binding [Medicago truncatula]
gi|355500211|gb|AES81414.1| Transcription factor bHLH60 [Medicago truncatula]
Length = 340
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMD-TASMLDEAIRYVKFLKRQIRLLQSNQC 176
D S+A R RREKI+ ++++LQ LVPG K+ TA +LDE I +V+ L+RQ+ +L
Sbjct: 182 DSHSLAERARREKINARMKLLQELVPGCEKISGTALVLDEIINHVQTLQRQVEILSMKLA 241
Query: 177 NIVGDDHYNKLSLGATTNTTIATTTASASAAGALDPILGHSLPFHGNR 224
+ +N L A +++ + ++ + P++ +P + NR
Sbjct: 242 AVNPRIDFNLDRLLAADGSSLMDSNLPST---MVTPLVWPEMPLNSNR 286
>gi|357148389|ref|XP_003574744.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 377
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 95 MQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASM 153
+Q D P IR + + P+S+A R RR +ISE+IR LQ LVP K +TA M
Sbjct: 290 LQFQDAVPCKIRAKRG----CATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADM 345
Query: 154 LDEAIRYVKFLKRQIRLLQSNQCNIV 179
LD A+ Y+K L+ Q++++ ++ N
Sbjct: 346 LDLAVDYIKELQEQVKVINESRANCT 371
>gi|242033101|ref|XP_002463945.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
gi|241917799|gb|EER90943.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
Length = 315
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RR+KISE++++LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 150 SLAERLRRKKISERMKLLQDLVPGCNKITGKAVMLDEIINYVQSLQRQVEFL 201
>gi|222623520|gb|EEE57652.1| hypothetical protein OsJ_08085 [Oryza sativa Japonica Group]
Length = 300
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RRE+ISE++R LQ LVPG K+ A MLDE I YV+ L++Q+ L
Sbjct: 173 DSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEFL 227
>gi|115477188|ref|NP_001062190.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|42408931|dbj|BAD10188.1| putative transcription factor RAU1 [Oryza sativa Japonica Group]
gi|113624159|dbj|BAF24104.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|125603951|gb|EAZ43276.1| hypothetical protein OsJ_27873 [Oryza sativa Japonica Group]
gi|215712322|dbj|BAG94449.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 399
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Query: 95 MQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASM 153
+Q D P IR + + P+S+A R RR +ISE+IR LQ LVP K +TA M
Sbjct: 308 LQFQDAVPCKIRAKRG----CATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADM 363
Query: 154 LDEAIRYVKFLKRQIRLLQSNQCNIVGDDHYNKLS 188
LD A+ Y+K L++Q++ L ++ N + + S
Sbjct: 364 LDLAVDYIKDLQKQVKGLNDSRANCTCSAKHQQYS 398
>gi|414869403|tpg|DAA47960.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 380
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSNQ-- 175
P+S+A R RR KISE+IR LQ LVP K +T+ MLD A+ Y+K L++Q++ L ++
Sbjct: 307 PRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQVKALNESRAS 366
Query: 176 CNIVGDDHYNKLS 188
C H + S
Sbjct: 367 CTCPASKHQQRFS 379
>gi|147773703|emb|CAN76460.1| hypothetical protein VITISV_010828 [Vitis vinifera]
Length = 237
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKI+EK+R LQ LVPG K M A MLD I YV+ L+ QI L
Sbjct: 128 DSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQSLQNQIEFL 182
>gi|242066894|ref|XP_002454736.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
gi|241934567|gb|EES07712.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
Length = 277
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 101 DPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRY 160
DP +P+ + R ++ +++ + RR +I+EK++ LQ L+P +K D ASMLD+AI Y
Sbjct: 33 DPARPARPRGKRSRAAEV-HNLSEKRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEY 91
Query: 161 VKFLKRQIRLL 171
+K L+ Q+++L
Sbjct: 92 LKQLQLQVQML 102
>gi|356538931|ref|XP_003537954.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 418
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 95 MQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASM 153
+Q D P IR + + P+S+A R RR KISE++R LQ LVP K +TA M
Sbjct: 330 LQLSDSVPCKIRAKRG----CATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADM 385
Query: 154 LDEAIRYVKFLKRQIRLLQSNQCNIV 179
LD A+ Y+K L+ Q++ L N+
Sbjct: 386 LDLAVEYIKDLQNQVQTLSDNRAKCT 411
>gi|242092116|ref|XP_002436548.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
gi|241914771|gb|EER87915.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
Length = 291
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ + RR KI+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q+++L
Sbjct: 90 LSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 139
>gi|297819388|ref|XP_002877577.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
gi|297323415|gb|EFH53836.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
Length = 260
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLLQSNQC 176
D S+A R RREKISE+++ LQ L+PG K + A +LDE I Y++ L+RQ+ L S +
Sbjct: 149 DRHSLAERARREKISERMKFLQDLIPGCNKIIGKALVLDEIINYIQSLQRQVEFL-SMKL 207
Query: 177 NIVGDDHYNKLSLG 190
IV D N +G
Sbjct: 208 EIVNSDVSNGPKVG 221
>gi|414865635|tpg|DAA44192.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 185
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKI+E++++LQ LVPG K+ A MLDE I YV+ L+RQI L
Sbjct: 110 SLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIEFL 161
>gi|297852830|ref|XP_002894296.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297340138|gb|EFH70555.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 378
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPG-GTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
P+S+A R RR KISE++R LQ LVP T+ +TA MLD A++Y+K L+ Q++ L+ +
Sbjct: 313 PRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQVKTLEETRAR 372
Query: 178 I 178
Sbjct: 373 C 373
>gi|388504966|gb|AFK40549.1| unknown [Medicago truncatula]
Length = 278
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D +A R RREKISE+++ILQ LVPG K + A +LDE I Y++ L+RQ+ L
Sbjct: 160 DSHGLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 214
>gi|356562791|ref|XP_003549652.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 229
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 84/165 (50%), Gaps = 24/165 (14%)
Query: 18 SSSSPSL---WPSFNNFPLQTNTQILPSSSRHIIQPSSSTLLFGDHNNNNNNNNIIDQEE 74
SS++PSL WPS +FP T PS+ RH+ PS+ D +N + + +
Sbjct: 12 SSANPSLSEIWPS--HFP----TDHTPSNKRHL-SPST------DCGSNKHIKSSGSGSQ 58
Query: 75 DEEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRN---IRI----SDDPQSVAARHR 127
D+ + G + + P++ +P +++ +R + D S+A R R
Sbjct: 59 DQNGALKAGEVDATSVAGNKLPEQTAKPSSSEQPPKQDYIHVRARRGQATDSHSLAERAR 118
Query: 128 REKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
REKISE+++ILQ +VPG K + A +LDE I Y++ L+ Q+ L
Sbjct: 119 REKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQVEFL 163
>gi|50509096|dbj|BAD30156.1| putative bHLH protein [Oryza sativa Japonica Group]
Length = 268
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ILQ LVPG K + AS+LDE I Y++ L+ Q+ +
Sbjct: 137 DSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQVEFM 191
>gi|224107851|ref|XP_002314625.1| predicted protein [Populus trichocarpa]
gi|222863665|gb|EEF00796.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ILQ LVPG K + A +LDE I Y++ L+RQ+ L
Sbjct: 83 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 137
>gi|414865636|tpg|DAA44193.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 275
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKI+E++++LQ LVPG K+ A MLDE I YV+ L+RQI L
Sbjct: 140 SLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIEFL 191
>gi|110741191|dbj|BAF02146.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 366
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE++R+LQ L PG K+ A MLDE I YV+ L++Q+ L
Sbjct: 218 SLAERVRREKISERMRLLQELAPGCNKITGKAVMLDEIINYVQSLQQQVEFL 269
>gi|302804013|ref|XP_002983759.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
gi|300148596|gb|EFJ15255.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
Length = 89
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 37/49 (75%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRL 170
++ R RR++I+EK+R LQ L+P K D ASMLDEAI Y+K L+ Q+++
Sbjct: 24 LSERRRRDRINEKMRALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQV 72
>gi|356574149|ref|XP_003555214.1| PREDICTED: transcription factor ABORTED MICROSPORES-like [Glycine
max]
Length = 529
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 73 EEDEEPEEELGAMKEMMYRIAAMQPVDI--DPTTIRKPKRRNIRISDDPQSVAARHRREK 130
E E+ EE+ +K ++ R +M + K +RRN + + VA R RR+K
Sbjct: 246 EAKEKQEEDKDLLKNVVGRSDSMSDCSDQNEEEEDGKYRRRNGKGNQSKNLVAERKRRKK 305
Query: 131 ISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
+++++ L+ LVP +K+D AS+L +AI YVK L++Q++ LQ
Sbjct: 306 LNDRLYNLRSLVPRISKLDRASILGDAIEYVKDLQKQVKELQ 347
>gi|242082133|ref|XP_002445835.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
gi|241942185|gb|EES15330.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
Length = 397
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RRE+IS+++++LQ LVPG K + A MLDE I YV+ L+RQ+ L
Sbjct: 202 DSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFL 256
>gi|222625912|gb|EEE60044.1| hypothetical protein OsJ_12829 [Oryza sativa Japonica Group]
Length = 489
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 38/50 (76%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR++I+EK+R LQ L+P K D AS+LDEAI Y+K L+ Q++++
Sbjct: 327 LSERRRRDRINEKMRALQELIPHCNKTDKASILDEAIEYLKSLQMQVQIM 376
>gi|212721436|ref|NP_001132323.1| uncharacterized protein LOC100193765 [Zea mays]
gi|194694078|gb|ACF81123.1| unknown [Zea mays]
gi|414869584|tpg|DAA48141.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 404
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RRE+IS+++++LQ LVPG K + A MLDE I YV+ L+RQ+ L
Sbjct: 203 DSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFL 257
>gi|302766193|ref|XP_002966517.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
gi|302801203|ref|XP_002982358.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300149950|gb|EFJ16603.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300165937|gb|EFJ32544.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
Length = 102
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 25 DSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 79
>gi|212720610|ref|NP_001131794.1| uncharacterized protein LOC100193167 [Zea mays]
gi|194692562|gb|ACF80365.1| unknown [Zea mays]
gi|413953032|gb|AFW85681.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ + RR KI+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q+++L
Sbjct: 112 LSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 161
>gi|242042934|ref|XP_002459338.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
gi|241922715|gb|EER95859.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
Length = 446
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 36/47 (76%)
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
R RR++I+EK+R LQ LVP K D AS+LDEAI Y+K L+ Q++++
Sbjct: 258 RRRRDRINEKMRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQIM 304
>gi|218193849|gb|EEC76276.1| hypothetical protein OsI_13762 [Oryza sativa Indica Group]
Length = 505
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 38/50 (76%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR++I+EK+R LQ L+P K D AS+LDEAI Y+K L+ Q++++
Sbjct: 343 LSERRRRDRINEKMRALQELIPHCNKTDKASILDEAIEYLKSLQMQVQIM 392
>gi|413917616|gb|AFW57548.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 505
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 98 VDIDPTTIRKPKRRNIRISDDPQ--SVAARHRREKISEKIRILQRLVPGGTKMDTASMLD 155
+D +P R+ R+ + + +++ R RR++I+EK+R LQ L+P K+D +SML+
Sbjct: 303 LDDEPGATRRSAARSAKRCRTAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKSSMLE 362
Query: 156 EAIRYVKFLKRQIRLL 171
EAI Y+K L+ Q++++
Sbjct: 363 EAIEYLKTLQLQVQMM 378
>gi|326501126|dbj|BAJ98794.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 38/51 (74%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
+A R RREK+SE+ L ++VPG KMD AS+L +AI+YVK L+ Q++ ++
Sbjct: 168 LAERKRREKLSERFIALSKIVPGLKKMDKASVLGDAIKYVKTLQEQVKGME 218
>gi|255648089|gb|ACU24499.1| unknown [Glycine max]
Length = 229
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 84/165 (50%), Gaps = 24/165 (14%)
Query: 18 SSSSPSL---WPSFNNFPLQTNTQILPSSSRHIIQPSSSTLLFGDHNNNNNNNNIIDQEE 74
SS++PSL WPS +FP T PS+ RH+ S ST D +N + + +
Sbjct: 12 SSANPSLSEIWPS--HFP----TDHTPSNKRHL---SPST----DCGSNKHIKSSGSGSQ 58
Query: 75 DEEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRN---IRI----SDDPQSVAARHR 127
D+ + G + + P++ +P +++ +R + D S+A R R
Sbjct: 59 DQNGALKAGEVDATSVAGNKLPEQTAKPSSSEQPPKQDYIHVRARRGQATDSHSLAERAR 118
Query: 128 REKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
REKISE+++ILQ +VPG K + A +LDE I Y++ L+ Q+ L
Sbjct: 119 REKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQVEFL 163
>gi|223950211|gb|ACN29189.1| unknown [Zea mays]
gi|414869585|tpg|DAA48142.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 401
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RRE+IS+++++LQ LVPG K + A MLDE I YV+ L+RQ+ L
Sbjct: 203 DSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFL 257
>gi|255583282|ref|XP_002532405.1| DNA binding protein, putative [Ricinus communis]
gi|223527901|gb|EEF29990.1| DNA binding protein, putative [Ricinus communis]
Length = 355
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
P+S+A R RR +ISE++R LQ LVP K +TA MLD A+ Y+K L++Q + L N+ N
Sbjct: 281 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQYKTLSDNRAN 340
Query: 178 I 178
Sbjct: 341 C 341
>gi|449533777|ref|XP_004173848.1| PREDICTED: transcription factor BPE-like, partial [Cucumis sativus]
Length = 174
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ILQ LVPG K + A +LDE I Y++ L+RQ+ L
Sbjct: 56 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 110
>gi|242037911|ref|XP_002466350.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
gi|241920204|gb|EER93348.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
Length = 424
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 102 PTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYV 161
P+ PKRR + + +++ R RR++I+EK+R LQ L+P K D AS+LDE I Y+
Sbjct: 219 PSRRHGPKRRTR--AAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASILDETIEYL 276
Query: 162 KFLKRQIRLL 171
K L+ Q++++
Sbjct: 277 KSLQMQVQIM 286
>gi|7267277|emb|CAB81059.1| putative protein [Arabidopsis thaliana]
Length = 296
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 45/71 (63%)
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNIVGDDHY 184
+ R+EK+ ++I LQ+LV K DTAS+L+EA+ Y+KFL+ Q+ +L + + N +G
Sbjct: 171 KVRKEKLGDRITALQQLVSPFGKTDTASVLNEAVEYIKFLQEQVTVLSNPEQNTIGSVQQ 230
Query: 185 NKLSLGATTNT 195
+ S + NT
Sbjct: 231 QQCSNKKSINT 241
>gi|125606147|gb|EAZ45183.1| hypothetical protein OsJ_29826 [Oryza sativa Japonica Group]
Length = 379
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 9/95 (9%)
Query: 95 MQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASM 153
+Q D P IR + + P+S+A R RR +ISE+IR LQ LVP K +TA M
Sbjct: 287 LQFQDAVPCKIRAKRG----CATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADM 342
Query: 154 LDEAIRYVKFLKRQIRLL----QSNQCNIVGDDHY 184
LD A+ Y+K L++Q+++L S C+ H+
Sbjct: 343 LDLAVDYIKELQKQVKVLNDSRSSCTCSASKQKHF 377
>gi|356537351|ref|XP_003537191.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 384
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 87 EMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGT 146
EM+ +Q D P IR + + P+S+A R RR +ISE++R LQ LVP
Sbjct: 282 EMITMKKLLQFPDSVPCKIRAKRG----CATHPRSIAERVRRTRISERMRKLQELVPNMD 337
Query: 147 KM-DTASMLDEAIRYVKFLKRQIRLL 171
K +TA MLD A+ Y+K L++Q + L
Sbjct: 338 KQTNTADMLDLAVEYIKDLQKQFKTL 363
>gi|218563528|sp|Q9M0X8.2|BH114_ARATH RecName: Full=Transcription factor bHLH114; AltName: Full=Basic
helix-loop-helix protein 114; Short=AtbHLH114;
Short=bHLH 114; AltName: Full=Transcription factor EN
65; AltName: Full=bHLH transcription factor bHLH114
Length = 298
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 44/69 (63%)
Query: 127 RREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNIVGDDHYNK 186
R+EK+ ++I LQ+LV K DTAS+L+EA+ Y+KFL+ Q+ +L + + N +G +
Sbjct: 175 RKEKLGDRITALQQLVSPFGKTDTASVLNEAVEYIKFLQEQVTVLSNPEQNTIGSVQQQQ 234
Query: 187 LSLGATTNT 195
S + NT
Sbjct: 235 CSNKKSINT 243
>gi|339716188|gb|AEJ88333.1| putative MYC protein [Tamarix hispida]
Length = 160
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSNQ 175
P+S+A R RR +IS++IR LQ LVP K +TA ML+EA+ YVK L++QI L +Q
Sbjct: 94 PRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKGLQKQIEELMEHQ 151
>gi|23495742|dbj|BAC19953.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
gi|24059945|dbj|BAC21408.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
Length = 417
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR++I+EK+R LQ LVP K D AS+LDEAI Y+K L+ Q++++
Sbjct: 235 LSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQIM 284
>gi|359494803|ref|XP_003634844.1| PREDICTED: transcription factor bHLH74-like [Vitis vinifera]
gi|296090643|emb|CBI41042.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RRE+ISE+++ LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 258 SLAERVRRERISERMKFLQDLVPGCNKITGKAVMLDEIINYVQSLQRQVEFL 309
>gi|255547289|ref|XP_002514702.1| DNA binding protein, putative [Ricinus communis]
gi|223546306|gb|EEF47808.1| DNA binding protein, putative [Ricinus communis]
Length = 440
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
R RR++I++K++ LQ+LVP +K D ASMLDE I Y+K L+ Q++ +
Sbjct: 257 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIEYLKQLQAQVQAM 303
>gi|224094803|ref|XP_002310242.1| predicted protein [Populus trichocarpa]
gi|222853145|gb|EEE90692.1| predicted protein [Populus trichocarpa]
Length = 108
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKIS+K++ LQ LVPG K+ A MLDE I YV+ L+RQ+ +
Sbjct: 46 DSHSLAERARREKISKKMKCLQDLVPGCNKITGRAGMLDEIINYVQSLQRQVEFI 100
>gi|115479977|ref|NP_001063582.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|113631815|dbj|BAF25496.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|125606227|gb|EAZ45263.1| hypothetical protein OsJ_29905 [Oryza sativa Japonica Group]
gi|215765178|dbj|BAG86875.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKIS+++++LQ LVPG K + A MLDE I YV+ L++Q+ L
Sbjct: 183 DSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFL 237
>gi|356506557|ref|XP_003522046.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 397
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 38/47 (80%)
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
R RR+KI+++++ LQ+LVP +K D ASMLDE I+Y+K L+ Q++++
Sbjct: 244 RRRRDKINQRMKELQKLVPNSSKTDKASMLDEVIQYMKQLQAQVQMM 290
>gi|125564259|gb|EAZ09639.1| hypothetical protein OsI_31923 [Oryza sativa Indica Group]
Length = 366
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKIS+++++LQ LVPG K + A MLDE I YV+ L++Q+ L
Sbjct: 183 DSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFL 237
>gi|413918730|gb|AFW58662.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 223
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 66/120 (55%), Gaps = 10/120 (8%)
Query: 65 NNNNIIDQEEDEEPEEELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAA 124
NN++IID + E + G KEM A + + D R +R + P+S+A
Sbjct: 106 NNDDIIDNISNSY-ELQFGVAKEM----AGLLQMQQDQVPFRVRAKRGC--ATHPRSIAE 158
Query: 125 RHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSN--QCNIVGD 181
R RR +ISEK+R LQ LVP K TA MLD A+ +++ L+ +++ L+ + +C+ G+
Sbjct: 159 RERRTRISEKLRKLQALVPNMDKQTSTADMLDLAVDHIRGLQNELQALKKDKEKCSCRGN 218
>gi|359744468|gb|AEV57494.1| rice phytochrome-interacting factor 4 [Oryza sativa Japonica Group]
Length = 414
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR++I+EK+R LQ LVP K D AS+LDEAI Y+K L+ Q++++
Sbjct: 232 LSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQIM 281
>gi|357152259|ref|XP_003576061.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 211
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE++++LQ LVP K+ A MLDE I YV+ L+RQ+ L
Sbjct: 41 DSHSLAERVRREKISERMKLLQDLVPSCNKVTGKAVMLDEIINYVQSLQRQVEFL 95
>gi|116787273|gb|ABK24441.1| unknown [Picea sitchensis]
Length = 320
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE++++LQ LVPG K+ A MLDE I YV+ L+ Q+ L
Sbjct: 131 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAVMLDEIINYVQALQCQVEFL 185
>gi|4580456|gb|AAD24380.1| unknown protein [Arabidopsis thaliana]
Length = 490
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 38/50 (76%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR++I+E+++ LQ L+P K D ASMLDEAI Y+K L+ QI+++
Sbjct: 291 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMM 340
>gi|30680909|ref|NP_179608.2| transcription factor PIF1 [Arabidopsis thaliana]
gi|334184322|ref|NP_001189559.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|75299660|sp|Q8GZM7.1|PIF1_ARATH RecName: Full=Transcription factor PIF1; AltName: Full=Basic
helix-loop-helix protein 15; Short=AtbHLH15; Short=bHLH
15; AltName: Full=Protein PHY-INTERACTING FACTOR 1;
AltName: Full=Protein PHYTOCHROME INTERACTING FACTOR
3-LIKE 5; AltName: Full=Transcription factor EN 101;
AltName: Full=bHLH transcription factor bHLH015
gi|26051284|gb|AAN78308.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|28372351|dbj|BAC56979.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|330251883|gb|AEC06977.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|330251885|gb|AEC06979.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 478
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 38/50 (76%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR++I+E+++ LQ L+P K D ASMLDEAI Y+K L+ QI+++
Sbjct: 291 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMM 340
>gi|18419937|ref|NP_568010.1| transcription factor SPATULA [Arabidopsis thaliana]
gi|75309699|sp|Q9FUA4.1|SPT_ARATH RecName: Full=Transcription factor SPATULA; AltName: Full=Basic
helix-loop-helix protein 24; Short=AtbHLH24; Short=bHLH
24; AltName: Full=Transcription factor EN 99; AltName:
Full=bHLH transcription factor bHLH024
gi|11245494|gb|AAG33640.1|AF319540_1 SPATULA [Arabidopsis thaliana]
gi|110738410|dbj|BAF01131.1| putative bHLH transcription factor (AtbHLH024) / SPATULA (SPT)
[Arabidopsis thaliana]
gi|111074392|gb|ABH04569.1| At4g36930 [Arabidopsis thaliana]
gi|332661320|gb|AEE86720.1| transcription factor SPATULA [Arabidopsis thaliana]
Length = 373
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 8/111 (7%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL-QSNQCNIVG 180
++ + RR +I+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q+++L N N+
Sbjct: 204 LSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRNGINL-- 261
Query: 181 DDHYNKLSLGATTNTTIATTTASASAAGALDPILGHSLPFHGNRNSSFYFN 231
+ L L TT + + A DP+L H+ F N+ N
Sbjct: 262 ----HPLCLPGTTLHPLQLSQIRPPEATN-DPLLNHTNQFASTSNAPEMIN 307
>gi|302788881|ref|XP_002976209.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
gi|300155839|gb|EFJ22469.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
Length = 512
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%), Gaps = 7/61 (11%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTK-------MDTASMLDEAIRYVKFLKRQIRLL 171
P+S+A R RR +ISE++R LQ LVP K +T+ MLDEA+ Y+KFL++Q+ L
Sbjct: 426 PRSIAERVRRTRISERMRRLQELVPNMDKSLAVIQQTNTSDMLDEAVEYMKFLQKQVDDL 485
Query: 172 Q 172
Q
Sbjct: 486 Q 486
>gi|224120208|ref|XP_002330991.1| predicted protein [Populus trichocarpa]
gi|222872921|gb|EEF10052.1| predicted protein [Populus trichocarpa]
Length = 355
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
P+S+A R RR +ISE++R LQ LVP K +TA MLD A+ Y+K L++Q + L N+ N
Sbjct: 281 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVVYIKDLQKQYKTLSDNRAN 340
Query: 178 I 178
Sbjct: 341 C 341
>gi|356553958|ref|XP_003545317.1| PREDICTED: transcription factor ALC-like [Glycine max]
Length = 181
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ + RR +I+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q++ L
Sbjct: 132 LSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQYL 181
>gi|356544541|ref|XP_003540708.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 415
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 95 MQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASM 153
+Q D P IR + + P+S+A R RR KISE++R LQ LVP K +TA M
Sbjct: 327 LQLSDSVPCKIRAKRG----CATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADM 382
Query: 154 LDEAIRYVKFLKRQIRLLQSNQCNIV 179
LD A+ Y+K L+ Q+ L N+
Sbjct: 383 LDLAVEYIKDLQNQVEALSDNRAKCT 408
>gi|27311243|gb|AAO00689.1| Hypothetical protein [Oryza sativa Japonica Group]
Length = 776
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/97 (39%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 79 EEELGAM--KEMMYRIAAMQPVDIDPTTIRKPKRRNIR-ISDDPQSVAARHRREKISEKI 135
+EE G M +E+ A + D D + R R + + S+A R RREKI+E++
Sbjct: 595 QEETGEMPQRELSMEHAGEKAGDADASREEYVHVRAKRGQATNSHSLAERFRREKINERM 654
Query: 136 RILQRLVPGGTKMD-TASMLDEAIRYVKFLKRQIRLL 171
++LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 655 KLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFL 691
>gi|357117240|ref|XP_003560380.1| PREDICTED: transcription factor bHLH25-like [Brachypodium
distachyon]
Length = 349
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 38/51 (74%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
+A R RREK+SE+ L ++VPG KMD AS+L +AI+YVK L+ Q++ ++
Sbjct: 170 LAERKRREKLSERFIALSKIVPGLKKMDKASVLGDAIKYVKTLQDQVKGME 220
>gi|356500809|ref|XP_003519223.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 255
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ILQ LVPG K + A +LDE I Y++ L+RQ+ L
Sbjct: 137 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 191
>gi|449439405|ref|XP_004137476.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449531561|ref|XP_004172754.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 278
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D SVA R RR KI+E++R LQ +VPG K M A MLDE I YV+ L+ Q+ L
Sbjct: 162 DSHSVAERIRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFL 216
>gi|5923912|gb|AAD56411.1|AF185269_1 bHLH transcription factor GBOF-1 [Tulipa gesneriana]
Length = 321
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE++++LQ LVPG K+ A MLDE I YV+ L+ Q+ L
Sbjct: 144 DSHSLAERVRREKISERMKLLQALVPGCDKVTGKAVMLDEIINYVQSLQNQVEFL 198
>gi|357165982|ref|XP_003580559.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 198
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%)
Query: 116 SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
S D + + R RR++I+EK++ LQ L+P TK D SMLDEAI Y+K L+ Q+++L
Sbjct: 21 SADFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQML 76
>gi|168027682|ref|XP_001766358.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682267|gb|EDQ68686.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 35/47 (74%)
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
R RR++I+EK+R LQ L+P K D ASMLDEAI Y+K L+ Q+++
Sbjct: 33 RRRRDRINEKMRALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQVC 79
>gi|356495899|ref|XP_003516808.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 458
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 37/47 (78%)
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
R RR+KI+++++ LQ+LVP +K D ASMLDE I Y+K L+ Q++++
Sbjct: 280 RKRRDKINQRMKTLQKLVPNSSKSDKASMLDEVIEYLKQLQAQLQMI 326
>gi|30685840|ref|NP_173276.2| transcription factor BEE 1 [Arabidopsis thaliana]
gi|75299631|sp|Q8GZ13.1|BEE1_ARATH RecName: Full=Transcription factor BEE 1; AltName: Full=Basic
helix-loop-helix protein 44; Short=AtbHLH44; Short=bHLH
44; AltName: Full=Protein Brassinosteroid enhanced
expression 1; AltName: Full=Transcription factor EN 77;
AltName: Full=bHLH transcription factor bHLH044
gi|26449635|dbj|BAC41942.1| putative bHLH transcription factor bHLH044 [Arabidopsis thaliana]
gi|28950817|gb|AAO63332.1| At1g18400 [Arabidopsis thaliana]
gi|34391437|gb|AAN18283.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332191590|gb|AEE29711.1| transcription factor BEE 1 [Arabidopsis thaliana]
Length = 260
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RR KI+E++R LQ +VPG K M A+MLDE I YV+ L+ Q+ L
Sbjct: 154 DSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQVEFL 208
>gi|357148526|ref|XP_003574799.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 401
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RRE+IS++++ LQ LVPG K + A MLDE I YV+ L+RQ+ L
Sbjct: 199 DSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFL 253
>gi|224136304|ref|XP_002322296.1| predicted protein [Populus trichocarpa]
gi|222869292|gb|EEF06423.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RRE+ISE+++ILQ LVPG K+ A MLDE I YV+ L+ Q+ L
Sbjct: 183 DSHSLAERVRRERISERMKILQLLVPGCDKITGKALMLDEIINYVQSLQNQVEFL 237
>gi|356498448|ref|XP_003518064.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 354
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 5/108 (4%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMD-TASMLDEAIRYVKFLKRQIRLLQSNQC 176
D S+A R RREKI+ ++++LQ LVPG K+ TA +LD+ I +V+ L+ ++ +L
Sbjct: 197 DSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQNEVEILSMKLA 256
Query: 177 NIVGDDHYNKLSLGATTNTTIATTTASASAAGALDPILGHSLPFHGNR 224
+ +N SL AT T + A P++ +P +GNR
Sbjct: 257 AVNPVIDFNLDSLLATEGVTPMDCNFPPTVA----PVMWPEIPQNGNR 300
>gi|297739719|emb|CBI29901.3| unnamed protein product [Vitis vinifera]
Length = 280
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 13/103 (12%)
Query: 81 ELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQR 140
E+ AM++ + Q D P IR + + P+S+A R RR +ISE++R LQ
Sbjct: 178 EMAAMEKFL------QFQDSVPCKIRAKRG----CATHPRSIAERVRRTRISERMRKLQE 227
Query: 141 LVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSNQ--CNIVG 180
LVP K +TA MLD A+ Y+K L++Q L N+ C +G
Sbjct: 228 LVPNMDKQTNTADMLDLAVEYIKDLQKQYNTLTDNRAHCKCLG 270
>gi|163311848|gb|ABY26937.1| putative anthocyanin transcriptional regulator [Ipomoea
hochstetteri]
Length = 683
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 41/56 (73%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
+A R RREK++E+ IL+ LVP TKMD AS+L + I YVK L+R+I+ L++ + N
Sbjct: 488 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEAARGN 543
>gi|116785394|gb|ABK23705.1| unknown [Picea sitchensis]
Length = 333
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 37/50 (74%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ + RR +I+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q+++L
Sbjct: 163 LSEKRRRNRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKKLQLQVQML 212
>gi|168048993|ref|XP_001776949.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671650|gb|EDQ58198.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 517
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
P+S+A R RR KISE+++ LQ LVP K +T+ MLDE + YVK L+RQ++ L
Sbjct: 393 PRSIAERVRRTKISERMKKLQDLVPSMDKQTNTSDMLDETVEYVKSLQRQVQEL 446
>gi|357454359|ref|XP_003597460.1| Transcription factor bHLH122 [Medicago truncatula]
gi|355486508|gb|AES67711.1| Transcription factor bHLH122 [Medicago truncatula]
Length = 412
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSNQC 176
P+S+A R RR KISE++R LQ LVP K +TA MLD A+ Y+K L++Q + LQ Q
Sbjct: 342 PRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQAQKLQDCQA 400
>gi|242074344|ref|XP_002447108.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
gi|241938291|gb|EES11436.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
Length = 188
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 37/49 (75%)
Query: 123 AARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
+ R RR++I+EK++ LQ L+P TK D SMLDEAI Y+K L+ Q+++L
Sbjct: 27 SERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQML 75
>gi|108707005|gb|ABF94800.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 809
Score = 55.8 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/97 (39%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 79 EEELGAM--KEMMYRIAAMQPVDIDPTTIRKPKRRNIR-ISDDPQSVAARHRREKISEKI 135
+EE G M +E+ A + D D + R R + + S+A R RREKI+E++
Sbjct: 595 QEETGEMPQRELSMEHAGEKAGDADASREEYVHVRAKRGQATNSHSLAERFRREKINERM 654
Query: 136 RILQRLVPGGTKMD-TASMLDEAIRYVKFLKRQIRLL 171
++LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 655 KLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFL 691
>gi|58743491|gb|AAW81732.1| putative bZIPtranscription factor protein [Brassica oleracea]
Length = 263
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RR KI+E++R LQ +VPG K M A+MLDE I YV+ L+ Q+ LL
Sbjct: 157 DSHSLAERVRRGKINERLRCLQDIVPGCYKSMGMATMLDEIINYVQSLQNQVELL 211
>gi|390979908|gb|AFM30926.1| basic helix-loop-helix, partial [Vitis vinifera]
Length = 270
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASM-LDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE++++LQ LVPG K+ ++ LDE I YVK L+ Q+ L
Sbjct: 117 DSHSLAERARREKISERMKLLQSLVPGCDKLIGKTLVLDEIINYVKSLQNQVEFL 171
>gi|357520555|ref|XP_003630566.1| BHLH transcription factor [Medicago truncatula]
gi|355524588|gb|AET05042.1| BHLH transcription factor [Medicago truncatula]
Length = 327
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ILQ+LVPG ++ A +LDE I YV+ L+ Q+ L
Sbjct: 154 DSHSLAERVRREKISERMKILQQLVPGCDRVTGKALVLDEIINYVQSLQNQVEFL 208
>gi|302807648|ref|XP_002985518.1| hypothetical protein SELMODRAFT_451590 [Selaginella moellendorffii]
gi|300146724|gb|EFJ13392.1| hypothetical protein SELMODRAFT_451590 [Selaginella moellendorffii]
Length = 551
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 39/51 (76%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
VA R RR+K++E++ L+ LVP TKMD AS+L +AI YVK L++Q++ LQ
Sbjct: 338 VAERKRRKKLNERLYSLRALVPKITKMDRASILGDAIEYVKELQQQVKELQ 388
>gi|414869406|tpg|DAA47963.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 277
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSNQ-- 175
P+S+A R RR KISE+IR LQ LVP K +T+ MLD A+ Y+K L++Q++ L ++
Sbjct: 204 PRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQVKALNESRAS 263
Query: 176 CNIVGDDHYNKLS 188
C H + S
Sbjct: 264 CTCPASKHQQRFS 276
>gi|302790872|ref|XP_002977203.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
gi|300155179|gb|EFJ21812.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
Length = 158
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 116 SDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
+ D S+A R RREKISE+++ LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 65 ATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 121
>gi|125554209|gb|EAY99814.1| hypothetical protein OsI_21804 [Oryza sativa Indica Group]
Length = 315
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ + RR KI+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q+++L
Sbjct: 110 LSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 159
>gi|108707003|gb|ABF94798.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 810
Score = 55.8 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/97 (39%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 79 EEELGAM--KEMMYRIAAMQPVDIDPTTIRKPKRRNIR-ISDDPQSVAARHRREKISEKI 135
+EE G M +E+ A + D D + R R + + S+A R RREKI+E++
Sbjct: 595 QEETGEMPQRELSMEHAGEKAGDADASREEYVHVRAKRGQATNSHSLAERFRREKINERM 654
Query: 136 RILQRLVPGGTKMD-TASMLDEAIRYVKFLKRQIRLL 171
++LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 655 KLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFL 691
>gi|30680903|ref|NP_849996.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|119935961|gb|ABM06045.1| At2g20180 [Arabidopsis thaliana]
gi|330251884|gb|AEC06978.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 407
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 38/50 (76%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR++I+E+++ LQ L+P K D ASMLDEAI Y+K L+ QI+++
Sbjct: 220 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMM 269
>gi|18402256|ref|NP_566639.1| transcription factor bHLH113 [Arabidopsis thaliana]
gi|75311549|sp|Q9LT67.1|BH113_ARATH RecName: Full=Transcription factor bHLH113; AltName: Full=Basic
helix-loop-helix protein 113; Short=AtbHLH113;
Short=bHLH 113; AltName: Full=Transcription factor EN
61; AltName: Full=bHLH transcription factor bHLH113
gi|11994473|dbj|BAB02475.1| unnamed protein product [Arabidopsis thaliana]
gi|332642727|gb|AEE76248.1| transcription factor bHLH113 [Arabidopsis thaliana]
Length = 270
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%)
Query: 106 RKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
RKP ++ R + A+ R+E++ E+I LQ+LV K D AS+L EA+ Y+KFL+
Sbjct: 135 RKPGKKGKRNQEKSSVGIAKVRKERLGERIAALQQLVSPYGKTDAASVLHEAMGYIKFLQ 194
Query: 166 RQIRLLQS 173
QI++L S
Sbjct: 195 DQIQVLCS 202
>gi|357118625|ref|XP_003561052.1| PREDICTED: uncharacterized protein LOC100821164 [Brachypodium
distachyon]
Length = 331
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 37/50 (74%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ + RR +I+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q+++L
Sbjct: 113 LSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 162
>gi|55296133|dbj|BAD67851.1| basic helix-loop-helix protein SPATULA-like [Oryza sativa Japonica
Group]
gi|125596157|gb|EAZ35937.1| hypothetical protein OsJ_20240 [Oryza sativa Japonica Group]
Length = 315
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ + RR KI+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q+++L
Sbjct: 110 LSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 159
>gi|356548947|ref|XP_003542860.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 438
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 10/90 (11%)
Query: 84 AMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVP 143
A E +Y+I P I + KR + P+S+A R RR +IS +I+ LQ L P
Sbjct: 344 ATMEKLYQIQGSVPCKI------RAKRG---FATHPRSIAERERRTRISARIKKLQDLFP 394
Query: 144 GGTKM-DTASMLDEAIRYVKFLKRQIRLLQ 172
K TA MLD A+ Y+K L++Q+++L+
Sbjct: 395 KSDKQTSTADMLDLAVEYIKDLQKQVKILR 424
>gi|357516845|ref|XP_003628711.1| BHLH transcription factor [Medicago truncatula]
gi|355522733|gb|AET03187.1| BHLH transcription factor [Medicago truncatula]
Length = 467
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE+++ LQ LVPG K+ A MLDE I YV+ L++Q+ L
Sbjct: 317 SLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQQQVEFL 368
>gi|302820581|ref|XP_002991957.1| hypothetical protein SELMODRAFT_430203 [Selaginella moellendorffii]
gi|300140199|gb|EFJ06925.1| hypothetical protein SELMODRAFT_430203 [Selaginella moellendorffii]
Length = 551
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 39/51 (76%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
VA R RR+K++E++ L+ LVP TKMD AS+L +AI YVK L++Q++ LQ
Sbjct: 338 VAERKRRKKLNERLYSLRALVPKITKMDRASILGDAIEYVKELQQQVKELQ 388
>gi|225456461|ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vitis vinifera]
gi|297734492|emb|CBI15739.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE++++LQ LVPG K+ A MLDE I YV+ L+ Q+ L
Sbjct: 180 DSHSLAERVRREKISERMKLLQALVPGCDKVTGKALMLDEIINYVQSLQNQVEFL 234
>gi|110737548|dbj|BAF00716.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 407
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 38/50 (76%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR++I+E+++ LQ L+P K D ASMLDEAI Y+K L+ QI+++
Sbjct: 220 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMM 269
>gi|115460586|ref|NP_001053893.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|38344324|emb|CAE02150.2| OSJNBa0058K23.6 [Oryza sativa Japonica Group]
gi|113565464|dbj|BAF15807.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|218195592|gb|EEC78019.1| hypothetical protein OsI_17435 [Oryza sativa Indica Group]
gi|222629570|gb|EEE61702.1| hypothetical protein OsJ_16185 [Oryza sativa Japonica Group]
Length = 181
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 37/49 (75%)
Query: 123 AARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
+ R RR++I+EK++ LQ L+P TK D SMLDEAI Y+K L+ Q+++L
Sbjct: 21 SERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQML 69
>gi|297606720|ref|NP_001058876.2| Os07g0143200 [Oryza sativa Japonica Group]
gi|255677508|dbj|BAF20790.2| Os07g0143200 [Oryza sativa Japonica Group]
Length = 447
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR++I+EK+R LQ LVP K D AS+LDEAI Y+K L+ Q++++
Sbjct: 236 LSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQIM 285
>gi|90399331|emb|CAJ86131.1| H0313F03.15 [Oryza sativa Indica Group]
Length = 307
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
V+ + RR++I+EK++ LQ L+P TK D SMLDEAI Y+K L+ Q+++L
Sbjct: 146 VSRKRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQML 195
>gi|297843798|ref|XP_002889780.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335622|gb|EFH66039.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 140
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE++R+LQ LVPG K+ A MLDE I Y++ L++Q+ L
Sbjct: 60 SLAERVRREKISERMRLLQELVPGCNKITGKAFMLDEIINYIQSLQQQVEFL 111
>gi|326497797|dbj|BAK05983.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 386
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 37/50 (74%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ + RR +I+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q+++L
Sbjct: 169 LSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 218
>gi|4006880|emb|CAB16798.1| putative protein [Arabidopsis thaliana]
gi|7270642|emb|CAB80359.1| putative protein [Arabidopsis thaliana]
Length = 415
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 8/106 (7%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL-QSNQCNIVG 180
++ + RR +I+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q+++L N N+
Sbjct: 204 LSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRNGINL-- 261
Query: 181 DDHYNKLSLGATTNTTIATTTASASAAGALDPILGHSLPFHGNRNS 226
+ L L TT + + A DP+L H+ F N+
Sbjct: 262 ----HPLCLPGTTLHPLQLSQIRPPEATN-DPLLNHTNQFASTSNA 302
>gi|297844782|ref|XP_002890272.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
gi|297336114|gb|EFH66531.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
Length = 1143
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RR KI+E++R LQ +VPG K M A+MLDE I YV+ L+ Q+ L
Sbjct: 1037 DSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQVEFL 1091
>gi|168039065|ref|XP_001772019.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676620|gb|EDQ63100.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 147
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 63 DSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVESL 117
>gi|293332473|ref|NP_001169219.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|223975629|gb|ACN32002.1| unknown [Zea mays]
gi|414589883|tpg|DAA40454.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 13/101 (12%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLLQ---- 172
D S+A R RREKIS++++ LQ LVPG K + A MLDE I YV+ L++Q+ L
Sbjct: 165 DSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLA 224
Query: 173 --------SNQCNIVGDDHYNKLSLGATTNTTIATTTASAS 205
SN ++ D Y + G + ++ +A A+
Sbjct: 225 TVNPELDFSNLSTLLHKDMYQQPCGGPSASSVFPLESAGAA 265
>gi|326487850|dbj|BAJ89764.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508951|dbj|BAJ86868.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 396
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
R RR++I+EK+R LQ L+P K D AS+LDEAI Y+K L+ Q++++
Sbjct: 216 RRRRDRINEKMRSLQELIPHCNKADKASILDEAIEYLKSLQMQVQVM 262
>gi|297832118|ref|XP_002883941.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
gi|297329781|gb|EFH60200.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
Length = 486
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 38/50 (76%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR++I+E+++ LQ L+P K D ASMLDEAI Y+K L+ QI+++
Sbjct: 300 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQVM 349
>gi|357119457|ref|XP_003561456.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 334
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 98 VDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEA 157
VD T+ R +R R ++ + + R RR++I+EK++ LQ LVP K D AS+LDEA
Sbjct: 127 VDETRTSRRPAGKRRARAAE-VHNQSERRRRDRINEKMKALQELVPHCNKSDKASILDEA 185
Query: 158 IRYVKFLKRQIRLL 171
I Y+K L+ Q++++
Sbjct: 186 IEYLKSLQLQVQIM 199
>gi|356557515|ref|XP_003547061.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 411
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 5/78 (6%)
Query: 95 MQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASM 153
+Q D P IR + + P+S+A R RR KISE++R LQ LVP K +TA M
Sbjct: 323 LQFSDSVPCKIRAKRG----CATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADM 378
Query: 154 LDEAIRYVKFLKRQIRLL 171
LD A+ Y+K L++Q++ L
Sbjct: 379 LDLAVDYIKDLQKQVQTL 396
>gi|302810858|ref|XP_002987119.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
gi|300145016|gb|EFJ11695.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
Length = 85
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQI 168
P+S+A R RR +ISE++R LQ LVP K +T+ MLDEA+ Y+KFL++Q+
Sbjct: 35 PRSIAERVRRTRISERMRRLQELVPNMDKQTNTSDMLDEAVEYMKFLQKQV 85
>gi|414591363|tpg|DAA41934.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 448
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE++++LQ LVPG +K+ A MLDE I YV+ L+ Q+ L
Sbjct: 287 DSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQVEFL 341
>gi|19401700|gb|AAL87667.1| transcription factor RAU1 [Oryza sativa]
Length = 150
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Query: 95 MQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASM 153
+Q D P IR + + P+S+A R RR +ISE+IR LQ LVP K +TA M
Sbjct: 59 LQFQDAVPCKIRAKRG----CATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADM 114
Query: 154 LDEAIRYVKFLKRQIRLLQSNQCNIVGDDHYNKLS 188
LD A+ Y+K L++Q++ L ++ N + + S
Sbjct: 115 LDLAVDYIKDLQKQVKGLNDSRANCTCSAKHQQYS 149
>gi|47232560|dbj|BAD18983.1| bHLH transcription activator Ivory seed [Ipomoea tricolor]
gi|47232562|dbj|BAD18984.1| bHLH transcription activator Ivory seed [Ipomoea tricolor]
Length = 670
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 41/56 (73%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
+A R RREK++E+ IL+ LVP TKMD AS+L + I YVK L+R+++ L++ + N
Sbjct: 475 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRVQELEAARGN 530
>gi|414589882|tpg|DAA40453.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 329
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 13/101 (12%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLLQ---- 172
D S+A R RREKIS++++ LQ LVPG K + A MLDE I YV+ L++Q+ L
Sbjct: 165 DSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLA 224
Query: 173 --------SNQCNIVGDDHYNKLSLGATTNTTIATTTASAS 205
SN ++ D Y + G + ++ +A A+
Sbjct: 225 TVNPELDFSNLSTLLHKDMYQQPCGGPSASSVFPLESAGAA 265
>gi|223702440|gb|ACN21651.1| putative basic helix-loop-helix protein BHLH15 [Lotus japonicus]
Length = 274
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%)
Query: 106 RKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
+KP + + + + A+ R+EK+ E+I LQ+LV K DTAS+L EA Y+KFL+
Sbjct: 145 QKPPYKKTKAENPTSTGHAKKRKEKLGERIAALQQLVSPFGKTDTASVLHEATGYIKFLQ 204
Query: 166 RQIRLLQS 173
Q+++L S
Sbjct: 205 DQVQVLCS 212
>gi|79465433|ref|NP_192426.2| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
gi|332657087|gb|AEE82487.1| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
Length = 238
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 44/69 (63%)
Query: 127 RREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNIVGDDHYNK 186
R+EK+ ++I LQ+LV K DTAS+L+EA+ Y+KFL+ Q+ +L + + N +G +
Sbjct: 115 RKEKLGDRITALQQLVSPFGKTDTASVLNEAVEYIKFLQEQVTVLSNPEQNTIGSVQQQQ 174
Query: 187 LSLGATTNT 195
S + NT
Sbjct: 175 CSNKKSINT 183
>gi|15219606|ref|NP_174776.1| transcription factor bHLH80 [Arabidopsis thaliana]
gi|75308885|sp|Q9C8P8.1|BH080_ARATH RecName: Full=Transcription factor bHLH80; AltName: Full=Basic
helix-loop-helix protein 80; Short=AtbHLH80; Short=bHLH
80; AltName: Full=Transcription factor EN 71; AltName:
Full=bHLH transcription factor bHLH080
gi|12324283|gb|AAG52112.1|AC023064_5 helix-loop-helix protein 1A, putative; 28707-26892 [Arabidopsis
thaliana]
gi|15724178|gb|AAL06481.1|AF411791_1 At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|20127088|gb|AAM10958.1|AF488612_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|20147401|gb|AAM10410.1| At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|332193674|gb|AEE31795.1| transcription factor bHLH80 [Arabidopsis thaliana]
Length = 259
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSNQ 175
P+S+A R RR +IS++IR LQ LVP K +TA ML+EA+ YVK L+ QI+ L Q
Sbjct: 191 PRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQIQELTEQQ 248
>gi|356550347|ref|XP_003543549.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 408
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 5/78 (6%)
Query: 95 MQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASM 153
+Q D P IR + + P+S+A R RR KISE++R LQ LVP K +TA M
Sbjct: 320 LQFSDSVPCKIRAKRG----CATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADM 375
Query: 154 LDEAIRYVKFLKRQIRLL 171
LD A+ Y+K L++Q++ L
Sbjct: 376 LDLAVDYIKDLQKQVQTL 393
>gi|326505558|dbj|BAJ95450.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 387
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
R RR++I+EK+R LQ L+P K D AS+LDEAI Y+K L+ Q++++
Sbjct: 207 RRRRDRINEKMRSLQELIPHCNKADKASILDEAIEYLKSLQMQVQVM 253
>gi|357113061|ref|XP_003558323.1| PREDICTED: transcription factor PIF5-like [Brachypodium distachyon]
Length = 418
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
R RR++I+EK+R LQ L+P K D AS+LDEAI Y+K L+ Q++++
Sbjct: 245 RRRRDRINEKMRSLQELIPHCNKADKASILDEAIEYLKSLQMQLQIM 291
>gi|222636419|gb|EEE66551.1| hypothetical protein OsJ_23063 [Oryza sativa Japonica Group]
Length = 517
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR++I+EK+R LQ LVP K D AS+LDEAI Y+K L+ Q++++
Sbjct: 335 LSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQIM 384
>gi|239051052|ref|NP_001132631.2| uncharacterized protein LOC100194106 [Zea mays]
gi|238908727|gb|ACF81557.2| unknown [Zea mays]
gi|414872549|tpg|DAA51106.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 364
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 39/53 (73%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSN 174
+A R RREK+S++ L ++VPG KMD AS+L +AI+YVK L+ Q++ L+ +
Sbjct: 189 LAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLEDD 241
>gi|297813903|ref|XP_002874835.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297320672|gb|EFH51094.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 300
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%)
Query: 127 RREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNIVGDDHYNK 186
R+EK+ ++I LQ+LV K DTAS+L+EA+ Y+KFL+ Q+ +L + N +G +
Sbjct: 176 RKEKLGDRITALQQLVSPFGKTDTASVLNEAVEYIKFLQEQVTVLSNPDQNTIGSVQQQQ 235
Query: 187 LSLGATTNT 195
S + NT
Sbjct: 236 CSDKKSMNT 244
>gi|147802826|emb|CAN64154.1| hypothetical protein VITISV_000192 [Vitis vinifera]
Length = 270
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASM-LDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE++++LQ LVPG K+ ++ LDE I YVK L+ Q+ L
Sbjct: 117 DSHSLAERARREKISERMKLLQSLVPGCDKIIGKTLVLDEIINYVKSLQNQVEFL 171
>gi|115489518|ref|NP_001067246.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|77556567|gb|ABA99363.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108862946|gb|ABA99364.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649753|dbj|BAF30265.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|125537356|gb|EAY83844.1| hypothetical protein OsI_39060 [Oryza sativa Indica Group]
gi|215694924|dbj|BAG90115.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 445
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
R RR++I+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q++++
Sbjct: 279 RRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMM 325
>gi|356498105|ref|XP_003517894.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 264
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ILQ +VPG K + A +LDE I Y++ L+RQ+ L
Sbjct: 146 DSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 200
>gi|308084333|gb|ADO13282.1| bHLH [Pisum sativum]
Length = 652
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNIVGD 181
+A R RREK++E+ IL+ LVP TKMD AS+L + I Y+K L+R+I+ L++ + +
Sbjct: 471 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYLKQLRRKIQDLETRNRQMESE 530
Query: 182 DHYNKLSLGATTNTTIATTTASASAAGA 209
+ +G T + + + G
Sbjct: 531 KSGVTVLVGPTEKKKVRIVEGNGTGGGV 558
>gi|218195917|gb|EEC78344.1| hypothetical protein OsI_18091 [Oryza sativa Indica Group]
Length = 339
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE++++LQ LVPG K+ A MLDE I YV+ L+ Q+ L
Sbjct: 189 DSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQVEFL 243
>gi|326523695|dbj|BAJ93018.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 417
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKI E++++LQ LVP K+ A MLDE I YV+ L+RQ+ L
Sbjct: 267 DSHSLAERVRREKIGERMKLLQSLVPSCNKITGKALMLDEIINYVQSLQRQVEFL 321
>gi|6714300|gb|AAF25996.1|AC013354_15 F15H18.11 [Arabidopsis thaliana]
Length = 1154
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RR KI+E++R LQ +VPG K M A+MLDE I YV+ L+ Q+ L
Sbjct: 1048 DSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQVEFL 1102
>gi|108862947|gb|ABA99362.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 446
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
R RR++I+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q++++
Sbjct: 279 RRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMM 325
>gi|218199079|gb|EEC81506.1| hypothetical protein OsI_24867 [Oryza sativa Indica Group]
Length = 593
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR++I+EK+R LQ LVP K D AS+LDEAI Y+K L+ Q++++
Sbjct: 411 LSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQIM 460
>gi|168041399|ref|XP_001773179.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675538|gb|EDQ62032.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 550
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 39/51 (76%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
VA R RR+K++E++ L+ LVP TKMD AS+L +AI YVK L++Q++ LQ
Sbjct: 319 VAERKRRKKLNERLYSLRALVPKITKMDRASILGDAIEYVKELQQQVKELQ 369
>gi|343795733|gb|AEM63394.1| delila2 [Antirrhinum majus]
Length = 644
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
++ R RREKI+E+ IL LVP G K+D S+LD I Y++ L+R++ L+SN+
Sbjct: 446 LSERKRREKINERFMILASLVPSGGKVDKVSILDHTIDYLRGLERKVEELESNK 499
>gi|226492880|ref|NP_001152266.1| BHLH transcription factor [Zea mays]
gi|195654447|gb|ACG46691.1| BHLH transcription factor [Zea mays]
Length = 428
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE++++LQ LVPG +K+ A MLDE I YV+ L+ Q+ L
Sbjct: 267 DSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQVEFL 321
>gi|334183900|ref|NP_001185394.1| transcription factor BEE 3 [Arabidopsis thaliana]
gi|332197393|gb|AEE35514.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 260
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RR KI+E+++ LQ +VPG K M A+MLDE I YV+ L+ Q+ L
Sbjct: 156 DSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFL 210
>gi|218187227|gb|EEC69654.1| hypothetical protein OsI_39066 [Oryza sativa Indica Group]
Length = 469
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
R RR++I+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q++++
Sbjct: 288 RRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMM 334
>gi|115461581|ref|NP_001054390.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|57863903|gb|AAW56931.1| unknown protein [Oryza sativa Japonica Group]
gi|57863910|gb|AAS88824.2| unknown protein [Oryza sativa Japonica Group]
gi|113577941|dbj|BAF16304.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|215686863|dbj|BAG89713.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629873|gb|EEE62005.1| hypothetical protein OsJ_16787 [Oryza sativa Japonica Group]
gi|323388921|gb|ADX60265.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 339
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE++++LQ LVPG K+ A MLDE I YV+ L+ Q+ L
Sbjct: 189 DSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQVEFL 243
>gi|356520601|ref|XP_003528950.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 272
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 116 SDDPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
+ D S+A R RR KI+EK+R LQ +VPG K M A MLDE I YV+ L+ Q+ L
Sbjct: 162 ATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFL 218
>gi|20127049|gb|AAM10944.1|AF488587_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 264
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 120 QSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNI 178
QS+AAR RR +I+EK + L +L+PG K +TA M + A +YVKFL+ QI +LQ Q +
Sbjct: 139 QSIAARKRRRRITEKTQELGKLIPGSQKHNTAEMFNAAAKYVKFLQAQIEILQLKQTKM 197
>gi|226529722|ref|NP_001147789.1| symbiotic ammonium transporter [Zea mays]
gi|195613768|gb|ACG28714.1| symbiotic ammonium transporter [Zea mays]
Length = 359
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 39/53 (73%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSN 174
+A R RREK+S++ L ++VPG KMD AS+L +AI+YVK L+ Q++ L+ +
Sbjct: 184 LAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLEDD 236
>gi|356529573|ref|XP_003533364.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 273
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 116 SDDPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
+ D S+A R RR KI+EK+R LQ +VPG K M A MLDE I YV+ L+ Q+ L
Sbjct: 163 ATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFL 219
>gi|297746360|emb|CBI16416.3| unnamed protein product [Vitis vinifera]
Length = 297
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 95 MQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASM 153
+Q D P IR + + P+S+A R RR +ISE++R LQ LVP K +T+ M
Sbjct: 209 LQFQDSVPCKIRAKRG----CATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDM 264
Query: 154 LDEAIRYVKFLKRQIRLLQSNQCNIV 179
LD A+ Y+K L++Q++ L N+
Sbjct: 265 LDLAVDYIKDLQKQVKTLSDNRAKCT 290
>gi|30698967|ref|NP_177524.2| transcription factor BEE 3 [Arabidopsis thaliana]
gi|75299562|sp|Q8GWK7.1|BEE3_ARATH RecName: Full=Transcription factor BEE 3; AltName: Full=Basic
helix-loop-helix protein 50; Short=AtbHLH50; Short=bHLH
50; AltName: Full=Protein Brassinosteroid enhanced
expression 3; AltName: Full=Transcription factor EN 76;
AltName: Full=bHLH transcription factor bHLH050
gi|26452579|dbj|BAC43374.1| putative bHLH transcription factor bHLH050 [Arabidopsis thaliana]
gi|29824159|gb|AAP04040.1| putative helix-loop-helix DNA-binding protein [Arabidopsis
thaliana]
gi|332197392|gb|AEE35513.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 261
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RR KI+E+++ LQ +VPG K M A+MLDE I YV+ L+ Q+ L
Sbjct: 156 DSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFL 210
>gi|356536767|ref|XP_003536906.1| PREDICTED: transcription factor TT8-like [Glycine max]
Length = 654
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 39/52 (75%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
+A R RREK++E+ IL+ LVP TKMD AS+L + I YVK L+R+I+ L++
Sbjct: 466 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRKIQELEA 517
>gi|242082273|ref|XP_002445905.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
gi|241942255|gb|EES15400.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
Length = 399
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 95 MQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASM 153
+Q D P IR + + P+S+A R RR KISE+IR LQ LVP K +T+ M
Sbjct: 307 LQFQDAVPCKIRAKRG----CATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDM 362
Query: 154 LDEAIRYVKFLKRQIRLLQSNQCNIV 179
LD A+ Y+K L++Q++ L ++ +
Sbjct: 363 LDLAVDYIKDLQKQVKALNESRASCT 388
>gi|148909440|gb|ABR17818.1| unknown [Picea sitchensis]
Length = 757
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 40/53 (75%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSN 174
+A R RREK++EK +L+ LVP TKMD AS+L +AI Y+K L+R++ L+++
Sbjct: 530 LAERRRREKLNEKFIVLRSLVPFVTKMDKASILGDAIEYLKQLQRRVEELEAS 582
>gi|163311836|gb|ABY26931.1| putative anthocyanin transcriptional regulator [Ipomoea quamoclit]
Length = 659
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 40/54 (74%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
+A R RREK++E+ IL+ LVP TKMD AS+L + I YVK L+R+I+ L++ +
Sbjct: 464 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEATR 517
>gi|168009958|ref|XP_001757672.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691366|gb|EDQ77729.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 83
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ LQ LVPG +K+ A ML+E I YV+ L+RQI L
Sbjct: 15 DSHSLAERVRREKISERMKFLQDLVPGCSKITGKAVMLEEIINYVQSLQRQIEFL 69
>gi|356502813|ref|XP_003520210.1| PREDICTED: transcription factor TT8-like [Glycine max]
Length = 646
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 39/52 (75%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
+A R RREK++E+ IL+ LVP TKMD AS+L + I YVK L+R+I+ L++
Sbjct: 458 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRKIQELEA 509
>gi|359473541|ref|XP_002268359.2| PREDICTED: transcription factor bHLH111 [Vitis vinifera]
gi|297738310|emb|CBI27511.3| unnamed protein product [Vitis vinifera]
Length = 508
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 45/69 (65%), Gaps = 4/69 (5%)
Query: 103 TTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVK 162
T ++KPK+ + +S SV + + KI ++I LQ++V K DTAS+L EAI Y+K
Sbjct: 381 TVMKKPKQESSAVS----SVKMQAPKVKIGDRITALQQIVSPFGKTDTASVLYEAIGYIK 436
Query: 163 FLKRQIRLL 171
FL+ Q++LL
Sbjct: 437 FLQEQVQLL 445
>gi|15221471|ref|NP_174355.1| transcription factor bHLH52 [Arabidopsis thaliana]
gi|75313131|sp|Q9SA82.1|BH052_ARATH RecName: Full=Transcription factor bHLH52; AltName: Full=Basic
helix-loop-helix protein 52; Short=AtbHLH52; Short=bHLH
52; AltName: Full=Transcription factor EN 124; AltName:
Full=bHLH transcription factor bHLH052
gi|4587523|gb|AAD25754.1|AC007060_12 T5i8.12 [Arabidopsis thaliana]
gi|332193137|gb|AEE31258.1| transcription factor bHLH52 [Arabidopsis thaliana]
Length = 264
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 120 QSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNI 178
QS+AAR RR +I+EK + L +L+PG K +TA M + A +YVKFL+ QI +LQ Q +
Sbjct: 139 QSIAARKRRRRITEKTQELGKLIPGSQKHNTAEMFNAAAKYVKFLQAQIEILQLKQTKM 197
>gi|357130181|ref|XP_003566729.1| PREDICTED: uncharacterized protein LOC100831834 [Brachypodium
distachyon]
Length = 298
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 107 KPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLK 165
+ KR R D S+A R RREKISEK+ +LQ LVPG K+ A MLDE I YV+ L+
Sbjct: 158 RAKRGQAR---DSHSLAERVRREKISEKMLLLQSLVPGCDKVTGKAMMLDEIISYVQSLQ 214
Query: 166 RQIRLL 171
Q+ L
Sbjct: 215 NQVEFL 220
>gi|356534621|ref|XP_003535851.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 357
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 5/108 (4%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMD-TASMLDEAIRYVKFLKRQIRLLQSNQC 176
D S+A R RREKI+ ++++LQ LVPG K+ TA +LD+ I +V+ L+ ++ +L
Sbjct: 201 DSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQNEVEILSMKLA 260
Query: 177 NIVGDDHYNKLSLGATTNTTIATTTASASAAGALDPILGHSLPFHGNR 224
+ +N SL AT T + A P++ +P +GNR
Sbjct: 261 AVNPVIDFNLDSLLATEGVTPMDCNFPPTVA----PVMWPEIPQNGNR 304
>gi|326501104|dbj|BAJ98783.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 384
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RRE+IS++++ LQ LVPG K + A MLDE I YV+ L+RQ+ L
Sbjct: 194 DSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFL 248
>gi|163311838|gb|ABY26932.1| putative anthocyanin transcriptional regulator [Ipomoea coccinea]
Length = 661
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 39/52 (75%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
+A R RREK++E+ IL+ LVP TKMD AS+L + I YVK L+R+I+ L++
Sbjct: 466 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEA 517
>gi|242049812|ref|XP_002462650.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
gi|241926027|gb|EER99171.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
Length = 281
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RRE+ISE++R+LQ LVPG K+ A +LDE I YV+ L+ Q+ L
Sbjct: 118 DSHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFL 172
>gi|359489230|ref|XP_002275629.2| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 465
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 35/45 (77%)
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIR 169
R RR+KI+++++ LQ+LVP +K D ASMLDE I Y+K L+ Q++
Sbjct: 292 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQ 336
>gi|125545578|gb|EAY91717.1| hypothetical protein OsI_13359 [Oryza sativa Indica Group]
Length = 359
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 38/51 (74%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
+A R RREK+S++ L ++VPG KMD AS+L +AI+YVK L+ Q++ L+
Sbjct: 184 LAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLE 234
>gi|413920794|gb|AFW60726.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 328
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 116 SDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRL 170
+ D S+A R RREKI E++++LQ LVPG +K+ A MLDE I YV+ L+RQ+ +
Sbjct: 263 ATDSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEV 318
>gi|21593792|gb|AAM65759.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 52/79 (65%)
Query: 102 PTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYV 161
PT+IR R + DP S+A R RRE+I+E+IR LQ LVP K D A+M+DE + YV
Sbjct: 139 PTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYV 198
Query: 162 KFLKRQIRLLQSNQCNIVG 180
KFL+ Q+++L ++ VG
Sbjct: 199 KFLRLQVKVLSMSRLGGVG 217
>gi|4519199|dbj|BAA75513.1| MYC-RP [Perilla frutescens]
Length = 620
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 37/52 (71%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
++ R RREKISE+ IL LVP G K+D S+LD I Y++ L+R+++ L+S
Sbjct: 425 LSERKRREKISERFSILVSLVPSGGKVDKVSILDHTIEYLRELERKVKDLES 476
>gi|4519201|dbj|BAA75514.1| MYC-GP [Perilla frutescens]
Length = 620
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 37/52 (71%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
++ R RREKISE+ IL LVP G K+D S+LD I Y++ L+R+++ L+S
Sbjct: 425 LSERKRREKISERFSILVSLVPSGGKVDKVSILDHTIEYLRELERKVKDLES 476
>gi|440577342|emb|CCI55348.1| PH01B019A14.17 [Phyllostachys edulis]
Length = 184
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 37/49 (75%)
Query: 123 AARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
+ R RR++I+EK++ LQ L+P TK D SMLDEAI Y+K L+ Q+++L
Sbjct: 25 SERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQIQLQML 73
>gi|226501366|ref|NP_001148121.1| symbiotic ammonium transporter [Zea mays]
gi|195615934|gb|ACG29797.1| symbiotic ammonium transporter [Zea mays]
Length = 340
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 39/53 (73%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSN 174
+A R RREK+S++ L ++VPG KMD AS+L +AI+YVK L+ Q++ L+ +
Sbjct: 163 LAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLEDD 215
>gi|163311834|gb|ABY26930.1| putative anthocyanin transcriptional regulator [Ipomoea alba]
Length = 671
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 39/52 (75%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
+A R RREK++E+ IL+ LVP TKMD AS+L + I YVK L+R+I+ L++
Sbjct: 476 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEA 527
>gi|97974133|dbj|BAE94394.1| bHLH transcriptional factor [Ipomoea nil]
Length = 669
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 39/52 (75%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
+A R RREK++E+ IL+ LVP TKMD AS+L + I YVK L+R+I+ L++
Sbjct: 478 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEA 529
>gi|297846606|ref|XP_002891184.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337026|gb|EFH67443.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 256
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSNQ 175
P+S+A R RR +IS++IR LQ LVP K +TA ML+EA+ YVK L+ QI+ L Q
Sbjct: 188 PRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQGQIQELTEQQ 245
>gi|307135852|gb|ADN33721.1| serine/threonine-protein kinase [Cucumis melo subsp. melo]
Length = 842
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 37/50 (74%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ + RR +I+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q+++L
Sbjct: 203 MSEKRRRRRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 252
>gi|47232558|dbj|BAD18982.1| bHLH transcription activator Ivory seed [Ipomoea purpurea]
gi|125659425|dbj|BAF46858.1| bHLH transcription activator Ivory seed [Ipomoea purpurea]
Length = 665
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 39/52 (75%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
+A R RREK++E+ IL+ LVP TKMD AS+L + I YVK L+R+I+ L++
Sbjct: 473 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEA 524
>gi|15222679|ref|NP_173950.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|42571645|ref|NP_973913.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|75308803|sp|Q9C670.1|BH076_ARATH RecName: Full=Transcription factor bHLH76; AltName: Full=Basic
helix-loop-helix protein 76; Short=AtbHLH76; Short=bHLH
76; AltName: Full=Transcription factor EN 83; AltName:
Full=bHLH transcription factor bHLH076
gi|12321176|gb|AAG50678.1|AC079829_11 bHLH transcription factor GBOF-1, putative [Arabidopsis thaliana]
gi|26449804|dbj|BAC42025.1| putative transcription factor bHLH076 [Arabidopsis thaliana]
gi|28950949|gb|AAO63398.1| At1g26260 [Arabidopsis thaliana]
gi|332192546|gb|AEE30667.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|332192547|gb|AEE30668.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 390
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE+++ LQ LVPG K+ A MLDE I YV+ L+ QI L
Sbjct: 235 SLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFL 286
>gi|226499484|ref|NP_001146943.1| protein SPATULA [Zea mays]
gi|195605542|gb|ACG24601.1| protein SPATULA [Zea mays]
gi|414585417|tpg|DAA35988.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414585418|tpg|DAA35989.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
gi|414585419|tpg|DAA35990.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 3
[Zea mays]
Length = 185
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 123 AARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
+ R RR+KI+EK++ LQ L+P K D SMLDEAI Y+K L+ Q+++L
Sbjct: 26 SERRRRDKINEKLKALQELLPNCNKTDKVSMLDEAIDYLKSLQLQLQML 74
>gi|158515837|gb|ABW69686.1| anthocyanin synthesis regulatory protein [Ipomoea purpurea]
Length = 662
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 39/52 (75%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
+A R RREK++E+ IL+ LVP TKMD AS+L + I YVK L+R+I+ L++
Sbjct: 470 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEA 521
>gi|449450231|ref|XP_004142867.1| PREDICTED: uncharacterized protein LOC101203008 [Cucumis sativus]
Length = 842
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 37/50 (74%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ + RR +I+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q+++L
Sbjct: 203 MSEKRRRRRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 252
>gi|12324208|gb|AAG52074.1|AC012679_12 putative helix-loop-helix DNA-binding protein; 87971-89290
[Arabidopsis thaliana]
Length = 250
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RR KI+E+++ LQ +VPG K M A+MLDE I YV+ L+ Q+ L
Sbjct: 145 DSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFL 199
>gi|158515839|gb|ABW69687.1| anthocyanin synthesis regulatory protein [Ipomoea purpurea]
Length = 664
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 39/52 (75%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
+A R RREK++E+ IL+ LVP TKMD AS+L + I YVK L+R+I+ L++
Sbjct: 472 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEA 523
>gi|413933203|gb|AFW67754.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 341
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 39/53 (73%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSN 174
+A R RREK+S++ L ++VPG KMD AS+L +AI+YVK L+ Q++ L+ +
Sbjct: 165 LAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLEDD 217
>gi|158515841|gb|ABW69688.1| anthocyanin synthesis regulatory protein [Ipomoea purpurea]
Length = 664
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 39/52 (75%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
+A R RREK++E+ IL+ LVP TKMD AS+L + I YVK L+R+I+ L++
Sbjct: 473 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEA 524
>gi|125659430|dbj|BAF46859.1| bHLH transcription activator Ivory seed [Ipomoea purpurea]
Length = 664
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 39/52 (75%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
+A R RREK++E+ IL+ LVP TKMD AS+L + I YVK L+R+I+ L++
Sbjct: 472 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEA 523
>gi|115455061|ref|NP_001051131.1| Os03g0725800 [Oryza sativa Japonica Group]
gi|41469283|gb|AAS07165.1| putative symbiotic ammonium transport protein [Oryza sativa
Japonica Group]
gi|50428739|gb|AAT77090.1| putative transcription factor [Oryza sativa Japonica Group]
gi|108710844|gb|ABF98639.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549602|dbj|BAF13045.1| Os03g0725800 [Oryza sativa Japonica Group]
gi|215767830|dbj|BAH00059.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 359
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 38/51 (74%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
+A R RREK+S++ L ++VPG KMD AS+L +AI+YVK L+ Q++ L+
Sbjct: 184 LAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLE 234
>gi|326495514|dbj|BAJ85853.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 391
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 95 MQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASM 153
+Q D P IR + + P+S+A R RR +ISE+IR LQ LVP K +TA M
Sbjct: 297 LQFQDAVPCKIRAKRG----CATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADM 352
Query: 154 LDEAIRYVKFLKRQIRLLQSNQCNIV 179
LD A+ Y+K L+ Q++++ ++ +
Sbjct: 353 LDLAVDYIKELQEQVKVINESRASCT 378
>gi|226491584|ref|NP_001147257.1| protein SPATULA [Zea mays]
gi|195609152|gb|ACG26406.1| protein SPATULA [Zea mays]
Length = 185
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 123 AARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
+ R RR+KI+EK++ LQ L+P K D SMLDEAI Y+K L+ Q+++L
Sbjct: 26 SERRRRDKINEKLKALQELLPNCNKTDKVSMLDEAIDYLKSLQLQLQML 74
>gi|308080104|ref|NP_001183737.1| uncharacterized protein LOC100502330 [Zea mays]
gi|238014262|gb|ACR38166.1| unknown [Zea mays]
gi|413921691|gb|AFW61623.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413921692|gb|AFW61624.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 319
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASM-LDEAIRYVKFLKRQIRLL 171
D S+A R RRE+ISE++R+LQ LVPG K+ +M LDE I YV+ L+ Q+ L
Sbjct: 140 DSHSLAERVRRERISERMRMLQALVPGCDKVTGKAMVLDEIINYVQSLQNQVEFL 194
>gi|312281897|dbj|BAJ33814.1| unnamed protein product [Thellungiella halophila]
Length = 375
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMD-TASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKI+ ++++LQ LVPG K+ TA +LDE I +V+ L+RQ+ +L
Sbjct: 209 DSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQRQVEML 263
>gi|357517063|ref|XP_003628820.1| Transcription factor MYC2 [Medicago truncatula]
gi|355522842|gb|AET03296.1| Transcription factor MYC2 [Medicago truncatula]
Length = 648
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 50/78 (64%), Gaps = 5/78 (6%)
Query: 106 RKPKRRNIRISDDPQS-----VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRY 160
++PK+R + ++ + A R RREK+++K L+ +VP G+KMD AS+L +AI Y
Sbjct: 444 KRPKKRGRKPANGREEPLNHVEAERQRREKLNQKFYALRAVVPNGSKMDKASLLGDAISY 503
Query: 161 VKFLKRQIRLLQSNQCNI 178
+ LK +++ L+S++ +
Sbjct: 504 INELKSKLQGLESSKGEL 521
>gi|255544792|ref|XP_002513457.1| DNA binding protein, putative [Ricinus communis]
gi|223547365|gb|EEF48860.1| DNA binding protein, putative [Ricinus communis]
Length = 418
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 95 MQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASM 153
+Q D P IR + + P+S+A R RR +ISE++R LQ LVP K +T+ M
Sbjct: 329 LQLQDSVPCKIRAKRG----CATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDM 384
Query: 154 LDEAIRYVKFLKRQIRLLQSNQ 175
LD A+ Y+K L+RQ+ L N+
Sbjct: 385 LDLAVDYIKDLQRQVETLSENR 406
>gi|166428|gb|AAA32663.1| DEL [Antirrhinum majus]
Length = 644
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
++ R RREKI+E+ IL LVP G K+D S+LD I Y++ L+R++ L+SN+
Sbjct: 446 LSERKRREKINERFMILASLVPSGGKVDKVSILDHTIDYLRGLERKVDELESNK 499
>gi|297851058|ref|XP_002893410.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297339252|gb|EFH69669.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 347
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE+++ LQ LVPG K+ A MLDE I YV+ L+ QI L
Sbjct: 180 SLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFL 231
>gi|388498252|gb|AFK37192.1| unknown [Lotus japonicus]
Length = 220
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ILQ LVPG K + A +LDE I Y++ L+ Q+ L
Sbjct: 100 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQVEFL 154
>gi|327194899|gb|AEA34965.1| putative transcription factor BHLH2 [Ipomoea batatas]
Length = 667
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 39/52 (75%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
+A R RREK++E+ IL+ LVP TKMD AS+L + I YVK L+R+I+ L++
Sbjct: 475 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEA 526
>gi|163311840|gb|ABY26933.1| putative anthocyanin transcriptional regulator [Ipomoea trifida]
Length = 676
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 39/52 (75%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
+A R RREK++E+ IL+ LVP TKMD AS+L + I YVK L+R+I+ L++
Sbjct: 484 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEA 535
>gi|163311842|gb|ABY26934.1| putative anthocyanin transcriptional regulator [Ipomoea lacunosa]
Length = 669
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 39/52 (75%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
+A R RREK++E+ IL+ LVP TKMD AS+L + I YVK L+R+I+ L++
Sbjct: 477 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEA 528
>gi|356542383|ref|XP_003539646.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 434
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Query: 84 AMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVP 143
A E Y+I P I + KR + P+S+A R RR +IS +I+ LQ L P
Sbjct: 340 ATMEKFYQIQGSVPCKI------RAKRG---FATHPRSIAERERRTRISARIKKLQDLFP 390
Query: 144 GGTKM-DTASMLDEAIRYVKFLKRQIRLLQ 172
K TA MLD A+ Y+K L++Q+++L+
Sbjct: 391 KTDKQTSTADMLDLAVEYIKDLQKQVKMLR 420
>gi|324022722|gb|ADY15317.1| transparent testa 8 [Prunus avium]
Length = 565
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 41/60 (68%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNIVGD 181
+A R RREK++E+ IL+ LVP TKMD AS+L + I YVK L+++I+ L++ + D
Sbjct: 423 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLEARNVQMEDD 482
>gi|332801235|gb|AEE99259.1| anthocyanin 1-like protein [Nicotiana sylvestris]
Length = 671
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 98 VDIDPTTIRKPKRRNIRISDDPQS---VAARHRREKISEKIRILQRLVPGGTKMDTASML 154
VD T R K +I ++P +A R RREK++E+ IL+ LVP TKMD AS+L
Sbjct: 451 VDSSSTASRFRKGCSITSQEEPSGNHVLAERRRREKLNERFIILRSLVPFVTKMDKASIL 510
Query: 155 DEAIRYVKFLKRQIRLLQS 173
+ I YVK L+++++ L++
Sbjct: 511 GDTIEYVKQLRKKVQDLEA 529
>gi|332801231|gb|AEE99257.1| anthocyanin 1a [Nicotiana tabacum]
Length = 671
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 98 VDIDPTTIRKPKRRNIRISDDPQS---VAARHRREKISEKIRILQRLVPGGTKMDTASML 154
VD T R K +I ++P +A R RREK++E+ IL+ LVP TKMD AS+L
Sbjct: 451 VDSSSTASRFRKGCSITSQEEPSGNHVLAERRRREKLNERFIILRSLVPFVTKMDKASIL 510
Query: 155 DEAIRYVKFLKRQIRLLQS 173
+ I YVK L+++++ L++
Sbjct: 511 GDTIEYVKQLRKKVQDLEA 529
>gi|225425220|ref|XP_002267465.1| PREDICTED: transcription factor bHLH76-like [Vitis vinifera]
Length = 270
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASM-LDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ LQ LVPG K+ ++ LDE I YVK L+ Q+ L
Sbjct: 117 DSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYVKSLQNQVEFL 171
>gi|168024189|ref|XP_001764619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684197|gb|EDQ70601.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 351
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 116 SDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
+ D S+A R RREKIS +++ LQ LVPG +++ A ML+E I YVK L+RQI L
Sbjct: 157 ATDGHSLAERARREKISNRMKFLQALVPGCSEVTGKAVMLEEIINYVKSLQRQIEFL 213
>gi|357148647|ref|XP_003574844.1| PREDICTED: transcription factor bHLH137-like [Brachypodium
distachyon]
Length = 294
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RRE+ISE++R+LQ LVPG K+ A +LDE I YV+ L+ Q+ L
Sbjct: 134 DSHSLAERVRRERISERMRLLQTLVPGCDKVTGKALILDEIINYVQSLQNQVEFL 188
>gi|225441702|ref|XP_002282897.1| PREDICTED: transcription factor bHLH60 [Vitis vinifera]
gi|297739713|emb|CBI29895.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMD-TASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKI+ ++++LQ LVPG K+ TA +LDE I +V+ L+RQ+ L
Sbjct: 206 DSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIISHVQSLQRQVEFL 260
>gi|449438279|ref|XP_004136916.1| PREDICTED: transcription factor bHLH25-like [Cucumis sativus]
gi|449511253|ref|XP_004163905.1| PREDICTED: transcription factor bHLH25-like [Cucumis sativus]
Length = 340
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 45/66 (68%), Gaps = 7/66 (10%)
Query: 111 RNIRISDDPQS----VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKR 166
RN RI PQ+ +A R RREK+S++ L +VPG KMD AS+L +AI+Y+K L+
Sbjct: 162 RNSRI---PQAQDHILAERRRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQE 218
Query: 167 QIRLLQ 172
++++L+
Sbjct: 219 KVKILE 224
>gi|79318615|ref|NP_001031093.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|45935021|gb|AAS79545.1| putative transcription factor [Arabidopsis thaliana]
gi|46367460|emb|CAG25856.1| hypothetical protein [Arabidopsis thaliana]
gi|332192548|gb|AEE30669.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 339
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE+++ LQ LVPG K+ A MLDE I YV+ L+ QI L
Sbjct: 184 SLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFL 235
>gi|45735905|dbj|BAD12937.1| bHLH transcription factor (bHLH123)-like protein [Oryza sativa
Japonica Group]
Length = 418
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 37/55 (67%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
P S+AA+ R+EK+ +++ LQ+LV K DTAS+L E I Y+KFL Q+ L +
Sbjct: 294 PASLAAKVRKEKLGDRVTALQQLVSPFGKTDTASVLHETIEYIKFLHDQVGALSA 348
>gi|357113290|ref|XP_003558437.1| PREDICTED: transcription factor bHLH74-like [Brachypodium
distachyon]
Length = 296
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKI+E+++ LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 130 SLAERFRREKINERMKHLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFL 181
>gi|238009798|gb|ACR35934.1| unknown [Zea mays]
Length = 287
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RRE+ISE++R+LQ LVPG K+ A +LDE I YV+ L+ Q+ L
Sbjct: 120 DNHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFL 174
>gi|226500746|ref|NP_001149110.1| LOC100282732 [Zea mays]
gi|195624818|gb|ACG34239.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 287
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RRE+ISE++R+LQ LVPG K+ A +LDE I YV+ L+ Q+ L
Sbjct: 120 DNHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFL 174
>gi|297839255|ref|XP_002887509.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
gi|297333350|gb|EFH63768.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RR KI+E+++ LQ +VPG K M A+MLDE I YV+ L+ Q+ L
Sbjct: 158 DSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFL 212
>gi|125541527|gb|EAY87922.1| hypothetical protein OsI_09345 [Oryza sativa Indica Group]
Length = 320
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 102 PTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYV 161
PT +P+ + R ++ +++ + RR +I+EK++ LQ L+P +K D ASMLD+AI Y+
Sbjct: 42 PTRPARPRGKRSRAAEV-HNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYL 100
Query: 162 KFLKRQIRLL 171
K L+ Q+++L
Sbjct: 101 KQLQLQVQML 110
>gi|449445700|ref|XP_004140610.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 34/45 (75%)
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIR 169
R RR+KI+++++ LQ+LVP K D ASMLDE I Y+K L+ Q++
Sbjct: 303 RKRRDKINQRMKTLQKLVPNSNKTDKASMLDEVIEYLKQLQAQVQ 347
>gi|125584067|gb|EAZ24998.1| hypothetical protein OsJ_08778 [Oryza sativa Japonica Group]
Length = 320
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 102 PTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYV 161
PT +P+ + R ++ +++ + RR +I+EK++ LQ L+P +K D ASMLD+AI Y+
Sbjct: 42 PTRPARPRGKRSRAAEV-HNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYL 100
Query: 162 KFLKRQIRLL 171
K L+ Q+++L
Sbjct: 101 KQLQLQVQML 110
>gi|449515887|ref|XP_004164979.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 34/45 (75%)
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIR 169
R RR+KI+++++ LQ+LVP K D ASMLDE I Y+K L+ Q++
Sbjct: 303 RKRRDKINQRMKTLQKLVPNSNKTDKASMLDEVIEYLKQLQAQVQ 347
>gi|401782370|dbj|BAM36702.1| bHLH transcriptional factor AN1 homolog [Rosa hybrid cultivar]
Length = 702
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 42/60 (70%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNIVGD 181
+A R RREK++E+ IL+ LVP TKMD AS+L + I YVK L+++I+ L++ ++ D
Sbjct: 480 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLEARNVHLEDD 539
>gi|224075772|ref|XP_002304761.1| predicted protein [Populus trichocarpa]
gi|222842193|gb|EEE79740.1| predicted protein [Populus trichocarpa]
Length = 422
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
P+S+A R RR +ISE++R LQ LVP K +T+ MLD A+ Y+K L+RQ + L N+
Sbjct: 354 PRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQFKALSENRAR 413
Query: 178 IV 179
Sbjct: 414 CT 415
>gi|255586626|ref|XP_002533944.1| DNA binding protein, putative [Ricinus communis]
gi|223526075|gb|EEF28430.1| DNA binding protein, putative [Ricinus communis]
Length = 267
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKI+ K+R LQ LVPG K M A ML+E I YV L+ Q+ L
Sbjct: 158 DSHSIAERVRREKINNKLRCLQDLVPGCHKSMGMAVMLEEIINYVHSLQNQVEFL 212
>gi|20127060|gb|AAM10949.1|AF488593_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 379
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMD-TASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKI+ ++++LQ LVPG K+ TA +LDE I +V+ L+RQ+ +L
Sbjct: 213 DSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQRQVEML 267
>gi|224124904|ref|XP_002319451.1| predicted protein [Populus trichocarpa]
gi|222857827|gb|EEE95374.1| predicted protein [Populus trichocarpa]
Length = 59
Score = 54.7 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 39/51 (76%)
Query: 120 QSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRL 170
+++ R RR++I+EK+R LQ L+P K+D ASMLDEAI Y+K L+ Q+++
Sbjct: 9 HNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQV 59
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.129 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,776,453,819
Number of Sequences: 23463169
Number of extensions: 154831720
Number of successful extensions: 1146161
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2585
Number of HSP's successfully gapped in prelim test: 673
Number of HSP's that attempted gapping in prelim test: 1137573
Number of HSP's gapped (non-prelim): 7795
length of query: 236
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 98
effective length of database: 9,121,278,045
effective search space: 893885248410
effective search space used: 893885248410
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 74 (33.1 bits)