BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047850
(236 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LXD8|HEC3_ARATH Transcription factor HEC3 OS=Arabidopsis thaliana GN=HEC3 PE=1 SV=1
Length = 224
Score = 154 bits (388), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 83/93 (89%), Positives = 90/93 (96%)
Query: 82 LGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRL 141
LGAMKEMMY+IAAMQ VDIDP T++KPKRRN+RISDDPQSVAARHRRE+ISE+IRILQRL
Sbjct: 92 LGAMKEMMYKIAAMQSVDIDPATVKKPKRRNVRISDDPQSVAARHRRERISERIRILQRL 151
Query: 142 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSN 174
VPGGTKMDTASMLDEAIRYVKFLKRQIRLL +N
Sbjct: 152 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLNNN 184
>sp|O81313|IND_ARATH Transcription factor IND OS=Arabidopsis thaliana GN=IND PE=1 SV=3
Length = 198
Score = 153 bits (386), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 71/89 (79%), Positives = 79/89 (88%)
Query: 84 AMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVP 143
AMKEM Y IA MQPVDIDP T+ KP RRN+RISDDPQ+V AR RRE+ISEKIRIL+R+VP
Sbjct: 87 AMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRERISEKIRILKRIVP 146
Query: 144 GGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
GG KMDTASMLDEAIRY KFLKRQ+R+LQ
Sbjct: 147 GGAKMDTASMLDEAIRYTKFLKRQVRILQ 175
>sp|Q8S3D2|BH087_ARATH Transcription factor bHLH87 OS=Arabidopsis thaliana GN=BHLH87 PE=2
SV=1
Length = 373
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 78/97 (80%), Gaps = 1/97 (1%)
Query: 77 EPEEE-LGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKI 135
EP+ E + MKEM+YR AA +PV+ + KPKR+N++IS DPQ+VAAR RRE+ISEKI
Sbjct: 236 EPDAEAIAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKI 295
Query: 136 RILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
R+LQ LVPGGTKMDTASMLDEA Y+KFL+ Q++ L+
Sbjct: 296 RVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKALE 332
>sp|Q9FHA7|HEC1_ARATH Transcription factor HEC1 OS=Arabidopsis thaliana GN=HEC1 PE=1 SV=1
Length = 241
Score = 130 bits (326), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/91 (74%), Positives = 82/91 (90%)
Query: 82 LGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRL 141
+ AM+EM++RIA MQP+ IDP ++ PKRRN+RIS DPQSVAARHRRE+ISE+IRILQRL
Sbjct: 95 MAAMREMIFRIAVMQPIHIDPEAVKPPKRRNVRISKDPQSVAARHRRERISERIRILQRL 154
Query: 142 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
VPGGTKMDTASMLDEAI YVKFLK+Q++ L+
Sbjct: 155 VPGGTKMDTASMLDEAIHYVKFLKKQVQSLE 185
>sp|Q9SND4|HEC2_ARATH Transcription factor HEC2 OS=Arabidopsis thaliana GN=HEC2 PE=1 SV=1
Length = 231
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/91 (73%), Positives = 83/91 (91%)
Query: 82 LGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRL 141
+ AM+EM++RIA MQP+ IDP +++ PKR+N+RIS DPQSVAARHRRE+ISE+IRILQRL
Sbjct: 92 MAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIRILQRL 151
Query: 142 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 172
VPGGTKMDTASMLDEAI YVKFLK+Q++ L+
Sbjct: 152 VPGGTKMDTASMLDEAIHYVKFLKKQVQSLE 182
>sp|Q8LEG1|BH054_ARATH Transcription factor bHLH54 OS=Arabidopsis thaliana GN=BHLH54 PE=2
SV=1
Length = 258
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 60/88 (68%)
Query: 103 TTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVK 162
T+++ R + DPQS+ AR RREKI+E+++ LQ LVP GTK+D ++ML+EA+ YVK
Sbjct: 161 TSVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVK 220
Query: 163 FLKRQIRLLQSNQCNIVGDDHYNKLSLG 190
FL+ QI+LL S+ + YN L +G
Sbjct: 221 FLQLQIKLLSSDDLWMYAPLAYNGLDMG 248
>sp|Q7XHI9|BH084_ARATH Transcription factor bHLH84 OS=Arabidopsis thaliana GN=BHLH84 PE=2
SV=1
Length = 328
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 56/73 (76%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
DPQS+ AR RRE+I+E++RILQ LVP GTK+D ++ML+EA++YVKFL+ QI+LL S+
Sbjct: 246 DPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLW 305
Query: 178 IVGDDHYNKLSLG 190
+ YN + +G
Sbjct: 306 MYAPIAYNGMDIG 318
>sp|Q7XAQ6|LAX_ORYSJ Transcription factor LAX PANICLE OS=Oryza sativa subsp. japonica
GN=LAX PE=1 SV=1
Length = 215
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 50/60 (83%)
Query: 114 RISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 173
++S DPQSVAAR RR +IS++ R+L+ LVPGG+KMDT SML++AI YVKFLK Q+ L Q+
Sbjct: 39 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVTLHQA 98
>sp|Q9M041|BH140_ARATH Transcription factor bHLH140 OS=Arabidopsis thaliana GN=BHLH140
PE=4 SV=1
Length = 912
Score = 85.1 bits (209), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 47/62 (75%)
Query: 107 KPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKR 166
K R +S DPQSVAAR RR +IS++ +ILQ +VPGG KMDT SMLDEAI YVKFLK
Sbjct: 35 KRSRSTSTLSTDPQSVAARDRRHRISDRFKILQSMVPGGAKMDTVSMLDEAISYVKFLKA 94
Query: 167 QI 168
QI
Sbjct: 95 QI 96
>sp|Q84WK0|BH085_ARATH Transcription factor bHLH85 OS=Arabidopsis thaliana GN=BHLH85 PE=2
SV=1
Length = 352
Score = 84.7 bits (208), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 57/76 (75%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
DPQS+ AR RRE+I+E++RILQ LVP GTK+D ++ML+EA+ YVKFL+ QI+LL S+
Sbjct: 275 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLW 334
Query: 178 IVGDDHYNKLSLGATT 193
+ +N + +G ++
Sbjct: 335 MYAPIAFNGMDIGLSS 350
>sp|Q3E7L7|BH139_ARATH Transcription factor bHLH139 OS=Arabidopsis thaliana GN=BHLH139
PE=4 SV=1
Length = 223
Score = 82.0 bits (201), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 65/97 (67%)
Query: 94 AMQPVDIDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASM 153
A+ V ++++ + N I+ DPQS+ AR RRE+I+++++ LQ LVP GTK+D ++M
Sbjct: 117 ALGLVSNTSKSLKRKAKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKVDISTM 176
Query: 154 LDEAIRYVKFLKRQIRLLQSNQCNIVGDDHYNKLSLG 190
L++A+ YVKFL+ QI+LL S + +N L++G
Sbjct: 177 LEDAVHYVKFLQLQIKLLSSEDLWMYAPLAHNGLNMG 213
>sp|Q9FJ00|BH086_ARATH Putative transcription factor bHLH086 OS=Arabidopsis thaliana
GN=BHLH86 PE=4 SV=2
Length = 307
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 55/76 (72%), Gaps = 8/76 (10%)
Query: 100 IDPTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIR 159
I P PK DPQS+AA++RRE+ISE++++LQ LVP GTK+D +ML++AI
Sbjct: 200 IKPKATTSPK--------DPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKAIG 251
Query: 160 YVKFLKRQIRLLQSNQ 175
YVKFL+ Q+++L +++
Sbjct: 252 YVKFLQVQVKVLAADE 267
>sp|Q9C707|BH083_ARATH Transcription factor bHLH83 OS=Arabidopsis thaliana GN=BHLH83 PE=2
SV=1
Length = 298
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 51/58 (87%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQ 175
DPQS+AA++RRE+ISE+++ILQ LVP GTK+D +ML++AI YVKFL+ Q+++L +++
Sbjct: 204 DPQSLAAKNRRERISERLKILQELVPNGTKVDLVTMLEKAISYVKFLQVQVKVLATDE 261
>sp|Q9ZUG9|BH066_ARATH Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2
SV=1
Length = 350
Score = 77.8 bits (190), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 20/138 (14%)
Query: 104 TIRKPKRRNIRI------SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEA 157
T+ P + +I + DP S+A R RRE+I+E+++ LQ LVP G K D ASMLDE
Sbjct: 127 TVAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEI 186
Query: 158 IRYVKFLKRQIRLLQSNQCNIVGDDHYNKLSLGATTNTTIATTTASASAAGALDPILGHS 217
I YVKFL+ Q+++L ++ LG + + + A S A ++G S
Sbjct: 187 IDYVKFLQLQVKVLSMSR-------------LGGAASVSSQISEAGGSHGNASSAMVGGS 233
Query: 218 LPFHGNRNSSFYFNHHEV 235
GN N S H+V
Sbjct: 234 -QTAGNSNDSVTMTEHQV 250
>sp|Q8S3D5|BH069_ARATH Transcription factor bHLH69 OS=Arabidopsis thaliana GN=BHLH69 PE=2
SV=2
Length = 310
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 107 KPKRRNIR-ISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
KPK R R + DP S+A R RRE+I+E+++ LQ LVP G K D ASMLDE I YVKFL+
Sbjct: 127 KPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQ 186
Query: 166 RQIRLL 171
Q+++L
Sbjct: 187 LQVKVL 192
>sp|Q9LSQ3|BH082_ARATH Transcription factor bHLH82 OS=Arabidopsis thaliana GN=BHLH82 PE=2
SV=1
Length = 297
Score = 73.9 bits (180), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 70/132 (53%), Gaps = 14/132 (10%)
Query: 102 PTTIRKPKRRNIRI-SDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRY 160
P +KP+ R R + DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE I Y
Sbjct: 91 PVVRQKPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEY 150
Query: 161 VKFLKRQIRLLQSNQCNIVGDDHYNKLSLGATTNTTIATTTASASAAGALDPILGHSLPF 220
V+FL+ Q+++L ++ G S+G N SA A G L+ +
Sbjct: 151 VRFLQLQVKVLSMSRLGGAG-------SVGPRLNGL------SAEAGGRLNALTAPCNGL 197
Query: 221 HGNRNSSFYFNH 232
+GN N++ N
Sbjct: 198 NGNGNATGSSNE 209
>sp|Q8GY61|BH063_ARATH Transcription factor bHLH63 OS=Arabidopsis thaliana GN=BHLH63 PE=2
SV=1
Length = 335
Score = 60.8 bits (146), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE+++ LQ LVPG K+ A MLDE I YV+ L+RQI L
Sbjct: 181 DSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFL 235
>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1
Length = 524
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 39/50 (78%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR++I+EK+R LQ L+P K+D ASMLDEAI Y+K L+ Q++++
Sbjct: 350 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIM 399
>sp|Q9SRT2|BH062_ARATH Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2
SV=1
Length = 456
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE++++LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 267 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 321
>sp|Q9M0R0|BH081_ARATH Transcription factor bHLH81 OS=Arabidopsis thaliana GN=BHLH81 PE=2
SV=1
Length = 262
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%), Gaps = 3/64 (4%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSNQ-- 175
P+S+A R RR +IS++IR LQ LVP K +TA ML+EA+ YVK L+RQI+ L Q
Sbjct: 194 PRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQELTEEQKR 253
Query: 176 CNIV 179
C +
Sbjct: 254 CTCI 257
>sp|Q9CAA9|BH049_ARATH Transcription factor bHLH49 OS=Arabidopsis thaliana GN=BHLH49 PE=2
SV=1
Length = 486
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE+++ LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 315 SLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 366
>sp|Q6NKN9|BH074_ARATH Transcription factor bHLH74 OS=Arabidopsis thaliana GN=BHLH74 PE=2
SV=1
Length = 366
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE++R+LQ LVPG K+ A MLDE I YV+ L++Q+ L
Sbjct: 218 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 269
>sp|Q9FJL4|BH078_ARATH Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=2
SV=1
Length = 498
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKI E++++LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 310 DSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 364
>sp|Q9ZPW3|BH064_ARATH Transcription factor bHLH64 OS=Arabidopsis thaliana GN=BHLH64 PE=2
SV=3
Length = 337
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKIS+K++ LQ +VPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 194 DRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFL 248
>sp|Q66GR3|BH130_ARATH Transcription factor bHLH130 OS=Arabidopsis thaliana GN=BHLH130
PE=1 SV=1
Length = 359
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
P+S+A R RR +ISE++R LQ LVP K +T+ MLD A+ Y+K L+RQ ++L N+ N
Sbjct: 289 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYKILNDNRAN 348
Query: 178 I 178
Sbjct: 349 C 349
>sp|Q0JXE7|BPE_ARATH Transcription factor BPE OS=Arabidopsis thaliana GN=BPE PE=2 SV=1
Length = 343
Score = 57.4 bits (137), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 60/109 (55%), Gaps = 9/109 (8%)
Query: 65 NNNNIIDQEEDEEPE-EELGAMKEMMYRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVA 123
N ID+ D + E E LG E + M+P D +R + + + D S+A
Sbjct: 98 NKRQKIDEVCDGKAEAESLGTETEQ--KKQQMEPTK-DYIHVRARRGQ----ATDSHSLA 150
Query: 124 ARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
R RREKISE+++ILQ LVPG K + A +LDE I Y++ L+RQ+ L
Sbjct: 151 ERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 199
>sp|Q9LK48|BH077_ARATH Transcription factor bHLH77 OS=Arabidopsis thaliana GN=BHLH77 PE=2
SV=1
Length = 371
Score = 57.4 bits (137), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE++ +LQ LVPG ++ A MLDE I YV+ L+RQ+ L
Sbjct: 200 DSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFL 254
>sp|Q93W88|BH137_ARATH Transcription factor bHLH137 OS=Arabidopsis thaliana GN=BHLH137
PE=2 SV=1
Length = 286
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKISE++R LQ LVPG K+ A MLDE I YV+ L+ Q+ L
Sbjct: 145 DSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFL 199
>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana GN=ALC PE=2 SV=1
Length = 210
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ + RR KI+EK++ LQ+L+P K D ASMLDEAI Y+K L+ Q++ L
Sbjct: 100 LSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTL 149
>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2
SV=1
Length = 399
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 125 RHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
R RR+KI+++++ LQ+LVP +K D ASMLDE I Y+K L+ Q+ ++
Sbjct: 223 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMM 269
>sp|Q93VJ4|BEE2_ARATH Transcription factor BEE 2 OS=Arabidopsis thaliana GN=BEE2 PE=2
SV=1
Length = 304
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
Query: 103 TTIRKPKRRNIRI----SDDPQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEA 157
+ I+KP ++R + D S+A R RREKIS+K++ LQ +VPG K+ A MLDE
Sbjct: 131 SEIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEI 190
Query: 158 IRYVKFLKRQIRLL 171
I YV+ L++Q+ L
Sbjct: 191 INYVQSLQQQVEFL 204
>sp|Q9C690|BH122_ARATH Transcription factor bHLH122 OS=Arabidopsis thaliana GN=BHLH122
PE=1 SV=1
Length = 379
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPG-GTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
P+S+A R RR KISE++R LQ LVP T+ +TA MLD A++Y+K L+ Q++ L+ ++
Sbjct: 314 PRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQVKALEESRAR 373
Query: 178 I 178
Sbjct: 374 C 374
>sp|Q9M0X8|BH114_ARATH Transcription factor bHLH114 OS=Arabidopsis thaliana GN=BHLH114
PE=2 SV=2
Length = 298
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 44/69 (63%)
Query: 127 RREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNIVGDDHYNK 186
R+EK+ ++I LQ+LV K DTAS+L+EA+ Y+KFL+ Q+ +L + + N +G +
Sbjct: 175 RKEKLGDRITALQQLVSPFGKTDTASVLNEAVEYIKFLQEQVTVLSNPEQNTIGSVQQQQ 234
Query: 187 LSLGATTNT 195
S + NT
Sbjct: 235 CSNKKSINT 243
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 8/111 (7%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL-QSNQCNIVG 180
++ + RR +I+EK++ LQ L+P K D ASMLDEAI Y+K L+ Q+++L N N+
Sbjct: 204 LSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRNGINL-- 261
Query: 181 DDHYNKLSLGATTNTTIATTTASASAAGALDPILGHSLPFHGNRNSSFYFN 231
+ L L TT + + A DP+L H+ F N+ N
Sbjct: 262 ----HPLCLPGTTLHPLQLSQIRPPEATN-DPLLNHTNQFASTSNAPEMIN 307
>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1
Length = 478
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 38/50 (76%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR++I+E+++ LQ L+P K D ASMLDEAI Y+K L+ QI+++
Sbjct: 291 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMM 340
>sp|Q8GZ13|BEE1_ARATH Transcription factor BEE 1 OS=Arabidopsis thaliana GN=BEE1 PE=2
SV=1
Length = 260
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RR KI+E++R LQ +VPG K M A+MLDE I YV+ L+ Q+ L
Sbjct: 154 DSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQVEFL 208
>sp|Q9LT67|BH113_ARATH Transcription factor bHLH113 OS=Arabidopsis thaliana GN=BHLH113
PE=2 SV=1
Length = 270
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%)
Query: 106 RKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
RKP ++ R + A+ R+E++ E+I LQ+LV K D AS+L EA+ Y+KFL+
Sbjct: 135 RKPGKKGKRNQEKSSVGIAKVRKERLGERIAALQQLVSPYGKTDAASVLHEAMGYIKFLQ 194
Query: 166 RQIRLLQS 173
QI++L S
Sbjct: 195 DQIQVLCS 202
>sp|Q9C8P8|BH080_ARATH Transcription factor bHLH80 OS=Arabidopsis thaliana GN=BHLH80 PE=1
SV=1
Length = 259
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 119 PQSVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSNQ 175
P+S+A R RR +IS++IR LQ LVP K +TA ML+EA+ YVK L+ QI+ L Q
Sbjct: 191 PRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQIQELTEQQ 248
>sp|Q8GWK7|BEE3_ARATH Transcription factor BEE 3 OS=Arabidopsis thaliana GN=BEE3 PE=2
SV=1
Length = 261
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RR KI+E+++ LQ +VPG K M A+MLDE I YV+ L+ Q+ L
Sbjct: 156 DSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFL 210
>sp|Q9SA82|BH052_ARATH Transcription factor bHLH52 OS=Arabidopsis thaliana GN=BHLH52 PE=2
SV=1
Length = 264
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 120 QSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCNI 178
QS+AAR RR +I+EK + L +L+PG K +TA M + A +YVKFL+ QI +LQ Q +
Sbjct: 139 QSIAARKRRRRITEKTQELGKLIPGSQKHNTAEMFNAAAKYVKFLQAQIEILQLKQTKM 197
>sp|Q9C670|BH076_ARATH Transcription factor bHLH76 OS=Arabidopsis thaliana GN=BHLH76 PE=2
SV=1
Length = 390
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 121 SVAARHRREKISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
S+A R RREKISE+++ LQ LVPG K+ A MLDE I YV+ L+ QI L
Sbjct: 235 SLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFL 286
>sp|Q9SVU7|BH056_ARATH Putative transcription factor bHLH056 OS=Arabidopsis thaliana
GN=BHLH56 PE=4 SV=2
Length = 445
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 17/101 (16%)
Query: 93 AAMQPVDIDPTTIRKPK----------------RRNIRISDDPQSVAARHRREKISEKIR 136
A +PV I P T K K R+ R ++ ++A R RREKI+EK++
Sbjct: 218 AETEPVQIQPATESKLKAREETHGTEEARGSTSRKRSRTAEM-HNLAERRRREKINEKMK 276
Query: 137 ILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSNQCN 177
LQ+L+P K S LD+AI YVK L+ QI+ + S N
Sbjct: 277 TLQQLIPRCNKSTKVSTLDDAIEYVKSLQSQIQGMMSPMMN 317
>sp|Q8VZ02|BH048_ARATH Transcription factor bHLH48 OS=Arabidopsis thaliana GN=BHLH48 PE=2
SV=1
Length = 327
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTKMD-TASMLDEAIRYVKFLKRQIRLLQSNQC 176
D S+A R RREKI+ ++++LQ LVPG K+ TA +LDE I +V+ L+RQ+ +L
Sbjct: 194 DNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQRQVEMLSMRLA 253
Query: 177 NIVGDDHYNKLSLGATTNTTIATTTASASAAGALD--PILGHSLPFHG 222
+ +N S+ A+ N ++ + +A + L P G+ P G
Sbjct: 254 AVNPRIDFNLDSILASENGSLMDGSFNAESYHQLQQWPFDGYHQPEWG 301
>sp|A4D998|BH075_ARATH Transcription factor bHLH75 OS=Arabidopsis thaliana GN=BHLH75 PE=2
SV=1
Length = 223
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
D S+A R RREKI+E+++ LQ LVPG K M A MLD I YV+ L+ QI L
Sbjct: 113 DSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIEFL 167
>sp|Q8VZ22|BH103_ARATH Transcription factor bHLH103 OS=Arabidopsis thaliana GN=BHLH103
PE=2 SV=1
Length = 301
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 73/134 (54%), Gaps = 4/134 (2%)
Query: 65 NNNNIIDQEEDEEPEEELGAMKEMM-YRIAAMQPVDIDPTTIRKPKRRNIRISDDPQSVA 123
N + +I + ++P+E++ A K + + A+ + +++ +P +R R+ +
Sbjct: 130 NESRMISVFDHQKPKEDMQACKSLTTCKRASEKSGELEDIESSQPLKRP-RLETPSHFPS 188
Query: 124 ARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQI--RLLQSNQCNIVGD 181
+ R+EK+ ++I LQ+LV K DTAS+L +AI Y+KFL+ QI ++ S N +G
Sbjct: 189 FKVRKEKLGDRITALQQLVSPFGKTDTASVLHDAIDYIKFLQEQITEKVSTSPHLNSIGS 248
Query: 182 DHYNKLSLGATTNT 195
+ S ++ NT
Sbjct: 249 GEQKQWSDKSSNNT 262
>sp|O22768|UNE12_ARATH Transcription factor UNE12 OS=Arabidopsis thaliana GN=UNE12 PE=2
SV=2
Length = 310
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 51/79 (64%)
Query: 102 PTTIRKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYV 161
PT+IR R + DP S+A R RRE+I+E+IR LQ LVP K D A+M+DE + YV
Sbjct: 139 PTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYV 198
Query: 162 KFLKRQIRLLQSNQCNIVG 180
KFL+ Q+++L ++ G
Sbjct: 199 KFLRLQVKVLSMSRLGGAG 217
>sp|Q9LV17|BH079_ARATH Transcription factor bHLH79 OS=Arabidopsis thaliana GN=BHLH79 PE=2
SV=1
Length = 281
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 10/83 (12%)
Query: 118 DPQSVAARHRREKISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLLQSNQC 176
D S+A R RREKISEK+ LQ ++PG K + A +LDE I Y++ L+RQ+ L S +
Sbjct: 162 DRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEFL-SMKL 220
Query: 177 NIVGDDHYNKLSLGATTNTTIAT 199
+V GA+T TI
Sbjct: 221 EVVNS--------GASTGPTIGV 235
>sp|Q8L5W8|PIL1_ARATH Transcription factor PIL1 OS=Arabidopsis thaliana GN=PIL1 PE=1 SV=1
Length = 416
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 11/102 (10%)
Query: 106 RKPKRRNIRISDDPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
RKP + R S + + R RR++ ++K+R LQ L+P K D AS+LDEAI+Y++ L+
Sbjct: 221 RKPVTKRKR-STEVHKLYERKRRDEFNKKMRALQDLLPNCYKDDKASLLDEAIKYMRTLQ 279
Query: 166 RQIRLLQSNQC-----NIVGDDHYNKLSLG-----ATTNTTI 197
Q++++ ++ HY+ + LG A T T+I
Sbjct: 280 LQVQMMSMGNGLIRPPTMLPMGHYSPMGLGMHMGAAATPTSI 321
>sp|Q1PF17|BH018_ARATH Transcription factor bHLH18 OS=Arabidopsis thaliana GN=BHLH18 PE=2
SV=1
Length = 305
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 28/130 (21%)
Query: 49 QPSSSTLLF---GDHNNNNNNNNIIDQEEDEE---PEEELGAMKEMMYRIAAMQPVDIDP 102
QPSS L F G H N+N+ N+I +DEE PE + +
Sbjct: 64 QPSSRILSFEKTGLHVMNHNSPNLIFSPKDEEIGLPEHKKAEL----------------- 106
Query: 103 TTIRKPKRRN--IRISDDPQS--VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAI 158
IR KR R + Q +A R RREK++++ L L+PG KMD AS+L +AI
Sbjct: 107 -IIRGTKRAQSLTRSQSNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAI 165
Query: 159 RYVKFLKRQI 168
+++K+L+ +
Sbjct: 166 KHIKYLQESV 175
>sp|Q9SVU6|BH023_ARATH Transcription factor bHLH23 OS=Arabidopsis thaliana GN=BHLH23 PE=2
SV=1
Length = 413
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%)
Query: 122 VAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
++ R RR+KI+E ++ LQ L+P TK D +SMLD+ I YVK L+ QI++
Sbjct: 284 LSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQIQMF 333
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.129 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,682,331
Number of Sequences: 539616
Number of extensions: 3744726
Number of successful extensions: 63414
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 263
Number of HSP's successfully gapped in prelim test: 201
Number of HSP's that attempted gapping in prelim test: 48483
Number of HSP's gapped (non-prelim): 13565
length of query: 236
length of database: 191,569,459
effective HSP length: 114
effective length of query: 122
effective length of database: 130,053,235
effective search space: 15866494670
effective search space used: 15866494670
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)