Query 047857
Match_columns 220
No_of_seqs 199 out of 1383
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 06:10:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047857.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047857hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ok3_A Peptidyl-prolyl CIS-tra 100.0 1E-43 3.5E-48 283.7 18.0 140 80-219 1-157 (161)
2 2fu0_A Cyclophilin, putative; 100.0 1.5E-43 5.2E-48 282.3 17.6 140 79-218 5-160 (160)
3 2x7k_A Peptidyl-prolyl CIS-tra 100.0 2.7E-43 9.3E-48 282.4 18.5 140 79-218 11-166 (166)
4 1zkc_A Peptidyl-prolyl CIS-tra 100.0 7.1E-43 2.4E-47 286.3 19.0 141 79-219 19-176 (197)
5 2a2n_A Peptidylprolyl isomeras 100.0 9.4E-43 3.2E-47 281.5 18.5 142 76-217 18-176 (176)
6 2poe_A Cyclophilin-like protei 100.0 7.2E-43 2.5E-47 284.3 18.0 141 79-219 16-176 (185)
7 2b71_A Cyclophilin-like protei 100.0 6.8E-43 2.3E-47 286.4 17.1 142 78-219 37-194 (196)
8 3bo7_A Peptidyl-prolyl CIS-tra 100.0 1.1E-42 3.9E-47 286.7 17.2 142 78-219 5-174 (201)
9 2k7n_A Peptidyl-prolyl CIS-tra 100.0 2.9E-42 1E-46 283.7 16.0 141 79-219 11-167 (203)
10 1w74_A Peptidyl-prolyl CIS-tra 100.0 7.7E-41 2.6E-45 273.3 17.1 135 80-217 24-191 (191)
11 3s6m_A Peptidyl-prolyl CIS-tra 100.0 5.9E-41 2E-45 269.3 15.3 137 79-217 3-167 (167)
12 2haq_A Cyclophilin; rotamase, 100.0 5.9E-41 2E-45 269.9 15.3 135 82-217 19-172 (172)
13 1lop_A Cyclophilin A; rotamase 100.0 5.7E-41 1.9E-45 268.6 13.3 135 82-218 2-164 (164)
14 1v9t_A Cyclophilin B; beta bar 100.0 9.1E-41 3.1E-45 267.9 14.5 138 79-218 4-166 (166)
15 1mzw_A Cyclophilin H, U-snRNP- 100.0 5.1E-40 1.7E-44 265.9 18.0 131 86-217 22-177 (177)
16 2hq6_A Serologically defined c 100.0 3.3E-40 1.1E-44 268.4 16.9 139 80-219 25-181 (185)
17 2wfi_A Peptidyl-prolyl CIS-tra 100.0 3.7E-40 1.3E-44 267.2 16.4 135 82-217 17-179 (179)
18 1a58_A Cyclophilin; isomerase, 100.0 6.6E-40 2.3E-44 265.3 16.6 135 82-217 14-176 (177)
19 2he9_A NK-tumor recognition pr 100.0 8.2E-40 2.8E-44 267.6 16.3 137 82-219 27-191 (192)
20 2cmt_A Peptidyl-prolyl CIS-tra 100.0 2.5E-39 8.4E-44 260.7 18.0 131 86-218 22-172 (172)
21 3ich_A Peptidyl-prolyl CIS-tra 100.0 1.3E-39 4.5E-44 265.6 16.3 132 85-217 26-177 (188)
22 3pmp_A Cyclophilin A; peptidyl 100.0 1.5E-39 5.1E-44 260.3 16.3 135 82-218 10-164 (164)
23 1qng_A Peptidyl-prolyl CIS-tra 100.0 3.2E-39 1.1E-43 259.7 17.8 130 86-217 15-170 (170)
24 2z6w_A Peptidyl-prolyl CIS-tra 100.0 2E-39 7E-44 259.7 16.3 134 83-218 12-165 (165)
25 2r99_A Peptidyl-prolyl CIS-tra 100.0 4.7E-39 1.6E-43 259.4 18.4 132 85-218 22-173 (173)
26 2igv_A Peptidyl-prolyl CIS-tra 100.0 5.4E-39 1.8E-43 259.1 18.3 132 85-218 14-172 (173)
27 3bkp_A Cyclophilin; malaria, i 100.0 1.9E-39 6.4E-44 272.3 15.3 139 80-219 22-194 (232)
28 3rdd_A Peptidyl-prolyl CIS-tra 100.0 2.2E-38 7.4E-43 257.7 18.3 136 81-218 24-184 (184)
29 4fru_A Cyclophilin B, peptidyl 100.0 2E-38 7E-43 258.3 18.1 133 85-218 23-175 (185)
30 2poy_A Peptidyl-prolyl CIS-tra 100.0 2.7E-38 9.3E-43 257.4 17.9 129 86-216 31-186 (186)
31 2c3b_A Ppiase, cyclophilin; is 100.0 2.3E-39 7.8E-44 261.0 10.5 133 84-217 17-172 (172)
32 3k2c_A Peptidyl-prolyl CIS-tra 100.0 3.1E-38 1E-42 258.5 17.1 132 85-218 38-191 (193)
33 1z81_A Cyclophilin; structural 100.0 5.2E-38 1.8E-42 262.6 17.8 138 79-217 59-229 (229)
34 2ose_A Probable peptidyl-proly 100.0 1.1E-37 3.7E-42 262.0 15.7 131 86-219 26-208 (234)
35 1ihg_A Cyclophilin 40; ppiase 100.0 2.6E-35 8.8E-40 262.3 16.9 138 80-219 16-186 (370)
36 3rfy_A Peptidyl-prolyl CIS-tra 100.0 6.7E-33 2.3E-37 245.3 8.6 140 70-220 161-357 (369)
37 2nnz_A Hypothetical protein; b 91.1 0.26 9E-06 38.0 4.7 105 80-194 30-142 (153)
38 1zx8_A Hypothetical protein TM 64.0 14 0.00048 27.6 5.6 103 80-194 13-123 (136)
39 3kop_A Uncharacterized protein 48.6 17 0.00058 28.6 3.8 32 80-111 22-55 (188)
40 3aa0_C 21MER peptide from leuc 37.0 7.3 0.00025 20.1 0.0 17 2-18 6-22 (26)
41 2khf_A PLNJ; anti-microbial, b 21.1 26 0.0009 17.9 0.4 14 104-117 3-16 (26)
42 2k9u_B Filamin-binding LIM pro 20.5 53 0.0018 17.1 1.5 13 158-170 7-19 (26)
No 1
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=100.00 E-value=1e-43 Score=283.67 Aligned_cols=140 Identities=26% Similarity=0.505 Sum_probs=132.0
Q ss_pred ceEEEEeccceEEEEEcCCCChHHHHHHHHHHhcCccc--------------cCCCCCCCCCCCcccCCccCCCCCCCCC
Q 047857 80 GHAVLNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFK--------------AGHSKDLAAADEWTSRGKIRSQLRTSPK 145 (220)
Q Consensus 80 ~~v~~~T~~G~i~ieL~~~~aP~~~~nF~~L~~~g~Y~--------------gGd~~~~g~~~~~~~~~~~~~e~~~~l~ 145 (220)
+.|+++|+.|+|+||||++.||+||+||++||++|||+ +||+.++|.++.+.++..+++|..+.++
T Consensus 1 m~v~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~l~ 80 (161)
T 2ok3_A 1 MSVTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGRGGNSIWGKKFEDEYSEYLK 80 (161)
T ss_dssp CEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSSSSCCCCTTSSCBCCCCCTTCC
T ss_pred CEEEEEeCCccEEEEEcCCCCcHHHHHHHHHhhhcccCCCEEEEEECCCEEecCCCCCCCCCCCcccCCccccccCcCcC
Confidence 45899999999999999999999999999999999999 8999988887777888889999877899
Q ss_pred CC-CeEEEeec-CCCCCCceEEEEcCCCCCCCCCccEEEEEecCHHHHHHHHhCCCCCC-CCCCCceEEEEEEEeeC
Q 047857 146 HE-AFMIGTVK-SKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEH-YQPKSDVGIINVTLKHA 219 (220)
Q Consensus 146 h~-~G~v~ma~-~~~~~~sqFfIt~~~~~~Ld~~~tVFG~Vv~Gmdvv~~I~~~~~~~~-~~P~~~i~I~~~~i~~d 219 (220)
|. +|+|+||+ +|++++|||||++.++||||++|+|||+|++|||||++|++.+++.+ ++|.++|+|.+|+|++|
T Consensus 81 h~~~G~lsma~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~P~~~v~I~~~~i~~~ 157 (161)
T 2ok3_A 81 HNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHAN 157 (161)
T ss_dssp SCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTTCCBSSCCBEEEEEEECC
T ss_pred cCCCeEEEEecCCCCCcceEEEEEcCCCCccCCCEeEEEEEeCCHHHHHHHHhCCccCCCCCcCCCeEEEEEEEecC
Confidence 85 99999999 89999999999999999999999999999999999999999999887 99999999999999976
No 2
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=100.00 E-value=1.5e-43 Score=282.27 Aligned_cols=140 Identities=29% Similarity=0.510 Sum_probs=131.5
Q ss_pred CceEEEEeccceEEEEEcCCCChHHHHHHHHHHhcCccc--------------cCCCCCCCCCCCcccCCccCCCCCCCC
Q 047857 79 PGHAVLNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFK--------------AGHSKDLAAADEWTSRGKIRSQLRTSP 144 (220)
Q Consensus 79 ~~~v~~~T~~G~i~ieL~~~~aP~~~~nF~~L~~~g~Y~--------------gGd~~~~g~~~~~~~~~~~~~e~~~~l 144 (220)
+..|+++|+.|+|+||||++.||+||+||++||+.|||+ +||+.++|.++.+.++..+++|....+
T Consensus 5 ~~~v~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~l 84 (160)
T 2fu0_A 5 PKSAIIYTTMGDIHISLFYKECKKTVQNFSVHSINGYYNNCIFHRVIKHFMVQTGDPSGDGTGGESIWGNEFEDEFFDHL 84 (160)
T ss_dssp CCEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSSSSCCCCTTSSCBCCCCBTTB
T ss_pred CCEEEEEecCccEEEEEeCCCChHHHHHHHHHhccCccCCCEEEEEECCCEEEeCCcCCCCCCCCcccCCCccccccCCc
Confidence 456999999999999999999999999999999999999 899988888777778888999987789
Q ss_pred CCC-CeEEEeec-CCCCCCceEEEEcCCCCCCCCCccEEEEEecCHHHHHHHHhCCCCCCCCCCCceEEEEEEEee
Q 047857 145 KHE-AFMIGTVK-SKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIINVTLKH 218 (220)
Q Consensus 145 ~h~-~G~v~ma~-~~~~~~sqFfIt~~~~~~Ld~~~tVFG~Vv~Gmdvv~~I~~~~~~~~~~P~~~i~I~~~~i~~ 218 (220)
+|. +|+|+||+ +|++++|||||++.++||||++|+|||+|++|||||++|++.+++.+++|.++|+|.+|+|++
T Consensus 85 ~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~~~v~~ 160 (160)
T 2fu0_A 85 NHSKPFMVSMANCGPNTNGSQFFITTVPCPWLDFKHTVFGKVTQGSKIVLDIEKVRTDKRDKPLEDIKILNIKINN 160 (160)
T ss_dssp CSSSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCCBEEEEEEC-
T ss_pred ccCCceEEEEecCCCCCcccEEEEECCCCCccCCCcEEEEEEEcCHHHHHHHHhCCcCCCCCcCCCeEEEEEEEeC
Confidence 998 79999999 899999999999999999999999999999999999999999999889999999999999864
No 3
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=100.00 E-value=2.7e-43 Score=282.37 Aligned_cols=140 Identities=27% Similarity=0.482 Sum_probs=132.3
Q ss_pred CceEEEEeccceEEEEEcCCCChHHHHHHHHHHhcCccc--------------cCCCCCCCCCCCcccCCccCCCCCCCC
Q 047857 79 PGHAVLNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFK--------------AGHSKDLAAADEWTSRGKIRSQLRTSP 144 (220)
Q Consensus 79 ~~~v~~~T~~G~i~ieL~~~~aP~~~~nF~~L~~~g~Y~--------------gGd~~~~g~~~~~~~~~~~~~e~~~~l 144 (220)
...|+++|+.|+|+||||++.||+||+||++||+.|||+ +||+.+++.++.+.++..+++|....+
T Consensus 11 ~~~v~l~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~l 90 (166)
T 2x7k_A 11 PPNVYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDELHPDL 90 (166)
T ss_dssp CSEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHHTTTTTEECCEEETTTEEEECCTTSSSSCCCCTTSSCBCCCCCTTS
T ss_pred CCEEEEEeCCCcEEEEEccCCCCHHHHHHHHHHhcCCCCCCEEEEEECCCEEEcCCCCCCCCCCCccCCCcccccccccc
Confidence 356999999999999999999999999999999999999 899998888887788888999987889
Q ss_pred CCC-CeEEEeec-CCCCCCceEEEEcCCCCCCCCCccEEEEEecCHHHHHHHHhCCCCCCCCCCCceEEEEEEEee
Q 047857 145 KHE-AFMIGTVK-SKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIINVTLKH 218 (220)
Q Consensus 145 ~h~-~G~v~ma~-~~~~~~sqFfIt~~~~~~Ld~~~tVFG~Vv~Gmdvv~~I~~~~~~~~~~P~~~i~I~~~~i~~ 218 (220)
+|. +|+|+||+ +||+++|||||++.++||||++|+|||+|++|||||++|++.+++++++|.++|+|.+|+|+.
T Consensus 91 ~h~~~G~lsmAn~gp~s~gSQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P~~~i~I~~~~i~~ 166 (166)
T 2x7k_A 91 KFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKIIKAYPSG 166 (166)
T ss_dssp CCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTSCBCTTSCBSSCCEEEEEEECC
T ss_pred CCCCCeEEEEeeCCCCCccceEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCCcCCCeEEEEEEEeC
Confidence 998 99999999 899999999999999999999999999999999999999999999889999999999999873
No 4
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=7.1e-43 Score=286.33 Aligned_cols=141 Identities=28% Similarity=0.457 Sum_probs=133.2
Q ss_pred CceEEEEeccceEEEEEcCCCChHHHHHHHHHHhcCccc--------------cCCCCCCCCCCCcccCCccCCCCCCCC
Q 047857 79 PGHAVLNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFK--------------AGHSKDLAAADEWTSRGKIRSQLRTSP 144 (220)
Q Consensus 79 ~~~v~~~T~~G~i~ieL~~~~aP~~~~nF~~L~~~g~Y~--------------gGd~~~~g~~~~~~~~~~~~~e~~~~l 144 (220)
...|+++|+.|+|+|+||++.||+||+||++||+.|||+ +||+.++|.++.+.++..+++|....+
T Consensus 19 ~~~v~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Ydg~~FhRVi~~f~iQgGd~~~~g~Gg~si~g~~f~dE~~~~l 98 (197)
T 1zkc_A 19 SGYVRLHTNKGDLNLELHCDLTPKTCENFIRLCKKHYYDGTIFHRSIRNFVIQGGDPTGTGTGGESYWGKPFKDEFRPNL 98 (197)
T ss_dssp CEEEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEEEEEEETTTEEEECCTTSSSSCCCBTTBSCBCCCCCTTC
T ss_pred CcEEEEEeCCccEEEEEcCCCCcHHHHHHHHHHhcCCCCCCEEEEEeCCCEEEcCCCCCCCCCCCccCCCccccccCcCc
Confidence 446999999999999999999999999999999999999 899998888877788888999987899
Q ss_pred CCC-CeEEEeec-CCCCCCceEEEEcCCCCCCCCCccEEEEEecCHHHHHHHHhCCCCCC-CCCCCceEEEEEEEeeC
Q 047857 145 KHE-AFMIGTVK-SKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEH-YQPKSDVGIINVTLKHA 219 (220)
Q Consensus 145 ~h~-~G~v~ma~-~~~~~~sqFfIt~~~~~~Ld~~~tVFG~Vv~Gmdvv~~I~~~~~~~~-~~P~~~i~I~~~~i~~d 219 (220)
+|. +|+|+||+ +|++++|||||++.++|+||++|+|||+|++|||||++|++.+++.+ ++|.++|+|.+|+|+.|
T Consensus 99 ~h~~~G~lsMAn~gp~sngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P~~~i~I~~~~v~~d 176 (197)
T 1zkc_A 99 SHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVESDPKTDRPKEEIRIDATTVFVD 176 (197)
T ss_dssp CSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTTCCBSSCCEEEEEEEEEC
T ss_pred CCCCceEEEEecCCCCCcccEEEEEcCCCCccCCCccEEEEEEcCHHHHHHHHcCCCCCCCCCcCCCeEEEEEEEEcC
Confidence 996 99999999 89999999999999999999999999999999999999999999987 99999999999999976
No 5
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=9.4e-43 Score=281.50 Aligned_cols=142 Identities=31% Similarity=0.563 Sum_probs=132.0
Q ss_pred CCCCceEEEEeccceEEEEEcCCCChHHHHHHHHHHhcCccc--------------cCCCCCCCCCCCcccCCccCCCCC
Q 047857 76 FDLPGHAVLNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFK--------------AGHSKDLAAADEWTSRGKIRSQLR 141 (220)
Q Consensus 76 ~~~~~~v~~~T~~G~i~ieL~~~~aP~~~~nF~~L~~~g~Y~--------------gGd~~~~g~~~~~~~~~~~~~e~~ 141 (220)
......|+++|+.|+|+||||++.||+||+||++||+.|||+ +||+.++|.++.+.++..+++|..
T Consensus 18 ~~~~~~v~~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~ 97 (176)
T 2a2n_A 18 KRVSDSAIIHTSMGDIHTKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGGESIWGGEFEDEFH 97 (176)
T ss_dssp CCCCSEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSSSSCCCCTTSSCBCCCCC
T ss_pred CCCCCEEEEEecCccEEEEEeCCCChHHHHHHHHHhhcCccCCCEEEEEECCcEEEccCCCCCCCCCCcccCCccccccc
Confidence 344556999999999999999999999999999999999999 899988888877788888999987
Q ss_pred CCCCCC-CeEEEeec-CCCCCCceEEEEcCCCCCCCCCccEEEEEecCHHHHHHHHhCCCC-CCCCCCCceEEEEEEEe
Q 047857 142 TSPKHE-AFMIGTVK-SKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTD-EHYQPKSDVGIINVTLK 217 (220)
Q Consensus 142 ~~l~h~-~G~v~ma~-~~~~~~sqFfIt~~~~~~Ld~~~tVFG~Vv~Gmdvv~~I~~~~~~-~~~~P~~~i~I~~~~i~ 217 (220)
..++|. +|+|+||+ +||+++|||||++.++||||++|+|||+|++|||||++|++.+++ .+++|.++|+|.+|+|.
T Consensus 98 ~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P~~~v~I~~v~v~ 176 (176)
T 2a2n_A 98 STLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIINITVK 176 (176)
T ss_dssp TTCCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTTCCBSSCCBEEEEEEC
T ss_pred cccccCCceEEEEEeCCCCCcccEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHcCCccCCCCccCCCeEEEEEEEC
Confidence 789997 79999999 899999999999999999999999999999999999999999998 68999999999999873
No 6
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=100.00 E-value=7.2e-43 Score=284.26 Aligned_cols=141 Identities=19% Similarity=0.408 Sum_probs=132.6
Q ss_pred CceEEEEeccceEEEEEcCCCChHHHHHHHHHHhcCccc--------------cCCCCCCCCCCCcccCCccCCCCCCCC
Q 047857 79 PGHAVLNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFK--------------AGHSKDLAAADEWTSRGKIRSQLRTSP 144 (220)
Q Consensus 79 ~~~v~~~T~~G~i~ieL~~~~aP~~~~nF~~L~~~g~Y~--------------gGd~~~~g~~~~~~~~~~~~~e~~~~l 144 (220)
.+.|+++|+.|+|+||||++.||+||+||++||+.|||+ +||+.++|.++.+.++..+++|....+
T Consensus 16 ~~~v~i~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~l 95 (185)
T 2poe_A 16 FQGVRIITNYGDLKFELFCSQCPKACKNFLALSASGYYKNTIFHKNIKGFIIQGGDPTGTGKGGESIYGRYFDDEIYPEL 95 (185)
T ss_dssp CCEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTEEEEEECTTSEEEEEETTSSSSCCCBTTBSCBCCCCCTTS
T ss_pred ceEEEEEecCccEEEEEeCCCCcHHHHHHHHHhccCCCCCCEEEEEECCCEEEcCCCCCCCCCCCccCCCcccccccCCC
Confidence 345999999999999999999999999999999999999 899988888777778888999987899
Q ss_pred CCC-CeEEEeec-C----CCCCCceEEEEcCCCCCCCCCccEEEEEecCHHHHHHHHhCCCCCCCCCCCceEEEEEEEee
Q 047857 145 KHE-AFMIGTVK-S----KDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIINVTLKH 218 (220)
Q Consensus 145 ~h~-~G~v~ma~-~----~~~~~sqFfIt~~~~~~Ld~~~tVFG~Vv~Gmdvv~~I~~~~~~~~~~P~~~i~I~~~~i~~ 218 (220)
+|. +|+|+||+ + |++++|||||++.++|+||++|+|||+|++|||||++|++.+++.+++|.++|+|.+|+|++
T Consensus 96 ~h~~~G~lsmA~~g~~~~p~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~v~I~~~~i~~ 175 (185)
T 2poe_A 96 KYDRRGILSMASKGASKKPNTNGSQFFITYSSLPQLNGEYVIFGKLIDGFETLNTLENCPSDKSHKPIDEIIIKDIVIHS 175 (185)
T ss_dssp CCCSTTEEEECCSCC-CCCSCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTSCBSSCCEEEEEEEEC
T ss_pred ccCCCeEEEEecCCCCCCCCCccceEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCcCCCeEEEEEEEEC
Confidence 996 99999999 6 99999999999999999999999999999999999999999999889999999999999997
Q ss_pred C
Q 047857 219 A 219 (220)
Q Consensus 219 d 219 (220)
|
T Consensus 176 d 176 (185)
T 2poe_A 176 N 176 (185)
T ss_dssp C
T ss_pred C
Confidence 5
No 7
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=6.8e-43 Score=286.41 Aligned_cols=142 Identities=24% Similarity=0.400 Sum_probs=131.6
Q ss_pred CCceEEEEeccceEEEEEcCCCChHHHHHHHHHHhcCccc--------------cCCCCCCCCCCCcccCCccCCCCCCC
Q 047857 78 LPGHAVLNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFK--------------AGHSKDLAAADEWTSRGKIRSQLRTS 143 (220)
Q Consensus 78 ~~~~v~~~T~~G~i~ieL~~~~aP~~~~nF~~L~~~g~Y~--------------gGd~~~~g~~~~~~~~~~~~~e~~~~ 143 (220)
....|+++|+.|+|+|+||++.||+||+||++||+.|||+ +||+.++|.++.+.++..+++|....
T Consensus 37 ~~~~V~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Y~g~~FhRVi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~ 116 (196)
T 2b71_A 37 ERGYITIYTNLGDFEVELYWYHSPKTCLNFYTLCEMGFYDNTIFHRVIPNFVIQGGDPTGTGKGGKSIYGEYFEDEINKE 116 (196)
T ss_dssp HSCEEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEEEEEEETTTEEEEEETTSSSSCCCBTTBSCBCCCCCTT
T ss_pred CCcEEEEEeCCCCEEEEEeCCCCcHHHHHHHHHhhcCCcCCCEEEEEeCCcEEEcCCCCCCCCCCCccCCCcccccccCC
Confidence 3457999999999999999999999999999999999999 89999888888777888899998788
Q ss_pred CCCC-CeEEEeec-CCCCCCceEEEEcCCCCCCCCCccEEEEEecCHHHHHHHHhCCCCCCCCCCCceEEEEEEEeeC
Q 047857 144 PKHE-AFMIGTVK-SKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIINVTLKHA 219 (220)
Q Consensus 144 l~h~-~G~v~ma~-~~~~~~sqFfIt~~~~~~Ld~~~tVFG~Vv~Gmdvv~~I~~~~~~~~~~P~~~i~I~~~~i~~d 219 (220)
++|. +|+|+||+ +||+++|||||++.++||||++|+|||+|++|||||++|++.+++.+++|.++|+|.+|+|++|
T Consensus 117 l~h~~~G~lsMAn~gpns~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~i~I~~~~i~~d 194 (196)
T 2b71_A 117 LKHTGAGILSMSNNGPNTNSSQFFITLAPLPHLDGKHTIFARVSKNMTCIENIASVQTTATNKPIFDLKILRTSTAVN 194 (196)
T ss_dssp CCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTCCBSSCCEEEEEEC---
T ss_pred cCcCCCeEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEecCHHHHHHHHhCCcCCCCCCCCCeEEEEEEEecC
Confidence 9996 99999998 8999999999999999999999999999999999999999999998899999999999999876
No 8
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=100.00 E-value=1.1e-42 Score=286.68 Aligned_cols=142 Identities=25% Similarity=0.410 Sum_probs=127.1
Q ss_pred CCceEEEEeccceEEEEEcCCCChHHHHHHHHHHhcCccc--------------cC-----CCCCCCCCCCccc------
Q 047857 78 LPGHAVLNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFK--------------AG-----HSKDLAAADEWTS------ 132 (220)
Q Consensus 78 ~~~~v~~~T~~G~i~ieL~~~~aP~~~~nF~~L~~~g~Y~--------------gG-----d~~~~g~~~~~~~------ 132 (220)
....|+++|+.|+|+|+||++.||+||+||++||+.|||+ +| |+.++|.++.+.+
T Consensus 5 ~~~~v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Ydg~~FhRvi~~f~iQgG~~~~~Dp~~~g~gg~si~~~~~~~ 84 (201)
T 3bo7_A 5 KKGYLRIVTTQGSLNIELHADMAPRACDSFLRLCAVKYFDDTIFHRCIRNFMIQGGRAELRQPSKKKEVQQSPRSISGFP 84 (201)
T ss_dssp CCEEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBEEEEETTTEEEECCGGGCCC-------CCSSCCCSST
T ss_pred CceEEEEEeCCCCEEEEEcCCCCcHHHHHHHHHHhcCccCCCEEEEeeCCCEEEcCcccccCCCCCCCCCcccccccccc
Confidence 3456999999999999999999999999999999999999 88 9988877777666
Q ss_pred -CCccCCCCCCCCCCC-CeEEEeec-CCCCCCceEEEEcCCCCCCCCCccEEEEEecCHHHHHHHHhCCCCCCCCCCCce
Q 047857 133 -RGKIRSQLRTSPKHE-AFMIGTVK-SKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDV 209 (220)
Q Consensus 133 -~~~~~~e~~~~l~h~-~G~v~ma~-~~~~~~sqFfIt~~~~~~Ld~~~tVFG~Vv~Gmdvv~~I~~~~~~~~~~P~~~i 209 (220)
+..+++|....++|. +|+|+||+ +||+++|||||++.++||||++|+|||+|++|||||++|++++++.+++|.++|
T Consensus 85 ~g~~f~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~i 164 (201)
T 3bo7_A 85 GGAPFEDEFDNRLVHQGIGVLSMANDGKHSNLSEFFITFKSCEHLNNKHTIFGRVVGGLDVLRQWEKLETDKKDKPLKPP 164 (201)
T ss_dssp TCCCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTCCBCTTSCBSSCC
T ss_pred CCCcccCcccCCCCcCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCceEEEEEecCHHHHHHHHhCCcCCCCCcCCCe
Confidence 678899977899996 99999999 899999999999999999999999999999999999999999999889999999
Q ss_pred EEEEEEEeeC
Q 047857 210 GIINVTLKHA 219 (220)
Q Consensus 210 ~I~~~~i~~d 219 (220)
+|.+|+|+.|
T Consensus 165 ~I~~~~v~~d 174 (201)
T 3bo7_A 165 KVEEIIVFKN 174 (201)
T ss_dssp BEEEEEEEEC
T ss_pred EEEEEEEEcC
Confidence 9999999976
No 9
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=100.00 E-value=2.9e-42 Score=283.72 Aligned_cols=141 Identities=27% Similarity=0.479 Sum_probs=133.0
Q ss_pred CceEEEEeccceEEEEEcCCCChHHHHHHHHHHhcCccc--------------cCCCCCCCCCCCcccCCccCCCCCCCC
Q 047857 79 PGHAVLNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFK--------------AGHSKDLAAADEWTSRGKIRSQLRTSP 144 (220)
Q Consensus 79 ~~~v~~~T~~G~i~ieL~~~~aP~~~~nF~~L~~~g~Y~--------------gGd~~~~g~~~~~~~~~~~~~e~~~~l 144 (220)
...|+++|+.|+|+||||++.||+||+||++||+.+||+ +||+.+++.++.+.++..+++|....+
T Consensus 11 ~~~V~l~T~~G~I~ieL~~d~aP~tv~NF~~L~~~g~Ydg~~FhRVi~~F~iQgGd~~~~g~gg~si~g~~f~dE~~~~l 90 (203)
T 2k7n_A 11 PPNVYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDELHPDL 90 (203)
T ss_dssp CSEEEEEESSCEEEEEECTTTCTTHHHHHHHHHHHTCGGGCEEEEEETTTEEEEECSSSSSSCCCTTSCSCBCCCCCCSS
T ss_pred CCEEEEEeCCCcEEEEEccCCCcHHHHHHHHHHhcCccCCCEEEEEeCCcEEEcCCCCCCCCCCCccCCCcccccccccc
Confidence 356999999999999999999999999999999999999 899988887777778888999987889
Q ss_pred CCC-CeEEEeec-CCCCCCceEEEEcCCCCCCCCCccEEEEEecCHHHHHHHHhCCCCCCCCCCCceEEEEEEEeeC
Q 047857 145 KHE-AFMIGTVK-SKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIINVTLKHA 219 (220)
Q Consensus 145 ~h~-~G~v~ma~-~~~~~~sqFfIt~~~~~~Ld~~~tVFG~Vv~Gmdvv~~I~~~~~~~~~~P~~~i~I~~~~i~~d 219 (220)
+|. +|+|+||+ +||+++|||||++.++||||++|+|||+|++|||||++|++.+++.+++|.++|+|.+|+|+++
T Consensus 91 ~h~~~G~lsMAn~gpnsngSQFFIt~~~~~~LDg~~tVFG~VveGmdvv~kI~~~~t~~~~~P~~~V~I~~~~v~~~ 167 (203)
T 2k7n_A 91 KFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKIIKAYPSGG 167 (203)
T ss_dssp CCCSSCEEEEEESSTTCEEEEEEEESSCCCSSTTTSCEEEEEESCHHHHHHHHSCCEEETTEECCCCBEEEEEECCC
T ss_pred cCCCCeEEEEeeCCCCCcccEEEEEcCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCCcCCCeEEEEEEEEec
Confidence 998 99999999 8999999999999999999999999999999999999999999998899999999999999874
No 10
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=100.00 E-value=7.7e-41 Score=273.31 Aligned_cols=135 Identities=24% Similarity=0.490 Sum_probs=124.7
Q ss_pred ceEEEEeccceEEEEEcCCCChHHHHHHHHHH---------------hcCccc--------------cCCCCCCCCCCCc
Q 047857 80 GHAVLNTSKGYIIVELFKDGSPETVDKFIDLC---------------QKGYFK--------------AGHSKDLAAADEW 130 (220)
Q Consensus 80 ~~v~~~T~~G~i~ieL~~~~aP~~~~nF~~L~---------------~~g~Y~--------------gGd~~~~g~~~~~ 130 (220)
..|+++|+.|+|+||||++.||+||+||++|| +.+||+ +||+.++|.++
T Consensus 24 ~~v~l~t~~G~I~ieL~~~~aP~tv~NF~~L~tG~~~~~~~~~g~~~~~~~Y~g~~FhRVi~~fmiQgGd~~g~G~gg-- 101 (191)
T 1w74_A 24 ATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGG-- 101 (191)
T ss_dssp EEEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTCSCCSSCCTTBSSSSCSSTTEEEEEEETTTEEEECCTTSSSSCC--
T ss_pred eEEEEEecceeEEEEEcCCCChHHHHHHHHHhcCCcccccccccccccCCccCCCEEEEEeCCCEEecCCCCCCCCCC--
Confidence 46999999999999999999999999999999 458999 89988766655
Q ss_pred ccCCccCCCCCCCCCCC-CeEEEeec-CCCCCCceEEEEcCCCCCCCCCccEEEEEec--CHHHHHHHHhCCCCCCCCCC
Q 047857 131 TSRGKIRSQLRTSPKHE-AFMIGTVK-SKDSKGFELYITTAPIPDLNDKLIVFGRVVK--GEDVVQEIEEVDTDEHYQPK 206 (220)
Q Consensus 131 ~~~~~~~~e~~~~l~h~-~G~v~ma~-~~~~~~sqFfIt~~~~~~Ld~~~tVFG~Vv~--Gmdvv~~I~~~~~~~~~~P~ 206 (220)
++..+++|..+.++|. +|+|+||+ +||+++|||||++.++||||++|+|||+|++ |||||++|++.+++.+++|.
T Consensus 102 -~g~~f~dE~~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~~Gmdvv~~I~~~~t~~~~~P~ 180 (191)
T 1w74_A 102 -PGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPT 180 (191)
T ss_dssp -SSCCBCCCCCTTCCSCSSSEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEECSHHHHHHHHHHHTSCBCTTSCBS
T ss_pred -CCCccccccccCCCcCCCcEEEEeeCCCCCccceEEEEcCCCcccCCCeeEEEEEEECCCHHHHHHHHcCCcCCCCCcC
Confidence 4667899977889997 99999999 8999999999999999999999999999999 99999999999999889999
Q ss_pred CceEEEEEEEe
Q 047857 207 SDVGIINVTLK 217 (220)
Q Consensus 207 ~~i~I~~~~i~ 217 (220)
++|+|.+|+|+
T Consensus 181 ~~v~I~~~~i~ 191 (191)
T 1w74_A 181 DPVVIESITIS 191 (191)
T ss_dssp SCCEEEEEEEC
T ss_pred CCeEEEEEEEC
Confidence 99999999985
No 11
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=100.00 E-value=5.9e-41 Score=269.29 Aligned_cols=137 Identities=26% Similarity=0.403 Sum_probs=124.0
Q ss_pred CceEEEEeccceEEEEEcCCCChHHHHHHHHHHhcCccc--------------cCCCCCCCCCCCcccCCccCCCCCCCC
Q 047857 79 PGHAVLNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFK--------------AGHSKDLAAADEWTSRGKIRSQLRTSP 144 (220)
Q Consensus 79 ~~~v~~~T~~G~i~ieL~~~~aP~~~~nF~~L~~~g~Y~--------------gGd~~~~g~~~~~~~~~~~~~e~~~~l 144 (220)
.+.|+++|+.|+|+||||++.||+||+||++||+.+||+ +||+.+++.. ..++..+++|....+
T Consensus 3 ~~~v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~~~~--~~~~~~~~~E~~~~l 80 (167)
T 3s6m_A 3 GSMVELHTNHGVIKLELDEAKAPKTVENFLNYVKKGHYDGTIFHRVINGFMIQGGGFEPGLKQ--KPTDAPIANEANNGL 80 (167)
T ss_dssp CCEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHHTTTTTEECCEEETTTEEEESSEETTTEE--CCCCCCBCCCGGGCC
T ss_pred CcEEEEEeCCceEEEEEeCCCCcHHHHHHHHHhhhcccCCCEeEEecCCcEEEeccccCCCCC--CCCCCccCCcccccc
Confidence 456999999999999999999999999999999999999 7888655432 234567888877789
Q ss_pred CCCCeEEEeec--CCCCCCceEEEEcCCCCCCCCC--------ccEEEEEecCHHHHHHHHhCCCCC----CCCCCCceE
Q 047857 145 KHEAFMIGTVK--SKDSKGFELYITTAPIPDLNDK--------LIVFGRVVKGEDVVQEIEEVDTDE----HYQPKSDVG 210 (220)
Q Consensus 145 ~h~~G~v~ma~--~~~~~~sqFfIt~~~~~~Ld~~--------~tVFG~Vv~Gmdvv~~I~~~~~~~----~~~P~~~i~ 210 (220)
+|.+|+|+||+ +||+++|||||++.+++|||++ |+|||+|++|||||++|++.++++ +++|.++|+
T Consensus 81 ~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~~~~~VFG~Vv~G~dvv~~I~~~~t~~~~~~~~~P~~~v~ 160 (167)
T 3s6m_A 81 KNDTYTIAMARTNDPHSATAQFFINVNDNEFLNHSSPTPQGWGYAVFGKVVEGQDIVDKIKAVKTGSKGFHQDVPNDDVV 160 (167)
T ss_dssp CCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTCCCCEEEEEEECHHHHHHHTTSCBBC---CBTCBSSCCE
T ss_pred cCCccEEEEecCCCCCCccceEEEEcCCchhcCCcccccCCCCceEEEEEEcCHHHHHHHHcCCcCCCcccCCCcCCCeE
Confidence 99999999998 6999999999999999999998 999999999999999999999987 689999999
Q ss_pred EEEEEEe
Q 047857 211 IINVTLK 217 (220)
Q Consensus 211 I~~~~i~ 217 (220)
|.+|+|+
T Consensus 161 I~~~~il 167 (167)
T 3s6m_A 161 IEKAVVV 167 (167)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 9999985
No 12
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=100.00 E-value=5.9e-41 Score=269.93 Aligned_cols=135 Identities=28% Similarity=0.474 Sum_probs=124.5
Q ss_pred EEEEeccceEEEEEcCCCChHHHHHHHHHH--hcCc-cc--------------cCC-CCCCCCCCCcccCCccCCCCCCC
Q 047857 82 AVLNTSKGYIIVELFKDGSPETVDKFIDLC--QKGY-FK--------------AGH-SKDLAAADEWTSRGKIRSQLRTS 143 (220)
Q Consensus 82 v~~~T~~G~i~ieL~~~~aP~~~~nF~~L~--~~g~-Y~--------------gGd-~~~~g~~~~~~~~~~~~~e~~~~ 143 (220)
.+.+|+.|+|+||||++.||+||+||++|| +.|| |+ +|| +.++|.++.+.++..+++| ...
T Consensus 19 ~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE-~~~ 97 (172)
T 2haq_A 19 MIDSEPLGRITIGLFGKDAPLTTENFRQLCTGEHGFGYKDSIFHRVIQNFMIQGGDFTNFDGTGGKSIYGEKFADE-NLN 97 (172)
T ss_dssp EETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTTSSSSCCCCSSSSCBCCC-CCC
T ss_pred EECCEecceEEEEEeCCCCcHHHHHHHHHhccCCCcccCCCEEEEEECCCEEecCCccCCCCCCCccccCCcccCc-CCC
Confidence 566899999999999999999999999999 6899 99 888 4566777777778888888 478
Q ss_pred CCCCCeEEEeec-CCCCCCceEEEEcCCCCCCCCCccEEEEEecCHHHHHHHHhCCCCCCCCCCCceEEEEEEEe
Q 047857 144 PKHEAFMIGTVK-SKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIINVTLK 217 (220)
Q Consensus 144 l~h~~G~v~ma~-~~~~~~sqFfIt~~~~~~Ld~~~tVFG~Vv~Gmdvv~~I~~~~~~~~~~P~~~i~I~~~~i~ 217 (220)
++|.+|+|+||+ +|++++|||||++.++|+||++|+|||+|++|||||++|++.+++++++|.++|+|.+|+++
T Consensus 98 l~h~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~~g~l 172 (172)
T 2haq_A 98 VKHFVGALSMANAGPNTNGSQFFITTAPTPWLDGRHVVFGKVLDGMDVVLRIEKTKTNSHDRPVKPVKIVASGEL 172 (172)
T ss_dssp SCCCTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGGCBSSCEEEEEEEEC
T ss_pred cccCceEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEeCCHHHHHHHHhCCcCCCCcCCCCeEEEEeEEC
Confidence 999999999999 89999999999999999999999999999999999999999999988999999999999975
No 13
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=100.00 E-value=5.7e-41 Score=268.59 Aligned_cols=135 Identities=27% Similarity=0.443 Sum_probs=122.3
Q ss_pred EEEEeccceEEEEEcCCCChHHHHHHHHHHhcCccc--------------cCCCCCCCCCCCcccCCccCCCCCCCCCCC
Q 047857 82 AVLNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFK--------------AGHSKDLAAADEWTSRGKIRSQLRTSPKHE 147 (220)
Q Consensus 82 v~~~T~~G~i~ieL~~~~aP~~~~nF~~L~~~g~Y~--------------gGd~~~~g~~~~~~~~~~~~~e~~~~l~h~ 147 (220)
|+++|+.|+|+||||++.||+||+||++||+.|||+ +||+..+. +...++..+++|....++|.
T Consensus 2 v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~~--g~~~~g~~~~dE~~~~l~~~ 79 (164)
T 1lop_A 2 VTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPGM--KQKATKEPIKNEANNGLKNT 79 (164)
T ss_dssp EEEEETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEECCEEETTTEEEESSEETTT--EECCCCCCBCCCCCSSCCCC
T ss_pred EEEEeCCCCEEEEEeCCCCcHHHHHHHHHHhcCCCCCCEEEEEeCCceEecCCcccCC--CcCCCCCccccccccccccC
Confidence 789999999999999999999999999999999999 78876322 23345677899987789999
Q ss_pred CeEEEeec--CCCCCCceEEEEcCCCCCCCCC--------ccEEEEEecCHHHHHHHHhCCCCC----CCCCCCceEEEE
Q 047857 148 AFMIGTVK--SKDSKGFELYITTAPIPDLNDK--------LIVFGRVVKGEDVVQEIEEVDTDE----HYQPKSDVGIIN 213 (220)
Q Consensus 148 ~G~v~ma~--~~~~~~sqFfIt~~~~~~Ld~~--------~tVFG~Vv~Gmdvv~~I~~~~~~~----~~~P~~~i~I~~ 213 (220)
+|+|+||+ +||+++|||||++.+++|||++ |+|||+|++|||||++|++.+++. +++|.++|+|.+
T Consensus 80 ~G~lsmA~~~~p~s~gSQFfI~~~~~~~Ld~~~~~~~~~~~tvFG~Vv~G~dvv~~I~~~~t~~~~~~~~~P~~~v~I~~ 159 (164)
T 1lop_A 80 RGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDEVDKIKGVATGRSGMHQDVPKEDVIIES 159 (164)
T ss_dssp TTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTSCCCEEEEEEECHHHHHHHHTSCEEEETTEEEEESSCCEEEE
T ss_pred ccEEEEeecCCCCCccceEEEEcCCccccCCccccccCCceEEEEEEecCHHHHHHHHhCCcCCccccCCCcCCCeEEEE
Confidence 99999997 6999999999999999999998 999999999999999999999875 489999999999
Q ss_pred EEEee
Q 047857 214 VTLKH 218 (220)
Q Consensus 214 ~~i~~ 218 (220)
|+|++
T Consensus 160 ~~v~~ 164 (164)
T 1lop_A 160 VTVSE 164 (164)
T ss_dssp EEECC
T ss_pred EEEeC
Confidence 99975
No 14
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=100.00 E-value=9.1e-41 Score=267.90 Aligned_cols=138 Identities=28% Similarity=0.436 Sum_probs=124.2
Q ss_pred CceEEEEeccceEEEEEcCCCChHHHHHHHHHHhcCccc--------------cCCCCCCCCCCCcccCCccCCCCCCCC
Q 047857 79 PGHAVLNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFK--------------AGHSKDLAAADEWTSRGKIRSQLRTSP 144 (220)
Q Consensus 79 ~~~v~~~T~~G~i~ieL~~~~aP~~~~nF~~L~~~g~Y~--------------gGd~~~~g~~~~~~~~~~~~~e~~~~l 144 (220)
...|+++|+.|+|+||||++.||+||+||++||+.|||+ +||+.+.+.+. .++..+++|....+
T Consensus 4 ~~~v~~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~~~~~--~~g~~~~dE~~~~l 81 (166)
T 1v9t_A 4 DPHVLLTTSAGNIELELDKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQGGGFTEQMQQK--KPNPPIKNEADNGL 81 (166)
T ss_dssp SCEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBEEEEETTTEEEESSBCTTCCBC--CCCCCBCCCGGGSC
T ss_pred CeEEEEEeCCccEEEEEcCCCCcHHHHHHHHHhccCCCCCCEEEEEECCcEEEcCCcCcCCCCC--CCCCcccccccccc
Confidence 346999999999999999999999999999999999999 88887654432 24567888887778
Q ss_pred CCCCeEEEeec--CCCCCCceEEEEcCCCCCCCCC-----ccEEEEEecCHHHHHHHHhCCCCC----CCCCCCceEEEE
Q 047857 145 KHEAFMIGTVK--SKDSKGFELYITTAPIPDLNDK-----LIVFGRVVKGEDVVQEIEEVDTDE----HYQPKSDVGIIN 213 (220)
Q Consensus 145 ~h~~G~v~ma~--~~~~~~sqFfIt~~~~~~Ld~~-----~tVFG~Vv~Gmdvv~~I~~~~~~~----~~~P~~~i~I~~ 213 (220)
+|.+|+|+||+ +||+++|||||++.+++|||++ |+|||+|++|||||++|++.++++ +++|.++|+|.+
T Consensus 82 ~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~~~~P~~~v~I~~ 161 (166)
T 1v9t_A 82 RNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPTHDVGPYQNVPSKPVVILS 161 (166)
T ss_dssp CCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSCCCCCEEEEEEECHHHHHHHHTSCEEEETTEEEEESSCCBEEE
T ss_pred cCCceEEEEeecCCCCCccceEEEEeCCccccCCccCcCCeeEEEEEecCHHHHHHHHhCCCCCCCccCCCcCCCeEEEE
Confidence 89999999998 5999999999999999999998 999999999999999999999976 479999999999
Q ss_pred EEEee
Q 047857 214 VTLKH 218 (220)
Q Consensus 214 ~~i~~ 218 (220)
|+|++
T Consensus 162 ~~v~~ 166 (166)
T 1v9t_A 162 ATVLP 166 (166)
T ss_dssp EEECC
T ss_pred EEEeC
Confidence 99974
No 15
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=100.00 E-value=5.1e-40 Score=265.91 Aligned_cols=131 Identities=24% Similarity=0.400 Sum_probs=121.5
Q ss_pred eccceEEEEEcCCCChHHHHHHHHHHhcCc--------cc--------------cCCCC-CCCCCCCcccCCccCCCCCC
Q 047857 86 TSKGYIIVELFKDGSPETVDKFIDLCQKGY--------FK--------------AGHSK-DLAAADEWTSRGKIRSQLRT 142 (220)
Q Consensus 86 T~~G~i~ieL~~~~aP~~~~nF~~L~~~g~--------Y~--------------gGd~~-~~g~~~~~~~~~~~~~e~~~ 142 (220)
|+.|+|+||||++.||+||+||++||+++| |+ +||+. +.|.++.+.++..+++|. .
T Consensus 22 t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~si~g~~f~dE~-~ 100 (177)
T 1mzw_A 22 QEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVASIYRGPFADEN-F 100 (177)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHTCCEETTEECSSTTCBCCEEETTTEEEECCTTTSSSCCCCCTTSSCBCCCC-C
T ss_pred eeceeEEEEEcCCCCcHHHHHHHHHHhcccCCcCccceECCCEEEEEECCCEEEcCCcccCCCCCCCccCCCcccCcc-c
Confidence 679999999999999999999999999998 98 88985 666666777788888886 5
Q ss_pred CCCCC-CeEEEeec-CCCCCCceEEEEcCCCCCCCCCccEEEEEecCHHHHHHHHhCCCCCCCCCCCceEEEEEEEe
Q 047857 143 SPKHE-AFMIGTVK-SKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIINVTLK 217 (220)
Q Consensus 143 ~l~h~-~G~v~ma~-~~~~~~sqFfIt~~~~~~Ld~~~tVFG~Vv~Gmdvv~~I~~~~~~~~~~P~~~i~I~~~~i~ 217 (220)
.++|. +|+|+||+ +||+++|||||++.++||||++|+|||+|++|||||++|++.+++.+++|.++|+|.+|+++
T Consensus 101 ~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~cG~l 177 (177)
T 1mzw_A 101 KLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQCGEM 177 (177)
T ss_dssp CSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGGCBSSCEEEEEEEEC
T ss_pred ccccCCCCEEEEccCCCCCcceEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCCCCCEEEEeceeC
Confidence 78998 99999999 89999999999999999999999999999999999999999999889999999999999975
No 16
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=100.00 E-value=3.3e-40 Score=268.42 Aligned_cols=139 Identities=22% Similarity=0.468 Sum_probs=128.9
Q ss_pred ceEEEEeccceEEEEEcCCCChHHHHHHHHHHhcCccc--------------cCCCCCCCCCCCcccCCccCCCCCCCCC
Q 047857 80 GHAVLNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFK--------------AGHSKDLAAADEWTSRGKIRSQLRTSPK 145 (220)
Q Consensus 80 ~~v~~~T~~G~i~ieL~~~~aP~~~~nF~~L~~~g~Y~--------------gGd~~~~g~~~~~~~~~~~~~e~~~~l~ 145 (220)
..|+++|+.|+|+||||++.||+||+||++||+.|||+ +||+.++|.++.+.++..+++|....++
T Consensus 25 ~~V~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~l~ 104 (185)
T 2hq6_A 25 GKVLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTGTGSGGESIYGAPFKDEFHSRLR 104 (185)
T ss_dssp CEEEEEETTEEEEEEEBTTTCHHHHHHHHHHHHTTTTTTEECCEEETTTEEEECCTTSSSSCCCCTTSSCBCCCCBTTBC
T ss_pred CEEEEEeCCccEEEEEeCCCCcHHHHHHHHHhhcCccCCCEEEEEECCCEEEcCCCCCCCCCCCcccCCccccccccCcc
Confidence 35999999999999999999999999999999999999 8999888887777788889999877888
Q ss_pred CC-CeEEEeec-CCCCCCceEEEEcCCCCCCCCCccEEEEEecCHHHH--HHHHhCCCCCCCCCCCceEEEEEEEeeC
Q 047857 146 HE-AFMIGTVK-SKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVV--QEIEEVDTDEHYQPKSDVGIINVTLKHA 219 (220)
Q Consensus 146 h~-~G~v~ma~-~~~~~~sqFfIt~~~~~~Ld~~~tVFG~Vv~Gmdvv--~~I~~~~~~~~~~P~~~i~I~~~~i~~d 219 (220)
|. +|+|+||+ +|++++|||||++.++|+||++|+|||+|+ ||+++ ++|++.+++.+++|.++|+|.+|+|++|
T Consensus 105 h~~~G~lsMA~~g~~s~gSQFFIt~~~~~~LDg~~tVFG~V~-G~~v~~~~~i~~~~~~~~~~P~~~v~I~~~~v~~~ 181 (185)
T 2hq6_A 105 FNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVT-GDTVYNMLRLSEVDIDDDERPHNPHKIKSCEVLFN 181 (185)
T ss_dssp SCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHHHHHHTTCSCBCTTSCBSSCCEEEEEEEEEC
T ss_pred cCCCeEEEEccCCCCCccceEEEECCCCCccCCCceEEEEEE-eCeeehhhHHhhCCcCCCCCCCCCeEEEEEEEeCC
Confidence 86 99999999 899999999999999999999999999999 88764 6889999988999999999999999976
No 17
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=100.00 E-value=3.7e-40 Score=267.17 Aligned_cols=135 Identities=32% Similarity=0.543 Sum_probs=123.4
Q ss_pred EEEEeccceEEEEEcCCCChHHHHHHHHHHh-----------cCccc--------------cCCCC-CCCCCCCcccCCc
Q 047857 82 AVLNTSKGYIIVELFKDGSPETVDKFIDLCQ-----------KGYFK--------------AGHSK-DLAAADEWTSRGK 135 (220)
Q Consensus 82 v~~~T~~G~i~ieL~~~~aP~~~~nF~~L~~-----------~g~Y~--------------gGd~~-~~g~~~~~~~~~~ 135 (220)
++.+|+.|+|+||||++.||+||+||++||+ .+||+ +||+. +.|.++.+.++..
T Consensus 17 ~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~ 96 (179)
T 2wfi_A 17 AINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGF 96 (179)
T ss_dssp EETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSSSSCCCCTTSSC
T ss_pred EECCccceEEEEEEcCCCCChHHHHHHHHhcCCcCcccccccCCeECCCEEEEEECCCEEEcccccCCCCCCCCcccCCc
Confidence 5667999999999999999999999999996 56898 89985 6666677777888
Q ss_pred cCCCCCCCCCCC-CeEEEeec-CCCCCCceEEEEcCCCCCCCCCccEEEEEecCHHHHHHHHhCCCCCCCCCCCceEEEE
Q 047857 136 IRSQLRTSPKHE-AFMIGTVK-SKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIIN 213 (220)
Q Consensus 136 ~~~e~~~~l~h~-~G~v~ma~-~~~~~~sqFfIt~~~~~~Ld~~~tVFG~Vv~Gmdvv~~I~~~~~~~~~~P~~~i~I~~ 213 (220)
+++|+ ..++|. +|+|+||+ +||+++|||||++.++||||++|+|||+|++|||||++|++.+++.+++|.++|+|.+
T Consensus 97 f~dE~-~~~~h~~~G~lsMAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~ 175 (179)
T 2wfi_A 97 FEDES-FAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPFAEVRILS 175 (179)
T ss_dssp BCCCC-CCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTSCBSSCEEEEE
T ss_pred ccccc-cCcCcCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCeeEEEEEeCCHHHHHHHHcCCCCCCCCCCCCeEEEe
Confidence 88886 578887 89999999 8999999999999999999999999999999999999999999998899999999999
Q ss_pred EEEe
Q 047857 214 VTLK 217 (220)
Q Consensus 214 ~~i~ 217 (220)
|+++
T Consensus 176 ~G~l 179 (179)
T 2wfi_A 176 CGEL 179 (179)
T ss_dssp EEEC
T ss_pred CeeC
Confidence 9875
No 18
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=100.00 E-value=6.6e-40 Score=265.30 Aligned_cols=135 Identities=31% Similarity=0.550 Sum_probs=122.5
Q ss_pred EEEEeccceEEEEEcCCCChHHHHHHHHHHhc--------C---ccc--------------cCCCC-CCCCCCCcccCCc
Q 047857 82 AVLNTSKGYIIVELFKDGSPETVDKFIDLCQK--------G---YFK--------------AGHSK-DLAAADEWTSRGK 135 (220)
Q Consensus 82 v~~~T~~G~i~ieL~~~~aP~~~~nF~~L~~~--------g---~Y~--------------gGd~~-~~g~~~~~~~~~~ 135 (220)
.+.+|+.|+|+||||++.||+||+||++||++ + ||+ +||+. +.|.++.+.++..
T Consensus 14 ~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~ 93 (177)
T 1a58_A 14 TIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKGDGTGGESIYGGM 93 (177)
T ss_dssp EETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCCCTTCBEEEEETTTEEEECCCSSSSSSCCCCTTSSC
T ss_pred EECCEeceeEEEEEcCCCCchHHHHHHHHhcCCcCcccccCCcceeCCCEEEEEECCCEEEeCCccCCCCCCCCcccCCc
Confidence 34467899999999999999999999999985 4 898 89985 6666667777888
Q ss_pred cCCCCCCCCCCC-CeEEEeec-CCCCCCceEEEEcCCCCCCCCCccEEEEEecCHHHHHHHHhCCCCCCCCCCCceEEEE
Q 047857 136 IRSQLRTSPKHE-AFMIGTVK-SKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIIN 213 (220)
Q Consensus 136 ~~~e~~~~l~h~-~G~v~ma~-~~~~~~sqFfIt~~~~~~Ld~~~tVFG~Vv~Gmdvv~~I~~~~~~~~~~P~~~i~I~~ 213 (220)
+++|. ..++|. +|+|+||+ +||+++|||||++.++||||++|+|||+|++|||||++|++.+++.+++|.++|+|.+
T Consensus 94 f~dE~-~~~~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~~~~~~~P~~~v~I~~ 172 (177)
T 1a58_A 94 FDDEE-FVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVTKIEYLKTNSKNRPLADVVILN 172 (177)
T ss_dssp BCCCC-CCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCEEEEE
T ss_pred ccCcc-cCcccCCCeEEEEeeCCCCCceeEEEEECCCCCccCCCEEEEEEEEcCHHHHHHHHhCCCCCCCcCCCCeEEEE
Confidence 88887 478886 99999999 8999999999999999999999999999999999999999999999899999999999
Q ss_pred EEEe
Q 047857 214 VTLK 217 (220)
Q Consensus 214 ~~i~ 217 (220)
|+++
T Consensus 173 ~G~l 176 (177)
T 1a58_A 173 CGEL 176 (177)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 9986
No 19
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=100.00 E-value=8.2e-40 Score=267.55 Aligned_cols=137 Identities=30% Similarity=0.527 Sum_probs=124.7
Q ss_pred EEEEeccceEEEEEcCCCChHHHHHHHHHHh-----------cCccc--------------cCCCC-CCCCCCCcccCCc
Q 047857 82 AVLNTSKGYIIVELFKDGSPETVDKFIDLCQ-----------KGYFK--------------AGHSK-DLAAADEWTSRGK 135 (220)
Q Consensus 82 v~~~T~~G~i~ieL~~~~aP~~~~nF~~L~~-----------~g~Y~--------------gGd~~-~~g~~~~~~~~~~ 135 (220)
.+.+|+.|+|+||||++.||+||+||++||+ .+||+ +||+. ++|.++.+.++..
T Consensus 27 ~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~Y~g~~FhRVi~~fmiQgGd~~~~~G~gg~siyg~~ 106 (192)
T 2he9_A 27 EINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGNGKGGESIYGGY 106 (192)
T ss_dssp EETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSSSSCCCCTTSSC
T ss_pred EECCEecceEEEEEcCCCCchHHHHHHHHhcCCCCcccccccCCeECCCEEEEEECCCEEEcCcccCCCCCCCCcccCCc
Confidence 5668999999999999999999999999996 56898 89985 5666777777888
Q ss_pred cCCCCCCCCCCC-CeEEEeec-CCCCCCceEEEEcCCCCCCCCCccEEEEEecCHHHHHHHHhCCCCCCCCCCCceEEEE
Q 047857 136 IRSQLRTSPKHE-AFMIGTVK-SKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIIN 213 (220)
Q Consensus 136 ~~~e~~~~l~h~-~G~v~ma~-~~~~~~sqFfIt~~~~~~Ld~~~tVFG~Vv~Gmdvv~~I~~~~~~~~~~P~~~i~I~~ 213 (220)
+++|+ ..++|. +|+|+||+ +||+++|||||++.++||||++|+|||+|++|||||++|++.+++.+++|.++|+|.+
T Consensus 107 f~dE~-~~l~h~~~G~lsMAn~gp~tngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~v~I~~ 185 (192)
T 2he9_A 107 FKDEN-FILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDAASRPYADVRVID 185 (192)
T ss_dssp BCCCC-CCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCEEEEE
T ss_pred ccCcc-ccCCCCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCccEEEEEEeCHHHHHHHHcCCcCCCCCCcCCeEEEE
Confidence 88886 578887 89999999 8999999999999999999999999999999999999999999998999999999999
Q ss_pred EEEeeC
Q 047857 214 VTLKHA 219 (220)
Q Consensus 214 ~~i~~d 219 (220)
|+++..
T Consensus 186 ~g~l~~ 191 (192)
T 2he9_A 186 CGVLAT 191 (192)
T ss_dssp EEECC-
T ss_pred eEEEcc
Confidence 999853
No 20
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=100.00 E-value=2.5e-39 Score=260.69 Aligned_cols=131 Identities=26% Similarity=0.378 Sum_probs=119.3
Q ss_pred eccceEEEEEcCCCChHHHHHHHHHHhc--Cc-cc--------------cCCCC-CCCCCCCcccCCccCCCCCCCCCCC
Q 047857 86 TSKGYIIVELFKDGSPETVDKFIDLCQK--GY-FK--------------AGHSK-DLAAADEWTSRGKIRSQLRTSPKHE 147 (220)
Q Consensus 86 T~~G~i~ieL~~~~aP~~~~nF~~L~~~--g~-Y~--------------gGd~~-~~g~~~~~~~~~~~~~e~~~~l~h~ 147 (220)
|+.|+|+||||++.||+||+||++||++ || |+ +||+. +.|.++.+.++..+++|. ..++|.
T Consensus 22 t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~si~g~~f~dE~-~~l~h~ 100 (172)
T 2cmt_A 22 GDAGRIVMELRSDIVPRTAENFRALCTGERGFGYHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIYGRKFDDEN-FQLRHE 100 (172)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSCBCCCC-CCSCCC
T ss_pred eecceEEEEEcCCCCCHHHHHHHHHhccCCCceECCCEEEEEECCCEEEcCCccCCCCCCCCccCCCcccccc-cCcccC
Confidence 8999999999999999999999999984 88 98 89986 556666666777888886 588997
Q ss_pred -CeEEEeec-CCCCCCceEEEEcCCCCCCCCCccEEEEEecCHHHHHHHHhCCCCCCCCCCCceEEEEEEEee
Q 047857 148 -AFMIGTVK-SKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIINVTLKH 218 (220)
Q Consensus 148 -~G~v~ma~-~~~~~~sqFfIt~~~~~~Ld~~~tVFG~Vv~Gmdvv~~I~~~~~~~~~~P~~~i~I~~~~i~~ 218 (220)
+|+|+||+ +||+++|||||++.++||||++|+|||+|++|||||++|++.+++ +++|.++|+|.+|++++
T Consensus 101 ~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~G~dvv~~I~~~~~~-~~~P~~~v~I~~~g~l~ 172 (172)
T 2cmt_A 101 GFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGSK-SGKVKEPVIISRCGELI 172 (172)
T ss_dssp STTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHGGGGCCT-TCCCSSCEEEEEEEEEC
T ss_pred CceEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCC-CCCCCCCEEEEEeEeEC
Confidence 79999999 899999999999999999999999999999999999999999885 68999999999999874
No 21
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=1.3e-39 Score=265.64 Aligned_cols=132 Identities=29% Similarity=0.472 Sum_probs=121.8
Q ss_pred EeccceEEEEEcCCCChHHHHHHHHHHh--cCc-cc--------------cCC-CCCCCCCCCcccCCccCCCCCCCCCC
Q 047857 85 NTSKGYIIVELFKDGSPETVDKFIDLCQ--KGY-FK--------------AGH-SKDLAAADEWTSRGKIRSQLRTSPKH 146 (220)
Q Consensus 85 ~T~~G~i~ieL~~~~aP~~~~nF~~L~~--~g~-Y~--------------gGd-~~~~g~~~~~~~~~~~~~e~~~~l~h 146 (220)
+|+.|+|+|+||++.||+||+||++||+ .|| |+ +|| +.++|.++.+.++..+++|. ..++|
T Consensus 26 ~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE~-~~l~h 104 (188)
T 3ich_A 26 DEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDEN-FKLKH 104 (188)
T ss_dssp TEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTTTSSSSCCCBTTBSCBCCCC-CCSCC
T ss_pred CEeceeEEEEEcCCCCcHHHHHHHHHhcccCCccccCCEEEEEECCCEEEcCCccCCCCCCCccccCCcccccc-cCccc
Confidence 4899999999999999999999999996 689 99 888 46667777777788898884 68888
Q ss_pred C-CeEEEeec-CCCCCCceEEEEcCCCCCCCCCccEEEEEecCHHHHHHHHhCCCCCCCCCCCceEEEEEEEe
Q 047857 147 E-AFMIGTVK-SKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIINVTLK 217 (220)
Q Consensus 147 ~-~G~v~ma~-~~~~~~sqFfIt~~~~~~Ld~~~tVFG~Vv~Gmdvv~~I~~~~~~~~~~P~~~i~I~~~~i~ 217 (220)
. +|+|+||+ +||+++|||||++.++||||++|+|||+|++|||||++|++.+++.+++|.++|+|.+|+++
T Consensus 105 ~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~~~~P~~~v~I~~~~~l 177 (188)
T 3ich_A 105 YGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRDKPLKDVIIADCGKI 177 (188)
T ss_dssp CSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCEEEEEEEEE
T ss_pred CCCeEEEEccCCCCCcccEEEEECCCCcccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCeECCCEEEEEeEEE
Confidence 6 99999999 89999999999999999999999999999999999999999999988999999999999988
No 22
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=100.00 E-value=1.5e-39 Score=260.34 Aligned_cols=135 Identities=21% Similarity=0.442 Sum_probs=121.9
Q ss_pred EEEEeccceEEEEEcCCCChHHHHHHHHHHh--cCc-cc--------------cCC-CCCCCCCCCcccCCccCCCCCCC
Q 047857 82 AVLNTSKGYIIVELFKDGSPETVDKFIDLCQ--KGY-FK--------------AGH-SKDLAAADEWTSRGKIRSQLRTS 143 (220)
Q Consensus 82 v~~~T~~G~i~ieL~~~~aP~~~~nF~~L~~--~g~-Y~--------------gGd-~~~~g~~~~~~~~~~~~~e~~~~ 143 (220)
.+..|+.|+|+||||++.||+||+||++||+ .|| |+ +|| +.+.+.++.+.++..+++|. ..
T Consensus 10 ~i~~t~~G~i~ieL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~~~~dE~-~~ 88 (164)
T 3pmp_A 10 SINDKPEGRIVFKLYDEAVPKTAKNFRELATGQHGFGYKDSIFHRVIPQFMLQGGDFTRHNGTGGKSIYGEKFADEN-FQ 88 (164)
T ss_dssp EETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSCBCCCC-CC
T ss_pred EECCEEeeEEEEEEeCCCCcHHHHHHHHHhcccCCCcccCCEEEEEECCCeEEeCCCCCCCCCCCcccCCccccccc-cc
Confidence 3445999999999999999999999999999 788 99 888 45667777777788888884 68
Q ss_pred CCCC-CeEEEeec-CCCCCCceEEEEcCCCCCCCCCccEEEEEecCHHHHHHHHhCCCCCCCCCCCceEEEEEEEee
Q 047857 144 PKHE-AFMIGTVK-SKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIINVTLKH 218 (220)
Q Consensus 144 l~h~-~G~v~ma~-~~~~~~sqFfIt~~~~~~Ld~~~tVFG~Vv~Gmdvv~~I~~~~~~~~~~P~~~i~I~~~~i~~ 218 (220)
++|. +|+|+||+ +|++++|||||++.++||||++|+|||+|++|||||++|++.+++ +++|.++|+|.+|++++
T Consensus 89 l~h~~~G~lsma~~g~~t~~SQFfIt~~~~~~Ld~~~~vFG~Vv~G~~vv~~I~~~~~~-~~~P~~~v~I~~cg~l~ 164 (164)
T 3pmp_A 89 VKHTKPGLLSMANAGANTNGSQFFITTVPTSWLDGKHVVFGEVIEGLDIVRKVEGKGSA-SGKTNATIKITDCGTVA 164 (164)
T ss_dssp SCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT-TCCCSSCEEEEEEEEC-
T ss_pred cCcCCCcEEEEeeCCCCCcccEEEEECCCChhhCCCccEEEEEeCCHHHHHHHHhCCCC-CCCcccCEEEEeCeEEC
Confidence 8998 69999999 899999999999999999999999999999999999999999986 78999999999999874
No 23
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=100.00 E-value=3.2e-39 Score=259.68 Aligned_cols=130 Identities=27% Similarity=0.432 Sum_probs=118.6
Q ss_pred eccceEEEEEcCCCChHHHHHHHHHHh-cCc--------cc--------------cCCCC-CCCCCCCcccCCccCCCCC
Q 047857 86 TSKGYIIVELFKDGSPETVDKFIDLCQ-KGY--------FK--------------AGHSK-DLAAADEWTSRGKIRSQLR 141 (220)
Q Consensus 86 T~~G~i~ieL~~~~aP~~~~nF~~L~~-~g~--------Y~--------------gGd~~-~~g~~~~~~~~~~~~~e~~ 141 (220)
|+.|+|+||||++.||+||+||++||+ .+| |+ +||+. +.|.++.+.++..+++|.
T Consensus 15 ~~~G~i~ieL~~~~aP~t~~NF~~L~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE~- 93 (170)
T 1qng_A 15 SNAGRIIFELFSDITPRTCENFRALCTGEKIGSRGKNLHYKNSIFHRIIPQFMCQGGDITNGNGSGGESIYGRSFTDEN- 93 (170)
T ss_dssp SEEEEEEEEECTTTCHHHHHHHHHHHHTCEECTTSSEECCTTCBCCEEETTTEEEECCTTTSSSSCCCBTTBSCBCCCC-
T ss_pred EeceeEEEEEcCCCCCHHHHHHHHHhccCCcCccCccceECCCEEEEEECCCEEEcCCccCCCCCCCccccCCcccccc-
Confidence 449999999999999999999999998 488 98 89985 566666777788888886
Q ss_pred CCCCCC-CeEEEeec-CCCCCCceEEEEcCCCCCCCCCccEEEEEecCHHHHHHHHhCCCCCCCCCCCceEEEEEEEe
Q 047857 142 TSPKHE-AFMIGTVK-SKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIINVTLK 217 (220)
Q Consensus 142 ~~l~h~-~G~v~ma~-~~~~~~sqFfIt~~~~~~Ld~~~tVFG~Vv~Gmdvv~~I~~~~~~~~~~P~~~i~I~~~~i~ 217 (220)
..++|. +|+|+||+ +||+++|||||++.++||||++|+|||+|++|||||++|++.++ .+++|.++|+|.+|+++
T Consensus 94 ~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~t-~~~~P~~~v~I~~cG~l 170 (170)
T 1qng_A 94 FNMKHDQPGLLSMANAGPNTNSSQFFITLVPCPWLDGKHVVFGKVIEGMNVVREMEKEGA-KSGYVKRSVVITDCGEL 170 (170)
T ss_dssp CCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCC-TTCCCSSCEEEEEEEEC
T ss_pred cccccCCCCEEEEeecCCCCcccEEEEECCCCcccCCCeeEEEEEECCHHHHHHHHhCCC-CCCCCCCCeEEEeceeC
Confidence 588998 89999999 89999999999999999999999999999999999999999999 67899999999999875
No 24
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=100.00 E-value=2e-39 Score=259.69 Aligned_cols=134 Identities=24% Similarity=0.392 Sum_probs=120.8
Q ss_pred EEEeccceEEEEEcCCCChHHHHHHHHHHh--cCc-cc--------------cCCCC-CCCCCCCcccCCccCCCCCCCC
Q 047857 83 VLNTSKGYIIVELFKDGSPETVDKFIDLCQ--KGY-FK--------------AGHSK-DLAAADEWTSRGKIRSQLRTSP 144 (220)
Q Consensus 83 ~~~T~~G~i~ieL~~~~aP~~~~nF~~L~~--~g~-Y~--------------gGd~~-~~g~~~~~~~~~~~~~e~~~~l 144 (220)
+.+|+.|+|+||||++.||+||+||++||+ .+| |+ +||+. +.|.++.+.++..+++|. ..+
T Consensus 12 i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE~-~~l 90 (165)
T 2z6w_A 12 ANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDEN-FTL 90 (165)
T ss_dssp ETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSCBCCCC-CCS
T ss_pred ECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCCCccCcCCEEEEEECCCEEEeCCccCCCCCCCCcccCCcccCcc-ccc
Confidence 345689999999999999999999999999 899 99 88985 456666666777888885 689
Q ss_pred CCC-CeEEEeec-CCCCCCceEEEEcCCCCCCCCCccEEEEEecCHHHHHHHHhCCCCCCCCCCCceEEEEEEEee
Q 047857 145 KHE-AFMIGTVK-SKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIINVTLKH 218 (220)
Q Consensus 145 ~h~-~G~v~ma~-~~~~~~sqFfIt~~~~~~Ld~~~tVFG~Vv~Gmdvv~~I~~~~~~~~~~P~~~i~I~~~~i~~ 218 (220)
+|. +|+|+||+ +|++++|||||++.++||||++|+|||+|++|||||++|++.++ .+++|.++|+|.+|+++.
T Consensus 91 ~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~~-~~~~P~~~v~I~~~g~l~ 165 (165)
T 2z6w_A 91 KHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIEGMDVVKKIESFGS-KSGRTSKKIVITDCGQLS 165 (165)
T ss_dssp CCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCC-TTSCCSSCEEEEEEEECC
T ss_pred ccCCCCEEEEeeCCCCCcccEEEEEcCCCcccCCCeeEEEEEEcCHHHHHHHHhCCC-CCCCCCCcEEEEEeEEEC
Confidence 998 79999999 89999999999999999999999999999999999999999985 578999999999999873
No 25
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=100.00 E-value=4.7e-39 Score=259.35 Aligned_cols=132 Identities=27% Similarity=0.372 Sum_probs=119.1
Q ss_pred EeccceEEEEEcCCCChHHHHHHHHHHh--cCc-cc--------------cCCCC-CCCCCCCcccCCccCCCCCCCCCC
Q 047857 85 NTSKGYIIVELFKDGSPETVDKFIDLCQ--KGY-FK--------------AGHSK-DLAAADEWTSRGKIRSQLRTSPKH 146 (220)
Q Consensus 85 ~T~~G~i~ieL~~~~aP~~~~nF~~L~~--~g~-Y~--------------gGd~~-~~g~~~~~~~~~~~~~e~~~~l~h 146 (220)
+|+.|+|+||||++.||+||+||++||+ .|| |+ +||+. +.|.++.+.++..+++|. ..++|
T Consensus 22 ~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE~-~~l~h 100 (173)
T 2r99_A 22 NKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDEN-FILKH 100 (173)
T ss_dssp TEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSCBCCCC-CCSCC
T ss_pred CccceeEEEEECCCCCcHHHHHHHHHhcccCCceecCCEEEEeeCCCEEEeCCcCCCCCCCCCccCCCcccCcc-cCccc
Confidence 3899999999999999999999999995 687 98 88986 456666667777888886 57888
Q ss_pred C-CeEEEeec-CCCCCCceEEEEcCCCCCCCCCccEEEEEecCHHHHHHHHhCCCCCCCCCCCceEEEEEEEee
Q 047857 147 E-AFMIGTVK-SKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIINVTLKH 218 (220)
Q Consensus 147 ~-~G~v~ma~-~~~~~~sqFfIt~~~~~~Ld~~~tVFG~Vv~Gmdvv~~I~~~~~~~~~~P~~~i~I~~~~i~~ 218 (220)
. +|+|+||+ +||+++|||||++.++||||++|+|||+|++|||||++|++.+++ +++|.++|+|.+|+++.
T Consensus 101 ~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~-~~~P~~~v~I~~cG~l~ 173 (173)
T 2r99_A 101 TGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSK-DGKPKQKVIIADCGEYV 173 (173)
T ss_dssp CSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT-TCCCSSCEEEEEEEECC
T ss_pred CCCcEEEEccCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCC-CCCCCCCeEEEEeeeEC
Confidence 7 89999999 899999999999999999999999999999999999999999875 57999999999999873
No 26
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=100.00 E-value=5.4e-39 Score=259.07 Aligned_cols=132 Identities=27% Similarity=0.426 Sum_probs=119.4
Q ss_pred EeccceEEEEEcCCCChHHHHHHHHHHhc--C--------ccc--------------cCCCC-CCCCCCCcccCCccCCC
Q 047857 85 NTSKGYIIVELFKDGSPETVDKFIDLCQK--G--------YFK--------------AGHSK-DLAAADEWTSRGKIRSQ 139 (220)
Q Consensus 85 ~T~~G~i~ieL~~~~aP~~~~nF~~L~~~--g--------~Y~--------------gGd~~-~~g~~~~~~~~~~~~~e 139 (220)
.|+.|+|+||||++.||+||+||++||++ | ||+ +||+. +.|.++.+.++..+++|
T Consensus 14 ~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~siyg~~f~dE 93 (173)
T 2igv_A 14 GKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTGGESIYGEKFPDE 93 (173)
T ss_dssp TEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSSSCCCBTTBSCBCCC
T ss_pred CEecceEEEEEeCCCCcHHHHHHHHHhcCCCCCCccCccceECCCEEEEEECCCEEEcCCCCCCCCCCCCccCCCcccCc
Confidence 34599999999999999999999999987 5 788 89986 56666666778888888
Q ss_pred CCCCCCCC-CeEEEeec-CCCCCCceEEEEcCCCCCCCCCccEEEEEecCHHHHHHHHhCCCCCCCCCCCceEEEEEEEe
Q 047857 140 LRTSPKHE-AFMIGTVK-SKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIINVTLK 217 (220)
Q Consensus 140 ~~~~l~h~-~G~v~ma~-~~~~~~sqFfIt~~~~~~Ld~~~tVFG~Vv~Gmdvv~~I~~~~~~~~~~P~~~i~I~~~~i~ 217 (220)
. ..++|. +|+|+||+ +||+++|||||++.++||||++|+|||+|++|||||++|++.+++ +++|.++|+|.+|+++
T Consensus 94 ~-~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~-~~~P~~~v~I~~~g~l 171 (173)
T 2igv_A 94 N-FKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESNGSQ-SGKPVKDCMIADCGQL 171 (173)
T ss_dssp C-CCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT-TSCCSSCEEEEEEEEE
T ss_pred c-cccCCCCCeEEEEeeCCCCCcceEEEEEcCCccccCCCeeEEEEEecCHHHHHHHHhCCCC-CCCCCCCEEEEEeEEE
Confidence 6 589998 89999999 899999999999999999999999999999999999999999884 6899999999999998
Q ss_pred e
Q 047857 218 H 218 (220)
Q Consensus 218 ~ 218 (220)
+
T Consensus 172 ~ 172 (173)
T 2igv_A 172 K 172 (173)
T ss_dssp C
T ss_pred c
Confidence 5
No 27
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.9e-39 Score=272.29 Aligned_cols=139 Identities=23% Similarity=0.416 Sum_probs=127.1
Q ss_pred ceEEEEeccceEEEEEcCCCChHHHHHHHHHHhcCccc--------------cCCCCCCCCCCCccc--CCccCCCCCCC
Q 047857 80 GHAVLNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFK--------------AGHSKDLAAADEWTS--RGKIRSQLRTS 143 (220)
Q Consensus 80 ~~v~~~T~~G~i~ieL~~~~aP~~~~nF~~L~~~g~Y~--------------gGd~~~~g~~~~~~~--~~~~~~e~~~~ 143 (220)
..|+++|+.|+|+|+||++.||+||+||++||+.|||+ +||+.++|.++.+.+ +..+++|....
T Consensus 22 ~~V~l~T~~G~I~ieL~~d~aP~tv~NF~~L~~~g~Ydgt~FhRVi~~FmiQgGdp~~~G~Gg~si~~~g~~f~dE~~~~ 101 (232)
T 3bkp_A 22 GKVVLHTSLGDLDVELWARECPLACRNFVQLCLEGYYVNTIFHRVVKDFIVQGGDPTGTGRGGADTTFDGKPFDVETHPR 101 (232)
T ss_dssp CEEEEEETTEEEEEEEBTTTCHHHHHHHHHHHHHTTTTTCBEEEEETTTEEEECCTTSSSSCCCCCTTTTCCBCCCCCTT
T ss_pred CEEEEEECCCcEEEEEcCCCCcHHHHHHHHHhhcCccCCCEEEEEeCCCEEEcCCCCCCCCCCCccccCCCccCCccccC
Confidence 45999999999999999999999999999999999999 899998888777777 77899998778
Q ss_pred CCCC-CeEEEeec-CC--------------CCCCceEEEEcCCCCCCCCCccEEEEEecCHHH--HHHHHhCCCCCCCCC
Q 047857 144 PKHE-AFMIGTVK-SK--------------DSKGFELYITTAPIPDLNDKLIVFGRVVKGEDV--VQEIEEVDTDEHYQP 205 (220)
Q Consensus 144 l~h~-~G~v~ma~-~~--------------~~~~sqFfIt~~~~~~Ld~~~tVFG~Vv~Gmdv--v~~I~~~~~~~~~~P 205 (220)
++|. +|+|+||+ ++ ++++|||||++.++||||++|+|||+|+ ||+| |++|++++++.+++|
T Consensus 102 l~h~~~G~lsMA~~g~~~~~~~n~e~g~~~~sngSQFFIt~~~~p~LDg~~tVFG~Vv-g~~v~~v~kI~~~~t~~~~~P 180 (232)
T 3bkp_A 102 LKFRYRGLVGVANLGRSSKDAENDERGRSLGTNGNQFFITLARADVLNNAYTLFGKVT-GHTLYNLMKFNDLEVGKEDRP 180 (232)
T ss_dssp CCCCSTTEEEECCCC----------------CBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHHHHHHHTTSCBCGGGCB
T ss_pred cCcCCCeEEEEeccCCcccccccccccccCCCcCCEEEEECCCCcccCCCccEEEEEE-eCchHHHHHHHcCCcCCCCCc
Confidence 9987 99999999 55 6999999999999999999999999999 7765 899999999989999
Q ss_pred CCceEEEEEEEeeC
Q 047857 206 KSDVGIINVTLKHA 219 (220)
Q Consensus 206 ~~~i~I~~~~i~~d 219 (220)
.++|+|.+|+|++|
T Consensus 181 ~~~i~I~~~~vl~d 194 (232)
T 3bkp_A 181 MTPPFIKSVDVLWN 194 (232)
T ss_dssp SSCCBEEEEEEEEC
T ss_pred CCCeEEEEEEEEcC
Confidence 99999999999976
No 28
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=100.00 E-value=2.2e-38 Score=257.75 Aligned_cols=136 Identities=21% Similarity=0.340 Sum_probs=121.2
Q ss_pred eEEEEec-----cceEEEEEcCCCChHHHHHHHHHHhcCc---cc--------------cCCC-CCCCCCCCcccCCccC
Q 047857 81 HAVLNTS-----KGYIIVELFKDGSPETVDKFIDLCQKGY---FK--------------AGHS-KDLAAADEWTSRGKIR 137 (220)
Q Consensus 81 ~v~~~T~-----~G~i~ieL~~~~aP~~~~nF~~L~~~g~---Y~--------------gGd~-~~~g~~~~~~~~~~~~ 137 (220)
.|.++++ .|+|+||||++.||+||+||++||+.++ |+ +||+ .+.+.++.+.++..++
T Consensus 24 ~v~~di~i~~~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~~~ 103 (184)
T 3rdd_A 24 TVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFE 103 (184)
T ss_dssp EEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTTTSSSSCCCBTTBSCBC
T ss_pred EEEEEEeECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCcCcccCCCEEEEccCCcEEEeCCCCCCCCCCCcccCCCccc
Confidence 4777776 9999999999999999999999997654 98 8885 4556666667777788
Q ss_pred CCCCCCCCCC-CeEEEeec-CCCCCCceEEEEcCCCCCCCCCccEEEEEecCHHHHHHHHhCCCCCCCCCCCceEEEEEE
Q 047857 138 SQLRTSPKHE-AFMIGTVK-SKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIINVT 215 (220)
Q Consensus 138 ~e~~~~l~h~-~G~v~ma~-~~~~~~sqFfIt~~~~~~Ld~~~tVFG~Vv~Gmdvv~~I~~~~~~~~~~P~~~i~I~~~~ 215 (220)
+|. ..++|. +|+|+||+ +|++++|||||++.++|+||++|+|||+|++|||||++|++.+++ +++|.++|+|.+|+
T Consensus 104 de~-~~l~h~~~G~lsmA~~gp~s~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~-~g~P~~~v~I~~cG 181 (184)
T 3rdd_A 104 DEN-FILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSR-NGKTSKKITIADCG 181 (184)
T ss_dssp CCC-CCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT-TSCCSSCEEEEEEE
T ss_pred Ccc-cccccCCCcEEEEEeCCCCCcccEEEEEeCCchhhCCCceEEEEEecCHHHHHHHHhcCCC-CCCCcCCeEEEeCe
Confidence 876 578887 99999999 899999999999999999999999999999999999999999874 78999999999999
Q ss_pred Eee
Q 047857 216 LKH 218 (220)
Q Consensus 216 i~~ 218 (220)
+++
T Consensus 182 ~l~ 184 (184)
T 3rdd_A 182 QLE 184 (184)
T ss_dssp ECC
T ss_pred EEC
Confidence 985
No 29
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=2e-38 Score=258.29 Aligned_cols=133 Identities=27% Similarity=0.428 Sum_probs=120.8
Q ss_pred EeccceEEEEEcCCCChHHHHHHHHHHhc--C-ccc--------------cCCCC-CCCCCCCcccCCccCCCCCCCCCC
Q 047857 85 NTSKGYIIVELFKDGSPETVDKFIDLCQK--G-YFK--------------AGHSK-DLAAADEWTSRGKIRSQLRTSPKH 146 (220)
Q Consensus 85 ~T~~G~i~ieL~~~~aP~~~~nF~~L~~~--g-~Y~--------------gGd~~-~~g~~~~~~~~~~~~~e~~~~l~h 146 (220)
.|+.|+|+||||++.||+||+||++||++ | ||+ +||+. +.+.++.+.++..+++|. ..++|
T Consensus 23 ~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~de~-~~~~h 101 (185)
T 4fru_A 23 DEDIGRVVIGLFGKTVPKTVDNFVALATGEKGFGYKDSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDEN-FKLKH 101 (185)
T ss_dssp TEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTTSSSSCCCBTTBSCBCCCC-CCSCC
T ss_pred CEecceEEEEEeCCCCcHHHHHHHHHHhcCCCCeEcCCEEEEeeCCCeEEECCCCCCCCCCCccccCCccCccc-cccCc
Confidence 35699999999999999999999999976 5 688 88886 566667777788888886 57888
Q ss_pred C-CeEEEeec-CCCCCCceEEEEcCCCCCCCCCccEEEEEecCHHHHHHHHhCCCCCCCCCCCceEEEEEEEee
Q 047857 147 E-AFMIGTVK-SKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIINVTLKH 218 (220)
Q Consensus 147 ~-~G~v~ma~-~~~~~~sqFfIt~~~~~~Ld~~~tVFG~Vv~Gmdvv~~I~~~~~~~~~~P~~~i~I~~~~i~~ 218 (220)
. +|+|+||+ +|++++|||||++.++||||++|+|||+|++|||||++|++.+++.+++|.++|+|.+|+++.
T Consensus 102 ~~~G~lsma~~gp~t~~SQFfI~~~~~~~Ld~~~~vFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~~g~l~ 175 (185)
T 4fru_A 102 YGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVETTKTDGRDKPLKDVTIADCGKIE 175 (185)
T ss_dssp CSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCEEEEEEEEEE
T ss_pred CCCeEEEEeeCCCCCcceEEEEEeCCCcccCCCccEEEEEeCCHHHHHHHHhCCCCCCCcCCCCEEEEEceEEe
Confidence 7 99999999 899999999999999999999999999999999999999999999999999999999999874
No 30
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=100.00 E-value=2.7e-38 Score=257.36 Aligned_cols=129 Identities=31% Similarity=0.542 Sum_probs=116.3
Q ss_pred eccceEEEEEcCCCChHHHHHHHHHHh--cCc--------cc--------------cCCCC-CCCCCCCcccCCccCCCC
Q 047857 86 TSKGYIIVELFKDGSPETVDKFIDLCQ--KGY--------FK--------------AGHSK-DLAAADEWTSRGKIRSQL 140 (220)
Q Consensus 86 T~~G~i~ieL~~~~aP~~~~nF~~L~~--~g~--------Y~--------------gGd~~-~~g~~~~~~~~~~~~~e~ 140 (220)
|+.|+|+||||++.||+||+||++||+ .|| |+ +||+. +.|.++.+.++..+++|+
T Consensus 31 t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~Y~g~~FhRVi~~f~iQgGd~~~~~G~gg~si~g~~f~dE~ 110 (186)
T 2poy_A 31 TPAGRITMELFADKVPITAENFRALCTGEKGMGQSGKPLCYTGSFFHRIIPQFMIQGGDFTRGDGTGGESIYGSKFRDEN 110 (186)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSSSCCCCTTC-CBCCCC
T ss_pred EecccEEEEEeCCCCcHHHHHHHHHhcccCCccccCccceECCCEEEEEeCCCEEEeCCCCCCCCCCCCccCCCcccCcc
Confidence 459999999999999999999999996 578 98 88985 566666677788888886
Q ss_pred CCCCCCC-CeEEEeec-CCCCCCceEEEEcCCCCCCCCCccEEEEEecCHHHHHHHHhCCCCCCCCCCCceEEEEEEE
Q 047857 141 RTSPKHE-AFMIGTVK-SKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIINVTL 216 (220)
Q Consensus 141 ~~~l~h~-~G~v~ma~-~~~~~~sqFfIt~~~~~~Ld~~~tVFG~Vv~Gmdvv~~I~~~~~~~~~~P~~~i~I~~~~i 216 (220)
..++|. +|+|+||+ +||+++|||||++.++||||++|+|||+|++|||||++|++.++ .+++|.++|+|.+|+.
T Consensus 111 -~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t-~~~~P~~~v~I~~cG~ 186 (186)
T 2poy_A 111 -FVYTHDAPFLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGKVLEGMEVVKSIEKCGS-QNGKPTKSVCITASGV 186 (186)
T ss_dssp -CCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCC-TTSCCSSCEEEEEEEC
T ss_pred -cccccCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCeeEEEEEecCHHHHHHHHhCCC-CCCCCCCCEEEEeCCC
Confidence 589998 89999999 89999999999999999999999999999999999999999998 5689999999999974
No 31
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=100.00 E-value=2.3e-39 Score=260.95 Aligned_cols=133 Identities=26% Similarity=0.424 Sum_probs=97.5
Q ss_pred EEeccceEEEEEcCCCChHHHHHHHHHHh--cCc-cc--------------cCC-CCCCCCCCCcccCCccCCCCCCCCC
Q 047857 84 LNTSKGYIIVELFKDGSPETVDKFIDLCQ--KGY-FK--------------AGH-SKDLAAADEWTSRGKIRSQLRTSPK 145 (220)
Q Consensus 84 ~~T~~G~i~ieL~~~~aP~~~~nF~~L~~--~g~-Y~--------------gGd-~~~~g~~~~~~~~~~~~~e~~~~l~ 145 (220)
..|++|+|+||||++.||+||+||++||+ .|| |+ +|| +.+.|.++.+.++..+++|. ..++
T Consensus 17 ~~T~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE~-~~~~ 95 (172)
T 2c3b_A 17 AETKVGRIVFNLFDKDVPKTAKNFRELCKRPAGEGYRESTFHRIIPNFMIQGGDFTRGNGTGGRSIYGDKFADEN-FSRK 95 (172)
T ss_dssp SCCEEEEEEEEECTTTSHHHHHHHHHHHHSCTTTSSTTCBCCEEETTTEEEECC-----------------------CHH
T ss_pred eecccccEEEEEcCCCCcHHHHHHHHHhccCCCcccCCCEEEEEeCCCEEEeCCcCCCCCCCCcccCCCcccCcc-cccc
Confidence 45899999999999999999999999999 678 88 888 56777777777788888884 5777
Q ss_pred CC-CeEEEeec-CCCCCCceEEEEcCCCCCCCCCccEEEEEec--CHHHHHHHHhCCCCCCC-CCCCceEEEEEEEe
Q 047857 146 HE-AFMIGTVK-SKDSKGFELYITTAPIPDLNDKLIVFGRVVK--GEDVVQEIEEVDTDEHY-QPKSDVGIINVTLK 217 (220)
Q Consensus 146 h~-~G~v~ma~-~~~~~~sqFfIt~~~~~~Ld~~~tVFG~Vv~--Gmdvv~~I~~~~~~~~~-~P~~~i~I~~~~i~ 217 (220)
|. +|+|+||+ +||+++|||||++.++||||++|+|||+|++ |||||++|++.+++.++ +|.++|+|.+|+++
T Consensus 96 h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~~~G~dvv~~I~~~~t~~~~~~P~~~v~I~~cG~l 172 (172)
T 2c3b_A 96 HDKKGILSMANAGPNTNGSQFFITTAVTSWLDGKHVVFGEVADEKSYSVVKEIEALGSSSGSVRSNTRPKIVNCGEL 172 (172)
T ss_dssp HHHTCEEEEC---------CEEEECSCCTTCCSCCEEEEEECSHHHHHHHHHHHTTCCTTSCCCSSSCCEEEEEEEC
T ss_pred cCCCeEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEecCCHHHHHHHHhCCCCCCCccCCCCeEEEeCeeC
Confidence 76 99999999 8999999999999999999999999999999 99999999999998765 99999999999875
No 32
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=100.00 E-value=3.1e-38 Score=258.55 Aligned_cols=132 Identities=27% Similarity=0.384 Sum_probs=119.2
Q ss_pred EeccceEEEEEcCCCChHHHHHHHHHHh--cCc-cc--------------cCCC-CCCCCCCCcccCCccCCCCCCCCCC
Q 047857 85 NTSKGYIIVELFKDGSPETVDKFIDLCQ--KGY-FK--------------AGHS-KDLAAADEWTSRGKIRSQLRTSPKH 146 (220)
Q Consensus 85 ~T~~G~i~ieL~~~~aP~~~~nF~~L~~--~g~-Y~--------------gGd~-~~~g~~~~~~~~~~~~~e~~~~l~h 146 (220)
+|+.|+|+||||++.||+||+||++||+ .+| |+ +||+ .+.+.++.+.++..+++|. ..++|
T Consensus 38 ~t~~G~I~ieL~~~~aP~tv~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE~-~~l~h 116 (193)
T 3k2c_A 38 EESLGRIVMKLEDDIVPKTAKNFRTLCERPKGEGYKGSTFHRIIPGFMVQGGDYTAHNGTGGRSIYGEKFPDEN-FELKH 116 (193)
T ss_dssp TEEEEEEEEEECTTTSHHHHHHHHHHHHSCTTSSSTTCBEEEEETTTEEEECCTTTSSSSCCCCTTSSCBCCCC-CCSCC
T ss_pred CEEeeEEEEEEcCCCChHHHHHHHHHhccccCCcccCCEEEEEeCCCEEEeCCCCCCCCcCCcccCCCcccccc-ccccc
Confidence 4889999999999999999999999999 677 88 8885 4556666677788888884 67888
Q ss_pred C-CeEEEeec-CCCCCCceEEEEcCCCCCCCCCccEEEEEecCHHHHHHHHhCCCCCCCCCC--CceEEEEEEEee
Q 047857 147 E-AFMIGTVK-SKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPK--SDVGIINVTLKH 218 (220)
Q Consensus 147 ~-~G~v~ma~-~~~~~~sqFfIt~~~~~~Ld~~~tVFG~Vv~Gmdvv~~I~~~~~~~~~~P~--~~i~I~~~~i~~ 218 (220)
. +|+|+||+ +|++++|||||++.++|+||++|+|||+|++|||||++|++.+++ +++|. ++|+|.+|++++
T Consensus 117 ~~~G~lsmAn~gp~t~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~-~g~P~~~~~v~I~~cG~l~ 191 (193)
T 3k2c_A 117 TKEGILSMANCGAHTNGSQFFITLGKTQWLDEKHVVFGEVVEGMDVVHKIAKYGSE-SGQVKKGYRIEIRDCGVLG 191 (193)
T ss_dssp CSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT-TCCCCTTCCEEEEEEEECC
T ss_pred CCCcEEEEEeCCCCCCccEEEEECCCCcccCCCccEEEEEeCCHHHHHHHHhcCCC-CCcCccCccEEEEEceEeC
Confidence 6 99999999 899999999999999999999999999999999999999999987 67999 999999999975
No 33
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=5.2e-38 Score=262.59 Aligned_cols=138 Identities=21% Similarity=0.350 Sum_probs=124.8
Q ss_pred CceEEEEec-----cceEEEEEcCCCChHHHHHHHHHHhcC--------ccc--------------cCCCC-CCCCCCCc
Q 047857 79 PGHAVLNTS-----KGYIIVELFKDGSPETVDKFIDLCQKG--------YFK--------------AGHSK-DLAAADEW 130 (220)
Q Consensus 79 ~~~v~~~T~-----~G~i~ieL~~~~aP~~~~nF~~L~~~g--------~Y~--------------gGd~~-~~g~~~~~ 130 (220)
...|.++++ .|+|+||||++.||+||+||++||+++ ||+ +||+. +.|.++.+
T Consensus 59 ~~~V~~disi~~t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~g~~g~~~~Y~gt~FHRVi~~FmiQgGD~~~g~G~Gg~s 138 (229)
T 1z81_A 59 NPVVFMDINLGNNFLGKFKFELFQNIVPKTSENFRQFCTGEYKVNNLPVGYKNTIFHRVIKEFMIQGGDFINHNGSGSLS 138 (229)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCBSSSSBCSSTTEECCEEETTTEEEECCTTTSSSCCCCB
T ss_pred CcEEEEEEeECCeecccEEEEEcCCCCCHHHHHHHHHhhCCCCCcCCCceECCCEEEEEeCCCEEEcCCCcCCCCCCCCc
Confidence 346777755 899999999999999999999999987 688 89985 66677777
Q ss_pred ccCCccCCCCCCCCCCC-CeEEEeec-CCCCCCceEEEEcCCCCCCCCCccEEEEEe--cCHHHHHHHHhCCCCCC-CCC
Q 047857 131 TSRGKIRSQLRTSPKHE-AFMIGTVK-SKDSKGFELYITTAPIPDLNDKLIVFGRVV--KGEDVVQEIEEVDTDEH-YQP 205 (220)
Q Consensus 131 ~~~~~~~~e~~~~l~h~-~G~v~ma~-~~~~~~sqFfIt~~~~~~Ld~~~tVFG~Vv--~Gmdvv~~I~~~~~~~~-~~P 205 (220)
.++..+++|. ..++|. +|+|+||+ +||+++|||||++.++|+||++|+|||+|+ +|||||++|++.+++.+ ++|
T Consensus 139 iyg~~f~dE~-~~l~h~~~G~LsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~eGmdVv~~I~~~~t~~~~~~P 217 (229)
T 1z81_A 139 IYGEKFDDEN-FDIKHDKEGLLSMANSGPNTNGCQFFITTKKCEWLDGKNVVFGRIIDNDSLLLLKKIENVSVTPYIYKP 217 (229)
T ss_dssp TTBSCCCCCC-CCSCCCSTTEEEECCSSSSCCCSCEEEESSCCGGGBTTBCEEEEECSHHHHHHHHHHHHSCBCTTTCCB
T ss_pred cCCCcccccc-cccccCCCcEEEeccCCCCCcccEEEEECCCCcccCCCeeEEEEEEecCcHHHHHHHHhCCCCCCCCCC
Confidence 7788888886 588996 99999999 899999999999999999999999999999 99999999999999887 999
Q ss_pred CCceEEEEEEEe
Q 047857 206 KSDVGIINVTLK 217 (220)
Q Consensus 206 ~~~i~I~~~~i~ 217 (220)
.++|+|.+|+++
T Consensus 218 ~~~V~I~~cG~l 229 (229)
T 1z81_A 218 KIPINVVECGEL 229 (229)
T ss_dssp SSCEEEEEEEEC
T ss_pred CCCeEEEeCeeC
Confidence 999999999975
No 34
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=100.00 E-value=1.1e-37 Score=262.02 Aligned_cols=131 Identities=18% Similarity=0.220 Sum_probs=114.5
Q ss_pred eccceEEEEEcCCCChHHHHHHHHHHhc-----------------C--c-cc--------------cCCC-CCCCCCCCc
Q 047857 86 TSKGYIIVELFKDGSPETVDKFIDLCQK-----------------G--Y-FK--------------AGHS-KDLAAADEW 130 (220)
Q Consensus 86 T~~G~i~ieL~~~~aP~~~~nF~~L~~~-----------------g--~-Y~--------------gGd~-~~~g~~~~~ 130 (220)
|+.|+|+||||++.||+||+||++||++ | | |+ +||+ .++|.++.+
T Consensus 26 t~~G~I~ieL~~d~aP~tv~NF~~L~~g~~~~~~p~~~~~~~~~~G~~~~Y~gt~FHRVi~~FmiQgGd~~~g~G~Gg~s 105 (234)
T 2ose_A 26 EIIGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHINRTYEGCKFHNVLHNNYIVSGDIYNSNGSSAGT 105 (234)
T ss_dssp EEEEEEEEEECGGGCHHHHHHHHHHHHTCCCC---------------CCCSTTCBCCEEETTTEEEECCCC----CCCCC
T ss_pred cccceEEEEEcCCCCcHHHHHHHHHhcCCccccccccccccccccCCceEECCcEEEEEECCCEEEcCCccCCCCCCCcc
Confidence 9999999999999999999999999994 4 7 88 8884 666766666
Q ss_pred ccCCc-----cCCCCCCCCCCC-CeEEEeec-----CCCCCCceEEEEcCC------CCCCCCCccEEEEEecCHHHHHH
Q 047857 131 TSRGK-----IRSQLRTSPKHE-AFMIGTVK-----SKDSKGFELYITTAP------IPDLNDKLIVFGRVVKGEDVVQE 193 (220)
Q Consensus 131 ~~~~~-----~~~e~~~~l~h~-~G~v~ma~-----~~~~~~sqFfIt~~~------~~~Ld~~~tVFG~Vv~Gmdvv~~ 193 (220)
.++.. ++ ...++|. +|+||||+ +|++++|||||++.+ .||||++|+|||+|++|||||++
T Consensus 106 iyg~~~~p~~f~---~~~l~h~~~G~lsMAn~~~~~gpntngSQFFIt~~~~~~~~g~p~LDg~~tVFG~Vv~GmdVv~~ 182 (234)
T 2ose_A 106 VYCDEPIPPVFG---DYFYPHESKGLLSLVPYTDESGNRYYDSTFMITLDDIRPSNVLDELDRDQVVIGQVYGGLDVLDK 182 (234)
T ss_dssp TTTTCCBCCCCC---SCCCCSCSTTEEEECCEECTTSCEEBCSCEEEESSCCCTTSSGGGSCTTSEEEEEEEECHHHHHH
T ss_pred ccCCccCccccc---CcCccCCCCCEEEEecccccCCCCCccceEEEEecCccccCCCcccCCCeeEEEEEeCCHHHHHH
Confidence 66655 44 3578996 99999997 589999999999999 99999999999999999999999
Q ss_pred HHhCCCCCCCCCCCceEEEEEEEeeC
Q 047857 194 IEEVDTDEHYQPKSDVGIINVTLKHA 219 (220)
Q Consensus 194 I~~~~~~~~~~P~~~i~I~~~~i~~d 219 (220)
|++.+++.+++|.++|+|.+|+++++
T Consensus 183 I~~~~t~~~~~P~~~V~I~~~~~l~~ 208 (234)
T 2ose_A 183 INSMIKPYAGRKYPTFSIGKCGAYLD 208 (234)
T ss_dssp HHHHTCCCTTCCCCCEEEEEEEECCC
T ss_pred HHhCCcCCCCCccCCEEEEEEEEecC
Confidence 99999998899999999999999875
No 35
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=100.00 E-value=2.6e-35 Score=262.26 Aligned_cols=138 Identities=28% Similarity=0.454 Sum_probs=125.6
Q ss_pred ceEEEEec-----cceEEEEEcCCCChHHHHHHHHHHhc--------C---ccc--------------cCCCC-CCCCCC
Q 047857 80 GHAVLNTS-----KGYIIVELFKDGSPETVDKFIDLCQK--------G---YFK--------------AGHSK-DLAAAD 128 (220)
Q Consensus 80 ~~v~~~T~-----~G~i~ieL~~~~aP~~~~nF~~L~~~--------g---~Y~--------------gGd~~-~~g~~~ 128 (220)
..|.++|+ .|+|+|+||++.||+||+||+.||++ | ||+ |||++ ++|.++
T Consensus 16 ~~v~~~~~~~~~~~G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd~~~~~g~g~ 95 (370)
T 1ihg_A 16 PRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGG 95 (370)
T ss_dssp CEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETTTEEEECCTTTSSSSCC
T ss_pred CeEEEEEEECCEecccEEEEEcCCCCchHHHHHHHHcCCCcCcCccCCCcceeCCcEeEEEECCcEEECCCCCCCCCCCC
Confidence 34778877 89999999999999999999999997 6 688 99998 677777
Q ss_pred CcccCCccCCCCCCCCCCC-CeEEEeec-CCCCCCceEEEEcCCCCCCCCCccEEEEEecCHHHHHHHHhCCCCCCCCCC
Q 047857 129 EWTSRGKIRSQLRTSPKHE-AFMIGTVK-SKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPK 206 (220)
Q Consensus 129 ~~~~~~~~~~e~~~~l~h~-~G~v~ma~-~~~~~~sqFfIt~~~~~~Ld~~~tVFG~Vv~Gmdvv~~I~~~~~~~~~~P~ 206 (220)
.+.++..+++|+ ..++|. +|+|+||+ +||+++||||||+.++||||++|+|||+|++||+||++|++.+++. ++|.
T Consensus 96 ~~~~~~~~~~e~-~~~~~~~~g~l~ma~~~~~~~~sqffi~~~~~~~ld~~~~vfG~v~~g~~v~~~i~~~~~~~-~~P~ 173 (370)
T 1ihg_A 96 ESIYGEKFEDEN-FHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGVAKILENVEVKG-EKPA 173 (370)
T ss_dssp CBTTBSCBCCCC-CCBCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCEET-TEES
T ss_pred CCCCCCCcCCCc-CCcCCCCCeEEEEeeCCCCCCCceEEEeCCCCcccCCCceEEEEEecCHHHHHHHHcCCCCC-Cccc
Confidence 777888899886 478886 99999999 8999999999999999999999999999999999999999999876 8999
Q ss_pred CceEEEEEEEeeC
Q 047857 207 SDVGIINVTLKHA 219 (220)
Q Consensus 207 ~~i~I~~~~i~~d 219 (220)
++|+|.+|+++.+
T Consensus 174 ~~v~I~~~g~l~~ 186 (370)
T 1ihg_A 174 KLCVIAECGELKE 186 (370)
T ss_dssp SCEEEEEEEEECT
T ss_pred eeEEEEEEEEecc
Confidence 9999999999853
No 36
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=99.97 E-value=6.7e-33 Score=245.30 Aligned_cols=140 Identities=14% Similarity=0.178 Sum_probs=112.6
Q ss_pred hhhcccCCCCceEEEEec--------cceEEEEEcCCCChHHHHHHHHHHhcCccc-------------cCCCCCCCCCC
Q 047857 70 YAVSKKFDLPGHAVLNTS--------KGYIIVELFKDGSPETVDKFIDLCQKGYFK-------------AGHSKDLAAAD 128 (220)
Q Consensus 70 ~~~~~~~~~~~~v~~~T~--------~G~i~ieL~~~~aP~~~~nF~~L~~~g~Y~-------------gGd~~~~g~~~ 128 (220)
+...+.......|.++|+ .|+|+|+||++.||+||+||++||+.|||| +||++++|.+.
T Consensus 161 y~~~P~l~gra~V~m~t~~~~~~~~~~G~I~IeL~~d~AP~Tv~NFl~L~~~GfYdGt~FHRV~gFmIQgGDp~g~G~G~ 240 (369)
T 3rfy_A 161 YRNMPLLKGRASVDMKVKIKDNPNIEDCVFRIVLDGYNAPVTAGNFVDLVERHFYDGMEIQRSDGFVVQTGDPEGPAEGF 240 (369)
T ss_dssp CTTSCEECSEEEEEEEEECCSCSSCSEEEEEEEEETTTCHHHHHHHHHHHHTTTTTTEECEEEEEEEECCCCCCCCCSCC
T ss_pred cccCccCCCCeEEEEEEeccCCCcccceEEEEEEeCCCCcHHHHHHHHHhhcCCcCCCeeeeeCCeeEecCCCCCCCCCc
Confidence 334455556667889887 999999999999999999999999999999 89998765541
Q ss_pred ---------------------CcccCCccCCCC----CCCCCC-CCeEEEeec---CCCCCCceEEEEc-------CCCC
Q 047857 129 ---------------------EWTSRGKIRSQL----RTSPKH-EAFMIGTVK---SKDSKGFELYITT-------APIP 172 (220)
Q Consensus 129 ---------------------~~~~~~~~~~e~----~~~l~h-~~G~v~ma~---~~~~~~sqFfIt~-------~~~~ 172 (220)
...++..+++|. .+.++| .+|+|+||+ +||+++|||||++ .+.+
T Consensus 241 ~~~~~g~~~~iP~E~~~~G~g~piyg~~fedegf~~~~~~L~h~~~G~LsMAns~~gPnSngSQFFItl~d~~L~~~~~~ 320 (369)
T 3rfy_A 241 IDPSTEKTRTVPLEIMVTGEKTPFYGSTLEELGLYKAQVVIPFNAFGTMAMAREEFENDSGSSQVFWLLKESELTPSNSN 320 (369)
T ss_dssp CSCCCCCCCSSSSSSCSSSSCCSCCCSSTGGGTEEEEEEEECCCCCCCCCCSSCCCCCCCSSCCCCCCCEEEEECSCCCS
T ss_pred cCcccCcCcccCccccccCCCCCcCCCccccccccccccccccCCCceEEEeecCCCCCCccceEEEEecccccCCCCCc
Confidence 122333333332 235665 499999998 5999999999999 4689
Q ss_pred CCCCCccEEEEEecCHHHHHHHHhCCCCCCCCCCCceEEEEEEEeeCC
Q 047857 173 DLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIINVTLKHAI 220 (220)
Q Consensus 173 ~Ld~~~tVFG~Vv~Gmdvv~~I~~~~~~~~~~P~~~i~I~~~~i~~d~ 220 (220)
|||++|+|||+|++|||||++|++.+ +|.+++|++|+
T Consensus 321 ~LDgkytVFG~VveGmdVVdkI~~GD-----------~I~sv~I~~g~ 357 (369)
T 3rfy_A 321 ILDGRYAVFGYVTDNEDFLADLKVGD-----------VIESIQVVSGL 357 (369)
T ss_dssp SSCSCEEEEEEEEESTTGGGGCCTTC-----------EEEEEEEEECG
T ss_pred ccCCCeeEEEEEecCHHHHHHHhCCC-----------ceEEEEEecCC
Confidence 99999999999999999999999853 38899998874
No 37
>2nnz_A Hypothetical protein; beta-barrel, structural genomics, ontario centre for structu proteomics, OCSP, unknown function; NMR {Archaeoglobus fulgidus}
Probab=91.12 E-value=0.26 Score=38.02 Aligned_cols=105 Identities=17% Similarity=0.172 Sum_probs=61.0
Q ss_pred ceEEEEeccceEEEEEcCCCChHHHHHHHHHH--hcCccccCCCCCCCCCCCcccCCccCCCCCCCCCCCCeEEEeecCC
Q 047857 80 GHAVLNTSKGYIIVELFKDGSPETVDKFIDLC--QKGYFKAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKSK 157 (220)
Q Consensus 80 ~~v~~~T~~G~i~ieL~~~~aP~~~~nF~~L~--~~g~Y~gGd~~~~g~~~~~~~~~~~~~e~~~~l~h~~G~v~ma~~~ 157 (220)
+.+.+.-....++++|+.+.||+|++.|+++- +....+-|+ .-.+.+......+......-..|-|+.-..
T Consensus 30 ~~I~i~~~~~~~~a~L~D~~aP~Ta~~f~~~LPl~~~~~~~g~------E~y~~lp~~l~~~en~~~~~~~GDI~Yy~p- 102 (153)
T 2nnz_A 30 MRLRIRFESAECEVELYEEWAPETVRAIADALPIKSTANRWGD------EIYFTTQVAVEKEENSKDVVELGDVAYWIP- 102 (153)
T ss_dssp CCEEEEETTEEEEECCCTTSCHHHHHHHHHTCSEEEEEEEETT------EEEECCSCCCCCSSCCBCCCCTTEEEEETT-
T ss_pred eEEEEEECCEEEEEEEcCCCCHHHHHHHHHhCCcEEEHHhhCC------cEEEECCCCCCCCCCCcccCCCCeEEEeCC-
Confidence 44677777788999999999999999999875 111111111 000011111111111222234787776442
Q ss_pred CCCCceEEEEcCCCCCCCC------CccEEEEEecCHHHHHHH
Q 047857 158 DSKGFELYITTAPIPDLND------KLIVFGRVVKGEDVVQEI 194 (220)
Q Consensus 158 ~~~~sqFfIt~~~~~~Ld~------~~tVFG~Vv~Gmdvv~~I 194 (220)
+..+-|.+++.|...+ .-.+||+|.+|++.|.++
T Consensus 103 ---g~~LaIFYg~~p~s~~e~~~as~~~~lG~I~~gle~L~~~ 142 (153)
T 2nnz_A 103 ---GKAICLFFGKTPISDDKIRPASAVNVIGRIVNSMEGLKGV 142 (153)
T ss_dssp ---TTEEEEESSCCTTCTTSCCCCSSEEEEEECCSCCCCGGGC
T ss_pred ---CCEEEEEECCccccccccccccccEEEEEEccCHHHHhhC
Confidence 1237777887754322 247899999998776554
No 38
>1zx8_A Hypothetical protein TM1367; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: 1PE; 1.90A {Thermotoga maritima} SCOP: b.62.1.3 PDB: 2ka0_A
Probab=64.04 E-value=14 Score=27.63 Aligned_cols=103 Identities=17% Similarity=0.158 Sum_probs=56.6
Q ss_pred ceEEEEeccceEEEEEcCCCChHHHHHHHHHHh--cCccccCCCCCCCCCCCcccCCccCCCCCCCCCCCCeEEEeecCC
Q 047857 80 GHAVLNTSKGYIIVELFKDGSPETVDKFIDLCQ--KGYFKAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKSK 157 (220)
Q Consensus 80 ~~v~~~T~~G~i~ieL~~~~aP~~~~nF~~L~~--~g~Y~gGd~~~~g~~~~~~~~~~~~~e~~~~l~h~~G~v~ma~~~ 157 (220)
+.|.+-.....++.+|+.+ |.|++-|.+.-= ....+-|+ .-........+.+.........|-|+.-..
T Consensus 13 ~~~~~~~~~~~v~a~L~Dn--p~Ta~~~~~~LPl~~~~~~~g~------E~y~~~p~~l~~~e~~~~~~~~GDIaYw~p- 83 (136)
T 1zx8_A 13 MRVELLFESGKCVIDLNEE--YEVVKLLKEKIPFESVVNTWGE------EIYFSTPVNVQKMENPREVVEIGDVGYWPP- 83 (136)
T ss_dssp EEEEEECSSCEEEEEEETT--SHHHHHHHHHCSEEEECEESSS------EEEEECSCCCCCCSSEESSBCTTEEEEEGG-
T ss_pred eEEEEeeCCcEEEEEEcCC--HHHHHHHHHHCCcEEEHHHhCC------cEEEECCccCCCCCCCCccCCCCcEEEeCC-
Confidence 3466666777899999755 889999998751 11111110 000001111121111222234677765431
Q ss_pred CCCCceEEEEcCCCCCCCC------CccEEEEEecCHHHHHHH
Q 047857 158 DSKGFELYITTAPIPDLND------KLIVFGRVVKGEDVVQEI 194 (220)
Q Consensus 158 ~~~~sqFfIt~~~~~~Ld~------~~tVFG~Vv~Gmdvv~~I 194 (220)
+.-|-|-+++.|...+ .-.+||+|.+|++.+..+
T Consensus 84 ---gg~LaIFyg~~p~s~~e~~~a~~v~~lGrI~~~l~~l~~v 123 (136)
T 1zx8_A 84 ---GKALCLFFGKTPMSDDKIQPASAVNVIGKIVEGLEDLKKI 123 (136)
T ss_dssp ---GTEEEEESSCCTTCSSSBCCSSCEEEEEEEEECGGGGGGC
T ss_pred ---CCEEEEEeCCCccccCccccCcCcEEEEEEccCHHHHhhC
Confidence 2257777787754433 358999999997776544
No 39
>3kop_A Uncharacterized protein; protein with A cyclophilin-like fold, structural genomics, J center for structural genomics, JCSG; 1.90A {Arthrobacter SP}
Probab=48.64 E-value=17 Score=28.64 Aligned_cols=32 Identities=19% Similarity=0.099 Sum_probs=24.6
Q ss_pred ceEEEEeccc--eEEEEEcCCCChHHHHHHHHHH
Q 047857 80 GHAVLNTSKG--YIIVELFKDGSPETVDKFIDLC 111 (220)
Q Consensus 80 ~~v~~~T~~G--~i~ieL~~~~aP~~~~nF~~L~ 111 (220)
....++-..+ .++.+|..+.||+||+.|.++-
T Consensus 22 r~i~itl~~~g~~~~A~Lldd~APkTcaA~~~~L 55 (188)
T 3kop_A 22 RYINITLEKRGVTCKALLLDDVAPRTSKAVWDAL 55 (188)
T ss_dssp CEEEEEETTTTEEEEEEECTTTSHHHHHHHHHHC
T ss_pred eEEEEEEecCCeEEEEEEccccChHHHHHHHHhC
Confidence 3455555544 3688999999999999999965
No 40
>3aa0_C 21MER peptide from leucine-rich repeat-containing 16A; actin capping protein, barbed END regulation, carmil family conformational change; 1.70A {Mus musculus}
Probab=37.04 E-value=7.3 Score=20.10 Aligned_cols=17 Identities=12% Similarity=0.247 Sum_probs=13.9
Q ss_pred CCCchhhHHhhhhhccC
Q 047857 2 ARMKPQALLIQSKRKKG 18 (220)
Q Consensus 2 ~~~~~~~~~~~~~~~k~ 18 (220)
++.||+++-+||+++.-
T Consensus 6 tklrpkr~kkqqps~~t 22 (26)
T 3aa0_C 6 TKLRPKRNKKQQPTQAX 22 (26)
T ss_pred hhcCcchhhccCCcccc
Confidence 67899999999887653
No 41
>2khf_A PLNJ; anti-microbial, bacteriocin, peptide, two-peptide, antimicrobial protein; NMR {Lactobacillus plantarum} PDB: 2khg_A
Probab=21.15 E-value=26 Score=17.89 Aligned_cols=14 Identities=21% Similarity=0.544 Sum_probs=12.3
Q ss_pred HHHHHHHHhcCccc
Q 047857 104 VDKFIDLCQKGYFK 117 (220)
Q Consensus 104 ~~nF~~L~~~g~Y~ 117 (220)
..||-.-.+.||||
T Consensus 3 wknfwsslrkgfyd 16 (26)
T 2khf_A 3 WKNFWSSLRKGFYD 16 (26)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhhccc
Confidence 46899999999998
No 42
>2k9u_B Filamin-binding LIM protein 1; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=20.52 E-value=53 Score=17.12 Aligned_cols=13 Identities=31% Similarity=0.478 Sum_probs=9.7
Q ss_pred CCCCceEEEEcCC
Q 047857 158 DSKGFELYITTAP 170 (220)
Q Consensus 158 ~~~~sqFfIt~~~ 170 (220)
....|..|||+.+
T Consensus 7 KR~aSSvFITLap 19 (26)
T 2k9u_B 7 KRVASSVFITLAP 19 (26)
T ss_dssp SSCEEEEEEEECC
T ss_pred hheeeeEEEEecC
Confidence 3446789999976
Done!