BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>047859
LNSNSNKAYGSIHTTNFKSFRVLYRYSAKEEDDNDGENCSFDEAVALFNERAYYKCHDCL
ESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRKMNLRSGPFHEF
ENEISAALEFIYRTQIELAACADDICLAMDQSERSYQLLGDYAAGQQLYHLESDHNQIMY
IVFDPQRSYGSDDKSIKVKLPTLNATEEHLMACK

High Scoring Gene Products

Symbol, full name Information P value
AT2G41120 protein from Arabidopsis thaliana 4.3e-61
GSU1664
Uncharacterized protein
protein from Geobacter sulfurreducens PCA 4.2e-08
GSU_1664
conserved hypothetical protein
protein from Geobacter sulfurreducens PCA 4.2e-08

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  047859
        (214 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2063213 - symbol:AT2G41120 "AT2G41120" species...   625  4.3e-61   1
UNIPROTKB|Q74CK9 - symbol:GSU1664 "Uncharacterized protei...   126  4.2e-08   1
TIGR_CMR|GSU_1664 - symbol:GSU_1664 "conserved hypothetic...   126  4.2e-08   1


>TAIR|locus:2063213 [details] [associations]
            symbol:AT2G41120 "AT2G41120" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM] EMBL:CP002685 GenomeReviews:CT485783_GR
            EMBL:AC004261 UniGene:At.48576 UniGene:At.69620 EMBL:BT010759
            EMBL:BT010981 IPI:IPI00531326 PIR:T02107 RefSeq:NP_181645.1
            ProteinModelPortal:O80675 SMR:O80675 IntAct:O80675 STRING:O80675
            EnsemblPlants:AT2G41120.1 GeneID:818711 KEGG:ath:AT2G41120
            TAIR:At2g41120 eggNOG:COG1547 HOGENOM:HOG000006087
            InParanoid:O80675 OMA:GILQCAV PhylomeDB:O80675
            ProtClustDB:CLSN2683660 ArrayExpress:O80675 Genevestigator:O80675
            Gene3D:1.10.3450.10 InterPro:IPR005500 InterPro:IPR023203
            Pfam:PF03745 SUPFAM:SSF140663 Uniprot:O80675
        Length = 261

 Score = 625 (225.1 bits), Expect = 4.3e-61, P = 4.3e-61
 Identities = 128/217 (58%), Positives = 159/217 (73%)

Query:    14 TTNFKSFRVLY------RYS---AKEEDDNDG---ENCSFDEAVALFNERAYYKCHDCLE 61
             +T F S RV +      RY+    ++E+D+D    E  SF+EAV LFN+R YYK HD LE
Sbjct:    41 STKFSSIRVRFSRRSIVRYNDHAGEDEEDSDEDKEEYWSFEEAVTLFNKRDYYKSHDALE 100

Query:    62 SLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRKMNLRSGPFHEFE 121
             +LW  AEEPTRTLIHG+LQCAVGF+HLFN NHKGAMMELGEG+ KLRKMN   GPFHEFE
Sbjct:   101 ALWIQAEEPTRTLIHGILQCAVGFHHLFNNNHKGAMMELGEGVCKLRKMNFEDGPFHEFE 160

Query:   122 NEISAALEFIYRTQIELAACADDICLAMDQSERSYQLLGDYAAGQQLYHLES--DHNQIM 179
              ++SA LEF+Y+TQ+ELAAC++D+CL MDQS+RSYQLLG YAAG+ +Y LE+  D N  M
Sbjct:   161 RDVSAVLEFVYQTQLELAACSEDMCLTMDQSDRSYQLLGGYAAGESIYSLETVLDFNNGM 220

Query:   180 Y----IVFDPQRSYGSDDKSIKVKLPTLNATEEHLMA 212
                  I+F P  S     +  +VKLPTL AT++HL+A
Sbjct:   221 SETTSILFSPLHS---SSEPTRVKLPTLTATDKHLLA 254


>UNIPROTKB|Q74CK9 [details] [associations]
            symbol:GSU1664 "Uncharacterized protein" species:243231
            "Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0008150 "biological_process" evidence=ND] EMBL:AE017180
            GenomeReviews:AE017180_GR Gene3D:1.10.3450.10 InterPro:IPR005500
            InterPro:IPR023203 Pfam:PF03745 SUPFAM:SSF140663 RefSeq:NP_952715.1
            ProteinModelPortal:Q74CK9 GeneID:2685454 KEGG:gsu:GSU1664
            PATRIC:22026179 HOGENOM:HOG000022505 KO:K09763 OMA:QIAVGCY
            ProtClustDB:CLSK2391449 BioCyc:GSUL243231:GH27-1664-MONOMER
            Uniprot:Q74CK9
        Length = 137

 Score = 126 (49.4 bits), Expect = 4.2e-08, P = 4.2e-08
 Identities = 27/68 (39%), Positives = 37/68 (54%)

Query:    43 EAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGE 102
             +A+  FN   +++CH+ LE LW  +E   R    G LQ AV  +H  N N  GAM  L  
Sbjct:    14 QALGEFNRGDWFECHETLEDLWIGSEGEIRDFYQGALQLAVALHHWRNGNLGGAMSLLQG 73

Query:   103 GLGKLRKM 110
             G G LR++
Sbjct:    74 GAGYLRRV 81


>TIGR_CMR|GSU_1664 [details] [associations]
            symbol:GSU_1664 "conserved hypothetical protein"
            species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            EMBL:AE017180 GenomeReviews:AE017180_GR Gene3D:1.10.3450.10
            InterPro:IPR005500 InterPro:IPR023203 Pfam:PF03745 SUPFAM:SSF140663
            RefSeq:NP_952715.1 ProteinModelPortal:Q74CK9 GeneID:2685454
            KEGG:gsu:GSU1664 PATRIC:22026179 HOGENOM:HOG000022505 KO:K09763
            OMA:QIAVGCY ProtClustDB:CLSK2391449
            BioCyc:GSUL243231:GH27-1664-MONOMER Uniprot:Q74CK9
        Length = 137

 Score = 126 (49.4 bits), Expect = 4.2e-08, P = 4.2e-08
 Identities = 27/68 (39%), Positives = 37/68 (54%)

Query:    43 EAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGE 102
             +A+  FN   +++CH+ LE LW  +E   R    G LQ AV  +H  N N  GAM  L  
Sbjct:    14 QALGEFNRGDWFECHETLEDLWIGSEGEIRDFYQGALQLAVALHHWRNGNLGGAMSLLQG 73

Query:   103 GLGKLRKM 110
             G G LR++
Sbjct:    74 GAGYLRRV 81


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.134   0.401    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      214       214   0.00085  112 3  11 22  0.37    33
                                                     31  0.49    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  602 (64 KB)
  Total size of DFA:  191 KB (2109 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.29u 0.13s 18.42t   Elapsed:  00:00:01
  Total cpu time:  18.29u 0.13s 18.42t   Elapsed:  00:00:01
  Start:  Mon May 20 19:24:06 2013   End:  Mon May 20 19:24:07 2013

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