Query 047859
Match_columns 214
No_of_seqs 160 out of 373
Neff 4.1
Searched_HMMs 29240
Date Mon Mar 25 06:14:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047859.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047859hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ijq_A Hypothetical protein; s 100.0 3.6E-34 1.2E-38 237.8 10.0 120 35-160 30-152 (161)
2 2cwy_A Hypothetical protein TT 100.0 4.9E-30 1.7E-34 195.6 8.8 91 38-135 2-92 (94)
3 3ro3_A PINS homolog, G-protein 92.8 0.38 1.3E-05 33.2 6.8 71 40-110 12-82 (164)
4 2v5f_A Prolyl 4-hydroxylase su 91.8 0.33 1.1E-05 34.6 5.5 66 38-105 6-74 (104)
5 3ro3_A PINS homolog, G-protein 91.7 0.63 2.2E-05 32.1 6.8 70 39-108 51-120 (164)
6 2kc7_A BFR218_protein; tetratr 90.7 1.1 3.8E-05 29.8 7.1 62 40-106 3-64 (99)
7 3gw4_A Uncharacterized protein 90.5 1.1 3.7E-05 33.0 7.4 74 37-110 26-99 (203)
8 1hxi_A PEX5, peroxisome target 90.5 1.3 4.5E-05 31.7 7.7 63 38-106 18-80 (121)
9 1elw_A TPR1-domain of HOP; HOP 90.5 1.5 5E-05 28.8 7.4 62 39-106 6-67 (118)
10 3gw4_A Uncharacterized protein 90.0 0.95 3.3E-05 33.3 6.8 71 40-110 110-180 (203)
11 2l6j_A TPR repeat-containing p 89.9 1.7 5.8E-05 28.8 7.5 61 39-105 6-66 (111)
12 2dba_A Smooth muscle cell asso 89.6 2.4 8.1E-05 29.3 8.3 68 36-106 27-94 (148)
13 1na3_A Designed protein CTPR2; 89.6 2.2 7.6E-05 27.2 7.6 62 39-106 11-72 (91)
14 2lni_A Stress-induced-phosphop 89.2 2.3 8E-05 28.6 7.9 65 36-106 15-79 (133)
15 3sz7_A HSC70 cochaperone (SGT) 89.1 1.3 4.5E-05 32.4 6.9 64 37-106 11-74 (164)
16 3upv_A Heat shock protein STI1 89.0 2.1 7E-05 29.7 7.6 61 40-106 7-67 (126)
17 3nf1_A KLC 1, kinesin light ch 88.9 0.93 3.2E-05 35.3 6.2 73 38-110 28-102 (311)
18 2fbn_A 70 kDa peptidylprolyl i 88.6 3 0.0001 31.5 8.9 96 11-106 5-117 (198)
19 3q49_B STIP1 homology and U bo 88.5 2.4 8.1E-05 29.3 7.6 65 36-106 8-72 (137)
20 3qky_A Outer membrane assembly 88.5 2.2 7.5E-05 33.5 8.2 70 34-106 12-81 (261)
21 1elr_A TPR2A-domain of HOP; HO 88.1 2.6 8.9E-05 28.1 7.4 64 40-109 7-70 (131)
22 2kck_A TPR repeat; tetratricop 88.1 2.7 9.3E-05 27.3 7.3 64 37-106 6-69 (112)
23 2xev_A YBGF; tetratricopeptide 87.9 3.2 0.00011 28.3 7.9 64 40-106 5-68 (129)
24 2xcb_A PCRH, regulatory protei 87.8 2.5 8.5E-05 30.4 7.6 64 37-106 18-81 (142)
25 3ro2_A PINS homolog, G-protein 87.7 2.7 9.2E-05 32.5 8.2 69 40-110 8-76 (338)
26 2vyi_A SGTA protein; chaperone 87.7 3.2 0.00011 27.5 7.6 63 38-106 13-75 (131)
27 2vgx_A Chaperone SYCD; alterna 86.7 2.6 8.8E-05 31.2 7.3 64 37-106 21-84 (148)
28 3ma5_A Tetratricopeptide repea 86.6 3.5 0.00012 28.2 7.5 69 36-110 6-74 (100)
29 1elr_A TPR2A-domain of HOP; HO 85.7 3.2 0.00011 27.6 6.8 68 38-105 39-107 (131)
30 3k9i_A BH0479 protein; putativ 84.8 4.5 0.00015 28.0 7.4 64 37-106 27-90 (117)
31 4a1s_A PINS, partner of inscut 84.3 4.1 0.00014 33.5 8.0 71 38-110 49-119 (411)
32 1na0_A Designed protein CTPR3; 84.1 5.7 0.00019 26.0 7.4 61 40-106 12-72 (125)
33 3rkv_A Putative peptidylprolyl 83.5 2.6 8.8E-05 30.8 5.9 69 38-106 12-92 (162)
34 3ulq_A Response regulator aspa 83.2 5.2 0.00018 33.2 8.4 68 43-110 109-176 (383)
35 2fo7_A Synthetic consensus TPR 82.9 7.6 0.00026 25.5 7.7 61 41-107 39-99 (136)
36 2ho1_A Type 4 fimbrial biogene 82.6 2.6 8.9E-05 32.2 5.8 62 39-106 39-100 (252)
37 3ro2_A PINS homolog, G-protein 82.6 3.8 0.00013 31.6 6.8 71 40-110 46-116 (338)
38 3gyz_A Chaperone protein IPGC; 82.5 4.9 0.00017 30.6 7.4 64 37-106 36-99 (151)
39 1a17_A Serine/threonine protei 82.4 6.8 0.00023 27.4 7.6 59 41-105 17-75 (166)
40 2xev_A YBGF; tetratricopeptide 82.4 8.2 0.00028 26.2 7.9 66 38-106 40-105 (129)
41 4gcn_A Protein STI-1; structur 82.4 5.2 0.00018 28.7 7.1 62 42-109 13-74 (127)
42 3urz_A Uncharacterized protein 81.7 4.8 0.00016 31.1 7.1 70 37-106 4-83 (208)
43 2kat_A Uncharacterized protein 81.7 7.4 0.00025 26.5 7.4 68 36-109 18-85 (115)
44 2vyi_A SGTA protein; chaperone 81.3 9.2 0.00031 25.2 7.6 63 38-106 47-109 (131)
45 3sf4_A G-protein-signaling mod 81.3 7.1 0.00024 31.5 8.2 70 39-110 11-80 (406)
46 1na0_A Designed protein CTPR3; 81.3 9 0.00031 25.0 7.6 63 38-106 44-106 (125)
47 4gco_A Protein STI-1; structur 80.8 8 0.00027 27.8 7.7 62 39-106 15-76 (126)
48 3q15_A PSP28, response regulat 80.4 7.4 0.00025 32.4 8.3 71 40-110 104-174 (378)
49 3u4t_A TPR repeat-containing p 80.0 5.2 0.00018 30.7 6.7 61 39-105 5-65 (272)
50 3cv0_A Peroxisome targeting si 80.0 5.8 0.0002 30.9 7.1 65 36-106 20-84 (327)
51 2lni_A Stress-induced-phosphop 79.6 9.8 0.00034 25.4 7.4 64 37-106 50-113 (133)
52 3sf4_A G-protein-signaling mod 79.4 5.6 0.00019 32.1 7.0 71 40-110 50-120 (406)
53 4i17_A Hypothetical protein; T 78.3 8.5 0.00029 29.2 7.4 63 37-105 7-70 (228)
54 3u3w_A Transcriptional activat 77.9 8.3 0.00029 31.1 7.6 67 44-110 122-188 (293)
55 3vtx_A MAMA; tetratricopeptide 77.8 11 0.00037 27.4 7.7 61 39-105 109-169 (184)
56 4eqf_A PEX5-related protein; a 77.1 13 0.00046 30.0 8.7 79 20-106 50-128 (365)
57 1hz4_A MALT regulatory protein 76.9 6.3 0.00021 32.3 6.7 70 41-110 57-126 (373)
58 3as5_A MAMA; tetratricopeptide 76.6 13 0.00046 25.9 7.6 63 39-107 78-140 (186)
59 4i17_A Hypothetical protein; T 76.5 8.2 0.00028 29.3 6.9 69 37-106 76-146 (228)
60 2q7f_A YRRB protein; TPR, prot 75.7 5.3 0.00018 29.9 5.5 60 41-106 61-120 (243)
61 4gcn_A Protein STI-1; structur 75.6 10 0.00035 27.0 6.9 69 37-105 42-111 (127)
62 1a17_A Serine/threonine protei 75.5 15 0.00051 25.6 7.6 64 37-106 47-110 (166)
63 2fo7_A Synthetic consensus TPR 75.5 14 0.00048 24.1 7.1 60 41-106 5-64 (136)
64 3edt_B KLC 2, kinesin light ch 75.4 7.8 0.00027 29.3 6.4 72 39-110 45-118 (283)
65 4a1s_A PINS, partner of inscut 75.2 5.2 0.00018 32.9 5.8 68 39-106 265-332 (411)
66 1elw_A TPR1-domain of HOP; HOP 74.8 11 0.00037 24.4 6.3 63 37-105 38-100 (118)
67 3upv_A Heat shock protein STI1 74.6 17 0.00058 24.9 7.6 65 37-107 38-102 (126)
68 1hh8_A P67PHOX, NCF-2, neutrop 74.6 6.1 0.00021 29.4 5.6 69 38-106 72-150 (213)
69 2dba_A Smooth muscle cell asso 74.5 16 0.00055 24.9 7.4 62 39-106 67-128 (148)
70 3ieg_A DNAJ homolog subfamily 74.4 15 0.00053 28.7 8.1 63 42-106 239-301 (359)
71 3as5_A MAMA; tetratricopeptide 74.0 9.8 0.00033 26.7 6.3 61 40-106 45-105 (186)
72 1hz4_A MALT regulatory protein 72.4 17 0.00059 29.6 8.3 69 41-110 18-86 (373)
73 3n71_A Histone lysine methyltr 72.4 13 0.00044 34.3 8.3 65 44-110 358-426 (490)
74 2yhc_A BAMD, UPF0169 lipoprote 71.5 14 0.00048 28.5 7.2 66 38-106 5-70 (225)
75 3nf1_A KLC 1, kinesin light ch 71.2 12 0.0004 28.9 6.6 71 40-110 114-186 (311)
76 2vq2_A PILW, putative fimbrial 70.9 20 0.00069 26.0 7.6 23 43-65 14-36 (225)
77 3edt_B KLC 2, kinesin light ch 70.5 16 0.00056 27.4 7.2 71 40-110 130-202 (283)
78 3uq3_A Heat shock protein STI1 70.1 20 0.00069 26.7 7.6 63 38-106 140-202 (258)
79 3qwp_A SET and MYND domain-con 69.7 17 0.00059 32.6 8.4 66 44-110 336-404 (429)
80 2vq2_A PILW, putative fimbrial 69.0 22 0.00075 25.9 7.4 58 42-105 118-175 (225)
81 3qww_A SET and MYND domain-con 67.5 17 0.00059 32.9 7.9 67 43-110 346-415 (433)
82 3ulq_A Response regulator aspa 66.7 14 0.00047 30.7 6.6 70 41-110 188-257 (383)
83 1w3b_A UDP-N-acetylglucosamine 66.6 12 0.00043 30.6 6.2 64 42-105 4-95 (388)
84 2q7f_A YRRB protein; TPR, prot 66.1 25 0.00087 26.0 7.4 63 38-106 92-154 (243)
85 2xcb_A PCRH, regulatory protei 66.0 28 0.00096 24.7 7.4 65 37-107 52-116 (142)
86 3ieg_A DNAJ homolog subfamily 65.7 23 0.0008 27.6 7.4 26 41-66 7-32 (359)
87 1p5q_A FKBP52, FK506-binding p 65.7 24 0.00082 29.7 8.0 67 40-106 150-225 (336)
88 3uq3_A Heat shock protein STI1 65.3 22 0.00074 26.5 6.9 69 37-105 38-107 (258)
89 1hh8_A P67PHOX, NCF-2, neutrop 65.3 28 0.00095 25.7 7.5 64 38-107 38-101 (213)
90 2c2l_A CHIP, carboxy terminus 65.0 17 0.0006 29.5 6.8 65 37-107 38-102 (281)
91 3q15_A PSP28, response regulat 63.8 15 0.00052 30.5 6.3 70 41-110 186-255 (378)
92 2vgx_A Chaperone SYCD; alterna 63.5 31 0.001 25.2 7.4 65 37-107 55-119 (148)
93 2y4t_A DNAJ homolog subfamily 63.3 17 0.00057 30.1 6.4 65 36-106 25-89 (450)
94 4h7y_A Dual specificity protei 63.1 15 0.00051 30.4 6.0 29 77-105 94-122 (161)
95 4ga2_A E3 SUMO-protein ligase 62.6 36 0.0012 24.7 7.6 63 38-106 32-94 (150)
96 3hym_B Cell division cycle pro 62.1 47 0.0016 25.7 8.5 67 38-110 160-226 (330)
97 4gco_A Protein STI-1; structur 62.1 35 0.0012 24.3 7.3 64 37-106 47-110 (126)
98 2pl2_A Hypothetical conserved 62.1 37 0.0013 26.1 7.9 63 38-106 6-68 (217)
99 3cv0_A Peroxisome targeting si 61.8 30 0.001 26.7 7.4 57 43-105 212-268 (327)
100 2ifu_A Gamma-SNAP; membrane fu 61.2 24 0.00082 28.7 7.0 60 51-110 129-188 (307)
101 1xnf_A Lipoprotein NLPI; TPR, 60.9 34 0.0012 25.9 7.4 61 40-106 46-106 (275)
102 2fbn_A 70 kDa peptidylprolyl i 60.7 33 0.0011 25.6 7.2 62 39-106 90-151 (198)
103 2hr2_A Hypothetical protein; a 60.3 32 0.0011 27.4 7.5 72 38-109 12-89 (159)
104 2kck_A TPR repeat; tetratricop 60.1 28 0.00094 22.2 5.9 64 38-105 41-105 (112)
105 3urz_A Uncharacterized protein 60.0 35 0.0012 26.0 7.4 58 43-106 60-117 (208)
106 3qky_A Outer membrane assembly 59.7 36 0.0012 26.4 7.5 68 38-106 90-177 (261)
107 2ifu_A Gamma-SNAP; membrane fu 59.7 18 0.00061 29.6 5.9 62 43-104 161-222 (307)
108 2gw1_A Mitochondrial precursor 59.4 30 0.001 28.9 7.4 60 39-105 8-67 (514)
109 2ho1_A Type 4 fimbrial biogene 59.2 37 0.0013 25.5 7.3 25 41-65 109-133 (252)
110 3rkv_A Putative peptidylprolyl 58.9 37 0.0013 24.4 7.0 62 39-106 65-126 (162)
111 2qfc_A PLCR protein; TPR, HTH, 58.3 53 0.0018 26.2 8.5 66 45-110 123-188 (293)
112 1qqe_A Vesicular transport pro 57.4 24 0.00083 28.5 6.3 65 42-106 163-228 (292)
113 3vtx_A MAMA; tetratricopeptide 57.3 46 0.0016 24.0 7.3 59 41-105 9-67 (184)
114 2qfc_A PLCR protein; TPR, HTH, 56.5 51 0.0018 26.3 8.1 68 40-107 78-145 (293)
115 1fch_A Peroxisomal targeting s 56.2 47 0.0016 26.4 7.8 64 37-106 64-127 (368)
116 4eqf_A PEX5-related protein; a 55.6 34 0.0012 27.6 6.9 26 42-67 218-243 (365)
117 2r5s_A Uncharacterized protein 54.9 39 0.0013 24.7 6.7 65 38-107 109-174 (176)
118 1kt0_A FKBP51, 51 kDa FK506-bi 54.6 41 0.0014 29.6 7.8 67 40-106 271-346 (457)
119 3hym_B Cell division cycle pro 53.9 53 0.0018 25.4 7.5 64 36-105 21-84 (330)
120 3fp2_A TPR repeat-containing p 53.4 39 0.0013 28.6 7.1 62 39-106 27-88 (537)
121 1hxi_A PEX5, peroxisome target 52.2 24 0.00084 24.8 5.0 63 37-105 51-113 (121)
122 3sz7_A HSC70 cochaperone (SGT) 52.0 63 0.0021 23.2 10.8 65 37-107 45-109 (164)
123 3gyz_A Chaperone protein IPGC; 51.3 61 0.0021 24.3 7.4 64 37-106 70-133 (151)
124 2if4_A ATFKBP42; FKBP-like, al 50.8 18 0.00062 30.5 4.7 67 40-106 182-259 (338)
125 1xnf_A Lipoprotein NLPI; TPR, 50.0 59 0.002 24.5 7.1 63 38-106 78-140 (275)
126 3u3w_A Transcriptional activat 48.8 83 0.0028 25.1 8.2 65 43-107 81-145 (293)
127 3u4t_A TPR repeat-containing p 48.2 64 0.0022 24.4 7.1 67 37-106 37-103 (272)
128 3n71_A Histone lysine methyltr 48.2 1E+02 0.0034 28.3 9.6 66 43-110 315-384 (490)
129 2e2e_A Formate-dependent nitri 47.8 75 0.0026 22.8 7.5 59 41-105 82-143 (177)
130 1ihg_A Cyclophilin 40; ppiase 47.6 33 0.0011 29.7 5.9 67 40-106 226-302 (370)
131 4b4t_Q 26S proteasome regulato 47.6 44 0.0015 27.6 6.5 71 40-110 178-249 (434)
132 2r5s_A Uncharacterized protein 47.5 13 0.00045 27.4 2.9 61 38-104 7-67 (176)
133 1fch_A Peroxisomal targeting s 47.3 50 0.0017 26.3 6.6 28 79-106 219-246 (368)
134 3bee_A Putative YFRE protein; 47.1 35 0.0012 23.9 5.1 46 53-104 25-70 (93)
135 2e2e_A Formate-dependent nitri 46.8 63 0.0022 23.2 6.6 65 37-106 44-110 (177)
136 4b4t_Q 26S proteasome regulato 45.1 65 0.0022 26.6 7.1 70 41-110 139-208 (434)
137 2y4t_A DNAJ homolog subfamily 44.8 80 0.0027 26.0 7.6 61 44-106 264-324 (450)
138 3fp2_A TPR repeat-containing p 43.9 95 0.0032 26.2 8.1 68 37-110 344-411 (537)
139 2vsy_A XCC0866; transferase, g 43.8 70 0.0024 28.3 7.6 60 41-106 61-120 (568)
140 4abn_A Tetratricopeptide repea 43.4 52 0.0018 29.0 6.7 64 36-105 101-165 (474)
141 2hr2_A Hypothetical protein; a 43.0 98 0.0033 24.6 7.7 88 39-135 59-153 (159)
142 2c2l_A CHIP, carboxy terminus 42.9 91 0.0031 25.1 7.6 62 38-105 5-66 (281)
143 3qou_A Protein YBBN; thioredox 42.8 27 0.00094 28.3 4.4 62 37-104 117-178 (287)
144 2yhc_A BAMD, UPF0169 lipoprote 42.8 1E+02 0.0035 23.5 7.5 61 41-104 151-211 (225)
145 1qqe_A Vesicular transport pro 42.8 50 0.0017 26.6 6.0 64 44-107 124-188 (292)
146 2gw1_A Mitochondrial precursor 41.5 19 0.00064 30.2 3.3 61 40-106 341-401 (514)
147 2vsy_A XCC0866; transferase, g 39.6 90 0.0031 27.6 7.6 65 37-107 91-158 (568)
148 1pc2_A Mitochondria fission pr 38.9 73 0.0025 25.4 6.3 66 35-105 30-99 (152)
149 3iqc_A FLIS, flagellar protein 38.7 1.1E+02 0.0037 23.6 7.1 37 74-110 32-69 (131)
150 1p5q_A FKBP52, FK506-binding p 37.9 1E+02 0.0035 25.7 7.4 62 39-106 198-259 (336)
151 2if4_A ATFKBP42; FKBP-like, al 37.9 54 0.0018 27.5 5.6 59 41-105 234-292 (338)
152 3qww_A SET and MYND domain-con 35.7 1.9E+02 0.0066 26.0 9.3 64 45-110 306-373 (433)
153 4g1t_A Interferon-induced prot 35.7 44 0.0015 27.9 4.7 65 42-106 99-167 (472)
154 2pzi_A Probable serine/threoni 35.5 89 0.0031 29.1 7.2 65 36-106 432-496 (681)
155 3q49_B STIP1 homology and U bo 34.8 1E+02 0.0035 20.7 10.5 87 37-135 43-129 (137)
156 2xpi_A Anaphase-promoting comp 34.0 1.3E+02 0.0044 25.9 7.5 60 41-106 520-579 (597)
157 3mkr_A Coatomer subunit epsilo 32.9 1.8E+02 0.0063 23.5 8.0 26 41-66 134-159 (291)
158 1ihg_A Cyclophilin 40; ppiase 32.7 1.6E+02 0.0053 25.3 7.9 60 41-106 277-336 (370)
159 3bee_A Putative YFRE protein; 32.0 1.3E+02 0.0044 20.9 7.1 42 36-77 42-84 (93)
160 1ouv_A Conserved hypothetical 31.7 1.6E+02 0.0056 22.5 7.2 59 39-105 8-70 (273)
161 1w3b_A UDP-N-acetylglucosamine 31.6 1.6E+02 0.0055 23.8 7.4 60 41-106 241-300 (388)
162 2kat_A Uncharacterized protein 31.6 1.1E+02 0.0039 20.2 6.0 45 56-106 4-48 (115)
163 3qou_A Protein YBBN; thioredox 31.1 1.5E+02 0.005 23.9 7.0 28 41-68 189-216 (287)
164 1wao_1 Serine/threonine protei 30.9 47 0.0016 29.6 4.3 63 38-106 41-103 (477)
165 3t5x_A PCI domain-containing p 30.7 43 0.0015 27.4 3.7 70 40-109 17-111 (203)
166 2ftc_B Mitochondrial ribosomal 28.7 36 0.0012 27.0 2.9 45 158-202 58-105 (136)
167 2pl2_A Hypothetical conserved 28.0 2E+02 0.0067 21.8 7.0 62 38-106 119-180 (217)
168 1na3_A Designed protein CTPR2; 27.4 1.1E+02 0.0038 18.8 5.0 27 80-106 12-38 (91)
169 2ff4_A Probable regulatory pro 27.1 1.9E+02 0.0066 25.2 7.6 23 87-109 215-237 (388)
170 2xpi_A Anaphase-promoting comp 26.7 1.1E+02 0.0037 26.4 5.8 19 87-105 526-544 (597)
171 4b4t_P 26S proteasome regulato 26.3 1.8E+02 0.0062 26.1 7.4 68 42-110 142-210 (445)
172 1vh6_A Flagellar protein FLIS; 26.2 1.2E+02 0.004 23.9 5.4 62 74-135 29-91 (145)
173 1kt0_A FKBP51, 51 kDa FK506-bi 26.1 1.5E+02 0.005 26.1 6.6 60 41-106 321-380 (457)
174 3ma5_A Tetratricopeptide repea 25.3 1.2E+02 0.0042 20.1 4.8 26 81-106 11-36 (100)
175 3qwp_A SET and MYND domain-con 24.9 3.6E+02 0.012 23.9 10.1 66 43-110 293-362 (429)
176 3mkr_A Coatomer subunit epsilo 24.1 1.7E+02 0.0058 23.8 6.2 59 37-106 101-159 (291)
177 1wao_1 Serine/threonine protei 24.0 2.3E+02 0.0079 25.1 7.6 30 39-68 76-105 (477)
178 2kc7_A BFR218_protein; tetratr 23.9 1.2E+02 0.0041 19.4 4.4 35 39-73 37-71 (99)
179 2wpv_A GET4, UPF0363 protein Y 23.6 1.4E+02 0.005 26.2 6.1 26 38-63 14-39 (312)
180 2ond_A Cleavage stimulation fa 23.3 2.9E+02 0.0098 22.1 7.7 50 50-105 182-231 (308)
181 4abn_A Tetratricopeptide repea 23.1 1.4E+02 0.0047 26.2 5.8 63 37-106 137-208 (474)
182 1giy_D 50S ribosomal protein L 23.0 53 0.0018 27.3 3.0 45 158-202 71-118 (178)
183 1orj_A Flagellar protein FLIS; 22.1 1.3E+02 0.0044 23.3 4.9 38 74-111 25-67 (130)
184 4f3v_A ESX-1 secretion system 22.1 54 0.0019 28.4 3.0 77 13-103 78-161 (282)
185 3k9i_A BH0479 protein; putativ 22.1 1.8E+02 0.0063 19.4 6.4 54 50-106 3-56 (117)
186 3txn_A 26S proteasome regulato 21.8 2.3E+02 0.0079 25.6 7.2 67 42-108 144-212 (394)
187 3fap_B FRAP, FKBP12-rapamycin 21.2 1.6E+02 0.0055 21.8 5.0 46 88-133 21-69 (94)
188 1rl2_A Protein (ribosomal prot 20.7 37 0.0013 27.0 1.5 45 158-202 71-118 (137)
No 1
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=100.00 E-value=3.6e-34 Score=237.78 Aligned_cols=120 Identities=16% Similarity=0.265 Sum_probs=110.3
Q ss_pred CCcchhHHHHHHHhccCCchhhhhhhHHhhccCCcc--hhhHHHHHHH-HHHHHHHHhcCCHHHHHHHHHHHHHHHhhcc
Q 047859 35 DGENCSFDEAVALFNERAYYKCHDCLESLWYTAEEP--TRTLIHGVLQ-CAVGFYHLFNQNHKGAMMELGEGLGKLRKMN 111 (214)
Q Consensus 35 ~e~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~--er~~lqGLIQ-lAvAl~H~~rGN~~GA~~Ll~rAl~~L~~~~ 111 (214)
.+..++|.+|+.|||+|+||||||+||++|+..+++ +|.||||||| +|||+||+++||++||++|+++|+.+|+.++
T Consensus 30 ~~~~~~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~L~~~~ 109 (161)
T 2ijq_A 30 ETLRRAVVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQYFRGVP 109 (161)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTSC
T ss_pred CCccHHHHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCC
Confidence 457789999999999999999999999999999876 9999999999 9999999999999999999999999999984
Q ss_pred CCCCCCcccccCHHHHHHHHHHhhHHHHhcccCceeeecCcchhHHhhh
Q 047859 112 LRSGPFHEFENEISAALEFIYRTQIELAACADDICLAMDQSERSYQLLG 160 (214)
Q Consensus 112 ~~~~p~~~~GvDV~aLl~~i~~l~~Elaa~~~d~~l~~dgs~~~~~~Lg 160 (214)
..++|||+..|+.++.++..+...+ ++|||++||+++++++|+
T Consensus 110 -----~~~~GIDv~~L~~~~~~~l~dp~~~-~~P~l~~dg~~~~~~~~~ 152 (161)
T 2ijq_A 110 -----NDYYGVDLLDVRTTVTNALSDPSAL-HGWQIRLDGEYPTCRPED 152 (161)
T ss_dssp -----TTGGGBCHHHHHHHHHHHHHCGGGG-TTCCCCBTTBCCCCCHHH
T ss_pred -----CccCCcCHHHHHHHHHHHhhCCccC-CCCeEEecCCCCCCccCC
Confidence 3579999999999999988654444 499999999999999997
No 2
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=99.96 E-value=4.9e-30 Score=195.59 Aligned_cols=91 Identities=20% Similarity=0.320 Sum_probs=84.9
Q ss_pred chhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhccCCCCCC
Q 047859 38 NCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRKMNLRSGPF 117 (214)
Q Consensus 38 ~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L~~~~~~~~p~ 117 (214)
++.|..|+.+||+|+||||||+||++|+..++++|.+||||||+|||+||+++||+ |++++++|+.+|+.+| .
T Consensus 2 ~~~~~~~~~lfn~g~~~eaHEvlE~~W~~~~~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~~L~~~~-----~ 74 (94)
T 2cwy_A 2 VPDWEEVLGLWRAGRYYEVHEVLEPYWLKATGEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEARLEGLP-----C 74 (94)
T ss_dssp CCCHHHHHHHHHTTCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHHTTCC-----S
T ss_pred CHHHHHHHHHHhCCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHHHHHhCC-----C
Confidence 46799999999999999999999999999999999999999999999999999999 9999999999999984 3
Q ss_pred cccccCHHHHHHHHHHhh
Q 047859 118 HEFENEISAALEFIYRTQ 135 (214)
Q Consensus 118 ~~~GvDV~aLl~~i~~l~ 135 (214)
.++|||+..|++++.++.
T Consensus 75 ~~~gidv~~L~~~~~~~l 92 (94)
T 2cwy_A 75 PLMGLDWRSLLQEARRRL 92 (94)
T ss_dssp SBTTBCHHHHHHHHHHHH
T ss_pred ccCCcCHHHHHHHHHHHh
Confidence 479999999999997653
No 3
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=92.82 E-value=0.38 Score=33.20 Aligned_cols=71 Identities=11% Similarity=-0.037 Sum_probs=54.6
Q ss_pred hHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhc
Q 047859 40 SFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRKM 110 (214)
Q Consensus 40 ~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L~~~ 110 (214)
-+.-|..++..|+|=+|-+.++..-...+........+.+....|..+...|++..|...+.+++......
T Consensus 12 ~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~ 82 (164)
T 3ro3_A 12 FGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQL 82 (164)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 34567778889999999999988777655333334556666777888888999999999999999887654
No 4
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=91.79 E-value=0.33 Score=34.59 Aligned_cols=66 Identities=14% Similarity=0.096 Sum_probs=47.9
Q ss_pred chhHHHHHHHhccCCchhhhhhhHHhhccCCcc---hhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 047859 38 NCSFDEAVALFNERAYYKCHDCLESLWYTAEEP---TRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLG 105 (214)
Q Consensus 38 ~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~---er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~ 105 (214)
..-|.-|..+|+.++|-.|...++.+-+..+.+ .-....-+.++|.+ +.+.|+...|..++++|+.
T Consensus 6 ~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~--~~~~g~~~~A~~~~~~al~ 74 (104)
T 2v5f_A 6 EDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYA--VYQQGDLDKALLLTKKLLE 74 (104)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHH--HHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHH--HHHccCHHHHHHHHHHHHh
Confidence 446888999999999999999999986654211 11122333455554 4578899999999999985
No 5
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=91.71 E-value=0.63 Score=32.06 Aligned_cols=70 Identities=9% Similarity=-0.048 Sum_probs=42.7
Q ss_pred hhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHh
Q 047859 39 CSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLR 108 (214)
Q Consensus 39 ~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L~ 108 (214)
.-..-|..++..|+|=+|-+.++......+........+.+....|..+...|++..|...+.+++....
T Consensus 51 ~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~ 120 (164)
T 3ro3_A 51 AYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQ 120 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 4566666777777777777777665554443223334455555556666667777777777777766543
No 6
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=90.74 E-value=1.1 Score=29.78 Aligned_cols=62 Identities=11% Similarity=0.027 Sum_probs=48.1
Q ss_pred hHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 40 SFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 40 ~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
.+..|..++..|+|-+|-+.++.+-...+.... ..+..+ |..+...|++..|...+++++..
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~---~~~~~l--g~~~~~~~~~~~A~~~~~~al~~ 64 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKD---EAYYLM--GNAYRKLGDWQKALNNYQSAIEL 64 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHH---HHHHHH--HHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHH---HHHHHH--HHHHHHcCCHHHHHHHHHHHHhc
Confidence 578899999999999999999999887664322 133333 44456789999999999999864
No 7
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=90.55 E-value=1.1 Score=33.02 Aligned_cols=74 Identities=12% Similarity=0.035 Sum_probs=58.1
Q ss_pred cchhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhc
Q 047859 37 ENCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRKM 110 (214)
Q Consensus 37 ~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L~~~ 110 (214)
...-...|..++..|+|-+|-+.++...............+.+....|..+...|++..|...+.+|+......
T Consensus 26 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 99 (203)
T 3gw4_A 26 SGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASL 99 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc
Confidence 34456677888889999999999998877555333344566667777888889999999999999999988765
No 8
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=90.50 E-value=1.3 Score=31.74 Aligned_cols=63 Identities=11% Similarity=0.128 Sum_probs=49.5
Q ss_pred chhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 38 NCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 38 ~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
...+..|..++..|+|-+|-+.++.+-...|... .++ ...|..+...|++..|...+++|+..
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~----~a~--~~lg~~~~~~g~~~~A~~~~~~al~l 80 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPERE----EAW--RSLGLTQAENEKDGLAIIALNHARML 80 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH----HHH--HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCH----HHH--HHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 4578999999999999999999999888766432 222 23344566889999999999999864
No 9
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=90.47 E-value=1.5 Score=28.80 Aligned_cols=62 Identities=3% Similarity=-0.170 Sum_probs=47.0
Q ss_pred hhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 39 CSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 39 ~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
.-+..|..++..|+|-+|-+.++......+... .. ....|..+...|++..|...+.+++..
T Consensus 6 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~----~~--~~~~a~~~~~~~~~~~A~~~~~~~~~~ 67 (118)
T 1elw_A 6 ELKEKGNKALSVGNIDDALQCYSEAIKLDPHNH----VL--YSNRSAAYAKKGDYQKAYEDGCKTVDL 67 (118)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH----HH--HHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcH----HH--HHHHHHHHHhhccHHHHHHHHHHHHHh
Confidence 346678889999999999999999988766432 12 223344566789999999999999864
No 10
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=90.02 E-value=0.95 Score=33.30 Aligned_cols=71 Identities=8% Similarity=-0.009 Sum_probs=54.4
Q ss_pred hHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhc
Q 047859 40 SFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRKM 110 (214)
Q Consensus 40 ~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L~~~ 110 (214)
.+.-|..++..|+|=+|-+.++......+........+.+....|..+...|++..|...+++|+......
T Consensus 110 ~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 180 (203)
T 3gw4_A 110 AYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAEL 180 (203)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHc
Confidence 34557777788999999999998876554333334455555667788889999999999999999988776
No 11
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=89.90 E-value=1.7 Score=28.80 Aligned_cols=61 Identities=15% Similarity=0.156 Sum_probs=48.1
Q ss_pred hhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 047859 39 CSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLG 105 (214)
Q Consensus 39 ~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~ 105 (214)
.-+..|..++..|+|-+|-+.++.+-...+... .+....|..+...|++..|...+++++.
T Consensus 6 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~------~~~~~lg~~~~~~g~~~~A~~~~~~al~ 66 (111)
T 2l6j_A 6 KQKEQGNSLFKQGLYREAVHCYDQLITAQPQNP------VGYSNKAMALIKLGEYTQAIQMCQQGLR 66 (111)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCH------HHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCH------HHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 346789999999999999999999888766432 2233445667788999999999999985
No 12
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.63 E-value=2.4 Score=29.31 Aligned_cols=68 Identities=15% Similarity=0.014 Sum_probs=51.7
Q ss_pred CcchhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 36 GENCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 36 e~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
+...-+..|..++..|+|=+|-+.++.+....+.+ ......+.. .|..+...|++..|...+.+++..
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~-~~~~~~~~~--~a~~~~~~~~~~~A~~~~~~~~~~ 94 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGLDATP-QDQAVLHRN--RAACHLKLEDYDKAETEASKAIEK 94 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCH-HHHHHHHHH--HHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccc-hHHHHHHHH--HHHHHHHHccHHHHHHHHHHHHhh
Confidence 45667888999999999999999999998876532 112333333 444567789999999999999864
No 13
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=89.56 E-value=2.2 Score=27.23 Aligned_cols=62 Identities=8% Similarity=0.034 Sum_probs=47.5
Q ss_pred hhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 39 CSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 39 ~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
.-+..|..++..|+|-+|-+.++..-...+... . +....|..+...|++..|...+++++..
T Consensus 11 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~----~--~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 72 (91)
T 1na3_A 11 AWYNLGNAYYKQGDYDEAIEYYQKALELDPNNA----E--AWYNLGNAYYKQGDYDEAIEYYQKALEL 72 (91)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH----H--HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCH----H--HHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 345678888999999999999999887765432 2 2234455667899999999999999864
No 14
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=89.23 E-value=2.3 Score=28.64 Aligned_cols=65 Identities=8% Similarity=-0.084 Sum_probs=50.0
Q ss_pred CcchhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 36 GENCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 36 e~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
....-+..|..++..|+|=+|-+.++.+....+... -+....|..+...|++..|...+.+++..
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~------~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 79 (133)
T 2lni_A 15 LALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDA------KLYSNRAACYTKLLEFQLALKDCEECIQL 79 (133)
T ss_dssp HHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCH------HHHHHHHHHHTTTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcH------HHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 456667888999999999999999999888765431 22233455568889999999999999864
No 15
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=89.13 E-value=1.3 Score=32.44 Aligned_cols=64 Identities=13% Similarity=-0.042 Sum_probs=45.7
Q ss_pred cchhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 37 ENCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 37 ~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
...-+..|..+|..|+|-+|-+.++.+....+... . +....|..+...|++..|...+++|+..
T Consensus 11 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~----~--~~~~l~~~~~~~g~~~~A~~~~~~al~~ 74 (164)
T 3sz7_A 11 SDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANP----I--YLSNRAAAYSASGQHEKAAEDAELATVV 74 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH----H--HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCH----H--HHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 34567778888889999999999988887765431 1 2233345566778888888888888754
No 16
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=89.04 E-value=2.1 Score=29.73 Aligned_cols=61 Identities=11% Similarity=0.062 Sum_probs=44.7
Q ss_pred hHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 40 SFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 40 ~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
-+..|..+|..|+|=+|-+.++.+-...+... .. ....|..+...|++..|...+.+++..
T Consensus 7 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~----~~--~~~~a~~~~~~~~~~~A~~~~~~al~~ 67 (126)
T 3upv_A 7 ARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDA----RG--YSNRAAALAKLMSFPEAIADCNKAIEK 67 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH----HH--HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCh----HH--HHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 45678889999999999999998887765431 22 233344556788999999999988754
No 17
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=88.86 E-value=0.93 Score=35.30 Aligned_cols=73 Identities=10% Similarity=-0.039 Sum_probs=53.9
Q ss_pred chhHHHHHHHhccCCchhhhhhhHHhhccCCc--chhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhc
Q 047859 38 NCSFDEAVALFNERAYYKCHDCLESLWYTAEE--PTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRKM 110 (214)
Q Consensus 38 ~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g--~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L~~~ 110 (214)
..-+..|..++..|+|=+|-+.++.+...... .......+.+....|..+...|++..|...+.+++......
T Consensus 28 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 102 (311)
T 3nf1_A 28 RTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKT 102 (311)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 34456688888999999999999998775331 11233445555566677788999999999999999876543
No 18
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=88.63 E-value=3 Score=31.45 Aligned_cols=96 Identities=11% Similarity=-0.057 Sum_probs=53.4
Q ss_pred ccccccccceeeeeeecccCCCCCCCc-------chhHHHHHHHhccCCchhhhhhhHHhhccCCcch----------hh
Q 047859 11 SIHTTNFKSFRVLYRYSAKEEDDNDGE-------NCSFDEAVALFNERAYYKCHDCLESLWYTAEEPT----------RT 73 (214)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~e~-------~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~e----------r~ 73 (214)
++|++....+.+--+|....+..+... ..-+..|..+|..|+|-+|-+.++.+-...+... ..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 84 (198)
T 2fbn_A 5 HHHHHHSSGRENLYFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKK 84 (198)
T ss_dssp -----------------CCCSGGGCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHH
T ss_pred ccccchhhhhhhhhhccccCchhhCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHH
Confidence 344444444444445544444333332 2345678889999999999999999887655221 11
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 74 LIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 74 ~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
-+...+..-.|..+...|++..|...+.+++..
T Consensus 85 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 117 (198)
T 2fbn_A 85 NIEISCNLNLATCYNKNKDYPKAIDHASKVLKI 117 (198)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 122234445566677899999999999999865
No 19
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=88.49 E-value=2.4 Score=29.31 Aligned_cols=65 Identities=15% Similarity=0.102 Sum_probs=48.8
Q ss_pred CcchhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 36 GENCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 36 e~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
....-+..|..+|..|+|-+|-+.++.+....+... -+....|..+...|++..|...+.+++..
T Consensus 8 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~------~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 72 (137)
T 3q49_B 8 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVA------VYYTNRALCYLKMQQPEQALADCRRALEL 72 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH------HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcH------HHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 345567889999999999999999998887765431 12333455667789999999999988864
No 20
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=88.46 E-value=2.2 Score=33.52 Aligned_cols=70 Identities=11% Similarity=0.100 Sum_probs=54.0
Q ss_pred CCCcchhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 34 NDGENCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 34 ~~e~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
..+....+..|..+|..|+|-+|-+.++.+-...|... +..-+..-.|..+...|++..|...+.+++..
T Consensus 12 ~~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~---~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~ 81 (261)
T 3qky_A 12 HSSPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHE---WAADAQFYLARAYYQNKEYLLAASEYERFIQI 81 (261)
T ss_dssp CSSHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCST---THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCc---chHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 33567789999999999999999999999998877432 11223334455667889999999999999864
No 21
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=88.14 E-value=2.6 Score=28.09 Aligned_cols=64 Identities=2% Similarity=-0.109 Sum_probs=49.8
Q ss_pred hHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhh
Q 047859 40 SFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRK 109 (214)
Q Consensus 40 ~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L~~ 109 (214)
-+..|..++..|+|-+|-+.++.+....+... .+....|..+...|++..|...+.+++..-..
T Consensus 7 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~------~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 70 (131)
T 1elr_A 7 EKELGNDAYKKKDFDTALKHYDKAKELDPTNM------TYITNQAAVYFEKGDYNKCRELCEKAIEVGRE 70 (131)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH------HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCccH------HHHHHHHHHHHHhccHHHHHHHHHHHHhhccc
Confidence 35678888999999999999999988765431 23344566677899999999999999876543
No 22
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=88.09 E-value=2.7 Score=27.28 Aligned_cols=64 Identities=13% Similarity=-0.006 Sum_probs=48.8
Q ss_pred cchhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 37 ENCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 37 ~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
...-+..|..++..|+|=+|-+.++.+....+.... . ....|..+...|++..|...+.+++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~----~--~~~~a~~~~~~~~~~~A~~~~~~a~~~ 69 (112)
T 2kck_A 6 PEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESK----Y--WLMKGKALYNLERYEEAVDCYNYVINV 69 (112)
T ss_dssp TTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHH----H--HHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHH----H--HHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 344567888999999999999999998887664322 2 234455667889999999999999854
No 23
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=87.85 E-value=3.2 Score=28.33 Aligned_cols=64 Identities=9% Similarity=0.057 Sum_probs=44.8
Q ss_pred hHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 40 SFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 40 ~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
.+..|..++..|+|=+|-+.++.+....+.... .-..+ .-.|..+...|++..|...+.+++..
T Consensus 5 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~-~~~~~--~~lg~~~~~~~~~~~A~~~~~~~~~~ 68 (129)
T 2xev_A 5 AYNVAFDALKNGKYDDASQLFLSFLELYPNGVY-TPNAL--YWLGESYYATRNFQLAEAQFRDLVSR 68 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTT-HHHHH--HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcc-cHHHH--HHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 577888888899999999999888877663321 01222 23344566788899999888888754
No 24
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=87.81 E-value=2.5 Score=30.43 Aligned_cols=64 Identities=6% Similarity=-0.000 Sum_probs=49.4
Q ss_pred cchhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 37 ENCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 37 ~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
....+..|..++..|+|-+|-+.++.+-...|... ..| ...|..+...|++..|...+++|+..
T Consensus 18 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~-~~~-----~~lg~~~~~~g~~~~A~~~~~~al~~ 81 (142)
T 2xcb_A 18 LEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDA-RYF-----LGLGACRQSLGLYEQALQSYSYGALM 81 (142)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH-HHH-----HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccH-HHH-----HHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 45567889999999999999999999888766432 222 23355567889999999999999864
No 25
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=87.73 E-value=2.7 Score=32.47 Aligned_cols=69 Identities=12% Similarity=-0.005 Sum_probs=49.2
Q ss_pred hHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhc
Q 047859 40 SFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRKM 110 (214)
Q Consensus 40 ~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L~~~ 110 (214)
-+..|..++..|+|=+|-+.++.+-...+++. ...+.+....|..+...|++..|...+.+++......
T Consensus 8 l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 76 (338)
T 3ro2_A 8 LALEGERLCKSGDCRAGVSFFEAAVQVGTEDL--KTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTI 76 (338)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCH--HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhhCcccH--HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcc
Confidence 46678888888888888888888877655432 3334444455666777888888888888888765543
No 26
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=87.72 E-value=3.2 Score=27.55 Aligned_cols=63 Identities=10% Similarity=-0.047 Sum_probs=47.5
Q ss_pred chhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 38 NCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 38 ~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
..-+..|..++..|+|=+|-+.++.+....+.. ..+....|..+...|++..|...+.+++..
T Consensus 13 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 75 (131)
T 2vyi_A 13 ERLKTEGNEQMKVENFEAAVHFYGKAIELNPAN------AVYFCNRAAAYSKLGNYAGAVQDCERAICI 75 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCC------HHHHHHHHHHHHHhhchHHHHHHHHHHHhc
Confidence 445667888899999999999999988766533 123334455667889999999999999864
No 27
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=86.69 E-value=2.6 Score=31.24 Aligned_cols=64 Identities=13% Similarity=0.107 Sum_probs=49.6
Q ss_pred cchhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 37 ENCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 37 ~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
...-+..|..++..|+|-+|-+.++.+....|.... .| ...|..+...|++..|...+++|+..
T Consensus 21 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~-~~-----~~lg~~~~~~g~~~~A~~~~~~al~l 84 (148)
T 2vgx_A 21 LEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSR-FF-----LGLGACRQAMGQYDLAIHSYSYGAVM 84 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-HH-----HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHH-HH-----HHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 445677899999999999999999998887664322 22 23355667889999999999999864
No 28
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=86.58 E-value=3.5 Score=28.22 Aligned_cols=69 Identities=12% Similarity=0.039 Sum_probs=52.6
Q ss_pred CcchhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhc
Q 047859 36 GENCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRKM 110 (214)
Q Consensus 36 e~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L~~~ 110 (214)
+...-+..|..++..|+|=+|-+.++.+-...|.... ++.. .|......|++..|...+++|+..-...
T Consensus 6 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~----a~~~--lg~~~~~~g~~~~A~~~~~~al~l~~~~ 74 (100)
T 3ma5_A 6 DPFTRYALAQEHLKHDNASRALALFEELVETDPDYVG----TYYH--LGKLYERLDRTDDAIDTYAQGIEVAREE 74 (100)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTH----HHHH--HHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH----HHHH--HHHHHHHcCCHHHHHHHHHHHHhhhhcC
Confidence 3455678899999999999999999999887764322 2333 3445677899999999999999765443
No 29
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=85.75 E-value=3.2 Score=27.61 Aligned_cols=68 Identities=16% Similarity=0.161 Sum_probs=49.5
Q ss_pred chhHHHHHHHhccCCchhhhhhhHHhhccCCc-chhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 047859 38 NCSFDEAVALFNERAYYKCHDCLESLWYTAEE-PTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLG 105 (214)
Q Consensus 38 ~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g-~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~ 105 (214)
..-+.-|..++..|+|=+|-+.++......+. +.......-+....|..+...|++..|...+.+++.
T Consensus 39 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 107 (131)
T 1elr_A 39 TYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLA 107 (131)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 34456788888899999999999998877652 222222233444556667788999999999999986
No 30
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=84.82 E-value=4.5 Score=28.03 Aligned_cols=64 Identities=8% Similarity=-0.081 Sum_probs=49.0
Q ss_pred cchhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 37 ENCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 37 ~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
...-+.-|..++..|+|=+|-+.++.+-...|.. ...+ ...|..+...|++..|...+.+++..
T Consensus 27 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~----~~~~--~~l~~~~~~~g~~~~A~~~~~~al~~ 90 (117)
T 3k9i_A 27 AECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNH----QALR--VFYAMVLYNLGRYEQGVELLLKIIAE 90 (117)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC----HHHH--HHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc----hHHH--HHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 3445677888999999999999999988776644 2222 33455667789999999999999864
No 31
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=84.28 E-value=4.1 Score=33.55 Aligned_cols=71 Identities=14% Similarity=0.014 Sum_probs=54.7
Q ss_pred chhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhc
Q 047859 38 NCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRKM 110 (214)
Q Consensus 38 ~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L~~~ 110 (214)
..-+..|..++..|+|=+|-+.++.+-...+++.. ..+.+....|..+...|++..|...+.+|+......
T Consensus 49 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~--~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 119 (411)
T 4a1s_A 49 LELALEGERLCNAGDCRAGVAFFQAAIQAGTEDLR--TLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSM 119 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHH--HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccChh--HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc
Confidence 44567888999999999999999999887654333 344445555667778899999999999999876543
No 32
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=84.15 E-value=5.7 Score=26.02 Aligned_cols=61 Identities=8% Similarity=0.031 Sum_probs=45.1
Q ss_pred hHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 40 SFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 40 ~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
-+..|..++..|+|=+|-+.++.+....+.... +....|..+...|++..|...+++++..
T Consensus 12 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~------~~~~la~~~~~~~~~~~A~~~~~~~~~~ 72 (125)
T 1na0_A 12 WYNLGNAYYKQGDYDEAIEYYQKALELDPNNAE------AWYNLGNAYYKQGDYDEAIEYYQKALEL 72 (125)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH------HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHH------HHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 455677788899999999999998876553321 2233455567789999999999998764
No 33
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=83.47 E-value=2.6 Score=30.76 Aligned_cols=69 Identities=13% Similarity=0.020 Sum_probs=49.2
Q ss_pred chhHHHHHHHhccCCchhhhhhhHHhhccC--------Ccchh----hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 047859 38 NCSFDEAVALFNERAYYKCHDCLESLWYTA--------EEPTR----TLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLG 105 (214)
Q Consensus 38 ~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~--------~g~er----~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~ 105 (214)
..-...|..+|..|+|-+|-+.++.+.... +.+.. .-....+..-.|..+...|++..|...+.+|+.
T Consensus 12 ~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~ 91 (162)
T 3rkv_A 12 EALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVLK 91 (162)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHh
Confidence 344678999999999999999998877652 11110 222233445556667888999999999999986
Q ss_pred H
Q 047859 106 K 106 (214)
Q Consensus 106 ~ 106 (214)
.
T Consensus 92 ~ 92 (162)
T 3rkv_A 92 R 92 (162)
T ss_dssp H
T ss_pred c
Confidence 4
No 34
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=83.22 E-value=5.2 Score=33.23 Aligned_cols=68 Identities=4% Similarity=-0.054 Sum_probs=54.8
Q ss_pred HHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhc
Q 047859 43 EAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRKM 110 (214)
Q Consensus 43 ~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L~~~ 110 (214)
.|..++..|+|=+|-+.++.+-............+.+..-.|..+...|++..|...+.+|+......
T Consensus 109 ~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~ 176 (383)
T 3ulq_A 109 RGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEH 176 (383)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC
Confidence 78889999999999999999876554323344566666777788888999999999999999887765
No 35
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=82.95 E-value=7.6 Score=25.47 Aligned_cols=61 Identities=8% Similarity=0.032 Sum_probs=37.3
Q ss_pred HHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 047859 41 FDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKL 107 (214)
Q Consensus 41 l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L 107 (214)
+..|..++..|+|-+|-+.++..-...+.... +....|..+...|++..|...+.+++..-
T Consensus 39 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~------~~~~l~~~~~~~~~~~~A~~~~~~~~~~~ 99 (136)
T 2fo7_A 39 YNLGNAYYKQGDYDEAIEYYQKALELDPRSAE------AWYNLGNAYYKQGDYDEAIEYYQKALELD 99 (136)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHH------HHHHHHHHHHTTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHCCCchH------HHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 44566666777777777777776655443211 12233445567777777777777776544
No 36
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=82.64 E-value=2.6 Score=32.16 Aligned_cols=62 Identities=10% Similarity=-0.000 Sum_probs=44.5
Q ss_pred hhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 39 CSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 39 ~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
.-+..|..++..|+|-+|-+.++.+-...+... . +....|......|++..|...+.+++..
T Consensus 39 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~----~--~~~~la~~~~~~~~~~~A~~~~~~a~~~ 100 (252)
T 2ho1_A 39 AYIQLGLGYLQRGNTEQAKVPLRKALEIDPSSA----D--AHAALAVVFQTEMEPKLADEEYRKALAS 100 (252)
T ss_dssp HHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTCH----H--HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHhcCCChH----H--HHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 346677888889999999999999877655331 1 2233344556788889998888888754
No 37
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=82.56 E-value=3.8 Score=31.61 Aligned_cols=71 Identities=15% Similarity=-0.003 Sum_probs=53.0
Q ss_pred hHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhc
Q 047859 40 SFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRKM 110 (214)
Q Consensus 40 ~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L~~~ 110 (214)
-+..|..++..|+|=+|-+.++..-............+.+....|..+...|++..|...+.+++......
T Consensus 46 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 116 (338)
T 3ro2_A 46 YSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL 116 (338)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh
Confidence 34667888889999999999988665443222233445555666777889999999999999999887665
No 38
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=82.53 E-value=4.9 Score=30.61 Aligned_cols=64 Identities=9% Similarity=0.011 Sum_probs=50.3
Q ss_pred cchhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 37 ENCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 37 ~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
.+.-+..|..+|..|+|=+|-+.++.+-...|... ..|.+ .|......|++..|...+++|+..
T Consensus 36 ~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~-~~~~~-----lg~~~~~~g~~~~Ai~~~~~al~l 99 (151)
T 3gyz_A 36 MDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNV-DYIMG-----LAAIYQIKEQFQQAADLYAVAFAL 99 (151)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH-HHHHH-----HHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-HHHHH-----HHHHHHHHccHHHHHHHHHHHHhh
Confidence 45567889999999999999999999988776432 23333 355567889999999999999864
No 39
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=82.40 E-value=6.8 Score=27.45 Aligned_cols=59 Identities=8% Similarity=-0.034 Sum_probs=29.0
Q ss_pred HHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 047859 41 FDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLG 105 (214)
Q Consensus 41 l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~ 105 (214)
+..|..++..|+|=+|-+.++.+....+... . +....|..+...|++..|...+.+++.
T Consensus 17 ~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~----~--~~~~~a~~~~~~~~~~~A~~~~~~a~~ 75 (166)
T 1a17_A 17 KTQANDYFKAKDYENAIKFYSQAIELNPSNA----I--YYGNRSLAYLRTECYGYALGDATRAIE 75 (166)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH----H--HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCCCCh----H--HHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3445555556666666666665555443221 1 112223334445556666666655554
No 40
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=82.39 E-value=8.2 Score=26.16 Aligned_cols=66 Identities=12% Similarity=0.132 Sum_probs=49.3
Q ss_pred chhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 38 NCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 38 ~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
...+..|..++..|+|=+|-+.++.+-...+.... ....+.. .|..+...|++..|...+++++..
T Consensus 40 ~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~-~~~~~~~--la~~~~~~g~~~~A~~~~~~~~~~ 105 (129)
T 2xev_A 40 NALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDK-AAGGLLK--LGLSQYGEGKNTEAQQTLQQVATQ 105 (129)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTT-HHHHHHH--HHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcc-cHHHHHH--HHHHHHHcCCHHHHHHHHHHHHHH
Confidence 45678899999999999999999998887664321 1223333 344566889999999999998864
No 41
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=82.36 E-value=5.2 Score=28.67 Aligned_cols=62 Identities=8% Similarity=-0.025 Sum_probs=47.5
Q ss_pred HHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhh
Q 047859 42 DEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRK 109 (214)
Q Consensus 42 ~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L~~ 109 (214)
.-|..+|..|+|=+|-+.++.+..-.|... ..+ .-.|..+...|++..|...+.+|+..-..
T Consensus 13 ~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~----~~~--~nlg~~~~~~~~~~~A~~~~~~al~~~~~ 74 (127)
T 4gcn_A 13 DLGNAAYKQKDFEKAHVHYDKAIELDPSNI----TFY--NNKAAVYFEEKKFAECVQFCEKAVEVGRE 74 (127)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCH----HHH--HHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCH----HHH--HhHHHHHHHhhhHHHHHHHHHHHHHhCcc
Confidence 458899999999999999999887766431 222 23355667889999999999999976443
No 42
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=81.74 E-value=4.8 Score=31.06 Aligned_cols=70 Identities=13% Similarity=-0.003 Sum_probs=49.2
Q ss_pred cchhHHHHHHHhccCCchhhhhhhHHhhccCCcchhh-HHHH---------HHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 37 ENCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRT-LIHG---------VLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 37 ~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~-~lqG---------LIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
.+..+..|..++..|+|=+|-+.++.+-...|..... ++.+ -+....|..+...|++..|...+++++..
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 83 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQK 83 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 3457889999999999999999999988776532221 1200 00011455667889999999999988854
No 43
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=81.65 E-value=7.4 Score=26.51 Aligned_cols=68 Identities=10% Similarity=-0.030 Sum_probs=51.4
Q ss_pred CcchhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhh
Q 047859 36 GENCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRK 109 (214)
Q Consensus 36 e~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L~~ 109 (214)
+...-+.-|..++..|+|=+|-+.++.+-...+... ..+ ...|..+...|++..|...+++++..-..
T Consensus 18 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~----~~~--~~la~~~~~~g~~~~A~~~~~~al~~~~~ 85 (115)
T 2kat_A 18 NMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYS----VAW--KWLGKTLQGQGDRAGARQAWESGLAAAQS 85 (115)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH----HHH--HHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcH----HHH--HHHHHHHHHcCCHHHHHHHHHHHHHhccc
Confidence 345567788899999999999999999888766432 222 33355667789999999999999876543
No 44
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=81.34 E-value=9.2 Score=25.19 Aligned_cols=63 Identities=13% Similarity=-0.053 Sum_probs=47.8
Q ss_pred chhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 38 NCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 38 ~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
..-+..|..++..|+|=+|-+.++.+-...+... .+....|..+...|++..|...+.+++..
T Consensus 47 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 109 (131)
T 2vyi_A 47 VYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYS------KAYGRMGLALSSLNKHVEAVAYYKKALEL 109 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH------HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCH------HHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 4455677888889999999999999877655331 23344556677899999999999999864
No 45
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=81.32 E-value=7.1 Score=31.51 Aligned_cols=70 Identities=13% Similarity=0.019 Sum_probs=51.0
Q ss_pred hhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhc
Q 047859 39 CSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRKM 110 (214)
Q Consensus 39 ~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L~~~ 110 (214)
.-+..|..++..|+|=+|-+.++.+-...+.+... .+.+....|..+...|++..|...+.+|+......
T Consensus 11 ~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~--~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 80 (406)
T 3sf4_A 11 ELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKT--LSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTI 80 (406)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHH--HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhcCcccHHH--HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc
Confidence 34678889999999999999999888775544332 33334444556677889999999999888776543
No 46
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=81.29 E-value=9 Score=25.00 Aligned_cols=63 Identities=8% Similarity=0.038 Sum_probs=46.9
Q ss_pred chhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 38 NCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 38 ~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
..-+.-|..++..|+|=+|-+.++..-...+... . +....|..+...|++..|...+.+++..
T Consensus 44 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~----~--~~~~la~~~~~~~~~~~A~~~~~~~~~~ 106 (125)
T 1na0_A 44 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNA----E--AWYNLGNAYYKQGDYDEAIEYYQKALEL 106 (125)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH----H--HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccH----H--HHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 3445677888889999999999999887655332 1 2234455667889999999999998754
No 47
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=80.81 E-value=8 Score=27.78 Aligned_cols=62 Identities=6% Similarity=-0.101 Sum_probs=46.3
Q ss_pred hhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 39 CSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 39 ~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
.....|..+|..|+|=+|-+.++.+=...|... ..+. -.|..+...|++..|...+.+|+..
T Consensus 15 ~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~----~~~~--~~~~~~~~~~~~~~A~~~~~~al~~ 76 (126)
T 4gco_A 15 EEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENA----ILYS--NRAACLTKLMEFQRALDDCDTCIRL 76 (126)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH----HHHH--HHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH----HHHH--HHhhHHHhhccHHHHHHHHHHHHHh
Confidence 345679999999999999999998766655332 2222 2355567789999999999999853
No 48
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=80.37 E-value=7.4 Score=32.44 Aligned_cols=71 Identities=8% Similarity=0.035 Sum_probs=55.6
Q ss_pred hHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhc
Q 047859 40 SFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRKM 110 (214)
Q Consensus 40 ~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L~~~ 110 (214)
.+..|..++..|+|=+|-+.++..-............+.+..-.|..+...|++..|...+.+|+......
T Consensus 104 ~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~ 174 (378)
T 3q15_A 104 LFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNH 174 (378)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhC
Confidence 45578888999999999999998766544222335566666677778888999999999999999887765
No 49
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=80.04 E-value=5.2 Score=30.72 Aligned_cols=61 Identities=11% Similarity=-0.007 Sum_probs=38.7
Q ss_pred hhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 047859 39 CSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLG 105 (214)
Q Consensus 39 ~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~ 105 (214)
.-+..|..+|..|+|=+|-+.++.+....+.... .+..+ |..+...|++..|...+.+++.
T Consensus 5 ~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~----~~~~l--~~~~~~~~~~~~A~~~~~~a~~ 65 (272)
T 3u4t_A 5 VEFRYADFLFKNNNYAEAIEVFNKLEAKKYNSPY----IYNRR--AVCYYELAKYDLAQKDIETYFS 65 (272)
T ss_dssp CHHHHHHHHHTTTCHHHHHHHHHHHHHTTCCCST----THHHH--HHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHH----HHHHH--HHHHHHHhhHHHHHHHHHHHHh
Confidence 3566777777777777777777777766553221 12222 2245567777777777777765
No 50
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=80.03 E-value=5.8 Score=30.92 Aligned_cols=65 Identities=12% Similarity=0.121 Sum_probs=45.7
Q ss_pred CcchhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 36 GENCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 36 e~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
+...-+..|..+++.|+|-+|-+.++.+-...+.... .+ ...|..+...|++..|...+.+++..
T Consensus 20 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~----~~--~~l~~~~~~~~~~~~A~~~~~~a~~~ 84 (327)
T 3cv0_A 20 YHENPMEEGLSMLKLANLAEAALAFEAVCQAAPEREE----AW--RSLGLTQAENEKDGLAIIALNHARML 84 (327)
T ss_dssp GSSCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH----HH--HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHH----HH--HHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 3445688899999999999999999988776553221 12 22344566778888888888887754
No 51
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=79.55 E-value=9.8 Score=25.42 Aligned_cols=64 Identities=11% Similarity=-0.097 Sum_probs=47.7
Q ss_pred cchhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 37 ENCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 37 ~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
...-+..|..++..|+|=+|-+.++.+....+.. ...+. ..|..+...|++..|...+.+++..
T Consensus 50 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~----~~~~~--~la~~~~~~~~~~~A~~~~~~~~~~ 113 (133)
T 2lni_A 50 AKLYSNRAACYTKLLEFQLALKDCEECIQLEPTF----IKGYT--RKAAALEAMKDYTKAMDVYQKALDL 113 (133)
T ss_dssp HHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTC----HHHHH--HHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCc----hHHHH--HHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 3445667888888999999999999988875532 22233 3344567889999999999999864
No 52
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=79.41 E-value=5.6 Score=32.10 Aligned_cols=71 Identities=15% Similarity=-0.003 Sum_probs=53.6
Q ss_pred hHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhc
Q 047859 40 SFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRKM 110 (214)
Q Consensus 40 ~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L~~~ 110 (214)
-+.-|..++..|+|=+|-+.++.+.............+.+....|..+...|++..|...+.+|+......
T Consensus 50 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 120 (406)
T 3sf4_A 50 YSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL 120 (406)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc
Confidence 44667888889999999999998765544222234445556666777889999999999999999887665
No 53
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=78.29 E-value=8.5 Score=29.22 Aligned_cols=63 Identities=11% Similarity=0.021 Sum_probs=43.0
Q ss_pred cchhHHHHHHHhccCCchhhhhhhHHhhccCC-cchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 047859 37 ENCSFDEAVALFNERAYYKCHDCLESLWYTAE-EPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLG 105 (214)
Q Consensus 37 ~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~-g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~ 105 (214)
...-+..|..+|+.|+|=+|-+.++.+....+ .+. ..+ .-.|..+...|++..|...+.+|+.
T Consensus 7 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~-~~~-----~~~~~~~~~~~~~~~A~~~~~~al~ 70 (228)
T 4i17_A 7 PNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDS-VTA-----YNCGVCADNIKKYKEAADYFDIAIK 70 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCH-HHH-----HHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCc-HHH-----HHHHHHHHHhhcHHHHHHHHHHHHH
Confidence 35567788888888888888888888877665 222 111 1135556667788888888777764
No 54
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=77.86 E-value=8.3 Score=31.06 Aligned_cols=67 Identities=15% Similarity=0.055 Sum_probs=49.4
Q ss_pred HHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhc
Q 047859 44 AVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRKM 110 (214)
Q Consensus 44 gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L~~~ 110 (214)
|..+++.++|-+|-+.++.++.........+....+....|..+...|++..|...+.+|+..+...
T Consensus 122 ~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~ 188 (293)
T 3u3w_A 122 AAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEAL 188 (293)
T ss_dssp HHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc
Confidence 4444557788888888888887544322233445556677888889999999999999999887765
No 55
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=77.76 E-value=11 Score=27.45 Aligned_cols=61 Identities=10% Similarity=-0.044 Sum_probs=33.9
Q ss_pred hhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 047859 39 CSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLG 105 (214)
Q Consensus 39 ~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~ 105 (214)
.-+..|..++..|+|=+|-+.++..-...|.... +....|..+...|+...|...+++|++
T Consensus 109 ~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~------~~~~lg~~~~~~g~~~~A~~~~~~al~ 169 (184)
T 3vtx_A 109 AYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIR------AYQSIGLAYEGKGLRDEAVKYFKKALE 169 (184)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH------HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhh------HHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 3445566666666666666666665555442211 112234445566667777777776654
No 56
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=77.10 E-value=13 Score=30.04 Aligned_cols=79 Identities=14% Similarity=0.074 Sum_probs=53.2
Q ss_pred eeeeeeecccCCCCCCCcchhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHH
Q 047859 20 FRVLYRYSAKEEDDNDGENCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMME 99 (214)
Q Consensus 20 ~~~~~~~~~~~~~~~~e~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~L 99 (214)
....|.+....+. .+...-+..|..++..|+|=+|-+.++.+-...+... -+....|..+...|++..|...
T Consensus 50 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~------~~~~~lg~~~~~~g~~~~A~~~ 121 (365)
T 4eqf_A 50 SEKGYYFHTENPF--KDWPGAFEEGLKRLKEGDLPVTILFMEAAILQDPGDA------EAWQFLGITQAENENEQAAIVA 121 (365)
T ss_dssp ---CCCCCSSCTT--TTCTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH------HHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHhhhcccCCcc--cchhHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcCCH------HHHHHHHHHHHHCCCHHHHHHH
Confidence 3444555444433 2455688999999999999999999999877665331 1223345556677888888888
Q ss_pred HHHHHHH
Q 047859 100 LGEGLGK 106 (214)
Q Consensus 100 l~rAl~~ 106 (214)
+++++..
T Consensus 122 ~~~al~~ 128 (365)
T 4eqf_A 122 LQRCLEL 128 (365)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 8888754
No 57
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=76.87 E-value=6.3 Score=32.32 Aligned_cols=70 Identities=4% Similarity=-0.201 Sum_probs=53.4
Q ss_pred HHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhc
Q 047859 41 FDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRKM 110 (214)
Q Consensus 41 l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L~~~ 110 (214)
...|..++..|+|=+|-+.++..-...+...............|..+...|++..|...+++++......
T Consensus 57 ~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~ 126 (373)
T 1hz4_A 57 SVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQ 126 (373)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHh
Confidence 3456677779999999999988777655333344556666777888899999999999999999877654
No 58
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=76.65 E-value=13 Score=25.93 Aligned_cols=63 Identities=10% Similarity=-0.070 Sum_probs=38.7
Q ss_pred hhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 047859 39 CSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKL 107 (214)
Q Consensus 39 ~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L 107 (214)
.-+..|..++..|+|=+|-+.++.+....+... .+....|......|++..|...+.+++..-
T Consensus 78 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~------~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 140 (186)
T 3as5_A 78 VATVLGLTYVQVQKYDLAVPLLIKVAEANPINF------NVRFRLGVALDNLGRFDEAIDSFKIALGLR 140 (186)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhH------HHHHHHHHHHHHcCcHHHHHHHHHHHHhcC
Confidence 344556667777777777777777766544321 122333444556777777777777776554
No 59
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=76.46 E-value=8.2 Score=29.29 Aligned_cols=69 Identities=10% Similarity=-0.056 Sum_probs=50.3
Q ss_pred cchhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHH--HHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 37 ENCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHG--VLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 37 ~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqG--LIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
...-+..|..++..|+|-+|-+.++.+-...|... .++.. -+....|..+...|++..|...+++|+..
T Consensus 76 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~-~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 146 (228)
T 4i17_A 76 ANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNA-TIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDV 146 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH-HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcH-HHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhc
Confidence 34456678888889999999999999888766432 12222 23455667778889999999999998753
No 60
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=75.74 E-value=5.3 Score=29.88 Aligned_cols=60 Identities=10% Similarity=-0.023 Sum_probs=33.1
Q ss_pred HHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 41 FDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 41 l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
+..|..++..|+|-+|=+.++.+-...+.. ..+....|......|++..|...+.+++..
T Consensus 61 ~~la~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 120 (243)
T 2q7f_A 61 INFANLLSSVNELERALAFYDKALELDSSA------ATAYYGAGNVYVVKEMYKEAKDMFEKALRA 120 (243)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHcCCcc------hHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 334555566666666666666655543321 112223344455667777777777776653
No 61
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=75.61 E-value=10 Score=27.04 Aligned_cols=69 Identities=13% Similarity=0.080 Sum_probs=49.4
Q ss_pred cchhHHHHHHHhccCCchhhhhhhHHhhccCCc-chhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 047859 37 ENCSFDEAVALFNERAYYKCHDCLESLWYTAEE-PTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLG 105 (214)
Q Consensus 37 ~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g-~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~ 105 (214)
...-..-|..++..|+|-+|-+.++..=.-.+. .......+-+..-.|..+...|++..|...+.+|+.
T Consensus 42 ~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~ 111 (127)
T 4gcn_A 42 ITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLS 111 (127)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 344456788999999999999988876554442 222233344445556677889999999999999975
No 62
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=75.52 E-value=15 Score=25.64 Aligned_cols=64 Identities=6% Similarity=-0.051 Sum_probs=48.0
Q ss_pred cchhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 37 ENCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 37 ~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
...-+..|..++..|+|=+|-+.++.+-...+... ..+ ...|..+...|++..|...+.+++..
T Consensus 47 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~----~~~--~~~a~~~~~~~~~~~A~~~~~~a~~~ 110 (166)
T 1a17_A 47 AIYYGNRSLAYLRTECYGYALGDATRAIELDKKYI----KGY--YRRAASNMALGKFRAALRDYETVVKV 110 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH----HHH--HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccH----HHH--HHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 34456677888889999999999999887765332 223 33455677889999999999999864
No 63
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=75.50 E-value=14 Score=24.10 Aligned_cols=60 Identities=8% Similarity=0.052 Sum_probs=43.5
Q ss_pred HHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 41 FDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 41 l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
+..|..++..|+|=+|-+.++..-...+... .. ....|..+...|++..|...+.+++..
T Consensus 5 ~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~-~~-----~~~~a~~~~~~~~~~~A~~~~~~~~~~ 64 (136)
T 2fo7_A 5 YNLGNAYYKQGDYDEAIEYYQKALELDPRSA-EA-----WYNLGNAYYKQGDYDEAIEYYQKALEL 64 (136)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH-HH-----HHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCcHHHHHHHHHHHHHcCCcch-hH-----HHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 4457778889999999999998766544322 12 223355567789999999999998754
No 64
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=75.35 E-value=7.8 Score=29.27 Aligned_cols=72 Identities=11% Similarity=-0.075 Sum_probs=51.5
Q ss_pred hhHHHHHHHhccCCchhhhhhhHHhhccCCcc--hhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhc
Q 047859 39 CSFDEAVALFNERAYYKCHDCLESLWYTAEEP--TRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRKM 110 (214)
Q Consensus 39 ~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~--er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L~~~ 110 (214)
.-+.-|..++..|+|=+|-+.++.+-...... ......+.+....|......|++..|...+.+|+......
T Consensus 45 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 118 (283)
T 3edt_B 45 MLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKV 118 (283)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 34567888888999999999998876543210 1123344455555667788999999999999999887554
No 65
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=75.23 E-value=5.2 Score=32.88 Aligned_cols=68 Identities=7% Similarity=-0.064 Sum_probs=37.8
Q ss_pred hhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 39 CSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 39 ~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
.-+.-|..++..|+|=+|-+.++..-...+..........+....|..+...|++..|...+++++..
T Consensus 265 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 332 (411)
T 4a1s_A 265 ANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAI 332 (411)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 34555666666666666666666555444422223333444444455556666666666666666554
No 66
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=74.81 E-value=11 Score=24.41 Aligned_cols=63 Identities=14% Similarity=-0.019 Sum_probs=46.7
Q ss_pred cchhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 047859 37 ENCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLG 105 (214)
Q Consensus 37 ~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~ 105 (214)
...-+..|..++..|+|=+|-+.++.+-...+... ..+.. .|......|++..|...+.+++.
T Consensus 38 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~----~~~~~--~a~~~~~~~~~~~A~~~~~~~~~ 100 (118)
T 1elw_A 38 HVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWG----KGYSR--KAAALEFLNRFEEAKRTYEEGLK 100 (118)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH----HHHHH--HHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccH----HHHHH--HHHHHHHHhhHHHHHHHHHHHHH
Confidence 34456678888899999999999999888765422 22333 34445678999999999998874
No 67
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=74.62 E-value=17 Score=24.87 Aligned_cols=65 Identities=9% Similarity=-0.036 Sum_probs=49.6
Q ss_pred cchhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 047859 37 ENCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKL 107 (214)
Q Consensus 37 ~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L 107 (214)
...-+..|..++..|+|=+|-+.++.+-...+.. ..++..+ |..+...|++..|...+++++..-
T Consensus 38 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~----~~~~~~l--g~~~~~~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 38 ARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNF----VRAYIRK--ATAQIAVKEYASALETLDAARTKD 102 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC----HHHHHHH--HHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc----HHHHHHH--HHHHHHHhCHHHHHHHHHHHHHhC
Confidence 3455677888999999999999999988776543 2333333 445667899999999999998764
No 68
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=74.62 E-value=6.1 Score=29.39 Aligned_cols=69 Identities=12% Similarity=0.075 Sum_probs=46.6
Q ss_pred chhHHHHHHHhccCCchhhhhhhHHhhccCCcch----------hhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 38 NCSFDEAVALFNERAYYKCHDCLESLWYTAEEPT----------RTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 38 ~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~e----------r~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
..-+.-|..++..|+|=+|-+.++.+-...++.. ......-+....|..+...|++..|...+.+++..
T Consensus 72 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 150 (213)
T 1hh8_A 72 VAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSM 150 (213)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHc
Confidence 4455677888888999999888888776555322 11111223344455667889999999999998753
No 69
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=74.51 E-value=16 Score=24.91 Aligned_cols=62 Identities=8% Similarity=-0.031 Sum_probs=45.4
Q ss_pred hhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 39 CSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 39 ~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
.-+..|..++..|+|=+|-+.++.+-...+.. ...+..+ |..+...|++..|...+.+++..
T Consensus 67 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~----~~~~~~~--a~~~~~~~~~~~A~~~~~~al~~ 128 (148)
T 2dba_A 67 LHRNRAACHLKLEDYDKAETEASKAIEKDGGD----VKALYRR--SQALEKLGRLDQAVLDLQRCVSL 128 (148)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCC----HHHHHHH--HHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHhhCccC----HHHHHHH--HHHHHHcCCHHHHHHHHHHHHHc
Confidence 34556778888999999999999887765533 2333333 34456689999999999999864
No 70
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=74.36 E-value=15 Score=28.70 Aligned_cols=63 Identities=14% Similarity=0.083 Sum_probs=47.0
Q ss_pred HHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 42 DEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 42 ~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
..|..++..|+|=+|-+.++.+-...+.........+.. .|..+...|++..|...+.+++..
T Consensus 239 ~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~--la~~~~~~~~~~~A~~~~~~~~~~ 301 (359)
T 3ieg_A 239 ESAEELIRDGRYTDATSKYESVMKTEPSVAEYTVRSKER--ICHCFSKDEKPVEAIRICSEVLQM 301 (359)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCCSSHHHHHHHHHH--HHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHH--HHHHHHHccCHHHHHHHHHHHHHh
Confidence 447778899999999999999888776543333333333 445566789999999999999864
No 71
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=73.96 E-value=9.8 Score=26.66 Aligned_cols=61 Identities=15% Similarity=0.052 Sum_probs=33.3
Q ss_pred hHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 40 SFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 40 ~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
-+..|..++..|+|=+|-+.++.+-...+... . +....|..+...|++..|...+.+++..
T Consensus 45 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~----~--~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 105 (186)
T 3as5_A 45 ALHLGIAYVKTGAVDRGTELLERSLADAPDNV----K--VATVLGLTYVQVQKYDLAVPLLIKVAEA 105 (186)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH----H--HHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCH----H--HHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 34445555666677666666666655443221 1 1222334445566677777777666643
No 72
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=72.44 E-value=17 Score=29.63 Aligned_cols=69 Identities=7% Similarity=-0.119 Sum_probs=53.8
Q ss_pred HHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhc
Q 047859 41 FDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRKM 110 (214)
Q Consensus 41 l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L~~~ 110 (214)
+..|..++..|+|=+|-+.++..-...+.. .....+.+....|..+...|++..|...+++|+......
T Consensus 18 ~~~a~~~~~~g~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 86 (373)
T 1hz4_A 18 ALRAQVAINDGNPDEAERLAKLALEELPPG-WFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQH 86 (373)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCCTT-CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHcCCCC-chhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhc
Confidence 456778888999999999999877665522 234566667777888899999999999999999866543
No 73
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=72.41 E-value=13 Score=34.31 Aligned_cols=65 Identities=9% Similarity=0.031 Sum_probs=45.7
Q ss_pred HHHHhccCCchhhhhhhHHh---hccCCc-chhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhc
Q 047859 44 AVALFNERAYYKCHDCLESL---WYTAEE-PTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRKM 110 (214)
Q Consensus 44 gi~LFN~G~YfEAHEVLEe~---Wk~~~g-~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L~~~ 110 (214)
|..+.+.|+|=+|-+..+.. |...-| +.-.....+-.+| ..+...|++..|..++++|+..+...
T Consensus 358 a~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa--~~~~~~G~~~eA~~~~~~Al~i~~~~ 426 (490)
T 3n71_A 358 SEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAG--LTNWHAGHIEVGHGMICKAYAILLVT 426 (490)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHH--HHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH--HHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 44556689999998877763 443333 3333444555554 45667799999999999999998876
No 74
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=71.45 E-value=14 Score=28.55 Aligned_cols=66 Identities=12% Similarity=-0.057 Sum_probs=49.4
Q ss_pred chhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 38 NCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 38 ~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
...+..|..++..|+|=+|-+.++.+-...|... ..-.++.++ |......|++..|...+.+++..
T Consensus 5 ~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~-~~~~a~~~l--g~~~~~~~~~~~A~~~~~~~l~~ 70 (225)
T 2yhc_A 5 NEIYATAQQKLQDGNWRQAITQLEALDNRYPFGP-YSQQVQLDL--IYAYYKNADLPLAQAAIDRFIRL 70 (225)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTST-THHHHHHHH--HHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCh-HHHHHHHHH--HHHHHhcCCHHHHHHHHHHHHHH
Confidence 4567889999999999999999999988766321 112333443 44556789999999999998753
No 75
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=71.22 E-value=12 Score=28.95 Aligned_cols=71 Identities=7% Similarity=-0.118 Sum_probs=52.0
Q ss_pred hHHHHHHHhccCCchhhhhhhHHhhccCCc--chhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhc
Q 047859 40 SFDEAVALFNERAYYKCHDCLESLWYTAEE--PTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRKM 110 (214)
Q Consensus 40 ~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g--~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L~~~ 110 (214)
-+.-|..++..|+|-+|-+.++........ .........+....|..+...|++..|...+.+++......
T Consensus 114 ~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~ 186 (311)
T 3nf1_A 114 LNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTK 186 (311)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 445677778899999999999988765421 01123344555566777889999999999999999887654
No 76
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=70.87 E-value=20 Score=26.05 Aligned_cols=23 Identities=13% Similarity=0.203 Sum_probs=10.6
Q ss_pred HHHHHhccCCchhhhhhhHHhhc
Q 047859 43 EAVALFNERAYYKCHDCLESLWY 65 (214)
Q Consensus 43 ~gi~LFN~G~YfEAHEVLEe~Wk 65 (214)
.|..++..|+|-+|-+.++.+-.
T Consensus 14 ~~~~~~~~~~~~~A~~~~~~~~~ 36 (225)
T 2vq2_A 14 LAMEYMRGQDYRQATASIEDALK 36 (225)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHH
Confidence 34444444555444444444443
No 77
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=70.51 E-value=16 Score=27.45 Aligned_cols=71 Identities=8% Similarity=-0.157 Sum_probs=50.0
Q ss_pred hHHHHHHHhccCCchhhhhhhHHhhccCC--cchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhc
Q 047859 40 SFDEAVALFNERAYYKCHDCLESLWYTAE--EPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRKM 110 (214)
Q Consensus 40 ~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~--g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L~~~ 110 (214)
-+.-|..++..|+|=+|-+.++..-.... ..........+....|..+...|++..|...+.+++......
T Consensus 130 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~~ 202 (283)
T 3edt_B 130 LNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHEK 202 (283)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 45567778889999999999998776522 111122333444455666778899999999999999876553
No 78
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=70.11 E-value=20 Score=26.67 Aligned_cols=63 Identities=10% Similarity=-0.022 Sum_probs=47.0
Q ss_pred chhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 38 NCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 38 ~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
..-+..|..++..|+|=+|-+.++.+....+... .+....|..+...|++..|...+.+++..
T Consensus 140 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~------~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 202 (258)
T 3uq3_A 140 EEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDA------RGYSNRAAALAKLMSFPEAIADCNKAIEK 202 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH------HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccH------HHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 3445677888889999999999999888765432 23334455667889999999999999764
No 79
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=69.68 E-value=17 Score=32.62 Aligned_cols=66 Identities=17% Similarity=0.014 Sum_probs=46.8
Q ss_pred HHHHhccCCchhhhhhhHH---hhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhc
Q 047859 44 AVALFNERAYYKCHDCLES---LWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRKM 110 (214)
Q Consensus 44 gi~LFN~G~YfEAHEVLEe---~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L~~~ 110 (214)
|..+.+.|+|=+|=+..+. +++..-| ....-.|....-.|..+...|++..|..++++|+..+...
T Consensus 336 ~~~y~~~g~~~eA~~~~~~~L~i~~~~lg-~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~ 404 (429)
T 3qwp_A 336 MDACINLGLLEEALFYGTRTMEPYRIFFP-GSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVT 404 (429)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHHHHSC-SSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhccHHHHHHHHHHHHHhHHHHcC-CCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Confidence 4456679999888877774 3443333 2334445555555666777999999999999999999876
No 80
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=68.98 E-value=22 Score=25.86 Aligned_cols=58 Identities=3% Similarity=-0.070 Sum_probs=24.3
Q ss_pred HHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 047859 42 DEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLG 105 (214)
Q Consensus 42 ~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~ 105 (214)
..|..++..|+|=+|-+.++......+... . +....|..+...|++..|...+++++.
T Consensus 118 ~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~-~-----~~~~la~~~~~~~~~~~A~~~~~~~~~ 175 (225)
T 2vq2_A 118 NKGICSAKQGQFGLAEAYLKRSLAAQPQFP-P-----AFKELARTKMLAGQLGDADYYFKKYQS 175 (225)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTCH-H-----HHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCc-h-----HHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 334444445555555555544444333210 0 111222233444555555555555543
No 81
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=67.46 E-value=17 Score=32.93 Aligned_cols=67 Identities=6% Similarity=-0.027 Sum_probs=47.1
Q ss_pred HHHHHhccCCchhhhhhhHHh---hccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhc
Q 047859 43 EAVALFNERAYYKCHDCLESL---WYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRKM 110 (214)
Q Consensus 43 ~gi~LFN~G~YfEAHEVLEe~---Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L~~~ 110 (214)
-|..+.+.|+|=+|-+..+.. |+..-|+ ...-.|....-.|..+...|++..|..++++|+..+...
T Consensus 346 La~~y~~~g~~~eA~~~~~~aL~i~~~~lG~-~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~ 415 (433)
T 3qww_A 346 AMGVCLYMQDWEGALKYGQKIIKPYSKHYPV-YSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVA 415 (433)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHSCS-SCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcCHHHHHHHHHHHHHHHHHHcCC-CChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 456667799999998887764 3333232 233344444445556778899999999999999998875
No 82
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=66.67 E-value=14 Score=30.65 Aligned_cols=70 Identities=10% Similarity=0.120 Sum_probs=53.0
Q ss_pred HHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhc
Q 047859 41 FDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRKM 110 (214)
Q Consensus 41 l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L~~~ 110 (214)
..-|..++..|+|=+|-+.++..-.-.+........+.+..-.|..+...|++..|...+.+|+......
T Consensus 188 ~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~ 257 (383)
T 3ulq_A 188 SLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEES 257 (383)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhh
Confidence 3446667778999999998888776655333344556666667888889999999999999999876654
No 83
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=66.57 E-value=12 Score=30.60 Aligned_cols=64 Identities=13% Similarity=0.125 Sum_probs=37.6
Q ss_pred HHHHHHhccCCchhhhhhhHHhhccCCcchh-hHHHHHH---------------------------HHHHHHHHHhcCCH
Q 047859 42 DEAVALFNERAYYKCHDCLESLWYTAEEPTR-TLIHGVL---------------------------QCAVGFYHLFNQNH 93 (214)
Q Consensus 42 ~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er-~~lqGLI---------------------------QlAvAl~H~~rGN~ 93 (214)
..|..+|..|+|=+|-+.++.++...|.... ....|.+ ....|....+.|++
T Consensus 4 ~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~a~~~~~~a~~~~p~~~~~~~~lg~~~~~~g~~ 83 (388)
T 1w3b_A 4 ELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQL 83 (388)
T ss_dssp THHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCH
T ss_pred hHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCH
Confidence 3466777777777777777777776653221 1111111 22234445566777
Q ss_pred HHHHHHHHHHHH
Q 047859 94 KGAMMELGEGLG 105 (214)
Q Consensus 94 ~GA~~Ll~rAl~ 105 (214)
..|...+++++.
T Consensus 84 ~~A~~~~~~al~ 95 (388)
T 1w3b_A 84 QEAIEHYRHALR 95 (388)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 777777777764
No 84
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=66.08 E-value=25 Score=26.05 Aligned_cols=63 Identities=14% Similarity=0.095 Sum_probs=47.1
Q ss_pred chhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 38 NCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 38 ~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
..-+..|..++..|+|=+|-+.++.+....+.... +....|..+...|++..|...+.+++..
T Consensus 92 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~------~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 154 (243)
T 2q7f_A 92 TAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGD------LFYMLGTVLVKLEQPKLALPYLQRAVEL 154 (243)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHH------HHHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHH------HHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 33455677788899999999999998887664322 2334455667899999999999999865
No 85
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=66.02 E-value=28 Score=24.67 Aligned_cols=65 Identities=9% Similarity=-0.100 Sum_probs=49.4
Q ss_pred cchhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 047859 37 ENCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKL 107 (214)
Q Consensus 37 ~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L 107 (214)
...-+.-|..++..|+|=+|-+.++.+-...|..... + ...|..+...|++..|...+++++..-
T Consensus 52 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~----~--~~lg~~~~~~g~~~~A~~~~~~al~~~ 116 (142)
T 2xcb_A 52 ARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRF----P--FHAAECHLQLGDLDGAESGFYSARALA 116 (142)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHH----H--HHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHH----H--HHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 4445667888899999999999999988877643322 2 234555677899999999999998654
No 86
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=65.74 E-value=23 Score=27.64 Aligned_cols=26 Identities=4% Similarity=-0.054 Sum_probs=13.5
Q ss_pred HHHHHHHhccCCchhhhhhhHHhhcc
Q 047859 41 FDEAVALFNERAYYKCHDCLESLWYT 66 (214)
Q Consensus 41 l~~gi~LFN~G~YfEAHEVLEe~Wk~ 66 (214)
+..|..++..|+|-+|-+.++.+-..
T Consensus 7 ~~~~~~~~~~g~~~~A~~~~~~~l~~ 32 (359)
T 3ieg_A 7 LELGKKLLAAGQLADALSQFHAAVDG 32 (359)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 44455555555555555555554443
No 87
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=65.66 E-value=24 Score=29.65 Aligned_cols=67 Identities=13% Similarity=0.077 Sum_probs=49.8
Q ss_pred hHHHHHHHhccCCchhhhhhhHHhhccCCcch---------hhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 40 SFDEAVALFNERAYYKCHDCLESLWYTAEEPT---------RTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 40 ~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~e---------r~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
-...|..+|..|+|-+|-+.++.+-...+... ..-+...+..-.|..+...|++..|...+.+|+..
T Consensus 150 ~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 225 (336)
T 1p5q_A 150 VKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALEL 225 (336)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 45678899999999999999998877766331 12223344455566778889999999999999864
No 88
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=65.31 E-value=22 Score=26.53 Aligned_cols=69 Identities=12% Similarity=-0.017 Sum_probs=48.7
Q ss_pred cchhHHHHHHHhccCCchhhhhhhHHhhccCCcc-hhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 047859 37 ENCSFDEAVALFNERAYYKCHDCLESLWYTAEEP-TRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLG 105 (214)
Q Consensus 37 ~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~-er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~ 105 (214)
...-+..|..++..|+|=+|-+.++.+-...+.. ........+....|..+...|++..|...+.+++.
T Consensus 38 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 107 (258)
T 3uq3_A 38 ITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLT 107 (258)
T ss_dssp THHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHh
Confidence 3455667888888999999999888877655421 11222234445556667788999999999999987
No 89
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=65.28 E-value=28 Score=25.68 Aligned_cols=64 Identities=13% Similarity=0.076 Sum_probs=46.8
Q ss_pred chhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 047859 38 NCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKL 107 (214)
Q Consensus 38 ~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L 107 (214)
..-+..|..++..|+|-+|-+.++.+-...+.. ...+.. .|..+...|++..|...+.+++...
T Consensus 38 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~----~~~~~~--lg~~~~~~~~~~~A~~~~~~al~~~ 101 (213)
T 1hh8_A 38 RICFNIGCMYTILKNMTEAEKAFTRSINRDKHL----AVAYFQ--RGMLYYQTEKYDLAIKDLKEALIQL 101 (213)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC----HHHHHH--HHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc----hHHHHH--HHHHHHHcccHHHHHHHHHHHHHhC
Confidence 455667888888999999999998877765432 233333 3455667899999999999998754
No 90
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=65.03 E-value=17 Score=29.51 Aligned_cols=65 Identities=8% Similarity=-0.017 Sum_probs=41.8
Q ss_pred cchhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 047859 37 ENCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKL 107 (214)
Q Consensus 37 ~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L 107 (214)
..--+..|..++..|+|=+|-+.++.+-...++. ..++..+ |..+...|++..|...+++|+..-
T Consensus 38 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~----~~~~~~l--g~~~~~~g~~~~A~~~~~~al~l~ 102 (281)
T 2c2l_A 38 AVYYTNRALCYLKMQQPEQALADCRRALELDGQS----VKAHFFL--GQCQLEMESYDEAIANLQRAYSLA 102 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTC----HHHHHHH--HHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC----HHHHHHH--HHHHHHcCCHHHHHHHHHHHHHhC
Confidence 3334455666677777777777777766554432 2333344 445567889999999999988643
No 91
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=63.82 E-value=15 Score=30.51 Aligned_cols=70 Identities=13% Similarity=-0.034 Sum_probs=51.7
Q ss_pred HHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhc
Q 047859 41 FDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRKM 110 (214)
Q Consensus 41 l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L~~~ 110 (214)
..-|..++..|+|=+|-+.++.+-.-.+........+.+..-.|..+...|++..|...+.+|+......
T Consensus 186 ~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~ 255 (378)
T 3q15_A 186 FVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREK 255 (378)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhh
Confidence 3567777888999999888888766544222233556666667777888999999999999999876654
No 92
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=63.52 E-value=31 Score=25.22 Aligned_cols=65 Identities=8% Similarity=-0.214 Sum_probs=48.9
Q ss_pred cchhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 047859 37 ENCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKL 107 (214)
Q Consensus 37 ~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L 107 (214)
...-+.-|..++..|+|=+|-+.++.+-...|.... .+ .-.|..+...|++..|...+++++..-
T Consensus 55 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~----~~--~~lg~~~~~~g~~~~A~~~~~~al~~~ 119 (148)
T 2vgx_A 55 SRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPR----FP--FHAAECLLQXGELAEAESGLFLAQELI 119 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTH----HH--HHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCch----HH--HHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 344566788889999999999999998887664322 22 223555678899999999999998654
No 93
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=63.31 E-value=17 Score=30.13 Aligned_cols=65 Identities=8% Similarity=-0.050 Sum_probs=43.7
Q ss_pred CcchhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 36 GENCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 36 e~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
+...-+..|..++..|+|-+|-+.++.+-...+.. .. +....|..+...|++..|...+.+++..
T Consensus 25 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~----~~--~~~~l~~~~~~~g~~~~A~~~~~~al~~ 89 (450)
T 2y4t_A 25 DVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDN----YI--AYYRRATVFLAMGKSKAALPDLTKVIQL 89 (450)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC----HH--HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCcc----HH--HHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 34556777888899999999999998876654432 11 2222344455678888888888877653
No 94
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=63.12 E-value=15 Score=30.36 Aligned_cols=29 Identities=14% Similarity=0.157 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 047859 77 GVLQCAVGFYHLFNQNHKGAMMELGEGLG 105 (214)
Q Consensus 77 GLIQlAvAl~H~~rGN~~GA~~Ll~rAl~ 105 (214)
+-|-++-|-+..++||...|++++++|+.
T Consensus 94 AKiwi~~AqFEiRqgnl~kARkILg~AiG 122 (161)
T 4h7y_A 94 AFVHISFAQFELSQGNVKKSKQLLQKAVE 122 (161)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHhc
Confidence 55788889999999999999999999997
No 95
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=62.55 E-value=36 Score=24.71 Aligned_cols=63 Identities=11% Similarity=0.103 Sum_probs=47.9
Q ss_pred chhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 38 NCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 38 ~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
...|.-|..+|..|+|=+|-+.++.+=...|.... + ....|..+...|++..|...+++|+..
T Consensus 32 ~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~----a--~~~lg~~~~~~~~~~~A~~~~~~al~~ 94 (150)
T 4ga2_A 32 IKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPK----A--HRFLGLLYELEENTDKAVECYRRSVEL 94 (150)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH----H--HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH----H--HHHHHHHHHHcCchHHHHHHHHHHHHh
Confidence 34577788899999999999999998776654321 2 233355667889999999999999854
No 96
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=62.11 E-value=47 Score=25.69 Aligned_cols=67 Identities=13% Similarity=0.009 Sum_probs=49.1
Q ss_pred chhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhc
Q 047859 38 NCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRKM 110 (214)
Q Consensus 38 ~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L~~~ 110 (214)
...+.-|..++..|+|=+|-+.++.+....+... .+....|..+...|++..|...+++++......
T Consensus 160 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~------~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~ 226 (330)
T 3hym_B 160 LPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDP------FVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAI 226 (330)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCH------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCCh------HHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhc
Confidence 4455567777888888888888888887765431 223344556778999999999999999877554
No 97
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=62.11 E-value=35 Score=24.25 Aligned_cols=64 Identities=11% Similarity=0.019 Sum_probs=47.7
Q ss_pred cchhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 37 ENCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 37 ~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
...-+..|..++..|+|-+|-+.++.+=.-.+.. ..++..+ |..+...|++..|...+++|+..
T Consensus 47 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~----~~a~~~l--g~~~~~~~~~~~A~~~~~~al~l 110 (126)
T 4gco_A 47 AILYSNRAACLTKLMEFQRALDDCDTCIRLDSKF----IKGYIRK--AACLVAMREWSKAQRAYEDALQV 110 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC----HHHHHHH--HHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhh----hHHHHHH--HHHHHHCCCHHHHHHHHHHHHHH
Confidence 4455667899999999999999998876654432 3344444 44556789999999999999863
No 98
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=62.08 E-value=37 Score=26.07 Aligned_cols=63 Identities=10% Similarity=-0.033 Sum_probs=47.5
Q ss_pred chhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 38 NCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 38 ~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
..-+..|..++..|+|=+|-+.++.+=...|+... . ....|....+.|++..|...+++++..
T Consensus 6 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~----a--~~~lg~~~~~~g~~~~A~~~~~~al~~ 68 (217)
T 2pl2_A 6 QNPLRLGVQLYALGRYDAALTLFERALKENPQDPE----A--LYWLARTQLKLGLVNPALENGKTLVAR 68 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHH----H--HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH----H--HHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 34577899999999999999999988777664322 1 223344566789999999999998854
No 99
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=61.82 E-value=30 Score=26.74 Aligned_cols=57 Identities=11% Similarity=-0.077 Sum_probs=24.6
Q ss_pred HHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 047859 43 EAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLG 105 (214)
Q Consensus 43 ~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~ 105 (214)
.|..++..|+|=+|-+.++.+-...+.... +....|......|++..|...+++++.
T Consensus 212 l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~------~~~~l~~~~~~~g~~~~A~~~~~~a~~ 268 (327)
T 3cv0_A 212 LGATLANGNRPQEALDAYNRALDINPGYVR------VMYNMAVSYSNMSQYDLAAKQLVRAIY 268 (327)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHH------HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHcCCCCHH------HHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 344444455555555555544443332111 111223333445555555555555544
No 100
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=61.21 E-value=24 Score=28.75 Aligned_cols=60 Identities=13% Similarity=-0.014 Sum_probs=37.0
Q ss_pred CCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhc
Q 047859 51 RAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRKM 110 (214)
Q Consensus 51 G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L~~~ 110 (214)
|+|-+|-+.++..-.-.+........+-+..-.|..+...|++..|...+++++......
T Consensus 129 g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 188 (307)
T 2ifu_A 129 LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEM 188 (307)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc
Confidence 677777777766544333222222333444455666778888888888888888765543
No 101
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=60.93 E-value=34 Score=25.88 Aligned_cols=61 Identities=10% Similarity=0.013 Sum_probs=38.4
Q ss_pred hHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 40 SFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 40 ~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
-+..|..++..|+|=+|-+.++.+-...+.... . ....|..+...|++..|...+.+++..
T Consensus 46 ~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~-~-----~~~la~~~~~~~~~~~A~~~~~~al~~ 106 (275)
T 1xnf_A 46 LYERGVLYDSLGLRALARNDFSQALAIRPDMPE-V-----FNYLGIYLTQAGNFDAAYEAFDSVLEL 106 (275)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHH-H-----HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHH-H-----HHHHHHHHHHccCHHHHHHHHHHHHhc
Confidence 345677777788888888888776665443211 1 222344456677777777777777653
No 102
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=60.72 E-value=33 Score=25.56 Aligned_cols=62 Identities=13% Similarity=0.192 Sum_probs=46.5
Q ss_pred hhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 39 CSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 39 ~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
.-+..|..++..|+|=+|-+.++.+-...+.. ..++..+ |..+...|++..|...+.+|+..
T Consensus 90 ~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~----~~~~~~l--g~~~~~~~~~~~A~~~~~~al~~ 151 (198)
T 2fbn_A 90 CNLNLATCYNKNKDYPKAIDHASKVLKIDKNN----VKALYKL--GVANMYFGFLEEAKENLYKAASL 151 (198)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC----HHHHHHH--HHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCccc----HHHHHHH--HHHHHHcccHHHHHHHHHHHHHH
Confidence 44567888889999999999999887765533 2333444 44456789999999999999864
No 103
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=60.34 E-value=32 Score=27.43 Aligned_cols=72 Identities=6% Similarity=-0.028 Sum_probs=54.1
Q ss_pred chhHHHHHHHhccCCchhhhhhhHHhhccCCcc------hhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhh
Q 047859 38 NCSFDEAVALFNERAYYKCHDCLESLWYTAEEP------TRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRK 109 (214)
Q Consensus 38 ~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~------er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L~~ 109 (214)
...+..|..+|..|+|=+|=+.+.....-.|.. .-.-...++..--|......|++..|...+.+|+..+..
T Consensus 12 ~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~ 89 (159)
T 2hr2_A 12 YLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR 89 (159)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence 456788999999999999999999998887751 111123335555566667779999999999999987443
No 104
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=60.08 E-value=28 Score=22.22 Aligned_cols=64 Identities=14% Similarity=0.035 Sum_probs=45.9
Q ss_pred chhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhc-CCHHHHHHHHHHHHH
Q 047859 38 NCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFN-QNHKGAMMELGEGLG 105 (214)
Q Consensus 38 ~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~r-GN~~GA~~Ll~rAl~ 105 (214)
..-+..|..++..|+|=+|-+.++..=...+. ......+ ...|...... |++..|...+++++.
T Consensus 41 ~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~--~~~~~~~--~~l~~~~~~~~~~~~~A~~~~~~~~~ 105 (112)
T 2kck_A 41 KYWLMKGKALYNLERYEEAVDCYNYVINVIED--EYNKDVW--AAKADALRYIEGKEVEAEIAEARAKL 105 (112)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCC--TTCHHHH--HHHHHHHTTCSSCSHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc--cchHHHH--HHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 44567788889999999999999987766544 1112222 3345556788 999999999998864
No 105
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=60.00 E-value=35 Score=26.00 Aligned_cols=58 Identities=19% Similarity=0.080 Sum_probs=45.5
Q ss_pred HHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 43 EAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 43 ~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
-|..++..|+|=+|-+.++.+=...|... ..+ ...|..+...|++..|...+++++..
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~~~----~~~--~~lg~~~~~~g~~~~A~~~~~~al~~ 117 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPNNV----DCL--EACAEMQVCRGQEKDALRMYEKILQL 117 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCH----HHH--HHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCCCH----HHH--HHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 78889999999999999999888766432 222 23355567889999999999999863
No 106
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=59.71 E-value=36 Score=26.40 Aligned_cols=68 Identities=6% Similarity=0.043 Sum_probs=50.0
Q ss_pred chhHHHHHHHhc--------cCCchhhhhhhHHhhccCCcchhhHHHHH--H----------HHHHHHHHHhcCCHHHHH
Q 047859 38 NCSFDEAVALFN--------ERAYYKCHDCLESLWYTAEEPTRTLIHGV--L----------QCAVGFYHLFNQNHKGAM 97 (214)
Q Consensus 38 ~~~l~~gi~LFN--------~G~YfEAHEVLEe~Wk~~~g~er~~lqGL--I----------QlAvAl~H~~rGN~~GA~ 97 (214)
..-+..|..++. .|+|=+|-+.++.+-...|+... ...++ + .+-.|..+...|++..|.
T Consensus 90 ~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~-~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 168 (261)
T 3qky_A 90 QAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHEL-VDDATQKIRELRAKLARKQYEAARLYERRELYEAAA 168 (261)
T ss_dssp HHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHH
Confidence 445677888888 99999999999998887763221 12221 1 144566778899999999
Q ss_pred HHHHHHHHH
Q 047859 98 MELGEGLGK 106 (214)
Q Consensus 98 ~Ll~rAl~~ 106 (214)
..+++++..
T Consensus 169 ~~~~~~l~~ 177 (261)
T 3qky_A 169 VTYEAVFDA 177 (261)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998864
No 107
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=59.65 E-value=18 Score=29.56 Aligned_cols=62 Identities=11% Similarity=-0.038 Sum_probs=46.2
Q ss_pred HHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 047859 43 EAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGL 104 (214)
Q Consensus 43 ~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl 104 (214)
-|..++..|+|=+|-+.++..-...+........+...+..|+.+...|++..|...+++++
T Consensus 161 lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al 222 (307)
T 2ifu_A 161 ASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY 222 (307)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 45666678899899888888766544222233445566778888999999999999999998
No 108
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=59.42 E-value=30 Score=28.89 Aligned_cols=60 Identities=10% Similarity=0.047 Sum_probs=40.9
Q ss_pred hhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 047859 39 CSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLG 105 (214)
Q Consensus 39 ~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~ 105 (214)
.-+..|..+|..|+|-+|-+.++.+=...|. ...+ ...|..+...|++..|...+.+++.
T Consensus 8 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~--~~~~-----~~la~~~~~~g~~~~A~~~~~~al~ 67 (514)
T 2gw1_A 8 ALKDKGNQFFRNKKYDDAIKYYNWALELKED--PVFY-----SNLSACYVSVGDLKKVVEMSTKALE 67 (514)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHHHHHHHCCC--HHHH-----HHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhcCcc--HHHH-----HhHHHHHHHHhhHHHHHHHHHHHhc
Confidence 3567788888888888888888887666542 2222 2234445567888888888888775
No 109
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=59.24 E-value=37 Score=25.53 Aligned_cols=25 Identities=12% Similarity=0.050 Sum_probs=13.3
Q ss_pred HHHHHHHhccCCchhhhhhhHHhhc
Q 047859 41 FDEAVALFNERAYYKCHDCLESLWY 65 (214)
Q Consensus 41 l~~gi~LFN~G~YfEAHEVLEe~Wk 65 (214)
+..|..++..|+|=+|-+.++.+..
T Consensus 109 ~~la~~~~~~g~~~~A~~~~~~~~~ 133 (252)
T 2ho1_A 109 NNYGGFLYEQKRYEEAYQRLLEASQ 133 (252)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 3344455555555555555555554
No 110
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=58.88 E-value=37 Score=24.36 Aligned_cols=62 Identities=10% Similarity=-0.022 Sum_probs=46.5
Q ss_pred hhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 39 CSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 39 ~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
--+..|..++..|+|-+|-+.++.+-...|.. ..++..++. .+...|++..|...+.+|+..
T Consensus 65 ~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~----~~a~~~~g~--~~~~~g~~~~A~~~~~~al~l 126 (162)
T 3rkv_A 65 LYANMSQCYLNIGDLHEAEETSSEVLKREETN----EKALFRRAK--ARIAAWKLDEAEEDLKLLLRN 126 (162)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC----HHHHHHHHH--HHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHhcCCcc----hHHHHHHHH--HHHHHhcHHHHHHHHHHHHhc
Confidence 34556888889999999999998887765543 344444444 456779999999999999864
No 111
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=58.32 E-value=53 Score=26.20 Aligned_cols=66 Identities=14% Similarity=0.043 Sum_probs=40.6
Q ss_pred HHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhc
Q 047859 45 VALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRKM 110 (214)
Q Consensus 45 i~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L~~~ 110 (214)
..+...|+|=+|-+.++.+-............+.+....|......|++..|...+.+|+......
T Consensus 123 ~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~ 188 (293)
T 2qfc_A 123 AYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEAL 188 (293)
T ss_dssp HHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc
Confidence 334456677666666665543333211122233344455667778899999999999999777665
No 112
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=57.42 E-value=24 Score=28.50 Aligned_cols=65 Identities=15% Similarity=0.046 Sum_probs=46.9
Q ss_pred HHHHHHhccCCchhhhhhhHHhhccCCcchh-hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 42 DEAVALFNERAYYKCHDCLESLWYTAEEPTR-TLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 42 ~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er-~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
.-|..++..|+|=+|-+.++.+-...+.... .+...-.....|+.+...|+...|...+++++..
T Consensus 163 ~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l 228 (292)
T 1qqe_A 163 KCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSE 228 (292)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 4477778899999999999999887764322 1112223344566778899999999999988754
No 113
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=57.25 E-value=46 Score=24.00 Aligned_cols=59 Identities=8% Similarity=-0.044 Sum_probs=36.3
Q ss_pred HHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 047859 41 FDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLG 105 (214)
Q Consensus 41 l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~ 105 (214)
+.-|..++..|+|=+|-+.++.+-...|... ..+..+ |..+...|++..|...+.++..
T Consensus 9 ~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~----~~~~~l--a~~~~~~~~~~~a~~~~~~~~~ 67 (184)
T 3vtx_A 9 MDIGDKKRTKGDFDGAIRAYKKVLKADPNNV----ETLLKL--GKTYMDIGLPNDAIESLKKFVV 67 (184)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH----HHHHHH--HHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH----HHHHHH--HHHHHHCCCHHHHHHHHHHHHh
Confidence 3457777777888888777777776655321 222222 3344566777777777776654
No 114
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=56.49 E-value=51 Score=26.30 Aligned_cols=68 Identities=16% Similarity=0.063 Sum_probs=50.1
Q ss_pred hHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 047859 40 SFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKL 107 (214)
Q Consensus 40 ~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L 107 (214)
-+..+..+++.|+|=+|-+.++..=...+...........+...|.+....|++..|...+.+|+...
T Consensus 78 l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 145 (293)
T 2qfc_A 78 FKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQ 145 (293)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 35677888999999999888877655544322223344445667888899999999999999998654
No 115
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=56.22 E-value=47 Score=26.42 Aligned_cols=64 Identities=14% Similarity=0.034 Sum_probs=44.6
Q ss_pred cchhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 37 ENCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 37 ~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
...-+..|..++..|+|=+|-+.++.+=...+.... . ....|..+...|++..|...+++++..
T Consensus 64 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~----~--~~~l~~~~~~~g~~~~A~~~~~~al~~ 127 (368)
T 1fch_A 64 HPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHME----A--WQYLGTTQAENEQELLAISALRRCLEL 127 (368)
T ss_dssp CSSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHH----H--HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHH----H--HHHHHHHHHHCcCHHHHHHHHHHHHhc
Confidence 445678899999999999999999987766553221 1 222344556677888888888777653
No 116
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=55.62 E-value=34 Score=27.60 Aligned_cols=26 Identities=8% Similarity=0.100 Sum_probs=12.6
Q ss_pred HHHHHHhccCCchhhhhhhHHhhccC
Q 047859 42 DEAVALFNERAYYKCHDCLESLWYTA 67 (214)
Q Consensus 42 ~~gi~LFN~G~YfEAHEVLEe~Wk~~ 67 (214)
.-|..++..|+|=+|-+.++.+-...
T Consensus 218 ~l~~~~~~~g~~~~A~~~~~~al~~~ 243 (365)
T 4eqf_A 218 GLGVLFHLSGEFNRAIDAFNAALTVR 243 (365)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHhC
Confidence 34444444555555555555544443
No 117
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=54.87 E-value=39 Score=24.74 Aligned_cols=65 Identities=6% Similarity=-0.112 Sum_probs=37.1
Q ss_pred chhHHHHHHHhccCCchhhhhhhHHhhccCCcc-hhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 047859 38 NCSFDEAVALFNERAYYKCHDCLESLWYTAEEP-TRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKL 107 (214)
Q Consensus 38 ~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~-er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L 107 (214)
...+.-|..++..|+|=+|-+.++.+=...|+. ....+..|. ......|+...|...+++++..+
T Consensus 109 ~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~-----~~~~~~g~~~~A~~~y~~al~~~ 174 (176)
T 2r5s_A 109 ELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFM-----DILSALGQGNAIASKYRRQLYSI 174 (176)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHH-----HHHHHHCSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHH-----HHHHHhCCCCcHHHHHHHHHHHH
Confidence 444556666666777777777777666555432 222333332 23335566667777777776543
No 118
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=54.63 E-value=41 Score=29.63 Aligned_cols=67 Identities=10% Similarity=-0.037 Sum_probs=47.9
Q ss_pred hHHHHHHHhccCCchhhhhhhHHhhccCCcch---------hhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 40 SFDEAVALFNERAYYKCHDCLESLWYTAEEPT---------RTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 40 ~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~e---------r~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
-...|..+|..|+|-+|-+.++.+-...+... ..-....+..-.|..+...|++..|...+.+|+..
T Consensus 271 ~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 346 (457)
T 1kt0_A 271 VKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGL 346 (457)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 45678899999999999999998776555321 11222333444555667889999999999998864
No 119
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=53.90 E-value=53 Score=25.37 Aligned_cols=64 Identities=3% Similarity=-0.112 Sum_probs=40.3
Q ss_pred CcchhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 047859 36 GENCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLG 105 (214)
Q Consensus 36 e~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~ 105 (214)
+.+-.+..|..+|..|+|=+|-+.++.+....+..... +..++ .. ....|++..|...+.+++.
T Consensus 21 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~-~~~~~---~~--~~~~~~~~~A~~~~~~~~~ 84 (330)
T 3hym_B 21 NLDVVVSLAERHYYNCDFKMCYKLTSVVMEKDPFHASC-LPVHI---GT--LVELNKANELFYLSHKLVD 84 (330)
T ss_dssp CCTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTT-HHHHH---HH--HHHHTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCChhh-HHHHH---HH--HHHhhhHHHHHHHHHHHHH
Confidence 34557888889999999999999999988877643222 11111 11 1344556666666555554
No 120
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=53.42 E-value=39 Score=28.59 Aligned_cols=62 Identities=3% Similarity=-0.032 Sum_probs=44.9
Q ss_pred hhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 39 CSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 39 ~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
.-+..|..+|..|+|=+|-+.++.+-...|... . +....|..+...|++..|...+.+++..
T Consensus 27 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~----~--~~~~la~~~~~~g~~~~A~~~~~~al~~ 88 (537)
T 3fp2_A 27 QLKNRGNHFFTAKNFNEAIKYYQYAIELDPNEP----V--FYSNISACYISTGDLEKVIEFTTKALEI 88 (537)
T ss_dssp HHHHHHHHHHHTTCCC-CHHHHHHHHHHCTTCH----H--HHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhCCCCc----H--HHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 347789999999999999999999877665332 2 2233344456789999999999998754
No 121
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=52.19 E-value=24 Score=24.84 Aligned_cols=63 Identities=11% Similarity=-0.084 Sum_probs=46.0
Q ss_pred cchhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 047859 37 ENCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLG 105 (214)
Q Consensus 37 ~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~ 105 (214)
...-+.-|..++..|+|=+|-+.++.+-...|+.. ..+..+ |..+...|++..|...+++++.
T Consensus 51 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~----~~~~~l--a~~~~~~g~~~~A~~~~~~al~ 113 (121)
T 1hxi_A 51 EEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDI----AVHAAL--AVSHTNEHNANAALASLRAWLL 113 (121)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH----HHHHHH--HHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH----HHHHHH--HHHHHHcCCHHHHHHHHHHHHH
Confidence 44556778888889999999999998877766432 233333 4455677889999999998874
No 122
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=52.01 E-value=63 Score=23.15 Aligned_cols=65 Identities=14% Similarity=-0.021 Sum_probs=49.2
Q ss_pred cchhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 047859 37 ENCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKL 107 (214)
Q Consensus 37 ~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L 107 (214)
...-+..|..++..|+|=+|-+.++.+-...+.. ...+..+ |..+...|++..|...+++++..-
T Consensus 45 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~----~~~~~~l--g~~~~~~g~~~~A~~~~~~al~~~ 109 (164)
T 3sz7_A 45 PIYLSNRAAAYSASGQHEKAAEDAELATVVDPKY----SKAWSRL--GLARFDMADYKGAKEAYEKGIEAE 109 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC----HHHHHHH--HHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC----HHHHHHH--HHHHHHccCHHHHHHHHHHHHHhC
Confidence 3455677888999999999999999987776543 2333333 455677899999999999998653
No 123
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=51.32 E-value=61 Score=24.32 Aligned_cols=64 Identities=9% Similarity=-0.008 Sum_probs=48.5
Q ss_pred cchhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 37 ENCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 37 ~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
...-+.-|..++..|+|=+|-+.++.+=.-.|+... .+.. .|..+...|++..|...+++|+..
T Consensus 70 ~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~----~~~~--lg~~~~~lg~~~eA~~~~~~al~l 133 (151)
T 3gyz_A 70 VDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYT----PVFH--TGQCQLRLKAPLKAKECFELVIQH 133 (151)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCH----HHHH--HHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcH----HHHH--HHHHHHHcCCHHHHHHHHHHHHHh
Confidence 344556788899999999999999998887774322 2223 344556789999999999999864
No 124
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=50.80 E-value=18 Score=30.52 Aligned_cols=67 Identities=9% Similarity=-0.036 Sum_probs=47.0
Q ss_pred hHHHHHHHhccCCchhhhhhhHHhhccCCcch--------hhHHHH---HHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 40 SFDEAVALFNERAYYKCHDCLESLWYTAEEPT--------RTLIHG---VLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 40 ~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~e--------r~~lqG---LIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
-+..|..+|..|+|-+|-+.++.+-...+... +..... -+..-.|..+...|++..|...+.+|+..
T Consensus 182 ~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 259 (338)
T 2if4_A 182 RKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTE 259 (338)
T ss_dssp HHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 45667888889999999999998776655221 111111 13344566678899999999999999864
No 125
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=49.97 E-value=59 Score=24.51 Aligned_cols=63 Identities=10% Similarity=-0.032 Sum_probs=42.0
Q ss_pred chhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 38 NCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 38 ~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
..-+.-|..++..|+|=+|-+.++.+-...+... .+....|..+...|++..|...+++++..
T Consensus 78 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~------~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 140 (275)
T 1xnf_A 78 EVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYN------YAHLNRGIALYYGGRDKLAQDDLLAFYQD 140 (275)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT------HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhcCcccc------HHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 3445567777778888888888888776655321 12223344556788888888888888753
No 126
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=48.82 E-value=83 Score=25.05 Aligned_cols=65 Identities=15% Similarity=0.073 Sum_probs=46.2
Q ss_pred HHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 047859 43 EAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKL 107 (214)
Q Consensus 43 ~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L 107 (214)
.+..+++.|+|=+|-+.++.+=...+.....-.......+.|.++...|+...|...+.+|+...
T Consensus 81 ~i~~~~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~ 145 (293)
T 3u3w_A 81 QVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQ 145 (293)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHh
Confidence 47778899999999999988755443222211112233456778888999999999999999843
No 127
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=48.24 E-value=64 Score=24.43 Aligned_cols=67 Identities=10% Similarity=0.060 Sum_probs=43.3
Q ss_pred cchhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 37 ENCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 37 ~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
...-+.-|..++..|+|=+|-+.++.+-. .+..... .+.+....|..+...|++..|...+.+++..
T Consensus 37 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~~~~~--~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~ 103 (272)
T 3u4t_A 37 PYIYNRRAVCYYELAKYDLAQKDIETYFS-KVNATKA--KSADFEYYGKILMKKGQDSLAIQQYQAAVDR 103 (272)
T ss_dssp STTHHHHHHHHHHTTCHHHHHHHHHHHHT-TSCTTTC--CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHh-ccCchhH--HHHHHHHHHHHHHHcccHHHHHHHHHHHHhc
Confidence 33556677778888888888888888766 3322221 2222233455566778888888888888763
No 128
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=48.15 E-value=1e+02 Score=28.34 Aligned_cols=66 Identities=8% Similarity=-0.120 Sum_probs=43.9
Q ss_pred HHHHHhccCCchhhhhhhHHh---hccCCcc-hhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhc
Q 047859 43 EAVALFNERAYYKCHDCLESL---WYTAEEP-TRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRKM 110 (214)
Q Consensus 43 ~gi~LFN~G~YfEAHEVLEe~---Wk~~~g~-er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L~~~ 110 (214)
.+..+.++|+|=+|=+.++.. +...-|+ .-.....+-.+|. .....|++..|..++++++....+.
T Consensus 315 ~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~--~y~~~g~~~eA~~~~~~aL~i~~~~ 384 (490)
T 3n71_A 315 KIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASE--VLSYLQAYEEASHYARRMVDGYMKL 384 (490)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHH--HHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH--HHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 444566899999987766653 3322233 2334455544444 4456799999999999999887765
No 129
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=47.79 E-value=75 Score=22.81 Aligned_cols=59 Identities=5% Similarity=-0.030 Sum_probs=33.4
Q ss_pred HHHHHH-HhccCCc--hhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 047859 41 FDEAVA-LFNERAY--YKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLG 105 (214)
Q Consensus 41 l~~gi~-LFN~G~Y--fEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~ 105 (214)
+..|.. ++..|+| =+|-+.++.+-...+... .. ....|..+...|++..|...+.+++.
T Consensus 82 ~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~----~~--~~~la~~~~~~g~~~~A~~~~~~al~ 143 (177)
T 2e2e_A 82 AALATVLYYQASQHMTAQTRAMIDKALALDSNEI----TA--LMLLASDAFMQANYAQAIELWQKVMD 143 (177)
T ss_dssp HHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCH----HH--HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcH----HH--HHHHHHHHHHcccHHHHHHHHHHHHh
Confidence 344444 4456666 666666666665544321 11 12234455567778888777777764
No 130
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=47.64 E-value=33 Score=29.66 Aligned_cols=67 Identities=12% Similarity=0.026 Sum_probs=46.0
Q ss_pred hHHHHHHHhccCCchhhhhhhHHhhccCCcc----------hhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 40 SFDEAVALFNERAYYKCHDCLESLWYTAEEP----------TRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 40 ~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~----------er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
-...|..+|..|+|=+|-+.++.+-...+.. ...-....+....|..+...|++..|...+++|+..
T Consensus 226 ~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 302 (370)
T 1ihg_A 226 LKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEI 302 (370)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHh
Confidence 3467888999999999999998877632210 012223333344455567889999999999999853
No 131
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=47.58 E-value=44 Score=27.59 Aligned_cols=71 Identities=17% Similarity=0.098 Sum_probs=53.3
Q ss_pred hHHHHHHHhccCCchhhhhhhHHhhccCC-cchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhc
Q 047859 40 SFDEAVALFNERAYYKCHDCLESLWYTAE-EPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRKM 110 (214)
Q Consensus 40 ~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~-g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L~~~ 110 (214)
-+..+..++..|+|=.|.+.+...=...+ .+.....+|.+....|.+|...|++..|.+.+.++.......
T Consensus 178 ~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~~~~~ 249 (434)
T 4b4t_Q 178 HLLESKVYHKLRNLAKSKASLTAARTAANSIYCPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFESYHNL 249 (434)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhh
Confidence 34455566668888888888877544333 233446788899999999999999999999999998766544
No 132
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=47.46 E-value=13 Score=27.43 Aligned_cols=61 Identities=10% Similarity=-0.045 Sum_probs=44.7
Q ss_pred chhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 047859 38 NCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGL 104 (214)
Q Consensus 38 ~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl 104 (214)
+..+..|..++..|+|=+|-+.++.+-...|+.. ..+..+ |......|++..|...+++++
T Consensus 7 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~----~a~~~l--a~~~~~~g~~~~A~~~~~~a~ 67 (176)
T 2r5s_A 7 EQLLKQVSELLQQGEHAQALNVIQTLSDELQSRG----DVKLAK--ADCLLETKQFELAQELLATIP 67 (176)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHTSCHHHHTSH----HHHHHH--HHHHHHTTCHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcH----HHHHHH--HHHHHHCCCHHHHHHHHHHhh
Confidence 4578899999999999999999998877655332 222222 334567899999998888764
No 133
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=47.32 E-value=50 Score=26.27 Aligned_cols=28 Identities=18% Similarity=0.287 Sum_probs=20.8
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 79 LQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 79 IQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
+....|..+...|++..|...+.+++..
T Consensus 219 ~~~~l~~~~~~~g~~~~A~~~~~~al~~ 246 (368)
T 1fch_A 219 VQCGLGVLFNLSGEYDKAVDCFTAALSV 246 (368)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 3444566677788999999988888764
No 134
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=47.07 E-value=35 Score=23.93 Aligned_cols=46 Identities=11% Similarity=-0.116 Sum_probs=22.7
Q ss_pred chhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 047859 53 YYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGL 104 (214)
Q Consensus 53 YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl 104 (214)
.-+|-..|+..=...|... ++++.+ |..+.+.|+++.|...+++.+
T Consensus 25 ~~~A~~~l~~AL~~dp~~~----rA~~~l--g~~~~~~g~y~~Ai~~w~~~l 70 (93)
T 3bee_A 25 TDEVSLLLEQALQLEPYNE----AALSLI--ANDHFISFRFQEAIDTWVLLL 70 (93)
T ss_dssp CHHHHHHHHHHHHHCTTCH----HHHHHH--HHHHHHTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCcCCH----HHHHHH--HHHHHHcCCHHHHHHHHHHHH
Confidence 4556665555555444322 222222 334445666666666666554
No 135
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=46.84 E-value=63 Score=23.20 Aligned_cols=65 Identities=8% Similarity=-0.125 Sum_probs=44.4
Q ss_pred cchhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCH--HHHHHHHHHHHHH
Q 047859 37 ENCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNH--KGAMMELGEGLGK 106 (214)
Q Consensus 37 ~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~--~GA~~Ll~rAl~~ 106 (214)
...-+.-|..++..|+|=+|=+.++.+-...+.. ...+..+|.. .....|++ ..|...+.+++..
T Consensus 44 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~----~~~~~~la~~-l~~~~~~~~~~~A~~~~~~al~~ 110 (177)
T 2e2e_A 44 SEQWALLGEYYLWQNDYSNSLLAYRQALQLRGEN----AELYAALATV-LYYQASQHMTAQTRAMIDKALAL 110 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSC----HHHHHHHHHH-HHHHTTTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC----HHHHHHHHHH-HHHhcCCcchHHHHHHHHHHHHh
Confidence 3455667788888999999999998887766533 1222333332 14566787 8999999988764
No 136
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=45.14 E-value=65 Score=26.55 Aligned_cols=70 Identities=7% Similarity=-0.056 Sum_probs=49.0
Q ss_pred HHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhc
Q 047859 41 FDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRKM 110 (214)
Q Consensus 41 l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L~~~ 110 (214)
..-|..++..|+|-+|-+.++.+=.............-+.+-.+-.+...||+..|...+++|+......
T Consensus 139 ~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~ 208 (434)
T 4b4t_Q 139 IKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSI 208 (434)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcC
Confidence 4557778889999999999988755544211112233344445556778899999999999998776554
No 137
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=44.84 E-value=80 Score=25.96 Aligned_cols=61 Identities=15% Similarity=0.024 Sum_probs=41.7
Q ss_pred HHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 44 AVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 44 gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
|..++..|+|=+|-+.++.+-...+.... +..-+....|..+.+.|++..|...+.+++..
T Consensus 264 ~~~~~~~g~~~~A~~~~~~~l~~~p~~~~--~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 324 (450)
T 2y4t_A 264 AEELIRDGRYTDATSKYESVMKTEPSIAE--YTVRSKERICHCFSKDEKPVEAIRVCSEVLQM 324 (450)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCCSSHH--HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHhcCCcchH--HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 77788888888888888887776554322 22223333455566778888888888888754
No 138
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=43.90 E-value=95 Score=26.15 Aligned_cols=68 Identities=4% Similarity=-0.093 Sum_probs=48.9
Q ss_pred cchhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhc
Q 047859 37 ENCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRKM 110 (214)
Q Consensus 37 ~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L~~~ 110 (214)
...-+.-|..++..|+|=+|-+.++.+....+.... . ....|..+...|++..|...+.+++..-...
T Consensus 344 ~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~-~-----~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~ 411 (537)
T 3fp2_A 344 VYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPE-V-----PTFFAEILTDRGDFDTAIKQYDIAKRLEEVQ 411 (537)
T ss_dssp SHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTH-H-----HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChH-H-----HHHHHHHHHHhCCHHHHHHHHHHHHHcCCcc
Confidence 344566777788889999999988888777653321 2 2233666778899999999999998765443
No 139
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=43.84 E-value=70 Score=28.33 Aligned_cols=60 Identities=8% Similarity=-0.148 Sum_probs=30.6
Q ss_pred HHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 41 FDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 41 l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
+.-|..++..|+|=+|-+.++.+-...+.. ...+ ...|..+...|++..|...+++++..
T Consensus 61 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~----~~~~--~~la~~~~~~g~~~~A~~~~~~al~~ 120 (568)
T 2vsy_A 61 ARLGRVRWTQQRHAEAAVLLQQASDAAPEH----PGIA--LWLGHALEDAGQAEAAAAAYTRAHQL 120 (568)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTC----HHHH--HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHhcCCCC----HHHH--HHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 344445555555555555555554443322 1111 22234455666777777777766644
No 140
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=43.44 E-value=52 Score=28.98 Aligned_cols=64 Identities=13% Similarity=-0.036 Sum_probs=47.0
Q ss_pred CcchhHHHHHHHhccCCc-hhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 047859 36 GENCSFDEAVALFNERAY-YKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLG 105 (214)
Q Consensus 36 e~~~~l~~gi~LFN~G~Y-fEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~ 105 (214)
....-+..|..++..|+| =+|-+.++.+-...+... .++ ...|..+...|++..|...+++|+.
T Consensus 101 ~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~----~a~--~~lg~~~~~~g~~~~A~~~~~~al~ 165 (474)
T 4abn_A 101 EAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELV----EAW--NQLGEVYWKKGDVTSAHTCFSGALT 165 (474)
T ss_dssp CHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTCH----HHH--HHHHHHHHHHTCHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCCH----HHH--HHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 445567788888999999 999999999887766432 122 2334556677999999999888864
No 141
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=43.05 E-value=98 Score=24.58 Aligned_cols=88 Identities=14% Similarity=0.043 Sum_probs=59.9
Q ss_pred hhHHHHHHHhccCCchhhhhhhHHhhcc-------CCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhcc
Q 047859 39 CSFDEAVALFNERAYYKCHDCLESLWYT-------AEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRKMN 111 (214)
Q Consensus 39 ~~l~~gi~LFN~G~YfEAHEVLEe~Wk~-------~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L~~~~ 111 (214)
.-...|..+.+-|+|=||-+.++..=.- .|+..+.+++++...++++. ..|++..|..-+++|++.--.-
T Consensus 59 a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~--~lgr~eEAl~~y~kAlel~p~d- 135 (159)
T 2hr2_A 59 CHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALD--GLGRGAEAMPEFKKVVEMIEER- 135 (159)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHH--HCCCHHHHHHHHHHHHhcCCCc-
Confidence 3456788888899999999888876655 55555555666688887765 4588999999999999764322
Q ss_pred CCCCCCcccccCHHHHHHHHHHhh
Q 047859 112 LRSGPFHEFENEISAALEFIYRTQ 135 (214)
Q Consensus 112 ~~~~p~~~~GvDV~aLl~~i~~l~ 135 (214)
.. ---.+..+...+.+..
T Consensus 136 ----~~--~~~~~~~~~~~~~~~~ 153 (159)
T 2hr2_A 136 ----KG--ETPGKERMMEVAIDRI 153 (159)
T ss_dssp ----CS--CCTTHHHHHHHHHHHH
T ss_pred ----HH--HHHHHHHHHHHHHHHH
Confidence 11 2234455555554443
No 142
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=42.94 E-value=91 Score=25.15 Aligned_cols=62 Identities=16% Similarity=0.116 Sum_probs=46.2
Q ss_pred chhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 047859 38 NCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLG 105 (214)
Q Consensus 38 ~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~ 105 (214)
..-+..|..+|..|+|=+|-+.++.+....+... .+....|..+...|++..|...+++|+.
T Consensus 5 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~------~~~~~la~~~~~~~~~~~A~~~~~~al~ 66 (281)
T 2c2l_A 5 QELKEQGNRLFVGRKYPEAAACYGRAITRNPLVA------VYYTNRALCYLKMQQPEQALADCRRALE 66 (281)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCH------HHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccH------HHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 3456789999999999999999999998766432 1223345556678888888888887654
No 143
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=42.84 E-value=27 Score=28.33 Aligned_cols=62 Identities=15% Similarity=0.093 Sum_probs=46.8
Q ss_pred cchhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 047859 37 ENCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGL 104 (214)
Q Consensus 37 ~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl 104 (214)
.+..+..|..++..|++=+|-+.++.+-...|+.. ..+.+| |....+.|++..|...+++++
T Consensus 117 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~-~a~~~l-----a~~~~~~g~~~~A~~~l~~~~ 178 (287)
T 3qou_A 117 EELXAQQAMQLMQESNYTDALPLLXDAWQLSNQNG-EIGLLL-----AETLIALNRSEDAEAVLXTIP 178 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCH-HHHHHH-----HHHHHHTTCHHHHHHHHTTSC
T ss_pred hhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcch-hHHHHH-----HHHHHHCCCHHHHHHHHHhCc
Confidence 35567889999999999999999999988877543 223333 345567789988888888764
No 144
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=42.79 E-value=1e+02 Score=23.53 Aligned_cols=61 Identities=8% Similarity=-0.159 Sum_probs=37.6
Q ss_pred HHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 047859 41 FDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGL 104 (214)
Q Consensus 41 l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl 104 (214)
+..|..++..|+|-+|-+.++.+-...|+... ..-...-.|..+...|+...|...++++.
T Consensus 151 ~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~---~~~a~~~l~~~~~~~g~~~~A~~~~~~l~ 211 (225)
T 2yhc_A 151 YSVAEYYTERGAWVAVVNRVEGMLRDYPDTQA---TRDALPLMENAYRQMQMNAQAEKVAKIIA 211 (225)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHH---HHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCc---cHHHHHHHHHHHHHcCCcHHHHHHHHHHH
Confidence 44566677788888888888877776653221 11122333445566788888877776543
No 145
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=42.78 E-value=50 Score=26.56 Aligned_cols=64 Identities=13% Similarity=-0.010 Sum_probs=39.8
Q ss_pred HHHHhcc-CCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 047859 44 AVALFNE-RAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKL 107 (214)
Q Consensus 44 gi~LFN~-G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L 107 (214)
|..+.+. |+|=+|-+.++..-.-.++.......+-+..-.|..+.+.|++..|...+++++..-
T Consensus 124 g~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 188 (292)
T 1qqe_A 124 GEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSS 188 (292)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 3344444 777777777776554433221112223333445667788999999999999998653
No 146
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=41.48 E-value=19 Score=30.15 Aligned_cols=61 Identities=8% Similarity=0.051 Sum_probs=29.8
Q ss_pred hHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 40 SFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 40 ~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
-+..|..++..|+|=+|-+.++.+-...+.... +....|..+...|++..|...+.+++..
T Consensus 341 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~------~~~~la~~~~~~~~~~~A~~~~~~a~~~ 401 (514)
T 2gw1_A 341 YIQLACLAYRENKFDDCETLFSEAKRKFPEAPE------VPNFFAEILTDKNDFDKALKQYDLAIEL 401 (514)
T ss_dssp HHHHHHHTTTTTCHHHHHHHHHHHHHHSTTCSH------HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHcccCHH------HHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 344455555566666666666665554432211 1122233444555555555555555544
No 147
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=39.56 E-value=90 Score=27.59 Aligned_cols=65 Identities=6% Similarity=-0.163 Sum_probs=46.2
Q ss_pred cchhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHH
Q 047859 37 ENCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFN---QNHKGAMMELGEGLGKL 107 (214)
Q Consensus 37 ~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~r---GN~~GA~~Ll~rAl~~L 107 (214)
...-+.-|..++..|+|=+|-+.++.+-...+... ..+..++ ..+... |+...|...+++++..-
T Consensus 91 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~----~~~~~l~--~~~~~~~~~g~~~~A~~~~~~al~~~ 158 (568)
T 2vsy_A 91 PGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEP----YITAQLL--NWRRRLCDWRALDVLSAQVRAAVAQG 158 (568)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH----HHHHHHH--HHHHHTTCCTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH----HHHHHHH--HHHHHhhccccHHHHHHHHHHHHhcC
Confidence 44556677788889999999999998887765432 2333333 344556 89999999999998654
No 148
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=38.87 E-value=73 Score=25.38 Aligned_cols=66 Identities=23% Similarity=0.146 Sum_probs=51.0
Q ss_pred CCcchhHHHHHHHhccC---CchhhhhhhHHhhccC-CcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 047859 35 DGENCSFDEAVALFNER---AYYKCHDCLESLWYTA-EEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLG 105 (214)
Q Consensus 35 ~e~~~~l~~gi~LFN~G---~YfEAHEVLEe~Wk~~-~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~ 105 (214)
...+-.|..|+.|-+.. ++-++=..||++=+.. |...|++ +-.+|+|. .+.||+.-|++.+.++++
T Consensus 30 ~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~---lY~LAv~~--~kl~~Y~~A~~y~~~lL~ 99 (152)
T 1pc2_A 30 VSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDY---VFYLAVGN--YRLKEYEKALKYVRGLLQ 99 (152)
T ss_dssp CCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHH---HHHHHHHH--HHTSCHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHH---HHHHHHHH--HHccCHHHHHHHHHHHHh
Confidence 35677889999999866 8889999999988876 3334554 35667665 788999999999998875
No 149
>3iqc_A FLIS, flagellar protein; chaperone, flagellum; 2.70A {Helicobacter pylori} SCOP: a.24.19.0 PDB: 3k1i_A
Probab=38.66 E-value=1.1e+02 Score=23.61 Aligned_cols=37 Identities=11% Similarity=0.175 Sum_probs=33.0
Q ss_pred HHHHHHH-HHHHHHHHhcCCHHHHHHHHHHHHHHHhhc
Q 047859 74 LIHGVLQ-CAVGFYHLFNQNHKGAMMELGEGLGKLRKM 110 (214)
Q Consensus 74 ~lqGLIQ-lAvAl~H~~rGN~~GA~~Ll~rAl~~L~~~ 110 (214)
++.|+|. +..|..+..+|+.......+.||...+..+
T Consensus 32 Lydgal~~l~~A~~ai~~~d~~~k~~~i~KA~~Ii~~L 69 (131)
T 3iqc_A 32 LYEGILRFSSQAKRCIENEDIEKKIYYINRVTDIFTEL 69 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 6778887 788888999999999999999999998876
No 150
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=37.94 E-value=1e+02 Score=25.69 Aligned_cols=62 Identities=13% Similarity=0.093 Sum_probs=45.9
Q ss_pred hhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 39 CSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 39 ~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
.-+..|..++..|+|-+|-+.++.+-...+.. ..++..+ |..+...|++..|...+++|+..
T Consensus 198 ~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~----~~a~~~l--g~~~~~~g~~~~A~~~~~~al~l 259 (336)
T 1p5q_A 198 SHLNLAMCHLKLQAFSAAIESCNKALELDSNN----EKGLSRR--GEAHLAVNDFELARADFQKVLQL 259 (336)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC----HHHHHHH--HHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc----HHHHHHH--HHHHHHCCCHHHHHHHHHHHHHH
Confidence 44556777788999999999999887766543 2344444 44556789999999999999864
No 151
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=37.88 E-value=54 Score=27.54 Aligned_cols=59 Identities=8% Similarity=0.025 Sum_probs=43.1
Q ss_pred HHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 047859 41 FDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLG 105 (214)
Q Consensus 41 l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~ 105 (214)
+..|..++..|+|-+|-+.++.+-...+.. ..++..+|. .+...|++..|...+++|+.
T Consensus 234 ~nla~~~~~~g~~~~A~~~~~~al~~~p~~----~~a~~~lg~--a~~~~g~~~~A~~~l~~al~ 292 (338)
T 2if4_A 234 LNIAACLIKLKRYDEAIGHCNIVLTEEEKN----PKALFRRGK--AKAELGQMDSARDDFRKAQK 292 (338)
T ss_dssp HHHHHHHHTTTCCHHHHHHHHHHHHHCTTC----HHHHHHHHH--HHHTTTCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCC----HHHHHHHHH--HHHHcCCHHHHHHHHHHHHH
Confidence 455677777899999999998887765533 334444444 45678999999999998874
No 152
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=35.71 E-value=1.9e+02 Score=25.96 Aligned_cols=64 Identities=14% Similarity=0.008 Sum_probs=41.6
Q ss_pred HHHhccCCchhhhhhhHHh---hccCCcch-hhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhc
Q 047859 45 VALFNERAYYKCHDCLESL---WYTAEEPT-RTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRKM 110 (214)
Q Consensus 45 i~LFN~G~YfEAHEVLEe~---Wk~~~g~e-r~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L~~~ 110 (214)
...-+.|+|-||=+.+|.. +...-|++ -.....+-.+|.+ ....|++..|..++++++....+.
T Consensus 306 ~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~--y~~~g~~~eA~~~~~~aL~i~~~~ 373 (433)
T 3qww_A 306 RRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGV--CLYMQDWEGALKYGQKIIKPYSKH 373 (433)
T ss_dssp HHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHH--HHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHH--HHhhcCHHHHHHHHHHHHHHHHHH
Confidence 3344577888887777653 22222332 3344444444444 456799999999999999988775
No 153
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=35.68 E-value=44 Score=27.94 Aligned_cols=65 Identities=9% Similarity=-0.035 Sum_probs=44.6
Q ss_pred HHHHHHhccCCchhhhhhhHHhhccCC---cc-hhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 42 DEAVALFNERAYYKCHDCLESLWYTAE---EP-TRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 42 ~~gi~LFN~G~YfEAHEVLEe~Wk~~~---g~-er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
.-|..+++.|+|-+|-+.++.+-.-.+ ++ ....-......+.++.+..++|+..|...+++|+..
T Consensus 99 nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~ 167 (472)
T 4g1t_A 99 NYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEK 167 (472)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHh
Confidence 357778889999999888776543222 11 112233445566677778888999999999999853
No 154
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=35.45 E-value=89 Score=29.10 Aligned_cols=65 Identities=17% Similarity=0.023 Sum_probs=47.8
Q ss_pred CcchhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 36 GENCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 36 e~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
.....+..|..++..|+|=+|-+.++.+=...++.. .++. .-|..+...|++..|...+++|+..
T Consensus 432 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~----~a~~--~lg~~~~~~g~~~~A~~~~~~al~l 496 (681)
T 2pzi_A 432 SVELPLMEVRALLDLGDVAKATRKLDDLAERVGWRW----RLVW--YRAVAELLTGDYDSATKHFTEVLDT 496 (681)
T ss_dssp CSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCH----HHHH--HHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchH----HHHH--HHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 445667778889999999999999998777655432 2222 2344456789999999999999864
No 155
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=34.78 E-value=1e+02 Score=20.66 Aligned_cols=87 Identities=10% Similarity=0.119 Sum_probs=56.7
Q ss_pred cchhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhccCCCCC
Q 047859 37 ENCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRKMNLRSGP 116 (214)
Q Consensus 37 ~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L~~~~~~~~p 116 (214)
...-+..|..++..|+|=+|-+.++.+=...+.. ...+. ..|..+...|++..|...+++++..-... +
T Consensus 43 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~----~~~~~--~l~~~~~~~~~~~~A~~~~~~a~~~~p~~-----~ 111 (137)
T 3q49_B 43 AVYYTNRALCYLKMQQPEQALADCRRALELDGQS----VKAHF--FLGQCQLEMESYDEAIANLQRAYSLAKEQ-----R 111 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC----HHHHH--HHHHHHHHTTCHHHHHHHHHHHHHHHHHT-----T
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchh----HHHHH--HHHHHHHHHhhHHHHHHHHHHHHHHChhH-----H
Confidence 3455677888889999999999988865554432 22333 34455667899999999999998765432 1
Q ss_pred CcccccCHHHHHHHHHHhh
Q 047859 117 FHEFENEISAALEFIYRTQ 135 (214)
Q Consensus 117 ~~~~GvDV~aLl~~i~~l~ 135 (214)
. .+..++...+..+....
T Consensus 112 ~-~~~~~~~~~l~~~~~~~ 129 (137)
T 3q49_B 112 L-NFGDDIPSALRIAKKKR 129 (137)
T ss_dssp C-CCTTHHHHHHHHHHHHH
T ss_pred H-HHHHHHHHHHHHHHHHH
Confidence 1 23445555555554443
No 156
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=34.00 E-value=1.3e+02 Score=25.88 Aligned_cols=60 Identities=17% Similarity=0.098 Sum_probs=43.7
Q ss_pred HHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 41 FDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 41 l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
..-|..++..|+|=+|-++++.+-...+.. ...|. ..|......|++..|...+++++..
T Consensus 520 ~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~-~~~~~-----~l~~~~~~~g~~~~A~~~~~~~l~~ 579 (597)
T 2xpi_A 520 ANLGHAYRKLKMYDAAIDALNQGLLLSTND-ANVHT-----AIALVYLHKKIPGLAITHLHESLAI 579 (597)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSSCC-HHHHH-----HHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhCCCC-hHHHH-----HHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 445666777999999999999987765532 22333 3344567789999999999998863
No 157
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=32.92 E-value=1.8e+02 Score=23.53 Aligned_cols=26 Identities=8% Similarity=-0.102 Sum_probs=13.5
Q ss_pred HHHHHHHhccCCchhhhhhhHHhhcc
Q 047859 41 FDEAVALFNERAYYKCHDCLESLWYT 66 (214)
Q Consensus 41 l~~gi~LFN~G~YfEAHEVLEe~Wk~ 66 (214)
+..|..+...|++=+|-+.++.+=..
T Consensus 134 ~~l~~~~~~~g~~~~A~~~l~~~~~~ 159 (291)
T 3mkr_A 134 AMTVQILLKLDRLDLARKELKKMQDQ 159 (291)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHhh
Confidence 33444444556666666555555443
No 158
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=32.74 E-value=1.6e+02 Score=25.30 Aligned_cols=60 Identities=8% Similarity=0.003 Sum_probs=44.6
Q ss_pred HHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 41 FDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 41 l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
+..|..++..|+|-+|-+.++.+-...+.. ..++..+|.+ +...|++..|...+++|+..
T Consensus 277 ~nla~~~~~~g~~~~A~~~~~~al~~~p~~----~~a~~~lg~~--~~~~g~~~eA~~~l~~Al~l 336 (370)
T 1ihg_A 277 LNIGACKLKMSDWQGAVDSCLEALEIDPSN----TKALYRRAQG--WQGLKEYDQALADLKKAQEI 336 (370)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTCTTC----HHHHHHHHHH--HHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCHHHHHHHHHHHHHhCchh----HHHHHHHHHH--HHHccCHHHHHHHHHHHHHh
Confidence 446677788999999999999888765533 3444445444 45679999999999999864
No 159
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=31.99 E-value=1.3e+02 Score=20.90 Aligned_cols=42 Identities=17% Similarity=0.011 Sum_probs=31.8
Q ss_pred CcchhHHHHHHHhccCCchhhhhhhHHhhccCC-cchhhHHHH
Q 047859 36 GENCSFDEAVALFNERAYYKCHDCLESLWYTAE-EPTRTLIHG 77 (214)
Q Consensus 36 e~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~-g~er~~lqG 77 (214)
+....+..|...|..|+|=+|-+.|+.+=...+ .+.+..++.
T Consensus 42 ~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~~~~~i~~ 84 (93)
T 3bee_A 42 NEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNLDRVTIIE 84 (93)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTCCHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHH
Confidence 567778889999999999999999999887766 334333333
No 160
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=31.68 E-value=1.6e+02 Score=22.54 Aligned_cols=59 Identities=12% Similarity=0.135 Sum_probs=29.4
Q ss_pred hhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHH
Q 047859 39 CSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLF----NQNHKGAMMELGEGLG 105 (214)
Q Consensus 39 ~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~----rGN~~GA~~Ll~rAl~ 105 (214)
.-+..|..+++.|+|=+|-+.++..=. +++. .++.. .|..+.. .|+...|...+.+|+.
T Consensus 8 a~~~lg~~~~~~~~~~~A~~~~~~a~~--~~~~----~a~~~--lg~~~~~g~~~~~~~~~A~~~~~~a~~ 70 (273)
T 1ouv_A 8 ELVGLGAKSYKEKDFTQAKKYFEKACD--LKEN----SGCFN--LGVLYYQGQGVEKNLKKAASFYAKACD 70 (273)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH--TTCH----HHHHH--HHHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHH--CCCH----HHHHH--HHHHHHcCCCcCCCHHHHHHHHHHHHH
Confidence 345556666666666666666655433 1111 12222 2233334 5566666666665543
No 161
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=31.62 E-value=1.6e+02 Score=23.82 Aligned_cols=60 Identities=8% Similarity=-0.114 Sum_probs=38.5
Q ss_pred HHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 41 FDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 41 l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
..-|..++..|+|=+|-+.++.+-...+.... . ....|..+...|++..|...+++++..
T Consensus 241 ~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~-~-----~~~l~~~~~~~g~~~~A~~~~~~al~~ 300 (388)
T 1w3b_A 241 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPD-A-----YCNLANALKEKGSVAEAEDCYNTALRL 300 (388)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHH-H-----HHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHH-H-----HHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 34556666677777777777777665443211 1 223344556778888888888888754
No 162
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=31.55 E-value=1.1e+02 Score=20.24 Aligned_cols=45 Identities=16% Similarity=0.155 Sum_probs=29.5
Q ss_pred hhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 56 CHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 56 AHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
+-+.++.+....+... . +....|......|++..|...+++++..
T Consensus 4 a~~~~~~al~~~p~~~----~--~~~~lg~~~~~~g~~~~A~~~~~~al~~ 48 (115)
T 2kat_A 4 ITERLEAMLAQGTDNM----L--LRFTLGKTYAEHEQFDAALPHLRAALDF 48 (115)
T ss_dssp HHHHHHHHHTTTCCCH----H--HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcH----H--HHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 3455566655554322 1 2334455667899999999999999864
No 163
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=31.07 E-value=1.5e+02 Score=23.91 Aligned_cols=28 Identities=11% Similarity=-0.024 Sum_probs=12.4
Q ss_pred HHHHHHHhccCCchhhhhhhHHhhccCC
Q 047859 41 FDEAVALFNERAYYKCHDCLESLWYTAE 68 (214)
Q Consensus 41 l~~gi~LFN~G~YfEAHEVLEe~Wk~~~ 68 (214)
+..++.+...+++=+|-+.++..-...|
T Consensus 189 ~~~~~~l~~~~~~~~a~~~l~~al~~~P 216 (287)
T 3qou_A 189 LVAQIELLXQAADTPEIQQLQQQVAENP 216 (287)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHHHHHCT
T ss_pred HHHHHHHHhhcccCccHHHHHHHHhcCC
Confidence 3334444444444444444444444433
No 164
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=30.92 E-value=47 Score=29.65 Aligned_cols=63 Identities=10% Similarity=0.007 Sum_probs=39.9
Q ss_pred chhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 38 NCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 38 ~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
..-+..|..++..|+|=+|-+.++.+-...+.. ...+..+|. .+...|++..|...+++|+..
T Consensus 41 ~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~----~~~~~~lg~--~~~~~g~~~eA~~~~~~al~~ 103 (477)
T 1wao_1 41 IYYGNRSLAYLRTECYGYALGDATRAIELDKKY----IKGYYRRAA--SNMALGKFRAALRDYETVVKV 103 (477)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTC----HHHHHHHHH--HHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC----HHHHHHHHH--HHHHcCCHHHHHHHHHHHHHh
Confidence 334455666777788877777777766654432 233344433 445668888888888888754
No 165
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=30.65 E-value=43 Score=27.36 Aligned_cols=70 Identities=7% Similarity=0.025 Sum_probs=45.7
Q ss_pred hHHHHHHHhccCCchhhhhhhHHhhccCCc----chhhHHHHHHHHHH--------------------HHH-HHhcCCHH
Q 047859 40 SFDEAVALFNERAYYKCHDCLESLWYTAEE----PTRTLIHGVLQCAV--------------------GFY-HLFNQNHK 94 (214)
Q Consensus 40 ~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g----~er~~lqGLIQlAv--------------------Al~-H~~rGN~~ 94 (214)
.|-.|...+-+++|-+||+.|..+|+.++. ..+..+.-||-+.. -+. -.++||..
T Consensus 17 ~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~iP~~~ll~~~~~~~y~~L~~Avr~Gdl~ 96 (203)
T 3t5x_A 17 KYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPTVELLKKYHLMQFAEVTRAVSEGNLL 96 (203)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCEECHHHHHHTTCGGGHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCCCCHHHhhhCchhHHHHHHHHHHhCCHH
Confidence 456677788899999999999999999882 33444555531111 111 35678877
Q ss_pred HHHHHHHHHHHHHhh
Q 047859 95 GAMMELGEGLGKLRK 109 (214)
Q Consensus 95 GA~~Ll~rAl~~L~~ 109 (214)
+....+++-...+.+
T Consensus 97 ~f~~~l~~~~~~f~~ 111 (203)
T 3t5x_A 97 LLHEALAKHEAFFIR 111 (203)
T ss_dssp HHHHHHHHTHHHHHH
T ss_pred HHHHHHHHhHHHHHH
Confidence 776666665544443
No 166
>2ftc_B Mitochondrial ribosomal protein L2; mitochondrial ribosome, large ribosomal subunit, ribosomal R ribosome; 12.10A {Bos taurus} PDB: 3iy9_B
Probab=28.73 E-value=36 Score=27.03 Aligned_cols=45 Identities=16% Similarity=0.191 Sum_probs=32.6
Q ss_pred hhhcccccCceeeeccCCCCceEEEEcCCCCCC---CCCCCceeeccc
Q 047859 158 LLGDYAAGQQLYHLESDHNQIMYIVFDPQRSYG---SDDKSIKVKLPT 202 (214)
Q Consensus 158 ~Lg~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~klp~ 202 (214)
.|++.|.|-.++.+|..|..+-.++=|+..+-. ....-.+||||.
T Consensus 58 pL~~iP~Gt~IhNIE~~pG~gg~laRsAGt~a~ii~ke~~~~~vrLPS 105 (136)
T 2ftc_B 58 PLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLLRKVNGTAIIQLPS 105 (136)
T ss_pred EecccCCCCEEEEEeccCCCCcEEEEeCCCeEEEEEecCCEEEEECCC
Confidence 588999999999999988777777766665422 122235889985
No 167
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=28.03 E-value=2e+02 Score=21.83 Aligned_cols=62 Identities=11% Similarity=0.018 Sum_probs=39.2
Q ss_pred chhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 38 NCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 38 ~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
..-+..|..++..|+|=+|=+.++.+-... + .. .. ...-|......|++..|...+++++..
T Consensus 119 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~-~~---~~--~~~la~~~~~~g~~~~A~~~~~~al~~ 180 (217)
T 2pl2_A 119 PLHLQRGLVYALLGERDKAEASLKQALALE-D-TP---EI--RSALAELYLSMGRLDEALAQYAKALEQ 180 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-C-CH---HH--HHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHhcc-c-ch---HH--HHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 344556677777778777777777766554 1 11 11 223344556678888888888888753
No 168
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=27.39 E-value=1.1e+02 Score=18.78 Aligned_cols=27 Identities=11% Similarity=-0.053 Sum_probs=21.5
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 80 QCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 80 QlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
....|..+...|++..|...+++++..
T Consensus 12 ~~~la~~~~~~~~~~~A~~~~~~a~~~ 38 (91)
T 1na3_A 12 WYNLGNAYYKQGDYDEAIEYYQKALEL 38 (91)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhc
Confidence 344566677899999999999999864
No 169
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=27.10 E-value=1.9e+02 Score=25.23 Aligned_cols=23 Identities=9% Similarity=0.030 Sum_probs=19.2
Q ss_pred HHhcCCHHHHHHHHHHHHHHHhh
Q 047859 87 HLFNQNHKGAMMELGEGLGKLRK 109 (214)
Q Consensus 87 H~~rGN~~GA~~Ll~rAl~~L~~ 109 (214)
+.+.|+...|.+.|++....|..
T Consensus 215 l~~~Gr~~~Al~~y~~~r~~L~~ 237 (388)
T 2ff4_A 215 YYLSDRQSDALGAYRRVKTTLAD 237 (388)
T ss_dssp HHTTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHHHHH
Confidence 36789999999999999888864
No 170
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=26.73 E-value=1.1e+02 Score=26.36 Aligned_cols=19 Identities=21% Similarity=0.030 Sum_probs=10.7
Q ss_pred HHhcCCHHHHHHHHHHHHH
Q 047859 87 HLFNQNHKGAMMELGEGLG 105 (214)
Q Consensus 87 H~~rGN~~GA~~Ll~rAl~ 105 (214)
..+.|++..|...+++++.
T Consensus 526 ~~~~g~~~~A~~~~~~~~~ 544 (597)
T 2xpi_A 526 YRKLKMYDAAIDALNQGLL 544 (597)
T ss_dssp HHHTTCHHHHHHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHH
Confidence 3445666666666665553
No 171
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=26.25 E-value=1.8e+02 Score=26.06 Aligned_cols=68 Identities=13% Similarity=-0.117 Sum_probs=46.7
Q ss_pred HHHHHHhccCCchhhhhhhHHhhccCCc-chhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhc
Q 047859 42 DEAVALFNERAYYKCHDCLESLWYTAEE-PTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRKM 110 (214)
Q Consensus 42 ~~gi~LFN~G~YfEAHEVLEe~Wk~~~g-~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L~~~ 110 (214)
.-+--++..|+|-+|-++|.++-.+..+ ..+....- +++--.-.+...+|+.-|...++++..+....
T Consensus 142 ~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve-~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~ 210 (445)
T 4b4t_P 142 DLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQ-FILEQMELSILKGDYSQATVLSRKILKKTFKN 210 (445)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHH-HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHH-HHHHHHHHHHHCCCHHHHHHHHHHHHHhhccc
Confidence 3456677799999999999999987764 22222222 22223334556789999999999997765543
No 172
>1vh6_A Flagellar protein FLIS; structural genomics, unknown function; HET: MSE; 2.50A {Bacillus subtilis} SCOP: a.24.19.1
Probab=26.24 E-value=1.2e+02 Score=23.95 Aligned_cols=62 Identities=16% Similarity=0.263 Sum_probs=42.9
Q ss_pred HHHHHHH-HHHHHHHHhcCCHHHHHHHHHHHHHHHhhccCCCCCCcccccCHHHHHHHHHHhh
Q 047859 74 LIHGVLQ-CAVGFYHLFNQNHKGAMMELGEGLGKLRKMNLRSGPFHEFENEISAALEFIYRTQ 135 (214)
Q Consensus 74 ~lqGLIQ-lAvAl~H~~rGN~~GA~~Ll~rAl~~L~~~~~~~~p~~~~GvDV~aLl~~i~~l~ 135 (214)
++.|+|. +..|..+..+||...+...+.||...+..+...-........++..|=.|+.++.
T Consensus 29 Lydgal~~l~~A~~aie~~d~~~k~~~i~KA~~Ii~eL~~sLd~egeiA~nL~~LY~y~~~~L 91 (145)
T 1vh6_A 29 LYNGCLKFIRLAAQAIENDDMERKNENLIKAQNIIQELNFTLNRNIELSASMGAMYDYMYRRL 91 (145)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHH
Confidence 7788887 7788889999999999999999999987653100000124455556666665554
No 173
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=26.13 E-value=1.5e+02 Score=26.05 Aligned_cols=60 Identities=15% Similarity=0.204 Sum_probs=43.6
Q ss_pred HHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 41 FDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 41 l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
+..|..++..|+|-+|-+.++.+-...+.. ..++..+|. .+...|++..|...+.+|+..
T Consensus 321 ~nla~~~~~~g~~~~A~~~~~~al~~~p~~----~~a~~~~g~--a~~~~g~~~~A~~~~~~al~l 380 (457)
T 1kt0_A 321 LNLAMCYLKLREYTKAVECCDKALGLDSAN----EKGLYRRGE--AQLLMNEFESAKGDFEKVLEV 380 (457)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTC----HHHHHHHHH--HHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCCcc----HHHHHHHHH--HHHHccCHHHHHHHHHHHHHh
Confidence 456777778889988888888877665533 344445544 456679999999999999853
No 174
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=25.34 E-value=1.2e+02 Score=20.12 Aligned_cols=26 Identities=23% Similarity=0.169 Sum_probs=20.9
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 81 CAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 81 lAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
...|......|++..|...+++++..
T Consensus 11 ~~lg~~~~~~g~~~~A~~~~~~al~~ 36 (100)
T 3ma5_A 11 YALAQEHLKHDNASRALALFEELVET 36 (100)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 34455667899999999999999864
No 175
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=24.95 E-value=3.6e+02 Score=23.88 Aligned_cols=66 Identities=5% Similarity=-0.111 Sum_probs=41.7
Q ss_pred HHHHHhccCCchhhhhhhHHhhcc---CCcchh-hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhc
Q 047859 43 EAVALFNERAYYKCHDCLESLWYT---AEEPTR-TLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGKLRKM 110 (214)
Q Consensus 43 ~gi~LFN~G~YfEAHEVLEe~Wk~---~~g~er-~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~L~~~ 110 (214)
....+.++|+|=+|=+.+|..=.. .-++.- ...+.+-.+|.++ ...|++..|..++++++......
T Consensus 293 ~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y--~~~g~~~eA~~~~~~~L~i~~~~ 362 (429)
T 3qwp_A 293 KIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDAC--INLGLLEEALFYGTRTMEPYRIF 362 (429)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHH--HHHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHH--HhhccHHHHHHHHHHHHHhHHHH
Confidence 334455688888877776654222 113333 2334444444433 45799999999999999988765
No 176
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=24.07 E-value=1.7e+02 Score=23.77 Aligned_cols=59 Identities=12% Similarity=-0.046 Sum_probs=40.4
Q ss_pred cchhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 37 ENCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 37 ~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
..-.+..|..+...|+|=+|-+.++. ++ .-..+. ..|....+.|++..|...+++++..
T Consensus 101 ~~~~~~la~~~~~~g~~~~Al~~l~~-----~~-~~~~~~-----~l~~~~~~~g~~~~A~~~l~~~~~~ 159 (291)
T 3mkr_A 101 TTFLLMAASIYFYDQNPDAALRTLHQ-----GD-SLECMA-----MTVQILLKLDRLDLARKELKKMQDQ 159 (291)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHTT-----CC-SHHHHH-----HHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHhC-----CC-CHHHHH-----HHHHHHHHCCCHHHHHHHHHHHHhh
Confidence 34457778888888998888888776 21 112222 2234466789999999999988754
No 177
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=23.99 E-value=2.3e+02 Score=25.09 Aligned_cols=30 Identities=7% Similarity=-0.016 Sum_probs=16.0
Q ss_pred hhHHHHHHHhccCCchhhhhhhHHhhccCC
Q 047859 39 CSFDEAVALFNERAYYKCHDCLESLWYTAE 68 (214)
Q Consensus 39 ~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~ 68 (214)
.-+..|..++..|+|=+|-+.++.+-...+
T Consensus 76 ~~~~lg~~~~~~g~~~eA~~~~~~al~~~p 105 (477)
T 1wao_1 76 GYYRRAASNMALGKFRAALRDYETVVKVKP 105 (477)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 334445555555666666655555554443
No 178
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=23.87 E-value=1.2e+02 Score=19.39 Aligned_cols=35 Identities=9% Similarity=-0.055 Sum_probs=28.0
Q ss_pred hhHHHHHHHhccCCchhhhhhhHHhhccCCcchhh
Q 047859 39 CSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRT 73 (214)
Q Consensus 39 ~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~ 73 (214)
.-+..|..++..|+|=+|-+.++.+....+.....
T Consensus 37 ~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 71 (99)
T 2kc7_A 37 AYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPAL 71 (99)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHH
Confidence 55677888899999999999999988877754443
No 179
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=23.55 E-value=1.4e+02 Score=26.18 Aligned_cols=26 Identities=15% Similarity=0.360 Sum_probs=19.0
Q ss_pred chhHHHHHHHhccCCchhhhhhhHHh
Q 047859 38 NCSFDEAVALFNERAYYKCHDCLESL 63 (214)
Q Consensus 38 ~~~l~~gi~LFN~G~YfEAHEVLEe~ 63 (214)
...+..-..-..+|+|||||..+--+
T Consensus 14 ~r~l~rl~~~I~~G~yYEAhQ~~Rtl 39 (312)
T 2wpv_A 14 AKTLQRFENKIKAGDYYEAHQTLRTI 39 (312)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccChHHHHHHHHHH
Confidence 34555666677899999999876543
No 180
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=23.25 E-value=2.9e+02 Score=22.05 Aligned_cols=50 Identities=4% Similarity=-0.064 Sum_probs=22.2
Q ss_pred cCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 047859 50 ERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLG 105 (214)
Q Consensus 50 ~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~ 105 (214)
.|++=+|-+++|..-+..|. ...+|..++++ ....|+...|+.++++|+.
T Consensus 182 ~~~~~~A~~~~~~al~~~p~-~~~~~~~~~~~-----~~~~g~~~~A~~~~~~al~ 231 (308)
T 2ond_A 182 SKDKSVAFKIFELGLKKYGD-IPEYVLAYIDY-----LSHLNEDNNTRVLFERVLT 231 (308)
T ss_dssp SCCHHHHHHHHHHHHHHHTT-CHHHHHHHHHH-----HHTTCCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHH-----HHHCCCHHHHHHHHHHHHh
Confidence 35555555555544443332 22344444332 2234555555555555544
No 181
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=23.10 E-value=1.4e+02 Score=26.25 Aligned_cols=63 Identities=3% Similarity=0.001 Sum_probs=44.8
Q ss_pred cchhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhc---------CCHHHHHHHHHHHHHH
Q 047859 37 ENCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFN---------QNHKGAMMELGEGLGK 106 (214)
Q Consensus 37 ~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~r---------GN~~GA~~Ll~rAl~~ 106 (214)
...-+.-|..++..|+|=+|-+.++.+-...+. . ..+.+++ ...... |++..|...+++|+..
T Consensus 137 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~--~---~~~~~lg--~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 208 (474)
T 4abn_A 137 VEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN--K---VSLQNLS--MVLRQLQTDSGDEHSRHVMDSVRQAKLAVQM 208 (474)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC--H---HHHHHHH--HHHTTCCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC--H---HHHHHHH--HHHHHhccCChhhhhhhHHHHHHHHHHHHHh
Confidence 445567788888899999999999998877544 1 3333333 344455 8888888888888754
No 182
>1giy_D 50S ribosomal protein L2; ribosome assembly, protein synthesis, LIFE; 5.50A {Thermus thermophilus} SCOP: i.1.1.1 PDB: 1ml5_d* 1yl3_D 2b66_D 2b9n_D 2b9p_D
Probab=23.05 E-value=53 Score=27.27 Aligned_cols=45 Identities=18% Similarity=0.168 Sum_probs=33.0
Q ss_pred hhhcccccCceeeeccCCCCceEEEEcCCCCCC---CCCCCceeeccc
Q 047859 158 LLGDYAAGQQLYHLESDHNQIMYIVFDPQRSYG---SDDKSIKVKLPT 202 (214)
Q Consensus 158 ~Lg~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~klp~ 202 (214)
-|++.|.|-.++.+|..|..+-.++=|+..+-. ....-.+||||.
T Consensus 71 pL~~iP~Gt~I~NIE~~pG~gg~laRsAGt~a~ii~ke~~~~~vrLPS 118 (178)
T 1giy_D 71 PLENIPVGTLVHNIELKPGRGGQLVRAAGTSAQVLGKEGKYVIVRLAS 118 (178)
T ss_pred ccccCCCCCEEEeEeccCCCCeEEEEeCCCeEEEEEecCCeEEEECCC
Confidence 488999999999999998877777776665522 112235889985
No 183
>1orj_A Flagellar protein FLIS; flagellin, flagellar export, chaperone, flagellum, four HELI; 2.25A {Aquifex aeolicus} SCOP: a.24.19.1 PDB: 1ory_A
Probab=22.14 E-value=1.3e+02 Score=23.29 Aligned_cols=38 Identities=5% Similarity=0.029 Sum_probs=31.8
Q ss_pred HHHHHHH-HHHHHHHHhcCCH-HHH---HHHHHHHHHHHhhcc
Q 047859 74 LIHGVLQ-CAVGFYHLFNQNH-KGA---MMELGEGLGKLRKMN 111 (214)
Q Consensus 74 ~lqGLIQ-lAvAl~H~~rGN~-~GA---~~Ll~rAl~~L~~~~ 111 (214)
++.|+|. +..|..+..+||. ... ...+.||...+..+.
T Consensus 25 Lydgai~~l~~A~~ai~~~d~~~~k~~~~~~i~KA~~Ii~eL~ 67 (130)
T 1orj_A 25 LYDKAIECLERAIEIYDQVNELEKRKEFVENIDRVYDIISALK 67 (130)
T ss_dssp HHHHHHHHHHHHHHTGGGTTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6778887 7778888999999 877 889999999987763
No 184
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=22.12 E-value=54 Score=28.35 Aligned_cols=77 Identities=9% Similarity=0.010 Sum_probs=0.0
Q ss_pred cccccccee-------eeeeecccCCCCCCCcchhHHHHHHHhccCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHH
Q 047859 13 HTTNFKSFR-------VLYRYSAKEEDDNDGENCSFDEAVALFNERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGF 85 (214)
Q Consensus 13 ~~~~~~~~~-------~~~~~~~~~~~~~~e~~~~l~~gi~LFN~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl 85 (214)
|.+.-..+. |.|+-...++. .+..+..|...|+|=+|.++|+.+=...+++. .+...|+
T Consensus 78 p~~l~a~~~~~g~y~~~~~~v~~r~dl-------~LayA~~L~~~g~y~eA~~~l~~~~~~~p~~~-------~~~~~a~ 143 (282)
T 4f3v_A 78 MSTLNARIAIGGLYGDITYPVTSPLAI-------TMGFAACEAAQGNYADAMEALEAAPVAGSEHL-------VAWMKAV 143 (282)
T ss_dssp GGGGCCEEECCTTTCCCEEECSSHHHH-------HHHHHHHHHHHTCHHHHHHHHTSSCCTTCHHH-------HHHHHHH
T ss_pred hhhhhhhhccCCcccccccccCCHhHH-------HHHHHHHHHHCCCHHHHHHHHHHHHhcCCchH-------HHHHHHH
Q ss_pred HHHhcCCHHHHHHHHHHH
Q 047859 86 YHLFNQNHKGAMMELGEG 103 (214)
Q Consensus 86 ~H~~rGN~~GA~~Ll~rA 103 (214)
.+.+.+.|..|...++++
T Consensus 144 l~~~~~r~~dA~~~l~~a 161 (282)
T 4f3v_A 144 VYGAAERWTDVIDQVKSA 161 (282)
T ss_dssp HHHHTTCHHHHHHHHTTG
T ss_pred HHHHcCCHHHHHHHHHHh
No 185
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=22.09 E-value=1.8e+02 Score=19.44 Aligned_cols=54 Identities=13% Similarity=-0.012 Sum_probs=33.0
Q ss_pred cCCchhhhhhhHHhhccCCcchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 047859 50 ERAYYKCHDCLESLWYTAEEPTRTLIHGVLQCAVGFYHLFNQNHKGAMMELGEGLGK 106 (214)
Q Consensus 50 ~G~YfEAHEVLEe~Wk~~~g~er~~lqGLIQlAvAl~H~~rGN~~GA~~Ll~rAl~~ 106 (214)
.|+|=+|-+.++.+-....+ .......++++ |..+...|++..|...+++|+..
T Consensus 3 ~g~~~~A~~~~~~al~~~~~-~p~~~~~~~~l--g~~~~~~~~~~~A~~~~~~al~~ 56 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIASGLQ-GKDLAECYLGL--GSTFRTLGEYRKAEAVLANGVKQ 56 (117)
T ss_dssp ----CCCHHHHHHHHSSCCC-HHHHHHHHHHH--HHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCC-CccHHHHHHHH--HHHHHHcCCHHHHHHHHHHHHHh
Confidence 45666777777776554211 22333444444 55677899999999999999865
No 186
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=21.82 E-value=2.3e+02 Score=25.59 Aligned_cols=67 Identities=19% Similarity=0.149 Sum_probs=48.2
Q ss_pred HHHHHHhccCCchhhhhhhHHhhccCCc-chhhHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHh
Q 047859 42 DEAVALFNERAYYKCHDCLESLWYTAEE-PTRTLIHGVLQCAVGFYHL-FNQNHKGAMMELGEGLGKLR 108 (214)
Q Consensus 42 ~~gi~LFN~G~YfEAHEVLEe~Wk~~~g-~er~~lqGLIQlAvAl~H~-~rGN~~GA~~Ll~rAl~~L~ 108 (214)
.+-..++..+.+-.+-..++..=..... ....-+||.|.++.|++|. ..+|++.|...|=.|.....
T Consensus 144 le~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~f~ 212 (394)
T 3txn_A 144 LESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGALDLQSGILHAADERDFKTAFSYFYEAFEGFD 212 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHHHHHhhHHHHHhccCHHHHHHHHHHHHhccc
Confidence 3344455577777777777665333221 2445689999999999999 99999999999988865443
No 187
>3fap_B FRAP, FKBP12-rapamycin associated protein; complex, gene therapy, cell cycle; HET: ARD; 1.85A {Homo sapiens} SCOP: a.24.7.1 PDB: 2fap_B* 2rse_B 1nsg_B* 4fap_B* 1aue_A 2gaq_A 1fap_B*
Probab=21.20 E-value=1.6e+02 Score=21.76 Aligned_cols=46 Identities=15% Similarity=0.182 Sum_probs=27.3
Q ss_pred HhcCCHHHHHHHHHHHHHHHhhccCCC--CCC-cccccCHHHHHHHHHH
Q 047859 88 LFNQNHKGAMMELGEGLGKLRKMNLRS--GPF-HEFENEISAALEFIYR 133 (214)
Q Consensus 88 ~~rGN~~GA~~Ll~rAl~~L~~~~~~~--~p~-~~~GvDV~aLl~~i~~ 133 (214)
....|..++...+..-...|.+-|--. ..| ..+|-|+.....|+.+
T Consensus 21 f~~~n~~~m~~~L~pLh~~l~~~peT~~E~sF~~~fG~~L~~A~~~~~~ 69 (94)
T 3fap_B 21 FGERNVKGMFEVLEPLHAMMERGPQTLKETSFNQAYGRDLMEAQEWCRK 69 (94)
T ss_dssp HTTCCHHHHHHHHHHHHHHHHHCCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccCCHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345788888888888877777643000 001 1366676666666654
No 188
>1rl2_A Protein (ribosomal protein L2); RNA-binding domain, peptidyltransferease center, X-RAY diffraction; 2.30A {Geobacillus stearothermophilus} SCOP: b.34.5.3 b.40.4.5 PDB: 1c04_A 487d_I
Probab=20.75 E-value=37 Score=26.97 Aligned_cols=45 Identities=18% Similarity=0.168 Sum_probs=31.5
Q ss_pred hhhcccccCceeeeccCCCCceEEEEcCCCCCC---CCCCCceeeccc
Q 047859 158 LLGDYAAGQQLYHLESDHNQIMYIVFDPQRSYG---SDDKSIKVKLPT 202 (214)
Q Consensus 158 ~Lg~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~klp~ 202 (214)
-|++.|.|-.++.+|..|+.+-.++=|+..+-. ....-..||||.
T Consensus 71 pL~~iP~Gt~IhNIE~~pG~gg~laRsAGt~a~ii~ke~~~~~vrLPS 118 (137)
T 1rl2_A 71 PLENIPVGTLVHNIELKPGRGGQLVRAAGTSAQVLGKEGKYVIVRLAS 118 (137)
T ss_dssp EGGGSCTTCEEESEESSTTSCEEESSSSSCCEEEEEEETTEEEEECTT
T ss_pred ehhhCCCCCEEEEEEccCCCCcEEEEeCCCeEEEEEEcCCEEEEECCC
Confidence 388999999999999988777666655555421 112235888885
Done!