Query 047865
Match_columns 389
No_of_seqs 140 out of 740
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 06:19:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047865.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047865hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4h08_A Putative hydrolase; GDS 80.4 1.7 5.9E-05 37.5 4.7 51 200-273 74-124 (200)
2 4hf7_A Putative acylhydrolase; 72.6 1.2 4.3E-05 39.1 1.5 30 239-272 101-130 (209)
3 3hp4_A GDSL-esterase; psychrot 69.1 1.5 5.2E-05 37.1 1.2 49 200-271 66-115 (185)
4 3rjt_A Lipolytic protein G-D-S 63.8 2.7 9.4E-05 36.0 1.8 26 238-267 112-137 (216)
5 1ivn_A Thioesterase I; hydrola 59.3 3.1 0.0001 35.5 1.3 27 238-268 81-107 (190)
6 3mil_A Isoamyl acetate-hydroly 56.6 3.5 0.00012 36.0 1.3 54 200-272 72-125 (240)
7 1yzf_A Lipase/acylhydrolase; s 55.0 4 0.00014 34.3 1.3 49 200-271 67-115 (195)
8 2q0q_A ARYL esterase; SGNH hyd 51.6 4.6 0.00016 34.8 1.1 32 238-269 104-140 (216)
9 3dci_A Arylesterase; SGNH_hydr 48.4 5.5 0.00019 35.3 1.1 34 238-271 122-158 (232)
10 2hsj_A Putative platelet activ 48.4 6.9 0.00024 33.6 1.8 33 238-272 104-136 (214)
11 3dc7_A Putative uncharacterize 46.5 6.6 0.00023 34.5 1.3 17 95-111 18-34 (232)
12 1fxw_F Alpha2, platelet-activa 46.1 12 0.00041 32.9 3.0 32 238-271 111-142 (229)
13 1vjg_A Putative lipase from th 45.2 6 0.00021 34.4 0.9 29 238-271 112-140 (218)
14 3p94_A GDSL-like lipase; serin 44.8 8.1 0.00028 32.8 1.6 70 238-332 96-165 (204)
15 3bzw_A Putative lipase; protei 42.1 9.5 0.00032 34.7 1.7 80 240-333 142-221 (274)
16 1es9_A PAF-AH, platelet-activa 40.9 11 0.00036 33.2 1.8 32 238-271 110-141 (232)
17 2vpt_A Lipolytic enzyme; ester 39.0 11 0.00037 32.8 1.5 14 98-111 5-18 (215)
18 1fll_X B-cell surface antigen 38.1 17 0.00058 21.7 1.7 11 362-372 6-16 (26)
19 2w9x_A AXE2A, CJCE2B, putative 35.4 14 0.00049 35.5 1.8 74 238-342 266-339 (366)
20 2waa_A Acetyl esterase, xylan 34.0 13 0.00043 35.6 1.2 28 238-267 245-272 (347)
21 3t6g_B Breast cancer anti-estr 33.9 2.3 8E-05 38.9 -3.7 17 95-111 143-159 (229)
22 2wao_A Endoglucanase E; plant 32.8 14 0.00048 35.1 1.3 28 238-267 233-260 (341)
23 1k7c_A Rhamnogalacturonan acet 29.3 18 0.0006 32.2 1.3 12 100-111 2-13 (233)
24 2o14_A Hypothetical protein YX 26.8 24 0.00081 34.3 1.8 15 97-111 161-175 (375)
25 1vcc_A DNA topoisomerase I; DN 26.6 9.4 0.00032 28.7 -0.9 15 99-113 55-70 (77)
26 3skv_A SSFX3; jelly roll, GDSL 25.6 23 0.00078 34.8 1.4 14 98-111 185-198 (385)
27 3tpf_A Otcase, ornithine carba 25.0 38 0.0013 32.3 2.8 25 96-122 143-168 (307)
28 3r7f_A Aspartate carbamoyltran 23.1 41 0.0014 32.1 2.6 27 96-122 145-171 (304)
29 3grf_A Ornithine carbamoyltran 23.1 40 0.0014 32.5 2.5 27 95-122 158-184 (328)
30 2qru_A Uncharacterized protein 22.9 67 0.0023 28.6 4.0 23 98-120 95-117 (274)
31 4amu_A Ornithine carbamoyltran 22.5 45 0.0015 32.7 2.8 26 96-122 178-203 (365)
32 3q98_A Transcarbamylase; rossm 21.1 49 0.0017 32.8 2.8 27 96-122 189-220 (399)
33 3csu_A Protein (aspartate carb 20.2 52 0.0018 31.4 2.7 28 96-123 152-179 (310)
No 1
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=80.35 E-value=1.7 Score=37.48 Aligned_cols=51 Identities=14% Similarity=0.186 Sum_probs=34.9
Q ss_pred cccEEEEecccccccCCCceeccceecCCCccccccCHHHHHHHHHHHHHHHHHhhcCCCcceEEEeecCCCCc
Q 047865 200 GVDYLIFNTYIWWTKYPTMKVLRGSFDEGATEYDEIDMYTVYEKTLRAWGKWVEENVNPNLTSVFFSSAAPKHV 273 (389)
Q Consensus 200 ~~DvlV~ntG~Ww~~~~~~~~~~g~~~~~~~~~~~~~~~~ay~~al~t~~~~v~~~~~~~~~~vffRt~SP~Hf 273 (389)
.+|+|||+.|..=.. ...+.|+..|+++++.+.+. ...++++|-+..|-..
T Consensus 74 ~pd~Vvi~~G~ND~~---------------------~~~~~~~~~l~~ii~~l~~~--~p~~~ii~~~~~P~~~ 124 (200)
T 4h08_A 74 KFDVIHFNNGLHGFD---------------------YTEEEYDKSFPKLIKIIRKY--APKAKLIWANTTPVRT 124 (200)
T ss_dssp CCSEEEECCCSSCTT---------------------SCHHHHHHHHHHHHHHHHHH--CTTCEEEEECCCCCEE
T ss_pred CCCeEEEEeeeCCCC---------------------CCHHHHHHHHHHHHHHHhhh--CCCccEEEeccCCCcc
Confidence 479999988854110 12356888888888877653 3466888888888653
No 2
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=72.63 E-value=1.2 Score=39.07 Aligned_cols=30 Identities=13% Similarity=0.154 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcceEEEeecCCCC
Q 047865 239 TVYEKTLRAWGKWVEENVNPNLTSVFFSSAAPKH 272 (389)
Q Consensus 239 ~ay~~al~t~~~~v~~~~~~~~~~vffRt~SP~H 272 (389)
+.+...++++++.+.+ ..++|++-|..|..
T Consensus 101 ~~~~~~l~~ii~~~~~----~~~~iil~~~~P~~ 130 (209)
T 4hf7_A 101 DYTFGNIASMAELAKA----NKIKVILTSVLPAA 130 (209)
T ss_dssp HHHHHHHHHHHHHHHH----TTCEEEEECCCCCS
T ss_pred HHHHHHHHHhhHHHhc----cCceEEEEeeeccC
Confidence 4455666666665543 35688898888864
No 3
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=69.11 E-value=1.5 Score=37.06 Aligned_cols=49 Identities=12% Similarity=-0.067 Sum_probs=29.6
Q ss_pred cccEEEEecccccccCCCceeccceecCCCccccccCHHHHHHHHHHHHHHHHHhhcCCCcceEEEeec-CCC
Q 047865 200 GVDYLIFNTYIWWTKYPTMKVLRGSFDEGATEYDEIDMYTVYEKTLRAWGKWVEENVNPNLTSVFFSSA-APK 271 (389)
Q Consensus 200 ~~DvlV~ntG~Ww~~~~~~~~~~g~~~~~~~~~~~~~~~~ay~~al~t~~~~v~~~~~~~~~~vffRt~-SP~ 271 (389)
.+|+|||..|.-=.. .+ ...+.|+..++.+++.+.+. ...|++-++ .|.
T Consensus 66 ~pd~vvi~~G~ND~~-------~~------------~~~~~~~~~~~~~i~~~~~~----~~~vvl~~~~~p~ 115 (185)
T 3hp4_A 66 EPTHVLIELGANDGL-------RG------------FPVKKMQTNLTALVKKSQAA----NAMTALMEIYIPP 115 (185)
T ss_dssp CCSEEEEECCHHHHH-------TT------------CCHHHHHHHHHHHHHHHHHT----TCEEEEECCCCCS
T ss_pred CCCEEEEEeecccCC-------CC------------cCHHHHHHHHHHHHHHHHHc----CCeEEEEeCCCCC
Confidence 579999998852110 00 11367888888888887663 345555553 343
No 4
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=63.79 E-value=2.7 Score=35.97 Aligned_cols=26 Identities=23% Similarity=0.285 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcceEEEee
Q 047865 238 YTVYEKTLRAWGKWVEENVNPNLTSVFFSS 267 (389)
Q Consensus 238 ~~ay~~al~t~~~~v~~~~~~~~~~vffRt 267 (389)
.+.|+..|+.+++.+.+. ..++|+-|
T Consensus 112 ~~~~~~~l~~~i~~~~~~----~~~vil~~ 137 (216)
T 3rjt_A 112 IDEYRDTLRHLVATTKPR----VREMFLLS 137 (216)
T ss_dssp HHHHHHHHHHHHHHHGGG----SSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHhc----CCeEEEEC
Confidence 567888888888887653 45676665
No 5
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=59.28 E-value=3.1 Score=35.48 Aligned_cols=27 Identities=19% Similarity=0.027 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcceEEEeec
Q 047865 238 YTVYEKTLRAWGKWVEENVNPNLTSVFFSSA 268 (389)
Q Consensus 238 ~~ay~~al~t~~~~v~~~~~~~~~~vffRt~ 268 (389)
.+.|+..++.+++.+.+. ..++++-+.
T Consensus 81 ~~~~~~~l~~li~~~~~~----~~~vil~~~ 107 (190)
T 1ivn_A 81 PQQTEQTLRQILQDVKAA----NAEPLLMQI 107 (190)
T ss_dssp HHHHHHHHHHHHHHHHHT----TCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHc----CCCEEEEec
Confidence 366888888888877653 345666554
No 6
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=56.62 E-value=3.5 Score=36.04 Aligned_cols=54 Identities=4% Similarity=-0.124 Sum_probs=32.3
Q ss_pred cccEEEEecccccccCCCceeccceecCCCccccccCHHHHHHHHHHHHHHHHHhhcCCCcceEEEeecCCCC
Q 047865 200 GVDYLIFNTYIWWTKYPTMKVLRGSFDEGATEYDEIDMYTVYEKTLRAWGKWVEENVNPNLTSVFFSSAAPKH 272 (389)
Q Consensus 200 ~~DvlV~ntG~Ww~~~~~~~~~~g~~~~~~~~~~~~~~~~ay~~al~t~~~~v~~~~~~~~~~vffRt~SP~H 272 (389)
.+|+|||..|.==.... + . .. ...+.|+..|+.+++.+.+. ..+|++-+..|..
T Consensus 72 ~pd~vvi~~G~ND~~~~------~-----~---~~-~~~~~~~~~l~~~i~~~~~~----~~~vil~~~~p~~ 125 (240)
T 3mil_A 72 NIVMATIFLGANDACSA------G-----P---QS-VPLPEFIDNIRQMVSLMKSY----HIRPIIIGPGLVD 125 (240)
T ss_dssp CEEEEEEECCTTTTSSS------S-----T---TC-CCHHHHHHHHHHHHHHHHHT----TCEEEEECCCCCC
T ss_pred CCCEEEEEeecCcCCcc------C-----C---CC-CCHHHHHHHHHHHHHHHHHc----CCeEEEEcCCCCC
Confidence 58999999885211000 0 0 01 12467888888888877653 3478887766643
No 7
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5
Probab=54.99 E-value=4 Score=34.28 Aligned_cols=49 Identities=6% Similarity=-0.059 Sum_probs=29.1
Q ss_pred cccEEEEecccccccCCCceeccceecCCCccccccCHHHHHHHHHHHHHHHHHhhcCCCcceEEEeecCCC
Q 047865 200 GVDYLIFNTYIWWTKYPTMKVLRGSFDEGATEYDEIDMYTVYEKTLRAWGKWVEENVNPNLTSVFFSSAAPK 271 (389)
Q Consensus 200 ~~DvlV~ntG~Ww~~~~~~~~~~g~~~~~~~~~~~~~~~~ay~~al~t~~~~v~~~~~~~~~~vffRt~SP~ 271 (389)
.+|+|||..|.-=.. . + . . ...+.|+..|+.+++.+. ..++++-+..|.
T Consensus 67 ~pd~vvi~~G~ND~~-----~--~------~---~-~~~~~~~~~l~~~i~~~~------~~~vi~~~~~p~ 115 (195)
T 1yzf_A 67 KPDEVVIFFGANDAS-----L--D------R---N-ITVATFRENLETMIHEIG------SEKVILITPPYA 115 (195)
T ss_dssp CCSEEEEECCTTTTC-----T--T------S---C-CCHHHHHHHHHHHHHHHC------GGGEEEECCCCC
T ss_pred CCCEEEEEeeccccC-----c--c------C---C-CCHHHHHHHHHHHHHHhc------CCEEEEEcCCCC
Confidence 589999998852111 0 0 0 0 123567777777766553 456777777664
No 8
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A*
Probab=51.63 E-value=4.6 Score=34.82 Aligned_cols=32 Identities=9% Similarity=-0.111 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHHhhcC-----CCcceEEEeecC
Q 047865 238 YTVYEKTLRAWGKWVEENVN-----PNLTSVFFSSAA 269 (389)
Q Consensus 238 ~~ay~~al~t~~~~v~~~~~-----~~~~~vffRt~S 269 (389)
.+.|+..++.+++.+.+.-. ...++|++-+..
T Consensus 104 ~~~~~~~l~~li~~~~~~~~~~~~~~P~~~iil~~~p 140 (216)
T 2q0q_A 104 PLDIALGMSVLVTQVLTSAGGVGTTYPAPKVLVVSPP 140 (216)
T ss_dssp HHHHHHHHHHHHHHHHTCTTTTTBCCCCCEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHhcccccccCCCCeEEEEeCC
Confidence 35788888888887765320 024567776553
No 9
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str}
Probab=48.42 E-value=5.5 Score=35.29 Aligned_cols=34 Identities=12% Similarity=0.159 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHHHhhcCC---CcceEEEeecCCC
Q 047865 238 YTVYEKTLRAWGKWVEENVNP---NLTSVFFSSAAPK 271 (389)
Q Consensus 238 ~~ay~~al~t~~~~v~~~~~~---~~~~vffRt~SP~ 271 (389)
.+.|+..|+.+++.+.+.... ..+.|++-+..|-
T Consensus 122 ~~~~~~~l~~li~~ir~~~~~~~~p~~~iil~~p~~~ 158 (232)
T 3dci_A 122 AEAAVSGMRRLAQIVETFIYKPREAVPKLLIVAPPPC 158 (232)
T ss_dssp HHHHHHHHHHHHHHHHHCCCSSTTCCCEEEEEECCCC
T ss_pred HHHHHHHHHHHHHHHHHhcccccCCCCeEEEEeCCCc
Confidence 467888888888887663210 3567777764443
No 10
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3
Probab=48.36 E-value=6.9 Score=33.64 Aligned_cols=33 Identities=21% Similarity=0.105 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcceEEEeecCCCC
Q 047865 238 YTVYEKTLRAWGKWVEENVNPNLTSVFFSSAAPKH 272 (389)
Q Consensus 238 ~~ay~~al~t~~~~v~~~~~~~~~~vffRt~SP~H 272 (389)
.+.|+..++.+++.+.+.. ...+|++-+..|..
T Consensus 104 ~~~~~~~l~~~i~~l~~~~--p~~~iil~~~~p~~ 136 (214)
T 2hsj_A 104 VNEALNNLEAIIQSVARDY--PLTEIKLLSILPVN 136 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHC--TTCEEEEECCCCCC
T ss_pred HHHHHHHHHHHHHHHHHhC--CCCeEEEEecCCCC
Confidence 3567788888888776642 34678888887754
No 11
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=46.46 E-value=6.6 Score=34.47 Aligned_cols=17 Identities=41% Similarity=0.429 Sum_probs=13.9
Q ss_pred HhcCCeEEEEechhhHH
Q 047865 95 KLRGKRLMLVGDSIHYN 111 (389)
Q Consensus 95 ~lrgk~l~FVGDSl~Rn 111 (389)
.+..++|+|+|||++..
T Consensus 18 ~~~~~~i~~lGDSit~G 34 (232)
T 3dc7_A 18 HVSFKRPAWLGDSITAN 34 (232)
T ss_dssp CBCCSSEEEEESTTTST
T ss_pred CCCcceEEEEccccccc
Confidence 34568999999999874
No 12
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A
Probab=46.07 E-value=12 Score=32.93 Aligned_cols=32 Identities=6% Similarity=0.056 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcceEEEeecCCC
Q 047865 238 YTVYEKTLRAWGKWVEENVNPNLTSVFFSSAAPK 271 (389)
Q Consensus 238 ~~ay~~al~t~~~~v~~~~~~~~~~vffRt~SP~ 271 (389)
.+.|...|+.+++.+.+.. ..++|++-+..|.
T Consensus 111 ~~~~~~~l~~~i~~l~~~~--p~~~iil~~~~p~ 142 (229)
T 1fxw_F 111 AEEVAGGIEAIVQLINTRQ--PQAKIIVLGLLPR 142 (229)
T ss_dssp HHHHHHHHHHHHHHHHHHC--TTCEEEEECCCCC
T ss_pred HHHHHHHHHHHHHHHHHHC--CCCeEEEEeCCCC
Confidence 3567777777777776542 3467888776664
No 13
>1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A
Probab=45.21 E-value=6 Score=34.36 Aligned_cols=29 Identities=21% Similarity=0.063 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcceEEEeecCCC
Q 047865 238 YTVYEKTLRAWGKWVEENVNPNLTSVFFSSAAPK 271 (389)
Q Consensus 238 ~~ay~~al~t~~~~v~~~~~~~~~~vffRt~SP~ 271 (389)
.+.|+..++.+++.+.+. .+|++-+..|.
T Consensus 112 ~~~~~~~l~~li~~l~~~-----~~iil~~~~p~ 140 (218)
T 1vjg_A 112 IAETIKNTREILTQAKKL-----YPVLMISPAPY 140 (218)
T ss_dssp HHHHHHHHHHHHHHHHHH-----SCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHHHHh-----CcEEEECCCCc
Confidence 466788888888777664 46777777554
No 14
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=44.79 E-value=8.1 Score=32.77 Aligned_cols=70 Identities=14% Similarity=0.079 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcceEEEeecCCCCcccCCCCCCCCCCCCCccccCCCCccccccCCcHHHHHHHHHHHh
Q 047865 238 YTVYEKTLRAWGKWVEENVNPNLTSVFFSSAAPKHVRSSDRNNVNGVKCVEETTPIFNRTTRLEVGTNQQLFAIAANVTQ 317 (389)
Q Consensus 238 ~~ay~~al~t~~~~v~~~~~~~~~~vffRt~SP~Hf~~g~Wn~~~gG~C~~~T~P~~~~~~~~~~~~~~~~~~i~~~~~~ 317 (389)
.+.|+..++.+++.+.+ ....+++-+..|..- ..|. |..... ..-..++++++++.+
T Consensus 96 ~~~~~~~~~~~i~~~~~----~~~~vil~~~~p~~~--~~~~------------~~~~~~-----~~~~~~n~~l~~~a~ 152 (204)
T 3p94_A 96 LENVFGNLVSMAELAKA----NHIKVIFCSVLPAYD--FPWR------------PGMQPA-----DKVIQLNKWIKEYAD 152 (204)
T ss_dssp HHHHHHHHHHHHHHHHH----TTCEEEEECCCCCSC--BTTB------------TTCCCH-----HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh----CCCeEEEEeCCCCCC--CCCC------------ccccHH-----HHHHHHHHHHHHHHH
Confidence 45677778877777655 255788888777542 1222 100000 001234555565554
Q ss_pred cCCcceEEeeccccc
Q 047865 318 SMEVPVHFLNITSLS 332 (389)
Q Consensus 318 ~~~~~v~lLDIT~ls 332 (389)
+. .+.++|+....
T Consensus 153 ~~--~v~~iD~~~~~ 165 (204)
T 3p94_A 153 KN--GLTYVDYHSAM 165 (204)
T ss_dssp HT--TCEEECHHHHH
T ss_pred Hc--CCcEEchhhhh
Confidence 43 78999998776
No 15
>3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9
Probab=42.06 E-value=9.5 Score=34.74 Aligned_cols=80 Identities=4% Similarity=-0.027 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHhhcCCCcceEEEeecCCCCcccCCCCCCCCCCCCCccccCCCCccccccCCcHHHHHHHHHHHhcC
Q 047865 240 VYEKTLRAWGKWVEENVNPNLTSVFFSSAAPKHVRSSDRNNVNGVKCVEETTPIFNRTTRLEVGTNQQLFAIAANVTQSM 319 (389)
Q Consensus 240 ay~~al~t~~~~v~~~~~~~~~~vffRt~SP~Hf~~g~Wn~~~gG~C~~~T~P~~~~~~~~~~~~~~~~~~i~~~~~~~~ 319 (389)
.|+..|+.+++.+.+.. ..++||+-+.. +.....|. |.. -.|......... ..-..++++++++.++
T Consensus 142 ~~~~~l~~li~~lr~~~--p~a~Iilitp~--~~~~~~~~------~~~-~~p~~~~~~~~~-~~~~~~n~~i~~~a~~- 208 (274)
T 3bzw_A 142 TYRGRINIGITQLKKLF--PDKQIVLLTPL--HRSLANFG------DKN-VQPDESYQNGCG-EYIDAYVQAIKEAGNI- 208 (274)
T ss_dssp SHHHHHHHHHHHHHHHC--TTSEEEEECCC--CCCCEECS------TTE-EECCTTBCCTTS-CCHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHHC--CCCeEEEEecc--cccccccc------ccc-cCcccccchhhH-HHHHHHHHHHHHHHHH-
Confidence 46667777777666542 35677775443 32211121 110 123321100000 0113456666666543
Q ss_pred CcceEEeecccccc
Q 047865 320 EVPVHFLNITSLSE 333 (389)
Q Consensus 320 ~~~v~lLDIT~ls~ 333 (389)
..+.++|+..++.
T Consensus 209 -~~v~~vD~~~~~~ 221 (274)
T 3bzw_A 209 -WGIPVIDFNAVTG 221 (274)
T ss_dssp -HTCCEECHHHHTC
T ss_pred -cCCCEEcchhhhc
Confidence 3589999998764
No 16
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A*
Probab=40.88 E-value=11 Score=33.25 Aligned_cols=32 Identities=16% Similarity=0.115 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcceEEEeecCCC
Q 047865 238 YTVYEKTLRAWGKWVEENVNPNLTSVFFSSAAPK 271 (389)
Q Consensus 238 ~~ay~~al~t~~~~v~~~~~~~~~~vffRt~SP~ 271 (389)
.+.|...++.+++.+.+.. ..++|++-+..|.
T Consensus 110 ~~~~~~~l~~~i~~l~~~~--p~~~ii~~~~~p~ 141 (232)
T 1es9_A 110 AEQVTGGIKAIVQLVNERQ--PQARVVVLGLLPR 141 (232)
T ss_dssp HHHHHHHHHHHHHHHHHHS--TTCEEEEECCCCC
T ss_pred HHHHHHHHHHHHHHHHHHC--CCCeEEEecCCCC
Confidence 3567777777777776642 3567888888764
No 17
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum}
Probab=38.99 E-value=11 Score=32.84 Aligned_cols=14 Identities=36% Similarity=0.418 Sum_probs=11.7
Q ss_pred CCeEEEEechhhHH
Q 047865 98 GKRLMLVGDSIHYN 111 (389)
Q Consensus 98 gk~l~FVGDSl~Rn 111 (389)
..+|+|+|||++..
T Consensus 5 ~~~i~~~GDSit~G 18 (215)
T 2vpt_A 5 TIKIMPVGDSCTEG 18 (215)
T ss_dssp EEEEEEEESHHHHT
T ss_pred ceEEEecccccccC
Confidence 35799999999874
No 18
>1fll_X B-cell surface antigen CD40; TRAF3 with CD40 peptide, TNF signaling, apoptosis; 3.50A {Homo sapiens}
Probab=38.08 E-value=17 Score=21.75 Aligned_cols=11 Identities=27% Similarity=0.295 Sum_probs=9.2
Q ss_pred CCCcccccCCC
Q 047865 362 YADCLHWCLPG 372 (389)
Q Consensus 362 ~~DClHWCLPG 372 (389)
.+|-+|||+|-
T Consensus 6 vqeTl~~~qPV 16 (26)
T 1fll_X 6 VQETLHGSQPV 16 (26)
T ss_dssp CCCCCCCSSSC
T ss_pred hhHHhhcCccc
Confidence 47999999983
No 19
>2w9x_A AXE2A, CJCE2B, putative acetyl xylan esterase; carbohydrate esterase family 2, hydrolase; 2.00A {Cellvibrio japonicus}
Probab=35.37 E-value=14 Score=35.54 Aligned_cols=74 Identities=14% Similarity=0.046 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcceEEEeecCCCCcccCCCCCCCCCCCCCccccCCCCccccccCCcHHHHHHHHHHHh
Q 047865 238 YTVYEKTLRAWGKWVEENVNPNLTSVFFSSAAPKHVRSSDRNNVNGVKCVEETTPIFNRTTRLEVGTNQQLFAIAANVTQ 317 (389)
Q Consensus 238 ~~ay~~al~t~~~~v~~~~~~~~~~vffRt~SP~Hf~~g~Wn~~~gG~C~~~T~P~~~~~~~~~~~~~~~~~~i~~~~~~ 317 (389)
.+.|+..++.+++.+.+.. .++.|++-+. |... + + + ...+.+++++..+
T Consensus 266 ~~~~~~~l~~li~~ir~~~--p~a~Iil~~p-p~~~--~---------~------~-----------~~~i~~~~~~~~~ 314 (366)
T 2w9x_A 266 HADYVANYVKFVKQLHSNN--ARAQFILMNS-DQSN--G---------E------I-----------AEQVGKVVAQLKG 314 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHC--TTCEEEEEEE-SCGG--G---------H------H-----------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHC--CCCeEEEEeC-CCcC--c---------h------H-----------HHHHHHHHHHHHh
Confidence 4678888888888876642 3456666652 3220 0 0 1 1123344443333
Q ss_pred cCCcceEEeeccccccccccCCCCC
Q 047865 318 SMEVPVHFLNITSLSEYRKDAHTSV 342 (389)
Q Consensus 318 ~~~~~v~lLDIT~ls~~R~DgHps~ 342 (389)
....++.++|+.....+-.|-||+.
T Consensus 315 ~~~~~v~~vd~~~~~~~~dd~HPn~ 339 (366)
T 2w9x_A 315 GGLHQVEQIVFKGLDYSGCHWHPSA 339 (366)
T ss_dssp TTCCCEEEEEECCCCCCBGGGBCCH
T ss_pred cCCCcEEEEEccCCCCCCCCCCcCH
Confidence 3346899999865444555677764
No 20
>2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate binding, plant cell WALL degradation, hydrolase, cellulases; 1.80A {Cellvibrio japonicus}
Probab=34.02 E-value=13 Score=35.63 Aligned_cols=28 Identities=11% Similarity=0.191 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcceEEEee
Q 047865 238 YTVYEKTLRAWGKWVEENVNPNLTSVFFSS 267 (389)
Q Consensus 238 ~~ay~~al~t~~~~v~~~~~~~~~~vffRt 267 (389)
.+.|+..++.+++.+.+.. .++.|++-+
T Consensus 245 ~~~~~~~l~~li~~ir~~~--p~~~I~l~~ 272 (347)
T 2waa_A 245 RATYINTYTRFVRTLLDNH--PQATIVLTE 272 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHC--TTCEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHC--CCCEEEEEe
Confidence 3567777777777776542 355677654
No 21
>3t6g_B Breast cancer anti-estrogen resistance protein 1; CDC25-homology domain, GTPase exchange factor, focal-adhesio targeting domain, signaling protein; 2.50A {Homo sapiens}
Probab=33.87 E-value=2.3 Score=38.94 Aligned_cols=17 Identities=24% Similarity=0.598 Sum_probs=14.3
Q ss_pred HhcCCeEEEEechhhHH
Q 047865 95 KLRGKRLMLVGDSIHYN 111 (389)
Q Consensus 95 ~lrgk~l~FVGDSl~Rn 111 (389)
.|-+.+++||||.|.|+
T Consensus 143 IlsAHKLVfIGDTL~r~ 159 (229)
T 3t6g_B 143 ILSAHKLVFIGDTLSRQ 159 (229)
T ss_dssp HHHHHHHHHHHHHHHHS
T ss_pred EEEeeeeeeecchHHHh
Confidence 45677899999999985
No 22
>2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A*
Probab=32.85 E-value=14 Score=35.10 Aligned_cols=28 Identities=14% Similarity=0.079 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcceEEEee
Q 047865 238 YTVYEKTLRAWGKWVEENVNPNLTSVFFSS 267 (389)
Q Consensus 238 ~~ay~~al~t~~~~v~~~~~~~~~~vffRt 267 (389)
.+.|+..++.+++.+.+.. .++.|++-+
T Consensus 233 ~~~~~~~l~~li~~ir~~~--p~a~Iil~~ 260 (341)
T 2wao_A 233 KTKFVTAYKNLISEVRRNY--PDAHIFCCV 260 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHC--TTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHC--CCCeEEEEe
Confidence 3567777777777776542 345677666
No 23
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A*
Probab=29.33 E-value=18 Score=32.24 Aligned_cols=12 Identities=33% Similarity=0.437 Sum_probs=10.7
Q ss_pred eEEEEechhhHH
Q 047865 100 RLMLVGDSIHYN 111 (389)
Q Consensus 100 ~l~FVGDSl~Rn 111 (389)
+|+|+|||++..
T Consensus 2 ~I~~~GDS~t~g 13 (233)
T 1k7c_A 2 TVYLAGDSTMAK 13 (233)
T ss_dssp EEEEECCTTTST
T ss_pred EEEEEecCCCcC
Confidence 699999999885
No 24
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8
Probab=26.82 E-value=24 Score=34.26 Aligned_cols=15 Identities=27% Similarity=0.401 Sum_probs=13.0
Q ss_pred cCCeEEEEechhhHH
Q 047865 97 RGKRLMLVGDSIHYN 111 (389)
Q Consensus 97 rgk~l~FVGDSl~Rn 111 (389)
.+++|+|+|||++..
T Consensus 161 ~~~~Iv~lGDSiT~G 175 (375)
T 2o14_A 161 TNRTIYVGGDSTVCN 175 (375)
T ss_dssp CCCEEEEEECTTTSC
T ss_pred CCcEEEEecCccccC
Confidence 567999999999876
No 25
>1vcc_A DNA topoisomerase I; DNA binding; HET: DNA; 1.60A {Vaccinia virus} SCOP: d.121.1.1
Probab=26.62 E-value=9.4 Score=28.74 Aligned_cols=15 Identities=47% Similarity=0.711 Sum_probs=10.8
Q ss_pred CeEEEEe-chhhHHHH
Q 047865 99 KRLMLVG-DSIHYNQW 113 (389)
Q Consensus 99 k~l~FVG-DSl~Rnq~ 113 (389)
.+|+||| ||-+|-||
T Consensus 55 ~~lIfvG~DSKgrkQY 70 (77)
T 1vcc_A 55 TRLIFVGSDSKGRRQY 70 (77)
T ss_dssp TSEEEEEECTTSCEEE
T ss_pred CceEEEeecCCCceee
Confidence 3499999 77776554
No 26
>3skv_A SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydrolase fold, trans; 2.49A {Streptomyces SP}
Probab=25.65 E-value=23 Score=34.79 Aligned_cols=14 Identities=29% Similarity=0.290 Sum_probs=11.9
Q ss_pred CCeEEEEechhhHH
Q 047865 98 GKRLMLVGDSIHYN 111 (389)
Q Consensus 98 gk~l~FVGDSl~Rn 111 (389)
.++|+|+|||++..
T Consensus 185 ~~~Iv~~GDSiT~G 198 (385)
T 3skv_A 185 KPHWIHYGDSICHG 198 (385)
T ss_dssp CCEEEEEECSSCTT
T ss_pred CceEEEEeccccCC
Confidence 68899999999753
No 27
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=25.05 E-value=38 Score=32.30 Aligned_cols=25 Identities=16% Similarity=0.175 Sum_probs=20.7
Q ss_pred hc-CCeEEEEechhhHHHHHHHHHhhhh
Q 047865 96 LR-GKRLMLVGDSIHYNQWQSLVCMVQS 122 (389)
Q Consensus 96 lr-gk~l~FVGDSl~Rnq~~SL~ClL~~ 122 (389)
++ |++|+|||| . -|...|++.++..
T Consensus 143 l~~gl~va~vGD-~-~~va~Sl~~~~~~ 168 (307)
T 3tpf_A 143 QNGIAKVAFIGD-S-NNMCNSWLITAAI 168 (307)
T ss_dssp GGGCCEEEEESC-S-SHHHHHHHHHHHH
T ss_pred CCCCCEEEEEcC-C-CccHHHHHHHHHH
Confidence 46 999999999 3 5688899988865
No 28
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=23.08 E-value=41 Score=32.09 Aligned_cols=27 Identities=19% Similarity=0.223 Sum_probs=22.4
Q ss_pred hcCCeEEEEechhhHHHHHHHHHhhhh
Q 047865 96 LRGKRLMLVGDSIHYNQWQSLVCMVQS 122 (389)
Q Consensus 96 lrgk~l~FVGDSl~Rnq~~SL~ClL~~ 122 (389)
++|.+|+||||-..-|...||+.++..
T Consensus 145 l~glkva~vGD~~~~rva~Sl~~~~~~ 171 (304)
T 3r7f_A 145 FKGLTVSIHGDIKHSRVARSNAEVLTR 171 (304)
T ss_dssp CTTCEEEEESCCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCcchHHHHHHHHHH
Confidence 479999999997666788899888865
No 29
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=23.05 E-value=40 Score=32.53 Aligned_cols=27 Identities=22% Similarity=0.304 Sum_probs=22.7
Q ss_pred HhcCCeEEEEechhhHHHHHHHHHhhhh
Q 047865 95 KLRGKRLMLVGDSIHYNQWQSLVCMVQS 122 (389)
Q Consensus 95 ~lrgk~l~FVGDSl~Rnq~~SL~ClL~~ 122 (389)
.+.|++|+||||-.+ |...||+.++..
T Consensus 158 ~l~gl~va~vGD~~~-~va~Sl~~~~~~ 184 (328)
T 3grf_A 158 GFKGIKFAYCGDSMN-NVTYDLMRGCAL 184 (328)
T ss_dssp TGGGCCEEEESCCSS-HHHHHHHHHHHH
T ss_pred ccCCcEEEEeCCCCc-chHHHHHHHHHH
Confidence 467899999999766 688999988865
No 30
>2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis}
Probab=22.92 E-value=67 Score=28.60 Aligned_cols=23 Identities=17% Similarity=0.047 Sum_probs=19.3
Q ss_pred CCeEEEEechhhHHHHHHHHHhh
Q 047865 98 GKRLMLVGDSIHYNQWQSLVCMV 120 (389)
Q Consensus 98 gk~l~FVGDSl~Rnq~~SL~ClL 120 (389)
..+|+++|||.+-+.-..++..+
T Consensus 95 ~~~i~l~G~SaGG~lA~~~a~~~ 117 (274)
T 2qru_A 95 NQSFGLCGRSAGGYLMLQLTKQL 117 (274)
T ss_dssp TCCEEEEEETHHHHHHHHHHHHH
T ss_pred CCcEEEEEECHHHHHHHHHHHHH
Confidence 67899999999999888777544
No 31
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=22.45 E-value=45 Score=32.65 Aligned_cols=26 Identities=23% Similarity=0.294 Sum_probs=21.7
Q ss_pred hcCCeEEEEechhhHHHHHHHHHhhhh
Q 047865 96 LRGKRLMLVGDSIHYNQWQSLVCMVQS 122 (389)
Q Consensus 96 lrgk~l~FVGDSl~Rnq~~SL~ClL~~ 122 (389)
++|++|+||||-.+ |.-.||+.++..
T Consensus 178 l~glkva~vGD~~n-nva~Sl~~~~~~ 203 (365)
T 4amu_A 178 LKNKKIVFIGDYKN-NVGVSTMIGAAF 203 (365)
T ss_dssp CTTCEEEEESSTTS-HHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCc-chHHHHHHHHHH
Confidence 57999999999766 588899888864
No 32
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=21.06 E-value=49 Score=32.79 Aligned_cols=27 Identities=19% Similarity=0.290 Sum_probs=20.4
Q ss_pred hcCCeEEEEec---hhhH--HHHHHHHHhhhh
Q 047865 96 LRGKRLMLVGD---SIHY--NQWQSLVCMVQS 122 (389)
Q Consensus 96 lrgk~l~FVGD---Sl~R--nq~~SL~ClL~~ 122 (389)
|+|++|+|||| |.+| |...|++.++..
T Consensus 189 l~Glkva~vgd~~~~~G~~nnVa~Sli~~~~~ 220 (399)
T 3q98_A 189 LKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTR 220 (399)
T ss_dssp GTTCEEEEECCCCSSCCCCTHHHHHHHHHHGG
T ss_pred cCCCEEEEEEecccccCcchHHHHHHHHHHHH
Confidence 46779999988 3344 778899887764
No 33
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=20.24 E-value=52 Score=31.41 Aligned_cols=28 Identities=21% Similarity=0.176 Sum_probs=22.8
Q ss_pred hcCCeEEEEechhhHHHHHHHHHhhhhc
Q 047865 96 LRGKRLMLVGDSIHYNQWQSLVCMVQSV 123 (389)
Q Consensus 96 lrgk~l~FVGDSl~Rnq~~SL~ClL~~~ 123 (389)
+.|++|++|||-..-|...||+..+..-
T Consensus 152 l~gl~va~vGD~~~~rva~Sl~~~~~~~ 179 (310)
T 3csu_A 152 LDNLHVAMVGDLKYGRTVHSLTQALAKF 179 (310)
T ss_dssp SSSCEEEEESCTTTCHHHHHHHHHHHTS
T ss_pred cCCcEEEEECCCCCCchHHHHHHHHHhC
Confidence 4789999999966557889999888753
Done!