Query 047869
Match_columns 2233
No_of_seqs 157 out of 219
Neff 3.2
Searched_HMMs 29240
Date Mon Mar 25 06:26:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047869.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047869hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3f3f_A Nucleoporin SEH1; struc 98.5 0.00018 6E-09 75.9 29.9 170 1865-2037 13-198 (351)
2 4a11_B DNA excision repair pro 98.4 0.00067 2.3E-08 74.3 34.3 300 1818-2145 55-365 (408)
3 1gxr_A ESG1, transducin-like e 98.3 0.0022 7.4E-08 68.4 33.9 272 1817-2142 61-334 (337)
4 2oit_A Nucleoporin 214KDA; NH2 98.1 0.0022 7.4E-08 75.6 31.7 206 1812-2031 40-261 (434)
5 1gxr_A ESG1, transducin-like e 98.1 0.0038 1.3E-07 66.6 30.5 243 1863-2143 51-294 (337)
6 3jrp_A Fusion protein of prote 98.1 0.0022 7.4E-08 69.6 28.9 162 1865-2039 13-190 (379)
7 3ei3_B DNA damage-binding prot 98.1 0.011 3.7E-07 65.7 34.1 194 1820-2041 87-283 (383)
8 3zwl_B Eukaryotic translation 98.0 0.018 6.1E-07 62.0 32.8 191 1815-2040 39-249 (369)
9 1k8k_C P40, ARP2/3 complex 41 97.9 0.023 7.7E-07 61.9 33.3 289 1818-2142 19-358 (372)
10 3i2n_A WD repeat-containing pr 97.9 0.004 1.4E-07 67.1 26.7 168 1862-2040 17-199 (357)
11 1r5m_A SIR4-interacting protei 97.9 0.0076 2.6E-07 66.2 29.0 235 1865-2143 110-359 (425)
12 3mmy_A MRNA export factor; mRN 97.9 0.0074 2.5E-07 65.0 27.9 157 1864-2041 40-200 (368)
13 3pbp_A Nucleoporin NUP82; beta 97.8 0.00013 4.3E-09 88.6 14.6 158 1808-1983 21-207 (452)
14 1xip_A Nucleoporin NUP159; bet 97.8 0.0033 1.1E-07 75.0 26.0 187 1811-2031 40-234 (388)
15 3odt_A Protein DOA1; ubiquitin 97.8 0.023 8E-07 60.1 29.4 190 1810-2039 21-213 (313)
16 4a11_B DNA excision repair pro 97.8 0.0081 2.8E-07 65.8 26.7 165 1864-2042 44-220 (408)
17 4ery_A WD repeat-containing pr 97.8 0.073 2.5E-06 57.6 34.2 185 1819-2039 35-222 (312)
18 3i2n_A WD repeat-containing pr 97.7 0.019 6.7E-07 61.8 28.4 159 1863-2038 65-241 (357)
19 3k26_A Polycomb protein EED; W 97.7 0.026 8.9E-07 60.9 28.8 163 1865-2039 20-191 (366)
20 2xyi_A Probable histone-bindin 97.7 0.019 6.4E-07 66.2 29.0 204 1820-2039 142-352 (430)
21 1k8k_C P40, ARP2/3 complex 41 97.7 0.02 6.9E-07 62.3 27.6 161 1865-2039 10-172 (372)
22 3mkq_A Coatomer beta'-subunit; 97.6 0.016 5.3E-07 70.8 28.9 241 1865-2144 15-258 (814)
23 1ri6_A Putative isomerase YBHE 97.6 0.035 1.2E-06 59.5 28.2 197 1819-2042 4-211 (343)
24 1yfq_A Cell cycle arrest prote 97.6 0.027 9.3E-07 60.7 26.9 162 1865-2040 13-179 (342)
25 2ymu_A WD-40 repeat protein; u 97.6 0.037 1.3E-06 64.7 29.8 109 1865-1986 18-127 (577)
26 3dwl_C Actin-related protein 2 97.6 0.031 1.1E-06 61.7 27.3 201 1818-2040 22-236 (377)
27 3fm0_A Protein CIAO1; WDR39,SG 97.5 0.026 8.7E-07 63.2 26.8 159 1865-2038 18-179 (345)
28 3mkq_A Coatomer beta'-subunit; 97.5 0.047 1.6E-06 66.7 30.7 191 1815-2039 20-216 (814)
29 2pm7_B Protein transport prote 97.5 0.097 3.3E-06 57.2 29.9 118 1865-1988 11-132 (297)
30 3zwl_B Eukaryotic translation 97.5 0.096 3.3E-06 56.5 29.1 164 1864-2040 33-206 (369)
31 3jrp_A Fusion protein of prote 97.5 0.076 2.6E-06 57.6 28.5 198 1818-2038 22-238 (379)
32 1ri6_A Putative isomerase YBHE 97.5 0.044 1.5E-06 58.8 26.4 206 1814-2040 43-262 (343)
33 3jro_A Fusion protein of prote 97.5 0.011 3.7E-07 74.0 24.8 163 1865-2040 11-189 (753)
34 2aq5_A Coronin-1A; WD40 repeat 97.4 0.02 6.9E-07 64.6 24.4 203 1813-2039 39-253 (402)
35 4e54_B DNA damage-binding prot 97.4 0.021 7.3E-07 65.7 24.9 194 1819-2040 132-327 (435)
36 2pm9_A Protein WEB1, protein t 97.4 0.036 1.2E-06 61.5 25.7 190 1826-2038 43-247 (416)
37 2pm9_A Protein WEB1, protein t 97.4 0.014 4.9E-07 64.6 22.5 169 1865-2040 14-197 (416)
38 4g56_B MGC81050 protein; prote 97.4 0.046 1.6E-06 61.9 26.7 160 1862-2036 41-209 (357)
39 1sq9_A Antiviral protein SKI8; 97.4 0.12 4E-06 57.2 29.2 201 1820-2039 27-266 (397)
40 4aez_A CDC20, WD repeat-contai 97.4 0.13 4.5E-06 58.3 29.8 274 1814-2143 99-378 (401)
41 1erj_A Transcriptional repress 97.4 0.092 3.1E-06 59.8 28.6 157 1865-2039 125-286 (393)
42 1pgu_A Actin interacting prote 97.4 0.15 5.2E-06 59.5 30.9 200 1814-2039 24-237 (615)
43 1pgu_A Actin interacting prote 97.3 0.064 2.2E-06 62.6 27.5 197 1818-2039 77-282 (615)
44 2vdu_B TRNA (guanine-N(7)-)-me 97.3 0.44 1.5E-05 55.1 33.9 161 1865-2039 104-270 (450)
45 2ynn_A Coatomer subunit beta'; 97.3 0.11 3.6E-06 57.1 27.1 154 1865-2039 15-171 (304)
46 1sq9_A Antiviral protein SKI8; 97.3 0.084 2.9E-06 58.3 26.2 170 1865-2040 18-216 (397)
47 2aq5_A Coronin-1A; WD40 repeat 97.3 0.078 2.7E-06 59.8 26.4 166 1864-2040 35-207 (402)
48 3vl1_A 26S proteasome regulato 97.3 0.38 1.3E-05 53.7 32.0 190 1818-2041 108-323 (420)
49 1got_B GT-beta; complex (GTP-b 97.2 0.39 1.3E-05 53.5 32.3 187 1819-2039 67-256 (340)
50 3hfq_A Uncharacterized protein 97.2 0.17 5.7E-06 55.7 27.9 206 1813-2039 44-270 (347)
51 3sfz_A APAF-1, apoptotic pepti 97.2 0.07 2.4E-06 69.0 28.3 279 1818-2143 626-911 (1249)
52 1r5m_A SIR4-interacting protei 97.2 0.045 1.5E-06 60.2 22.9 150 1866-2039 209-360 (425)
53 4g56_B MGC81050 protein; prote 97.2 0.17 5.8E-06 57.3 28.0 239 1866-2143 97-341 (357)
54 2pbi_B Guanine nucleotide-bind 97.1 0.36 1.2E-05 54.5 29.9 192 1818-2039 75-270 (354)
55 3iz6_a 40S ribosomal protein R 97.1 0.1 3.5E-06 59.2 25.6 192 1819-2039 78-279 (380)
56 1l0q_A Surface layer protein; 97.1 0.43 1.5E-05 53.0 29.5 152 1865-2039 33-188 (391)
57 4aez_A CDC20, WD repeat-contai 97.1 0.19 6.4E-06 57.1 27.2 235 1867-2143 97-334 (401)
58 2xyi_A Probable histone-bindin 97.1 0.037 1.3E-06 63.7 21.7 205 1820-2039 195-409 (430)
59 4ery_A WD repeat-containing pr 97.0 0.5 1.7E-05 51.2 29.0 153 1865-2039 25-179 (312)
60 1vyh_C Platelet-activating fac 97.0 0.49 1.7E-05 54.5 30.3 142 1819-1987 120-264 (410)
61 3vl1_A 26S proteasome regulato 97.0 0.47 1.6E-05 53.1 29.3 279 1820-2144 69-364 (420)
62 3gre_A Serine/threonine-protei 97.0 0.1 3.4E-06 59.2 24.2 163 1865-2039 65-244 (437)
63 3gre_A Serine/threonine-protei 97.0 0.34 1.2E-05 54.9 28.2 196 1819-2039 76-291 (437)
64 1got_B GT-beta; complex (GTP-b 97.0 0.67 2.3E-05 51.6 29.8 154 1865-2039 57-214 (340)
65 3odt_A Protein DOA1; ubiquitin 97.0 0.47 1.6E-05 50.2 27.3 148 1865-2037 20-171 (313)
66 3dw8_B Serine/threonine-protei 96.9 0.11 3.8E-06 58.4 23.3 170 1865-2041 30-259 (447)
67 4aow_A Guanine nucleotide-bind 96.9 0.41 1.4E-05 51.4 26.7 118 1865-1987 40-158 (340)
68 1yfq_A Cell cycle arrest prote 96.8 0.45 1.5E-05 51.4 26.1 190 1818-2041 22-226 (342)
69 4gqb_B Methylosome protein 50; 96.8 0.71 2.4E-05 52.6 29.1 158 1865-2038 84-244 (344)
70 2ymu_A WD-40 repeat protein; u 96.8 0.47 1.6E-05 55.5 28.2 150 1864-2037 345-495 (577)
71 2vdu_B TRNA (guanine-N(7)-)-me 96.8 1 3.6E-05 52.0 30.1 119 1912-2039 104-228 (450)
72 3k26_A Polycomb protein EED; W 96.7 0.55 1.9E-05 50.7 26.1 146 1820-1988 86-260 (366)
73 3hfq_A Uncharacterized protein 96.7 0.88 3E-05 50.1 28.1 161 1867-2042 43-220 (347)
74 3dwl_C Actin-related protein 2 96.7 0.086 2.9E-06 58.2 20.2 161 1865-2039 13-176 (377)
75 3ny3_A E3 ubiquitin-protein li 96.7 0.0013 4.5E-08 63.2 4.9 48 1602-1649 14-63 (75)
76 3fm0_A Protein CIAO1; WDR39,SG 96.7 1.2 4E-05 49.9 31.2 197 1814-2038 22-223 (345)
77 3scy_A Hypothetical bacterial 96.7 1.1 3.9E-05 49.6 30.3 166 1865-2042 101-293 (361)
78 3sfz_A APAF-1, apoptotic pepti 96.7 0.25 8.6E-06 64.0 26.7 158 1863-2040 615-774 (1249)
79 3u4y_A Uncharacterized protein 96.6 0.088 3E-06 57.0 19.1 200 1814-2039 89-303 (331)
80 3f3f_A Nucleoporin SEH1; struc 96.6 0.9 3.1E-05 48.0 27.6 128 1910-2041 11-144 (351)
81 3bws_A Protein LP49; two-domai 96.6 0.88 3E-05 51.2 27.5 119 1861-1987 120-242 (433)
82 3v7d_B Cell division control p 96.6 0.97 3.3E-05 51.7 27.9 104 1875-1988 131-236 (464)
83 1p22_A F-BOX/WD-repeat protein 96.6 1.4 4.8E-05 50.5 29.3 177 1819-2038 143-323 (435)
84 3v7d_B Cell division control p 96.5 1.6 5.6E-05 49.8 30.8 187 1819-2039 132-340 (464)
85 1erj_A Transcriptional repress 96.5 0.89 3E-05 51.8 27.2 155 1865-2038 66-236 (393)
86 4gqb_B Methylosome protein 50; 96.5 0.28 9.6E-06 55.8 23.0 189 1818-2039 138-330 (344)
87 3dm0_A Maltose-binding peripla 96.5 1.3 4.3E-05 54.5 30.2 161 1865-2038 384-548 (694)
88 4aow_A Guanine nucleotide-bind 96.5 0.92 3.2E-05 48.7 25.7 127 1899-2038 25-157 (340)
89 3nis_A E3 ubiquitin-protein li 96.4 0.0024 8.2E-08 62.4 4.5 64 1589-1656 9-78 (82)
90 3jro_A Fusion protein of prote 96.4 0.47 1.6E-05 59.6 25.8 200 1818-2040 20-238 (753)
91 3ow8_A WD repeat-containing pr 96.4 1.8 6E-05 48.4 27.8 153 1865-2039 82-236 (321)
92 2oit_A Nucleoporin 214KDA; NH2 96.3 1.1 3.8E-05 52.9 27.3 157 1818-1990 103-280 (434)
93 3bg1_A Protein SEC13 homolog; 96.3 1.1 3.9E-05 49.4 25.5 119 1865-1988 15-136 (316)
94 3dw8_B Serine/threonine-protei 96.2 0.72 2.5E-05 51.9 23.9 170 1864-2040 178-373 (447)
95 1nr0_A Actin interacting prote 96.2 3.6 0.00012 50.0 32.3 283 1814-2144 65-354 (611)
96 3ei3_B DNA damage-binding prot 96.2 0.98 3.4E-05 50.2 24.3 117 1910-2038 73-192 (383)
97 2hes_X YDR267CP; beta-propelle 96.2 2.2 7.5E-05 47.5 27.1 161 1865-2038 60-228 (330)
98 3mmy_A MRNA export factor; mRN 96.0 1.5 5E-05 47.3 24.1 203 1910-2145 39-247 (368)
99 1jof_A Carboxy-CIS,CIS-muconat 96.0 2.9 9.8E-05 47.2 28.6 201 1813-2031 44-276 (365)
100 3u4y_A Uncharacterized protein 95.9 2.5 8.5E-05 45.8 26.9 155 1868-2039 44-206 (331)
101 3ow8_A WD repeat-containing pr 95.9 1.7 5.7E-05 48.6 24.5 155 1865-2039 34-194 (321)
102 2hes_X YDR267CP; beta-propelle 95.8 3.1 0.0001 46.3 27.8 159 1865-2038 16-182 (330)
103 4gga_A P55CDC, cell division c 95.8 3.3 0.00011 47.4 27.2 144 1876-2040 116-261 (420)
104 1l0q_A Surface layer protein; 95.7 1.1 3.6E-05 49.8 22.1 188 1813-2038 36-231 (391)
105 2j04_A TAU60, YPL007P, hypothe 95.7 0.25 8.5E-06 62.3 18.9 183 1818-2032 96-290 (588)
106 3scy_A Hypothetical bacterial 95.7 3.4 0.00012 45.8 29.8 163 1868-2039 54-241 (361)
107 2ojh_A Uncharacterized protein 95.7 2.4 8.3E-05 43.9 23.4 182 1818-2030 52-237 (297)
108 1vyh_C Platelet-activating fac 95.5 2.3 8E-05 48.9 24.6 153 1864-2038 109-263 (410)
109 2pbi_B Guanine nucleotide-bind 95.5 3.8 0.00013 46.2 25.7 155 1865-2038 156-313 (354)
110 4gga_A P55CDC, cell division c 95.4 5.1 0.00017 45.9 32.3 151 1812-1988 109-261 (420)
111 2ovr_B FBW7, F-BOX/WD repeat p 95.4 5.2 0.00018 45.8 32.5 258 1819-2143 129-389 (445)
112 3iz6_a 40S ribosomal protein R 95.3 2.7 9.1E-05 47.7 23.8 205 1818-2038 119-327 (380)
113 4e54_B DNA damage-binding prot 95.2 0.74 2.5E-05 53.0 19.4 117 1912-2038 121-238 (435)
114 3frx_A Guanine nucleotide-bind 95.0 5.5 0.00019 44.1 29.1 116 1865-1987 19-137 (319)
115 4ggc_A P55CDC, cell division c 95.0 4.5 0.00015 43.1 27.7 158 1812-1986 29-228 (318)
116 2ynn_A Coatomer subunit beta'; 95.0 5.2 0.00018 43.8 29.5 149 1815-1988 20-172 (304)
117 2xzm_R RACK1; ribosome, transl 94.9 5.6 0.00019 44.2 24.5 149 1865-2038 78-242 (343)
118 3dm0_A Maltose-binding peripla 94.9 6.2 0.00021 48.5 27.1 180 1819-2031 442-624 (694)
119 1nir_A Nitrite reductase; hemo 94.8 3.5 0.00012 50.4 24.4 76 1813-1902 183-264 (543)
120 3bws_A Protein LP49; two-domai 94.7 6.3 0.00022 44.4 24.4 187 1814-2038 217-430 (433)
121 3lrv_A PRE-mRNA-splicing facto 94.4 7.7 0.00026 43.0 24.8 182 1820-2038 49-242 (343)
122 2j04_B YDR362CP, TAU91; beta p 94.4 2.2 7.5E-05 52.2 21.4 120 1865-1987 209-341 (524)
123 1nir_A Nitrite reductase; hemo 94.4 13 0.00045 45.4 29.5 183 1816-2035 145-350 (543)
124 3lrv_A PRE-mRNA-splicing facto 94.2 7.5 0.00026 43.1 23.5 160 1865-2039 127-291 (343)
125 4gq1_A NUP37; propeller, trans 94.2 10 0.00034 43.5 26.1 117 1866-1988 91-218 (393)
126 1nr0_A Actin interacting prote 94.2 14 0.00047 45.0 31.8 191 1813-2039 23-220 (611)
127 2j04_A TAU60, YPL007P, hypothe 94.1 6.8 0.00023 49.7 25.3 229 1885-2144 53-296 (588)
128 4h5i_A Guanine nucleotide-exch 94.0 2.8 9.4E-05 47.8 19.9 196 1813-2040 138-343 (365)
129 4h5i_A Guanine nucleotide-exch 93.9 6.1 0.00021 45.0 22.6 156 1866-2037 136-297 (365)
130 4ggc_A P55CDC, cell division c 93.8 8.1 0.00028 41.1 28.1 148 1869-2039 31-180 (318)
131 3vgz_A Uncharacterized protein 93.4 3.5 0.00012 44.7 18.6 184 1814-2032 146-336 (353)
132 2j04_B YDR362CP, TAU91; beta p 93.1 7.2 0.00025 47.8 22.6 122 1862-1988 132-296 (524)
133 2oaj_A Protein SNI1; WD40 repe 93.0 18 0.00062 47.0 27.3 194 1814-2040 23-242 (902)
134 2ovr_B FBW7, F-BOX/WD repeat p 93.0 16 0.00054 41.9 28.5 264 1819-2146 169-443 (445)
135 3vu4_A KMHSV2; beta-propeller 92.9 15 0.00051 41.5 29.4 184 1818-2038 30-225 (355)
136 1pby_B Quinohemoprotein amine 92.9 12 0.0004 40.1 22.5 112 1866-1987 36-162 (337)
137 2oaj_A Protein SNI1; WD40 repe 92.7 8.5 0.00029 50.0 23.7 164 1866-2040 438-661 (902)
138 2xzm_R RACK1; ribosome, transl 92.6 15 0.00052 40.8 30.3 116 1866-1987 24-148 (343)
139 3vu4_A KMHSV2; beta-propeller 92.5 1.4 4.8E-05 49.7 14.4 163 1820-1989 148-337 (355)
140 1jof_A Carboxy-CIS,CIS-muconat 92.4 17 0.00058 41.0 24.3 164 1865-2039 146-340 (365)
141 2pm7_B Protein transport prote 92.0 16 0.00056 39.8 25.5 121 1910-2040 9-132 (297)
142 1p22_A F-BOX/WD-repeat protein 91.7 23 0.00078 40.7 27.6 148 1865-2039 135-284 (435)
143 2ojh_A Uncharacterized protein 91.5 4.9 0.00017 41.6 15.9 156 1865-2038 43-202 (297)
144 3frx_A Guanine nucleotide-bind 90.7 23 0.0008 39.1 24.6 116 1910-2038 17-136 (319)
145 2z3z_A Dipeptidyl aminopeptida 90.5 31 0.0011 42.0 24.0 97 1816-1930 89-199 (706)
146 2z3z_A Dipeptidyl aminopeptida 89.6 45 0.0015 40.7 28.3 147 1866-2030 183-376 (706)
147 4gq1_A NUP37; propeller, trans 89.5 17 0.0006 41.5 19.7 115 1865-1987 138-285 (393)
148 3sjl_D Methylamine dehydrogena 89.4 25 0.00087 42.3 21.7 195 1814-2040 39-256 (386)
149 2ecf_A Dipeptidyl peptidase IV 88.1 16 0.00055 44.7 19.2 155 1866-2038 211-411 (741)
150 1pby_B Quinohemoprotein amine 87.9 17 0.00059 38.8 17.2 110 1814-1942 39-164 (337)
151 3azo_A Aminopeptidase; POP fam 86.9 61 0.0021 39.2 23.0 169 1862-2042 128-325 (662)
152 3vgz_A Uncharacterized protein 86.7 39 0.0013 36.6 30.7 160 1866-2038 91-260 (353)
153 1qks_A Cytochrome CD1 nitrite 86.7 46 0.0016 41.5 22.4 179 1815-2029 162-361 (567)
154 3bg1_A Protein SEC13 homolog; 86.1 3 0.0001 46.1 10.3 199 1819-2038 71-291 (316)
155 2ecf_A Dipeptidyl peptidase IV 84.8 83 0.0028 38.6 23.1 130 1849-1987 20-180 (741)
156 2hqs_A Protein TOLB; TOLB, PAL 82.9 78 0.0027 36.8 26.5 151 1865-2038 180-340 (415)
157 3ei3_A DNA damage-binding prot 81.8 99 0.0034 42.1 23.7 242 1872-2143 436-722 (1158)
158 1xfd_A DIP, dipeptidyl aminope 81.8 51 0.0017 40.2 19.3 120 1910-2039 254-392 (723)
159 1jmx_B Amine dehydrogenase; ox 81.7 9.2 0.00032 41.2 11.6 148 1816-1986 7-173 (349)
160 1q7f_A NHL, brain tumor CG1071 81.3 52 0.0018 35.2 17.2 148 1813-1987 125-279 (286)
161 2xdw_A Prolyl endopeptidase; a 80.3 1.3E+02 0.0043 37.5 24.4 117 1864-1987 125-267 (710)
162 3c75_H MADH, methylamine dehyd 80.1 1.1E+02 0.0039 37.0 21.5 143 1817-1986 82-246 (426)
163 2w18_A PALB2, fancn, partner a 76.2 1.1E+02 0.0038 36.9 19.4 58 1884-1943 156-214 (356)
164 1qks_A Cytochrome CD1 nitrite 75.1 1.7E+02 0.006 36.5 22.0 192 1814-2029 202-459 (567)
165 4gq2_M Nucleoporin NUP120; bet 74.9 75 0.0026 42.1 19.2 105 1930-2035 80-195 (950)
166 1jmx_B Amine dehydrogenase; ox 74.8 62 0.0021 34.9 15.4 71 1866-1943 94-177 (349)
167 3e5z_A Putative gluconolactona 71.8 78 0.0027 34.2 15.4 108 1867-1987 175-285 (296)
168 3o4h_A Acylamino-acid-releasin 68.2 2E+02 0.007 34.4 23.4 140 1863-2030 21-170 (582)
169 3iuj_A Prolyl endopeptidase; h 66.9 2.6E+02 0.0088 35.0 24.7 115 1865-1987 130-267 (693)
170 3e5z_A Putative gluconolactona 66.7 1.4E+02 0.005 32.1 16.2 184 1812-2031 72-278 (296)
171 2bkl_A Prolyl endopeptidase; m 66.7 2E+02 0.0067 35.8 19.4 200 1864-2103 121-347 (695)
172 1pjx_A Dfpase, DIISOPROPYLFLUO 65.8 1.2E+02 0.004 32.6 15.1 115 1867-1988 175-299 (314)
173 3dsm_A Uncharacterized protein 65.0 1.6E+02 0.0056 33.0 16.7 179 1814-2028 89-285 (328)
174 3c5m_A Oligogalacturonate lyas 61.7 90 0.0031 34.4 13.6 77 1864-1943 188-275 (396)
175 2yvr_A Transcription intermedi 61.0 3.8 0.00013 35.5 2.2 29 1604-1636 17-45 (50)
176 2hqs_A Protein TOLB; TOLB, PAL 58.9 2.6E+02 0.009 32.5 29.1 137 1876-2033 143-291 (415)
177 3ddt_A E3 ubiquitin-protein li 58.1 5.3 0.00018 34.5 2.5 28 1605-1636 18-46 (48)
178 2ghs_A AGR_C_1268P; regucalcin 57.6 2.4E+02 0.0082 31.6 19.4 148 1867-2039 52-209 (326)
179 3pe7_A Oligogalacturonate lyas 57.0 59 0.002 36.0 11.2 79 1865-1946 189-278 (388)
180 2did_A Tripartite motif protei 56.9 6.1 0.00021 34.7 2.7 31 1603-1637 17-48 (53)
181 3fvz_A Peptidyl-glycine alpha- 55.1 2.6E+02 0.0088 31.2 19.9 119 1812-1940 94-226 (329)
182 1k32_A Tricorn protease; prote 54.8 4.8E+02 0.016 34.2 27.5 142 1865-2029 339-491 (1045)
183 2csv_A Tripartite motif protei 54.7 6.1 0.00021 36.7 2.5 29 1604-1636 28-56 (72)
184 2d8u_A Ubiquitin ligase TRIM63 54.3 3.5 0.00012 37.2 0.8 28 1605-1636 20-48 (64)
185 3pbp_A Nucleoporin NUP82; beta 52.7 98 0.0034 38.6 13.0 116 1919-2041 73-214 (452)
186 3g4e_A Regucalcin; six bladed 52.1 2.7E+02 0.0092 30.5 19.9 186 1814-2029 59-261 (297)
187 1yr2_A Prolyl oligopeptidase; 52.0 3.9E+02 0.013 33.6 18.5 175 1864-2057 163-364 (741)
188 2dja_A Midline-2; tripartite m 51.9 4.2 0.00015 38.5 1.0 29 1604-1636 29-58 (84)
189 3azo_A Aminopeptidase; POP fam 50.3 4.1E+02 0.014 32.1 22.8 156 1875-2040 89-272 (662)
190 3qqz_A Putative uncharacterize 49.4 2E+02 0.007 32.7 14.2 154 1814-1982 75-247 (255)
191 2yrg_A Tripartite motif-contai 48.1 10 0.00035 34.4 2.8 30 1604-1637 24-54 (59)
192 1xip_A Nucleoporin NUP159; bet 46.4 4E+02 0.014 32.0 16.7 112 1814-1954 93-204 (388)
193 3no2_A Uncharacterized protein 46.0 2.1E+02 0.0071 31.8 13.4 111 1864-1982 77-189 (276)
194 2gop_A Trilobed protease; beta 44.4 3.5E+02 0.012 29.5 15.2 65 1866-1940 106-206 (347)
195 2mad_H Methylamine dehydrogena 43.5 4.5E+02 0.015 30.6 30.1 152 1806-1986 20-194 (373)
196 2dg1_A DRP35, lactonase; beta 43.4 3.6E+02 0.012 29.4 15.6 115 1866-1989 184-317 (333)
197 2qc5_A Streptogramin B lactona 42.3 3.3E+02 0.011 28.7 20.1 146 1813-1986 66-216 (300)
198 1q7f_A NHL, brain tumor CG1071 40.7 3.6E+02 0.012 28.7 21.4 150 1813-1985 34-191 (286)
199 3dsm_A Uncharacterized protein 39.7 2.5E+02 0.0086 31.4 12.9 105 1818-1944 139-256 (328)
200 2ghs_A AGR_C_1268P; regucalcin 38.3 4.7E+02 0.016 29.3 14.9 104 1867-1978 182-292 (326)
201 2egm_A Tripartite motif-contai 36.9 12 0.00041 33.8 1.4 29 1603-1635 27-56 (57)
202 2dg1_A DRP35, lactonase; beta 35.4 4.7E+02 0.016 28.4 21.8 151 1814-1987 50-212 (333)
203 3pe7_A Oligogalacturonate lyas 34.7 2.6E+02 0.009 30.9 11.9 98 1869-1973 41-141 (388)
204 3c5m_A Oligogalacturonate lyas 34.6 5E+02 0.017 28.5 14.4 110 1863-1986 237-382 (396)
205 3qqz_A Putative uncharacterize 34.3 4.7E+02 0.016 29.8 14.1 74 1864-1943 27-102 (255)
206 4fhn_B Nucleoporin NUP120; pro 33.7 2.7E+02 0.0092 37.6 13.8 122 1910-2035 63-197 (1139)
207 1fre_A Nuclear factor XNF7; zi 33.4 7.7 0.00026 32.4 -0.4 27 1604-1634 13-40 (42)
208 3amr_A 3-phytase; beta-propell 32.3 7.5E+02 0.026 29.9 21.0 239 1888-2138 51-311 (355)
209 3ei3_A DNA damage-binding prot 30.5 1.2E+03 0.042 31.8 26.4 116 1863-1988 513-636 (1158)
210 3dr2_A Exported gluconolactona 30.0 5.8E+02 0.02 27.9 16.8 122 1886-2031 168-298 (305)
211 2ece_A 462AA long hypothetical 29.5 9.3E+02 0.032 30.1 20.6 155 1868-2035 142-346 (462)
212 3dr2_A Exported gluconolactona 29.3 3.4E+02 0.012 29.8 11.6 106 1867-1986 191-304 (305)
213 3fvz_A Peptidyl-glycine alpha- 28.0 6.6E+02 0.022 27.9 16.2 70 1866-1939 93-173 (329)
214 3g4e_A Regucalcin; six bladed 26.7 6.6E+02 0.022 27.5 26.4 152 1867-2042 16-182 (297)
215 1pjx_A Dfpase, DIISOPROPYLFLUO 25.6 6.4E+02 0.022 26.9 21.1 64 1865-1932 72-136 (314)
216 2mad_H Methylamine dehydrogena 24.5 8.8E+02 0.03 28.2 18.8 34 1868-1904 129-166 (373)
217 3o4h_A Acylamino-acid-releasin 23.3 1E+03 0.035 28.5 15.3 115 1914-2038 153-274 (582)
218 2oiz_A Aromatic amine dehydrog 23.1 8.8E+02 0.03 27.7 27.4 79 1862-1943 49-142 (361)
219 2w18_A PALB2, fancn, partner a 22.8 1.1E+03 0.037 28.6 22.6 116 1865-1987 88-211 (356)
220 1z68_A Fibroblast activation p 21.9 1.2E+03 0.04 28.6 25.5 70 1865-1943 61-141 (719)
221 2jun_A Midline-1; B-BOX, TRIM, 21.8 27 0.00094 33.8 1.1 29 1604-1636 70-99 (101)
222 3f7f_A Nucleoporin NUP120; nuc 20.6 4.2E+02 0.014 35.0 11.5 98 1934-2033 79-183 (729)
223 1k32_A Tricorn protease; prote 20.5 5.3E+02 0.018 33.8 12.7 102 1863-1977 378-491 (1045)
No 1
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.46 E-value=0.00018 Score=75.91 Aligned_cols=170 Identities=12% Similarity=0.143 Sum_probs=110.4
Q ss_pred EEEEeecccCccceEEeeccc-ceEEEEecCCCceeeeeeeeeccCCceEEEeEEecCC-CceEEEEecC-eEEEEeCcC
Q 047869 1865 EIVHLAFNSIVENYLTVAGYE-DCQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGS-PVQLMVVTNK-FVKIYDLSQ 1941 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGLk-DC~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGS-Qt~LAVVT~~-FVKIYDLS~ 1941 (2233)
.|..|+|+| ++++||++|.. .+.|..+...... -++.-.+.-....|..+.|.|.. ...|+..+.+ .|+|||+..
T Consensus 13 ~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~ 90 (351)
T 3f3f_A 13 LVHDVVYDF-YGRHVATCSSDQHIKVFKLDKDTSN-WELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDP 90 (351)
T ss_dssp CEEEEEECS-SSSEEEEEETTSEEEEEEECSSSCC-EEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECT
T ss_pred ceeEEEEcC-CCCEEEEeeCCCeEEEEECCCCCCc-ceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCC
Confidence 478999999 78899988864 4667777543322 12222222336679999999952 3457776665 899999987
Q ss_pred CCC-------CCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeec---ccccccCC
Q 047869 1942 DNI-------SPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQF---NDREIHAK 2011 (2233)
Q Consensus 1942 D~l-------SPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~---~~~q~~~~ 2011 (2233)
... .+...+.-..+.|.+++|-....| .+++..+.+|.|+.-++........+.+...... ........
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (351)
T 3f3f_A 91 DQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLG-LKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQS 169 (351)
T ss_dssp TSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCC
T ss_pred CcccccccCcceeeeecccCCceeEEEEcCCCCC-cEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccc
Confidence 654 346666667788998886543225 4677888999999998875443333333332221 11122344
Q ss_pred eEEEEeccc---cceeeEEecCCcEEEEE
Q 047869 2012 GLSLYFSST---YKLLFLSFQDGTTLVGR 2037 (2233)
Q Consensus 2012 GVSVyYS~t---l~LLF~SY~~G~Sf~a~ 2037 (2233)
..++.|++. -++|.++..+|..+.-.
T Consensus 170 ~~~~~~~p~~~~~~~l~~~~~~~~~~~~~ 198 (351)
T 3f3f_A 170 DFCLSWCPSRFSPEKLAVSALEQAIIYQR 198 (351)
T ss_dssp CEEEEECCCSSSCCEEEEEETTEEEEEEE
T ss_pred eeEEEeccCCCCCcEEEEecCCCcEEEEc
Confidence 667888886 77888888777765433
No 2
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.42 E-value=0.00067 Score=74.28 Aligned_cols=300 Identities=12% Similarity=0.049 Sum_probs=164.8
Q ss_pred cCceEEEe-eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeeccc-ceEEEEecCC
Q 047869 1818 SRGRLAVG-EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYE-DCQVLTLNPR 1895 (2233)
Q Consensus 1818 ~rGrLAVa-EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLk-DC~VLTfss~ 1895 (2233)
.+..+|.+ ..+.|.|+++..--....... ........-....-.-.|.+++|+|.++++||.+|.. .++|..+. .
T Consensus 55 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~ 131 (408)
T 4a11_B 55 EGRYMLSGGSDGVIVLYDLENSSRQSYYTC--KAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTN-T 131 (408)
T ss_dssp TCCEEEEEETTSCEEEEECCCCSSSSCEEE--CEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETT-T
T ss_pred CCCEEEEEcCCCeEEEEECCCCcccceEec--cccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCC-C
Confidence 34556655 788899999864222111000 0000000111122456789999999888899888754 35555543 2
Q ss_pred CceeeeeeeeeccCCceEEEeEEecCCCc--eEEEEecC-eEEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEE
Q 047869 1896 GEVTDRLAIELALQGAYIRRVDWVPGSPV--QLMVVTNK-FVKIYDLSQDNISPLHYFTLPDDMIVDATLVIASRGKMFL 1972 (2233)
Q Consensus 1896 GeV~DRL~LeL~Leg~fIIKa~WLPGSQt--~LAVVT~~-FVKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~I 1972 (2233)
|+....+. ....+..+.|.|.+.. .+++.+.+ .|+|||+... .+...+.-..+.|...+| .++|...+
T Consensus 132 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~--~~~~~~~~~~~~v~~~~~--~~~~~~ll 202 (408)
T 4a11_B 132 LQTADVFN-----FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSG--SCSHILQGHRQEILAVSW--SPRYDYIL 202 (408)
T ss_dssp TEEEEEEE-----CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSS--CCCEEECCCCSCEEEEEE--CSSCTTEE
T ss_pred Cccceecc-----CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCc--ceeeeecCCCCcEEEEEE--CCCCCcEE
Confidence 33332222 2445778889887642 45655555 9999999754 456677767788887775 46777678
Q ss_pred EEEecCCceEEEEecccCCCcccc------ceeeeecccccccCCeEEEEeccccceeeEEecCCcEEEEEcCCCccccc
Q 047869 1973 IVLSECGSLYRLELSVEGNVGATP------LKEIIQFNDREIHAKGLSLYFSSTYKLLFLSFQDGTTLVGRLSPNAASLS 2046 (2233)
Q Consensus 1973 LVLSS~G~LY~Qels~s~d~g~~~------ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY~~G~Sf~a~Ls~~~~sv~ 2046 (2233)
+..+.+|.|+.-++......-... .............+.-.++.|+++-++|+.+-.+|+..+-.+......
T Consensus 203 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~-- 280 (408)
T 4a11_B 203 ATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENT-- 280 (408)
T ss_dssp EEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBC--
T ss_pred EEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccc--
Confidence 889999999998886432100000 000000011112344667899999999999999998888776543210
Q ss_pred ceeEEEEccCCCCCCCcccceeeccCCCceEEEEeccCCCceEEEEecCCceeeeccccccCCCCCeEEEEEeecCCCCC
Q 047869 2047 EVSYVFEEQDGKLRSAGLHRWKELLASSGLFFCFSSLKSNAAVAVSLGTNELIAQNMRHAAGSTSPLVGVTAYKPLSKDK 2126 (2233)
Q Consensus 2047 eis~Vfe~~~gk~~~a~L~qWsEV~~hPGLf~cls~~~sn~pvvv~l~pd~I~iQeiK~~~~sSs~vdgva~y~p~s~~r 2126 (2233)
. .+..... ........+.-.....+.+++.+. ++..-+.-+...+ .++.++. -...+..++. .| +.
T Consensus 281 --~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~~-~~~~~~~---~~~~v~~~~~-s~---~~ 346 (408)
T 4a11_B 281 --L-VNYGKVC-NNSKKGLKFTVSCGCSSEFVFVPY--GSTIAVYTVYSGE-QITMLKG---HYKTVDCCVF-QS---NF 346 (408)
T ss_dssp --C-CCCCCCC-CCCSSCCCCEECCSSSSCEEEEEE--TTEEEEEETTTCC-EEEEECC---CSSCEEEEEE-ET---TT
T ss_pred --e-ecccccc-ccccccceeEEecCCCceEEEEec--CCEEEEEECcCCc-ceeeecc---CCCeEEEEEE-cC---CC
Confidence 0 0000000 011111222222333344444222 4444444333333 2333332 2444555554 33 44
Q ss_pred eEEEEEeeCCceeEEeccC
Q 047869 2127 VHCLVLHDDGSLQIYSHVP 2145 (2233)
Q Consensus 2127 ttlLLLcEDGSLrIYsa~P 2145 (2233)
..++.-.+||.+++|....
T Consensus 347 ~~l~s~~~dg~i~iw~~~~ 365 (408)
T 4a11_B 347 QELYSGSRDCNILAWVPSL 365 (408)
T ss_dssp TEEEEEETTSCEEEEEECC
T ss_pred CEEEEECCCCeEEEEeCCC
Confidence 5677888999999998643
No 3
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.31 E-value=0.0022 Score=68.42 Aligned_cols=272 Identities=14% Similarity=0.101 Sum_probs=154.4
Q ss_pred ccCceEEEeeCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecc-cceEEEEecCC
Q 047869 1817 SSRGRLAVGEGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGY-EDCQVLTLNPR 1895 (2233)
Q Consensus 1817 s~rGrLAVaEgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGL-kDC~VLTfss~ 1895 (2233)
..+..+|.+-.++|.|+++..-- ....+..+....-.-.|..++|+| ++++|++++. ..+.+..+...
T Consensus 61 ~~~~~l~~~~dg~i~iw~~~~~~----------~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~ 129 (337)
T 1gxr_A 61 NPTRHVYTGGKGCVKVWDISHPG----------NKSPVSQLDCLNRDNYIRSCKLLP-DGCTLIVGGEASTLSIWDLAAP 129 (337)
T ss_dssp SSSSEEEEECBSEEEEEETTSTT----------CCSCSEEEECSCTTSBEEEEEECT-TSSEEEEEESSSEEEEEECCCC
T ss_pred cCCcEEEEcCCCeEEEEECCCCC----------ceeeeecccccCCCCcEEEEEEcC-CCCEEEEEcCCCcEEEEECCCC
Confidence 34456777668999999985311 111122222223345688999999 6778887765 34555555332
Q ss_pred CceeeeeeeeeccCCceEEEeEEecCCCceEEEEec-CeEEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEE
Q 047869 1896 GEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTN-KFVKIYDLSQDNISPLHYFTLPDDMIVDATLVIASRGKMFLIV 1974 (2233)
Q Consensus 1896 GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~-~FVKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILV 1974 (2233)
+ ......+.-....|..+.|-|..+. |++.+. ..|+|||+... .+...+.-..+.|...++ .++|. ++++
T Consensus 130 -~--~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~dg~v~~~d~~~~--~~~~~~~~~~~~i~~~~~--~~~~~-~l~~ 200 (337)
T 1gxr_A 130 -T--PRIKAELTSSAPACYALAISPDSKV-CFSCCSDGNIAVWDLHNQ--TLVRQFQGHTDGASCIDI--SNDGT-KLWT 200 (337)
T ss_dssp -----EEEEEEECSSSCEEEEEECTTSSE-EEEEETTSCEEEEETTTT--EEEEEECCCSSCEEEEEE--CTTSS-EEEE
T ss_pred -C--cceeeecccCCCceEEEEECCCCCE-EEEEeCCCcEEEEeCCCC--ceeeeeecccCceEEEEE--CCCCC-EEEE
Confidence 1 1112222233566899999997655 555554 58999999754 456666666778887764 35664 6778
Q ss_pred EecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccceeeEEecCCcEEEEEcCCCcccccceeEEEEc
Q 047869 1975 LSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSFQDGTTLVGRLSPNAASLSEVSYVFEE 2054 (2233)
Q Consensus 1975 LSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY~~G~Sf~a~Ls~~~~sv~eis~Vfe~ 2054 (2233)
.+.+|.|+.-++.... ..... ...+.-.++.|+++-+.|.++..+|+..+-.+.... .... ..
T Consensus 201 ~~~dg~i~~~d~~~~~------~~~~~-----~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~-----~~~~-~~ 263 (337)
T 1gxr_A 201 GGLDNTVRSWDLREGR------QLQQH-----DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD-----KYQL-HL 263 (337)
T ss_dssp EETTSEEEEEETTTTE------EEEEE-----ECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSC-----EEEE-CC
T ss_pred EecCCcEEEEECCCCc------eEeee-----cCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCC-----eEEE-cC
Confidence 8899999988876321 00111 123446678999999999999999988887764332 1111 00
Q ss_pred cCCCCCCCcccceeeccCCCceEEEEeccCCCceEEEEecCCceeeeccccccCCCCCeEEEEEeecCCCCCeEEEEEee
Q 047869 2055 QDGKLRSAGLHRWKELLASSGLFFCFSSLKSNAAVAVSLGTNELIAQNMRHAAGSTSPLVGVTAYKPLSKDKVHCLVLHD 2134 (2233)
Q Consensus 2055 ~~gk~~~a~L~qWsEV~~hPGLf~cls~~~sn~pvvv~l~pd~I~iQeiK~~~~sSs~vdgva~y~p~s~~rttlLLLcE 2134 (2233)
.. ..-.-..|+. .+ .++++ .. .++..-+.-+...+... ...+ ...+..++. +.+...++.-.+
T Consensus 264 --~~-~~v~~~~~~~--~~-~~l~~-~~-~dg~i~~~~~~~~~~~~-~~~~----~~~v~~~~~----s~~~~~l~~~~~ 326 (337)
T 1gxr_A 264 --HE-SCVLSLKFAY--CG-KWFVS-TG-KDNLLNAWRTPYGASIF-QSKE----SSSVLSCDI----SVDDKYIVTGSG 326 (337)
T ss_dssp --CS-SCEEEEEECT--TS-SEEEE-EE-TTSEEEEEETTTCCEEE-EEEC----SSCEEEEEE----CTTSCEEEEEET
T ss_pred --Cc-cceeEEEECC--CC-CEEEE-ec-CCCcEEEEECCCCeEEE-EecC----CCcEEEEEE----CCCCCEEEEecC
Confidence 00 0000112211 11 12222 12 24444444444433332 2222 233444444 334567788899
Q ss_pred CCceeEEe
Q 047869 2135 DGSLQIYS 2142 (2233)
Q Consensus 2135 DGSLrIYs 2142 (2233)
||.+++|.
T Consensus 327 dg~i~iw~ 334 (337)
T 1gxr_A 327 DKKATVYE 334 (337)
T ss_dssp TSCEEEEE
T ss_pred CCeEEEEE
Confidence 99999997
No 4
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.11 E-value=0.0022 Score=75.59 Aligned_cols=206 Identities=17% Similarity=0.199 Sum_probs=124.1
Q ss_pred cceecc-cCceEEEeeCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEe---ecccce
Q 047869 1812 SLLSVS-SRGRLAVGEGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTV---AGYEDC 1887 (2233)
Q Consensus 1812 qLLSas-~rGrLAVaEgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAV---cGLkDC 1887 (2233)
++|+.+ ..|.+|++-.+.|.|++...+...........+..+..+....+++..|.+++||| ++++||| .|-.|-
T Consensus 40 n~lavs~~~~~l~~~~~dgv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp-dg~~lav~~~sgs~d~ 118 (434)
T 2oit_A 40 SLLAVSNKYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSC-DNLTLSACMMSSEYGS 118 (434)
T ss_dssp BCEEEETTTTEEEEEETTEEEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECT-TSCEEEEEEEETTTEE
T ss_pred cEEEEecCCCEEEEECCCEEEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcC-CCCEEEEEEeccCCCc
Confidence 556655 46888888888899999988866533211111222233334455677899999999 6889998 577777
Q ss_pred EEEEecCCCc----eee-e-e-eeeecc-CCceEEEeEEecCCCceEEEEecC-eEEEEeCcCCCCCCcEEEEcCCCCee
Q 047869 1888 QVLTLNPRGE----VTD-R-L-AIELAL-QGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQDNISPLHYFTLPDDMIV 1958 (2233)
Q Consensus 1888 ~VLTfss~Ge----V~D-R-L-~LeL~L-eg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D~lSPvyyF~LpsGkIr 1958 (2233)
.|.-++-+.. ... + + .+.... .+..|..+.|-|.....||.++.+ .|+|||+... .....+.-..+.|.
T Consensus 119 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~--~~~~~~~~~~~~v~ 196 (434)
T 2oit_A 119 IIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTET--VKVCATLPSTVAVT 196 (434)
T ss_dssp EEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSS--EEEEEEECGGGCEE
T ss_pred eEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCC--cceeeccCCCCcee
Confidence 7666642211 100 0 0 111111 256799999999866678877766 8999999865 22222322345677
Q ss_pred EEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccc---cccCCeEEEEeccccceeeEEecCC
Q 047869 1959 DATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDR---EIHAKGLSLYFSSTYKLLFLSFQDG 2031 (2233)
Q Consensus 1959 DaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~---q~~~~GVSVyYS~tl~LLF~SY~~G 2031 (2233)
.+++ .++|+ ++++-+.+|.|+.-++. +.. ...+..+.. .......++.+++...+ +++|.+|
T Consensus 197 ~v~w--spdg~-~lasgs~dg~v~iwd~~--~~~-----~~~~~~~~~~~~~~~~~v~~v~w~~~~~~-l~~~~~~ 261 (434)
T 2oit_A 197 SVCW--SPKGK-QLAVGKQNGTVVQYLPT--LQE-----KKVIPCPPFYESDHPVRVLDVLWIGTYVF-AIVYAAA 261 (434)
T ss_dssp EEEE--CTTSS-CEEEEETTSCEEEECTT--CCE-----EEEECCCTTCCTTSCEEEEEEEEEETTEE-EEEEEET
T ss_pred EEEE--cCCCC-EEEEEcCCCcEEEEccC--Ccc-----cccccCCcccCCCCceeEEEEEEecCceE-EEEEccC
Confidence 7664 45675 67788899999987765 110 111111111 01125678899886544 4456544
No 5
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.11 E-value=0.0038 Score=66.55 Aligned_cols=243 Identities=12% Similarity=0.069 Sum_probs=142.3
Q ss_pred ceEEEEeecccCccceEEeecccceEEEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEe-cCeEEEEeCcC
Q 047869 1863 RFEIVHLAFNSIVENYLTVAGYEDCQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVT-NKFVKIYDLSQ 1941 (2233)
Q Consensus 1863 pFeVlsLafNP~nEdyLAVcGLkDC~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT-~~FVKIYDLS~ 1941 (2233)
+-.|..++|+| ++++||++|-..+.|..+...+.......+...-....|..+.|-|..+. |++.+ ...|+|||+..
T Consensus 51 ~~~v~~~~~~~-~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~~~d~~~ 128 (337)
T 1gxr_A 51 GEVVCAVTISN-PTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCT-LIVGGEASTLSIWDLAA 128 (337)
T ss_dssp SSCCCEEEECS-SSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSE-EEEEESSSEEEEEECCC
T ss_pred CCceEEEEEec-CCcEEEEcCCCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCE-EEEEcCCCcEEEEECCC
Confidence 34577899998 77899999955566666655443322222222234678999999998765 55554 45899999988
Q ss_pred CCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEecccc
Q 047869 1942 DNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTY 2021 (2233)
Q Consensus 1942 D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl 2021 (2233)
....+...+.-..+.|...++- ++|+ ++++.+.+|.|+.-++.... ....+ .. ..+.-.++.++++-
T Consensus 129 ~~~~~~~~~~~~~~~i~~~~~~--~~~~-~l~~~~~dg~v~~~d~~~~~------~~~~~--~~--~~~~i~~~~~~~~~ 195 (337)
T 1gxr_A 129 PTPRIKAELTSSAPACYALAIS--PDSK-VCFSCCSDGNIAVWDLHNQT------LVRQF--QG--HTDGASCIDISNDG 195 (337)
T ss_dssp C--EEEEEEECSSSCEEEEEEC--TTSS-EEEEEETTSCEEEEETTTTE------EEEEE--CC--CSSCEEEEEECTTS
T ss_pred CCcceeeecccCCCceEEEEEC--CCCC-EEEEEeCCCcEEEEeCCCCc------eeeee--ec--ccCceEEEEECCCC
Confidence 7766677777777788877753 5564 67788899999988876211 11111 11 13345678899998
Q ss_pred ceeeEEecCCcEEEEEcCCCcccccceeEEEEccCCCCCCCcccceeeccCCCceEEEEeccCCCceEEEEecCCceeee
Q 047869 2022 KLLFLSFQDGTTLVGRLSPNAASLSEVSYVFEEQDGKLRSAGLHRWKELLASSGLFFCFSSLKSNAAVAVSLGTNELIAQ 2101 (2233)
Q Consensus 2022 ~LLF~SY~~G~Sf~a~Ls~~~~sv~eis~Vfe~~~gk~~~a~L~qWsEV~~hPGLf~cls~~~sn~pvvv~l~pd~I~iQ 2101 (2233)
+.|+.+..+|+..+-.+.... ....+... + . ..-..| .+.|-++++.. .++...+..+...+.. +
T Consensus 196 ~~l~~~~~dg~i~~~d~~~~~-----~~~~~~~~-~--~-v~~~~~----s~~~~~l~~~~-~~~~i~~~~~~~~~~~-~ 260 (337)
T 1gxr_A 196 TKLWTGGLDNTVRSWDLREGR-----QLQQHDFT-S--Q-IFSLGY----CPTGEWLAVGM-ESSNVEVLHVNKPDKY-Q 260 (337)
T ss_dssp SEEEEEETTSEEEEEETTTTE-----EEEEEECS-S--C-EEEEEE----CTTSSEEEEEE-TTSCEEEEETTSSCEE-E
T ss_pred CEEEEEecCCcEEEEECCCCc-----eEeeecCC-C--c-eEEEEE----CCCCCEEEEEc-CCCcEEEEECCCCCeE-E
Confidence 999999999988887664331 11111110 0 0 001112 12222222222 2344444444433322 1
Q ss_pred ccccccCCCCCeEEEEEeecCCCCCeEEEEEeeCCceeEEec
Q 047869 2102 NMRHAAGSTSPLVGVTAYKPLSKDKVHCLVLHDDGSLQIYSH 2143 (2233)
Q Consensus 2102 eiK~~~~sSs~vdgva~y~p~s~~rttlLLLcEDGSLrIYsa 2143 (2233)
.. .....+..++. +.+...++.-.+||.+++|..
T Consensus 261 ~~----~~~~~v~~~~~----~~~~~~l~~~~~dg~i~~~~~ 294 (337)
T 1gxr_A 261 LH----LHESCVLSLKF----AYCGKWFVSTGKDNLLNAWRT 294 (337)
T ss_dssp EC----CCSSCEEEEEE----CTTSSEEEEEETTSEEEEEET
T ss_pred Ec----CCccceeEEEE----CCCCCEEEEecCCCcEEEEEC
Confidence 11 12334455554 234556778889999999983
No 6
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.10 E-value=0.0022 Score=69.56 Aligned_cols=162 Identities=13% Similarity=0.131 Sum_probs=106.9
Q ss_pred EEEEeecccCccceEEeeccc-ceEEEEecCCCceeeeeeeeeccCCceEEEeEEecCC-CceEEEEecC-eEEEEeCcC
Q 047869 1865 EIVHLAFNSIVENYLTVAGYE-DCQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGS-PVQLMVVTNK-FVKIYDLSQ 1941 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGLk-DC~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGS-Qt~LAVVT~~-FVKIYDLS~ 1941 (2233)
.|..++||| ++++||++|.. .+.|..+.... .+..-.+.-...-|..+.|.|.. ...|+.+..+ .|+|||+..
T Consensus 13 ~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~---~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 88 (379)
T 3jrp_A 13 LIHDAVLDY-YGKRLATCSSDKTIKIFEVEGET---HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEEN 88 (379)
T ss_dssp CEEEEEECS-SSSEEEEEETTSCEEEEEEETTE---EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEET
T ss_pred cEEEEEEcC-CCCEEEEEECCCcEEEEecCCCc---ceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCC
Confidence 477899999 67889888754 46777764321 11111222235678999998762 3456666654 899999998
Q ss_pred CCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEecc--
Q 047869 1942 DNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSS-- 2019 (2233)
Q Consensus 1942 D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~-- 2019 (2233)
....+...+.-..+.|..++|-....| ..+++.+.+|.|+.-++..........+. . ....-.++.|++
T Consensus 89 ~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~------~--~~~~v~~~~~~~~~ 159 (379)
T 3jrp_A 89 GRWSQIAVHAVHSASVNSVQWAPHEYG-PLLLVASSDGKVSVVEFKENGTTSPIIID------A--HAIGVNSASWAPAT 159 (379)
T ss_dssp TEEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEECCTTSCCCEEEEE------C--CTTCEEEEEECCCC
T ss_pred CceeEeeeecCCCcceEEEEeCCCCCC-CEEEEecCCCcEEEEecCCCCceeeEEec------C--CCCceEEEEEcCcc
Confidence 776677777777888998886543225 46778899999998888743222111111 1 123355677887
Q ss_pred -----------ccceeeEEecCCcEEEEEcC
Q 047869 2020 -----------TYKLLFLSFQDGTTLVGRLS 2039 (2233)
Q Consensus 2020 -----------tl~LLF~SY~~G~Sf~a~Ls 2039 (2233)
.-++|.....+|+..+-.+.
T Consensus 160 ~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 190 (379)
T 3jrp_A 160 IEEDGEHNGTKESRKFVTGGADNLVKIWKYN 190 (379)
T ss_dssp ----------CTTCEEEEEETTSCEEEEEEE
T ss_pred ccccccccCCCCCCEEEEEeCCCeEEEEEec
Confidence 47888888888887776654
No 7
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.05 E-value=0.011 Score=65.72 Aligned_cols=194 Identities=14% Similarity=0.061 Sum_probs=126.6
Q ss_pred ceEEEe-eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecccceEEEEecCCCce
Q 047869 1820 GRLAVG-EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYEDCQVLTLNPRGEV 1898 (2233)
Q Consensus 1820 GrLAVa-EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLkDC~VLTfss~GeV 1898 (2233)
..+|.+ ..+.|.|+++..--... . +....-.-.|.+++|+|.++++||+++. |..|.-++-+|..
T Consensus 87 ~~l~s~~~dg~i~iwd~~~~~~~~-----------~--~~~~~h~~~v~~~~~~~~~~~~l~s~~~-d~~i~iwd~~~~~ 152 (383)
T 3ei3_B 87 TTVAVGSKGGDIILWDYDVQNKTS-----------F--IQGMGPGDAITGMKFNQFNTNQLFVSSI-RGATTLRDFSGSV 152 (383)
T ss_dssp TEEEEEEBTSCEEEEETTSTTCEE-----------E--ECCCSTTCBEEEEEEETTEEEEEEEEET-TTEEEEEETTSCE
T ss_pred CEEEEEcCCCeEEEEeCCCcccce-----------e--eecCCcCCceeEEEeCCCCCCEEEEEeC-CCEEEEEECCCCc
Confidence 366765 77899999985221111 0 1111233468899999988888888776 3344444444432
Q ss_pred eeeeeeeeccCCceEEEeEEecCCCceEEEEec-CeEEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEec
Q 047869 1899 TDRLAIELALQGAYIRRVDWVPGSPVQLMVVTN-KFVKIYDLSQDNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSE 1977 (2233)
Q Consensus 1899 ~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~-~FVKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS 1977 (2233)
...+.-+ .-....|..+.|-|..+. |+..+. ..|+|||+. -.+...+.-..+.|..++| .++|..+++..+.
T Consensus 153 ~~~~~~~-~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~i~d~~---~~~~~~~~~h~~~v~~~~~--~~~~~~~l~s~~~ 225 (383)
T 3ei3_B 153 IQVFAKT-DSWDYWYCCVDVSVSRQM-LATGDSTGRLLLLGLD---GHEIFKEKLHKAKVTHAEF--NPRCDWLMATSSV 225 (383)
T ss_dssp EEEEECC-CCSSCCEEEEEEETTTTE-EEEEETTSEEEEEETT---SCEEEEEECSSSCEEEEEE--CSSCTTEEEEEET
T ss_pred eEEEecc-CCCCCCeEEEEECCCCCE-EEEECCCCCEEEEECC---CCEEEEeccCCCcEEEEEE--CCCCCCEEEEEeC
Confidence 2222111 112467999999998775 555555 499999993 4578888888888988875 4667667888899
Q ss_pred CCceEEEEecccCCCccccceeeeecccccccCCeEEEEecc-ccceeeEEecCCcEEEEEcCCC
Q 047869 1978 CGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSS-TYKLLFLSFQDGTTLVGRLSPN 2041 (2233)
Q Consensus 1978 ~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~-tl~LLF~SY~~G~Sf~a~Ls~~ 2041 (2233)
+|.|+.-++......+... ... ...+.-.++.+++ +-++|..+..+|+..+-.+...
T Consensus 226 d~~i~iwd~~~~~~~~~~~--~~~-----~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~ 283 (383)
T 3ei3_B 226 DATVKLWDLRNIKDKNSYI--AEM-----PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDW 283 (383)
T ss_dssp TSEEEEEEGGGCCSTTCEE--EEE-----ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBT
T ss_pred CCEEEEEeCCCCCcccceE--EEe-----cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCC
Confidence 9999999888532221111 111 1234466789999 8888888888998888776543
No 8
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.97 E-value=0.018 Score=62.04 Aligned_cols=191 Identities=13% Similarity=0.202 Sum_probs=120.2
Q ss_pred ecccC-ceEEEe-eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecccc-eEEEE
Q 047869 1815 SVSSR-GRLAVG-EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYED-CQVLT 1891 (2233)
Q Consensus 1815 Sas~r-GrLAVa-EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLkD-C~VLT 1891 (2233)
+.+.. ..||.+ ..+.|.|+++..--.. .+++ .-.-.|.+++|+| ++++||++|... +.|..
T Consensus 39 ~~s~~~~~l~~~~~dg~i~vwd~~~~~~~----------~~~~-----~h~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd 102 (369)
T 3zwl_B 39 KYNKEGDLLFSCSKDSSASVWYSLNGERL----------GTLD-----GHTGTIWSIDVDC-FTKYCVTGSADYSIKLWD 102 (369)
T ss_dssp EECTTSCEEEEEESSSCEEEEETTTCCEE----------EEEC-----CCSSCEEEEEECT-TSSEEEEEETTTEEEEEE
T ss_pred EEcCCCCEEEEEeCCCEEEEEeCCCchhh----------hhhh-----hcCCcEEEEEEcC-CCCEEEEEeCCCeEEEEE
Confidence 33444 456665 7778999987431100 1111 1233588999999 778888877642 44444
Q ss_pred ecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEec------CeEEEEeCcCCCCC---------CcEEEEcCCC-
Q 047869 1892 LNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTN------KFVKIYDLSQDNIS---------PLHYFTLPDD- 1955 (2233)
Q Consensus 1892 fss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~------~FVKIYDLS~D~lS---------PvyyF~LpsG- 1955 (2233)
+ .+|+....+. .+.-|..+.|-|..+. +++.+. ..|+|||+...... |...+....+
T Consensus 103 ~-~~~~~~~~~~-----~~~~v~~~~~~~~~~~-l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (369)
T 3zwl_B 103 V-SNGQCVATWK-----SPVPVKRVEFSPCGNY-FLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGL 175 (369)
T ss_dssp T-TTCCEEEEEE-----CSSCEEEEEECTTSSE-EEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTC
T ss_pred C-CCCcEEEEee-----cCCCeEEEEEccCCCE-EEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCc
Confidence 4 3344433332 4566899999998876 444444 59999999988653 5555555555
Q ss_pred -CeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccceeeEEecCCcEE
Q 047869 1956 -MIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSFQDGTTL 2034 (2233)
Q Consensus 1956 -kIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY~~G~Sf 2034 (2233)
.|..+++ .++|. ++++.+.+|.|+.-++..... ....+. . ..+.-.++.++++-++|+.+..+|+..
T Consensus 176 ~~~~~~~~--~~~~~-~l~~~~~dg~i~i~d~~~~~~-----~~~~~~--~--~~~~v~~~~~~~~~~~l~~~~~d~~i~ 243 (369)
T 3zwl_B 176 DAATVAGW--STKGK-YIIAGHKDGKISKYDVSNNYE-----YVDSID--L--HEKSISDMQFSPDLTYFITSSRDTNSF 243 (369)
T ss_dssp CCEEEEEE--CGGGC-EEEEEETTSEEEEEETTTTTE-----EEEEEE--C--CSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred cceeEEEE--cCCCC-EEEEEcCCCEEEEEECCCCcE-----eEEEEe--c--CCCceeEEEECCCCCEEEEecCCceEE
Confidence 5655553 35564 677788999999888763211 011111 1 123356789999999999999999888
Q ss_pred EEEcCC
Q 047869 2035 VGRLSP 2040 (2233)
Q Consensus 2035 ~a~Ls~ 2040 (2233)
+-.+..
T Consensus 244 v~d~~~ 249 (369)
T 3zwl_B 244 LVDVST 249 (369)
T ss_dssp EEETTT
T ss_pred EEECCC
Confidence 876643
No 9
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.94 E-value=0.023 Score=61.91 Aligned_cols=289 Identities=11% Similarity=0.076 Sum_probs=160.2
Q ss_pred cCceEEEe-eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecc-cceEEEEecCC
Q 047869 1818 SRGRLAVG-EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGY-EDCQVLTLNPR 1895 (2233)
Q Consensus 1818 ~rGrLAVa-EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGL-kDC~VLTfss~ 1895 (2233)
.+..+|++ ..++|.|+++..--. ....++. .-.-.|..++|+| ++++||++|. ..+.|..+..
T Consensus 19 ~~~~l~~~~~d~~v~i~~~~~~~~--------~~~~~~~-----~h~~~v~~~~~~~-~~~~l~~~~~dg~i~vwd~~~- 83 (372)
T 1k8k_C 19 DRTQIAICPNNHEVHIYEKSGNKW--------VQVHELK-----EHNGQVTGVDWAP-DSNRIVTCGTDRNAYVWTLKG- 83 (372)
T ss_dssp TSSEEEEECSSSEEEEEEEETTEE--------EEEEEEE-----CCSSCEEEEEEET-TTTEEEEEETTSCEEEEEEET-
T ss_pred CCCEEEEEeCCCEEEEEeCCCCcE--------Eeeeeec-----CCCCcccEEEEeC-CCCEEEEEcCCCeEEEEECCC-
Confidence 44567777 888999998743200 0001111 1234688999999 7888888875 3466666633
Q ss_pred CceeeeeeeeeccCCceEEEeEEecCCCceEEEEec-CeEEEEeCcCCCCCC-cEEEEcC-CCCeeEEEEEEecCCcEEE
Q 047869 1896 GEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTN-KFVKIYDLSQDNISP-LHYFTLP-DDMIVDATLVIASRGKMFL 1972 (2233)
Q Consensus 1896 GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~-~FVKIYDLS~D~lSP-vyyF~Lp-sGkIrDaTfv~~e~G~~~I 1972 (2233)
|+...... +.-.+..|..+.|-|..+. ||+.+. ..|+|||+....... ...+..+ .+.|...+|- ++|. ++
T Consensus 84 ~~~~~~~~--~~~~~~~v~~~~~~~~~~~-l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~-~l 157 (372)
T 1k8k_C 84 RTWKPTLV--ILRINRAARCVRWAPNEKK-FAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWH--PNSV-LL 157 (372)
T ss_dssp TEEEEEEE--CCCCSSCEEEEEECTTSSE-EEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEEC--TTSS-EE
T ss_pred CeeeeeEE--eecCCCceeEEEECCCCCE-EEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEc--CCCC-EE
Confidence 33221111 1123567999999998754 666665 489999998765321 1222233 5677777653 5564 67
Q ss_pred EEEecCCceEEEEecccCCCcc---------ccceeeeecccccccCCeEEEEeccccceeeEEecCCcEEEEEcCCCcc
Q 047869 1973 IVLSECGSLYRLELSVEGNVGA---------TPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSFQDGTTLVGRLSPNAA 2043 (2233)
Q Consensus 1973 LVLSS~G~LY~Qels~s~d~g~---------~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY~~G~Sf~a~Ls~~~~ 2043 (2233)
++.+.+|.++.-++........ ....+.+..-. .-.+.-.++.|+++-++|+.+..+|+..+-.+....
T Consensus 158 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~- 235 (372)
T 1k8k_C 158 AAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS-SSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKM- 235 (372)
T ss_dssp EEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC-CCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTT-
T ss_pred EEEcCCCCEEEEEcccccccccccccccccccchhhheEecC-CCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCc-
Confidence 7788999999888753211000 00001111110 112335678899999999999999988887764321
Q ss_pred cccceeEEEEccCCCCCCCcccceeeccCCCceEEEEeccCCCceEEEEecC--Cc-eeeec------------------
Q 047869 2044 SLSEVSYVFEEQDGKLRSAGLHRWKELLASSGLFFCFSSLKSNAAVAVSLGT--NE-LIAQN------------------ 2102 (2233)
Q Consensus 2044 sv~eis~Vfe~~~gk~~~a~L~qWsEV~~hPGLf~cls~~~sn~pvvv~l~p--d~-I~iQe------------------ 2102 (2233)
....+....+ .-.-..|+ +.|-+++.. .++...+..+.. +. ..++.
T Consensus 236 ----~~~~~~~~~~---~v~~~~~~----~~~~~l~~~--~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (372)
T 1k8k_C 236 ----AVATLASETL---PLLAVTFI----TESSLVAAG--HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERF 302 (372)
T ss_dssp ----EEEEEECSSC---CEEEEEEE----ETTEEEEEE--TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHH
T ss_pred ----eeEEEccCCC---CeEEEEEe----cCCCEEEEE--eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhh
Confidence 1112221111 11112333 234444433 466666666655 22 11111
Q ss_pred ----------------cccccCCCCCeEEEEEeecCCCCCeEEEEEeeCCceeEEe
Q 047869 2103 ----------------MRHAAGSTSPLVGVTAYKPLSKDKVHCLVLHDDGSLQIYS 2142 (2233)
Q Consensus 2103 ----------------iK~~~~sSs~vdgva~y~p~s~~rttlLLLcEDGSLrIYs 2142 (2233)
.+...+-...+-.+++..+-+++...++--.+||.+++|.
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~ 358 (372)
T 1k8k_C 303 QNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWD 358 (372)
T ss_dssp HHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEE
T ss_pred hhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEE
Confidence 1111133455667766444333446778888999999998
No 10
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.92 E-value=0.004 Score=67.12 Aligned_cols=168 Identities=10% Similarity=0.130 Sum_probs=106.3
Q ss_pred cceEEEEeecccCccceEEeecc----cceEEEEecCCCceeeeeeeeeccCCceEEEeEEecCC--CceEEEEecC-eE
Q 047869 1862 VRFEIVHLAFNSIVENYLTVAGY----EDCQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGS--PVQLMVVTNK-FV 1934 (2233)
Q Consensus 1862 VpFeVlsLafNP~nEdyLAVcGL----kDC~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGS--Qt~LAVVT~~-FV 1934 (2233)
-.-.|.+|+|+|..+.++|+.+. ..+.|..+.. |+..-.... -...-|..+.|-|.+ ...||+.+.+ .|
T Consensus 17 h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~-~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i 92 (357)
T 3i2n_A 17 FNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQH-GDLKLLREI---EKAKPIKCGTFGATSLQQRYLATGDFGGNL 92 (357)
T ss_dssp CSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECS-SSEEEEEEE---EESSCEEEEECTTCCTTTCCEEEEETTSCE
T ss_pred CCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCC-Ccccceeee---cccCcEEEEEEcCCCCCCceEEEecCCCeE
Confidence 34578899999966666655544 3444554432 222211111 125678999999986 4567777755 89
Q ss_pred EEEeCcCCCCCCcEEEEcCCCCeeEEEEEE----ecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccC
Q 047869 1935 KIYDLSQDNISPLHYFTLPDDMIVDATLVI----ASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHA 2010 (2233)
Q Consensus 1935 KIYDLS~D~lSPvyyF~LpsGkIrDaTfv~----~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~ 2010 (2233)
+|||+.... .+...+.-..+.|....+.. .++|. .++..+.+|.|+.-++..... .+ ..++...+....
T Consensus 93 ~iwd~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~s~~~~-~l~~~~~d~~i~vwd~~~~~~----~~-~~~~~~~~~~~~ 165 (357)
T 3i2n_A 93 HIWNLEAPE-MPVYSVKGHKEIINAIDGIGGLGIGEGAP-EIVTGSRDGTVKVWDPRQKDD----PV-ANMEPVQGENKR 165 (357)
T ss_dssp EEECTTSCS-SCSEEECCCSSCEEEEEEESGGGCC-CCC-EEEEEETTSCEEEECTTSCSS----CS-EEECCCTTSCCC
T ss_pred EEEeCCCCC-ccEEEEEecccceEEEeeccccccCCCcc-EEEEEeCCCeEEEEeCCCCCC----cc-eeccccCCCCCC
Confidence 999998654 47778888888999988752 34564 677888999999888763321 11 111111221122
Q ss_pred CeEEEE----eccccceeeEEecCCcEEEEEcCC
Q 047869 2011 KGLSLY----FSSTYKLLFLSFQDGTTLVGRLSP 2040 (2233)
Q Consensus 2011 ~GVSVy----YS~tl~LLF~SY~~G~Sf~a~Ls~ 2040 (2233)
.-.++. |+++-++|+.+..+|+..+-.+..
T Consensus 166 ~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 199 (357)
T 3i2n_A 166 DCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRN 199 (357)
T ss_dssp CEEEEEEECCCC-CCCEEEEEETTSEEEEEETTT
T ss_pred ceEEEEEEeccCCCCCEEEEEccCCeEEEEECcc
Confidence 333444 788999999999999888877644
No 11
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.90 E-value=0.0076 Score=66.22 Aligned_cols=235 Identities=17% Similarity=0.208 Sum_probs=135.7
Q ss_pred EEEEeecccCccceEEeecccceEEEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecCeEEEEeCcCCCC
Q 047869 1865 EIVHLAFNSIVENYLTVAGYEDCQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNKFVKIYDLSQDNI 1944 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGLkDC~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~FVKIYDLS~D~l 1944 (2233)
.|..++|+| ++++||+++.. -.|..++.+|.....+. -....|..+.|-|..+..++......|+|||+...
T Consensus 110 ~v~~~~~s~-~~~~l~~~~~d-g~i~i~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-- 181 (425)
T 1r5m_A 110 QVTCLAWSH-DGNSIVTGVEN-GELRLWNKTGALLNVLN----FHRAPIVSVKWNKDGTHIISMDVENVTILWNVISG-- 181 (425)
T ss_dssp CEEEEEECT-TSSEEEEEETT-SCEEEEETTSCEEEEEC----CCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTT--
T ss_pred ceEEEEEcC-CCCEEEEEeCC-CeEEEEeCCCCeeeecc----CCCccEEEEEECCCCCEEEEEecCCeEEEEECCCC--
Confidence 688999999 77888887654 44555556665544332 23567999999998776444444469999999643
Q ss_pred CCcEEEEcCCCC---------------eeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeeccccccc
Q 047869 1945 SPLHYFTLPDDM---------------IVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIH 2009 (2233)
Q Consensus 1945 SPvyyF~LpsGk---------------IrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~ 2009 (2233)
.+...+..+.+. |..+++. +++ .+++.+.+|.|+.-++...... ..+. . ..
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~g~i~~~d~~~~~~~------~~~~--~--~~ 247 (425)
T 1r5m_A 182 TVMQHFELKETGGSSINAENHSGDGSLGVDVEWV--DDD--KFVIPGPKGAIFVYQITEKTPT------GKLI--G--HH 247 (425)
T ss_dssp EEEEEECCC---------------CCCBSCCEEE--ETT--EEEEECGGGCEEEEETTCSSCS------EEEC--C--CS
T ss_pred cEEEEeeccccCccceeeccccCCcceeeEEEEc--CCC--EEEEEcCCCeEEEEEcCCCcee------eeec--c--CC
Confidence 456666666665 7777765 334 4788899999998887732110 0111 1 12
Q ss_pred CCeEEEEeccccceeeEEecCCcEEEEEcCCCcccccceeEEEEccCCCCCCCcccceeeccCCCceEEEEeccCCCceE
Q 047869 2010 AKGLSLYFSSTYKLLFLSFQDGTTLVGRLSPNAASLSEVSYVFEEQDGKLRSAGLHRWKELLASSGLFFCFSSLKSNAAV 2089 (2233)
Q Consensus 2010 ~~GVSVyYS~tl~LLF~SY~~G~Sf~a~Ls~~~~sv~eis~Vfe~~~gk~~~a~L~qWsEV~~hPGLf~cls~~~sn~pv 2089 (2233)
+.-.++.+++.-++|+.+..+|+..+-.+.... ....+.... ..-.-..| .+.|.+++.+. .+...
T Consensus 248 ~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~-----~~~~~~~~~---~~i~~~~~----~~~~~l~~~~~--d~~i~ 313 (425)
T 1r5m_A 248 GPISVLEFNDTNKLLLSASDDGTLRIWHGGNGN-----SQNCFYGHS---QSIVSASW----VGDDKVISCSM--DGSVR 313 (425)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEECSSSBS-----CSEEECCCS---SCEEEEEE----ETTTEEEEEET--TSEEE
T ss_pred CceEEEEECCCCCEEEEEcCCCEEEEEECCCCc-----cceEecCCC---ccEEEEEE----CCCCEEEEEeC--CCcEE
Confidence 334568899999999999999988876654321 111111110 00001122 22344444222 44433
Q ss_pred EEEecCCceeeeccccccCCCCCeEEEEEeecCCCCCeEEEEEeeCCceeEEec
Q 047869 2090 AVSLGTNELIAQNMRHAAGSTSPLVGVTAYKPLSKDKVHCLVLHDDGSLQIYSH 2143 (2233)
Q Consensus 2090 vv~l~pd~I~iQeiK~~~~sSs~vdgva~y~p~s~~rttlLLLcEDGSLrIYsa 2143 (2233)
+.-+...+ .++.++. ....+..++. +.+...++.-.+||.+++|..
T Consensus 314 i~d~~~~~-~~~~~~~---~~~~i~~~~~----s~~~~~l~~~~~dg~i~i~~~ 359 (425)
T 1r5m_A 314 LWSLKQNT-LLALSIV---DGVPIFAGRI----SQDGQKYAVAFMDGQVNVYDL 359 (425)
T ss_dssp EEETTTTE-EEEEEEC---TTCCEEEEEE----CTTSSEEEEEETTSCEEEEEC
T ss_pred EEECCCCc-EeEeccc---CCccEEEEEE----cCCCCEEEEEECCCeEEEEEC
Confidence 33333333 2222222 1333444443 234556777889999999984
No 12
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.88 E-value=0.0074 Score=64.96 Aligned_cols=157 Identities=13% Similarity=0.197 Sum_probs=104.2
Q ss_pred eEEEEeecccCc--cceEEeeccc-ceEEEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeC
Q 047869 1864 FEIVHLAFNSIV--ENYLTVAGYE-DCQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDL 1939 (2233)
Q Consensus 1864 FeVlsLafNP~n--EdyLAVcGLk-DC~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDL 1939 (2233)
-.|..|+|+|.. +++||+++.. .+.|..+...|....+ .+.-...-|..+.|-|..+. |+..+.+ .|+|||+
T Consensus 40 ~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~---~~~~h~~~v~~~~~~~~~~~-l~s~~~dg~v~iwd~ 115 (368)
T 3mmy_A 40 DSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPK---AQQMHTGPVLDVCWSDDGSK-VFTASCDKTAKMWDL 115 (368)
T ss_dssp SCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEE---EEEECSSCEEEEEECTTSSE-EEEEETTSEEEEEET
T ss_pred CceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEE---EeccccCCEEEEEECcCCCE-EEEEcCCCcEEEEEc
Confidence 458899999976 7899988864 5677777664543321 12223567999999997765 5555544 8999999
Q ss_pred cCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEecc
Q 047869 1940 SQDNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSS 2019 (2233)
Q Consensus 1940 S~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~ 2019 (2233)
.... +.. +.-..+.|..+++....+| .+++..+.+|.|+.-++...... ..++. .....++.++
T Consensus 116 ~~~~--~~~-~~~~~~~v~~~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~------~~~~~-----~~~~~~~~~~- 179 (368)
T 3mmy_A 116 SSNQ--AIQ-IAQHDAPVKTIHWIKAPNY-SCVMTGSWDKTLKFWDTRSSNPM------MVLQL-----PERCYCADVI- 179 (368)
T ss_dssp TTTE--EEE-EEECSSCEEEEEEEECSSC-EEEEEEETTSEEEEECSSCSSCS------EEEEC-----SSCEEEEEEE-
T ss_pred CCCC--cee-eccccCceEEEEEEeCCCC-CEEEEccCCCcEEEEECCCCcEE------EEEec-----CCCceEEEec-
Confidence 8654 333 3345678999988766666 57778889999998887632211 11111 1234444444
Q ss_pred ccceeeEEecCCcEEEEEcCCC
Q 047869 2020 TYKLLFLSFQDGTTLVGRLSPN 2041 (2233)
Q Consensus 2020 tl~LLF~SY~~G~Sf~a~Ls~~ 2041 (2233)
.+.+++...+|+..+-.+...
T Consensus 180 -~~~~~~~~~~~~i~~~~~~~~ 200 (368)
T 3mmy_A 180 -YPMAVVATAERGLIVYQLENQ 200 (368)
T ss_dssp -TTEEEEEEGGGCEEEEECSSS
T ss_pred -CCeeEEEeCCCcEEEEEeccc
Confidence 457888888888888777544
No 13
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.83 E-value=0.00013 Score=88.56 Aligned_cols=158 Identities=14% Similarity=0.223 Sum_probs=102.8
Q ss_pred cccccceecccCceEEEeeCCeEEEEechhhhcccccCCcccccccccccccc-ccce-EEEEeecccCccceEEeeccc
Q 047869 1808 SLVKSLLSVSSRGRLAVGEGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRN-IVRF-EIVHLAFNSIVENYLTVAGYE 1885 (2233)
Q Consensus 1808 q~iRqLLSas~rGrLAVaEgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa-~VpF-eVlsLafNP~nEdyLAVcGLk 1885 (2233)
..-|..+.+..+.++.++.|..|-.=+++. . .+-+-|--. .++| +|.++..|| +++|||++|-+
T Consensus 21 ~s~R~~~~~~n~t~i~~a~~n~iR~~~i~~---------~----~~Yk~L~~~~~i~f~~i~qlvlSp-sG~lLAl~g~~ 86 (452)
T 3pbp_A 21 QSPRYIFSSQNGTRIVFIQDNIIRWYNVLT---------D----SLYHSLNFSRHLVLDDTFHVISST-SGDLLCLFNDN 86 (452)
T ss_dssp -CCEEEEEETTTTEEEEEETTEEEEEETTT---------C----SSCEEEECTTTCCCCTTCEEEECT-TSSEEEEECSS
T ss_pred CCCcEEEEEcCCCEEEEEECCEEEEEECCC---------C----CcceEEecCcccccCceeEEEECC-CCCEEEEecCC
Confidence 344455666666677777666663333321 1 112222222 1578 889999999 99999999999
Q ss_pred ceEEEEecCCCceee-----------eeeeeecc--CCceEEEeEEecCCCc--eEEEEecC-eEEEEeCcCCCCCCcEE
Q 047869 1886 DCQVLTLNPRGEVTD-----------RLAIELAL--QGAYIRRVDWVPGSPV--QLMVVTNK-FVKIYDLSQDNISPLHY 1949 (2233)
Q Consensus 1886 DC~VLTfss~GeV~D-----------RL~LeL~L--eg~fIIKa~WLPGSQt--~LAVVT~~-FVKIYDLS~D~lSPvyy 1949 (2233)
+|+|+.+.......+ ...+.+.. ...=|.+|.|=|-+.. .|.|.|.+ -|++||++++..-|+ .
T Consensus 87 ~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~ 165 (452)
T 3pbp_A 87 EIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-V 165 (452)
T ss_dssp EEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-E
T ss_pred eEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-c
Confidence 999999963322222 12222211 1345999999999865 88888888 799999999888888 3
Q ss_pred EEcCC---------CCeeEEEEEEecCCcEEEEEEe--cCCceEE
Q 047869 1950 FTLPD---------DMIVDATLVIASRGKMFLIVLS--ECGSLYR 1983 (2233)
Q Consensus 1950 F~Lps---------GkIrDaTfv~~e~G~~~ILVLS--S~G~LY~ 1983 (2233)
+.-.. ..|.+++|.. |.+-+.+++ +.|.||.
T Consensus 166 L~k~~~~fg~d~~~~ev~S~~Fg~---~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 166 LNKPNNSFGLDARVNDITDLEFSK---DGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp ESCCCSEEESCSSCCCEEEEEECT---TSSCEEEEECTTSCEEEE
T ss_pred hhccccccCCCcccceEEEEEEcC---CCcEEEEEecCCCCCEEE
Confidence 32221 3466667663 435555555 8899995
No 14
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=97.81 E-value=0.0033 Score=74.98 Aligned_cols=187 Identities=15% Similarity=0.146 Sum_probs=112.6
Q ss_pred ccceeccc-CceEEEeeCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecccceEE
Q 047869 1811 KSLLSVSS-RGRLAVGEGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYEDCQV 1889 (2233)
Q Consensus 1811 RqLLSas~-rGrLAVaEgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLkDC~V 1889 (2233)
-++|+.+. +|.+|.+-++++.|+++..+.+.-..+. .++.|.-..++|- |.+|+| ++++|+|+ ++..|
T Consensus 40 ~nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~-----~~~~~~~~~~lp~-V~~l~f---d~~~L~v~--~~~~l 108 (388)
T 1xip_A 40 LQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDS-----TPLTFKWEKEIPD-VIFVCF---HGDQVLVS--TRNAL 108 (388)
T ss_dssp CBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSS-----CCCCCSEEEECTT-EEEEEE---ETTEEEEE--ESSEE
T ss_pred ccEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhcccc-----ccccceEEeeCCC-eeEEEE---CCCEEEEE--cCCcE
Confidence 36777765 5778888889999999999885443211 1144545567888 999999 99999999 55666
Q ss_pred EEecCCCce-eeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEecC
Q 047869 1890 LTLNPRGEV-TDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQDNISPLHYFTLPDDMIVDATLVIASR 1967 (2233)
Q Consensus 1890 LTfss~GeV-~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~ 1967 (2233)
..++-+--. .+.+. ..+ .-+..+.|++.+ +|++|++ .|.||||......+ + ...|+.++ | .+.
T Consensus 109 ~v~dv~sl~~~~~~~---~~~-~~v~~i~~~~p~---~av~~~dG~L~v~dl~~~~~~~-----~-~~~Vs~v~-W-Spk 173 (388)
T 1xip_A 109 YSLDLEELSEFRTVT---SFE-KPVFQLKNVNNT---LVILNSVNDLSALDLRTKSTKQ-----L-AQNVTSFD-V-TNS 173 (388)
T ss_dssp EEEESSSTTCEEEEE---ECS-SCEEEEEECSSE---EEEEETTSEEEEEETTTCCEEE-----E-EESEEEEE-E-CSS
T ss_pred EEEEchhhhccCccc---eee-cceeeEEecCCC---EEEEECCCCEEEEEccCCcccc-----c-cCCceEEE-E-cCC
Confidence 666432111 11111 112 115567788874 7777666 99999999766432 2 23566555 4 355
Q ss_pred CcEEEEEEecCCceEEEEecccCCCcccc-ceeeeeccccc----ccCCeEEEEeccccceeeEEecCC
Q 047869 1968 GKMFLIVLSECGSLYRLELSVEGNVGATP-LKEIIQFNDRE----IHAKGLSLYFSSTYKLLFLSFQDG 2031 (2233)
Q Consensus 1968 G~~~ILVLSS~G~LY~Qels~s~d~g~~~-ltEvvq~~~~q----~~~~GVSVyYS~tl~LLF~SY~~G 2031 (2233)
| +.+...+|.+..-..+ .+... ..++-..|..+ -...-.||.|.++.++| ++|...
T Consensus 174 G---~~vg~~dg~i~~~~~~----~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~fl-v~y~~~ 234 (388)
T 1xip_A 174 Q---LAVLLKDRSFQSFAWR----NGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFL-AVFGNV 234 (388)
T ss_dssp E---EEEEETTSCEEEEEEE----TTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEE-EEEECC
T ss_pred c---eEEEEcCCcEEEEcCC----CccccccceecCCcccccccCCCeeEEEEEEecCCeEE-EEEcCC
Confidence 6 4667778877654332 11111 11111111111 13557889999988777 577643
No 15
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.79 E-value=0.023 Score=60.06 Aligned_cols=190 Identities=10% Similarity=0.037 Sum_probs=115.1
Q ss_pred cccceecccCceEEEe-eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeeccc-ce
Q 047869 1810 VKSLLSVSSRGRLAVG-EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYE-DC 1887 (2233)
Q Consensus 1810 iRqLLSas~rGrLAVa-EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLk-DC 1887 (2233)
|+.+.- ..++++|.+ +.+.|.|+++..--. ..... .-.-.|.+++|+| ++++||++|.. .+
T Consensus 21 v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~-----------~~~~~----~~~~~v~~~~~~~-~~~~l~~~~~dg~i 83 (313)
T 3odt_A 21 VRDVVA-VDDSKVASVSRDGTVRLWSKDDQWL-----------GTVVY----TGQGFLNSVCYDS-EKELLLFGGKDTMI 83 (313)
T ss_dssp EEEEEE-EETTEEEEEETTSEEEEEEESSSEE-----------EEEEE----ECSSCEEEEEEET-TTTEEEEEETTSCE
T ss_pred cEEEEe-cCCCEEEEEEcCCcEEEEECCCCEE-----------EEEee----cCCccEEEEEECC-CCCEEEEecCCCeE
Confidence 444433 556677765 778899999732110 00000 1134578999999 77888887764 33
Q ss_pred EEEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEec
Q 047869 1888 QVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQDNISPLHYFTLPDDMIVDATLVIAS 1966 (2233)
Q Consensus 1888 ~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e 1966 (2233)
++..+..... .+....+.-....|..+.| .+ ..|++.+.+ .|+||| .-.+...+....+.|.++.+.. .
T Consensus 84 ~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~-~~--~~l~~~~~d~~i~~~d----~~~~~~~~~~~~~~v~~~~~~~-~ 153 (313)
T 3odt_A 84 NGVPLFATSG--EDPLYTLIGHQGNVCSLSF-QD--GVVISGSWDKTAKVWK----EGSLVYNLQAHNASVWDAKVVS-F 153 (313)
T ss_dssp EEEETTCCTT--SCC-CEECCCSSCEEEEEE-ET--TEEEEEETTSEEEEEE----TTEEEEEEECCSSCEEEEEEEE-T
T ss_pred EEEEeeecCC--CCcccchhhcccCEEEEEe-cC--CEEEEEeCCCCEEEEc----CCcEEEecccCCCceeEEEEcc-C
Confidence 4555533211 1111122223567888999 33 356666655 999999 5567888888889999998774 3
Q ss_pred CCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccceeeEEecCCcEEEEEcC
Q 047869 1967 RGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSFQDGTTLVGRLS 2039 (2233)
Q Consensus 1967 ~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY~~G~Sf~a~Ls 2039 (2233)
++. .+++.+.+|.|+.-+... .+........+.-.++.+++.-+ ++.+..+|+..+-.+.
T Consensus 154 ~~~-~l~~~~~d~~i~i~d~~~-----------~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~ 213 (313)
T 3odt_A 154 SEN-KFLTASADKTIKLWQNDK-----------VIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMH 213 (313)
T ss_dssp TTT-EEEEEETTSCEEEEETTE-----------EEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETT
T ss_pred CCC-EEEEEECCCCEEEEecCc-----------eEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECC
Confidence 443 677889999999776221 01111111233456678888777 7777778877776664
No 16
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.79 E-value=0.0081 Score=65.85 Aligned_cols=165 Identities=13% Similarity=0.181 Sum_probs=106.6
Q ss_pred eEEEEeecccCccceEEeecccc-eEEEEecCCCceeeeeeeee---------ccCCceEEEeEEecCCCceEEEEecC-
Q 047869 1864 FEIVHLAFNSIVENYLTVAGYED-CQVLTLNPRGEVTDRLAIEL---------ALQGAYIRRVDWVPGSPVQLMVVTNK- 1932 (2233)
Q Consensus 1864 FeVlsLafNP~nEdyLAVcGLkD-C~VLTfss~GeV~DRL~LeL---------~Leg~fIIKa~WLPGSQt~LAVVT~~- 1932 (2233)
-.|..|+|+|.++++||++|... +.|..+... +......... .-...-|..+.|.|.....|+..+.+
T Consensus 44 ~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~ 122 (408)
T 4a11_B 44 GGINTLDIEPVEGRYMLSGGSDGVIVLYDLENS-SRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDK 122 (408)
T ss_dssp SCEEEEEECTTTCCEEEEEETTSCEEEEECCCC-SSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTS
T ss_pred CcEEEEEEecCCCCEEEEEcCCCeEEEEECCCC-cccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCC
Confidence 35778999998899999887643 555555432 2222222111 11256799999999666667777644
Q ss_pred eEEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCe
Q 047869 1933 FVKIYDLSQDNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKG 2012 (2233)
Q Consensus 1933 FVKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~G 2012 (2233)
.|+|||+.... +...+.. .+.+...++........++++.+.+|.|+.-++...... ..++ . ..+.-
T Consensus 123 ~i~iwd~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~------~~~~--~--~~~~v 189 (408)
T 4a11_B 123 TLKVWDTNTLQ--TADVFNF-EETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCS------HILQ--G--HRQEI 189 (408)
T ss_dssp EEEEEETTTTE--EEEEEEC-SSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCC------EEEC--C--CCSCE
T ss_pred eEEEeeCCCCc--cceeccC-CCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCccee------eeec--C--CCCcE
Confidence 89999997643 4455553 456777776654444457888899999999888632111 1111 1 12334
Q ss_pred EEEEeccccc-eeeEEecCCcEEEEEcCCCc
Q 047869 2013 LSLYFSSTYK-LLFLSFQDGTTLVGRLSPNA 2042 (2233)
Q Consensus 2013 VSVyYS~tl~-LLF~SY~~G~Sf~a~Ls~~~ 2042 (2233)
.++.|++.-+ +|+.+..+|+..+-.+....
T Consensus 190 ~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~ 220 (408)
T 4a11_B 190 LAVSWSPRYDYILATASADSRVKLWDVRRAS 220 (408)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEETTCSS
T ss_pred EEEEECCCCCcEEEEEcCCCcEEEEECCCCC
Confidence 5788999888 57778889998887775443
No 17
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.76 E-value=0.073 Score=57.63 Aligned_cols=185 Identities=17% Similarity=0.185 Sum_probs=113.5
Q ss_pred CceEEEe-eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeeccc-ceEEEEecCCC
Q 047869 1819 RGRLAVG-EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYE-DCQVLTLNPRG 1896 (2233)
Q Consensus 1819 rGrLAVa-EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLk-DC~VLTfss~G 1896 (2233)
+.++|.+ ..+.|.|+++..--.. .+ +. .-.-.|..++|+| ++++||.+|-. .+.|.-+. +|
T Consensus 35 ~~~l~s~~~dg~i~iw~~~~~~~~----------~~---~~--~h~~~v~~~~~~~-~~~~l~s~~~d~~i~vwd~~-~~ 97 (312)
T 4ery_A 35 GEWLASSSADKLIKIWGAYDGKFE----------KT---IS--GHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVS-SG 97 (312)
T ss_dssp SSEEEEEETTSCEEEEETTTCCEE----------EE---EC--CCSSCEEEEEECT-TSSEEEEEETTSEEEEEETT-TC
T ss_pred CCEEEEeeCCCeEEEEeCCCcccc----------hh---hc--cCCCceEEEEEcC-CCCEEEEECCCCEEEEEECC-CC
Confidence 4456654 7778888886321000 01 11 1123478899999 66788877653 34454443 23
Q ss_pred ceeeeeeeeeccCCceEEEeEEecCCCceEEEEe-cCeEEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEE
Q 047869 1897 EVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVT-NKFVKIYDLSQDNISPLHYFTLPDDMIVDATLVIASRGKMFLIVL 1975 (2233)
Q Consensus 1897 eV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT-~~FVKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVL 1975 (2233)
+... .+.-....|..+.|-|..+. |+... ...|+|||+... .+...+....+.|...+| .++|. +++..
T Consensus 98 ~~~~----~~~~~~~~v~~~~~~~~~~~-l~s~~~d~~i~iwd~~~~--~~~~~~~~~~~~v~~~~~--~~~~~-~l~~~ 167 (312)
T 4ery_A 98 KCLK----TLKGHSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVKTG--KCLKTLPAHSDPVSAVHF--NRDGS-LIVSS 167 (312)
T ss_dssp CEEE----EEECCSSCEEEEEECSSSSE-EEEEETTSCEEEEETTTC--CEEEEECCCSSCEEEEEE--CTTSS-EEEEE
T ss_pred cEEE----EEcCCCCCEEEEEEcCCCCE-EEEEeCCCcEEEEECCCC--EEEEEecCCCCcEEEEEE--cCCCC-EEEEE
Confidence 3222 22223678999999998765 44444 458999999654 345555555677777664 45665 67788
Q ss_pred ecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccceeeEEecCCcEEEEEcC
Q 047869 1976 SECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSFQDGTTLVGRLS 2039 (2233)
Q Consensus 1976 SS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY~~G~Sf~a~Ls 2039 (2233)
+.+|.|+.-++.... .+... .. .....--++.|++.-+.|+.+-.+|+..+-.+.
T Consensus 168 ~~d~~i~~wd~~~~~-----~~~~~---~~-~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~ 222 (312)
T 4ery_A 168 SYDGLCRIWDTASGQ-----CLKTL---ID-DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 222 (312)
T ss_dssp ETTSCEEEEETTTCC-----EEEEE---CC-SSCCCEEEEEECTTSSEEEEEETTTEEEEEETT
T ss_pred eCCCcEEEEECCCCc-----eeeEE---ec-cCCCceEEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 899999988876321 01111 01 112223457899999999999889987776664
No 18
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.74 E-value=0.019 Score=61.84 Aligned_cols=159 Identities=14% Similarity=0.135 Sum_probs=103.0
Q ss_pred ceEEEEeecccCc--cceEEeeccc-ceEEEEecCCCceeeeeeeeeccCCceEEEeEEecC-----CCceEEEEecC-e
Q 047869 1863 RFEIVHLAFNSIV--ENYLTVAGYE-DCQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPG-----SPVQLMVVTNK-F 1933 (2233)
Q Consensus 1863 pFeVlsLafNP~n--EdyLAVcGLk-DC~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPG-----SQt~LAVVT~~-F 1933 (2233)
.-.|..++|+|.. +++||+++.. .+.|..+....... ..+.-....|..+.|.|+ ....|+....+ .
T Consensus 65 ~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~ 140 (357)
T 3i2n_A 65 AKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPV----YSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGT 140 (357)
T ss_dssp SSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCS----EEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSC
T ss_pred cCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccE----EEEEecccceEEEeeccccccCCCccEEEEEeCCCe
Confidence 4468899999975 7888887754 45555554432111 122223567888988863 22356666555 8
Q ss_pred EEEEeCcCCCCCCcEEEEcCCC----CeeEEEEEE--ecCCcEEEEEEecCCceEEEEecccCCCccccceeeeeccccc
Q 047869 1934 VKIYDLSQDNISPLHYFTLPDD----MIVDATLVI--ASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDRE 2007 (2233)
Q Consensus 1934 VKIYDLS~D~lSPvyyF~LpsG----kIrDaTfv~--~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q 2007 (2233)
|+|||+.... .|...+....| .|.+.++-. ..+| .++++.+.+|.|+.-++.... . +.. ..
T Consensus 141 i~vwd~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~----~-----~~~--~~ 207 (357)
T 3i2n_A 141 VKVWDPRQKD-DPVANMEPVQGENKRDCWTVAFGNAYNQEE-RVVCAGYDNGDIKLFDLRNMA----L-----RWE--TN 207 (357)
T ss_dssp EEEECTTSCS-SCSEEECCCTTSCCCCEEEEEEECCCC-CC-CEEEEEETTSEEEEEETTTTE----E-----EEE--EE
T ss_pred EEEEeCCCCC-CcceeccccCCCCCCceEEEEEEeccCCCC-CEEEEEccCCeEEEEECccCc----e-----eee--cC
Confidence 9999998654 47777777766 677766532 3455 477778899999988876321 0 000 11
Q ss_pred ccCCeEEEEecc---ccceeeEEecCCcEEEEEc
Q 047869 2008 IHAKGLSLYFSS---TYKLLFLSFQDGTTLVGRL 2038 (2233)
Q Consensus 2008 ~~~~GVSVyYS~---tl~LLF~SY~~G~Sf~a~L 2038 (2233)
..+.-.++.+++ .-+.|+.+..+|+..+-.+
T Consensus 208 ~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~ 241 (357)
T 3i2n_A 208 IKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDM 241 (357)
T ss_dssp CSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEE
T ss_pred CCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeC
Confidence 134466788998 7888888888888777655
No 19
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.71 E-value=0.026 Score=60.91 Aligned_cols=163 Identities=11% Similarity=0.057 Sum_probs=108.1
Q ss_pred EEEEeecccC----ccceEEeecccceEEEEecCCCceeeeeeeeecc-CCceEEEeEEecCCC---ceEEEEecC-eEE
Q 047869 1865 EIVHLAFNSI----VENYLTVAGYEDCQVLTLNPRGEVTDRLAIELAL-QGAYIRRVDWVPGSP---VQLMVVTNK-FVK 1935 (2233)
Q Consensus 1865 eVlsLafNP~----nEdyLAVcGLkDC~VLTfss~GeV~DRL~LeL~L-eg~fIIKa~WLPGSQ---t~LAVVT~~-FVK 1935 (2233)
.|.+|+|+|. ...++|.+|-..+.|..+... +....+.-+... .+.-|..+.|-|.+. ..||+.+.+ .|+
T Consensus 20 ~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~ 98 (366)
T 3k26_A 20 PLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQ-GEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIR 98 (366)
T ss_dssp CEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGG-GCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEE
T ss_pred ceEEEEEecccCCCCceEEEECCCCEEEEEEcCCC-cEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEE
Confidence 5789999994 444677777776777777544 444444333222 356799999999965 356766666 899
Q ss_pred EEeCcCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEE
Q 047869 1936 IYDLSQDNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSL 2015 (2233)
Q Consensus 1936 IYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSV 2015 (2233)
|||+... .+...+.-..+.|....|-. .+| .+++..+.+|.|+.-++..... ...+.. .....+.-.++
T Consensus 99 v~d~~~~--~~~~~~~~~~~~i~~~~~~~-~~~-~~l~s~~~dg~i~iwd~~~~~~------~~~~~~-~~~~~~~v~~~ 167 (366)
T 3k26_A 99 IINPITM--QCIKHYVGHGNAINELKFHP-RDP-NLLLSVSKDHALRLWNIQTDTL------VAIFGG-VEGHRDEVLSA 167 (366)
T ss_dssp EECTTTC--CEEEEEESCCSCEEEEEECS-SCT-TEEEEEETTSCEEEEETTTTEE------EEEECS-TTSCSSCEEEE
T ss_pred EEEchhc--eEeeeecCCCCcEEEEEECC-CCC-CEEEEEeCCCeEEEEEeecCeE------EEEecc-cccccCceeEE
Confidence 9998753 56777776788898887542 245 4677888999999988763210 000100 01123445678
Q ss_pred EeccccceeeEEecCCcEEEEEcC
Q 047869 2016 YFSSTYKLLFLSFQDGTTLVGRLS 2039 (2233)
Q Consensus 2016 yYS~tl~LLF~SY~~G~Sf~a~Ls 2039 (2233)
.|+++-+.|+....+|+..+-.+.
T Consensus 168 ~~~~~~~~l~~~~~dg~i~i~d~~ 191 (366)
T 3k26_A 168 DYDLLGEKIMSCGMDHSLKLWRIN 191 (366)
T ss_dssp EECTTSSEEEEEETTSCEEEEESC
T ss_pred EECCCCCEEEEecCCCCEEEEECC
Confidence 888888888888888888776654
No 20
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.69 E-value=0.019 Score=66.19 Aligned_cols=204 Identities=16% Similarity=0.093 Sum_probs=124.6
Q ss_pred ceEEEe-eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecc-cceEEEEecCCCc
Q 047869 1820 GRLAVG-EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGY-EDCQVLTLNPRGE 1897 (2233)
Q Consensus 1820 GrLAVa-EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGL-kDC~VLTfss~Ge 1897 (2233)
..+|++ +.++|.|+++..-........ ....+..+. .-.-+|.+|+++|....+||+++. ..+.|..++..+.
T Consensus 142 ~~lat~~~dg~V~vwd~~~~~~~~~~~~---~~~~~~~~~--~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 216 (430)
T 2xyi_A 142 CVIATKTPSSDVLVFDYTKHPSKPEPSG---ECQPDLRLR--GHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPK 216 (430)
T ss_dssp EEEEEECSSSCEEEEEGGGSCSSCCTTC---CCCCSEEEE--CCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCB
T ss_pred cEEEEECCCCcEEEEECCCcccccCccc---cCCCcEEec--CCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCC
Confidence 456664 788999999976432221100 000111111 122357789999987777777765 3456666655322
Q ss_pred eeeeeee--eeccCCceEEEeEEecCCCceEEEEe-cCeEEEEeCcCCC-CCCcEEEEcCCCCeeEEEEEEecCCcEEEE
Q 047869 1898 VTDRLAI--ELALQGAYIRRVDWVPGSPVQLMVVT-NKFVKIYDLSQDN-ISPLHYFTLPDDMIVDATLVIASRGKMFLI 1973 (2233)
Q Consensus 1898 V~DRL~L--eL~Leg~fIIKa~WLPGSQt~LAVVT-~~FVKIYDLS~D~-lSPvyyF~LpsGkIrDaTfv~~e~G~~~IL 1973 (2233)
....+.. .+.-....|..+.|-|.....+|.++ ...|+|||+.... ..|...+.-..+.|+.++| .++|..+++
T Consensus 217 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~--~p~~~~~l~ 294 (430)
T 2xyi_A 217 EHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSF--NPYSEFILA 294 (430)
T ss_dssp GGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEE--CSSCTTEEE
T ss_pred CCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEe--CCCCCCEEE
Confidence 2111111 11122566999999996666777665 4599999998654 4678888777788887774 466777888
Q ss_pred EEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccce-eeEEecCCcEEEEEcC
Q 047869 1974 VLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKL-LFLSFQDGTTLVGRLS 2039 (2233)
Q Consensus 1974 VLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~L-LF~SY~~G~Sf~a~Ls 2039 (2233)
+-+.+|.|+.-++..... .+.. ++ . -.+.-.+|.+++.-+. |..+-.+|+..+-.++
T Consensus 295 tg~~dg~v~vwd~~~~~~----~~~~-~~--~--h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~ 352 (430)
T 2xyi_A 295 TGSADKTVALWDLRNLKL----KLHS-FE--S--HKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 352 (430)
T ss_dssp EEETTSEEEEEETTCTTS----CSEE-EE--C--CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGG
T ss_pred EEeCCCeEEEEeCCCCCC----CeEE-ee--c--CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCC
Confidence 899999999988874221 1111 11 1 1344667888888754 4444567766665553
No 21
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.68 E-value=0.02 Score=62.29 Aligned_cols=161 Identities=15% Similarity=0.087 Sum_probs=102.0
Q ss_pred EEEEeecccCccceEEeeccc-ceEEEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeCcCC
Q 047869 1865 EIVHLAFNSIVENYLTVAGYE-DCQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQD 1942 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGLk-DC~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D 1942 (2233)
.|.+++|+| ++++||++|.. .+.|..+... +.. ..-.+.-....|..+.|-|..+. |+..+.+ .|+|||+...
T Consensus 10 ~i~~~~~s~-~~~~l~~~~~d~~v~i~~~~~~-~~~--~~~~~~~h~~~v~~~~~~~~~~~-l~~~~~dg~i~vwd~~~~ 84 (372)
T 1k8k_C 10 PISCHAWNK-DRTQIAICPNNHEVHIYEKSGN-KWV--QVHELKEHNGQVTGVDWAPDSNR-IVTCGTDRNAYVWTLKGR 84 (372)
T ss_dssp CCCEEEECT-TSSEEEEECSSSEEEEEEEETT-EEE--EEEEEECCSSCEEEEEEETTTTE-EEEEETTSCEEEEEEETT
T ss_pred CeEEEEECC-CCCEEEEEeCCCEEEEEeCCCC-cEE--eeeeecCCCCcccEEEEeCCCCE-EEEEcCCCeEEEEECCCC
Confidence 356889998 67888888543 3445544322 211 11112223567999999997654 6655554 8999999766
Q ss_pred CCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccc
Q 047869 1943 NISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYK 2022 (2233)
Q Consensus 1943 ~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~ 2022 (2233)
...+...+.-..+.|.+++|- ++|+ ++++.+.+|.++.-++...... .....+..+ ..+.-.++.|+++-+
T Consensus 85 ~~~~~~~~~~~~~~v~~~~~~--~~~~-~l~~~~~d~~v~i~d~~~~~~~---~~~~~~~~~---~~~~i~~~~~~~~~~ 155 (372)
T 1k8k_C 85 TWKPTLVILRINRAARCVRWA--PNEK-KFAVGSGSRVISICYFEQENDW---WVCKHIKKP---IRSTVLSLDWHPNSV 155 (372)
T ss_dssp EEEEEEECCCCSSCEEEEEEC--TTSS-EEEEEETTSSEEEEEEETTTTE---EEEEEECTT---CCSCEEEEEECTTSS
T ss_pred eeeeeEEeecCCCceeEEEEC--CCCC-EEEEEeCCCEEEEEEecCCCcc---eeeeeeecc---cCCCeeEEEEcCCCC
Confidence 544454444456678777754 5564 6777889999998887743211 111111111 134456789999999
Q ss_pred eeeEEecCCcEEEEEcC
Q 047869 2023 LLFLSFQDGTTLVGRLS 2039 (2233)
Q Consensus 2023 LLF~SY~~G~Sf~a~Ls 2039 (2233)
+|+.+..+|+..+-.+.
T Consensus 156 ~l~~~~~dg~i~~~d~~ 172 (372)
T 1k8k_C 156 LLAAGSCDFKCRIFSAY 172 (372)
T ss_dssp EEEEEETTSCEEEEECC
T ss_pred EEEEEcCCCCEEEEEcc
Confidence 99999999988877653
No 22
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.64 E-value=0.016 Score=70.82 Aligned_cols=241 Identities=12% Similarity=0.142 Sum_probs=141.6
Q ss_pred EEEEeecccCccceEEeecccceEEEEec-CCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeCcCC
Q 047869 1865 EIVHLAFNSIVENYLTVAGYEDCQVLTLN-PRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQD 1942 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGLkDC~VLTfs-s~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D 1942 (2233)
.|..++|+| ++++||+++. +-.|.-++ ..|.....+. .....|..+.|-|..+. ||+.+.+ .|+|||+...
T Consensus 15 ~v~~i~~sp-~~~~la~~~~-~g~v~iwd~~~~~~~~~~~----~~~~~v~~~~~s~~~~~-l~~~~~dg~i~vw~~~~~ 87 (814)
T 3mkq_A 15 RVKGIDFHP-TEPWVLTTLY-SGRVEIWNYETQVEVRSIQ----VTETPVRAGKFIARKNW-IIVGSDDFRIRVFNYNTG 87 (814)
T ss_dssp CEEEEEECS-SSSEEEEEET-TSEEEEEETTTTEEEEEEE----CCSSCEEEEEEEGGGTE-EEEEETTSEEEEEETTTC
T ss_pred ceEEEEECC-CCCEEEEEeC-CCEEEEEECCCCceEEEEe----cCCCcEEEEEEeCCCCE-EEEEeCCCeEEEEECCCC
Confidence 478999999 7889998875 44455554 4555544443 23567999999998765 6666654 8999999754
Q ss_pred CCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEecc-cc
Q 047869 1943 NISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSS-TY 2021 (2233)
Q Consensus 1943 ~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~-tl 2021 (2233)
.+...+.-..+.|+..+| .++|. +++..+.+|.|+.-++..... ....+. . ..+.-.++.|++ .-
T Consensus 88 --~~~~~~~~~~~~v~~~~~--s~~~~-~l~~~~~dg~i~vw~~~~~~~-----~~~~~~--~--~~~~v~~~~~~p~~~ 153 (814)
T 3mkq_A 88 --EKVVDFEAHPDYIRSIAV--HPTKP-YVLSGSDDLTVKLWNWENNWA-----LEQTFE--G--HEHFVMCVAFNPKDP 153 (814)
T ss_dssp --CEEEEEECCSSCEEEEEE--CSSSS-EEEEEETTSEEEEEEGGGTSE-----EEEEEE--C--CSSCEEEEEEETTEE
T ss_pred --cEEEEEecCCCCEEEEEE--eCCCC-EEEEEcCCCEEEEEECCCCce-----EEEEEc--C--CCCcEEEEEEEcCCC
Confidence 356666667788888775 35665 567888999999887763210 111111 1 123356788998 77
Q ss_pred ceeeEEecCCcEEEEEcCCCcccccceeEEEEccCCCCCCCcccceeeccCCCceEEEEeccCCCceEEEEecCCceeee
Q 047869 2022 KLLFLSFQDGTTLVGRLSPNAASLSEVSYVFEEQDGKLRSAGLHRWKELLASSGLFFCFSSLKSNAAVAVSLGTNELIAQ 2101 (2233)
Q Consensus 2022 ~LLF~SY~~G~Sf~a~Ls~~~~sv~eis~Vfe~~~gk~~~a~L~qWsEV~~hPGLf~cls~~~sn~pvvv~l~pd~I~iQ 2101 (2233)
++|+.+..+|+..+-.+.... . ...+.. +.........|+....++-++++ . .++...+.-+...+ .++
T Consensus 154 ~~l~~~~~dg~v~vwd~~~~~----~-~~~~~~--~~~~~v~~~~~~~~~~~~~l~~~--~-~dg~i~~~d~~~~~-~~~ 222 (814)
T 3mkq_A 154 STFASGCLDRTVKVWSLGQST----P-NFTLTT--GQERGVNYVDYYPLPDKPYMITA--S-DDLTIKIWDYQTKS-CVA 222 (814)
T ss_dssp EEEEEEETTSEEEEEETTCSS----C-SEEEEC--CCTTCCCEEEECCSTTCCEEEEE--C-TTSEEEEEETTTTE-EEE
T ss_pred CEEEEEeCCCeEEEEECCCCc----c-eeEEec--CCCCCEEEEEEEECCCCCEEEEE--e-CCCEEEEEECCCCc-EEE
Confidence 888889999988887764332 1 111111 11111112334332233334333 2 23433333333333 344
Q ss_pred ccccccCCCCCeEEEEEeecCCCCCeEEEEEeeCCceeEEecc
Q 047869 2102 NMRHAAGSTSPLVGVTAYKPLSKDKVHCLVLHDDGSLQIYSHV 2144 (2233)
Q Consensus 2102 eiK~~~~sSs~vdgva~y~p~s~~rttlLLLcEDGSLrIYsa~ 2144 (2233)
.++. ....+..++. +| +...++.-.+||++++|...
T Consensus 223 ~~~~---~~~~v~~~~~-~~---~~~~l~~~~~dg~v~vwd~~ 258 (814)
T 3mkq_A 223 TLEG---HMSNVSFAVF-HP---TLPIIISGSEDGTLKIWNSS 258 (814)
T ss_dssp EEEC---CSSCEEEEEE-CS---SSSEEEEEETTSCEEEEETT
T ss_pred EEcC---CCCCEEEEEE-cC---CCCEEEEEeCCCeEEEEECC
Confidence 4432 2333444443 33 44467777789999999754
No 23
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.63 E-value=0.035 Score=59.53 Aligned_cols=197 Identities=12% Similarity=0.119 Sum_probs=109.1
Q ss_pred CceEEEe--eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecc--cceEEEEecC
Q 047869 1819 RGRLAVG--EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGY--EDCQVLTLNP 1894 (2233)
Q Consensus 1819 rGrLAVa--EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGL--kDC~VLTfss 1894 (2233)
++.++++ ..+.|.++++.. .. . ++++...+.+-.+..++++| ++++|+|++. ..+.++.++.
T Consensus 4 ~~~l~~~~~~~~~v~~~~~~~--~~-~----------~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~v~~~~~~~ 69 (343)
T 1ri6_A 4 KQTVYIASPESQQIHVWNLNH--EG-A----------LTLTQVVDVPGQVQPMVVSP-DKRYLYVGVRPEFRVLAYRIAP 69 (343)
T ss_dssp EEEEEEEEGGGTEEEEEEECT--TS-C----------EEEEEEEECSSCCCCEEECT-TSSEEEEEETTTTEEEEEEECT
T ss_pred eEEEEEeCCCCCeEEEEEECC--CC-c----------EEEeeeEecCCCCceEEECC-CCCEEEEeecCCCeEEEEEecC
Confidence 4455554 577888888742 00 0 00111112223455788988 7888999988 4666777763
Q ss_pred -CCceeeeeeeeeccCCceEEEeEEecCCCceEEEEe--cCeEEEEeCcCCCCCCcEEEEcCC-CCeeEEEEEEecCCcE
Q 047869 1895 -RGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVT--NKFVKIYDLSQDNISPLHYFTLPD-DMIVDATLVIASRGKM 1970 (2233)
Q Consensus 1895 -~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT--~~FVKIYDLS~D~lSPvyyF~Lps-GkIrDaTfv~~e~G~~ 1970 (2233)
.|+......+ ...+ .+..+.|-|..+. |+++. ...|+|||+. +.-.....-.++. ..+.+.+ +.++|+.
T Consensus 70 ~~~~~~~~~~~--~~~~-~~~~~~~s~dg~~-l~~~~~~~~~i~~~d~~-~~~~~~~~~~~~~~~~~~~~~--~s~dg~~ 142 (343)
T 1ri6_A 70 DDGALTFAAES--ALPG-SLTHISTDHQGQF-VFVGSYNAGNVSVTRLE-DGLPVGVVDVVEGLDGCHSAN--ISPDNRT 142 (343)
T ss_dssp TTCCEEEEEEE--ECSS-CCSEEEECTTSSE-EEEEETTTTEEEEEEEE-TTEEEEEEEEECCCTTBCCCE--ECTTSSE
T ss_pred CCCceeecccc--ccCC-CCcEEEEcCCCCE-EEEEecCCCeEEEEECC-CCccccccccccCCCCceEEE--ECCCCCE
Confidence 3443322122 2223 6677889998765 44444 3469999996 3222112222222 2355544 3567765
Q ss_pred EEEEEecCCceEEEEecccCCCcccccee--eeecccccccCCeEEEEeccccceeeEEe-cCCcEEEEEcCCCc
Q 047869 1971 FLIVLSECGSLYRLELSVEGNVGATPLKE--IIQFNDREIHAKGLSLYFSSTYKLLFLSF-QDGTTLVGRLSPNA 2042 (2233)
Q Consensus 1971 ~ILVLSS~G~LY~Qels~s~d~g~~~ltE--vvq~~~~q~~~~GVSVyYS~tl~LLF~SY-~~G~Sf~a~Ls~~~ 2042 (2233)
..+.-..+|.|+.-++...+. ..... ....+. ...-..+.++++-+.|+++- .+|+..+-.++...
T Consensus 143 l~~~~~~~~~v~~~d~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~ 211 (343)
T 1ri6_A 143 LWVPALKQDRICLFTVSDDGH---LVAQDPAEVTTVE---GAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPH 211 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSC---EEEEEEEEEECST---TCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTT
T ss_pred EEEecCCCCEEEEEEecCCCc---eeeecccccccCC---CCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCC
Confidence 444333789999888763221 11111 122211 22334588999998777664 67777777775443
No 24
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.60 E-value=0.027 Score=60.71 Aligned_cols=162 Identities=14% Similarity=0.070 Sum_probs=99.6
Q ss_pred EEEEeecccCccceEEeecc-cceEEEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeC-cC
Q 047869 1865 EIVHLAFNSIVENYLTVAGY-EDCQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDL-SQ 1941 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGL-kDC~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDL-S~ 1941 (2233)
.|.+++|+| ++++||+++. ..+.|..+.......... ...-...-|..+.|-|..+..|++.+.+ .|+|||+ ..
T Consensus 13 ~v~~~~~s~-~~~~l~~~~~d~~v~iw~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~ 89 (342)
T 1yfq_A 13 YISDIKIIP-SKSLLLITSWDGSLTVYKFDIQAKNVDLL--QSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGS 89 (342)
T ss_dssp CEEEEEEEG-GGTEEEEEETTSEEEEEEEETTTTEEEEE--EEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSS
T ss_pred cEEEEEEcC-CCCEEEEEcCCCeEEEEEeCCCCccccce--eeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccC
Confidence 477999999 7788888775 446677775543211111 1112356799999999966246666654 8999999 65
Q ss_pred CCCCCcEEEEc--CCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEecc
Q 047869 1942 DNISPLHYFTL--PDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSS 2019 (2233)
Q Consensus 1942 D~lSPvyyF~L--psGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~ 2019 (2233)
... ..+.- ..+.|...++- + + ..++..+.+|.|+.-++....+.......+.+... ...+.-.++.+++
T Consensus 90 ~~~---~~~~~~~~~~~v~~l~~~--~-~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~ 160 (342)
T 1yfq_A 90 PSF---QALTNNEANLGICRICKY--G-D-DKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNT--KVKNKIFTMDTNS 160 (342)
T ss_dssp SSE---EECBSCCCCSCEEEEEEE--T-T-TEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSS--SSCCCEEEEEECS
T ss_pred Cce---EeccccCCCCceEEEEeC--C-C-CEEEEEcCCCeEEEEcccccccccccccCCeeeEE--eeCCceEEEEecC
Confidence 532 44444 56678877754 3 4 36778889999998887731111100000001100 1234456777887
Q ss_pred ccceeeEEecCCcEEEEEcCC
Q 047869 2020 TYKLLFLSFQDGTTLVGRLSP 2040 (2233)
Q Consensus 2020 tl~LLF~SY~~G~Sf~a~Ls~ 2040 (2233)
.. +++...+|+..+-.+..
T Consensus 161 ~~--l~~~~~d~~i~i~d~~~ 179 (342)
T 1yfq_A 161 SR--LIVGMNNSQVQWFRLPL 179 (342)
T ss_dssp SE--EEEEESTTEEEEEESSC
T ss_pred Cc--EEEEeCCCeEEEEECCc
Confidence 76 77788888888777654
No 25
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=97.59 E-value=0.037 Score=64.69 Aligned_cols=109 Identities=15% Similarity=0.213 Sum_probs=79.8
Q ss_pred EEEEeecccCccceEEeecccceEEEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeCcCCC
Q 047869 1865 EIVHLAFNSIVENYLTVAGYEDCQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQDN 1943 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGLkDC~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D~ 1943 (2233)
.|-.|+|+| ++++||.+| +|..|.-++.+|+....+.- ...-|..+.|-|..+. ||.+..+ .|+|||++-
T Consensus 18 ~V~~~a~sp-dg~~las~~-~d~~v~iWd~~~~~~~~l~g----h~~~V~~l~fspdg~~-las~~~d~~i~vWd~~~-- 88 (577)
T 2ymu_A 18 SVRGVAFSP-DGQTIASAS-DDKTVKLWNRNGQLLQTLTG----HSSSVWGVAFSPDGQT-IASASDDKTVKLWNRNG-- 88 (577)
T ss_dssp CEEEEEECT-TSSCEEEEE-TTSEEEEECTTSCEEEEEEC----CSSCEEEEEECTTSSE-EEEEETTSCEEEEETTS--
T ss_pred cEEEEEECC-CCCEEEEEe-CCCEEEEEECCCCEEEEEeC----CCCCEEEEEECCCCCE-EEEEeCCCEEEEEECCC--
Confidence 377899999 888999876 56777778888876544321 2456889999998765 6655554 899999753
Q ss_pred CCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEe
Q 047869 1944 ISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLEL 1986 (2233)
Q Consensus 1944 lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qel 1986 (2233)
.+.+.+.-..+.|..++| .++|+ +++..+.+|.+..-+.
T Consensus 89 -~~~~~~~~~~~~v~~~~~--s~d~~-~l~~~~~d~~~~~~~~ 127 (577)
T 2ymu_A 89 -QLLQTLTGHSSSVRGVAF--SPDGQ-TIASASDDKTVKLWNR 127 (577)
T ss_dssp -CEEEEECCCSSCEEEEEE--CTTSS-EEEEEETTSCEEEEET
T ss_pred -CEEEEEECCCCCEEEEEE--CCCCC-EEEEEcCCCceeeccc
Confidence 467777777888988775 46675 5677788888876654
No 26
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.57 E-value=0.031 Score=61.69 Aligned_cols=201 Identities=12% Similarity=0.089 Sum_probs=112.9
Q ss_pred cCceEEEe-eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeeccc-ceEEEEecCC
Q 047869 1818 SRGRLAVG-EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYE-DCQVLTLNPR 1895 (2233)
Q Consensus 1818 ~rGrLAVa-EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLk-DC~VLTfss~ 1895 (2233)
.+..+|.+ ..+.|.|+++..-- .+...+++ .-.-.|..++|+| ++++||.++.. .+.|..+...
T Consensus 22 ~g~~l~~~~~d~~i~iw~~~~~~--------~~~~~~~~-----~h~~~v~~~~~s~-~~~~l~s~s~d~~v~vwd~~~~ 87 (377)
T 3dwl_C 22 QRTEFVTTTATNQVELYEQDGNG--------WKHARTFS-----DHDKIVTCVDWAP-KSNRIVTCSQDRNAYVYEKRPD 87 (377)
T ss_dssp SSSEEECCCSSSCBCEEEEETTE--------EEECCCBC-----CCSSCEEEEEECT-TTCCEEEEETTSSEEEC-----
T ss_pred CCCEEEEecCCCEEEEEEccCCc--------eEEEEEEe-----cCCceEEEEEEeC-CCCEEEEEeCCCeEEEEEcCCC
Confidence 34567776 78889999885210 00001111 1123578999999 46788888753 4555555433
Q ss_pred CceeeeeeeeeccCCceEEEeEEecCCCceEEEEec-CeEEEEeCcCCC-CCCcEEEEc-CCCCeeEEEEEEecCCcEEE
Q 047869 1896 GEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTN-KFVKIYDLSQDN-ISPLHYFTL-PDDMIVDATLVIASRGKMFL 1972 (2233)
Q Consensus 1896 GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~-~FVKIYDLS~D~-lSPvyyF~L-psGkIrDaTfv~~e~G~~~I 1972 (2233)
.... ....+.-....|..+.|-|..+. |+..+. ..|+|||+.... ......+.- -.+.|.+++|- ++|+ ++
T Consensus 88 ~~~~--~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~-~l 161 (377)
T 3dwl_C 88 GTWK--QTLVLLRLNRAATFVRWSPNEDK-FAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWH--PNNV-LL 161 (377)
T ss_dssp -CCC--CEEECCCCSSCEEEEECCTTSSC-CEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEEC--TTSS-EE
T ss_pred Ccee--eeeEecccCCceEEEEECCCCCE-EEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEc--CCCC-EE
Confidence 2011 11112223567999999998765 555554 489999998765 223445554 46778877753 5664 67
Q ss_pred EEEecCCceEEEEecccCCCc---------cccceeeeecccccccCCeEEEEeccccceeeEEecCCcEEEEEcCC
Q 047869 1973 IVLSECGSLYRLELSVEGNVG---------ATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSFQDGTTLVGRLSP 2040 (2233)
Q Consensus 1973 LVLSS~G~LY~Qels~s~d~g---------~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY~~G~Sf~a~Ls~ 2040 (2233)
+..+.+|.|+.-++....-.. .....+.+..- ...+.-.++-||++-++|..+-.+|+..+-.+..
T Consensus 162 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~ 236 (377)
T 3dwl_C 162 AAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY--PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSA 236 (377)
T ss_dssp EEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC--CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECS
T ss_pred EEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc--cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 788899999988885321100 00111112111 1233456788999888888888888776655543
No 27
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.55 E-value=0.026 Score=63.16 Aligned_cols=159 Identities=16% Similarity=0.186 Sum_probs=101.1
Q ss_pred EEEEeecccCccceEEeeccc-ceEEEEecCCCceeeeeeeeecc-CCceEEEeEEecCCCceEEEEecC-eEEEEeCcC
Q 047869 1865 EIVHLAFNSIVENYLTVAGYE-DCQVLTLNPRGEVTDRLAIELAL-QGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQ 1941 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGLk-DC~VLTfss~GeV~DRL~LeL~L-eg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~ 1941 (2233)
.|-.|+||| ++++||.+|.. .+.|..+... ...-+.. +.. -...|..+.|-|..+. ||....+ .|+|||+..
T Consensus 18 ~v~~l~~sp-~g~~las~~~D~~i~iw~~~~~-~~~~~~~--~~~~h~~~v~~~~~sp~g~~-l~s~s~D~~v~iw~~~~ 92 (345)
T 3fm0_A 18 RCWFLAWNP-AGTLLASCGGDRRIRIWGTEGD-SWICKSV--LSEGHQRTVRKVAWSPCGNY-LASASFDATTCIWKKNQ 92 (345)
T ss_dssp CEEEEEECT-TSSCEEEEETTSCEEEEEEETT-EEEEEEE--ECSSCSSCEEEEEECTTSSE-EEEEETTSCEEEEEECC
T ss_pred cEEEEEECC-CCCEEEEEcCCCeEEEEEcCCC-cceeeee--eccccCCcEEEEEECCCCCE-EEEEECCCcEEEEEccC
Confidence 577899999 68899988864 4566655433 2111111 111 1456999999998765 6655554 899999987
Q ss_pred CCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEecccc
Q 047869 1942 DNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTY 2021 (2233)
Q Consensus 1942 D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl 2021 (2233)
....+...+.-..+.|.+++| .++|+ +++.-|.+|.|+.-++...... .....++ . -...--++-|++.-
T Consensus 93 ~~~~~~~~~~~h~~~v~~v~~--sp~~~-~l~s~s~D~~v~iwd~~~~~~~---~~~~~~~--~--h~~~v~~~~~~p~~ 162 (345)
T 3fm0_A 93 DDFECVTTLEGHENEVKSVAW--APSGN-LLATCSRDKSVWVWEVDEEDEY---ECVSVLN--S--HTQDVKHVVWHPSQ 162 (345)
T ss_dssp C-EEEEEEECCCSSCEEEEEE--CTTSS-EEEEEETTSCEEEEEECTTSCE---EEEEEEC--C--CCSCEEEEEECSSS
T ss_pred CCeEEEEEccCCCCCceEEEE--eCCCC-EEEEEECCCeEEEEECCCCCCe---EEEEEec--C--cCCCeEEEEECCCC
Confidence 766566666666778888875 35664 6778889999998888633211 1111111 1 12224467888888
Q ss_pred ceeeEEecCCcEEEEEc
Q 047869 2022 KLLFLSFQDGTTLVGRL 2038 (2233)
Q Consensus 2022 ~LLF~SY~~G~Sf~a~L 2038 (2233)
++|...-.+|+..+-.+
T Consensus 163 ~~l~s~s~d~~i~~w~~ 179 (345)
T 3fm0_A 163 ELLASASYDDTVKLYRE 179 (345)
T ss_dssp SCEEEEETTSCEEEEEE
T ss_pred CEEEEEeCCCcEEEEEe
Confidence 88887777777666544
No 28
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.53 E-value=0.047 Score=66.70 Aligned_cols=191 Identities=10% Similarity=0.112 Sum_probs=118.1
Q ss_pred eccc-CceEEEe-eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecccceEEEEe
Q 047869 1815 SVSS-RGRLAVG-EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYEDCQVLTL 1892 (2233)
Q Consensus 1815 Sas~-rGrLAVa-EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLkDC~VLTf 1892 (2233)
+.+. +..||++ ..+.|.|+++..--.. . + +. .-+-.|..++|+| ++++||++|- +-.|..+
T Consensus 20 ~~sp~~~~la~~~~~g~v~iwd~~~~~~~--------~--~---~~--~~~~~v~~~~~s~-~~~~l~~~~~-dg~i~vw 82 (814)
T 3mkq_A 20 DFHPTEPWVLTTLYSGRVEIWNYETQVEV--------R--S---IQ--VTETPVRAGKFIA-RKNWIIVGSD-DFRIRVF 82 (814)
T ss_dssp EECSSSSEEEEEETTSEEEEEETTTTEEE--------E--E---EE--CCSSCEEEEEEEG-GGTEEEEEET-TSEEEEE
T ss_pred EECCCCCEEEEEeCCCEEEEEECCCCceE--------E--E---Ee--cCCCcEEEEEEeC-CCCEEEEEeC-CCeEEEE
Confidence 4444 4557775 7789999997431100 1 1 11 1123478999999 7788888776 4444444
Q ss_pred c-CCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEecCCcE
Q 047869 1893 N-PRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQDNISPLHYFTLPDDMIVDATLVIASRGKM 1970 (2233)
Q Consensus 1893 s-s~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~ 1970 (2233)
+ .+|+..-.+ .-....|..+.|-|..+. |++.+.+ .|+|||+.... .+...+.-..+.|..++|- +.+..
T Consensus 83 ~~~~~~~~~~~----~~~~~~v~~~~~s~~~~~-l~~~~~dg~i~vw~~~~~~-~~~~~~~~~~~~v~~~~~~--p~~~~ 154 (814)
T 3mkq_A 83 NYNTGEKVVDF----EAHPDYIRSIAVHPTKPY-VLSGSDDLTVKLWNWENNW-ALEQTFEGHEHFVMCVAFN--PKDPS 154 (814)
T ss_dssp ETTTCCEEEEE----ECCSSCEEEEEECSSSSE-EEEEETTSEEEEEEGGGTS-EEEEEEECCSSCEEEEEEE--TTEEE
T ss_pred ECCCCcEEEEE----ecCCCCEEEEEEeCCCCE-EEEEcCCCEEEEEECCCCc-eEEEEEcCCCCcEEEEEEE--cCCCC
Confidence 4 344433322 223577999999998775 6666654 99999997542 3344555556778877754 42335
Q ss_pred EEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEecc--ccceeeEEecCCcEEEEEcC
Q 047869 1971 FLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSS--TYKLLFLSFQDGTTLVGRLS 2039 (2233)
Q Consensus 1971 ~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~--tl~LLF~SY~~G~Sf~a~Ls 2039 (2233)
.+++.+.+|.|+.-++...... . ..... ......++-|++ +-++|+.+..+|+..+-.+.
T Consensus 155 ~l~~~~~dg~v~vwd~~~~~~~--~------~~~~~-~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~ 216 (814)
T 3mkq_A 155 TFASGCLDRTVKVWSLGQSTPN--F------TLTTG-QERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQ 216 (814)
T ss_dssp EEEEEETTSEEEEEETTCSSCS--E------EEECC-CTTCCCEEEECCSTTCCEEEEECTTSEEEEEETT
T ss_pred EEEEEeCCCeEEEEECCCCcce--e------EEecC-CCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence 7888889999998877532111 1 11111 113344567777 88888888888887776653
No 29
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.50 E-value=0.097 Score=57.17 Aligned_cols=118 Identities=14% Similarity=0.194 Sum_probs=80.7
Q ss_pred EEEEeecccCccceEEeeccc-ceEEEEecCC-CceeeeeeeeeccCCceEEEeEEecCC-CceEEEEecC-eEEEEeCc
Q 047869 1865 EIVHLAFNSIVENYLTVAGYE-DCQVLTLNPR-GEVTDRLAIELALQGAYIRRVDWVPGS-PVQLMVVTNK-FVKIYDLS 1940 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGLk-DC~VLTfss~-GeV~DRL~LeL~Leg~fIIKa~WLPGS-Qt~LAVVT~~-FVKIYDLS 1940 (2233)
.|..++|+| ++++||.+|.. .+.|..++.. +.... .+.--...|..+.|-|.. ...||....+ .|+|||+.
T Consensus 11 ~V~~~~~s~-~g~~las~s~D~~v~iw~~~~~~~~~~~----~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~ 85 (297)
T 2pm7_B 11 MIHDAVMDY-YGKRMATCSSDKTIKIFEVEGETHKLID----TLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEE 85 (297)
T ss_dssp CEEEEEECT-TSSEEEEEETTSCEEEEEBCSSCBCCCE----EECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBS
T ss_pred ceEEEEECC-CCCEEEEEeCCCEEEEEecCCCCcEEEE----EEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcC
Confidence 477899988 67888888854 3555555422 22111 111125679999998642 3456666555 89999998
Q ss_pred CCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecc
Q 047869 1941 QDNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSV 1988 (2233)
Q Consensus 1941 ~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~ 1988 (2233)
.....+...+....+.|.+++|-..+.|. +++..|.+|.|..-++..
T Consensus 86 ~~~~~~~~~~~~h~~~v~~v~~~p~~~g~-~l~s~s~d~~v~~wd~~~ 132 (297)
T 2pm7_B 86 NGRWSQIAVHAVHSASVNSVQWAPHEYGP-MLLVASSDGKVSVVEFKE 132 (297)
T ss_dssp SSCBCCCEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEEBCS
T ss_pred CCceEEEEEeecCCCceeEEEeCcCCCCc-EEEEEECCCcEEEEEecC
Confidence 76666777777778889998876544464 677889999999888763
No 30
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.48 E-value=0.096 Score=56.45 Aligned_cols=164 Identities=13% Similarity=0.128 Sum_probs=105.1
Q ss_pred eEEEEeecccCccceEEeeccc-ceEEEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeCcC
Q 047869 1864 FEIVHLAFNSIVENYLTVAGYE-DCQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQ 1941 (2233)
Q Consensus 1864 FeVlsLafNP~nEdyLAVcGLk-DC~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~ 1941 (2233)
-.|.+|+|+| ++++||+++.. .+.|..+. +|+....+ .-....|..+.|-|..+. |+..+.+ .|+|||+..
T Consensus 33 ~~v~~~~~s~-~~~~l~~~~~dg~i~vwd~~-~~~~~~~~----~~h~~~v~~~~~~~~~~~-l~s~~~dg~i~iwd~~~ 105 (369)
T 3zwl_B 33 RPLTQVKYNK-EGDLLFSCSKDSSASVWYSL-NGERLGTL----DGHTGTIWSIDVDCFTKY-CVTGSADYSIKLWDVSN 105 (369)
T ss_dssp SCEEEEEECT-TSCEEEEEESSSCEEEEETT-TCCEEEEE----CCCSSCEEEEEECTTSSE-EEEEETTTEEEEEETTT
T ss_pred ceEEEEEEcC-CCCEEEEEeCCCEEEEEeCC-Cchhhhhh----hhcCCcEEEEEEcCCCCE-EEEEeCCCeEEEEECCC
Confidence 3477999999 78889888754 35555553 44433322 223567999999997654 5555554 899999976
Q ss_pred CCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecC-----CceEEEEecccCCCccccce---eeeecccccccCCeE
Q 047869 1942 DNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSEC-----GSLYRLELSVEGNVGATPLK---EIIQFNDREIHAKGL 2013 (2233)
Q Consensus 1942 D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~-----G~LY~Qels~s~d~g~~~lt---Evvq~~~~q~~~~GV 2013 (2233)
.. +...+. ..+.|..++| .++|. ++++.+.+ |.|+.-++............ .............-.
T Consensus 106 ~~--~~~~~~-~~~~v~~~~~--~~~~~-~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (369)
T 3zwl_B 106 GQ--CVATWK-SPVPVKRVEF--SPCGN-YFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAAT 179 (369)
T ss_dssp CC--EEEEEE-CSSCEEEEEE--CTTSS-EEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEE
T ss_pred Cc--EEEEee-cCCCeEEEEE--ccCCC-EEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCcccee
Confidence 54 455555 5567777664 45675 55666666 99998888744322111111 111111111122567
Q ss_pred EEEeccccceeeEEecCCcEEEEEcCC
Q 047869 2014 SLYFSSTYKLLFLSFQDGTTLVGRLSP 2040 (2233)
Q Consensus 2014 SVyYS~tl~LLF~SY~~G~Sf~a~Ls~ 2040 (2233)
++.+++.-+.|++...+|+..+-.+..
T Consensus 180 ~~~~~~~~~~l~~~~~dg~i~i~d~~~ 206 (369)
T 3zwl_B 180 VAGWSTKGKYIIAGHKDGKISKYDVSN 206 (369)
T ss_dssp EEEECGGGCEEEEEETTSEEEEEETTT
T ss_pred EEEEcCCCCEEEEEcCCCEEEEEECCC
Confidence 889999999999999999888877654
No 31
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.48 E-value=0.076 Score=57.61 Aligned_cols=198 Identities=14% Similarity=0.121 Sum_probs=119.0
Q ss_pred cCceEEEe-eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccC-ccceEEeeccc-ceEEEEecC
Q 047869 1818 SRGRLAVG-EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSI-VENYLTVAGYE-DCQVLTLNP 1894 (2233)
Q Consensus 1818 ~rGrLAVa-EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~-nEdyLAVcGLk-DC~VLTfss 1894 (2233)
.+..||.+ ..+.|.|+++..- + .. .+..+. .-.-.|..|+|+|. ++++||.++.. .+.|..+..
T Consensus 22 ~~~~l~~~~~dg~i~iw~~~~~----~-----~~--~~~~~~--~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 88 (379)
T 3jrp_A 22 YGKRLATCSSDKTIKIFEVEGE----T-----HK--LIDTLT--GHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEEN 88 (379)
T ss_dssp SSSEEEEEETTSCEEEEEEETT----E-----EE--EEEEEC--CCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEET
T ss_pred CCCEEEEEECCCcEEEEecCCC----c-----ce--eeeEec--CCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCC
Confidence 34567776 7788999998521 0 00 001111 11345789999765 47888887763 456666543
Q ss_pred CCceeeeeeeeeccCCceEEEeEEecCC-CceEEEEecC-eEEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEec------
Q 047869 1895 RGEVTDRLAIELALQGAYIRRVDWVPGS-PVQLMVVTNK-FVKIYDLSQDNISPLHYFTLPDDMIVDATLVIAS------ 1966 (2233)
Q Consensus 1895 ~GeV~DRL~LeL~Leg~fIIKa~WLPGS-Qt~LAVVT~~-FVKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e------ 1966 (2233)
. ... ....+......|..+.|-|.. ...|++++.+ .|+|||+......+...+.-..+.|...++-...
T Consensus 89 ~-~~~--~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 165 (379)
T 3jrp_A 89 G-RWS--QIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE 165 (379)
T ss_dssp T-EEE--EEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC------
T ss_pred C-cee--EeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccccccc
Confidence 2 211 111222235679999999983 2346655555 8999999988777777777778888888765321
Q ss_pred -----CCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccc---cceeeEEecCCcEEEEEc
Q 047869 1967 -----RGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSST---YKLLFLSFQDGTTLVGRL 2038 (2233)
Q Consensus 1967 -----~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~t---l~LLF~SY~~G~Sf~a~L 2038 (2233)
+| ..+++.+.+|.|+.-++...... ......+ .. -.+.-.++.|+++ -++|...-.+|+..+-.+
T Consensus 166 ~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~--~~--h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~ 238 (379)
T 3jrp_A 166 HNGTKES-RKFVTGGADNLVKIWKYNSDAQT--YVLESTL--EG--HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQ 238 (379)
T ss_dssp ----CTT-CEEEEEETTSCEEEEEEETTTTE--EEEEEEE--CC--CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEE
T ss_pred ccCCCCC-CEEEEEeCCCeEEEEEecCCCcc--eeeEEEE--ec--ccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeC
Confidence 34 47788899999999888732211 1111111 11 1222446777877 666666666666555443
No 32
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.48 E-value=0.044 Score=58.76 Aligned_cols=206 Identities=12% Similarity=0.094 Sum_probs=117.8
Q ss_pred eecccCc-eEEEeeC--CeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecccc--eE
Q 047869 1814 LSVSSRG-RLAVGEG--DKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYED--CQ 1888 (2233)
Q Consensus 1814 LSas~rG-rLAVaEg--dKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLkD--C~ 1888 (2233)
++.+..| +|++... ++|.++++.. .+ . +++++..-+.+-.+..++++| ++++|+|++..+ +.
T Consensus 43 ~~~spdg~~l~~~~~~~~~v~~~~~~~----~~-----~---~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~i~ 109 (343)
T 1ri6_A 43 MVVSPDKRYLYVGVRPEFRVLAYRIAP----DD-----G---ALTFAAESALPGSLTHISTDH-QGQFVFVGSYNAGNVS 109 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECT----TT-----C---CEEEEEEEECSSCCSEEEECT-TSSEEEEEETTTTEEE
T ss_pred EEECCCCCEEEEeecCCCeEEEEEecC----CC-----C---ceeeccccccCCCCcEEEEcC-CCCEEEEEecCCCeEE
Confidence 4555554 4777633 7999988741 01 0 011111111122456888988 677888888755 56
Q ss_pred EEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEE--ecCeEEEEeCcC-CCCCCcE--EEEcCCC-CeeEEEE
Q 047869 1889 VLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVV--TNKFVKIYDLSQ-DNISPLH--YFTLPDD-MIVDATL 1962 (2233)
Q Consensus 1889 VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVV--T~~FVKIYDLS~-D~lSPvy--yF~LpsG-kIrDaTf 1962 (2233)
++.++ +|.....+.. .-.+..+..+.|-|..+. |+++ ....|++||+.. ..+.+.. .+..+.| .++.++
T Consensus 110 ~~d~~-~~~~~~~~~~--~~~~~~~~~~~~s~dg~~-l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~- 184 (343)
T 1ri6_A 110 VTRLE-DGLPVGVVDV--VEGLDGCHSANISPDNRT-LWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMV- 184 (343)
T ss_dssp EEEEE-TTEEEEEEEE--ECCCTTBCCCEECTTSSE-EEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEE-
T ss_pred EEECC-CCcccccccc--ccCCCCceEEEECCCCCE-EEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEE-
Confidence 66665 4442222211 112445777889998765 4444 357999999987 4444433 5566655 455544
Q ss_pred EEecCCcEEEEEEecCCceEEEEecccCCCccccceeeee-cccccc-cCCeEEEEeccccceeeEEe-cCCcEEEEEcC
Q 047869 1963 VIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQ-FNDREI-HAKGLSLYFSSTYKLLFLSF-QDGTTLVGRLS 2039 (2233)
Q Consensus 1963 v~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq-~~~~q~-~~~GVSVyYS~tl~LLF~SY-~~G~Sf~a~Ls 2039 (2233)
+.++|+..++.-+.+|.++.-++.... +.......+. .+.... ......+.++++-+.||++. .+|+..+-.+.
T Consensus 185 -~~pdg~~l~~~~~~~~~i~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 185 -FHPNEQYAYCVNELNSSVDVWELKDPH--GNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp -ECTTSSEEEEEETTTTEEEEEESSCTT--SCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred -ECCCCCEEEEEeCCCCEEEEEEecCCC--CcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence 467887555555588999888876322 1122111121 222111 22344689999999999887 56776666665
Q ss_pred C
Q 047869 2040 P 2040 (2233)
Q Consensus 2040 ~ 2040 (2233)
.
T Consensus 262 ~ 262 (343)
T 1ri6_A 262 E 262 (343)
T ss_dssp T
T ss_pred C
Confidence 3
No 33
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.46 E-value=0.011 Score=73.97 Aligned_cols=163 Identities=13% Similarity=0.141 Sum_probs=105.8
Q ss_pred EEEEeecccCccceEEeeccc-ceEEEEecCCCceeeeeeeeeccCCceEEEeEEecCC-CceEEEEecC-eEEEEeCcC
Q 047869 1865 EIVHLAFNSIVENYLTVAGYE-DCQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGS-PVQLMVVTNK-FVKIYDLSQ 1941 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGLk-DC~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGS-Qt~LAVVT~~-FVKIYDLS~ 1941 (2233)
.|..++||| ++++||++|.. .++|..+... + .+..-.+.-...-|..+.|-|.. ...|+..+.+ .|+|||+..
T Consensus 11 ~V~~l~~s~-dg~~latg~~dg~I~vwd~~~~-~--~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~ 86 (753)
T 3jro_A 11 LIHDAVLDY-YGKRLATCSSDKTIKIFEVEGE-T--HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEEN 86 (753)
T ss_dssp CEEEECCCS-SSCCEEEEETTTEEEEEEEETT-E--EEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEET
T ss_pred eeEEEEECC-CCCeEEEEECCCcEEEEecCCC-C--CccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCC
Confidence 477899999 56788888754 3556655421 1 11111222225679999998863 3356666665 899999998
Q ss_pred CCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEecc--
Q 047869 1942 DNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSS-- 2019 (2233)
Q Consensus 1942 D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~-- 2019 (2233)
....+...+.-..+.|..++|-.+..|. .+++.+.+|.|+.-++..........+ .. ..+.-.++.+++
T Consensus 87 ~~~~~~~~~~~h~~~V~~v~~sp~~~~~-~l~sgs~dg~I~vwdl~~~~~~~~~~~------~~--~~~~v~~l~~~p~~ 157 (753)
T 3jro_A 87 GRWSQIAVHAVHSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGTTSPIII------DA--HAIGVNSASWAPAT 157 (753)
T ss_dssp TEEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCSSSCCCCEEE------EC--CSSCEEEEEECCCC
T ss_pred CcccccccccCCCCCeEEEEECCCCCCC-EEEEEeCCCcEEEEEeecCCCcceeEe------ec--CCCceEEEEecCcc
Confidence 7666777787778889988865432254 677888999999988874322111111 11 133456677777
Q ss_pred -----------ccceeeEEecCCcEEEEEcCC
Q 047869 2020 -----------TYKLLFLSFQDGTTLVGRLSP 2040 (2233)
Q Consensus 2020 -----------tl~LLF~SY~~G~Sf~a~Ls~ 2040 (2233)
.-++|..+..+|+..+-.+..
T Consensus 158 ~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~ 189 (753)
T 3jro_A 158 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNS 189 (753)
T ss_dssp ---------CGGGCCEEEEETTSCEEEEEEET
T ss_pred cccccccccCCCCCEEEEEECCCeEEEEeccC
Confidence 477888888888877766643
No 34
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.45 E-value=0.02 Score=64.55 Aligned_cols=203 Identities=13% Similarity=0.159 Sum_probs=121.0
Q ss_pred ceecccCceEEE---eeCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeeccc-ceE
Q 047869 1813 LLSVSSRGRLAV---GEGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYE-DCQ 1888 (2233)
Q Consensus 1813 LLSas~rGrLAV---aEgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLk-DC~ 1888 (2233)
.++++......+ ..++.|.|+++.+--... ..+..+.. -.-.|..++|+|.++++||+++.. .+.
T Consensus 39 ~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~---------~~~~~~~~--h~~~V~~~~~~p~~~~~l~s~s~dg~v~ 107 (402)
T 2aq5_A 39 FCAVNPKFMALICEASGGGAFLVLPLGKTGRVD---------KNVPLVCG--HTAPVLDIAWCPHNDNVIASGSEDCTVM 107 (402)
T ss_dssp SEEECSSEEEEEBCCSSSCCEEEEETTCCEECC---------TTCCCBCC--CSSCEEEEEECTTCTTEEEEEETTSEEE
T ss_pred cEEECCCeEEEEEEEcCCCEEEEEECccCCCCC---------CCCceEec--CCCCEEEEEeCCCCCCEEEEEeCCCeEE
Confidence 466666554333 467899999884311100 01111111 123588999999889999988754 245
Q ss_pred EEEecCCCceee--eeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeCcCCCCCCcEEE--EcCCCCeeEEEEE
Q 047869 1889 VLTLNPRGEVTD--RLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQDNISPLHYF--TLPDDMIVDATLV 1963 (2233)
Q Consensus 1889 VLTfss~GeV~D--RL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D~lSPvyyF--~LpsGkIrDaTfv 1963 (2233)
|..+...+.... +....+.-....|..+.|-|..+..|+..+.+ .|+|||+... .+...+ .-..+.|..+++-
T Consensus 108 vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~v~~~~~~ 185 (402)
T 2aq5_A 108 VWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTG--AAVLTLGPDVHPDTIYSVDWS 185 (402)
T ss_dssp EEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTT--EEEEEECTTTCCSCEEEEEEC
T ss_pred EEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCC--CccEEEecCCCCCceEEEEEC
Confidence 555544332111 11112222356799999999987778777766 7999999854 344444 3356678777753
Q ss_pred EecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccceeeEEe---cCCcEEEEEcC
Q 047869 1964 IASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSF---QDGTTLVGRLS 2039 (2233)
Q Consensus 1964 ~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY---~~G~Sf~a~Ls 2039 (2233)
++|. ++++.+.+|.|+.-++.... ...............++.|+++-++|...+ .+|+..+-.+.
T Consensus 186 --~~~~-~l~~~~~d~~i~iwd~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~ 253 (402)
T 2aq5_A 186 --RDGA-LICTSCRDKRVRVIEPRKGT--------VVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTK 253 (402)
T ss_dssp --TTSS-CEEEEETTSEEEEEETTTTE--------EEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETT
T ss_pred --CCCC-EEEEEecCCcEEEEeCCCCc--------eeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCc
Confidence 5664 67778899999988876311 011110111122246678888888888875 56666555543
No 35
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.44 E-value=0.021 Score=65.66 Aligned_cols=194 Identities=15% Similarity=0.112 Sum_probs=118.7
Q ss_pred CceEEEe-eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecccceEEEEecCCCc
Q 047869 1819 RGRLAVG-EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYEDCQVLTLNPRGE 1897 (2233)
Q Consensus 1819 rGrLAVa-EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLkDC~VLTfss~Ge 1897 (2233)
...||++ ..|.|.|+++..- ++..+.++. .-.-.|.+|+|+|.++++|+.+|. |..|.-++-++.
T Consensus 132 ~~~lasGs~dg~i~lWd~~~~-----------~~~~~~~~~--gH~~~V~~l~f~p~~~~~l~s~s~-D~~v~iwd~~~~ 197 (435)
T 4e54_B 132 PSTVAVGSKGGDIMLWNFGIK-----------DKPTFIKGI--GAGGSITGLKFNPLNTNQFYASSM-EGTTRLQDFKGN 197 (435)
T ss_dssp TTCEEEEETTSCEEEECSSCC-----------SCCEEECCC--SSSCCCCEEEECSSCTTEEEEECS-SSCEEEEETTSC
T ss_pred CCEEEEEeCCCEEEEEECCCC-----------CceeEEEcc--CCCCCEEEEEEeCCCCCEEEEEeC-CCEEEEeeccCC
Confidence 3468886 7789999987321 111111110 112246799999999999998885 444555554543
Q ss_pred eeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEe
Q 047869 1898 VTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQDNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLS 1976 (2233)
Q Consensus 1898 V~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLS 1976 (2233)
....+ ....-....+..+.|-|..+. ||..+.+ .|+|||+... +...+..-.+.|..++| .+.|..+++.-+
T Consensus 198 ~~~~~-~~~~~~~~~~~~~~~~~~~~~-l~~g~~dg~i~~wd~~~~---~~~~~~~h~~~v~~v~~--~p~~~~~~~s~s 270 (435)
T 4e54_B 198 ILRVF-ASSDTINIWFCSLDVSASSRM-VVTGDNVGNVILLNMDGK---ELWNLRMHKKKVTHVAL--NPCCDWFLATAS 270 (435)
T ss_dssp EEEEE-ECCSSCSCCCCCEEEETTTTE-EEEECSSSBEEEEESSSC---BCCCSBCCSSCEEEEEE--CTTCSSEEEEEE
T ss_pred ceeEE-eccCCCCccEEEEEECCCCCE-EEEEeCCCcEeeeccCcc---eeEEEecccceEEeeee--cCCCceEEEEec
Confidence 32211 111112445777889888754 5555554 8999998643 34445555677887764 466777778888
Q ss_pred cCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccceeeEEecCCcEEEEEcCC
Q 047869 1977 ECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSFQDGTTLVGRLSP 2040 (2233)
Q Consensus 1977 S~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY~~G~Sf~a~Ls~ 2040 (2233)
.+|.|++-++........+... .. -.+.--++.||++-++|+..-.+|+..+-.+..
T Consensus 271 ~d~~v~iwd~~~~~~~~~~~~~-----~~--h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~ 327 (435)
T 4e54_B 271 VDQTVKIWDLRQVRGKASFLYS-----LP--HRHPVNAACFSPDGARLLTTDQKSEIRVYSASQ 327 (435)
T ss_dssp TTSBCCEEETTTCCSSSCCSBC-----CB--CSSCEEECCBCTTSSEEEEEESSSCEEEEESSS
T ss_pred CcceeeEEecccccccceEEEe-----ee--ccccccceeECCCCCeeEEEcCCCEEEEEECCC
Confidence 9999998887643222111110 00 122234678999989998888889887766543
No 36
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=97.43 E-value=0.036 Score=61.49 Aligned_cols=190 Identities=9% Similarity=0.072 Sum_probs=108.2
Q ss_pred eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeeccc-ceEEEEecCCCceeeeeee
Q 047869 1826 EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYE-DCQVLTLNPRGEVTDRLAI 1904 (2233)
Q Consensus 1826 EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLk-DC~VLTfss~GeV~DRL~L 1904 (2233)
+.++|.|+++..--.. +++.....+-.|..++|+| ++++||+++.. .+.|..+.....- .+...
T Consensus 43 ~d~~v~iw~~~~~~~~-------------~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~v~vw~~~~~~~~-~~~~~ 107 (416)
T 2pm9_A 43 TDSSLELWSLLAADSE-------------KPIASLQVDSKFNDLDWSH-NNKIIAGALDNGSLELYSTNEANNA-INSMA 107 (416)
T ss_dssp CCCCCEEEESSSGGGC-------------SCSCCCCCSSCEEEEEECS-SSSCEEEEESSSCEEEECCSSTTSC-CCEEE
T ss_pred CCCeEEEEEccCCCCC-------------cEEEEEecCCceEEEEECC-CCCeEEEEccCCeEEEeeccccccc-ccchh
Confidence 6678999987432110 1111222344688999998 67788887653 5566655441100 01111
Q ss_pred eeccCCceEEEeEEecCCCceEEEEecC-eEEEEeCcCCCCCCcE-------EEEcCCCCeeEEEEEEecCCcEEEEEEe
Q 047869 1905 ELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQDNISPLH-------YFTLPDDMIVDATLVIASRGKMFLIVLS 1976 (2233)
Q Consensus 1905 eL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D~lSPvy-------yF~LpsGkIrDaTfv~~e~G~~~ILVLS 1976 (2233)
.+.-....|..+.|-|.....|+..+.+ .|+|||+......+.. .+.-..+.|..++| .++|..+++..+
T Consensus 108 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~~~~ 185 (416)
T 2pm9_A 108 RFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAW--NQSLAHVFASAG 185 (416)
T ss_dssp ECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEE--CSSCTTEEEEES
T ss_pred hccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEe--CCCCCcEEEEEc
Confidence 2222356788999999755567766654 8999999877632211 11224566777765 355556788889
Q ss_pred cCCceEEEEecccCCCccccceeeeeccccc--ccCCeEEEEecccc-ceeeEEecCC---cEEEEEc
Q 047869 1977 ECGSLYRLELSVEGNVGATPLKEIIQFNDRE--IHAKGLSLYFSSTY-KLLFLSFQDG---TTLVGRL 2038 (2233)
Q Consensus 1977 S~G~LY~Qels~s~d~g~~~ltEvvq~~~~q--~~~~GVSVyYS~tl-~LLF~SY~~G---~Sf~a~L 2038 (2233)
.+|.|+.-++..... ...+...... ....-.++.+++.- ++|+....+| +..+-.+
T Consensus 186 ~dg~v~iwd~~~~~~------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~ 247 (416)
T 2pm9_A 186 SSNFASIWDLKAKKE------VIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDL 247 (416)
T ss_dssp SSSCEEEEETTTTEE------EEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEET
T ss_pred CCCCEEEEECCCCCc------ceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeC
Confidence 999999888763210 1111111100 02345667888875 4566666665 5544444
No 37
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=97.42 E-value=0.014 Score=64.63 Aligned_cols=169 Identities=9% Similarity=0.116 Sum_probs=102.8
Q ss_pred EEEEeecccCccceEEeecc---------cc--eEEEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-
Q 047869 1865 EIVHLAFNSIVENYLTVAGY---------ED--CQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK- 1932 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGL---------kD--C~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~- 1932 (2233)
+|..++|+|..+++||+++. .| +.|..+...... +...... ...-|..+.|-|..+. ||..+.+
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~--~~~~~~~-~~~~v~~~~~s~~~~~-l~~~~~dg 89 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSE--KPIASLQ-VDSKFNDLDWSHNNKI-IAGALDNG 89 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGC--SCSCCCC-CSSCEEEEEECSSSSC-EEEEESSS
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCC--cEEEEEe-cCCceEEEEECCCCCe-EEEEccCC
Confidence 45679999977778888733 23 444444332211 1111111 2456999999998764 6666554
Q ss_pred eEEEEeCcCCC--CCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccC
Q 047869 1933 FVKIYDLSQDN--ISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHA 2010 (2233)
Q Consensus 1933 FVKIYDLS~D~--lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~ 2010 (2233)
.|+|||+.... ..+...+.-..+.|..++|- +++..+++..+.+|.|+.-++.........+..-.+. ......+
T Consensus 90 ~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~-~~~~~~~ 166 (416)
T 2pm9_A 90 SLELYSTNEANNAINSMARFSNHSSSVKTVKFN--AKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPG-QSMSSVD 166 (416)
T ss_dssp CEEEECCSSTTSCCCEEEECCCSSSCCCEEEEC--SSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCC-CSCCSSC
T ss_pred eEEEeecccccccccchhhccCCccceEEEEEc--CCCCCEEEEEcCCCeEEEEECCCCccccccccccccc-cccCCCC
Confidence 99999998733 33566666667888888864 4434578888899999988876432111000000000 0011123
Q ss_pred CeEEEEeccc-cceeeEEecCCcEEEEEcCC
Q 047869 2011 KGLSLYFSST-YKLLFLSFQDGTTLVGRLSP 2040 (2233)
Q Consensus 2011 ~GVSVyYS~t-l~LLF~SY~~G~Sf~a~Ls~ 2040 (2233)
.-.++.++++ -++|.....+|+..+-.+..
T Consensus 167 ~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~ 197 (416)
T 2pm9_A 167 EVISLAWNQSLAHVFASAGSSNFASIWDLKA 197 (416)
T ss_dssp CCCEEEECSSCTTEEEEESSSSCEEEEETTT
T ss_pred CeeEEEeCCCCCcEEEEEcCCCCEEEEECCC
Confidence 3557888988 67777778889888877644
No 38
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.41 E-value=0.046 Score=61.86 Aligned_cols=160 Identities=16% Similarity=0.177 Sum_probs=88.8
Q ss_pred cceEEEEeecccCccceEEeecc-----cceEEEEecC-CCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecCeEE
Q 047869 1862 VRFEIVHLAFNSIVENYLTVAGY-----EDCQVLTLNP-RGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNKFVK 1935 (2233)
Q Consensus 1862 VpFeVlsLafNP~nEdyLAVcGL-----kDC~VLTfss-~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~FVK 1935 (2233)
-.-.|-+|+|+| ++.+||.+|- .|-.|..++. .|.-...+.....--..-|..+.|.|..+ .++......||
T Consensus 41 H~~~V~~v~fSp-DG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~ 118 (357)
T 4g56_B 41 MEVQIGAVRYRR-DGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVE 118 (357)
T ss_dssp CCSEEEEEEECS-SSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCEE
T ss_pred ccCCEEEEEECC-CCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEEE
Confidence 345688999999 8899999885 3555555532 33222222222211234589999999863 34444445899
Q ss_pred EEeCcCCCCCCcEEEEcC--CCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeE
Q 047869 1936 IYDLSQDNISPLHYFTLP--DDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGL 2013 (2233)
Q Consensus 1936 IYDLS~D~lSPvyyF~Lp--sGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GV 2013 (2233)
|||+......++..+... .+.|..++| .++|+ +++..+.+|.|+.-++.... ....... -.+.--
T Consensus 119 lWd~~~~~~~~~~~~~~~~h~~~V~~v~~--spdg~-~l~sgs~dg~v~iwd~~~~~--------~~~~~~~--h~~~v~ 185 (357)
T 4g56_B 119 LWEILEKESLLVNKFAKYEHDDIVKTLSV--FSDGT-QAVSGGKDFSVKVWDLSQKA--------VLKSYNA--HSSEVN 185 (357)
T ss_dssp EC--------CCCCEEECCCSSCEEEEEE--CSSSS-EEEEEETTSCEEEEETTTTE--------EEEEECC--CSSCEE
T ss_pred EeeccccceeEEEeeccCCCCCCEEEEEE--CCCCC-EEEEEeCCCeEEEEECCCCc--------EEEEEcC--CCCCEE
Confidence 999988776665555543 567887775 46675 67778899999987765211 0001111 122344
Q ss_pred EEEeccccceeeE-EecCCcEEEE
Q 047869 2014 SLYFSSTYKLLFL-SFQDGTTLVG 2036 (2233)
Q Consensus 2014 SVyYS~tl~LLF~-SY~~G~Sf~a 2036 (2233)
+|.+++.-+.+|+ ...+|+..+-
T Consensus 186 ~v~~s~~~~~~~~s~~~dg~v~~w 209 (357)
T 4g56_B 186 CVAACPGKDTIFLSCGEDGRILLW 209 (357)
T ss_dssp EEEECTTCSSCEEEEETTSCEEEC
T ss_pred EEEEccCCCceeeeeccCCceEEE
Confidence 5777777654444 4456665553
No 39
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.40 E-value=0.12 Score=57.20 Aligned_cols=201 Identities=12% Similarity=0.081 Sum_probs=117.3
Q ss_pred ceEEEe-eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccC---cc---ceEEeeccc-ceEEEE
Q 047869 1820 GRLAVG-EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSI---VE---NYLTVAGYE-DCQVLT 1891 (2233)
Q Consensus 1820 GrLAVa-EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~---nE---dyLAVcGLk-DC~VLT 1891 (2233)
+.+|.+ ..+.|.|+++...-.... . .-+..+. .-.-.|..++|+|. ++ ++||++|.. .+.|..
T Consensus 27 ~~l~s~~~dg~i~iw~~~~~~~~~~-----~--~~~~~~~--~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~ 97 (397)
T 1sq9_A 27 SFTVSCSGDGYLKVWDNKLLDNENP-----K--DKSYSHF--VHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYR 97 (397)
T ss_dssp SEEEEEETTSEEEEEESBCCTTCCG-----G--GGEEEEE--CCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEE
T ss_pred CeEEEEcCCCEEEEEECCCcccccC-----C--CcceEEe--cCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEE
Confidence 666665 778999999843211000 0 0011111 22345889999986 36 788887763 566776
Q ss_pred ecCCCceeeeeeeeeccC-----CceEEEeEEe----cCCCceEEEEec-CeEEEEeCcC------CC---CCCcEEEEc
Q 047869 1892 LNPRGEVTDRLAIELALQ-----GAYIRRVDWV----PGSPVQLMVVTN-KFVKIYDLSQ------DN---ISPLHYFTL 1952 (2233)
Q Consensus 1892 fss~GeV~DRL~LeL~Le-----g~fIIKa~WL----PGSQt~LAVVT~-~FVKIYDLS~------D~---lSPvyyF~L 1952 (2233)
+.........+.-.+... ...|..+.|- |..+..|++.+. ..|+|||+.. .. ..|...|..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 177 (397)
T 1sq9_A 98 ITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQG 177 (397)
T ss_dssp EEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEE
T ss_pred ccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeee
Confidence 654332111101111111 4779999999 877664666555 5899999987 22 334435532
Q ss_pred -------CCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecc--cccccCCeEEEEeccccce
Q 047869 1953 -------PDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFN--DREIHAKGLSLYFSSTYKL 2023 (2233)
Q Consensus 1953 -------psGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~--~~q~~~~GVSVyYS~tl~L 2023 (2233)
..+.|..+.| .++| .+++.+.+|.|+.-++.... ....++.. .....+.-.++.|+++-++
T Consensus 178 ~~~~~~~~~~~i~~~~~--~~~~--~l~~~~~dg~i~i~d~~~~~------~~~~~~~~~~h~~~~~~i~~i~~~~~~~~ 247 (397)
T 1sq9_A 178 TVESPMTPSQFATSVDI--SERG--LIATGFNNGTVQISELSTLR------PLYNFESQHSMINNSNSIRSVKFSPQGSL 247 (397)
T ss_dssp EECCSSSSCCCCCEEEE--CTTS--EEEEECTTSEEEEEETTTTE------EEEEEECCC---CCCCCEEEEEECSSTTE
T ss_pred eeccccCCCCCceEEEE--CCCc--eEEEEeCCCcEEEEECCCCc------eeEEEeccccccccCCccceEEECCCCCE
Confidence 4666777664 3566 88888999999998886311 11111110 0001344567899999999
Q ss_pred eeEEecC---CcEEEEEcC
Q 047869 2024 LFLSFQD---GTTLVGRLS 2039 (2233)
Q Consensus 2024 LF~SY~~---G~Sf~a~Ls 2039 (2233)
|+.+..+ |+..+-.+.
T Consensus 248 l~~~~~d~~~g~i~i~d~~ 266 (397)
T 1sq9_A 248 LAIAHDSNSFGCITLYETE 266 (397)
T ss_dssp EEEEEEETTEEEEEEEETT
T ss_pred EEEEecCCCCceEEEEECC
Confidence 9999888 777776664
No 40
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.36 E-value=0.13 Score=58.29 Aligned_cols=274 Identities=11% Similarity=0.043 Sum_probs=150.7
Q ss_pred eecccCceEEEeeCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeeccc-ceEEEEe
Q 047869 1814 LSVSSRGRLAVGEGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYE-DCQVLTL 1892 (2233)
Q Consensus 1814 LSas~rGrLAVaEgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLk-DC~VLTf 1892 (2233)
++-+....++++..+.|.|+++..- +....... .-.-.|.+++|+| ++++||+++.. .+.|..+
T Consensus 99 ~~~s~~~l~~~~~d~~v~lw~~~~~-----------~~~~~~~~---~~~~~v~~v~~s~-~~~~l~~~~~dg~i~iwd~ 163 (401)
T 4aez_A 99 LDWSNLNVVAVALERNVYVWNADSG-----------SVSALAET---DESTYVASVKWSH-DGSFLSVGLGNGLVDIYDV 163 (401)
T ss_dssp EEECTTSEEEEEETTEEEEEETTTC-----------CEEEEEEC---CTTCCEEEEEECT-TSSEEEEEETTSCEEEEET
T ss_pred EeecCCCEEEEECCCeEEEeeCCCC-----------cEeEeeec---CCCCCEEEEEECC-CCCEEEEECCCCeEEEEEC
Confidence 4555666777889999999998421 10111111 1234588999999 77888877643 3445544
Q ss_pred cCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEecCCcEE
Q 047869 1893 NPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQDNISPLHYFTLPDDMIVDATLVIASRGKMF 1971 (2233)
Q Consensus 1893 ss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ 1971 (2233)
. .|+....+ .-...-|..+.|-+ ..|+..+.+ .|+|||+.... .+...+.-..+.|...+|- ++|. +
T Consensus 164 ~-~~~~~~~~----~~~~~~v~~~~~~~---~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~v~~~~~~--~~~~-~ 231 (401)
T 4aez_A 164 E-SQTKLRTM----AGHQARVGCLSWNR---HVLSSGSRSGAIHHHDVRIAN-HQIGTLQGHSSEVCGLAWR--SDGL-Q 231 (401)
T ss_dssp T-TCCEEEEE----CCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSS-CEEEEEECCSSCEEEEEEC--TTSS-E
T ss_pred c-CCeEEEEe----cCCCCceEEEEECC---CEEEEEcCCCCEEEEecccCc-ceeeEEcCCCCCeeEEEEc--CCCC-E
Confidence 3 33333222 22356788899932 356666555 99999998543 4566677778888887754 4564 6
Q ss_pred EEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccceeeEEe---cCCcEEEEEcCCCcccccce
Q 047869 1972 LIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSF---QDGTTLVGRLSPNAASLSEV 2048 (2233)
Q Consensus 1972 ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY---~~G~Sf~a~Ls~~~~sv~ei 2048 (2233)
+++.+.+|.|+.-++..... ...... ..+.-.++.+++.-+.++++- .+|+..+-.+.... .
T Consensus 232 l~s~~~d~~v~iwd~~~~~~--------~~~~~~--~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~-----~ 296 (401)
T 4aez_A 232 LASGGNDNVVQIWDARSSIP--------KFTKTN--HNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGA-----R 296 (401)
T ss_dssp EEEEETTSCEEEEETTCSSE--------EEEECC--CSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCC-----E
T ss_pred EEEEeCCCeEEEccCCCCCc--------cEEecC--CcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCC-----E
Confidence 77888999999988873110 001111 122234678888766666655 47777776654321 1
Q ss_pred eEEEEccCCCCCCCcccceeeccCCCceEEEEeccCCCceEEEEecCCcee-eeccccccCCCCCeEEEEEeecCCCCCe
Q 047869 2049 SYVFEEQDGKLRSAGLHRWKELLASSGLFFCFSSLKSNAAVAVSLGTNELI-AQNMRHAAGSTSPLVGVTAYKPLSKDKV 2127 (2233)
Q Consensus 2049 s~Vfe~~~gk~~~a~L~qWsEV~~hPGLf~cls~~~sn~pvvv~l~pd~I~-iQeiK~~~~sSs~vdgva~y~p~s~~rt 2127 (2233)
...+.. + .. -.-..|+ +.++-++++ +....+..-+..+...... ...++ +....+..++. +.+..
T Consensus 297 ~~~~~~--~-~~-v~~~~~s--~~~~~l~~~-~g~~dg~i~v~~~~~~~~~~~~~~~---~h~~~v~~~~~----s~dg~ 362 (401)
T 4aez_A 297 VNTVDA--G-SQ-VTSLIWS--PHSKEIMST-HGFPDNNLSIWSYSSSGLTKQVDIP---AHDTRVLYSAL----SPDGR 362 (401)
T ss_dssp EEEEEC--S-SC-EEEEEEC--SSSSEEEEE-ECTTTCEEEEEEEETTEEEEEEEEE---CCSSCCCEEEE----CTTSS
T ss_pred EEEEeC--C-Cc-EEEEEEC--CCCCeEEEE-eecCCCcEEEEecCCccceeEEEec---CCCCCEEEEEE----CCCCC
Confidence 111111 0 00 0011222 122333333 2223444444444433221 11221 12333444444 33556
Q ss_pred EEEEEeeCCceeEEec
Q 047869 2128 HCLVLHDDGSLQIYSH 2143 (2233)
Q Consensus 2128 tlLLLcEDGSLrIYsa 2143 (2233)
.++.-..||.+++|..
T Consensus 363 ~l~s~~~dg~i~iw~~ 378 (401)
T 4aez_A 363 ILSTAASDENLKFWRV 378 (401)
T ss_dssp EEEEECTTSEEEEEEC
T ss_pred EEEEEeCCCcEEEEEC
Confidence 7778889999999984
No 41
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.36 E-value=0.092 Score=59.78 Aligned_cols=157 Identities=14% Similarity=0.145 Sum_probs=94.2
Q ss_pred EEEEeecccCccceEEeecccceEEEEecC-CCceeeeeeeeeccCCceEEEeEEecCCCceEEEEec-CeEEEEeCcCC
Q 047869 1865 EIVHLAFNSIVENYLTVAGYEDCQVLTLNP-RGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTN-KFVKIYDLSQD 1942 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGLkDC~VLTfss-~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~-~FVKIYDLS~D 1942 (2233)
.|.+++|+| ++++||.++. |-.|.-++- +|+... .+.-....|..+.|-|..+. |+.... ..|+|||+...
T Consensus 125 ~v~~v~~s~-dg~~l~s~~~-d~~i~iwd~~~~~~~~----~~~~h~~~v~~~~~~p~~~~-l~s~s~d~~v~iwd~~~~ 197 (393)
T 1erj_A 125 YIRSVCFSP-DGKFLATGAE-DRLIRIWDIENRKIVM----ILQGHEQDIYSLDYFPSGDK-LVSGSGDRTVRIWDLRTG 197 (393)
T ss_dssp BEEEEEECT-TSSEEEEEET-TSCEEEEETTTTEEEE----EECCCSSCEEEEEECTTSSE-EEEEETTSEEEEEETTTT
T ss_pred eEEEEEECC-CCCEEEEEcC-CCeEEEEECCCCcEEE----EEccCCCCEEEEEEcCCCCE-EEEecCCCcEEEEECCCC
Confidence 488999999 7788887764 434444432 233221 12222556899999998865 554444 48999999764
Q ss_pred CCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeeccc---ccccCCeEEEEecc
Q 047869 1943 NISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFND---REIHAKGLSLYFSS 2019 (2233)
Q Consensus 1943 ~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~---~q~~~~GVSVyYS~ 2019 (2233)
. ....+.. .+.|..+++. ..+| .+++.-+.+|.|..-++.... ....++.+. ..-.+.-.++-|++
T Consensus 198 ~--~~~~~~~-~~~v~~~~~~-~~~~-~~l~~~s~d~~v~iwd~~~~~------~~~~~~~~~~~~~~h~~~v~~v~~~~ 266 (393)
T 1erj_A 198 Q--CSLTLSI-EDGVTTVAVS-PGDG-KYIAAGSLDRAVRVWDSETGF------LVERLDSENESGTGHKDSVYSVVFTR 266 (393)
T ss_dssp E--EEEEEEC-SSCEEEEEEC-STTC-CEEEEEETTSCEEEEETTTCC------EEEEEC------CCCSSCEEEEEECT
T ss_pred e--eEEEEEc-CCCcEEEEEE-CCCC-CEEEEEcCCCcEEEEECCCCc------EEEeecccccCCCCCCCCEEEEEECC
Confidence 3 3334443 3456655533 2255 467788899999887765211 111111110 00123345788999
Q ss_pred ccceeeEEecCCcEEEEEcC
Q 047869 2020 TYKLLFLSFQDGTTLVGRLS 2039 (2233)
Q Consensus 2020 tl~LLF~SY~~G~Sf~a~Ls 2039 (2233)
+-++|+..-.+|+..+-.+.
T Consensus 267 ~g~~l~s~s~d~~v~~wd~~ 286 (393)
T 1erj_A 267 DGQSVVSGSLDRSVKLWNLQ 286 (393)
T ss_dssp TSSEEEEEETTSEEEEEEC-
T ss_pred CCCEEEEEeCCCEEEEEECC
Confidence 88888888888887776654
No 42
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.36 E-value=0.15 Score=59.49 Aligned_cols=200 Identities=13% Similarity=0.038 Sum_probs=122.6
Q ss_pred eeccc-CceEEEeeCCeEEEEechhhhcccccCCccccccccccccccccceE-EEEeecccC-ccceEEeeccc-ceEE
Q 047869 1814 LSVSS-RGRLAVGEGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFE-IVHLAFNSI-VENYLTVAGYE-DCQV 1889 (2233)
Q Consensus 1814 LSas~-rGrLAVaEgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFe-VlsLafNP~-nEdyLAVcGLk-DC~V 1889 (2233)
++.+. +..+|++.++.|.|+++..- . .+ ......+. .-.-. |..++|+|. ++++||+++.. .+.|
T Consensus 24 ~~~spdg~~l~~~~~~~v~v~~~~~~----~-~~-~~~~~~~~-----~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~v 92 (615)
T 1pgu_A 24 LSYDPTTNAIAYPCGKSAFVRCLDDG----D-SK-VPPVVQFT-----GHGSSVVTTVKFSPIKGSQYLCSGDESGKVIV 92 (615)
T ss_dssp CEEETTTTEEEEEETTEEEEEECCSS----C-CS-SCSEEEEC-----TTTTSCEEEEEECSSTTCCEEEEEETTSEEEE
T ss_pred EEECCCCCEEEEecCCeEEEEECCCC----C-Cc-cccceEEe-----cCCCceEEEEEECcCCCCCEEEEecCCCEEEE
Confidence 34444 44688888899999997521 0 00 00111111 11234 889999996 77888888764 3455
Q ss_pred EEecCC---CceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-----eEEEEeCcCCCCCCcEEEEcCCCCeeEEE
Q 047869 1890 LTLNPR---GEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-----FVKIYDLSQDNISPLHYFTLPDDMIVDAT 1961 (2233)
Q Consensus 1890 LTfss~---GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-----FVKIYDLS~D~lSPvyyF~LpsGkIrDaT 1961 (2233)
..+... +....++.-.+.....-|..+.|-|..+. |++++.+ .|.+||. -.+...+.-..+.|..++
T Consensus 93 w~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~~~~~~~~~~~~v~~~d~----~~~~~~~~~~~~~v~~~~ 167 (615)
T 1pgu_A 93 WGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRR-LCVVGEGRDNFGVFISWDS----GNSLGEVSGHSQRINACH 167 (615)
T ss_dssp EEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSE-EEEEECCSSCSEEEEETTT----CCEEEECCSCSSCEEEEE
T ss_pred EeCCCCcccccccccccchhhcccccEEEEEEeCCCCE-EEEeccCCCCccEEEEEEC----CCcceeeecCCccEEEEE
Confidence 555321 11111222233333566999999999865 6666665 7888872 346677777778888877
Q ss_pred EEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeeccccccc-CCeEEEEeccc-cceeeEEecCCcEEEEEcC
Q 047869 1962 LVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIH-AKGLSLYFSST-YKLLFLSFQDGTTLVGRLS 2039 (2233)
Q Consensus 1962 fv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~-~~GVSVyYS~t-l~LLF~SY~~G~Sf~a~Ls 2039 (2233)
| .++|...++..+.+|.++.-++.... ... ........ ..-.++.|+++ -++|+....+|+..+-.+.
T Consensus 168 ~--~~~~~~~l~~~~~d~~v~vwd~~~~~------~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~ 237 (615)
T 1pgu_A 168 L--KQSRPMRSMTVGDDGSVVFYQGPPFK------FSA--SDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGK 237 (615)
T ss_dssp E--CSSSSCEEEEEETTTEEEEEETTTBE------EEE--EECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETT
T ss_pred E--CCCCCcEEEEEeCCCcEEEEeCCCcc------eee--eecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECC
Confidence 5 46677688889999999987754211 111 11111001 13457899999 8889888889988887664
No 43
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.34 E-value=0.064 Score=62.61 Aligned_cols=197 Identities=14% Similarity=0.137 Sum_probs=121.4
Q ss_pred cCceEEEe-eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecccc---eEEEEec
Q 047869 1818 SRGRLAVG-EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYED---CQVLTLN 1893 (2233)
Q Consensus 1818 ~rGrLAVa-EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLkD---C~VLTfs 1893 (2233)
.+..||.+ +.+.|.|+++..--..... ...-+..+. .-+-.|..++|+| ++++||++|... ..|..++
T Consensus 77 ~~~~l~s~~~dg~v~vw~~~~~~~~~~~-----~~~~~~~~~--~~~~~v~~~~~s~-~~~~l~~~~~~~~~~~~v~~~d 148 (615)
T 1pgu_A 77 GSQYLCSGDESGKVIVWGWTFDKESNSV-----EVNVKSEFQ--VLAGPISDISWDF-EGRRLCVVGEGRDNFGVFISWD 148 (615)
T ss_dssp TCCEEEEEETTSEEEEEEEEEEGGGTEE-----EEEEEEEEE--CCSSCEEEEEECT-TSSEEEEEECCSSCSEEEEETT
T ss_pred CCCEEEEecCCCEEEEEeCCCCcccccc-----cccccchhh--cccccEEEEEEeC-CCCEEEEeccCCCCccEEEEEE
Confidence 44567765 6779999998422100000 000011111 1234588999998 678999998764 7888887
Q ss_pred CCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeCcCCCCCCcEEEEcCCC---CeeEEEEEEecC-C
Q 047869 1894 PRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQDNISPLHYFTLPDD---MIVDATLVIASR-G 1968 (2233)
Q Consensus 1894 s~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D~lSPvyyF~LpsG---kIrDaTfv~~e~-G 1968 (2233)
.|.... .+.-....|..+.|-|..+..++..+.+ .|+|||+.. ..+...+.-..+ .|..++| .++ |
T Consensus 149 -~~~~~~----~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~--~~~~~~~~~~~~~~~~v~~~~~--~~~~~ 219 (615)
T 1pgu_A 149 -SGNSLG----EVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPP--FKFSASDRTHHKQGSFVRDVEF--SPDSG 219 (615)
T ss_dssp -TCCEEE----ECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTT--BEEEEEECSSSCTTCCEEEEEE--CSTTC
T ss_pred -CCCcce----eeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCC--cceeeeecccCCCCceEEEEEE--CCCCC
Confidence 343222 2223366799999999998777776665 999999754 335556665666 7777765 355 5
Q ss_pred cEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccceeeEEecCCcEEEEEcC
Q 047869 1969 KMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSFQDGTTLVGRLS 2039 (2233)
Q Consensus 1969 ~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY~~G~Sf~a~Ls 2039 (2233)
.++++.+.+|.|+.-++..... + ..+..+.....+.-.++.|+ .-++|+..-.+|+..+-.+.
T Consensus 220 -~~l~~~~~dg~i~vwd~~~~~~-----~-~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~ 282 (615)
T 1pgu_A 220 -EFVITVGSDRKISCFDGKSGEF-----L-KYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVT 282 (615)
T ss_dssp -CEEEEEETTCCEEEEETTTCCE-----E-EECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETT
T ss_pred -CEEEEEeCCCeEEEEECCCCCE-----e-EEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECC
Confidence 4777888999999888752210 0 11100000123335567888 77888888888887776654
No 44
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=97.29 E-value=0.44 Score=55.05 Aligned_cols=161 Identities=13% Similarity=-0.000 Sum_probs=102.8
Q ss_pred EEEEeecccCccceEEeecccc--eEEEEecC-CCceeeeeeeeeccCCceEEEeEEecCCCceEEEEec-CeEEEEeCc
Q 047869 1865 EIVHLAFNSIVENYLTVAGYED--CQVLTLNP-RGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTN-KFVKIYDLS 1940 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGLkD--C~VLTfss-~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~-~FVKIYDLS 1940 (2233)
.|.+++|+| ++++|+++|-.| +.|..+.. .|.....+.-+ -.+..|..+.|-|..+. |++.+. ..|++||+.
T Consensus 104 ~v~~~~~s~-d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~-l~~~~~~g~v~~~~~~ 179 (450)
T 2vdu_B 104 YIRNLRLTS-DESRLIACADSDKSLLVFDVDKTSKNVLKLRKRF--CFSKRPNAISIAEDDTT-VIIADKFGDVYSIDIN 179 (450)
T ss_dssp CEEEEEECT-TSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEE--ECSSCEEEEEECTTSSE-EEEEETTSEEEEEETT
T ss_pred ceEEEEEcC-CCCEEEEEECCCCeEEEEECcCCCCceeeeeecc--cCCCCceEEEEcCCCCE-EEEEeCCCcEEEEecC
Confidence 589999999 577775555444 45555542 45444333221 12467899999998765 555544 479999997
Q ss_pred CCCCC--CcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEec
Q 047869 1941 QDNIS--PLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFS 2018 (2233)
Q Consensus 1941 ~D~lS--PvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS 2018 (2233)
..... +...+.-..+.|.+++|-.+.++..+++..+.+|.|+.-++..... +... ..+ -.+.-.++.++
T Consensus 180 ~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~-----~~~~---~~~-h~~~v~~~~~s 250 (450)
T 2vdu_B 180 SIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFI-----VDKW---LFG-HKHFVSSICCG 250 (450)
T ss_dssp SCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTC-----EEEE---CCC-CSSCEEEEEEC
T ss_pred CcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCce-----eeee---ecC-CCCceEEEEEC
Confidence 76654 4445555678899888765423456888889999999888763211 0000 000 12334567788
Q ss_pred cccceeeEEecCCcEEEEEcC
Q 047869 2019 STYKLLFLSFQDGTTLVGRLS 2039 (2233)
Q Consensus 2019 ~tl~LLF~SY~~G~Sf~a~Ls 2039 (2233)
+-++|+..-.+|+..+-.+.
T Consensus 251 -d~~~l~s~~~d~~v~vwd~~ 270 (450)
T 2vdu_B 251 -KDYLLLSAGGDDKIFAWDWK 270 (450)
T ss_dssp -STTEEEEEESSSEEEEEETT
T ss_pred -CCCEEEEEeCCCeEEEEECC
Confidence 77888888888887776664
No 45
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.29 E-value=0.11 Score=57.08 Aligned_cols=154 Identities=11% Similarity=0.129 Sum_probs=99.2
Q ss_pred EEEEeecccCccceEEeecccceEEEEecCC-CceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeCcCC
Q 047869 1865 EIVHLAFNSIVENYLTVAGYEDCQVLTLNPR-GEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQD 1942 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGLkDC~VLTfss~-GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D 1942 (2233)
.|.+|+|+| ++++||.+|. |-.|.-++-. |.... .+......|..+.|.|..+. |+....+ .|+|||+...
T Consensus 15 ~V~~~~fsp-~~~~l~s~~~-dg~v~lWd~~~~~~~~----~~~~~~~~v~~~~~~~~~~~-l~s~s~d~~i~vwd~~~~ 87 (304)
T 2ynn_A 15 RVKGIDFHP-TEPWVLTTLY-SGRVELWNYETQVEVR----SIQVTETPVRAGKFIARKNW-IIVGSDDFRIRVFNYNTG 87 (304)
T ss_dssp CEEEEEECS-SSSEEEEEET-TSEEEEEETTTTEEEE----EEECCSSCEEEEEEEGGGTE-EEEEETTSEEEEEETTTC
T ss_pred ceEEEEECC-CCCEEEEEcC-CCcEEEEECCCCceeE----EeeccCCcEEEEEEeCCCCE-EEEECCCCEEEEEECCCC
Confidence 488999999 6788887774 4555555443 32222 22333567899999998765 5555555 8999999765
Q ss_pred CCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEecc-cc
Q 047869 1943 NISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSS-TY 2021 (2233)
Q Consensus 1943 ~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~-tl 2021 (2233)
.+...|.--.+.|.+++|- ++|. +++.-|.+|.|..-++..... +.... .. -.+.-.++-|++ .-
T Consensus 88 --~~~~~~~~h~~~v~~~~~~--~~~~-~l~sgs~D~~v~lWd~~~~~~-----~~~~~--~~--h~~~v~~v~~~p~~~ 153 (304)
T 2ynn_A 88 --EKVVDFEAHPDYIRSIAVH--PTKP-YVLSGSDDLTVKLWNWENNWA-----LEQTF--EG--HEHFVMCVAFNPKDP 153 (304)
T ss_dssp --CEEEEEECCSSCEEEEEEC--SSSS-EEEEEETTSCEEEEEGGGTTE-----EEEEE--CC--CCSCEEEEEECTTCT
T ss_pred --cEEEEEeCCCCcEEEEEEc--CCCC-EEEEECCCCeEEEEECCCCcc-----hhhhh--cc--cCCcEEEEEECCCCC
Confidence 3567777778889888754 5564 677889999999887763210 11111 11 122345677887 45
Q ss_pred ceeeEEecCCcEEEEEcC
Q 047869 2022 KLLFLSFQDGTTLVGRLS 2039 (2233)
Q Consensus 2022 ~LLF~SY~~G~Sf~a~Ls 2039 (2233)
++|...-.+|+..+=.+.
T Consensus 154 ~~l~sgs~D~~v~iwd~~ 171 (304)
T 2ynn_A 154 STFASGCLDRTVKVWSLG 171 (304)
T ss_dssp TEEEEEETTSEEEEEETT
T ss_pred CEEEEEeCCCeEEEEECC
Confidence 666666777877766553
No 46
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.27 E-value=0.084 Score=58.34 Aligned_cols=170 Identities=11% Similarity=0.043 Sum_probs=100.6
Q ss_pred EEEEeecccCccceEEeeccc-ceEEEEecCCCceeee--eeeeeccCCceEEEeEEecC----C--CceEEEEec-CeE
Q 047869 1865 EIVHLAFNSIVENYLTVAGYE-DCQVLTLNPRGEVTDR--LAIELALQGAYIRRVDWVPG----S--PVQLMVVTN-KFV 1934 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGLk-DC~VLTfss~GeV~DR--L~LeL~Leg~fIIKa~WLPG----S--Qt~LAVVT~-~FV 1934 (2233)
.|..|+|+| ++||++|.. .+.|..+..... ... ....+.-....|..+.|.|. . ...|+.... ..|
T Consensus 18 ~i~~~~~~~---~~l~s~~~dg~i~iw~~~~~~~-~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i 93 (397)
T 1sq9_A 18 DIFSVSACN---SFTVSCSGDGYLKVWDNKLLDN-ENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDL 93 (397)
T ss_dssp CEEEEEECS---SEEEEEETTSEEEEEESBCCTT-CCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCE
T ss_pred CeEEEEecC---CeEEEEcCCCEEEEEECCCccc-ccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCE
Confidence 577899988 788888764 444555533321 111 11122223566999999998 4 034565554 489
Q ss_pred EEEeCcCCCCCC---cEEEEcC-----CCCeeEEEEEEe--cCCcEEEEEEecCCceEEEEeccc-----CCCcccccee
Q 047869 1935 KIYDLSQDNISP---LHYFTLP-----DDMIVDATLVIA--SRGKMFLIVLSECGSLYRLELSVE-----GNVGATPLKE 1999 (2233)
Q Consensus 1935 KIYDLS~D~lSP---vyyF~Lp-----sGkIrDaTfv~~--e~G~~~ILVLSS~G~LY~Qels~s-----~d~g~~~ltE 1999 (2233)
+|||+....... ...+... .+.|..++|-.. ++|...+++.+.+|.|+.-++... +..-.+....
T Consensus 94 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 173 (397)
T 1sq9_A 94 LFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTL 173 (397)
T ss_dssp EEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEE
T ss_pred EEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcc
Confidence 999998776432 3344434 377888886522 456554888899999999888751 1110000000
Q ss_pred eee----cccccccCCeEEEEeccccceeeEEecCCcEEEEEcCC
Q 047869 2000 IIQ----FNDREIHAKGLSLYFSSTYKLLFLSFQDGTTLVGRLSP 2040 (2233)
Q Consensus 2000 vvq----~~~~q~~~~GVSVyYS~tl~LLF~SY~~G~Sf~a~Ls~ 2040 (2233)
.++ .+ ......-.++.++++- +|+....+|+..+-.+..
T Consensus 174 ~~~~~~~~~-~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~ 216 (397)
T 1sq9_A 174 ELQGTVESP-MTPSQFATSVDISERG-LIATGFNNGTVQISELST 216 (397)
T ss_dssp EEEEEECCS-SSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTT
T ss_pred eeeeeeccc-cCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCC
Confidence 111 00 1113345678888888 888888899888877643
No 47
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.27 E-value=0.078 Score=59.82 Aligned_cols=166 Identities=12% Similarity=0.127 Sum_probs=110.7
Q ss_pred eEEEEeecccCccceEEe-ecccceEEEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeCcC
Q 047869 1864 FEIVHLAFNSIVENYLTV-AGYEDCQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQ 1941 (2233)
Q Consensus 1864 FeVlsLafNP~nEdyLAV-cGLkDC~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~ 1941 (2233)
++.--+++||....+++. .+=..+.|..++..|.+...+. .+.-...-|..+.|-|.....||....+ .|+|||+..
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~-~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~ 113 (402)
T 2aq5_A 35 WDSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVP-LVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPD 113 (402)
T ss_dssp CSSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCC-CBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCT
T ss_pred cCCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCc-eEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccC
Confidence 333346776654444443 3345677777777765532211 1111256799999999445567777766 799999998
Q ss_pred CCC-----CCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEE
Q 047869 1942 DNI-----SPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLY 2016 (2233)
Q Consensus 1942 D~l-----SPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVy 2016 (2233)
... .|...+.-..+.|..++|- ++|..+++..+.+|.|+.-++.... ....+......+.-.++.
T Consensus 114 ~~~~~~~~~~~~~~~~h~~~v~~~~~~--p~~~~~l~s~~~dg~i~iwd~~~~~--------~~~~~~~~~~~~~v~~~~ 183 (402)
T 2aq5_A 114 GGLVLPLREPVITLEGHTKRVGIVAWH--PTAQNVLLSAGCDNVILVWDVGTGA--------AVLTLGPDVHPDTIYSVD 183 (402)
T ss_dssp TCCSSCBCSCSEEEECCSSCEEEEEEC--SSBTTEEEEEETTSCEEEEETTTTE--------EEEEECTTTCCSCEEEEE
T ss_pred CCCccccCCceEEecCCCCeEEEEEEC--cCCCCEEEEEcCCCEEEEEECCCCC--------ccEEEecCCCCCceEEEE
Confidence 765 6888888888889888754 5665688888999999988876321 111111011133456789
Q ss_pred eccccceeeEEecCCcEEEEEcCC
Q 047869 2017 FSSTYKLLFLSFQDGTTLVGRLSP 2040 (2233)
Q Consensus 2017 YS~tl~LLF~SY~~G~Sf~a~Ls~ 2040 (2233)
++++-++|+.+..+|+..+-.+..
T Consensus 184 ~~~~~~~l~~~~~d~~i~iwd~~~ 207 (402)
T 2aq5_A 184 WSRDGALICTSCRDKRVRVIEPRK 207 (402)
T ss_dssp ECTTSSCEEEEETTSEEEEEETTT
T ss_pred ECCCCCEEEEEecCCcEEEEeCCC
Confidence 999999999999999988877643
No 48
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.26 E-value=0.38 Score=53.74 Aligned_cols=190 Identities=13% Similarity=0.234 Sum_probs=120.1
Q ss_pred cCceEEEe-eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeeccc-ceEEEEecCC
Q 047869 1818 SRGRLAVG-EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYE-DCQVLTLNPR 1895 (2233)
Q Consensus 1818 ~rGrLAVa-EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLk-DC~VLTfss~ 1895 (2233)
.+.++|++ ..+.|.|+++..-- .... + ..-.-.|..++|+| ++++||.++.. .+.|..+. +
T Consensus 108 ~~~~l~~~~~dg~i~iwd~~~~~-----------~~~~--~--~~h~~~v~~~~~~~-~~~~l~s~s~d~~i~iwd~~-~ 170 (420)
T 3vl1_A 108 QMRRFILGTTEGDIKVLDSNFNL-----------QREI--D--QAHVSEITKLKFFP-SGEALISSSQDMQLKIWSVK-D 170 (420)
T ss_dssp SSCEEEEEETTSCEEEECTTSCE-----------EEEE--T--TSSSSCEEEEEECT-TSSEEEEEETTSEEEEEETT-T
T ss_pred CCCEEEEEECCCCEEEEeCCCcc-----------eeee--c--ccccCccEEEEECC-CCCEEEEEeCCCeEEEEeCC-C
Confidence 34567765 77789999874210 0100 0 12234688999999 56788877763 35555553 3
Q ss_pred CceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeCcCCCCCCcEEEEc---CCCCeeEEEEEEe------
Q 047869 1896 GEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQDNISPLHYFTL---PDDMIVDATLVIA------ 1965 (2233)
Q Consensus 1896 GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D~lSPvyyF~L---psGkIrDaTfv~~------ 1965 (2233)
|+....+ .-....|..+.|-|..+. |+..+.+ .|+|||+... .+...|.. +.+.|...++...
T Consensus 171 ~~~~~~~----~~h~~~v~~~~~~~~~~~-l~s~~~d~~v~iwd~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 243 (420)
T 3vl1_A 171 GSNPRTL----IGHRATVTDIAIIDRGRN-VLSASLDGTIRLWECGTG--TTIHTFNRKENPHDGVNSIALFVGTDRQLH 243 (420)
T ss_dssp CCCCEEE----ECCSSCEEEEEEETTTTE-EEEEETTSCEEEEETTTT--EEEEEECBTTBTTCCEEEEEEEECCCSSCG
T ss_pred CcCceEE----cCCCCcEEEEEEcCCCCE-EEEEcCCCcEEEeECCCC--ceeEEeecCCCCCCCccEEEEecCCcceee
Confidence 3332222 223567999999998654 5555554 7999999754 35566654 4556777766532
Q ss_pred -------------cCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccc-eeeEEecCC
Q 047869 1966 -------------SRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYK-LLFLSFQDG 2031 (2233)
Q Consensus 1966 -------------e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~-LLF~SY~~G 2031 (2233)
++| .++++-+.+|.|+.-++.... ....... ...+.-.++.+++.-+ +|+.+..+|
T Consensus 244 ~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~i~d~~~~~--------~~~~~~~-~~~~~v~~~~~~~~~~~~l~~g~~dg 313 (420)
T 3vl1_A 244 EISTSKKNNLEFGTYG-KYVIAGHVSGVITVHNVFSKE--------QTIQLPS-KFTCSCNSLTVDGNNANYIYAGYENG 313 (420)
T ss_dssp GGCCCCCCTTCSSCTT-EEEEEEETTSCEEEEETTTCC--------EEEEECC-TTSSCEEEEEECSSCTTEEEEEETTS
T ss_pred ecccCcccceEEcCCC-CEEEEEcCCCeEEEEECCCCc--------eeEEccc-ccCCCceeEEEeCCCCCEEEEEeCCC
Confidence 345 577888999999988876321 1111111 1234466889999988 999999999
Q ss_pred cEEEEEcCCC
Q 047869 2032 TTLVGRLSPN 2041 (2233)
Q Consensus 2032 ~Sf~a~Ls~~ 2041 (2233)
+..+-.+...
T Consensus 314 ~i~vwd~~~~ 323 (420)
T 3vl1_A 314 MLAQWDLRSP 323 (420)
T ss_dssp EEEEEETTCT
T ss_pred eEEEEEcCCC
Confidence 9888777543
No 49
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.25 E-value=0.39 Score=53.52 Aligned_cols=187 Identities=15% Similarity=0.207 Sum_probs=114.2
Q ss_pred CceEEEe-eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecccc-eEEEEecCCC
Q 047869 1819 RGRLAVG-EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYED-CQVLTLNPRG 1896 (2233)
Q Consensus 1819 rGrLAVa-EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLkD-C~VLTfss~G 1896 (2233)
+..+|.+ ..++|.|+++..-- ++...+.. .-.|..++|+| ++++||++|... +.|..+....
T Consensus 67 ~~~l~s~s~Dg~v~iWd~~~~~-----------~~~~~~~~----~~~v~~~~~s~-~~~~l~s~~~d~~v~iw~~~~~~ 130 (340)
T 1got_B 67 SRLLLSASQDGKLIIWDSYTTN-----------KVHAIPLR----SSWVMTCAYAP-SGNYVACGGLDNICSIYNLKTRE 130 (340)
T ss_dssp SSEEEEEETTTEEEEEETTTCC-----------EEEEEECS----SSCEEEEEECT-TSSEEEEEETTCEEEEEETTTCS
T ss_pred CCEEEEEeCCCcEEEEECCCCC-----------cceEeecC----CccEEEEEECC-CCCEEEEEeCCCeEEEEECccCC
Confidence 3445554 77889999863211 11111111 12378899999 678888887643 3444443321
Q ss_pred ceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEE
Q 047869 1897 EVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQDNISPLHYFTLPDDMIVDATLVIASRGKMFLIVL 1975 (2233)
Q Consensus 1897 eV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVL 1975 (2233)
. .-+..-++.-....|..+.|.|+.+ ++..+.+ .|+|||+... .+...|.-..+.|..++|- ++|. +++.-
T Consensus 131 ~-~~~~~~~~~~h~~~v~~~~~~~~~~--l~s~s~d~~i~~wd~~~~--~~~~~~~~h~~~v~~~~~~--~~~~-~l~sg 202 (340)
T 1got_B 131 G-NVRVSRELAGHTGYLSCCRFLDDNQ--IVTSSGDTTCALWDIETG--QQTTTFTGHTGDVMSLSLA--PDTR-LFVSG 202 (340)
T ss_dssp B-SCEEEEEEECCSSCEEEEEEEETTE--EEEEETTSCEEEEETTTT--EEEEEECCCSSCEEEEEEC--TTSS-EEEEE
T ss_pred C-cceeEEEecCCCccEEEEEECCCCc--EEEEECCCcEEEEECCCC--cEEEEEcCCCCceEEEEEC--CCCC-EEEEE
Confidence 1 1112222222356789999999874 5555544 8999999754 3556666667788877653 5564 67778
Q ss_pred ecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccceeeEEecCCcEEEEEcC
Q 047869 1976 SECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSFQDGTTLVGRLS 2039 (2233)
Q Consensus 1976 SS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY~~G~Sf~a~Ls 2039 (2233)
+.+|.|..-++..... ...+ .. -.+.-.++.+++.-+.|...-.+|+..+-.+.
T Consensus 203 ~~d~~v~~wd~~~~~~------~~~~--~~--h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~ 256 (340)
T 1got_B 203 ACDASAKLWDVREGMC------RQTF--TG--HESDINAICFFPNGNAFATGSDDATCRLFDLR 256 (340)
T ss_dssp ETTSCEEEEETTTCSE------EEEE--CC--CSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred eCCCcEEEEECCCCee------EEEE--cC--CcCCEEEEEEcCCCCEEEEEcCCCcEEEEECC
Confidence 8899999887763210 0001 11 12334578899988888888888888776664
No 50
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.23 E-value=0.17 Score=55.71 Aligned_cols=206 Identities=17% Similarity=0.221 Sum_probs=119.3
Q ss_pred ceecccCceEEEe-e---CCeEEEEechhhhcccccCCccccccccccccc-cccceEEEEeecccCccceEEeeccc--
Q 047869 1813 LLSVSSRGRLAVG-E---GDKVAIFDVGQLIGQATIQPVTADKTNVKPLSR-NIVRFEIVHLAFNSIVENYLTVAGYE-- 1885 (2233)
Q Consensus 1813 LLSas~rGrLAVa-E---gdKVTILqlsaLLkQad~s~~skdKlTLtrLSs-a~VpFeVlsLafNP~nEdyLAVcGLk-- 1885 (2233)
-++.+..|+|++. + .+.|.++++.. .. .+ ++.. ....-.+..++++| ++++|+|++..
T Consensus 44 ~~a~spdg~l~~~~~~~~~~~v~~~~~~~----g~-----~~-----~~~~~~~~~~~p~~~a~sp-dg~~l~~~~~~~~ 108 (347)
T 3hfq_A 44 YLALSAKDCLYSVDKEDDEGGIAAWQIDG----QT-----AH-----KLNTVVAPGTPPAYVAVDE-ARQLVYSANYHKG 108 (347)
T ss_dssp CEEECTTCEEEEEEEETTEEEEEEEEEET----TE-----EE-----EEEEEEEESCCCSEEEEET-TTTEEEEEETTTT
T ss_pred eEEEccCCeEEEEEecCCCceEEEEEecC----Cc-----EE-----EeeeeecCCCCCEEEEECC-CCCEEEEEeCCCC
Confidence 3566667777654 4 36888888721 00 01 1111 11122344788888 77889998864
Q ss_pred ceEEEEecCCCceeeeeeeeec-------cCCceEEEeEEecCCCceEEEEe--cCeEEEEeCc-CCCCCCcEEEEcCCC
Q 047869 1886 DCQVLTLNPRGEVTDRLAIELA-------LQGAYIRRVDWVPGSPVQLMVVT--NKFVKIYDLS-QDNISPLHYFTLPDD 1955 (2233)
Q Consensus 1886 DC~VLTfss~GeV~DRL~LeL~-------Leg~fIIKa~WLPGSQt~LAVVT--~~FVKIYDLS-~D~lSPvyyF~LpsG 1955 (2233)
.+.|+.++.+|.......+... ..+..+..+.|-|..+ +.++. .+.|.+||+. ...+.+...+..+.|
T Consensus 109 ~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~--l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g 186 (347)
T 3hfq_A 109 TAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR--LAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAG 186 (347)
T ss_dssp EEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC--EEEEETTTTEEEEEEECTTSCEEEEEEEECCTT
T ss_pred EEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc--EEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCC
Confidence 4777888777765432222111 1245688899999887 44443 3479999998 334455556667666
Q ss_pred -CeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeee-cccccc-cCCeEEEEeccccceeeEEec-CC
Q 047869 1956 -MIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQ-FNDREI-HAKGLSLYFSSTYKLLFLSFQ-DG 2031 (2233)
Q Consensus 1956 -kIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq-~~~~q~-~~~GVSVyYS~tl~LLF~SY~-~G 2031 (2233)
..+..+ +.++|+...+.-+..|.++.-++.... +.......+. .+.... ....-.+-+|++-+.||++-. +|
T Consensus 187 ~~p~~~~--~spdg~~l~v~~~~~~~v~v~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~ 262 (347)
T 3hfq_A 187 FGPRHLV--FSPDGQYAFLAGELSSQIASLKYDTQT--GAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYN 262 (347)
T ss_dssp CCEEEEE--ECTTSSEEEEEETTTTEEEEEEEETTT--TEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTT
T ss_pred CCCceEE--ECCCCCEEEEEeCCCCEEEEEEecCCC--CceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCC
Confidence 455543 467887655555667888776665321 2221111111 111101 123456889999999988765 56
Q ss_pred cEEEEEcC
Q 047869 2032 TTLVGRLS 2039 (2233)
Q Consensus 2032 ~Sf~a~Ls 2039 (2233)
+..+-.++
T Consensus 263 ~v~v~~~~ 270 (347)
T 3hfq_A 263 TLAVFAVT 270 (347)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEC
Confidence 65555554
No 51
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.19 E-value=0.07 Score=69.04 Aligned_cols=279 Identities=13% Similarity=0.165 Sum_probs=147.6
Q ss_pred cCceEEEe-eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeeccc-ceEEEEecCC
Q 047869 1818 SRGRLAVG-EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYE-DCQVLTLNPR 1895 (2233)
Q Consensus 1818 ~rGrLAVa-EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLk-DC~VLTfss~ 1895 (2233)
.+.++|.+ ..++|.|+++..--.. .+++ .-.-.|.+++|+| ++++||++|.. .+.|..+. +
T Consensus 626 ~~~~l~s~~~d~~i~vw~~~~~~~~----------~~~~-----~h~~~v~~~~~s~-~~~~l~s~~~d~~v~vwd~~-~ 688 (1249)
T 3sfz_A 626 DGQRIASCGADKTLQVFKAETGEKL----------LDIK-----AHEDEVLCCAFSS-DDSYIATCSADKKVKIWDSA-T 688 (1249)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCEE----------EEEC-----CCSSCEEEEEECT-TSSEEEEEETTSEEEEEETT-T
T ss_pred CCCEEEEEeCCCeEEEEECCCCCEE----------EEec-----cCCCCEEEEEEec-CCCEEEEEeCCCeEEEEECC-C
Confidence 34456654 7788999988432111 1111 1233688999999 67899988753 34444443 3
Q ss_pred CceeeeeeeeeccCCceEEEeEEecCCCce-EEEEecC-eEEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEE
Q 047869 1896 GEVTDRLAIELALQGAYIRRVDWVPGSPVQ-LMVVTNK-FVKIYDLSQDNISPLHYFTLPDDMIVDATLVIASRGKMFLI 1973 (2233)
Q Consensus 1896 GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~-LAVVT~~-FVKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~IL 1973 (2233)
|+.... +.-.+.-|..+.|.|..... ++..+.+ .|+|||+.... +...+.-..+.|..++|- ++|. +++
T Consensus 689 ~~~~~~----~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~--~~~~~~~h~~~v~~~~~s--p~~~-~l~ 759 (1249)
T 3sfz_A 689 GKLVHT----YDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE--CRNTMFGHTNSVNHCRFS--PDDE-LLA 759 (1249)
T ss_dssp CCEEEE----EECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS--EEEEECCCSSCEEEEEEC--SSTT-EEE
T ss_pred CceEEE----EcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc--hhheecCCCCCEEEEEEe--cCCC-EEE
Confidence 433322 22335678999999975544 4444444 89999997653 555666667788887754 5665 677
Q ss_pred EEecCCceEEEEecccCCCccccceee---eecccccccCCeEEEEeccccceeeEEecCCcEEEEEcCCCcccccceeE
Q 047869 1974 VLSECGSLYRLELSVEGNVGATPLKEI---IQFNDREIHAKGLSLYFSSTYKLLFLSFQDGTTLVGRLSPNAASLSEVSY 2050 (2233)
Q Consensus 1974 VLSS~G~LY~Qels~s~d~g~~~ltEv---vq~~~~q~~~~GVSVyYS~tl~LLF~SY~~G~Sf~a~Ls~~~~sv~eis~ 2050 (2233)
..|.+|.|..-++.............. ...+.........++.||++-+.++++. +|..++-.+.... .+..
T Consensus 760 s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~~~v~~~d~~~~~----~~~~ 834 (1249)
T 3sfz_A 760 SCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KNKVLLFDIHTSG----LLAE 834 (1249)
T ss_dssp EEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE-TTEEEEEETTTCC----EEEE
T ss_pred EEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc-CCcEEEEEecCCC----ceeE
Confidence 888999999887763221111111100 0001111122344567888888777776 4555554443221 1111
Q ss_pred EEEccCCCCCCCcccceeeccCCCceEEEEeccCCCceEEEEecCCceeeeccccccCCCCCeEEEEEeecCCCCCeEEE
Q 047869 2051 VFEEQDGKLRSAGLHRWKELLASSGLFFCFSSLKSNAAVAVSLGTNELIAQNMRHAAGSTSPLVGVTAYKPLSKDKVHCL 2130 (2233)
Q Consensus 2051 Vfe~~~gk~~~a~L~qWsEV~~hPGLf~cls~~~sn~pvvv~l~pd~I~iQeiK~~~~sSs~vdgva~y~p~s~~rttlL 2130 (2233)
+. .+....-.-..|+ +.|-+++... ..+..-+.-+.... .++.++ +....+.+++. +.+...++
T Consensus 835 -~~--~~~~~~v~~~~~s----p~~~~l~~~~-~dg~v~vwd~~~~~-~~~~~~---~h~~~v~~v~~----spdg~~l~ 898 (1249)
T 3sfz_A 835 -IH--TGHHSTIQYCDFS----PYDHLAVIAL-SQYCVELWNIDSRL-KVADCR---GHLSWVHGVMF----SPDGSSFL 898 (1249)
T ss_dssp -EE--CSSSSCCCEEEEC----SSTTEEEEEC-SSSCEEEEETTTTE-EEEEEC---CCSSCEEEEEE----CTTSSEEE
T ss_pred -Ec--CCCCCceEEEEEc----CCCCEEEEEe-CCCeEEEEEcCCCc-eeeecC---CCccceEEEEE----CCCCCEEE
Confidence 11 1111111111121 1222222122 23443333333332 222222 23445556655 33555688
Q ss_pred EEeeCCceeEEec
Q 047869 2131 VLHDDGSLQIYSH 2143 (2233)
Q Consensus 2131 LLcEDGSLrIYsa 2143 (2233)
.-..||++++|..
T Consensus 899 s~s~dg~v~vw~~ 911 (1249)
T 3sfz_A 899 TASDDQTIRVWET 911 (1249)
T ss_dssp EEETTSCEEEEEH
T ss_pred EEeCCCeEEEEEc
Confidence 8889999999974
No 52
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.19 E-value=0.045 Score=60.16 Aligned_cols=150 Identities=16% Similarity=0.123 Sum_probs=96.2
Q ss_pred EEEeecccCccceEEeecccceEEEEecCC-CceeeeeeeeeccCCceEEEeEEecCCCceEEEEe-cCeEEEEeCcCCC
Q 047869 1866 IVHLAFNSIVENYLTVAGYEDCQVLTLNPR-GEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVT-NKFVKIYDLSQDN 1943 (2233)
Q Consensus 1866 VlsLafNP~nEdyLAVcGLkDC~VLTfss~-GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT-~~FVKIYDLS~D~ 1943 (2233)
|..+.++|. +.+++++ .+-.|..++.+ |.... .+......|..+.|-|..+ .|++.+ ...|+|||+...
T Consensus 209 ~~~~~~~~~--~~~~~~~-~~g~i~~~d~~~~~~~~----~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~- 279 (425)
T 1r5m_A 209 GVDVEWVDD--DKFVIPG-PKGAIFVYQITEKTPTG----KLIGHHGPISVLEFNDTNK-LLLSASDDGTLRIWHGGNG- 279 (425)
T ss_dssp BSCCEEEET--TEEEEEC-GGGCEEEEETTCSSCSE----EECCCSSCEEEEEEETTTT-EEEEEETTSCEEEECSSSB-
T ss_pred eeEEEEcCC--CEEEEEc-CCCeEEEEEcCCCceee----eeccCCCceEEEEECCCCC-EEEEEcCCCEEEEEECCCC-
Confidence 677888773 3344333 34444444333 22221 2222356789999999887 455555 458999998764
Q ss_pred CCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccce
Q 047869 1944 ISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKL 2023 (2233)
Q Consensus 1944 lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~L 2023 (2233)
.+...+.-..+.|..+++- ++| .++..+.+|.|+.-++.... ....+.. ....-.++.++++-++
T Consensus 280 -~~~~~~~~~~~~i~~~~~~--~~~--~l~~~~~d~~i~i~d~~~~~------~~~~~~~----~~~~i~~~~~s~~~~~ 344 (425)
T 1r5m_A 280 -NSQNCFYGHSQSIVSASWV--GDD--KVISCSMDGSVRLWSLKQNT------LLALSIV----DGVPIFAGRISQDGQK 344 (425)
T ss_dssp -SCSEEECCCSSCEEEEEEE--TTT--EEEEEETTSEEEEEETTTTE------EEEEEEC----TTCCEEEEEECTTSSE
T ss_pred -ccceEecCCCccEEEEEEC--CCC--EEEEEeCCCcEEEEECCCCc------EeEeccc----CCccEEEEEEcCCCCE
Confidence 4666776677788877754 566 88889999999988875211 1111111 1233557889999999
Q ss_pred eeEEecCCcEEEEEcC
Q 047869 2024 LFLSFQDGTTLVGRLS 2039 (2233)
Q Consensus 2024 LF~SY~~G~Sf~a~Ls 2039 (2233)
|+.+..+|+..+-.+.
T Consensus 345 l~~~~~dg~i~i~~~~ 360 (425)
T 1r5m_A 345 YAVAFMDGQVNVYDLK 360 (425)
T ss_dssp EEEEETTSCEEEEECH
T ss_pred EEEEECCCeEEEEECC
Confidence 9999888887776663
No 53
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.18 E-value=0.17 Score=57.28 Aligned_cols=239 Identities=11% Similarity=0.095 Sum_probs=125.6
Q ss_pred EEEeecccCccceEEeecccceEEEEecCCCceeeeeeeeecc--CCceEEEeEEecCCCceEEEEec-CeEEEEeCcCC
Q 047869 1866 IVHLAFNSIVENYLTVAGYEDCQVLTLNPRGEVTDRLAIELAL--QGAYIRRVDWVPGSPVQLMVVTN-KFVKIYDLSQD 1942 (2233)
Q Consensus 1866 VlsLafNP~nEdyLAVcGLkDC~VLTfss~GeV~DRL~LeL~L--eg~fIIKa~WLPGSQt~LAVVT~-~FVKIYDLS~D 1942 (2233)
|..++|+|. +.+|+..+-..+.|.-+..+..+ ....... -...|..+.|-|..+. |+.... ..|+|||+..-
T Consensus 97 V~~~~~s~d-~~~l~~s~dg~v~lWd~~~~~~~---~~~~~~~~~h~~~V~~v~~spdg~~-l~sgs~dg~v~iwd~~~~ 171 (357)
T 4g56_B 97 VTDVAWVSE-KGILVASDSGAVELWEILEKESL---LVNKFAKYEHDDIVKTLSVFSDGTQ-AVSGGKDFSVKVWDLSQK 171 (357)
T ss_dssp EEEEEEETT-TEEEEEETTSCEEEC-----------CCCCEEECCCSSCEEEEEECSSSSE-EEEEETTSCEEEEETTTT
T ss_pred EEEEEEcCC-CCEEEEECCCEEEEeecccccee---EEEeeccCCCCCCEEEEEECCCCCE-EEEEeCCCeEEEEECCCC
Confidence 889999994 45666555555555544332111 1111222 1567999999998765 555444 48999998754
Q ss_pred CCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccc
Q 047869 1943 NISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYK 2022 (2233)
Q Consensus 1943 ~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~ 2022 (2233)
.+...|.-..+.|..++|- .++..+++..+.+|.|+.-++....... ..........-.++-|+++-+
T Consensus 172 --~~~~~~~~h~~~v~~v~~s--~~~~~~~~s~~~dg~v~~wd~~~~~~~~--------~~~~~~~~~~v~~v~~sp~~~ 239 (357)
T 4g56_B 172 --AVLKSYNAHSSEVNCVAAC--PGKDTIFLSCGEDGRILLWDTRKPKPAT--------RIDFCASDTIPTSVTWHPEKD 239 (357)
T ss_dssp --EEEEEECCCSSCEEEEEEC--TTCSSCEEEEETTSCEEECCTTSSSCBC--------BCCCTTCCSCEEEEEECTTST
T ss_pred --cEEEEEcCCCCCEEEEEEc--cCCCceeeeeccCCceEEEECCCCceee--------eeeeccccccccchhhhhccc
Confidence 3556666667788877753 4555567788899999887665321110 011111223356788888755
Q ss_pred e-eeEEecCCcEEEEEcCCCcccccceeEEEEccCCCCCCCcccceeeccCC--CceEEEEeccCCCceEEEEecCCcee
Q 047869 2023 L-LFLSFQDGTTLVGRLSPNAASLSEVSYVFEEQDGKLRSAGLHRWKELLAS--SGLFFCFSSLKSNAAVAVSLGTNELI 2099 (2233)
Q Consensus 2023 L-LF~SY~~G~Sf~a~Ls~~~~sv~eis~Vfe~~~gk~~~a~L~qWsEV~~h--PGLf~cls~~~sn~pvvv~l~pd~I~ 2099 (2233)
. |..+..+|+..+-.+.... .+ ..+....+ +. ++-...+ ..++++.+. ++..-+.-+...+ .
T Consensus 240 ~~la~g~~d~~i~~wd~~~~~----~~-~~~~~~~~-----~v--~~l~~sp~~~~~lasgs~--D~~i~iwd~~~~~-~ 304 (357)
T 4g56_B 240 DTFACGDETGNVSLVNIKNPD----SA-QTSAVHSQ-----NI--TGLAYSYHSSPFLASISE--DCTVAVLDADFSE-V 304 (357)
T ss_dssp TEEEEEESSSCEEEEESSCGG----GC-EEECCCSS-----CE--EEEEECSSSSCCEEEEET--TSCEEEECTTSCE-E
T ss_pred ceEEEeecccceeEEECCCCc----Ee-EEEeccce-----eE--EEEEEcCCCCCEEEEEeC--CCEEEEEECCCCc-E
Confidence 4 4455677777666553221 11 11111100 00 1111122 234433222 3433333233333 3
Q ss_pred eeccccccCCCCCeEEEEEeecCCCCCeEEEEEeeCCceeEEec
Q 047869 2100 AQNMRHAAGSTSPLVGVTAYKPLSKDKVHCLVLHDDGSLQIYSH 2143 (2233)
Q Consensus 2100 iQeiK~~~~sSs~vdgva~y~p~s~~rttlLLLcEDGSLrIYsa 2143 (2233)
++.+.| +..+-+++. +|. +...++-=.+||++++|..
T Consensus 305 ~~~~~H----~~~V~~vaf-sP~--d~~~l~s~s~Dg~v~iW~~ 341 (357)
T 4g56_B 305 FRDLSH----RDFVTGVAW-SPL--DHSKFTTVGWDHKVLHHHL 341 (357)
T ss_dssp EEECCC----SSCEEEEEE-CSS--STTEEEEEETTSCEEEEEC
T ss_pred eEECCC----CCCEEEEEE-eCC--CCCEEEEEcCCCeEEEEEC
Confidence 445555 344556654 442 2334445578999999984
No 54
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.13 E-value=0.36 Score=54.48 Aligned_cols=192 Identities=11% Similarity=0.126 Sum_probs=118.3
Q ss_pred cCceEEEe-eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeeccc-ceEEEEecCC
Q 047869 1818 SRGRLAVG-EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYE-DCQVLTLNPR 1895 (2233)
Q Consensus 1818 ~rGrLAVa-EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLk-DC~VLTfss~ 1895 (2233)
.+.++|.+ ..++|.|++...--. ..++ +... -.|..++|+| ++++||..|.. .|.|..+...
T Consensus 75 d~~~l~s~s~Dg~v~vWd~~~~~~----------~~~~-~~~~----~~v~~~~~sp-~g~~lasg~~d~~i~v~~~~~~ 138 (354)
T 2pbi_B 75 DKRRIVSSSQDGKVIVWDSFTTNK----------EHAV-TMPC----TWVMACAYAP-SGCAIACGGLDNKCSVYPLTFD 138 (354)
T ss_dssp TSSEEEEEETTSEEEEEETTTCCE----------EEEE-ECSS----SCCCEEEECT-TSSEEEEESTTSEEEEEECCCC
T ss_pred CCCEEEEEeCCCeEEEEECCCCCc----------ceEE-ecCC----CCEEEEEECC-CCCEEEEeeCCCCEEEEEEecc
Confidence 34556654 788899998632111 0111 1111 2367899999 67888888765 3556666433
Q ss_pred Ccee-eeeeeeeccCCceEEEeEEecCCCceEEEEec-CeEEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEE
Q 047869 1896 GEVT-DRLAIELALQGAYIRRVDWVPGSPVQLMVVTN-KFVKIYDLSQDNISPLHYFTLPDDMIVDATLVIASRGKMFLI 1973 (2233)
Q Consensus 1896 GeV~-DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~-~FVKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~IL 1973 (2233)
.... -.....+..-..+|..+.|-|..+. |+..+. ..|+|||+... .+...|.-..+.|....+-..++| ..++
T Consensus 139 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~t~s~D~~v~lwd~~~~--~~~~~~~~h~~~v~~~~~~~~~~g-~~l~ 214 (354)
T 2pbi_B 139 KNENMAAKKKSVAMHTNYLSACSFTNSDMQ-ILTASGDGTCALWDVESG--QLLQSFHGHGADVLCLDLAPSETG-NTFV 214 (354)
T ss_dssp TTCCSGGGCEEEEECSSCEEEEEECSSSSE-EEEEETTSEEEEEETTTC--CEEEEEECCSSCEEEEEECCCSSC-CEEE
T ss_pred ccccccccceeeeccCCcEEEEEEeCCCCE-EEEEeCCCcEEEEeCCCC--eEEEEEcCCCCCeEEEEEEeCCCC-CEEE
Confidence 1110 0111122223678999999998765 544444 48999999654 366677766778887776655556 4677
Q ss_pred EEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccceeeEEecCCcEEEEEcC
Q 047869 1974 VLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSFQDGTTLVGRLS 2039 (2233)
Q Consensus 1974 VLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY~~G~Sf~a~Ls 2039 (2233)
.-+.+|.++.-++..... ...++ . -.+.--++-|+++-++|...-.+|+..+-.+.
T Consensus 215 sgs~Dg~v~~wd~~~~~~------~~~~~--~--h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~ 270 (354)
T 2pbi_B 215 SGGCDKKAMVWDMRSGQC------VQAFE--T--HESDVNSVRYYPSGDAFASGSDDATCRLYDLR 270 (354)
T ss_dssp EEETTSCEEEEETTTCCE------EEEEC--C--CSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred EEeCCCeEEEEECCCCcE------EEEec--C--CCCCeEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence 888999999888763210 11111 1 12234467888888888888888887776654
No 55
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.13 E-value=0.1 Score=59.17 Aligned_cols=192 Identities=12% Similarity=0.241 Sum_probs=113.3
Q ss_pred CceEEEe-eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeeccc-ceEEEEecCCC
Q 047869 1819 RGRLAVG-EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYE-DCQVLTLNPRG 1896 (2233)
Q Consensus 1819 rGrLAVa-EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLk-DC~VLTfss~G 1896 (2233)
+..||.+ ..++|-|+++..--.. .+++ .... .|..++|+| ++++||.+|.. .|.|..++...
T Consensus 78 ~~~l~s~s~D~~v~iWd~~~~~~~----------~~~~-~h~~----~v~~~~~s~-~g~~las~~~d~~v~iw~~~~~~ 141 (380)
T 3iz6_a 78 KNWIVSASQDGRLIVWNALTSQKT----------HAIK-LHCP----WVMECAFAP-NGQSVACGGLDSACSIFNLSSQA 141 (380)
T ss_dssp SSCEEEEETTSEEEEEETTTTEEE----------EEEE-CCCT----TCCCCEECT-TSSEEEECCSSSCCEEEECCCCS
T ss_pred CCEEEEEeCCCeEEEEECCCCccc----------eEEe-cCCC----CEEEEEECC-CCCEEEEeeCCCcEEEEECCCCc
Confidence 3445554 7778999986321111 1111 1111 256789988 67888888764 35666665443
Q ss_pred ceeeeeeeeeccC--CceEEEeEEecCCCceEEEEecC-eEEEEeCcCCCCCCcEEE--EcCC---CCeeEEEEEEecCC
Q 047869 1897 EVTDRLAIELALQ--GAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQDNISPLHYF--TLPD---DMIVDATLVIASRG 1968 (2233)
Q Consensus 1897 eV~DRL~LeL~Le--g~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D~lSPvyyF--~Lps---GkIrDaTfv~~e~G 1968 (2233)
.......+.-.+. ..+|..+.|.|.....|+....+ .|+|||+..... ...| ..+. +.|...++- ..++
T Consensus 142 ~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~--~~~~~~~~~~~h~~~v~~~~~~-~~~~ 218 (380)
T 3iz6_a 142 DRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQR--ISIFGSEFPSGHTADVLSLSIN-SLNA 218 (380)
T ss_dssp SCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCE--EEEECCCSSSSCCSCEEEEEEC-SSSC
T ss_pred cccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcE--EEEeecccCCCCccCeEEEEee-cCCC
Confidence 2222222222222 56788999999888878777666 899999986543 3333 2233 345555432 2234
Q ss_pred cEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccceeeEEecCCcEEEEEcC
Q 047869 1969 KMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSFQDGTTLVGRLS 2039 (2233)
Q Consensus 1969 ~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY~~G~Sf~a~Ls 2039 (2233)
..++.-|.+|.|..=++...+.. +. ...+ -.+.--++.|+++-+.|...-.+|+..+-.+.
T Consensus 219 -~~l~sgs~D~~v~~wd~~~~~~~----~~---~~~~--h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~ 279 (380)
T 3iz6_a 219 -NMFISGSCDTTVRLWDLRITSRA----VR---TYHG--HEGDINSVKFFPDGQRFGTGSDDGTCRLFDMR 279 (380)
T ss_dssp -CEEEEEETTSCEEEEETTTTCCC----CE---EECC--CSSCCCEEEECTTSSEEEEECSSSCEEEEETT
T ss_pred -CEEEEEECCCeEEEEECCCCCcc----eE---EECC--cCCCeEEEEEecCCCeEEEEcCCCeEEEEECC
Confidence 57778889999998887632211 00 0111 01223467888888888888888887776654
No 56
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.09 E-value=0.43 Score=52.98 Aligned_cols=152 Identities=9% Similarity=0.088 Sum_probs=97.9
Q ss_pred EEEEeecccCccceEEeecccceEEEEecC-CCceeeeeeeeeccCCceEEEeEEecCCCceEEEEec--CeEEEEeCcC
Q 047869 1865 EIVHLAFNSIVENYLTVAGYEDCQVLTLNP-RGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTN--KFVKIYDLSQ 1941 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGLkDC~VLTfss-~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~--~FVKIYDLS~ 1941 (2233)
.+..++|+| ++++|+|.|-.+..|..++. .|++...+.. +..+..+.|-|..+. |+++.. ..|+|||+..
T Consensus 33 ~~~~~~~s~-dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~-----~~~v~~~~~spdg~~-l~~~~~~~~~v~v~d~~~ 105 (391)
T 1l0q_A 33 NPMGAVISP-DGTKVYVANAHSNDVSIIDTATNNVIATVPA-----GSSPQGVAVSPDGKQ-VYVTNMASSTLSVIDTTS 105 (391)
T ss_dssp SEEEEEECT-TSSEEEEEEGGGTEEEEEETTTTEEEEEEEC-----SSSEEEEEECTTSSE-EEEEETTTTEEEEEETTT
T ss_pred CcceEEECC-CCCEEEEECCCCCeEEEEECCCCeEEEEEEC-----CCCccceEECCCCCE-EEEEECCCCEEEEEECCC
Confidence 367899998 67788888877777777774 5555443322 337899999998764 555553 5999999986
Q ss_pred CCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEecccc
Q 047869 1942 DNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTY 2021 (2233)
Q Consensus 1942 D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl 2021 (2233)
.. +...+.. .+.+...+ +.++|+...+..+.+|.||.-++.... ....+.. ...-.++.++++-
T Consensus 106 ~~--~~~~~~~-~~~~~~~~--~s~dg~~l~~~~~~~~~v~~~d~~~~~------~~~~~~~-----~~~~~~~~~~~dg 169 (391)
T 1l0q_A 106 NT--VAGTVKT-GKSPLGLA--LSPDGKKLYVTNNGDKTVSVINTVTKA------VINTVSV-----GRSPKGIAVTPDG 169 (391)
T ss_dssp TE--EEEEEEC-SSSEEEEE--ECTTSSEEEEEETTTTEEEEEETTTTE------EEEEEEC-----CSSEEEEEECTTS
T ss_pred Ce--EEEEEeC-CCCcceEE--ECCCCCEEEEEeCCCCEEEEEECCCCc------EEEEEec-----CCCcceEEECCCC
Confidence 53 2333333 33454444 457787666777789999988775211 1111111 2234567889998
Q ss_pred ceeeEE-ecCCcEEEEEcC
Q 047869 2022 KLLFLS-FQDGTTLVGRLS 2039 (2233)
Q Consensus 2022 ~LLF~S-Y~~G~Sf~a~Ls 2039 (2233)
+.|+++ ..+|+.++-.+.
T Consensus 170 ~~l~~~~~~~~~v~~~d~~ 188 (391)
T 1l0q_A 170 TKVYVANFDSMSISVIDTV 188 (391)
T ss_dssp SEEEEEETTTTEEEEEETT
T ss_pred CEEEEEeCCCCEEEEEECC
Confidence 888766 456776665553
No 57
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.09 E-value=0.19 Score=57.06 Aligned_cols=235 Identities=15% Similarity=0.143 Sum_probs=130.9
Q ss_pred EEeecccCccceEEeecccceEEEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeCcCCCCC
Q 047869 1867 VHLAFNSIVENYLTVAGYEDCQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQDNIS 1945 (2233)
Q Consensus 1867 lsLafNP~nEdyLAVcGLkDC~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D~lS 1945 (2233)
..+.+++ +.++++..=..+.|..+. .|+....+... .+..|..+.|-|..+. ||+.+.+ .|+|||+... .
T Consensus 97 ~~~~~s~--~~l~~~~~d~~v~lw~~~-~~~~~~~~~~~---~~~~v~~v~~s~~~~~-l~~~~~dg~i~iwd~~~~--~ 167 (401)
T 4aez_A 97 NLLDWSN--LNVVAVALERNVYVWNAD-SGSVSALAETD---ESTYVASVKWSHDGSF-LSVGLGNGLVDIYDVESQ--T 167 (401)
T ss_dssp BCEEECT--TSEEEEEETTEEEEEETT-TCCEEEEEECC---TTCCEEEEEECTTSSE-EEEEETTSCEEEEETTTC--C
T ss_pred EEEeecC--CCEEEEECCCeEEEeeCC-CCcEeEeeecC---CCCCEEEEEECCCCCE-EEEECCCCeEEEEECcCC--e
Confidence 3455554 445555544445555542 34433222211 4678999999997654 6666644 8999999755 3
Q ss_pred CcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccceee
Q 047869 1946 PLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLF 2025 (2233)
Q Consensus 1946 PvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF 2025 (2233)
+...+.-..+.|...++ +++ +++..+.+|.|+..++...... .. .... -.+.-.++.++++-++|+
T Consensus 168 ~~~~~~~~~~~v~~~~~----~~~-~l~~~~~dg~i~i~d~~~~~~~-----~~--~~~~--~~~~v~~~~~~~~~~~l~ 233 (401)
T 4aez_A 168 KLRTMAGHQARVGCLSW----NRH-VLSSGSRSGAIHHHDVRIANHQ-----IG--TLQG--HSSEVCGLAWRSDGLQLA 233 (401)
T ss_dssp EEEEECCCSSCEEEEEE----ETT-EEEEEETTSEEEEEETTSSSCE-----EE--EEEC--CSSCEEEEEECTTSSEEE
T ss_pred EEEEecCCCCceEEEEE----CCC-EEEEEcCCCCEEEEecccCcce-----ee--EEcC--CCCCeeEEEEcCCCCEEE
Confidence 56666666778888776 343 7888899999999988733211 00 1111 133456788999999999
Q ss_pred EEecCCcEEEEEcCCCcccccceeEEEEccCCCCCCCcccceeeccCCCceEEEEeccCCCceEEEEecCCceeeecccc
Q 047869 2026 LSFQDGTTLVGRLSPNAASLSEVSYVFEEQDGKLRSAGLHRWKELLASSGLFFCFSSLKSNAAVAVSLGTNELIAQNMRH 2105 (2233)
Q Consensus 2026 ~SY~~G~Sf~a~Ls~~~~sv~eis~Vfe~~~gk~~~a~L~qWsEV~~hPGLf~cls~~~sn~pvvv~l~pd~I~iQeiK~ 2105 (2233)
.+..+|+..+-.+.... .+ ..+.... .... -..|+ +.++.++++.+....+..-+.-+.. .-.++.+++
T Consensus 234 s~~~d~~v~iwd~~~~~----~~-~~~~~~~--~~v~-~~~~~--p~~~~ll~~~~gs~d~~i~i~d~~~-~~~~~~~~~ 302 (401)
T 4aez_A 234 SGGNDNVVQIWDARSSI----PK-FTKTNHN--AAVK-AVAWC--PWQSNLLATGGGTMDKQIHFWNAAT-GARVNTVDA 302 (401)
T ss_dssp EEETTSCEEEEETTCSS----EE-EEECCCS--SCCC-EEEEC--TTSTTEEEEECCTTTCEEEEEETTT-CCEEEEEEC
T ss_pred EEeCCCeEEEccCCCCC----cc-EEecCCc--ceEE-EEEEC--CCCCCEEEEecCCCCCEEEEEECCC-CCEEEEEeC
Confidence 99999998887764321 11 1111111 1111 11221 2234565553221234433333333 333344443
Q ss_pred ccCCCCCeEEEEEeecCCCCCeEEEEEe--eCCceeEEec
Q 047869 2106 AAGSTSPLVGVTAYKPLSKDKVHCLVLH--DDGSLQIYSH 2143 (2233)
Q Consensus 2106 ~~~sSs~vdgva~y~p~s~~rttlLLLc--EDGSLrIYsa 2143 (2233)
...+..++. +.+...++.-+ +||.+++|..
T Consensus 303 ----~~~v~~~~~----s~~~~~l~~~~g~~dg~i~v~~~ 334 (401)
T 4aez_A 303 ----GSQVTSLIW----SPHSKEIMSTHGFPDNNLSIWSY 334 (401)
T ss_dssp ----SSCEEEEEE----CSSSSEEEEEECTTTCEEEEEEE
T ss_pred ----CCcEEEEEE----CCCCCeEEEEeecCCCcEEEEec
Confidence 223444444 23444555544 7999999984
No 58
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.07 E-value=0.037 Score=63.71 Aligned_cols=205 Identities=14% Similarity=0.128 Sum_probs=124.0
Q ss_pred ceEEEe-eCCeEEEEechhhhcccccCCccccccccccc-cccccceEEEEeecccCccceEEeecc-cceEEEEecCCC
Q 047869 1820 GRLAVG-EGDKVAIFDVGQLIGQATIQPVTADKTNVKPL-SRNIVRFEIVHLAFNSIVENYLTVAGY-EDCQVLTLNPRG 1896 (2233)
Q Consensus 1820 GrLAVa-EgdKVTILqlsaLLkQad~s~~skdKlTLtrL-Ssa~VpFeVlsLafNP~nEdyLAVcGL-kDC~VLTfss~G 1896 (2233)
+.|+.+ ..++|.|+++..--+... .+.+. .-..-.-.|..++|+|.++++||++|- ..+.|..+...+
T Consensus 195 ~~l~s~~~dg~i~vwd~~~~~~~~~---------~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~ 265 (430)
T 2xyi_A 195 GYLLSASDDHTICLWDINATPKEHR---------VIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNN 265 (430)
T ss_dssp TEEEEECTTSCEEEEETTSCCBGGG---------EEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSC
T ss_pred CeEEEEeCCCeEEEEeCCCCCCCCc---------eeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCC
Confidence 367765 788999999865211100 00000 001223458899999988888887754 334445444332
Q ss_pred ceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEE
Q 047869 1897 EVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQDNISPLHYFTLPDDMIVDATLVIASRGKMFLIVL 1975 (2233)
Q Consensus 1897 eV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVL 1975 (2233)
.. +....+.-.+.-|..+.|-|..+..||+...+ .|+|||+... -.|.+.|.-..+.|..+.|- ++|..+++..
T Consensus 266 ~~--~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~-~~~~~~~~~h~~~v~~i~~s--p~~~~~l~s~ 340 (430)
T 2xyi_A 266 TS--KPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL-KLKLHSFESHKDEIFQVQWS--PHNETILASS 340 (430)
T ss_dssp SS--SCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCT-TSCSEEEECCSSCEEEEEEC--SSCTTEEEEE
T ss_pred CC--cceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCC-CCCeEEeecCCCCEEEEEEC--CCCCCEEEEE
Confidence 11 11111222356799999999988777777665 8999999753 35888888888889887754 6676778888
Q ss_pred ecCCceEEEEecccCCCcccc-----ceeeeecccccccCCeEEEEeccccc-eeeEEecCCcEEEEEcC
Q 047869 1976 SECGSLYRLELSVEGNVGATP-----LKEIIQFNDREIHAKGLSLYFSSTYK-LLFLSFQDGTTLVGRLS 2039 (2233)
Q Consensus 1976 SS~G~LY~Qels~s~d~g~~~-----ltEvvq~~~~q~~~~GVSVyYS~tl~-LLF~SY~~G~Sf~a~Ls 2039 (2233)
+.+|.|+.-++...+...... ..+.+....+ ..+.--++.++++-+ +|...-.+|+..+-+++
T Consensus 341 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 341 GTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG-HTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp ETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCC-CSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred eCCCcEEEEeCCCCccccCccccccCCcceEEEcCC-CCCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 999999999988532211000 0011111111 122345678888888 55555567766666553
No 59
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.05 E-value=0.5 Score=51.15 Aligned_cols=153 Identities=14% Similarity=0.172 Sum_probs=99.5
Q ss_pred EEEEeecccCccceEEeeccc-ceEEEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEec-CeEEEEeCcCC
Q 047869 1865 EIVHLAFNSIVENYLTVAGYE-DCQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTN-KFVKIYDLSQD 1942 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGLk-DC~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~-~FVKIYDLS~D 1942 (2233)
.|.+++|+| ++++||.+|.. .+.|..+ ..|.....+ .-...-|..+.|-|..+. |+.... ..|+|||+...
T Consensus 25 ~v~~~~~s~-~~~~l~s~~~dg~i~iw~~-~~~~~~~~~----~~h~~~v~~~~~~~~~~~-l~s~~~d~~i~vwd~~~~ 97 (312)
T 4ery_A 25 AVSSVKFSP-NGEWLASSSADKLIKIWGA-YDGKFEKTI----SGHKLGISDVAWSSDSNL-LVSASDDKTLKIWDVSSG 97 (312)
T ss_dssp CEEEEEECT-TSSEEEEEETTSCEEEEET-TTCCEEEEE----CCCSSCEEEEEECTTSSE-EEEEETTSEEEEEETTTC
T ss_pred cEEEEEECC-CCCEEEEeeCCCeEEEEeC-CCcccchhh----ccCCCceEEEEEcCCCCE-EEEECCCCEEEEEECCCC
Confidence 578999999 67888887754 3444443 234332222 222455899999998765 554444 49999999755
Q ss_pred CCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccc
Q 047869 1943 NISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYK 2022 (2233)
Q Consensus 1943 ~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~ 2022 (2233)
.+...+.-..+.|..+.| .++|. +++.-+.+|.|+.-++..... + ...+. -.+.-.++.|++.-+
T Consensus 98 --~~~~~~~~~~~~v~~~~~--~~~~~-~l~s~~~d~~i~iwd~~~~~~-----~---~~~~~--~~~~v~~~~~~~~~~ 162 (312)
T 4ery_A 98 --KCLKTLKGHSNYVFCCNF--NPQSN-LIVSGSFDESVRIWDVKTGKC-----L---KTLPA--HSDPVSAVHFNRDGS 162 (312)
T ss_dssp --CEEEEEECCSSCEEEEEE--CSSSS-EEEEEETTSCEEEEETTTCCE-----E---EEECC--CSSCEEEEEECTTSS
T ss_pred --cEEEEEcCCCCCEEEEEE--cCCCC-EEEEEeCCCcEEEEECCCCEE-----E---EEecC--CCCcEEEEEEcCCCC
Confidence 356667666777877765 35564 677788999999888763210 0 01111 122345688999888
Q ss_pred eeeEEecCCcEEEEEcC
Q 047869 2023 LLFLSFQDGTTLVGRLS 2039 (2233)
Q Consensus 2023 LLF~SY~~G~Sf~a~Ls 2039 (2233)
+|+.+-.+|+..+-.+.
T Consensus 163 ~l~~~~~d~~i~~wd~~ 179 (312)
T 4ery_A 163 LIVSSSYDGLCRIWDTA 179 (312)
T ss_dssp EEEEEETTSCEEEEETT
T ss_pred EEEEEeCCCcEEEEECC
Confidence 88888888887776653
No 60
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.03 E-value=0.49 Score=54.50 Aligned_cols=142 Identities=10% Similarity=0.130 Sum_probs=87.4
Q ss_pred CceEEEe-eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeeccc-ceEEEEecCCC
Q 047869 1819 RGRLAVG-EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYE-DCQVLTLNPRG 1896 (2233)
Q Consensus 1819 rGrLAVa-EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLk-DC~VLTfss~G 1896 (2233)
...+|.+ +.+.|.|+++..-- -..+++- -.-.|..++|+| ++++||.+|.. .+.|.-+. ++
T Consensus 120 ~~~l~s~s~Dg~i~vwd~~~~~----------~~~~l~~-----h~~~V~~v~~~~-~~~~l~sgs~D~~i~iwd~~-~~ 182 (410)
T 1vyh_C 120 FSVMVSASEDATIKVWDYETGD----------FERTLKG-----HTDSVQDISFDH-SGKLLASCSADMTIKLWDFQ-GF 182 (410)
T ss_dssp SSEEEEEESSSCEEEEETTTCC----------CCEEECC-----CSSCEEEEEECT-TSSEEEEEETTSCCCEEETT-SS
T ss_pred CCEEEEEeCCCeEEEEECCCCc----------EEEEEec-----cCCcEEEEEEcC-CCCEEEEEeCCCeEEEEeCC-CC
Confidence 3445554 78899999974210 0011111 112478899998 66788877753 33444432 22
Q ss_pred ceeeeeeeeeccCCceEEEeEEecCCCceEEEEec-CeEEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEE
Q 047869 1897 EVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTN-KFVKIYDLSQDNISPLHYFTLPDDMIVDATLVIASRGKMFLIVL 1975 (2233)
Q Consensus 1897 eV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~-~FVKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVL 1975 (2233)
+....+ .-....|..+.|.|..+. |+..+. ..|+|||+... .+...|.-..+.|..+.+ .++|. +++.-
T Consensus 183 ~~~~~~----~~h~~~V~~v~~~p~~~~-l~s~s~D~~i~~wd~~~~--~~~~~~~~h~~~v~~~~~--~~~g~-~l~s~ 252 (410)
T 1vyh_C 183 ECIRTM----HGHDHNVSSVSIMPNGDH-IVSASRDKTIKMWEVQTG--YCVKTFTGHREWVRMVRP--NQDGT-LIASC 252 (410)
T ss_dssp CEEECC----CCCSSCEEEEEECSSSSE-EEEEETTSEEEEEETTTC--CEEEEEECCSSCEEEEEE--CTTSS-EEEEE
T ss_pred ceeEEE----cCCCCCEEEEEEeCCCCE-EEEEeCCCeEEEEECCCC--cEEEEEeCCCccEEEEEE--CCCCC-EEEEE
Confidence 322211 112457999999998765 444444 48999999754 356667666777776653 46664 67778
Q ss_pred ecCCceEEEEec
Q 047869 1976 SECGSLYRLELS 1987 (2233)
Q Consensus 1976 SS~G~LY~Qels 1987 (2233)
+.+|.|..-++.
T Consensus 253 s~D~~v~vwd~~ 264 (410)
T 1vyh_C 253 SNDQTVRVWVVA 264 (410)
T ss_dssp ETTSCEEEEETT
T ss_pred cCCCeEEEEECC
Confidence 889999887765
No 61
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.03 E-value=0.47 Score=53.05 Aligned_cols=279 Identities=13% Similarity=0.089 Sum_probs=145.2
Q ss_pred ceEEEe-eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeeccc-ceEEEEecCCCc
Q 047869 1820 GRLAVG-EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYE-DCQVLTLNPRGE 1897 (2233)
Q Consensus 1820 GrLAVa-EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLk-DC~VLTfss~Ge 1897 (2233)
.+||.+ ..++|.++++...-.. .+ +... .+..+.+.+.++++||+++.. .+.|..+. .|.
T Consensus 69 ~~l~~~~~d~~v~i~d~~~~~~~----------~~---~~~~----~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~ 130 (420)
T 3vl1_A 69 SHLYKARLDGHDFLFNTIIRDGS----------KM---LKRA----DYTAVDTAKLQMRRFILGTTEGDIKVLDSN-FNL 130 (420)
T ss_dssp TTEEEEEETTEEEEEECCSEETT----------TT---SCSC----CEEEEEEECSSSCEEEEEETTSCEEEECTT-SCE
T ss_pred CeEEEEEcCCcEEEEEeccccee----------eE---EecC----CceEEEEEecCCCEEEEEECCCCEEEEeCC-Ccc
Confidence 445554 7789999986321111 11 1111 344554445578888887753 34455443 222
Q ss_pred eeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEe
Q 047869 1898 VTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQDNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLS 1976 (2233)
Q Consensus 1898 V~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLS 1976 (2233)
.. -.+.-....|..+.|-|..+ .|+..+.+ .|+|||+.... +...+.-..+.|..++|- ++|. .++..+
T Consensus 131 ~~----~~~~~h~~~v~~~~~~~~~~-~l~s~s~d~~i~iwd~~~~~--~~~~~~~h~~~v~~~~~~--~~~~-~l~s~~ 200 (420)
T 3vl1_A 131 QR----EIDQAHVSEITKLKFFPSGE-ALISSSQDMQLKIWSVKDGS--NPRTLIGHRATVTDIAII--DRGR-NVLSAS 200 (420)
T ss_dssp EE----EETTSSSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCC--CCEEEECCSSCEEEEEEE--TTTT-EEEEEE
T ss_pred ee----eecccccCccEEEEECCCCC-EEEEEeCCCeEEEEeCCCCc--CceEEcCCCCcEEEEEEc--CCCC-EEEEEc
Confidence 21 11122356799999999876 46666554 89999997544 556677677889888864 5665 566888
Q ss_pred cCCceEEEEecccCCCccc--------cceeeeecccc------cccCCeEEEEeccccceeeEEecCCcEEEEEcCCCc
Q 047869 1977 ECGSLYRLELSVEGNVGAT--------PLKEIIQFNDR------EIHAKGLSLYFSSTYKLLFLSFQDGTTLVGRLSPNA 2042 (2233)
Q Consensus 1977 S~G~LY~Qels~s~d~g~~--------~ltEvvq~~~~------q~~~~GVSVyYS~tl~LLF~SY~~G~Sf~a~Ls~~~ 2042 (2233)
.+|.|+.-++........+ .+....-.++. .......++.|+++-++|+.+..+|+..+-.+....
T Consensus 201 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~ 280 (420)
T 3vl1_A 201 LDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKE 280 (420)
T ss_dssp TTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCC
T ss_pred CCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCc
Confidence 9999998777522100000 00000000000 001223345677888888888888887776664321
Q ss_pred ccccceeEEEEccCCCCCCCcccceeeccCCCceEEEEeccCCCceEEEEecCCceeeeccccccCCCCCeEEEEEeecC
Q 047869 2043 ASLSEVSYVFEEQDGKLRSAGLHRWKELLASSGLFFCFSSLKSNAAVAVSLGTNELIAQNMRHAAGSTSPLVGVTAYKPL 2122 (2233)
Q Consensus 2043 ~sv~eis~Vfe~~~gk~~~a~L~qWsEV~~hPGLf~cls~~~sn~pvvv~l~pd~I~iQeiK~~~~sSs~vdgva~y~p~ 2122 (2233)
.+..+ ..+......-..|+ +.++.++++.+ .++..-+.-+...+..++.++. .....+..++. |
T Consensus 281 ----~~~~~---~~~~~~~v~~~~~~--~~~~~~l~~g~--~dg~i~vwd~~~~~~~~~~~~~--~~~~~v~~~~~--~- 344 (420)
T 3vl1_A 281 ----QTIQL---PSKFTCSCNSLTVD--GNNANYIYAGY--ENGMLAQWDLRSPECPVGEFLI--NEGTPINNVYF--A- 344 (420)
T ss_dssp ----EEEEE---CCTTSSCEEEEEEC--SSCTTEEEEEE--TTSEEEEEETTCTTSCSEEEEE--STTSCEEEEEE--E-
T ss_pred ----eeEEc---ccccCCCceeEEEe--CCCCCEEEEEe--CCCeEEEEEcCCCcCchhhhhc--cCCCCceEEEe--C-
Confidence 11111 11100100011121 12222444422 2455444444443333333332 12334444433 2
Q ss_pred CCCCeEEEEEeeCCceeEEecc
Q 047869 2123 SKDKVHCLVLHDDGSLQIYSHV 2144 (2233)
Q Consensus 2123 s~~rttlLLLcEDGSLrIYsa~ 2144 (2233)
+...++.-.+||++++|...
T Consensus 345 --~~~~l~s~~~d~~v~iw~~~ 364 (420)
T 3vl1_A 345 --AGALFVSSGFDTSIKLDIIS 364 (420)
T ss_dssp --TTEEEEEETTTEEEEEEEEC
T ss_pred --CCCEEEEecCCccEEEEecc
Confidence 23356677789999999854
No 62
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.02 E-value=0.1 Score=59.18 Aligned_cols=163 Identities=13% Similarity=0.185 Sum_probs=102.4
Q ss_pred EEEEeecccCccceEEeeccc-ceEEEEecC--CCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeCc
Q 047869 1865 EIVHLAFNSIVENYLTVAGYE-DCQVLTLNP--RGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLS 1940 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGLk-DC~VLTfss--~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS 1940 (2233)
.|..|+|+|.++++||.+|.. .+.|..+.. .|... +...... -+.-|..+.|.|..+. |+..+.+ .|+|||+.
T Consensus 65 ~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~-~~~~~~~-h~~~v~~~~~~~~~~~-l~s~s~dg~i~vwd~~ 141 (437)
T 3gre_A 65 SITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVY-SSSLTYD-CSSTVTQITMIPNFDA-FAVSSKDGQIIVLKVN 141 (437)
T ss_dssp CEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCC-SCSEEEE-CSSCEEEEEECTTSSE-EEEEETTSEEEEEEEE
T ss_pred ceEEEEECCCCCCEEEEecCCceEEEeECcccccCccc-ceeeecc-CCCCEEEEEEeCCCCE-EEEEeCCCEEEEEEec
Confidence 477999999888899888843 233444322 12111 1111111 2567999999996654 6666654 89999995
Q ss_pred CC---CC------CCcEEEEc----CCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeeccccc
Q 047869 1941 QD---NI------SPLHYFTL----PDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDRE 2007 (2233)
Q Consensus 1941 ~D---~l------SPvyyF~L----psGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q 2007 (2233)
.. .. .++..+.+ ..+.+..+.+...++| .+++..+.+|.|+.-++..... ...++.+ .
T Consensus 142 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~------~~~~~~~--~ 212 (437)
T 3gre_A 142 HYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEK-SLLVALTNLSRVIIFDIRTLER------LQIIENS--P 212 (437)
T ss_dssp EEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSC-EEEEEEETTSEEEEEETTTCCE------EEEEECC--G
T ss_pred cccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCee------eEEEccC--C
Confidence 22 11 13334443 2456777777766666 5788889999999888863211 1111111 1
Q ss_pred ccCCeEEEEeccccceeeEEecCCcEEEEEcC
Q 047869 2008 IHAKGLSLYFSSTYKLLFLSFQDGTTLVGRLS 2039 (2233)
Q Consensus 2008 ~~~~GVSVyYS~tl~LLF~SY~~G~Sf~a~Ls 2039 (2233)
-.+.-.++.|+++-++|+....+|+..+-.+.
T Consensus 213 h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 244 (437)
T 3gre_A 213 RHGAVSSICIDEECCVLILGTTRGIIDIWDIR 244 (437)
T ss_dssp GGCCEEEEEECTTSCEEEEEETTSCEEEEETT
T ss_pred CCCceEEEEECCCCCEEEEEcCCCeEEEEEcC
Confidence 23446678899999999999999988887664
No 63
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.00 E-value=0.34 Score=54.91 Aligned_cols=196 Identities=14% Similarity=0.169 Sum_probs=117.0
Q ss_pred CceEEEe-eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecc-cceEEEEec--C
Q 047869 1819 RGRLAVG-EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGY-EDCQVLTLN--P 1894 (2233)
Q Consensus 1819 rGrLAVa-EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGL-kDC~VLTfs--s 1894 (2233)
+..||.+ +.+.|.|+++...-+.... ....+. .-.-.|.+|+|+| ++++||+++. ..+.|..+. .
T Consensus 76 ~~~l~s~s~dg~v~vwd~~~~~~~~~~----~~~~~~------~h~~~v~~~~~~~-~~~~l~s~s~dg~i~vwd~~~~~ 144 (437)
T 3gre_A 76 TPYLITGSDQGVIKIWNLKEIIVGEVY----SSSLTY------DCSSTVTQITMIP-NFDAFAVSSKDGQIIVLKVNHYQ 144 (437)
T ss_dssp SCEEEEEETTSEEEEEEHHHHHTTCCC----SCSEEE------ECSSCEEEEEECT-TSSEEEEEETTSEEEEEEEEEEE
T ss_pred CCEEEEecCCceEEEeECcccccCccc----ceeeec------cCCCCEEEEEEeC-CCCEEEEEeCCCEEEEEEecccc
Confidence 4466655 7889999998764332211 001111 1234688999998 7788888876 345666664 3
Q ss_pred CCceeeeeeee----ec--c--CCceEEEeEEecCC-CceEEEEec-CeEEEEeCcCCCCCCcEEEEcC--CCCeeEEEE
Q 047869 1895 RGEVTDRLAIE----LA--L--QGAYIRRVDWVPGS-PVQLMVVTN-KFVKIYDLSQDNISPLHYFTLP--DDMIVDATL 1962 (2233)
Q Consensus 1895 ~GeV~DRL~Le----L~--L--eg~fIIKa~WLPGS-Qt~LAVVT~-~FVKIYDLS~D~lSPvyyF~Lp--sGkIrDaTf 1962 (2233)
.|........+ +. - .+.++..+.|.+.. ...|+..+. ..|+|||+.. -.+...+..+ .+.|..++|
T Consensus 145 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~--~~~~~~~~~~~h~~~v~~~~~ 222 (437)
T 3gre_A 145 QESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRT--LERLQIIENSPRHGAVSSICI 222 (437)
T ss_dssp ETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTT--CCEEEEEECCGGGCCEEEEEE
T ss_pred CCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCC--CeeeEEEccCCCCCceEEEEE
Confidence 55554432222 11 1 46678888866432 234555555 4999999965 3466777663 578888875
Q ss_pred EEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEE----EeccccceeeEEecCCcEEEEEc
Q 047869 1963 VIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSL----YFSSTYKLLFLSFQDGTTLVGRL 2038 (2233)
Q Consensus 1963 v~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSV----yYS~tl~LLF~SY~~G~Sf~a~L 2038 (2233)
.++| .+++..+.+|.|+.-++.... ....++.++ ...-.++ .|+++-++|..+-.+|+..+-.+
T Consensus 223 --s~~~-~~l~s~~~dg~i~iwd~~~~~------~~~~~~~~~---~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~ 290 (437)
T 3gre_A 223 --DEEC-CVLILGTTRGIIDIWDIRFNV------LIRSWSFGD---HAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNF 290 (437)
T ss_dssp --CTTS-CEEEEEETTSCEEEEETTTTE------EEEEEBCTT---CEEEEEEEECTTTCTTEEEEEEESTTEEEEEEET
T ss_pred --CCCC-CEEEEEcCCCeEEEEEcCCcc------EEEEEecCC---CCceEEEEeccccCCCccEEEEEcCCCcEEEEEc
Confidence 4555 478888999999988887311 001111111 1112344 34455667777778887777665
Q ss_pred C
Q 047869 2039 S 2039 (2233)
Q Consensus 2039 s 2039 (2233)
.
T Consensus 291 ~ 291 (437)
T 3gre_A 291 V 291 (437)
T ss_dssp T
T ss_pred C
Confidence 4
No 64
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.97 E-value=0.67 Score=51.63 Aligned_cols=154 Identities=10% Similarity=0.162 Sum_probs=99.2
Q ss_pred EEEEeecccCccceEEeecccceEEEEecC-CCceeeeeeeeeccCCceEEEeEEecCCCceEEEEec-CeEEEEeCcCC
Q 047869 1865 EIVHLAFNSIVENYLTVAGYEDCQVLTLNP-RGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTN-KFVKIYDLSQD 1942 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGLkDC~VLTfss-~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~-~FVKIYDLS~D 1942 (2233)
.|..|+|+| ++++||.+| .|..|.-++. +|.... .+......|..+.|-|..+. ||.... ..|+|||+...
T Consensus 57 ~v~~~~~s~-d~~~l~s~s-~Dg~v~iWd~~~~~~~~----~~~~~~~~v~~~~~s~~~~~-l~s~~~d~~v~iw~~~~~ 129 (340)
T 1got_B 57 KIYAMHWGT-DSRLLLSAS-QDGKLIIWDSYTTNKVH----AIPLRSSWVMTCAYAPSGNY-VACGGLDNICSIYNLKTR 129 (340)
T ss_dssp CEEEEEECT-TSSEEEEEE-TTTEEEEEETTTCCEEE----EEECSSSCEEEEEECTTSSE-EEEEETTCEEEEEETTTC
T ss_pred ceEEEEECC-CCCEEEEEe-CCCcEEEEECCCCCcce----EeecCCccEEEEEECCCCCE-EEEEeCCCeEEEEECccC
Confidence 466889988 667887766 4556666653 333322 22334667999999998765 555554 48999999875
Q ss_pred CCC--CcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccc
Q 047869 1943 NIS--PLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSST 2020 (2233)
Q Consensus 1943 ~lS--PvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~t 2020 (2233)
.-. +...+.--.+.|..+.|. +++. ++..|.+|.|+.-++..... .. ...+ -.+.-.++.++++
T Consensus 130 ~~~~~~~~~~~~h~~~v~~~~~~--~~~~--l~s~s~d~~i~~wd~~~~~~------~~--~~~~--h~~~v~~~~~~~~ 195 (340)
T 1got_B 130 EGNVRVSRELAGHTGYLSCCRFL--DDNQ--IVTSSGDTTCALWDIETGQQ------TT--TFTG--HTGDVMSLSLAPD 195 (340)
T ss_dssp SBSCEEEEEEECCSSCEEEEEEE--ETTE--EEEEETTSCEEEEETTTTEE------EE--EECC--CSSCEEEEEECTT
T ss_pred CCcceeEEEecCCCccEEEEEEC--CCCc--EEEEECCCcEEEEECCCCcE------EE--EEcC--CCCceEEEEECCC
Confidence 432 334444456778777764 4453 77888999999887753210 00 1111 1234567889998
Q ss_pred cceeeEEecCCcEEEEEcC
Q 047869 2021 YKLLFLSFQDGTTLVGRLS 2039 (2233)
Q Consensus 2021 l~LLF~SY~~G~Sf~a~Ls 2039 (2233)
-+++..+-.+|+..+-.+.
T Consensus 196 ~~~l~sg~~d~~v~~wd~~ 214 (340)
T 1got_B 196 TRLFVSGACDASAKLWDVR 214 (340)
T ss_dssp SSEEEEEETTSCEEEEETT
T ss_pred CCEEEEEeCCCcEEEEECC
Confidence 8888888888887776653
No 65
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.97 E-value=0.47 Score=50.18 Aligned_cols=148 Identities=9% Similarity=0.013 Sum_probs=93.2
Q ss_pred EEEEeecccCccceEEeecccc-eEEEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEec-CeEEEEeCcCC
Q 047869 1865 EIVHLAFNSIVENYLTVAGYED-CQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTN-KFVKIYDLSQD 1942 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGLkD-C~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~-~FVKIYDLS~D 1942 (2233)
.|..|+| | ++++||+++... +.|..+ .++.....+. .....|..+.|-|..+. |++.+. ..|++||+...
T Consensus 20 ~v~~~~~-~-~~~~l~s~~~dg~v~vw~~-~~~~~~~~~~----~~~~~v~~~~~~~~~~~-l~~~~~dg~i~~~~~~~~ 91 (313)
T 3odt_A 20 DVRDVVA-V-DDSKVASVSRDGTVRLWSK-DDQWLGTVVY----TGQGFLNSVCYDSEKEL-LLFGGKDTMINGVPLFAT 91 (313)
T ss_dssp CEEEEEE-E-ETTEEEEEETTSEEEEEEE-SSSEEEEEEE----ECSSCEEEEEEETTTTE-EEEEETTSCEEEEETTCC
T ss_pred CcEEEEe-c-CCCEEEEEEcCCcEEEEEC-CCCEEEEEee----cCCccEEEEEECCCCCE-EEEecCCCeEEEEEeeec
Confidence 5778888 5 677888777543 455555 3333332222 23678999999998765 555544 48999999865
Q ss_pred C-CCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEecc-c
Q 047869 1943 N-ISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSS-T 2020 (2233)
Q Consensus 1943 ~-lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~-t 2020 (2233)
. ..+...+.-..+.|....+ ++. .+++.+.+|.++.-+.. .....++ . ..+.-.++.+++ .
T Consensus 92 ~~~~~~~~~~~~~~~i~~~~~----~~~-~l~~~~~d~~i~~~d~~--------~~~~~~~--~--~~~~v~~~~~~~~~ 154 (313)
T 3odt_A 92 SGEDPLYTLIGHQGNVCSLSF----QDG-VVISGSWDKTAKVWKEG--------SLVYNLQ--A--HNASVWDAKVVSFS 154 (313)
T ss_dssp TTSCC-CEECCCSSCEEEEEE----ETT-EEEEEETTSEEEEEETT--------EEEEEEE--C--CSSCEEEEEEEETT
T ss_pred CCCCcccchhhcccCEEEEEe----cCC-EEEEEeCCCCEEEEcCC--------cEEEecc--c--CCCceeEEEEccCC
Confidence 4 3466777777888888876 243 67888999999976511 0011111 1 123344566665 7
Q ss_pred cceeeEEecCCcEEEEE
Q 047869 2021 YKLLFLSFQDGTTLVGR 2037 (2233)
Q Consensus 2021 l~LLF~SY~~G~Sf~a~ 2037 (2233)
-+.|+....+|+..+-.
T Consensus 155 ~~~l~~~~~d~~i~i~d 171 (313)
T 3odt_A 155 ENKFLTASADKTIKLWQ 171 (313)
T ss_dssp TTEEEEEETTSCEEEEE
T ss_pred CCEEEEEECCCCEEEEe
Confidence 77788777888776654
No 66
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=96.93 E-value=0.11 Score=58.38 Aligned_cols=170 Identities=15% Similarity=0.226 Sum_probs=97.6
Q ss_pred EEEEeecccCccceEEeeccc-ceEEEEecCCCcee----ee--eeeeeccCC------------ceEEEeEEecCCC-c
Q 047869 1865 EIVHLAFNSIVENYLTVAGYE-DCQVLTLNPRGEVT----DR--LAIELALQG------------AYIRRVDWVPGSP-V 1924 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGLk-DC~VLTfss~GeV~----DR--L~LeL~Leg------------~fIIKa~WLPGSQ-t 1924 (2233)
.|..|+|+| ++++||++|.. .+.|..+....... .. +.-.+.-.. .-|..+.|.|... .
T Consensus 30 ~V~~v~~s~-~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~ 108 (447)
T 3dw8_B 30 IISTVEFNH-SGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAA 108 (447)
T ss_dssp SEEEEEECS-SSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSS
T ss_pred cEEEEEECC-CCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcc
Confidence 578999999 88999988764 46666665433100 00 111111112 5589999999974 4
Q ss_pred eEEEEecC-eEEEEeCcCCCCC-------------------------------------CcEEE-EcCCCCeeEEEEEEe
Q 047869 1925 QLMVVTNK-FVKIYDLSQDNIS-------------------------------------PLHYF-TLPDDMIVDATLVIA 1965 (2233)
Q Consensus 1925 ~LAVVT~~-FVKIYDLS~D~lS-------------------------------------PvyyF-~LpsGkIrDaTfv~~ 1965 (2233)
.|+..+.+ .|+|||+...... |...| .-..+.|.+++|-
T Consensus 109 ~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-- 186 (447)
T 3dw8_B 109 QFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISIN-- 186 (447)
T ss_dssp EEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEEC--
T ss_pred eEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEc--
Confidence 56666655 9999998752210 11122 1234556666643
Q ss_pred cCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEecccc-ceeeEEecCCcEEEEEcCCC
Q 047869 1966 SRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTY-KLLFLSFQDGTTLVGRLSPN 2041 (2233)
Q Consensus 1966 e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl-~LLF~SY~~G~Sf~a~Ls~~ 2041 (2233)
++|+.++ . +++|.|+.-++...+.. ....+........-.+.-.++.|++.- ++|+.+-.+|+..+-.+...
T Consensus 187 ~~~~~l~-s-~~d~~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~ 259 (447)
T 3dw8_B 187 SDYETYL-S-ADDLRINLWHLEITDRS--FNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRAS 259 (447)
T ss_dssp TTSSEEE-E-ECSSEEEEEETTEEEEE--EEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTC
T ss_pred CCCCEEE-E-eCCCeEEEEECCCCCce--eeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCC
Confidence 5676443 3 37999998888732211 000000000011113345678999987 88888889998888776543
No 67
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.92 E-value=0.41 Score=51.44 Aligned_cols=118 Identities=9% Similarity=0.063 Sum_probs=72.5
Q ss_pred EEEEeecccCccceEEeeccc-ceEEEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecCeEEEEeCcCCC
Q 047869 1865 EIVHLAFNSIVENYLTVAGYE-DCQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNKFVKIYDLSQDN 1943 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGLk-DC~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~FVKIYDLS~D~ 1943 (2233)
.|.+|+|+|.++++||-+|.. .+.|-.+...........-.+.--...|..+.|-|..+..++.-....|++||.....
T Consensus 40 ~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~ 119 (340)
T 4aow_A 40 WVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGT 119 (340)
T ss_dssp CEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred CEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccc
Confidence 478999999989999999863 3455555443222111111122225679999999987764434444589999987653
Q ss_pred CCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEec
Q 047869 1944 ISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELS 1987 (2233)
Q Consensus 1944 lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels 1987 (2233)
....+....+.+.... ....+. .++..+.+|.+..-++.
T Consensus 120 --~~~~~~~~~~~~~~~~--~~~~~~-~l~s~s~d~~~~~~d~~ 158 (340)
T 4aow_A 120 --TTRRFVGHTKDVLSVA--FSSDNR-QIVSGSRDKTIKLWNTL 158 (340)
T ss_dssp --EEEEEECCSSCEEEEE--ECTTSS-CEEEEETTSCEEEECTT
T ss_pred --eeeeecCCCCceeEEE--EeecCc-cceeecCCCeEEEEEeC
Confidence 3444444444444433 234453 56777888988876554
No 68
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=96.83 E-value=0.45 Score=51.36 Aligned_cols=190 Identities=11% Similarity=0.029 Sum_probs=115.2
Q ss_pred cCceEEEe-eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccc-eEEeecccceEEEEecC-
Q 047869 1818 SRGRLAVG-EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVEN-YLTVAGYEDCQVLTLNP- 1894 (2233)
Q Consensus 1818 ~rGrLAVa-EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEd-yLAVcGLkDC~VLTfss- 1894 (2233)
.+..||++ ..+.|.|+++..--.+.. + .....-.-.|..++|+|. ++ +||++| .+-.|..++-
T Consensus 22 ~~~~l~~~~~d~~v~iw~~~~~~~~~~----------~--~~~~~~~~~v~~~~~~~~-~~~~l~~~~-~dg~i~~wd~~ 87 (342)
T 1yfq_A 22 SKSLLLITSWDGSLTVYKFDIQAKNVD----------L--LQSLRYKHPLLCCNFIDN-TDLQIYVGT-VQGEILKVDLI 87 (342)
T ss_dssp GGTEEEEEETTSEEEEEEEETTTTEEE----------E--EEEEECSSCEEEEEEEES-SSEEEEEEE-TTSCEEEECSS
T ss_pred CCCEEEEEcCCCeEEEEEeCCCCcccc----------c--eeeeecCCceEEEEECCC-CCcEEEEEc-CCCeEEEEEec
Confidence 34456665 678899998853210000 0 011123346889999984 67 777666 4555555554
Q ss_pred -CCceeeeeeeeecc--CCceEEEeEEecCCCceEEEEecC-eEEEEeCcCCC-------CCCcEEEEcCCCCeeEEEEE
Q 047869 1895 -RGEVTDRLAIELAL--QGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQDN-------ISPLHYFTLPDDMIVDATLV 1963 (2233)
Q Consensus 1895 -~GeV~DRL~LeL~L--eg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D~-------lSPvyyF~LpsGkIrDaTfv 1963 (2233)
.|.. ..+.- ....|..+.|.| ...|+..+.+ .|+|||+.... -.|...+. ..+.|..+++-
T Consensus 88 ~~~~~-----~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~ 159 (342)
T 1yfq_A 88 GSPSF-----QALTNNEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTN 159 (342)
T ss_dssp SSSSE-----EECBSCCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEEC
T ss_pred cCCce-----EeccccCCCCceEEEEeCC--CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEec
Confidence 3332 22222 356799999999 3456655555 89999987500 22444444 45678777653
Q ss_pred EecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEecc-ccceeeEEecCCcEEEEEcCCC
Q 047869 1964 IASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSS-TYKLLFLSFQDGTTLVGRLSPN 2041 (2233)
Q Consensus 1964 ~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~-tl~LLF~SY~~G~Sf~a~Ls~~ 2041 (2233)
+++ +++.+.+|.|+.-++...+.. .... ... .....-.++.+++ .-++++.+..+|+..+-.++..
T Consensus 160 --~~~---l~~~~~d~~i~i~d~~~~~~~---~~~~-~~~---~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 160 --SSR---LIVGMNNSQVQWFRLPLCEDD---NGTI-EES---GLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQ 226 (342)
T ss_dssp --SSE---EEEEESTTEEEEEESSCCTTC---CCEE-EEC---SCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTT
T ss_pred --CCc---EEEEeCCCeEEEEECCccccc---ccee-eec---CCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCC
Confidence 333 888899999999888741211 0000 011 1123456788999 8899999999999888666544
No 69
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.83 E-value=0.71 Score=52.57 Aligned_cols=158 Identities=11% Similarity=0.083 Sum_probs=93.2
Q ss_pred EEEEeecccCccceEEeecc-cceEEEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeCcCC
Q 047869 1865 EIVHLAFNSIVENYLTVAGY-EDCQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQD 1942 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGL-kDC~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D 1942 (2233)
.|..++|+|. ++|++++. ..+.|.-+..+ +..-.....+.--...|..+.|-|..+. ||....+ .|||||+...
T Consensus 84 ~v~~~~~s~d--~~l~~~s~dg~v~lWd~~~~-~~~~~~~~~~~~H~~~V~~v~~spdg~~-l~sgs~d~~i~iwd~~~~ 159 (344)
T 4gqb_B 84 GVADLTWVGE--RGILVASDSGAVELWELDEN-ETLIVSKFCKYEHDDIVSTVSVLSSGTQ-AVSGSKDICIKVWDLAQQ 159 (344)
T ss_dssp CEEEEEEETT--TEEEEEETTSEEEEEEECTT-SSCEEEEEEEECCSSCEEEEEECTTSSE-EEEEETTSCEEEEETTTT
T ss_pred CEEEEEEeCC--CeEEEEECCCEEEEEeccCC-CceeEeeccccCCCCCEEEEEECCCCCE-EEEEeCCCeEEEEECCCC
Confidence 4889999983 45665543 23455555433 2222222212112567999999998764 6666655 8999999754
Q ss_pred CCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccc
Q 047869 1943 NISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYK 2022 (2233)
Q Consensus 1943 ~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~ 2022 (2233)
.+...|.--.+.|....|- .+|..+++.-|.+|.|..-++....... ++........-.++.+++.-.
T Consensus 160 --~~~~~~~~h~~~V~~~~~~--~~~~~~l~s~s~D~~v~iwd~~~~~~~~--------~~~~~~~~~~~~~~~~~p~~~ 227 (344)
T 4gqb_B 160 --VVLSSYRAHAAQVTCVAAS--PHKDSVFLSCSEDNRILLWDTRCPKPAS--------QIGCSAPGYLPTSLAWHPQQS 227 (344)
T ss_dssp --EEEEEECCCSSCEEEEEEC--SSCTTEEEEEETTSCEEEEETTSSSCEE--------ECC----CCCEEEEEECSSCT
T ss_pred --cEEEEEcCcCCceEEEEec--CCCCCceeeeccccccccccccccceee--------eeecceeeccceeeeecCCCC
Confidence 3555565557788877653 5565567778889999988776322110 111111122345677877544
Q ss_pred -eeeEEecCCcEEEEEc
Q 047869 2023 -LLFLSFQDGTTLVGRL 2038 (2233)
Q Consensus 2023 -LLF~SY~~G~Sf~a~L 2038 (2233)
+|.....+|+..+-.+
T Consensus 228 ~~l~sg~~dg~v~~wd~ 244 (344)
T 4gqb_B 228 EVFVFGDENGTVSLVDT 244 (344)
T ss_dssp TEEEEEETTSEEEEEES
T ss_pred cceEEeccCCcEEEEEC
Confidence 4445567777666544
No 70
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=96.82 E-value=0.47 Score=55.53 Aligned_cols=150 Identities=15% Similarity=0.173 Sum_probs=97.4
Q ss_pred eEEEEeecccCccceEEeecccceEEEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeCcCC
Q 047869 1864 FEIVHLAFNSIVENYLTVAGYEDCQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQD 1942 (2233)
Q Consensus 1864 FeVlsLafNP~nEdyLAVcGLkDC~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D 1942 (2233)
-.|..++|+| ++++||+++ ++=.|..++.+|+....+.- ...-|..+.|-|..+. ||..+.+ .|+|||.+.
T Consensus 345 ~~v~~~~~s~-~g~~l~~~~-~dg~v~~~~~~~~~~~~~~~----~~~~v~~~~~s~dg~~-l~~~~~d~~v~~~~~~~- 416 (577)
T 2ymu_A 345 SSVWGVAFSP-DGQTIASAS-DDKTVKLWNRNGQLLQTLTG----HSSSVRGVAFSPDGQT-IASASDDKTVKLWNRNG- 416 (577)
T ss_dssp SCEEEEEECT-TSSEEEEEE-TTSEEEEEETTCCEEEEEEC----CSSCEEEEEECTTSSC-EEEEETTSEEEEECTTC-
T ss_pred CCEEEEEECC-CCCEEEEEe-CCCEEEEEcCCCCEEEEecC----CCCCeEEEEECCCCCE-EEEEeCCCEEEEEeCCC-
Confidence 3577899988 667777655 44455556677765544322 2456889999998876 5555554 899999643
Q ss_pred CCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccc
Q 047869 1943 NISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYK 2022 (2233)
Q Consensus 1943 ~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~ 2022 (2233)
.+...+.-..+.|...+| .++|+ +++..+.+|.|+.-++. + . ....+. . -.+.--++-||++-+
T Consensus 417 --~~~~~~~~~~~~v~~~~~--s~d~~-~l~~~~~d~~v~~w~~~--~---~--~~~~~~--~--~~~~v~~~~~spd~~ 480 (577)
T 2ymu_A 417 --QLLQTLTGHSSSVWGVAF--SPDDQ-TIASASDDKTVKLWNRN--G---Q--LLQTLT--G--HSSSVRGVAFSPDGQ 480 (577)
T ss_dssp --CEEEEEECCSSCEEEEEE--CTTSS-EEEEEETTSEEEEEETT--S---C--EEEEEE--C--CSSCEEEEEECTTSC
T ss_pred --CEEEEecCCCCCeEEEEE--CCCCC-EEEEEcCCCEEEEEECC--C---C--EEEEEc--C--CCCCEEEEEEcCCCC
Confidence 345566666778887664 46665 67778899999876643 1 0 111111 1 122344688999988
Q ss_pred eeeEEecCCcEEEEE
Q 047869 2023 LLFLSFQDGTTLVGR 2037 (2233)
Q Consensus 2023 LLF~SY~~G~Sf~a~ 2037 (2233)
+|..+-.+|+..+-.
T Consensus 481 ~las~~~d~~i~iw~ 495 (577)
T 2ymu_A 481 TIASASDDKTVKLWN 495 (577)
T ss_dssp EEEEEETTSEEEEEE
T ss_pred EEEEEeCCCEEEEEc
Confidence 888888888766644
No 71
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=96.75 E-value=1 Score=51.96 Aligned_cols=119 Identities=12% Similarity=0.154 Sum_probs=76.0
Q ss_pred eEEEeEEecCCCceEEEEec-CeEEEEeCcCCCCCCcEEEE--cCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecc
Q 047869 1912 YIRRVDWVPGSPVQLMVVTN-KFVKIYDLSQDNISPLHYFT--LPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSV 1988 (2233)
Q Consensus 1912 fIIKa~WLPGSQt~LAVVT~-~FVKIYDLS~D~lSPvyyF~--LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~ 1988 (2233)
.|..+.|-|..+..+|+... ..|+|||+..+.-.+...+. -..+.|..++| .++|. ++++.+.+|.+|.-++..
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~--sp~~~-~l~~~~~~g~v~~~~~~~ 180 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISI--AEDDT-TVIIADKFGDVYSIDINS 180 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEE--CTTSS-EEEEEETTSEEEEEETTS
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEE--cCCCC-EEEEEeCCCcEEEEecCC
Confidence 69999999998765565544 58999999854445555554 23456776664 46674 667778899999887763
Q ss_pred cCCCccccceeeeecccccccCCeEEEEeccc---cceeeEEecCCcEEEEEcC
Q 047869 1989 EGNVGATPLKEIIQFNDREIHAKGLSLYFSST---YKLLFLSFQDGTTLVGRLS 2039 (2233)
Q Consensus 1989 s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~t---l~LLF~SY~~G~Sf~a~Ls 2039 (2233)
..... . ....+. + -.+.-.++.|+++ -++|+.+-.+|+..+-.+.
T Consensus 181 ~~~~~-~-~~~~~~--~--h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~ 228 (450)
T 2vdu_B 181 IPEEK-F-TQEPIL--G--HVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYP 228 (450)
T ss_dssp CCCSS-C-CCCCSE--E--CSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEES
T ss_pred ccccc-c-cceeee--c--ccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECC
Confidence 22110 0 000111 1 1233456788888 7788888888887776653
No 72
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.75 E-value=0.55 Score=50.72 Aligned_cols=146 Identities=10% Similarity=0.079 Sum_probs=89.6
Q ss_pred ceEEEe-eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeeccc-ceEEEEecCCCc
Q 047869 1820 GRLAVG-EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYE-DCQVLTLNPRGE 1897 (2233)
Q Consensus 1820 GrLAVa-EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLk-DC~VLTfss~Ge 1897 (2233)
..+|++ +.+.|.|+++...- ...++. .-.-.|..++|+|.++++||+++.. .+.|..+. .|+
T Consensus 86 ~~l~~~~~dg~i~v~d~~~~~----------~~~~~~-----~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~ 149 (366)
T 3k26_A 86 PLLAVAGSRGIIRIINPITMQ----------CIKHYV-----GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQ-TDT 149 (366)
T ss_dssp EEEEEEETTCEEEEECTTTCC----------EEEEEE-----SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETT-TTE
T ss_pred CEEEEecCCCEEEEEEchhce----------Eeeeec-----CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEee-cCe
Confidence 356665 77899999875310 001111 1234688999999888998888763 45555553 233
Q ss_pred eeeeeeeeeccCCceEEEeEEecCCCceEEEEec-CeEEEEeCcCCCCC----------C----------------cEEE
Q 047869 1898 VTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTN-KFVKIYDLSQDNIS----------P----------------LHYF 1950 (2233)
Q Consensus 1898 V~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~-~FVKIYDLS~D~lS----------P----------------vyyF 1950 (2233)
....+. .+.-....|..+.|-|..+. |+..+. ..|+|||+...... | ....
T Consensus 150 ~~~~~~-~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (366)
T 3k26_A 150 LVAIFG-GVEGHRDEVLSADYDLLGEK-IMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTR 227 (366)
T ss_dssp EEEEEC-STTSCSSCEEEEEECTTSSE-EEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEEC
T ss_pred EEEEec-ccccccCceeEEEECCCCCE-EEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccc
Confidence 222111 00223678999999997765 555554 49999999754211 0 0111
Q ss_pred EcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecc
Q 047869 1951 TLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSV 1988 (2233)
Q Consensus 1951 ~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~ 1988 (2233)
....+.|..+.|- |. +++..+.+|.|+.-++..
T Consensus 228 ~~~~~~v~~~~~~----~~-~l~~~~~d~~i~~wd~~~ 260 (366)
T 3k26_A 228 DIHRNYVDCVRWL----GD-LILSKSCENAIVCWKPGK 260 (366)
T ss_dssp SSCSSCCCEEEEE----TT-EEEEECSSSEEEEEEESS
T ss_pred cCCcceEEEEEEc----CC-EEEEEecCCEEEEEeCCC
Confidence 1145667777754 43 788889999999888764
No 73
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.75 E-value=0.88 Score=50.06 Aligned_cols=161 Identities=10% Similarity=0.107 Sum_probs=86.6
Q ss_pred EEeecccCccceEEeecc----cceEEEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEe--cCeEEEEeCc
Q 047869 1867 VHLAFNSIVENYLTVAGY----EDCQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVT--NKFVKIYDLS 1940 (2233)
Q Consensus 1867 lsLafNP~nEdyLAVcGL----kDC~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT--~~FVKIYDLS 1940 (2233)
..|+|+| +++ |++++- ..+.++.+ ..|+.. .+. .+.-.+..+..+.|-|..+. |+++. ...|+|||+.
T Consensus 43 ~~~a~sp-dg~-l~~~~~~~~~~~v~~~~~-~~g~~~-~~~-~~~~~~~~p~~~a~spdg~~-l~~~~~~~~~v~v~~~~ 116 (347)
T 3hfq_A 43 TYLALSA-KDC-LYSVDKEDDEGGIAAWQI-DGQTAH-KLN-TVVAPGTPPAYVAVDEARQL-VYSANYHKGTAEVMKIA 116 (347)
T ss_dssp CCEEECT-TCE-EEEEEEETTEEEEEEEEE-ETTEEE-EEE-EEEEESCCCSEEEEETTTTE-EEEEETTTTEEEEEEEC
T ss_pred ceEEEcc-CCe-EEEEEecCCCceEEEEEe-cCCcEE-Eee-eeecCCCCCEEEEECCCCCE-EEEEeCCCCEEEEEEeC
Confidence 4688999 555 666665 45666666 334321 111 11122455666778888765 44444 3589999996
Q ss_pred CC-CCCCcEEEEcCC-C--------CeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccC
Q 047869 1941 QD-NISPLHYFTLPD-D--------MIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHA 2010 (2233)
Q Consensus 1941 ~D-~lSPvyyF~Lps-G--------kIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~ 2010 (2233)
.+ ...+...+.... | .+..++ +.++|+ .++.-+.+|.++.-++... +..........+. ..
T Consensus 117 ~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~--~spdg~-l~v~~~~~~~v~~~~~~~~---g~~~~~~~~~~~~---g~ 187 (347)
T 3hfq_A 117 ADGALTLTDTVQHSGHGPRPEQDGSHIHYTD--LTPDNR-LAVIDLGSDKVYVYNVSDA---GQLSEQSVLTMEA---GF 187 (347)
T ss_dssp TTSCEEEEEEEECCCCCSSTTCSSCCEEEEE--ECTTSC-EEEEETTTTEEEEEEECTT---SCEEEEEEEECCT---TC
T ss_pred CCCCeeecceeecCCCCCCccccCCCceEEE--ECCCCc-EEEEeCCCCEEEEEEECCC---CcEEEeeeEEcCC---CC
Confidence 54 333333333221 1 133333 357787 3344445677887777622 2221111122221 22
Q ss_pred CeEEEEeccccceeeEE-ecCCcEEEEEcCCCc
Q 047869 2011 KGLSLYFSSTYKLLFLS-FQDGTTLVGRLSPNA 2042 (2233)
Q Consensus 2011 ~GVSVyYS~tl~LLF~S-Y~~G~Sf~a~Ls~~~ 2042 (2233)
+-..+-+|++-+.|+++ ..+|+..+-.++..+
T Consensus 188 ~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~ 220 (347)
T 3hfq_A 188 GPRHLVFSPDGQYAFLAGELSSQIASLKYDTQT 220 (347)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEEETTT
T ss_pred CCceEEECCCCCEEEEEeCCCCEEEEEEecCCC
Confidence 33457899999977775 556666666665433
No 74
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.74 E-value=0.086 Score=58.18 Aligned_cols=161 Identities=14% Similarity=0.109 Sum_probs=99.1
Q ss_pred EEEEeecccCccceEEeeccc-ceEEEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEec-CeEEEEeCcCC
Q 047869 1865 EIVHLAFNSIVENYLTVAGYE-DCQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTN-KFVKIYDLSQD 1942 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGLk-DC~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~-~FVKIYDLS~D 1942 (2233)
.|..++|+| ++++||+++.. .+.|..+...+ . +..-.+.-....|..+.|-|..+. ||..+. ..|+|||+...
T Consensus 13 ~v~~~~~s~-~g~~l~~~~~d~~i~iw~~~~~~-~--~~~~~~~~h~~~v~~~~~s~~~~~-l~s~s~d~~v~vwd~~~~ 87 (377)
T 3dwl_C 13 PSYEHAFNS-QRTEFVTTTATNQVELYEQDGNG-W--KHARTFSDHDKIVTCVDWAPKSNR-IVTCSQDRNAYVYEKRPD 87 (377)
T ss_dssp CCSCCEECS-SSSEEECCCSSSCBCEEEEETTE-E--EECCCBCCCSSCEEEEEECTTTCC-EEEEETTSSEEEC-----
T ss_pred cEEEEEECC-CCCEEEEecCCCEEEEEEccCCc-e--EEEEEEecCCceEEEEEEeCCCCE-EEEEeCCCeEEEEEcCCC
Confidence 356899999 78888888543 46666665331 0 111112222567999999998754 665555 49999999887
Q ss_pred C-CCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEecccc
Q 047869 1943 N-ISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTY 2021 (2233)
Q Consensus 1943 ~-lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl 2021 (2233)
. ..|...+.-..+.|..++|- ++|+ +++..+.+|.|+.-++..... ..+...+..+ ..+.-.++-|+++-
T Consensus 88 ~~~~~~~~~~~~~~~v~~~~~~--~~~~-~l~~~~~d~~i~iwd~~~~~~---~~~~~~~~~~---h~~~v~~~~~~~~~ 158 (377)
T 3dwl_C 88 GTWKQTLVLLRLNRAATFVRWS--PNED-KFAVGSGARVISVCYFEQEND---WWVSKHLKRP---LRSTILSLDWHPNN 158 (377)
T ss_dssp -CCCCEEECCCCSSCEEEEECC--TTSS-CCEEEESSSCEEECCC--------CCCCEEECSS---CCSCEEEEEECTTS
T ss_pred CceeeeeEecccCCceEEEEEC--CCCC-EEEEEecCCeEEEEEECCccc---ceeeeEeecc---cCCCeEEEEEcCCC
Confidence 7 66777766677788877754 4564 677888999999876653221 0111111111 23445678899998
Q ss_pred ceeeEEecCCcEEEEEcC
Q 047869 2022 KLLFLSFQDGTTLVGRLS 2039 (2233)
Q Consensus 2022 ~LLF~SY~~G~Sf~a~Ls 2039 (2233)
++|...-.+|+..+-.+.
T Consensus 159 ~~l~~~~~d~~i~iwd~~ 176 (377)
T 3dwl_C 159 VLLAAGCADRKAYVLSAY 176 (377)
T ss_dssp SEEEEEESSSCEEEEEEC
T ss_pred CEEEEEeCCCEEEEEEEE
Confidence 888888888888776663
No 75
>3ny3_A E3 ubiquitin-protein ligase UBR2; zinc finger-like, ubiquitin ligase, protein binding, lygase,; 1.60A {Homo sapiens} PDB: 3ny2_A 3ny1_A
Probab=96.71 E-value=0.0013 Score=63.17 Aligned_cols=48 Identities=29% Similarity=0.558 Sum_probs=41.2
Q ss_pred ccceEeeccCCCCCCceeehhhhhh-hcCCCcEEEEe-ecceeeecCCCC
Q 047869 1602 EQHWYFCYTCDLTVSKGCCSVCAKV-CHRGHRVVYSR-SSRFFCDCGAGG 1649 (2233)
Q Consensus 1602 ~Q~~Y~C~TC~l~~~~GVC~aCA~v-CHkGHdVvyl~-k~~FfCDCGa~~ 1649 (2233)
....|.|.||..++.-.+|..|-.. =|+||++.... .+...||||...
T Consensus 14 ge~~Y~C~~C~~d~tc~lC~~CF~~~~H~gH~~~~~~s~~gG~CDCGD~e 63 (75)
T 3ny3_A 14 GEPTYSCRDCAVDPTCVLCMECFLGSIHRDHRYRMTTSGGGGFCDCGDTE 63 (75)
T ss_dssp TCEEEEETTTBSSTTCCBCHHHHHTSGGGGSCEEEEECCSCBBCCTTCTT
T ss_pred CCEEEECccCCCCCCeeEChHHCCCCCcCCceEEEEEcCCCCEecCcCHH
Confidence 4558999999999888999999887 79999988875 457999999854
No 76
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.68 E-value=1.2 Score=49.92 Aligned_cols=197 Identities=13% Similarity=0.128 Sum_probs=112.0
Q ss_pred eecccC-ceEEEe-eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeeccc-ceEEE
Q 047869 1814 LSVSSR-GRLAVG-EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYE-DCQVL 1890 (2233)
Q Consensus 1814 LSas~r-GrLAVa-EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLk-DC~VL 1890 (2233)
++.+.. ..||.+ ..+.|.|+++..--. ..+..+ ...-.-.|..++|+| ++++||.+|.. .+.|.
T Consensus 22 l~~sp~g~~las~~~D~~i~iw~~~~~~~--------~~~~~~----~~~h~~~v~~~~~sp-~g~~l~s~s~D~~v~iw 88 (345)
T 3fm0_A 22 LAWNPAGTLLASCGGDRRIRIWGTEGDSW--------ICKSVL----SEGHQRTVRKVAWSP-CGNYLASASFDATTCIW 88 (345)
T ss_dssp EEECTTSSCEEEEETTSCEEEEEEETTEE--------EEEEEE----CSSCSSCEEEEEECT-TSSEEEEEETTSCEEEE
T ss_pred EEECCCCCEEEEEcCCCeEEEEEcCCCcc--------eeeeee----ccccCCcEEEEEECC-CCCEEEEEECCCcEEEE
Confidence 444444 446654 677898988632100 000000 011123578999999 67899888754 34455
Q ss_pred EecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeCcCCCC-CCcEEEEcCCCCeeEEEEEEecCC
Q 047869 1891 TLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQDNI-SPLHYFTLPDDMIVDATLVIASRG 1968 (2233)
Q Consensus 1891 Tfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D~l-SPvyyF~LpsGkIrDaTfv~~e~G 1968 (2233)
.++... . .....+.--...|..+.|-|..+. ||....+ .|+|||+..... .....+.-..+.|..++| .++|
T Consensus 89 ~~~~~~-~--~~~~~~~~h~~~v~~v~~sp~~~~-l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~--~p~~ 162 (345)
T 3fm0_A 89 KKNQDD-F--ECVTTLEGHENEVKSVAWAPSGNL-LATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVW--HPSQ 162 (345)
T ss_dssp EECCC--E--EEEEEECCCSSCEEEEEECTTSSE-EEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEE--CSSS
T ss_pred EccCCC-e--EEEEEccCCCCCceEEEEeCCCCE-EEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEE--CCCC
Confidence 544321 1 011112222567999999998764 5555554 999999976432 223333334556776664 3556
Q ss_pred cEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccceeeEEecCCcEEEEEc
Q 047869 1969 KMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSFQDGTTLVGRL 2038 (2233)
Q Consensus 1969 ~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY~~G~Sf~a~L 2038 (2233)
. +++..|.+|.|..-++.... ... .....+ -.+.--+|-|+++-++|...-.+|+..+=..
T Consensus 163 ~-~l~s~s~d~~i~~w~~~~~~----~~~--~~~~~~--h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 163 E-LLASASYDDTVKLYREEEDD----WVC--CATLEG--HESTVWSLAFDPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp S-CEEEEETTSCEEEEEEETTE----EEE--EEEECC--CSSCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred C-EEEEEeCCCcEEEEEecCCC----EEE--EEEecC--CCCceEEEEECCCCCEEEEEeCCCeEEEecc
Confidence 4 67788899998877665211 000 001111 1233457889998888888788888776543
No 77
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.66 E-value=1.1 Score=49.55 Aligned_cols=166 Identities=13% Similarity=0.166 Sum_probs=98.4
Q ss_pred EEEEeecccCccceEEeecccc--eEEEEecCCCceeeeeeeeec---------cCCceEEEeEEecCCCceEEEEe--c
Q 047869 1865 EIVHLAFNSIVENYLTVAGYED--CQVLTLNPRGEVTDRLAIELA---------LQGAYIRRVDWVPGSPVQLMVVT--N 1931 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGLkD--C~VLTfss~GeV~DRL~LeL~---------Leg~fIIKa~WLPGSQt~LAVVT--~ 1931 (2233)
....+++ ++++|+|+++.+ ..++.++..|.+......... ..+.++..+.|-|..+. |+++. .
T Consensus 101 ~p~~~~~---dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~-l~~~~~~~ 176 (361)
T 3scy_A 101 DPCYLTT---NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKY-LLADDLGT 176 (361)
T ss_dssp CEEEEEE---CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSE-EEEEETTT
T ss_pred CcEEEEE---CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCE-EEEEeCCC
Confidence 3445666 788999998765 677777777765433221110 11445677899998765 44443 4
Q ss_pred CeEEEEeCcCCC-------CCCc---EEEEcCCCC-eeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceee
Q 047869 1932 KFVKIYDLSQDN-------ISPL---HYFTLPDDM-IVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEI 2000 (2233)
Q Consensus 1932 ~FVKIYDLS~D~-------lSPv---yyF~LpsGk-IrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEv 2000 (2233)
+.|+|||+..+. +.+. -.+.++.|. .+.. .+.++|+...+.....|.|+.-++. .+ . +...
T Consensus 177 ~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~spdg~~l~v~~~~~~~v~v~~~~-~g---~--~~~~ 248 (361)
T 3scy_A 177 DQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHL--IFNSDGKFAYLINEIGGTVIAFRYA-DG---M--LDEI 248 (361)
T ss_dssp TEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEE--EECTTSSEEEEEETTTCEEEEEEEE-TT---E--EEEE
T ss_pred CEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEE--EEcCCCCEEEEEcCCCCeEEEEEec-CC---c--eEEe
Confidence 689999998765 3332 355566554 4443 4467887544444468888877776 21 1 1111
Q ss_pred eecccccc-cCCeEEEEeccccceeeEEecC--CcEEEEEcCCCc
Q 047869 2001 IQFNDREI-HAKGLSLYFSSTYKLLFLSFQD--GTTLVGRLSPNA 2042 (2233)
Q Consensus 2001 vq~~~~q~-~~~GVSVyYS~tl~LLF~SY~~--G~Sf~a~Ls~~~ 2042 (2233)
...+.... ..+--.+.+|++-+.|+++-.. ++..+-.++...
T Consensus 249 ~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~ 293 (361)
T 3scy_A 249 QTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETN 293 (361)
T ss_dssp EEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTT
T ss_pred EEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCC
Confidence 11111111 1223478899999999988776 555555565443
No 78
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=96.66 E-value=0.25 Score=64.01 Aligned_cols=158 Identities=15% Similarity=0.120 Sum_probs=106.3
Q ss_pred ceEEEEeecccCccceEEeecccceEEEEec-CCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEec-CeEEEEeCc
Q 047869 1863 RFEIVHLAFNSIVENYLTVAGYEDCQVLTLN-PRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTN-KFVKIYDLS 1940 (2233)
Q Consensus 1863 pFeVlsLafNP~nEdyLAVcGLkDC~VLTfs-s~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~-~FVKIYDLS 1940 (2233)
.-.|..++|+| ++++||++|. |..|..++ .+|+..-. +.-...-|..+.|-|..+. ||..+. ..|+|||+.
T Consensus 615 ~~~v~~~~~s~-~~~~l~s~~~-d~~i~vw~~~~~~~~~~----~~~h~~~v~~~~~s~~~~~-l~s~~~d~~v~vwd~~ 687 (1249)
T 3sfz_A 615 TDAVYHACFSQ-DGQRIASCGA-DKTLQVFKAETGEKLLD----IKAHEDEVLCCAFSSDDSY-IATCSADKKVKIWDSA 687 (1249)
T ss_dssp SSCEEEEEECT-TSSEEEEEET-TSCEEEEETTTCCEEEE----ECCCSSCEEEEEECTTSSE-EEEEETTSEEEEEETT
T ss_pred cccEEEEEECC-CCCEEEEEeC-CCeEEEEECCCCCEEEE----eccCCCCEEEEEEecCCCE-EEEEeCCCeEEEEECC
Confidence 34688999999 7889988874 33444443 23333222 2223567999999998765 665555 489999997
Q ss_pred CCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccc
Q 047869 1941 QDNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSST 2020 (2233)
Q Consensus 1941 ~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~t 2020 (2233)
.. .+...|.-..+.|..+.|.... ...+++.-+.+|.|+.-++.... .... ..+ -.+.-.++.++++
T Consensus 688 ~~--~~~~~~~~~~~~v~~~~~~~~~-~~~~l~sg~~d~~v~vwd~~~~~------~~~~--~~~--h~~~v~~~~~sp~ 754 (1249)
T 3sfz_A 688 TG--KLVHTYDEHSEQVNCCHFTNKS-NHLLLATGSNDFFLKLWDLNQKE------CRNT--MFG--HTNSVNHCRFSPD 754 (1249)
T ss_dssp TC--CEEEEEECCSSCEEEEEECSSS-SCCEEEEEETTSCEEEEETTSSS------EEEE--ECC--CSSCEEEEEECSS
T ss_pred CC--ceEEEEcCCCCcEEEEEEecCC-CceEEEEEeCCCeEEEEECCCcc------hhhe--ecC--CCCCEEEEEEecC
Confidence 54 5777888888888888765432 34577788899999988776321 0000 111 1233457889999
Q ss_pred cceeeEEecCCcEEEEEcCC
Q 047869 2021 YKLLFLSFQDGTTLVGRLSP 2040 (2233)
Q Consensus 2021 l~LLF~SY~~G~Sf~a~Ls~ 2040 (2233)
-+.|.....+|+..+-.+..
T Consensus 755 ~~~l~s~s~dg~v~vwd~~~ 774 (1249)
T 3sfz_A 755 DELLASCSADGTLRLWDVRS 774 (1249)
T ss_dssp TTEEEEEESSSEEEEEEGGG
T ss_pred CCEEEEEECCCeEEEEeCCC
Confidence 99999999999887766643
No 79
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.64 E-value=0.088 Score=57.00 Aligned_cols=200 Identities=12% Similarity=0.147 Sum_probs=112.0
Q ss_pred eecccCc-eEEEeeCC----eEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecc--cc
Q 047869 1814 LSVSSRG-RLAVGEGD----KVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGY--ED 1886 (2233)
Q Consensus 1814 LSas~rG-rLAVaEgd----KVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGL--kD 1886 (2233)
++.+..| ++++..++ .|.++++..- ..+...+. +.....++++| ++++|+|++. ..
T Consensus 89 ~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~-----------~~~~~~~~-----~~~~~~~~~sp-dg~~l~~~~~~~~~ 151 (331)
T 3u4y_A 89 VDITPDDQFAVTVTGLNHPFNMQSYSFLKN-----------KFISTIPI-----PYDAVGIAISP-NGNGLILIDRSSAN 151 (331)
T ss_dssp EEECTTSSEEEECCCSSSSCEEEEEETTTT-----------EEEEEEEC-----CTTEEEEEECT-TSSCEEEEEETTTT
T ss_pred eEECCCCCEEEEecCCCCcccEEEEECCCC-----------CeEEEEEC-----CCCccceEECC-CCCEEEEEecCCCc
Confidence 5555554 46665444 8999987421 00111112 22336899999 5566777755 45
Q ss_pred -eEEEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEe--cCeEEEEeCcCCCC-CCcEEEEcCCCCeeEEEE
Q 047869 1887 -CQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVT--NKFVKIYDLSQDNI-SPLHYFTLPDDMIVDATL 1962 (2233)
Q Consensus 1887 -C~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT--~~FVKIYDLS~D~l-SPvyyF~LpsGkIrDaTf 1962 (2233)
+.++.++++|.+.+.- ......+.....+.|-|..+. |.++. ...|+|||+..... .+...+.. .+.+.+.+
T Consensus 152 ~i~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~spdg~~-l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~-~~~~~~~~- 227 (331)
T 3u4y_A 152 TVRRFKIDADGVLFDTG-QEFISGGTRPFNITFTPDGNF-AFVANLIGNSIGILETQNPENITLLNAVGT-NNLPGTIV- 227 (331)
T ss_dssp EEEEEEECTTCCEEEEE-EEEECSSSSEEEEEECTTSSE-EEEEETTTTEEEEEECSSTTSCEEEEEEEC-SSCCCCEE-
T ss_pred eEEEEEECCCCcEeecC-CccccCCCCccceEECCCCCE-EEEEeCCCCeEEEEECCCCcccceeeeccC-CCCCceEE-
Confidence 8899999999888764 332234666888999998765 44444 45799999976554 11333332 23444444
Q ss_pred EEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecc---cccccCCeEEEEeccccceeeEEecCC-cEEEEEc
Q 047869 1963 VIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFN---DREIHAKGLSLYFSSTYKLLFLSFQDG-TTLVGRL 2038 (2233)
Q Consensus 1963 v~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~---~~q~~~~GVSVyYS~tl~LLF~SY~~G-~Sf~a~L 2038 (2233)
+.++|+...+....+|.|+.-++.. +.....+.+... ........-.+-+|++-+.||++-.++ +..+-.+
T Consensus 228 -~spdg~~l~v~~~~~~~i~~~d~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~ 302 (331)
T 3u4y_A 228 -VSRDGSTVYVLTESTVDVFNFNQLS----GTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTI 302 (331)
T ss_dssp -ECTTSSEEEEECSSEEEEEEEETTT----TEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEET
T ss_pred -ECCCCCEEEEEEcCCCEEEEEECCC----CceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEe
Confidence 3577875444444567777755431 111111111100 001111113368899999998887654 4445455
Q ss_pred C
Q 047869 2039 S 2039 (2233)
Q Consensus 2039 s 2039 (2233)
+
T Consensus 303 ~ 303 (331)
T 3u4y_A 303 S 303 (331)
T ss_dssp T
T ss_pred c
Confidence 3
No 80
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=96.64 E-value=0.9 Score=48.00 Aligned_cols=128 Identities=13% Similarity=0.092 Sum_probs=85.1
Q ss_pred CceEEEeEEecCCCceEEEEecC-eEEEEeCcCCCCC--CcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEe
Q 047869 1910 GAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQDNIS--PLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLEL 1986 (2233)
Q Consensus 1910 g~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D~lS--PvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qel 1986 (2233)
..-|..+.|-|..+ .||..+.+ .|+|||+...... +...+.-..+.|..++|-...+|. +++..+.+|.|+.-++
T Consensus 11 ~~~v~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~-~l~s~~~dg~v~vwd~ 88 (351)
T 3f3f_A 11 DDLVHDVVYDFYGR-HVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGR-IIASASYDKTVKLWEE 88 (351)
T ss_dssp SSCEEEEEECSSSS-EEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCS-EEEEEETTSCEEEEEE
T ss_pred ccceeEEEEcCCCC-EEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCC-EEEEEcCCCeEEEEec
Confidence 45699999999765 47767665 7999999876543 445555567789888865432464 6778889999999888
Q ss_pred cccCCCcccc-ceeeeecccccccCCeEEEEeccc--cceeeEEecCCcEEEEEcCCC
Q 047869 1987 SVEGNVGATP-LKEIIQFNDREIHAKGLSLYFSST--YKLLFLSFQDGTTLVGRLSPN 2041 (2233)
Q Consensus 1987 s~s~d~g~~~-ltEvvq~~~~q~~~~GVSVyYS~t--l~LLF~SY~~G~Sf~a~Ls~~ 2041 (2233)
.......... ......... -.+.-.++.+++. -++|.....+|+..+-.+...
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~ 144 (351)
T 3f3f_A 89 DPDQEECSGRRWNKLCTLND--SKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEP 144 (351)
T ss_dssp CTTSCTTSSCSEEEEEEECC--CSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSST
T ss_pred CCCcccccccCcceeeeecc--cCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCCh
Confidence 7432211110 011111111 1344567889998 888888889998888776543
No 81
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.61 E-value=0.88 Score=51.25 Aligned_cols=119 Identities=11% Similarity=0.080 Sum_probs=70.9
Q ss_pred ccceEEEEeecccCccceEEeecccc--eEEEEecCCCceeeeeee-eeccCCceEEEeEEecCCCceEEEEec-CeEEE
Q 047869 1861 IVRFEIVHLAFNSIVENYLTVAGYED--CQVLTLNPRGEVTDRLAI-ELALQGAYIRRVDWVPGSPVQLMVVTN-KFVKI 1936 (2233)
Q Consensus 1861 ~VpFeVlsLafNP~nEdyLAVcGLkD--C~VLTfss~GeV~DRL~L-eL~Leg~fIIKa~WLPGSQt~LAVVT~-~FVKI 1936 (2233)
+.+..+..++++| +..+++.|-.+ +.++.+. .|+....... .+.-....|..+.|-|+.+ .++.... ..|++
T Consensus 120 ~~~~~~~~~~~s~--~~~~~~~~~~~~~i~~~d~~-~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~s~~~d~~v~~ 195 (433)
T 3bws_A 120 KTGFQPKSVRFID--NTRLAIPLLEDEGMDVLDIN-SGQTVRLSPPEKYKKKLGFVETISIPEHNE-LWVSQMQANAVHV 195 (433)
T ss_dssp ECSSCBCCCEESS--SSEEEEEBTTSSSEEEEETT-TCCEEEECCCHHHHTTCCEEEEEEEGGGTE-EEEEEGGGTEEEE
T ss_pred cCCCCceEEEEeC--CCeEEEEeCCCCeEEEEECC-CCeEeeecCcccccccCCceeEEEEcCCCE-EEEEECCCCEEEE
Confidence 3344556899999 45555666555 5555442 3555432222 1112255788999977653 3433333 59999
Q ss_pred EeCcCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEec
Q 047869 1937 YDLSQDNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELS 1987 (2233)
Q Consensus 1937 YDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels 1987 (2233)
||+... .+...+....+.+...+| .++|...++.-+.+|.|+.-++.
T Consensus 196 ~d~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~i~~~d~~ 242 (433)
T 3bws_A 196 FDLKTL--AYKATVDLTGKWSKILLY--DPIRDLVYCSNWISEDISVIDRK 242 (433)
T ss_dssp EETTTC--CEEEEEECSSSSEEEEEE--ETTTTEEEEEETTTTEEEEEETT
T ss_pred EECCCc--eEEEEEcCCCCCeeEEEE--cCCCCEEEEEecCCCcEEEEECC
Confidence 999643 455555555556766654 46676555555578999887764
No 82
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.57 E-value=0.97 Score=51.65 Aligned_cols=104 Identities=13% Similarity=0.184 Sum_probs=71.8
Q ss_pred ccceEEeecccceEEEEec-CCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeCcCCCCCCcEEEEc
Q 047869 1875 VENYLTVAGYEDCQVLTLN-PRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQDNISPLHYFTL 1952 (2233)
Q Consensus 1875 nEdyLAVcGLkDC~VLTfs-s~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D~lSPvyyF~L 1952 (2233)
++++||.++ .|..|..++ ..|+..-. +.-....|..+.|.|+. .|+..+.+ .|+|||+... .+...|.-
T Consensus 131 ~~~~l~sgs-~dg~i~vwd~~~~~~~~~----~~~h~~~V~~l~~~~~~--~l~s~s~dg~i~vwd~~~~--~~~~~~~~ 201 (464)
T 3v7d_B 131 EDNYVITGA-DDKMIRVYDSINKKFLLQ----LSGHDGGVWALKYAHGG--ILVSGSTDRTVRVWDIKKG--CCTHVFEG 201 (464)
T ss_dssp ETTEEEEEE-TTSCEEEEETTTTEEEEE----ECCCSSCEEEEEECSTT--EEEEEETTSCEEEEETTTT--EEEEEECC
T ss_pred CCCEEEEEc-CCCcEEEEECCCCcEEEE----EeCCCcCEEEEEEcCCC--EEEEEeCCCCEEEEECCCC--cEEEEECC
Confidence 356666655 455555554 33433222 22235679999999887 56666655 8999999754 36667776
Q ss_pred CCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecc
Q 047869 1953 PDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSV 1988 (2233)
Q Consensus 1953 psGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~ 1988 (2233)
..+.|....+...++| .+++..+.+|.|+.-++..
T Consensus 202 h~~~v~~l~~~~~~~~-~~l~s~s~d~~i~vwd~~~ 236 (464)
T 3v7d_B 202 HNSTVRCLDIVEYKNI-KYIVTGSRDNTLHVWKLPK 236 (464)
T ss_dssp CSSCEEEEEEEESSSC-EEEEEEETTSCEEEEECCC
T ss_pred CCCccEEEEEecCCCC-CEEEEEcCCCcEEEeeCCC
Confidence 7888999988765555 5888899999999888873
No 83
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.56 E-value=1.4 Score=50.53 Aligned_cols=177 Identities=11% Similarity=0.163 Sum_probs=100.1
Q ss_pred CceEEEe-eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeeccc-ceEEEEecCCC
Q 047869 1819 RGRLAVG-EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYE-DCQVLTLNPRG 1896 (2233)
Q Consensus 1819 rGrLAVa-EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLk-DC~VLTfss~G 1896 (2233)
++.+|.+ ..+.|.|+++...-.. .+++ .-.-.|..+++ ++++||++|.. .+.|..+. .|
T Consensus 143 ~~~l~~g~~dg~i~iwd~~~~~~~----------~~~~-----~h~~~v~~l~~---~~~~l~sg~~dg~i~vwd~~-~~ 203 (435)
T 1p22_A 143 DQKIVSGLRDNTIKIWDKNTLECK----------RILT-----GHTGSVLCLQY---DERVIITGSSDSTVRVWDVN-TG 203 (435)
T ss_dssp SSEEEEEESSSCEEEEESSSCCEE----------EEEC-----CCSSCEEEEEC---CSSEEEEEETTSCEEEEESS-SC
T ss_pred CCEEEEEeCCCeEEEEeCCCCeEE----------EEEc-----CCCCcEEEEEE---CCCEEEEEcCCCeEEEEECC-CC
Confidence 4455654 7889999987431111 1111 11225677887 66777776654 34455443 34
Q ss_pred ceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeCcCCCCCC-cEEEEcCCCCeeEEEEEEecCCcEEEEE
Q 047869 1897 EVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQDNISP-LHYFTLPDDMIVDATLVIASRGKMFLIV 1974 (2233)
Q Consensus 1897 eV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D~lSP-vyyF~LpsGkIrDaTfv~~e~G~~~ILV 1974 (2233)
+....+ .-....|..+.|-++ .++..+.+ .|+|||+....... ...+.-..+.|...++ +|. ++++
T Consensus 204 ~~~~~~----~~h~~~v~~l~~~~~---~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~----~~~-~l~s 271 (435)
T 1p22_A 204 EMLNTL----IHHCEAVLHLRFNNG---MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF----DDK-YIVS 271 (435)
T ss_dssp CEEEEE----CCCCSCEEEEECCTT---EEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE----ETT-EEEE
T ss_pred cEEEEE----cCCCCcEEEEEEcCC---EEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe----CCC-EEEE
Confidence 433322 223556888888643 56666655 99999998765432 2344445667777776 343 6788
Q ss_pred EecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccceeeEEecCCcEEEEEc
Q 047869 1975 LSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSFQDGTTLVGRL 2038 (2233)
Q Consensus 1975 LSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY~~G~Sf~a~L 2038 (2233)
.+.+|.|+.-++.... ....++ . ..+.-.++.++ -++++.+..+|+..+-.+
T Consensus 272 ~~~dg~i~vwd~~~~~------~~~~~~--~--~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~ 323 (435)
T 1p22_A 272 ASGDRTIKVWNTSTCE------FVRTLN--G--HKRGIACLQYR--DRLVVSGSSDNTIRLWDI 323 (435)
T ss_dssp EETTSEEEEEETTTCC------EEEEEE--C--CSSCEEEEEEE--TTEEEEEETTSCEEEEET
T ss_pred EeCCCeEEEEECCcCc------EEEEEc--C--CCCcEEEEEeC--CCEEEEEeCCCeEEEEEC
Confidence 8899999988776321 011111 1 11222344443 356666677777666554
No 84
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.54 E-value=1.6 Score=49.83 Aligned_cols=187 Identities=13% Similarity=0.093 Sum_probs=104.7
Q ss_pred CceEEEe-eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecccceEEEEecC-CC
Q 047869 1819 RGRLAVG-EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYEDCQVLTLNP-RG 1896 (2233)
Q Consensus 1819 rGrLAVa-EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLkDC~VLTfss-~G 1896 (2233)
++.+|.+ ..+.|.|+++..--.. .+++ .-.-.|..++|+|.+ +||+ |-.|-.|.-++- +|
T Consensus 132 ~~~l~sgs~dg~i~vwd~~~~~~~----------~~~~-----~h~~~V~~l~~~~~~--~l~s-~s~dg~i~vwd~~~~ 193 (464)
T 3v7d_B 132 DNYVITGADDKMIRVYDSINKKFL----------LQLS-----GHDGGVWALKYAHGG--ILVS-GSTDRTVRVWDIKKG 193 (464)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEE----------EEEC-----CCSSCEEEEEECSTT--EEEE-EETTSCEEEEETTTT
T ss_pred CCEEEEEcCCCcEEEEECCCCcEE----------EEEe-----CCCcCEEEEEEcCCC--EEEE-EeCCCCEEEEECCCC
Confidence 4566654 7788999987331100 1111 122357888998754 5554 444555555543 33
Q ss_pred ceeeeeeeeeccCCceEEEeEEecCC-CceEEEEecC-eEEEEeCcCCCCCCcEE------------------EEcCCCC
Q 047869 1897 EVTDRLAIELALQGAYIRRVDWVPGS-PVQLMVVTNK-FVKIYDLSQDNISPLHY------------------FTLPDDM 1956 (2233)
Q Consensus 1897 eV~DRL~LeL~Leg~fIIKa~WLPGS-Qt~LAVVT~~-FVKIYDLS~D~lSPvyy------------------F~LpsGk 1956 (2233)
+.... +.-....|..+.|.|.. ...++..+.+ .|+|||+......+... .....|.
T Consensus 194 ~~~~~----~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (464)
T 3v7d_B 194 CCTHV----FEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGH 269 (464)
T ss_dssp EEEEE----ECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCC
T ss_pred cEEEE----ECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCc
Confidence 32222 22235678888898733 3445555544 99999998776543321 1111221
Q ss_pred eeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccceeeEEecCCcEEEE
Q 047869 1957 IVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSFQDGTTLVG 2036 (2233)
Q Consensus 1957 IrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY~~G~Sf~a 2036 (2233)
...++-+ ..+|. ++++.+.+|.|+.-++.... ....... -.+.-.++.|+++-+.|+.+..+|+..+-
T Consensus 270 ~~~v~~~-~~~~~-~l~~~~~d~~i~vwd~~~~~--------~~~~~~~--~~~~v~~~~~~~~~~~l~sg~~dg~i~vw 337 (464)
T 3v7d_B 270 MASVRTV-SGHGN-IVVSGSYDNTLIVWDVAQMK--------CLYILSG--HTDRIYSTIYDHERKRCISASMDTTIRIW 337 (464)
T ss_dssp SSCEEEE-EEETT-EEEEEETTSCEEEEETTTTE--------EEEEECC--CSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred cceEEEE-cCCCC-EEEEEeCCCeEEEEECCCCc--------EEEEecC--CCCCEEEEEEcCCCCEEEEEeCCCcEEEE
Confidence 1112212 23453 67888899999988876211 0111111 13345678999999999999999988877
Q ss_pred EcC
Q 047869 2037 RLS 2039 (2233)
Q Consensus 2037 ~Ls 2039 (2233)
.+.
T Consensus 338 d~~ 340 (464)
T 3v7d_B 338 DLE 340 (464)
T ss_dssp ETT
T ss_pred ECC
Confidence 664
No 85
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=96.54 E-value=0.89 Score=51.81 Aligned_cols=155 Identities=17% Similarity=0.196 Sum_probs=97.7
Q ss_pred EEEEeecccCccceEEeecccceEEEEecCCCceeeeeeeeec--------------cCCceEEEeEEecCCCceEEEEe
Q 047869 1865 EIVHLAFNSIVENYLTVAGYEDCQVLTLNPRGEVTDRLAIELA--------------LQGAYIRRVDWVPGSPVQLMVVT 1930 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGLkDC~VLTfss~GeV~DRL~LeL~--------------Leg~fIIKa~WLPGSQt~LAVVT 1930 (2233)
.|..++|+| ++++||+.+-+.++|..+ ..|+..-++.-+.. -.+.+|..+.|-|..+. ||...
T Consensus 66 ~V~~v~fsp-dg~~la~g~~~~v~i~~~-~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~-l~s~~ 142 (393)
T 1erj_A 66 VVCCVKFSN-DGEYLATGCNKTTQVYRV-SDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKF-LATGA 142 (393)
T ss_dssp CCCEEEECT-TSSEEEEECBSCEEEEET-TTCCEEEEECC-----------------CCCCBEEEEEECTTSSE-EEEEE
T ss_pred EEEEEEECC-CCCEEEEEcCCcEEEEEe-cCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCE-EEEEc
Confidence 356889999 678999977777777776 45555444422211 01347999999998765 55555
Q ss_pred cC-eEEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeeccccccc
Q 047869 1931 NK-FVKIYDLSQDNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIH 2009 (2233)
Q Consensus 1931 ~~-FVKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~ 2009 (2233)
.+ .|+|||+... .+...+.-..+.|.+++|- ++|. +++..|.+|.++.-++.... .. ..+. ..
T Consensus 143 ~d~~i~iwd~~~~--~~~~~~~~h~~~v~~~~~~--p~~~-~l~s~s~d~~v~iwd~~~~~----~~--~~~~-----~~ 206 (393)
T 1erj_A 143 EDRLIRIWDIENR--KIVMILQGHEQDIYSLDYF--PSGD-KLVSGSGDRTVRIWDLRTGQ----CS--LTLS-----IE 206 (393)
T ss_dssp TTSCEEEEETTTT--EEEEEECCCSSCEEEEEEC--TTSS-EEEEEETTSEEEEEETTTTE----EE--EEEE-----CS
T ss_pred CCCeEEEEECCCC--cEEEEEccCCCCEEEEEEc--CCCC-EEEEecCCCcEEEEECCCCe----eE--EEEE-----cC
Confidence 44 8999998653 3444555556778877753 5665 56788899999988775211 10 0111 12
Q ss_pred CCeEEEEecc-ccceeeEEecCCcEEEEEc
Q 047869 2010 AKGLSLYFSS-TYKLLFLSFQDGTTLVGRL 2038 (2233)
Q Consensus 2010 ~~GVSVyYS~-tl~LLF~SY~~G~Sf~a~L 2038 (2233)
.+-.++-+++ .-++|...-.+|+..+-.+
T Consensus 207 ~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~ 236 (393)
T 1erj_A 207 DGVTTVAVSPGDGKYIAAGSLDRAVRVWDS 236 (393)
T ss_dssp SCEEEEEECSTTCCEEEEEETTSCEEEEET
T ss_pred CCcEEEEEECCCCCEEEEEcCCCcEEEEEC
Confidence 3345666776 5566666667777666544
No 86
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.51 E-value=0.28 Score=55.81 Aligned_cols=189 Identities=14% Similarity=0.147 Sum_probs=117.1
Q ss_pred cCceEEEe-eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecccceEEEEecC-C
Q 047869 1818 SRGRLAVG-EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYEDCQVLTLNP-R 1895 (2233)
Q Consensus 1818 ~rGrLAVa-EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLkDC~VLTfss-~ 1895 (2233)
.+.+||.+ ..+.|.|+++..--.. .+ +.. =.-.|..++|+|....+||.+|. |..|.-++- .
T Consensus 138 dg~~l~sgs~d~~i~iwd~~~~~~~----------~~---~~~--h~~~V~~~~~~~~~~~~l~s~s~-D~~v~iwd~~~ 201 (344)
T 4gqb_B 138 SGTQAVSGSKDICIKVWDLAQQVVL----------SS---YRA--HAAQVTCVAASPHKDSVFLSCSE-DNRILLWDTRC 201 (344)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEE----------EE---ECC--CSSCEEEEEECSSCTTEEEEEET-TSCEEEEETTS
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEE----------EE---EcC--cCCceEEEEecCCCCCceeeecc-ccccccccccc
Confidence 34456655 7778999987431100 01 100 12357899999987777777665 444444432 2
Q ss_pred CceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEE
Q 047869 1896 GEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQDNISPLHYFTLPDDMIVDATLVIASRGKMFLIV 1974 (2233)
Q Consensus 1896 GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILV 1974 (2233)
|+.... +.....+..+..+.|-|.....||..+.+ .|+|||+... .+...|.-..+.|..++| .++|..+++.
T Consensus 202 ~~~~~~--~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~--~~~~~~~~h~~~v~~v~f--sp~g~~~las 275 (344)
T 4gqb_B 202 PKPASQ--IGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKST--SCVLSSAVHSQCVTGLVF--SPHSVPFLAS 275 (344)
T ss_dssp SSCEEE--CC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC----CCEEEECCSSCEEEEEE--CSSSSCCEEE
T ss_pred cceeee--eecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCC--cEEEEEcCCCCCEEEEEE--ccCCCeEEEE
Confidence 332222 22223466788999999777767776655 7999999754 577888888888988775 4677677888
Q ss_pred EecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccceeeEEe-cCCcEEEEEcC
Q 047869 1975 LSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSF-QDGTTLVGRLS 2039 (2233)
Q Consensus 1975 LSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY-~~G~Sf~a~Ls 2039 (2233)
-|.+|.|+.-++... +.+...+. .+.-.+|-||++-+.|++|- .||+..+-.+.
T Consensus 276 gs~D~~i~vwd~~~~---------~~~~~~~H--~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~ 330 (344)
T 4gqb_B 276 LSEDCSLAVLDSSLS---------ELFRSQAH--RDFVRDATWSPLNHSLLTTVGWDHQVVHHVVP 330 (344)
T ss_dssp EETTSCEEEECTTCC---------EEEEECCC--SSCEEEEEECSSSTTEEEEEETTSCEEEEECC
T ss_pred EeCCCeEEEEECCCC---------cEEEEcCC--CCCEEEEEEeCCCCeEEEEEcCCCeEEEEECC
Confidence 899999998766421 11222111 23345788898877777664 47777776653
No 87
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=96.51 E-value=1.3 Score=54.48 Aligned_cols=161 Identities=11% Similarity=0.033 Sum_probs=96.1
Q ss_pred EEEEeecccCccceEEeeccc-ceEEEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEec-CeEEEEeCcCC
Q 047869 1865 EIVHLAFNSIVENYLTVAGYE-DCQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTN-KFVKIYDLSQD 1942 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGLk-DC~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~-~FVKIYDLS~D 1942 (2233)
.|..|+++|.+.++||.+|-. .+.|..++..+.......-.+.--...|..+.|-|..+. |+.... ..|+|||+...
T Consensus 384 ~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~-l~sgs~Dg~v~vwd~~~~ 462 (694)
T 3dm0_A 384 MVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQF-ALSGSWDGELRLWDLAAG 462 (694)
T ss_dssp CEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSE-EEEEETTSEEEEEETTTT
T ss_pred eeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCE-EEEEeCCCcEEEEECCCC
Confidence 467899999888999888863 455666655443322222222223567999999998765 554544 48999999754
Q ss_pred CCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEecccc-
Q 047869 1943 NISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTY- 2021 (2233)
Q Consensus 1943 ~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl- 2021 (2233)
.+...|.--.+.|.+++|- ++|. +++.-|.+|.|..-++.... ... +......-...-.++.|++.-
T Consensus 463 --~~~~~~~~h~~~v~~~~~s--~~~~-~l~s~s~D~~i~iwd~~~~~---~~~----~~~~~~~h~~~v~~~~~~~~~~ 530 (694)
T 3dm0_A 463 --VSTRRFVGHTKDVLSVAFS--LDNR-QIVSASRDRTIKLWNTLGEC---KYT----ISEGGEGHRDWVSCVRFSPNTL 530 (694)
T ss_dssp --EEEEEEECCSSCEEEEEEC--TTSS-CEEEEETTSCEEEECTTSCE---EEE----ECSSTTSCSSCEEEEEECSCSS
T ss_pred --cceeEEeCCCCCEEEEEEe--CCCC-EEEEEeCCCEEEEEECCCCc---cee----eccCCCCCCCcEEEEEEeCCCC
Confidence 3455666667788887753 5564 56778889998876543110 000 000000011223456677653
Q ss_pred -ceeeEEecCCcEEEEEc
Q 047869 2022 -KLLFLSFQDGTTLVGRL 2038 (2233)
Q Consensus 2022 -~LLF~SY~~G~Sf~a~L 2038 (2233)
..|+..-.+|+..+-.+
T Consensus 531 ~~~l~s~s~d~~v~vwd~ 548 (694)
T 3dm0_A 531 QPTIVSASWDKTVKVWNL 548 (694)
T ss_dssp SCEEEEEETTSCEEEEET
T ss_pred cceEEEEeCCCeEEEEEC
Confidence 35555556776666554
No 88
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.51 E-value=0.92 Score=48.74 Aligned_cols=127 Identities=17% Similarity=0.258 Sum_probs=81.8
Q ss_pred eeeeeeeeccC--CceEEEeEEecCCCceEEEEecC-eEEEEeCcCCCCC---CcEEEEcCCCCeeEEEEEEecCCcEEE
Q 047869 1899 TDRLAIELALQ--GAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQDNIS---PLHYFTLPDDMIVDATLVIASRGKMFL 1972 (2233)
Q Consensus 1899 ~DRL~LeL~Le--g~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D~lS---PvyyF~LpsGkIrDaTfv~~e~G~~~I 1972 (2233)
.+++.+.-.|. ...|..+.|-|.....||-...| .|||||+...... |...+.-..+.|.++.| .++|+ ++
T Consensus 25 ~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~--s~dg~-~l 101 (340)
T 4aow_A 25 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI--SSDGQ-FA 101 (340)
T ss_dssp -CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEE--CTTSS-EE
T ss_pred CCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEE--CCCCC-EE
Confidence 44555555555 46799999999865566666655 8999999887654 34444444677887775 46675 67
Q ss_pred EEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccceeeEEecCCcEEEEEc
Q 047869 1973 IVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSFQDGTTLVGRL 2038 (2233)
Q Consensus 1973 LVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY~~G~Sf~a~L 2038 (2233)
+..+.+|.++.-+....... . ...........+.+++.-+.|+..-.+|...+-.+
T Consensus 102 ~s~~~d~~i~~~~~~~~~~~------~----~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~ 157 (340)
T 4aow_A 102 LSGSWDGTLRLWDLTTGTTT------R----RFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT 157 (340)
T ss_dssp EEEETTSEEEEEETTTTEEE------E----EEECCSSCEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred EEEcccccceEEeeccccee------e----eecCCCCceeEEEEeecCccceeecCCCeEEEEEe
Confidence 78889999987766532110 0 00111334556677777777777777777766543
No 89
>3nis_A E3 ubiquitin-protein ligase UBR1; E3 ubiquitin ligase, UBR BOX, zinc-binding protein, N-END RU ligase, metal binding protein; 1.68A {Saccharomyces cerevisiae} PDB: 3nii_A 3nij_A 3nih_A 3nik_A 3nim_A 3nin_A 3nil_A 3nit_A
Probab=96.39 E-value=0.0024 Score=62.37 Aligned_cols=64 Identities=22% Similarity=0.402 Sum_probs=47.7
Q ss_pred CCcceeccCCcccccceEeeccCCCCCCceeehhhhhhh-cCCCcEEEEee---cceeeecCCCCC--CCCCce
Q 047869 1589 KVCTFTSSGSNFMEQHWYFCYTCDLTVSKGCCSVCAKVC-HRGHRVVYSRS---SRFFCDCGAGGV--RGSSCQ 1656 (2233)
Q Consensus 1589 ~~CTFt~TG~~fi~Q~~Y~C~TC~l~~~~GVC~aCA~vC-HkGHdVvyl~k---~~FfCDCGa~~~--~~~~Cq 1656 (2233)
..|...... ....|.|.||.++..-.+|..|-..- |+||++..... ....||||.... +...|+
T Consensus 9 ~~Cg~vf~~----ge~~Y~C~~C~~d~tcvlC~~CF~~s~H~gH~~~~~~s~~~~gG~CDCGD~eawk~~~fC~ 78 (82)
T 3nis_A 9 RNCGRKFKI----GEPLYRCHECGCDDTCVLCIHCFNPKDHVNHHVCTDICTEFTSGICDCGDEEAWNSPLHCK 78 (82)
T ss_dssp SCCCCBCCT----TCEEEEETTTBSSTTCCBCTTTCCGGGGTTSCEEEEECCSSEEEBCCTTCGGGBSSCCCCG
T ss_pred CCCCCcccC----CCEEEEeeccCCCCCceEchhhCCCCCcCCceEEEEEecCCCCcEecCCCHHHhCCCCCCC
Confidence 456555432 34589999999998889999998764 99999988743 679999997532 334454
No 90
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.37 E-value=0.47 Score=59.56 Aligned_cols=200 Identities=14% Similarity=0.131 Sum_probs=123.7
Q ss_pred cCceEEEe-eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCc-cceEEeeccc-ceEEEEecC
Q 047869 1818 SRGRLAVG-EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIV-ENYLTVAGYE-DCQVLTLNP 1894 (2233)
Q Consensus 1818 ~rGrLAVa-EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~n-EdyLAVcGLk-DC~VLTfss 1894 (2233)
.+..+|.+ ..+.|.|+++..- + ... +..+. .-.-.|.+|+|+|.. +++||.+|.. .+.|..+..
T Consensus 20 dg~~latg~~dg~I~vwd~~~~----~-----~~~--~~~l~--~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~ 86 (753)
T 3jro_A 20 YGKRLATCSSDKTIKIFEVEGE----T-----HKL--IDTLT--GHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEEN 86 (753)
T ss_dssp SSCCEEEEETTTEEEEEEEETT----E-----EEE--EEEEC--CCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEET
T ss_pred CCCeEEEEECCCcEEEEecCCC----C-----Ccc--ceecc--CCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCC
Confidence 34457765 7888999997521 0 000 01111 113457899998753 7888887763 355555533
Q ss_pred CCceeeeeeeeeccCCceEEEeEEecCC-CceEEEEecC-eEEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEec------
Q 047869 1895 RGEVTDRLAIELALQGAYIRRVDWVPGS-PVQLMVVTNK-FVKIYDLSQDNISPLHYFTLPDDMIVDATLVIAS------ 1966 (2233)
Q Consensus 1895 ~GeV~DRL~LeL~Leg~fIIKa~WLPGS-Qt~LAVVT~~-FVKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e------ 1966 (2233)
|... ......-....|..+.|-|.. ...+++.+.+ .|+|||+......+...+.-..+.|...++-...
T Consensus 87 -~~~~--~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~ 163 (753)
T 3jro_A 87 -GRWS--QIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE 163 (753)
T ss_dssp -TEEE--EEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC------
T ss_pred -Cccc--ccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccc
Confidence 2111 111222236679999999983 3346666654 8999999998777788877778888888865320
Q ss_pred -----CCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccc---cceeeEEecCCcEEEEEc
Q 047869 1967 -----RGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSST---YKLLFLSFQDGTTLVGRL 2038 (2233)
Q Consensus 1967 -----~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~t---l~LLF~SY~~G~Sf~a~L 2038 (2233)
+| ..+++.+.+|.|+.-++...... ......+. . -.+.-.++.|+++ -++|..+-.+|+..+-.+
T Consensus 164 ~~~~~d~-~~l~sgs~dg~I~iwd~~~~~~~--~~~~~~~~--~--h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~ 236 (753)
T 3jro_A 164 HNGTKES-RKFVTGGADNLVKIWKYNSDAQT--YVLESTLE--G--HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQ 236 (753)
T ss_dssp ---CGGG-CCEEEEETTSCEEEEEEETTTTE--EEEEEEEC--C--CSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEE
T ss_pred cccCCCC-CEEEEEECCCeEEEEeccCCccc--ceeeeeec--C--CCCcEEEEEeccCCCCCCEEEEEecCCEEEEecC
Confidence 34 47888899999999888743211 11111111 1 1233567889998 778887778888777665
Q ss_pred CC
Q 047869 2039 SP 2040 (2233)
Q Consensus 2039 s~ 2040 (2233)
..
T Consensus 237 ~~ 238 (753)
T 3jro_A 237 DN 238 (753)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 91
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.37 E-value=1.8 Score=48.35 Aligned_cols=153 Identities=15% Similarity=0.181 Sum_probs=94.6
Q ss_pred EEEEeecccCccceEEeecccceEEEEecC-CCceeeeeeeeeccCCceEEEeEEecCCCceEEEEec-CeEEEEeCcCC
Q 047869 1865 EIVHLAFNSIVENYLTVAGYEDCQVLTLNP-RGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTN-KFVKIYDLSQD 1942 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGLkDC~VLTfss-~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~-~FVKIYDLS~D 1942 (2233)
.|.++.++| +..++|.+|. |..|.-++- +|+....+ .....-+..+.|-|..+. ||..+. ..|+|||+...
T Consensus 82 ~v~~~~~~~-~~~~l~s~s~-D~~i~lWd~~~~~~~~~~----~~~~~~~~~~~~spdg~~-l~~g~~dg~v~i~~~~~~ 154 (321)
T 3ow8_A 82 GVVSVDISH-TLPIAASSSL-DAHIRLWDLENGKQIKSI----DAGPVDAWTLAFSPDSQY-LATGTHVGKVNIFGVESG 154 (321)
T ss_dssp CEEEEEECS-SSSEEEEEET-TSEEEEEETTTTEEEEEE----ECCTTCCCCEEECTTSSE-EEEECTTSEEEEEETTTC
T ss_pred CEEEEEECC-CCCEEEEEeC-CCcEEEEECCCCCEEEEE----eCCCccEEEEEECCCCCE-EEEEcCCCcEEEEEcCCC
Confidence 477888988 4556666554 445555543 34333222 122334667889998875 555554 48999999755
Q ss_pred CCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccc
Q 047869 1943 NISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYK 2022 (2233)
Q Consensus 1943 ~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~ 2022 (2233)
. +.+.+.-..+.|..++| .++|+ +++.-+.+|.|+.-++.... ....+ ... ...--++-|+++-+
T Consensus 155 ~--~~~~~~~~~~~v~~~~~--spdg~-~lasg~~dg~i~iwd~~~~~------~~~~~--~~h--~~~v~~l~~spd~~ 219 (321)
T 3ow8_A 155 K--KEYSLDTRGKFILSIAY--SPDGK-YLASGAIDGIINIFDIATGK------LLHTL--EGH--AMPIRSLTFSPDSQ 219 (321)
T ss_dssp S--EEEEEECSSSCEEEEEE--CTTSS-EEEEEETTSCEEEEETTTTE------EEEEE--CCC--SSCCCEEEECTTSC
T ss_pred c--eeEEecCCCceEEEEEE--CCCCC-EEEEEcCCCeEEEEECCCCc------EEEEE--ccc--CCceeEEEEcCCCC
Confidence 3 45555555666776664 46775 67788899999988876211 01111 111 11234678899888
Q ss_pred eeeEEecCCcEEEEEcC
Q 047869 2023 LLFLSFQDGTTLVGRLS 2039 (2233)
Q Consensus 2023 LLF~SY~~G~Sf~a~Ls 2039 (2233)
+|+..-.+|+..+-.+.
T Consensus 220 ~l~s~s~dg~i~iwd~~ 236 (321)
T 3ow8_A 220 LLVTASDDGYIKIYDVQ 236 (321)
T ss_dssp EEEEECTTSCEEEEETT
T ss_pred EEEEEcCCCeEEEEECC
Confidence 88888888887776653
No 92
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=96.32 E-value=1.1 Score=52.87 Aligned_cols=157 Identities=17% Similarity=0.160 Sum_probs=88.0
Q ss_pred cCceEEE----e-eCCeEEEEechhhhcccccCCcccccc-ccccccccccceEEEEeecccCccceEEeeccc-ceEEE
Q 047869 1818 SRGRLAV----G-EGDKVAIFDVGQLIGQATIQPVTADKT-NVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYE-DCQVL 1890 (2233)
Q Consensus 1818 ~rGrLAV----a-EgdKVTILqlsaLLkQad~s~~skdKl-TLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLk-DC~VL 1890 (2233)
.+.+||| + ..+.|.|+++......... ..+.+ .+..+.. -.-.|.+|+|||.++++||.++.. .+.|.
T Consensus 103 dg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~---~~~~~~~~~~~~~--h~~~V~~v~~~p~~~~~las~s~Dg~v~iw 177 (434)
T 2oit_A 103 DNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQ---QKRPFAYHKLLKD--AGGMVIDMKWNPTVPSMVAVCLADGSIAVL 177 (434)
T ss_dssp TSCEEEEEEEETTTEEEEEEEEHHHHHCTTCS---SCCCSEEEECCCS--GGGSEEEEEECSSCTTEEEEEETTSCEEEE
T ss_pred CCCEEEEEEeccCCCceEEEEEccccccCCcC---CcceeeeeeccCC--CCCceEEEEECCCCCCEEEEEECCCeEEEE
Confidence 3455775 2 5678999999765321110 00000 1111111 134588999999888999987763 34455
Q ss_pred EecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeCcCCCCCCcEEEEcCCC-------CeeEEEE
Q 047869 1891 TLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQDNISPLHYFTLPDD-------MIVDATL 1962 (2233)
Q Consensus 1891 Tfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D~lSPvyyF~LpsG-------kIrDaTf 1962 (2233)
-+... .. .....-.+..|..+.|-|..+ .||+.+.+ .|+|||+. -.+...+..+.. .|...++
T Consensus 178 D~~~~-~~----~~~~~~~~~~v~~v~wspdg~-~lasgs~dg~v~iwd~~---~~~~~~~~~~~~~~~~~~~~v~~v~w 248 (434)
T 2oit_A 178 QVTET-VK----VCATLPSTVAVTSVCWSPKGK-QLAVGKQNGTVVQYLPT---LQEKKVIPCPPFYESDHPVRVLDVLW 248 (434)
T ss_dssp EESSS-EE----EEEEECGGGCEEEEEECTTSS-CEEEEETTSCEEEECTT---CCEEEEECCCTTCCTTSCEEEEEEEE
T ss_pred EcCCC-cc----eeeccCCCCceeEEEEcCCCC-EEEEEcCCCcEEEEccC---CcccccccCCcccCCCCceeEEEEEE
Confidence 44332 11 111111256799999999855 47777666 99999987 234555555432 4444443
Q ss_pred EEecCCcEEEEEEecCCc------eEEEEecccC
Q 047869 1963 VIASRGKMFLIVLSECGS------LYRLELSVEG 1990 (2233)
Q Consensus 1963 v~~e~G~~~ILVLSS~G~------LY~Qels~s~ 1990 (2233)
..++.+.+...+.+|. +++..+.+..
T Consensus 249 --~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~ 280 (434)
T 2oit_A 249 --IGTYVFAIVYAAADGTLETSPDVVMALLPKKE 280 (434)
T ss_dssp --EETTEEEEEEEETTCCSSSCCEEEEEECCCTT
T ss_pred --ecCceEEEEEccCCCccCCCCceEEEEeccCC
Confidence 3455433333444443 6777787543
No 93
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=96.29 E-value=1.1 Score=49.43 Aligned_cols=119 Identities=14% Similarity=0.149 Sum_probs=79.5
Q ss_pred EEEEeecccCccceEEeeccc-ceEEEEecCCCceeeeeeeeeccCCceEEEeEEecC-CCceEEEEecC-eEEEEeCcC
Q 047869 1865 EIVHLAFNSIVENYLTVAGYE-DCQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPG-SPVQLMVVTNK-FVKIYDLSQ 1941 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGLk-DC~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPG-SQt~LAVVT~~-FVKIYDLS~ 1941 (2233)
.|..++|+| ++++||.+|.. .+.|.-+...+.. ..-.+.--...|..+.|-|. ....||....+ .|+|||+..
T Consensus 15 ~V~~v~~s~-~g~~lasgs~D~~v~lwd~~~~~~~---~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~ 90 (316)
T 3bg1_A 15 MIHDAQMDY-YGTRLATCSSDRSVKIFDVRNGGQI---LIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREEN 90 (316)
T ss_dssp CEEEEEECG-GGCEEEEEETTTEEEEEEEETTEEE---EEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSS
T ss_pred eEEEeeEcC-CCCEEEEEeCCCeEEEEEecCCCcE---EEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCC
Confidence 477899998 78899988854 3555555433211 11112112557999999863 23356655554 899999987
Q ss_pred CCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecc
Q 047869 1942 DNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSV 1988 (2233)
Q Consensus 1942 D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~ 1988 (2233)
....+.+.+.-..+.|..++|-.+..| .+++.-|.+|.|+.-++..
T Consensus 91 ~~~~~~~~~~~h~~~V~~v~~~p~~~g-~~lasgs~D~~i~lwd~~~ 136 (316)
T 3bg1_A 91 GTWEKSHEHAGHDSSVNSVCWAPHDYG-LILACGSSDGAISLLTYTG 136 (316)
T ss_dssp SCCCEEEEECCCSSCCCEEEECCTTTC-SCEEEECSSSCEEEEEECS
T ss_pred CcceEEEEccCCCCceEEEEECCCCCC-cEEEEEcCCCCEEEEecCC
Confidence 666677776666778998887644335 4677888999999877763
No 94
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=96.24 E-value=0.72 Score=51.86 Aligned_cols=170 Identities=14% Similarity=0.207 Sum_probs=103.9
Q ss_pred eEEEEeecccCccceEEeecccceEEEEecCC--Cceeeeeeeeec-c--CCceEEEeEEecCCCceEEEEecC-eEEEE
Q 047869 1864 FEIVHLAFNSIVENYLTVAGYEDCQVLTLNPR--GEVTDRLAIELA-L--QGAYIRRVDWVPGSPVQLMVVTNK-FVKIY 1937 (2233)
Q Consensus 1864 FeVlsLafNP~nEdyLAVcGLkDC~VLTfss~--GeV~DRL~LeL~-L--eg~fIIKa~WLPGSQt~LAVVT~~-FVKIY 1937 (2233)
-.|.+++|+| ++++||.+ .|-.|.-++-+ +....-+.+++. + ....|..+.|-|.....||..+.+ .|+||
T Consensus 178 ~~v~~~~~~~-~~~~l~s~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iw 254 (447)
T 3dw8_B 178 YHINSISINS-DYETYLSA--DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLC 254 (447)
T ss_dssp SCCCEEEECT-TSSEEEEE--CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEE
T ss_pred cceEEEEEcC-CCCEEEEe--CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEE
Confidence 4577899999 67888875 56666666554 433333333332 2 266799999999875567777766 79999
Q ss_pred eCcCCCCC--CcEEEEcCCC------------CeeEEEEEEecCCcEEEEEEecCCceEEEEecccCC-Cccccceeeee
Q 047869 1938 DLSQDNIS--PLHYFTLPDD------------MIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGN-VGATPLKEIIQ 2002 (2233)
Q Consensus 1938 DLS~D~lS--PvyyF~LpsG------------kIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d-~g~~~ltEvvq 2002 (2233)
|+...... +...|.-..+ .|..++| .++|+ +++..+. |.|+.-++...+. ...+...+.+.
T Consensus 255 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--s~~g~-~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~ 330 (447)
T 3dw8_B 255 DMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKF--SHSGR-YMMTRDY-LSVKVWDLNMENRPVETYQVHEYLR 330 (447)
T ss_dssp ETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEE--CTTSS-EEEEEES-SEEEEEETTCCSSCSCCEESCGGGT
T ss_pred ECcCCccccceeeEeccCCCccccccccccCceEEEEEE--CCCCC-EEEEeeC-CeEEEEeCCCCccccceeecccccc
Confidence 99876643 3566766665 7877775 35775 4555666 9999988874221 11110000000
Q ss_pred c-----ccccccCCeEEEEeccccceeeEEecCCcEEEEEcCC
Q 047869 2003 F-----NDREIHAKGLSLYFSSTYKLLFLSFQDGTTLVGRLSP 2040 (2233)
Q Consensus 2003 ~-----~~~q~~~~GVSVyYS~tl~LLF~SY~~G~Sf~a~Ls~ 2040 (2233)
. .....-..-.++-+|++-+.|+..-.+|+..+-.+..
T Consensus 331 ~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~ 373 (447)
T 3dw8_B 331 SKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNT 373 (447)
T ss_dssp TTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTT
T ss_pred ccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCC
Confidence 0 0000000122478899988888888888888877644
No 95
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=96.18 E-value=3.6 Score=50.02 Aligned_cols=283 Identities=13% Similarity=0.141 Sum_probs=152.6
Q ss_pred eecccCc-eEEEe-eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecccc---eE
Q 047869 1814 LSVSSRG-RLAVG-EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYED---CQ 1888 (2233)
Q Consensus 1814 LSas~rG-rLAVa-EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLkD---C~ 1888 (2233)
++.++.| +||.+ ..+.|-|+++..- . ..-+.+++.. .-.|.+|+|+| ++++||++|-.+ ..
T Consensus 65 ~~~spdg~~lasg~~d~~v~lWd~~~~----~----~~~~~~~~~~-----~~~v~~v~fs~-dg~~l~~~~~~~~~~~~ 130 (611)
T 1nr0_A 65 AKTSPSGYYCASGDVHGNVRIWDTTQT----T----HILKTTIPVF-----SGPVKDISWDS-ESKRIAAVGEGRERFGH 130 (611)
T ss_dssp EEECTTSSEEEEEETTSEEEEEESSST----T----CCEEEEEECS-----SSCEEEEEECT-TSCEEEEEECCSSCSEE
T ss_pred EEECCCCcEEEEEeCCCCEEEeECCCC----c----ceeeEeeccc-----CCceEEEEECC-CCCEEEEEECCCCceeE
Confidence 4445544 57765 7788999997311 0 0011122211 12588999999 678888888643 46
Q ss_pred EEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEecC
Q 047869 1889 VLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQDNISPLHYFTLPDDMIVDATLVIASR 1967 (2233)
Q Consensus 1889 VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~ 1967 (2233)
|..++. |+... .+.-....|..+.|-|..+..||....+ .|+|||+.. ......|.--.+.|..++| .++
T Consensus 131 v~~wd~-~~~~~----~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~--~~~~~~l~~H~~~V~~v~f--spd 201 (611)
T 1nr0_A 131 VFLFDT-GTSNG----NLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPP--FKFKSTFGEHTKFVHSVRY--NPD 201 (611)
T ss_dssp EEETTT-CCBCB----CCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTT--BEEEEEECCCSSCEEEEEE--CTT
T ss_pred EEEeeC-CCCcc----eecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCC--CeEeeeeccccCceEEEEE--CCC
Confidence 666653 33211 1111256799999999987778777666 899999643 2233444444567877775 467
Q ss_pred CcEEEEEEecCCceEEEEecccCCCccccc-eeeeecccccccCCeEEEEeccccceeeEEecCCcEEEEEcCCCccccc
Q 047869 1968 GKMFLIVLSECGSLYRLELSVEGNVGATPL-KEIIQFNDREIHAKGLSLYFSSTYKLLFLSFQDGTTLVGRLSPNAASLS 2046 (2233)
Q Consensus 1968 G~~~ILVLSS~G~LY~Qels~s~d~g~~~l-tEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY~~G~Sf~a~Ls~~~~sv~ 2046 (2233)
|+ +++.-|.+|.|..-++...... ..+ ...+. ...-.+.-.++-||++-+.|.-+-.+|+..+=.+....
T Consensus 202 g~-~las~s~D~~i~lwd~~~g~~~--~~~~~~~~~--~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~---- 272 (611)
T 1nr0_A 202 GS-LFASTGGDGTIVLYNGVDGTKT--GVFEDDSLK--NVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLK---- 272 (611)
T ss_dssp SS-EEEEEETTSCEEEEETTTCCEE--EECBCTTSS--SCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE----
T ss_pred CC-EEEEEECCCcEEEEECCCCcEe--eeecccccc--ccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCc----
Confidence 75 6777889999998776421100 000 00000 00112345678899988888777778877766553221
Q ss_pred ceeEEEEccCCCCCCCcccceeeccCCCceEEEEeccCCCceEEEEecCCceeeeccccccCCCCCeEEEEEeecCCCCC
Q 047869 2047 EVSYVFEEQDGKLRSAGLHRWKELLASSGLFFCFSSLKSNAAVAVSLGTNELIAQNMRHAAGSTSPLVGVTAYKPLSKDK 2126 (2233)
Q Consensus 2047 eis~Vfe~~~gk~~~a~L~qWsEV~~hPGLf~cls~~~sn~pvvv~l~pd~I~iQeiK~~~~sSs~vdgva~y~p~s~~r 2126 (2233)
.+.+ +....... -..+.-...+ ..+++.+. .+..-+.-....+ ..+.++ +-...+..++. +.+.
T Consensus 273 ~~~~-~~~~~~~~----~~~~~~~~~~-~~l~s~s~--d~~i~~~~~~~~~-~~~~~~---gh~~~v~~l~~----spdg 336 (611)
T 1nr0_A 273 VEKT-IPVGTRIE----DQQLGIIWTK-QALVSISA--NGFINFVNPELGS-IDQVRY---GHNKAITALSS----SADG 336 (611)
T ss_dssp EEEE-EECCSSGG----GCEEEEEECS-SCEEEEET--TCCEEEEETTTTE-EEEEEC---CCSSCEEEEEE----CTTS
T ss_pred eeee-ecCCCCcc----ceeEEEEEcC-CEEEEEeC--CCcEEEEeCCCCC-cceEEc---CCCCCEEEEEE----eCCC
Confidence 1111 11110000 1111111222 33344343 3443333333322 222221 22344555554 3355
Q ss_pred eEEEEEeeCCceeEEecc
Q 047869 2127 VHCLVLHDDGSLQIYSHV 2144 (2233)
Q Consensus 2127 ttlLLLcEDGSLrIYsa~ 2144 (2233)
..++.-.+||.+++|...
T Consensus 337 ~~l~s~s~D~~v~~Wd~~ 354 (611)
T 1nr0_A 337 KTLFSADAEGHINSWDIS 354 (611)
T ss_dssp SEEEEEETTSCEEEEETT
T ss_pred CEEEEEeCCCcEEEEECC
Confidence 567777889999999853
No 96
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.16 E-value=0.98 Score=50.23 Aligned_cols=117 Identities=16% Similarity=0.173 Sum_probs=80.9
Q ss_pred CceEEEeEEecCCCceEEEEecC-eEEEEeCcCCCCCCcEEEEc--CCCCeeEEEEEEecCCcEEEEEEecCCceEEEEe
Q 047869 1910 GAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQDNISPLHYFTL--PDDMIVDATLVIASRGKMFLIVLSECGSLYRLEL 1986 (2233)
Q Consensus 1910 g~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D~lSPvyyF~L--psGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qel 1986 (2233)
..-|..+.|-|.....||....+ .|+|||+..... ...+.+ ..+.|.+++|- +++..+++..+.+|.|+.-++
T Consensus 73 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~h~~~v~~~~~~--~~~~~~l~s~~~d~~i~iwd~ 148 (383)
T 3ei3_B 73 DRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNK--TSFIQGMGPGDAITGMKFN--QFNTNQLFVSSIRGATTLRDF 148 (383)
T ss_dssp SSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTC--EEEECCCSTTCBEEEEEEE--TTEEEEEEEEETTTEEEEEET
T ss_pred CCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCccc--ceeeecCCcCCceeEEEeC--CCCCCEEEEEeCCCEEEEEEC
Confidence 35688889999875667777765 899999986553 334443 56788888854 433467888899999998888
Q ss_pred cccCCCccccceeeeecccccccCCeEEEEeccccceeeEEecCCcEEEEEc
Q 047869 1987 SVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSFQDGTTLVGRL 2038 (2233)
Q Consensus 1987 s~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY~~G~Sf~a~L 2038 (2233)
.. . . + ..+.. .......-.++-++++-++|+....+|+..+-.+
T Consensus 149 ~~---~-~--~-~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~ 192 (383)
T 3ei3_B 149 SG---S-V--I-QVFAK-TDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL 192 (383)
T ss_dssp TS---C-E--E-EEEEC-CCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET
T ss_pred CC---C-c--e-EEEec-cCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC
Confidence 72 1 0 1 11111 1111234567889999999999999998888776
No 97
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.16 E-value=2.2 Score=47.46 Aligned_cols=161 Identities=12% Similarity=0.090 Sum_probs=87.3
Q ss_pred EEEEeecccCccceEEeeccc-ceEEEEecCCCc--eeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeCc
Q 047869 1865 EIVHLAFNSIVENYLTVAGYE-DCQVLTLNPRGE--VTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLS 1940 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGLk-DC~VLTfss~Ge--V~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS 1940 (2233)
.|.+|+|+| ++++||.++.. .+.|..+..... ..-+..-.+.--...|..+.|-|..+. ||....+ .|+|||+.
T Consensus 60 ~v~~v~~sp-~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~-las~s~D~~v~iwd~~ 137 (330)
T 2hes_X 60 AIRSVAWRP-HTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYY-LATCSRDKSVWIWETD 137 (330)
T ss_dssp CEEEEEECT-TSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCE-EEEEETTSCEEEEECC
T ss_pred CEEEEEECC-CCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCE-EEEEeCCCEEEEEecc
Confidence 578999999 56788887753 344443322110 000111111112456999999998664 6655554 89999995
Q ss_pred CCC--CCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEec
Q 047869 1941 QDN--ISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFS 2018 (2233)
Q Consensus 1941 ~D~--lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS 2018 (2233)
... ..+...+.--.+.|.++.| .++|. +++.-|.+|.|..-++.... ... .....+. .+.-.++-|+
T Consensus 138 ~~~~~~~~~~~~~~h~~~v~~v~~--~p~~~-~l~s~s~D~~i~iW~~~~~~----~~~--~~~~~~h--~~~v~~~~~~ 206 (330)
T 2hes_X 138 ESGEEYECISVLQEHSQDVKHVIW--HPSEA-LLASSSYDDTVRIWKDYDDD----WEC--VAVLNGH--EGTVWSSDFD 206 (330)
T ss_dssp TTCCCCEEEEEECCCSSCEEEEEE--CSSSS-EEEEEETTSCEEEEEEETTE----EEE--EEEECCC--SSCEEEEEEC
T ss_pred CCCCCeEEEEEeccCCCceEEEEE--CCCCC-EEEEEcCCCeEEEEECCCCC----eeE--EEEccCC--CCcEEEEEec
Confidence 432 2344445445667887765 35564 67778889999876654210 000 0011110 1223456777
Q ss_pred cc--cceeeEEecCCcEEEEEc
Q 047869 2019 ST--YKLLFLSFQDGTTLVGRL 2038 (2233)
Q Consensus 2019 ~t--l~LLF~SY~~G~Sf~a~L 2038 (2233)
++ ...|...-.+|+..+=.+
T Consensus 207 ~~~~~~~l~s~s~D~~v~iw~~ 228 (330)
T 2hes_X 207 KTEGVFRLCSGSDDSTVRVWKY 228 (330)
T ss_dssp CSSSSCEEEEEETTSCEEEEEE
T ss_pred CCCCeeEEEEEeCCCeEEEEEe
Confidence 76 345555556666655444
No 98
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=96.03 E-value=1.5 Score=47.32 Aligned_cols=203 Identities=11% Similarity=0.043 Sum_probs=118.2
Q ss_pred CceEEEeEEecCC--CceEEEEecC-eEEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEe
Q 047869 1910 GAYIRRVDWVPGS--PVQLMVVTNK-FVKIYDLSQDNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLEL 1986 (2233)
Q Consensus 1910 g~fIIKa~WLPGS--Qt~LAVVT~~-FVKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qel 1986 (2233)
...|..+.|-|.. ...||..+.+ .|+|||+..........+.-..+.|.+++|- ++|+ +++..+.+|.|+.-++
T Consensus 39 ~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~-~l~s~~~dg~v~iwd~ 115 (368)
T 3mmy_A 39 DDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWS--DDGS-KVFTASCDKTAKMWDL 115 (368)
T ss_dssp SSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEEC--TTSS-EEEEEETTSEEEEEET
T ss_pred CCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEEC--cCCC-EEEEEcCCCcEEEEEc
Confidence 5679999999986 4567777765 8999999876655556676678889888854 4664 6678889999998887
Q ss_pred cccCCCccccceeeeecccccccCCeEEEEe--ccccceeeEEecCCcEEEEEcCCCcccccceeEEEEccCCCCCCCcc
Q 047869 1987 SVEGNVGATPLKEIIQFNDREIHAKGLSLYF--SSTYKLLFLSFQDGTTLVGRLSPNAASLSEVSYVFEEQDGKLRSAGL 2064 (2233)
Q Consensus 1987 s~s~d~g~~~ltEvvq~~~~q~~~~GVSVyY--S~tl~LLF~SY~~G~Sf~a~Ls~~~~sv~eis~Vfe~~~gk~~~a~L 2064 (2233)
.... .+.... -.+.-.++.| ++.-++|+.+..+|+..+-.+.... ....+.... .
T Consensus 116 ~~~~---------~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~-----~~~~~~~~~------~- 172 (368)
T 3mmy_A 116 SSNQ---------AIQIAQ--HDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN-----PMMVLQLPE------R- 172 (368)
T ss_dssp TTTE---------EEEEEE--CSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS-----CSEEEECSS------C-
T ss_pred CCCC---------ceeecc--ccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc-----EEEEEecCC------C-
Confidence 6321 111111 1233455666 8888888888888887776653321 111111111 0
Q ss_pred cceeeccCCCceEEEEeccCCCceEEEEecCCceeeeccccccCCCCCeEEEEEeecCCCCC-eEEEEEeeCCceeEEec
Q 047869 2065 HRWKELLASSGLFFCFSSLKSNAAVAVSLGTNELIAQNMRHAAGSTSPLVGVTAYKPLSKDK-VHCLVLHDDGSLQIYSH 2143 (2233)
Q Consensus 2065 ~qWsEV~~hPGLf~cls~~~sn~pvvv~l~pd~I~iQeiK~~~~sSs~vdgva~y~p~s~~r-ttlLLLcEDGSLrIYsa 2143 (2233)
.+.-...++.++++ . .++...+.-+.......+.+... .......++. .+..... ..++.-.+||.+++|..
T Consensus 173 -~~~~~~~~~~~~~~-~--~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~dg~i~i~~~ 245 (368)
T 3mmy_A 173 -CYCADVIYPMAVVA-T--AERGLIVYQLENQPSEFRRIESP--LKHQHRCVAI-FKDKQNKPTGFALGSIEGRVAIHYI 245 (368)
T ss_dssp -EEEEEEETTEEEEE-E--GGGCEEEEECSSSCEEEEECCCS--CSSCEEEEEE-EECTTSCEEEEEEEETTSEEEEEES
T ss_pred -ceEEEecCCeeEEE-e--CCCcEEEEEeccccchhhhcccc--ccCCCceEEE-cccCCCCCCeEEEecCCCcEEEEec
Confidence 11111123444433 2 24555555554444333333331 1222233333 2222222 33788899999999986
Q ss_pred cC
Q 047869 2144 VP 2145 (2233)
Q Consensus 2144 ~P 2145 (2233)
..
T Consensus 246 ~~ 247 (368)
T 3mmy_A 246 NP 247 (368)
T ss_dssp SC
T ss_pred CC
Confidence 54
No 99
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=95.99 E-value=2.9 Score=47.18 Aligned_cols=201 Identities=8% Similarity=0.042 Sum_probs=110.7
Q ss_pred ceecccCce-EEEeeCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccc-eEEeec-------
Q 047869 1813 LLSVSSRGR-LAVGEGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVEN-YLTVAG------- 1883 (2233)
Q Consensus 1813 LLSas~rGr-LAVaEgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEd-yLAVcG------- 1883 (2233)
-++.+..|+ |++...+.|.++++.. -++.. ...+.. .... +.+++++|-.+. +++++.
T Consensus 44 ~~a~spdg~~l~~~~~~~v~~~~~~~-~g~~~------~~~~~~-~~g~-----~~~~~~spdg~~l~~~~~~~~~~~~~ 110 (365)
T 1jof_A 44 WMTFDHERKNIYGAAMKKWSSFAVKS-PTEIV------HEASHP-IGGH-----PRANDADTNTRAIFLLAAKQPPYAVY 110 (365)
T ss_dssp EEEECTTSSEEEEEEBTEEEEEEEEE-TTEEE------EEEEEE-CCSS-----GGGGCTTSCCEEEEEEECSSTTCCEE
T ss_pred EEEECCCCCEEEEEccceEEEEEECC-CCCEE------EeeEee-cCCC-----CccEEECCCCCEEEEEEecCCcceec
Confidence 456666554 7766434899998741 00000 000100 1011 225888884433 566663
Q ss_pred -------ccceEEEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEe--cCeEEEEeCc-CCCCCCcEEEEcC
Q 047869 1884 -------YEDCQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVT--NKFVKIYDLS-QDNISPLHYFTLP 1953 (2233)
Q Consensus 1884 -------LkDC~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT--~~FVKIYDLS-~D~lSPvyyF~Lp 1953 (2233)
-....|+.++.+|++...+.....-.+..+..+.|-|..+. |+++. .+.|++||+. ...+.+...+.+|
T Consensus 111 ~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~-l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~ 189 (365)
T 1jof_A 111 ANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETY-LYSADLTANKLWTHRKLASGEVELVGSVDAP 189 (365)
T ss_dssp EEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSE-EEEEETTTTEEEEEEECTTSCEEEEEEEECS
T ss_pred cceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCE-EEEEcCCCCEEEEEEECCCCCEEEeeeEecC
Confidence 23467888888888776554422224678889999998764 55543 4689999997 4445455556555
Q ss_pred C-C-CeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccc-eeee-eccccccc-C-------CeEEEE-eccc
Q 047869 1954 D-D-MIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPL-KEII-QFNDREIH-A-------KGLSLY-FSST 2020 (2233)
Q Consensus 1954 s-G-kIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~l-tEvv-q~~~~q~~-~-------~GVSVy-YS~t 2020 (2233)
. | .++..+ +.++|+...++...+|.+..-++... .+.... ...+ .++..... . ..-.+. +|++
T Consensus 190 ~~g~~p~~~~--~spdg~~l~v~~~~~~~v~v~~~~~~--~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spd 265 (365)
T 1jof_A 190 DPGDHPRWVA--MHPTGNYLYALMEAGNRICEYVIDPA--THMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFS 265 (365)
T ss_dssp STTCCEEEEE--ECTTSSEEEEEETTTTEEEEEEECTT--TCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTT
T ss_pred CCCCCCCEeE--ECCCCCEEEEEECCCCeEEEEEEeCC--CCcEEEccceEEcCCCCcCCcccccccccccccEEEECCC
Confidence 3 3 466655 35788754333334677776655431 122111 1111 12221111 1 234677 9999
Q ss_pred cceeeEEecCC
Q 047869 2021 YKLLFLSFQDG 2031 (2233)
Q Consensus 2021 l~LLF~SY~~G 2031 (2233)
-+.|+++-.++
T Consensus 266 G~~l~v~~~~~ 276 (365)
T 1jof_A 266 GKYMFASSRAN 276 (365)
T ss_dssp SSEEEEEEEES
T ss_pred CCEEEEECCCC
Confidence 99998876544
No 100
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=95.91 E-value=2.5 Score=45.80 Aligned_cols=155 Identities=12% Similarity=0.167 Sum_probs=90.2
Q ss_pred EeecccCccceEEeecccceEEEEecCC-CceeeeeeeeeccCCceEEE-eEEecCCCceEEEEecC----eEEEEeCcC
Q 047869 1868 HLAFNSIVENYLTVAGYEDCQVLTLNPR-GEVTDRLAIELALQGAYIRR-VDWVPGSPVQLMVVTNK----FVKIYDLSQ 1941 (2233)
Q Consensus 1868 sLafNP~nEdyLAVcGLkDC~VLTfss~-GeV~DRL~LeL~Leg~fIIK-a~WLPGSQt~LAVVT~~----FVKIYDLS~ 1941 (2233)
.++|+| ++++|+|++..+-.|..++.. |++.. ..+. .+..... +.|-|..+. |++.... .|+|||+..
T Consensus 44 ~~~~s~-dg~~l~~~~~~~~~i~~~d~~~~~~~~---~~~~-~~~~~~~~~~~s~dg~~-l~~~~~~~~~~~i~v~d~~~ 117 (331)
T 3u4y_A 44 DTAITS-DCSNVVVTSDFCQTLVQIETQLEPPKV---VAIQ-EGQSSMADVDITPDDQF-AVTVTGLNHPFNMQSYSFLK 117 (331)
T ss_dssp EEEECS-SSCEEEEEESTTCEEEEEECSSSSCEE---EEEE-ECSSCCCCEEECTTSSE-EEECCCSSSSCEEEEEETTT
T ss_pred eEEEcC-CCCEEEEEeCCCCeEEEEECCCCceeE---Eecc-cCCCCccceEECCCCCE-EEEecCCCCcccEEEEECCC
Confidence 889988 667999999887788888764 33311 1111 2333445 778888765 4455555 799999975
Q ss_pred CCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCc-eEEEEecccCCCccccceeeeecccccccCCeEEEEeccc
Q 047869 1942 DNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGS-LYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSST 2020 (2233)
Q Consensus 1942 D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~-LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~t 2020 (2233)
... +..+.... ...+. .+.++|+...+.-...+. ++.-++...+.. .... ...++ ...+...+-+|++
T Consensus 118 ~~~--~~~~~~~~-~~~~~--~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~--~~~~-~~~~~---~~~~~~~~~~spd 186 (331)
T 3u4y_A 118 NKF--ISTIPIPY-DAVGI--AISPNGNGLILIDRSSANTVRRFKIDADGVL--FDTG-QEFIS---GGTRPFNITFTPD 186 (331)
T ss_dssp TEE--EEEEECCT-TEEEE--EECTTSSCEEEEEETTTTEEEEEEECTTCCE--EEEE-EEEEC---SSSSEEEEEECTT
T ss_pred CCe--EEEEECCC-Cccce--EECCCCCEEEEEecCCCceEEEEEECCCCcE--eecC-Ccccc---CCCCccceEECCC
Confidence 542 33333322 33333 346788754444455577 887777633211 1111 11111 1233567889999
Q ss_pred cceeeEEec-CCcEEEEEcC
Q 047869 2021 YKLLFLSFQ-DGTTLVGRLS 2039 (2233)
Q Consensus 2021 l~LLF~SY~-~G~Sf~a~Ls 2039 (2233)
-+.|+++-. +|+..+-.+.
T Consensus 187 g~~l~v~~~~~~~v~v~d~~ 206 (331)
T 3u4y_A 187 GNFAFVANLIGNSIGILETQ 206 (331)
T ss_dssp SSEEEEEETTTTEEEEEECS
T ss_pred CCEEEEEeCCCCeEEEEECC
Confidence 988877764 5665555543
No 101
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=95.87 E-value=1.7 Score=48.56 Aligned_cols=155 Identities=15% Similarity=0.140 Sum_probs=93.0
Q ss_pred EEEEeecccC---ccceEEeecccceEEEEecCCCceeeeeeeeeccC--CceEEEeEEecCCCceEEEEec-CeEEEEe
Q 047869 1865 EIVHLAFNSI---VENYLTVAGYEDCQVLTLNPRGEVTDRLAIELALQ--GAYIRRVDWVPGSPVQLMVVTN-KFVKIYD 1938 (2233)
Q Consensus 1865 eVlsLafNP~---nEdyLAVcGLkDC~VLTfss~GeV~DRL~LeL~Le--g~fIIKa~WLPGSQt~LAVVT~-~FVKIYD 1938 (2233)
.|-+++|+|. +.++||.+|. |..|--++-+.. +..+...++ ..-|..+.|-|..+. +|.... ..|+|||
T Consensus 34 ~V~~v~~~~~~~~~~~~l~tgs~-D~~v~vW~~~~~---~~~~~~~l~gh~~~v~~~~~~~~~~~-l~s~s~D~~i~lWd 108 (321)
T 3ow8_A 34 AIWSVAWGTNKKENSETVVTGSL-DDLVKVWKWRDE---RLDLQWSLEGHQLGVVSVDISHTLPI-AASSSLDAHIRLWD 108 (321)
T ss_dssp CEEEEEEC-------CEEEEEET-TSCEEEEEEETT---EEEEEEEECCCSSCEEEEEECSSSSE-EEEEETTSEEEEEE
T ss_pred cEEEEEEecCCCCCCCEEEEEcC-CCCEEEEECCCC---CeeeeeeeccCCCCEEEEEECCCCCE-EEEEeCCCcEEEEE
Confidence 4678888874 4567776664 444443432211 222333343 345888999888754 444443 4999999
Q ss_pred CcCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEec
Q 047869 1939 LSQDNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFS 2018 (2233)
Q Consensus 1939 LS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS 2018 (2233)
+.... +...+....+.+..++ +.++|+ +++.-+.+|.++.-++...... . .++ . ....-.++-||
T Consensus 109 ~~~~~--~~~~~~~~~~~~~~~~--~spdg~-~l~~g~~dg~v~i~~~~~~~~~--~----~~~--~--~~~~v~~~~~s 173 (321)
T 3ow8_A 109 LENGK--QIKSIDAGPVDAWTLA--FSPDSQ-YLATGTHVGKVNIFGVESGKKE--Y----SLD--T--RGKFILSIAYS 173 (321)
T ss_dssp TTTTE--EEEEEECCTTCCCCEE--ECTTSS-EEEEECTTSEEEEEETTTCSEE--E----EEE--C--SSSCEEEEEEC
T ss_pred CCCCC--EEEEEeCCCccEEEEE--ECCCCC-EEEEEcCCCcEEEEEcCCCcee--E----Eec--C--CCceEEEEEEC
Confidence 97543 4445555555566554 356775 6777889999998877632110 0 111 1 12235678899
Q ss_pred cccceeeEEecCCcEEEEEcC
Q 047869 2019 STYKLLFLSFQDGTTLVGRLS 2039 (2233)
Q Consensus 2019 ~tl~LLF~SY~~G~Sf~a~Ls 2039 (2233)
++-++|...-.+|+..+-.+.
T Consensus 174 pdg~~lasg~~dg~i~iwd~~ 194 (321)
T 3ow8_A 174 PDGKYLASGAIDGIINIFDIA 194 (321)
T ss_dssp TTSSEEEEEETTSCEEEEETT
T ss_pred CCCCEEEEEcCCCeEEEEECC
Confidence 999999988889887776653
No 102
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.84 E-value=3.1 Score=46.29 Aligned_cols=159 Identities=16% Similarity=0.195 Sum_probs=89.7
Q ss_pred EEEEeecccCccceEEeeccc-ceEEEEecCCC-ceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeCcC
Q 047869 1865 EIVHLAFNSIVENYLTVAGYE-DCQVLTLNPRG-EVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQ 1941 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGLk-DC~VLTfss~G-eV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~ 1941 (2233)
.|-+++|+|. +||.+|.. .+.|..+..+. .... .+...-...-|..+.|-|..+ .||....+ .|+|||+..
T Consensus 16 ~v~~~~~s~~---~las~~~D~~i~lw~~~~~~~~~~~--~~~~~~h~~~v~~v~~sp~~~-~las~s~D~~v~iw~~~~ 89 (330)
T 2hes_X 16 KIWSFDFSQG---ILATGSTDRKIKLVSVKYDDFTLID--VLDETAHKKAIRSVAWRPHTS-LLAAGSFDSTVSIWAKEE 89 (330)
T ss_dssp CEEEEEEETT---EEEEEESSSCEEEEECSSSCCEEEE--EECTTCCCSCEEEEEECTTSS-EEEEEETTSCEEEEEC--
T ss_pred ceeeeccCCC---EEEEEcCCCEEEEEEecCCCeEEEE--EEecCCccCCEEEEEECCCCC-EEEEEeCCCcEEEEEccc
Confidence 4668888763 77776653 34454443221 1111 111110244699999999865 46666654 899999964
Q ss_pred CC-----CCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEE
Q 047869 1942 DN-----ISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLY 2016 (2233)
Q Consensus 1942 D~-----lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVy 2016 (2233)
.. ..+...+.--.+.|.+++| .++|+ +++.-|.+|.|+.-++...+.... ....++ . -.+.-.++.
T Consensus 90 ~~~~~~~~~~~~~~~~h~~~V~~v~~--sp~g~-~las~s~D~~v~iwd~~~~~~~~~--~~~~~~--~--h~~~v~~v~ 160 (330)
T 2hes_X 90 SADRTFEMDLLAIIEGHENEVKGVAW--SNDGY-YLATCSRDKSVWIWETDESGEEYE--CISVLQ--E--HSQDVKHVI 160 (330)
T ss_dssp -----CCCEEEEEEC----CEEEEEE--CTTSC-EEEEEETTSCEEEEECCTTCCCCE--EEEEEC--C--CSSCEEEEE
T ss_pred CcCccccceeEEEEcCCCCcEEEEEE--CCCCC-EEEEEeCCCEEEEEeccCCCCCeE--EEEEec--c--CCCceEEEE
Confidence 21 2334444445677887775 35664 677888999999888853322111 111111 1 123345788
Q ss_pred eccccceeeEEecCCcEEEEEc
Q 047869 2017 FSSTYKLLFLSFQDGTTLVGRL 2038 (2233)
Q Consensus 2017 YS~tl~LLF~SY~~G~Sf~a~L 2038 (2233)
|+++-++|..+-.+|+.-+=.+
T Consensus 161 ~~p~~~~l~s~s~D~~i~iW~~ 182 (330)
T 2hes_X 161 WHPSEALLASSSYDDTVRIWKD 182 (330)
T ss_dssp ECSSSSEEEEEETTSCEEEEEE
T ss_pred ECCCCCEEEEEcCCCeEEEEEC
Confidence 8988888887777887666543
No 103
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=95.82 E-value=3.3 Score=47.43 Aligned_cols=144 Identities=21% Similarity=0.247 Sum_probs=90.6
Q ss_pred cceEEeecccceEEEEecC-CCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeCcCCCCCCcEEEEcC
Q 047869 1876 ENYLTVAGYEDCQVLTLNP-RGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQDNISPLHYFTLP 1953 (2233)
Q Consensus 1876 EdyLAVcGLkDC~VLTfss-~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D~lSPvyyF~Lp 1953 (2233)
+|.|||+ + |..|.-++. .|++...+ ++.-.+.+|..+.|-|..+. ||+.+.+ .|+|||+.... +...+.-.
T Consensus 116 ~n~lAvg-l-d~tV~lWd~~tg~~~~~~--~~~~~~~~V~sv~fspdg~~-lasgs~Dg~v~iWd~~~~~--~~~~~~~h 188 (420)
T 4gga_A 116 GNVLAVA-L-DNSVYLWSASSGDILQLL--QMEQPGEYISSVAWIKEGNY-LAVGTSSAEVQLWDVQQQK--RLRNMTSH 188 (420)
T ss_dssp TSEEEEE-E-TTEEEEEETTTCCEEEEE--ECCSTTCCEEEEEECTTSSE-EEEEETTSCEEEEETTTTE--EEEEECCC
T ss_pred CCEEEEE-e-CCEEEEEECCCCCEEEEE--EecCCCCcEEEEEECCCCCE-EEEEECCCeEEEEEcCCCc--EEEEEeCC
Confidence 4688875 5 666777764 45554322 22234678999999998764 7777766 89999997543 45555544
Q ss_pred CCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccceeeEEecCCcE
Q 047869 1954 DDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSFQDGTT 2033 (2233)
Q Consensus 1954 sGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY~~G~S 2033 (2233)
.+.|...+ .++. +++.-+.+|.++..+....... ...+. . -...-..+.+++.-+.|.....+|..
T Consensus 189 ~~~v~~~s----~~~~-~l~sgs~d~~i~~~d~~~~~~~-----~~~~~--~--h~~~~~~~~~~~~g~~l~s~~~D~~v 254 (420)
T 4gga_A 189 SARVGSLS----WNSY-ILSSGSRSGHIHHHDVRVAEHH-----VATLS--G--HSQEVCGLRWAPDGRHLASGGNDNLV 254 (420)
T ss_dssp SSCEEEEE----EETT-EEEEEETTSEEEEEETTSSSCE-----EEEEE--C--CSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCceEEEe----eCCC-EEEEEeCCCceeEeeeccccee-----eEEec--c--cccceeeeeecCCCCeeeeeeccccc
Confidence 55555433 2343 6777888999988776532211 01111 1 12334557788888888888888888
Q ss_pred EEEEcCC
Q 047869 2034 LVGRLSP 2040 (2233)
Q Consensus 2034 f~a~Ls~ 2040 (2233)
.+-....
T Consensus 255 ~i~~~~~ 261 (420)
T 4gga_A 255 NVWPSAP 261 (420)
T ss_dssp EEEESSC
T ss_pred eEEeecc
Confidence 7766543
No 104
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=95.72 E-value=1.1 Score=49.84 Aligned_cols=188 Identities=9% Similarity=0.081 Sum_probs=111.5
Q ss_pred ceecccCc-eEEEe--eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecccceEE
Q 047869 1813 LLSVSSRG-RLAVG--EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYEDCQV 1889 (2233)
Q Consensus 1813 LLSas~rG-rLAVa--EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLkDC~V 1889 (2233)
.++.+..| ++++. ..+.|.++++..- ..+ ..-..+-.|.+++++| ++++|+++|..+-.|
T Consensus 36 ~~~~s~dg~~l~~~~~~d~~i~v~d~~~~-----------~~~-----~~~~~~~~v~~~~~sp-dg~~l~~~~~~~~~v 98 (391)
T 1l0q_A 36 GAVISPDGTKVYVANAHSNDVSIIDTATN-----------NVI-----ATVPAGSSPQGVAVSP-DGKQVYVTNMASSTL 98 (391)
T ss_dssp EEEECTTSSEEEEEEGGGTEEEEEETTTT-----------EEE-----EEEECSSSEEEEEECT-TSSEEEEEETTTTEE
T ss_pred eEEECCCCCEEEEECCCCCeEEEEECCCC-----------eEE-----EEEECCCCccceEECC-CCCEEEEEECCCCEE
Confidence 34555555 46554 6789999987321 000 1111222678999998 678999999877777
Q ss_pred EEecCC-CceeeeeeeeeccCCceEEEeEEecCCCceEEEEe-cCeEEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEecC
Q 047869 1890 LTLNPR-GEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVT-NKFVKIYDLSQDNISPLHYFTLPDDMIVDATLVIASR 1967 (2233)
Q Consensus 1890 LTfss~-GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT-~~FVKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~ 1967 (2233)
..++.+ |++...+. .+..+..+.|-|..+..++... ...|++||+.... +...+... +.+.+.+ +.++
T Consensus 99 ~v~d~~~~~~~~~~~-----~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~--~~~~~~~~-~~~~~~~--~~~d 168 (391)
T 1l0q_A 99 SVIDTTSNTVAGTVK-----TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKA--VINTVSVG-RSPKGIA--VTPD 168 (391)
T ss_dssp EEEETTTTEEEEEEE-----CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE--EEEEEECC-SSEEEEE--ECTT
T ss_pred EEEECCCCeEEEEEe-----CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCc--EEEEEecC-CCcceEE--ECCC
Confidence 777654 33332221 2445788999998765433333 4599999997543 33333332 3454433 4577
Q ss_pred CcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccceeeEEe---cCCcEEEEEc
Q 047869 1968 GKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSF---QDGTTLVGRL 2038 (2233)
Q Consensus 1968 G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY---~~G~Sf~a~L 2038 (2233)
|+..++.-+.+|.|+.-++.... ....+.. ...-.++.+++.-+.|+++- .+|+..+-.+
T Consensus 169 g~~l~~~~~~~~~v~~~d~~~~~------~~~~~~~-----~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~ 231 (391)
T 1l0q_A 169 GTKVYVANFDSMSISVIDTVTNS------VIDTVKV-----EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDT 231 (391)
T ss_dssp SSEEEEEETTTTEEEEEETTTTE------EEEEEEC-----SSEEEEEEECTTSSEEEEEEECSSCCEEEEEET
T ss_pred CCEEEEEeCCCCEEEEEECCCCe------EEEEEec-----CCCccceEECCCCCEEEEEecCcCCCcEEEEEC
Confidence 87665666788999987775211 1111111 22345678888888888876 3556555444
No 105
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=95.72 E-value=0.25 Score=62.34 Aligned_cols=183 Identities=13% Similarity=0.170 Sum_probs=109.8
Q ss_pred cCceEEEe-eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecc-cceEEEEecCC
Q 047869 1818 SRGRLAVG-EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGY-EDCQVLTLNPR 1895 (2233)
Q Consensus 1818 ~rGrLAVa-EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGL-kDC~VLTfss~ 1895 (2233)
.+.+||++ ..+.|-|++...++.+-+ . -.++.+ -.|.+++|+| ++++||++|. ..+.|..+..
T Consensus 96 dG~~LAs~s~dg~V~iwd~~~~l~~l~-~--------~~~~~~----~sv~svafSP-DG~~LAsgs~DGtVkIWd~~~- 160 (588)
T 2j04_A 96 IDDWMAVLSNNGNVSVFKDNKMLTNLD-S--------KGNLSS----RTYHCFEWNP-IESSIVVGNEDGELQFFSIRK- 160 (588)
T ss_dssp SSSCEEEEETTSCEEEEETTEEEEECC-C--------SSCSTT----TCEEEEEECS-SSSCEEEEETTSEEEEEECCC-
T ss_pred CCCEEEEEeCCCcEEEEeCCceeeecc-C--------CCcccc----ccEEEEEEcC-CCCEEEEEcCCCEEEEEECCC-
Confidence 45558876 778899999766554422 1 011111 1366999999 8999999996 4455666543
Q ss_pred Cceeee-----eeeeeccC--CceEEEeEEecCCCceEEEEec-CeEEEEeCcCCCCC-CcEEEE-cCCCCeeEEEEEEe
Q 047869 1896 GEVTDR-----LAIELALQ--GAYIRRVDWVPGSPVQLMVVTN-KFVKIYDLSQDNIS-PLHYFT-LPDDMIVDATLVIA 1965 (2233)
Q Consensus 1896 GeV~DR-----L~LeL~Le--g~fIIKa~WLPGSQt~LAVVT~-~FVKIYDLS~D~lS-PvyyF~-LpsGkIrDaTfv~~ 1965 (2233)
|...+. -.++.... .+-|.++.|-|+. +|.+.. ..||+||+...... +...+. ...+.|.+++|.
T Consensus 161 ~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs-- 235 (588)
T 2j04_A 161 NSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV-- 235 (588)
T ss_dssp CTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--
T ss_pred CccccccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--
Confidence 322111 11221222 3579999999987 554444 49999999887754 334442 455789999986
Q ss_pred cCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccceeeEEecCCc
Q 047869 1966 SRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSFQDGT 2032 (2233)
Q Consensus 1966 e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY~~G~ 2032 (2233)
|+ +++..+ +|.|+.-++.... . .+... +....-.++.+.-|++-+.|..++.+|+
T Consensus 236 --g~-~LASa~-~~tIkLWd~~~~~----~---~~~~~-gh~~~V~~va~~~s~d~~~La~a~edG~ 290 (588)
T 2j04_A 236 --DY-KVVLTC-PGYVHKIDLKNYS----I---SSLKT-GSLENFHIIPLNHEKESTILLMSNKTSY 290 (588)
T ss_dssp --TT-EEEEEC-SSEEEEEETTTTE----E---EEEEC-SCCSCCCEEEETTCSSCEEEEECSSCEE
T ss_pred --CC-EEEEEe-CCeEEEEECCCCe----E---EEEEc-CCCceEEEEEeeeCCCCCEEEEEcCCCC
Confidence 43 444444 6888876655211 1 01111 1111122333322888899999999999
No 106
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=95.71 E-value=3.4 Score=45.85 Aligned_cols=163 Identities=14% Similarity=0.117 Sum_probs=89.5
Q ss_pred EeecccCccceEEeecc-----cceEEEEecCC-CceeeeeeeeeccCCceEEEeEEecCCCceEEEEe--cCeEEEEeC
Q 047869 1868 HLAFNSIVENYLTVAGY-----EDCQVLTLNPR-GEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVT--NKFVKIYDL 1939 (2233)
Q Consensus 1868 sLafNP~nEdyLAVcGL-----kDC~VLTfss~-GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT--~~FVKIYDL 1939 (2233)
.|+++| ++++|++++. ..+.++.++.. |+....-. ....+.....+.| .|. .|+++. ...|.|||+
T Consensus 54 ~l~~sp-dg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~--~~~~~~~p~~~~~-dg~--~l~~~~~~~~~v~~~~~ 127 (361)
T 3scy_A 54 YLIPSA-DGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNT--QKTMGADPCYLTT-NGK--NIVTANYSGGSITVFPI 127 (361)
T ss_dssp SEEECT-TSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEE--EECSSSCEEEEEE-CSS--EEEEEETTTTEEEEEEB
T ss_pred eEEECC-CCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeE--eccCCCCcEEEEE-CCC--EEEEEECCCCEEEEEEe
Confidence 578888 6789999988 47888999887 65432211 1223445555555 443 455553 348999999
Q ss_pred cCCCC-CCcEEEEcCCCCee---------EEEEEEecCCcEEEEEEecCCceEEEEecccCCCc--c-ccce---eeeec
Q 047869 1940 SQDNI-SPLHYFTLPDDMIV---------DATLVIASRGKMFLIVLSECGSLYRLELSVEGNVG--A-TPLK---EIIQF 2003 (2233)
Q Consensus 1940 S~D~l-SPvyyF~LpsGkIr---------DaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g--~-~~lt---Evvq~ 2003 (2233)
..+.. .......-..|.-. --.+.+.++|+..++.-..++.++.-++....... . .... .....
T Consensus 128 ~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~ 207 (361)
T 3scy_A 128 GQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKV 207 (361)
T ss_dssp CTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEEC
T ss_pred CCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceec
Confidence 76532 22211111122110 02234467887555554457788877776433200 1 1111 11222
Q ss_pred ccccccCCeEEEEeccccceeeEEe-cCCcEEEEEcC
Q 047869 2004 NDREIHAKGLSLYFSSTYKLLFLSF-QDGTTLVGRLS 2039 (2233)
Q Consensus 2004 ~~~q~~~~GVSVyYS~tl~LLF~SY-~~G~Sf~a~Ls 2039 (2233)
+. ..+--.+.+|++-+.||++- .+|+..+-.+.
T Consensus 208 ~~---~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~ 241 (361)
T 3scy_A 208 AP---GSGPRHLIFNSDGKFAYLINEIGGTVIAFRYA 241 (361)
T ss_dssp CT---TCCEEEEEECTTSSEEEEEETTTCEEEEEEEE
T ss_pred CC---CCCCeEEEEcCCCCEEEEEcCCCCeEEEEEec
Confidence 22 23344688999999888877 46666665554
No 107
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=95.66 E-value=2.4 Score=43.87 Aligned_cols=182 Identities=9% Similarity=0.072 Sum_probs=99.9
Q ss_pred cCceEEEeeCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeeccc---ceEEEEecC
Q 047869 1818 SRGRLAVGEGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYE---DCQVLTLNP 1894 (2233)
Q Consensus 1818 ~rGrLAVaEgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLk---DC~VLTfss 1894 (2233)
.+.++|+...++|.++++..- . .... +....-.-.|..++|+| ++++||+++.. ...|..++.
T Consensus 52 dg~~l~~~~~~~i~~~d~~~~----~------~~~~---~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~l~~~~~ 117 (297)
T 2ojh_A 52 DGKYLLLNSEGLLYRLSLAGD----P------SPEK---VDTGFATICNNDHGISP-DGALYAISDKVEFGKSAIYLLPS 117 (297)
T ss_dssp TSSEEEEEETTEEEEEESSSC----C------SCEE---CCCTTCCCBCSCCEECT-TSSEEEEEECTTTSSCEEEEEET
T ss_pred CCCEEEEEcCCeEEEEeCCCC----C------CceE---eccccccccccceEECC-CCCEEEEEEeCCCCcceEEEEEC
Confidence 345577778889999887430 0 0001 11111112355788988 67788888743 577877765
Q ss_pred CCceeeeeeeeeccCCceEEEeEEecCCCceEEEE-ecCeEEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEE
Q 047869 1895 RGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVV-TNKFVKIYDLSQDNISPLHYFTLPDDMIVDATLVIASRGKMFLI 1973 (2233)
Q Consensus 1895 ~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVV-T~~FVKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~IL 1973 (2233)
.+....++ .....+..+.|-|..+..+... ....++||++..+.-.+ ..+.-..+.+...+ +.++|..+++
T Consensus 118 ~~~~~~~~-----~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~--~s~dg~~l~~ 189 (297)
T 2ojh_A 118 TGGTPRLM-----TKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVE-TRLTHGEGRNDGPD--YSPDGRWIYF 189 (297)
T ss_dssp TCCCCEEC-----CSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCE-EECCCSSSCEEEEE--ECTTSSEEEE
T ss_pred CCCceEEe-----ecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcc-eEcccCCCccccce--ECCCCCEEEE
Confidence 54332222 1122377789999887644333 34578999976554322 22222344565544 3577876555
Q ss_pred EEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccceeeEEecC
Q 047869 1974 VLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSFQD 2030 (2233)
Q Consensus 1974 VLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY~~ 2030 (2233)
..+.+|.+..-.+...+.. .. .+... .....++.+|++-+.|++.-.+
T Consensus 190 ~~~~~~~~~i~~~~~~~~~-~~------~~~~~--~~~~~~~~~s~dg~~l~~~~~~ 237 (297)
T 2ojh_A 190 NSSRTGQMQIWRVRVDGSS-VE------RITDS--AYGDWFPHPSPSGDKVVFVSYD 237 (297)
T ss_dssp EECTTSSCEEEEEETTSSC-EE------ECCCC--SEEEEEEEECTTSSEEEEEEEE
T ss_pred EecCCCCccEEEECCCCCC-cE------EEecC--CcccCCeEECCCCCEEEEEEcC
Confidence 5555777666666533211 11 11111 1223457788888876655544
No 108
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=95.52 E-value=2.3 Score=48.92 Aligned_cols=153 Identities=11% Similarity=0.113 Sum_probs=94.8
Q ss_pred eEEEEeecccCccceEEeecccceEEEEec-CCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeCcC
Q 047869 1864 FEIVHLAFNSIVENYLTVAGYEDCQVLTLN-PRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQ 1941 (2233)
Q Consensus 1864 FeVlsLafNP~nEdyLAVcGLkDC~VLTfs-s~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~ 1941 (2233)
-.|..++|+| +.++||.+|- |..|.-++ ..|+..-. +.--...|..+.|-|+.+ .||..+.+ .|+|||+..
T Consensus 109 ~~V~~~~~~p-~~~~l~s~s~-Dg~i~vwd~~~~~~~~~----l~~h~~~V~~v~~~~~~~-~l~sgs~D~~i~iwd~~~ 181 (410)
T 1vyh_C 109 SPVTRVIFHP-VFSVMVSASE-DATIKVWDYETGDFERT----LKGHTDSVQDISFDHSGK-LLASCSADMTIKLWDFQG 181 (410)
T ss_dssp SCEEEEEECS-SSSEEEEEES-SSCEEEEETTTCCCCEE----ECCCSSCEEEEEECTTSS-EEEEEETTSCCCEEETTS
T ss_pred CcEEEEEEcC-CCCEEEEEeC-CCeEEEEECCCCcEEEE----EeccCCcEEEEEEcCCCC-EEEEEeCCCeEEEEeCCC
Confidence 4688999999 5667776664 44444443 23433222 122256799999999876 46666665 899999964
Q ss_pred CCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEecccc
Q 047869 1942 DNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTY 2021 (2233)
Q Consensus 1942 D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl 2021 (2233)
- .+...+.-..+.|..++|- ++|. +++..|.+|.|+.-++.... . + ..++ + -...--++.++++-
T Consensus 182 ~--~~~~~~~~h~~~V~~v~~~--p~~~-~l~s~s~D~~i~~wd~~~~~----~-~-~~~~--~--h~~~v~~~~~~~~g 246 (410)
T 1vyh_C 182 F--ECIRTMHGHDHNVSSVSIM--PNGD-HIVSASRDKTIKMWEVQTGY----C-V-KTFT--G--HREWVRMVRPNQDG 246 (410)
T ss_dssp S--CEEECCCCCSSCEEEEEEC--SSSS-EEEEEETTSEEEEEETTTCC----E-E-EEEE--C--CSSCEEEEEECTTS
T ss_pred C--ceeEEEcCCCCCEEEEEEe--CCCC-EEEEEeCCCeEEEEECCCCc----E-E-EEEe--C--CCccEEEEEECCCC
Confidence 3 3344444445677776654 5564 67788999999988876321 0 0 0111 1 11223456788888
Q ss_pred ceeeEEecCCcEEEEEc
Q 047869 2022 KLLFLSFQDGTTLVGRL 2038 (2233)
Q Consensus 2022 ~LLF~SY~~G~Sf~a~L 2038 (2233)
++|..+-.+|+..+-.+
T Consensus 247 ~~l~s~s~D~~v~vwd~ 263 (410)
T 1vyh_C 247 TLIASCSNDQTVRVWVV 263 (410)
T ss_dssp SEEEEEETTSCEEEEET
T ss_pred CEEEEEcCCCeEEEEEC
Confidence 88888888887766554
No 109
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=95.48 E-value=3.8 Score=46.21 Aligned_cols=155 Identities=15% Similarity=0.191 Sum_probs=97.3
Q ss_pred EEEEeecccCccceEEeecc-cceEEEEecCCCceeeeeeeeeccCCceEEEeEEecCCC-ceEEEEecC-eEEEEeCcC
Q 047869 1865 EIVHLAFNSIVENYLTVAGY-EDCQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSP-VQLMVVTNK-FVKIYDLSQ 1941 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGL-kDC~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQ-t~LAVVT~~-FVKIYDLS~ 1941 (2233)
.|..++|+|.. ++|+.++. ..+.+.-+. +|+....+ .-.+.-|..+.|-|... ..|+..+.+ .|+|||+..
T Consensus 156 ~v~~~~~~~~~-~~l~t~s~D~~v~lwd~~-~~~~~~~~----~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~ 229 (354)
T 2pbi_B 156 YLSACSFTNSD-MQILTASGDGTCALWDVE-SGQLLQSF----HGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRS 229 (354)
T ss_dssp CEEEEEECSSS-SEEEEEETTSEEEEEETT-TCCEEEEE----ECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTT
T ss_pred cEEEEEEeCCC-CEEEEEeCCCcEEEEeCC-CCeEEEEE----cCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCC
Confidence 46788998854 45554443 345555443 34433222 22245677788888643 356655554 899999976
Q ss_pred CCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEecccc
Q 047869 1942 DNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTY 2021 (2233)
Q Consensus 1942 D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl 2021 (2233)
. .++..|....+.|..++|- ++|. .++..|.+|.+..-++..... ...........+..++-||++-
T Consensus 230 ~--~~~~~~~~h~~~v~~v~~~--p~~~-~l~s~s~D~~v~lwd~~~~~~--------~~~~~~~~~~~~~~~~~~s~~g 296 (354)
T 2pbi_B 230 G--QCVQAFETHESDVNSVRYY--PSGD-AFASGSDDATCRLYDLRADRE--------VAIYSKESIIFGASSVDFSLSG 296 (354)
T ss_dssp C--CEEEEECCCSSCEEEEEEC--TTSS-EEEEEETTSCEEEEETTTTEE--------EEEECCTTCCSCEEEEEECTTS
T ss_pred C--cEEEEecCCCCCeEEEEEe--CCCC-EEEEEeCCCeEEEEECCCCcE--------EEEEcCCCcccceeEEEEeCCC
Confidence 4 3566676667788877753 5664 677888999999888763211 0011111122345678899999
Q ss_pred ceeeEEecCCcEEEEEc
Q 047869 2022 KLLFLSFQDGTTLVGRL 2038 (2233)
Q Consensus 2022 ~LLF~SY~~G~Sf~a~L 2038 (2233)
++|+.++.+|+..+=.+
T Consensus 297 ~~l~~g~~d~~i~vwd~ 313 (354)
T 2pbi_B 297 RLLFAGYNDYTINVWDV 313 (354)
T ss_dssp SEEEEEETTSCEEEEET
T ss_pred CEEEEEECCCcEEEEEC
Confidence 99999999888777554
No 110
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=95.41 E-value=5.1 Score=45.88 Aligned_cols=151 Identities=15% Similarity=0.127 Sum_probs=90.8
Q ss_pred cceecccCceEEEeeCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecccceEEEE
Q 047869 1812 SLLSVSSRGRLAVGEGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYEDCQVLT 1891 (2233)
Q Consensus 1812 qLLSas~rGrLAVaEgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLkDC~VLT 1891 (2233)
++|+=+..+.|||+-++.|-|+++..- ....+..+ ..-.-.|.+|+|+| ++++||+++. |..|.-
T Consensus 109 ~~l~wS~~n~lAvgld~tV~lWd~~tg-----------~~~~~~~~--~~~~~~V~sv~fsp-dg~~lasgs~-Dg~v~i 173 (420)
T 4gga_A 109 NLVDWSSGNVLAVALDNSVYLWSASSG-----------DILQLLQM--EQPGEYISSVAWIK-EGNYLAVGTS-SAEVQL 173 (420)
T ss_dssp BCEEECTTSEEEEEETTEEEEEETTTC-----------CEEEEEEC--CSTTCCEEEEEECT-TSSEEEEEET-TSCEEE
T ss_pred eeEEECCCCEEEEEeCCEEEEEECCCC-----------CEEEEEEe--cCCCCcEEEEEECC-CCCEEEEEEC-CCeEEE
Confidence 456666778999999999999987421 11111111 11223588999999 7788887654 444444
Q ss_pred ecC-CCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEecCCc
Q 047869 1892 LNP-RGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQDNISPLHYFTLPDDMIVDATLVIASRGK 1969 (2233)
Q Consensus 1892 fss-~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~ 1969 (2233)
++. .|+....+ .-....|..+.|-+ ..|+....+ .|++||..... .++..+.-..+.+....+ ...|.
T Consensus 174 Wd~~~~~~~~~~----~~h~~~v~~~s~~~---~~l~sgs~d~~i~~~d~~~~~-~~~~~~~~h~~~~~~~~~--~~~g~ 243 (420)
T 4gga_A 174 WDVQQQKRLRNM----TSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAE-HHVATLSGHSQEVCGLRW--APDGR 243 (420)
T ss_dssp EETTTTEEEEEE----CCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSS-CEEEEEECCSSCEEEEEE--CTTSS
T ss_pred EEcCCCcEEEEE----eCCCCceEEEeeCC---CEEEEEeCCCceeEeeecccc-eeeEEecccccceeeeee--cCCCC
Confidence 432 33332221 12245566777743 245555544 89999987643 344445444555554442 35564
Q ss_pred EEEEEEecCCceEEEEecc
Q 047869 1970 MFLIVLSECGSLYRLELSV 1988 (2233)
Q Consensus 1970 ~~ILVLSS~G~LY~Qels~ 1988 (2233)
+++..+.+|.++.-++..
T Consensus 244 -~l~s~~~D~~v~i~~~~~ 261 (420)
T 4gga_A 244 -HLASGGNDNLVNVWPSAP 261 (420)
T ss_dssp -EEEEEETTSCEEEEESSC
T ss_pred -eeeeeeccccceEEeecc
Confidence 677788999999887763
No 111
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=95.38 E-value=5.2 Score=45.83 Aligned_cols=258 Identities=10% Similarity=0.088 Sum_probs=132.7
Q ss_pred CceEEEe-eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecccceEEEEec-CCC
Q 047869 1819 RGRLAVG-EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYEDCQVLTLN-PRG 1896 (2233)
Q Consensus 1819 rGrLAVa-EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLkDC~VLTfs-s~G 1896 (2233)
++++|.+ ..+.|.|+++..--... +++ .-.-.|..++|+ +++||++|. |..|.-++ .+|
T Consensus 129 g~~l~sg~~dg~i~vwd~~~~~~~~----------~~~-----~h~~~v~~~~~~---~~~l~s~~~-dg~i~vwd~~~~ 189 (445)
T 2ovr_B 129 GNRIVSGSDDNTLKVWSAVTGKCLR----------TLV-----GHTGGVWSSQMR---DNIIISGST-DRTLKVWNAETG 189 (445)
T ss_dssp TTEEEEEETTSCEEEEETTTCCEEE----------ECC-----CCSSCEEEEEEE---TTEEEEEET-TSCEEEEETTTT
T ss_pred CCEEEEEECCCcEEEEECCCCcEEE----------EEc-----CCCCCEEEEEec---CCEEEEEeC-CCeEEEEECCcC
Confidence 4556654 88899999974211111 111 011235677775 567776665 33444443 334
Q ss_pred ceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEE
Q 047869 1897 EVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQDNISPLHYFTLPDDMIVDATLVIASRGKMFLIVL 1975 (2233)
Q Consensus 1897 eV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVL 1975 (2233)
+....+ .-....|..+.|-+ ..+++.+.+ .|+|||+... .+...+.-..+.|....+ +|. ++++.
T Consensus 190 ~~~~~~----~~h~~~v~~~~~~~---~~l~s~s~dg~i~~wd~~~~--~~~~~~~~~~~~v~~~~~----~~~-~l~~~ 255 (445)
T 2ovr_B 190 ECIHTL----YGHTSTVRCMHLHE---KRVVSGSRDATLRVWDIETG--QCLHVLMGHVAAVRCVQY----DGR-RVVSG 255 (445)
T ss_dssp EEEEEE----CCCSSCEEEEEEET---TEEEEEETTSEEEEEESSSC--CEEEEEECCSSCEEEEEE----CSS-CEEEE
T ss_pred cEEEEE----CCCCCcEEEEEecC---CEEEEEeCCCEEEEEECCCC--cEEEEEcCCcccEEEEEE----CCC-EEEEE
Confidence 333222 22345678888843 346666655 8999999764 456677777788887776 453 67888
Q ss_pred ecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccceeeEEecCCcEEEEEcCCCcccccceeEEEEcc
Q 047869 1976 SECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSFQDGTTLVGRLSPNAASLSEVSYVFEEQ 2055 (2233)
Q Consensus 1976 SS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY~~G~Sf~a~Ls~~~~sv~eis~Vfe~~ 2055 (2233)
+.+|.|+.-++.... .+ ..... ..+.-.++.+ .-+.++.+..+|+..+-.+.... .+. .+..
T Consensus 256 ~~dg~i~iwd~~~~~-----~~---~~~~~--~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~----~~~-~~~~- 317 (445)
T 2ovr_B 256 AYDFMVKVWDPETET-----CL---HTLQG--HTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGN----CIH-TLTG- 317 (445)
T ss_dssp ETTSCEEEEEGGGTE-----EE---EEECC--CSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCC----EEE-EECC-
T ss_pred cCCCEEEEEECCCCc-----Ee---EEecC--CCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCC----EEE-EEcC-
Confidence 899999988775321 00 01111 1122334444 44556666667776665553221 111 1110
Q ss_pred CCCCCCCcccceeeccCCCceEEEEeccCCCceEEEEecCCceeeeccccccCCCCCeEEEEEeecCCCCCeEEEEEeeC
Q 047869 2056 DGKLRSAGLHRWKELLASSGLFFCFSSLKSNAAVAVSLGTNELIAQNMRHAAGSTSPLVGVTAYKPLSKDKVHCLVLHDD 2135 (2233)
Q Consensus 2056 ~gk~~~a~L~qWsEV~~hPGLf~cls~~~sn~pvvv~l~pd~I~iQeiK~~~~sSs~vdgva~y~p~s~~rttlLLLcED 2135 (2233)
.. .....+. ..+..+++.+. ++..-+.-+...+ .++.++........+..++. +...++.=.+|
T Consensus 318 -~~---~~v~~~~---~~~~~l~~~~~--dg~i~vwd~~~~~-~~~~~~~~~~~~~~v~~~~~------~~~~l~s~~~d 381 (445)
T 2ovr_B 318 -HQ---SLTSGME---LKDNILVSGNA--DSTVKIWDIKTGQ-CLQTLQGPNKHQSAVTCLQF------NKNFVITSSDD 381 (445)
T ss_dssp -CC---SCEEEEE---EETTEEEEEET--TSCEEEEETTTCC-EEEEECSTTSCSSCEEEEEE------CSSEEEEEETT
T ss_pred -Cc---ccEEEEE---EeCCEEEEEeC--CCeEEEEECCCCc-EEEEEccCCCCCCCEEEEEE------CCCEEEEEeCC
Confidence 00 0111111 01334433222 3443333333332 23334332222344445544 23456777889
Q ss_pred CceeEEec
Q 047869 2136 GSLQIYSH 2143 (2233)
Q Consensus 2136 GSLrIYsa 2143 (2233)
|.+++|..
T Consensus 382 g~v~iwd~ 389 (445)
T 2ovr_B 382 GTVKLWDL 389 (445)
T ss_dssp SEEEEEET
T ss_pred CeEEEEEC
Confidence 99999984
No 112
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=95.31 E-value=2.7 Score=47.73 Aligned_cols=205 Identities=13% Similarity=0.124 Sum_probs=116.0
Q ss_pred cCceEEEe-eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecccceEEEEecC-C
Q 047869 1818 SRGRLAVG-EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYEDCQVLTLNP-R 1895 (2233)
Q Consensus 1818 ~rGrLAVa-EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLkDC~VLTfss-~ 1895 (2233)
.+..||.+ ..+.|.|+++..........+ . ...+. .-.-.|.++.|+|..+.+|+.++. |-.|.-++- .
T Consensus 119 ~g~~las~~~d~~v~iw~~~~~~~~~~~~~-----~-~~~~~--gh~~~v~~~~~~~~~~~~l~s~s~-D~~i~~wd~~~ 189 (380)
T 3iz6_a 119 NGQSVACGGLDSACSIFNLSSQADRDGNMP-----V-SRVLT--GHKGYASSCQYVPDQETRLITGSG-DQTCVLWDVTT 189 (380)
T ss_dssp TSSEEEECCSSSCCEEEECCCCSSCCCSST-----T-CCBCC--CCSSCCCCCBCCSSSSSCEEEECT-TSCEEEECTTT
T ss_pred CCCEEEEeeCCCcEEEEECCCCccccCCcc-----c-eeecc--CCCcceEEEEEecCCCCEEEEECC-CCcEEEEEcCC
Confidence 34456654 778888998854321111000 0 00010 011235578899988887776654 444444432 3
Q ss_pred Cceeeeeeeeecc-CCceEEEeEEecCCCceEEEEecC-eEEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEE
Q 047869 1896 GEVTDRLAIELAL-QGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQDNISPLHYFTLPDDMIVDATLVIASRGKMFLI 1973 (2233)
Q Consensus 1896 GeV~DRL~LeL~L-eg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~IL 1973 (2233)
|.....+..+... ....|..+.|-|.....|+....+ .|+|||+.... .+...|.--.+.|..++|- ++|. +++
T Consensus 190 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~-~~~~~~~~h~~~v~~v~~~--p~~~-~l~ 265 (380)
T 3iz6_a 190 GQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITS-RAVRTYHGHEGDINSVKFF--PDGQ-RFG 265 (380)
T ss_dssp CCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTC-CCCEEECCCSSCCCEEEEC--TTSS-EEE
T ss_pred CcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCC-cceEEECCcCCCeEEEEEe--cCCC-eEE
Confidence 3332222112111 255688999988655566666655 99999996432 3566666667888887754 5664 677
Q ss_pred EEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccceeeEEecCCcEEEEEc
Q 047869 1974 VLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSFQDGTTLVGRL 2038 (2233)
Q Consensus 1974 VLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY~~G~Sf~a~L 2038 (2233)
.-|.+|.|..-++........+.... . ........-.++-||++-++|+..+.+|+.++=.+
T Consensus 266 s~s~D~~i~lwd~~~~~~~~~~~~~~--~-~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~ 327 (380)
T 3iz6_a 266 TGSDDGTCRLFDMRTGHQLQVYNREP--D-RNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDT 327 (380)
T ss_dssp EECSSSCEEEEETTTTEEEEEECCCC--S-SSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEET
T ss_pred EEcCCCeEEEEECCCCcEEEEecccc--c-ccccccCceEEEEECCCCCEEEEEECCCCEEEEEC
Confidence 88999999988876321100000000 0 00000111246788999999999999888777554
No 113
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=95.24 E-value=0.74 Score=53.04 Aligned_cols=117 Identities=10% Similarity=0.067 Sum_probs=79.3
Q ss_pred eEEEeEEecCCCceEEEEecC-eEEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccC
Q 047869 1912 YIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQDNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEG 1990 (2233)
Q Consensus 1912 fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~ 1990 (2233)
.|..+.|=|.....||+.+.+ .|+|||+..........+.-..+.|.+.+|-. .+| .+++..|.+|.|..-+++..
T Consensus 121 ~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p-~~~-~~l~s~s~D~~v~iwd~~~~- 197 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNP-LNT-NQFYASSMEGTTRLQDFKGN- 197 (435)
T ss_dssp CEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECS-SCT-TEEEEECSSSCEEEEETTSC-
T ss_pred CEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeC-CCC-CEEEEEeCCCEEEEeeccCC-
Confidence 478889999777778888776 89999998776655555555678899888632 245 36778889999988776521
Q ss_pred CCccccceeeeecccccccCCeEEEEeccccceeeEEecCCcEEEEEc
Q 047869 1991 NVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSFQDGTTLVGRL 2038 (2233)
Q Consensus 1991 d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY~~G~Sf~a~L 2038 (2233)
. ...+.. .......-.++.|+++-++|.....+|+..+-.+
T Consensus 198 ---~---~~~~~~-~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~ 238 (435)
T 4e54_B 198 ---I---LRVFAS-SDTINIWFCSLDVSASSRMVVTGDNVGNVILLNM 238 (435)
T ss_dssp ---E---EEEEEC-CSSCSCCCCCEEEETTTTEEEEECSSSBEEEEES
T ss_pred ---c---eeEEec-cCCCCccEEEEEECCCCCEEEEEeCCCcEeeecc
Confidence 0 011110 1111222346788888888888888888777655
No 114
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=95.02 E-value=5.5 Score=44.08 Aligned_cols=116 Identities=9% Similarity=0.123 Sum_probs=73.1
Q ss_pred EEEEeecccCccceEEeecccceEEEEecCC--CceeeeeeeeeccCCceEEEeEEecCCCceEEEEe-cCeEEEEeCcC
Q 047869 1865 EIVHLAFNSIVENYLTVAGYEDCQVLTLNPR--GEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVT-NKFVKIYDLSQ 1941 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGLkDC~VLTfss~--GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT-~~FVKIYDLS~ 1941 (2233)
.|.+|+|+|..+++||.+|. |..|.-++-. ........-.+.--...|..+.|-|..+. |+... ...|||||+..
T Consensus 19 ~V~~l~~~~~~~~~l~s~s~-D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~-l~s~s~D~~v~~wd~~~ 96 (319)
T 3frx_A 19 WVTSLATSAGQPNLLLSASR-DKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAY-ALSASWDKTLRLWDVAT 96 (319)
T ss_dssp CEEEEEECSSCTTEEEEEET-TSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSE-EEEEETTSEEEEEETTT
T ss_pred eEEEEEccCCCccEEEEecC-CccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCE-EEEEeCCCEEEEEECCC
Confidence 47789999988888888775 4444444322 11111111112222567889999998765 44444 45999999975
Q ss_pred CCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEec
Q 047869 1942 DNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELS 1987 (2233)
Q Consensus 1942 D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels 1987 (2233)
.. +...|.-..+.|..++| .++|. +++.-|.+|.|..-++.
T Consensus 97 ~~--~~~~~~~h~~~v~~~~~--~~~~~-~l~s~s~D~~i~vwd~~ 137 (319)
T 3frx_A 97 GE--TYQRFVGHKSDVMSVDI--DKKAS-MIISGSRDKTIKVWTIK 137 (319)
T ss_dssp TE--EEEEEECCSSCEEEEEE--CTTSC-EEEEEETTSCEEEEETT
T ss_pred CC--eeEEEccCCCcEEEEEE--cCCCC-EEEEEeCCCeEEEEECC
Confidence 43 45566666777887764 34553 66777888888766553
No 115
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=95.02 E-value=4.5 Score=43.05 Aligned_cols=158 Identities=16% Similarity=0.165 Sum_probs=84.7
Q ss_pred cceecccCceEEEeeCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecccceEEEE
Q 047869 1812 SLLSVSSRGRLAVGEGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYEDCQVLT 1891 (2233)
Q Consensus 1812 qLLSas~rGrLAVaEgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLkDC~VLT 1891 (2233)
++|+=+..+.|||+-.++|-|+++..- ..+.. +.-..-.-.|.+|+|+| ++++||++|. |..|.-
T Consensus 29 ~~l~WS~~~~lAvg~D~tV~iWd~~tg-----------~~~~~--~~~~~~~~~V~~v~~~~-~~~~l~sgs~-Dg~v~i 93 (318)
T 4ggc_A 29 NLVDWSSGNVLAVALDNSVYLWSASSG-----------DILQL--LQMEQPGEYISSVAWIK-EGNYLAVGTS-SAEVQL 93 (318)
T ss_dssp BCEEECTTSEEEEEETTEEEEEETTTC-----------CEEEE--EECCSTTCCEEEEEECT-TSSEEEEEET-TSEEEE
T ss_pred eEEEECCCCEEEEEeCCEEEEEECCCC-----------CEEEE--EEecCCCCeEEEEEECC-CCCEEEEEEC-CCcEEE
Confidence 456666778899999999999997421 10111 11111223488999999 6778887665 333333
Q ss_pred ec-CCCceeeeeeee-------------------------------------eccCCceEEEeEEecCCCceEEEEec-C
Q 047869 1892 LN-PRGEVTDRLAIE-------------------------------------LALQGAYIRRVDWVPGSPVQLMVVTN-K 1932 (2233)
Q Consensus 1892 fs-s~GeV~DRL~Le-------------------------------------L~Leg~fIIKa~WLPGSQt~LAVVT~-~ 1932 (2233)
++ .+|+....+.-| +.-....+..+.|-|..+. |+.... .
T Consensus 94 w~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~s~~~d~ 172 (318)
T 4ggc_A 94 WDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRH-LASGGNDN 172 (318)
T ss_dssp EETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSE-EEEEETTS
T ss_pred eecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCE-EEEEecCc
Confidence 32 223222211000 0001234666777777655 444444 4
Q ss_pred eEEEEeCcCCCC--CCcEEEEcCCCCeeEEEEEEecCCcEEE-EEEecCCceEEEEe
Q 047869 1933 FVKIYDLSQDNI--SPLHYFTLPDDMIVDATLVIASRGKMFL-IVLSECGSLYRLEL 1986 (2233)
Q Consensus 1933 FVKIYDLS~D~l--SPvyyF~LpsGkIrDaTfv~~e~G~~~I-LVLSS~G~LY~Qel 1986 (2233)
.|+|||+..... .+.....-..+.|....+... .+.... ..-+..|.|..-+.
T Consensus 173 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~i~lwd~ 228 (318)
T 4ggc_A 173 LVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPW-QSNVLATGGGTSDRHIRIWNV 228 (318)
T ss_dssp CEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTT-STTEEEEEECTTTCEEEEEET
T ss_pred ceeEEECCCCcccccceeeecccCCceEEEEecCC-CCcEEEEEecCCCCEEEEEec
Confidence 899999986443 344555556667776665432 222222 22344566655443
No 116
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=95.02 E-value=5.2 Score=43.82 Aligned_cols=149 Identities=11% Similarity=0.160 Sum_probs=89.0
Q ss_pred ecccCc-eEEEe-eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecccceEEEEe
Q 047869 1815 SVSSRG-RLAVG-EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYEDCQVLTL 1892 (2233)
Q Consensus 1815 Sas~rG-rLAVa-EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLkDC~VLTf 1892 (2233)
+.++.| .||.+ ..+.|.|+++..--.... +.. -.-.|..++|+| ++++||+++. |-.|.-+
T Consensus 20 ~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~-------------~~~--~~~~v~~~~~~~-~~~~l~s~s~-d~~i~vw 82 (304)
T 2ynn_A 20 DFHPTEPWVLTTLYSGRVELWNYETQVEVRS-------------IQV--TETPVRAGKFIA-RKNWIIVGSD-DFRIRVF 82 (304)
T ss_dssp EECSSSSEEEEEETTSEEEEEETTTTEEEEE-------------EEC--CSSCEEEEEEEG-GGTEEEEEET-TSEEEEE
T ss_pred EECCCCCEEEEEcCCCcEEEEECCCCceeEE-------------eec--cCCcEEEEEEeC-CCCEEEEECC-CCEEEEE
Confidence 344444 45544 788999999843211111 100 112467888888 6778877665 4444444
Q ss_pred cC-CCceeeeeeeeeccCCceEEEeEEecCCCceEEEEec-CeEEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEecCCcE
Q 047869 1893 NP-RGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTN-KFVKIYDLSQDNISPLHYFTLPDDMIVDATLVIASRGKM 1970 (2233)
Q Consensus 1893 ss-~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~-~FVKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~ 1970 (2233)
+. .|+..- .+.--...|..+.|-|..+. |+.... ..|||||+.... .+...|.--.+.|..++|- +.+..
T Consensus 83 d~~~~~~~~----~~~~h~~~v~~~~~~~~~~~-l~sgs~D~~v~lWd~~~~~-~~~~~~~~h~~~v~~v~~~--p~~~~ 154 (304)
T 2ynn_A 83 NYNTGEKVV----DFEAHPDYIRSIAVHPTKPY-VLSGSDDLTVKLWNWENNW-ALEQTFEGHEHFVMCVAFN--PKDPS 154 (304)
T ss_dssp ETTTCCEEE----EEECCSSCEEEEEECSSSSE-EEEEETTSCEEEEEGGGTT-EEEEEECCCCSCEEEEEEC--TTCTT
T ss_pred ECCCCcEEE----EEeCCCCcEEEEEEcCCCCE-EEEECCCCeEEEEECCCCc-chhhhhcccCCcEEEEEEC--CCCCC
Confidence 32 333322 22223577999999999765 444444 489999997542 2334444456667766643 43335
Q ss_pred EEEEEecCCceEEEEecc
Q 047869 1971 FLIVLSECGSLYRLELSV 1988 (2233)
Q Consensus 1971 ~ILVLSS~G~LY~Qels~ 1988 (2233)
.++.-+.+|.|..-++..
T Consensus 155 ~l~sgs~D~~v~iwd~~~ 172 (304)
T 2ynn_A 155 TFASGCLDRTVKVWSLGQ 172 (304)
T ss_dssp EEEEEETTSEEEEEETTC
T ss_pred EEEEEeCCCeEEEEECCC
Confidence 778889999999888753
No 117
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=94.90 E-value=5.6 Score=44.23 Aligned_cols=149 Identities=11% Similarity=0.105 Sum_probs=89.6
Q ss_pred EEEEeecccCccceEEeecccceEEEEecC-CCceeeeeeeeeccCCceEEEeEEecCCCceEEEEec-CeEEEEeCcCC
Q 047869 1865 EIVHLAFNSIVENYLTVAGYEDCQVLTLNP-RGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTN-KFVKIYDLSQD 1942 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGLkDC~VLTfss-~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~-~FVKIYDLS~D 1942 (2233)
.|..++|+| ++.+||.+| .|..|.-++- .|+....+ .--...|..+.|-|..+. |+.... ..|+|||+...
T Consensus 78 ~V~~~~~~~-~~~~l~s~s-~D~~v~lwd~~~~~~~~~~----~~h~~~v~~v~~sp~~~~-l~s~~~d~~i~~wd~~~~ 150 (343)
T 2xzm_R 78 FVSDLALSQ-ENCFAISSS-WDKTLRLWDLRTGTTYKRF----VGHQSEVYSVAFSPDNRQ-ILSAGAEREIKLWNILGE 150 (343)
T ss_dssp CEEEEEECS-STTEEEEEE-TTSEEEEEETTSSCEEEEE----ECCCSCEEEEEECSSTTE-EEEEETTSCEEEEESSSC
T ss_pred ceEEEEECC-CCCEEEEEc-CCCcEEEEECCCCcEEEEE----cCCCCcEEEEEECCCCCE-EEEEcCCCEEEEEeccCC
Confidence 478899998 566777655 4545554543 34333222 122457999999998765 554544 48999999632
Q ss_pred CCCCcEEEEc-----CCCCeeEEEEEEecCC---------cEEEEEEecCCceEEEEecccCCCccccceeeeecccccc
Q 047869 1943 NISPLHYFTL-----PDDMIVDATLVIASRG---------KMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREI 2008 (2233)
Q Consensus 1943 ~lSPvyyF~L-----psGkIrDaTfv~~e~G---------~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~ 2008 (2233)
. .+.. ..+.|..+.|- +.+ ..+++..+.+|.|+.-+.. . .....++ . -
T Consensus 151 ~-----~~~~~~~~~~~~~v~~~~~~--~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~--~-----~~~~~~~--~--h 212 (343)
T 2xzm_R 151 C-----KFSSAEKENHSDWVSCVRYS--PIMKSANKVQPFAPYFASVGWDGRLKVWNTN--F-----QIRYTFK--A--H 212 (343)
T ss_dssp E-----EEECCTTTSCSSCEEEEEEC--CCCCSCSCCCSSCCEEEEEETTSEEEEEETT--T-----EEEEEEE--C--C
T ss_pred c-----eeeeecccCCCceeeeeeec--cccccccccCCCCCEEEEEcCCCEEEEEcCC--C-----ceeEEEc--C--c
Confidence 1 2222 23346655543 333 1467888899999876622 1 0001111 1 1
Q ss_pred cCCeEEEEeccccceeeEEecCCcEEEEEc
Q 047869 2009 HAKGLSLYFSSTYKLLFLSFQDGTTLVGRL 2038 (2233)
Q Consensus 2009 ~~~GVSVyYS~tl~LLF~SY~~G~Sf~a~L 2038 (2233)
.+.-.++.||++-++|...-.+|+..+=.+
T Consensus 213 ~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~ 242 (343)
T 2xzm_R 213 ESNVNHLSISPNGKYIATGGKDKKLLIWDI 242 (343)
T ss_dssp SSCEEEEEECTTSSEEEEEETTCEEEEEES
T ss_pred cccceEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 233457889998888888888888877665
No 118
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=94.89 E-value=6.2 Score=48.49 Aligned_cols=180 Identities=13% Similarity=0.149 Sum_probs=105.6
Q ss_pred CceEEEe-eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecccceEEEEecCCCc
Q 047869 1819 RGRLAVG-EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYEDCQVLTLNPRGE 1897 (2233)
Q Consensus 1819 rGrLAVa-EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLkDC~VLTfss~Ge 1897 (2233)
+.+||.+ ..+.|.|+++..--.... +. .-.-.|.+++|+| ++++||.+| .|-.|.-++..|.
T Consensus 442 g~~l~sgs~Dg~v~vwd~~~~~~~~~-------------~~--~h~~~v~~~~~s~-~~~~l~s~s-~D~~i~iwd~~~~ 504 (694)
T 3dm0_A 442 GQFALSGSWDGELRLWDLAAGVSTRR-------------FV--GHTKDVLSVAFSL-DNRQIVSAS-RDRTIKLWNTLGE 504 (694)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEE-------------EE--CCSSCEEEEEECT-TSSCEEEEE-TTSCEEEECTTSC
T ss_pred CCEEEEEeCCCcEEEEECCCCcceeE-------------Ee--CCCCCEEEEEEeC-CCCEEEEEe-CCCEEEEEECCCC
Confidence 4455554 778899999853211111 11 1122478999998 566776655 4556666665554
Q ss_pred eeeeeeeeeccCCceEEEeEEecCCC-ceEEEEecC-eEEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEE
Q 047869 1898 VTDRLAIELALQGAYIRRVDWVPGSP-VQLMVVTNK-FVKIYDLSQDNISPLHYFTLPDDMIVDATLVIASRGKMFLIVL 1975 (2233)
Q Consensus 1898 V~DRL~LeL~Leg~fIIKa~WLPGSQ-t~LAVVT~~-FVKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVL 1975 (2233)
..-.+.....-....|..+.|-|... ..|+....+ .|+|||+.... +...+.--.+.|..++| .++|. +++.-
T Consensus 505 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~--~~~~~~~h~~~v~~v~~--spdg~-~l~sg 579 (694)
T 3dm0_A 505 CKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK--LRSTLAGHTGYVSTVAV--SPDGS-LCASG 579 (694)
T ss_dssp EEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCC--EEEEECCCSSCEEEEEE--CTTSS-EEEEE
T ss_pred cceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCc--EEEEEcCCCCCEEEEEE--eCCCC-EEEEE
Confidence 32221111111245799999999864 345554444 89999997543 34445545677877774 35664 67778
Q ss_pred ecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccceeeEEecCC
Q 047869 1976 SECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSFQDG 2031 (2233)
Q Consensus 1976 SS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY~~G 2031 (2233)
+.+|.|..-++..... ..... ....-.++.+|+.-.+|..+..+|
T Consensus 580 ~~Dg~i~iwd~~~~~~--------~~~~~---~~~~v~~~~~sp~~~~l~~~~~~~ 624 (694)
T 3dm0_A 580 GKDGVVLLWDLAEGKK--------LYSLE---ANSVIHALCFSPNRYWLCAATEHG 624 (694)
T ss_dssp ETTSBCEEEETTTTEE--------EECCB---CSSCEEEEEECSSSSEEEEEETTE
T ss_pred eCCCeEEEEECCCCce--------EEEec---CCCcEEEEEEcCCCcEEEEEcCCC
Confidence 8999999888763210 01111 123345677888777666655443
No 119
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=94.76 E-value=3.5 Score=50.36 Aligned_cols=76 Identities=12% Similarity=0.120 Sum_probs=46.4
Q ss_pred ceecccC-ceEEEe-eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccC---ccceEEeecccce
Q 047869 1813 LLSVSSR-GRLAVG-EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSI---VENYLTVAGYEDC 1887 (2233)
Q Consensus 1813 LLSas~r-GrLAVa-EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~---nEdyLAVcGLkDC 1887 (2233)
.+..+.. ++|+++ +++.|.++++.. .+ .+.+..-+++-.+.+++|+|. ++++|+|.++.+-
T Consensus 183 ~v~~spdg~~l~v~~~d~~V~v~D~~~----~t----------~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~ 248 (543)
T 1nir_A 183 ISRMSASGRYLLVIGRDARIDMIDLWA----KE----------PTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPP 248 (543)
T ss_dssp EEEECTTSCEEEEEETTSEEEEEETTS----SS----------CEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESS
T ss_pred eEEECCCCCEEEEECCCCeEEEEECcC----CC----------CcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEccCC
Confidence 3444544 457765 779999999820 11 112223334556789999984 7899999998666
Q ss_pred EEEEec-CCCceeeee
Q 047869 1888 QVLTLN-PRGEVTDRL 1902 (2233)
Q Consensus 1888 ~VLTfs-s~GeV~DRL 1902 (2233)
.|--++ ..+++..++
T Consensus 249 ~v~v~D~~t~~~~~~i 264 (543)
T 1nir_A 249 QFAIMDGETLEPKQIV 264 (543)
T ss_dssp EEEEEETTTCCEEEEE
T ss_pred eEEEEeccccccceee
Confidence 655553 334444433
No 120
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=94.67 E-value=6.3 Score=44.38 Aligned_cols=187 Identities=13% Similarity=0.107 Sum_probs=106.1
Q ss_pred eeccc-CceEEEe--eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecc------
Q 047869 1814 LSVSS-RGRLAVG--EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGY------ 1884 (2233)
Q Consensus 1814 LSas~-rGrLAVa--EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGL------ 1884 (2233)
++.+. ++++++. ..+.|.++++..-- .. ..-..+-.+.+++++| ++++|++++.
T Consensus 217 ~~~~~~~~~l~~~~~~~~~i~~~d~~~~~-----------~~-----~~~~~~~~~~~~~~~~-~g~~l~~~~~~~~~~~ 279 (433)
T 3bws_A 217 LLYDPIRDLVYCSNWISEDISVIDRKTKL-----------EI-----RKTDKIGLPRGLLLSK-DGKELYIAQFSASNQE 279 (433)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTTTE-----------EE-----EECCCCSEEEEEEECT-TSSEEEEEEEESCTTC
T ss_pred EEEcCCCCEEEEEecCCCcEEEEECCCCc-----------EE-----EEecCCCCceEEEEcC-CCCEEEEEECCCCccc
Confidence 34444 3456443 57899999874210 00 0011123478999998 6678888886
Q ss_pred -cceEEEEecC-CCceeeeeeeeeccCCceEEEeEEecCCCceEEEEe-cCeEEEEeCcCCCCCCcEEEEcCCCCeeEEE
Q 047869 1885 -EDCQVLTLNP-RGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVT-NKFVKIYDLSQDNISPLHYFTLPDDMIVDAT 1961 (2233)
Q Consensus 1885 -kDC~VLTfss-~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT-~~FVKIYDLS~D~lSPvyyF~LpsGkIrDaT 1961 (2233)
.|-.|..++. +|++...+. . +..+..+.|-|..+..++..+ ...|+|||+.... +...+. ..+.+..++
T Consensus 280 ~~dg~i~~~d~~~~~~~~~~~----~-~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~--~~~~~~-~~~~~~~~~ 351 (433)
T 3bws_A 280 SGGGRLGIYSMDKEKLIDTIG----P-PGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKK--VQKSIP-VFDKPNTIA 351 (433)
T ss_dssp SCCEEEEEEETTTTEEEEEEE----E-EECEEEEEECSSTTEEEEEETTTTEEEEEETTTTE--EEEEEE-CSSSEEEEE
T ss_pred cCCCeEEEEECCCCcEEeecc----C-CCCcceEEECCCCCEEEEEecCCCEEEEEECCCCc--EEEEec-CCCCCCeEE
Confidence 3556666664 444433321 1 236778899998766444433 4489999998443 333343 234566544
Q ss_pred EEEecCCcEEEEEEec--------------CCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccceeeEE
Q 047869 1962 LVIASRGKMFLIVLSE--------------CGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLS 2027 (2233)
Q Consensus 1962 fv~~e~G~~~ILVLSS--------------~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~S 2027 (2233)
+.++|+...+.... +|.||.-++.. + .....+. . ...-.++.++++-+.|+++
T Consensus 352 --~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~-~-----~~~~~~~--~---~~~~~~~~~s~dg~~l~~~ 418 (433)
T 3bws_A 352 --LSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT-D-----TVKEFWE--A---GNQPTGLDVSPDNRYLVIS 418 (433)
T ss_dssp --ECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT-T-----EEEEEEE--C---SSSEEEEEECTTSCEEEEE
T ss_pred --EcCCCCEEEEEecCCCccccccccccccceEEEEEECCC-C-----cEEEEec--C---CCCCceEEEcCCCCEEEEE
Confidence 34677644333333 46888766542 1 0111111 1 2234577889998888887
Q ss_pred ec-CCcEEEEEc
Q 047869 2028 FQ-DGTTLVGRL 2038 (2233)
Q Consensus 2028 Y~-~G~Sf~a~L 2038 (2233)
-. +|+..+-.+
T Consensus 419 ~~~d~~i~v~~~ 430 (433)
T 3bws_A 419 DFLDHQIRVYRR 430 (433)
T ss_dssp ETTTTEEEEEEE
T ss_pred ECCCCeEEEEEe
Confidence 64 777666554
No 121
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=94.42 E-value=7.7 Score=43.04 Aligned_cols=182 Identities=14% Similarity=0.061 Sum_probs=100.6
Q ss_pred ceEEE-eeCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecccceEEEEecCCCce
Q 047869 1820 GRLAV-GEGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYEDCQVLTLNPRGEV 1898 (2233)
Q Consensus 1820 GrLAV-aEgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLkDC~VLTfss~GeV 1898 (2233)
.++|. ++.+.|.|+++..-- ...++. .-.|.++.++|. .+.|-.|..|.-++.++.+
T Consensus 49 ~~l~sg~~Dg~v~iwd~~~~~--------~~~~~~---------~~~v~~~~~~~~-----~~s~s~D~~i~~w~~~~~~ 106 (343)
T 3lrv_A 49 WVCMCRCEDGALHFTQLKDSK--------TITTIT---------TPNPRTGGEHPA-----IISRGPCNRLLLLYPGNQI 106 (343)
T ss_dssp EEEEEEEETTEEEEEEESSSS--------CEEEEE---------EECCCTTCCCCS-----EEEECSTTEEEEEETTTEE
T ss_pred CEEEEECCCCcEEEEECCCCc--------EEEEEe---------cCCceeeeeCCc-----eEEecCCCeEEEEEccCce
Confidence 34444 388889888873210 001111 122346667775 5555667777777666654
Q ss_pred e--e----eeeeeeccC-CceEEEeEEec--CCCceEEEEecC-eEEEEeCcCCCCCCcEEEEcC-CCCeeEEEEEEecC
Q 047869 1899 T--D----RLAIELALQ-GAYIRRVDWVP--GSPVQLMVVTNK-FVKIYDLSQDNISPLHYFTLP-DDMIVDATLVIASR 1967 (2233)
Q Consensus 1899 ~--D----RL~LeL~Le-g~fIIKa~WLP--GSQt~LAVVT~~-FVKIYDLS~D~lSPvyyF~Lp-sGkIrDaTfv~~e~ 1967 (2233)
. | +..-..... ..-|..+.|-| ..+. ++..+.+ .|+|||+..... ...+... .+.|..++| .++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-l~s~s~dg~i~~wd~~~~~~--~~~~~~~~~~~i~~~~~--~pd 181 (343)
T 3lrv_A 107 TILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEY-FIWADNRGTIGFQSYEDDSQ--YIVHSAKSDVEYSSGVL--HKD 181 (343)
T ss_dssp EEEETTTCCEEEEEECCCSSCEEEEECCC---CCE-EEEEETTCCEEEEESSSSCE--EEEECCCSSCCCCEEEE--CTT
T ss_pred EEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCE-EEEEeCCCcEEEEECCCCcE--EEEEecCCCCceEEEEE--CCC
Confidence 1 1 111111122 35699999999 5443 5555544 999999986653 2223222 234666654 466
Q ss_pred CcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccceeeEEecCCcEEEEEc
Q 047869 1968 GKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSFQDGTTLVGRL 2038 (2233)
Q Consensus 1968 G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY~~G~Sf~a~L 2038 (2233)
|. +++.-+.+|.|+.-++...... ...++ . .-.+.-.+|.|++.-+.|..+- +|+..+=.+
T Consensus 182 g~-~lasg~~dg~i~iwd~~~~~~~-----~~~~~--~-~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~ 242 (343)
T 3lrv_A 182 SL-LLALYSPDGILDVYNLSSPDQA-----SSRFP--V-DEEAKIKEVKFADNGYWMVVEC-DQTVVCFDL 242 (343)
T ss_dssp SC-EEEEECTTSCEEEEESSCTTSC-----CEECC--C-CTTSCEEEEEECTTSSEEEEEE-SSBEEEEET
T ss_pred CC-EEEEEcCCCEEEEEECCCCCCC-----ccEEe--c-cCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEc
Confidence 74 5666789999999888732211 00111 1 0123456788888877776666 555544444
No 122
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=94.36 E-value=2.2 Score=52.23 Aligned_cols=120 Identities=16% Similarity=0.239 Sum_probs=82.8
Q ss_pred EEEEeecccC-----ccceEEeeccc-ceEEEEecCCCceee-eee-----eeeccCCceEEEeEEecCCCceEEEEecC
Q 047869 1865 EIVHLAFNSI-----VENYLTVAGYE-DCQVLTLNPRGEVTD-RLA-----IELALQGAYIRRVDWVPGSPVQLMVVTNK 1932 (2233)
Q Consensus 1865 eVlsLafNP~-----nEdyLAVcGLk-DC~VLTfss~GeV~D-RL~-----LeL~Leg~fIIKa~WLPGSQt~LAVVT~~ 1932 (2233)
.|.+|+|+|. +.++||.+|.. -+.|..+........ ... ..+......|..+.|-|+. .||..+.+
T Consensus 209 ~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~--~lasgs~D 286 (524)
T 2j04_B 209 EVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT--TVVCGFKN 286 (524)
T ss_dssp SEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS--EEEEEETT
T ss_pred cEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC--eEEEEeCC
Confidence 3788999996 35788888765 466666643321100 001 1122235779999999864 57777775
Q ss_pred -eEEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEec
Q 047869 1933 -FVKIYDLSQDNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELS 1987 (2233)
Q Consensus 1933 -FVKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels 1987 (2233)
.|+|||+... -.|...+..-.+.|.++++.+..+|..+++-.|.+|.+..=++.
T Consensus 287 gtV~lWD~~~~-~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~ 341 (524)
T 2j04_B 287 GFVAEFDLTDP-EVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPK 341 (524)
T ss_dssp SEEEEEETTBC-SSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGG
T ss_pred CEEEEEECCCC-CCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECC
Confidence 9999999854 34777788788899998755566664577788899999887776
No 123
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=94.35 E-value=13 Score=45.44 Aligned_cols=183 Identities=11% Similarity=0.127 Sum_probs=110.0
Q ss_pred cccCceEEEe--eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecccceEEEEec
Q 047869 1816 VSSRGRLAVG--EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYEDCQVLTLN 1893 (2233)
Q Consensus 1816 as~rGrLAVa--EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLkDC~VLTfs 1893 (2233)
.+..|+++|. ..+.|.+++.... +.+..-+++..+..++|+| ++++|+|++.. -.|..++
T Consensus 145 ~~p~~~~~vs~~~d~~V~v~D~~t~----------------~~~~~i~~g~~~~~v~~sp-dg~~l~v~~~d-~~V~v~D 206 (543)
T 1nir_A 145 LDLPNLFSVTLRDAGQIALVDGDSK----------------KIVKVIDTGYAVHISRMSA-SGRYLLVIGRD-ARIDMID 206 (543)
T ss_dssp CCGGGEEEEEEGGGTEEEEEETTTC----------------CEEEEEECSTTEEEEEECT-TSCEEEEEETT-SEEEEEE
T ss_pred cCCCCEEEEEEcCCCeEEEEECCCc----------------eEEEEEecCcccceEEECC-CCCEEEEECCC-CeEEEEE
Confidence 4456676664 5678999876321 1122223344577899999 88899999875 4555555
Q ss_pred C---CCceeeeeeeeeccCCceEEEeEEec----CCCceEEEEe--cCeEEEEeCcCCCCCCcEEEEcCC----------
Q 047869 1894 P---RGEVTDRLAIELALQGAYIRRVDWVP----GSPVQLMVVT--NKFVKIYDLSQDNISPLHYFTLPD---------- 1954 (2233)
Q Consensus 1894 s---~GeV~DRL~LeL~Leg~fIIKa~WLP----GSQt~LAVVT--~~FVKIYDLS~D~lSPvyyF~Lps---------- 1954 (2233)
. .|++..++. .|...+.+.+=| ..+. |+++. ...|+|||.. ...|+..+.+..
T Consensus 207 ~~~~t~~~~~~i~-----~g~~p~~va~sp~~~~dg~~-l~v~~~~~~~v~v~D~~--t~~~~~~i~~~g~~~~~~~~~~ 278 (543)
T 1nir_A 207 LWAKEPTKVAEIK-----IGIEARSVESSKFKGYEDRY-TIAGAYWPPQFAIMDGE--TLEPKQIVSTRGMTVDTQTYHP 278 (543)
T ss_dssp TTSSSCEEEEEEE-----CCSEEEEEEECCSTTCTTTE-EEEEEEESSEEEEEETT--TCCEEEEEECCEECSSSCCEES
T ss_pred CcCCCCcEEEEEe-----cCCCcceEEeCCCcCCCCCE-EEEEEccCCeEEEEecc--ccccceeecccCcccCcccccc
Confidence 4 566554443 266788888888 5443 44443 4689999975 466776666521
Q ss_pred -CCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccceeeEEec-CCc
Q 047869 1955 -DMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSFQ-DGT 2032 (2233)
Q Consensus 1955 -GkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY~-~G~ 2032 (2233)
..+ ..+.+..+|..+++-.+.+|.|..=++.... . ...+ .+ +.+ ..-..+.++++-+.++++-. +++
T Consensus 279 ~~~v--~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~-~--l~~~-~i--~~~---~~~~~~~~spdg~~l~va~~~~~~ 347 (543)
T 1nir_A 279 EPRV--AAIIASHEHPEFIVNVKETGKVLLVNYKDID-N--LTVT-SI--GAA---PFLHDGGWDSSHRYFMTAANNSNK 347 (543)
T ss_dssp CCCE--EEEEECSSSSEEEEEETTTTEEEEEECTTSS-S--CEEE-EE--ECC---SSCCCEEECTTSCEEEEEEGGGTE
T ss_pred CCce--EEEEECCCCCEEEEEECCCCeEEEEEecCCC-c--ceeE-Ee--ccC---cCccCceECCCCCEEEEEecCCCe
Confidence 122 3444556777888888889999877765321 1 1111 11 111 11223578888888877654 455
Q ss_pred EEE
Q 047869 2033 TLV 2035 (2233)
Q Consensus 2033 Sf~ 2035 (2233)
..+
T Consensus 348 v~v 350 (543)
T 1nir_A 348 VAV 350 (543)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 124
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=94.23 E-value=7.5 Score=43.12 Aligned_cols=160 Identities=12% Similarity=0.131 Sum_probs=91.5
Q ss_pred EEEEeecccC-ccceEEeeccc-ceEEEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEec-CeEEEEeCcC
Q 047869 1865 EIVHLAFNSI-VENYLTVAGYE-DCQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTN-KFVKIYDLSQ 1941 (2233)
Q Consensus 1865 eVlsLafNP~-nEdyLAVcGLk-DC~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~-~FVKIYDLS~ 1941 (2233)
.|..++++|. ++++||.+|.. .+.+.-+. .|.. +.+.....+..|..+.|-|..+. ||..+. ..|+|||+..
T Consensus 127 ~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~-~~~~---~~~~~~~~~~~i~~~~~~pdg~~-lasg~~dg~i~iwd~~~ 201 (343)
T 3lrv_A 127 EIIYMYGHNEVNTEYFIWADNRGTIGFQSYE-DDSQ---YIVHSAKSDVEYSSGVLHKDSLL-LALYSPDGILDVYNLSS 201 (343)
T ss_dssp CEEEEECCC---CCEEEEEETTCCEEEEESS-SSCE---EEEECCCSSCCCCEEEECTTSCE-EEEECTTSCEEEEESSC
T ss_pred CEEEEEcCCCCCCCEEEEEeCCCcEEEEECC-CCcE---EEEEecCCCCceEEEEECCCCCE-EEEEcCCCEEEEEECCC
Confidence 5889999993 56777777743 34555543 3332 11111112345889999997654 665454 4999999986
Q ss_pred CCCCCcEEEEc-CCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccc
Q 047869 1942 DNISPLHYFTL-PDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSST 2020 (2233)
Q Consensus 1942 D~lSPvyyF~L-psGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~t 2020 (2233)
...-+ ..|.. -.+.|...+| .++|. +++..+ +|.|+.-++........... ......... +.++.++++
T Consensus 202 ~~~~~-~~~~~~h~~~v~~l~f--s~~g~-~l~s~~-~~~v~iwd~~~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~ 271 (343)
T 3lrv_A 202 PDQAS-SRFPVDEEAKIKEVKF--ADNGY-WMVVEC-DQTVVCFDLRKDVGTLAYPT---YTIPEFKTG--TVTYDIDDS 271 (343)
T ss_dssp TTSCC-EECCCCTTSCEEEEEE--CTTSS-EEEEEE-SSBEEEEETTSSTTCBSSCC---CBC-----C--CEEEEECTT
T ss_pred CCCCc-cEEeccCCCCEEEEEE--eCCCC-EEEEEe-CCeEEEEEcCCCCcceeecc---ccccccccc--ceEEEECCC
Confidence 65322 45555 4678888775 46674 444444 77999888874322111110 000111111 256888888
Q ss_pred cceeeEEec-CCcEEEEEcC
Q 047869 2021 YKLLFLSFQ-DGTTLVGRLS 2039 (2233)
Q Consensus 2021 l~LLF~SY~-~G~Sf~a~Ls 2039 (2233)
-++|...-. +|+..+-.++
T Consensus 272 g~~l~~~s~~d~~i~v~~~~ 291 (343)
T 3lrv_A 272 GKNMIAYSNESNSLTIYKFD 291 (343)
T ss_dssp SSEEEEEETTTTEEEEEEEC
T ss_pred CCEEEEecCCCCcEEEEEEc
Confidence 887777665 6665555543
No 125
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=94.19 E-value=10 Score=43.47 Aligned_cols=117 Identities=9% Similarity=0.110 Sum_probs=71.8
Q ss_pred EEEeecccCccceEEeeccc-ceEEEEecCCCceeeeeeeeeccC--CceEEEeEEecCC-------CceEEEEecC-eE
Q 047869 1866 IVHLAFNSIVENYLTVAGYE-DCQVLTLNPRGEVTDRLAIELALQ--GAYIRRVDWVPGS-------PVQLMVVTNK-FV 1934 (2233)
Q Consensus 1866 VlsLafNP~nEdyLAVcGLk-DC~VLTfss~GeV~DRL~LeL~Le--g~fIIKa~WLPGS-------Qt~LAVVT~~-FV 1934 (2233)
..++.++|...++||.++-. .+.+...... +......+ -.+. ..+|..+.|-|.. ...||-+..| .|
T Consensus 91 ~~~~~~~~~~~~~las~~~d~~v~lw~~~~~-~~~~~~~~-~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv 168 (393)
T 4gq1_A 91 DGNVNSSPVYSLFLACVCQDNTVRLIITKNE-TIITQHVL-GGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTL 168 (393)
T ss_dssp ------CCEEEEEEEEEETTSCEEEEEEETT-EEEEEEEE-CTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEE
T ss_pred CcceeecCCCCCEEEEEeCCCcEEEEECCCC-ccceeeee-cccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeE
Confidence 34556667778888877643 3445554333 22222222 2233 5789999999832 2356655555 89
Q ss_pred EEEeCcCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecc
Q 047869 1935 KIYDLSQDNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSV 1988 (2233)
Q Consensus 1935 KIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~ 1988 (2233)
||||+.... |...+.--.+.|..++| .++|..+++..+.+|.|..-++..
T Consensus 169 ~~Wd~~~~~--~~~~~~~~~~~v~~v~~--~p~~~~~l~~~~~d~~v~~wd~~t 218 (393)
T 4gq1_A 169 IIWRLTDEG--PILAGYPLSSPGISVQF--RPSNPNQLIVGERNGNIRIFDWTL 218 (393)
T ss_dssp EEEEEETTE--EEEEEEECSSCEEEEEE--ETTEEEEEEEEETTSEEEEEETTC
T ss_pred EEEECCCCc--eeeeecCCCCCcEEEEE--CCCCCceEEecCCCCEEEEEECCC
Confidence 999997543 44555445667876664 467777899999999999888763
No 126
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=94.18 E-value=14 Score=45.03 Aligned_cols=191 Identities=12% Similarity=0.109 Sum_probs=114.9
Q ss_pred ceecccC-ceEEEeeCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeeccc-ceEEE
Q 047869 1813 LLSVSSR-GRLAVGEGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYE-DCQVL 1890 (2233)
Q Consensus 1813 LLSas~r-GrLAVaEgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLk-DC~VL 1890 (2233)
.++.++. ++||.+-++.|.|.++..--.+ .+++ -. .-.|..++|+| +++|||.++.. .+.|.
T Consensus 23 ~~~~spdg~~l~~~~~~~v~l~~~~~~~~~----------~~~~---~h--~~~v~~~~~sp-dg~~lasg~~d~~v~lW 86 (611)
T 1nr0_A 23 VLGNTPAGDKIQYCNGTSVYTVPVGSLTDT----------EIYT---EH--SHQTTVAKTSP-SGYYCASGDVHGNVRIW 86 (611)
T ss_dssp CCEECTTSSEEEEEETTEEEEEETTCSSCC----------EEEC---CC--SSCEEEEEECT-TSSEEEEEETTSEEEEE
T ss_pred EEeeCCCCCEEEeCCCCEEEEecCCCcccC----------eEec---CC--CCceEEEEECC-CCcEEEEEeCCCCEEEe
Confidence 3455554 4688887889999887421101 1111 01 12477899999 78899988863 24444
Q ss_pred EecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-----eEEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEe
Q 047869 1891 TLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-----FVKIYDLSQDNISPLHYFTLPDDMIVDATLVIA 1965 (2233)
Q Consensus 1891 Tfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-----FVKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~ 1965 (2233)
-+.. |+-. +...+.--..-|..+.|-|..+. ||.+..+ .|++||... +...+.-..+.|..++| .
T Consensus 87 d~~~-~~~~--~~~~~~~~~~~v~~v~fs~dg~~-l~~~~~~~~~~~~v~~wd~~~----~~~~l~gh~~~v~~v~f--~ 156 (611)
T 1nr0_A 87 DTTQ-TTHI--LKTTIPVFSGPVKDISWDSESKR-IAAVGEGRERFGHVFLFDTGT----SNGNLTGQARAMNSVDF--K 156 (611)
T ss_dssp ESSS-TTCC--EEEEEECSSSCEEEEEECTTSCE-EEEEECCSSCSEEEEETTTCC----BCBCCCCCSSCEEEEEE--C
T ss_pred ECCC-Ccce--eeEeecccCCceEEEEECCCCCE-EEEEECCCCceeEEEEeeCCC----CcceecCCCCCceEEEE--C
Confidence 4422 2211 11122222456999999999865 5555543 588887432 33444445677888775 4
Q ss_pred cCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccceeeEEecCCcEEEEEcC
Q 047869 1966 SRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSFQDGTTLVGRLS 2039 (2233)
Q Consensus 1966 e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY~~G~Sf~a~Ls 2039 (2233)
++|...++.-|.+|.+..-+... + ....++ .+ -.+.-.++-||++-++|...-.+|+..+=.+.
T Consensus 157 p~~~~~l~s~s~D~~v~lwd~~~----~--~~~~~l--~~--H~~~V~~v~fspdg~~las~s~D~~i~lwd~~ 220 (611)
T 1nr0_A 157 PSRPFRIISGSDDNTVAIFEGPP----F--KFKSTF--GE--HTKFVHSVRYNPDGSLFASTGGDGTIVLYNGV 220 (611)
T ss_dssp SSSSCEEEEEETTSCEEEEETTT----B--EEEEEE--CC--CSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCCCeEEEEEeCCCeEEEEECCC----C--eEeeee--cc--ccCceEEEEECCCCCEEEEEECCCcEEEEECC
Confidence 66777788899999998776431 1 111111 11 12334578899998888888888887776653
No 127
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=94.10 E-value=6.8 Score=49.73 Aligned_cols=229 Identities=11% Similarity=0.066 Sum_probs=123.4
Q ss_pred cceEEEEecCCCceeeee-eee-----eccC---CceEEEeEEecCCCceEEEEecC-eEEEEeCcCCCCCCcEEEE---
Q 047869 1885 EDCQVLTLNPRGEVTDRL-AIE-----LALQ---GAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQDNISPLHYFT--- 1951 (2233)
Q Consensus 1885 kDC~VLTfss~GeV~DRL-~Le-----L~Le---g~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D~lSPvyyF~--- 1951 (2233)
+++.-+.|+|.| .++. .++ ..++ ..+|..+.|=|..+. ||+.+++ -|+|||... ....+.
T Consensus 53 ~~v~~V~FsPdg--~~~~~~~~~~~~~~~~~~~~~~~V~~vawSPdG~~-LAs~s~dg~V~iwd~~~----~l~~l~~~~ 125 (588)
T 2j04_A 53 KNLFHVKEFPLE--FENKLDFELAQQNGLLNSQPVCYPRVCKPSPIDDW-MAVLSNNGNVSVFKDNK----MLTNLDSKG 125 (588)
T ss_dssp GGTEEEEEECCC--CCCTTTTSCCCSSCSSTTSCSCCEEEEEECSSSSC-EEEEETTSCEEEEETTE----EEEECCCSS
T ss_pred ccEEEEEECCCC--CcceEEEEeCCCceEeecCCCCcEEEEEECCCCCE-EEEEeCCCcEEEEeCCc----eeeeccCCC
Confidence 344568888988 3332 111 1111 679999999998876 7777777 899999533 222222
Q ss_pred -cCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccC-CCccccceeeeecccccccCCeEEEEeccccceeeEEec
Q 047869 1952 -LPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEG-NVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSFQ 2029 (2233)
Q Consensus 1952 -LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~-d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY~ 2029 (2233)
+++..|++++| .++|+ ++.+.+.+|.|-.-++.... ....+++..+++.....-.+.-.++-||++- |..+=.
T Consensus 126 ~~~~~sv~svaf--SPDG~-~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~ 200 (588)
T 2j04_A 126 NLSSRTYHCFEW--NPIES-SIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALS 200 (588)
T ss_dssp CSTTTCEEEEEE--CSSSS-CEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEET
T ss_pred ccccccEEEEEE--cCCCC-EEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeC
Confidence 22334776664 57775 78888999999988876321 1112233444332221123457788888876 334434
Q ss_pred CCcEEEEEcCCCcccccceeEEEEccCCCCCCCcccceeeccCCCceEEEEeccCCCceEEEEecCCceeeeccccccCC
Q 047869 2030 DGTTLVGRLSPNAASLSEVSYVFEEQDGKLRSAGLHRWKELLASSGLFFCFSSLKSNAAVAVSLGTNELIAQNMRHAAGS 2109 (2233)
Q Consensus 2030 ~G~Sf~a~Ls~~~~sv~eis~Vfe~~~gk~~~a~L~qWsEV~~hPGLf~cls~~~sn~pvvv~l~pd~I~iQeiK~~~~s 2109 (2233)
+++..+=.+.... ..++...... ....... -..|+ + +.+++ +. ++..-+.-+.+..+..-...+
T Consensus 201 D~tVrlWd~~~~~--~~~~~~tL~~-~h~~~V~-svaFs---g--~~LAS-a~--~~tIkLWd~~~~~~~~~~~gh---- 264 (588)
T 2j04_A 201 NNSVFSMTVSASS--HQPVSRMIQN-ASRRKIT-DLKIV---D--YKVVL-TC--PGYVHKIDLKNYSISSLKTGS---- 264 (588)
T ss_dssp TCCEEEECCCSSS--SCCCEEEEEC-CCSSCCC-CEEEE---T--TEEEE-EC--SSEEEEEETTTTEEEEEECSC----
T ss_pred CCeEEEEECCCCc--cccceeeecc-cccCcEE-EEEEE---C--CEEEE-Ee--CCeEEEEECCCCeEEEEEcCC----
Confidence 5555554443221 1111111111 0111111 22354 2 33333 22 354444444555553433333
Q ss_pred CCCeEEEEEeecCCCCCeEEEEEeeCCceeEEecc
Q 047869 2110 TSPLVGVTAYKPLSKDKVHCLVLHDDGSLQIYSHV 2144 (2233)
Q Consensus 2110 Ss~vdgva~y~p~s~~rttlLLLcEDGSLrIYsa~ 2144 (2233)
...+-+|+.+| +.+..++++=.|||. ++|..+
T Consensus 265 ~~~V~~va~~~--s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 265 LENFHIIPLNH--EKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp CSCCCEEEETT--CSSCEEEEECSSCEE-EEEESS
T ss_pred CceEEEEEeee--CCCCCEEEEEcCCCC-EEEeec
Confidence 55556676644 566777777778999 999863
No 128
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=94.01 E-value=2.8 Score=47.77 Aligned_cols=196 Identities=15% Similarity=0.143 Sum_probs=115.3
Q ss_pred ceecccCce-EEEe---eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecccceE
Q 047869 1813 LLSVSSRGR-LAVG---EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYEDCQ 1888 (2233)
Q Consensus 1813 LLSas~rGr-LAVa---EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLkDC~ 1888 (2233)
.++.++.|+ +|++ ..+.|-|+++...-. +.++. -.-+|.+|+|+| ++++||.++-....
T Consensus 138 ~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~----------~~~~~------~~~~V~~v~fsp-dg~~l~s~s~~~~~ 200 (365)
T 4h5i_A 138 LVYISREGTVAAIASSKVPAIMRIIDPSDLTE----------KFEIE------TRGEVKDLHFST-DGKVVAYITGSSLE 200 (365)
T ss_dssp EEEECTTSSCEEEEESCSSCEEEEEETTTTEE----------EEEEE------CSSCCCEEEECT-TSSEEEEECSSCEE
T ss_pred EEEEcCCCCEEEEEECCCCCEEEEeECCCCcE----------EEEeC------CCCceEEEEEcc-CCceEEeccceeEE
Confidence 345565554 6665 345788998743211 11111 122477999999 78899998866665
Q ss_pred EEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC----eEEEEeCcCCCCCCcEEEEc--CCCCeeEEEE
Q 047869 1889 VLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK----FVKIYDLSQDNISPLHYFTL--PDDMIVDATL 1962 (2233)
Q Consensus 1889 VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~----FVKIYDLS~D~lSPvyyF~L--psGkIrDaTf 1962 (2233)
++-.. .|....+.. ..-.+..|..+.|-|..+..++..... .+++||+......+.....+ ..+.|..++|
T Consensus 201 ~~~~~-~~~~~~~~~--~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~ 277 (365)
T 4h5i_A 201 VISTV-TGSCIARKT--DFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDV 277 (365)
T ss_dssp EEETT-TCCEEEEEC--CCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEE
T ss_pred EEEec-cCcceeeee--cCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEE
Confidence 55443 333221111 111256799999999987644333333 57888887665444333333 3455665553
Q ss_pred EEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccceeeEEecCCcEEEEEcCC
Q 047869 1963 VIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSFQDGTTLVGRLSP 2040 (2233)
Q Consensus 1963 v~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY~~G~Sf~a~Ls~ 2040 (2233)
.++|+ +|..-|.+|.|+.-++.... .+. ....+. .+.--+|-||++-++|.-.=.||+.-+-.+..
T Consensus 278 --Spdg~-~lasgs~D~~V~iwd~~~~~-----~~~---~~~~gH-~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 278 --DMKGE-LAVLASNDNSIALVKLKDLS-----MSK---IFKQAH-SFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp --CTTSC-EEEEEETTSCEEEEETTTTE-----EEE---EETTSS-SSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred --CCCCC-ceEEEcCCCEEEEEECCCCc-----EEE---EecCcc-cCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 57775 67788899999987765210 000 111110 12234788999888887767788887777643
No 129
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=93.95 E-value=6.1 Score=44.96 Aligned_cols=156 Identities=10% Similarity=0.049 Sum_probs=86.3
Q ss_pred EEEeecccCccceEEeec-ccceEEEEecCC-CceeeeeeeeeccCCceEEEeEEecCCCceEEEEecCeEEEEeCcCCC
Q 047869 1866 IVHLAFNSIVENYLTVAG-YEDCQVLTLNPR-GEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNKFVKIYDLSQDN 1943 (2233)
Q Consensus 1866 VlsLafNP~nEdyLAVcG-LkDC~VLTfss~-GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~FVKIYDLS~D~ 1943 (2233)
|-.++|+| ++++||+++ -.|..|--++.+ |+..- .+..+ .-|..+.|-|..+. ||.++.+.+++|+.....
T Consensus 136 ~~~v~fSp-Dg~~la~as~~~d~~i~iwd~~~~~~~~----~~~~~-~~V~~v~fspdg~~-l~s~s~~~~~~~~~~~~~ 208 (365)
T 4h5i_A 136 TKLVYISR-EGTVAAIASSKVPAIMRIIDPSDLTEKF----EIETR-GEVKDLHFSTDGKV-VAYITGSSLEVISTVTGS 208 (365)
T ss_dssp EEEEEECT-TSSCEEEEESCSSCEEEEEETTTTEEEE----EEECS-SCCCEEEECTTSSE-EEEECSSCEEEEETTTCC
T ss_pred EEEEEEcC-CCCEEEEEECCCCCEEEEeECCCCcEEE----EeCCC-CceEEEEEccCCce-EEeccceeEEEEEeccCc
Confidence 44688988 889999864 456666666544 22221 22223 34889999998764 788889999999987654
Q ss_pred CCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCC----ceEEEEecccCCCccccceeeeecccccccCCeEEEEecc
Q 047869 1944 ISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECG----SLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSS 2019 (2233)
Q Consensus 1944 lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G----~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~ 2019 (2233)
..+.....-..+.|+.+.|- ++|+ .++..|.+| .++.-++. ... ..........+ -...-.++-||+
T Consensus 209 ~~~~~~~~~~~~~v~~v~fs--pdg~-~l~~~s~d~~~~~~i~~~~~~--~~~--~~~~~~~~~~~--~~~~V~~~~~Sp 279 (365)
T 4h5i_A 209 CIARKTDFDKNWSLSKINFI--ADDT-VLIAASLKKGKGIVLTKISIK--SGN--TSVLRSKQVTN--RFKGITSMDVDM 279 (365)
T ss_dssp EEEEECCCCTTEEEEEEEEE--ETTE-EEEEEEESSSCCEEEEEEEEE--TTE--EEEEEEEEEES--SCSCEEEEEECT
T ss_pred ceeeeecCCCCCCEEEEEEc--CCCC-EEEEEecCCcceeEEeecccc--cce--ecceeeeeecC--CCCCeEeEEECC
Confidence 32222222234456666654 5675 444444444 23322322 111 11111111111 112234678888
Q ss_pred ccceeeEEecCCcEEEEE
Q 047869 2020 TYKLLFLSFQDGTTLVGR 2037 (2233)
Q Consensus 2020 tl~LLF~SY~~G~Sf~a~ 2037 (2233)
+-++|...-.+|+..+=.
T Consensus 280 dg~~lasgs~D~~V~iwd 297 (365)
T 4h5i_A 280 KGELAVLASNDNSIALVK 297 (365)
T ss_dssp TSCEEEEEETTSCEEEEE
T ss_pred CCCceEEEcCCCEEEEEE
Confidence 887777777777655543
No 130
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=93.81 E-value=8.1 Score=41.06 Aligned_cols=148 Identities=20% Similarity=0.240 Sum_probs=87.4
Q ss_pred eecccCccceEEeecccceEEEEecC-CCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeCcCCCCCC
Q 047869 1869 LAFNSIVENYLTVAGYEDCQVLTLNP-RGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQDNISP 1946 (2233)
Q Consensus 1869 LafNP~nEdyLAVcGLkDC~VLTfss-~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D~lSP 1946 (2233)
|.++| +++|||+. |-.|.-++. +|+....+ ++.-.+..|..+.|-|..+. ||..+.+ .|+|||+..-. +
T Consensus 31 l~WS~--~~~lAvg~--D~tV~iWd~~tg~~~~~~--~~~~~~~~V~~v~~~~~~~~-l~sgs~Dg~v~iw~~~~~~--~ 101 (318)
T 4ggc_A 31 VDWSS--GNVLAVAL--DNSVYLWSASSGDILQLL--QMEQPGEYISSVAWIKEGNY-LAVGTSSAEVQLWDVQQQK--R 101 (318)
T ss_dssp EEECT--TSEEEEEE--TTEEEEEETTTCCEEEEE--ECCSTTCCEEEEEECTTSSE-EEEEETTSEEEEEETTTTE--E
T ss_pred EEECC--CCEEEEEe--CCEEEEEECCCCCEEEEE--EecCCCCeEEEEEECCCCCE-EEEEECCCcEEEeecCCce--e
Confidence 45555 35888854 556666653 46554433 22234678999999999875 5555555 89999997643 4
Q ss_pred cEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccceeeE
Q 047869 1947 LHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFL 2026 (2233)
Q Consensus 1947 vyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~ 2026 (2233)
...+.-..+.+.... ..+. .++..+.+|.+........... +. .... -...-..+.+++.-+.|+.
T Consensus 102 ~~~~~~h~~~~~~~~----~~~~-~l~s~~~~~~~~~~~~~~~~~~----~~---~~~~--~~~~~~~~~~~~~~~~l~s 167 (318)
T 4ggc_A 102 LRNMTSHSARVGSLS----WNSY-ILSSGSRSGHIHHHDVRVAEHH----VA---TLSG--HSQEVCGLRWAPDGRHLAS 167 (318)
T ss_dssp EEEEECCSSCEEEEE----EETT-EEEEEETTSEEEEEETTSSSCE----EE---EEEC--CSSCEEEEEECTTSSEEEE
T ss_pred EEEecCccceEEEee----cCCC-EEEEEecCCceEeeecCCCcee----EE---EEcC--ccCceEEEEEcCCCCEEEE
Confidence 555554455554322 2233 5667778888776655422111 00 0001 1233555677777777887
Q ss_pred EecCCcEEEEEcC
Q 047869 2027 SFQDGTTLVGRLS 2039 (2233)
Q Consensus 2027 SY~~G~Sf~a~Ls 2039 (2233)
+..+|+..+-.+.
T Consensus 168 ~~~d~~i~iwd~~ 180 (318)
T 4ggc_A 168 GGNDNLVNVWPSA 180 (318)
T ss_dssp EETTSCEEEEESS
T ss_pred EecCcceeEEECC
Confidence 7788877765553
No 131
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=93.44 E-value=3.5 Score=44.71 Aligned_cols=184 Identities=13% Similarity=0.163 Sum_probs=104.0
Q ss_pred eeccc-CceEEEee---CCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecccceEE
Q 047869 1814 LSVSS-RGRLAVGE---GDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYEDCQV 1889 (2233)
Q Consensus 1814 LSas~-rGrLAVaE---gdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLkDC~V 1889 (2233)
+..+. ++++++.. .++|.++++...-.. .+++..+. .+.+++++| ++++|+|++. +-.|
T Consensus 146 ~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~----------~~~~~~~~-----~~~~~~~s~-dg~~l~~~~~-~~~i 208 (353)
T 3vgz_A 146 LVADDATNTVYISGIGKESVIWVVDGGNIKLK----------TAIQNTGK-----MSTGLALDS-EGKRLYTTNA-DGEL 208 (353)
T ss_dssp EEEETTTTEEEEEEESSSCEEEEEETTTTEEE----------EEECCCCT-----TCCCCEEET-TTTEEEEECT-TSEE
T ss_pred EEECCCCCEEEEEecCCCceEEEEcCCCCceE----------EEecCCCC-----ccceEEECC-CCCEEEEEcC-CCeE
Confidence 44444 45577754 567989887421110 11110111 234678888 5667777665 3345
Q ss_pred EEec-CCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEec--CeEEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEec
Q 047869 1890 LTLN-PRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTN--KFVKIYDLSQDNISPLHYFTLPDDMIVDATLVIAS 1966 (2233)
Q Consensus 1890 LTfs-s~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~--~FVKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e 1966 (2233)
..++ ..|++...+.+...-...++..+.|-|..+. +.++.. ..|.+||+.... +...+.++.+ .. +.+.+
T Consensus 209 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~-l~~~~~~~~~v~~~d~~~~~--~~~~~~~~~~--~~--~~~s~ 281 (353)
T 3vgz_A 209 ITIDTADNKILSRKKLLDDGKEHFFINISLDTARQR-AFITDSKAAEVLVVDTRNGN--ILAKVAAPES--LA--VLFNP 281 (353)
T ss_dssp EEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTE-EEEEESSSSEEEEEETTTCC--EEEEEECSSC--CC--EEEET
T ss_pred EEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCE-EEEEeCCCCEEEEEECCCCc--EEEEEEcCCC--ce--EEECC
Confidence 5554 3555555544422223456888999998765 444433 589999996544 3444444443 33 34457
Q ss_pred CCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccceeeEEecCCc
Q 047869 1967 RGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSFQDGT 2032 (2233)
Q Consensus 1967 ~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY~~G~ 2032 (2233)
+|+...+.-..+|.|+.-+... + .....+.. .....++-++++-+.||++..+|.
T Consensus 282 dg~~l~v~~~~~~~v~~~d~~~-~-----~~~~~~~~-----~~~~~~~~~s~dg~~l~v~~~~~~ 336 (353)
T 3vgz_A 282 ARNEAYVTHRQAGKVSVIDAKS-Y-----KVVKTFDT-----PTHPNSLALSADGKTLYVSVKQKS 336 (353)
T ss_dssp TTTEEEEEETTTTEEEEEETTT-T-----EEEEEEEC-----CSEEEEEEECTTSCEEEEEEECCC
T ss_pred CCCEEEEEECCCCeEEEEECCC-C-----eEEEEEec-----CCCCCeEEEcCCCCEEEEEEcccc
Confidence 7875444444688888766541 1 11122222 223466788999999999887753
No 132
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=93.08 E-value=7.2 Score=47.78 Aligned_cols=122 Identities=16% Similarity=0.220 Sum_probs=77.2
Q ss_pred cceEEEEeecccCc-c-------ceEEeecccc--------------------eEEEEecCCCceeeeeeeeeccCCceE
Q 047869 1862 VRFEIVHLAFNSIV-E-------NYLTVAGYED--------------------CQVLTLNPRGEVTDRLAIELALQGAYI 1913 (2233)
Q Consensus 1862 VpFeVlsLafNP~n-E-------dyLAVcGLkD--------------------C~VLTfss~GeV~DRL~LeL~Leg~fI 1913 (2233)
++-.|.+|+++|.. + +||||..... ++|..++. |+..-.....+.....-|
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~-~~~~~~~~~~l~~~~~~V 210 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNT-STLHCVKVQTIVHSFGEV 210 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEET-TTCCEEEEEEEEECCCSE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccC-CCCCceEEEEEEecCCcE
Confidence 36678899999864 1 7999877542 23444432 221111111112223458
Q ss_pred EEeEEecC-----CCceEEEEecC-eEEEEeCcCCCC---------CCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecC
Q 047869 1914 RRVDWVPG-----SPVQLMVVTNK-FVKIYDLSQDNI---------SPLHYFTLPDDMIVDATLVIASRGKMFLIVLSEC 1978 (2233)
Q Consensus 1914 IKa~WLPG-----SQt~LAVVT~~-FVKIYDLS~D~l---------SPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~ 1978 (2233)
..+.|.|. ....||.+..+ .|||||+..... .|...+....+.|..++|- ..+ .|+.-|.+
T Consensus 211 ~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s--~~~--~lasgs~D 286 (524)
T 2j04_B 211 WDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFL--SPT--TVVCGFKN 286 (524)
T ss_dssp EEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEES--SSS--EEEEEETT
T ss_pred EEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEec--CCC--eEEEEeCC
Confidence 99999996 23468877777 899999976532 3566777777888888764 333 58888999
Q ss_pred CceEEEEecc
Q 047869 1979 GSLYRLELSV 1988 (2233)
Q Consensus 1979 G~LY~Qels~ 1988 (2233)
|.|..-++..
T Consensus 287 gtV~lWD~~~ 296 (524)
T 2j04_B 287 GFVAEFDLTD 296 (524)
T ss_dssp SEEEEEETTB
T ss_pred CEEEEEECCC
Confidence 9999888873
No 133
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=92.98 E-value=18 Score=46.98 Aligned_cols=194 Identities=16% Similarity=0.136 Sum_probs=114.7
Q ss_pred eeccc-CceEEEe-eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecccceEEEE
Q 047869 1814 LSVSS-RGRLAVG-EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYEDCQVLT 1891 (2233)
Q Consensus 1814 LSas~-rGrLAVa-EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLkDC~VLT 1891 (2233)
++.+. +..||++ ..+.|-|++....-. ..+ +. -.-.|.+|+|+| +++||.++ .|-.|.-
T Consensus 23 lafspdg~~lAsgs~Dg~I~lw~~~~~~~----------~~~---~~---~~~~V~~l~fsp--g~~L~S~s-~D~~v~l 83 (902)
T 2oaj_A 23 AAFDFTQNLLAIATVTGEVHIYGQQQVEV----------VIK---LE---DRSAIKEMRFVK--GIYLVVIN-AKDTVYV 83 (902)
T ss_dssp EEEETTTTEEEEEETTSEEEEECSTTCEE----------EEE---CS---SCCCEEEEEEET--TTEEEEEE-TTCEEEE
T ss_pred EEECCCCCEEEEEeCCCEEEEEeCCCcEE----------EEE---cC---CCCCEEEEEEcC--CCEEEEEE-CcCeEEE
Confidence 34444 4567876 667898987532110 011 11 123688999999 55777766 4555555
Q ss_pred ecC-CCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeCcCCCCCCcEEEEc------------CCCCe
Q 047869 1892 LNP-RGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQDNISPLHYFTL------------PDDMI 1957 (2233)
Q Consensus 1892 fss-~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D~lSPvyyF~L------------psGkI 1957 (2233)
++- .|+....+. ....|..+.|-|..+. ||+.+.+ .|+|||+....+. .|.+ -.+.|
T Consensus 84 Wd~~~~~~~~~~~-----~~~~V~~v~~sp~g~~-l~sgs~dg~V~lwd~~~~~~~---~~~i~~~~~~~~~~~~h~~~V 154 (902)
T 2oaj_A 84 LSLYSQKVLTTVF-----VPGKITSIDTDASLDW-MLIGLQNGSMIVYDIDRDQLS---SFKLDNLQKSSFFPAARLSPI 154 (902)
T ss_dssp EETTTCSEEEEEE-----CSSCEEEEECCTTCSE-EEEEETTSCEEEEETTTTEEE---EEEECCHHHHHTCSSSCCCCC
T ss_pred EECCCCcEEEEEc-----CCCCEEEEEECCCCCE-EEEEcCCCcEEEEECCCCccc---cceeccccccccccccCCCCe
Confidence 543 344433331 2346899999998866 5555544 9999999876542 2332 24678
Q ss_pred eEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeee--ccc--------ccccCCeEEEEeccccceeeEE
Q 047869 1958 VDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQ--FND--------REIHAKGLSLYFSSTYKLLFLS 2027 (2233)
Q Consensus 1958 rDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq--~~~--------~q~~~~GVSVyYS~tl~LLF~S 2027 (2233)
.+.+|- +++...+++-+.+|.+ .-++....... .+..... .+. ..-.+.-.++-||++-++|...
T Consensus 155 ~sl~~s--p~~~~~l~~g~~dg~v-lWd~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasg 229 (902)
T 2oaj_A 155 VSIQWN--PRDIGTVLISYEYVTL-TYSLVENEIKQ--SFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITI 229 (902)
T ss_dssp CEEEEE--TTEEEEEEEECSSCEE-EEETTTTEEEE--EECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEE
T ss_pred EEEEEc--cCCCCEEEEEeCCCcE-EEECCCCceEE--EEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEE
Confidence 877754 4444678888999999 77665211000 0000000 000 0011335688999998888888
Q ss_pred ecCCcEEEEEcCC
Q 047869 2028 FQDGTTLVGRLSP 2040 (2233)
Q Consensus 2028 Y~~G~Sf~a~Ls~ 2040 (2233)
..+|+..+=.+..
T Consensus 230 s~Dg~i~lWd~~~ 242 (902)
T 2oaj_A 230 HEDNSLVFWDANS 242 (902)
T ss_dssp ETTCCEEEEETTT
T ss_pred ECCCeEEEEECCC
Confidence 8999888876643
No 134
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=92.96 E-value=16 Score=41.88 Aligned_cols=264 Identities=13% Similarity=0.159 Sum_probs=135.4
Q ss_pred CceEEEe-eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecccceEEEEecC-CC
Q 047869 1819 RGRLAVG-EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYEDCQVLTLNP-RG 1896 (2233)
Q Consensus 1819 rGrLAVa-EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLkDC~VLTfss-~G 1896 (2233)
++.+|.+ ..+.|.++++..--.. .++. .-.-.|..+.++ +++||+++. |..|..++. .|
T Consensus 169 ~~~l~s~~~dg~i~vwd~~~~~~~----------~~~~-----~h~~~v~~~~~~---~~~l~s~s~-dg~i~~wd~~~~ 229 (445)
T 2ovr_B 169 DNIIISGSTDRTLKVWNAETGECI----------HTLY-----GHTSTVRCMHLH---EKRVVSGSR-DATLRVWDIETG 229 (445)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEE----------EEEC-----CCSSCEEEEEEE---TTEEEEEET-TSEEEEEESSSC
T ss_pred CCEEEEEeCCCeEEEEECCcCcEE----------EEEC-----CCCCcEEEEEec---CCEEEEEeC-CCEEEEEECCCC
Confidence 3455554 7788999987432100 0111 111245677774 567766654 444554543 23
Q ss_pred ceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEE
Q 047869 1897 EVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQDNISPLHYFTLPDDMIVDATLVIASRGKMFLIVL 1975 (2233)
Q Consensus 1897 eV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVL 1975 (2233)
+....+ .-....|..+.| .| ..+++.+.+ .|+|||+... .+...+.-..+.|....+ +| .++++.
T Consensus 230 ~~~~~~----~~~~~~v~~~~~-~~--~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~v~~~~~----~~-~~l~~~ 295 (445)
T 2ovr_B 230 QCLHVL----MGHVAAVRCVQY-DG--RRVVSGAYDFMVKVWDPETE--TCLHTLQGHTNRVYSLQF----DG-IHVVSG 295 (445)
T ss_dssp CEEEEE----ECCSSCEEEEEE-CS--SCEEEEETTSCEEEEEGGGT--EEEEEECCCSSCEEEEEE----CS-SEEEEE
T ss_pred cEEEEE----cCCcccEEEEEE-CC--CEEEEEcCCCEEEEEECCCC--cEeEEecCCCCceEEEEE----CC-CEEEEE
Confidence 332222 223556778888 22 346666655 8999998754 466667666778888776 45 367888
Q ss_pred ecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccceeeEEecCCcEEEEEcCCCcccccceeEEEEcc
Q 047869 1976 SECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSFQDGTTLVGRLSPNAASLSEVSYVFEEQ 2055 (2233)
Q Consensus 1976 SS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY~~G~Sf~a~Ls~~~~sv~eis~Vfe~~ 2055 (2233)
+.+|.|+.-++..... .. ..... ...-.++.+ .-++|+....+|+..+-.+.... .+ ..+..
T Consensus 296 ~~d~~i~i~d~~~~~~------~~--~~~~~--~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~----~~-~~~~~- 357 (445)
T 2ovr_B 296 SLDTSIRVWDVETGNC------IH--TLTGH--QSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQ----CL-QTLQG- 357 (445)
T ss_dssp ETTSCEEEEETTTCCE------EE--EECCC--CSCEEEEEE--ETTEEEEEETTSCEEEEETTTCC----EE-EEECS-
T ss_pred eCCCeEEEEECCCCCE------EE--EEcCC--cccEEEEEE--eCCEEEEEeCCCeEEEEECCCCc----EE-EEEcc-
Confidence 9999999988863210 00 11111 111222333 34567777778877776653321 11 11111
Q ss_pred CCCCCCCcc--cceeeccCCCceEEEEeccCCCceEEEEecCCceeeeccccc--cCCCCCeEEEEEeecCCCCCeEEEE
Q 047869 2056 DGKLRSAGL--HRWKELLASSGLFFCFSSLKSNAAVAVSLGTNELIAQNMRHA--AGSTSPLVGVTAYKPLSKDKVHCLV 2131 (2233)
Q Consensus 2056 ~gk~~~a~L--~qWsEV~~hPGLf~cls~~~sn~pvvv~l~pd~I~iQeiK~~--~~sSs~vdgva~y~p~s~~rttlLL 2131 (2233)
......+. ..| .|..+++.+. ++..-+.-+...+ .++.+... ......+-.++. +.+...+..
T Consensus 358 -~~~~~~~v~~~~~-----~~~~l~s~~~--dg~v~iwd~~~~~-~~~~~~~~~~~~~~~~v~~~~~----s~~~~~la~ 424 (445)
T 2ovr_B 358 -PNKHQSAVTCLQF-----NKNFVITSSD--DGTVKLWDLKTGE-FIRNLVTLESGGSGGVVWRIRA----SNTKLVCAV 424 (445)
T ss_dssp -TTSCSSCEEEEEE-----CSSEEEEEET--TSEEEEEETTTCC-EEEEEEECTTGGGTCEEEEEEE----CSSEEEEEE
T ss_pred -CCCCCCCEEEEEE-----CCCEEEEEeC--CCeEEEEECCCCc-eeeeeeccccCCCCceEEEEEe----cCCEEEEEE
Confidence 11111111 112 2444444222 4444444444333 23333211 112333444443 334555667
Q ss_pred EeeCCc----eeEEeccCC
Q 047869 2132 LHDDGS----LQIYSHVPH 2146 (2233)
Q Consensus 2132 LcEDGS----LrIYsa~P~ 2146 (2233)
=.+||+ +.||+..++
T Consensus 425 ~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 425 GSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp ECSSSSSCCEEEEEECCCC
T ss_pred cccCCCCccEEEEEECCCC
Confidence 788998 999987664
No 135
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=92.92 E-value=15 Score=41.47 Aligned_cols=184 Identities=10% Similarity=0.096 Sum_probs=98.3
Q ss_pred cCceEEEeeCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecccceEEEEec-CCC
Q 047869 1818 SRGRLAVGEGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYEDCQVLTLN-PRG 1896 (2233)
Q Consensus 1818 ~rGrLAVaEgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLkDC~VLTfs-s~G 1896 (2233)
.+..+|++-.+.+.|+++...-.... .... +..++.+.+ ..+++|++|-.+-.|.-++ .+|
T Consensus 30 dg~~la~g~~~~~~iw~~~~~~~~~~--------~~~~-------~~~~~~~~~---~~~~~~~~~~~d~~v~iWd~~~~ 91 (355)
T 3vu4_A 30 DQSCLILSTLKSFEIYNVHPVAHIMS--------QEMR-------HLSKVRMLH---RTNYVAFVTGVKEVVHIWDDVKK 91 (355)
T ss_dssp TSSEEEEECSSEEEEEEETTEEEEEE--------EECS-------CCCEEEECT---TSSEEEEECSSTTEEEEEETTTT
T ss_pred CCCEEEEEcCCEEEEEecCCcceeee--------eecC-------CeEEEEEcC---CCCEEEEEECCccEEEEEECCCC
Confidence 44568888777788888643211100 0000 233444444 4578888877765666665 345
Q ss_pred ceeeeeeeeeccCCceEEEeEEecCCCceEEEEecCeEEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEE--
Q 047869 1897 EVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNKFVKIYDLSQDNISPLHYFTLPDDMIVDATLVIASRGKMFLIV-- 1974 (2233)
Q Consensus 1897 eV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~FVKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILV-- 1974 (2233)
+....+. . ..-|..+.|-|. .+++++.+.|+|||+.... .+.+.+.-|. ..+.+ .. . ++.+
T Consensus 92 ~~~~~~~----~-~~~v~~v~~~~~---~~~~~~~~~i~i~d~~~~~-~~~~~~~~~~----~~~~~-s~--~-~la~~s 154 (355)
T 3vu4_A 92 QDVSRIK----V-DAPVKDLFLSRE---FIVVSYGDVISVFKFGNPW-KRITDDIRFG----GVCEF-SN--G-LLVYSN 154 (355)
T ss_dssp EEEEEEE----C-SSCEEEEEECSS---EEEEEETTEEEEEESSTTC-CBSSCCEEEE----EEEEE-ET--T-EEEEEE
T ss_pred cEEEEEE----C-CCceEEEEEcCC---EEEEEEcCEEEEEECCCCc-eeeEEeccCC----ceEEE-Ec--c-EEEEeC
Confidence 5444332 2 235777777554 5888899999999998751 1222222211 11112 12 2 3333
Q ss_pred EecCCceEEEEecccCCC-------cccccee-eeecccccccCCeEEEEeccccceeeEEecCCc-EEEEEc
Q 047869 1975 LSECGSLYRLELSVEGNV-------GATPLKE-IIQFNDREIHAKGLSLYFSSTYKLLFLSFQDGT-TLVGRL 2038 (2233)
Q Consensus 1975 LSS~G~LY~Qels~s~d~-------g~~~ltE-vvq~~~~q~~~~GVSVyYS~tl~LLF~SY~~G~-Sf~a~L 2038 (2233)
-+.+|.|+.-++...... ....+.. ...... -.+.-.++-||++-++|.-.-.+|+ ..+=.+
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~--h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~ 225 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKA--HTNPIKMVRLNRKSDMVATCSQDGTIIRVFKT 225 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECC--CSSCEEEEEECTTSSEEEEEETTCSEEEEEET
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEc--cCCceEEEEECCCCCEEEEEeCCCCEEEEEEC
Confidence 378899998887632200 0000101 111111 1233457888888888887778887 655544
No 136
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=92.89 E-value=12 Score=40.14 Aligned_cols=112 Identities=13% Similarity=0.084 Sum_probs=67.9
Q ss_pred EEEeecccCccceEEeecccceEEEEecC-CCceeeeeeeeecc-CCceEEEeEEecCCCceEEEEe-------------
Q 047869 1866 IVHLAFNSIVENYLTVAGYEDCQVLTLNP-RGEVTDRLAIELAL-QGAYIRRVDWVPGSPVQLMVVT------------- 1930 (2233)
Q Consensus 1866 VlsLafNP~nEdyLAVcGLkDC~VLTfss-~GeV~DRL~LeL~L-eg~fIIKa~WLPGSQt~LAVVT------------- 1930 (2233)
+.+++++| ++++|+|++..+-.|..++. .|++..++.+...- .+..+..+.|-|..+. |+++.
T Consensus 36 ~~~~~~s~-dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~-l~~~~~~~~~~~~~~~~~ 113 (337)
T 1pby_B 36 PMVPMVAP-GGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKT-LAIYESPVRLELTHFEVQ 113 (337)
T ss_dssp CCCEEECT-TSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSE-EEEEEEEEEECSSCEEEC
T ss_pred ccceEEcC-CCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCE-EEEEeccccccccccccc
Confidence 44688888 56788888777666666663 56666665543200 1224556788887654 55553
Q ss_pred cCeEEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEec
Q 047869 1931 NKFVKIYDLSQDNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELS 1987 (2233)
Q Consensus 1931 ~~FVKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels 1987 (2233)
...|.|||+... .+...+.. .+.+...+ +.++|+.. ++. +|.||.-++.
T Consensus 114 ~~~i~v~d~~~~--~~~~~~~~-~~~~~~~~--~s~dg~~l-~~~--~~~i~~~d~~ 162 (337)
T 1pby_B 114 PTRVALYDAETL--SRRKAFEA-PRQITMLA--WARDGSKL-YGL--GRDLHVMDPE 162 (337)
T ss_dssp CCEEEEEETTTT--EEEEEEEC-CSSCCCEE--ECTTSSCE-EEE--SSSEEEEETT
T ss_pred CceEEEEECCCC--cEEEEEeC-CCCcceeE--ECCCCCEE-EEe--CCeEEEEECC
Confidence 479999999643 23444444 23455555 35677643 333 5888877664
No 137
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=92.72 E-value=8.5 Score=50.00 Aligned_cols=164 Identities=13% Similarity=0.127 Sum_probs=100.3
Q ss_pred EEEeecccCccceEEeecccceEEEEecCC-Cceee--eeeeeec-----cCCceEEEeEEecCCCceEEEEecC-eEEE
Q 047869 1866 IVHLAFNSIVENYLTVAGYEDCQVLTLNPR-GEVTD--RLAIELA-----LQGAYIRRVDWVPGSPVQLMVVTNK-FVKI 1936 (2233)
Q Consensus 1866 VlsLafNP~nEdyLAVcGLkDC~VLTfss~-GeV~D--RL~LeL~-----Leg~fIIKa~WLPGSQt~LAVVT~~-FVKI 1936 (2233)
|.+++|.| ++++||.++ .|-.|--++-+ |.+.. .+.+++. -...-|..+.|=|..+. ||+.+.+ .|||
T Consensus 438 v~sv~~sp-dg~~laSgs-~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~-LAsgs~DgtV~l 514 (902)
T 2oaj_A 438 KRQKLPAE-YGTAFITGH-SNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLE-LAVSIETGDVVL 514 (902)
T ss_dssp CCCCCCCS-EEEEEEEEE-TTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTE-EEEEETTSCEEE
T ss_pred CCcccccc-cCcEEEEec-CCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCe-EEEEecCcEEEE
Confidence 34677888 566776655 55566555543 33211 1222221 12456999999999875 8888776 8999
Q ss_pred EeCcCCCC-------------------------------------------CCcEEEEcCCCCeeEEEEEEecCCcEEEE
Q 047869 1937 YDLSQDNI-------------------------------------------SPLHYFTLPDDMIVDATLVIASRGKMFLI 1973 (2233)
Q Consensus 1937 YDLS~D~l-------------------------------------------SPvyyF~LpsGkIrDaTfv~~e~G~~~IL 1973 (2233)
||+..... .|...+.-..+.|..++ +.++| ++.
T Consensus 515 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~sva--fSpdG--~lA 590 (902)
T 2oaj_A 515 FKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAIN--NSNIG--FVG 590 (902)
T ss_dssp EEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEE--ECBTS--EEE
T ss_pred EEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEE--ecCCc--EEE
Confidence 99976521 12444445677888877 35788 888
Q ss_pred EEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEec-----cc---cceeeEEecCCcEEEEEcCC
Q 047869 1974 VLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFS-----ST---YKLLFLSFQDGTTLVGRLSP 2040 (2233)
Q Consensus 1974 VLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS-----~t---l~LLF~SY~~G~Sf~a~Ls~ 2040 (2233)
+-|.+|.|..=++.. +....+..+..-...-.+.-.+|-|| ++ -+.|+..-.+|+..+=.+.+
T Consensus 591 sgs~D~tv~lwd~~~----~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p 661 (902)
T 2oaj_A 591 IAYAAGSLMLIDRRG----PAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILP 661 (902)
T ss_dssp EEETTSEEEEEETTT----TEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEE
T ss_pred EEeCCCcEEEEECCC----CeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEec
Confidence 999999988766541 11111111100000012335678888 65 58899999999988887733
No 138
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=92.60 E-value=15 Score=40.78 Aligned_cols=116 Identities=6% Similarity=0.078 Sum_probs=75.3
Q ss_pred EEEeec-----ccCccceEEeeccc-ceEEEEecCCCce--eeeeeeeeccCCceEEEeEEecCCCceEEEEec-CeEEE
Q 047869 1866 IVHLAF-----NSIVENYLTVAGYE-DCQVLTLNPRGEV--TDRLAIELALQGAYIRRVDWVPGSPVQLMVVTN-KFVKI 1936 (2233)
Q Consensus 1866 VlsLaf-----NP~nEdyLAVcGLk-DC~VLTfss~GeV--~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~-~FVKI 1936 (2233)
|.+++| +|.++++||.+|.. .+.|..+...... .....-.+.--...|..+.|-|..+. |+.... ..|+|
T Consensus 24 V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~-l~s~s~D~~v~l 102 (343)
T 2xzm_R 24 VTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCF-AISSSWDKTLRL 102 (343)
T ss_dssp EEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTE-EEEEETTSEEEE
T ss_pred hhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCE-EEEEcCCCcEEE
Confidence 667777 67678888888763 3556555432211 11111111222567999999997654 444443 48999
Q ss_pred EeCcCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEec
Q 047869 1937 YDLSQDNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELS 1987 (2233)
Q Consensus 1937 YDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels 1987 (2233)
||+... .+...|.--.+.|..++| .++|+ +++..+.+|.|+.-++.
T Consensus 103 wd~~~~--~~~~~~~~h~~~v~~v~~--sp~~~-~l~s~~~d~~i~~wd~~ 148 (343)
T 2xzm_R 103 WDLRTG--TTYKRFVGHQSEVYSVAF--SPDNR-QILSAGAEREIKLWNIL 148 (343)
T ss_dssp EETTSS--CEEEEEECCCSCEEEEEE--CSSTT-EEEEEETTSCEEEEESS
T ss_pred EECCCC--cEEEEEcCCCCcEEEEEE--CCCCC-EEEEEcCCCEEEEEecc
Confidence 999764 355667667788888775 35665 56778899999987775
No 139
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=92.50 E-value=1.4 Score=49.72 Aligned_cols=163 Identities=14% Similarity=0.199 Sum_probs=91.0
Q ss_pred ceEEEe---eCCeEEEEechhhhcccccCCcccccccccc-cc-ccccceEEEEeecccCccceEEeecccc--eEEEEe
Q 047869 1820 GRLAVG---EGDKVAIFDVGQLIGQATIQPVTADKTNVKP-LS-RNIVRFEIVHLAFNSIVENYLTVAGYED--CQVLTL 1892 (2233)
Q Consensus 1820 GrLAVa---EgdKVTILqlsaLLkQad~s~~skdKlTLtr-LS-sa~VpFeVlsLafNP~nEdyLAVcGLkD--C~VLTf 1892 (2233)
+.+|+. ..+.|.|+++..--.-.. .....+..++.| +. -..-.-.|..|+|+| ++++||.+|... +.|.-+
T Consensus 148 ~~la~~sg~~~g~v~iwd~~~~~~~~~-~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~-~g~~l~s~s~d~~~v~iwd~ 225 (355)
T 3vu4_A 148 GLLVYSNEFNLGQIHITKLQSSGSATT-QDQGVQQKAILGKGVLIKAHTNPIKMVRLNR-KSDMVATCSQDGTIIRVFKT 225 (355)
T ss_dssp TEEEEEESSCTTCEEEEECCC-------------------CCEEECCCSSCEEEEEECT-TSSEEEEEETTCSEEEEEET
T ss_pred cEEEEeCCCcCcEEEEEECCCCCcccc-ccccccccccCcccEEEEccCCceEEEEECC-CCCEEEEEeCCCCEEEEEEC
Confidence 667763 778899999864210000 000001111222 10 111234688999999 788999988765 445444
Q ss_pred cCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeCcCCCCCCcE------------------EEEcC
Q 047869 1893 NPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQDNISPLH------------------YFTLP 1953 (2233)
Q Consensus 1893 ss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D~lSPvy------------------yF~Lp 1953 (2233)
. +|+....+.- ......|..+.|-|..+. ||..+.+ .|+|||+......+.+ .|.++
T Consensus 226 ~-~~~~~~~~~~--g~h~~~v~~~~~s~~~~~-l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (355)
T 3vu4_A 226 E-DGVLVREFRR--GLDRADVVDMKWSTDGSK-LAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLS 301 (355)
T ss_dssp T-TCCEEEEEEC--TTCCSCEEEEEECTTSCE-EEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECC
T ss_pred C-CCcEEEEEEc--CCCCCcEEEEEECCCCCE-EEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEec
Confidence 3 3444332210 012457999999998765 5555554 8999999876544332 34455
Q ss_pred CCCe-eEEEEEEecCCcEEEEEEecCCceEEEEeccc
Q 047869 1954 DDMI-VDATLVIASRGKMFLIVLSECGSLYRLELSVE 1989 (2233)
Q Consensus 1954 sGkI-rDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s 1989 (2233)
.+.. ....+....+| ..+++-+.+|.++..++...
T Consensus 302 ~~~~~~~~~~a~~~d~-~~l~~~~~dg~~~~~~~~~~ 337 (355)
T 3vu4_A 302 VDKHVRGCKIAWISES-SLVVVWPHTRMIETFKVVFD 337 (355)
T ss_dssp CCTTCCCCEEEESSSS-EEEEEETTTTEEEEEEEEEE
T ss_pred cCCCCCceEEEEeCCC-CEEEEEeCCCeEEEEEEEcC
Confidence 4432 11233344666 47778888998887777643
No 140
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=92.44 E-value=17 Score=40.97 Aligned_cols=164 Identities=17% Similarity=0.176 Sum_probs=89.2
Q ss_pred EEEEeecccCccceEEeecc--cceEEEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEe--cCeEEEEeCc
Q 047869 1865 EIVHLAFNSIVENYLTVAGY--EDCQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVT--NKFVKIYDLS 1940 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGL--kDC~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT--~~FVKIYDLS 1940 (2233)
.+.+++|+| ++++|+|+.. ..+.++.+++.|++...-.+.....|...+.+.|-|..+. |+++. ...|+||++.
T Consensus 146 ~~~~~~~sp-dG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~-l~v~~~~~~~v~v~~~~ 223 (365)
T 1jof_A 146 GIHGMVFDP-TETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNY-LYALMEAGNRICEYVID 223 (365)
T ss_dssp CEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSE-EEEEETTTTEEEEEEEC
T ss_pred cceEEEECC-CCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCE-EEEEECCCCeEEEEEEe
Confidence 467899998 6778998854 5677877765676532222221112677899999998764 55554 3589999876
Q ss_pred CCCCCCc----EEEEcCCC------------CeeEEEEEEecCCcEEEEEEecCC------ceEEEEecccCCCccccce
Q 047869 1941 QDNISPL----HYFTLPDD------------MIVDATLVIASRGKMFLIVLSECG------SLYRLELSVEGNVGATPLK 1998 (2233)
Q Consensus 1941 ~D~lSPv----yyF~LpsG------------kIrDaTfv~~e~G~~~ILVLSS~G------~LY~Qels~s~d~g~~~lt 1998 (2233)
.+.=... ..-.+|.+ .+.+.+| +.++|+. +++.+..+ .|..-++... +. ++
T Consensus 224 ~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~-~spdG~~-l~v~~~~~~~~~~~~i~v~~~~~~---g~--~~ 296 (365)
T 1jof_A 224 PATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCA-LTFSGKY-MFASSRANKFELQGYIAGFKLRDC---GS--IE 296 (365)
T ss_dssp TTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEE-ECTTSSE-EEEEEEESSTTSCCEEEEEEECTT---SC--EE
T ss_pred CCCCcEEEccceEEcCCCCcCCcccccccccccccEEE-ECCCCCE-EEEECCCCCCCCCCeEEEEEECCC---CC--EE
Confidence 4322211 12345543 2444442 3677864 34444322 5666666522 21 12
Q ss_pred eeee-cccccccCCeEEEEecc---ccceeeEEecC-CcEEEEEcC
Q 047869 1999 EIIQ-FNDREIHAKGLSLYFSS---TYKLLFLSFQD-GTTLVGRLS 2039 (2233)
Q Consensus 1999 Evvq-~~~~q~~~~GVSVyYS~---tl~LLF~SY~~-G~Sf~a~Ls 2039 (2233)
.... .+.. ..++.++.+|+ +-+.|+++-.+ |+..+-.++
T Consensus 297 ~~~~~~~~~--~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~ 340 (365)
T 1jof_A 297 KQLFLSPTP--TSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWK 340 (365)
T ss_dssp EEEEEEECS--SCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEE
T ss_pred EeeeeeecC--CCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEc
Confidence 1111 1111 12233456677 56777776543 555444443
No 141
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=92.01 E-value=16 Score=39.80 Aligned_cols=121 Identities=12% Similarity=0.042 Sum_probs=80.4
Q ss_pred CceEEEeEEecCCCceEEEEecC-eEEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecc
Q 047869 1910 GAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQDNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSV 1988 (2233)
Q Consensus 1910 g~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~ 1988 (2233)
...|..+.|-|..+. ||....+ .|||||+......+...+.--.+.|.+++|-...+|+ +++.-|.+|.|..=++..
T Consensus 9 ~~~V~~~~~s~~g~~-las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~-~l~s~s~D~~v~iWd~~~ 86 (297)
T 2pm7_B 9 NEMIHDAVMDYYGKR-MATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGT-ILASCSYDGKVMIWKEEN 86 (297)
T ss_dssp SSCEEEEEECTTSSE-EEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCS-EEEEEETTTEEEEEEBSS
T ss_pred cCceEEEEECCCCCE-EEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCC-EEEEEcCCCEEEEEEcCC
Confidence 456888899887654 6666655 7999999876666777777778889988875444464 677788999999877752
Q ss_pred cCCCccccceeeeecccccccCCeEEEEeccc--cceeeEEecCCcEEEEEcCC
Q 047869 1989 EGNVGATPLKEIIQFNDREIHAKGLSLYFSST--YKLLFLSFQDGTTLVGRLSP 2040 (2233)
Q Consensus 1989 s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~t--l~LLF~SY~~G~Sf~a~Ls~ 2040 (2233)
.. ..... .... -...--++-+++. -++|.....+|+..+-.+..
T Consensus 87 ~~----~~~~~--~~~~--h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~ 132 (297)
T 2pm7_B 87 GR----WSQIA--VHAV--HSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKE 132 (297)
T ss_dssp SC----BCCCE--EECC--CSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCS
T ss_pred Cc----eEEEE--Eeec--CCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecC
Confidence 11 00000 0111 1223456788876 56777777888877766643
No 142
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=91.65 E-value=23 Score=40.69 Aligned_cols=148 Identities=11% Similarity=0.139 Sum_probs=86.5
Q ss_pred EEEEeecccCccceEEeecccceEEEEecC-CCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeCcCC
Q 047869 1865 EIVHLAFNSIVENYLTVAGYEDCQVLTLNP-RGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQD 1942 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGLkDC~VLTfss-~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D 1942 (2233)
.|..+.+ ++++||+++. |-.|..++. +|+.... +.-....|..+.| ....|++.+.+ .|+|||+...
T Consensus 135 ~v~~~~~---d~~~l~~g~~-dg~i~iwd~~~~~~~~~----~~~h~~~v~~l~~---~~~~l~sg~~dg~i~vwd~~~~ 203 (435)
T 1p22_A 135 GVYCLQY---DDQKIVSGLR-DNTIKIWDKNTLECKRI----LTGHTGSVLCLQY---DERVIITGSSDSTVRVWDVNTG 203 (435)
T ss_dssp CEEEEEC---CSSEEEEEES-SSCEEEEESSSCCEEEE----ECCCSSCEEEEEC---CSSEEEEEETTSCEEEEESSSC
T ss_pred cEEEEEE---CCCEEEEEeC-CCeEEEEeCCCCeEEEE----EcCCCCcEEEEEE---CCCEEEEEcCCCeEEEEECCCC
Confidence 3556666 6777777654 434444432 3333222 2223556888888 23367766666 8999999765
Q ss_pred CCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccc
Q 047869 1943 NISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYK 2022 (2233)
Q Consensus 1943 ~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~ 2022 (2233)
. +...+.-..+.|....+ . +. .++..+.+|.|+.-++...... ...... .+ -.+.-.++.+ .-+
T Consensus 204 ~--~~~~~~~h~~~v~~l~~---~-~~-~l~s~s~dg~i~vwd~~~~~~~---~~~~~~--~~--~~~~v~~~~~--~~~ 267 (435)
T 1p22_A 204 E--MLNTLIHHCEAVLHLRF---N-NG-MMVTCSKDRSIAVWDMASPTDI---TLRRVL--VG--HRAAVNVVDF--DDK 267 (435)
T ss_dssp C--EEEEECCCCSCEEEEEC---C-TT-EEEEEETTSCEEEEECSSSSCC---EEEEEE--CC--CSSCEEEEEE--ETT
T ss_pred c--EEEEEcCCCCcEEEEEE---c-CC-EEEEeeCCCcEEEEeCCCCCCc---eeeeEe--cC--CCCcEEEEEe--CCC
Confidence 3 56677667777877775 2 32 7888899999998887632211 000111 01 1122234444 456
Q ss_pred eeeEEecCCcEEEEEcC
Q 047869 2023 LLFLSFQDGTTLVGRLS 2039 (2233)
Q Consensus 2023 LLF~SY~~G~Sf~a~Ls 2039 (2233)
.|+....+|+..+-.+.
T Consensus 268 ~l~s~~~dg~i~vwd~~ 284 (435)
T 1p22_A 268 YIVSASGDRTIKVWNTS 284 (435)
T ss_dssp EEEEEETTSEEEEEETT
T ss_pred EEEEEeCCCeEEEEECC
Confidence 67777777777666553
No 143
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=91.48 E-value=4.9 Score=41.65 Aligned_cols=156 Identities=11% Similarity=0.086 Sum_probs=85.6
Q ss_pred EEEEeecccCccceEEeecccceEEEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEec---CeEEEEeCcC
Q 047869 1865 EIVHLAFNSIVENYLTVAGYEDCQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTN---KFVKIYDLSQ 1941 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGLkDC~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~---~FVKIYDLS~ 1941 (2233)
.|.+++++| ++++||+++-..+.++.+...|+.. + +........|..+.|-|..+. |+.+.. ..++||++..
T Consensus 43 ~v~~~~~sp-dg~~l~~~~~~~i~~~d~~~~~~~~-~--~~~~~~~~~~~~~~~spdg~~-l~~~~~~~~~~~~l~~~~~ 117 (297)
T 2ojh_A 43 LFEAPNWSP-DGKYLLLNSEGLLYRLSLAGDPSPE-K--VDTGFATICNNDHGISPDGAL-YAISDKVEFGKSAIYLLPS 117 (297)
T ss_dssp CCEEEEECT-TSSEEEEEETTEEEEEESSSCCSCE-E--CCCTTCCCBCSCCEECTTSSE-EEEEECTTTSSCEEEEEET
T ss_pred ceEeeEECC-CCCEEEEEcCCeEEEEeCCCCCCce-E--eccccccccccceEECCCCCE-EEEEEeCCCCcceEEEEEC
Confidence 466889998 7789999886666666554323322 1 111112456778899998765 555553 2678887765
Q ss_pred CCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEecccc
Q 047869 1942 DNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTY 2021 (2233)
Q Consensus 1942 D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl 2021 (2233)
+.-.+. .+. ..+.+... .+.++|+.+++..+.+|.+..-.+...+.. . ..+.. ....-.++.+|++-
T Consensus 118 ~~~~~~-~~~-~~~~~~~~--~~spdg~~l~~~~~~~~~~~l~~~~~~~~~-~------~~~~~--~~~~~~~~~~s~dg 184 (297)
T 2ojh_A 118 TGGTPR-LMT-KNLPSYWH--GWSPDGKSFTYCGIRDQVFDIYSMDIDSGV-E------TRLTH--GEGRNDGPDYSPDG 184 (297)
T ss_dssp TCCCCE-ECC-SSSSEEEE--EECTTSSEEEEEEEETTEEEEEEEETTTCC-E------EECCC--SSSCEEEEEECTTS
T ss_pred CCCceE-Eee-cCCCccce--EECCCCCEEEEEECCCCceEEEEEECCCCc-c------eEccc--CCCccccceECCCC
Confidence 543322 222 22234333 345788877777778885544444322211 0 11111 12234567788877
Q ss_pred ceeeEEe-cCCcEEEEEc
Q 047869 2022 KLLFLSF-QDGTTLVGRL 2038 (2233)
Q Consensus 2022 ~LLF~SY-~~G~Sf~a~L 2038 (2233)
+.|+++- .+|+.-+-.+
T Consensus 185 ~~l~~~~~~~~~~~i~~~ 202 (297)
T 2ojh_A 185 RWIYFNSSRTGQMQIWRV 202 (297)
T ss_dssp SEEEEEECTTSSCEEEEE
T ss_pred CEEEEEecCCCCccEEEE
Confidence 7665554 3555444444
No 144
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=90.71 E-value=23 Score=39.11 Aligned_cols=116 Identities=16% Similarity=0.247 Sum_probs=78.8
Q ss_pred CceEEEeEEecCCCceEEEEecC-eEEEEeCcCCCC---CCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEE
Q 047869 1910 GAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQDNI---SPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLE 1985 (2233)
Q Consensus 1910 g~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D~l---SPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qe 1985 (2233)
..-|..+.|-|+....|+....+ .|+|||+..+.. .|...|.--.+.|.+++|- .+|. +++.-|.+|.|..-+
T Consensus 17 ~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s--~dg~-~l~s~s~D~~v~~wd 93 (319)
T 3frx_A 17 NGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLT--ADGA-YALSASWDKTLRLWD 93 (319)
T ss_dssp SSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEEC--TTSS-EEEEEETTSEEEEEE
T ss_pred cceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEEC--CCCC-EEEEEeCCCEEEEEE
Confidence 45688999999876667766665 899999986543 2566676667788888753 5664 677888999999887
Q ss_pred ecccCCCccccceeeeecccccccCCeEEEEeccccceeeEEecCCcEEEEEc
Q 047869 1986 LSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSFQDGTTLVGRL 2038 (2233)
Q Consensus 1986 ls~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY~~G~Sf~a~L 2038 (2233)
+.... . + ....+ -.+.-.++.+++.-++|...-.+|+..+=.+
T Consensus 94 ~~~~~----~-~---~~~~~--h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~ 136 (319)
T 3frx_A 94 VATGE----T-Y---QRFVG--HKSDVMSVDIDKKASMIISGSRDKTIKVWTI 136 (319)
T ss_dssp TTTTE----E-E---EEEEC--CSSCEEEEEECTTSCEEEEEETTSCEEEEET
T ss_pred CCCCC----e-e---EEEcc--CCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 75221 0 0 01111 1233456788888888887778887766555
No 145
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=90.49 E-value=31 Score=42.04 Aligned_cols=97 Identities=11% Similarity=0.049 Sum_probs=52.9
Q ss_pred cccCceEEEeeCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecccceEEEEecCC
Q 047869 1816 VSSRGRLAVGEGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYEDCQVLTLNPR 1895 (2233)
Q Consensus 1816 as~rGrLAVaEgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLkDC~VLTfss~ 1895 (2233)
.+..+++++.-.+.|-++++..- + .. .++.- +-.+.+++|+| ++++||++.-.++.|..+...
T Consensus 89 ~spd~~~~~~~~~~i~~~d~~~~--~-------~~--~l~~~-----~~~~~~~~~Sp-dG~~la~~~~~~i~v~~~~~~ 151 (706)
T 2z3z_A 89 DAGRGLVVLFTQGGLVGFDMLAR--K-------VT--YLFDT-----NEETASLDFSP-VGDRVAYVRNHNLYIARGGKL 151 (706)
T ss_dssp ETTTTEEEEEETTEEEEEETTTT--E-------EE--EEECC-----TTCCTTCEECT-TSSEEEEEETTEEEEEECBCT
T ss_pred ECCCCeEEEEECCEEEEEECCCC--c-------eE--EccCC-----cccccCCcCCC-CCCEEEEEECCeEEEEecCcc
Confidence 34448888887799999987321 0 01 11111 11245688888 778888876666777766542
Q ss_pred ----Cceeeeeeeeec----------cCCceEEEeEEecCCCceEEEEe
Q 047869 1896 ----GEVTDRLAIELA----------LQGAYIRRVDWVPGSPVQLMVVT 1930 (2233)
Q Consensus 1896 ----GeV~DRL~LeL~----------Leg~fIIKa~WLPGSQt~LAVVT 1930 (2233)
|+...-....-. .+...+..+.|-|..+. ||.+.
T Consensus 152 ~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~-la~~~ 199 (706)
T 2z3z_A 152 GEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSC-LAFYR 199 (706)
T ss_dssp TSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSE-EEEEE
T ss_pred cccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCE-EEEEE
Confidence 332211000000 00112577889999876 55543
No 146
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=89.55 E-value=45 Score=40.69 Aligned_cols=147 Identities=16% Similarity=0.156 Sum_probs=78.1
Q ss_pred EEEeecccCccceEEeecc--------------------------------cceEEEEecCCCceeeeeeeeeccCCceE
Q 047869 1866 IVHLAFNSIVENYLTVAGY--------------------------------EDCQVLTLNPRGEVTDRLAIELALQGAYI 1913 (2233)
Q Consensus 1866 VlsLafNP~nEdyLAVcGL--------------------------------kDC~VLTfss~GeV~DRL~LeL~Leg~fI 1913 (2233)
+.++.++| ++++||++++ .+..|..++..+.-..++.. ..-.+.++
T Consensus 183 ~~~~~~Sp-Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~-~~~~~~~~ 260 (706)
T 2z3z_A 183 EKGTFWSP-KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQT-GEPKEKFL 260 (706)
T ss_dssp CCSEEECT-TSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCC-CSCTTCEE
T ss_pred CceEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeecc-CCCCceeE
Confidence 35788988 7889999874 34566666554432222111 11135789
Q ss_pred EEeEEecCCCceEEEEe-cC-----eEEEEeCcCC-CCCCcEEEEcCCCC----eeEEEEEEec--CCcEEEEEEecCCc
Q 047869 1914 RRVDWVPGSPVQLMVVT-NK-----FVKIYDLSQD-NISPLHYFTLPDDM----IVDATLVIAS--RGKMFLIVLSECGS 1980 (2233)
Q Consensus 1914 IKa~WLPGSQt~LAVVT-~~-----FVKIYDLS~D-~lSPvyyF~LpsGk----IrDaTfv~~e--~G~~~ILVLSS~G~ 1980 (2233)
..+.|-|..+. |++++ +. .|.+||+..- ..... +.-..+. +.+.+ +.+ +|+ ++++.+.+|.
T Consensus 261 ~~~~~spdg~~-l~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~~~~~~~~~~~~~--~sp~~dg~-~l~~~~~~g~ 334 (706)
T 2z3z_A 261 TNLSWSPDENI-LYVAEVNRAQNECKVNAYDAETGRFVRTL--FVETDKHYVEPLHPLT--FLPGSNNQ-FIWQSRRDGW 334 (706)
T ss_dssp EEEEECTTSSE-EEEEEECTTSCEEEEEEEETTTCCEEEEE--EEEECSSCCCCCSCCE--ECTTCSSE-EEEEECTTSS
T ss_pred eeEEEECCCCE-EEEEEeCCCCCeeEEEEEECCCCceeeEE--EEccCCCeECccCCce--eecCCCCE-EEEEEccCCc
Confidence 99999999875 55544 33 7999998754 22111 1111111 22333 345 775 5566666675
Q ss_pred eEEEEecccCCCccccceeeeecccccccCCeE-E-EEeccccceeeEEecC
Q 047869 1981 LYRLELSVEGNVGATPLKEIIQFNDREIHAKGL-S-LYFSSTYKLLFLSFQD 2030 (2233)
Q Consensus 1981 LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GV-S-VyYS~tl~LLF~SY~~ 2030 (2233)
+....+...+. ...++..+ ...+ + +.+|++-+.|+++-..
T Consensus 335 ~~l~~~~~~~~-------~~~~l~~~---~~~v~~~~~~spdg~~l~~~~~~ 376 (706)
T 2z3z_A 335 NHLYLYDTTGR-------LIRQVTKG---EWEVTNFAGFDPKGTRLYFESTE 376 (706)
T ss_dssp CEEEEEETTSC-------EEEECCCS---SSCEEEEEEECTTSSEEEEEESS
T ss_pred cEEEEEECCCC-------EEEecCCC---CeEEEeeeEEcCCCCEEEEEecC
Confidence 54444442221 01111111 1223 3 6788888777665543
No 147
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=89.51 E-value=17 Score=41.53 Aligned_cols=115 Identities=16% Similarity=0.267 Sum_probs=68.7
Q ss_pred EEEEeeccc-------CccceEEeecccceEEEEec--CCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eE
Q 047869 1865 EIVHLAFNS-------IVENYLTVAGYEDCQVLTLN--PRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FV 1934 (2233)
Q Consensus 1865 eVlsLafNP-------~nEdyLAVcGLkDC~VLTfs--s~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FV 1934 (2233)
.|.+|+|+| .++++||-+|- |+.|.-++ ..+.+ ..+.--...+..+.|-|.....||....+ .|
T Consensus 138 ~v~~v~~~p~~~~~~~~d~~~las~s~-D~tv~~Wd~~~~~~~-----~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v 211 (393)
T 4gq1_A 138 FVNDIDIADVYSADNRLAEQVIASVGD-DCTLIIWRLTDEGPI-----LAGYPLSSPGISVQFRPSNPNQLIVGERNGNI 211 (393)
T ss_dssp CEEEEEEEEEECTTCSEEEEEEEEEET-TSEEEEEEEETTEEE-----EEEEECSSCEEEEEEETTEEEEEEEEETTSEE
T ss_pred ceEEEEEccccccccCCCCCEEEEEEC-CCeEEEEECCCCcee-----eeecCCCCCcEEEEECCCCCceEEecCCCCEE
Confidence 477888876 46788888885 56665554 33222 12222245688999999887778877666 79
Q ss_pred EEEeCcCCCCCCcEEE-----------------------EcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEec
Q 047869 1935 KIYDLSQDNISPLHYF-----------------------TLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELS 1987 (2233)
Q Consensus 1935 KIYDLS~D~lSPvyyF-----------------------~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels 1987 (2233)
+|||+..........- .-..+.+..+.+. ..+|+ .++..+.+|.+..-++.
T Consensus 212 ~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~-~~dg~-~l~s~s~d~~i~vwd~~ 285 (393)
T 4gq1_A 212 RIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWI-GSDGS-GILAMCKSGAWLRWNLF 285 (393)
T ss_dssp EEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEE-TTTTC-EEEEECTTSEEEEEEC-
T ss_pred EEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeee-cCCCC-EEEEEeCCCCEEEEECc
Confidence 9999986543321110 0112233444432 35664 66778888888877665
No 148
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=89.42 E-value=25 Score=42.29 Aligned_cols=195 Identities=14% Similarity=0.144 Sum_probs=99.2
Q ss_pred eecccCceEEEe-e-----CCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecc---
Q 047869 1814 LSVSSRGRLAVG-E-----GDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGY--- 1884 (2233)
Q Consensus 1814 LSas~rGrLAVa-E-----gdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGL--- 1884 (2233)
+-...+++++|. + .+.|+++|... .+.+.+-++++.- +|+++| ++++|.|+.-
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t----------------~~v~~~I~vG~~P-~va~sp-DG~~lyVan~~~~ 100 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEA----------------GRVIGMIDGGFLP-NPVVAD-DGSFIAHASTVFS 100 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTT----------------TEEEEEEEECSSC-EEEECT-TSSCEEEEEEEEE
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCC----------------CeEEEEEECCCCC-cEEECC-CCCEEEEEccccc
Confidence 334557788886 4 46899998622 1223333444443 489988 7888888752
Q ss_pred ------cceEEEEec-CCCceeeeeeeee---ccCCceEEEeEEecCCCceEEEEe---cCeEEEEeCcCCCCCCcEEEE
Q 047869 1885 ------EDCQVLTLN-PRGEVTDRLAIEL---ALQGAYIRRVDWVPGSPVQLMVVT---NKFVKIYDLSQDNISPLHYFT 1951 (2233)
Q Consensus 1885 ------kDC~VLTfs-s~GeV~DRL~LeL---~Leg~fIIKa~WLPGSQt~LAVVT---~~FVKIYDLS~D~lSPvyyF~ 1951 (2233)
++=.|-.|+ ..++++.++.+-. ..-|.+-..+..-|..+. +.|+. ...|.|.|+....+ +..+-
T Consensus 101 r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~-lyVan~~~~~~VsVID~~t~~v--v~tI~ 177 (386)
T 3sjl_D 101 RIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKT-LLFYQFSPAPAVGVVDLEGKAF--KRMLD 177 (386)
T ss_dssp ETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSE-EEEEECSSSCEEEEEETTTTEE--EEEEE
T ss_pred ccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCE-EEEEEcCCCCeEEEEECCCCcE--EEEEE
Confidence 232344443 4467777766522 011222223334455443 33332 35799999887653 33333
Q ss_pred cCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEe-ccccceeeEEecC
Q 047869 1952 LPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYF-SSTYKLLFLSFQD 2030 (2233)
Q Consensus 1952 LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyY-S~tl~LLF~SY~~ 2030 (2233)
+|. . ..++ +.|....+..+.+|.+.+=.+...+... ...+..+..........+ .| ..+-+++|+|| +
T Consensus 178 v~g-~----~~~~-P~g~~~~~~~~~DG~~~~v~~~~~g~v~-~~~~~~~~~~~~~~~~~~---~~~~~dG~~~~vs~-~ 246 (386)
T 3sjl_D 178 VPD-C----YHIF-PTAPDTFFMHCRDGSLAKVAFGTEGTPE-ITHTEVFHPEDEFLINHP---AYSQKAGRLVWPTY-T 246 (386)
T ss_dssp CCS-E----EEEE-EEETTEEEEEETTSCEEEEECCSSSCCE-EEECCCCSCTTSCBCSCC---EEETTTTEEEEEBT-T
T ss_pred CCC-c----ceee-cCCCceeEEECCCCCEEEEECCCCCeEE-Eeecceeccccccccccc---eeEcCCCcEEEEeC-C
Confidence 332 1 1222 3343444466777777766655333221 001111111111111111 23 35567889999 6
Q ss_pred CcEEEEEcCC
Q 047869 2031 GTTLVGRLSP 2040 (2233)
Q Consensus 2031 G~Sf~a~Ls~ 2040 (2233)
|+.+...+..
T Consensus 247 g~V~v~d~~~ 256 (386)
T 3sjl_D 247 GKIHQIDLSS 256 (386)
T ss_dssp SEEEEEECTT
T ss_pred CEEEEEECCC
Confidence 8888887643
No 149
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=88.07 E-value=16 Score=44.70 Aligned_cols=155 Identities=11% Similarity=0.111 Sum_probs=78.9
Q ss_pred EEEeecccCccceEEeecccc--------------------------------eEEEEecCCC-ceeeeeeeeeccCCce
Q 047869 1866 IVHLAFNSIVENYLTVAGYED--------------------------------CQVLTLNPRG-EVTDRLAIELALQGAY 1912 (2233)
Q Consensus 1866 VlsLafNP~nEdyLAVcGLkD--------------------------------C~VLTfss~G-eV~DRL~LeL~Leg~f 1912 (2233)
+.+++|+| ++++||++...+ ..|..++..+ .-..++... .-.+.+
T Consensus 211 ~~~~~~Sp-Dg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~-~~~~~~ 288 (741)
T 2ecf_A 211 HTGYWWAP-DDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLG-KEQDIY 288 (741)
T ss_dssp CCSEEECT-TSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCC-SCSSEE
T ss_pred ccceEECC-CCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCC-CCcceE
Confidence 35788988 788898886532 2455554433 211111111 013578
Q ss_pred EEEeEEecCCCceEEEEe-----cCeEEEEeCcCCCCCCcEEEEcCCC----CeeEEEEEEecCCcEEEEEEecCCceEE
Q 047869 1913 IRRVDWVPGSPVQLMVVT-----NKFVKIYDLSQDNISPLHYFTLPDD----MIVDATLVIASRGKMFLIVLSECGSLYR 1983 (2233)
Q Consensus 1913 IIKa~WLPGSQt~LAVVT-----~~FVKIYDLS~D~lSPvyyF~LpsG----kIrDaTfv~~e~G~~~ILVLSS~G~LY~ 1983 (2233)
+..+.| |..+..+.... ...|.+||+..-.... .+.-..+ .+.+.+ +.++|+ +++..+.+|..-.
T Consensus 289 ~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~--~~~~~~~~~~~~~~~~~--~spdg~-~~~~~~~~g~~~l 362 (741)
T 2ecf_A 289 LARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRV--LAHETSPTWVPLHNSLR--FLDDGS-ILWSSERTGFQHL 362 (741)
T ss_dssp EEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEE--EEEEECSSCCCCCSCCE--ECTTSC-EEEEECTTSSCEE
T ss_pred EEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEE--EEEcCCCCcCCcCCceE--ECCCCe-EEEEecCCCccEE
Confidence 999999 99876433333 2468888987654322 2222221 123333 357787 6666667774333
Q ss_pred EEecccCCCccccceeeeecccccccCCeEEE-EeccccceeeEEe-cCC--cEEEEEc
Q 047869 1984 LELSVEGNVGATPLKEIIQFNDREIHAKGLSL-YFSSTYKLLFLSF-QDG--TTLVGRL 2038 (2233)
Q Consensus 1984 Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSV-yYS~tl~LLF~SY-~~G--~Sf~a~L 2038 (2233)
..+...+. ...++. . ...-.++ .+|++-+.|+++. .+| +..+-.+
T Consensus 363 ~~~~~~~~--~~~l~~------~--~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~ 411 (741)
T 2ecf_A 363 YRIDSKGK--AAALTH------G--NWSVDELLAVDEKAGLAYFRAGIESARESQIYAV 411 (741)
T ss_dssp EEECSSSC--EEESCC------S--SSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEE
T ss_pred EEEcCCCC--eeeeee------c--ceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEE
Confidence 33332221 122211 1 1112245 4888887665544 444 4444443
No 150
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=87.94 E-value=17 Score=38.79 Aligned_cols=110 Identities=9% Similarity=0.054 Sum_probs=59.1
Q ss_pred eecccCc-eEEEe--eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeec-------
Q 047869 1814 LSVSSRG-RLAVG--EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAG------- 1883 (2233)
Q Consensus 1814 LSas~rG-rLAVa--EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcG------- 1883 (2233)
++.+..| ++++. ..+.|.++++...- ...++.+.. ....+-.+.+++++| ++++|+|++
T Consensus 39 ~~~s~dg~~l~v~~~~~~~v~~~d~~~~~--------~~~~~~~~~--~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~ 107 (337)
T 1pby_B 39 PMVAPGGRIAYATVNKSESLVKIDLVTGE--------TLGRIDLST--PEERVKSLFGAALSP-DGKTLAIYESPVRLEL 107 (337)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTTCC--------EEEEEECCB--TTEEEECTTCEEECT-TSSEEEEEEEEEEECS
T ss_pred eEEcCCCCEEEEEeCCCCeEEEEECCCCC--------eEeeEEcCC--cccccccccceEECC-CCCEEEEEeccccccc
Confidence 4555555 56664 45689999874210 011111111 000111234678887 677888884
Q ss_pred ------ccceEEEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecCeEEEEeCcCC
Q 047869 1884 ------YEDCQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNKFVKIYDLSQD 1942 (2233)
Q Consensus 1884 ------LkDC~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~FVKIYDLS~D 1942 (2233)
-..+.++.+ ..|++...+.. +..+..+.|-|..+. |+++ +..|.+||+...
T Consensus 108 ~~~~~~~~~i~v~d~-~~~~~~~~~~~-----~~~~~~~~~s~dg~~-l~~~-~~~i~~~d~~~~ 164 (337)
T 1pby_B 108 THFEVQPTRVALYDA-ETLSRRKAFEA-----PRQITMLAWARDGSK-LYGL-GRDLHVMDPEAG 164 (337)
T ss_dssp SCEEECCCEEEEEET-TTTEEEEEEEC-----CSSCCCEEECTTSSC-EEEE-SSSEEEEETTTT
T ss_pred ccccccCceEEEEEC-CCCcEEEEEeC-----CCCcceeEECCCCCE-EEEe-CCeEEEEECCCC
Confidence 244444444 33444433322 344566778888755 4444 788999998643
No 151
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=86.89 E-value=61 Score=39.23 Aligned_cols=169 Identities=13% Similarity=0.126 Sum_probs=91.2
Q ss_pred cceEEEEeecccCccceEEeecccc---------eEEEEecCCC------ceeeeeeeeeccCCceEEEeEEecCCCceE
Q 047869 1862 VRFEIVHLAFNSIVENYLTVAGYED---------CQVLTLNPRG------EVTDRLAIELALQGAYIRRVDWVPGSPVQL 1926 (2233)
Q Consensus 1862 VpFeVlsLafNP~nEdyLAVcGLkD---------C~VLTfss~G------eV~DRL~LeL~Leg~fIIKa~WLPGSQt~L 1926 (2233)
-...+.+++|+| ++++||.+.... ..|..++..| .-..++. + -...++..+.|=|..+. |
T Consensus 128 ~~~~~~~~~~sp-Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~-~--~~~~~~~~~~~SpDG~~-l 202 (662)
T 3azo_A 128 GGLRWADPVLLP-ERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELS-D--DAHRFVTGPRLSPDGRQ-A 202 (662)
T ss_dssp TCEEEEEEEEET-TTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESS-C--SCSSEECCCEECTTSSE-E
T ss_pred CCccccCcEECC-CCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEE-e--cCCCcccCceECCCCCE-E
Confidence 345678999999 778888877542 6777777665 3222221 0 22457778889998765 6
Q ss_pred EEEecC---------eEEEEeCcC-CCCCCcEEEEc-CCCCeeEEEEEEecCCcEEEEEEecCC--ceEEEEecccCCCc
Q 047869 1927 MVVTNK---------FVKIYDLSQ-DNISPLHYFTL-PDDMIVDATLVIASRGKMFLIVLSECG--SLYRLELSVEGNVG 1993 (2233)
Q Consensus 1927 AVVT~~---------FVKIYDLS~-D~lSPvyyF~L-psGkIrDaTfv~~e~G~~~ILVLSS~G--~LY~Qels~s~d~g 1993 (2233)
|.+..+ -|.+||+.. ..........- ..+.+...+ +.++|+ ++++.+.+| .||.-++. .+.
T Consensus 203 a~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~--~spdg~-l~~~~~~~~~~~l~~~~~~-~~~-- 276 (662)
T 3azo_A 203 VWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAE--WAPDGS-LIVATDRTGWWNLHRVDPA-TGA-- 276 (662)
T ss_dssp EEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEE--ECTTSC-EEEEECTTSSCEEEEECTT-TCC--
T ss_pred EEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceE--ECCCCe-EEEEECCCCCeEEEEEECC-CCc--
Confidence 655533 588899873 21111111111 134444443 357887 555555566 67765542 111
Q ss_pred cccceee-eecccccccCCeEEEEeccccceeeEEecCCcEEEEEcCCCc
Q 047869 1994 ATPLKEI-IQFNDREIHAKGLSLYFSSTYKLLFLSFQDGTTLVGRLSPNA 2042 (2233)
Q Consensus 1994 ~~~ltEv-vq~~~~q~~~~GVSVyYS~tl~LLF~SY~~G~Sf~a~Ls~~~ 2042 (2233)
...++.. -......-.-++.++.+++.-+++|.+.. |+.-+..++...
T Consensus 277 ~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~ 325 (662)
T 3azo_A 277 ATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPES 325 (662)
T ss_dssp EEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTT
T ss_pred eeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCC
Confidence 1111110 00000001111334667777777777777 877776665443
No 152
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=86.71 E-value=39 Score=36.60 Aligned_cols=160 Identities=14% Similarity=0.104 Sum_probs=93.9
Q ss_pred EEEeecccCccceEEeecccceEEEEecC-CCceeeeeeeeeccC-----CceEEEeEEecCCCceEEEEe---cCeEEE
Q 047869 1866 IVHLAFNSIVENYLTVAGYEDCQVLTLNP-RGEVTDRLAIELALQ-----GAYIRRVDWVPGSPVQLMVVT---NKFVKI 1936 (2233)
Q Consensus 1866 VlsLafNP~nEdyLAVcGLkDC~VLTfss-~GeV~DRL~LeL~Le-----g~fIIKa~WLPGSQt~LAVVT---~~FVKI 1936 (2233)
+.+++++| ++++|+|++..+-.|..++. .|++..++.++-... ...+..+.|-|..+. ++++. ...|.+
T Consensus 91 ~~~~~~s~-dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~-l~~~~~~~~~~i~~ 168 (353)
T 3vgz_A 91 PFGATINN-TTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNT-VYISGIGKESVIWV 168 (353)
T ss_dssp CCSEEEET-TTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTE-EEEEEESSSCEEEE
T ss_pred cceEEECC-CCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCE-EEEEecCCCceEEE
Confidence 45678877 66788888887777877765 577766665532211 124788899998764 55555 356999
Q ss_pred EeCcCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEE
Q 047869 1937 YDLSQDNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLY 2016 (2233)
Q Consensus 1937 YDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVy 2016 (2233)
||+.... ....+......+...++ .++|+ ++++.+.+|.|+.-++.. + .....+..........-.++.
T Consensus 169 ~d~~~~~--~~~~~~~~~~~~~~~~~--s~dg~-~l~~~~~~~~i~~~d~~~-~-----~~~~~~~~~~~~~~~~~~~~~ 237 (353)
T 3vgz_A 169 VDGGNIK--LKTAIQNTGKMSTGLAL--DSEGK-RLYTTNADGELITIDTAD-N-----KILSRKKLLDDGKEHFFINIS 237 (353)
T ss_dssp EETTTTE--EEEEECCCCTTCCCCEE--ETTTT-EEEEECTTSEEEEEETTT-T-----EEEEEEECCCSSSCCCEEEEE
T ss_pred EcCCCCc--eEEEecCCCCccceEEE--CCCCC-EEEEEcCCCeEEEEECCC-C-----eEEEEEEcCCCCCCcccceEE
Confidence 9986433 22233222223555443 46675 566777889998655431 1 111122221111122344578
Q ss_pred eccccceeeEEecC-CcEEEEEc
Q 047869 2017 FSSTYKLLFLSFQD-GTTLVGRL 2038 (2233)
Q Consensus 2017 YS~tl~LLF~SY~~-G~Sf~a~L 2038 (2233)
++++-+.||++-.. |+.++-.+
T Consensus 238 ~s~dg~~l~~~~~~~~~v~~~d~ 260 (353)
T 3vgz_A 238 LDTARQRAFITDSKAAEVLVVDT 260 (353)
T ss_dssp EETTTTEEEEEESSSSEEEEEET
T ss_pred ECCCCCEEEEEeCCCCEEEEEEC
Confidence 89998888888654 55444443
No 153
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=86.70 E-value=46 Score=41.47 Aligned_cols=179 Identities=11% Similarity=0.109 Sum_probs=105.8
Q ss_pred ecccCceEEEe--eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecccceEEEEe
Q 047869 1815 SVSSRGRLAVG--EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYEDCQVLTL 1892 (2233)
Q Consensus 1815 Sas~rGrLAVa--EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLkDC~VLTf 1892 (2233)
..+.+++++|. ..+.|+|+|... -+.+.+-++++.+.+++|+| +++||.|++ ++-.|..|
T Consensus 162 ~~d~~~~~~V~~~~~~~V~viD~~t----------------~~v~~~i~~g~~p~~v~~Sp-DGr~lyv~~-~dg~V~vi 223 (567)
T 1qks_A 162 DWDLENLFSVTLRDAGQIALIDGST----------------YEIKTVLDTGYAVHISRLSA-SGRYLFVIG-RDGKVNMI 223 (567)
T ss_dssp CCCGGGEEEEEETTTTEEEEEETTT----------------CCEEEEEECSSCEEEEEECT-TSCEEEEEE-TTSEEEEE
T ss_pred ccCCCceEEEEeCCCCeEEEEECCC----------------CeEEEEEeCCCCccceEECC-CCCEEEEEc-CCCeEEEE
Confidence 34556677765 568999998721 12233445677788999999 788999887 45456666
Q ss_pred cC---CCceeeeeeeeeccCCceEEEeEEe----cCCCceEEEEec---CeEEEEeCcCCCCCCcEEEEcCC----C---
Q 047869 1893 NP---RGEVTDRLAIELALQGAYIRRVDWV----PGSPVQLMVVTN---KFVKIYDLSQDNISPLHYFTLPD----D--- 1955 (2233)
Q Consensus 1893 ss---~GeV~DRL~LeL~Leg~fIIKa~WL----PGSQt~LAVVT~---~FVKIYDLS~D~lSPvyyF~Lps----G--- 1955 (2233)
+. +++++.++.+ |..-+.+.+- |..+ .+.|++ ..|.|||. ....|+..+.+.. +
T Consensus 224 D~~~~t~~~v~~i~~-----G~~P~~ia~s~~~~pDGk--~l~v~n~~~~~v~ViD~--~t~~~~~~i~~~~~~~~~~~~ 294 (567)
T 1qks_A 224 DLWMKEPTTVAEIKI-----GSEARSIETSKMEGWEDK--YAIAGAYWPPQYVIMDG--ETLEPKKIQSTRGMTYDEQEY 294 (567)
T ss_dssp ETTSSSCCEEEEEEC-----CSEEEEEEECCSTTCTTT--EEEEEEEETTEEEEEET--TTCCEEEEEECCEECTTTCCE
T ss_pred ECCCCCCcEeEEEec-----CCCCceeEEccccCCCCC--EEEEEEccCCeEEEEEC--CCCcEEEEEeccccccccccc
Confidence 55 6666654432 4455666776 2332 333444 57899995 4567777666532 1
Q ss_pred --CeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccceeeEEec
Q 047869 1956 --MIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSFQ 2029 (2233)
Q Consensus 1956 --kIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY~ 2029 (2233)
..+-+.++...++..+++-....|.|..=+.+... + ...++ ++. ...-..+-++++-+.+|++-.
T Consensus 295 ~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~-~--~~v~~---i~~---~~~~~d~~~~pdgr~~~va~~ 361 (567)
T 1qks_A 295 HPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLN-N--LKTTE---ISA---ERFLHDGGLDGSHRYFITAAN 361 (567)
T ss_dssp ESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSS-E--EEEEE---EEC---CSSEEEEEECTTSCEEEEEEG
T ss_pred cCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCc-c--ceeee---eec---cccccCceECCCCCEEEEEeC
Confidence 12344555556677788888888999876655221 1 11111 111 112223457777777777653
No 154
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=86.07 E-value=3 Score=46.12 Aligned_cols=199 Identities=12% Similarity=0.066 Sum_probs=108.4
Q ss_pred CceEEEe-eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCc-cceEEeeccc-ceEEEEecCC
Q 047869 1819 RGRLAVG-EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIV-ENYLTVAGYE-DCQVLTLNPR 1895 (2233)
Q Consensus 1819 rGrLAVa-EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~n-EdyLAVcGLk-DC~VLTfss~ 1895 (2233)
+..||.+ ..++|.|+++..- . .....++. .-.-.|.+++|+|.. +.+||.++.. .+.+..+...
T Consensus 71 ~~~l~s~s~D~~v~iWd~~~~----~----~~~~~~~~-----~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~ 137 (316)
T 3bg1_A 71 GNILASCSYDRKVIIWREENG----T----WEKSHEHA-----GHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGE 137 (316)
T ss_dssp SSCEEEEETTSCEEEECCSSS----C----CCEEEEEC-----CCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSS
T ss_pred CCEEEEEECCCEEEEEECCCC----c----ceEEEEcc-----CCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCC
Confidence 3456644 7788999987421 0 00000110 011246789999974 5677766643 3445555433
Q ss_pred CceeeeeeeeeccCCceEEEeEEecCCC----------------ceEEEEecC-eEEEEeCcCCC-CCCcEEEEcCCCCe
Q 047869 1896 GEVTDRLAIELALQGAYIRRVDWVPGSP----------------VQLMVVTNK-FVKIYDLSQDN-ISPLHYFTLPDDMI 1957 (2233)
Q Consensus 1896 GeV~DRL~LeL~Leg~fIIKa~WLPGSQ----------------t~LAVVT~~-FVKIYDLS~D~-lSPvyyF~LpsGkI 1957 (2233)
+... ... .+.-...-|..+.|-|... ..||....+ .|||||+.... ..+...+.--.+.|
T Consensus 138 ~~~~-~~~-~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V 215 (316)
T 3bg1_A 138 GQWE-VKK-INNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWV 215 (316)
T ss_dssp SCEE-ECC-BTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCE
T ss_pred CCcc-eee-eeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCce
Confidence 2211 000 0011134567788888631 345555544 89999995432 12444444446778
Q ss_pred eEEEEEEec-CCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccceeeEEecCCcEEEE
Q 047869 1958 VDATLVIAS-RGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSFQDGTTLVG 2036 (2233)
Q Consensus 1958 rDaTfv~~e-~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY~~G~Sf~a 2036 (2233)
++++|-... .....++.-|.+|.|..-++...... ... ...+. ...+.-.++-||++-++|..+-.+|+..+=
T Consensus 216 ~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~-~~~-~~~~~----~~~~~v~~v~~sp~g~~las~~~D~~v~lw 289 (316)
T 3bg1_A 216 RDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSN-TWS-PKLLH----KFNDVVWHVSWSITANILAVSGGDNKVTLW 289 (316)
T ss_dssp EEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCC-CCB-CCEEE----ECSSCEEEEEECTTTCCEEEEESSSCEEEE
T ss_pred EEEEecCCCCCCCceEEEEcCCCeEEEEEccCcccc-chh-hhhhh----cCCCcEEEEEEcCCCCEEEEEcCCCeEEEE
Confidence 888865321 11257888899999998877632111 000 01111 113345678889888888877778877665
Q ss_pred Ec
Q 047869 2037 RL 2038 (2233)
Q Consensus 2037 ~L 2038 (2233)
..
T Consensus 290 ~~ 291 (316)
T 3bg1_A 290 KE 291 (316)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 155
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=84.76 E-value=83 Score=38.61 Aligned_cols=130 Identities=15% Similarity=0.284 Sum_probs=76.8
Q ss_pred cccccccccccc--ccceEEEEeecccCccceEEeecccce-----EEEEecCC-Cceeeeeeeeecc------------
Q 047869 1849 ADKTNVKPLSRN--IVRFEIVHLAFNSIVENYLTVAGYEDC-----QVLTLNPR-GEVTDRLAIELAL------------ 1908 (2233)
Q Consensus 1849 kdKlTLtrLSsa--~VpFeVlsLafNP~nEdyLAVcGLkDC-----~VLTfss~-GeV~DRL~LeL~L------------ 1908 (2233)
++++|+..+-.. ..+-.|.+++|+| ++++||..+.++- .|..++.. |+....+..+..-
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~Sp-dG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 98 (741)
T 2ecf_A 20 AEKLTLEAITGPLPLSGPTLMKPKVAP-DGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKA 98 (741)
T ss_dssp --CCCHHHHTSSSCTTCCCCEEEEECT-TSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC------------
T ss_pred cccccHHHHhccCCcCCCCCCCceEec-CCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhh
Confidence 455666545321 2244577899998 8899999988432 55555543 4332222111100
Q ss_pred -------CC-ceEEEeEEecCCCceEEEEecCeEEEEeCcCC---CCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEec
Q 047869 1909 -------QG-AYIRRVDWVPGSPVQLMVVTNKFVKIYDLSQD---NISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSE 1977 (2233)
Q Consensus 1909 -------eg-~fIIKa~WLPGSQt~LAVVT~~FVKIYDLS~D---~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS 1977 (2233)
.| ..|..+.|=|..+. |+++....|.|||+... ...+ +.-..+.+...+ +.++|+.+.++ +
T Consensus 99 ~~~~~~~~~~~~v~~~~~SpDg~~-l~~~~~~~i~~~d~~~~~~~~~~~---l~~~~~~~~~~~--~SPDG~~la~~--~ 170 (741)
T 2ecf_A 99 RRERQRIAAMTGIVDYQWSPDAQR-LLFPLGGELYLYDLKQEGKAAVRQ---LTHGEGFATDAK--LSPKGGFVSFI--R 170 (741)
T ss_dssp --------CCEESCCCEECTTSSE-EEEEETTEEEEEESSSCSTTSCCB---CCCSSSCEEEEE--ECTTSSEEEEE--E
T ss_pred hhhhhhhccccCcceeEECCCCCE-EEEEeCCcEEEEECCCCCcceEEE---cccCCccccccc--CCCCCCEEEEE--e
Confidence 01 23678899999865 77777799999999876 3322 111234565554 35788754443 4
Q ss_pred CCceEEEEec
Q 047869 1978 CGSLYRLELS 1987 (2233)
Q Consensus 1978 ~G~LY~Qels 1987 (2233)
++.||.-++.
T Consensus 171 ~~~i~~~d~~ 180 (741)
T 2ecf_A 171 GRNLWVIDLA 180 (741)
T ss_dssp TTEEEEEETT
T ss_pred CCcEEEEecC
Confidence 6789987765
No 156
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=82.86 E-value=78 Score=36.85 Aligned_cols=151 Identities=13% Similarity=0.159 Sum_probs=84.2
Q ss_pred EEEEeecccCccceEEeecccc--eEEEEecC-CCceeeeeeeeeccCCceEEEeEEecCCCceEEEEe----cCeEEEE
Q 047869 1865 EIVHLAFNSIVENYLTVAGYED--CQVLTLNP-RGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVT----NKFVKIY 1937 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGLkD--C~VLTfss-~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT----~~FVKIY 1937 (2233)
.|.+++|+| ++++||.++... ..|..++. .|+.. + +.-....+..+.|-|..+. ||++. ...|.+|
T Consensus 180 ~v~~~~~Sp-dg~~la~~s~~~~~~~i~~~d~~tg~~~-~----l~~~~~~~~~~~~spdg~~-la~~~~~~g~~~i~~~ 252 (415)
T 2hqs_A 180 PLMSPAWSP-DGSKLAYVTFESGRSALVIQTLANGAVR-Q----VASFPRHNGAPAFSPDGSK-LAFALSKTGSLNLYVM 252 (415)
T ss_dssp CEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCEE-E----EECCSSCEEEEEECTTSSE-EEEEECTTSSCEEEEE
T ss_pred cceeeEEcC-CCCEEEEEEecCCCcEEEEEECCCCcEE-E----eecCCCcccCEEEcCCCCE-EEEEEecCCCceEEEE
Confidence 478999999 788999998763 34444443 34332 1 1222346889999998765 66444 2358889
Q ss_pred eCcCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCC--ceEEEEecccCCCccccceeeeecccccccCCeEEE
Q 047869 1938 DLSQDNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECG--SLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSL 2015 (2233)
Q Consensus 1938 DLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G--~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSV 2015 (2233)
|+..... ..+.-..+.+...+ +.++|+.+++.....| .||..++.. +. ...++ . ......++
T Consensus 253 d~~~~~~---~~l~~~~~~~~~~~--~spdg~~l~~~s~~~g~~~i~~~d~~~-~~--~~~l~------~--~~~~~~~~ 316 (415)
T 2hqs_A 253 DLASGQI---RQVTDGRSNNTEPT--WFPDSQNLAFTSDQAGRPQVYKVNING-GA--PQRIT------W--EGSQNQDA 316 (415)
T ss_dssp ETTTCCE---EECCCCSSCEEEEE--ECTTSSEEEEEECTTSSCEEEEEETTS-SC--CEECC------C--SSSEEEEE
T ss_pred ECCCCCE---EeCcCCCCcccceE--ECCCCCEEEEEECCCCCcEEEEEECCC-CC--EEEEe------c--CCCcccCe
Confidence 9876442 22222233444443 4578875544443355 677666542 11 11111 1 01224468
Q ss_pred EeccccceeeEEec-CCcEEEEEc
Q 047869 2016 YFSSTYKLLFLSFQ-DGTTLVGRL 2038 (2233)
Q Consensus 2016 yYS~tl~LLF~SY~-~G~Sf~a~L 2038 (2233)
.+|++-+.|+++-. +|..-+...
T Consensus 317 ~~spdG~~l~~~~~~~g~~~i~~~ 340 (415)
T 2hqs_A 317 DVSSDGKFMVMVSSNGGQQHIAKQ 340 (415)
T ss_dssp EECTTSSEEEEEEECSSCEEEEEE
T ss_pred EECCCCCEEEEEECcCCceEEEEE
Confidence 89999887766554 443333333
No 157
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=81.84 E-value=99 Score=42.08 Aligned_cols=242 Identities=17% Similarity=0.196 Sum_probs=131.2
Q ss_pred ccCccceEEeecccceEEEEecCCCceeeeeeee-eccCCceEEEeEEecCCCceEEEEecCeEEEEeCcCCCCCCcEEE
Q 047869 1872 NSIVENYLTVAGYEDCQVLTLNPRGEVTDRLAIE-LALQGAYIRRVDWVPGSPVQLMVVTNKFVKIYDLSQDNISPLHYF 1950 (2233)
Q Consensus 1872 NP~nEdyLAVcGLkDC~VLTfss~GeV~DRL~Le-L~Leg~fIIKa~WLPGSQt~LAVVT~~FVKIYDLS~D~lSPvyyF 1950 (2233)
+...++||++.-..+=.||.++. +-.+.+... +..+..-|--. =+++. .+.=||...|+++|.... ..+..+
T Consensus 436 ~~~~~~yLvlS~~~~T~Vl~i~~--e~veev~~~gf~~~~~TL~~~-~l~~~--~ivQVt~~~Irli~~~~~--~~~~~w 508 (1158)
T 3ei3_A 436 NRETDDTLVLSFVGQTRVLMLNG--EEVEETELMGFVDDQQTFFCG-NVAHQ--QLIQITSASVRLVSQEPK--ALVSEW 508 (1158)
T ss_dssp SCSSCCEEEEEETTEEEEEEEET--TEEEEECCTTCCSSSCEEEEE-EETTT--EEEEEESSCEEEEESSSC--CEEEEE
T ss_pred CCCCCCEEEEECCCCeEEEEEeC--CcccccccccccCCCCcEEEE-EcCCC--eEEEEecCEEEEEECCCC--eEEEEE
Confidence 34578899999999999999963 233333221 11111111111 12332 577799999999997654 246677
Q ss_pred EcCCCC-eeEEEEEEecCCcEEEEEEecCCceEEEEeccc-----------C-----------------CCccccc----
Q 047869 1951 TLPDDM-IVDATLVIASRGKMFLIVLSECGSLYRLELSVE-----------G-----------------NVGATPL---- 1997 (2233)
Q Consensus 1951 ~LpsGk-IrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s-----------~-----------------d~g~~~l---- 1997 (2233)
..|.|+ |..|+ .. +. .+++. +.|.|++-++... . +...+-.
T Consensus 509 ~~p~~~~I~~As-~n---~~-~vvva-~g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~ 582 (1158)
T 3ei3_A 509 KEPQAKNISVAS-CN---SS-QVVVA-VGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDI 582 (1158)
T ss_dssp CCTTCCCCCEEE-EC---SS-EEEEE-ETTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTT
T ss_pred ECCCCCEEEEEE-eC---CC-EEEEE-ECCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCC
Confidence 778875 76666 21 22 23333 4677776554310 0 0000000
Q ss_pred -eeeeecccccc------c----CCeEEEEeccccceeeEEecCCcEEEEEcCCCcccccceeEEEEccCCCCCCCcccc
Q 047869 1998 -KEIIQFNDREI------H----AKGLSLYFSSTYKLLFLSFQDGTTLVGRLSPNAASLSEVSYVFEEQDGKLRSAGLHR 2066 (2233)
Q Consensus 1998 -tEvvq~~~~q~------~----~~GVSVyYS~tl~LLF~SY~~G~Sf~a~Ls~~~~sv~eis~Vfe~~~gk~~~a~L~q 2066 (2233)
-.++++++.+. . ..-+.+..-..-..||+...+|..+-..++..++.++...+.+.. .++..++.
T Consensus 583 tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG----~~pv~L~~ 658 (1158)
T 3ei3_A 583 SARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLG----TQPTVLRT 658 (1158)
T ss_dssp EEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEECC----SSCCEEEE
T ss_pred EEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEcC----CCceEEEE
Confidence 01122221100 0 001222222233568999999999888888777666665555543 12333555
Q ss_pred eeeccCCCceEEEEeccCCCceEEEEecCCceeeeccccccCCCCCeEEEEEeecCCCCCeEEEEEeeCCceeEEec
Q 047869 2067 WKELLASSGLFFCFSSLKSNAAVAVSLGTNELIAQNMRHAAGSTSPLVGVTAYKPLSKDKVHCLVLHDDGSLQIYSH 2143 (2233)
Q Consensus 2067 WsEV~~hPGLf~cls~~~sn~pvvv~l~pd~I~iQeiK~~~~sSs~vdgva~y~p~s~~rttlLLLcEDGSLrIYsa 2143 (2233)
.. ..+.+++|+| +..|-++....+.+..-+ -+-..+..++.++. .+.+-.+++.+++.|||..-
T Consensus 659 ~~-~~~~~~V~a~-----s~rp~liy~~~~~l~~s~-----l~~~~v~~~~~F~s--e~~~~g~v~~~~~~LrI~~i 722 (1158)
T 3ei3_A 659 FR-SLSTTNVFAC-----SDRPTVIYSSNHKLVFSN-----VNLKEVNYMCPLNS--DGYPDSLALANNSTLTIGTI 722 (1158)
T ss_dssp EE-SSSCEEEEEE-----SSSCEEEEESSSSEEEEE-----BSSSCCCEEEEECC--SSSTTEEEEECSSCEEEEEE
T ss_pred Ee-eCCceeEEEE-----CCCCEEEEEcCCceEEec-----cChHHhceEeccCc--ccCCCcEEEEcCCceEEEEe
Confidence 54 3455788777 345666655545444322 22233445555322 34677888999999999874
No 158
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=81.77 E-value=51 Score=40.21 Aligned_cols=120 Identities=10% Similarity=0.144 Sum_probs=63.3
Q ss_pred CceEEEeEEecCCCceEEEEec-----CeEEEEeCcCCCCCCcEEEEcCCCCee--EEEEEEecCCcEEEEE-EecCC--
Q 047869 1910 GAYIRRVDWVPGSPVQLMVVTN-----KFVKIYDLSQDNISPLHYFTLPDDMIV--DATLVIASRGKMFLIV-LSECG-- 1979 (2233)
Q Consensus 1910 g~fIIKa~WLPGSQt~LAVVT~-----~FVKIYDLS~D~lSPvyyF~LpsGkIr--DaTfv~~e~G~~~ILV-LSS~G-- 1979 (2233)
+.++..+.|-|..+ .|+..++ ..|.+||+.......+.... ..+.+. +..+.+.++|+.++++ ...+|
T Consensus 254 ~~~~~~~~~SpDg~-~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~-~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 331 (723)
T 1xfd_A 254 EYYITMVKWATSTK-VAVTWLNRAQNVSILTLCDATTGVCTKKHEDE-SEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGR 331 (723)
T ss_dssp SEEEEEEEESSSSE-EEEEEEETTSCEEEEEEEETTTCCEEEEEEEE-CSSCCCCCCCCCEECTTSCSEEEEEEECCSSS
T ss_pred cceeEEEEEeCCCe-EEEEEEcCCCCeEEEEEEeCCCCcceEEEEec-cCCEEeccCCCceEcCCCCeEEEEEecccCCC
Confidence 56799999999987 3544433 36889998765533322211 122222 1233445788766665 44566
Q ss_pred ----ceEEEEecccCC-CccccceeeeecccccccCCeEE-EEeccccceeeEEecC---CcEEEEEcC
Q 047869 1980 ----SLYRLELSVEGN-VGATPLKEIIQFNDREIHAKGLS-LYFSSTYKLLFLSFQD---GTTLVGRLS 2039 (2233)
Q Consensus 1980 ----~LY~Qels~s~d-~g~~~ltEvvq~~~~q~~~~GVS-VyYS~tl~LLF~SY~~---G~Sf~a~Ls 2039 (2233)
.||.-++...+. .....++. + .....+ +.+|++-+.|+++..+ |+..+-.++
T Consensus 332 ~~~~~l~~~d~~~~~~~~~~~~l~~------~--~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~ 392 (723)
T 1xfd_A 332 GKFYHITVSSSQPNSSNDNIQSITS------G--DWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSAN 392 (723)
T ss_dssp SCEEEEEEECSSCCSSSCCCCBSCC------S--SSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEEC
T ss_pred cceeEEEEEeccCCCCccceeEeec------C--CeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEe
Confidence 566555221211 00111211 1 111223 5789998888665544 555555554
No 159
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=81.73 E-value=9.2 Score=41.23 Aligned_cols=148 Identities=10% Similarity=0.148 Sum_probs=82.4
Q ss_pred cccCceEEE--eeCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecccceEEEEec
Q 047869 1816 VSSRGRLAV--GEGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYEDCQVLTLN 1893 (2233)
Q Consensus 1816 as~rGrLAV--aEgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLkDC~VLTfs 1893 (2233)
.+..+++.| ...++|.++++..- +. ..+++ +.. .+.+.+++++| ++++++|.+-.+-.|..++
T Consensus 7 ~~~~~~~~v~~~~~~~v~~~d~~~~--~~------~~~~~---~~~---~~~~~~~~~s~-dg~~~~v~~~~~~~i~~~d 71 (349)
T 1jmx_B 7 LKAGHEYMIVTNYPNNLHVVDVASD--TV------YKSCV---MPD---KFGPGTAMMAP-DNRTAYVLNNHYGDIYGID 71 (349)
T ss_dssp CCTTCEEEEEEETTTEEEEEETTTT--EE------EEEEE---CSS---CCSSCEEEECT-TSSEEEEEETTTTEEEEEE
T ss_pred ccCCCEEEEEeCCCCeEEEEECCCC--cE------EEEEe---cCC---CCCCceeEECC-CCCEEEEEeCCCCcEEEEe
Confidence 344555544 37889999987421 00 01111 111 01245788888 5577877776666666665
Q ss_pred C-CCceeeeeeeeec--cCCceEEEeEEecCCCceEEEEe-------------cCeEEEEeCcCCC-CCCcEEEEcCCCC
Q 047869 1894 P-RGEVTDRLAIELA--LQGAYIRRVDWVPGSPVQLMVVT-------------NKFVKIYDLSQDN-ISPLHYFTLPDDM 1956 (2233)
Q Consensus 1894 s-~GeV~DRL~LeL~--Leg~fIIKa~WLPGSQt~LAVVT-------------~~FVKIYDLS~D~-lSPvyyF~LpsGk 1956 (2233)
. .|++..++.+.-. ..+..+..+.|-|..+. |+++. ...|.|||+.... ......+..|. .
T Consensus 72 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~-l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-~ 149 (349)
T 1jmx_B 72 LDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKE-VYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPR-Q 149 (349)
T ss_dssp TTTTEEEEEEESCCSTTEEEECSSCEEECTTSSE-EEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCS-S
T ss_pred CCCCcEEEEEEcccccccccccccceEECCCCCE-EEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCC-c
Confidence 4 4665555443210 00344667789988764 55555 3789999997633 23445555554 3
Q ss_pred eeEEEEEEecCCcEEEEEEecCCceEEEEe
Q 047869 1957 IVDATLVIASRGKMFLIVLSECGSLYRLEL 1986 (2233)
Q Consensus 1957 IrDaTfv~~e~G~~~ILVLSS~G~LY~Qel 1986 (2233)
+...+ +.++|+ +++. .+.||.-++
T Consensus 150 ~~~~~--~s~dg~--l~~~--~~~i~~~d~ 173 (349)
T 1jmx_B 150 VYLMR--AADDGS--LYVA--GPDIYKMDV 173 (349)
T ss_dssp CCCEE--ECTTSC--EEEE--SSSEEEECT
T ss_pred cccee--ECCCCc--EEEc--cCcEEEEeC
Confidence 55444 356776 4443 344665544
No 160
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=81.30 E-value=52 Score=35.18 Aligned_cols=148 Identities=16% Similarity=0.160 Sum_probs=81.7
Q ss_pred ceecccCceEEEee--CCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecccceEEE
Q 047869 1813 LLSVSSRGRLAVGE--GDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYEDCQVL 1890 (2233)
Q Consensus 1813 LLSas~rGrLAVaE--gdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLkDC~VL 1890 (2233)
-|..+..|+++|+. .++|.+++...-. .... ....-.-.+.+|+++|. ++ |.|++..+-.|.
T Consensus 125 ~i~~~~~g~l~v~~~~~~~i~~~~~~g~~---------~~~~-----~~~~~~~~p~~i~~~~~-g~-l~v~~~~~~~i~ 188 (286)
T 1q7f_A 125 GVTVDNKGRIIVVECKVMRVIIFDQNGNV---------LHKF-----GCSKHLEFPNGVVVNDK-QE-IFISDNRAHCVK 188 (286)
T ss_dssp EEEECTTSCEEEEETTTTEEEEECTTSCE---------EEEE-----ECTTTCSSEEEEEECSS-SE-EEEEEGGGTEEE
T ss_pred EEEEeCCCCEEEEECCCCEEEEEcCCCCE---------EEEe-----CCCCccCCcEEEEECCC-CC-EEEEECCCCEEE
Confidence 46667778888874 5688888753100 0001 00000112568899884 34 666766666777
Q ss_pred EecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEe--cC-eEEEEeCcCCCCCCcEEEEcCCCC--eeEEEEEEe
Q 047869 1891 TLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVT--NK-FVKIYDLSQDNISPLHYFTLPDDM--IVDATLVIA 1965 (2233)
Q Consensus 1891 Tfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT--~~-FVKIYDLS~D~lSPvyyF~LpsGk--IrDaTfv~~ 1965 (2233)
.++.+|.....+..+.. ...+..+..-|.- .|.|++ +. .|++||..- .....+....+. +.+.+ ..
T Consensus 189 ~~~~~g~~~~~~~~~g~--~~~p~~i~~d~~G--~l~v~~~~~~~~i~~~~~~g---~~~~~~~~~~~~~~~~~i~--~~ 259 (286)
T 1q7f_A 189 VFNYEGQYLRQIGGEGI--TNYPIGVGINSNG--EILIADNHNNFNLTIFTQDG---QLISALESKVKHAQCFDVA--LM 259 (286)
T ss_dssp EEETTCCEEEEESCTTT--SCSEEEEEECTTC--CEEEEECSSSCEEEEECTTS---CEEEEEEESSCCSCEEEEE--EE
T ss_pred EEcCCCCEEEEEccCCc--cCCCcEEEECCCC--CEEEEeCCCCEEEEEECCCC---CEEEEEcccCCCCcceeEE--EC
Confidence 78888876544322110 1456666666654 455555 33 899999532 234444443322 33433 35
Q ss_pred cCCcEEEEEEecCCceEEEEec
Q 047869 1966 SRGKMFLIVLSECGSLYRLELS 1987 (2233)
Q Consensus 1966 e~G~~~ILVLSS~G~LY~Qels 1987 (2233)
++|+ ++|.+.++.|+.-++.
T Consensus 260 ~~g~--l~vs~~~~~v~v~~~~ 279 (286)
T 1q7f_A 260 DDGS--VVLASKDYRLYIYRYV 279 (286)
T ss_dssp TTTE--EEEEETTTEEEEEECS
T ss_pred CCCc--EEEECCCCeEEEEEcc
Confidence 6774 4445677777765544
No 161
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=80.26 E-value=1.3e+02 Score=37.54 Aligned_cols=117 Identities=13% Similarity=0.180 Sum_probs=68.1
Q ss_pred eEEEEeecccCccceEEee----cccceEEEEecCC-CceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC------
Q 047869 1864 FEIVHLAFNSIVENYLTVA----GYEDCQVLTLNPR-GEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK------ 1932 (2233)
Q Consensus 1864 FeVlsLafNP~nEdyLAVc----GLkDC~VLTfss~-GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~------ 1932 (2233)
+.+-+++++| ++++||.. |-..++|..++-. |+... ..+. +.-+..+.|-|..+. |+.++.+
T Consensus 125 ~~~~~~~~SP-Dg~~la~~~~~~G~~~~~i~v~d~~tg~~~~-~~~~----~~~~~~~~wspDg~~-l~~~~~~~~~~~~ 197 (710)
T 2xdw_A 125 VALRGYAFSE-DGEYFAYGLSASGSDWVTIKFMKVDGAKELP-DVLE----RVKFSCMAWTHDGKG-MFYNAYPQQDGKS 197 (710)
T ss_dssp EEEEEEEECT-TSSEEEEEEEETTCSCEEEEEEETTTTEEEE-EEEE----EECSCCEEECTTSSE-EEEEECCCCSSCC
T ss_pred EEEEEEEECC-CCCEEEEEEcCCCCceEEEEEEECCCCCCCc-cccc----CcccceEEEEeCCCE-EEEEEECCccccc
Confidence 3566889987 78888876 5554566666543 44332 2221 111345789999876 5555543
Q ss_pred -----------eEEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEec----CCceEEEEec
Q 047869 1933 -----------FVKIYDLSQDNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSE----CGSLYRLELS 1987 (2233)
Q Consensus 1933 -----------FVKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS----~G~LY~Qels 1987 (2233)
.|.++|+.......+.-|.-+........+...++|+.+++..+. ...||.-++.
T Consensus 198 ~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~ 267 (710)
T 2xdw_A 198 DGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQ 267 (710)
T ss_dssp SSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGG
T ss_pred cccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECc
Confidence 288889976654444445544322222233346788755555432 4578887776
No 162
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=80.15 E-value=1.1e+02 Score=37.04 Aligned_cols=143 Identities=15% Similarity=0.149 Sum_probs=77.1
Q ss_pred ccCceEEEe-eC-----CeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecc------
Q 047869 1817 SSRGRLAVG-EG-----DKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGY------ 1884 (2233)
Q Consensus 1817 s~rGrLAVa-Eg-----dKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGL------ 1884 (2233)
....+++|. ++ +.|+++|+. |.+.+.+-+++..= +|+++| ++++|.|+-.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~----------------t~~vv~~I~vG~~P-gia~Sp-Dgk~lyVan~~~~~~~ 143 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGS----------------TGRILGMTDGGFLP-HPVAAE-DGSFFAQASTVFERIA 143 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETT----------------TTEEEEEEEECSSC-EEEECT-TSSCEEEEEEEEEETT
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECC----------------CCEEEEEEECCCCC-ceEECC-CCCEEEEEeccccccc
Confidence 445678886 33 589898872 22233444444444 889988 6778888753
Q ss_pred ---cceEEEEec-CCCceeeeeeee-ec--cCCceEEEeEEecCCCceEEEEe---cCeEEEEeCcCCCCCCcEEEEcCC
Q 047869 1885 ---EDCQVLTLN-PRGEVTDRLAIE-LA--LQGAYIRRVDWVPGSPVQLMVVT---NKFVKIYDLSQDNISPLHYFTLPD 1954 (2233)
Q Consensus 1885 ---kDC~VLTfs-s~GeV~DRL~Le-L~--Leg~fIIKa~WLPGSQt~LAVVT---~~FVKIYDLS~D~lSPvyyF~Lps 1954 (2233)
++=.|.-|+ ..++++.++.+- .. +.|..-..+..-|..+. |.|+. ...|.|+|+....+- ..+.++.
T Consensus 144 ~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~-lyV~n~~~~~~VsVID~~t~kvv--~~I~v~g 220 (426)
T 3c75_H 144 RGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKN-LLFYQFSPAPAVGVVDLEGKTFD--RMLDVPD 220 (426)
T ss_dssp EEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSE-EEEEECSSSCEEEEEETTTTEEE--EEEECCS
T ss_pred cCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCE-EEEEecCCCCeEEEEECCCCeEE--EEEEcCC
Confidence 233444454 356777777663 11 11222223345555443 33322 357999999887653 3344432
Q ss_pred CCeeEEEEEEecCCcEEEEEEecCCceEEEEe
Q 047869 1955 DMIVDATLVIASRGKMFLIVLSECGSLYRLEL 1986 (2233)
Q Consensus 1955 GkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qel 1986 (2233)
. ..+ ..+|....+..+.+|.+++=..
T Consensus 221 --~---~~~-~p~g~~~~v~~~~dG~~~~V~~ 246 (426)
T 3c75_H 221 --C---YHI-FPASPTVFYMNCRDGSLARVDF 246 (426)
T ss_dssp --E---EEE-EEEETTEEEEEETTSSEEEEEC
T ss_pred --c---eee-ccCCCcEEEEEcCCCCEEEEEC
Confidence 1 112 2333344455666676665544
No 163
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=76.23 E-value=1.1e+02 Score=36.87 Aligned_cols=58 Identities=17% Similarity=0.157 Sum_probs=38.9
Q ss_pred ccceEEEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeCcCCC
Q 047869 1884 YEDCQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQDN 1943 (2233)
Q Consensus 1884 LkDC~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D~ 1943 (2233)
-+.+.+..|+++|++...+..+. ....+....=+||.+..||=...| .|||||+..-.
T Consensus 156 d~~V~~~~~s~dG~~~~s~~~~~--~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk 214 (356)
T 2w18_A 156 DQQVEVMTFAEDGGGKENQFLMP--PEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQ 214 (356)
T ss_dssp TCEEEEEEECTTSCEEEEEEECC--CSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCC
T ss_pred CCcEEEEEECCCCceeeeeccCC--CceeeEEeeccCCCCceEEEecCCCcEEEEECCCCc
Confidence 45566666777776655444332 244566777778988888766655 99999997643
No 164
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=75.14 E-value=1.7e+02 Score=36.46 Aligned_cols=192 Identities=10% Similarity=0.040 Sum_probs=100.7
Q ss_pred eecccC-ceEEEe-eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeeccc---CccceEEeecccceE
Q 047869 1814 LSVSSR-GRLAVG-EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNS---IVENYLTVAGYEDCQ 1888 (2233)
Q Consensus 1814 LSas~r-GrLAVa-EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP---~nEdyLAVcGLkDC~ 1888 (2233)
+..+.. ++++|+ +.++|+++++. ..+ .+.+.+-+++-.-.+|+|+| .++++|.|+.+..-.
T Consensus 202 v~~SpDGr~lyv~~~dg~V~viD~~----~~t----------~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~ 267 (567)
T 1qks_A 202 SRLSASGRYLFVIGRDGKVNMIDLW----MKE----------PTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQ 267 (567)
T ss_dssp EEECTTSCEEEEEETTSEEEEEETT----SSS----------CCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTE
T ss_pred eEECCCCCEEEEEcCCCeEEEEECC----CCC----------CcEeEEEecCCCCceeEEccccCCCCCEEEEEEccCCe
Confidence 334444 456665 67799999973 001 11223334455567999996 689999999988766
Q ss_pred EEEec-CCCceeeeeeeeec--------------------------------------------------c-CCceEEEe
Q 047869 1889 VLTLN-PRGEVTDRLAIELA--------------------------------------------------L-QGAYIRRV 1916 (2233)
Q Consensus 1889 VLTfs-s~GeV~DRL~LeL~--------------------------------------------------L-eg~fIIKa 1916 (2233)
|.-++ ..+++...+.+... . .+.|....
T Consensus 268 v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~ 347 (567)
T 1qks_A 268 YVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDG 347 (567)
T ss_dssp EEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEE
T ss_pred EEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCc
Confidence 65553 23333333322100 0 12344455
Q ss_pred EEecCCCceEEEEe--cCeEEEEeCcCCCCCCcEEEEcCC-CCe----eEEEEEEecCCcEEEEEEec--CCceEEEEec
Q 047869 1917 DWVPGSPVQLMVVT--NKFVKIYDLSQDNISPLHYFTLPD-DMI----VDATLVIASRGKMFLIVLSE--CGSLYRLELS 1987 (2233)
Q Consensus 1917 ~WLPGSQt~LAVVT--~~FVKIYDLS~D~lSPvyyF~Lps-GkI----rDaTfv~~e~G~~~ILVLSS--~G~LY~Qels 1987 (2233)
.|-|.... +.|+. ++-|.|+|+....+.. .++. |++ +-+.| +..+|.. +.+.+. +|.|-.-+..
T Consensus 348 ~~~pdgr~-~~va~~~sn~V~ViD~~t~kl~~----~i~vgg~~Phpg~g~~~-~~p~~g~-v~~t~~~g~~~Vsvid~~ 420 (567)
T 1qks_A 348 GLDGSHRY-FITAANARNKLVVIDTKEGKLVA----IEDTGGQTPHPGRGANF-VHPTFGP-VWATSHMGDDSVALIGTD 420 (567)
T ss_dssp EECTTSCE-EEEEEGGGTEEEEEETTTTEEEE----EEECSSSSBCCTTCEEE-EETTTEE-EEEEEBSSSSEEEEEECC
T ss_pred eECCCCCE-EEEEeCCCCeEEEEECCCCcEEE----EEeccCcCCCCccceee-ECCCCCc-EEEeCCCCCCeEEEecCC
Confidence 67776554 33333 4689999998665322 2344 332 23343 3454432 344443 3455443333
Q ss_pred ccCCCccccceeeeecccccccCCeEEEEeccccceeeEEec
Q 047869 1988 VEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSFQ 2029 (2233)
Q Consensus 1988 ~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY~ 2029 (2233)
. ..+.....+.+-.++.. +++++-|..++.-+.|+++..
T Consensus 421 ~-~~~~~~~~kvv~~i~~~--g~g~~~i~~~p~~~~l~v~~~ 459 (567)
T 1qks_A 421 P-EGHPDNAWKILDSFPAL--GGGSLFIKTHPNSQYLYVDAT 459 (567)
T ss_dssp T-TTCTTTBTSEEEEEECS--CSCCCCEECCTTCSEEEEECT
T ss_pred C-CCCccccCEEEEEEecC--CCCCEEEEeCCCCCeEEEecC
Confidence 1 22222333333333321 233365778888888888774
No 165
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=74.92 E-value=75 Score=42.15 Aligned_cols=105 Identities=14% Similarity=0.158 Sum_probs=56.8
Q ss_pred ecCeEEEEeCcCCCC----CC-cEEEEcCCCCeeEEEEEEe---cCCcEEEEEEecCCceEEEEecccC--CCcccccee
Q 047869 1930 TNKFVKIYDLSQDNI----SP-LHYFTLPDDMIVDATLVIA---SRGKMFLIVLSECGSLYRLELSVEG--NVGATPLKE 1999 (2233)
Q Consensus 1930 T~~FVKIYDLS~D~l----SP-vyyF~LpsGkIrDaTfv~~---e~G~~~ILVLSS~G~LY~Qels~s~--d~g~~~ltE 1999 (2233)
=++.+.|-+++.+.. .| +..|-.|. .|+-.++.+. +.+.++|+|++++|.+|+-.++... +.....-.+
T Consensus 80 ~~~~l~~~~~~~~~~~~~~~~~~l~~~Fp~-~i~p~~v~f~d~~~~~~L~v~vit~~~~Ly~l~l~~~~f~~~~~~~~~~ 158 (950)
T 4gq2_M 80 QNRTLTIFDVSLNSKKEPLSKFNVKIHFPS-NVMKDGVAFSFSEHSDTTIIYAITHARVLYYIRLSKTWFQLPDARLDDD 158 (950)
T ss_dssp TTTEEEEEECCCSCCSSCCCCEEEEEECSS-CEEEEEEEEEEETGGGEEEEEEEETTCCEEEEEECTHHHHSTTCCCCTT
T ss_pred cCCeEEEEEeeccCCccccCCeEEEEECCC-cccCCceEEeccCCCCeEEEEEEcCCCCEEEEEECHHHccCcccccccc
Confidence 333445555543322 22 24555555 6766544443 3578999999999999998887421 000000124
Q ss_pred eeecccc-cccCCeEEEEeccccceeeEEecCCcEEE
Q 047869 2000 IIQFNDR-EIHAKGLSLYFSSTYKLLFLSFQDGTTLV 2035 (2233)
Q Consensus 2000 vvq~~~~-q~~~~GVSVyYS~tl~LLF~SY~~G~Sf~ 2035 (2233)
|.+.... ..+.+-.-.-+...-+-|++|..||.-.-
T Consensus 159 W~~~~~p~~f~~r~p~~l~av~~~~l~Vsl~dGgLlr 195 (950)
T 4gq2_M 159 WCLCYRPISFLNQKPDLMAAISTSEICVSFFNGGLTK 195 (950)
T ss_dssp SEEEECCGGGTTSCEEEEEECSSSEEEEEETTSCEEE
T ss_pred ccccccCcCccCCCceEEEEEcCCeEEEEECCCCEEE
Confidence 4332211 12222233445556778889999887543
No 166
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=74.78 E-value=62 Score=34.87 Aligned_cols=71 Identities=8% Similarity=0.045 Sum_probs=41.1
Q ss_pred EEEeecccCccceEEeecc-------------cceEEEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC
Q 047869 1866 IVHLAFNSIVENYLTVAGY-------------EDCQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK 1932 (2233)
Q Consensus 1866 VlsLafNP~nEdyLAVcGL-------------kDC~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~ 1932 (2233)
+..++++| ++++|+|++- ..+.++.+. .|++...+.. .. ....+..+.|-|..+ +.+ +..
T Consensus 94 ~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~-~~~~~~~~~~-~~-~~~~~~~~~~s~dg~--l~~-~~~ 166 (349)
T 1jmx_B 94 MYSFAISP-DGKEVYATVNPTQRLNDHYVVKPPRLEVFSTA-DGLEAKPVRT-FP-MPRQVYLMRAADDGS--LYV-AGP 166 (349)
T ss_dssp SSCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEEGG-GGGGBCCSEE-EE-CCSSCCCEEECTTSC--EEE-ESS
T ss_pred ccceEECC-CCCEEEEEcccccccccccccCCCeEEEEECC-Cccccceeee-cc-CCCcccceeECCCCc--EEE-ccC
Confidence 45788888 6778988883 344444443 3333222211 11 122356667888876 444 455
Q ss_pred eEEEEeCcCCC
Q 047869 1933 FVKIYDLSQDN 1943 (2233)
Q Consensus 1933 FVKIYDLS~D~ 1943 (2233)
.|.+||+....
T Consensus 167 ~i~~~d~~~~~ 177 (349)
T 1jmx_B 167 DIYKMDVKTGK 177 (349)
T ss_dssp SEEEECTTTCC
T ss_pred cEEEEeCCCCc
Confidence 69999986543
No 167
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=71.78 E-value=78 Score=34.18 Aligned_cols=108 Identities=18% Similarity=0.217 Sum_probs=68.2
Q ss_pred EEeecccCccceEEeecccc--eEEEEecCCCce-eeeeeeeeccCCceEEEeEEecCCCceEEEEecCeEEEEeCcCCC
Q 047869 1867 VHLAFNSIVENYLTVAGYED--CQVLTLNPRGEV-TDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNKFVKIYDLSQDN 1943 (2233)
Q Consensus 1867 lsLafNP~nEdyLAVcGLkD--C~VLTfss~GeV-~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~FVKIYDLS~D~ 1943 (2233)
-+++++| ++++| |++..+ +.++.++..|.+ ..+-.+ ...+.++..+.+-|.. .|-|++..-|.+||..-
T Consensus 175 ~gi~~s~-dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~--~~~~~~p~~i~~d~~G--~l~v~~~~~v~~~~~~g-- 246 (296)
T 3e5z_A 175 NGLAFLP-SGNLL-VSDTGDNATHRYCLNARGETEYQGVHF--TVEPGKTDGLRVDAGG--LIWASAGDGVHVLTPDG-- 246 (296)
T ss_dssp EEEEECT-TSCEE-EEETTTTEEEEEEECSSSCEEEEEEEE--CCSSSCCCSEEEBTTS--CEEEEETTEEEEECTTS--
T ss_pred ccEEECC-CCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEe--eCCCCCCCeEEECCCC--CEEEEcCCeEEEECCCC--
Confidence 5788888 56677 776654 555556557887 544333 2234445556676655 47777788999999852
Q ss_pred CCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEec
Q 047869 1944 ISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELS 1987 (2233)
Q Consensus 1944 lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels 1987 (2233)
.....+.+|.+ +..++|. ..+|+ .++|.| .+.||.-+..
T Consensus 247 -~~~~~~~~~~~-~~~~~f~-~~d~~-~L~v~t-~~~l~~~~~~ 285 (296)
T 3e5z_A 247 -DELGRVLTPQT-TSNLCFG-GPEGR-TLYMTV-STEFWSIETN 285 (296)
T ss_dssp -CEEEEEECSSC-CCEEEEE-STTSC-EEEEEE-TTEEEEEECS
T ss_pred -CEEEEEECCCC-ceeEEEE-CCCCC-EEEEEc-CCeEEEEEcc
Confidence 34567788888 7777764 34553 455554 4667765543
No 168
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=68.25 E-value=2e+02 Score=34.37 Aligned_cols=140 Identities=13% Similarity=0.063 Sum_probs=80.3
Q ss_pred ceEEEEeecccCccceEEeecccc--eEEEEecCCCceeeeeeeeeccC-CceEEEeEEecCCCceEEEEec----CeEE
Q 047869 1863 RFEIVHLAFNSIVENYLTVAGYED--CQVLTLNPRGEVTDRLAIELALQ-GAYIRRVDWVPGSPVQLMVVTN----KFVK 1935 (2233)
Q Consensus 1863 pFeVlsLafNP~nEdyLAVcGLkD--C~VLTfss~GeV~DRL~LeL~Le-g~fIIKa~WLPGSQt~LAVVT~----~FVK 1935 (2233)
+..|-+++|+| ++++||..+.++ ..|..+ ..|+. -+ +.-. +..+..+.|-|+ + .++.... +..+
T Consensus 21 ~~~~~~~~~~~-DG~~la~~s~~~g~~~lw~~-~~g~~-~~----lt~~~~~~~~~~~~spd-~-~l~~~~~~~g~~~~~ 91 (582)
T 3o4h_A 21 AVEKYSLQGVV-DGDKLLVVGFSEGSVNAYLY-DGGET-VK----LNREPINSVLDPHYGVG-R-VILVRDVSKGAEQHA 91 (582)
T ss_dssp HSCEEEEEEEE-TTTEEEEEEEETTEEEEEEE-ETTEE-EE----CCSSCCSEECEECTTCS-E-EEEEEECSTTSCCEE
T ss_pred ccchheeecCC-CCCeEEEEEccCCceeEEEE-cCCCc-Ee----eecccccccccccCCCC-e-EEEEeccCCCCcceE
Confidence 45588999988 889999988644 556665 33332 11 1112 357888999998 3 2333332 4678
Q ss_pred EEeCcC--CCCCCcEEEEcC-CCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCe
Q 047869 1936 IYDLSQ--DNISPLHYFTLP-DDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKG 2012 (2233)
Q Consensus 1936 IYDLS~--D~lSPvyyF~Lp-sGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~G 2012 (2233)
||++.. +.-.+ .+. ...+...+ ...+|+..+++.++.+.++.-++. .+ ....+++ +.+
T Consensus 92 l~~~~~~~~g~~~----~l~~~~~~~~~~--~s~dg~~~~~~s~~~~~~~l~d~~-~g--~~~~l~~----------~~~ 152 (582)
T 3o4h_A 92 LFKVNTSRPGEEQ----RLEAVKPMRILS--GVDTGEAVVFTGATEDRVALYALD-GG--GLRELAR----------LPG 152 (582)
T ss_dssp EEEEETTSTTCCE----ECTTSCSBEEEE--EEECSSCEEEEEECSSCEEEEEEE-TT--EEEEEEE----------ESS
T ss_pred EEEEeccCCCccc----cccCCCCceeee--eCCCCCeEEEEecCCCCceEEEcc-CC--cEEEeec----------CCC
Confidence 888776 44332 232 22344333 345676667777777776644443 11 1111111 112
Q ss_pred EEEEeccccceeeEEecC
Q 047869 2013 LSLYFSSTYKLLFLSFQD 2030 (2233)
Q Consensus 2013 VSVyYS~tl~LLF~SY~~ 2030 (2233)
.++.+|++=+.|.++-.+
T Consensus 153 ~~~~~spDG~~la~~~~~ 170 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFF 170 (582)
T ss_dssp CEEEEEEETTEEEEEEEE
T ss_pred ceEEECCCCCEEEEEEEc
Confidence 678899998888765544
No 169
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=66.86 E-value=2.6e+02 Score=35.01 Aligned_cols=115 Identities=15% Similarity=0.202 Sum_probs=67.1
Q ss_pred EEEEeecccCccceEEe----ecccceEEEEecC-CCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-------
Q 047869 1865 EIVHLAFNSIVENYLTV----AGYEDCQVLTLNP-RGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK------- 1932 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAV----cGLkDC~VLTfss-~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~------- 1932 (2233)
.+-+++++| ++++||. -|-++..|..++- .|+.... . +++.....+.|- +.++ |+.++.+
T Consensus 130 ~l~~~~~Sp-Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~----~~~~k~~~~~Ws-Dg~~-l~y~~~~~~~~~~~ 201 (693)
T 3iuj_A 130 ALDQLSFSR-DGRILAYSLSLAGSDWREIHLMDVESKQPLET-P----LKDVKFSGISWL-GNEG-FFYSSYDKPDGSEL 201 (693)
T ss_dssp EEEEEEECT-TSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-E----EEEEESCCCEEE-TTTE-EEEEESSCCC----
T ss_pred EEEEEEECC-CCCEEEEEEecCCCceEEEEEEECCCCCCCcc-c----cCCceeccEEEe-CCCE-EEEEEecCcccccc
Confidence 455778888 7888886 4654455555543 3443221 1 222212345799 7665 6666554
Q ss_pred -------eEEEEeCcCCCCCCcEEEEcCC-CCeeEEEEEEecCCcEEEEEEecC---CceEEEEec
Q 047869 1933 -------FVKIYDLSQDNISPLHYFTLPD-DMIVDATLVIASRGKMFLIVLSEC---GSLYRLELS 1987 (2233)
Q Consensus 1933 -------FVKIYDLS~D~lSPvyyF~Lps-GkIrDaTfv~~e~G~~~ILVLSS~---G~LY~Qels 1987 (2233)
-|++++|..+....+.-|.-+. .......+...++|+.+++..++. +.||+-++.
T Consensus 202 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~ 267 (693)
T 3iuj_A 202 SARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLS 267 (693)
T ss_dssp ---CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETT
T ss_pred cccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECC
Confidence 3888899877666666666554 222223334468898666655543 478877765
No 170
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=66.70 E-value=1.4e+02 Score=32.11 Aligned_cols=184 Identities=10% Similarity=0.067 Sum_probs=92.9
Q ss_pred cceecccCceEEEee--CCeEEEEechhhhcccccCCccccccccccccccccce-EEEEeecccCccceEEee---cc-
Q 047869 1812 SLLSVSSRGRLAVGE--GDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRF-EIVHLAFNSIVENYLTVA---GY- 1884 (2233)
Q Consensus 1812 qLLSas~rGrLAVaE--gdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpF-eVlsLafNP~nEdyLAVc---GL- 1884 (2233)
..+..+..|++.|+. .+.|.+++...- ....+... ....++ .+-.+++.| ++++++.. |.
T Consensus 72 ~~l~~~~dg~l~v~~~~~~~i~~~d~~~g-----------~~~~~~~~-~~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~ 138 (296)
T 3e5z_A 72 NGHCLNKQGHLIACSHGLRRLERQREPGG-----------EWESIADS-FEGKKLNSPNDVCLAP-DGSLWFSDPTYGID 138 (296)
T ss_dssp EEEEECTTCCEEEEETTTTEEEEECSTTC-----------CEEEEECE-ETTEECCCCCCEEECT-TSCEEEEECSHHHH
T ss_pred ceeeECCCCcEEEEecCCCeEEEEcCCCC-----------cEEEEeec-cCCCCCCCCCCEEECC-CCCEEEECCccccc
Confidence 346667778888775 357877765210 00000000 001111 233577777 55554432 33
Q ss_pred ------------cceEEEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEe-cCeEEEEeCcCC-CC-CCcEE
Q 047869 1885 ------------EDCQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVT-NKFVKIYDLSQD-NI-SPLHY 1949 (2233)
Q Consensus 1885 ------------kDC~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT-~~FVKIYDLS~D-~l-SPvyy 1949 (2233)
..-.|+.+++.|.+..- .-...+..-+.|-|..+.. +.-+ ...|.+||+..+ .+ .....
T Consensus 139 ~~~~~~~~~~~~~~~~l~~~~~~g~~~~~-----~~~~~~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~ 212 (296)
T 3e5z_A 139 KPEEGYGGEMELPGRWVFRLAPDGTLSAP-----IRDRVKPNGLAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGVH 212 (296)
T ss_dssp CGGGSSCCCCCSSSCEEEEECTTSCEEEE-----ECCCSSEEEEEECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEE
T ss_pred cccccccccccCCCcEEEEECCCCCEEEe-----ecCCCCCccEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeE
Confidence 23588999888765321 1123445677898887664 3333 358999999733 22 11223
Q ss_pred EEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEe-ccccceeeEEe
Q 047869 1950 FTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYF-SSTYKLLFLSF 2028 (2233)
Q Consensus 1950 F~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyY-S~tl~LLF~SY 2028 (2233)
|....+.+... ..+++|+ ++|.+ .|.|+.-+.. + .....+..+.. --++.| +++.+.|+++-
T Consensus 213 ~~~~~~~p~~i--~~d~~G~--l~v~~-~~~v~~~~~~--g-----~~~~~~~~~~~-----~~~~~f~~~d~~~L~v~t 275 (296)
T 3e5z_A 213 FTVEPGKTDGL--RVDAGGL--IWASA-GDGVHVLTPD--G-----DELGRVLTPQT-----TSNLCFGGPEGRTLYMTV 275 (296)
T ss_dssp ECCSSSCCCSE--EEBTTSC--EEEEE-TTEEEEECTT--S-----CEEEEEECSSC-----CCEEEEESTTSCEEEEEE
T ss_pred eeCCCCCCCeE--EECCCCC--EEEEc-CCeEEEECCC--C-----CEEEEEECCCC-----ceeEEEECCCCCEEEEEc
Confidence 32233333333 2356675 33444 6666643321 1 12233333332 123455 67888899987
Q ss_pred cCC
Q 047869 2029 QDG 2031 (2233)
Q Consensus 2029 ~~G 2031 (2233)
.+|
T Consensus 276 ~~~ 278 (296)
T 3e5z_A 276 STE 278 (296)
T ss_dssp TTE
T ss_pred CCe
Confidence 654
No 171
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=66.69 E-value=2e+02 Score=35.79 Aligned_cols=200 Identities=10% Similarity=0.035 Sum_probs=0.0
Q ss_pred eEEEEeecccCccceEEe----ecccceEEEEecCCCceeeeeee-eeccCCceEEEeEEecCCCceEEEEecCe-----
Q 047869 1864 FEIVHLAFNSIVENYLTV----AGYEDCQVLTLNPRGEVTDRLAI-ELALQGAYIRRVDWVPGSPVQLMVVTNKF----- 1933 (2233)
Q Consensus 1864 FeVlsLafNP~nEdyLAV----cGLkDC~VLTfss~GeV~DRL~L-eL~Leg~fIIKa~WLPGSQt~LAVVT~~F----- 1933 (2233)
+.+.+++++| ++++||+ -|-++..|..++-.|.-. + .-.+++.....+.|-|..+..+......-
T Consensus 121 ~~~~~~~~SP-DG~~la~~~~~~G~~~~~i~v~dl~tg~~----~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~ 195 (695)
T 2bkl_A 121 VSLGTWAVSW-DGKKVAFAQKPNAADEAVLHVIDVDSGEW----SKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKV 195 (695)
T ss_dssp EEEEEEEECT-TSSEEEEEEEETTCSCCEEEEEETTTCCB----CSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCG
T ss_pred EEEEEEEECC-CCCEEEEEECCCCCceEEEEEEECCCCCC----cCCcccCcccccceEEecCCCEEEEEEecCCCCCcc
Q ss_pred --------EEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCC----ceEEEEecccCCCccccceeee
Q 047869 1934 --------VKIYDLSQDNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECG----SLYRLELSVEGNVGATPLKEII 2001 (2233)
Q Consensus 1934 --------VKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G----~LY~Qels~s~d~g~~~ltEvv 2001 (2233)
|++||+.......+.-|..+.+..........++| .+|++.+..+ .||.- ...+.....++.
T Consensus 196 ~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG-~~l~~~~~~~~~~~~l~~~---~~~~~~~~~l~~-- 269 (695)
T 2bkl_A 196 DERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDG-KYLFVYILRGWSENDVYWK---RPGEKDFRLLVK-- 269 (695)
T ss_dssp GGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTS-CCEEEEEEETTTEEEEEEE---CTTCSSCEEEEE--
T ss_pred ccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCC-CEEEEEEeCCCCceEEEEE---cCCCCceEEeec--
Q ss_pred ecccccccCCeEEEEeccccceeeEEec----CCcEEEEEcCCCcccccceeEEEEccCCCCCCCcccceeeccCCC-ce
Q 047869 2002 QFNDREIHAKGLSLYFSSTYKLLFLSFQ----DGTTLVGRLSPNAASLSEVSYVFEEQDGKLRSAGLHRWKELLASS-GL 2076 (2233)
Q Consensus 2002 q~~~~q~~~~GVSVyYS~tl~LLF~SY~----~G~Sf~a~Ls~~~~sv~eis~Vfe~~~gk~~~a~L~qWsEV~~hP-GL 2076 (2233)
..+++.-.-.+.=+ ++++-+ +++-+...++... ..+|.++..|. +-
T Consensus 270 -------~~~~~~~~~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~---------------------~~~~~~l~~~~~~~ 320 (695)
T 2bkl_A 270 -------GVGAKYEVHAWKDR-FYVLTDEGAPRQRVFEVDPAKPA---------------------RASWKEIVPEDSSA 320 (695)
T ss_dssp -------CSSCCEEEEEETTE-EEEEECTTCTTCEEEEEBTTBCS---------------------GGGCEEEECCCSSC
T ss_pred -------CCCceEEEEecCCc-EEEEECCCCCCCEEEEEeCCCCC---------------------ccCCeEEecCCCCC
Q ss_pred EEEEeccCCCceEEEEecCCceeeecc
Q 047869 2077 FFCFSSLKSNAAVAVSLGTNELIAQNM 2103 (2233)
Q Consensus 2077 f~cls~~~sn~pvvv~l~pd~I~iQei 2103 (2233)
.+.-....++..++.........+..+
T Consensus 321 ~l~~~~~~~~~lv~~~~~dg~~~l~~~ 347 (695)
T 2bkl_A 321 SLLSVSIVGGHLSLEYLKDATSEVRVA 347 (695)
T ss_dssp EEEEEEEETTEEEEEEEETTEEEEEEE
T ss_pred eEEEEEEECCEEEEEEEECCEEEEEEE
No 172
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=65.76 E-value=1.2e+02 Score=32.59 Aligned_cols=115 Identities=10% Similarity=0.154 Sum_probs=67.9
Q ss_pred EEeecc----cCccceEEeecc--cceEEEEecCCCceeeeeeee-eccCC-ceEEEeEEecCCCceEEEE--ecCeEEE
Q 047869 1867 VHLAFN----SIVENYLTVAGY--EDCQVLTLNPRGEVTDRLAIE-LALQG-AYIRRVDWVPGSPVQLMVV--TNKFVKI 1936 (2233)
Q Consensus 1867 lsLafN----P~nEdyLAVcGL--kDC~VLTfss~GeV~DRL~Le-L~Leg-~fIIKa~WLPGSQt~LAVV--T~~FVKI 1936 (2233)
.+++++ | ++++|.|++. +.+.++.+...|.+..+-.+. ..-.. .....+.+-|.. .|-|+ ++..|.+
T Consensus 175 ~~i~~~~~~d~-dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G--~l~v~~~~~~~i~~ 251 (314)
T 1pjx_A 175 NGIAVRHMNDG-RPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDN--NLLVANWGSSHIEV 251 (314)
T ss_dssp EEEEEEECTTS-CEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTC--CEEEEEETTTEEEE
T ss_pred ceEEEecccCC-CCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCC--CEEEEEcCCCEEEE
Confidence 456676 5 4557777755 445555554556655433222 11112 456777777755 45555 4578999
Q ss_pred EeCcCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEecc
Q 047869 1937 YDLSQDNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELSV 1988 (2233)
Q Consensus 1937 YDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~ 1988 (2233)
||.... .....+.++...+..++| .++|+...+..+..|.|+.-++..
T Consensus 252 ~d~~~g--~~~~~~~~~~~~~~~i~~--~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 252 FGPDGG--QPKMRIRCPFEKPSNLHF--KPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp ECTTCB--SCSEEEECSSSCEEEEEE--CTTSSEEEEEETTTTEEEEEECSS
T ss_pred EcCCCC--cEeEEEeCCCCCceeEEE--CCCCCEEEEEeCCCCeEEEEeCCC
Confidence 997622 245567778777877776 677864333334457888766653
No 173
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=65.03 E-value=1.6e+02 Score=32.96 Aligned_cols=179 Identities=11% Similarity=0.106 Sum_probs=91.2
Q ss_pred eecccCceEEEee--CCeEEEEechhhhcccccCCcccccccccccccccc-ceEEEEeecccCccceEEeecc-cceEE
Q 047869 1814 LSVSSRGRLAVGE--GDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIV-RFEIVHLAFNSIVENYLTVAGY-EDCQV 1889 (2233)
Q Consensus 1814 LSas~rGrLAVaE--gdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~V-pFeVlsLafNP~nEdyLAVcGL-kDC~V 1889 (2233)
+..+..|+++|.. .++|.++++...--... + +++...- .-...+|++ .++.|-|++. .+=.|
T Consensus 89 i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~--------i---~~g~~~~~~~~p~~i~~---~~~~lyv~~~~~~~~v 154 (328)
T 3dsm_A 89 IHFLSDEKAYVTQIWDYRIFIINPKTYEITGY--------I---ECPDMDMESGSTEQMVQ---YGKYVYVNCWSYQNRI 154 (328)
T ss_dssp EEEEETTEEEEEEBSCSEEEEEETTTTEEEEE--------E---ECTTCCTTTCBCCCEEE---ETTEEEEEECTTCCEE
T ss_pred EEEeCCCeEEEEECCCCeEEEEECCCCeEEEE--------E---EcCCccccCCCcceEEE---ECCEEEEEcCCCCCEE
Confidence 4454557888875 78999998753211111 1 1111000 001224555 5677888876 35567
Q ss_pred EEecC-CCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC------------eEEEEeCcCCCCCCcEEEEcCCCC
Q 047869 1890 LTLNP-RGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK------------FVKIYDLSQDNISPLHYFTLPDDM 1956 (2233)
Q Consensus 1890 LTfss-~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~------------FVKIYDLS~D~lSPvyyF~LpsGk 1956 (2233)
..++. .|++..++.+... ...+..-|. ..+.|+++. .|.+||..... .+..+.+|.|.
T Consensus 155 ~viD~~t~~~~~~i~~g~~-----p~~i~~~~d--G~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~--v~~~~~~~~g~ 225 (328)
T 3dsm_A 155 LKIDTETDKVVDELTIGIQ-----PTSLVMDKY--NKMWTITDGGYEGSPYGYEAPSLYRIDAETFT--VEKQFKFKLGD 225 (328)
T ss_dssp EEEETTTTEEEEEEECSSC-----BCCCEECTT--SEEEEEBCCBCTTCSSCBCCCEEEEEETTTTE--EEEEEECCTTC
T ss_pred EEEECCCCeEEEEEEcCCC-----ccceEEcCC--CCEEEEECCCccCCccccCCceEEEEECCCCe--EEEEEecCCCC
Confidence 77764 4777776654222 122333443 347777764 58888876544 34456677664
Q ss_pred -eeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccceeeEEe
Q 047869 1957 -IVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSF 2028 (2233)
Q Consensus 1957 -IrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY 2028 (2233)
.... .+..+|+ ++++..+ .+|.-+.. .+. ......+ +.. ...--.|-++++-+.|+++-
T Consensus 226 ~p~~l--a~~~d~~-~lyv~~~--~v~~~d~~-t~~---~~~~~~~--~~~--~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 226 WPSEV--QLNGTRD-TLYWINN--DIWRMPVE-ADR---VPVRPFL--EFR--DTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp CCEEE--EECTTSC-EEEEESS--SEEEEETT-CSS---CCSSCSB--CCC--SSCEEEEEECTTTCCEEEEE
T ss_pred CceeE--EEecCCC-EEEEEcc--EEEEEECC-CCc---eeeeeee--cCC--CCceEEEEEcCCCCeEEEEc
Confidence 3333 3345554 4445443 77755543 111 1101111 110 12223356777777788874
No 174
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=61.70 E-value=90 Score=34.37 Aligned_cols=77 Identities=9% Similarity=0.151 Sum_probs=45.5
Q ss_pred eEEEEeecccCccceEEeecccc-----eEEEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEec------C
Q 047869 1864 FEIVHLAFNSIVENYLTVAGYED-----CQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTN------K 1932 (2233)
Q Consensus 1864 FeVlsLafNP~nEdyLAVcGLkD-----C~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~------~ 1932 (2233)
..+.++.|+|.++++||++.-.. ..|..++..|.-...+. ....+..+..+.|-|..+. |+.++. .
T Consensus 188 ~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~--~~~~~~~~~~~~~spdg~~-l~~~~~~~~~~~~ 264 (396)
T 3c5m_A 188 AWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIK--EHAEGESCTHEFWIPDGSA-MAYVSYFKGQTDR 264 (396)
T ss_dssp SCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESS--CCCTTEEEEEEEECTTSSC-EEEEEEETTTCCE
T ss_pred cccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEee--ccCCCccccceEECCCCCE-EEEEecCCCCccc
Confidence 34668889997777777764321 45555555443222211 1112446788899998766 554443 3
Q ss_pred eEEEEeCcCCC
Q 047869 1933 FVKIYDLSQDN 1943 (2233)
Q Consensus 1933 FVKIYDLS~D~ 1943 (2233)
.|.+||+....
T Consensus 265 ~l~~~d~~~g~ 275 (396)
T 3c5m_A 265 VIYKANPETLE 275 (396)
T ss_dssp EEEEECTTTCC
T ss_pred eEEEEECCCCC
Confidence 39999987554
No 175
>2yvr_A Transcription intermediary factor 1-beta; ZF-B_BOX domain, structural genomics, NPPSFA; 1.80A {Homo sapiens}
Probab=61.01 E-value=3.8 Score=35.48 Aligned_cols=29 Identities=28% Similarity=0.637 Sum_probs=25.2
Q ss_pred ceEeeccCCCCCCceeehhhhhhhcCCCcEEEE
Q 047869 1604 HWYFCYTCDLTVSKGCCSVCAKVCHRGHRVVYS 1636 (2233)
Q Consensus 1604 ~~Y~C~TC~l~~~~GVC~aCA~vCHkGHdVvyl 1636 (2233)
--|.|.||.. .||..|...=|+||+++.+
T Consensus 17 l~lfC~~~~~----~iC~~C~~~~H~~H~~~~l 45 (50)
T 2yvr_A 17 LVLFCESCDT----LTCRDCQLNAHKDHQYQFL 45 (50)
T ss_dssp CCEEETTTTE----EECHHHHHTTTTTCCEEET
T ss_pred EEEEeCCCCE----EEecccCCCcCCCCceecH
Confidence 3588999876 8999999999999999875
No 176
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=58.92 E-value=2.6e+02 Score=32.45 Aligned_cols=137 Identities=15% Similarity=0.147 Sum_probs=79.2
Q ss_pred cceEEeeccc--c---eEEEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC----eEEEEeCcCCCCCC
Q 047869 1876 ENYLTVAGYE--D---CQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK----FVKIYDLSQDNISP 1946 (2233)
Q Consensus 1876 EdyLAVcGLk--D---C~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~----FVKIYDLS~D~lSP 1946 (2233)
+..+|.++-. + -.|..++.+|.-...+. -....+..+.|-|..+. ||.++.+ .|+|||+.....
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~----~~~~~v~~~~~Spdg~~-la~~s~~~~~~~i~~~d~~tg~~-- 215 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVH----RSPQPLMSPAWSPDGSK-LAYVTFESGRSALVIQTLANGAV-- 215 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSCEEEE----EESSCEEEEEECTTSSE-EEEEECTTSSCEEEEEETTTCCE--
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCCEEEe----CCCCcceeeEEcCCCCE-EEEEEecCCCcEEEEEECCCCcE--
Confidence 4455555442 1 45666665664322221 12457899999998764 7777665 899999976542
Q ss_pred cEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCc--eEEEEecccCCCccccceeeeecccccccCCeEEEEecccccee
Q 047869 1947 LHYFTLPDDMIVDATLVIASRGKMFLIVLSECGS--LYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLL 2024 (2233)
Q Consensus 1947 vyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~--LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LL 2024 (2233)
. .+.-..+.+...+ +.++|+..++..+.+|. ||.-++.. +. ...++ . ..+.-.++.||++-+.|
T Consensus 216 ~-~l~~~~~~~~~~~--~spdg~~la~~~~~~g~~~i~~~d~~~-~~--~~~l~------~--~~~~~~~~~~spdg~~l 281 (415)
T 2hqs_A 216 R-QVASFPRHNGAPA--FSPDGSKLAFALSKTGSLNLYVMDLAS-GQ--IRQVT------D--GRSNNTEPTWFPDSQNL 281 (415)
T ss_dssp E-EEECCSSCEEEEE--ECTTSSEEEEEECTTSSCEEEEEETTT-CC--EEECC------C--CSSCEEEEEECTTSSEE
T ss_pred E-EeecCCCcccCEE--EcCCCCEEEEEEecCCCceEEEEECCC-CC--EEeCc------C--CCCcccceEECCCCCEE
Confidence 2 2232345555444 45789877777777766 88777652 11 11111 1 12335578899988755
Q ss_pred eEEe-cCCcE
Q 047869 2025 FLSF-QDGTT 2033 (2233)
Q Consensus 2025 F~SY-~~G~S 2033 (2233)
.++- .+|+.
T Consensus 282 ~~~s~~~g~~ 291 (415)
T 2hqs_A 282 AFTSDQAGRP 291 (415)
T ss_dssp EEEECTTSSC
T ss_pred EEEECCCCCc
Confidence 5444 45643
No 177
>3ddt_A E3 ubiquitin-protein ligase TRIM63; zinc-binding motif, ring-like fold, coiled coil, cytoplasm, metal-binding, muscle protein, nucleus; 1.90A {Homo sapiens} SCOP: g.43.1.1 PDB: 3q1d_A
Probab=58.12 E-value=5.3 Score=34.47 Aligned_cols=28 Identities=29% Similarity=0.662 Sum_probs=23.0
Q ss_pred eEeeccCCCCCCceeehhhhh-hhcCCCcEEEE
Q 047869 1605 WYFCYTCDLTVSKGCCSVCAK-VCHRGHRVVYS 1636 (2233)
Q Consensus 1605 ~Y~C~TC~l~~~~GVC~aCA~-vCHkGHdVvyl 1636 (2233)
-+.|.+|.. .||..|.. .-|+||+++.+
T Consensus 18 ~lfC~~d~~----~iC~~C~~~~~H~~H~~~~l 46 (48)
T 3ddt_A 18 NIYCLTCEV----PTCSMCKVFGIHKACEVAPL 46 (48)
T ss_dssp CEEETTTTE----EECHHHHHHSTTTTSCEEEC
T ss_pred cEEcCCCCe----eEcccccCCCcCCCCcEEeC
Confidence 378998865 89999984 48999998865
No 178
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=57.65 E-value=2.4e+02 Score=31.58 Aligned_cols=148 Identities=14% Similarity=0.107 Sum_probs=81.6
Q ss_pred EEeecccCccceEEeecccceEEEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecCeEEEEeCcCCCCCC
Q 047869 1867 VHLAFNSIVENYLTVAGYEDCQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNKFVKIYDLSQDNISP 1946 (2233)
Q Consensus 1867 lsLafNP~nEdyLAVcGLkDC~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~FVKIYDLS~D~lSP 1946 (2233)
.+.++.|. ++.|.+++...-.|..++.+|....... . +..+..+.|.|.. .+.|++.+-|.+||+....+.
T Consensus 52 egp~~~~~-~~~l~~~d~~~~~i~~~d~~~~~~~~~~----~-~~~v~~i~~~~dg--~l~v~~~~gl~~~d~~~g~~~- 122 (326)
T 2ghs_A 52 EGPTFDPA-SGTAWWFNILERELHELHLASGRKTVHA----L-PFMGSALAKISDS--KQLIASDDGLFLRDTATGVLT- 122 (326)
T ss_dssp EEEEEETT-TTEEEEEEGGGTEEEEEETTTTEEEEEE----C-SSCEEEEEEEETT--EEEEEETTEEEEEETTTCCEE-
T ss_pred cCCeEeCC-CCEEEEEECCCCEEEEEECCCCcEEEEE----C-CCcceEEEEeCCC--eEEEEECCCEEEEECCCCcEE-
Confidence 45667664 4677888888889999988765443322 2 3467778898875 466777888999998654432
Q ss_pred cEEEEcCCC----CeeEEEEEEecCCcEEEEEEe-----cCCceEEEEecccCCCccccceeeeecccccccCCeEEEEe
Q 047869 1947 LHYFTLPDD----MIVDATLVIASRGKMFLIVLS-----ECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYF 2017 (2233)
Q Consensus 1947 vyyF~LpsG----kIrDaTfv~~e~G~~~ILVLS-----S~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyY 2017 (2233)
.....+.+ .+.+. ..+++|++++--+. ..|.||.-+ . +. ...+.+.. ...-.+.+
T Consensus 123 -~~~~~~~~~~~~~~~~i--~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~--g~--~~~~~~~~--------~~~~~i~~ 186 (326)
T 2ghs_A 123 -LHAELESDLPGNRSNDG--RMHPSGALWIGTMGRKAETGAGSIYHVA-K--GK--VTKLFADI--------SIPNSICF 186 (326)
T ss_dssp -EEECSSTTCTTEEEEEE--EECTTSCEEEEEEETTCCTTCEEEEEEE-T--TE--EEEEEEEE--------SSEEEEEE
T ss_pred -EEeeCCCCCCCCCCCCE--EECCCCCEEEEeCCCcCCCCceEEEEEe-C--Cc--EEEeeCCC--------cccCCeEE
Confidence 22222222 24443 34577864332221 136777655 2 11 11111111 11224567
Q ss_pred ccccceeeEEe-cCCcEEEEEcC
Q 047869 2018 SSTYKLLFLSF-QDGTTLVGRLS 2039 (2233)
Q Consensus 2018 S~tl~LLF~SY-~~G~Sf~a~Ls 2039 (2233)
|++-+.|+++- .+++.+...++
T Consensus 187 s~dg~~lyv~~~~~~~I~~~d~~ 209 (326)
T 2ghs_A 187 SPDGTTGYFVDTKVNRLMRVPLD 209 (326)
T ss_dssp CTTSCEEEEEETTTCEEEEEEBC
T ss_pred cCCCCEEEEEECCCCEEEEEEcc
Confidence 77777666653 34555555543
No 179
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=56.95 E-value=59 Score=36.00 Aligned_cols=79 Identities=15% Similarity=0.205 Sum_probs=49.9
Q ss_pred EEEEeecccCccceEEeeccc-----ceEEEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC------e
Q 047869 1865 EIVHLAFNSIVENYLTVAGYE-----DCQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK------F 1933 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGLk-----DC~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~------F 1933 (2233)
.+.+++++|.++++||.+.-. ...|..++..|....++. ....+..+....|-|..+. ||.++.+ .
T Consensus 189 ~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~--~~~~~~~~~~~~~spdg~~-l~~~~~~~~~~~~~ 265 (388)
T 3pe7_A 189 WLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVK--THAEGESCTHEFWVPDGSA-LVYVSYLKGSPDRF 265 (388)
T ss_dssp CEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESC--CCCTTEEEEEEEECTTSSC-EEEEEEETTCCCEE
T ss_pred cccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEee--eCCCCcccccceECCCCCE-EEEEecCCCCCcce
Confidence 356888999778888887643 456666665554332221 1112356778899998875 5554442 3
Q ss_pred EEEEeCcCCCCCC
Q 047869 1934 VKIYDLSQDNISP 1946 (2233)
Q Consensus 1934 VKIYDLS~D~lSP 1946 (2233)
|.+||+......+
T Consensus 266 l~~~d~~~g~~~~ 278 (388)
T 3pe7_A 266 IYSADPETLENRQ 278 (388)
T ss_dssp EEEECTTTCCEEE
T ss_pred EEEEecCCCceEE
Confidence 8999997665433
No 180
>2did_A Tripartite motif protein 39; ZF-B-box domian, Zn binding, one sequence two fold, NPPSFA; NMR {Homo sapiens} SCOP: g.43.1.1 PDB: 2dif_A
Probab=56.89 E-value=6.1 Score=34.70 Aligned_cols=31 Identities=35% Similarity=0.607 Sum_probs=25.9
Q ss_pred cceEeeccCCCCCCceeehhhhh-hhcCCCcEEEEe
Q 047869 1603 QHWYFCYTCDLTVSKGCCSVCAK-VCHRGHRVVYSR 1637 (2233)
Q Consensus 1603 Q~~Y~C~TC~l~~~~GVC~aCA~-vCHkGHdVvyl~ 1637 (2233)
.--|.|.+|.. .||..|.. .-|+||+++.+.
T Consensus 17 ~l~lfC~~d~~----~iC~~C~~~~~H~~H~~~~l~ 48 (53)
T 2did_A 17 ALSLFCYEDQE----AVCLICAISHTHRAHTVVPLS 48 (53)
T ss_dssp BCCEEESSSCS----EECHHHHTSSTTTTSCEEECC
T ss_pred eeeEEeCCCCe----EEeccccCCCCCCCCcEeeHH
Confidence 34678988776 89999998 899999998763
No 181
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=55.07 E-value=2.6e+02 Score=31.15 Aligned_cols=119 Identities=16% Similarity=0.166 Sum_probs=67.3
Q ss_pred cceecccCceEEEee--CCeEEEEechhh---hcccccCCccccccccccccccccce-EEEEeecccCccceEEeeccc
Q 047869 1812 SLLSVSSRGRLAVGE--GDKVAIFDVGQL---IGQATIQPVTADKTNVKPLSRNIVRF-EIVHLAFNSIVENYLTVAGYE 1885 (2233)
Q Consensus 1812 qLLSas~rGrLAVaE--gdKVTILqlsaL---LkQad~s~~skdKlTLtrLSsa~VpF-eVlsLafNP~nEdyLAVcGLk 1885 (2233)
.-++.+..|+++|.. .++|.+++...- +..-... ..-+...-.| ...+|+++|.+++.++.-++.
T Consensus 94 ~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~---------~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~ 164 (329)
T 3fvz_A 94 HGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRS---------MQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYC 164 (329)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBT---------TBCCCSTTCCSSEEEEEECTTTCCEEEEECSS
T ss_pred eEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEeccc---------CCCCCCccccCCCcEEEEeCCCCeEEEEeCCC
Confidence 346777888888874 467877775311 1100000 0000000011 346899999766666555567
Q ss_pred ceEEEEecCCCceeeeeeeeecc----C--CceEEEeEEecCCCceEEEEe--cCeEEEEeCc
Q 047869 1886 DCQVLTLNPRGEVTDRLAIELAL----Q--GAYIRRVDWVPGSPVQLMVVT--NKFVKIYDLS 1940 (2233)
Q Consensus 1886 DC~VLTfss~GeV~DRL~LeL~L----e--g~fIIKa~WLPGSQt~LAVVT--~~FVKIYDLS 1940 (2233)
+..|..++++|.+...+.-...- . -.+...+.+-|.. ..|.|+- +..|++||+.
T Consensus 165 ~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~-g~l~v~d~~~~~I~~~~~~ 226 (329)
T 3fvz_A 165 NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHL-DQLCVADRENGRIQCFKTD 226 (329)
T ss_dssp CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTT-TEEEEEETTTTEEEEEETT
T ss_pred CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCC-CEEEEEECCCCEEEEEECC
Confidence 88899999999887665432211 1 1235556666652 2344443 5589999987
No 182
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=54.81 E-value=4.8e+02 Score=34.17 Aligned_cols=142 Identities=9% Similarity=0.043 Sum_probs=84.0
Q ss_pred EEEEeecccCccceEEeecccceEEE-EecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-eEEEEeCcCC
Q 047869 1865 EIVHLAFNSIVENYLTVAGYEDCQVL-TLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-FVKIYDLSQD 1942 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGLkDC~VL-Tfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-FVKIYDLS~D 1942 (2233)
.+.+++|+ +++.|++++- +-++. .++..+.-..++ .-.+..+..+.|-|..+. ||.+..+ .|++||+...
T Consensus 339 ~~~~~~~s--dg~~l~~~s~-~~~l~~~~d~~~~~~~~l----~~~~~~~~~~~~SpDG~~-la~~~~~~~v~~~d~~tg 410 (1045)
T 1k32_A 339 RYVRRGGD--TKVAFIHGTR-EGDFLGIYDYRTGKAEKF----EENLGNVFAMGVDRNGKF-AVVANDRFEIMTVDLETG 410 (1045)
T ss_dssp EEEEECSS--SEEEEEEEET-TEEEEEEEETTTCCEEEC----CCCCCSEEEEEECTTSSE-EEEEETTSEEEEEETTTC
T ss_pred eEEeeeEc--CCCeEEEEEC-CCceEEEEECCCCCceEe----cCCccceeeeEECCCCCE-EEEECCCCeEEEEECCCC
Confidence 57788998 7888888776 66777 666554322222 222456889999998765 5655555 8999999755
Q ss_pred CCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecC---------CceEEEEecccCCCccccceeeeecccccccCCeE
Q 047869 1943 NISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSEC---------GSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGL 2013 (2233)
Q Consensus 1943 ~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~---------G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GV 2013 (2233)
.. .....-..+.|.+.+| .++|+.++...... +.||.-++.. + ....++. . ...-.
T Consensus 411 ~~--~~~~~~~~~~v~~~~~--SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~-g--~~~~l~~------~--~~~~~ 475 (1045)
T 1k32_A 411 KP--TVIERSREAMITDFTI--SDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG-R--KIFAATT------E--NSHDY 475 (1045)
T ss_dssp CE--EEEEECSSSCCCCEEE--CTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT-T--EEEECSC------S--SSBEE
T ss_pred ce--EEeccCCCCCccceEE--CCCCCeEEEEecCccccccCCCCCeEEEEECCC-C--cEEEeeC------C--CcccC
Confidence 42 2222234556666653 57887554443322 4777766642 1 0111111 1 22245
Q ss_pred EEEeccccceeeEEec
Q 047869 2014 SLYFSSTYKLLFLSFQ 2029 (2233)
Q Consensus 2014 SVyYS~tl~LLF~SY~ 2029 (2233)
++.||++-+.|++.-.
T Consensus 476 ~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 476 APAFDADSKNLYYLSY 491 (1045)
T ss_dssp EEEECTTSCEEEEEES
T ss_pred CceEcCCCCEEEEEec
Confidence 5778888876655443
No 183
>2csv_A Tripartite motif protein 29; ZF-B_BOX domain, TRIM29, ataxia-telangiectasia group D-associated protein, ATDC, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.43.1.1
Probab=54.74 E-value=6.1 Score=36.73 Aligned_cols=29 Identities=28% Similarity=0.424 Sum_probs=25.3
Q ss_pred ceEeeccCCCCCCceeehhhhhhhcCCCcEEEE
Q 047869 1604 HWYFCYTCDLTVSKGCCSVCAKVCHRGHRVVYS 1636 (2233)
Q Consensus 1604 ~~Y~C~TC~l~~~~GVC~aCA~vCHkGHdVvyl 1636 (2233)
--|.|.+|.. .||..|...-|+||+++.+
T Consensus 28 l~lfC~~d~~----~iC~~C~~~~H~~H~~~~l 56 (72)
T 2csv_A 28 MELFCQTDQT----CICYLCMFQEHKNHSTVTV 56 (72)
T ss_dssp CCEEESSSCC----EECHHHHHTTTSSSCEEEH
T ss_pred eEEEeCCCCe----EEccccCCCCCCCCCEecH
Confidence 3578999886 8999999999999999875
No 184
>2d8u_A Ubiquitin ligase TRIM63; tripartite motif-containing 63, muscle-specific ring finger protein 1, MURF1, ring finger protein 28; NMR {Homo sapiens} SCOP: g.43.1.1
Probab=54.33 E-value=3.5 Score=37.19 Aligned_cols=28 Identities=29% Similarity=0.702 Sum_probs=23.9
Q ss_pred eEeeccCCCCCCceeehhhhhh-hcCCCcEEEE
Q 047869 1605 WYFCYTCDLTVSKGCCSVCAKV-CHRGHRVVYS 1636 (2233)
Q Consensus 1605 ~Y~C~TC~l~~~~GVC~aCA~v-CHkGHdVvyl 1636 (2233)
-|.|.||.. .||..|... -|+||+++.+
T Consensus 20 ~lfC~~d~~----~iC~~C~~~~~H~~H~~~~l 48 (64)
T 2d8u_A 20 NIYCLTCEV----PTCSMCKVFGIHKACEVAPL 48 (64)
T ss_dssp CSEESSSCC----CCCSHHHHSSSTTSSCEECT
T ss_pred ceEcCcCCc----eeCccccCCCcCCCCCeeCH
Confidence 578999886 799999975 9999999854
No 185
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=52.69 E-value=98 Score=38.55 Aligned_cols=116 Identities=11% Similarity=0.141 Sum_probs=72.2
Q ss_pred ecCCCceEEEEecCeEEEEeCcCCCCCC----------cEEEEc------CCCCeeEEEEEEecCCc--EEEEEEecCCc
Q 047869 1919 VPGSPVQLMVVTNKFVKIYDLSQDNISP----------LHYFTL------PDDMIVDATLVIASRGK--MFLIVLSECGS 1980 (2233)
Q Consensus 1919 LPGSQt~LAVVT~~FVKIYDLS~D~lSP----------vyyF~L------psGkIrDaTfv~~e~G~--~~ILVLSS~G~ 1980 (2233)
+..+...|||++..-|.|-.|-...-.+ ..+|.+ |+..|+-+- | .+.|. -+++|+++++.
T Consensus 73 lSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVl-W-HPl~~~ds~LVVLtsD~~ 150 (452)
T 3pbp_A 73 SSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVL-F-HPKSYRDSCIVVLKEDDT 150 (452)
T ss_dssp ECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEE-E-CTTBGGGCEEEEEETTSC
T ss_pred ECCCCCEEEEecCCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEE-e-ccccCCCCeEEEEecCCE
Confidence 3344556778888888877776322111 124555 345566655 4 34343 49999999999
Q ss_pred eEEEEecccCCCccccceeeeeccccccc-----CCeEEEEeccccceeeEEe--cCCcEEEE-EcCCC
Q 047869 1981 LYRLELSVEGNVGATPLKEIIQFNDREIH-----AKGLSLYFSSTYKLLFLSF--QDGTTLVG-RLSPN 2041 (2233)
Q Consensus 1981 LY~Qels~s~d~g~~~ltEvvq~~~~q~~-----~~GVSVyYS~tl~LLF~SY--~~G~Sf~a-~Ls~~ 2041 (2233)
|..-++.++.+... +++...+..+ ..-.|+-|+..-=.|++.. ++|..|+- |+-+.
T Consensus 151 Ir~yDl~~s~~~P~-----~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAlcP~LP~ 214 (452)
T 3pbp_A 151 ITMFDILNSQEKPI-----VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAFYPFLPS 214 (452)
T ss_dssp EEEEETTCTTSCCE-----EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEESSCCCS
T ss_pred EEEEEcccCCCCCc-----chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEECCCCcc
Confidence 99999997433222 2222222111 4567889998877899966 88999986 34333
No 186
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=52.09 E-value=2.7e+02 Score=30.51 Aligned_cols=186 Identities=15% Similarity=0.220 Sum_probs=93.0
Q ss_pred eecccCceEEEeeCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEee-c---------
Q 047869 1814 LSVSSRGRLAVGEGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVA-G--------- 1883 (2233)
Q Consensus 1814 LSas~rGrLAVaEgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVc-G--------- 1883 (2233)
+..+..|++.|+.++.|.+++...- + . ..+.......-.-.+-.+++.| ++++.+.. +
T Consensus 59 i~~~~dG~l~v~~~~~l~~~d~~~g--~-------~--~~~~~~~~~~~~~~~~di~~d~-dG~l~~~~~~~~~~~~~~~ 126 (297)
T 3g4e_A 59 VALRQSGGYVATIGTKFCALNWKEQ--S-------A--VVLATVDNDKKNNRFNDGKVDP-AGRYFAGTMAEETAPAVLE 126 (297)
T ss_dssp EEEBTTSSEEEEETTEEEEEETTTT--E-------E--EEEEECCTTCSSEEEEEEEECT-TSCEEEEEEECCSBTTBCC
T ss_pred EEECCCCCEEEEECCeEEEEECCCC--c-------E--EEEEecCCCCCCCCCCCEEECC-CCCEEEecCCccccccccc
Confidence 4556777788888888888876310 0 0 0011110000112245678877 45555432 2
Q ss_pred ccceEEEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEe-cCeEEEEeCcC-C-CCC-CcEEEEcCC--CCe
Q 047869 1884 YEDCQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVT-NKFVKIYDLSQ-D-NIS-PLHYFTLPD--DMI 1957 (2233)
Q Consensus 1884 LkDC~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT-~~FVKIYDLS~-D-~lS-PvyyF~Lps--GkI 1957 (2233)
...-.|++++++|.+.... -....-.-+.|-|..+...+.-| +..|.+||+.. + .++ +...+.++. +..
T Consensus 127 ~~~~~l~~~d~~g~~~~~~-----~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p 201 (297)
T 3g4e_A 127 RHQGALYSLFPDHHVKKYF-----DQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIP 201 (297)
T ss_dssp TTCEEEEEECTTSCEEEEE-----EEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEE
T ss_pred CCCcEEEEEECCCCEEEEe-----eccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCC
Confidence 2346899999888654311 11234456789888766444444 45799999842 2 222 222333332 222
Q ss_pred eEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEec-cccceeeEEec
Q 047869 1958 VDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFS-STYKLLFLSFQ 2029 (2233)
Q Consensus 1958 rDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS-~tl~LLF~SY~ 2029 (2233)
..++ .+.+|++ .+.....|.|+.-+.. .+ .+...+..|.. .-.++.++ ++.+.||++-.
T Consensus 202 ~g~~--~d~~G~l-wva~~~~~~v~~~d~~----tG--~~~~~i~~p~~----~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 202 DGMC--IDAEGKL-WVACYNGGRVIRLDPV----TG--KRLQTVKLPVD----KTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEE--EBTTSCE-EEEEETTTEEEEECTT----TC--CEEEEEECSSS----BEEEEEEESGGGCEEEEEEB
T ss_pred CeeE--ECCCCCE-EEEEcCCCEEEEEcCC----Cc--eEEEEEECCCC----CceEEEEeCCCCCEEEEEcC
Confidence 2222 2455532 2222233444432221 11 12333444432 23457777 78888888765
No 187
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=52.03 E-value=3.9e+02 Score=33.58 Aligned_cols=175 Identities=14% Similarity=0.102 Sum_probs=0.0
Q ss_pred eEEEEeecccCccceEEee----cccceEEEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecCe------
Q 047869 1864 FEIVHLAFNSIVENYLTVA----GYEDCQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNKF------ 1933 (2233)
Q Consensus 1864 FeVlsLafNP~nEdyLAVc----GLkDC~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~F------ 1933 (2233)
+.+-+++++| ++++||.. |-+..+|..++-.|.-. +....++..+..+.|-|+ +..+......-
T Consensus 163 ~~~~~~~~SP-DG~~la~~~~~~G~e~~~i~v~dl~tg~~----~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~ 236 (741)
T 1yr2_A 163 TALDAWAASD-DGRLLAYSVQDGGSDWRTVKFVGVADGKP----LADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAF 236 (741)
T ss_dssp EEEEEEEECT-TSSEEEEEEEETTCSEEEEEEEETTTCCE----EEEEEEEEESCCCEESTT-SEEEEEECCCC------
T ss_pred EEEEeEEECC-CCCEEEEEEcCCCCceEEEEEEECCCCCC----CCccCCCceeccEEEECC-CEEEEEEecCccccccc
Q ss_pred --------EEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEe----cCCceEEEEecccCCCc-cccceee
Q 047869 1934 --------VKIYDLSQDNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLS----ECGSLYRLELSVEGNVG-ATPLKEI 2000 (2233)
Q Consensus 1934 --------VKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLS----S~G~LY~Qels~s~d~g-~~~ltEv 2000 (2233)
|.++++..+....+..|..+.+.-....+...++|+.+++..+ ....||.-++. .++.. ...++.
T Consensus 237 ~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~-~~~~~~~~~l~~- 314 (741)
T 1yr2_A 237 QALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVT-NGKIGPVTALIP- 314 (741)
T ss_dssp --CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEE-TTEECCCEEEEC-
T ss_pred ccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECC-CCCCcccEEecC-
Q ss_pred eecccccccCCeEEEEeccccceeeEEec----CCcEEEEEcCCCcccccceeEEEEccCC
Q 047869 2001 IQFNDREIHAKGLSLYFSSTYKLLFLSFQ----DGTTLVGRLSPNAASLSEVSYVFEEQDG 2057 (2233)
Q Consensus 2001 vq~~~~q~~~~GVSVyYS~tl~LLF~SY~----~G~Sf~a~Ls~~~~sv~eis~Vfe~~~g 2057 (2233)
..+++.-..++.-+.|++..+ +++-+...++... .+...+++..+.
T Consensus 315 --------~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~---~~~~~l~~~~~~ 364 (741)
T 1yr2_A 315 --------DLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGST---PRFDTVVPESKD 364 (741)
T ss_dssp --------SSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSS---CEEEEEECCCSS
T ss_pred --------CCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCc---cccEEEecCCCC
No 188
>2dja_A Midline-2; tripartite motif protein 1, ZF-B_BOX, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.43.1.1 PDB: 2dq5_A
Probab=51.89 E-value=4.2 Score=38.50 Aligned_cols=29 Identities=28% Similarity=0.476 Sum_probs=24.6
Q ss_pred ceEeeccCCCCCCceeehhhhh-hhcCCCcEEEE
Q 047869 1604 HWYFCYTCDLTVSKGCCSVCAK-VCHRGHRVVYS 1636 (2233)
Q Consensus 1604 ~~Y~C~TC~l~~~~GVC~aCA~-vCHkGHdVvyl 1636 (2233)
--|.|.+|.. .||..|.. .-|+||+++.+
T Consensus 29 l~lfC~~d~~----~iC~~C~~~~~H~~H~~~~l 58 (84)
T 2dja_A 29 VNMYCVSDDQ----LICALCKLVGRHRDHQVASL 58 (84)
T ss_dssp CCEEETTTTE----EECHHHHHTSTTTTCCBCCC
T ss_pred ccEEcCCCCc----eEcccCcCCCCCCCCCccCH
Confidence 3578999876 89999998 89999998754
No 189
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=50.29 E-value=4.1e+02 Score=32.13 Aligned_cols=156 Identities=13% Similarity=0.133 Sum_probs=85.7
Q ss_pred ccce-EEeecccceEEEEecCC--C-ceeeeeeeeecc-CCceEEEeEEecCCCceEEEEecC-----------eEEEEe
Q 047869 1875 VENY-LTVAGYEDCQVLTLNPR--G-EVTDRLAIELAL-QGAYIRRVDWVPGSPVQLMVVTNK-----------FVKIYD 1938 (2233)
Q Consensus 1875 nEdy-LAVcGLkDC~VLTfss~--G-eV~DRL~LeL~L-eg~fIIKa~WLPGSQt~LAVVT~~-----------FVKIYD 1938 (2233)
++++ ||....++..|..++.. | .-..++.-.+.. .+..+..+.|-|+.+. ||.++.+ .|.+||
T Consensus 89 Dg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~-l~~~~~~~~~~~~~~~~~~i~~~~ 167 (662)
T 3azo_A 89 AGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGE-VWCMAEEFTGEGPSDVRRFLAAVP 167 (662)
T ss_dssp SSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTE-EEEEEEEECSSSTTCEEEEEEEEE
T ss_pred CCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCE-EEEEEecccCCCCCCceeEEEEEE
Confidence 6777 88888878888888876 3 322233211111 2456788999999876 6655543 688888
Q ss_pred CcCCC----CCCcEEEEcC-CCCeeEEEEEEecCCcEEEEEEecC-------CceEEEEecccCCCccccceeeeecccc
Q 047869 1939 LSQDN----ISPLHYFTLP-DDMIVDATLVIASRGKMFLIVLSEC-------GSLYRLELSVEGNVGATPLKEIIQFNDR 2006 (2233)
Q Consensus 1939 LS~D~----lSPvyyF~Lp-sGkIrDaTfv~~e~G~~~ILVLSS~-------G~LY~Qels~s~d~g~~~ltEvvq~~~~ 2006 (2233)
+.... -.+ -.+. .+.-....+.+.++|+.+.++.... ..||.-++...+. +.+..++...
T Consensus 168 ~~~~~~~~~~~~---~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~-----~~~~~~l~~~ 239 (662)
T 3azo_A 168 LDGSAAADRSAV---RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGR-----FADTRTLLGG 239 (662)
T ss_dssp TTSTTTTCGGGS---EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSC-----EEEEEEEEEE
T ss_pred CCCCccccCCce---eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCc-----ccccEEeCCC
Confidence 87610 111 1233 3221122233467887655554333 4688777752221 1111111111
Q ss_pred cccCCeEEEEeccccceeeEEecCCcEEEEEcCC
Q 047869 2007 EIHAKGLSLYFSSTYKLLFLSFQDGTTLVGRLSP 2040 (2233)
Q Consensus 2007 q~~~~GVSVyYS~tl~LLF~SY~~G~Sf~a~Ls~ 2040 (2233)
....-.++.+|++-+++|.+-.+|+.-+-.++.
T Consensus 240 -~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~ 272 (662)
T 3azo_A 240 -PEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDP 272 (662)
T ss_dssp -TTBCEEEEEECTTSCEEEEECTTSSCEEEEECT
T ss_pred -CCceEcceEECCCCeEEEEECCCCCeEEEEEEC
Confidence 012345678899888887777777444444443
No 190
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=49.41 E-value=2e+02 Score=32.70 Aligned_cols=154 Identities=12% Similarity=0.223 Sum_probs=79.6
Q ss_pred eecccCceEEEe-eCC-eEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecccceEEEE
Q 047869 1814 LSVSSRGRLAVG-EGD-KVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYEDCQVLT 1891 (2233)
Q Consensus 1814 LSas~rGrLAVa-Egd-KVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLkDC~VLT 1891 (2233)
|+....|+++|. |++ .+.++++..--. ....++.++ ++...+-.+...+|+++|..+.+.+++.-..-.|+.
T Consensus 75 Ia~~~~g~~~vs~E~~~~l~~~~v~~~~~-----i~~~~~~~~-~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~ 148 (255)
T 3qqz_A 75 IEYIGDNQFVISDERDYAIYVISLTPNSE-----VKILKKIKI-PLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYK 148 (255)
T ss_dssp EEECSTTEEEEEETTTTEEEEEEECTTCC-----EEEEEEEEC-CCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEE
T ss_pred eEEeCCCEEEEEECCCCcEEEEEcCCCCe-----eeeeeeecc-ccccccccCCcceEEEeCCCCEEEEEECcCCceEEE
Confidence 455567778775 444 777777643110 001122222 233345566678999999988888888777668888
Q ss_pred ecC--CC---ceeeeeeeeeccC-CceEEEeEEecCCCceEEEEecC--eEEEEeCcCCCCCCcEEEEcCCCC-------
Q 047869 1892 LNP--RG---EVTDRLAIELALQ-GAYIRRVDWVPGSPVQLMVVTNK--FVKIYDLSQDNISPLHYFTLPDDM------- 1956 (2233)
Q Consensus 1892 fss--~G---eV~DRL~LeL~Le-g~fIIKa~WLPGSQt~LAVVT~~--FVKIYDLS~D~lSPvyyF~LpsGk------- 1956 (2233)
++. ++ .+.+...+.-.+. .. +=-+.--|.+. .|-|+..+ -+=+||+.-. |+..+.|+.|.
T Consensus 149 ~~g~~~~~~l~i~~~~~~~~~~~~~d-~S~l~~dp~tg-~lliLS~~s~~L~~~d~~g~---~~~~~~L~~g~~~l~~~~ 223 (255)
T 3qqz_A 149 VNGLLSSNELHISKDKALQRQFTLDD-VSGAEFNQQKN-TLLVLSHESRALQEVTLVGE---VIGEMSLTKGSRGLSHNI 223 (255)
T ss_dssp EESTTCSSCCEEEECHHHHHTCCSSC-CCEEEEETTTT-EEEEEETTTTEEEEECTTCC---EEEEEECSTTGGGCSSCC
T ss_pred EcccccCCceeeecchhhccccccCC-ceeEEEcCCCC-eEEEEECCCCeEEEEcCCCC---EEEEEEcCCccCCccccc
Confidence 871 11 1211111100010 01 11122235543 45555554 4555565433 78888888762
Q ss_pred --eeEEEEEEecCCcEEEEEEecCCceE
Q 047869 1957 --IVDATLVIASRGKMFLIVLSECGSLY 1982 (2233)
Q Consensus 1957 --IrDaTfv~~e~G~~~ILVLSS~G~LY 1982 (2233)
=.-.| ++++|+ ++|.|+.-.+|
T Consensus 224 ~qpEGia--~d~~G~--lyIvsE~n~~y 247 (255)
T 3qqz_A 224 KQAEGVA--MDASGN--IYIVSEPNRFY 247 (255)
T ss_dssp CSEEEEE--ECTTCC--EEEEETTTEEE
T ss_pred CCCCeeE--ECCCCC--EEEEcCCceEE
Confidence 23344 356775 34445554444
No 191
>2yrg_A Tripartite motif-containing protein 5; B-box domain, ring finger protein 88, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=48.06 E-value=10 Score=34.39 Aligned_cols=30 Identities=27% Similarity=0.516 Sum_probs=25.0
Q ss_pred ceEeeccCCCCCCceeehhhhh-hhcCCCcEEEEe
Q 047869 1604 HWYFCYTCDLTVSKGCCSVCAK-VCHRGHRVVYSR 1637 (2233)
Q Consensus 1604 ~~Y~C~TC~l~~~~GVC~aCA~-vCHkGHdVvyl~ 1637 (2233)
--|.|.+|.. .||..|.. .-|+||+++.+.
T Consensus 24 L~lfC~~d~~----~iC~~C~~s~eH~~H~~~~l~ 54 (59)
T 2yrg_A 24 LLLFCQEDGK----VICWLCERSQEHRGHHTFPTS 54 (59)
T ss_dssp CCEEETTTCS----EECHHHHTSTTTTTCCEEECC
T ss_pred eeeecCCCCc----EEecccCCCCcCCCCcEeeHH
Confidence 3578988765 89999998 899999998763
No 192
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=46.40 E-value=4e+02 Score=32.03 Aligned_cols=112 Identities=12% Similarity=0.227 Sum_probs=66.1
Q ss_pred eecccCceEEEeeCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecccceEEEEec
Q 047869 1814 LSVSSRGRLAVGEGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYEDCQVLTLN 1893 (2233)
Q Consensus 1814 LSas~rGrLAVaEgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLkDC~VLTfs 1893 (2233)
++. .+..|+|++++.|.++++.++...... +... .+ |.++.++|.+ ++++..-....|+-+.
T Consensus 93 l~f-d~~~L~v~~~~~l~v~dv~sl~~~~~~----------~~~~-~~----v~~i~~~~p~--~av~~~dG~L~v~dl~ 154 (388)
T 1xip_A 93 VCF-HGDQVLVSTRNALYSLDLEELSEFRTV----------TSFE-KP----VFQLKNVNNT--LVILNSVNDLSALDLR 154 (388)
T ss_dssp EEE-ETTEEEEEESSEEEEEESSSTTCEEEE----------EECS-SC----EEEEEECSSE--EEEEETTSEEEEEETT
T ss_pred EEE-CCCEEEEEcCCcEEEEEchhhhccCcc----------ceee-cc----eeeEEecCCC--EEEEECCCCEEEEEcc
Confidence 344 677899999999999999998833221 1111 11 3355555443 4433344444444443
Q ss_pred CCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecCeEEEEeCcCCCCCCcEEEEcCC
Q 047869 1894 PRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNKFVKIYDLSQDNISPLHYFTLPD 1954 (2233)
Q Consensus 1894 s~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~FVKIYDLS~D~lSPvyyF~Lps 1954 (2233)
.. .. .+ + ..-|..+.|=|.- ..+...+..|+||+..-..+++...+..|+
T Consensus 155 ~~-~~-~~----~---~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp 204 (388)
T 1xip_A 155 TK-ST-KQ----L---AQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPS 204 (388)
T ss_dssp TC-CE-EE----E---EESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCH
T ss_pred CC-cc-cc----c---cCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCc
Confidence 22 22 22 1 2368899999997 233444458999988766666666665553
No 193
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=46.05 E-value=2.1e+02 Score=31.83 Aligned_cols=111 Identities=14% Similarity=0.156 Sum_probs=62.3
Q ss_pred eEEEEeecccCccceEEeecccceEEEEecCCCceeeeeeeeeccCC--ceEEEeEEecCCCceEEEEecCeEEEEeCcC
Q 047869 1864 FEIVHLAFNSIVENYLTVAGYEDCQVLTLNPRGEVTDRLAIELALQG--AYIRRVDWVPGSPVQLMVVTNKFVKIYDLSQ 1941 (2233)
Q Consensus 1864 FeVlsLafNP~nEdyLAVcGLkDC~VLTfss~GeV~DRL~LeL~Leg--~fIIKa~WLPGSQt~LAVVT~~FVKIYDLS~ 1941 (2233)
.++.+..+.| +++++++.+-....|+.|+++|++.-+..+.....+ ...+.+...|.-+..++...+..|.+||..
T Consensus 77 ~~~~~~~~~~-dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~- 154 (276)
T 3no2_A 77 CEMQTARILP-DGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN- 154 (276)
T ss_dssp CEEEEEEECT-TSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-
T ss_pred ccccccEECC-CCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-
Confidence 3556677766 677777655447788999999999888766433222 123334455554432222224588888876
Q ss_pred CCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceE
Q 047869 1942 DNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLY 1982 (2233)
Q Consensus 1942 D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY 1982 (2233)
-. .+..|..+ +....+.+ ..+|+ .+++.+..|+||
T Consensus 155 G~--~~w~~~~~-~~~~~~~~--~~~g~-~~v~~~~~~~v~ 189 (276)
T 3no2_A 155 GQ--LLNSVKLS-GTPFSSAF--LDNGD-CLVACGDAHCFV 189 (276)
T ss_dssp SC--EEEEEECS-SCCCEEEE--CTTSC-EEEECBTTSEEE
T ss_pred CC--EEEEEECC-CCccceeE--cCCCC-EEEEeCCCCeEE
Confidence 33 45666665 34444433 34554 333344444554
No 194
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=44.37 E-value=3.5e+02 Score=29.51 Aligned_cols=65 Identities=18% Similarity=0.312 Sum_probs=40.3
Q ss_pred EEEeecccCccceEEeeccc--------------------------ceEEEEecCC-CceeeeeeeeeccCCceEEEeEE
Q 047869 1866 IVHLAFNSIVENYLTVAGYE--------------------------DCQVLTLNPR-GEVTDRLAIELALQGAYIRRVDW 1918 (2233)
Q Consensus 1866 VlsLafNP~nEdyLAVcGLk--------------------------DC~VLTfss~-GeV~DRL~LeL~Leg~fIIKa~W 1918 (2233)
+.+++++| ++++||+...+ ..+|..++.. |+...++.. + .+..+.|
T Consensus 106 ~~~~~wsp-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~----~--~~~~~~~ 178 (347)
T 2gop_A 106 IRSLEWNE-DSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK----P--RFSSGIW 178 (347)
T ss_dssp EEEEEECT-TSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE----E--TTCEEEE
T ss_pred ccceeECC-CCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC----C--CcccccC
Confidence 77899988 67888887643 3566666654 443233332 1 5667889
Q ss_pred ecCCCceEEEEecC---------eEEEEeCc
Q 047869 1919 VPGSPVQLMVVTNK---------FVKIYDLS 1940 (2233)
Q Consensus 1919 LPGSQt~LAVVT~~---------FVKIYDLS 1940 (2233)
-|+. ++++++. ..+||.+.
T Consensus 179 spdg---~~~~~~~~~~~~~~~~~~~l~~~d 206 (347)
T 2gop_A 179 HRDK---IVVNVPHREIIPQYFKFWDIYIWE 206 (347)
T ss_dssp ETTE---EEEEEECCCSSCCSSCCEEEEEEE
T ss_pred CCCe---EEEEEecccccccccccccEEEeC
Confidence 9987 5444421 45676665
No 195
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=43.47 E-value=4.5e+02 Score=30.61 Aligned_cols=152 Identities=12% Similarity=0.056 Sum_probs=82.6
Q ss_pred cCcccccceecccCceEEEee--CC----eEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceE
Q 047869 1806 SGSLVKSLLSVSSRGRLAVGE--GD----KVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYL 1879 (2233)
Q Consensus 1806 sGq~iRqLLSas~rGrLAVaE--gd----KVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyL 1879 (2233)
.|.+. |.+.....++++|.. +. .|++++.... +.++.-++++.= +++++| ++++|
T Consensus 20 ~~p~~-~~~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~----------------~~~~~i~~g~~p-~i~~sp-Dg~~l 80 (373)
T 2mad_H 20 DGPTN-DEAPGADGRRSYINLPAHHSAIIQQWVLDAGSG----------------SILGHVNGGFLP-NPVAAH-SGSEF 80 (373)
T ss_pred CCCCc-cccCCCCCCEEEEeCCcccCCccEEEEEECCCC----------------eEEEEecCCCCC-CeEECC-CCCEE
Confidence 34433 334434456677764 33 7788876311 112333444544 889988 78899
Q ss_pred Eeecc---------cceEEEEecC-CCceeeeeeee--ecc-CCceEEEeEEecCCCceEEEEe---cCeEEEEeCcCCC
Q 047869 1880 TVAGY---------EDCQVLTLNP-RGEVTDRLAIE--LAL-QGAYIRRVDWVPGSPVQLMVVT---NKFVKIYDLSQDN 1943 (2233)
Q Consensus 1880 AVcGL---------kDC~VLTfss-~GeV~DRL~Le--L~L-eg~fIIKa~WLPGSQt~LAVVT---~~FVKIYDLS~D~ 1943 (2233)
.|+.. ++=.|..|+. .++++.++.+- ... .|.+-..+.|-|..+. |.|+. .+.|.|+| ....
T Consensus 81 yv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~-l~v~n~~~~~~v~viD-~t~~ 158 (373)
T 2mad_H 81 ALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNAD-LLFFQFAAGPAVGLVV-QGGS 158 (373)
T ss_pred EEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCE-EEEEecCCCCeEEEEE-CCCC
Confidence 99863 2333444444 56777777653 111 2456667789998765 44432 35799999 6543
Q ss_pred CCCcEE-EEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEe
Q 047869 1944 ISPLHY-FTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLEL 1986 (2233)
Q Consensus 1944 lSPvyy-F~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qel 1986 (2233)
.+.. +-+|.+ ..+ ..+|....+..+.+|.+.+=+.
T Consensus 159 --~~~~~i~~~~~-----~~~-~~~~~~~~~~~~~dg~~~~vd~ 194 (373)
T 2mad_H 159 --SDDQLLSSPTC-----YHI-HPGAPSTFYLLCAQGGLAKTDH 194 (373)
T ss_pred --EEeEEcCCCce-----EEE-EeCCCceEEEEcCCCCEEEEEC
Confidence 3333 333221 112 2334334445566666654443
No 196
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=43.44 E-value=3.6e+02 Score=29.39 Aligned_cols=115 Identities=16% Similarity=0.158 Sum_probs=66.8
Q ss_pred EEEeecccCccceEEeeccc--ceEEEEecCCCceeeeee--eeeccCC-ceEEEeEEecCCCceEEEEe--cCeEEEEe
Q 047869 1866 IVHLAFNSIVENYLTVAGYE--DCQVLTLNPRGEVTDRLA--IELALQG-AYIRRVDWVPGSPVQLMVVT--NKFVKIYD 1938 (2233)
Q Consensus 1866 VlsLafNP~nEdyLAVcGLk--DC~VLTfss~GeV~DRL~--LeL~Leg-~fIIKa~WLPGSQt~LAVVT--~~FVKIYD 1938 (2233)
+.+++++| ++++|.|+... .+.++.+..+|.....+. +.....+ ..+..+.+-|.. .+-|+| +..|.+||
T Consensus 184 ~~~i~~~~-dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G--~l~v~~~~~~~v~~~d 260 (333)
T 2dg1_A 184 ANGIALST-DEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDD--NLYVAMYGQGRVLVFN 260 (333)
T ss_dssp EEEEEECT-TSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTC--CEEEEEETTTEEEEEC
T ss_pred ccceEECC-CCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCC--CEEEEEcCCCEEEEEC
Confidence 45788887 56677777654 455666654665443221 1111222 355566666654 455666 45899999
Q ss_pred CcCCCCCCcEEEEcCCC------CeeEEEEEEecCCcEEEEEEecC------CceEEEEeccc
Q 047869 1939 LSQDNISPLHYFTLPDD------MIVDATLVIASRGKMFLIVLSEC------GSLYRLELSVE 1989 (2233)
Q Consensus 1939 LS~D~lSPvyyF~LpsG------kIrDaTfv~~e~G~~~ILVLSS~------G~LY~Qels~s 1989 (2233)
... .....|.++.+ .+..++| .++|. .++|.+.. |.||.-++...
T Consensus 261 ~~g---~~~~~~~~~~~~~g~~~~~~~~~~--~~dg~-~L~v~~~~g~~~~~~~l~~~~~~~~ 317 (333)
T 2dg1_A 261 KRG---YPIGQILIPGRDEGHMLRSTHPQF--IPGTN-QLIICSNDIEMGGGSMLYTVNGFAK 317 (333)
T ss_dssp TTS---CEEEEEECTTGGGTCSCBCCEEEE--CTTSC-EEEEEEECGGGTCCEEEEEEECSSC
T ss_pred CCC---CEEEEEEcCCCccccccCcceEEE--CCCCC-EEEEEeCccCCCCCceEEEEecccC
Confidence 842 34556667754 4666665 36664 45566665 47887666543
No 197
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=42.26 E-value=3.3e+02 Score=28.65 Aligned_cols=146 Identities=14% Similarity=0.149 Sum_probs=79.2
Q ss_pred ceecccCceEEEee--CCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecccceEEE
Q 047869 1813 LLSVSSRGRLAVGE--GDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYEDCQVL 1890 (2233)
Q Consensus 1813 LLSas~rGrLAVaE--gdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLkDC~VL 1890 (2233)
-+..+..|+++|+. ++.|..++.. ++. .+..+.. ..-.+.+|++.| + ..|.|++...-.|+
T Consensus 66 ~i~~~~~g~l~v~~~~~~~v~~~d~~---g~~-------~~~~~~~-----~~~~~~~i~~~~-~-g~l~v~~~~~~~i~ 128 (300)
T 2qc5_A 66 CLIVSSLGDIWFTENGANKIGKLSKK---GGF-------TEYPLPQ-----PDSGPYGITEGL-N-GDIWFTQLNGDRIG 128 (300)
T ss_dssp EEEECTTSCEEEEETTTTEEEEECTT---SCE-------EEEECSS-----TTCCEEEEEECS-T-TCEEEEETTTTEEE
T ss_pred eEEECCCCCEEEEecCCCeEEEECCC---CCe-------EEecCCC-----CCCCCccceECC-C-CCEEEEccCCCeEE
Confidence 45566778888874 4678777653 111 1111111 112356788876 3 34666666666888
Q ss_pred EecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEe--cCeEEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEecCC
Q 047869 1891 TLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVT--NKFVKIYDLSQDNISPLHYFTLPDDMIVDATLVIASRG 1968 (2233)
Q Consensus 1891 Tfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT--~~FVKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G 1968 (2233)
.++++|++.. .. +...+..+..+..-|..+ |-|++ +..|.+||.. ... ..|.+|.+.-.-..+..+++|
T Consensus 129 ~~~~~g~~~~-~~--~~~~~~~~~~i~~d~~g~--l~v~~~~~~~i~~~~~~-g~~---~~~~~~~~~~~~~~i~~d~~g 199 (300)
T 2qc5_A 129 KLTADGTIYE-YD--LPNKGSYPAFITLGSDNA--LWFTENQNNSIGRITNT-GKL---EEYPLPTNAAAPVGITSGNDG 199 (300)
T ss_dssp EECTTSCEEE-EE--CSSTTCCEEEEEECTTSS--EEEEETTTTEEEEECTT-CCE---EEEECSSTTCCEEEEEECTTS
T ss_pred EECCCCCEEE-cc--CCCCCCCceeEEECCCCC--EEEEecCCCeEEEECCC-CcE---EEeeCCCCCCCcceEEECCCC
Confidence 9998887762 21 222355667777767543 66666 4578899882 221 234454332112223345566
Q ss_pred cEEEEEEe-cCCceEEEEe
Q 047869 1969 KMFLIVLS-ECGSLYRLEL 1986 (2233)
Q Consensus 1969 ~~~ILVLS-S~G~LY~Qel 1986 (2233)
. +.|.+ ..|.|+.-+.
T Consensus 200 ~--l~v~~~~~~~i~~~~~ 216 (300)
T 2qc5_A 200 A--LWFVEIMGNKIGRITT 216 (300)
T ss_dssp S--EEEEETTTTEEEEECT
T ss_pred C--EEEEccCCCEEEEEcC
Confidence 4 23333 3456765443
No 198
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=40.73 E-value=3.6e+02 Score=28.71 Aligned_cols=150 Identities=15% Similarity=0.141 Sum_probs=79.6
Q ss_pred ceecccCceEEEe--eCCeEEEEechhhhcccccCCccccccccccccc-cccceEEEEeecccCccceEEeeccc-ceE
Q 047869 1813 LLSVSSRGRLAVG--EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSR-NIVRFEIVHLAFNSIVENYLTVAGYE-DCQ 1888 (2233)
Q Consensus 1813 LLSas~rGrLAVa--EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSs-a~VpFeVlsLafNP~nEdyLAVcGLk-DC~ 1888 (2233)
-+..+..|+++|. ..++|.+++... .. .. .+..... ..-...+..|++.+.++ .|.|++.. +-.
T Consensus 34 ~v~~~~~g~l~v~~~~~~~i~~~d~~g---~~------~~--~~~~~~~~~~~~~~p~~i~~~~~~g-~l~v~~~~~~~~ 101 (286)
T 1q7f_A 34 GVAVNAQNDIIVADTNNHRIQIFDKEG---RF------KF--QFGECGKRDSQLLYPNRVAVVRNSG-DIIVTERSPTHQ 101 (286)
T ss_dssp EEEECTTCCEEEEEGGGTEEEEECTTS---CE------EE--EECCBSSSTTCBSSEEEEEEETTTT-EEEEEECGGGCE
T ss_pred eEEECCCCCEEEEECCCCEEEEECCCC---cE------EE--EecccCCCcccccCceEEEEEcCCC-eEEEEcCCCCCE
Confidence 4566777888886 567888887531 10 00 0100000 00112356777754444 45566643 677
Q ss_pred EEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEe--cCeEEEEeCcCCCCCCcEEEEcCCC--CeeEEEEEE
Q 047869 1889 VLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVT--NKFVKIYDLSQDNISPLHYFTLPDD--MIVDATLVI 1964 (2233)
Q Consensus 1889 VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT--~~FVKIYDLS~D~lSPvyyF~LpsG--kIrDaTfv~ 1964 (2233)
|..++++|....++.. .....+..+.+-|.. .+.|+. +..|.+||..- .....|..+.+ .+... .+
T Consensus 102 i~~~d~~g~~~~~~~~---~~~~~~~~i~~~~~g--~l~v~~~~~~~i~~~~~~g---~~~~~~~~~~~~~~p~~i--~~ 171 (286)
T 1q7f_A 102 IQIYNQYGQFVRKFGA---TILQHPRGVTVDNKG--RIIVVECKVMRVIIFDQNG---NVLHKFGCSKHLEFPNGV--VV 171 (286)
T ss_dssp EEEECTTSCEEEEECT---TTCSCEEEEEECTTS--CEEEEETTTTEEEEECTTS---CEEEEEECTTTCSSEEEE--EE
T ss_pred EEEECCCCcEEEEecC---ccCCCceEEEEeCCC--CEEEEECCCCEEEEEcCCC---CEEEEeCCCCccCCcEEE--EE
Confidence 8888899987655421 123456677777754 355554 45899999642 23334433222 23333 33
Q ss_pred ecCCcEEEEEEecCCceEEEE
Q 047869 1965 ASRGKMFLIVLSECGSLYRLE 1985 (2233)
Q Consensus 1965 ~e~G~~~ILVLSS~G~LY~Qe 1985 (2233)
+++|+ +.+.-+.++.|+.-+
T Consensus 172 ~~~g~-l~v~~~~~~~i~~~~ 191 (286)
T 1q7f_A 172 NDKQE-IFISDNRAHCVKVFN 191 (286)
T ss_dssp CSSSE-EEEEEGGGTEEEEEE
T ss_pred CCCCC-EEEEECCCCEEEEEc
Confidence 55664 223334466777554
No 199
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=39.71 E-value=2.5e+02 Score=31.45 Aligned_cols=105 Identities=10% Similarity=0.079 Sum_probs=60.6
Q ss_pred cCceEEEe---eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeeccc---------
Q 047869 1818 SRGRLAVG---EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYE--------- 1885 (2233)
Q Consensus 1818 ~rGrLAVa---EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLk--------- 1885 (2233)
..|+|+|+ ..+.|.++++...--. .++ +.+..| .++++.| ++++++++.-.
T Consensus 139 ~~~~lyv~~~~~~~~v~viD~~t~~~~--------~~i---~~g~~p-----~~i~~~~-dG~l~v~~~~~~~~~~~~~~ 201 (328)
T 3dsm_A 139 YGKYVYVNCWSYQNRILKIDTETDKVV--------DEL---TIGIQP-----TSLVMDK-YNKMWTITDGGYEGSPYGYE 201 (328)
T ss_dssp ETTEEEEEECTTCCEEEEEETTTTEEE--------EEE---ECSSCB-----CCCEECT-TSEEEEEBCCBCTTCSSCBC
T ss_pred ECCEEEEEcCCCCCEEEEEECCCCeEE--------EEE---EcCCCc-----cceEEcC-CCCEEEEECCCccCCccccC
Confidence 56888887 2678999987431100 111 112222 3677777 44555444322
Q ss_pred ceEEEEecCC-CceeeeeeeeeccCCceEEEeEEecCCCceEEEEecCeEEEEeCcCCCC
Q 047869 1886 DCQVLTLNPR-GEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNKFVKIYDLSQDNI 1944 (2233)
Q Consensus 1886 DC~VLTfss~-GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~FVKIYDLS~D~l 1944 (2233)
.-.|..++++ |++..++.+. .|.....+.|-|..+. |- +++..|.+||+....+
T Consensus 202 ~~~v~~id~~t~~v~~~~~~~---~g~~p~~la~~~d~~~-ly-v~~~~v~~~d~~t~~~ 256 (328)
T 3dsm_A 202 APSLYRIDAETFTVEKQFKFK---LGDWPSEVQLNGTRDT-LY-WINNDIWRMPVEADRV 256 (328)
T ss_dssp CCEEEEEETTTTEEEEEEECC---TTCCCEEEEECTTSCE-EE-EESSSEEEEETTCSSC
T ss_pred CceEEEEECCCCeEEEEEecC---CCCCceeEEEecCCCE-EE-EEccEEEEEECCCCce
Confidence 2678888765 6776655432 1456677788875433 33 4455889999876664
No 200
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=38.30 E-value=4.7e+02 Score=29.27 Aligned_cols=104 Identities=10% Similarity=0.066 Sum_probs=59.8
Q ss_pred EEeecccCccceEEeeccc--ceEEEEec-CCC-ceeeeeee-eeccCCceEEEeEEecCCCceEEEEe--cCeEEEEeC
Q 047869 1867 VHLAFNSIVENYLTVAGYE--DCQVLTLN-PRG-EVTDRLAI-ELALQGAYIRRVDWVPGSPVQLMVVT--NKFVKIYDL 1939 (2233)
Q Consensus 1867 lsLafNP~nEdyLAVcGLk--DC~VLTfs-s~G-eV~DRL~L-eL~Leg~fIIKa~WLPGSQt~LAVVT--~~FVKIYDL 1939 (2233)
-+++++| ++++|.|++-. .+.++.++ .+| .+.++-.+ ...-.+.....+.+-+.. .|-|+| ...|.+||.
T Consensus 182 ~~i~~s~-dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G--~lwva~~~~~~v~~~d~ 258 (326)
T 2ghs_A 182 NSICFSP-DGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEG--HIWNARWGEGAVDRYDT 258 (326)
T ss_dssp EEEEECT-TSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTS--CEEEEEETTTEEEEECT
T ss_pred CCeEEcC-CCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCC--CEEEEEeCCCEEEEECC
Confidence 3678877 56778777654 45555554 467 65543222 222123344455555443 466666 568999998
Q ss_pred cCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecC
Q 047869 1940 SQDNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSEC 1978 (2233)
Q Consensus 1940 S~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~ 1978 (2233)
.. .....+.+|...+..++|. .++|. .++|.+..
T Consensus 259 ~g---~~~~~i~~~~~~~~~~af~-g~d~~-~L~vt~~~ 292 (326)
T 2ghs_A 259 DG---NHIARYEVPGKQTTCPAFI-GPDAS-RLLVTSAR 292 (326)
T ss_dssp TC---CEEEEEECSCSBEEEEEEE-STTSC-EEEEEEBC
T ss_pred CC---CEEEEEECCCCCcEEEEEe-cCCCC-EEEEEecC
Confidence 32 2456677888778877764 24444 34454443
No 201
>2egm_A Tripartite motif-containing protein 41; ZF-B_BOX domain, tripartite motif protein 41, TRIM41, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.94 E-value=12 Score=33.78 Aligned_cols=29 Identities=31% Similarity=0.548 Sum_probs=23.5
Q ss_pred cceEeeccCCCCCCceeehhhhh-hhcCCCcEEE
Q 047869 1603 QHWYFCYTCDLTVSKGCCSVCAK-VCHRGHRVVY 1635 (2233)
Q Consensus 1603 Q~~Y~C~TC~l~~~~GVC~aCA~-vCHkGHdVvy 1635 (2233)
.--|.|.+|.. .||..|.. .-|+||+++.
T Consensus 27 ~L~lfC~~d~~----~iC~~C~~~~eH~~H~~~~ 56 (57)
T 2egm_A 27 ALKLFCEVDEE----AICVVCRESRSHKQHSVVP 56 (57)
T ss_dssp BCCEEETTTTE----EECHHHHHSHHHHSSCEEC
T ss_pred eeeEEcCCCCc----EEecccCCCCCCCCCcEec
Confidence 34678988765 89999998 8999999863
No 202
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=35.38 E-value=4.7e+02 Score=28.45 Aligned_cols=151 Identities=10% Similarity=0.089 Sum_probs=82.2
Q ss_pred eecccCceEEEe--eCCeEEEEechhhhcccccCCccccccccccccccccceEEEEeecccCccceEEeecccc----e
Q 047869 1814 LSVSSRGRLAVG--EGDKVAIFDVGQLIGQATIQPVTADKTNVKPLSRNIVRFEIVHLAFNSIVENYLTVAGYED----C 1887 (2233)
Q Consensus 1814 LSas~rGrLAVa--EgdKVTILqlsaLLkQad~s~~skdKlTLtrLSsa~VpFeVlsLafNP~nEdyLAVcGLkD----C 1887 (2233)
+..+..|++++. +++.|.+++... . ... .+.. ..+..+.+|++.|. ++ |.|++..+ -
T Consensus 50 ~~~~~~g~l~~~~~~~~~i~~~d~~~-----~----~~~--~~~~----~~~~~~~~i~~~~d-g~-l~v~~~~~~~~~~ 112 (333)
T 2dg1_A 50 LNFDRQGQLFLLDVFEGNIFKINPET-----K----EIK--RPFV----SHKANPAAIKIHKD-GR-LFVCYLGDFKSTG 112 (333)
T ss_dssp EEECTTSCEEEEETTTCEEEEECTTT-----C----CEE--EEEE----CSSSSEEEEEECTT-SC-EEEEECTTSSSCC
T ss_pred cEECCCCCEEEEECCCCEEEEEeCCC-----C----cEE--EEee----CCCCCcceEEECCC-Cc-EEEEeCCCCCCCc
Confidence 445567788763 567788876521 0 001 1110 11235778888874 34 55555554 5
Q ss_pred EEEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC------eEEEEeCcCCCCCCcEEEEcCCCCeeEEE
Q 047869 1888 QVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK------FVKIYDLSQDNISPLHYFTLPDDMIVDAT 1961 (2233)
Q Consensus 1888 ~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~------FVKIYDLS~D~lSPvyyF~LpsGkIrDaT 1961 (2233)
.|..++.+|....++.-. ...+..+..+.|-|.. .+.+++.. ..+||.+..+.-....... ..+.+. .
T Consensus 113 ~i~~~d~~~~~~~~~~~~-~~~~~~~~~i~~d~~g--~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~--~ 186 (333)
T 2dg1_A 113 GIFAATENGDNLQDIIED-LSTAYCIDDMVFDSKG--GFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ-NISVAN--G 186 (333)
T ss_dssp EEEEECTTSCSCEEEECS-SSSCCCEEEEEECTTS--CEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE-EESSEE--E
T ss_pred eEEEEeCCCCEEEEEEcc-CccCCcccceEECCCC--CEEEEeccccccCCCceEEEEeCCCCEEEEeec-CCCccc--c
Confidence 778888777654433111 1236778888998865 46666653 3566666544322221111 111222 2
Q ss_pred EEEecCCcEEEEEEecCCceEEEEec
Q 047869 1962 LVIASRGKMFLIVLSECGSLYRLELS 1987 (2233)
Q Consensus 1962 fv~~e~G~~~ILVLSS~G~LY~Qels 1987 (2233)
+...++|+...+.-+..|.||.-++.
T Consensus 187 i~~~~dg~~l~v~~~~~~~i~~~d~~ 212 (333)
T 2dg1_A 187 IALSTDEKVLWVTETTANRLHRIALE 212 (333)
T ss_dssp EEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred eEECCCCCEEEEEeCCCCeEEEEEec
Confidence 33456776555555667888877765
No 203
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=34.74 E-value=2.6e+02 Score=30.89 Aligned_cols=98 Identities=17% Similarity=0.135 Sum_probs=60.6
Q ss_pred eecccCccceEEeecccc--eEEEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEec-CeEEEEeCcCCCCC
Q 047869 1869 LAFNSIVENYLTVAGYED--CQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTN-KFVKIYDLSQDNIS 1945 (2233)
Q Consensus 1869 LafNP~nEdyLAVcGLkD--C~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~-~FVKIYDLS~D~lS 1945 (2233)
.+|+| ++++||..+-++ -+|..++..+.-.-++. ...+..+....|-|..+. |+.+.. ..|.++|+....
T Consensus 41 ~~~Sp-Dg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt---~~~~~~~~~~~~spdg~~-l~~~~~~~~l~~~d~~~g~-- 113 (388)
T 3pe7_A 41 KCFTR-DGSKLLFGGAFDGPWNYYLLDLNTQVATQLT---EGRGDNTFGGFLSPDDDA-LFYVKDGRNLMRVDLATLE-- 113 (388)
T ss_dssp CCBCT-TSCEEEEEECTTSSCEEEEEETTTCEEEECC---CSSCBCSSSCEECTTSSE-EEEEETTTEEEEEETTTCC--
T ss_pred ccCCC-CCCEEEEEEcCCCCceEEEEeCCCCceEEee---eCCCCCccceEEcCCCCE-EEEEeCCCeEEEEECCCCc--
Confidence 56777 778888887643 25666654433222221 111222334569999876 666654 479999987654
Q ss_pred CcEEEEcCCCCeeEEEEEEecCCcEEEE
Q 047869 1946 PLHYFTLPDDMIVDATLVIASRGKMFLI 1973 (2233)
Q Consensus 1946 PvyyF~LpsGkIrDaTfv~~e~G~~~IL 1973 (2233)
+..-+..|.+.+...++....+|+.++.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~dg~~l~~ 141 (388)
T 3pe7_A 114 ENVVYQVPAEWVGYGTWVANSDCTKLVG 141 (388)
T ss_dssp EEEEEECCTTEEEEEEEEECTTSSEEEE
T ss_pred ceeeeechhhcccccceeECCCCCeecc
Confidence 4445667887777777777778876543
No 204
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=34.58 E-value=5e+02 Score=28.53 Aligned_cols=110 Identities=9% Similarity=0.062 Sum_probs=59.1
Q ss_pred ceEEEEeecccCccceEEeeccc----ceEEEEecCC-CceeeeeeeeeccCCceEEEeEEec-CCCceEEEEe------
Q 047869 1863 RFEIVHLAFNSIVENYLTVAGYE----DCQVLTLNPR-GEVTDRLAIELALQGAYIRRVDWVP-GSPVQLMVVT------ 1930 (2233)
Q Consensus 1863 pFeVlsLafNP~nEdyLAVcGLk----DC~VLTfss~-GeV~DRL~LeL~Leg~fIIKa~WLP-GSQt~LAVVT------ 1930 (2233)
...+.+++|+| ++++||+.+.. +-.|..++.. |++. ++. ..++ +. ..|-| +.+ .++..+
T Consensus 237 ~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~l~~~d~~~g~~~-~l~---~~~~--~~-~~~s~~dg~-~l~~~~~~~p~~ 307 (396)
T 3c5m_A 237 GESCTHEFWIP-DGSAMAYVSYFKGQTDRVIYKANPETLENE-EVM---VMPP--CS-HLMSNFDGS-LMVGDGCDAPVD 307 (396)
T ss_dssp TEEEEEEEECT-TSSCEEEEEEETTTCCEEEEEECTTTCCEE-EEE---ECCS--EE-EEEECSSSS-EEEEEECCC---
T ss_pred CccccceEECC-CCCEEEEEecCCCCccceEEEEECCCCCeE-Eee---eCCC--CC-CCccCCCCc-eEEEecCCccee
Confidence 45677889998 67788877543 3446666543 3332 221 1223 22 88999 766 455433
Q ss_pred -----------cCeEEEEeCcCCCCCCcEEEEcCCCC-----------eeEEEEEEecCCcEEEEEEecCCc--eEEEEe
Q 047869 1931 -----------NKFVKIYDLSQDNISPLHYFTLPDDM-----------IVDATLVIASRGKMFLIVLSECGS--LYRLEL 1986 (2233)
Q Consensus 1931 -----------~~FVKIYDLS~D~lSPvyyF~LpsGk-----------IrDaTfv~~e~G~~~ILVLSS~G~--LY~Qel 1986 (2233)
...|.+||+....... ..-..+. +...+ +.++|+.+++..+..|. ||.-++
T Consensus 308 ~~~~~~~~~~~~~~i~~~d~~~~~~~~---l~~~~~~~~~~~~~~~~~~~~~~--~s~dg~~l~~~s~~~~~~~l~~~~~ 382 (396)
T 3c5m_A 308 VADADSYNIENDPFLYVLNTKAKSAQK---LCKHSTSWDVLDGDRQITHPHPS--FTPNDDGVLFTSDFEGVPAIYIADV 382 (396)
T ss_dssp -------CCCCCCEEEEEETTTTBCCE---EEECCCCCCCBTTBSSTTCCCCE--ECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred eccccccccCCCCcEEEEecccCceEE---ccCCCCccccccccccCCCCCce--EccCCCeEEEEecCCCCceEEEEEE
Confidence 1468888886554322 1212221 22333 35678766655555553 554443
No 205
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=34.28 E-value=4.7e+02 Score=29.76 Aligned_cols=74 Identities=9% Similarity=0.313 Sum_probs=52.5
Q ss_pred eEEEEeecccCccceEEeecccceEEEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEe--cCeEEEEeCcC
Q 047869 1864 FEIVHLAFNSIVENYLTVAGYEDCQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVT--NKFVKIYDLSQ 1941 (2233)
Q Consensus 1864 FeVlsLafNP~nEdyLAVcGLkDC~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT--~~FVKIYDLS~ 1941 (2233)
-++-.|++||. .+.|.++.-++-.|++++.+|.|..++.+....+ .--+.|+++. .++|+. ++.+-+|++..
T Consensus 27 ~~lSGla~~~~-~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g~~D---~EGIa~~~~g--~~~vs~E~~~~l~~~~v~~ 100 (255)
T 3qqz_A 27 NNISSLTWSAQ-SNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKD---LETIEYIGDN--QFVISDERDYAIYVISLTP 100 (255)
T ss_dssp SCEEEEEEETT-TTEEEEEEETTEEEEEEETTCCEEEEEECSSCSS---EEEEEECSTT--EEEEEETTTTEEEEEEECT
T ss_pred cCcceeEEeCC-CCEEEEEECCCCeEEEEeCCCCEEEEEecCCCCC---hHHeEEeCCC--EEEEEECCCCcEEEEEcCC
Confidence 47889999996 5677777778999999999999999987643222 2223466655 455553 44677888877
Q ss_pred CC
Q 047869 1942 DN 1943 (2233)
Q Consensus 1942 D~ 1943 (2233)
+.
T Consensus 101 ~~ 102 (255)
T 3qqz_A 101 NS 102 (255)
T ss_dssp TC
T ss_pred CC
Confidence 65
No 206
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=33.66 E-value=2.7e+02 Score=37.60 Aligned_cols=122 Identities=14% Similarity=0.124 Sum_probs=64.8
Q ss_pred CceEEEeEEecCCCceEE-EEecCeEEEEeCcCCCC----CC-cEEEEcCCCCeeE-E-EEEE-ecCCcEEEEEEecCCc
Q 047869 1910 GAYIRRVDWVPGSPVQLM-VVTNKFVKIYDLSQDNI----SP-LHYFTLPDDMIVD-A-TLVI-ASRGKMFLIVLSECGS 1980 (2233)
Q Consensus 1910 g~fIIKa~WLPGSQt~LA-VVT~~FVKIYDLS~D~l----SP-vyyF~LpsGkIrD-a-Tfv~-~e~G~~~ILVLSS~G~ 1980 (2233)
+.|-||-.==|.+ -|= |+-+.-+.|-++..... .| +..|-.|. .|+- + +|.- .+.+.+.|+|++++|.
T Consensus 63 ~~~~~~~~~~pr~--~~wrv~~~~~l~~~~~~~~~~~~~~~~~ti~~~Fp~-~i~p~~v~~~~~~~~~~L~v~vit~~~~ 139 (1139)
T 4fhn_B 63 GVYTSNKSKGSQT--LRWSIFQNRTLTIFDVSLNSKKEPLSKFNVKIHFPS-NVMKDGVAFSFSEHSDTTIIYAITHARV 139 (1139)
T ss_dssp CSSEEEEECSSSC--EEEEEEETTEEEEECCCCCCSSSSSCCEEEEEECSS-CSCSSSCSCEEEESSSEEEEEEECSSSC
T ss_pred ceEeecCCCCCcc--eEEEEecCCeEEEEEEeccCCCcccCCeEEEEECCC-cccCCceEEeecCCCCeEEEEEEcCCCc
Confidence 5577764444443 443 55666677777664433 22 33444454 4433 2 3322 2468899999999999
Q ss_pred eEEEEecccC--CCccccceeeeeccccc-ccC-CeEEEEeccccceeeEEecCCcEEE
Q 047869 1981 LYRLELSVEG--NVGATPLKEIIQFNDRE-IHA-KGLSLYFSSTYKLLFLSFQDGTTLV 2035 (2233)
Q Consensus 1981 LY~Qels~s~--d~g~~~ltEvvq~~~~q-~~~-~GVSVyYS~tl~LLF~SY~~G~Sf~ 2035 (2233)
+|+-.++... +.....-.+|.+....- .+. ...-+|- -.-+.|+||..||.-.-
T Consensus 140 ly~l~l~~~~f~~~~~~~~~~W~k~~~P~~f~~r~Ph~L~a-vs~~~lvVsL~DGgLLr 197 (1139)
T 4fhn_B 140 LYYIRLSKTWFQLPDARLDDDWCLCYRPISFLNQKPDLMAA-ISTSEICVSFFNGGLTK 197 (1139)
T ss_dssp EEEEEEEHHHHHCCCCCCCSCCBCCBCCSCTTTSCEEEEEE-CCSSEEEEEETTSCEEE
T ss_pred EEEEEeCHHHhcCccCcCCcccceeccCCCccCCCceEEEE-EcCCcEEEEECCCCEEE
Confidence 9998877321 00000113443322211 122 2333333 44667778998887543
No 207
>1fre_A Nuclear factor XNF7; zinc-binding protein, BBOX, development, MID-blastula- transition; NMR {Xenopus laevis} SCOP: g.43.1.1
Probab=33.36 E-value=7.7 Score=32.44 Aligned_cols=27 Identities=19% Similarity=0.475 Sum_probs=21.9
Q ss_pred ceEeeccCCCCCCceeehhhhh-hhcCCCcEE
Q 047869 1604 HWYFCYTCDLTVSKGCCSVCAK-VCHRGHRVV 1634 (2233)
Q Consensus 1604 ~~Y~C~TC~l~~~~GVC~aCA~-vCHkGHdVv 1634 (2233)
--|.|.+|.. .||..|.. .-|+||+++
T Consensus 13 l~lfC~~d~~----~iC~~C~~~~~H~~H~~~ 40 (42)
T 1fre_A 13 LKLYCKDDGT----LSCVICRDSLKHASHNFL 40 (42)
T ss_dssp CCCCCCSSSS----SSCCTTSSCSSCTTCCCC
T ss_pred eeEEeCCCCe----EEeccCCCCCCCCCCcEe
Confidence 3567877665 79999998 799999875
No 208
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=32.25 E-value=7.5e+02 Score=29.90 Aligned_cols=239 Identities=17% Similarity=0.218 Sum_probs=116.8
Q ss_pred EEEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecC-----eEEEEeCcCCCCCCcEEEE---cC--C--C
Q 047869 1888 QVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNK-----FVKIYDLSQDNISPLHYFT---LP--D--D 1955 (2233)
Q Consensus 1888 ~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~-----FVKIYDLS~D~lSPvyyF~---Lp--s--G 1955 (2233)
-+..++-+|.+..++.. ..+++-=++-=.=+.|.++-||++|++ .|.||++.-+.- |..... +| + .
T Consensus 51 gL~Vydl~G~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~-~l~~i~~~~~pv~t~~~ 128 (355)
T 3amr_A 51 GLVVYSLDGKMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG-TLQSMTDPDHPIATAIN 128 (355)
T ss_dssp EEEEEETTSCEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC-CEEECSCTTSCEECCCS
T ss_pred CEEEEcCCCcEEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC-ceeeccccccCcCCCCC
Confidence 34445558888887632 122221122211234556668888875 599997743221 222221 12 2 2
Q ss_pred CeeEEEEEEec-CCcEEEEEEecCCceEEEEecccCCCc-cccceeeeecccccccCCeEEEEeccccceeeEEecCCcE
Q 047869 1956 MIVDATLVIAS-RGKMFLIVLSECGSLYRLELSVEGNVG-ATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSFQDGTT 2033 (2233)
Q Consensus 1956 kIrDaTfv~~e-~G~~~ILVLSS~G~LY~Qels~s~d~g-~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY~~G~S 2033 (2233)
.+--.++.... .|+.+++|..++|++..-++...++.. ...+.-.+.++. |. -.+-+-...+.||++=++--
T Consensus 129 ~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgs-q~----EgcvvDd~~g~Lyv~eEd~G- 202 (355)
T 3amr_A 129 EVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNS-QT----EGMAADDEYGRLYIAEEDEA- 202 (355)
T ss_dssp SCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSS-CE----EEEEEETTTTEEEEEETTTE-
T ss_pred CeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCC-Cc----ceEEEcCCCCeEEEecccce-
Confidence 34445655444 577899999999977766676433221 112222233332 22 23567788899999988743
Q ss_pred EEEEcCCCcccccceeEEEEccCCC--CCCCcccceeeccCCCceEEEEeccCCCceEEEEec-CCceeeecccccc---
Q 047869 2034 LVGRLSPNAASLSEVSYVFEEQDGK--LRSAGLHRWKELLASSGLFFCFSSLKSNAAVAVSLG-TNELIAQNMRHAA--- 2107 (2233)
Q Consensus 2034 f~a~Ls~~~~sv~eis~Vfe~~~gk--~~~a~L~qWsEV~~hPGLf~cls~~~sn~pvvv~l~-pd~I~iQeiK~~~--- 2107 (2233)
+-++......-..-..+-....+. ..+.|+.=+.. ..+-|.+++ |.|..|.-.|+-.. +.+ ++..++...
T Consensus 203 -Iw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~-~~g~gyLiv-SsQG~~s~~Vydr~~~~~-~vg~f~Ig~~~~ 278 (355)
T 3amr_A 203 -IWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYA-ADGKGYLMA-SSQGNSSYAIYDRQGKNK-YVADFRITDGPE 278 (355)
T ss_dssp -EEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEEC-GGGCEEEEE-EEGGGTEEEEEESSTTCC-EEEEEEECCCSS
T ss_pred -EEEEeCCcCCCCCceEEEEecCCccccCcceEEEEec-CCCCEEEEE-EcCCCCEEEEEECCCCCc-EEEEEEecCCCC
Confidence 445542211101111111111111 11223332211 112465555 34455554444444 333 344443221
Q ss_pred -CCCCCeEEEEEee-cCCCCCeEEEEEeeCCce
Q 047869 2108 -GSTSPLVGVTAYK-PLSKDKVHCLVLHDDGSL 2138 (2233)
Q Consensus 2108 -~sSs~vdgva~y~-p~s~~rttlLLLcEDGSL 2138 (2233)
-..+..||+++.. +++..-|.=|+..-||.-
T Consensus 279 idgv~eTDG~~v~~~~lG~~fP~Gl~V~qDg~n 311 (355)
T 3amr_A 279 TDGTSDTDGIDVLGFGLGPEYPFGIFVAQDGEN 311 (355)
T ss_dssp SCCCCSCCCEEEECSCCSTTCTTCEEEEEESSC
T ss_pred ceeeeccCcceEEccccCCCCCCcEEEEecCCc
Confidence 2255678887633 344445666777777754
No 209
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=30.50 E-value=1.2e+03 Score=31.84 Aligned_cols=116 Identities=16% Similarity=0.174 Sum_probs=73.7
Q ss_pred ceEEEEeecccCccceEEeecccceEEEEecCCCceeeeeeeeeccCCceEEEeEEecCC-----CceEEEEe--cCeEE
Q 047869 1863 RFEIVHLAFNSIVENYLTVAGYEDCQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGS-----PVQLMVVT--NKFVK 1935 (2233)
Q Consensus 1863 pFeVlsLafNP~nEdyLAVcGLkDC~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGS-----Qt~LAVVT--~~FVK 1935 (2233)
+.+|..-+. |+++++++--.++.++.++. |+..... +..+++. |.....-|-. ...+||.+ ...|+
T Consensus 513 ~~~I~~As~---n~~~vvva~g~~l~~fel~~-~~L~~~~--~~~l~~e-vscl~i~~~~~~~~~s~~~aVg~~~d~tv~ 585 (1158)
T 3ei3_A 513 AKNISVASC---NSSQVVVAVGRALYYLQIHP-QELRQIS--HTEMEHE-VACLDITPLGDSNGLSPLCAIGLWTDISAR 585 (1158)
T ss_dssp CCCCCEEEE---CSSEEEEEETTEEEEEEEET-TEEEEEE--EEECSSC-EEEEECCCCSSSTTCCSEEEEEETTTTEEE
T ss_pred CCEEEEEEe---CCCEEEEEECCEEEEEEeeC-Cceeeec--ccCCCCc-eEEEEeecCCCCcccccEEEEEECCCCEEE
Confidence 455666665 45677776435777888875 5444322 2333333 4444433311 13466766 34999
Q ss_pred EEeCcCCCCCCcEEEEcCCCCe-eEEEEEEecCCcEEEEEEecCCceEEEEecc
Q 047869 1936 IYDLSQDNISPLHYFTLPDDMI-VDATLVIASRGKMFLIVLSECGSLYRLELSV 1988 (2233)
Q Consensus 1936 IYDLS~D~lSPvyyF~LpsGkI-rDaTfv~~e~G~~~ILVLSS~G~LY~Qels~ 1988 (2233)
||.|. .+.+.+...|+...+ ++..+. .-+|..++++-..+|.+++-.+..
T Consensus 586 I~sL~--~l~~~~~~~L~~~~~p~si~l~-~~~~~~~L~igl~dG~l~~~~~d~ 636 (1158)
T 3ei3_A 586 ILKLP--SFELLHKEMLGGEIIPRSILMT-TFESSHYLLCALGDGALFYFGLNI 636 (1158)
T ss_dssp EEETT--TCCEEEEEECCSSCCEEEEEEE-EETTEEEEEEEETTSEEEEEEECT
T ss_pred EEECC--CCCeEEEEECCCCCCCcEEEEE-EeCCCcEEEEEeCCCeEEEEEEcC
Confidence 99995 589999999975443 554444 345778999999999998888764
No 210
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=30.04 E-value=5.8e+02 Score=27.92 Aligned_cols=122 Identities=17% Similarity=0.247 Sum_probs=62.3
Q ss_pred ceEEEEecC-CCceeeeeeeeeccCCceEEEeEEecCCCceEEEEec-------CeEEEEeCcCCCCCCcEEE-EcCCCC
Q 047869 1886 DCQVLTLNP-RGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTN-------KFVKIYDLSQDNISPLHYF-TLPDDM 1956 (2233)
Q Consensus 1886 DC~VLTfss-~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~-------~FVKIYDLS~D~lSPvyyF-~LpsGk 1956 (2233)
...|+++++ .|++.. +. .+ ....-+.|-|..+. |.|+.. ..|.+||+..+.+.....| ..+.|.
T Consensus 168 ~~~v~~~d~~~g~~~~-~~-~~----~~p~gl~~spdg~~-lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~ 240 (305)
T 3dr2_A 168 HHSVYRLPPDGSPLQR-MA-DL----DHPNGLAFSPDEQT-LYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGL 240 (305)
T ss_dssp CEEEEEECSSSCCCEE-EE-EE----SSEEEEEECTTSSE-EEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSC
T ss_pred CCeEEEEcCCCCcEEE-Ee-cC----CCCcceEEcCCCCE-EEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCC
Confidence 478999998 466543 22 22 33455778888765 444433 5799999876543222222 222222
Q ss_pred eeEEEEEEecCCcEEEEEEecCCceEEEEecccCCCccccceeeeecccccccCCeEEEEeccccceeeEEecCC
Q 047869 1957 IVDATLVIASRGKMFLIVLSECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSFQDG 2031 (2233)
Q Consensus 1957 IrDaTfv~~e~G~~~ILVLSS~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY~~G 2031 (2233)
... +..+.+|+ +.|.+..| |+.- ...+. ....+..+. +-.++.|+++-+.||++..+|
T Consensus 241 pdg--i~~d~~G~--lwv~~~~g-v~~~--~~~g~-----~~~~~~~~~-----~~~~~~f~~d~~~L~it~~~~ 298 (305)
T 3dr2_A 241 PDG--FCVDRGGW--LWSSSGTG-VCVF--DSDGQ-----LLGHIPTPG-----TASNCTFDQAQQRLFITGGPC 298 (305)
T ss_dssp CCS--EEECTTSC--EEECCSSE-EEEE--CTTSC-----EEEEEECSS-----CCCEEEECTTSCEEEEEETTE
T ss_pred CCe--EEECCCCC--EEEecCCc-EEEE--CCCCC-----EEEEEECCC-----ceeEEEEeCCCCEEEEEcCCe
Confidence 222 22355665 33443333 4432 22211 222233332 123456777778888887654
No 211
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=29.45 E-value=9.3e+02 Score=30.12 Aligned_cols=155 Identities=16% Similarity=0.187 Sum_probs=89.2
Q ss_pred EeecccCccceEEeecccc------eEEEEecCC-CceeeeeeeeeccC-CceEEEeEEecCCCceEEEEe---------
Q 047869 1868 HLAFNSIVENYLTVAGYED------CQVLTLNPR-GEVTDRLAIELALQ-GAYIRRVDWVPGSPVQLMVVT--------- 1930 (2233)
Q Consensus 1868 sLafNP~nEdyLAVcGLkD------C~VLTfss~-GeV~DRL~LeL~Le-g~fIIKa~WLPGSQt~LAVVT--------- 1930 (2233)
.+...|.. +.|+-+-+ =.|+-++.. ++|..++.+...-+ -.| .+-|-|+.+ .||++
T Consensus 142 ~~~~~pdG---i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Y--d~~~~p~~~--~mvsS~wg~p~~~~ 214 (462)
T 2ece_A 142 TVHCGPDA---IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAY--DFWWNLPNE--VLVSSEWAVPNTIE 214 (462)
T ss_dssp EEEECSSC---EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCC--CEEEETTTT--EEEECBCCCHHHHT
T ss_pred ceeECCCe---EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccc--eEEECCCCC--EEEEccCcCccccc
Confidence 44444432 66655555 456677655 78877776532211 123 455677765 56677
Q ss_pred ------------cCeEEEEeCcCCCCCCcEEEEcC-CC-CeeEEEEEEecCCcEEEEEEe-----cCCceEEEEecccCC
Q 047869 1931 ------------NKFVKIYDLSQDNISPLHYFTLP-DD-MIVDATLVIASRGKMFLIVLS-----ECGSLYRLELSVEGN 1991 (2233)
Q Consensus 1931 ------------~~FVKIYDLS~D~lSPvyyF~Lp-sG-kIrDaTfv~~e~G~~~ILVLS-----S~G~LY~Qels~s~d 1991 (2233)
.+.|.|||+... ..+..+.+. .| .-+...|.+.++|+..-++.- -+|.|+.-....
T Consensus 215 ~g~~~~~~~~~~~d~V~v~D~~~~--k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~--- 289 (462)
T 2ece_A 215 DGLKLEHLKDRYGNRIHFWDLRKR--KRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED--- 289 (462)
T ss_dssp TCCCTTTHHHHSCCEEEEEETTTT--EEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET---
T ss_pred cccchhhhhhccCCEEEEEECCCC--cEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC---
Confidence 489999999865 344455554 22 346677777888875544444 456776433321
Q ss_pred Cccccceeeeeccccc--------------ccCCeEEEEeccccceeeEEecCCcEEE
Q 047869 1992 VGATPLKEIIQFNDRE--------------IHAKGLSLYFSSTYKLLFLSFQDGTTLV 2035 (2233)
Q Consensus 1992 ~g~~~ltEvvq~~~~q--------------~~~~GVSVyYS~tl~LLF~SY~~G~Sf~ 2035 (2233)
+......+++++..+ ..+..--|..|++=+.|++|-...-++.
T Consensus 290 -g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~Va 346 (462)
T 2ece_A 290 -GKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVR 346 (462)
T ss_dssp -TEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEE
T ss_pred -CceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEE
Confidence 333333333333321 1233455789999999999987554443
No 212
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=29.32 E-value=3.4e+02 Score=29.75 Aligned_cols=106 Identities=17% Similarity=0.120 Sum_probs=60.2
Q ss_pred EEeecccCccceEEeecc-------cceEEEEecCCCceeeeeee-eeccCCceEEEeEEecCCCceEEEEecCeEEEEe
Q 047869 1867 VHLAFNSIVENYLTVAGY-------EDCQVLTLNPRGEVTDRLAI-ELALQGAYIRRVDWVPGSPVQLMVVTNKFVKIYD 1938 (2233)
Q Consensus 1867 lsLafNP~nEdyLAVcGL-------kDC~VLTfss~GeV~DRL~L-eL~Leg~fIIKa~WLPGSQt~LAVVT~~FVKIYD 1938 (2233)
-+++++| +++.|.|+.- +.+.++.++.+| +..+-.+ +. ...+...+.+-+ ...|-|+|.+-|.+||
T Consensus 191 ~gl~~sp-dg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~--~~~~pdgi~~d~--~G~lwv~~~~gv~~~~ 264 (305)
T 3dr2_A 191 NGLAFSP-DEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASV--PDGLPDGFCVDR--GGWLWSSSGTGVCVFD 264 (305)
T ss_dssp EEEEECT-TSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECC--SSSCCCSEEECT--TSCEEECCSSEEEEEC
T ss_pred cceEEcC-CCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEEC--CCCCCCeEEECC--CCCEEEecCCcEEEEC
Confidence 4688877 5677887755 356677776655 4333222 21 111111222333 3346677778899999
Q ss_pred CcCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEe
Q 047869 1939 LSQDNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLEL 1986 (2233)
Q Consensus 1939 LS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qel 1986 (2233)
..- .....+.+|. .+..++|. .+|+ .++|.++ +.||.-++
T Consensus 265 ~~g---~~~~~~~~~~-~~~~~~f~--~d~~-~L~it~~-~~l~~~~~ 304 (305)
T 3dr2_A 265 SDG---QLLGHIPTPG-TASNCTFD--QAQQ-RLFITGG-PCLWMLPL 304 (305)
T ss_dssp TTS---CEEEEEECSS-CCCEEEEC--TTSC-EEEEEET-TEEEEEEC
T ss_pred CCC---CEEEEEECCC-ceeEEEEe--CCCC-EEEEEcC-CeEEEEEC
Confidence 743 3456677776 46777665 5553 4555544 67776543
No 213
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=28.03 E-value=6.6e+02 Score=27.89 Aligned_cols=70 Identities=17% Similarity=0.112 Sum_probs=43.4
Q ss_pred EEEeecccCccceEEeecccceEEEEecCCCceeeeeeeee-------ccCCceEEEeEEec-CCCceEEEEe---cCeE
Q 047869 1866 IVHLAFNSIVENYLTVAGYEDCQVLTLNPRGEVTDRLAIEL-------ALQGAYIRRVDWVP-GSPVQLMVVT---NKFV 1934 (2233)
Q Consensus 1866 VlsLafNP~nEdyLAVcGLkDC~VLTfss~GeV~DRL~LeL-------~Leg~fIIKa~WLP-GSQt~LAVVT---~~FV 1934 (2233)
...|++.| +++ |.|++..+-.|..++++|...-...+-- .-.-.....+.+-| +.+ |.|+- +..|
T Consensus 93 p~gia~d~-~g~-l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~--lyv~d~~~~~~I 168 (329)
T 3fvz_A 93 PHGLSIDT-DGN-YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGA--VFVSDGYCNSRI 168 (329)
T ss_dssp EEEEEECT-TSC-EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCC--EEEEECSSCCEE
T ss_pred ceEEEECC-CCC-EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCe--EEEEeCCCCCeE
Confidence 45788887 444 7788888888999999987421112210 00123567778888 443 33333 5689
Q ss_pred EEEeC
Q 047869 1935 KIYDL 1939 (2233)
Q Consensus 1935 KIYDL 1939 (2233)
++||.
T Consensus 169 ~~~~~ 173 (329)
T 3fvz_A 169 VQFSP 173 (329)
T ss_dssp EEECT
T ss_pred EEEcC
Confidence 99984
No 214
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=26.75 E-value=6.6e+02 Score=27.46 Aligned_cols=152 Identities=13% Similarity=0.130 Sum_probs=83.6
Q ss_pred EEeecccCccceEEeecccceEEEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEecCeEEEEeCcCCCCCC
Q 047869 1867 VHLAFNSIVENYLTVAGYEDCQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTNKFVKIYDLSQDNISP 1946 (2233)
Q Consensus 1867 lsLafNP~nEdyLAVcGLkDC~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~FVKIYDLS~D~lSP 1946 (2233)
++.++.| .++.|.+++...-.|+++++++....... .+..+..+.|-|.-+ |.|.+.+.|.+||+....+.
T Consensus 16 Egp~w~~-~~~~l~~~d~~~~~i~~~d~~~~~~~~~~-----~~~~~~~i~~~~dG~--l~v~~~~~l~~~d~~~g~~~- 86 (297)
T 3g4e_A 16 ESPVWEE-VSNSLLFVDIPAKKVCRWDSFTKQVQRVT-----MDAPVSSVALRQSGG--YVATIGTKFCALNWKEQSAV- 86 (297)
T ss_dssp EEEEEET-TTTEEEEEETTTTEEEEEETTTCCEEEEE-----CSSCEEEEEEBTTSS--EEEEETTEEEEEETTTTEEE-
T ss_pred cCCeEEC-CCCEEEEEECCCCEEEEEECCCCcEEEEe-----CCCceEEEEECCCCC--EEEEECCeEEEEECCCCcEE-
Confidence 3666666 45678888999999999998765432221 134677778887664 77778889999998754432
Q ss_pred cEEEEcCCC----CeeEEEEEEecCCcEEEEEEe----------cCCceEEEEecccCCCccccceeeeecccccccCCe
Q 047869 1947 LHYFTLPDD----MIVDATLVIASRGKMFLIVLS----------ECGSLYRLELSVEGNVGATPLKEIIQFNDREIHAKG 2012 (2233)
Q Consensus 1947 vyyF~LpsG----kIrDaTfv~~e~G~~~ILVLS----------S~G~LY~Qels~s~d~g~~~ltEvvq~~~~q~~~~G 2012 (2233)
.....+.+ .+.|.+ ++++|++++--+. ..|.||.-+-. + ....+.+.+..| .|
T Consensus 87 -~~~~~~~~~~~~~~~di~--~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~--g--~~~~~~~~~~~p------ng 153 (297)
T 3g4e_A 87 -VLATVDNDKKNNRFNDGK--VDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD--H--HVKKYFDQVDIS------NG 153 (297)
T ss_dssp -EEEECCTTCSSEEEEEEE--ECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT--S--CEEEEEEEESBE------EE
T ss_pred -EEEecCCCCCCCCCCCEE--ECCCCCEEEecCCcccccccccCCCcEEEEEECC--C--CEEEEeeccccc------cc
Confidence 22223322 234433 4567764433332 23556643321 1 111111111111 23
Q ss_pred EEEEeccccceeeEEec-CCcEEEEEcCCCc
Q 047869 2013 LSLYFSSTYKLLFLSFQ-DGTTLVGRLSPNA 2042 (2233)
Q Consensus 2013 VSVyYS~tl~LLF~SY~-~G~Sf~a~Ls~~~ 2042 (2233)
+-+|++-+.|+++-+ +++.+...++...
T Consensus 154 --i~~spdg~~lyv~~~~~~~i~~~~~d~~~ 182 (297)
T 3g4e_A 154 --LDWSLDHKIFYYIDSLSYSVDAFDYDLQT 182 (297)
T ss_dssp --EEECTTSCEEEEEEGGGTEEEEEEECTTT
T ss_pred --eEEcCCCCEEEEecCCCCcEEEEeccCCC
Confidence 467777777766544 4555555554333
No 215
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=25.60 E-value=6.4e+02 Score=26.91 Aligned_cols=64 Identities=9% Similarity=-0.043 Sum_probs=37.3
Q ss_pred EEEEeecccCccceEEeecccceEEEEecCCCceeee-eeeeeccCCceEEEeEEecCCCceEEEEecC
Q 047869 1865 EIVHLAFNSIVENYLTVAGYEDCQVLTLNPRGEVTDR-LAIELALQGAYIRRVDWVPGSPVQLMVVTNK 1932 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGLkDC~VLTfss~GeV~DR-L~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~ 1932 (2233)
.+.++++.|.++ .|.|++..+ .|..++.+|++... ........+..+..+.+-|.. .+.|++..
T Consensus 72 ~~~~i~~~~~~g-~l~v~~~~~-~l~~~d~~g~~~~~~~~~~~~~~~~~~~~i~~d~~g--~l~v~~~~ 136 (314)
T 1pjx_A 72 IPAGCQCDRDAN-QLFVADMRL-GLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEG--NLWITAPA 136 (314)
T ss_dssp CEEEEEECSSSS-EEEEEETTT-EEEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTS--CEEEEECB
T ss_pred CCceEEEecCCC-cEEEEECCC-CEEEEeCCCCEEEEEeccCCCccccCCcCEEECCCC--CEEEEecC
Confidence 467888877434 455555544 67778777776422 111111234567788887764 56667654
No 216
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=24.52 E-value=8.8e+02 Score=28.19 Aligned_cols=34 Identities=15% Similarity=0.125 Sum_probs=23.3
Q ss_pred EeecccCccceEEeeccc---ceEEEEecCCCceeee-eee
Q 047869 1868 HLAFNSIVENYLTVAGYE---DCQVLTLNPRGEVTDR-LAI 1904 (2233)
Q Consensus 1868 sLafNP~nEdyLAVcGLk---DC~VLTfss~GeV~DR-L~L 1904 (2233)
.++++| ++++|.|+... ...|+- ..|++..+ +.+
T Consensus 129 ~~~~sp-DG~~l~v~n~~~~~~v~viD--~t~~~~~~~i~~ 166 (373)
T 2mad_H 129 MNANTP-NNADLLFFQFAAGPAVGLVV--QGGSSDDQLLSS 166 (373)
T ss_pred ceEECC-CCCEEEEEecCCCCeEEEEE--CCCCEEeEEcCC
Confidence 778877 78888887643 356654 67787777 533
No 217
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=23.28 E-value=1e+03 Score=28.45 Aligned_cols=115 Identities=12% Similarity=-0.041 Sum_probs=61.0
Q ss_pred EEeEEecCCCceEEEEe-c----CeEEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCC--ceEEEEe
Q 047869 1914 RRVDWVPGSPVQLMVVT-N----KFVKIYDLSQDNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECG--SLYRLEL 1986 (2233)
Q Consensus 1914 IKa~WLPGSQt~LAVVT-~----~FVKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G--~LY~Qel 1986 (2233)
..+.|=|..+. ||.+. . ..|.+||+...... ..+-..+.+.. ..+.++|+.+. ..+.+| .||.-++
T Consensus 153 ~~~~~spDG~~-la~~~~~~~~~~~i~~~d~~~g~~~---~l~~~~~~~~~--~~~SpDG~~l~-~~~~~~~~~i~~~d~ 225 (582)
T 3o4h_A 153 FGFVSDIRGDL-IAGLGFFGGGRVSLFTSNLSSGGLR---VFDSGEGSFSS--ASISPGMKVTA-GLETAREARLVTVDP 225 (582)
T ss_dssp CEEEEEEETTE-EEEEEEEETTEEEEEEEETTTCCCE---EECCSSCEEEE--EEECTTSCEEE-EEECSSCEEEEEECT
T ss_pred ceEEECCCCCE-EEEEEEcCCCCeEEEEEcCCCCCce---EeecCCCcccc--ceECCCCCEEE-EccCCCeeEEEEEcC
Confidence 46678887766 44333 2 35888998765532 22222344544 34468897554 666677 7887666
Q ss_pred cccCCCccccceeeeecccccccCCeEEEEeccccceeeEEecCCcEEEEEc
Q 047869 1987 SVEGNVGATPLKEIIQFNDREIHAKGLSLYFSSTYKLLFLSFQDGTTLVGRL 2038 (2233)
Q Consensus 1987 s~s~d~g~~~ltEvvq~~~~q~~~~GVSVyYS~tl~LLF~SY~~G~Sf~a~L 2038 (2233)
.. +.. ..++..-..+......+-....+|++-+++|.+..+|+.-+-.+
T Consensus 226 ~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 226 RD-GSV--EDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp TT-CCE--EECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred CC-CcE--EEccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 41 111 11111000000000111122338888877888888888777665
No 218
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=23.14 E-value=8.8e+02 Score=27.66 Aligned_cols=79 Identities=8% Similarity=0.063 Sum_probs=49.8
Q ss_pred cceEEEEeecccCccceEEeecc---------cceEEEEecC-CCceeeeeeeeecc--CCceEEEeEEecCCCceEEEE
Q 047869 1862 VRFEIVHLAFNSIVENYLTVAGY---------EDCQVLTLNP-RGEVTDRLAIELAL--QGAYIRRVDWVPGSPVQLMVV 1929 (2233)
Q Consensus 1862 VpFeVlsLafNP~nEdyLAVcGL---------kDC~VLTfss-~GeV~DRL~LeL~L--eg~fIIKa~WLPGSQt~LAVV 1929 (2233)
++..- +++++| ++++|.|+.. .+-.|..|+. .+++..++.+.... .|.+...+.+-|..+. |.|+
T Consensus 49 ~g~~p-~i~~sp-dg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~-l~v~ 125 (361)
T 2oiz_A 49 TAFNG-HVQVSN-DGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKF-IVLQ 125 (361)
T ss_dssp CCEEE-EEEECT-TSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSE-EEEE
T ss_pred CCCCC-ceEECC-CCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCE-EEEE
Confidence 34444 889999 7889998863 3445555553 56777777664322 2455555667776654 4443
Q ss_pred e---cCeEEEEeCcCCC
Q 047869 1930 T---NKFVKIYDLSQDN 1943 (2233)
Q Consensus 1930 T---~~FVKIYDLS~D~ 1943 (2233)
. .+.|.|||+....
T Consensus 126 n~~~~~~v~v~d~~~~~ 142 (361)
T 2oiz_A 126 NASPATSIGIVDVAKGD 142 (361)
T ss_dssp EESSSEEEEEEETTTTE
T ss_pred CCCCCCeEEEEECCCCc
Confidence 2 3579999998653
No 219
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=22.77 E-value=1.1e+03 Score=28.56 Aligned_cols=116 Identities=14% Similarity=0.090 Sum_probs=71.3
Q ss_pred EEEEeecccCccceEEee----cccceEEEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEe----cCeEEE
Q 047869 1865 EIVHLAFNSIVENYLTVA----GYEDCQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVT----NKFVKI 1936 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVc----GLkDC~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT----~~FVKI 1936 (2233)
.|++|+|.|-.-|.+-|+ ..+++..+.++++++...+..+. .| ..+++-=+|+ .++.... .+.|++
T Consensus 88 ~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s---~g-~~~~v~~l~~--g~lv~ss~~g~d~~V~~ 161 (356)
T 2w18_A 88 PVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLK---SG-NIKAVLGLTK--RRLVSSSGTLSDQQVEV 161 (356)
T ss_dssp CEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEE---EE-EEEEEEEETT--TEEEEEESSSTTCEEEE
T ss_pred eeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEe---CC-CeEEEEecCC--CcEEEecccCCCCcEEE
Confidence 588999999777777765 34577788888885555444443 22 3344433443 4565553 779999
Q ss_pred EeCcCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEecCCceEEEEec
Q 047869 1937 YDLSQDNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSECGSLYRLELS 1987 (2233)
Q Consensus 1937 YDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS~G~LY~Qels 1987 (2233)
|+++.|-- -.....+.+..+++.+|-..+....+++--|.+|.|..=++.
T Consensus 162 ~~~s~dG~-~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~ 211 (356)
T 2w18_A 162 MTFAEDGG-GKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLK 211 (356)
T ss_dssp EEECTTSC-EEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETT
T ss_pred EEECCCCc-eeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECC
Confidence 99988753 333455666677777776644333466666889998876665
No 220
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=21.86 E-value=1.2e+03 Score=28.65 Aligned_cols=70 Identities=13% Similarity=0.193 Sum_probs=48.4
Q ss_pred EEEEeecccCccceEEeeccc--------ceEEEEecCC-Ccee--eeeeeeeccCCceEEEeEEecCCCceEEEEecCe
Q 047869 1865 EIVHLAFNSIVENYLTVAGYE--------DCQVLTLNPR-GEVT--DRLAIELALQGAYIRRVDWVPGSPVQLMVVTNKF 1933 (2233)
Q Consensus 1865 eVlsLafNP~nEdyLAVcGLk--------DC~VLTfss~-GeV~--DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~~F 1933 (2233)
.|.+++|+| ++++||.++-. +-.|..++-. |+.. .++ . ..+..+.|=|..+. ||.+..+-
T Consensus 61 ~~~~~~~Sp-Dg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l------~-~~~~~~~~SPDG~~-la~~~~~~ 131 (719)
T 1z68_A 61 NASNYGLSP-DRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL------P-RPIQYLCWSPVGSK-LAYVYQNN 131 (719)
T ss_dssp TCSEEEECT-TSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC------C-SSBCCEEECSSTTC-EEEEETTE
T ss_pred ceeeEEECC-CCCeEEEEecCceeEEeecceEEEEEECCCCccccceec------C-cccccceECCCCCE-EEEEECCe
Confidence 356889998 88899988752 3556666544 3331 222 1 23667899999876 88888889
Q ss_pred EEEEeCcCCC
Q 047869 1934 VKIYDLSQDN 1943 (2233)
Q Consensus 1934 VKIYDLS~D~ 1943 (2233)
|+|||+....
T Consensus 132 i~~~~~~~g~ 141 (719)
T 1z68_A 132 IYLKQRPGDP 141 (719)
T ss_dssp EEEESSTTSC
T ss_pred EEEEeCCCCC
Confidence 9999997544
No 221
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=21.76 E-value=27 Score=33.76 Aligned_cols=29 Identities=31% Similarity=0.484 Sum_probs=23.8
Q ss_pred ceEeeccCCCCCCceeehhhhh-hhcCCCcEEEE
Q 047869 1604 HWYFCYTCDLTVSKGCCSVCAK-VCHRGHRVVYS 1636 (2233)
Q Consensus 1604 ~~Y~C~TC~l~~~~GVC~aCA~-vCHkGHdVvyl 1636 (2233)
--|.|.+|.. .||..|.. .=|+||+++.+
T Consensus 70 l~~fC~~~~~----~iC~~C~~~~~H~~H~~~~l 99 (101)
T 2jun_A 70 VNMYCVTDDQ----LICALCKLVGRHRDHQVAAL 99 (101)
T ss_dssp CCEEETTTTE----EECHHHHHHTTTSSSCBCCC
T ss_pred ceEECCCCCC----ccchhcCCCCCcCCCCeecC
Confidence 3578998865 89999997 79999998754
No 222
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=20.61 E-value=4.2e+02 Score=34.96 Aligned_cols=98 Identities=19% Similarity=0.256 Sum_probs=51.7
Q ss_pred EEEEeCcCCCCCCcEEEEcCCCCe-eEEEEEEec-CCcEEEEEEecCCceEEEEeccc---CCCccccceeeeecccc--
Q 047869 1934 VKIYDLSQDNISPLHYFTLPDDMI-VDATLVIAS-RGKMFLIVLSECGSLYRLELSVE---GNVGATPLKEIIQFNDR-- 2006 (2233)
Q Consensus 1934 VKIYDLS~D~lSPvyyF~LpsGkI-rDaTfv~~e-~G~~~ILVLSS~G~LY~Qels~s---~d~g~~~ltEvvq~~~~-- 2006 (2233)
+.||-+....-.=+..+.+|..-+ --+||...+ ++.+.|.|++++|.+|+-.++.. ++. .....+|.+.-..
T Consensus 79 L~l~~vd~~~~~~ti~i~FP~~i~~p~~~f~~~e~~d~L~I~vIt~s~~lytl~L~~dff~~~~-~~~~~~W~k~~~Py~ 157 (729)
T 3f7f_A 79 LTFYPLSDAYHGKTINIHLPNASMNQRYTLTIQEVEQQLLVNVILKDGSFLTLQLPLSFLFSSA-NTLNGEWFHLQNPYD 157 (729)
T ss_dssp EEEEEGGGTTTSCEEEEECSSCBTTGGGGEEEEECSSEEEEEEEBSSSCEEEEEEEHHHHHSCC-SCCCSCCBCCCCCSC
T ss_pred EEEEEcccccCCCEEEEECCccccCCCceEEecCCCCEEEEEEEccCCcEEEEEEcHHHhcCcc-ccCchhhceeecCCc
Confidence 344443333322356677776433 244555444 47788999999999999988742 111 1233555432211
Q ss_pred cccCCeEEEEeccccceeeEEecCCcE
Q 047869 2007 EIHAKGLSLYFSSTYKLLFLSFQDGTT 2033 (2233)
Q Consensus 2007 q~~~~GVSVyYS~tl~LLF~SY~~G~S 2033 (2233)
=.-..-.-++-.. -+.|+||..+|.=
T Consensus 158 F~~R~Ph~L~avs-~~~liVsL~DGGL 183 (729)
T 3f7f_A 158 FTVRVPHFLFYVS-PQFSVVFLEDGGL 183 (729)
T ss_dssp TTTSCEEEEEECS-SSBEEEEETTSCE
T ss_pred ccccCCcEEEEEC-CCeEEEEEcCCCE
Confidence 0011122223322 3448888888863
No 223
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=20.54 E-value=5.3e+02 Score=33.78 Aligned_cols=102 Identities=15% Similarity=0.135 Sum_probs=57.5
Q ss_pred ceEEEEeecccCccceEEeeccc-ceEEEEecCCCceeeeeeeeeccCCceEEEeEEecCCCceEEEEec----------
Q 047869 1863 RFEIVHLAFNSIVENYLTVAGYE-DCQVLTLNPRGEVTDRLAIELALQGAYIRRVDWVPGSPVQLMVVTN---------- 1931 (2233)
Q Consensus 1863 pFeVlsLafNP~nEdyLAVcGLk-DC~VLTfss~GeV~DRL~LeL~Leg~fIIKa~WLPGSQt~LAVVT~---------- 1931 (2233)
...+.+++|+| ++++||+++-. +++++-+ ..|++..-+ .-....+..+.|-|..+. ||.+..
T Consensus 378 ~~~~~~~~~Sp-DG~~la~~~~~~~v~~~d~-~tg~~~~~~----~~~~~~v~~~~~SpDG~~-la~~~~~~~~~~~~~~ 450 (1045)
T 1k32_A 378 LGNVFAMGVDR-NGKFAVVANDRFEIMTVDL-ETGKPTVIE----RSREAMITDFTISDNSRF-IAYGFPLKHGETDGYV 450 (1045)
T ss_dssp CCSEEEEEECT-TSSEEEEEETTSEEEEEET-TTCCEEEEE----ECSSSCCCCEEECTTSCE-EEEEEEECSSTTCSCC
T ss_pred ccceeeeEECC-CCCEEEEECCCCeEEEEEC-CCCceEEec----cCCCCCccceEECCCCCe-EEEEecCccccccCCC
Confidence 35678899998 78888887654 3444443 234432111 112345677889999876 444433
Q ss_pred -CeEEEEeCcCCCCCCcEEEEcCCCCeeEEEEEEecCCcEEEEEEec
Q 047869 1932 -KFVKIYDLSQDNISPLHYFTLPDDMIVDATLVIASRGKMFLIVLSE 1977 (2233)
Q Consensus 1932 -~FVKIYDLS~D~lSPvyyF~LpsGkIrDaTfv~~e~G~~~ILVLSS 1977 (2233)
..|+|||+.... ...+....-......+.++|+.. +..|.
T Consensus 451 ~~~i~l~d~~~g~-----~~~l~~~~~~~~~~~~spdG~~l-~~~s~ 491 (1045)
T 1k32_A 451 MQAIHVYDMEGRK-----IFAATTENSHDYAPAFDADSKNL-YYLSY 491 (1045)
T ss_dssp EEEEEEEETTTTE-----EEECSCSSSBEEEEEECTTSCEE-EEEES
T ss_pred CCeEEEEECCCCc-----EEEeeCCCcccCCceEcCCCCEE-EEEec
Confidence 379999997532 22333322222334456778644 34444
Done!