BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047873
(464 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 574 bits (1480), Expect = e-163, Method: Compositional matrix adjust.
Identities = 279/485 (57%), Positives = 346/485 (71%), Gaps = 29/485 (5%)
Query: 1 PHFRLTLHAYSTMVHFLVAHKMHSQARDLLHLIVSKKGMGSSASLFASILETRGTHLPGL 60
P FR T+ Y + FL H+M ++A+ L+ L+VS+KG S++S+F S++E R T + G
Sbjct: 112 PGFRFTVETYFVLARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFISLVEMRVTPMCGF 171
Query: 61 VLDALMIVYVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYLEI 120
++DALMI Y DLGF+ DAIQCFRL RKH F +P RGC L+DRMM+ N GFY+EI
Sbjct: 172 LVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEI 231
Query: 121 LDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNL 180
LD G+ +VYVFN+LM+K CKEG I DAQ VFDE KR L T VSFNTLING+CK NL
Sbjct: 232 LDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNL 291
Query: 181 DEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTL 240
DEGFRLK ME S RPDV+TYSALIN LCKEN++D A L EMC+RGL PNDVIFTTL
Sbjct: 292 DEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTL 351
Query: 241 IDGHCKNGRIDMA-----------------------------GDMKEARKIVDEMCTNGL 271
I GH +NG ID+ GD+ AR IVD M GL
Sbjct: 352 IHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGL 411
Query: 272 NPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAER 331
PDKITYT L+DGFC+ GD+E+AL+IRKEM + GIELD V F+AL+ G C+ G+V++AER
Sbjct: 412 RPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAER 471
Query: 332 MLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLC 391
LREML+ G+KPDD TYTM++D FCK GD +TGF+LLKEM+SDGH+P+V TYN L+NGLC
Sbjct: 472 ALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLC 531
Query: 392 KHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPEDFDKLQSEKGLVSDYACYT 451
K GQ+KNA+MLLD ML++GVVPDDITYN LLEGH +H N + E G+V+D A Y
Sbjct: 532 KLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEIGIVADLASYK 591
Query: 452 SLVSK 456
S+V++
Sbjct: 592 SIVNE 596
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 249 bits (637), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 153/502 (30%), Positives = 253/502 (50%), Gaps = 38/502 (7%)
Query: 1 PHFRLTLHAYSTMVHFLVAHKMHSQARDLLHLIVSKKGMGSSASL-FASILETRGT-HLP 58
PH TL +H L K++ A+ L + +K ASL F S+ ET +
Sbjct: 74 PHQFFTLRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYST 133
Query: 59 GLVLDALMIVYVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLP-TVTLGFY 117
V D ++ Y L +D A+ L + H F ++D +R+ + +
Sbjct: 134 SSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVF 193
Query: 118 LEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKA 177
E+L+ SP+V+ +N+L+ C G I A +FD+ +G V++NTLI+G+CK
Sbjct: 194 KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKL 253
Query: 178 KNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIF 237
+ +D+GF+L M G+ P++ +Y+ +INGLC+E R+ + +L EM RG + ++V +
Sbjct: 254 RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTY 313
Query: 238 TTLIDGHCKNGRIDM-----------------------------AGDMKEARKIVDEMCT 268
TLI G+CK G AG+M A + +D+M
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV 373
Query: 269 NGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVE 328
GL P++ TYT L+DGF ++G + A + +EM G V + ALI+G C GK+ +
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMED 433
Query: 329 AERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMN 388
A +L +M + GL PD +Y+ V+ FC++ D R+ +EM G P TY++L+
Sbjct: 434 AIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQ 493
Query: 389 GLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPEDFDKLQS---EKGLVS 445
G C+ + K A L + ML +G+ PD+ TY L+ +C G+ E +L + EKG++
Sbjct: 494 GFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLP 553
Query: 446 DYACYTSLV---SKSSKYRQKR 464
D Y+ L+ +K S+ R+ +
Sbjct: 554 DVVTYSVLINGLNKQSRTREAK 575
Score = 227 bits (579), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 114/330 (34%), Positives = 187/330 (56%), Gaps = 29/330 (8%)
Query: 124 GYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEG 183
G P++ +NV+++ LC+EG++K+ V E +RG V++NTLI G+CK N +
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329
Query: 184 FRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDG 243
+ + M G+ P V TY++LI+ +CK ++ A L +M RGL PN+ +TTL+DG
Sbjct: 330 LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDG 389
Query: 244 HCKNGRIDMA-----------------------------GDMKEARKIVDEMCTNGLNPD 274
+ G ++ A G M++A ++++M GL+PD
Sbjct: 390 FSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD 449
Query: 275 KITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLR 334
++Y+ +L GFC+ D++ AL +++EM+++GI+ D + +++LI GFC + EA +
Sbjct: 450 VVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYE 509
Query: 335 EMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHG 394
EML+VGL PD+ TYT +I+ +C GD + +L EM G LP V TY+ L+NGL K
Sbjct: 510 EMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQS 569
Query: 395 QLKNANMLLDTMLDLGVVPDDITYNILLEG 424
+ + A LL + VP D+TY+ L+E
Sbjct: 570 RTREAKRLLLKLFYEESVPSDVTYHTLIEN 599
Score = 179 bits (453), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 182/368 (49%), Gaps = 44/368 (11%)
Query: 114 LGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLING 173
L + E+L +G +PSV + L+H +CK G + A D+ RGL ++ TL++G
Sbjct: 330 LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDG 389
Query: 174 HCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPN 233
+ ++E +R+ M +G P V TY+ALING C +++DA +L +M E+GL+P+
Sbjct: 390 FSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD 449
Query: 234 DVIFTTLIDGHCKNGRIDMAGDMK-----------------------------EARKIVD 264
V ++T++ G C++ +D A +K EA + +
Sbjct: 450 VVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYE 509
Query: 265 EMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGG 324
EM GL PD+ TYT L++ +C EGDLE AL + EM+++G+ D V ++ LI+G +
Sbjct: 510 EMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQS 569
Query: 325 KVVEAERMLREMLKVGLKPDDATY-TMVIDC--------------FCKNGDTKTGFRLLK 369
+ EA+R+L ++ P D TY T++ +C FC G ++ +
Sbjct: 570 RTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFE 629
Query: 370 EMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHG 429
M H P YN +++G C+ G ++ A L M+ G + +T L++ K G
Sbjct: 630 SMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEG 689
Query: 430 NPEDFDKL 437
+ + +
Sbjct: 690 KVNELNSV 697
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 176/327 (53%), Gaps = 21/327 (6%)
Query: 119 EILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAK 178
E+ D G+SPSV +N L++ C GK++DA V ++ ++GL VS++T+++G C++
Sbjct: 405 EMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSY 464
Query: 179 NLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFT 238
++DE R+K M G++PD TYS+LI G C++ R +A L EM GL P++ +T
Sbjct: 465 DVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYT 524
Query: 239 TLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESA---- 294
LI+ +C M GD+++A ++ +EM G+ PD +TY++L++G K+ A
Sbjct: 525 ALINAYC------MEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578
Query: 295 LDIRKE-----------MIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKP 343
L + E +I+ ++ + +LI GFC G + EA+++ ML KP
Sbjct: 579 LKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKP 638
Query: 344 DDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLL 403
D Y ++I C+ GD + + L KEM G L T AL+ L K G++ N ++
Sbjct: 639 DGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVI 698
Query: 404 DTMLDLGVVPDDITYNILLEGHCKHGN 430
+L + + +L+E + + GN
Sbjct: 699 VHVLRSCELSEAEQAKVLVEINHREGN 725
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 107/267 (40%), Gaps = 79/267 (29%)
Query: 119 EILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAK 178
E+++ G P ++ L+ C++ + K+A +++E + GL ++ LIN +C
Sbjct: 475 EMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEG 534
Query: 179 NLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFT 238
+L++ +L + M G+ PDV TYS LINGL K++R +A+ LL ++ P+DV +
Sbjct: 535 DLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYH 594
Query: 239 TLID---------------GHC-----------------KNGRID------------MAG 254
TLI+ G C KN + D AG
Sbjct: 595 TLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAG 654
Query: 255 DMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEG------------------------- 289
D+++A + EM +G +T L+ KEG
Sbjct: 655 DIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAK 714
Query: 290 ----------DLESALDIRKEMIKRGI 306
+++ LD+ EM K G
Sbjct: 715 VLVEINHREGNMDVVLDVLAEMAKDGF 741
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 244 bits (622), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 143/481 (29%), Positives = 239/481 (49%), Gaps = 53/481 (11%)
Query: 29 LLHLIVSKKGMGSSASLFASILETRGTHLPG--------------------LVLDALMIV 68
++HL V+ K + + SL +S E ++ V D V
Sbjct: 125 VIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQV 184
Query: 69 YVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVT-LGFYLEILDYGYSP 127
VD G L +A + F + + + C + R+ + T T + + E + G
Sbjct: 185 LVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCW 244
Query: 128 SVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLK 187
+V +N+++H +C+ G+IK+A + +G +S++T++NG+C+ LD+ ++L
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 188 SVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKN 247
VM+ G++P+ Y Y ++I LC+ +L +AE EM +G+ P+ V++TTLIDG CK
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 248 GRIDMA-----------------------------GDMKEARKIVDEMCTNGLNPDKITY 278
G I A GDM EA K+ EM GL PD +T+
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 279 TILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLK 338
T L++G+CK G ++ A + MI+ G + V +T LI G C+ G + A +L EM K
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 339 VGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKN 398
+GL+P+ TY +++ CK+G+ + +L+ E + G TY LM+ CK G++
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 399 ANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPEDFDKLQS---EKGLVSDYACYTSLVS 455
A +L ML G+ P +T+N+L+ G C HG ED +KL + KG+ + + SLV
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVK 604
Query: 456 K 456
+
Sbjct: 605 Q 605
Score = 229 bits (585), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 119/344 (34%), Positives = 195/344 (56%), Gaps = 9/344 (2%)
Query: 124 GYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEG 183
G P+ Y++ ++ LC+ K+ +A+ F E ++G+ V + TLI+G CK ++
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 184 FRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDG 243
+ M + PDV TY+A+I+G C+ + +A L HEM +GL P+ V FT LI+G
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430
Query: 244 HCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIK 303
+CK AG MK+A ++ + M G +P+ +TYT L+DG CKEGDL+SA ++ EM K
Sbjct: 431 YCK------AGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 304 RGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKT 363
G++ + + ++++G C+ G + EA +++ E GL D TYT ++D +CK+G+
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 364 GFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLE 423
+LKEM G P + T+N LMNG C HG L++ LL+ ML G+ P+ T+N L++
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVK 604
Query: 424 GHCKHGNPEDFDKLQSE---KGLVSDYACYTSLVSKSSKYRQKR 464
+C N + + + +G+ D Y +LV K R +
Sbjct: 605 QYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMK 648
Score = 218 bits (554), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 123/353 (34%), Positives = 195/353 (55%), Gaps = 13/353 (3%)
Query: 116 FYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHC 175
F+ E+ +P V + ++ C+ G + +A +F E +GL +V+F LING+C
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 176 KAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDV 235
KA ++ + FR+ + M +G P+V TY+ LI+GLCKE LD A LLHEM + GL PN
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 236 IFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESAL 295
+ ++++G CK+G I+ EA K+V E GLN D +TYT L+D +CK G+++ A
Sbjct: 493 TYNSIVNGLCKSGNIE------EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 296 DIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCF 355
+I KEM+ +G++ V F L++GFC G + + E++L ML G+ P+ T+ ++ +
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 356 CKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDD 415
C + K + K+M S G P +TY L+ G CK +K A L M G
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666
Query: 416 ITYNILLEGHCKHGN----PEDFDKLQSEKGLVSDYACYTSLVSKSSKYRQKR 464
TY++L++G K E FD+++ E GL +D + +KY+ KR
Sbjct: 667 STYSVLIKGFLKRKKFLEAREVFDQMRRE-GLAADKEIFDFF--SDTKYKGKR 716
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 107/249 (42%), Gaps = 64/249 (25%)
Query: 119 EILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAK 178
E+ G P+++ +N +++ LCK G I++A + EF GL+A V++ TL++ +CK+
Sbjct: 481 EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 540
Query: 179 NLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLH--------------- 223
+D+ + M G G++P + T++ L+NG C L+D E LL+
Sbjct: 541 EMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN 600
Query: 224 --------------------EMCERGLTPNDVIFTTLIDGHCKNGRIDMAG----DMK-- 257
+MC RG+ P+ + L+ GHCK + A +MK
Sbjct: 601 SLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK 660
Query: 258 -----------------------EARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESA 294
EAR++ D+M GL DK + D K ++
Sbjct: 661 GFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTI 720
Query: 295 LDIRKEMIK 303
+D E+I+
Sbjct: 721 VDPIDEIIE 729
Score = 79.0 bits (193), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 6/157 (3%)
Query: 120 ILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKN 179
+L G +P+ FN L+ + C +K A ++ + RG+ ++ L+ GHCKA+N
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 646
Query: 180 LDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTT 239
+ E + L M+G G V TYS LI G K + +A + +M GL + IF
Sbjct: 647 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDF 706
Query: 240 LIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKI 276
D K R D D +DE+ N L +++
Sbjct: 707 FSDTKYKGKRPDTIVDP------IDEIIENYLVDEQL 737
Score = 38.9 bits (89), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Query: 105 MRTNLPTVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATA 164
+R NL T Y ++ G P + L+ CK +K+A +F E +G +
Sbjct: 608 IRNNLKAAT-AIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666
Query: 165 VSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPD 198
+++ LI G K K E + M G+ D
Sbjct: 667 STYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 241 bits (614), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 147/474 (31%), Positives = 243/474 (51%), Gaps = 22/474 (4%)
Query: 3 FRLTLHAYSTMVHFLVAHKMHSQARDLLHLIVSKKGMGSSASLFASILETRGTHLPGL-V 61
F+ ++ +Y + H L +M+ A +L +V K + +F + TR +PG V
Sbjct: 138 FKHSVESYCIVAHILFCARMYYDANSVLKEMVLSK---ADCDVFDVLWSTRNVCVPGFGV 194
Query: 62 LDALMIVYVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYLEIL 121
DAL V +DLG L++AIQCF +++ R C L+ R + F+ +++
Sbjct: 195 FDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMI 254
Query: 122 DYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLD 181
G P+V+ +N+++ +CKEG ++ A+ +F+E RGL V++N++I+G K LD
Sbjct: 255 GAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLD 314
Query: 182 EGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLI 241
+ M+ PDV TY+ALIN CK +L EM GL PN V ++TL+
Sbjct: 315 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLV 374
Query: 242 DGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEM 301
D CK G M++A K +M GL P++ TYT L+D CK G+L A + EM
Sbjct: 375 DAFCKEGM------MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM 428
Query: 302 IKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDT 361
++ G+E + V +TALI G C ++ EAE + +M G+ P+ A+Y +I F K +
Sbjct: 429 LQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNM 488
Query: 362 KTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNIL 421
LL E++ G P + Y + GLC +++ A ++++ M + G+ + + Y L
Sbjct: 489 DRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTL 548
Query: 422 LEGHCKHGNP-------EDFDKLQSEKGLVS-----DYACYTSLVSKSSKYRQK 463
++ + K GNP ++ +L E +V+ D C LVSK+ Y +
Sbjct: 549 MDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNR 602
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 170/322 (52%), Gaps = 7/322 (2%)
Query: 119 EILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAK 178
E+L G +V + L+ LC ++K+A+ +F + G+ S+N LI+G KAK
Sbjct: 427 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 486
Query: 179 NLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFT 238
N+D L + ++G G++PD+ Y I GLC +++ A+++++EM E G+ N +I+T
Sbjct: 487 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYT 546
Query: 239 TLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIR 298
TL+D + K +G+ E ++DEM + +T+ +L+DG CK + A+D
Sbjct: 547 TLMDAYFK------SGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYF 600
Query: 299 KEMIKR-GIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCK 357
+ G++ + FTA+I G C+ +V A + +M++ GL PD YT ++D K
Sbjct: 601 NRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFK 660
Query: 358 NGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDIT 417
G+ L +M G + Y +L+ GL QL+ A L+ M+ G+ PD++
Sbjct: 661 QGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVL 720
Query: 418 YNILLEGHCKHGNPEDFDKLQS 439
+L+ H + G ++ +LQS
Sbjct: 721 CISVLKKHYELGCIDEAVELQS 742
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 110/228 (48%), Gaps = 7/228 (3%)
Query: 119 EILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAK 178
E+ + G + ++ LM K G + + DE + + T V+F LI+G CK K
Sbjct: 532 EMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNK 591
Query: 179 NLDEGF-RLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIF 237
+ + + G++ + ++A+I+GLCK+N+++ A L +M ++GL P+ +
Sbjct: 592 LVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAY 651
Query: 238 TTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDI 297
T+L+DG+ K G + EA + D+M G+ D + YT L+ G L+ A
Sbjct: 652 TSLMDGNFKQGNV------LEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSF 705
Query: 298 RKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDD 345
+EMI GI D V +++ G + EA + ++K L D
Sbjct: 706 LEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTSD 753
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 126/274 (45%), Gaps = 25/274 (9%)
Query: 6 TLHAYSTMVHFLVAHKMHSQARDLLHLIVSKKGMG---------------------SSAS 44
L +Y+ ++H V K +A +LL+ + KG G +A
Sbjct: 471 NLASYNALIHGFVKAKNMDRALELLNEL---KGRGIKPDLLLYGTFIWGLCSLEKIEAAK 527
Query: 45 LFASILETRGTHLPGLVLDALMIVYVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRM 104
+ + ++ G L+ LM Y G + + +++ + LID +
Sbjct: 528 VVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGL 587
Query: 105 MRTNLPTVTLGFYLEIL-DYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHAT 163
+ L + + ++ I D+G + +F ++ LCK+ +++ A +F++ ++GL
Sbjct: 588 CKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPD 647
Query: 164 AVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLH 223
++ +L++G+ K N+ E L+ M GM+ D+ Y++L+ GL N+L A L
Sbjct: 648 RTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLE 707
Query: 224 EMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMK 257
EM G+ P++V+ +++ H + G ID A +++
Sbjct: 708 EMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQ 741
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 239 bits (611), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 153/493 (31%), Positives = 258/493 (52%), Gaps = 55/493 (11%)
Query: 8 HAYSTMVHFLVAHKMHSQ---ARDLLHLIVSKKGMGSSASLFASILETRGTHLPGLVLDA 64
HA S ++ +++ K+HSQ + LLH + + + L+ I+ +++ L+
Sbjct: 57 HAQSLLLQ-VISGKIHSQFFTSSSLLHYLTESETSKTKFRLYEVII---NSYVQSQSLN- 111
Query: 65 LMIVY----VDLGFLDDAIQCFR--------------------------LLRKHYFRIPA 94
L I Y VD GF+ + CF +L + F I
Sbjct: 112 LSISYFNEMVDNGFVPGS-NCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILI 170
Query: 95 RGCRCLIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDE 154
+GC C + ++ +E+ ++G+SP+V ++ L+ CK+G+I+ A+ +F E
Sbjct: 171 KGC-CEAGEIEKS------FDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFE 223
Query: 155 FGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENR 214
GK GL A ++ LING K +GF + M+ G+ P++YTY+ ++N LCK+ R
Sbjct: 224 MGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGR 283
Query: 215 LDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPD 274
DA + EM ERG++ N V + TLI G C+ +++ EA K+VD+M ++G+NP+
Sbjct: 284 TKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLN------EANKVVDQMKSDGINPN 337
Query: 275 KITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLR 334
ITY L+DGFC G L AL + +++ RG+ V + L+SGFCR G A +M++
Sbjct: 338 LITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVK 397
Query: 335 EMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHG 394
EM + G+KP TYT++ID F ++ + + +L M G +P V TY+ L++G C G
Sbjct: 398 EMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKG 457
Query: 395 QLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPEDFDKL---QSEKGLVSDYACYT 451
Q+ A+ L +M++ P+++ YN ++ G+CK G+ KL EK L + A Y
Sbjct: 458 QMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYR 517
Query: 452 SLVSKSSKYRQKR 464
++ K R+ +
Sbjct: 518 YMIEVLCKERKSK 530
Score = 209 bits (532), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 179/320 (55%), Gaps = 6/320 (1%)
Query: 95 RGCRCLIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDE 154
R LI+ + + + Y ++ + G P++Y +N +M++LCK+G+ KDA VFDE
Sbjct: 234 RTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDE 293
Query: 155 FGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENR 214
+RG+ V++NTLI G C+ L+E ++ M+ G+ P++ TY+ LI+G C +
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGK 353
Query: 215 LDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPD 274
L A L ++ RGL+P+ V + L+ G C+ G D A K+V EM G+ P
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKG------DTSGAAKMVKEMEERGIKPS 407
Query: 275 KITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLR 334
K+TYTIL+D F + ++E A+ +R M + G+ D ++ LI GFC G++ EA R+ +
Sbjct: 408 KVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFK 467
Query: 335 EMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHG 394
M++ +P++ Y +I +CK G + +LLKEM P V +Y ++ LCK
Sbjct: 468 SMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKER 527
Query: 395 QLKNANMLLDTMLDLGVVPD 414
+ K A L++ M+D G+ P
Sbjct: 528 KSKEAERLVEKMIDSGIDPS 547
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 74/141 (52%)
Query: 100 LIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRG 159
LID R++ + L + + G P V+ ++VL+H C +G++ +A +F ++
Sbjct: 414 LIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKN 473
Query: 160 LHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAE 219
V +NT+I G+CK + +L ME + P+V +Y +I LCKE + +AE
Sbjct: 474 CEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAE 533
Query: 220 LLLHEMCERGLTPNDVIFTTL 240
L+ +M + G+ P+ I + +
Sbjct: 534 RLVEKMIDSGIDPSTSILSLI 554
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 228 bits (582), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 145/524 (27%), Positives = 246/524 (46%), Gaps = 73/524 (13%)
Query: 1 PHFRLTLHAYSTMVHFLVAHKMHSQARDLLHLIVSKKGMG--SSASLFASILETRGTHLP 58
P+F+ T + S M+H LV S A+ L ++ + G+ + S G++
Sbjct: 107 PNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSN-- 164
Query: 59 GLVLDALMIVYVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYL 118
V D L+ YV L +A + F LLR F + C LI ++R + G Y
Sbjct: 165 DSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQ 224
Query: 119 EILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAK 178
EI G +VY N++++ LCK+GK++ + ++G++ V++NTLI+ +
Sbjct: 225 EISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKG 284
Query: 179 NLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFT 238
++E F L + M G G P VYTY+ +INGLCK + + A+ + EM GL+P+ +
Sbjct: 285 LMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYR 344
Query: 239 TLIDGHCKNGRI----DMAGDMKEARKIVDEMCTN------------------------- 269
+L+ CK G + + DM+ + D +C +
Sbjct: 345 SLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 404
Query: 270 GLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEA 329
GL PD + YTIL+ G+C++G + A+++R EM+++G +D V + ++ G C+ + EA
Sbjct: 405 GLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEA 464
Query: 330 ERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRS--------------DG 375
+++ EM + L PD T T++ID CK G+ + L ++M+ DG
Sbjct: 465 DKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDG 524
Query: 376 H---------------------LPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPD 414
LP +Y+ L+N LC G L A + D M+ + P
Sbjct: 525 FGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPT 584
Query: 415 DITYNILLEGHCKHGNPED----FDKLQSEKGLVSDYACYTSLV 454
+ N +++G+C+ GN D +K+ SE G V D Y +L+
Sbjct: 585 VMICNSMIKGYCRSGNASDGESFLEKMISE-GFVPDCISYNTLI 627
Score = 192 bits (487), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 189/365 (51%), Gaps = 34/365 (9%)
Query: 124 GYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEG 183
G+SP VY +N +++ LCK GK + A+ VF E + GL + ++ +L+ CK ++ E
Sbjct: 300 GFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVET 359
Query: 184 FRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDG 243
++ S M + PD+ +S++++ + LD A + + + E GL P++VI+T LI G
Sbjct: 360 EKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQG 419
Query: 244 HCKNGRIDMAGDMK-----------------------------EARKIVDEMCTNGLNPD 274
+C+ G I +A +++ EA K+ +EM L PD
Sbjct: 420 YCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPD 479
Query: 275 KITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLR 334
T TIL+DG CK G+L++A+++ ++M ++ I LD V + L+ GF + G + A+ +
Sbjct: 480 SYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWA 539
Query: 335 EMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHG 394
+M+ + P +Y+++++ C G FR+ EM S P V N+++ G C+ G
Sbjct: 540 DMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSG 599
Query: 395 QLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPED----FDKLQSEK-GLVSDYAC 449
+ L+ M+ G VPD I+YN L+ G + N K++ E+ GLV D
Sbjct: 600 NASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFT 659
Query: 450 YTSLV 454
Y S++
Sbjct: 660 YNSIL 664
Score = 181 bits (460), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 168/345 (48%), Gaps = 31/345 (8%)
Query: 127 PSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRL 186
P + F+ +M + G + A M F+ + GL V + LI G+C+ + L
Sbjct: 373 PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNL 432
Query: 187 KSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCK 246
++ M G DV TY+ +++GLCK L +A+ L +EM ER L P+ T LIDGHCK
Sbjct: 433 RNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCK 492
Query: 247 NGRIDMA-----------------------------GDMKEARKIVDEMCTNGLNPDKIT 277
G + A GD+ A++I +M + + P I+
Sbjct: 493 LGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS 552
Query: 278 YTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREML 337
Y+IL++ C +G L A + EMI + I+ + ++I G+CR G + E L +M+
Sbjct: 553 YSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI 612
Query: 338 KVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSD--GHLPAVETYNALMNGLCKHGQ 395
G PD +Y +I F + + F L+K+M + G +P V TYN++++G C+ Q
Sbjct: 613 SEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQ 672
Query: 396 LKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPEDFDKLQSE 440
+K A ++L M++ GV PD TY ++ G N + ++ E
Sbjct: 673 MKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDE 717
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 201/434 (46%), Gaps = 28/434 (6%)
Query: 3 FRLTLHAYSTMVHFLVAHKMHSQARDLLHLIVSKKGMGSSASLFASIL----------ET 52
F ++ Y+T+++ L H + +A+++ ++ + G+ ++ + S+L ET
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEML-RSGLSPDSTTYRSLLMEACKKGDVVET 359
Query: 53 RGTH--------LPGLV-LDALMIVYVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDR 103
+P LV ++M ++ G LD A+ F +++ LI
Sbjct: 360 EKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQG 419
Query: 104 MMRTNLPTVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHAT 163
R + +V + E+L G + V +N ++H LCK + +A +F+E +R L
Sbjct: 420 YCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPD 479
Query: 164 AVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLH 223
+ + LI+GHCK NL L M+ +R DV TY+ L++G K +D A+ +
Sbjct: 480 SYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWA 539
Query: 224 EMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLD 283
+M + + P + ++ L++ C G + EA ++ DEM + + P + ++
Sbjct: 540 DMVSKEILPTPISYSILVNALCSKGH------LAEAFRVWDEMISKNIKPTVMICNSMIK 593
Query: 284 GFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKV--GL 341
G+C+ G+ ++MI G D +++ LI GF R + +A ++++M + GL
Sbjct: 594 GYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGL 653
Query: 342 KPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANM 401
PD TY ++ FC+ K +L++M G P TY ++NG L A
Sbjct: 654 VPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFR 713
Query: 402 LLDTMLDLGVVPDD 415
+ D ML G PDD
Sbjct: 714 IHDEMLQRGFSPDD 727
Score = 112 bits (280), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 130/275 (47%), Gaps = 26/275 (9%)
Query: 201 TYSALINGLCKENRLDDAELLLHEMCER-GLT----------------PNDVIFTTLIDG 243
+ SA+I+ L + RL DA+ L M R G++ ND +F LI
Sbjct: 115 SLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRT 174
Query: 244 HCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIK 303
+ + A ++EA + + + G L+ + G +E A + +E+ +
Sbjct: 175 YVQ------ARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISR 228
Query: 304 RGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKT 363
G+ ++ +++ C+ GK+ + L ++ + G+ PD TY +I + G +
Sbjct: 229 SGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEE 288
Query: 364 GFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLE 423
F L+ M G P V TYN ++NGLCKHG+ + A + ML G+ PD TY LL
Sbjct: 289 AFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLM 348
Query: 424 GHCKHGNPEDFDKLQSE---KGLVSDYACYTSLVS 455
CK G+ + +K+ S+ + +V D C++S++S
Sbjct: 349 EACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMS 383
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 220 bits (560), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 145/454 (31%), Positives = 231/454 (50%), Gaps = 30/454 (6%)
Query: 7 LHAYSTMVHFLVAHKMHSQARDLLHLIVSKKGMGSSASLFASILE--TRGTHLPGLVLDA 64
L+ Y+ M++ L S A +L ++ K G G S S+L G + V A
Sbjct: 100 LYTYNIMINCLCRRSQLSFALAILGKMM-KLGYGPSIVTLNSLLNGFCHGNRISEAV--A 156
Query: 65 LMIVYVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYLEILDYG 124
L+ V++G+ D + L+ + A L++RM+ G
Sbjct: 157 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK----------------G 200
Query: 125 YSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGF 184
P + + +++ LCK G+ A + ++ K + A V ++T+I+ CK +++D+
Sbjct: 201 CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDAL 260
Query: 185 RLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGH 244
L + M+ G+RPDV+TYS+LI+ LC R DA LL +M ER + PN V F +LID
Sbjct: 261 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAF 320
Query: 245 CKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKR 304
K G+ + EA K+ DEM ++P+ +TY L++GFC L+ A I M+ +
Sbjct: 321 AKEGK------LIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSK 374
Query: 305 GIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTG 364
D V + LI+GFC+ KVV+ + R+M + GL + TYT +I F + D
Sbjct: 375 DCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNA 434
Query: 365 FRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEG 424
+ K+M SDG P + TYN L++GLCK+G+L+ A ++ + + + PD TYNI+ EG
Sbjct: 435 QMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEG 494
Query: 425 HCKHGNPEDFDKL---QSEKGLVSDYACYTSLVS 455
CK G ED L S KG+ D Y +++S
Sbjct: 495 MCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMIS 528
Score = 190 bits (482), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 201/386 (52%), Gaps = 15/386 (3%)
Query: 75 LDDAIQCF-RLLRKHYFRIPARGCRCL--IDRMMRTNLPTVTLGFYLEILDYGYSPSVYV 131
LD+A+ F +++ F + L I +M + +L ++ G +EIL G S ++Y
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDL-VISFGEKMEIL--GVSHNLYT 102
Query: 132 FNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVME 191
+N++++ LC+ ++ A + + K G + V+ N+L+NG C + E L M
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 162
Query: 192 GSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRID 251
G +PD T++ L++GL + N+ +A L+ M +G P+ V + +I+G CK G D
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 222
Query: 252 MAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNV 311
+A ++ +++M + D + Y+ ++D CK ++ AL++ EM +GI D
Sbjct: 223 LALNL------LNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVF 276
Query: 312 AFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEM 371
+++LIS C G+ +A R+L +ML+ + P+ T+ +ID F K G +L EM
Sbjct: 277 TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336
Query: 372 RSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNP 431
P + TYN+L+NG C H +L A + M+ +PD +TYN L+ G CK
Sbjct: 337 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKV 396
Query: 432 EDFDKL---QSEKGLVSDYACYTSLV 454
D +L S +GLV + YT+L+
Sbjct: 397 VDGMELFRDMSRRGLVGNTVTYTTLI 422
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/433 (29%), Positives = 203/433 (46%), Gaps = 28/433 (6%)
Query: 9 AYSTMVHFLVAHKMHSQARDLLHLIVSKKGMGSSASLFASI--LETRGTHLPGLVLDAL- 65
++T+VH L H S+A L+ +V K + A I L RG P L L+ L
Sbjct: 172 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE--PDLALNLLN 229
Query: 66 ----------MIVYVDL-------GFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTN 108
+++Y + +DDA+ F + R LI +
Sbjct: 230 KMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 289
Query: 109 LPTVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFN 168
+ ++L+ +P+V FN L+ KEGK+ +A+ +FDE +R + V++N
Sbjct: 290 RWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYN 349
Query: 169 TLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCER 228
+LING C LDE ++ ++M PDV TY+ LING CK ++ D L +M R
Sbjct: 350 SLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRR 409
Query: 229 GLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKE 288
GL N V +TTLI G + A D A+ + +M ++G++P+ +TY LLDG CK
Sbjct: 410 GLVGNTVTYTTLIHGFFQ------ASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 463
Query: 289 GDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATY 348
G LE A+ + + + K +E D + + G C+ GKV + + + G+KPD Y
Sbjct: 464 GKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAY 523
Query: 349 TMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLD 408
+I FCK G + + L +M+ DG LP TYN L+ + G + L+ M
Sbjct: 524 NTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRS 583
Query: 409 LGVVPDDITYNIL 421
D TY ++
Sbjct: 584 CRFAGDASTYGLV 596
Score = 155 bits (393), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 179/392 (45%), Gaps = 40/392 (10%)
Query: 105 MRTNLPTVTL-GFYLEILDY-GYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHA 162
+R P+ L G Y L Y GY + N L+H K+ +A +F E K
Sbjct: 10 LRKASPSFCLRGIYFSGLSYDGYREKLSR-NALLHL-----KLDEAVDLFGEMVKSRPFP 63
Query: 163 TAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLL 222
+ V F+ L++ K K D ME G+ ++YTY+ +IN LC+ ++L A +L
Sbjct: 64 SIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAIL 123
Query: 223 HEMCERGLTPNDVIFTTLIDGHCKNGRIDMA----------------------------- 253
+M + G P+ V +L++G C RI A
Sbjct: 124 GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 183
Query: 254 GDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAF 313
EA +V+ M G PD +TY +++G CK G+ + AL++ +M K IE D V +
Sbjct: 184 NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIY 243
Query: 314 TALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRS 373
+ +I C+ V +A + EM G++PD TY+ +I C C G RLL +M
Sbjct: 244 STVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLE 303
Query: 374 DGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPED 433
P V T+N+L++ K G+L A L D M+ + P+ +TYN L+ G C H ++
Sbjct: 304 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 363
Query: 434 FDK---LQSEKGLVSDYACYTSLVSKSSKYRQ 462
+ L K + D Y +L++ K ++
Sbjct: 364 AQQIFTLMVSKDCLPDVVTYNTLINGFCKAKK 395
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 218 bits (555), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 132/395 (33%), Positives = 207/395 (52%), Gaps = 25/395 (6%)
Query: 64 ALMIVYVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYLEILDY 123
AL+ V++G+ D L+ + A L+D+M++
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR---------------- 217
Query: 124 GYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEG 183
G P + + +++ LCK G I A + + K + A V +NT+I+G CK K++D+
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 277
Query: 184 FRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDG 243
L + M+ G+RPDV+TYS+LI+ LC R DA LL +M ER + PN V F+ LID
Sbjct: 278 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 337
Query: 244 HCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIK 303
K G+ + EA K+ DEM ++PD TY+ L++GFC L+ A + + MI
Sbjct: 338 FVKEGK------LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 391
Query: 304 RGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKT 363
+ + V ++ LI GFC+ +V E + REM + GL + TYT +I F + D
Sbjct: 392 KDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 451
Query: 364 GFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLE 423
+ K+M S G P + TYN L++GLCK+G+L A ++ + + + PD TYNI++E
Sbjct: 452 AQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIE 511
Query: 424 GHCKHGNPEDFDKL---QSEKGLVSDYACYTSLVS 455
G CK G ED +L S KG+ + Y +++S
Sbjct: 512 GMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMIS 546
Score = 189 bits (480), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 210/432 (48%), Gaps = 23/432 (5%)
Query: 9 AYSTMVHFLVAHKMHSQARDLLHLIVSKKGMGSSASLFASILETRGTHLPGLVLDALMIV 68
++T++H L H S+A L+ +V + G L T GT + GL
Sbjct: 190 TFTTLIHGLFLHNKASEAVALVDQMVQR---GCQPDLV-----TYGTVVNGLC------- 234
Query: 69 YVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYLEILDYGYSPS 128
G +D A+ + + K +ID + + L + E+ + G P
Sbjct: 235 --KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292
Query: 129 VYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKS 188
V+ ++ L+ LC G+ DA + + +R ++ V+F+ LI+ K L E +L
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352
Query: 189 VMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNG 248
M + PD++TYS+LING C +RLD+A+ + M + PN V ++TLI G CK
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAK 412
Query: 249 RIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIEL 308
R++ E ++ EM GL + +TYT L+ GF + D ++A + K+M+ G+
Sbjct: 413 RVE------EGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHP 466
Query: 309 DNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLL 368
+ + + L+ G C+ GK+ +A + + + ++PD TY ++I+ CK G + G+ L
Sbjct: 467 NILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELF 526
Query: 369 KEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKH 428
+ G P V YN +++G C+ G + A+ LL M + G +P+ TYN L+ +
Sbjct: 527 CNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRD 586
Query: 429 GNPEDFDKLQSE 440
G+ E +L E
Sbjct: 587 GDREASAELIKE 598
Score = 188 bits (477), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 188/347 (54%), Gaps = 11/347 (3%)
Query: 111 TVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTL 170
++LG ++ L G S +Y +++ ++ C+ ++ A V + K G V+ ++L
Sbjct: 102 VISLGEQMQTL--GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSL 159
Query: 171 INGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGL 230
+NG+C +K + + L M G +PD +T++ LI+GL N+ +A L+ +M +RG
Sbjct: 160 LNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGC 219
Query: 231 TPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGD 290
P+ V + T+++G CK G ID+ A ++ +M + D + Y ++DG CK
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDL------ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKH 273
Query: 291 LESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTM 350
++ AL++ EM +GI D +++LIS C G+ +A R+L +M++ + P+ T++
Sbjct: 274 MDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 333
Query: 351 VIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLG 410
+ID F K G +L EM P + TY++L+NG C H +L A + + M+
Sbjct: 334 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 393
Query: 411 VVPDDITYNILLEGHCKHGNPEDFDKL---QSEKGLVSDYACYTSLV 454
P+ +TY+ L++G CK E+ +L S++GLV + YT+L+
Sbjct: 394 CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Score = 181 bits (458), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 175/359 (48%), Gaps = 29/359 (8%)
Query: 100 LIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRG 159
I+ R + ++ L +++ GY P + + L++ C +I DA + D+ + G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 160 LHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAE 219
+F TLI+G E L M G +PD+ TY ++NGLCK +D A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 220 LLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMA-------------------------- 253
LL +M + + + VI+ T+IDG CK +D A
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 254 ---GDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDN 310
G +A +++ +M +NP+ +T++ L+D F KEG L A + EMIKR I+ D
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363
Query: 311 VAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKE 370
+++LI+GFC ++ EA+ M M+ P+ TY+ +I FCK + G L +E
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFRE 423
Query: 371 MRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHG 429
M G + TY L++G + NA M+ M+ +GV P+ +TYNILL+G CK+G
Sbjct: 424 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482
Score = 175 bits (444), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 97/303 (32%), Positives = 158/303 (52%), Gaps = 6/303 (1%)
Query: 119 EILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAK 178
++++ +P+V F+ L+ KEGK+ +A+ ++DE KR + ++++LING C
Sbjct: 318 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 377
Query: 179 NLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFT 238
LDE + +M P+V TYS LI G CK R+++ L EM +RGL N V +T
Sbjct: 378 RLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYT 437
Query: 239 TLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIR 298
TLI G + A D A+ + +M + G++P+ +TY ILLDG CK G L A+ +
Sbjct: 438 TLIHGFFQ------ARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF 491
Query: 299 KEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKN 358
+ + + +E D + +I G C+ GKV + + + G+ P+ Y +I FC+
Sbjct: 492 EYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRK 551
Query: 359 GDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITY 418
G + LLK+M+ DG LP TYN L+ + G + + L+ M G D T
Sbjct: 552 GSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI 611
Query: 419 NIL 421
++
Sbjct: 612 GLV 614
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 166/332 (50%), Gaps = 9/332 (2%)
Query: 127 PSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRL 186
PS+ FN L+ + K K + + ++ G+ +++ IN C+ L +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 187 KSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCK 246
+ M G PD+ T S+L+NG C R+ DA L+ +M E G P+ FTTLI G
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHG--- 197
Query: 247 NGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGI 306
+ + EA +VD+M G PD +TY +++G CK GD++ AL + K+M K I
Sbjct: 198 ---LFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKI 254
Query: 307 ELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFR 366
E D V + +I G C+ + +A + EM G++PD TY+ +I C C G R
Sbjct: 255 EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 314
Query: 367 LLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHC 426
LL +M P V T++AL++ K G+L A L D M+ + PD TY+ L+ G C
Sbjct: 315 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 374
Query: 427 KHGNPEDFDKLQSEKGLVSDYACYTSLVSKSS 458
H + D+ + L+ C+ ++V+ S+
Sbjct: 375 MH---DRLDEAKHMFELMISKDCFPNVVTYST 403
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 167/325 (51%), Gaps = 9/325 (2%)
Query: 134 VLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGS 193
+L ++L K+ DA +F + K + V FN L++ K + L M+
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 194 GMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMA 253
G+ D+YTYS IN C+ ++L A +L +M + G P+ V ++L++G+C + RI
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRI--- 169
Query: 254 GDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAF 313
+A +VD+M G PD T+T L+ G A+ + +M++RG + D V +
Sbjct: 170 ---SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 314 TALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRS 373
+++G C+ G + A +L++M K ++ D Y +ID CK L EM +
Sbjct: 227 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDN 286
Query: 374 DGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPED 433
G P V TY++L++ LC +G+ +A+ LL M++ + P+ +T++ L++ K G +
Sbjct: 287 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 346
Query: 434 FDKLQSE---KGLVSDYACYTSLVS 455
+KL E + + D Y+SL++
Sbjct: 347 AEKLYDEMIKRSIDPDIFTYSSLIN 371
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 216 bits (549), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 138/438 (31%), Positives = 212/438 (48%), Gaps = 44/438 (10%)
Query: 63 DALMIVYVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLP------------ 110
+A+M V VD G+ D A + + +R + +T+ P
Sbjct: 115 NAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSS 174
Query: 111 -----------TVTLGFYLE------------ILDYGYSPSVYVFNVLMHKLCKEGKIKD 147
TV GFY E +L G S + FN L+ LCK+G +K+
Sbjct: 175 QGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKE 234
Query: 148 AQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALIN 207
+ + D+ KRG+ ++N I G C+ LD R+ + G +PDV TY+ LI
Sbjct: 235 CEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIY 294
Query: 208 GLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMC 267
GLCK ++ +AE+ L +M GL P+ + TLI G+CK G + +A +IV +
Sbjct: 295 GLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLA------ERIVGDAV 348
Query: 268 TNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVV 327
NG PD+ TY L+DG C EG+ AL + E + +GI+ + + + LI G G ++
Sbjct: 349 FNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMIL 408
Query: 328 EAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALM 387
EA ++ EM + GL P+ T+ ++++ CK G L+K M S G+ P + T+N L+
Sbjct: 409 EAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468
Query: 388 NGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPEDF---DKLQSEKGLV 444
+G +++NA +LD MLD GV PD TYN LL G CK ED K EKG
Sbjct: 469 HGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCA 528
Query: 445 SDYACYTSLVSKSSKYRQ 462
+ + L+ +YR+
Sbjct: 529 PNLFTFNILLESLCRYRK 546
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 162/300 (54%), Gaps = 7/300 (2%)
Query: 119 EILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAK 178
E+ + G P V FN+L++ LCK G + DA + +G +FN LI+G+
Sbjct: 416 EMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQL 475
Query: 179 NLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFT 238
++ + VM +G+ PDVYTY++L+NGLCK ++ +D M E+G PN F
Sbjct: 476 KMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFN 535
Query: 239 TLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIR 298
L++ C+ ++D EA +++EM +NPD +T+ L+DGFCK GDL+ A +
Sbjct: 536 ILLESLCRYRKLD------EALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLF 589
Query: 299 KEMIKR-GIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCK 357
++M + + + +I F V AE++ +EM+ L PD TY +++D FCK
Sbjct: 590 RKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCK 649
Query: 358 NGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDIT 417
G+ G++ L EM +G +P++ T ++N LC ++ A ++ M+ G+VP+ +
Sbjct: 650 TGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVN 709
Score = 173 bits (439), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 172/339 (50%), Gaps = 10/339 (2%)
Query: 120 ILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKN 179
+++ G P V +N L++ LCK K ++A++ + GL + ++NTLI G+CK
Sbjct: 277 LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGM 336
Query: 180 LDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTT 239
+ R+ +G PD +TY +LI+GLC E + A L +E +G+ PN +++ T
Sbjct: 337 VQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNT 396
Query: 240 LIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRK 299
LI G G I EA ++ +EM GL P+ T+ IL++G CK G + A + K
Sbjct: 397 LIKGLSNQGMI------LEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVK 450
Query: 300 EMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNG 359
MI +G D F LI G+ K+ A +L ML G+ PD TY +++ CK
Sbjct: 451 VMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTS 510
Query: 360 DTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYN 419
+ K M G P + T+N L+ LC++ +L A LL+ M + V PD +T+
Sbjct: 511 KFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFG 570
Query: 420 ILLEGHCKHGNPED----FDKLQSEKGLVSDYACYTSLV 454
L++G CK+G+ + F K++ + S Y ++
Sbjct: 571 TLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIII 609
Score = 172 bits (435), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 98/308 (31%), Positives = 158/308 (51%), Gaps = 7/308 (2%)
Query: 124 GYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEG 183
G+ P + + L+ LC EG+ A +F+E +G+ + +NTLI G + E
Sbjct: 351 GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEA 410
Query: 184 FRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDG 243
+L + M G+ P+V T++ L+NGLCK + DA+ L+ M +G P+ F LI G
Sbjct: 411 AQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470
Query: 244 HCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIK 303
+ + M+ A +I+D M NG++PD TY LL+G CK E ++ K M++
Sbjct: 471 YSTQLK------MENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVE 524
Query: 304 RGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKT 363
+G + F L+ CR K+ EA +L EM + PD T+ +ID FCKNGD
Sbjct: 525 KGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDG 584
Query: 364 GFRLLKEMRSDGHLPA-VETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILL 422
+ L ++M + + TYN +++ + + A L M+D + PD TY +++
Sbjct: 585 AYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMV 644
Query: 423 EGHCKHGN 430
+G CK GN
Sbjct: 645 DGFCKTGN 652
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 134/268 (50%), Gaps = 14/268 (5%)
Query: 120 ILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKN 179
++ GY P ++ FN+L+H + K+++A + D G+ ++N+L+NG CK
Sbjct: 452 MISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSK 511
Query: 180 LDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTT 239
++ M G P+++T++ L+ LC+ +LD+A LL EM + + P+ V F T
Sbjct: 512 FEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGT 571
Query: 240 LIDGHCKNGRIDMA----GDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESAL 295
LIDG CKNG +D A M+EA K+ + TY I++ F ++ ++ A
Sbjct: 572 LIDGFCKNGDLDGAYTLFRKMEEAYKV---------SSSTPTYNIIIHAFTEKLNVTMAE 622
Query: 296 DIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCF 355
+ +EM+ R + D + ++ GFC+ G V + L EM++ G P T VI+C
Sbjct: 623 KLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCL 682
Query: 356 CKNGDTKTGFRLLKEMRSDGHLP-AVET 382
C ++ M G +P AV T
Sbjct: 683 CVEDRVYEAAGIIHRMVQKGLVPEAVNT 710
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 160/337 (47%), Gaps = 10/337 (2%)
Query: 122 DYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKR-GLHATAVSFNTLINGHCKAKNL 180
+ G+ ++ + ++ KL GK + + V + + G H + + + + +
Sbjct: 33 EVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKV 92
Query: 181 DEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTL 240
E + M+ P V++Y+A+++ L D A + M +RG+TP+ FT
Sbjct: 93 QEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIR 152
Query: 241 IDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKE 300
+ CK R A ++++ M + G + + Y ++ GF +E ++ +
Sbjct: 153 MKSFCKTSRP------HAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGK 206
Query: 301 MIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGD 360
M+ G+ L F L+ C+ G V E E++L +++K G+ P+ TY + I C+ G+
Sbjct: 207 MLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGE 266
Query: 361 TKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNI 420
R++ + G P V TYN L+ GLCK+ + + A + L M++ G+ PD TYN
Sbjct: 267 LDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNT 326
Query: 421 LLEGHCKHGNPEDFDKLQSE---KGLVSDYACYTSLV 454
L+ G+CK G + +++ + G V D Y SL+
Sbjct: 327 LIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLI 363
Score = 105 bits (262), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 117/238 (49%), Gaps = 15/238 (6%)
Query: 226 CERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGF 285
CE + + I + L+D +G +A K+ M G+ PD ++TI + F
Sbjct: 107 CEPTVFSYNAIMSVLVD----------SGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSF 156
Query: 286 CKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDD 345
CK +AL + M +G E++ VA+ ++ GF E + +ML G+
Sbjct: 157 CKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCL 216
Query: 346 ATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDT 405
+T+ ++ CK GD K +LL ++ G LP + TYN + GLC+ G+L A ++
Sbjct: 217 STFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGC 276
Query: 406 MLDLGVVPDDITYNILLEGHCKHGNPEDFD----KLQSEKGLVSDYACYTSLVSKSSK 459
+++ G PD ITYN L+ G CK+ ++ + K+ +E GL D Y +L++ K
Sbjct: 277 LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNE-GLEPDSYTYNTLIAGYCK 333
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 214 bits (546), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 130/462 (28%), Positives = 240/462 (51%), Gaps = 14/462 (3%)
Query: 5 LTLHAYSTMVHFLVAHKMHSQARDLLHLIVSKKGMGSSASLFASILETRGTHLPGLVLDA 64
++L ++H L K +S+ R L V S+F +I + ++ D
Sbjct: 99 VSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADM 158
Query: 65 LMIVYVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYLEILDYG 124
L++ Y + + + F+ + +++ A C+ L+ +++ N Y E++
Sbjct: 159 LVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRK 218
Query: 125 YSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGF 184
P+V+ FNV+++ LCK GK+ A+ V ++ G VS+NTLI+G+CK + +
Sbjct: 219 IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY 278
Query: 185 RLKSV---MEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLI 241
+ +V M + + P++ T++ LI+G K++ L + + EM ++ + PN + + +LI
Sbjct: 279 KADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLI 338
Query: 242 DGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEM 301
+G C G+I A M+ D+M + G+ P+ ITY L++GFCK L+ ALD+ +
Sbjct: 339 NGLCNGGKISEAISMR------DKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSV 392
Query: 302 IKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDT 361
+G + LI +C+ GK+ + + EM + G+ PD TY +I C+NG+
Sbjct: 393 KGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNI 452
Query: 362 KTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNIL 421
+ +L ++ S G LP + T++ LM G C+ G+ + A MLL M +G+ P +TYNI+
Sbjct: 453 EAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIV 511
Query: 422 LEGHCKHGNPEDF----DKLQSEKGLVSDYACYTSLVSKSSK 459
++G+CK GN + +++ E+ L + A Y L+ S+
Sbjct: 512 MKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQ 553
Score = 199 bits (505), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 179/318 (56%), Gaps = 8/318 (2%)
Query: 119 EILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAK 178
E+++ SP++ FN+L+ K+ + + VF E + + +S+N+LING C
Sbjct: 286 EMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGG 345
Query: 179 NLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFT 238
+ E ++ M +G++P++ TY+ALING CK + L +A + + +G P ++
Sbjct: 346 KISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYN 405
Query: 239 TLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIR 298
LID +CK G+ID +KE EM G+ PD TY L+ G C+ G++E+A +
Sbjct: 406 MLIDAYCKLGKIDDGFALKE------EMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLF 459
Query: 299 KEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKN 358
++ +G+ D V F L+ G+CR G+ +A +L+EM K+GLKP TY +V+ +CK
Sbjct: 460 DQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKE 518
Query: 359 GDTKTGFRLLKEMRSDGHLPA-VETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDIT 417
G+ K + +M + L V +YN L+ G + G+L++ANMLL+ ML+ G+VP+ IT
Sbjct: 519 GNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRIT 578
Query: 418 YNILLEGHCKHGNPEDFD 435
Y I+ E G D +
Sbjct: 579 YEIVKEEMVDQGFVPDIE 596
Score = 152 bits (385), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 167/328 (50%), Gaps = 33/328 (10%)
Query: 100 LIDRMMRT-NLPTVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKR 158
LID + NLP ++ + E+LD P+V +N L++ LC GKI +A + D+
Sbjct: 302 LIDGFWKDDNLPG-SMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSA 360
Query: 159 GLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDA 218
G+ +++N LING CK L E + ++G G P Y+ LI+ CK ++DD
Sbjct: 361 GVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDG 420
Query: 219 ELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITY 278
L EM G+ P+ + LI G C+NG I+ A+K+ D++ + GL PD +T+
Sbjct: 421 FALKEEMEREGIVPDVGTYNCLIAGLCRNGNIE------AAKKLFDQLTSKGL-PDLVTF 473
Query: 279 TILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLK 338
IL++G+C++G+ A + KEM K G++ ++ + ++ G+C+ G + A M +M K
Sbjct: 474 HILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEK 533
Query: 339 V-GLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLK 397
L+ + A+Y +++ + + G + LL EM G +P TY
Sbjct: 534 ERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY-------------- 579
Query: 398 NANMLLDTMLDLGVVPDDITYNILLEGH 425
++ + M+D G VPD +EGH
Sbjct: 580 --EIVKEEMVDQGFVPD-------IEGH 598
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 144/455 (31%), Positives = 229/455 (50%), Gaps = 30/455 (6%)
Query: 6 TLHAYSTMVHFLVAHKMHSQARDLLHLIVSKKGMGSSASLFASILE--TRGTHLPGLVLD 63
L+ Y+ +++ S A LL ++ K G S +S+L G + V
Sbjct: 119 NLYTYNILINCFCRRSQISLALALLGKMM-KLGYEPSIVTLSSLLNGYCHGKRISDAV-- 175
Query: 64 ALMIVYVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYLEILDY 123
AL+ V++G+ D I L+ + A L+DRM++
Sbjct: 176 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR---------------- 219
Query: 124 GYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEG 183
G P++ + V+++ LCK G I A + ++ + A V ++T+I+ CK ++ D+
Sbjct: 220 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 279
Query: 184 FRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDG 243
L + ME G+RP+V TYS+LI+ LC R DA LL +M ER + PN V F LID
Sbjct: 280 LNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDA 339
Query: 244 HCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIK 303
K G+ + EA K+ DEM ++PD TY+ L++GFC L+ A + + MI
Sbjct: 340 FVKEGK------LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 393
Query: 304 RGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKT 363
+ + V + LI+GFC+ ++ E + REM + GL + TYT +I F + D
Sbjct: 394 KDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 453
Query: 364 GFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLE 423
+ K+M SDG P + TYN L++GLCK+G+L+ A ++ + + + P TYNI++E
Sbjct: 454 AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 513
Query: 424 GHCKHGNPEDFDKL---QSEKGLVSDYACYTSLVS 455
G CK G ED L S KG+ D Y +++S
Sbjct: 514 GMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMIS 548
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 192/357 (53%), Gaps = 12/357 (3%)
Query: 101 IDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGL 160
I +M + +L ++LG ++ L G S ++Y +N+L++ C+ +I A + + K G
Sbjct: 95 IAKMKKFDL-VISLGEKMQRL--GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGY 151
Query: 161 HATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAEL 220
+ V+ ++L+NG+C K + + L M G RPD T++ LI+GL N+ +A
Sbjct: 152 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 211
Query: 221 LLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTI 280
L+ M +RG PN V + +++G CK G ID+A ++ +++M + + + Y+
Sbjct: 212 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL------LNKMEAAKIEANVVIYST 265
Query: 281 LLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVG 340
++D CK + AL++ EM +G+ + + +++LIS C + +A R+L +M++
Sbjct: 266 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERK 325
Query: 341 LKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNAN 400
+ P+ T+ +ID F K G +L EM P + TY++L+NG C H +L A
Sbjct: 326 INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 385
Query: 401 MLLDTMLDLGVVPDDITYNILLEGHCKHGNPEDFDKL---QSEKGLVSDYACYTSLV 454
+ + M+ P+ +TYN L+ G CK ++ +L S++GLV + YT+L+
Sbjct: 386 HMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 196/415 (47%), Gaps = 23/415 (5%)
Query: 3 FRLTLHAYSTMVHFLVAHKMHSQARDLLHLIVSKKGMGSSASLFASILETRGTHLPGLVL 62
+R ++T++H L H S+A L+ +V + G +L G+V+
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR---GCQPNLVTY----------GVVV 232
Query: 63 DALMIVYVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYLEILD 122
+ L G +D A + +ID + + L + E+ +
Sbjct: 233 NGL----CKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 288
Query: 123 YGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDE 182
G P+V ++ L+ LC + DA + + +R ++ V+FN LI+ K L E
Sbjct: 289 KGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVE 348
Query: 183 GFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLID 242
+L M + PD++TYS+LING C +RLD+A+ + M + PN V + TLI+
Sbjct: 349 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIN 408
Query: 243 GHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMI 302
G CK RID E ++ EM GL + +TYT L+ GF + D ++A + K+M+
Sbjct: 409 GFCKAKRID------EGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 462
Query: 303 KRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTK 362
G+ + + + L+ G C+ GK+ +A + + + ++P TY ++I+ CK G +
Sbjct: 463 SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 522
Query: 363 TGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDIT 417
G+ L + G P V YN +++G C+ G + A+ L M + G +PD T
Sbjct: 523 DGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 145 bits (367), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 159/315 (50%), Gaps = 9/315 (2%)
Query: 144 KIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYS 203
K+ DA +F K + FN L++ K K D L M+ G+ ++YTY+
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 204 ALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIV 263
LIN C+ +++ A LL +M + G P+ V ++L++G+C RI +A +V
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI------SDAVALV 178
Query: 264 DEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRG 323
D+M G PD IT+T L+ G A+ + M++RG + + V + +++G C+
Sbjct: 179 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
Query: 324 GKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETY 383
G + A +L +M ++ + Y+ VID CK L EM + G P V TY
Sbjct: 239 GDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 298
Query: 384 NALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPEDFDKLQSE--- 440
++L++ LC + + +A+ LL M++ + P+ +T+N L++ K G + +KL E
Sbjct: 299 SSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIK 358
Query: 441 KGLVSDYACYTSLVS 455
+ + D Y+SL++
Sbjct: 359 RSIDPDIFTYSSLIN 373
Score = 102 bits (254), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 130/261 (49%), Gaps = 10/261 (3%)
Query: 205 LINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVD 264
L NGL +LDDA L M + P+ F L+ K + D+ + E
Sbjct: 57 LRNGL-HSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGE------ 109
Query: 265 EMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGG 324
+M G++ + TY IL++ FC+ + AL + +M+K G E V ++L++G+C G
Sbjct: 110 KMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK 169
Query: 325 KVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYN 384
++ +A ++ +M+++G +PD T+T +I + L+ M G P + TY
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 229
Query: 385 ALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPEDFDKLQSE---K 441
++NGLCK G + A LL+ M + + + Y+ +++ CK+ + +D L +E K
Sbjct: 230 VVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289
Query: 442 GLVSDYACYTSLVSKSSKYRQ 462
G+ + Y+SL+S Y +
Sbjct: 290 GVRPNVITYSSLISCLCNYER 310
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 213 bits (543), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 127/416 (30%), Positives = 216/416 (51%), Gaps = 9/416 (2%)
Query: 15 HFLVAHKMHSQARDLLHLIVSKKGMGSSASLFASILET-RGTHLPGLVLDALMIVYVDLG 73
H LV +M+ AR +L + G S+ +F +++ T R + V D L+ VY+ G
Sbjct: 80 HILVRARMYDPARHILKELSLMSG--KSSFVFGALMTTYRLCNSNPSVYDILIRVYLREG 137
Query: 74 FLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFN 133
+ D+++ FRL+ + F C ++ ++++ F E+L P V FN
Sbjct: 138 MIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFN 197
Query: 134 VLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGS 193
+L++ LC EG + + + + K G T V++NT+++ +CK L M+
Sbjct: 198 ILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSK 257
Query: 194 GMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMA 253
G+ DV TY+ LI+ LC+ NR+ LLL +M +R + PN+V + TLI+G G++ +A
Sbjct: 258 GVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIA 317
Query: 254 GDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAF 313
++++EM + GL+P+ +T+ L+DG EG+ + AL + M +G+ V++
Sbjct: 318 S------QLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSY 371
Query: 314 TALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRS 373
L+ G C+ + A M + G+ TYT +ID CKNG LL EM
Sbjct: 372 GVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSK 431
Query: 374 DGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHG 429
DG P + TY+AL+NG CK G+ K A ++ + +G+ P+ I Y+ L+ C+ G
Sbjct: 432 DGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG 487
Score = 198 bits (503), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 118/342 (34%), Positives = 183/342 (53%), Gaps = 13/342 (3%)
Query: 119 EILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAK 178
E+L +G SP+ FN L+ EG K+A +F +GL + VS+ L++G CK
Sbjct: 323 EMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNA 382
Query: 179 NLD--EGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVI 236
D GF ++ M+ +G+ TY+ +I+GLCK LD+A +LL+EM + G+ P+ V
Sbjct: 383 EFDLARGFYMR--MKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVT 440
Query: 237 FTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALD 296
++ LI+G CK GR K A++IV + GL+P+ I Y+ L+ C+ G L+ A+
Sbjct: 441 YSALINGFCKVGRF------KTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIR 494
Query: 297 IRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFC 356
I + MI G D+ F L++ C+ GKV EAE +R M G+ P+ ++ +I+ +
Sbjct: 495 IYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYG 554
Query: 357 KNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDI 416
+G+ F + EM GH P TY +L+ GLCK G L+ A L ++ + D +
Sbjct: 555 NSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTV 614
Query: 417 TYNILLEGHCKHGNPEDFDKLQSE---KGLVSDYACYTSLVS 455
YN LL CK GN L E + ++ D YTSL+S
Sbjct: 615 MYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLIS 656
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 168/369 (45%), Gaps = 14/369 (3%)
Query: 82 FRLLRKHYFRIPARGC-------RCLIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNV 134
F L R Y R+ G +ID + + + E+ G P + ++
Sbjct: 384 FDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSA 443
Query: 135 LMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSG 194
L++ CK G+ K A+ + + GL + ++TLI C+ L E R+ M G
Sbjct: 444 LINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG 503
Query: 195 MRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAG 254
D +T++ L+ LCK ++ +AE + M G+ PN V F LI+G+ +G
Sbjct: 504 HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGN------SG 557
Query: 255 DMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFT 314
+ +A + DEM G +P TY LL G CK G L A K + +D V +
Sbjct: 558 EGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYN 617
Query: 315 ALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSD 374
L++ C+ G + +A + EM++ + PD TYT +I C+ G T KE +
Sbjct: 618 TLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEAR 677
Query: 375 GH-LPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPED 433
G+ LP Y ++G+ K GQ K + M +LG PD +T N +++G+ + G E
Sbjct: 678 GNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEK 737
Query: 434 FDKLQSEKG 442
+ L E G
Sbjct: 738 TNDLLPEMG 746
Score = 149 bits (375), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 167/355 (47%), Gaps = 29/355 (8%)
Query: 99 CLIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKR 158
C +D M + + F ++ + G++P + N ++ + GKI+ + E G +
Sbjct: 689 CFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQ 748
Query: 159 GLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDA 218
++N L++G+ K K++ F L + +G+ PD T +L+ G+C+ N L+
Sbjct: 749 NGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIG 808
Query: 219 ELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDM---------------------- 256
+L RG+ + F LI C NG I+ A D+
Sbjct: 809 LKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSV 868
Query: 257 -------KEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELD 309
+E+R ++ EM G++P+ Y L++G C+ GD+++A +++EMI I
Sbjct: 869 LNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPP 928
Query: 310 NVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLK 369
NVA +A++ + GK EA +LR MLK+ L P A++T ++ CKNG+ L
Sbjct: 929 NVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRV 988
Query: 370 EMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEG 424
M + G + +YN L+ GLC G + A L + M G + + TY L+ G
Sbjct: 989 VMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1043
Score = 135 bits (340), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 173/395 (43%), Gaps = 45/395 (11%)
Query: 100 LIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRG 159
L+ M ++ + + E++ P Y + L+ LC++GK A + E RG
Sbjct: 619 LLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARG 678
Query: 160 -LHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDA 218
+ V + ++G KA G + M+ G PD+ T +A+I+G + +++
Sbjct: 679 NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKT 738
Query: 219 ELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITY 278
LL EM + PN + L+ G+ K R D++ R I+ NG+ PDK+T
Sbjct: 739 NDLLPEMGNQNGGPNLTTYNILLHGYSK--RKDVSTSFLLYRSII----LNGILPDKLTC 792
Query: 279 TILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKV------------ 326
L+ G C+ LE L I K I RG+E+D F LIS C G++
Sbjct: 793 HSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTS 852
Query: 327 -----------------------VEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKT 363
E+ +L EM K G+ P+ Y +I+ C+ GD KT
Sbjct: 853 LGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKT 912
Query: 364 GFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLE 423
F + +EM + P +A++ L K G+ A +LL ML + +VP ++ L+
Sbjct: 913 AFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMH 972
Query: 424 GHCKHGNPEDFDKLQ---SEKGLVSDYACYTSLVS 455
CK+GN + +L+ S GL D Y L++
Sbjct: 973 LCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLIT 1007
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 120/261 (45%), Gaps = 11/261 (4%)
Query: 197 PDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDM 256
P VY LI +E + D+ + M G P+ ++ G + +G+
Sbjct: 123 PSVY--DILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAIL------GSVVKSGED 174
Query: 257 KEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTAL 316
+ EM + PD T+ IL++ C EG E + + ++M K G V + +
Sbjct: 175 VSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTV 234
Query: 317 ISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGH 376
+ +C+ G+ A +L M G+ D TY M+I C++ G+ LL++MR
Sbjct: 235 LHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMI 294
Query: 377 LPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPEDFDK 436
P TYN L+NG G++ A+ LL+ ML G+ P+ +T+N L++GH GN ++ K
Sbjct: 295 HPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALK 354
Query: 437 ---LQSEKGLVSDYACYTSLV 454
+ KGL Y L+
Sbjct: 355 MFYMMEAKGLTPSEVSYGVLL 375
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 211 bits (536), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 118/368 (32%), Positives = 198/368 (53%), Gaps = 11/368 (2%)
Query: 92 IPARGCRC--LIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQ 149
IP C C L++ R + ++ L F +++ G+ PS+ F L++ C+ ++ DA
Sbjct: 112 IPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDAL 171
Query: 150 MVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGL 209
+FD+ G V +NT+I+G CK+K +D L + ME G+ PDV TY++LI+GL
Sbjct: 172 YMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGL 231
Query: 210 CKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTN 269
C R DA ++ M +R + P+ F LID K GR+ EA + +EM
Sbjct: 232 CSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRV------SEAEEFYEEMIRR 285
Query: 270 GLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEA 329
L+PD +TY++L+ G C L+ A ++ M+ +G D V ++ LI+G+C+ KV
Sbjct: 286 SLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHG 345
Query: 330 ERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNG 389
++ EM + G+ + TYT++I +C+ G + + M G P + TYN L++G
Sbjct: 346 MKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHG 405
Query: 390 LCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPEDFDKLQSE---KGLVSD 446
LC +G+++ A ++L M G+ D +TYNI++ G CK G D + +GL+ D
Sbjct: 406 LCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPD 465
Query: 447 YACYTSLV 454
YT+++
Sbjct: 466 IWTYTTMM 473
Score = 167 bits (423), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 160/335 (47%), Gaps = 29/335 (8%)
Query: 127 PSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRL 186
PS+ F+ L+ + K K ++++ G+ + N L+N C+ L
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 187 KSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCK 246
M G P + T+ +L+NG C+ +R+ DA + +M G PN VI+ T+IDG CK
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 247 NGRIDMA-----------------------------GDMKEARKIVDEMCTNGLNPDKIT 277
+ ++D A G +A ++V M + PD T
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 278 YTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREML 337
+ L+D KEG + A + +EMI+R ++ D V ++ LI G C ++ EAE M M+
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 338 KVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLK 397
G PD TY+++I+ +CK+ + G +L EM G + TY L+ G C+ G+L
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378
Query: 398 NANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPE 432
A + M+ GV P+ ITYN+LL G C +G E
Sbjct: 379 VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIE 413
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 149/296 (50%), Gaps = 9/296 (3%)
Query: 163 TAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLL 222
+ F+ L++ K K D L M+ G+ ++ T + L+N C+ ++L A L
Sbjct: 80 SIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFL 139
Query: 223 HEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILL 282
+M + G P+ V F +L++G C+ R+ +A + D+M G P+ + Y ++
Sbjct: 140 GKMIKLGHEPSIVTFGSLLNGFCRGDRV------YDALYMFDQMVGMGYKPNVVIYNTII 193
Query: 283 DGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLK 342
DG CK +++ALD+ M K GI D V + +LISG C G+ +A RM+ M K +
Sbjct: 194 DGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIY 253
Query: 343 PDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANML 402
PD T+ +ID K G +EM P + TY+ L+ GLC + +L A +
Sbjct: 254 PDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEM 313
Query: 403 LDTMLDLGVVPDDITYNILLEGHCKHGNPEDFDKL---QSEKGLVSDYACYTSLVS 455
M+ G PD +TY+IL+ G+CK E KL S++G+V + YT L+
Sbjct: 314 FGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQ 369
Score = 82.8 bits (203), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 66/111 (59%)
Query: 124 GYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEG 183
G P++ +NVL+H LC GKI+ A ++ + K G+ A V++N +I G CKA + +
Sbjct: 391 GVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADA 450
Query: 184 FRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPND 234
+ + + G+ PD++TY+ ++ GL K+ +A+ L +M E G+ PN+
Sbjct: 451 WDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
Score = 82.4 bits (202), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 3/190 (1%)
Query: 273 PDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERM 332
P ++ LL K + + + ++M GI + L++ FCR ++ A
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 333 LREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCK 392
L +M+K+G +P T+ +++ FC+ + +M G+ P V YN +++GLCK
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 393 HGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPEDFDKLQS---EKGLVSDYAC 449
Q+ NA LL+ M G+ PD +TYN L+ G C G D ++ S ++ + D
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 450 YTSLVSKSSK 459
+ +L+ K
Sbjct: 259 FNALIDACVK 268
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 82/162 (50%), Gaps = 6/162 (3%)
Query: 114 LGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLING 173
+ + E+ G + + +L+ C+ GK+ A+ +F G+H +++N L++G
Sbjct: 346 MKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHG 405
Query: 174 HCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPN 233
C +++ + + M+ +GM D+ TY+ +I G+CK + DA + + +GL P+
Sbjct: 406 LCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPD 465
Query: 234 DVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDK 275
+TT++ G K G +EA + +M +G+ P++
Sbjct: 466 IWTYTTMMLGLYKKGL------RREADALFRKMKEDGILPNE 501
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 209 bits (533), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 122/369 (33%), Positives = 198/369 (53%), Gaps = 13/369 (3%)
Query: 60 LVLDALMIVYVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYLE 119
++ + L+ +V G LDDA + Y +P C + ++ +G LE
Sbjct: 354 VIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDV---CTYNSLIYGYWKEGLVGLALE 410
Query: 120 IL----DYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHC 175
+L + G P+VY + +L+ CK GKI +A V +E GL V FN LI+ C
Sbjct: 411 VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFC 470
Query: 176 KAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDV 235
K + E + M G +PDVYT+++LI+GLC+ + + A LL +M G+ N V
Sbjct: 471 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV 530
Query: 236 IFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESAL 295
+ TLI+ + G I KEARK+V+EM G D+ITY L+ G C+ G+++ A
Sbjct: 531 TYNTLINAFLRRGEI------KEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKAR 584
Query: 296 DIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCF 355
+ ++M++ G N++ LI+G CR G V EA +EM+ G PD T+ +I+
Sbjct: 585 SLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 644
Query: 356 CKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDD 415
C+ G + G + ++++++G P T+N LM+ LCK G + +A +LLD ++ G VP+
Sbjct: 645 CRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNH 704
Query: 416 ITYNILLEG 424
T++ILL+
Sbjct: 705 RTWSILLQS 713
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 112/334 (33%), Positives = 178/334 (53%), Gaps = 12/334 (3%)
Query: 127 PSVYVFNVLMHKLCKEGKIKDAQMVF-DEFGKRGLHATAVSFNTLINGHCKAKNLDEGFR 185
P + +FN L+H G++ DA+ V D G+ ++N+LI G+ K +
Sbjct: 351 PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALE 410
Query: 186 LKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHC 245
+ M G +P+VY+Y+ L++G CK ++D+A +L+EM GL PN V F LI C
Sbjct: 411 VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFC 470
Query: 246 KNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRG 305
K RI EA +I EM G PD T+ L+ G C+ +++ AL + ++MI G
Sbjct: 471 KEHRI------PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524
Query: 306 IELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGF 365
+ + V + LI+ F R G++ EA +++ EM+ G D+ TY +I C+ G+
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKAR 584
Query: 366 RLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGH 425
L ++M DGH P+ + N L+NGLC+ G ++ A M+ G PD +T+N L+ G
Sbjct: 585 SLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 644
Query: 426 CKHGNPED----FDKLQSEKGLVSDYACYTSLVS 455
C+ G ED F KLQ+E G+ D + +L+S
Sbjct: 645 CRAGRIEDGLTMFRKLQAE-GIPPDTVTFNTLMS 677
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 117/336 (34%), Positives = 184/336 (54%), Gaps = 14/336 (4%)
Query: 124 GYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEG 183
G++P + LM+ LCK G++ A+ +F K + V FNTLI+G LD+
Sbjct: 317 GFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEI----VIFNTLIHGFVTHGRLDDA 372
Query: 184 FRLKSVMEGS-GMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLID 242
+ S M S G+ PDV TY++LI G KE + A +LH+M +G PN +T L+D
Sbjct: 373 KAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVD 432
Query: 243 GHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMI 302
G CK G+ID EA +++EM +GL P+ + + L+ FCKE + A++I +EM
Sbjct: 433 GFCKLGKID------EAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMP 486
Query: 303 KRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTK 362
++G + D F +LISG C ++ A +LR+M+ G+ + TY +I+ F + G+ K
Sbjct: 487 RKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIK 546
Query: 363 TGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILL 422
+L+ EM G TYN+L+ GLC+ G++ A L + ML G P +I+ NIL+
Sbjct: 547 EARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILI 606
Query: 423 EGHCKHGNPEDFDKLQSE---KGLVSDYACYTSLVS 455
G C+ G E+ + Q E +G D + SL++
Sbjct: 607 NGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLIN 642
Score = 187 bits (475), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 132/482 (27%), Positives = 229/482 (47%), Gaps = 47/482 (9%)
Query: 3 FRLTLHAYSTMVHFLVAHKMHSQARDLLHLIVSKKGMGSSASLFASILETRGTHLPGLVL 62
+R + Y ++ L A+ + D L + + +G+ SLF SI+
Sbjct: 107 YRHSFDVYQVLIGKLGANG-EFKTIDRLLIQMKDEGIVFKESLFISIMRD---------- 155
Query: 63 DALMIVYVDLGFLDDAIQCFRLLRKHYFRIPA-RGCRCLIDRMMRTNLPTVTLGFYLEIL 121
Y GF + +R Y P + +++ ++ N V + ++L
Sbjct: 156 ------YDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDML 209
Query: 122 DYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLD 181
P+++ F V+M C +I A + + K G +V + TLI+ K ++
Sbjct: 210 SRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVN 269
Query: 182 EGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLI 241
E +L M G PD T++ +I GLCK +R+++A +++ M RG P+D+ + L+
Sbjct: 270 EALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLM 329
Query: 242 DGHCKNGRIDMA-------------------------GDMKEARKIVDEMCTN-GLNPDK 275
+G CK GR+D A G + +A+ ++ +M T+ G+ PD
Sbjct: 330 NGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDV 389
Query: 276 ITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLRE 335
TY L+ G+ KEG + AL++ +M +G + + ++T L+ GFC+ GK+ EA +L E
Sbjct: 390 CTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNE 449
Query: 336 MLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQ 395
M GLKP+ + +I FCK + +EM G P V T+N+L++GLC+ +
Sbjct: 450 MSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE 509
Query: 396 LKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPEDFDKLQSE---KGLVSDYACYTS 452
+K+A LL M+ GVV + +TYN L+ + G ++ KL +E +G D Y S
Sbjct: 510 IKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNS 569
Query: 453 LV 454
L+
Sbjct: 570 LI 571
Score = 186 bits (472), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 117/371 (31%), Positives = 187/371 (50%), Gaps = 38/371 (10%)
Query: 113 TLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLIN 172
L ++ +G P+ ++ L+H L K ++ +A + +E G A +FN +I
Sbjct: 236 ALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVIL 295
Query: 173 GHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTP 232
G CK ++E ++ + M G PD TY L+NGLCK R+D A+ L + + + P
Sbjct: 296 GLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----P 351
Query: 233 NDVIFTTLIDGHCKNGRIDMA----GDMKEARKIVDEMCT-------------------- 268
VIF TLI G +GR+D A DM + IV ++CT
Sbjct: 352 EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEV 411
Query: 269 ------NGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCR 322
G P+ +YTIL+DGFCK G ++ A ++ EM G++ + V F LIS FC+
Sbjct: 412 LHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCK 471
Query: 323 GGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVET 382
++ EA + REM + G KPD T+ +I C+ + K LL++M S+G + T
Sbjct: 472 EHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVT 531
Query: 383 YNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPED----FDKLQ 438
YN L+N + G++K A L++ M+ G D+ITYN L++G C+ G + F+K+
Sbjct: 532 YNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKML 591
Query: 439 SEKGLVSDYAC 449
+ S+ +C
Sbjct: 592 RDGHAPSNISC 602
Score = 185 bits (470), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 167/310 (53%), Gaps = 6/310 (1%)
Query: 120 ILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKN 179
+ YG P V +N L++ KEG + A V + +G S+ L++G CK
Sbjct: 380 VTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGK 439
Query: 180 LDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTT 239
+DE + + + M G++P+ ++ LI+ CKE+R+ +A + EM +G P+ F +
Sbjct: 440 IDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS 499
Query: 240 LIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRK 299
LI G C+ ++K A ++ +M + G+ + +TY L++ F + G+++ A +
Sbjct: 500 LISGLCE------VDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVN 553
Query: 300 EMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNG 359
EM+ +G LD + + +LI G CR G+V +A + +ML+ G P + + ++I+ C++G
Sbjct: 554 EMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSG 613
Query: 360 DTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYN 419
+ KEM G P + T+N+L+NGLC+ G++++ + + G+ PD +T+N
Sbjct: 614 MVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFN 673
Query: 420 ILLEGHCKHG 429
L+ CK G
Sbjct: 674 TLMSWLCKGG 683
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 88/161 (54%), Gaps = 6/161 (3%)
Query: 132 FNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVME 191
+N L+ LC+ G++ A+ +F++ + G + +S N LING C++ ++E + M
Sbjct: 567 YNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMV 626
Query: 192 GSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRID 251
G PD+ T+++LINGLC+ R++D + ++ G+ P+ V F TL+ CK G +
Sbjct: 627 LRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFV- 685
Query: 252 MAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLE 292
+A ++DE +G P+ T++ILL + L+
Sbjct: 686 -----YDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLD 721
Score = 34.3 bits (77), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 27/58 (46%)
Query: 124 GYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLD 181
G P FN LM LCK G + DA ++ DE + G +++ L+ + LD
Sbjct: 664 GIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLD 721
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 209 bits (533), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 117/335 (34%), Positives = 184/335 (54%), Gaps = 9/335 (2%)
Query: 124 GYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEG 183
G P ++ + +++ LCK G I A + + K + A V + T+I+ C KN+++
Sbjct: 215 GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDA 274
Query: 184 FRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDG 243
L + M+ G+RP+V TY++LI LC R DA LL +M ER + PN V F+ LID
Sbjct: 275 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 334
Query: 244 HCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIK 303
K G+ + EA K+ DEM ++PD TY+ L++GFC L+ A + + MI
Sbjct: 335 FVKEGK------LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 388
Query: 304 RGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKT 363
+ + V + LI GFC+ +V E + REM + GL + TY +I + GD
Sbjct: 389 KDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDM 448
Query: 364 GFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLE 423
++ K+M SDG P + TY+ L++GLCK+G+L+ A ++ + + + PD TYNI++E
Sbjct: 449 AQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIE 508
Query: 424 GHCKHGNPEDFDKL---QSEKGLVSDYACYTSLVS 455
G CK G ED L S KG+ + YT+++S
Sbjct: 509 GMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMIS 543
Score = 190 bits (482), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/443 (29%), Positives = 205/443 (46%), Gaps = 46/443 (10%)
Query: 9 AYSTMVHFLVAHKMHSQARDLLHLIVSKKGMGSSASLFASILETRGTHLPGLVLDALMIV 68
++T++H L H S+A L+ +V++ G LF T GT + GL
Sbjct: 187 TFNTLIHGLFLHNKASEAVALIDRMVAR---GCQPDLF-----TYGTVVNGLC------- 231
Query: 69 YVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYLEILDYGYSPS 128
G +D A+ + + K +ID + L + E+ + G P+
Sbjct: 232 --KRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 289
Query: 129 VYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKS 188
V +N L+ LC G+ DA + + +R ++ V+F+ LI+ K L E +L
Sbjct: 290 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349
Query: 189 VMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNG 248
M + PD++TYS+LING C +RLD+A+ + M + PN V + TLI G CK
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409
Query: 249 RID-----------------------------MAGDMKEARKIVDEMCTNGLNPDKITYT 279
R++ AGD A+KI +M ++G+ PD ITY+
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 469
Query: 280 ILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKV 339
ILLDG CK G LE AL + + + K +E D + +I G C+ GKV + + +
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 529
Query: 340 GLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNA 399
G+KP+ YT +I FC+ G + L +EM+ DG LP TYN L+ + G +
Sbjct: 530 GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAAS 589
Query: 400 NMLLDTMLDLGVVPDDITYNILL 422
L+ M G V D T ++++
Sbjct: 590 AELIKEMRSCGFVGDASTISMVI 612
Score = 183 bits (464), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 115/369 (31%), Positives = 178/369 (48%), Gaps = 34/369 (9%)
Query: 106 RTNLPTVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAV 165
R+ LP + L +++ GY P + + L++ C +I +A + D+ V
Sbjct: 128 RSQLP-LALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTV 186
Query: 166 SFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEM 225
+FNTLI+G E L M G +PD++TY ++NGLCK +D A LL +M
Sbjct: 187 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 246
Query: 226 CERGLTPNDVIFTTLIDGHCKNGRIDMA-----------------------------GDM 256
+ + + VI+TT+ID C ++ A G
Sbjct: 247 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 306
Query: 257 KEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTAL 316
+A +++ +M +NP+ +T++ L+D F KEG L A + EMIKR I+ D +++L
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366
Query: 317 ISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGH 376
I+GFC ++ EA+ M M+ P+ TY +I FCK + G L +EM G
Sbjct: 367 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426
Query: 377 LPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPED--- 433
+ TYN L+ GL + G A + M+ GV PD ITY+ILL+G CK+G E
Sbjct: 427 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALV 486
Query: 434 -FDKLQSEK 441
F+ LQ K
Sbjct: 487 VFEYLQKSK 495
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 185/358 (51%), Gaps = 12/358 (3%)
Query: 101 IDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGL 160
I +M + +L ++LG ++ L Y +Y +N+L++ C+ ++ A V + K G
Sbjct: 90 IAKMNKFDL-VISLGERMQNLRISYD--LYSYNILINCFCRRSQLPLALAVLGKMMKLGY 146
Query: 161 HATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAEL 220
V+ ++L+NG+C K + E L M +P+ T++ LI+GL N+ +A
Sbjct: 147 EPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVA 206
Query: 221 LLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTI 280
L+ M RG P+ + T+++G CK G ID+ A ++ +M + D + YT
Sbjct: 207 LIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL------ALSLLKKMEKGKIEADVVIYTT 260
Query: 281 LLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVG 340
++D C ++ AL++ EM +GI + V + +LI C G+ +A R+L +M++
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320
Query: 341 LKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNAN 400
+ P+ T++ +ID F K G +L EM P + TY++L+NG C H +L A
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 401 MLLDTMLDLGVVPDDITYNILLEGHCKHGNPEDFDKL---QSEKGLVSDYACYTSLVS 455
+ + M+ P+ +TYN L++G CK E+ +L S++GLV + Y +L+
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438
Score = 162 bits (410), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 143/302 (47%), Gaps = 6/302 (1%)
Query: 127 PSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRL 186
PS+ FN L+ + K K + + + S+N LIN C+ L +
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 187 KSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCK 246
M G PD+ T S+L+NG C R+ +A L+ +M PN V F TLI G
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHG--- 194
Query: 247 NGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGI 306
+ + EA ++D M G PD TY +++G CK GD++ AL + K+M K I
Sbjct: 195 ---LFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKI 251
Query: 307 ELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFR 366
E D V +T +I C V +A + EM G++P+ TY +I C C G R
Sbjct: 252 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 311
Query: 367 LLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHC 426
LL +M P V T++AL++ K G+L A L D M+ + PD TY+ L+ G C
Sbjct: 312 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371
Query: 427 KH 428
H
Sbjct: 372 MH 373
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 13/216 (6%)
Query: 250 IDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELD 309
+D+ G+M ++R + P + + LL K + + + + M I D
Sbjct: 65 VDLFGEMVQSRPL----------PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYD 114
Query: 310 NVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLK 369
++ LI+ FCR ++ A +L +M+K+G +PD T + +++ +C L+
Sbjct: 115 LYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVD 174
Query: 370 EMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHG 429
+M + P T+N L++GL H + A L+D M+ G PD TY ++ G CK G
Sbjct: 175 QMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 234
Query: 430 NPEDFDKL--QSEKGLV-SDYACYTSLVSKSSKYRQ 462
+ + L + EKG + +D YT+++ Y+
Sbjct: 235 DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKN 270
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 209 bits (531), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 118/335 (35%), Positives = 183/335 (54%), Gaps = 9/335 (2%)
Query: 124 GYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEG 183
G P + + V+++ LCK G A + ++ + L + +NT+I+G CK K++D+
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 275
Query: 184 FRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDG 243
L ME G+RP+V TYS+LI+ LC R DA LL +M ER + P+ F+ LID
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335
Query: 244 HCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIK 303
K G+ + EA K+ DEM ++P +TY+ L++GFC L+ A + + M+
Sbjct: 336 FVKEGK------LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 389
Query: 304 RGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKT 363
+ D V + LI GFC+ +V E + REM + GL + TY ++I + GD
Sbjct: 390 KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDM 449
Query: 364 GFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLE 423
+ KEM SDG P + TYN L++GLCK+G+L+ A ++ + + + P TYNI++E
Sbjct: 450 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 509
Query: 424 GHCKHGNPEDFDKL---QSEKGLVSDYACYTSLVS 455
G CK G ED L S KG+ D Y +++S
Sbjct: 510 GMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMIS 544
Score = 201 bits (512), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 104/331 (31%), Positives = 182/331 (54%), Gaps = 9/331 (2%)
Query: 127 PSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRL 186
P V ++N ++ LCK + DA +F E +G+ V++++LI+ C + RL
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 187 KSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCK 246
S M + PDV+T+SALI+ KE +L +AE L EM +R + P+ V +++LI+G C
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 247 NGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGI 306
+ R+D EA+++ + M + PD +TY L+ GFCK +E +++ +EM +RG+
Sbjct: 374 HDRLD------EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 427
Query: 307 ELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFR 366
+ V + LI G + G A+ + +EM+ G+ P+ TY ++D CKNG +
Sbjct: 428 VGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMV 487
Query: 367 LLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHC 426
+ + ++ P + TYN ++ G+CK G++++ L + GV PD + YN ++ G C
Sbjct: 488 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 547
Query: 427 KHGNPEDFDKL---QSEKGLVSDYACYTSLV 454
+ G+ E+ D L E G + + CY +L+
Sbjct: 548 RKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 203/386 (52%), Gaps = 13/386 (3%)
Query: 75 LDDAIQCF-RLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFN 133
LDDA+ F +++ F + L+ + + N V + ++ + G + Y ++
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSK-LLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 134 VLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGS 193
+L++ C+ ++ A V + K G V+ ++L+NG+C +K + E L M +
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 194 GMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMA 253
G +P+ T++ LI+GL N+ +A L+ M +G P+ V + +++G CK G D+A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 254 GDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAF 313
++ +++M L P + Y ++DG CK ++ AL++ KEM +GI + V +
Sbjct: 241 FNL------LNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY 294
Query: 314 TALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRS 373
++LIS C G+ +A R+L +M++ + PD T++ +ID F K G +L EM
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK 354
Query: 374 DGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPED 433
P++ TY++L+NG C H +L A + + M+ PD +TYN L++G CK+ E+
Sbjct: 355 RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEE 414
Query: 434 ----FDKLQSEKGLVSDYACYTSLVS 455
F ++ S++GLV + Y L+
Sbjct: 415 GMEVFREM-SQRGLVGNTVTYNILIQ 439
Score = 181 bits (460), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 201/432 (46%), Gaps = 26/432 (6%)
Query: 9 AYSTMVHFLVAHKMHSQARDLLHLIVSKKGMGSSASLFASILE----------------- 51
++T++H L H S+A L+ +V+K G + ++
Sbjct: 188 TFNTLIHGLFLHNKASEAMALIDRMVAK-GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNK 246
Query: 52 -TRGTHLPG-LVLDALMIVYVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNL 109
+G PG L+ + ++ +DDA+ F+ + R LI +
Sbjct: 247 MEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 306
Query: 110 PTVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNT 169
+ ++++ +P V+ F+ L+ KEGK+ +A+ ++DE KR + + V++++
Sbjct: 307 WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 366
Query: 170 LINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERG 229
LING C LDE ++ M PDV TY+ LI G CK R+++ + EM +RG
Sbjct: 367 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 426
Query: 230 LTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEG 289
L N V + LI G + G DMA ++I EM ++G+ P+ +TY LLDG CK G
Sbjct: 427 LVGNTVTYNILIQGLFQAGDCDMA------QEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480
Query: 290 DLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYT 349
LE A+ + + + + +E + +I G C+ GKV + + + G+KPD Y
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 540
Query: 350 MVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDL 409
+I FC+ G + L KEM+ DG LP YN L+ + G + + L+ M
Sbjct: 541 TMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSC 600
Query: 410 GVVPDDITYNIL 421
G D T ++
Sbjct: 601 GFAGDASTIGLV 612
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 97/187 (51%), Gaps = 2/187 (1%)
Query: 246 KNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRG 305
+NG ++ D +A + EM + P I ++ LL K + + + ++M G
Sbjct: 54 RNGLSELKLD--DAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG 111
Query: 306 IELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGF 365
I ++ ++ LI+ FCR ++ A +L +M+K+G +P+ T + +++ +C +
Sbjct: 112 IPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAV 171
Query: 366 RLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGH 425
L+ +M G+ P T+N L++GL H + A L+D M+ G PD +TY +++ G
Sbjct: 172 ALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGL 231
Query: 426 CKHGNPE 432
CK G+ +
Sbjct: 232 CKRGDTD 238
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 208 bits (529), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 125/451 (27%), Positives = 231/451 (51%), Gaps = 30/451 (6%)
Query: 9 AYSTMVHFLVAHKMHSQARDLLHLIVSKKGMGSSASLFASILETRGTHLPGLVLDALMIV 68
+ST+V+ S+A L+ +V K ++ I G L G V +AL+++
Sbjct: 142 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLI---NGLCLKGRVSEALVLI 198
Query: 69 --YVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYLEILDYGYS 126
V+ GF D + +L +R+ ++ + L + ++ +
Sbjct: 199 DRMVEYGFQPDEVTYGPVL----------------NRLCKSGNSALALDLFRKMEERNIK 242
Query: 127 PSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRL 186
SV +++++ LCK+G DA +F+E +G+ A V++++LI G C D+G ++
Sbjct: 243 ASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKM 302
Query: 187 KSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCK 246
M G + PDV T+SALI+ KE +L +A+ L +EM RG+ P+ + + +LIDG CK
Sbjct: 303 LREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK 362
Query: 247 NGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGI 306
+ EA ++ D M + G PD +TY+IL++ +CK ++ + + +E+ +G+
Sbjct: 363 ENC------LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416
Query: 307 ELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFR 366
+ + + L+ GFC+ GK+ A+ + +EM+ G+ P TY +++D C NG+
Sbjct: 417 IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALE 476
Query: 367 LLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHC 426
+ ++M+ + YN +++G+C ++ +A L ++ D GV PD +TYN+++ G C
Sbjct: 477 IFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLC 536
Query: 427 KHGNPEDFDKL---QSEKGLVSDYACYTSLV 454
K G+ + D L E G D Y L+
Sbjct: 537 KKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
Score = 196 bits (499), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 122/384 (31%), Positives = 194/384 (50%), Gaps = 11/384 (2%)
Query: 75 LDDAIQCFR-LLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFN 133
++DAI F +++ P R L + RT + LGF + G +Y
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNR-LCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 134 VLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGS 193
++++ C++ K+ A V K G ++F+TL+NG C + E L M
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 194 GMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMA 253
RPD+ T S LINGLC + R+ +A +L+ M E G P++V + +++ CK+G +A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 254 GDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAF 313
D+ +M + + Y+I++D CK+G + AL + EM +GI+ D V +
Sbjct: 230 LDL------FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTY 283
Query: 314 TALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRS 373
++LI G C GK + +MLREM+ + PD T++ +ID F K G L EM +
Sbjct: 284 SSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT 343
Query: 374 DGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPED 433
G P TYN+L++G CK L AN + D M+ G PD +TY+IL+ +CK +D
Sbjct: 344 RGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDD 403
Query: 434 FDKL---QSEKGLVSDYACYTSLV 454
+L S KGL+ + Y +LV
Sbjct: 404 GMRLFREISSKGLIPNTITYNTLV 427
Score = 179 bits (454), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 161/305 (52%), Gaps = 6/305 (1%)
Query: 119 EILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAK 178
E++ P V F+ L+ KEGK+ +A+ +++E RG+ +++N+LI+G CK
Sbjct: 305 EMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 364
Query: 179 NLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFT 238
L E ++ +M G PD+ TYS LIN CK R+DD L E+ +GL PN + +
Sbjct: 365 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYN 424
Query: 239 TLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIR 298
TL+ G C++G+++ A+++ EM + G+ P +TY ILLDG C G+L AL+I
Sbjct: 425 TLVLGFCQSGKLN------AAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIF 478
Query: 299 KEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKN 358
++M K + L + +I G C KV +A + + G+KPD TY ++I CK
Sbjct: 479 EKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKK 538
Query: 359 GDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITY 418
G L ++M+ DG P TYN L+ L ++ L++ M G D T
Sbjct: 539 GSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTI 598
Query: 419 NILLE 423
++++
Sbjct: 599 KMVID 603
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 146/314 (46%), Gaps = 44/314 (14%)
Query: 144 KIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYS 203
K+ DA +F+ + T + FN L + + K D ME +G+ D+YT +
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 204 ALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIV 263
+IN C++ +L A F+ L GR A K+
Sbjct: 110 IMINCYCRKKKLLFA------------------FSVL-------GR---------AWKL- 134
Query: 264 DEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRG 323
G PD IT++ L++GFC EG + A+ + M++ D V + LI+G C
Sbjct: 135 ------GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLK 188
Query: 324 GKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETY 383
G+V EA ++ M++ G +PD+ TY V++ CK+G++ L ++M +V Y
Sbjct: 189 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQY 248
Query: 384 NALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPEDFDKLQSE--- 440
+ +++ LCK G +A L + M G+ D +TY+ L+ G C G +D K+ E
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 308
Query: 441 KGLVSDYACYTSLV 454
+ ++ D +++L+
Sbjct: 309 RNIIPDVVTFSALI 322
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 116/239 (48%), Gaps = 31/239 (12%)
Query: 58 PGLVLDALMI-VYVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGF 116
P +V +++I Y +DD ++ FR I ++G LI + N T+ LGF
Sbjct: 383 PDIVTYSILINSYCKAKRVDDGMRLFR-------EISSKG---LIPNTITYN--TLVLGF 430
Query: 117 ------------YLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATA 164
+ E++ G PSV + +L+ LC G++ A +F++ K +
Sbjct: 431 CQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGI 490
Query: 165 VSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHE 224
+N +I+G C A +D+ + L + G++PDV TY+ +I GLCK+ L +A++L +
Sbjct: 491 GIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRK 550
Query: 225 MCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLD 283
M E G TP+D + LI H + + ++++EM G + D T +++D
Sbjct: 551 MKEDGCTPDDFTYNILIRAHLG------GSGLISSVELIEEMKVCGFSADSSTIKMVID 603
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 88/212 (41%), Gaps = 18/212 (8%)
Query: 9 AYSTMVHFLVAHKMHSQARDLLHLIVSKKGMGSSASLFASILETRGTHLPGLVLDALMIV 68
Y+T+V + A++L +VS+ G+ S + G++LD L
Sbjct: 422 TYNTLVLGFCQSGKLNAAKELFQEMVSR-GVPPSVVTY------------GILLDGL--- 465
Query: 69 YVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYLEILDYGYSPS 128
D G L+ A++ F ++K + +I M + + + D G P
Sbjct: 466 -CDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPD 524
Query: 129 VYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKS 188
V +NV++ LCK+G + +A M+F + + G ++N LI H L L
Sbjct: 525 VVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIE 584
Query: 189 VMEGSGMRPDVYTYSALINGLCKENRLDDAEL 220
M+ G D T +I+ L + RLD + L
Sbjct: 585 EMKVCGFSADSSTIKMVIDML-SDRRLDKSFL 615
>sp|Q8S8P6|PP180_ARATH Pentatricopeptide repeat-containing protein At2g32630
OS=Arabidopsis thaliana GN=At2g32630 PE=3 SV=1
Length = 624
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 138/496 (27%), Positives = 229/496 (46%), Gaps = 49/496 (9%)
Query: 7 LHAYSTMVHFLVAHKMHSQARDLLHLIVSKKGMGSSASLFASIL-----ETRGTHLPGLV 61
L A T+ H L +++ ++ R LL+ +V+ S +
Sbjct: 97 LTAVVTLSHRLYSNRRFNEMRSLLNSVVNDGFYKRPVEELGSAMVDCDISEEKFEFFEKF 156
Query: 62 LDALMIVYVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYLEIL 121
D + VYVD G ++ ++ F + K I R C + + + L + ++
Sbjct: 157 FDLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMV 216
Query: 122 DYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLD 181
D G +VY +++ LC+ G+++ ++ + EF +G+ A ++NT+IN + K ++
Sbjct: 217 DSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFS 276
Query: 182 EGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLI 241
+ VM+ G+ + TY+ L+ K ++ DAE L EM ERG+ + ++T+LI
Sbjct: 277 GVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLI 336
Query: 242 DGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEM 301
+C+ G+MK A + DE+ GL+P TY L+DG CK G++ +A + EM
Sbjct: 337 SWNCRK------GNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEM 390
Query: 302 IKRGIELDNVAFTALISGFCRGGKV----------------------------------- 326
+G+ + V F LI G+CR G V
Sbjct: 391 QSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRY 450
Query: 327 VEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNAL 386
EA++ L M++ G+K +YT +ID +CK G+ + RL EM S G P TYN +
Sbjct: 451 DEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVM 510
Query: 387 MNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPEDFDKLQSE---KGL 443
+ CK G++K A L M G+ PD TY L+ G C N ++ +L SE KGL
Sbjct: 511 IYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGL 570
Query: 444 VSDYACYTSLVSKSSK 459
+ YT ++S SK
Sbjct: 571 DQNSVTYTVMISGLSK 586
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/327 (31%), Positives = 172/327 (52%), Gaps = 11/327 (3%)
Query: 132 FNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVME 191
+ +LM K GK+ DA+ +FDE +RG+ + + +LI+ +C+ N+ F L +
Sbjct: 297 YTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELT 356
Query: 192 GSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRID 251
G+ P YTY ALI+G+CK + AE+L++EM +G+ V+F TLIDG+C+ G +D
Sbjct: 357 EKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVD 416
Query: 252 MAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNV 311
EA I D M G D T + F + + A M++ G++L V
Sbjct: 417 ------EASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTV 470
Query: 312 AFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEM 371
++T LI +C+ G V EA+R+ EM G++P+ TY ++I +CK G K +L M
Sbjct: 471 SYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANM 530
Query: 372 RSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNP 431
++G P TY +L++G C + A L M G+ + +TY +++ G K G
Sbjct: 531 EANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKS 590
Query: 432 ED----FDKLQSEKGLVSDYACYTSLV 454
++ +D+++ KG D YT+L+
Sbjct: 591 DEAFGLYDEMK-RKGYTIDNKVYTALI 616
Score = 172 bits (436), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 169/326 (51%), Gaps = 6/326 (1%)
Query: 65 LMIVYVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYLEILDYG 124
LM + V G + DA + F +R+ LI R + E+ + G
Sbjct: 300 LMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKG 359
Query: 125 YSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGF 184
SPS Y + L+ +CK G++ A+++ +E +G++ T V FNTLI+G+C+ +DE
Sbjct: 360 LSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEAS 419
Query: 185 RLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGH 244
+ VME G + DV+T + + + + R D+A+ L M E G+ + V +T LID +
Sbjct: 420 MIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVY 479
Query: 245 CKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKR 304
CK G ++ EA+++ EM + G+ P+ ITY +++ +CK+G ++ A +R M
Sbjct: 480 CKEGNVE------EAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEAN 533
Query: 305 GIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTG 364
G++ D+ +T+LI G C V EA R+ EM GL + TYT++I K G +
Sbjct: 534 GMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEA 593
Query: 365 FRLLKEMRSDGHLPAVETYNALMNGL 390
F L EM+ G+ + Y AL+ +
Sbjct: 594 FGLYDEMKRKGYTIDNKVYTALIGSM 619
Score = 122 bits (306), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 125/249 (50%), Gaps = 6/249 (2%)
Query: 34 VSKKGMGSSASLFASILETRGTHLPGLVLDALMIVYVDLGFLDDAIQCFRLLRKHYFRIP 93
V K G +A + + ++++G ++ +V + L+ Y G +D+A + ++ + F+
Sbjct: 374 VCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQAD 433
Query: 94 ARGCRCLIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFD 153
C + R + +++ G S + L+ CKEG +++A+ +F
Sbjct: 434 VFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFV 493
Query: 154 EFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKEN 213
E +G+ A+++N +I +CK + E +L++ ME +GM PD YTY++LI+G C +
Sbjct: 494 EMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIAD 553
Query: 214 RLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNP 273
+D+A L EM +GL N V +T +I G K G+ D EA + DEM G
Sbjct: 554 NVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSD------EAFGLYDEMKRKGYTI 607
Query: 274 DKITYTILL 282
D YT L+
Sbjct: 608 DNKVYTALI 616
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 206 bits (523), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 121/389 (31%), Positives = 207/389 (53%), Gaps = 21/389 (5%)
Query: 76 DDAIQCFRLLRKHYFRIPARGCRCLID------RMMRTNLPTVTLGFYLEILDYGYSPSV 129
DDA+ FR + I +R +ID + +T + L ++ G + S+
Sbjct: 70 DDAVDLFRDM------IQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSI 123
Query: 130 YVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSV 189
Y +++++ C+ K+ A + K G V FNTL+NG C + E L
Sbjct: 124 YTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDR 183
Query: 190 MEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGR 249
M G +P + T + L+NGLC ++ DA +L+ M E G PN+V + +++ CK+G+
Sbjct: 184 MVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQ 243
Query: 250 IDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELD 309
+A M+ RK M + D + Y+I++DG CK+G L++A ++ EM +G + D
Sbjct: 244 TALA--MELLRK----MEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD 297
Query: 310 NVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLK 369
+ + LI GFC G+ + ++LR+M+K + P+ T++++ID F K G + +LLK
Sbjct: 298 IITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLK 357
Query: 370 EMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHG 429
EM G P TYN+L++G CK +L+ A ++D M+ G PD +T+NIL+ G+CK
Sbjct: 358 EMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKAN 417
Query: 430 NPEDFDKLQSE---KGLVSDYACYTSLVS 455
+D +L E +G++++ Y +LV
Sbjct: 418 RIDDGLELFREMSLRGVIANTVTYNTLVQ 446
Score = 199 bits (507), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 106/326 (32%), Positives = 177/326 (54%), Gaps = 10/326 (3%)
Query: 120 ILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKN 179
+++ G+ P++ N L++ LC GK+ DA ++ D + G V++ ++N CK+
Sbjct: 184 MVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQ 243
Query: 180 LDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTT 239
L ME ++ D YS +I+GLCK+ LD+A L +EM +G + + + T
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNT 303
Query: 240 LIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRK 299
LI G C GR D + K++ +M ++P+ +T+++L+D F KEG L A + K
Sbjct: 304 LIGGFCNAGRWD------DGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLK 357
Query: 300 EMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNG 359
EM++RGI + + + +LI GFC+ ++ EA +M+ M+ G PD T+ ++I+ +CK
Sbjct: 358 EMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKAN 417
Query: 360 DTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYN 419
G L +EM G + TYN L+ G C+ G+L+ A L M+ V PD ++Y
Sbjct: 418 RIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYK 477
Query: 420 ILLEGHCKHGNPED----FDKLQSEK 441
ILL+G C +G E F K++ K
Sbjct: 478 ILLDGLCDNGELEKALEIFGKIEKSK 503
Score = 193 bits (490), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 176/329 (53%), Gaps = 41/329 (12%)
Query: 132 FNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVME 191
+++++ LCK+G + +A +F+E +G A +++NTLI G C A D+G +L M
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 192 GSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRID 251
+ P+V T+S LI+ KE +L +A+ LL EM +RG+ PN + + +LIDG CK R++
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 252 MAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNV 311
EA ++VD M + G +PD +T+ IL++G+CK ++ L++ +EM RG+ + V
Sbjct: 386 ------EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV 439
Query: 312 AFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEM 371
+ L+ GFC+ GK+ A+++ +EM+ ++PD +Y +++D C NG+ + + ++
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI 499
Query: 372 RSDG-----------------------------HLPA------VETYNALMNGLCKHGQL 396
LP YN +++ LC+ L
Sbjct: 500 EKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSL 559
Query: 397 KNANMLLDTMLDLGVVPDDITYNILLEGH 425
A++L M + G PD++TYNIL+ H
Sbjct: 560 SKADILFRKMTEEGHAPDELTYNILIRAH 588
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 158/292 (54%), Gaps = 7/292 (2%)
Query: 126 SPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFR 185
SP+V F+VL+ KEGK+++A + E +RG+ +++N+LI+G CK L+E +
Sbjct: 330 SPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQ 389
Query: 186 LKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHC 245
+ +M G PD+ T++ LING CK NR+DD L EM RG+ N V + TL+ G C
Sbjct: 390 MVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFC 449
Query: 246 KNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRG 305
++G++++A +K+ EM + + PD ++Y ILLDG C G+LE AL+I ++ K
Sbjct: 450 QSGKLEVA------KKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSK 503
Query: 306 IELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGF 365
+ELD + +I G C KV +A + + G+K D Y ++I C+
Sbjct: 504 MELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKAD 563
Query: 366 RLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDIT 417
L ++M +GH P TYN L+ A L++ M G P D++
Sbjct: 564 ILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSG-FPADVS 614
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 53/117 (45%)
Query: 310 NVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLK 369
N+++ +S G K +A + R+M++ P + + K + L K
Sbjct: 53 NLSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCK 112
Query: 370 EMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHC 426
+M S G ++ T + ++N C+ +L A + ++ LG PD + +N LL G C
Sbjct: 113 QMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLC 169
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 205 bits (522), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 119/359 (33%), Positives = 193/359 (53%), Gaps = 9/359 (2%)
Query: 100 LIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRG 159
LI + R N + + ++ G P + + ++++ LCK G I A + + +
Sbjct: 192 LIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGK 251
Query: 160 LHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAE 219
+ V +NT+I+ C KN+++ L + M+ G+RP+V TY++LI LC R DA
Sbjct: 252 IEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 311
Query: 220 LLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYT 279
LL +M ER + PN V F+ LID K G+ + EA K+ DEM ++PD TY+
Sbjct: 312 RLLSDMIERKINPNVVTFSALIDAFVKEGK------LVEAEKLYDEMIKRSIDPDIFTYS 365
Query: 280 ILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKV 339
L++GFC L+ A + + MI + + V + LI GFC+ +V E + REM +
Sbjct: 366 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQR 425
Query: 340 GLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNA 399
GL + TYT +I F + + + K+M SDG LP + TY+ L++GLC +G+++ A
Sbjct: 426 GLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETA 485
Query: 400 NMLLDTMLDLGVVPDDITYNILLEGHCKHGNPEDFDKL---QSEKGLVSDYACYTSLVS 455
++ + + + PD TYNI++EG CK G ED L S KG+ + YT+++S
Sbjct: 486 LVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMS 544
Score = 191 bits (486), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 181/331 (54%), Gaps = 9/331 (2%)
Query: 127 PSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRL 186
P V ++N ++ LC + DA +F E +G+ V++N+LI C + RL
Sbjct: 254 PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 313
Query: 187 KSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCK 246
S M + P+V T+SALI+ KE +L +AE L EM +R + P+ +++LI+G C
Sbjct: 314 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 373
Query: 247 NGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGI 306
+ R+D EA+ + + M + P+ +TY L+ GFCK ++ +++ +EM +RG+
Sbjct: 374 HDRLD------EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL 427
Query: 307 ELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFR 366
+ V +T LI GF + + A+ + ++M+ G+ PD TY++++D C NG +T
Sbjct: 428 VGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALV 487
Query: 367 LLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHC 426
+ + ++ P + TYN ++ G+CK G++++ L ++ GV P+ +TY ++ G C
Sbjct: 488 VFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 547
Query: 427 KHGNPEDFDKL---QSEKGLVSDYACYTSLV 454
+ G E+ D L E+G + D Y +L+
Sbjct: 548 RKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Score = 188 bits (477), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 121/422 (28%), Positives = 203/422 (48%), Gaps = 23/422 (5%)
Query: 9 AYSTMVHFLVAHKMHSQARDLLHLIVSKKGMGSSASLFASILETRGTHLPGLVLDALMIV 68
++T++H L H S+A L+ +V K G L G+V++ L
Sbjct: 188 TFNTLIHGLFRHNRASEAVALVDRMVVK---GCQPDLVTY----------GIVVNGL--- 231
Query: 69 YVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYLEILDYGYSPS 128
G +D A+ + + + +ID + L + E+ + G P+
Sbjct: 232 -CKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPN 290
Query: 129 VYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKS 188
V +N L+ LC G+ DA + + +R ++ V+F+ LI+ K L E +L
Sbjct: 291 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 350
Query: 189 VMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNG 248
M + PD++TYS+LING C +RLD+A+ + M + PN V + TLI G CK
Sbjct: 351 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 410
Query: 249 RIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIEL 308
R+D E ++ EM GL + +TYT L+ GF + + ++A + K+M+ G+
Sbjct: 411 RVD------EGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLP 464
Query: 309 DNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLL 368
D + ++ L+ G C GKV A + + + ++PD TY ++I+ CK G + G+ L
Sbjct: 465 DIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 369 KEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKH 428
+ G P V TY +M+G C+ G + A+ L M + G +PD TYN L+ H +
Sbjct: 525 CSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRD 584
Query: 429 GN 430
G+
Sbjct: 585 GD 586
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 200/386 (51%), Gaps = 15/386 (3%)
Query: 75 LDDAIQCF-RLLRKHYFRIPARGCRCL--IDRMMRTNLPTVTLGFYLEILDYGYSPSVYV 131
LDDA+ F +++ F + L I +M + +L ++LG ++ L G S ++Y
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDL-VISLGEQMQNL--GISHNLYT 118
Query: 132 FNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVME 191
+++L++ C+ ++ A V + K G V+ N+L+NG C + + L M
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178
Query: 192 GSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRID 251
G +PD +T++ LI+GL + NR +A L+ M +G P+ V + +++G CK G ID
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238
Query: 252 MAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNV 311
+ A ++ +M + P + Y ++D C ++ AL++ EM +GI + V
Sbjct: 239 L------ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 292
Query: 312 AFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEM 371
+ +LI C G+ +A R+L +M++ + P+ T++ +ID F K G +L EM
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 372 RSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNP 431
P + TY++L+NG C H +L A + + M+ P+ +TYN L++G CK
Sbjct: 353 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 412
Query: 432 EDFDKL---QSEKGLVSDYACYTSLV 454
++ +L S++GLV + YT+L+
Sbjct: 413 DEGMELFREMSQRGLVGNTVTYTTLI 438
Score = 173 bits (439), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/303 (32%), Positives = 161/303 (53%), Gaps = 6/303 (1%)
Query: 119 EILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAK 178
++++ +P+V F+ L+ KEGK+ +A+ ++DE KR + ++++LING C
Sbjct: 316 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 179 NLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFT 238
LDE + +M P+V TY+ LI G CK R+D+ L EM +RGL N V +T
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435
Query: 239 TLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIR 298
TLI G + A + A+ + +M ++G+ PD +TY+ILLDG C G +E+AL +
Sbjct: 436 TLIHGFFQ------ARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVF 489
Query: 299 KEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKN 358
+ + + +E D + +I G C+ GKV + + + G+KP+ TYT ++ FC+
Sbjct: 490 EYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRK 549
Query: 359 GDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITY 418
G + L +EM+ +G LP TYN L+ + G + L+ M V D T
Sbjct: 550 GLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI 609
Query: 419 NIL 421
++
Sbjct: 610 GLV 612
Score = 115 bits (288), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 135/269 (50%), Gaps = 12/269 (4%)
Query: 189 VMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNG 248
V + SG+R D S IN L + +LDDA L +M + P+ V F+ L+ K
Sbjct: 39 VRDFSGVRYDYRKIS--INRL-NDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMN 95
Query: 249 RIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIEL 308
+ D+ + E +M G++ + TY+IL++ FC+ L AL + +M+K G E
Sbjct: 96 KFDLVISLGE------QMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEP 149
Query: 309 DNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLL 368
D V +L++GFC G ++ +A ++ +M+++G +PD T+ +I ++ L+
Sbjct: 150 DIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALV 209
Query: 369 KEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKH 428
M G P + TY ++NGLCK G + A LL M + P + YN +++ C +
Sbjct: 210 DRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNY 269
Query: 429 GNPEDFDKLQSE---KGLVSDYACYTSLV 454
N D L +E KG+ + Y SL+
Sbjct: 270 KNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 205 bits (522), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 123/414 (29%), Positives = 205/414 (49%), Gaps = 70/414 (16%)
Query: 120 ILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKN 179
++D+G SP+++V+N L+ LCK K +A+++FD GK GL V+++ LI+ C+
Sbjct: 358 VVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGK 417
Query: 180 LDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTT 239
LD M +G++ VY Y++LING CK + AE + EM + L P V +T+
Sbjct: 418 LDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTS 477
Query: 240 LIDGHCKNGRIDMA-----------------------------GDMKEARKIVDEMCTNG 270
L+ G+C G+I+ A G +++A K+ +EM
Sbjct: 478 LMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWN 537
Query: 271 LNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGI------------------------ 306
+ P+++TY ++++G+C+EGD+ A + KEM ++GI
Sbjct: 538 VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK 597
Query: 307 -----------ELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCF 355
EL+ + +T L+ GFCR GK+ EA + +EM++ G+ D Y ++ID
Sbjct: 598 VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGS 657
Query: 356 CKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDD 415
K+ D K F LLKEM G P Y ++++ K G K A + D M++ G VP++
Sbjct: 658 LKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNE 717
Query: 416 ITYNILLEGHCKHGNPEDFDKLQSEKGLVSD------YACYTSLVSKSSKYRQK 463
+TY ++ G CK G + + L S+ VS Y C+ +++K QK
Sbjct: 718 VTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQK 771
Score = 195 bits (496), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 209/426 (49%), Gaps = 33/426 (7%)
Query: 62 LDALMIVYVDLGFLDDAIQCFRLLRKHYFRIP-ARGCRCLIDRMMRTNLPTVTLGFYLEI 120
D L+ YV + D + F+++ +P R L+ +++ + + + ++
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 121 LDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNL 180
+ G P VY++ ++ LC+ + A+ + G V +N LI+G CK + +
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 181 DEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTL 240
E +K + G ++PDV TY L+ GLCK + ++ EM +P++ ++L
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 241 IDGHCKNGRIDMAGDM-----------------------------KEARKIVDEMCTNGL 271
++G K G+I+ A ++ EA + D M GL
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGL 398
Query: 272 NPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAER 331
P+ +TY+IL+D FC+ G L++AL EM+ G++L + +LI+G C+ G + AE
Sbjct: 399 RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEG 458
Query: 332 MLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLC 391
+ EM+ L+P TYT ++ +C G RL EM G P++ T+ L++GL
Sbjct: 459 FMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLF 518
Query: 392 KHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPE---DFDKLQSEKGLVSDYA 448
+ G +++A L + M + V P+ +TYN+++EG+C+ G+ +F K +EKG+V D
Sbjct: 519 RAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTY 578
Query: 449 CYTSLV 454
Y L+
Sbjct: 579 SYRPLI 584
Score = 189 bits (481), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 114/349 (32%), Positives = 176/349 (50%), Gaps = 9/349 (2%)
Query: 119 EILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAK 178
E+L +SPS + L+ L K GKI++A + G+ +N LI+ CK +
Sbjct: 322 EMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGR 381
Query: 179 NLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFT 238
E L M G+RP+ TYS LI+ C+ +LD A L EM + GL + +
Sbjct: 382 KFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYN 441
Query: 239 TLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIR 298
+LI+GHCK GD+ A + EM L P +TYT L+ G+C +G + AL +
Sbjct: 442 SLINGHCK------FGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLY 495
Query: 299 KEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKN 358
EM +GI FT L+SG R G + +A ++ EM + +KP+ TY ++I+ +C+
Sbjct: 496 HEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEE 555
Query: 359 GDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITY 418
GD F LKEM G +P +Y L++GLC GQ A + +D + ++I Y
Sbjct: 556 GDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICY 615
Query: 419 NILLEGHCKHGNPEDFDKLQSE---KGLVSDYACYTSLVSKSSKYRQKR 464
LL G C+ G E+ + E +G+ D CY L+ S K++ ++
Sbjct: 616 TGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRK 664
Score = 173 bits (439), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 182/401 (45%), Gaps = 67/401 (16%)
Query: 113 TLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLIN 172
L Y E+ G +PS+Y F L+ L + G I+DA +F+E + + V++N +I
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIE 550
Query: 173 GHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTP 232
G+C+ ++ + F M G+ PD Y+Y LI+GLC + +A++ + + +
Sbjct: 551 GYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCEL 610
Query: 233 NDVIFTTLIDGHCKNGRIDMA------------------------GDMKEARK-----IV 263
N++ +T L+ G C+ G+++ A G +K + ++
Sbjct: 611 NEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLL 670
Query: 264 DEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRG 323
EM GL PD + YT ++D K GD + A I MI G + V +TA+I+G C+
Sbjct: 671 KEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKA 730
Query: 324 GKVVEAERMLREMLKV-----------------------------------GLKPDDATY 348
G V EAE + +M V GL + ATY
Sbjct: 731 GFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATY 790
Query: 349 TMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLD 408
M+I FC+ G + L+ M DG P TY ++N LC+ +K A L ++M +
Sbjct: 791 NMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTE 850
Query: 409 LGVVPDDITYNILLEGHCKHGNPEDFDKLQSE---KGLVSD 446
G+ PD + YN L+ G C G +L++E +GL+ +
Sbjct: 851 KGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 166 bits (420), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 184/377 (48%), Gaps = 23/377 (6%)
Query: 82 FRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNVLMHKLCK 141
F LL +HY R R ++D + L F + I P V + L+H L K
Sbjct: 159 FDLLIQHYVR-----SRRVLDGV---------LVFKMMITKVSLLPEVRTLSALLHGLVK 204
Query: 142 EGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYT 201
A +F++ G+ + +I C+ K+L + + ME +G ++
Sbjct: 205 FRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVP 264
Query: 202 YSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARK 261
Y+ LI+GLCK+ ++ +A + ++ + L P+ V + TL+ G CK ++ +M
Sbjct: 265 YNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEM----- 319
Query: 262 IVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFC 321
+DEM +P + + L++G K G +E AL++ K ++ G+ + + ALI C
Sbjct: 320 -MDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLC 378
Query: 322 RGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVE 381
+G K EAE + M K+GL+P+D TY+++ID FC+ G T L EM G +V
Sbjct: 379 KGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVY 438
Query: 382 TYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPEDFDKLQSE- 440
YN+L+NG CK G + A + M++ + P +TY L+ G+C G +L E
Sbjct: 439 PYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEM 498
Query: 441 --KGLVSDYACYTSLVS 455
KG+ +T+L+S
Sbjct: 499 TGKGIAPSIYTFTTLLS 515
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 150/298 (50%), Gaps = 10/298 (3%)
Query: 167 FNTLINGHCKAKN-LDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEM 225
F+ LI + +++ LD K ++ + P+V T SAL++GL K A L ++M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 226 CERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGF 285
G+ P+ I+T +I C+ D+ A++++ M G + + + Y +L+DG
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCE------LKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGL 272
Query: 286 CKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDD 345
CK+ + A+ I+K++ + ++ D V + L+ G C+ + M+ EML + P +
Sbjct: 273 CKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSE 332
Query: 346 ATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDT 405
A + +++ K G + L+K + G P + YNAL++ LCK + A +L D
Sbjct: 333 AAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDR 392
Query: 406 MLDLGVVPDDITYNILLEGHCKHGNPE---DFDKLQSEKGLVSDYACYTSLVSKSSKY 460
M +G+ P+D+TY+IL++ C+ G + F + GL Y SL++ K+
Sbjct: 393 MGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKF 450
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 58/111 (52%)
Query: 124 GYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEG 183
G + +N+L+ C++G+I++A + G+ +++ T+IN C+ ++ +
Sbjct: 782 GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKA 841
Query: 184 FRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPND 234
L + M G+RPD Y+ LI+G C + A L +EM +GL PN+
Sbjct: 842 IELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNN 892
>sp|P0C8Q3|PP326_ARATH Pentatricopeptide repeat-containing protein At4g19890
OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1
Length = 701
Score = 204 bits (520), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 115/367 (31%), Positives = 189/367 (51%), Gaps = 30/367 (8%)
Query: 97 CRCLIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFG 156
C ++ + L + ++ +++D G+ P++ F L+ LCK+G IK A + +E
Sbjct: 255 CTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMV 314
Query: 157 KRGLHATAVSFNTLINGHCKAKNLDEGFRL-KSVMEGSGMRPDVYTYSALINGLCKENRL 215
+ G + LI+G CK ++ FRL ++ +P+V+TY+++I G CKE++L
Sbjct: 315 RNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKL 374
Query: 216 DDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGR-------IDMAGD------------- 255
+ AE+L M E+GL PN +TTLI+GHCK G +++ GD
Sbjct: 375 NRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAA 434
Query: 256 ---------MKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGI 306
EA +++++ + GL D +TYTIL+ CK+ D+ AL M K G
Sbjct: 435 IDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGF 494
Query: 307 ELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFR 366
E D LI+ FCR K+ E+ER+ + ++ +GL P TYT +I C+CK GD +
Sbjct: 495 EADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALK 554
Query: 367 LLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHC 426
M+ G +P TY +L++GLCK + A L + M+D G+ P ++T L +C
Sbjct: 555 YFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYC 614
Query: 427 KHGNPED 433
K + +
Sbjct: 615 KRNDSAN 621
Score = 176 bits (447), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 170/334 (50%), Gaps = 7/334 (2%)
Query: 98 RCLIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGK 157
RC++ +G +++ + G +PS N ++ + G I+ A+ VFDE
Sbjct: 151 RCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSV 210
Query: 158 RGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDD 217
RG+ + S+ ++ G + + E R + M G PD T + ++ LC+ ++
Sbjct: 211 RGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNR 270
Query: 218 AELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKIT 277
A +M + G PN + FT+LIDG CK G I K+A ++++EM NG P+ T
Sbjct: 271 AIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSI------KQAFEMLEEMVRNGWKPNVYT 324
Query: 278 YTILLDGFCKEGDLESALDIRKEMIKRGIELDNV-AFTALISGFCRGGKVVEAERMLREM 336
+T L+DG CK G E A + ++++ NV +T++I G+C+ K+ AE + M
Sbjct: 325 HTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRM 384
Query: 337 LKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQL 396
+ GL P+ TYT +I+ CK G + L+ M +G +P + TYNA ++ LCK +
Sbjct: 385 KEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRA 444
Query: 397 KNANMLLDTMLDLGVVPDDITYNILLEGHCKHGN 430
A LL+ G+ D +TY IL++ CK +
Sbjct: 445 PEAYELLNKAFSCGLEADGVTYTILIQEQCKQND 478
Score = 155 bits (393), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 155/322 (48%), Gaps = 32/322 (9%)
Query: 125 YSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGF 184
Y P+V+ + ++ CKE K+ A+M+F ++GL ++ TLINGHCKA + +
Sbjct: 354 YKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAY 413
Query: 185 RLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGH 244
L ++M G P++YTY+A I+ LCK++R +A LL++ GL + V +T LI
Sbjct: 414 ELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQ 473
Query: 245 CKNGRIDMA-----------------------------GDMKEARKIVDEMCTNGLNPDK 275
CK I+ A MKE+ ++ + + GL P K
Sbjct: 474 CKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTK 533
Query: 276 ITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLRE 335
TYT ++ +CKEGD++ AL M + G D+ + +LISG C+ V EA ++
Sbjct: 534 ETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEA 593
Query: 336 MLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQ 395
M+ GL P + T + +CK D+ LL+ + D L + T L+ LC +
Sbjct: 594 MIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPL--DKKL-WIRTVRTLVRKLCSEKK 650
Query: 396 LKNANMLLDTMLDLGVVPDDIT 417
+ A + +L+ D +T
Sbjct: 651 VGVAALFFQKLLEKDSSADRVT 672
Score = 109 bits (272), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 107/205 (52%), Gaps = 4/205 (1%)
Query: 254 GDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAF 313
G + EA +V +M GL P IT +L+ + G +E A ++ EM RG+ D+ ++
Sbjct: 161 GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY 220
Query: 314 TALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRS 373
++ G R GK+ EA+R L M++ G PD+AT T+++ C+NG ++M
Sbjct: 221 KLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMID 280
Query: 374 DGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPED 433
G P + + +L++GLCK G +K A +L+ M+ G P+ T+ L++G CK G E
Sbjct: 281 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEK 340
Query: 434 ----FDKLQSEKGLVSDYACYTSLV 454
F KL + YTS++
Sbjct: 341 AFRLFLKLVRSDTYKPNVHTYTSMI 365
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 89/232 (38%), Gaps = 10/232 (4%)
Query: 75 LDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNV 134
++ A+ F + K F R LI R + + ++ G P+ +
Sbjct: 479 INQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTS 538
Query: 135 LMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSG 194
++ CKEG I A F + G + ++ +LI+G CK +DE +L M G
Sbjct: 539 MISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRG 598
Query: 195 MRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAG 254
+ P T L CK N +A +LL + ++ L V TL+ C ++ +A
Sbjct: 599 LSPPEVTRVTLAYEYCKRNDSANAMILLEPL-DKKLWIRTV--RTLVRKLCSEKKVGVAA 655
Query: 255 DMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGI 306
++ + D++T C E + + E I RG+
Sbjct: 656 ------LFFQKLLEKDSSADRVTLAAFTTA-CSESGKNNLVTDLTERISRGV 700
Score = 40.0 bits (92), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 60/129 (46%), Gaps = 16/129 (12%)
Query: 351 VIDCFCKN----GDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTM 406
V+ C +N G ++ +M++ G P+ T N ++ + G ++ A + D M
Sbjct: 149 VMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEM 208
Query: 407 LDLGVVPDDITYNILLEGHCKHGNPEDFDKLQS---EKGLVSDYA---------CYTSLV 454
GVVPD +Y +++ G + G ++ D+ + ++G + D A C LV
Sbjct: 209 SVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLV 268
Query: 455 SKSSKYRQK 463
+++ Y +K
Sbjct: 269 NRAIWYFRK 277
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 204 bits (520), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 109/348 (31%), Positives = 188/348 (54%), Gaps = 9/348 (2%)
Query: 111 TVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTL 170
++ L ++L GY P L++ C+ ++ DA + D+ + G V++N +
Sbjct: 137 SLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAI 196
Query: 171 INGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGL 230
I+ CK K +++ F +E G+RP+V TY+AL+NGLC +R DA LL +M ++ +
Sbjct: 197 IDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKI 256
Query: 231 TPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGD 290
TPN + ++ L+D KNG++ EA+++ +EM ++PD +TY+ L++G C
Sbjct: 257 TPNVITYSALLDAFVKNGKV------LEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR 310
Query: 291 LESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTM 350
++ A + M+ +G D V++ LI+GFC+ +V + ++ REM + GL + TY
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370
Query: 351 VIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLG 410
+I F + GD +M G P + TYN L+ GLC +G+L+ A ++ + M
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 430
Query: 411 VVPDDITYNILLEGHCKHGNPEDFDKL---QSEKGLVSDYACYTSLVS 455
+ D +TY ++ G CK G E+ L S KGL D YT+++S
Sbjct: 431 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMS 478
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 175/330 (53%), Gaps = 6/330 (1%)
Query: 100 LIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRG 159
L++ R N + + ++++ GY P + +N ++ LCK ++ DA F E ++G
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG 220
Query: 160 LHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAE 219
+ V++ L+NG C + + RL S M + P+V TYSAL++ K ++ +A+
Sbjct: 221 IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAK 280
Query: 220 LLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYT 279
L EM + P+ V +++LI+G C + RID EA ++ D M + G D ++Y
Sbjct: 281 ELFEEMVRMSIDPDIVTYSSLINGLCLHDRID------EANQMFDLMVSKGCLADVVSYN 334
Query: 280 ILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKV 339
L++GFCK +E + + +EM +RG+ + V + LI GF + G V +A+ +M
Sbjct: 335 TLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFF 394
Query: 340 GLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNA 399
G+ PD TY +++ C NG+ + + ++M+ + TY ++ G+CK G+++ A
Sbjct: 395 GISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEA 454
Query: 400 NMLLDTMLDLGVVPDDITYNILLEGHCKHG 429
L ++ G+ PD +TY ++ G C G
Sbjct: 455 WSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/348 (30%), Positives = 181/348 (52%), Gaps = 13/348 (3%)
Query: 111 TVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTL 170
++LG +E+L G +Y FN++++ C ++ A + + K G V+ +L
Sbjct: 104 VISLGKKMEVL--GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSL 161
Query: 171 INGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGL 230
+NG C+ + + L M G +PD+ Y+A+I+ LCK R++DA E+ +G+
Sbjct: 162 VNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGI 221
Query: 231 TPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGD 290
PN V +T L++G C + R +A +++ +M + P+ ITY+ LLD F K G
Sbjct: 222 RPNVVTYTALVNGLCNSSR------WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK 275
Query: 291 LESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTM 350
+ A ++ +EM++ I+ D V +++LI+G C ++ EA +M M+ G D +Y
Sbjct: 276 VLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNT 335
Query: 351 VIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLG 410
+I+ FCK + G +L +EM G + TYN L+ G + G + A M G
Sbjct: 336 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG 395
Query: 411 VVPDDITYNILLEGHCKHGNPED----FDKLQSEKGLVSDYACYTSLV 454
+ PD TYNILL G C +G E F+ +Q ++ + D YT+++
Sbjct: 396 ISPDIWTYNILLGGLCDNGELEKALVIFEDMQ-KREMDLDIVTYTTVI 442
Score = 182 bits (463), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 104/317 (32%), Positives = 170/317 (53%), Gaps = 9/317 (2%)
Query: 141 KEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVY 200
++ K+ DA +F + K + V FN L++ K K D L ME G+R D+Y
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 201 TYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEAR 260
T++ +IN C ++ A +L +M + G P+ V +L++G C+ R+ +A
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVS------DAV 175
Query: 261 KIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGF 320
+VD+M G PD + Y ++D CK + A D KE+ ++GI + V +TAL++G
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235
Query: 321 CRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAV 380
C + +A R+L +M+K + P+ TY+ ++D F KNG L +EM P +
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295
Query: 381 ETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPEDFDKL--- 437
TY++L+NGLC H ++ AN + D M+ G + D ++YN L+ G CK ED KL
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 355
Query: 438 QSEKGLVSDYACYTSLV 454
S++GLVS+ Y +L+
Sbjct: 356 MSQRGLVSNTVTYNTLI 372
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 173/347 (49%), Gaps = 35/347 (10%)
Query: 75 LDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNV 134
++DA F+ + + R L++ + ++ + +++ +P+V ++
Sbjct: 206 VNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSA 265
Query: 135 LMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSG 194
L+ K GK+ +A+ +F+E + + V++++LING C +DE ++ +M G
Sbjct: 266 LLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG 325
Query: 195 MRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAG 254
DV +Y+ LING CK R++D L EM +RGL N V + TLI G + AG
Sbjct: 326 CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ------AG 379
Query: 255 DMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFT 314
D+ +A++ +M G++PD TY ILL G C G+LE AL I ++M KR ++LD V +T
Sbjct: 380 DVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYT 439
Query: 315 ALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVI---------------------- 352
+I G C+ GKV EA + + GLKPD TYT ++
Sbjct: 440 TVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQE 499
Query: 353 -----DCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHG 394
DC +GD L+K+M S G+ P++ + +G+CK
Sbjct: 500 GLMKNDCTLSDGDITLSAELIKKMLSCGYAPSL--LKDIKSGVCKKA 544
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 204 bits (518), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 111/333 (33%), Positives = 179/333 (53%), Gaps = 14/333 (4%)
Query: 113 TLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLIN 172
+ + ++++ G +P V FN L++ LC EG++ +A + ++ +GLH V++ T++N
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 173 GHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTP 232
G CK + L S ME + ++PDV YSA+I+ LCK+ DA+ L EM E+G+ P
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 233 NDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLE 292
N + +IDG C GR +A++++ +M +NPD +T+ L+ KEG L
Sbjct: 330 NVFTYNCMIDGFCSFGR------WSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 293 SALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVI 352
A + EM+ R I D V + ++I GFC+ + +A+ M M PD T+ +I
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTII 439
Query: 353 DCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVV 412
D +C+ G +LL+E+ G + TYN L++G C+ L A L M+ GV
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499
Query: 413 PDDITYNILLEGHCKHGNPED----FDKLQSEK 441
PD IT NILL G C++ E+ F+ +Q K
Sbjct: 500 PDTITCNILLYGFCENEKLEEALELFEVIQMSK 532
Score = 183 bits (464), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/454 (27%), Positives = 212/454 (46%), Gaps = 48/454 (10%)
Query: 25 QARDLLHLIVSKKGMGSSASLFASILE------TRGTHLPGLVLDALMIVYVDLGFLDDA 78
+R L+H V++KG S SL E G+H LDDA
Sbjct: 45 NSRRLIHGRVAEKGTKSLPSLTQVTFEGEELKLKSGSHY--------------FKSLDDA 90
Query: 79 IQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNVLMHK 138
I F + + A C +I +R N P V + Y ++ ++Y FN+L+
Sbjct: 91 IDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKC 150
Query: 139 LCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGS----- 193
C K+ + F + K G V+FNTL++G C + E L M +
Sbjct: 151 FCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEA 210
Query: 194 ----------GMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDG 243
G+ P V T++ LINGLC E R+ +A L+++M +GL + V + T+++G
Sbjct: 211 VALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNG 270
Query: 244 HCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIK 303
CK GD K A ++ +M + PD + Y+ ++D CK+G A + EM++
Sbjct: 271 MCK------MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 304 RGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKT 363
+GI + + +I GFC G+ +A+R+LR+M++ + PD T+ +I K G
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Query: 364 GFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLE 423
+L EM P TYN+++ G CKH + +A M DL PD +T+N +++
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKH----MFDLMASPDVVTFNTIID 440
Query: 424 GHCKHGNPEDFDKLQSE---KGLVSDYACYTSLV 454
+C+ ++ +L E +GLV++ Y +L+
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 474
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 172/341 (50%), Gaps = 10/341 (2%)
Query: 100 LIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRG 159
+IDR+ + + + E+L+ G +P+V+ +N ++ C G+ DAQ + + +R
Sbjct: 302 IIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE 361
Query: 160 LHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAE 219
++ ++FN LI+ K L E +L M + PD TY+++I G CK NR DDA+
Sbjct: 362 INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAK 421
Query: 220 LLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYT 279
+ M +P+ V F T+ID +C+ R+D E +++ E+ GL + TY
Sbjct: 422 HMFDLMA----SPDVVTFNTIIDVYCRAKRVD------EGMQLLREISRRGLVANTTTYN 471
Query: 280 ILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKV 339
L+ GFC+ +L +A D+ +EMI G+ D + L+ GFC K+ EA + +
Sbjct: 472 TLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMS 531
Query: 340 GLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNA 399
+ D Y ++I CK + L + G P V+TYN +++G C + +A
Sbjct: 532 KIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDA 591
Query: 400 NMLLDTMLDLGVVPDDITYNILLEGHCKHGNPEDFDKLQSE 440
N+L M D G PD+ TYN L+ G K G + +L SE
Sbjct: 592 NVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 632
Score = 168 bits (425), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 158/303 (52%), Gaps = 10/303 (3%)
Query: 119 EILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAK 178
++++ +P V FN L+ KEGK+ +A+ + DE R + V++N++I G CK
Sbjct: 356 DMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN 415
Query: 179 NLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFT 238
D+ + +M PDV T++ +I+ C+ R+D+ LL E+ RGL N +
Sbjct: 416 RFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYN 471
Query: 239 TLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIR 298
TLI G C+ ++ A D+ + EM ++G+ PD IT ILL GFC+ LE AL++
Sbjct: 472 TLIHGFCEVDNLNAAQDLFQ------EMISHGVCPDTITCNILLYGFCENEKLEEALELF 525
Query: 299 KEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKN 358
+ + I+LD VA+ +I G C+G KV EA + + G++PD TY ++I FC
Sbjct: 526 EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGK 585
Query: 359 GDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITY 418
L +M+ +GH P TYN L+ G K G++ + L+ M G D T
Sbjct: 586 SAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTI 645
Query: 419 NIL 421
++
Sbjct: 646 KMV 648
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 203 bits (517), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 124/384 (32%), Positives = 202/384 (52%), Gaps = 11/384 (2%)
Query: 76 DDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNVL 135
DDA+ F+ + + R L + RT + L ++ G + ++Y +++
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 136 MHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGM 195
++ C+ K+ A + K G V+F+TLING C + E L M G
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 196 RPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGD 255
+P + T +AL+NGLC ++ DA LL+ M E G PN+V + ++ CK+G+ +A
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA-- 231
Query: 256 MKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTA 315
M+ RK M + D + Y+I++DG CK+G L++A ++ EM +G + D + +T
Sbjct: 232 MELLRK----MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTT 287
Query: 316 LISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDG 375
LI GFC G+ + ++LR+M+K + PD ++ +IDCF K G + L KEM G
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG 347
Query: 376 HLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPED-- 433
P TY +L++G CK QL AN +LD M+ G P+ T+NIL+ G+CK +D
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGL 407
Query: 434 --FDKLQSEKGLVSDYACYTSLVS 455
F K+ S +G+V+D Y +L+
Sbjct: 408 ELFRKM-SLRGVVADTVTYNTLIQ 430
Score = 202 bits (514), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 110/326 (33%), Positives = 178/326 (54%), Gaps = 10/326 (3%)
Query: 120 ILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKN 179
+++ G+ P++ N L++ LC GK+ DA ++ D + G V++ ++ CK+
Sbjct: 168 MVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQ 227
Query: 180 LDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTT 239
L ME ++ D YS +I+GLCK+ LD+A L +EM +G + +I+TT
Sbjct: 228 TALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTT 287
Query: 240 LIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRK 299
LI G C GR D + K++ +M + PD + ++ L+D F KEG L A ++ K
Sbjct: 288 LIRGFCYAGRWD------DGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHK 341
Query: 300 EMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNG 359
EMI+RGI D V +T+LI GFC+ ++ +A ML M+ G P+ T+ ++I+ +CK
Sbjct: 342 EMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKAN 401
Query: 360 DTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYN 419
G L ++M G + TYN L+ G C+ G+L+ A L M+ V PD ++Y
Sbjct: 402 LIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYK 461
Query: 420 ILLEGHCKHGNPED----FDKLQSEK 441
ILL+G C +G PE F+K++ K
Sbjct: 462 ILLDGLCDNGEPEKALEIFEKIEKSK 487
Score = 195 bits (496), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 122/431 (28%), Positives = 221/431 (51%), Gaps = 27/431 (6%)
Query: 9 AYSTMVHFLVAHKMHSQARDLLHLIVSKKGMGSSASLFASILETRGTHLPGLVLDALMIV 68
+ST+++ L S+A +L+ +V MG +L G L G V DA++++
Sbjct: 144 TFSTLINGLCLEGRVSEALELVDRMVE---MGHKPTLITLNALVNGLCLNGKVSDAVLLI 200
Query: 69 --YVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYLEILDYGYS 126
V+ GF + + +L+ M ++ + + ++ +
Sbjct: 201 DRMVETGFQPNEVTYGPVLKV----------------MCKSGQTALAMELLRKMEERKIK 244
Query: 127 PSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRL 186
+++++ LCK+G + +A +F+E +G A + + TLI G C A D+G +L
Sbjct: 245 LDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKL 304
Query: 187 KSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCK 246
M + PDV +SALI+ KE +L +AE L EM +RG++P+ V +T+LIDG CK
Sbjct: 305 LRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCK 364
Query: 247 NGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGI 306
++D A M +D M + G P+ T+ IL++G+CK ++ L++ ++M RG+
Sbjct: 365 ENQLDKANHM------LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418
Query: 307 ELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFR 366
D V + LI GFC GK+ A+ + +EM+ ++PD +Y +++D C NG+ +
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478
Query: 367 LLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHC 426
+ +++ + YN +++G+C ++ +A L ++ GV PD TYNI++ G C
Sbjct: 479 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLC 538
Query: 427 KHGNPEDFDKL 437
K G+ + D L
Sbjct: 539 KKGSLSEADLL 549
Score = 173 bits (438), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 159/298 (53%), Gaps = 6/298 (2%)
Query: 126 SPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFR 185
+P V F+ L+ KEGK+++A+ + E +RG+ V++ +LI+G CK LD+
Sbjct: 314 TPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANH 373
Query: 186 LKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHC 245
+ +M G P++ T++ LING CK N +DD L +M RG+ + V + TLI G C
Sbjct: 374 MLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 433
Query: 246 KNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRG 305
+ G++++A +++ EM + + PD ++Y ILLDG C G+ E AL+I +++ K
Sbjct: 434 ELGKLEVA------KELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487
Query: 306 IELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGF 365
+ELD + +I G C KV +A + + G+KPD TY ++I CK G
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEAD 547
Query: 366 RLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLE 423
L ++M DGH P TYN L+ G + L++ + G D T ++++
Sbjct: 548 LLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVD 605
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 109/267 (40%), Gaps = 24/267 (8%)
Query: 9 AYSTMVHFLVAHKMHSQARDLLHLIVSKKGMGSSASLFASILET--------------RG 54
Y++++ +A +L L+VSK G G + F ++ R
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSK-GCGPNIRTFNILINGYCKANLIDDGLELFRK 412
Query: 55 THLPGLVLDA-----LMIVYVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNL 109
L G+V D L+ + +LG L+ A + F+ + R + L+D +
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGE 472
Query: 110 PTVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNT 169
P L + +I + ++N+++H +C K+ DA +F +G+ ++N
Sbjct: 473 PEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNI 532
Query: 170 LINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERG 229
+I G CK +L E L ME G P+ TY+ LI E + L+ E+ G
Sbjct: 533 MIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCG 592
Query: 230 LTPN----DVIFTTLIDGHCKNGRIDM 252
+ + ++ L DG K +DM
Sbjct: 593 FSVDASTVKMVVDMLSDGRLKKSFLDM 619
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 203 bits (517), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 201/410 (49%), Gaps = 36/410 (8%)
Query: 50 LETRGTHLPGLVLDALMIVYVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNL 109
LET+ T ++ D L+ L +D+AI+CF L+++ F C ++ + R N
Sbjct: 150 LETKST----ILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNR 205
Query: 110 PTVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNT 169
FY ++ +VY FN++++ LCKEGK+K A+ G+ T V++NT
Sbjct: 206 IENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNT 265
Query: 170 LINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERG 229
L+ G ++ + S M+ G +PD+ TY+ +++ +C E R A +L EM E G
Sbjct: 266 LVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIG 322
Query: 230 LTPNDVIFTTLIDGHCKNGRIDMA-----------------------------GDMKEAR 260
L P+ V + LI G NG ++MA ++ A
Sbjct: 323 LVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAE 382
Query: 261 KIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGF 320
++ E+ G+ D +TY IL++G+C+ GD + A + EM+ GI+ +T+LI
Sbjct: 383 ILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVL 442
Query: 321 CRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAV 380
CR K EA+ + +++ G+KPD ++D C G+ F LLKEM P
Sbjct: 443 CRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDD 502
Query: 381 ETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGN 430
TYN LM GLC G+ + A L+ M G+ PD I+YN L+ G+ K G+
Sbjct: 503 VTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGD 552
Score = 189 bits (480), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 113/349 (32%), Positives = 189/349 (54%), Gaps = 12/349 (3%)
Query: 119 EILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAK 178
E+ G+ P + +N ++ +C EG+ A V E + GL +VS+N LI G
Sbjct: 285 EMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNG 341
Query: 179 NLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFT 238
+L+ F + M GM P YTY+ LI+GL EN+++ AE+L+ E+ E+G+ + V +
Sbjct: 342 DLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYN 401
Query: 239 TLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIR 298
LI+G+C++G D K+A + DEM T+G+ P + TYT L+ C++ A ++
Sbjct: 402 ILINGYCQHG------DAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELF 455
Query: 299 KEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKN 358
++++ +G++ D V L+ G C G + A +L+EM + + PDD TY ++ C
Sbjct: 456 EKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGE 515
Query: 359 GDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITY 418
G + L+ EM+ G P +YN L++G K G K+A M+ D ML LG P +TY
Sbjct: 516 GKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTY 575
Query: 419 NILLEGHCKHGNPEDFDKLQSE---KGLVSDYACYTSLVSKSSKYRQKR 464
N LL+G K+ E ++L E +G+V + + + S++ S K+
Sbjct: 576 NALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNLDAKK 624
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 13/184 (7%)
Query: 116 FYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHC 175
+ +++ G P + + N LM C G + A + E ++ V++N L+ G C
Sbjct: 454 LFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLC 513
Query: 176 KAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDV 235
+E L M+ G++PD +Y+ LI+G K+ A ++ EM G P +
Sbjct: 514 GEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLL 573
Query: 236 IFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESAL 295
+ L+ G KN ++ A +++ EM + G+ P+ FC + S L
Sbjct: 574 TYNALLKGLSKNQEGEL------AEELLREMKSEGIVPND-------SSFCSVIEAMSNL 620
Query: 296 DIRK 299
D +K
Sbjct: 621 DAKK 624
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 203 bits (517), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 125/439 (28%), Positives = 216/439 (49%), Gaps = 27/439 (6%)
Query: 7 LHAYSTMVHFLVAHKMHSQARDLLHLIVSKKGMGSSASLFASILETRGTH---------- 56
+ +Y+ ++ L +A +LLH++ +G GS + + G
Sbjct: 158 VFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYS 217
Query: 57 ----------LPGLV-LDALMIVYVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMM 105
LP +V ++++ +D A++ + K+ ++
Sbjct: 218 TYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 277
Query: 106 RTNLPTVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAV 165
+ P +GF ++ G P V +++LM LCK G+ +A+ +FD KRGL
Sbjct: 278 SSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEIT 337
Query: 166 SFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEM 225
++ TL+ G+ L E L +M +G+ PD Y +S LI K+ ++D A L+ +M
Sbjct: 338 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKM 397
Query: 226 CERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGF 285
++GL PN V + +I CK+GR++ +A ++M GL+P I Y L+ G
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKSGRVE------DAMLYFEQMIDEGLSPGNIVYNSLIHGL 451
Query: 286 CKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDD 345
C E A ++ EM+ RGI L+ + F ++I C+ G+V+E+E++ M+++G+KP+
Sbjct: 452 CTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNV 511
Query: 346 ATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDT 405
TY +I+ +C G +LL M S G P TY+ L+NG CK ++++A +L
Sbjct: 512 ITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKE 571
Query: 406 MLDLGVVPDDITYNILLEG 424
M GV PD ITYNI+L+G
Sbjct: 572 MESSGVSPDIITYNIILQG 590
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/314 (31%), Positives = 164/314 (52%), Gaps = 6/314 (1%)
Query: 124 GYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEG 183
G P V + +++ KEG A + E RG+ V++N++I CKA+ +D+
Sbjct: 191 GSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKA 250
Query: 184 FRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDG 243
+ + M +G+ PD TY+++++G C + +A L +M G+ P+ V ++ L+D
Sbjct: 251 MEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDY 310
Query: 244 HCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIK 303
CKNGR EARKI D M GL P+ TY LL G+ +G L + M++
Sbjct: 311 LCKNGRC------MEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR 364
Query: 304 RGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKT 363
GI D+ F+ LI + + GKV +A + +M + GL P+ TY VI CK+G +
Sbjct: 365 NGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVED 424
Query: 364 GFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLE 423
++M +G P YN+L++GLC + + A L+ MLD G+ + I +N +++
Sbjct: 425 AMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIID 484
Query: 424 GHCKHGNPEDFDKL 437
HCK G + +KL
Sbjct: 485 SHCKEGRVIESEKL 498
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/379 (29%), Positives = 180/379 (47%), Gaps = 34/379 (8%)
Query: 117 YLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCK 176
Y E+LD G P V +N ++ LCK + A V + K G+ +++N++++G+C
Sbjct: 219 YHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCS 278
Query: 177 AKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVI 236
+ E M G+ PDV TYS L++ LCK R +A + M +RGL P
Sbjct: 279 SGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITT 338
Query: 237 FTTLIDGHCKNGR-IDM----------------------------AGDMKEARKIVDEMC 267
+ TL+ G+ G ++M G + +A + +M
Sbjct: 339 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMR 398
Query: 268 TNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVV 327
GLNP+ +TY ++ CK G +E A+ ++MI G+ N+ + +LI G C K
Sbjct: 399 QQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWE 458
Query: 328 EAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALM 387
AE ++ EML G+ + + +ID CK G +L + M G P V TYN L+
Sbjct: 459 RAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLI 518
Query: 388 NGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPED----FDKLQSEKGL 443
NG C G++ A LL M+ +G+ P+ +TY+ L+ G+CK ED F +++S G+
Sbjct: 519 NGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMES-SGV 577
Query: 444 VSDYACYTSLVSKSSKYRQ 462
D Y ++ + R+
Sbjct: 578 SPDIITYNIILQGLFQTRR 596
Score = 175 bits (444), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 176/330 (53%), Gaps = 9/330 (2%)
Query: 124 GYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEG 183
G P YVF++L+ K+GK+ A +VF + ++GL+ AV++ +I CK+ +++
Sbjct: 366 GIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDA 425
Query: 184 FRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDG 243
M G+ P Y++LI+GLC N+ + AE L+ EM +RG+ N + F ++ID
Sbjct: 426 MLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDS 485
Query: 244 HCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIK 303
HCK GR+ E+ K+ + M G+ P+ ITY L++G+C G ++ A+ + M+
Sbjct: 486 HCKEGRV------IESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVS 539
Query: 304 RGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKT 363
G++ + V ++ LI+G+C+ ++ +A + +EM G+ PD TY +++ + T
Sbjct: 540 VGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAA 599
Query: 364 GFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLE 423
L + G + TYN +++GLCK+ +A + + + + + T+NI+++
Sbjct: 600 AKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMID 659
Query: 424 GHCKHGNPEDFDKL---QSEKGLVSDYACY 450
K G ++ L S GLV +Y Y
Sbjct: 660 ALLKVGRNDEAKDLFVAFSSNGLVPNYWTY 689
Score = 165 bits (417), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 206/439 (46%), Gaps = 26/439 (5%)
Query: 10 YSTMVHFLVAHKMHSQARDLLHLIVSKKGMGSSASLFASILE------------------ 51
YS ++ +L + +AR + + +K+G+ + + ++L+
Sbjct: 304 YSLLMDYLCKNGRCMEARKIFDSM-TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 362
Query: 52 -TRGTHLPGLVLDALMIVYVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLP 110
G H V L+ Y G +D A+ F +R+ A +I + ++
Sbjct: 363 VRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRV 422
Query: 111 TVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTL 170
+ ++ +++D G SP V+N L+H LC K + A+ + E RG+ + FN++
Sbjct: 423 EDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSI 482
Query: 171 INGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGL 230
I+ HCK + E +L +M G++P+V TY+ LING C ++D+A LL M GL
Sbjct: 483 IDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGL 542
Query: 231 TPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGD 290
PN V ++TLI+G+CK R M++A + EM ++G++PD ITY I+L G +
Sbjct: 543 KPNTVTYSTLINGYCKISR------MEDALVLFKEMESSGVSPDIITYNIILQGLFQTRR 596
Query: 291 LESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTM 350
+A ++ + + G +++ + ++ G C+ +A +M + + + LK + T+ +
Sbjct: 597 TAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNI 656
Query: 351 VIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLG 410
+ID K G L S+G +P TY + + G L+ + L +M D G
Sbjct: 657 MIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 716
Query: 411 VVPDDITYNILLEGHCKHG 429
D N ++ + G
Sbjct: 717 CTVDSGMLNFIVRELLQRG 735
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/318 (31%), Positives = 159/318 (50%), Gaps = 14/318 (4%)
Query: 119 EILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATA---VSFNTLINGHC 175
E+L G S+Y N + + ++ A ++ + G ++ LI C
Sbjct: 40 ELLRRGRGASIYGLNRALADVARDSPAA-AVSRYNRMARAGADEVTPDLCTYGILIGCCC 98
Query: 176 KAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDA-ELLLHEMCERGLTPND 234
+A LD GF + G R D ++ L+ GLC + R DA +++L M E G PN
Sbjct: 99 RAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNV 158
Query: 235 VIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTN---GLNPDKITYTILLDGFCKEGDL 291
+ L+ G C R +EA +++ M + G PD ++YT +++GF KEGD
Sbjct: 159 FSYNILLKGLCDENR------SQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDS 212
Query: 292 ESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMV 351
+ A EM+ RGI D V + ++I+ C+ + +A +L M+K G+ PD TY +
Sbjct: 213 DKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSI 272
Query: 352 IDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGV 411
+ +C +G K LK+MRSDG P V TY+ LM+ LCK+G+ A + D+M G+
Sbjct: 273 LHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGL 332
Query: 412 VPDDITYNILLEGHCKHG 429
P+ TY LL+G+ G
Sbjct: 333 KPEITTYGTLLQGYATKG 350
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 175/374 (46%), Gaps = 7/374 (1%)
Query: 35 SKKGMGSSASLFASILETRGTHLPGLVLDALMIVYVDLGFLDDAIQCFRLLRKHYFRIPA 94
+K+G A L S + +G + + A++ + G ++DA+ F +
Sbjct: 382 AKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 441
Query: 95 RGCRCLIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDE 154
LI + N LE+LD G + FN ++ CKEG++ +++ +F+
Sbjct: 442 IVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFEL 501
Query: 155 FGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENR 214
+ G+ +++NTLING+C A +DE +L S M G++P+ TYS LING CK +R
Sbjct: 502 MVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISR 561
Query: 215 LDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPD 274
++DA +L EM G++P+ + + ++ G + R A+++ + +G +
Sbjct: 562 MEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRT------AAAKELYVRITESGTQIE 615
Query: 275 KITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLR 334
TY I+L G CK + AL + + + ++L+ F +I + G+ EA+ +
Sbjct: 616 LSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFV 675
Query: 335 EMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHG 394
GL P+ TY ++ + G + +L M +G N ++ L + G
Sbjct: 676 AFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 735
Query: 395 QLKNANMLLDTMLD 408
++ A L +M+D
Sbjct: 736 EITRAGTYL-SMID 748
Score = 89.0 bits (219), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 115/276 (41%), Gaps = 30/276 (10%)
Query: 124 GYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEG 183
G P+V +N L++ C GK+ +A + GL V+++TLING+CK +++
Sbjct: 506 GVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDA 565
Query: 184 FRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDG 243
L ME SG+ PD+ TY+ ++ GL + R A+ L + E G + ++ G
Sbjct: 566 LVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHG 625
Query: 244 HCKNGRIDMA-----------------------------GDMKEARKIVDEMCTNGLNPD 274
CKN D A G EA+ + +NGL P+
Sbjct: 626 LCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 685
Query: 275 KITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLR 334
TY ++ + +G LE + M G +D+ ++ + G++ A L
Sbjct: 686 YWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLS 745
Query: 335 EMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKE 370
+ + + +T ++ ID G + +R L E
Sbjct: 746 MIDEKHFSLEASTASLFID-LLSGGKYQEYYRFLPE 780
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 203 bits (516), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 139/454 (30%), Positives = 220/454 (48%), Gaps = 30/454 (6%)
Query: 7 LHAYSTMVHFLVAHKMHSQARDLLHLIVSKKGMGSSASLFASILE--TRGTHLPGLVLDA 64
L+ Y+ +++ S A LL ++ K G S +S+L G + V A
Sbjct: 120 LYTYNILINCFCRRSQISLALALLGKMM-KLGYEPSIVTLSSLLNGYCHGKRISDAV--A 176
Query: 65 LMIVYVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYLEILDYG 124
L+ V++G+ D I L+ + A L+DRM++ G
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR----------------G 220
Query: 125 YSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGF 184
P++ + V+++ LCK G A + ++ + A V FNT+I+ CK +++D+
Sbjct: 221 CQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 280
Query: 185 RLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGH 244
L ME G+RP+V TYS+LI+ LC R DA LL +M E+ + PN V F LID
Sbjct: 281 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 340
Query: 245 CKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKR 304
K G+ EA K+ D+M ++PD TY L++GFC L+ A + + M+ +
Sbjct: 341 VKEGKF------VEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSK 394
Query: 305 GIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTG 364
D V + LI GFC+ +V + + REM GL D TYT +I +GD
Sbjct: 395 DCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA 454
Query: 365 FRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEG 424
++ K+M SDG P + TY+ L++GLC +G+L+ A + D M + D Y ++EG
Sbjct: 455 QKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEG 514
Query: 425 HCKHGNPEDFDKL---QSEKGLVSDYACYTSLVS 455
CK G +D L S KG+ + Y +++S
Sbjct: 515 MCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 548
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 201/437 (45%), Gaps = 24/437 (5%)
Query: 3 FRLTLHAYSTMVHFLVAHKMHSQARDLLHLIVS------------------KKGMGSSAS 44
+R ++T++H L H S+A L+ +V K+G A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 45 LFASILETRGTHLPGLVLDALMIVYVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRM 104
+ +E ++ + ++ +DDA+ F+ + R LI +
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Query: 105 MRTNLPTVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATA 164
+ ++++ +P++ FN L+ KEGK +A+ ++D+ KR +
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365
Query: 165 VSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHE 224
++N+L+NG C LD+ ++ M PDV TY+ LI G CK R++D L E
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 425
Query: 225 MCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDG 284
M RGL + V +TTLI G +G D A+K+ +M ++G+ PD +TY+ILLDG
Sbjct: 426 MSHRGLVGDTVTYTTLIQGLFHDG------DCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479
Query: 285 FCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPD 344
C G LE AL++ M K I+LD +T +I G C+ GKV + + + G+KP+
Sbjct: 480 LCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 539
Query: 345 DATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLD 404
TY +I C + + LLK+M+ DG LP TYN L+ + G + L+
Sbjct: 540 VVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIR 599
Query: 405 TMLDLGVVPDDITYNIL 421
M V D T ++
Sbjct: 600 EMRSCRFVGDASTIGLV 616
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 169/379 (44%), Gaps = 67/379 (17%)
Query: 144 KIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYS 203
K+ DA +F K + V FN L++ K K D L M+ + +YTY+
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 204 ALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMA---------- 253
LIN C+ +++ A LL +M + G P+ V ++L++G+C RI A
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 254 -------------------GDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGD---- 290
EA +VD M G P+ +TY ++++G CK GD
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 291 -------------------------------LESALDIRKEMIKRGIELDNVAFTALISG 319
++ AL++ KEM +GI + V +++LIS
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 320 FCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPA 379
C G+ +A ++L +M++ + P+ T+ +ID F K G +L +M P
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364
Query: 380 VETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPEDFDKL-- 437
+ TYN+L+NG C H +L A + + M+ PD +TYN L++G CK ED +L
Sbjct: 365 IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR 424
Query: 438 -QSEKGLVSDYACYTSLVS 455
S +GLV D YT+L+
Sbjct: 425 EMSHRGLVGDTVTYTTLIQ 443
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 105/221 (47%), Gaps = 7/221 (3%)
Query: 246 KNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRG 305
+NG DM D +A + M + P + + LL K + + + ++M +
Sbjct: 58 RNGLHDMKLD--DAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLE 115
Query: 306 IELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGF 365
I + LI+ FCR ++ A +L +M+K+G +P T + +++ +C
Sbjct: 116 IVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 175
Query: 366 RLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGH 425
L+ +M G+ P T+ L++GL H + A L+D M+ G P+ +TY +++ G
Sbjct: 176 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 235
Query: 426 CKHGNPE----DFDKLQSEKGLVSDYACYTSLVSKSSKYRQ 462
CK G+ + +K+++ K + +D + +++ KYR
Sbjct: 236 CKRGDTDLALNLLNKMEAAK-IEADVVIFNTIIDSLCKYRH 275
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 202 bits (515), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 114/360 (31%), Positives = 195/360 (54%), Gaps = 32/360 (8%)
Query: 127 PSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRL 186
PSV+++NVL+ LCK ++ DA+ +FDE R L + +++NTLI+G+CKA N ++ F++
Sbjct: 212 PSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKV 271
Query: 187 KSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCK 246
+ M+ + P + T++ L+ GL K ++DAE +L EM + G P+ F+ L DG+
Sbjct: 272 RERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSS 331
Query: 247 NGRIDMA-----------------------------GDMKEARKIVDEMCTNGLNPDKIT 277
N + + A G +++A +I+ GL P+++
Sbjct: 332 NEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVI 391
Query: 278 YTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREML 337
Y ++DG+C++GDL A + M K+G++ D++A+ LI FC G++ AE+ + +M
Sbjct: 392 YNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMK 451
Query: 338 KVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLK 397
G+ P TY ++I + + + F +LKEM +G +P V +Y L+N LCK +L
Sbjct: 452 LKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLL 511
Query: 398 NANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPED---FDKLQSEKGLVSDYACYTSLV 454
A ++ M D GV P YN+L++G C G ED F K +KG+ + Y +L+
Sbjct: 512 EAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLI 571
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/333 (32%), Positives = 167/333 (50%), Gaps = 29/333 (8%)
Query: 127 PSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRL 186
PS+ FN L+ L K G ++DA+ V E G A +F+ L +G+ + + +
Sbjct: 282 PSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGV 341
Query: 187 KSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCK 246
SG++ + YT S L+N LCKE +++ AE +L +GL PN+VI+ T+IDG+C+
Sbjct: 342 YETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCR 401
Query: 247 NG-----------------------------RIDMAGDMKEARKIVDEMCTNGLNPDKIT 277
G R G+M+ A K V++M G++P T
Sbjct: 402 KGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVET 461
Query: 278 YTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREML 337
Y IL+ G+ ++ + + DI KEM G + V++ LI+ C+G K++EA+ + R+M
Sbjct: 462 YNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDME 521
Query: 338 KVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLK 397
G+ P Y M+ID C G + FR KEM G + TYN L++GL G+L
Sbjct: 522 DRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLS 581
Query: 398 NANMLLDTMLDLGVVPDDITYNILLEGHCKHGN 430
A LL + G+ PD TYN L+ G+ GN
Sbjct: 582 EAEDLLLEISRKGLKPDVFTYNSLISGYGFAGN 614
Score = 171 bits (434), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 126/431 (29%), Positives = 205/431 (47%), Gaps = 39/431 (9%)
Query: 58 PGLV-LDALMIVYVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGF 116
P L+ + L+ G ++DA + ++ F A L D LG
Sbjct: 282 PSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGV 341
Query: 117 YLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCK 176
Y +D G + Y ++L++ LCKEGKI+ A+ + +GL V +NT+I+G+C+
Sbjct: 342 YETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCR 401
Query: 177 AKNLDEGFRLK-SVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDV 235
+L G R+K ME GM+PD Y+ LI C+ +++AE +++M +G++P+
Sbjct: 402 KGDL-VGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVE 460
Query: 236 IFTTLIDGHCKNGRIDMAGD-----------------------------MKEARKIVDEM 266
+ LI G+ + D D + EA+ + +M
Sbjct: 461 TYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDM 520
Query: 267 CTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKV 326
G++P Y +L+DG C +G +E A KEM+K+GIEL+ V + LI G GK+
Sbjct: 521 EDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKL 580
Query: 327 VEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNAL 386
EAE +L E+ + GLKPD TY +I + G+ + L +EM+ G P ++TY+ L
Sbjct: 581 SEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLL 640
Query: 387 MNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPEDFDKLQS---EKGL 443
++ LC ++ L M + PD + YN +L + HG+ E LQ EK +
Sbjct: 641 IS-LCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSI 696
Query: 444 VSDYACYTSLV 454
D Y SL+
Sbjct: 697 GLDKTTYNSLI 707
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 182/375 (48%), Gaps = 41/375 (10%)
Query: 124 GYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEG 183
G P +N L+ + C+ G++++A+ ++ +G+ + ++N LI G+ + D+
Sbjct: 419 GMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKC 478
Query: 184 FRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDG 243
F + ME +G P+V +Y LIN LCK ++L +A+++ +M +RG++P I+ LIDG
Sbjct: 479 FDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDG 538
Query: 244 HCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIK 303
C G+I+ +A + EM G+ + +TY L+DG G L A D+ E+ +
Sbjct: 539 CCSKGKIE------DAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISR 592
Query: 304 RGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVID---------- 353
+G++ D + +LISG+ G V + EM + G+KP TY ++I
Sbjct: 593 KGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELT 652
Query: 354 ---------------------CFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCK 392
C+ +GD + F L K+M TYN+L+ G K
Sbjct: 653 ERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLK 712
Query: 393 HGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCK---HGNPEDFDKLQSEKGLVSDYAC 449
G+L L+D M + P+ TYNI+++GHC+ + + + + EKG + D
Sbjct: 713 VGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCI 772
Query: 450 YTSLVSK-SSKYRQK 463
LVS ++R K
Sbjct: 773 GNELVSGLKEEWRSK 787
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 179/392 (45%), Gaps = 69/392 (17%)
Query: 75 LDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNV 134
+ +A F LR + L+D +++T VT+ +L IL+ + PS +++
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMY-- 182
Query: 135 LMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSG 194
GK A + + GK G L + M+
Sbjct: 183 --------GKAIQAAVKLSDVGK-------------------------GLELFNRMKHDR 209
Query: 195 MRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRID--- 251
+ P V+ Y+ LI+GLCK R++DAE L EM R L P+ + + TLIDG+CK G +
Sbjct: 210 IYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSF 269
Query: 252 --------------------------MAGDMKEARKIVDEMCTNGLNPDKITYTILLDGF 285
AG +++A ++ EM G PD T++IL DG+
Sbjct: 270 KVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGY 329
Query: 286 CKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERML-REMLKVGLKPD 344
E+AL + + + G++++ + L++ C+ GK+ +AE +L REM K GL P+
Sbjct: 330 SSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAK-GLVPN 388
Query: 345 DATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLD 404
+ Y +ID +C+ GD ++ M G P YN L+ C+ G+++NA ++
Sbjct: 389 EVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVN 448
Query: 405 TMLDLGVVPDDITYNILLEGHCKHGNPEDFDK 436
M GV P TYNIL+ G +G +FDK
Sbjct: 449 KMKLKGVSPSVETYNILIGG---YGRKYEFDK 477
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 144/298 (48%), Gaps = 7/298 (2%)
Query: 134 VLMHKLCKEGK-IKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEG 192
+L+ L E K I +A +F G++ ++ S L++ K K + +
Sbjct: 113 LLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILE 172
Query: 193 SGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDM 252
S RP + Y I K + + L + M + P+ I+ LIDG CK R
Sbjct: 173 SDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKR--- 229
Query: 253 AGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVA 312
M +A ++ DEM L P ITY L+DG+CK G+ E + +R+ M IE +
Sbjct: 230 ---MNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLIT 286
Query: 313 FTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMR 372
F L+ G + G V +AE +L+EM +G PD T++++ D + N + + +
Sbjct: 287 FNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAV 346
Query: 373 SDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGN 430
G T + L+N LCK G+++ A +L + G+VP+++ YN +++G+C+ G+
Sbjct: 347 DSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGD 404
Score = 136 bits (342), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 154/313 (49%), Gaps = 25/313 (7%)
Query: 119 EILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAK 178
E+ D G P+V + L++ LCK K+ +AQ+V + RG+ +N LI+G C
Sbjct: 484 EMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKG 543
Query: 179 NLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFT 238
+++ FR M G+ ++ TY+ LI+GL +L +AE LL E+ +GL P+ +
Sbjct: 544 KIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYN 603
Query: 239 TLIDGHCKNGRIDMAGDMKEARK------------IVDEMCTN-------------GLNP 273
+LI G+ G + + E K ++ +CT L P
Sbjct: 604 SLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKP 663
Query: 274 DKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERML 333
D + Y +L + GD+E A +++K+MI++ I LD + +LI G + GK+ E ++
Sbjct: 664 DLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLI 723
Query: 334 REMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKH 393
EM ++P+ TY +++ C+ D + + +EM+ G L V N L++GL +
Sbjct: 724 DEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEE 783
Query: 394 GQLKNANMLLDTM 406
+ K A +++ M
Sbjct: 784 WRSKEAEIVISEM 796
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 116/250 (46%), Gaps = 33/250 (13%)
Query: 116 FYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHC 175
F E+L G ++ +N L+ L GK+ +A+ + E ++GL ++N+LI+G+
Sbjct: 551 FSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYG 610
Query: 176 KAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDV 235
A N+ L M+ SG++P + TY LI+ LC + ++ E L EM L P+ +
Sbjct: 611 FAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS-LCTKEGIELTERLFGEM---SLKPDLL 666
Query: 236 IFTTLIDGHCKNGRIDMA-----------------------------GDMKEARKIVDEM 266
++ ++ + +G ++ A G + E R ++DEM
Sbjct: 667 VYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEM 726
Query: 267 CTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKV 326
+ P+ TY I++ G C+ D SA +EM ++G LD L+SG +
Sbjct: 727 NAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRS 786
Query: 327 VEAERMLREM 336
EAE ++ EM
Sbjct: 787 KEAEIVISEM 796
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%)
Query: 131 VFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVM 190
+N L+ K GK+ + + + DE R + A ++N ++ GHC+ K+ + M
Sbjct: 702 TYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREM 761
Query: 191 EGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGL 230
+ G DV + L++GL +E R +AE+++ EM R L
Sbjct: 762 QEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGRML 801
>sp|Q9FKR3|PP404_ARATH Pentatricopeptide repeat-containing protein At5g38730
OS=Arabidopsis thaliana GN=At5g38730 PE=2 SV=1
Length = 596
Score = 202 bits (513), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 126/463 (27%), Positives = 225/463 (48%), Gaps = 39/463 (8%)
Query: 1 PHFRLTLHAYSTMVHFLVAHKMHSQARDLLHLIVSKKGMGSS---ASLFASILETRG--T 55
P + +L + M+ L HK A LL + ++ + S SL + E +
Sbjct: 74 PSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGVSEDPEDVS 133
Query: 56 HLPGLVLDALMIVYVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLG 115
H V LMI Y G ++D+I F +R + + C L++ +++ L
Sbjct: 134 H----VFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWK 189
Query: 116 FYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHC 175
+ +++ G +++V+NVL+H K G + A+ + E ++G+ ++NTLI+ +C
Sbjct: 190 IFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYC 249
Query: 176 KAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDV 235
K E ++ ME SG+ P++ TY++ I+G +E R+ +A L E+ + +T N V
Sbjct: 250 KKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREI-KDDVTANHV 308
Query: 236 IFTTLIDGHCKNGRIDMA-----------------------------GDMKEARKIVDEM 266
+TTLIDG+C+ ID A G ++EA +++ EM
Sbjct: 309 TYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEM 368
Query: 267 CTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKV 326
+ PD IT L++ +CK D+ SA+ ++K+MI+ G++LD ++ ALI GFC+ ++
Sbjct: 369 SGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLEL 428
Query: 327 VEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNAL 386
A+ L M++ G P ATY+ ++D F +LL+E G V Y L
Sbjct: 429 ENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGL 488
Query: 387 MNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHG 429
+ +CK Q+ A +L ++M G+V D + + + + + G
Sbjct: 489 IRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTG 531
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 139/294 (47%), Gaps = 34/294 (11%)
Query: 124 GYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEG 183
G +P++ +N +H +EG++++A +F E K + A V++ TLI+G+C+ ++DE
Sbjct: 268 GVAPNIVTYNSFIHGFSREGRMREATRLFREI-KDDVTANHVTYTTLIDGYCRMNDIDEA 326
Query: 184 FRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDG 243
RL+ VME G P V TY++++ LC++ R+ +A LL EM + + P+++ TLI+
Sbjct: 327 LRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINA 386
Query: 244 HCKNGRIDMAGDMKEARKIVDE-------------------------------MCTNGLN 272
+CK DM +K +K+++ M G +
Sbjct: 387 YCKIE--DMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFS 444
Query: 273 PDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERM 332
P TY+ L+DGF + + + +E KRG+ D + LI C+ +V A+ +
Sbjct: 445 PGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVL 504
Query: 333 LREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNAL 386
M K GL D +T + + + G L M + + ++ Y ++
Sbjct: 505 FESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSI 558
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 123/238 (51%), Gaps = 6/238 (2%)
Query: 124 GYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEG 183
G+SP V +N ++ KLC++G+I++A + E + + ++ NTLIN +CK +++
Sbjct: 337 GFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSA 396
Query: 184 FRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDG 243
++K M SG++ D+Y+Y ALI+G CK L++A+ L M E+G +P ++ L+DG
Sbjct: 397 VKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDG 456
Query: 244 HCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIK 303
+ D E K+++E GL D Y L+ CK ++ A + + M K
Sbjct: 457 FYNQNKQD------EITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEK 510
Query: 304 RGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDT 361
+G+ D+V FT + + R GKV EA + M L + Y + + + D
Sbjct: 511 KGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSISASYAGDNDV 568
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 54/123 (43%)
Query: 118 LEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKA 177
+++ G+SP ++ L+ + K + + +EF KRGL A + LI CK
Sbjct: 436 FSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKL 495
Query: 178 KNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIF 237
+ +D L ME G+ D ++ + + ++ +A L M R L N ++
Sbjct: 496 EQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLY 555
Query: 238 TTL 240
++
Sbjct: 556 KSI 558
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 139/454 (30%), Positives = 220/454 (48%), Gaps = 30/454 (6%)
Query: 7 LHAYSTMVHFLVAHKMHSQARDLLHLIVSKKGMGSSASLFASILE--TRGTHLPGLVLDA 64
L+ Y+ +++ S A LL ++ K G S +S+L G + V A
Sbjct: 45 LYTYNILINCFCRRSQISLALALLGKMM-KLGYEPSIVTLSSLLNGYCHGKRISDAV--A 101
Query: 65 LMIVYVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYLEILDYG 124
L+ V++G+ D I L+ + A L+DRM++ G
Sbjct: 102 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR----------------G 145
Query: 125 YSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGF 184
P++ + V+++ LCK G I A + ++ + A V FNT+I+ CK +++D+
Sbjct: 146 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 205
Query: 185 RLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGH 244
L ME G+RP+V TYS+LI+ LC R DA LL +M E+ + PN V F LID
Sbjct: 206 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 265
Query: 245 CKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKR 304
K G+ EA K+ D+M ++PD TY L++GFC L+ A + + M+ +
Sbjct: 266 VKEGKF------VEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK 319
Query: 305 GIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTG 364
D + LI GFC+ +V + + REM GL D TYT +I +GD
Sbjct: 320 DCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA 379
Query: 365 FRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEG 424
++ K+M SDG P + TY+ L++GLC +G+L+ A + D M + D Y ++EG
Sbjct: 380 QKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEG 439
Query: 425 HCKHGNPEDFDKL---QSEKGLVSDYACYTSLVS 455
CK G +D L S KG+ + Y +++S
Sbjct: 440 MCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 473
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/358 (31%), Positives = 193/358 (53%), Gaps = 12/358 (3%)
Query: 101 IDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGL 160
I +M + +L ++LG ++ L G S ++Y +N+L++ C+ +I A + + K G
Sbjct: 20 IAKMKKFDL-VISLGEKMQRL--GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGY 76
Query: 161 HATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAEL 220
+ V+ ++L+NG+C K + + L M G RPD T++ LI+GL N+ +A
Sbjct: 77 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 136
Query: 221 LLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTI 280
L+ M +RG PN V + +++G CK G ID+A ++ +++M + D + +
Sbjct: 137 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL------LNKMEAAKIEADVVIFNT 190
Query: 281 LLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVG 340
++D CK ++ AL++ KEM +GI + V +++LIS C G+ +A ++L +M++
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 250
Query: 341 LKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNAN 400
+ P+ T+ +ID F K G +L +M P + TYN+L+NG C H +L A
Sbjct: 251 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAK 310
Query: 401 MLLDTMLDLGVVPDDITYNILLEGHCKHGNPEDFDKL---QSEKGLVSDYACYTSLVS 455
+ + M+ PD TYN L++G CK ED +L S +GLV D YT+L+
Sbjct: 311 QMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 368
Score = 179 bits (454), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 109/347 (31%), Positives = 171/347 (49%), Gaps = 6/347 (1%)
Query: 75 LDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNV 134
+DDA+ F+ + R LI + + ++++ +P++ FN
Sbjct: 201 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 260
Query: 135 LMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSG 194
L+ KEGK +A+ + D+ KR + ++N+LING C LD+ ++ M
Sbjct: 261 LIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD 320
Query: 195 MRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAG 254
PD+ TY+ LI G CK R++D L EM RGL + V +TTLI G +G
Sbjct: 321 CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG------ 374
Query: 255 DMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFT 314
D A+K+ +M ++G+ PD +TY+ILLDG C G LE AL++ M K I+LD +T
Sbjct: 375 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYT 434
Query: 315 ALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSD 374
+I G C+ GKV + + + G+KP+ TY +I C + + LLK+M+ D
Sbjct: 435 TMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED 494
Query: 375 GHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNIL 421
G LP TYN L+ + G + L+ M V D T ++
Sbjct: 495 GPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 541
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 115/227 (50%), Gaps = 9/227 (3%)
Query: 232 PNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDL 291
P+ F L+ K + D+ + E +M G++ + TY IL++ FC+ +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGE------KMQRLGISHNLYTYNILINCFCRRSQI 61
Query: 292 ESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMV 351
AL + +M+K G E V ++L++G+C G ++ +A ++ +M+++G +PD T+T +
Sbjct: 62 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 121
Query: 352 IDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGV 411
I + L+ M G P + TY ++NGLCK G + A LL+ M +
Sbjct: 122 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 181
Query: 412 VPDDITYNILLEGHCKHGNPEDFDKLQSE---KGLVSDYACYTSLVS 455
D + +N +++ CK+ + +D L E KG+ + Y+SL+S
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 228
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 201 bits (510), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 177/349 (50%), Gaps = 30/349 (8%)
Query: 119 EILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKR-GLHATAVSFNTLINGHCKA 177
+++++G S S NV++H CKEG+++DA E + G +FNTL+NG CKA
Sbjct: 249 QMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKA 308
Query: 178 KNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIF 237
++ + VM G PDVYTY+++I+GLCK + +A +L +M R +PN V +
Sbjct: 309 GHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTY 368
Query: 238 TTLIDGHCKNGRIDMAGDM-----------------------------KEARKIVDEMCT 268
TLI CK +++ A ++ + A ++ +EM +
Sbjct: 369 NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRS 428
Query: 269 NGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVE 328
G PD+ TY +L+D C +G L+ AL++ K+M G + + LI GFC+ K E
Sbjct: 429 KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTRE 488
Query: 329 AERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMN 388
AE + EM G+ + TY +ID CK+ + +L+ +M +G P TYN+L+
Sbjct: 489 AEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLT 548
Query: 389 GLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPEDFDKL 437
C+ G +K A ++ M G PD +TY L+ G CK G E KL
Sbjct: 549 HFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKL 597
Score = 192 bits (489), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 116/369 (31%), Positives = 181/369 (49%), Gaps = 46/369 (12%)
Query: 120 ILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKN 179
+L GY P VY +N ++ LCK G++K+A V D+ R V++NTLI+ CK
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 180 LDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTT 239
++E L V+ G+ PDV T+++LI GLC A L EM +G P++ +
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Query: 240 LIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRK 299
LID C G++D EA ++ +M +G ITY L+DGFCK A +I
Sbjct: 441 LIDSLCSKGKLD------EALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFD 494
Query: 300 EMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNG 359
EM G+ ++V + LI G C+ +V +A +++ +M+ G KPD TY ++ FC+ G
Sbjct: 495 EMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGG 554
Query: 360 DTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGV-------- 411
D K +++ M S+G P + TY L++GLCK G+++ A+ LL ++ G+
Sbjct: 555 DIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYN 614
Query: 412 ----------------------------VPDDITYNILLEGHCKHGNP--EDFDKLQS-- 439
PD ++Y I+ G C G P E D L
Sbjct: 615 PVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELL 674
Query: 440 EKGLVSDYA 448
EKG V +++
Sbjct: 675 EKGFVPEFS 683
Score = 186 bits (472), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 177/366 (48%), Gaps = 33/366 (9%)
Query: 123 YGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDE 182
+G P V FNVL+ LC+ +++ A ++ ++ GL +F T++ G+ + +LD
Sbjct: 183 WGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDG 242
Query: 183 GFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCER-GLTPNDVIFTTLI 241
R++ M G + + +++G CKE R++DA + EM + G P+ F TL+
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302
Query: 242 DGHCKNGRIDMA-----------------------------GDMKEARKIVDEMCTNGLN 272
+G CK G + A G++KEA +++D+M T +
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS 362
Query: 273 PDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERM 332
P+ +TY L+ CKE +E A ++ + + +GI D F +LI G C A +
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422
Query: 333 LREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCK 392
EM G +PD+ TY M+ID C G +LK+M G +V TYN L++G CK
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482
Query: 393 HGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPEDFDKLQSE---KGLVSDYAC 449
+ + A + D M GV + +TYN L++G CK ED +L + +G D
Sbjct: 483 ANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYT 542
Query: 450 YTSLVS 455
Y SL++
Sbjct: 543 YNSLLT 548
Score = 168 bits (426), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 177/335 (52%), Gaps = 11/335 (3%)
Query: 125 YSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGF 184
+SP ++ ++ +L + G D + + ++ +F LI + + + DE
Sbjct: 79 FSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEIL 138
Query: 185 RLKSVM-EGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDG 243
+ M + G++PD + Y+ ++N L N L E+ +M G+ P+ F LI
Sbjct: 139 SVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKA 198
Query: 244 HCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIK 303
C+ A ++ A ++++M + GL PD+ T+T ++ G+ +EGDL+ AL IR++M++
Sbjct: 199 LCR------AHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVE 252
Query: 304 RGIELDNVAFTALISGFCRGGKVVEAERMLREML-KVGLKPDDATYTMVIDCFCKNGDTK 362
G NV+ ++ GFC+ G+V +A ++EM + G PD T+ +++ CK G K
Sbjct: 253 FGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVK 312
Query: 363 TGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILL 422
++ M +G+ P V TYN++++GLCK G++K A +LD M+ P+ +TYN L+
Sbjct: 313 HAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLI 372
Query: 423 EGHCKHGNPEDFDKLQ---SEKGLVSDYACYTSLV 454
CK E+ +L + KG++ D + SL+
Sbjct: 373 STLCKENQVEEATELARVLTSKGILPDVCTFNSLI 407
Score = 161 bits (408), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 156/311 (50%), Gaps = 7/311 (2%)
Query: 120 ILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKN 179
I ++G P + +N +++ L +K ++ + G+ +FN LI C+A
Sbjct: 145 IDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQ 204
Query: 180 LDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTT 239
L + M G+ PD T++ ++ G +E LD A + +M E G + ++V
Sbjct: 205 LRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNV 264
Query: 240 LIDGHCKNGRIDMAGDMKEARKIVDEMCT-NGLNPDKITYTILLDGFCKEGDLESALDIR 298
++ G CK GR++ +A + EM +G PD+ T+ L++G CK G ++ A++I
Sbjct: 265 IVHGFCKEGRVE------DALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIM 318
Query: 299 KEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKN 358
M++ G + D + ++ISG C+ G+V EA +L +M+ P+ TY +I CK
Sbjct: 319 DVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKE 378
Query: 359 GDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITY 418
+ L + + S G LP V T+N+L+ GLC + A L + M G PD+ TY
Sbjct: 379 NQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTY 438
Query: 419 NILLEGHCKHG 429
N+L++ C G
Sbjct: 439 NMLIDSLCSKG 449
Score = 153 bits (386), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 140/281 (49%), Gaps = 8/281 (2%)
Query: 112 VTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLI 171
V + + E+ G P + +N+L+ LC +GK+ +A + + G + +++NTLI
Sbjct: 418 VAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLI 477
Query: 172 NGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLT 231
+G CKA E + ME G+ + TY+ LI+GLCK R++DA L+ +M G
Sbjct: 478 DGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQK 537
Query: 232 PNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDL 291
P+ + +L+ C+ GD+K+A IV M +NG PD +TY L+ G CK G +
Sbjct: 538 PDKYTYNSLLTHFCR------GGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRV 591
Query: 292 ESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDA-TYTM 350
E A + + + +GI L A+ +I G R K EA + REML+ P DA +Y +
Sbjct: 592 EVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRI 651
Query: 351 VIDCFCK-NGDTKTGFRLLKEMRSDGHLPAVETYNALMNGL 390
V C G + L E+ G +P + L GL
Sbjct: 652 VFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGL 692
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 201 bits (510), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 131/454 (28%), Positives = 225/454 (49%), Gaps = 31/454 (6%)
Query: 7 LHAYSTMVHFLVAHKMHSQARDLLHLIVSKKGMGSSASLFASILE--TRGTHLPGLVLDA 64
L+ YS +++ S A +L ++ K G G S S+L G + V A
Sbjct: 110 LYTYSIFINYFCRRSQLSLALAILGKMM-KLGYGPSIVTLNSLLNGFCHGNRISEAV--A 166
Query: 65 LMIVYVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYLEILDYG 124
L+ V++G+ D + L+ + A L++RM+ G
Sbjct: 167 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK----------------G 210
Query: 125 YSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGF 184
P + + +++ LCK G+ A + ++ K + A V +NT+I+G CK K++D+ F
Sbjct: 211 CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAF 270
Query: 185 RLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGH 244
L + ME G++PDV+TY+ LI+ LC R DA LL +M E+ + P+ V F LID
Sbjct: 271 DLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAF 330
Query: 245 CKNGRIDMAGDMKEARKIVDEMC-TNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIK 303
K G+ + EA K+ DEM + PD + Y L+ GFCK +E +++ +EM +
Sbjct: 331 VKEGK------LVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQ 384
Query: 304 RGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKT 363
RG+ + V +T LI GF + A+ + ++M+ G+ PD TY +++D C NG+ +T
Sbjct: 385 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVET 444
Query: 364 GFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLE 423
+ + M+ + TY ++ LCK G++++ L ++ GV P+ +TY ++
Sbjct: 445 ALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMS 504
Query: 424 GHCKHGNPEDFDKL---QSEKGLVSDYACYTSLV 454
G C+ G E+ D L E G + + Y +L+
Sbjct: 505 GFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLI 538
Score = 176 bits (446), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 122/417 (29%), Positives = 201/417 (48%), Gaps = 41/417 (9%)
Query: 75 LDDAIQCF-RLLRKHYFRIPARGCRCL--IDRMMRTNLPTVTLGFYLEILDYGYSPSVYV 131
LDDAI F +++ F + L I +M + +L ++LG ++ L G S ++Y
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDL-VISLGEQMQNL--GISHNLYT 112
Query: 132 FNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVME 191
+++ ++ C+ ++ A + + K G + V+ N+L+NG C + E L M
Sbjct: 113 YSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 172
Query: 192 GSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRID 251
G +PD T++ L++GL + N+ +A L+ M +G P+ V + +I+G CK G D
Sbjct: 173 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 232
Query: 252 MA-------------GDMKEARKIVDEMC----------------TNGLNPDKITYTILL 282
+A D+ I+D +C T G+ PD TY L+
Sbjct: 233 LALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLI 292
Query: 283 DGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVG-L 341
C G A + +M+++ I D V F ALI F + GK+VEAE++ EM+K
Sbjct: 293 SCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHC 352
Query: 342 KPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANM 401
PD Y +I FCK + G + +EM G + TY L++G + NA M
Sbjct: 353 FPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 412
Query: 402 LLDTMLDLGVVPDDITYNILLEGHCKHGNPED----FDKLQSEKGLVSDYACYTSLV 454
+ M+ GV PD +TYNILL+G C +GN E F+ +Q ++ + D YT+++
Sbjct: 413 VFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQ-KRDMKLDIVTYTTMI 468
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 165/332 (49%), Gaps = 10/332 (3%)
Query: 135 LMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSG 194
L K+ ++ K+ DA +F + K + V F+ L++ K D L M+ G
Sbjct: 46 LSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLG 105
Query: 195 MRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAG 254
+ ++YTYS IN C+ ++L A +L +M + G P+ V +L++G C RI
Sbjct: 106 ISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRI---- 161
Query: 255 DMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFT 314
EA +VD+M G PD +T+T L+ G + A+ + + M+ +G + D V +
Sbjct: 162 --SEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYG 219
Query: 315 ALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSD 374
A+I+G C+ G+ A +L +M K ++ D Y +ID CK F L +M +
Sbjct: 220 AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETK 279
Query: 375 GHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPEDF 434
G P V TYN L++ LC +G+ +A+ LL ML+ + PD + +N L++ K G +
Sbjct: 280 GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEA 339
Query: 435 DKLQSE----KGLVSDYACYTSLVSKSSKYRQ 462
+KL E K D Y +L+ KY++
Sbjct: 340 EKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR 371
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 199 bits (506), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 177/326 (54%), Gaps = 10/326 (3%)
Query: 120 ILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKN 179
+++ G+ P + N L++ LC GK +A ++ D+ + G AV++ ++N CK+
Sbjct: 184 MVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQ 243
Query: 180 LDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTT 239
L ME ++ D YS +I+GLCK LD+A L +EM +G+T N + +
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNI 303
Query: 240 LIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRK 299
LI G C GR D + K++ +M +NP+ +T+++L+D F KEG L A ++ K
Sbjct: 304 LIGGFCNAGRWD------DGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHK 357
Query: 300 EMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNG 359
EMI RGI D + +T+LI GFC+ + +A +M+ M+ G P+ T+ ++I+ +CK
Sbjct: 358 EMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKAN 417
Query: 360 DTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYN 419
G L ++M G + TYN L+ G C+ G+L A L M+ V P+ +TY
Sbjct: 418 RIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYK 477
Query: 420 ILLEGHCKHGNPED----FDKLQSEK 441
ILL+G C +G E F+K++ K
Sbjct: 478 ILLDGLCDNGESEKALEIFEKIEKSK 503
Score = 193 bits (491), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 107/344 (31%), Positives = 174/344 (50%), Gaps = 41/344 (11%)
Query: 132 FNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVME 191
+++++ LCK G + +A +F+E +G+ +++N LI G C A D+G +L M
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 192 GSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRID 251
+ P+V T+S LI+ KE +L +AE L EM RG+ P+ + +T+LIDG CK +D
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 252 MAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNV 311
A M VD M + G +P+ T+ IL++G+CK ++ L++ ++M RG+ D V
Sbjct: 386 KANQM------VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV 439
Query: 312 AFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEM 371
+ LI GFC GK+ A+ + +EM+ + P+ TY +++D C NG+++ + +++
Sbjct: 440 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499
Query: 372 RSD-----------------------------------GHLPAVETYNALMNGLCKHGQL 396
G P V+TYN ++ GLCK G L
Sbjct: 500 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 559
Query: 397 KNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPEDFDKLQSE 440
A +L M + G PD TYNIL+ H G+ KL E
Sbjct: 560 SEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEE 603
Score = 192 bits (489), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/327 (34%), Positives = 174/327 (53%), Gaps = 10/327 (3%)
Query: 119 EILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAK 178
+I+ GY P+ F+ L++ LC EG++ +A + D + G ++ NTL+NG C +
Sbjct: 148 KIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSG 207
Query: 179 NLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFT 238
E L M G +P+ TY ++N +CK + A LL +M ER + + V ++
Sbjct: 208 KEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 267
Query: 239 TLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIR 298
+IDG CK+G +D A + +EM G+ + ITY IL+ GFC G + +
Sbjct: 268 IIIDGLCKHGSLD------NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL 321
Query: 299 KEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKN 358
++MIKR I + V F+ LI F + GK+ EAE + +EM+ G+ PD TYT +ID FCK
Sbjct: 322 RDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKE 381
Query: 359 GDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITY 418
+++ M S G P + T+N L+NG CK ++ + L M GVV D +TY
Sbjct: 382 NHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTY 441
Query: 419 NILLEGHCKHGN----PEDFDKLQSEK 441
N L++G C+ G E F ++ S K
Sbjct: 442 NTLIQGFCELGKLNVAKELFQEMVSRK 468
Score = 191 bits (486), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 121/390 (31%), Positives = 203/390 (52%), Gaps = 23/390 (5%)
Query: 76 DDAIQCFRLLRKHYFRIPARGCRCLID------RMMRTNLPTVTLGFYLEILDYGYSPSV 129
DDAI FR + I +R +ID + +T + L ++ G + ++
Sbjct: 70 DDAIDLFRDM------IHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNL 123
Query: 130 YVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSV 189
Y +++++ C+ K+ A + K G ++F+TLING C + E L
Sbjct: 124 YTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDR 183
Query: 190 MEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGR 249
M G +PD+ T + L+NGLC + +A LL+ +M E G PN V + +++ CK+G+
Sbjct: 184 MVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQ 243
Query: 250 IDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELD 309
+A M+ RK M + D + Y+I++DG CK G L++A ++ EM +GI +
Sbjct: 244 TALA--MELLRK----MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTN 297
Query: 310 NVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLK 369
+ + LI GFC G+ + ++LR+M+K + P+ T++++ID F K G + L K
Sbjct: 298 IITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHK 357
Query: 370 EMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHG 429
EM G P TY +L++G CK L AN ++D M+ G P+ T+NIL+ G+CK
Sbjct: 358 EMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKAN 417
Query: 430 NPED----FDKLQSEKGLVSDYACYTSLVS 455
+D F K+ S +G+V+D Y +L+
Sbjct: 418 RIDDGLELFRKM-SLRGVVADTVTYNTLIQ 446
Score = 175 bits (444), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 162/298 (54%), Gaps = 6/298 (2%)
Query: 126 SPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFR 185
+P+V F+VL+ KEGK+++A+ + E RG+ +++ +LI+G CK +LD+ +
Sbjct: 330 NPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQ 389
Query: 186 LKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHC 245
+ +M G P++ T++ LING CK NR+DD L +M RG+ + V + TLI G C
Sbjct: 390 MVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 449
Query: 246 KNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRG 305
+ G++++A +++ EM + + P+ +TY ILLDG C G+ E AL+I +++ K
Sbjct: 450 ELGKLNVA------KELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 503
Query: 306 IELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGF 365
+ELD + +I G C KV +A + + G+KP TY ++I CK G
Sbjct: 504 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 563
Query: 366 RLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLE 423
L ++M DGH P TYN L+ G + L++ + G D T ++++
Sbjct: 564 LLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID 621
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 119/244 (48%), Gaps = 9/244 (3%)
Query: 214 RLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNP 273
+ DDA L +M P + F+ L K + D+ + +M G+
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLV------LALCKQMELKGIAH 121
Query: 274 DKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERML 333
+ T +I+++ FC+ L A ++IK G E + + F+ LI+G C G+V EA ++
Sbjct: 122 NLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELV 181
Query: 334 REMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKH 393
M+++G KPD T +++ C +G L+ +M G P TY ++N +CK
Sbjct: 182 DRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKS 241
Query: 394 GQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPEDFDKLQSE---KGLVSDYACY 450
GQ A LL M + + D + Y+I+++G CKHG+ ++ L +E KG+ ++ Y
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITY 301
Query: 451 TSLV 454
L+
Sbjct: 302 NILI 305
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 42/86 (48%)
Query: 124 GYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEG 183
G P V +N+++ LCK+G + +A+++F + + G ++N LI H + +
Sbjct: 538 GVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKS 597
Query: 184 FRLKSVMEGSGMRPDVYTYSALINGL 209
+L ++ G D T +I+ L
Sbjct: 598 VKLIEELKRCGFSVDASTIKMVIDML 623
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 198 bits (504), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 130/446 (29%), Positives = 219/446 (49%), Gaps = 16/446 (3%)
Query: 16 FLVAHKMHSQARDLLHLIVSKKGMGSSASLFASILETRGTHLPGLV-LDALMIVYVDLGF 74
F + S R +L + + LF ++ +R LP ++ L+ V +
Sbjct: 41 FCFWIRAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRP--LPSIIDFTRLLSVIAKMNR 98
Query: 75 LDDAIQCFRLLRKHYFRIPARGCRC--LIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVF 132
D I F + IP C C ++ + ++ P F +++ G+ P + F
Sbjct: 99 YDVVISLFE--QMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTF 156
Query: 133 NVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEG 192
L++ C +I+DA +FD+ G V++ TLI CK ++L+ L + M
Sbjct: 157 TSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGT 216
Query: 193 SGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDM 252
+G RP+V TY+AL+ GLC+ R DA LL +M +R + PN + FT LID K
Sbjct: 217 NGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVK------ 270
Query: 253 AGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVA 312
G + EA+++ + M + PD TY L++G C G L+ A + M + G + V
Sbjct: 271 VGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVI 330
Query: 313 FTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMR 372
+T LI GFC+ +V + ++ EM + G+ + TYT++I +C G + +M
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS 390
Query: 373 SDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPE 432
S P + TYN L++GLC +G+++ A M+ + M + + +TY I+++G CK G E
Sbjct: 391 SRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVE 450
Query: 433 D-FDKLQS--EKGLVSDYACYTSLVS 455
D FD S KG+ + YT+++S
Sbjct: 451 DAFDLFCSLFSKGMKPNVITYTTMIS 476
Score = 176 bits (445), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 152/295 (51%), Gaps = 6/295 (2%)
Query: 124 GYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEG 183
G P+V +N L+ LC+ G+ DA + + KR + ++F LI+ K L E
Sbjct: 218 GSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEA 277
Query: 184 FRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDG 243
L +VM + PDV+TY +LINGLC LD+A + + M G PN+VI+TTLI G
Sbjct: 278 KELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHG 337
Query: 244 HCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIK 303
CK+ R++ + KI EM G+ + ITYT+L+ G+C G + A ++ +M
Sbjct: 338 FCKSKRVE------DGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSS 391
Query: 304 RGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKT 363
R D + L+ G C GKV +A + M K + + TYT++I CK G +
Sbjct: 392 RRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVED 451
Query: 364 GFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITY 418
F L + S G P V TY +++G C+ G + A+ L M + G +P++ Y
Sbjct: 452 AFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 96/213 (45%), Gaps = 20/213 (9%)
Query: 73 GFLDDAIQCFRLLRKHYFRIPARGC-------RCLIDRMMRTNLPTVTLGFYLEILDYGY 125
G LD+A Q F L+ ++ GC LI ++ + + E+ G
Sbjct: 307 GLLDEARQMFYLMERN-------GCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGV 359
Query: 126 SPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFR 185
+ + VL+ C G+ AQ VF++ R ++N L++G C +++
Sbjct: 360 VANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALM 419
Query: 186 LKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHC 245
+ M M ++ TY+ +I G+CK +++DA L + +G+ PN + +TT+I G C
Sbjct: 420 IFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFC 479
Query: 246 KNGRIDMAGDMKEARKIVDEMCTNGLNPDKITY 278
+ G I EA + +M +G P++ Y
Sbjct: 480 RRGLI------HEADSLFKKMKEDGFLPNESVY 506
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 196 bits (497), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 115/366 (31%), Positives = 189/366 (51%), Gaps = 12/366 (3%)
Query: 100 LIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRG 159
+I+ + R + + L +++ +GY P V + L++ C+ ++ DA + + + G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 160 LHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAE 219
V +NT+I+G CK +++ L ME G+R D TY++L+ GLC R DA
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 220 LLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYT 279
L+ +M R + PN + FT +ID K G+ EA K+ +EM ++PD TY
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGK------FSEAMKLYEEMTRRCVDPDVFTYN 283
Query: 280 ILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKV 339
L++G C G ++ A + M+ +G D V + LI+GFC+ +V E ++ REM +
Sbjct: 284 SLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR 343
Query: 340 GLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNA 399
GL D TY +I + + G + M S P + TY+ L+ GLC + +++ A
Sbjct: 344 GLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKA 400
Query: 400 NMLLDTMLDLGVVPDDITYNILLEGHCKHGNPED-FDKLQSE--KGLVSDYACYTSLVSK 456
+L + M + D TYNI++ G CK GN ED +D +S KGL D YT+++S
Sbjct: 401 LVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISG 460
Query: 457 SSKYRQ 462
+ RQ
Sbjct: 461 FCRKRQ 466
Score = 176 bits (446), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 99/296 (33%), Positives = 165/296 (55%), Gaps = 9/296 (3%)
Query: 163 TAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLL 222
+ V F+ +++ K+KN D L ME G+ D+Y+Y+ +IN LC+ +R A ++
Sbjct: 68 SIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVV 127
Query: 223 HEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILL 282
+M + G P+ V ++LI+G C+ R+ A D+ V +M G PD + Y ++
Sbjct: 128 GKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDL------VSKMEEMGFRPDVVIYNTII 181
Query: 283 DGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLK 342
DG CK G + A+++ M + G+ D V + +L++G C G+ +A R++R+M+ +
Sbjct: 182 DGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIV 241
Query: 343 PDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANML 402
P+ T+T VID F K G +L +EM P V TYN+L+NGLC HG++ A +
Sbjct: 242 PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQM 301
Query: 403 LDTMLDLGVVPDDITYNILLEGHCKHGNPEDFDKL---QSEKGLVSDYACYTSLVS 455
LD M+ G +PD +TYN L+ G CK ++ KL +++GLV D Y +++
Sbjct: 302 LDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQ 357
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/321 (32%), Positives = 162/321 (50%), Gaps = 10/321 (3%)
Query: 127 PSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRL 186
PS+ F+ ++ K+ K +F G+ S+N +IN C+ +
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 187 KSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCK 246
M G PDV T S+LING C+ NR+ DA L+ +M E G P+ VI+ T+IDG CK
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 247 NGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGI 306
G ++ +A ++ D M +G+ D +TY L+ G C G A + ++M+ R I
Sbjct: 187 IGLVN------DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDI 240
Query: 307 ELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFR 366
+ + FTA+I F + GK EA ++ EM + + PD TY +I+ C +G +
Sbjct: 241 VPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQ 300
Query: 367 LLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHC 426
+L M + G LP V TYN L+NG CK ++ L M G+V D ITYN +++G+
Sbjct: 301 MLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYF 360
Query: 427 KHGNP----EDFDKLQSEKGL 443
+ G P E F ++ S +
Sbjct: 361 QAGRPDAAQEIFSRMDSRPNI 381
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 157/328 (47%), Gaps = 46/328 (14%)
Query: 122 DYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHC------ 175
+ G+ P V ++N ++ CK G + DA +FD + G+ A AV++N+L+ G C
Sbjct: 167 EMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWS 226
Query: 176 -----------------------------KAKNLDEGFRLKSVMEGSGMRPDVYTYSALI 206
K E +L M + PDV+TY++LI
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 286
Query: 207 NGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEM 266
NGLC R+D+A+ +L M +G P+ V + TLI+G CK+ R+D E K+ EM
Sbjct: 287 NGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVD------EGTKLFREM 340
Query: 267 CTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNV-AFTALISGFCRGGK 325
GL D ITY ++ G+ + G ++A +I M R N+ ++ L+ G C +
Sbjct: 341 AQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR----PNIRTYSILLYGLCMNWR 396
Query: 326 VVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNA 385
V +A + M K ++ D TY +VI CK G+ + + L + + G P V +Y
Sbjct: 397 VEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTT 456
Query: 386 LMNGLCKHGQLKNANMLLDTMLDLGVVP 413
+++G C+ Q +++L M + G++P
Sbjct: 457 MISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 196 bits (497), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 194/383 (50%), Gaps = 10/383 (2%)
Query: 75 LDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNV 134
+D+A+ F ++ R LI + + + L E+ + G P+++ + V
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 135 LMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSG 194
L+ LC + K + A+ + + ++GL +++N LING+CK +++ + +ME
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423
Query: 195 MRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAG 254
+ P+ TY+ LI G CK N + A +L++M ER + P+ V + +LIDG C++G D
Sbjct: 424 LSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFD--- 479
Query: 255 DMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFT 314
A +++ M GL PD+ TYT ++D CK +E A D+ + ++G+ + V +T
Sbjct: 480 ---SAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYT 536
Query: 315 ALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSD 374
ALI G+C+ GKV EA ML +ML P+ T+ +I C +G K L ++M
Sbjct: 537 ALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKI 596
Query: 375 GHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHG---NP 431
G P V T L++ L K G +A ML G PD TY ++ +C+ G +
Sbjct: 597 GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDA 656
Query: 432 EDFDKLQSEKGLVSDYACYTSLV 454
ED E G+ D Y+SL+
Sbjct: 657 EDMMAKMRENGVSPDLFTYSSLI 679
Score = 189 bits (480), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 174/307 (56%), Gaps = 7/307 (2%)
Query: 119 EILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAK 178
++L+ G P+V +N L++ CK G I+DA V + R L ++N LI G+CK+
Sbjct: 383 QMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS- 441
Query: 179 NLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFT 238
N+ + + + M + PDV TY++LI+G C+ D A LL M +RGL P+ +T
Sbjct: 442 NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYT 501
Query: 239 TLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIR 298
++ID CK+ R++ A D+ D + G+NP+ + YT L+DG+CK G ++ A +
Sbjct: 502 SMIDSLCKSKRVEEACDL------FDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLML 555
Query: 299 KEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKN 358
++M+ + +++ F ALI G C GK+ EA + +M+K+GL+P +T T++I K+
Sbjct: 556 EKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKD 615
Query: 359 GDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITY 418
GD + ++M S G P TY + C+ G+L +A ++ M + GV PD TY
Sbjct: 616 GDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTY 675
Query: 419 NILLEGH 425
+ L++G+
Sbjct: 676 SSLIKGY 682
Score = 182 bits (463), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 130/478 (27%), Positives = 228/478 (47%), Gaps = 46/478 (9%)
Query: 7 LHAYSTMVHFLVAHKMHSQARDLLHLIVSKKGMGSSASLFASILETRGTHLPGLVLDALM 66
+H Y+ ++ L + +AR+LL ++ K M + + +AL+
Sbjct: 358 IHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNV-----------------ITYNALI 400
Query: 67 IVYVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYLEILDYGYS 126
Y G ++DA+ L+ R LI ++N+ +G ++L+
Sbjct: 401 NGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHK-AMGVLNKMLERKVL 459
Query: 127 PSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRL 186
P V +N L+ C+ G A + RGL ++ ++I+ CK+K ++E L
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDL 519
Query: 187 KSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCK 246
+E G+ P+V Y+ALI+G CK ++D+A L+L +M + PN + F LI G C
Sbjct: 520 FDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCA 579
Query: 247 NGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGI 306
+G+ +KEA + ++M GL P T TIL+ K+GD + A ++M+ G
Sbjct: 580 DGK------LKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGT 633
Query: 307 ELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFR 366
+ D +T I +CR G++++AE M+ +M + G+ PD TY+ +I + G T F
Sbjct: 634 KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFD 693
Query: 367 LLKEMRSDGHLPAVETYNALMNGLC--KHGQLKN--------ANM--------LLDTMLD 408
+LK MR G P+ T+ +L+ L K+G+ K +NM LL+ M++
Sbjct: 694 VLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVE 753
Query: 409 LGVVPDDITYNILLEGHCKHGN----PEDFDKLQSEKGLVSDYACYTSLVSKSSKYRQ 462
V P+ +Y L+ G C+ GN + FD +Q +G+ + +L+S K ++
Sbjct: 754 HSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKK 811
Score = 182 bits (462), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 107/346 (30%), Positives = 176/346 (50%), Gaps = 42/346 (12%)
Query: 119 EILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAK 178
+I++ G P + + L+ C+ + A VF+E +G V++ LI+G C A+
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 179 NLDEGFRL--------------------KSV---------------MEGSGMRPDVYTYS 203
+DE L KS+ ME +G++P+++TY+
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 204 ALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIV 263
LI+ LC + + + A LL +M E+GL PN + + LI+G+CK G I+ A D +V
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVD------VV 416
Query: 264 DEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRG 323
+ M + L+P+ TY L+ G+CK ++ A+ + +M++R + D V + +LI G CR
Sbjct: 417 ELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRS 475
Query: 324 GKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETY 383
G A R+L M GL PD TYT +ID CK+ + L + G P V Y
Sbjct: 476 GNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMY 535
Query: 384 NALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHG 429
AL++G CK G++ A+++L+ ML +P+ +T+N L+ G C G
Sbjct: 536 TALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADG 581
Score = 182 bits (461), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 126/442 (28%), Positives = 218/442 (49%), Gaps = 21/442 (4%)
Query: 26 ARDLLHLIVSKKGMGSSASLFASILETR-GTHLPGLVLDALMIVYVDLGFLDDAIQCFRL 84
A + H I S +AS+L G+V +++ + DA+ L
Sbjct: 106 ALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDL 165
Query: 85 LRK----HYFRIPAR---GC-RCLIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNVLM 136
RK F + + GC L++ + R L Y+E+L+ P++Y +N ++
Sbjct: 166 CRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMV 225
Query: 137 HKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMR 196
+ CK G +++A + + GL ++ +LI G+C+ K+LD F++ + M G R
Sbjct: 226 NGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCR 285
Query: 197 PDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDM 256
+ Y+ LI+GLC R+D+A L +M + P +T LI C + R
Sbjct: 286 RNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSER------K 339
Query: 257 KEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTAL 316
EA +V EM G+ P+ TYT+L+D C + E A ++ +M+++G+ + + + AL
Sbjct: 340 SEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNAL 399
Query: 317 ISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGH 376
I+G+C+ G + +A ++ M L P+ TY +I +CK+ + +L +M
Sbjct: 400 INGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKV 458
Query: 377 LPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPED--- 433
LP V TYN+L++G C+ G +A LL M D G+VPD TY +++ CK E+
Sbjct: 459 LPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACD 518
Query: 434 -FDKLQSEKGLVSDYACYTSLV 454
FD L+ +KG+ + YT+L+
Sbjct: 519 LFDSLE-QKGVNPNVVMYTALI 539
Score = 179 bits (454), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 112/347 (32%), Positives = 185/347 (53%), Gaps = 10/347 (2%)
Query: 119 EILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAK 178
E + Y + +N L++ L + G + + + V+ E + + ++N ++NG+CK
Sbjct: 173 ERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLG 232
Query: 179 NLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFT 238
N++E + S + +G+ PD +TY++LI G C+ LD A + +EM +G N+V +T
Sbjct: 233 NVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYT 292
Query: 239 TLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIR 298
LI G C RID A D+ K+ D+ C P TYT+L+ C AL++
Sbjct: 293 HLIHGLCVARRIDEAMDL--FVKMKDDECF----PTVRTYTVLIKSLCGSERKSEALNLV 346
Query: 299 KEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKN 358
KEM + GI+ + +T LI C K +A +L +ML+ GL P+ TY +I+ +CK
Sbjct: 347 KEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKR 406
Query: 359 GDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITY 418
G + +++ M S P TYN L+ G CK + A +L+ ML+ V+PD +TY
Sbjct: 407 GMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTY 465
Query: 419 NILLEGHCKHGNPEDFDKLQS---EKGLVSDYACYTSLVSKSSKYRQ 462
N L++G C+ GN + +L S ++GLV D YTS++ K ++
Sbjct: 466 NSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKR 512
Score = 135 bits (341), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 161/330 (48%), Gaps = 25/330 (7%)
Query: 127 PSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRL 186
P+ FN L+H LC +GK+K+A ++ ++ K GL T + LI+ K + D +
Sbjct: 565 PNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSR 624
Query: 187 KSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCK 246
M SG +PD +TY+ I C+E RL DAE ++ +M E G++P+ +++LI G+
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGD 684
Query: 247 NGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLD---------------GFCKEGDL 291
G+ + A D ++ M G P + T+ L+ C ++
Sbjct: 685 LGQTNFAFD------VLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNM 738
Query: 292 ---ESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLK-VGLKPDDAT 347
++ +++ ++M++ + + ++ LI G C G + AE++ M + G+ P +
Sbjct: 739 MEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELV 798
Query: 348 YTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTML 407
+ ++ C CK +++ +M GHLP +E+ L+ GL K G+ + + +L
Sbjct: 799 FNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLL 858
Query: 408 DLGVVPDDITYNILLEGHCKHGNPEDFDKL 437
G D++ + I+++G K G E F +L
Sbjct: 859 QCGYYEDELAWKIIIDGVGKQGLVEAFYEL 888
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 119/285 (41%), Gaps = 48/285 (16%)
Query: 117 YLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCK 176
+ ++L G P + + + C+EG++ DA+ + + + G+ ++++LI G+
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGD 684
Query: 177 AKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCK----ENRLDDAEL------------ 220
+ F + M +G P +T+ +LI L + + + + EL
Sbjct: 685 LGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTV 744
Query: 221 --LLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDM---------------------- 256
LL +M E +TPN + LI G C+ G + +A +
Sbjct: 745 VELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLS 804
Query: 257 --------KEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIEL 308
EA K+VD+M G P + +L+ G K+G+ E + + +++ G
Sbjct: 805 CCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYE 864
Query: 309 DNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVID 353
D +A+ +I G + G V + M K G K TY+++I+
Sbjct: 865 DELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIE 909
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 195 bits (496), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 113/330 (34%), Positives = 185/330 (56%), Gaps = 13/330 (3%)
Query: 123 YGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDE 182
YG S +Y F +L+H C+ ++ A V + K G + V+F +L++G C + +
Sbjct: 100 YGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGD 159
Query: 183 GFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLID 242
F L +M SG P+V Y+ LI+GLCK L+ A LL+EM ++GL + V + TL+
Sbjct: 160 AFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLT 219
Query: 243 GHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMI 302
G C +GR +A +++ +M +NPD +T+T L+D F K+G+L+ A ++ KEMI
Sbjct: 220 GLCYSGR------WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMI 273
Query: 303 KRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTK 362
+ ++ +NV + ++I+G C G++ +A++ M G P+ TY +I FCK
Sbjct: 274 QSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVD 333
Query: 363 TGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILL 422
G +L + M +G + TYN L++G C+ G+L+ A + M+ V PD IT+ ILL
Sbjct: 334 EGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILL 393
Query: 423 EGHCKHGNPED----FDKL-QSEK--GLVS 445
G C +G E FD + +SEK G+V+
Sbjct: 394 HGLCVNGEIESALVKFDDMRESEKYIGIVA 423
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 174/324 (53%), Gaps = 9/324 (2%)
Query: 124 GYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEG 183
GY P+V V+N L+ LCK G++ A + +E K+GL A V++NTL+ G C + +
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 184 FRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDG 243
R+ M + PDV T++ALI+ K+ LD+A+ L EM + + PN+V + ++I+G
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290
Query: 244 HCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIK 303
C +GR + +A+K D M + G P+ +TY L+ GFCK ++ + + + M
Sbjct: 291 LCMHGR------LYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344
Query: 304 RGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKT 363
G D + LI G+C+ GK+ A + M+ + PD T+ +++ C NG+ ++
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIES 404
Query: 364 GFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLE 423
+MR + YN +++GLCK +++ A L + GV PD TY I++
Sbjct: 405 ALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMIL 464
Query: 424 GHCKHGNPEDFDKL---QSEKGLV 444
G CK+G + D+L E+G++
Sbjct: 465 GLCKNGPRREADELIRRMKEEGII 488
Score = 174 bits (442), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 106/314 (33%), Positives = 162/314 (51%), Gaps = 9/314 (2%)
Query: 144 KIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYS 203
+ +DA +F E + V F L+ + + ME G+ D+Y+++
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 204 ALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIV 263
LI+ C+ +RL A +L +M + G P+ V F +L+ G C RI GD A +V
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRI---GD---AFSLV 164
Query: 264 DEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRG 323
M +G P+ + Y L+DG CK G+L AL++ EM K+G+ D V + L++G C
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 324 GKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETY 383
G+ +A RMLR+M+K + PD T+T +ID F K G+ L KEM P TY
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 384 NALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPEDFDKL---QSE 440
N+++NGLC HG+L +A D M G P+ +TYN L+ G CK ++ KL S
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344
Query: 441 KGLVSDYACYTSLV 454
+G +D Y +L+
Sbjct: 345 EGFNADIFTYNTLI 358
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 157/337 (46%), Gaps = 31/337 (9%)
Query: 9 AYSTMVHFLVAHKMHSQARDLLHLIVSKKGMGSSASLFASILETRGTHLPGLVLDALMIV 68
Y+T++ L + + A +LL+ + KKG+G+ T T L GL
Sbjct: 178 VYNTLIDGLCKNGELNIALELLNEM-EKKGLGADVV-------TYNTLLTGLCYS----- 224
Query: 69 YVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYLEILDYGYSPS 128
G DA + R + K LID ++ Y E++ P+
Sbjct: 225 ----GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPN 280
Query: 129 VYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKS 188
+N +++ LC G++ DA+ FD +G V++NTLI+G CK + +DEG +L
Sbjct: 281 NVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQ 340
Query: 189 VMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNG 248
M G D++TY+ LI+G C+ +L A + M R +TP+ + L+ G C NG
Sbjct: 341 RMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNG 400
Query: 249 RIDMA----GDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKR 304
I+ A DM+E+ K + G+ + Y I++ G CK +E A ++ +
Sbjct: 401 EIESALVKFDDMRESEKYI------GI----VAYNIMIHGLCKADKVEKAWELFCRLPVE 450
Query: 305 GIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGL 341
G++ D +T +I G C+ G EA+ ++R M + G+
Sbjct: 451 GVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 194 bits (494), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 111/349 (31%), Positives = 183/349 (52%), Gaps = 18/349 (5%)
Query: 97 CRCLIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFG 156
CRC +T LG +++ GY P FN L+ L EGK+ +A ++ D
Sbjct: 134 CRCC-----KTCFAYSVLG---KVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185
Query: 157 KRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLD 216
+ G V++N+++NG C++ + L ME ++ DV+TYS +I+ LC++ +D
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 217 DAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKI 276
A L EM +G+ + V + +L+ G CK AG + ++ +M + + P+ I
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCK------AGKWNDGALLLKDMVSREIVPNVI 299
Query: 277 TYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREM 336
T+ +LLD F KEG L+ A ++ KEMI RGI + + + L+ G+C ++ EA ML M
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 359
Query: 337 LKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQL 396
++ PD T+T +I +C G ++ + + G + TY+ L+ G C+ G++
Sbjct: 360 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI 419
Query: 397 KNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPED----FDKLQSEK 441
K A L M+ GV+PD +TY ILL+G C +G E F+ LQ K
Sbjct: 420 KLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 468
Score = 191 bits (484), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 167/297 (56%), Gaps = 6/297 (2%)
Query: 127 PSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRL 186
P+V FNVL+ KEGK+++A ++ E RG+ +++NTL++G+C L E +
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355
Query: 187 KSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCK 246
+M + PD+ T+++LI G C R+DD + + +RGL N V ++ L+ G C+
Sbjct: 356 LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 415
Query: 247 NGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGI 306
+G+I K A ++ EM ++G+ PD +TY ILLDG C G LE AL+I +++ K +
Sbjct: 416 SGKI------KLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469
Query: 307 ELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFR 366
+L V +T +I G C+GGKV +A + + G+KP+ TYT++I CK G
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 529
Query: 367 LLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLE 423
LL++M DG+ P TYN L+ + G L + L++ M G D + ++++
Sbjct: 530 LLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 586
Score = 191 bits (484), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 195/392 (49%), Gaps = 48/392 (12%)
Query: 91 RIPARGCR-------CLIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEG 143
R+ GC+ +++ + R+ ++ L ++ + V+ ++ ++ LC++G
Sbjct: 183 RMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG 242
Query: 144 KIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYS 203
I A +F E +G+ ++ V++N+L+ G CKA ++G L M + P+V T++
Sbjct: 243 CIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFN 302
Query: 204 ALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIV 263
L++ KE +L +A L EM RG++PN + + TL+DG+C R + EA ++
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNR------LSEANNML 356
Query: 264 DEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRG 323
D M N +PD +T+T L+ G+C ++ + + + + KRG+ + V ++ L+ GFC+
Sbjct: 357 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 416
Query: 324 GKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSD--------- 374
GK+ AE + +EM+ G+ PD TY +++D C NG + + ++++
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMY 476
Query: 375 --------------------------GHLPAVETYNALMNGLCKHGQLKNANMLLDTMLD 408
G P V TY +++GLCK G L AN+LL M +
Sbjct: 477 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536
Query: 409 LGVVPDDITYNILLEGHCKHGNPEDFDKLQSE 440
G P+D TYN L+ H + G+ KL E
Sbjct: 537 DGNAPNDCTYNTLIRAHLRDGDLTASAKLIEE 568
Score = 148 bits (374), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 154/314 (49%), Gaps = 9/314 (2%)
Query: 144 KIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYS 203
K DA +F E + + V F+ + + K + +E +G+ ++YT +
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 204 ALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIV 263
+IN C+ + A +L ++ + G P+ F TLI G + + G + EA +V
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKG------LFLEGKVSEAVVLV 181
Query: 264 DEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRG 323
D M NG PD +TY +++G C+ GD ALD+ ++M +R ++ D ++ +I CR
Sbjct: 182 DRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRD 241
Query: 324 GKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETY 383
G + A + +EM G+K TY ++ CK G G LLK+M S +P V T+
Sbjct: 242 GCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITF 301
Query: 384 NALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPEDFDK---LQSE 440
N L++ K G+L+ AN L M+ G+ P+ ITYN L++G+C + + L
Sbjct: 302 NVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 361
Query: 441 KGLVSDYACYTSLV 454
D +TSL+
Sbjct: 362 NKCSPDIVTFTSLI 375
Score = 109 bits (272), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 120/235 (51%), Gaps = 7/235 (2%)
Query: 50 LETRGTHLPGLV-LDALMIVYVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTN 108
L R P +V +L+ Y + +DD ++ FR + K A L+ ++
Sbjct: 358 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSG 417
Query: 109 LPTVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFN 168
+ + E++ +G P V + +L+ LC GK++ A +F++ K + V +
Sbjct: 418 KIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYT 477
Query: 169 TLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCER 228
T+I G CK +++ + L + G++P+V TY+ +I+GLCK+ L +A +LL +M E
Sbjct: 478 TIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEED 537
Query: 229 GLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLD 283
G PND + TLI H ++ GD+ + K+++EM + G + D + +++D
Sbjct: 538 GNAPNDCTYNTLIRAHLRD------GDLTASAKLIEEMKSCGFSADASSIKMVID 586
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 115/272 (42%), Gaps = 64/272 (23%)
Query: 116 FYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHC 175
Y E++ G SP++ +N LM C + ++ +A + D + V+F +LI G+C
Sbjct: 320 LYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 379
Query: 176 KAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDV 235
K +D+G ++ + G+ + TYS L+ G C+ ++ AE L EM G+ P+ +
Sbjct: 380 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439
Query: 236 IFTTLIDGHCKNGRIDMA----GDMKEAR---------KIVDEMCT-------------- 268
+ L+DG C NG+++ A D+++++ I++ MC
Sbjct: 440 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499
Query: 269 --NGLNPDKITYTILLDGFC-----------------------------------KEGDL 291
G+ P+ +TYT+++ G C ++GDL
Sbjct: 500 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDL 559
Query: 292 ESALDIRKEMIKRGIELDNVAFTALISGFCRG 323
++ + +EM G D + +I G
Sbjct: 560 TASAKLIEEMKSCGFSADASSIKMVIDMLLSG 591
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 67/151 (44%), Gaps = 4/151 (2%)
Query: 59 GLVLDALMIVYVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYL 118
G++LD L D G L+ A++ F L+K + +I+ M + +
Sbjct: 442 GILLDGL----CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFC 497
Query: 119 EILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAK 178
+ G P+V + V++ LCK+G + +A ++ + + G ++NTLI H +
Sbjct: 498 SLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDG 557
Query: 179 NLDEGFRLKSVMEGSGMRPDVYTYSALINGL 209
+L +L M+ G D + +I+ L
Sbjct: 558 DLTASAKLIEEMKSCGFSADASSIKMVIDML 588
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 194 bits (494), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 110/340 (32%), Positives = 184/340 (54%), Gaps = 11/340 (3%)
Query: 97 CRCLIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFG 156
C L++ +++ P + F +++ G+ P + F L++ C ++++A + ++
Sbjct: 110 CNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMV 169
Query: 157 KRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLD 216
+ G+ V + T+I+ CK +++ L ME G+RPDV Y++L+NGLC R
Sbjct: 170 EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWR 229
Query: 217 DAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKI 276
DA+ LL M +R + P+ + F LID K G+ +A ++ +EM + P+
Sbjct: 230 DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKF------LDAEELYNEMIRMSIAPNIF 283
Query: 277 TYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREM 336
TYT L++GFC EG ++ A + M +G D VA+T+LI+GFC+ KV +A ++ EM
Sbjct: 284 TYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM 343
Query: 337 LKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQL 396
+ GL + TYT +I F + G + M S G P + TYN L++ LC +G++
Sbjct: 344 SQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKV 403
Query: 397 KNANMLLDTM----LDLGVVPDDITYNILLEGHCKHGNPE 432
K A M+ + M +D GV P+ TYN+LL G C +G E
Sbjct: 404 KKALMIFEDMQKREMD-GVAPNIWTYNVLLHGLCYNGKLE 442
Score = 180 bits (456), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 172/349 (49%), Gaps = 44/349 (12%)
Query: 119 EILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAK 178
++++ G P V ++ ++ LCK G + A +FD+ G+ V + +L+NG C +
Sbjct: 167 QMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSG 226
Query: 179 NLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFT 238
+ L M ++PDV T++ALI+ KE + DAE L +EM + PN +T
Sbjct: 227 RWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYT 286
Query: 239 TLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIR 298
+LI+G C G +D EAR++ M T G PD + YT L++GFCK ++ A+ I
Sbjct: 287 SLINGFCMEGCVD------EARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIF 340
Query: 299 KEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKN 358
EM ++G+ + + +T LI GF + GK A+ + M+ G+ P+ TY +++ C C N
Sbjct: 341 YEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYN 400
Query: 359 GDTKTGFRLLKEMRS---DGHLPAVETYNALMNGLC------------------------ 391
G K + ++M+ DG P + TYN L++GLC
Sbjct: 401 GKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGI 460
Query: 392 -----------KHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHG 429
K G++KNA L ++ GV P+ +TY ++ G + G
Sbjct: 461 ITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREG 509
Score = 172 bits (435), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 158/305 (51%), Gaps = 6/305 (1%)
Query: 127 PSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRL 186
PS+ F L++ + K K + D G+ + N L+N C++
Sbjct: 70 PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSF 129
Query: 187 KSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCK 246
M G PD+ T+++LING C NR+++A ++++M E G+ P+ V++TT+ID CK
Sbjct: 130 LGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCK 189
Query: 247 NGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGI 306
NG ++ A + D+M G+ PD + YT L++G C G A + + M KR I
Sbjct: 190 NGHVNYA------LSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKI 243
Query: 307 ELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFR 366
+ D + F ALI F + GK ++AE + EM+++ + P+ TYT +I+ FC G +
Sbjct: 244 KPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQ 303
Query: 367 LLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHC 426
+ M + G P V Y +L+NG CK ++ +A + M G+ + ITY L++G
Sbjct: 304 MFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFG 363
Query: 427 KHGNP 431
+ G P
Sbjct: 364 QVGKP 368
Score = 162 bits (410), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 149/296 (50%), Gaps = 9/296 (3%)
Query: 163 TAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLL 222
+ + F L+N K K D L ++ G+ D+YT + L+N C+ ++ A L
Sbjct: 71 SIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFL 130
Query: 223 HEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILL 282
+M + G P+ V FT+LI+G C R M+EA +V++M G+ PD + YT ++
Sbjct: 131 GKMMKLGFEPDIVTFTSLINGFCLGNR------MEEAMSMVNQMVEMGIKPDVVMYTTII 184
Query: 283 DGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLK 342
D CK G + AL + +M GI D V +T+L++G C G+ +A+ +LR M K +K
Sbjct: 185 DSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIK 244
Query: 343 PDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANML 402
PD T+ +ID F K G L EM P + TY +L+NG C G + A +
Sbjct: 245 PDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304
Query: 403 LDTMLDLGVVPDDITYNILLEGHCKHGNPEDFDKL---QSEKGLVSDYACYTSLVS 455
M G PD + Y L+ G CK +D K+ S+KGL + YT+L+
Sbjct: 305 FYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQ 360
Score = 155 bits (393), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 98/290 (33%), Positives = 155/290 (53%), Gaps = 13/290 (4%)
Query: 127 PSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRL 186
P V FN L+ KEGK DA+ +++E + + ++ +LING C +DE ++
Sbjct: 245 PDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304
Query: 187 KSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCK 246
+ME G PDV Y++LING CK ++DDA + +EM ++GLT N + +TTLI G +
Sbjct: 305 FYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQ 364
Query: 247 NGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGI 306
G+ ++A +++ M + G+ P+ TY +LL C G ++ AL I ++M KR
Sbjct: 365 VGKPNVA------QEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKR-- 416
Query: 307 ELDNVA-----FTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDT 361
E+D VA + L+ G C GK+ +A + +M K + TYT++I CK G
Sbjct: 417 EMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKV 476
Query: 362 KTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGV 411
K L + S G P V TY +++GL + G A++L M + GV
Sbjct: 477 KNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 132 bits (331), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 131/245 (53%), Gaps = 9/245 (3%)
Query: 214 RLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNP 273
+ ++A L M E P+ + FT L++ K + D+ ++ + +I+ G++
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIM------GVSH 105
Query: 274 DKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERML 333
D T +L++ FC+ A +M+K G E D V FT+LI+GFC G ++ EA M+
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMV 165
Query: 334 REMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKH 393
+M+++G+KPD YT +ID CKNG L +M + G P V Y +L+NGLC
Sbjct: 166 NQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNS 225
Query: 394 GQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPEDFDKLQSE---KGLVSDYACY 450
G+ ++A+ LL M + PD IT+N L++ K G D ++L +E + + Y
Sbjct: 226 GRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTY 285
Query: 451 TSLVS 455
TSL++
Sbjct: 286 TSLIN 290
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 65/108 (60%)
Query: 124 GYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEG 183
G +P+++ +NVL+H LC GK++ A MVF++ KR + +++ +I G CKA +
Sbjct: 420 GVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNA 479
Query: 184 FRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLT 231
L + G++P+V TY+ +I+GL +E +A +L +M E G++
Sbjct: 480 VNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
>sp|Q9ZUE9|PP149_ARATH Pentatricopeptide repeat-containing protein At2g06000
OS=Arabidopsis thaliana GN=At2g06000 PE=2 SV=1
Length = 536
Score = 194 bits (494), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 167/300 (55%), Gaps = 7/300 (2%)
Query: 131 VFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVM 190
V N L++ L K +++DA +FDE + +FN LI G C ++ L VM
Sbjct: 173 VVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVM 232
Query: 191 EGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGL-TPNDVIFTTLIDGHCKNGR 249
G G PD+ TY+ LI G CK N L+ A + ++ + +P+ V +T++I G+CK
Sbjct: 233 SGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCK--- 289
Query: 250 IDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELD 309
AG M+EA ++D+M G+ P +T+ +L+DG+ K G++ +A +IR +MI G D
Sbjct: 290 ---AGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPD 346
Query: 310 NVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLK 369
V FT+LI G+CR G+V + R+ EM G+ P+ TY+++I+ C LL
Sbjct: 347 VVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLG 406
Query: 370 EMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHG 429
++ S +P YN +++G CK G++ AN++++ M PD IT+ IL+ GHC G
Sbjct: 407 QLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKG 466
Score = 166 bits (421), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 154/299 (51%), Gaps = 7/299 (2%)
Query: 132 FNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRL-KSVM 190
FN+L+ LC GK + A + G V++NTLI G CK+ L++ + K V
Sbjct: 209 FNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK 268
Query: 191 EGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRI 250
GS PDV TY+++I+G CK ++ +A LL +M G+ P +V F L+DG+ K
Sbjct: 269 SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK---- 324
Query: 251 DMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDN 310
AG+M A +I +M + G PD +T+T L+DG+C+ G + + +EM RG+ +
Sbjct: 325 --AGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNA 382
Query: 311 VAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKE 370
++ LI+ C ++++A +L ++ + P Y VID FCK G +++E
Sbjct: 383 FTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEE 442
Query: 371 MRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHG 429
M P T+ L+ G C G++ A + M+ +G PD IT + LL K G
Sbjct: 443 MEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAG 501
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 160/325 (49%), Gaps = 23/325 (7%)
Query: 124 GYSPSVYVFNVLMHKLCKEGKIKDA-QMVFDEFGKRGLHATAVSFNTLINGHCK------ 176
G SP+ + L+ ++GK+ A ++ F G + N+L+N K
Sbjct: 133 GVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEG---CCMVVNSLLNTLVKLDRVED 189
Query: 177 -AKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDV 235
K DE R +S D T++ LI GLC + + A LL M G P+ V
Sbjct: 190 AMKLFDEHLRFQSC-------NDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIV 242
Query: 236 IFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESAL 295
+ TLI G CK+ ++ A +M + K +C+ PD +TYT ++ G+CK G + A
Sbjct: 243 TYNTLIQGFCKSNELNKASEMFKDVK-SGSVCS----PDVVTYTSMISGYCKAGKMREAS 297
Query: 296 DIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCF 355
+ +M++ GI NV F L+ G+ + G+++ AE + +M+ G PD T+T +ID +
Sbjct: 298 SLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGY 357
Query: 356 CKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDD 415
C+ G GFRL +EM + G P TY+ L+N LC +L A LL + ++P
Sbjct: 358 CRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQP 417
Query: 416 ITYNILLEGHCKHGNPEDFDKLQSE 440
YN +++G CK G + + + E
Sbjct: 418 FMYNPVIDGFCKAGKVNEANVIVEE 442
Score = 146 bits (368), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 129/242 (53%), Gaps = 6/242 (2%)
Query: 126 SPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFR 185
SP V + ++ CK GK+++A + D+ + G++ T V+FN L++G+ KA +
Sbjct: 274 SPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEE 333
Query: 186 LKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHC 245
++ M G PDV T+++LI+G C+ ++ L EM RG+ PN ++ LI+ C
Sbjct: 334 IRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALC 393
Query: 246 KNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRG 305
R + +AR+++ ++ + + P Y ++DGFCK G + A I +EM K+
Sbjct: 394 NENR------LLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKK 447
Query: 306 IELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGF 365
+ D + FT LI G C G++ EA + +M+ +G PD T + ++ C K G K +
Sbjct: 448 CKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAY 507
Query: 366 RL 367
L
Sbjct: 508 HL 509
Score = 138 bits (348), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 115/211 (54%), Gaps = 6/211 (2%)
Query: 119 EILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAK 178
++L G P+ FNVL+ K G++ A+ + + G V+F +LI+G+C+
Sbjct: 302 DMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVG 361
Query: 179 NLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFT 238
+ +GFRL M GM P+ +TYS LIN LC ENRL A LL ++ + + P ++
Sbjct: 362 QVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYN 421
Query: 239 TLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIR 298
+IDG CK G+++ EA IV+EM PDKIT+TIL+ G C +G + A+ I
Sbjct: 422 PVIDGFCKAGKVN------EANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIF 475
Query: 299 KEMIKRGIELDNVAFTALISGFCRGGKVVEA 329
+M+ G D + ++L+S + G EA
Sbjct: 476 HKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 36/155 (23%)
Query: 337 LKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLP------------------ 378
K+ ++ TY ++ CK G ++ + M+SDG P
Sbjct: 95 FKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKL 154
Query: 379 -----------AVE----TYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLE 423
VE N+L+N L K ++++A L D L D T+NIL+
Sbjct: 155 HFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIR 214
Query: 424 GHCKHGNPEDFDKLQSEKGLVSDYACYTSLVSKSS 458
G C G E +L G++S + C +V+ ++
Sbjct: 215 GLCGVGKAEKALELL---GVMSGFGCEPDIVTYNT 246
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 194 bits (493), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 118/371 (31%), Positives = 193/371 (52%), Gaps = 24/371 (6%)
Query: 61 VLDALMIV--YVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYL 118
+ DA+ +V V++G+ D + L+ + A LIDRM++
Sbjct: 164 ISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQR----------- 212
Query: 119 EILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAK 178
G P + + +++ LCK G A + ++ + A V ++T+I+ CK +
Sbjct: 213 -----GCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYR 267
Query: 179 NLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFT 238
+ D+ L + ME G+RP+V TYS+LI+ LC R DA LL +M ER + PN V F+
Sbjct: 268 HEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFS 327
Query: 239 TLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIR 298
LID K G+ + +A K+ +EM ++P+ TY+ L++GFC L A +
Sbjct: 328 ALIDAFVKKGK------LVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQML 381
Query: 299 KEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKN 358
+ MI++ + V + LI+GFC+ +V + + REM + GL + TYT +I F +
Sbjct: 382 ELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQA 441
Query: 359 GDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITY 418
D + K+M S G P + TYN L++GLCK+G+L A ++ + + + PD TY
Sbjct: 442 RDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 501
Query: 419 NILLEGHCKHG 429
NI++EG CK G
Sbjct: 502 NIMIEGMCKAG 512
Score = 172 bits (436), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 201/386 (52%), Gaps = 15/386 (3%)
Query: 75 LDDAIQCFRLL---RKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYLEILDYGYSPSVYV 131
LDDAI F ++ R I I +M + +L ++ G +EIL G S ++Y
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDL-VISFGEKMEIL--GISHNLYT 115
Query: 132 FNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVME 191
+N+L++ C+ ++ A + + K G V+ N+L+NG C + + L M
Sbjct: 116 YNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMV 175
Query: 192 GSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRID 251
G +PD T++ LI+GL N+ +A L+ M +RG P+ V + +++G CK G D
Sbjct: 176 EMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTD 235
Query: 252 MAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNV 311
+A ++ +++M + + + Y+ ++D CK + AL++ EM +G+ + +
Sbjct: 236 LALNL------LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 289
Query: 312 AFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEM 371
+++LIS C G+ +A R+L +M++ + P+ T++ +ID F K G +L +EM
Sbjct: 290 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEM 349
Query: 372 RSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNP 431
P + TY++L+NG C +L A +L+ M+ +P+ +TYN L+ G CK
Sbjct: 350 IKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRV 409
Query: 432 E---DFDKLQSEKGLVSDYACYTSLV 454
+ + + S++GLV + YT+L+
Sbjct: 410 DKGMELFREMSQRGLVGNTVTYTTLI 435
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 135/252 (53%), Gaps = 6/252 (2%)
Query: 113 TLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLIN 172
L + E+ + G P+V ++ L+ LC G+ DA + + +R ++ V+F+ LI+
Sbjct: 272 ALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALID 331
Query: 173 GHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTP 232
K L + +L M + P+++TYS+LING C +RL +A+ +L M + P
Sbjct: 332 AFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLP 391
Query: 233 NDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLE 292
N V + TLI+G CK R+D + ++ EM GL + +TYT L+ GF + D +
Sbjct: 392 NVVTYNTLINGFCKAKRVD------KGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 445
Query: 293 SALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVI 352
+A + K+M+ G+ + + + L+ G C+ GK+ +A + + + ++PD TY ++I
Sbjct: 446 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 505
Query: 353 DCFCKNGDTKTG 364
+ CK G K G
Sbjct: 506 EGMCKAGKWKMG 517
Score = 132 bits (333), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 156/315 (49%), Gaps = 9/315 (2%)
Query: 144 KIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYS 203
++ DA +F + + + F+ L++ K D ME G+ ++YTY+
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 204 ALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIV 263
LIN C+ +RL A LL +M + G P+ V +L++G C RI +A +V
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRIS------DAVALV 171
Query: 264 DEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRG 323
D+M G PD +T+T L+ G A+ + M++RG + D V + A+++G C+
Sbjct: 172 DQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKR 231
Query: 324 GKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETY 383
G A +L +M ++ + Y+ VID CK L EM + G P V TY
Sbjct: 232 GDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 291
Query: 384 NALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPEDFDKLQSE--- 440
++L++ LC +G+ +A+ LL M++ + P+ +T++ L++ K G +KL E
Sbjct: 292 SSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIK 351
Query: 441 KGLVSDYACYTSLVS 455
+ + + Y+SL++
Sbjct: 352 RSIDPNIFTYSSLIN 366
Score = 105 bits (261), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 130/259 (50%), Gaps = 9/259 (3%)
Query: 200 YTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEA 259
Y Y ++ + LDDA L M + P+ + F+ L+ K + D+ E
Sbjct: 44 YDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEK 103
Query: 260 RKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISG 319
+I+ G++ + TY IL++ FC+ L AL + +M+K G E D V +L++G
Sbjct: 104 MEIL------GISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNG 157
Query: 320 FCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPA 379
FC G ++ +A ++ +M+++G KPD T+T +I + L+ M G P
Sbjct: 158 FCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPD 217
Query: 380 VETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPEDFDKLQS 439
+ TY A++NGLCK G A LL+ M + + + Y+ +++ CK+ + +D L +
Sbjct: 218 LVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFT 277
Query: 440 E---KGLVSDYACYTSLVS 455
E KG+ + Y+SL+S
Sbjct: 278 EMENKGVRPNVITYSSLIS 296
Score = 82.8 bits (203), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 69/128 (53%)
Query: 127 PSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRL 186
P+V +N L++ CK ++ +F E +RGL V++ TLI+G +A++ D +
Sbjct: 391 PNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 450
Query: 187 KSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCK 246
M G+ P++ TY+ L++GLCK +L A ++ + + P+ + +I+G CK
Sbjct: 451 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 510
Query: 247 NGRIDMAG 254
G+ M G
Sbjct: 511 AGKWKMGG 518
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 193 bits (491), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/364 (31%), Positives = 185/364 (50%), Gaps = 6/364 (1%)
Query: 75 LDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNV 134
+++A + F L++KH +ID +T G Y EIL P+V VF
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309
Query: 135 LMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSG 194
L+ CK ++ A+ +F K G+ +N LI+GHCK+ N+ E L S ME
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369
Query: 195 MRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAG 254
+ PDV+TY+ LINGLC E+++ +A L +M + P+ + +LI G+CK
Sbjct: 370 LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEY------ 423
Query: 255 DMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFT 314
+M++A + EM +G+ P+ IT++ L+DG+C D+++A+ + EM +GI D V +T
Sbjct: 424 NMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYT 483
Query: 315 ALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSD 374
ALI + + EA R+ +ML+ G+ P+D T+ ++D F K G +E
Sbjct: 484 ALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQ 543
Query: 375 GHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPEDF 434
+ L+ GLC++G + A+ M G+ PD +Y +L+GH + D
Sbjct: 544 RSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDT 603
Query: 435 DKLQ 438
LQ
Sbjct: 604 MMLQ 607
Score = 185 bits (469), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 125/491 (25%), Positives = 235/491 (47%), Gaps = 52/491 (10%)
Query: 7 LHAYSTMVHFLVAHKMHSQARDLLHLIVSKKGMGSSAS-----LFASILETRGTHLPGLV 61
L ++S ++H L ++ AR L+ ++ + S S LF ++ + + V
Sbjct: 75 LQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNMSHRLFNALEDIQSPKFSIGV 134
Query: 62 LDALMIVYVDLGFLDDAIQCFR-----------------LLRKHYFRIPARGCRCLIDRM 104
L++ ++++G ++A+ R L+R+ F + +I R
Sbjct: 135 FSLLIMEFLEMGLFEEALWVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRG 194
Query: 105 MRTNLPTVTLGFYL------------------EILDYGYSPSVYVFNVLMHKLCKEGKIK 146
+ +P V + F L E+ G P+VY++ + + LC++ K++
Sbjct: 195 L---VPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKME 251
Query: 147 DAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALI 206
+A+ +F+ K G+ +++ +I+G+CK N+ + + L + + + P+V + L+
Sbjct: 252 EAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLV 311
Query: 207 NGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEM 266
+G CK L A L M + G+ PN ++ LI GHCK +G+M EA ++ EM
Sbjct: 312 DGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCK------SGNMLEAVGLLSEM 365
Query: 267 CTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKV 326
+ L+PD TYTIL++G C E + A + ++M I + + +LI G+C+ +
Sbjct: 366 ESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNM 425
Query: 327 VEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNAL 386
+A + EM G++P+ T++ +ID +C D K L EM G +P V TY AL
Sbjct: 426 EQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTAL 485
Query: 387 MNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPE---DFDKLQSEKGL 443
++ K +K A L ML+ G+ P+D T+ L++G K G DF + +++
Sbjct: 486 IDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRS 545
Query: 444 VSDYACYTSLV 454
++ +T L+
Sbjct: 546 CWNHVGFTCLI 556
Score = 115 bits (288), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 140/309 (45%), Gaps = 41/309 (13%)
Query: 99 CLIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKR 158
CLI ++ +G E+ SP V+ + +L++ LC E ++ +A +F +
Sbjct: 344 CLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNE 403
Query: 159 GLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDA 218
+ ++ ++N+LI+G+CK N+++ L S M SG+ P++ T+S LI+G C + A
Sbjct: 404 RIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAA 463
Query: 219 ELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPD---- 274
L EM +G+ P+ V +T LID H K +MKEA ++ +M G++P+
Sbjct: 464 MGLYFEMTIKGIVPDVVTYTALIDAHFKEA------NMKEALRLYSDMLEAGIHPNDHTF 517
Query: 275 -------------------------------KITYTILLDGFCKEGDLESALDIRKEMIK 303
+ +T L++G C+ G + A +M
Sbjct: 518 ACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRS 577
Query: 304 RGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKT 363
GI D ++ +++ G + ++ + + +M+K G+ P+ ++ + NG K+
Sbjct: 578 CGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKS 637
Query: 364 GFRLLKEMR 372
L R
Sbjct: 638 ACFLTNSSR 646
>sp|Q9ZUA2|PP141_ARATH Pentatricopeptide repeat-containing protein At2g01740
OS=Arabidopsis thaliana GN=At2g01740 PE=3 SV=1
Length = 559
Score = 193 bits (491), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 209/393 (53%), Gaps = 15/393 (3%)
Query: 77 DAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNVLM 136
+A+Q LRK C I +++ +N ++L F ++ GY+P FN ++
Sbjct: 4 EALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVV 63
Query: 137 HKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNL-DEGFRLKSVMEGSGM 195
+CK G++K A+ + + G +S+N+LI+GHC+ ++ L+S+ G
Sbjct: 64 SFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGF 123
Query: 196 --RPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMA 253
+PD+ ++++L NG K LD+ + + M + +PN V ++T ID CK+G + +A
Sbjct: 124 ICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVML-KCCSPNVVTYSTWIDTFCKSGELQLA 182
Query: 254 GDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAF 313
K M + L+P+ +T+T L+DG+CK GDLE A+ + KEM + + L+ V +
Sbjct: 183 ------LKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTY 236
Query: 314 TALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRS 373
TALI GFC+ G++ AE M M++ ++P+ YT +ID F + GD+ + L +M +
Sbjct: 237 TALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLN 296
Query: 374 DGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPED 433
G + Y +++GLC +G+LK A +++ M +VPD + + ++ + K G +
Sbjct: 297 QGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKA 356
Query: 434 ----FDKLQSEKGLVSDYACYTSLVSKSSKYRQ 462
+ KL E+G D ++++ +K Q
Sbjct: 357 AVNMYHKL-IERGFEPDVVALSTMIDGIAKNGQ 388
Score = 173 bits (439), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 170/364 (46%), Gaps = 59/364 (16%)
Query: 126 SPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFR 185
SP+V ++ + CK G+++ A F + L V+F LI+G+CKA +L+
Sbjct: 160 SPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVS 219
Query: 186 LKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHC 245
L M M +V TY+ALI+G CK+ + AE + M E + PN +++TT+IDG
Sbjct: 220 LYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFF 279
Query: 246 KNGRIDMA-----------------------------GDMKEARKIVDEMCTNGLNPDKI 276
+ G D A G +KEA +IV++M + L PD +
Sbjct: 280 QRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMV 339
Query: 277 TYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVA------------------------ 312
+T +++ + K G +++A+++ ++I+RG E D VA
Sbjct: 340 IFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIE 399
Query: 313 ------FTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFR 366
+T LI C+ G +E ER+ ++ + GL PD YT I CK G+ F+
Sbjct: 400 KANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFK 459
Query: 367 LLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHC 426
L M +G L + Y L+ GL G + A + D ML+ G+ PD +++L+ +
Sbjct: 460 LKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYE 519
Query: 427 KHGN 430
K GN
Sbjct: 520 KEGN 523
Score = 142 bits (359), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 139/269 (51%), Gaps = 11/269 (4%)
Query: 113 TLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLIN 172
+ F ++L+ G + + V++ LC GK+K+A + ++ K L V F T++N
Sbjct: 287 AMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMN 346
Query: 173 GHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTP 232
+ K+ + + + G PDV S +I+G+ K +L +A +++ E+
Sbjct: 347 AYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA--IVYFCIEKA--- 401
Query: 233 NDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLE 292
NDV++T LID CK G D E ++ ++ GL PDK YT + G CK+G+L
Sbjct: 402 NDVMYTVLIDALCKEG------DFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLV 455
Query: 293 SALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVI 352
A ++ M++ G+ LD +A+T LI G G +VEA ++ EML G+ PD A + ++I
Sbjct: 456 DAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLI 515
Query: 353 DCFCKNGDTKTGFRLLKEMRSDGHLPAVE 381
+ K G+ LL +M+ G + AV
Sbjct: 516 RAYEKEGNMAAASDLLLDMQRRGLVTAVS 544
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 192 bits (489), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 119/365 (32%), Positives = 183/365 (50%), Gaps = 9/365 (2%)
Query: 70 VDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYLEILDYGYSPSV 129
+DLGFL A +R + F + R +++ + + F +IL G+
Sbjct: 173 LDLGFL--AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDS 230
Query: 130 YVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHA-TAVSFNTLINGHCKAKNLDEGFRLKS 188
++ L+ C+ ++DA VFD K A +VS++ LI+G C+ L+E F LK
Sbjct: 231 HIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKD 290
Query: 189 VMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNG 248
M G +P TY+ LI LC +D A L EM RG PN +T LIDG C++G
Sbjct: 291 QMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDG 350
Query: 249 RIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIEL 308
+I+ EA + +M + + P ITY L++G+CK+G + A ++ M KR +
Sbjct: 351 KIE------EANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKP 404
Query: 309 DNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLL 368
+ F L+ G CR GK +A +L+ ML GL PD +Y ++ID C+ G T ++LL
Sbjct: 405 NVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLL 464
Query: 369 KEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKH 428
M P T+ A++N CK G+ A+ L ML G+ D++T L++G CK
Sbjct: 465 SSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKV 524
Query: 429 GNPED 433
G D
Sbjct: 525 GKTRD 529
Score = 186 bits (473), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/340 (31%), Positives = 178/340 (52%), Gaps = 29/340 (8%)
Query: 119 EILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAK 178
E++ G P+V+ + VL+ LC++GKI++A V + K + + +++N LING+CK
Sbjct: 326 EMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDG 385
Query: 179 NLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFT 238
+ F L +VME +P+V T++ L+ GLC+ + A LL M + GL+P+ V +
Sbjct: 386 RVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYN 445
Query: 239 TLIDGHCKNGRIDMA-----------------------------GDMKEARKIVDEMCTN 269
LIDG C+ G ++ A G A + M
Sbjct: 446 VLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRK 505
Query: 270 GLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEA 329
G++ D++T T L+DG CK G AL I + ++K I + ++ +G KV E
Sbjct: 506 GISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEE 565
Query: 330 ERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNG 389
ML ++ K+GL P TYT ++D ++GD FR+L+ M+ G LP V Y ++NG
Sbjct: 566 LAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIING 625
Query: 390 LCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHG 429
LC+ G+++ A LL M D GV P+ +TY ++++G+ +G
Sbjct: 626 LCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNG 665
Score = 176 bits (446), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/389 (29%), Positives = 194/389 (49%), Gaps = 11/389 (2%)
Query: 81 CFRLLRKHY-FRIPARGCRCLIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNVLMHKL 139
CF LR+ + FR+ L+ + + +L + Y + G+ + + +++ L
Sbjct: 146 CFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNAL 205
Query: 140 CKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGS-GMRPD 198
CK G + A+M + K G + +L+ G C+ NL + ++ VM P+
Sbjct: 206 CKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPN 265
Query: 199 VYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKE 258
+YS LI+GLC+ RL++A L +M E+G P+ +T LI C G ID +
Sbjct: 266 SVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLID------K 319
Query: 259 ARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALIS 318
A + DEM G P+ TYT+L+DG C++G +E A + ++M+K I + + ALI+
Sbjct: 320 AFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALIN 379
Query: 319 GFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLP 378
G+C+ G+VV A +L M K KP+ T+ +++ C+ G LLK M +G P
Sbjct: 380 GYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSP 439
Query: 379 AVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPE---DFD 435
+ +YN L++GLC+ G + A LL +M + PD +T+ ++ CK G + F
Sbjct: 440 DIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFL 499
Query: 436 KLQSEKGLVSDYACYTSLVSKSSKYRQKR 464
L KG+ D T+L+ K + R
Sbjct: 500 GLMLRKGISLDEVTGTTLIDGVCKVGKTR 528
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 148/331 (44%), Gaps = 12/331 (3%)
Query: 63 DALMIVYVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYLEILD 122
+AL+ Y G + A + ++ K + R L++ + R P + +LD
Sbjct: 375 NALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLD 434
Query: 123 YGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDE 182
G SP + +NVL+ LC+EG + A + + ++F +IN CK D
Sbjct: 435 NGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADV 494
Query: 183 GFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLID 242
+M G+ D T + LI+G+CK + DA +L + V L
Sbjct: 495 ASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETL---------VKMRILTT 545
Query: 243 GHCKNGRIDMAG---DMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRK 299
H N +DM +KE ++ ++ GL P +TYT L+DG + GD+ + I +
Sbjct: 546 PHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILE 605
Query: 300 EMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNG 359
M G + +T +I+G C+ G+V EAE++L M G+ P+ TYT+++ + NG
Sbjct: 606 LMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNG 665
Query: 360 DTKTGFRLLKEMRSDGHLPAVETYNALMNGL 390
++ M G+ Y++L+ G
Sbjct: 666 KLDRALETVRAMVERGYELNDRIYSSLLQGF 696
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 151/354 (42%), Gaps = 25/354 (7%)
Query: 36 KKGMGSSASLFASILETRGTHLPGLVLDALMIVYVDLGFLDDAIQCFRLLRKHYFRIPAR 95
K+G AS F ++ +G L + L+ +G DA+ L K
Sbjct: 488 KQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPH 547
Query: 96 GCRCLIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEF 155
++D + + L +I G PSV + L+ L + G I + + +
Sbjct: 548 SLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELM 607
Query: 156 GKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRL 215
G + +ING C+ ++E +L S M+ SG+ P+ TY+ ++ G +L
Sbjct: 608 KLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKL 667
Query: 216 DDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGR-IDMAGD---------------MKEA 259
D A + M ERG ND I+++L+ G + + ID + + + E
Sbjct: 668 DRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINEL 727
Query: 260 RKIVDEM--CTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALI 317
+V+++ C +GL L+ CKEG + + D+ + +++RG+ L+ A ++
Sbjct: 728 ISVVEQLGGCISGL------CIFLVTRLCKEGRTDESNDLVQNVLERGVFLEK-AMDIIM 780
Query: 318 SGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEM 371
+C K + ++ +LK G P ++ +VI K GD + L+ E+
Sbjct: 781 ESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMEL 834
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 192 bits (488), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 172/348 (49%), Gaps = 29/348 (8%)
Query: 119 EILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAK 178
+++ G+ PS+ L++ C+ + ++A + D G V +NT+ING CK +
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR 198
Query: 179 NLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFT 238
+L+ + ME G+R D TY+ LI+GL R DA LL +M +R + PN + FT
Sbjct: 199 DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFT 258
Query: 239 TLIDGHCKNGRIDMA-----------------------------GDMKEARKIVDEMCTN 269
LID K G + A G + +A+ + D M +
Sbjct: 259 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 318
Query: 270 GLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEA 329
G PD +TY L+ GFCK +E + + EM +G+ D + LI G+C+ GK+ A
Sbjct: 319 GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVA 378
Query: 330 ERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNG 389
+++ M+ G+ PD TY +++DC C NG + ++++++ + TYN ++ G
Sbjct: 379 QKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQG 438
Query: 390 LCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPEDFDKL 437
LC+ +LK A L ++ GV PD I Y ++ G C+ G + DKL
Sbjct: 439 LCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKL 486
Score = 189 bits (481), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 107/329 (32%), Positives = 179/329 (54%), Gaps = 6/329 (1%)
Query: 104 MMRTNLPTVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHAT 163
+ + N + + Y ++ + G S +Y F +L+H C+ ++ A + + K G +
Sbjct: 89 IAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPS 148
Query: 164 AVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLH 223
V+ +L+NG C+ E L M+G G P+V Y+ +INGLCK L++A + +
Sbjct: 149 IVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFY 208
Query: 224 EMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLD 283
M ++G+ + V + TLI G +GR +A +++ +M ++P+ I +T L+D
Sbjct: 209 CMEKKGIRADAVTYNTLISGLSNSGR------WTDAARLLRDMVKRKIDPNVIFFTALID 262
Query: 284 GFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKP 343
F KEG+L A ++ KEMI+R + + + +LI+GFC G + +A+ M M+ G P
Sbjct: 263 TFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFP 322
Query: 344 DDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLL 403
D TY +I FCK+ + G +L EM G + TYN L++G C+ G+L A +
Sbjct: 323 DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 382
Query: 404 DTMLDLGVVPDDITYNILLEGHCKHGNPE 432
+ M+D GV PD +TYNILL+ C +G E
Sbjct: 383 NRMVDCGVSPDIVTYNILLDCLCNNGKIE 411
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/314 (35%), Positives = 163/314 (51%), Gaps = 9/314 (2%)
Query: 144 KIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYS 203
K DA +F E + + V F ++ K D L ME G+ D+Y+++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 204 ALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIV 263
LI+ C+ +RL A LL +M + G P+ V +L++G C+ R +EA +V
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNR------FQEAVSLV 172
Query: 264 DEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRG 323
D M G P+ + Y +++G CK DL +AL++ M K+GI D V + LISG
Sbjct: 173 DSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNS 232
Query: 324 GKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETY 383
G+ +A R+LR+M+K + P+ +T +ID F K G+ L KEM +P V TY
Sbjct: 233 GRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTY 292
Query: 384 NALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPEDFDKLQSE--- 440
N+L+NG C HG L +A + D M+ G PD +TYN L+ G CK ED KL E
Sbjct: 293 NSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTY 352
Query: 441 KGLVSDYACYTSLV 454
+GLV D Y +L+
Sbjct: 353 QGLVGDAFTYNTLI 366
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 160/310 (51%), Gaps = 6/310 (1%)
Query: 75 LDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNV 134
L++A++ F + K R A LI + + T +++ P+V F
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 259
Query: 135 LMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSG 194
L+ KEG + +A+ ++ E +R + ++N+LING C L + + +M G
Sbjct: 260 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 319
Query: 195 MRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAG 254
PDV TY+ LI G CK R++D L EM +GL + + TLI G+C+ G++++A
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVA- 378
Query: 255 DMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFT 314
+K+ + M G++PD +TY ILLD C G +E AL + +++ K +++D + +
Sbjct: 379 -----QKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYN 433
Query: 315 ALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSD 374
+I G CR K+ EA + R + + G+KPD Y +I C+ G + +L + M+ D
Sbjct: 434 IIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKED 493
Query: 375 GHLPAVETYN 384
G +P+ Y+
Sbjct: 494 GFMPSERIYD 503
Score = 152 bits (385), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 156/338 (46%), Gaps = 41/338 (12%)
Query: 123 YGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLING--------- 173
+G+ P+V ++N +++ LCK + +A VF K+G+ A AV++NTLI+G
Sbjct: 178 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 237
Query: 174 --------------------------HCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALIN 207
K NL E L M + P+V+TY++LIN
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
Query: 208 GLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMC 267
G C L DA+ + M +G P+ V + TLI G CK+ R++ + K+ EM
Sbjct: 298 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVE------DGMKLFCEMT 351
Query: 268 TNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVV 327
GL D TY L+ G+C+ G L A + M+ G+ D V + L+ C GK+
Sbjct: 352 YQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIE 411
Query: 328 EAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALM 387
+A M+ ++ K + D TY ++I C+ K + L + + G P Y ++
Sbjct: 412 KALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMI 471
Query: 388 NGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGH 425
+GLC+ G + A+ L M + G +P + Y+ L H
Sbjct: 472 SGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDH 509
Score = 149 bits (375), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 156/299 (52%), Gaps = 6/299 (2%)
Query: 50 LETRGTHLPGLVLDALMIVYVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNL 109
+E +G + + L+ + G DA + R + K LID ++
Sbjct: 210 MEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGN 269
Query: 110 PTVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNT 169
Y E++ P+V+ +N L++ C G + DA+ +FD +G V++NT
Sbjct: 270 LLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNT 329
Query: 170 LINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERG 229
LI G CK+K +++G +L M G+ D +TY+ LI+G C+ +L+ A+ + + M + G
Sbjct: 330 LITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 389
Query: 230 LTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEG 289
++P+ V + L+D C NG+I+ +A +V+++ + ++ D ITY I++ G C+
Sbjct: 390 VSPDIVTYNILLDCLCNNGKIE------KALVMVEDLQKSEMDVDIITYNIIIQGLCRTD 443
Query: 290 DLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATY 348
L+ A + + + ++G++ D +A+ +ISG CR G EA+++ R M + G P + Y
Sbjct: 444 KLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 502
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 67/126 (53%)
Query: 119 EILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAK 178
++D G SP + +N+L+ LC GKI+ A ++ ++ K + +++N +I G C+
Sbjct: 384 RMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTD 443
Query: 179 NLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFT 238
L E + L + G++PD Y +I+GLC++ +A+ L M E G P++ I+
Sbjct: 444 KLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 503
Query: 239 TLIDGH 244
+ H
Sbjct: 504 ETLRDH 509
>sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protein At3g54980,
mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2
SV=1
Length = 851
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 108/332 (32%), Positives = 173/332 (52%), Gaps = 30/332 (9%)
Query: 128 SVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLK 187
+V+V N ++ LCK+GK +A + + RG+ VS+N ++ GHC+ KN+D +
Sbjct: 442 NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVF 501
Query: 188 SVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKN 247
S + G++P+ YTYS LI+G + + +A +++ M + N V++ T+I+G CK
Sbjct: 502 SNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKV 561
Query: 248 GRIDMA------------------------------GDMKEARKIVDEMCTNGLNPDKIT 277
G+ A G+M A +EMC NG++P+ IT
Sbjct: 562 GQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVIT 621
Query: 278 YTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREML 337
YT L++G CK ++ AL++R EM +G++LD A+ ALI GFC+ + A + E+L
Sbjct: 622 YTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELL 681
Query: 338 KVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLK 397
+ GL P Y +I F G+ L K+M DG + TY L++GL K G L
Sbjct: 682 EEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLI 741
Query: 398 NANMLLDTMLDLGVVPDDITYNILLEGHCKHG 429
A+ L M +G+VPD+I Y +++ G K G
Sbjct: 742 LASELYTEMQAVGLVPDEIIYTVIVNGLSKKG 773
Score = 183 bits (464), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 176/319 (55%), Gaps = 11/319 (3%)
Query: 118 LEILDYGYSPSV----YVFNVLMHKLCKEGKIKDA-QMVFDEFGKRGLHATAVSFNTLIN 172
LE++++ S ++ V+ +++ LCK G+ A +++ + ++ L + +S+N++I+
Sbjct: 533 LEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIID 592
Query: 173 GHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTP 232
G K +D M G+G+ P+V TY++L+NGLCK NR+D A + EM +G+
Sbjct: 593 GFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKL 652
Query: 233 NDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLE 292
+ + LIDG CK +M+ A + E+ GLNP + Y L+ GF G++
Sbjct: 653 DIPAYGALIDGFCKRS------NMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMV 706
Query: 293 SALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVI 352
+ALD+ K+M+K G+ D +T LI G + G ++ A + EM VGL PD+ YT+++
Sbjct: 707 AALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIV 766
Query: 353 DCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVV 412
+ K G ++ +EM+ + P V YNA++ G + G L A L D MLD G++
Sbjct: 767 NGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGIL 826
Query: 413 PDDITYNILLEGHCKHGNP 431
PD T++IL+ G + P
Sbjct: 827 PDGATFDILVSGQVGNLQP 845
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/343 (31%), Positives = 180/343 (52%), Gaps = 10/343 (2%)
Query: 117 YLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCK 176
+ IL+ G P+ Y +++L+ + ++A V + + V + T+ING CK
Sbjct: 501 FSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCK 560
Query: 177 AKNLDEGFRL-KSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDV 235
+ L +++E + +Y+++I+G KE +D A EMC G++PN +
Sbjct: 561 VGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVI 620
Query: 236 IFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESAL 295
+T+L++G CKN R+D A +M+ DEM G+ D Y L+DGFCK ++ESA
Sbjct: 621 TYTSLMNGLCKNNRMDQALEMR------DEMKNKGVKLDIPAYGALIDGFCKRSNMESAS 674
Query: 296 DIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCF 355
+ E+++ G+ + +LISGF G +V A + ++MLK GL+ D TYT +ID
Sbjct: 675 ALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGL 734
Query: 356 CKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDD 415
K+G+ L EM++ G +P Y ++NGL K GQ + + M V P+
Sbjct: 735 LKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNV 794
Query: 416 ITYNILLEGHCKHGNPEDFDKLQSE---KGLVSDYACYTSLVS 455
+ YN ++ GH + GN ++ +L E KG++ D A + LVS
Sbjct: 795 LIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVS 837
Score = 119 bits (298), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 180/401 (44%), Gaps = 55/401 (13%)
Query: 100 LIDRMMRTNLPTVTLGFYLEIL-----DYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDE 154
L+ R + T+ PT + L +G+ + FN L++ K+ + A + ++
Sbjct: 129 LLIRYVSTSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQ 188
Query: 155 FGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENR 214
+ + N ++ + +L E L S M G+ D T L+ +E +
Sbjct: 189 MLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEK 248
Query: 215 LDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAG----DMKEARKIVDEMCTNG 270
+A +L ERG P+ ++++ + CK + MA +MKE + +C
Sbjct: 249 PAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKK-----LCV-- 301
Query: 271 LNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAE 330
P + TYT ++ K+G+++ A+ ++ EM+ GI ++ VA T+LI+G C+ +V A
Sbjct: 302 --PSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSAL 359
Query: 331 RMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAV---------- 380
+ +M K G P+ T++++I+ F KNG+ + K+M G P+V
Sbjct: 360 VLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGW 419
Query: 381 --------------ETY----------NALMNGLCKHGQLKNANMLLDTMLDLGVVPDDI 416
E++ N +++ LCK G+ A LL M G+ P+ +
Sbjct: 420 LKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVV 479
Query: 417 TYNILLEGHCKHGNPEDFDKLQS---EKGLVSDYACYTSLV 454
+YN ++ GHC+ N + + S EKGL + Y+ L+
Sbjct: 480 SYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILI 520
Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 139/297 (46%), Gaps = 31/297 (10%)
Query: 10 YSTMVHFLVAHKMHSQARDLLHLIVSKKGMGSSASLFASILE------------TRGTHL 57
Y T+++ L S+AR+LL ++ +K + S + SI++ +
Sbjct: 551 YQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEM 610
Query: 58 PGLVLDALMIVYVDL-------GFLDDAIQCFRLLRKHYFR--IPARGCRCLIDRM-MRT 107
G + +I Y L +D A++ ++ + IPA G LID R+
Sbjct: 611 CGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGA--LIDGFCKRS 668
Query: 108 NLPTVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSF 167
N+ + + + E+L+ G +PS ++N L+ G + A ++ + K GL ++
Sbjct: 669 NMESAS-ALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTY 727
Query: 168 NTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCE 227
TLI+G K NL L + M+ G+ PD Y+ ++NGL K+ + + EM +
Sbjct: 728 TTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKK 787
Query: 228 RGLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDG 284
+TPN +I+ +I GH + G +D EA ++ DEM G+ PD T+ IL+ G
Sbjct: 788 NNVTPNVLIYNAVIAGHYREGNLD------EAFRLHDEMLDKGILPDGATFDILVSG 838
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 189 bits (480), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 115/350 (32%), Positives = 181/350 (51%), Gaps = 13/350 (3%)
Query: 113 TLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLIN 172
L + + L+ G+ N L+H LC+ GK+ +A + E RG VS+NTLI+
Sbjct: 502 ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS 561
Query: 173 GHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTP 232
G C K LDE F M G++PD YTYS LI GL N++++A + G+ P
Sbjct: 562 GCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLP 621
Query: 233 NDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLE 292
+ ++ +IDG CK R + E ++ DEM + + P+ + Y L+ +C+ G L
Sbjct: 622 DVYTYSVMIDGCCKAERTE------EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 675
Query: 293 SALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVI 352
AL++R++M +GI ++ +T+LI G +V EA+ + EM GL+P+ YT +I
Sbjct: 676 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 735
Query: 353 DCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVV 412
D + K G LL+EM S P TY ++ G + G + A+ LL+ M + G+V
Sbjct: 736 DGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV 795
Query: 413 PDDITYNILLEGHCKHGNPEDFDKLQSEKGLVSDYACYTSLVSKSSKYRQ 462
PD ITY + G+ K G L++ KG SD Y +++ +K Q
Sbjct: 796 PDSITYKEFIYGYLKQGGV-----LEAFKG--SDEENYAAIIEGWNKLIQ 838
Score = 181 bits (458), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/334 (32%), Positives = 170/334 (50%), Gaps = 9/334 (2%)
Query: 124 GYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEG 183
G SP VY+F ++ CK GK+++A +F + + G+ V+FNT+I+G DE
Sbjct: 268 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 327
Query: 184 FRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDG 243
F K M GM P + TYS L+ GL + R+ DA +L EM ++G PN +++ LID
Sbjct: 328 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 387
Query: 244 HCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIK 303
+ AG + +A +I D M + GL+ TY L+ G+CK G ++A + KEM+
Sbjct: 388 FIE------AGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 441
Query: 304 RGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKT 363
G ++ +FT++I C A R + EML + P T +I CK+G
Sbjct: 442 IGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 501
Query: 364 GFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLE 423
L + + G + T NAL++GLC+ G+L A + +L G V D ++YN L+
Sbjct: 502 ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS 561
Query: 424 GHC-KHGNPEDFDKLQS--EKGLVSDYACYTSLV 454
G C K E F L ++GL D Y+ L+
Sbjct: 562 GCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI 595
Score = 180 bits (456), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/345 (31%), Positives = 176/345 (51%), Gaps = 9/345 (2%)
Query: 113 TLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLIN 172
L F E+L SP + L+ LCK GK A ++ +F +G + N L++
Sbjct: 467 ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLH 526
Query: 173 GHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTP 232
G C+A LDE FR++ + G G D +Y+ LI+G C + +LD+A + L EM +RGL P
Sbjct: 527 GLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKP 586
Query: 233 NDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLE 292
++ ++ LI G +++ EA + D+ NG+ PD TY++++DG CK E
Sbjct: 587 DNYTYSILICGLFNMNKVE------EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTE 640
Query: 293 SALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVI 352
+ EM+ + ++ + V + LI +CR G++ A + +M G+ P+ ATYT +I
Sbjct: 641 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 700
Query: 353 DCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVV 412
+ L +EMR +G P V Y AL++G K GQ+ LL M V
Sbjct: 701 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 760
Query: 413 PDDITYNILLEGHCKHGNPEDFDKL---QSEKGLVSDYACYTSLV 454
P+ ITY +++ G+ + GN + +L EKG+V D Y +
Sbjct: 761 PNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFI 805
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 170/335 (50%), Gaps = 10/335 (2%)
Query: 124 GYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEG 183
G PS N+L+ L + + + FD K G+ F T IN CK ++E
Sbjct: 234 GMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEEA 292
Query: 184 FRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDG 243
+L S ME +G+ P+V T++ +I+GL R D+A + +M ERG+ P + ++ L+ G
Sbjct: 293 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 352
Query: 244 HCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIK 303
+ RI GD A ++ EM G P+ I Y L+D F + G L A++I+ M+
Sbjct: 353 LTRAKRI---GD---AYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVS 406
Query: 304 RGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKT 363
+G+ L + + LI G+C+ G+ AER+L+EML +G + ++T VI C + +
Sbjct: 407 KGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDS 466
Query: 364 GFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLE 423
R + EM P L++GLCKHG+ A L L+ G V D T N LL
Sbjct: 467 ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLH 526
Query: 424 GHCKHGNPEDFDKLQSE---KGLVSDYACYTSLVS 455
G C+ G ++ ++Q E +G V D Y +L+S
Sbjct: 527 GLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS 561
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 189 bits (479), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 189/387 (48%), Gaps = 32/387 (8%)
Query: 100 LIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRG 159
LID +++ G E++ +G + Y+++ + + KEG ++ A+ +FD G
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASG 377
Query: 160 LHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAE 219
L A ++ +LI G+C+ KN+ +G+ L M+ + YTY ++ G+C LD A
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAY 437
Query: 220 LLLHEMCERGLTPNDVIFTTLIDGHCKNGR-----------------------------I 250
++ EM G PN VI+TTLI +N R +
Sbjct: 438 NIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGL 497
Query: 251 DMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDN 310
A M EAR + EM NGL P+ TY + G+ + + SA KEM + G+ +
Sbjct: 498 SKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNK 557
Query: 311 VAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKE 370
V T LI+ +C+ GKV+EA R M+ G+ D TYT++++ KN + +E
Sbjct: 558 VLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFRE 617
Query: 371 MRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGN 430
MR G P V +Y L+NG K G ++ A+ + D M++ G+ P+ I YN+LL G C+ G
Sbjct: 618 MRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGE 677
Query: 431 PEDFDKLQSE---KGLVSDYACYTSLV 454
E +L E KGL + Y +++
Sbjct: 678 IEKAKELLDEMSVKGLHPNAVTYCTII 704
Score = 186 bits (472), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 127/450 (28%), Positives = 209/450 (46%), Gaps = 26/450 (5%)
Query: 8 HAYSTMVHFLVAHKMHSQARDLLHLIVSKKGMGSSASLFASILETRGTHLPGLVLDALMI 67
H YS ++ L+ + A+ L+H +VS G ++ + D +
Sbjct: 313 HTYSLLIDGLLKGRNADAAKGLVHEMVS-----------------HGINIKPYMYDCCIC 355
Query: 68 VYVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYLEILDYGYSP 127
V G ++ A F + A+ LI+ R +E+
Sbjct: 356 VMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVI 415
Query: 128 SVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLK 187
S Y + ++ +C G + A + E G V + TLI + + R+
Sbjct: 416 SPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVL 475
Query: 188 SVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKN 247
M+ G+ PD++ Y++LI GL K R+D+A L EM E GL PN + I G+ +
Sbjct: 476 KEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIE- 534
Query: 248 GRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIE 307
A + A K V EM G+ P+K+ T L++ +CK+G + A + M+ +GI
Sbjct: 535 -----ASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL 589
Query: 308 LDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRL 367
D +T L++G + KV +AE + REM G+ PD +Y ++I+ F K G+ + +
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI 649
Query: 368 LKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCK 427
EM +G P V YN L+ G C+ G+++ A LLD M G+ P+ +TY +++G+CK
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709
Query: 428 HGNPEDFDKLQSE---KGLVSDYACYTSLV 454
G+ + +L E KGLV D YT+LV
Sbjct: 710 SGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739
Score = 184 bits (466), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 194/412 (47%), Gaps = 72/412 (17%)
Query: 119 EILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAK 178
E++ G P+V ++ L+ + + DA V E ++G+ +N+LI G KAK
Sbjct: 442 EMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAK 501
Query: 179 NLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFT 238
+DE M +G++P+ +TY A I+G + + A+ + EM E G+ PN V+ T
Sbjct: 502 RMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCT 561
Query: 239 TLIDGHCKNGRIDMA-------------GDMK----------------EARKIVDEMCTN 269
LI+ +CK G++ A GD K +A +I EM
Sbjct: 562 GLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGK 621
Query: 270 GLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEA 329
G+ PD +Y +L++GF K G+++ A I EM++ G+ + + + L+ GFCR G++ +A
Sbjct: 622 GIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKA 681
Query: 330 ERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNG 389
+ +L EM GL P+ TY +ID +CK+GD FRL EM+ G +P Y L++G
Sbjct: 682 KELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDG 741
Query: 390 LCKHGQLKNA--------------------------------------NMLLDTMLDLGV 411
C+ ++ A N L+D D
Sbjct: 742 CCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG 801
Query: 412 VPDDITYNILLEGHCKHGNPED----FDKLQSEKGLVSDYACYTSLVSKSSK 459
P+D+TYNI+++ CK GN E F ++Q+ L+ YTSL++ K
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQN-ANLMPTVITYTSLLNGYDK 852
Score = 170 bits (430), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 192/361 (53%), Gaps = 8/361 (2%)
Query: 75 LDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNV 134
+DDA + FR +R LI+ + + E+++ G +P+V ++N+
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 135 LMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSG 194
L+ C+ G+I+ A+ + DE +GLH AV++ T+I+G+CK+ +L E FRL M+ G
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727
Query: 195 MRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMAG 254
+ PD + Y+ L++G C+ N ++ A + + ++G + F LI+ K G+ ++
Sbjct: 728 LVPDSFVYTTLVDGCCRLNDVERA-ITIFGTNKKGCASSTAPFNALINWVFKFGKTELKT 786
Query: 255 DMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFT 314
++ +++D P+ +TY I++D CKEG+LE+A ++ +M + + +T
Sbjct: 787 EV--LNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYT 844
Query: 315 ALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRS- 373
+L++G+ + G+ E + E + G++PD Y+++I+ F K G T L+ +M +
Sbjct: 845 SLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAK 904
Query: 374 ----DGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHG 429
DG ++ T AL++G K G+++ A +++ M+ L +PD T L+ C
Sbjct: 905 NAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISS 964
Query: 430 N 430
N
Sbjct: 965 N 965
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 173/368 (47%), Gaps = 32/368 (8%)
Query: 124 GYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEG 183
G P Y ++VL+ LCK +++DA+ + E G+ +++ LI+G K +N D
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 184 FRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIFTTLIDG 243
L M G+ Y Y I + KE ++ A+ L M GL P + +LI+G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 244 HC--KNGR------IDM---------------------AGDMKEARKIVDEMCTNGLNPD 274
+C KN R ++M +GD+ A IV EM +G P+
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 275 KITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLR 334
+ YT L+ F + A+ + KEM ++GI D + +LI G + ++ EA L
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511
Query: 335 EMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHG 394
EM++ GLKP+ TY I + + + + + +KEMR G LP L+N CK G
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKG 571
Query: 395 QLKNANMLLDTMLDLGVVPDDITYNILLEGHCKHGNPEDFDKLQSE---KGLVSDYACYT 451
++ A +M+D G++ D TY +L+ G K+ +D +++ E KG+ D Y
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYG 631
Query: 452 SLVSKSSK 459
L++ SK
Sbjct: 632 VLINGFSK 639
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 171/392 (43%), Gaps = 37/392 (9%)
Query: 100 LIDRMMRTNLPTVTLGFYLEILD-----YGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDE 154
+++RM+ N P + + I+ G S +F +L +G I++A VF
Sbjct: 119 VVERMIERNWPVAEV--WSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSS 176
Query: 155 FGKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLC---- 210
L L++ + LD + + M + DV TY LI C
Sbjct: 177 SMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGN 236
Query: 211 ------------KENR-----LDDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMA 253
KE R +D A L M +GL P + LIDG CK R++
Sbjct: 237 VQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLE-- 294
Query: 254 GDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMIKRGIELDNVAF 313
+A+ ++ EM + G++ D TY++L+DG K + ++A + EM+ GI + +
Sbjct: 295 ----DAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMY 350
Query: 314 TALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRS 373
I + G + +A+ + M+ GL P Y +I+ +C+ + + G+ LL EM+
Sbjct: 351 DCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKK 410
Query: 374 DGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDITYNILLE---GHCKHGN 430
+ + TY ++ G+C G L A ++ M+ G P+ + Y L++ + + G+
Sbjct: 411 RNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGD 470
Query: 431 PEDFDKLQSEKGLVSDYACYTSLVSKSSKYRQ 462
K E+G+ D CY SL+ SK ++
Sbjct: 471 AMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKR 502
>sp|Q9SAJ5|PP133_ARATH Pentatricopeptide repeat-containing protein At1g79540
OS=Arabidopsis thaliana GN=At1g79540 PE=2 SV=1
Length = 780
Score = 189 bits (479), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 130/449 (28%), Positives = 211/449 (46%), Gaps = 49/449 (10%)
Query: 50 LETRGTHLPGLVLDALMIVYVDLGFLDDAIQCFRLLRKHYFRIPARGCRCLIDRMMRTNL 109
L++ G + L+ Y +G + A++ F +++ R ++ MMR +
Sbjct: 118 LKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEV 177
Query: 110 P-TVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFN 168
+ Y E+L SP++Y F +LM L K+G+ DAQ +FD+ RG+ V++
Sbjct: 178 FFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYT 237
Query: 169 TLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCER 228
LI+G C+ + D+ +L M+ SG PD ++AL++G CK R+ +A LL +
Sbjct: 238 ILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKD 297
Query: 229 GLTPNDVIFTTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKE 288
G +++LIDG + R +A ++ M + PD I YTIL+ G K
Sbjct: 298 GFVLGLRGYSSLIDGLFRARR------YTQAFELYANMLKKNIKPDIILYTILIQGLSKA 351
Query: 289 GDLESALDIRKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATY 348
G +E AL + M +GI D + A+I C G + E + EM + PD T+
Sbjct: 352 GKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTH 411
Query: 349 TMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLL----- 403
T++I C+NG + + E+ G P+V T+NAL++GLCK G+LK A +LL
Sbjct: 412 TILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEV 471
Query: 404 ------------------DTML----------------DLGVVPDDITYNILLEGHCKHG 429
DTM+ D G PD ++YN+L+ G C+ G
Sbjct: 472 GRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAG 531
Query: 430 NPEDFDKLQSE---KGLVSDYACYTSLVS 455
+ + KL + KGL D Y +L++
Sbjct: 532 DIDGALKLLNVLQLKGLSPDSVTYNTLIN 560
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 167/353 (47%), Gaps = 13/353 (3%)
Query: 119 EILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAK 178
E+ G S Y F VL+ K G + A F + ++N ++ + +
Sbjct: 117 ELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREE 176
Query: 179 NLDE-GFRLKSVMEGSGMRPDVYTYSALINGLCKENRLDDAELLLHEMCERGLTPNDVIF 237
F + + M P++YT+ L++GL K+ R DA+ + +M RG++PN V +
Sbjct: 177 VFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTY 236
Query: 238 TTLIDGHCKNGRIDMAGDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDI 297
T LI G C+ G D +ARK+ EM T+G PD + + LLDGFCK G + A ++
Sbjct: 237 TILISGLCQRGSAD------DARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFEL 290
Query: 298 RKEMIKRGIELDNVAFTALISGFCRGGKVVEAERMLREMLKVGLKPDDATYTMVIDCFCK 357
+ K G L +++LI G R + +A + MLK +KPD YT++I K
Sbjct: 291 LRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSK 350
Query: 358 NGDTKTGFRLLKEMRSDGHLPAVETYNALMNGLCKHGQLKNANMLLDTMLDLGVVPDDIT 417
G + +LL M S G P YNA++ LC G L+ L M + PD T
Sbjct: 351 AGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACT 410
Query: 418 YNILLEGHCKHGNPEDFDKLQSE---KGLVSDYACYTSLVS---KSSKYRQKR 464
+ IL+ C++G + +++ +E G A + +L+ KS + ++ R
Sbjct: 411 HTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEAR 463
Score = 142 bits (359), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/459 (23%), Positives = 190/459 (41%), Gaps = 67/459 (14%)
Query: 36 KKGMGSSASLFASILETRGTHLPGLVLDALMIVYVDLGFLDDAIQCFRLLRKHYFRIPAR 95
++G A ++T G + + +AL+ + LG + +A + RL K F + R
Sbjct: 245 QRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLR 304
Query: 96 GCRCLIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNVLMHKLCKEGKIKDAQMVFDEF 155
G LID + R T Y +L P + ++ +L+ L K GKI+DA +
Sbjct: 305 GYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSM 364
Query: 156 GKRGLHATAVSFNTLINGHCKAKNLDEGFRLKSVMEGSGMRPDVYTYSALINGLCKENRL 215
+G+ +N +I C L+EG L+ M + PD T++ LI +C+ +
Sbjct: 365 PSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLV 424
Query: 216 DDAELLLHEMCERGLTPNDVIFTTLIDGHCKNGRIDMA---------------------- 253
+AE + E+ + G +P+ F LIDG CK+G + A
Sbjct: 425 REAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHS 484
Query: 254 -----------GDMKEARKIVDEMCTNGLNPDKITYTILLDGFCKEGDLESALDIRKEMI 302
G + +A + + G +PD ++Y +L++GFC+ GD++ AL + +
Sbjct: 485 GNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQ 544
Query: 303 KRGIELDNVAFTALISGF---------------------------------CRGGKVVEA 329
+G+ D+V + LI+G CR KV+ A
Sbjct: 545 LKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAVYRSLMTWSCRKRKVLVA 604
Query: 330 ERMLREMLKVGLKPDDATYTMVIDCFCKNGDTKTGFRLLKEMRSDGHLPAVETYNALMNG 389
+ + LK DD T + CF K G+T+ R L E+ + + Y + G
Sbjct: 605 FNLWMKYLKKISCLDDETANEIEQCF-KEGETERALRRLIELDTRKDELTLGPYTIWLIG 663
Query: 390 LCKHGQLKNANMLLDTMLDLGVVPDDITYNILLEGHCKH 428
LC+ G+ A M+ + + ++ + L+ G CK
Sbjct: 664 LCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKR 702
Score = 33.9 bits (76), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 132 FNVLMHKLCKEGKIKDAQMVFDEFGKRGLHATAVSFNTLINGHCKAKNLDEGFRL 186
+ + + LC+ G+ +A MVF ++ + T S LI+G CK + LD +
Sbjct: 657 YTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEV 711
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.140 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 175,841,822
Number of Sequences: 539616
Number of extensions: 7650765
Number of successful extensions: 27397
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 415
Number of HSP's successfully gapped in prelim test: 80
Number of HSP's that attempted gapping in prelim test: 16980
Number of HSP's gapped (non-prelim): 2829
length of query: 464
length of database: 191,569,459
effective HSP length: 121
effective length of query: 343
effective length of database: 126,275,923
effective search space: 43312641589
effective search space used: 43312641589
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.9 bits)