Query 047874
Match_columns 941
No_of_seqs 356 out of 2862
Neff 9.0
Searched_HMMs 46136
Date Fri Mar 29 04:04:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047874.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/047874hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0204 Calcium transporting A 100.0 7E-165 2E-169 1362.5 61.0 923 2-935 85-1020(1034)
2 KOG0202 Ca2+ transporting ATPa 100.0 1E-150 3E-155 1251.7 64.0 875 18-923 7-968 (972)
3 TIGR01517 ATPase-IIB_Ca plasma 100.0 8E-139 2E-143 1286.5 97.7 899 3-922 26-940 (941)
4 TIGR01523 ATPase-IID_K-Na pota 100.0 2E-135 4E-140 1252.8 96.4 865 17-922 9-1046(1053)
5 TIGR01522 ATPase-IIA2_Ca golgi 100.0 5E-131 1E-135 1209.7 97.6 841 18-922 7-881 (884)
6 TIGR01106 ATPase-IIC_X-K sodiu 100.0 5E-131 1E-135 1219.4 95.2 877 16-923 18-985 (997)
7 COG0474 MgtA Cation transport 100.0 3E-130 7E-135 1196.4 85.4 855 18-919 26-912 (917)
8 PRK15122 magnesium-transportin 100.0 4E-126 1E-130 1158.1 93.3 828 18-921 30-895 (903)
9 PRK10517 magnesium-transportin 100.0 2E-125 4E-130 1150.6 90.3 824 11-922 43-896 (902)
10 TIGR01524 ATPase-IIIB_Mg magne 100.0 8E-125 2E-129 1146.8 92.9 827 7-922 5-861 (867)
11 TIGR01116 ATPase-IIA1_Ca sarco 100.0 1E-124 2E-129 1156.3 92.2 834 66-922 1-917 (917)
12 KOG0203 Na+/K+ ATPase, alpha s 100.0 6E-120 1E-124 1003.1 35.9 876 16-922 40-1006(1019)
13 TIGR01647 ATPase-IIIA_H plasma 100.0 7E-114 2E-118 1038.0 85.1 744 34-882 1-752 (755)
14 TIGR01657 P-ATPase-V P-type AT 100.0 1E-114 3E-119 1080.0 80.0 802 32-901 137-1048(1054)
15 TIGR01652 ATPase-Plipid phosph 100.0 9E-105 2E-109 995.3 75.8 839 49-927 1-1050(1057)
16 PLN03190 aminophospholipid tra 100.0 6E-100 1E-104 939.3 82.8 850 48-933 86-1152(1178)
17 KOG0208 Cation transport ATPas 100.0 4.7E-94 1E-98 809.0 57.8 802 32-900 158-1098(1140)
18 KOG0210 P-type ATPase [Inorgan 100.0 1E-89 2.3E-94 742.7 41.8 815 44-927 74-1044(1051)
19 PRK14010 potassium-transportin 100.0 1.1E-86 2.3E-91 773.3 62.0 550 68-745 28-588 (673)
20 KOG0206 P-type ATPase [General 100.0 1.4E-89 3E-94 814.7 34.4 856 45-935 28-1089(1151)
21 PRK01122 potassium-transportin 100.0 1.2E-84 2.6E-89 756.8 64.9 542 67-731 28-578 (679)
22 KOG0205 Plasma membrane H+-tra 100.0 1.5E-85 3.4E-90 707.2 33.7 664 16-765 19-688 (942)
23 TIGR01497 kdpB K+-transporting 100.0 5.1E-81 1.1E-85 724.4 64.3 546 67-735 27-583 (675)
24 KOG0209 P-type ATPase [Inorgan 100.0 3E-80 6.4E-85 681.5 52.0 832 21-926 151-1153(1160)
25 COG2217 ZntA Cation transport 100.0 1.6E-77 3.5E-82 696.0 59.7 485 122-743 197-682 (713)
26 PRK11033 zntA zinc/cadmium/mer 100.0 7.6E-74 1.6E-78 688.1 62.6 503 99-742 206-710 (741)
27 TIGR01494 ATPase_P-type ATPase 100.0 1.1E-72 2.5E-77 658.1 56.9 477 109-743 6-484 (499)
28 KOG0207 Cation transport ATPas 100.0 1.2E-72 2.7E-77 637.3 43.1 563 98-778 339-906 (951)
29 TIGR01525 ATPase-IB_hvy heavy 100.0 5.4E-71 1.2E-75 649.4 55.9 525 78-744 5-531 (556)
30 TIGR01512 ATPase-IB2_Cd heavy 100.0 1.5E-70 3.2E-75 641.1 57.0 505 77-743 4-509 (536)
31 TIGR01511 ATPase-IB1_Cu copper 100.0 6.7E-70 1.5E-74 637.3 58.8 500 98-747 52-553 (562)
32 PRK10671 copA copper exporting 100.0 3.9E-69 8.4E-74 661.5 61.4 510 98-742 284-794 (834)
33 COG2216 KdpB High-affinity K+ 100.0 3.1E-57 6.8E-62 478.6 37.4 499 111-730 78-579 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 2E-33 4.3E-38 295.4 22.9 224 105-352 2-230 (230)
35 KOG4383 Uncharacterized conser 100.0 7E-27 1.5E-31 253.5 34.2 450 485-939 698-1347(1354)
36 PF00689 Cation_ATPase_C: Cati 99.9 1.3E-22 2.9E-27 204.9 16.5 171 749-920 1-182 (182)
37 PF00702 Hydrolase: haloacid d 99.9 3.3E-22 7.2E-27 208.2 11.1 97 552-679 115-215 (215)
38 COG4087 Soluble P-type ATPase 99.6 2.4E-14 5.1E-19 126.2 10.9 125 554-712 20-146 (152)
39 PF13246 Hydrolase_like2: Puta 99.4 2.3E-13 4.9E-18 119.0 7.7 87 407-496 2-90 (91)
40 PF00690 Cation_ATPase_N: Cati 99.3 1.7E-12 3.6E-17 107.5 6.9 68 16-85 2-69 (69)
41 PRK10513 sugar phosphate phosp 99.3 7.7E-12 1.7E-16 135.0 12.7 68 646-714 195-266 (270)
42 PRK15126 thiamin pyrimidine py 99.3 1.9E-11 4.1E-16 132.0 11.5 150 563-713 18-259 (272)
43 COG0561 Cof Predicted hydrolas 99.3 2E-11 4.3E-16 131.2 11.2 156 558-714 13-259 (264)
44 PRK10976 putative hydrolase; P 99.3 4.1E-11 8.9E-16 129.0 13.6 67 647-714 190-262 (266)
45 PRK01158 phosphoglycolate phos 99.2 3.8E-11 8.2E-16 126.3 12.2 148 565-714 21-227 (230)
46 TIGR01487 SPP-like sucrose-pho 99.2 5.2E-11 1.1E-15 123.7 11.1 147 564-712 18-215 (215)
47 PLN02887 hydrolase family prot 99.2 8.5E-11 1.9E-15 136.5 12.1 67 647-714 507-577 (580)
48 TIGR01482 SPP-subfamily Sucros 99.2 2E-10 4.3E-15 120.4 12.0 148 564-713 15-222 (225)
49 PF08282 Hydrolase_3: haloacid 99.1 3.7E-10 8E-15 120.4 13.4 150 562-712 13-254 (254)
50 smart00831 Cation_ATPase_N Cat 99.1 9.9E-11 2.1E-15 95.5 6.4 62 26-89 2-63 (64)
51 PRK10530 pyridoxal phosphate ( 99.1 3.2E-10 7E-15 122.6 12.1 67 647-714 199-269 (272)
52 PRK11133 serB phosphoserine ph 99.1 6.2E-10 1.4E-14 121.1 11.6 131 564-713 181-316 (322)
53 TIGR02137 HSK-PSP phosphoserin 99.1 8.9E-10 1.9E-14 112.2 11.6 129 564-715 68-198 (203)
54 PRK03669 mannosyl-3-phosphogly 99.0 2.9E-09 6.4E-14 114.6 14.5 68 646-714 186-266 (271)
55 TIGR01486 HAD-SF-IIB-MPGP mann 99.0 3.4E-09 7.4E-14 113.2 13.9 67 647-714 176-254 (256)
56 TIGR02726 phenyl_P_delta pheny 99.0 1.7E-09 3.8E-14 106.0 10.4 104 571-708 41-146 (169)
57 TIGR00099 Cof-subfamily Cof su 98.9 3.2E-09 6.9E-14 113.6 10.4 66 646-712 187-256 (256)
58 TIGR01670 YrbI-phosphatas 3-de 98.9 6.1E-09 1.3E-13 101.6 11.0 105 572-712 36-145 (154)
59 COG0560 SerB Phosphoserine pho 98.8 9.6E-09 2.1E-13 105.1 9.5 120 563-701 76-200 (212)
60 COG1778 Low specificity phosph 98.8 1.8E-08 3.9E-13 92.9 8.2 116 571-722 42-165 (170)
61 TIGR00338 serB phosphoserine p 98.8 2.4E-08 5.2E-13 104.1 10.1 128 564-711 85-218 (219)
62 PRK00192 mannosyl-3-phosphogly 98.8 5.2E-08 1.1E-12 105.1 12.1 67 647-714 190-268 (273)
63 PRK09484 3-deoxy-D-manno-octul 98.7 4.9E-08 1.1E-12 98.2 9.8 98 571-704 55-156 (183)
64 TIGR02471 sucr_syn_bact_C sucr 98.6 1.5E-07 3.2E-12 99.3 10.9 67 647-714 159-233 (236)
65 PRK13582 thrH phosphoserine ph 98.5 5.4E-07 1.2E-11 92.9 11.5 127 564-714 68-197 (205)
66 TIGR01485 SPP_plant-cyano sucr 98.5 6.1E-07 1.3E-11 95.4 11.7 152 562-714 19-245 (249)
67 PRK08238 hypothetical protein; 98.5 4.6E-05 1E-09 87.6 27.5 98 564-690 72-169 (479)
68 KOG1615 Phosphoserine phosphat 98.5 1.5E-07 3.2E-12 89.9 5.9 111 564-686 88-200 (227)
69 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.4 1.2E-06 2.6E-11 89.9 10.3 117 564-697 80-200 (201)
70 PLN02382 probable sucrose-phos 98.4 2.7E-06 5.8E-11 96.4 12.6 149 565-714 29-258 (413)
71 TIGR02463 MPGP_rel mannosyl-3- 98.3 5.1E-06 1.1E-10 86.7 12.0 39 566-604 18-56 (221)
72 TIGR03333 salvage_mtnX 2-hydro 98.2 7E-06 1.5E-10 85.1 11.3 136 563-713 69-209 (214)
73 TIGR02461 osmo_MPG_phos mannos 98.2 5.6E-06 1.2E-10 86.2 10.5 44 562-605 13-56 (225)
74 PLN02954 phosphoserine phospha 98.2 1.3E-05 2.7E-10 83.9 12.2 129 564-710 84-221 (224)
75 PF12710 HAD: haloacid dehalog 98.1 4.8E-06 1E-10 84.7 7.0 92 567-676 92-192 (192)
76 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.0 1.7E-05 3.7E-10 81.4 9.6 107 562-685 85-197 (202)
77 PRK09552 mtnX 2-hydroxy-3-keto 98.0 2E-05 4.4E-10 82.0 10.0 110 564-684 74-185 (219)
78 TIGR01488 HAD-SF-IB Haloacid D 98.0 1E-05 2.2E-10 81.1 7.6 98 565-678 74-177 (177)
79 PRK10187 trehalose-6-phosphate 98.0 2.8E-05 6.1E-10 83.1 10.9 142 564-713 36-241 (266)
80 PTZ00174 phosphomannomutase; P 98.0 2.8E-05 6.1E-10 82.4 10.0 54 646-700 187-245 (247)
81 COG0546 Gph Predicted phosphat 98.0 4.5E-05 9.7E-10 79.4 11.0 127 562-712 87-217 (220)
82 PRK13222 phosphoglycolate phos 98.0 5.1E-05 1.1E-09 79.4 11.4 129 563-715 92-224 (226)
83 PRK12702 mannosyl-3-phosphogly 98.0 3.4E-05 7.4E-10 80.9 9.6 43 563-605 17-59 (302)
84 TIGR01489 DKMTPPase-SF 2,3-dik 97.9 2.7E-05 5.8E-10 78.9 8.6 114 563-683 71-186 (188)
85 cd01427 HAD_like Haloacid deha 97.9 3.7E-05 8E-10 72.9 7.8 118 560-683 20-138 (139)
86 PRK14502 bifunctional mannosyl 97.9 8.9E-05 1.9E-09 86.5 11.7 40 565-604 434-473 (694)
87 TIGR01454 AHBA_synth_RP 3-amin 97.8 7.8E-05 1.7E-09 76.7 10.1 125 564-712 75-203 (205)
88 PF05116 S6PP: Sucrose-6F-phos 97.6 0.00013 2.8E-09 77.1 8.2 68 646-714 164-244 (247)
89 TIGR01484 HAD-SF-IIB HAD-super 97.5 0.00028 6.1E-09 72.5 8.6 39 564-602 17-55 (204)
90 PRK13288 pyrophosphatase PpaX; 97.5 0.00049 1.1E-08 71.3 10.4 124 565-712 83-210 (214)
91 TIGR01544 HAD-SF-IE haloacid d 97.5 0.00068 1.5E-08 71.5 11.2 132 563-712 120-273 (277)
92 TIGR01449 PGP_bact 2-phosphogl 97.5 0.00037 8E-09 72.1 9.2 122 564-709 85-210 (213)
93 PRK13223 phosphoglycolate phos 97.5 0.00053 1.2E-08 73.7 10.6 126 563-712 100-229 (272)
94 PRK14501 putative bifunctional 97.5 0.00074 1.6E-08 83.1 12.4 61 646-713 656-721 (726)
95 PRK10826 2-deoxyglucose-6-phos 97.3 0.00075 1.6E-08 70.4 9.2 122 564-709 92-216 (222)
96 PRK11590 hypothetical protein; 97.3 0.0019 4.1E-08 66.7 11.7 106 564-685 95-202 (211)
97 TIGR01545 YfhB_g-proteo haloac 97.3 0.00097 2.1E-08 68.6 9.4 106 564-685 94-201 (210)
98 COG4030 Uncharacterized protei 97.3 0.00092 2E-08 65.8 8.4 147 564-713 83-262 (315)
99 PRK13225 phosphoglycolate phos 97.3 0.0022 4.8E-08 68.8 12.0 122 564-712 142-267 (273)
100 PLN02770 haloacid dehalogenase 97.3 0.0016 3.4E-08 69.2 10.6 119 564-704 108-229 (248)
101 PLN03243 haloacid dehalogenase 97.2 0.0019 4E-08 68.8 10.7 122 564-709 109-231 (260)
102 PRK13226 phosphoglycolate phos 97.2 0.0019 4.2E-08 67.6 10.6 124 564-711 95-223 (229)
103 smart00775 LNS2 LNS2 domain. T 97.2 0.002 4.2E-08 62.9 9.6 103 562-681 25-141 (157)
104 TIGR01422 phosphonatase phosph 97.2 0.0025 5.3E-08 68.0 10.7 100 564-684 99-200 (253)
105 TIGR03351 PhnX-like phosphonat 97.1 0.0028 6E-08 66.0 10.0 123 563-710 86-217 (220)
106 PRK11009 aphA acid phosphatase 97.0 0.0017 3.7E-08 67.5 7.6 92 564-684 114-210 (237)
107 PRK11587 putative phosphatase; 97.0 0.0038 8.3E-08 64.8 10.4 114 564-701 83-198 (218)
108 TIGR01672 AphA HAD superfamily 97.0 0.0015 3.2E-08 68.0 7.0 88 565-681 115-206 (237)
109 TIGR01548 HAD-SF-IA-hyp1 haloa 96.9 0.0025 5.4E-08 65.0 8.1 94 562-678 104-197 (197)
110 PRK13478 phosphonoacetaldehyde 96.9 0.0048 1E-07 66.3 10.6 96 564-680 101-197 (267)
111 PLN02575 haloacid dehalogenase 96.8 0.0066 1.4E-07 67.3 10.2 120 564-708 216-337 (381)
112 PLN02580 trehalose-phosphatase 96.7 0.012 2.7E-07 65.1 12.0 63 646-713 300-374 (384)
113 PRK08942 D,D-heptose 1,7-bisph 96.6 0.013 2.8E-07 58.8 10.5 127 565-713 30-177 (181)
114 COG4359 Uncharacterized conser 96.6 0.0044 9.6E-08 59.3 5.9 105 564-684 73-184 (220)
115 TIGR01662 HAD-SF-IIIA HAD-supe 96.6 0.011 2.4E-07 55.8 8.8 92 564-681 25-126 (132)
116 PRK06698 bifunctional 5'-methy 96.5 0.013 2.8E-07 68.3 10.9 124 564-714 330-455 (459)
117 TIGR01428 HAD_type_II 2-haloal 96.5 0.01 2.2E-07 60.6 8.5 96 564-681 92-187 (198)
118 PHA02530 pseT polynucleotide k 96.4 0.0072 1.6E-07 66.2 7.8 109 560-682 183-292 (300)
119 PRK14988 GMP/IMP nucleotidase; 96.4 0.0084 1.8E-07 62.5 7.9 100 564-685 93-194 (224)
120 TIGR01685 MDP-1 magnesium-depe 96.4 0.018 3.9E-07 56.9 9.2 112 554-684 35-155 (174)
121 PLN02205 alpha,alpha-trehalose 96.4 0.016 3.6E-07 71.5 10.9 38 563-600 615-653 (854)
122 TIGR02253 CTE7 HAD superfamily 96.3 0.0099 2.1E-07 61.8 7.7 100 564-685 94-195 (221)
123 PRK06769 hypothetical protein; 96.3 0.015 3.2E-07 57.9 8.2 100 565-685 29-137 (173)
124 COG3769 Predicted hydrolase (H 96.2 0.041 8.9E-07 54.5 10.6 38 568-605 27-64 (274)
125 TIGR01990 bPGM beta-phosphoglu 96.2 0.0088 1.9E-07 60.2 6.3 94 564-681 87-180 (185)
126 TIGR01509 HAD-SF-IA-v3 haloaci 96.2 0.016 3.6E-07 58.0 8.0 94 564-680 85-178 (183)
127 PRK09449 dUMP phosphatase; Pro 96.1 0.024 5.3E-07 59.0 9.2 124 564-712 95-222 (224)
128 TIGR02009 PGMB-YQAB-SF beta-ph 96.0 0.013 2.9E-07 58.9 6.2 94 564-681 88-181 (185)
129 PLN02779 haloacid dehalogenase 95.9 0.033 7.1E-07 60.4 9.3 118 564-701 144-263 (286)
130 PF13419 HAD_2: Haloacid dehal 95.9 0.011 2.4E-07 58.5 5.1 96 564-681 77-172 (176)
131 TIGR00213 GmhB_yaeD D,D-heptos 95.9 0.035 7.7E-07 55.4 8.7 122 565-701 27-169 (176)
132 PLN02940 riboflavin kinase 95.8 0.029 6.2E-07 63.4 8.8 115 564-701 93-211 (382)
133 TIGR01533 lipo_e_P4 5'-nucleot 95.8 0.046 9.9E-07 57.9 9.4 87 562-676 116-205 (266)
134 TIGR01656 Histidinol-ppas hist 95.8 0.026 5.7E-07 54.5 7.1 99 564-682 27-141 (147)
135 TIGR02254 YjjG/YfnB HAD superf 95.7 0.029 6.3E-07 58.4 7.9 121 564-709 97-221 (224)
136 TIGR01675 plant-AP plant acid 95.7 0.047 1E-06 56.1 8.9 86 563-672 119-209 (229)
137 TIGR01668 YqeG_hyp_ppase HAD s 95.7 0.033 7.1E-07 55.3 7.5 90 564-684 43-135 (170)
138 PLN02423 phosphomannomutase 95.7 0.065 1.4E-06 56.6 10.2 39 646-685 188-231 (245)
139 TIGR01261 hisB_Nterm histidino 95.6 0.026 5.6E-07 55.3 6.3 96 564-682 29-143 (161)
140 PF06888 Put_Phosphatase: Puta 95.6 0.016 3.5E-07 59.9 5.0 106 564-676 71-187 (234)
141 TIGR01458 HAD-SF-IIA-hyp3 HAD- 95.4 0.15 3.3E-06 54.3 12.0 49 557-605 10-65 (257)
142 PLN03017 trehalose-phosphatase 95.3 0.2 4.3E-06 55.2 12.7 46 552-598 119-166 (366)
143 COG2179 Predicted hydrolase of 95.3 0.051 1.1E-06 51.8 6.9 110 519-680 20-132 (175)
144 TIGR02252 DREG-2 REG-2-like, H 95.2 0.05 1.1E-06 55.7 7.2 95 564-681 105-200 (203)
145 TIGR01549 HAD-SF-IA-v1 haloaci 95.2 0.051 1.1E-06 52.8 6.9 90 565-679 65-154 (154)
146 TIGR01459 HAD-SF-IIA-hyp4 HAD- 95.1 0.19 4.1E-06 53.1 11.5 94 557-679 17-115 (242)
147 TIGR01691 enolase-ppase 2,3-di 94.9 0.078 1.7E-06 54.7 7.5 98 562-683 93-193 (220)
148 smart00577 CPDc catalytic doma 94.8 0.025 5.5E-07 54.6 3.6 95 564-683 45-139 (148)
149 TIGR01681 HAD-SF-IIIC HAD-supe 94.8 0.077 1.7E-06 49.8 6.6 39 564-602 29-68 (128)
150 TIGR00685 T6PP trehalose-phosp 94.5 0.059 1.3E-06 57.0 5.7 68 640-712 160-239 (244)
151 PRK05446 imidazole glycerol-ph 94.3 0.13 2.8E-06 56.8 8.1 98 564-681 30-143 (354)
152 PLN02811 hydrolase 94.2 0.11 2.4E-06 54.0 7.1 96 564-681 78-179 (220)
153 TIGR01664 DNA-3'-Pase DNA 3'-p 94.2 0.15 3.2E-06 50.3 7.3 93 566-682 44-158 (166)
154 PLN02919 haloacid dehalogenase 94.0 0.22 4.7E-06 63.8 10.3 132 565-717 162-296 (1057)
155 PF13344 Hydrolase_6: Haloacid 94.0 0.11 2.5E-06 46.3 5.6 49 557-605 7-58 (101)
156 PF08235 LNS2: LNS2 (Lipin/Ned 93.9 0.31 6.8E-06 46.8 8.7 102 563-681 26-141 (157)
157 PRK10444 UMP phosphatase; Prov 93.6 0.4 8.6E-06 50.7 9.9 48 557-604 10-60 (248)
158 TIGR01457 HAD-SF-IIA-hyp2 HAD- 93.2 0.6 1.3E-05 49.5 10.4 50 557-606 10-62 (249)
159 TIGR02247 HAD-1A3-hyp Epoxide 92.9 0.13 2.8E-06 53.0 4.8 100 564-685 94-196 (211)
160 PF09419 PGP_phosphatase: Mito 92.9 0.29 6.4E-06 47.8 6.8 86 562-679 57-157 (168)
161 PRK10563 6-phosphogluconate ph 92.6 0.16 3.5E-06 52.7 5.1 96 564-683 88-183 (221)
162 KOG3040 Predicted sugar phosph 92.5 0.8 1.7E-05 45.3 9.1 52 554-605 13-67 (262)
163 PLN02645 phosphoglycolate phos 92.4 0.38 8.2E-06 52.8 8.0 49 557-605 37-88 (311)
164 TIGR01686 FkbH FkbH-like domai 92.1 0.36 7.8E-06 53.2 7.3 95 564-685 31-129 (320)
165 PRK09456 ?-D-glucose-1-phospha 91.6 0.32 6.9E-06 49.6 5.8 97 564-682 84-181 (199)
166 KOG3120 Predicted haloacid deh 91.5 0.2 4.3E-06 49.9 3.8 108 564-685 84-209 (256)
167 PLN02151 trehalose-phosphatase 91.2 2.1 4.5E-05 47.2 11.7 62 647-713 269-342 (354)
168 PF03767 Acid_phosphat_B: HAD 91.1 0.24 5.3E-06 51.5 4.4 88 564-674 115-207 (229)
169 PHA02597 30.2 hypothetical pro 90.3 0.7 1.5E-05 46.9 6.8 95 564-684 74-173 (197)
170 TIGR01993 Pyr-5-nucltdase pyri 90.2 0.7 1.5E-05 46.3 6.7 98 564-682 84-181 (184)
171 PLN02177 glycerol-3-phosphate 90.1 1.8 3.9E-05 50.4 10.6 100 565-686 111-215 (497)
172 TIGR01680 Veg_Stor_Prot vegeta 89.9 1.6 3.4E-05 46.0 9.0 89 562-672 143-235 (275)
173 PRK10725 fructose-1-P/6-phosph 89.7 0.75 1.6E-05 46.2 6.5 90 569-681 92-181 (188)
174 TIGR01689 EcbF-BcbF capsule bi 89.4 0.75 1.6E-05 42.8 5.5 31 563-593 23-53 (126)
175 COG0637 Predicted phosphatase/ 89.3 0.99 2.1E-05 46.8 7.1 98 563-682 85-182 (221)
176 PF02358 Trehalose_PPase: Treh 86.2 1.2 2.6E-05 46.7 5.5 62 641-703 159-234 (235)
177 COG0647 NagD Predicted sugar p 84.8 6.8 0.00015 41.6 10.2 45 557-601 17-61 (269)
178 COG3700 AphA Acid phosphatase 83.6 2.2 4.7E-05 41.1 5.2 91 565-685 115-211 (237)
179 TIGR01684 viral_ppase viral ph 82.7 2.1 4.5E-05 45.6 5.3 41 565-605 146-187 (301)
180 PRK10748 flavin mononucleotide 82.7 2.6 5.6E-05 44.3 6.2 92 564-683 113-205 (238)
181 COG0241 HisB Histidinol phosph 80.1 7.4 0.00016 38.6 7.8 97 565-681 32-144 (181)
182 TIGR02251 HIF-SF_euk Dullard-l 80.1 1 2.2E-05 44.2 1.9 44 561-605 39-82 (162)
183 TIGR01452 PGP_euk phosphoglyco 79.7 8.5 0.00018 41.5 9.1 49 557-605 11-62 (279)
184 TIGR01663 PNK-3'Pase polynucle 79.0 4 8.7E-05 47.8 6.5 40 565-604 198-249 (526)
185 PHA03398 viral phosphatase sup 77.8 3.9 8.4E-05 43.7 5.4 41 565-605 148-189 (303)
186 COG1877 OtsB Trehalose-6-phosp 75.9 10 0.00022 40.3 7.9 43 560-602 36-79 (266)
187 PF05822 UMPH-1: Pyrimidine 5' 73.8 9.2 0.0002 39.8 6.8 132 563-712 89-241 (246)
188 COG1011 Predicted hydrolase (H 72.7 12 0.00027 38.6 7.8 122 564-712 99-226 (229)
189 TIGR01493 HAD-SF-IA-v2 Haloaci 72.1 3.8 8.3E-05 40.5 3.6 85 564-677 90-174 (175)
190 PTZ00445 p36-lilke protein; Pr 72.0 9.1 0.0002 38.7 6.0 138 512-680 28-199 (219)
191 PRK14194 bifunctional 5,10-met 71.4 14 0.0003 39.9 7.8 65 638-702 136-209 (301)
192 PRK14188 bifunctional 5,10-met 68.8 17 0.00036 39.3 7.7 64 638-701 135-207 (296)
193 COG2503 Predicted secreted aci 65.3 28 0.00061 35.8 7.9 85 565-677 123-211 (274)
194 PRK14170 bifunctional 5,10-met 64.5 23 0.0005 37.9 7.6 63 639-702 135-207 (284)
195 PRK14169 bifunctional 5,10-met 63.5 30 0.00065 37.0 8.3 64 639-702 134-206 (282)
196 PRK14179 bifunctional 5,10-met 62.8 26 0.00056 37.6 7.6 63 639-701 136-207 (284)
197 PRK14174 bifunctional 5,10-met 62.4 23 0.00049 38.2 7.2 62 639-701 137-212 (295)
198 PLN03063 alpha,alpha-trehalose 62.0 82 0.0018 39.5 13.0 37 565-601 533-570 (797)
199 PF06570 DUF1129: Protein of u 61.4 1.7E+02 0.0037 29.8 13.3 12 903-914 183-194 (206)
200 PRK14184 bifunctional 5,10-met 61.1 31 0.00068 37.0 7.9 63 638-701 134-210 (286)
201 PRK14182 bifunctional 5,10-met 58.8 38 0.00082 36.3 8.0 62 640-702 136-207 (282)
202 PRK14166 bifunctional 5,10-met 56.4 41 0.00088 36.0 7.8 64 639-702 135-207 (282)
203 TIGR01647 ATPase-IIIA_H plasma 56.3 2.7E+02 0.0059 34.8 16.2 77 106-192 58-135 (755)
204 PRK14190 bifunctional 5,10-met 56.3 42 0.00092 36.0 7.9 71 630-701 127-207 (284)
205 PF13242 Hydrolase_like: HAD-h 55.6 14 0.00031 30.6 3.5 52 649-701 11-70 (75)
206 TIGR01456 CECR5 HAD-superfamil 54.7 60 0.0013 35.8 9.2 49 557-605 9-65 (321)
207 PRK14167 bifunctional 5,10-met 53.6 48 0.001 35.8 7.8 62 639-701 135-210 (297)
208 PRK14172 bifunctional 5,10-met 53.5 48 0.001 35.5 7.7 64 639-702 136-208 (278)
209 cd02071 MM_CoA_mut_B12_BD meth 52.5 37 0.0008 31.3 6.0 83 520-605 21-105 (122)
210 PRK14186 bifunctional 5,10-met 52.1 61 0.0013 35.0 8.3 63 639-701 136-207 (297)
211 PF12689 Acid_PPase: Acid Phos 51.8 52 0.0011 32.4 7.1 41 564-604 45-86 (169)
212 PRK14191 bifunctional 5,10-met 48.8 60 0.0013 34.8 7.6 64 638-702 134-207 (285)
213 PF00122 E1-E2_ATPase: E1-E2 A 48.6 1.1E+02 0.0024 31.5 9.8 62 109-180 2-64 (230)
214 TIGR01501 MthylAspMutase methy 47.7 82 0.0018 29.7 7.5 83 520-605 23-113 (134)
215 PF00389 2-Hacid_dh: D-isomer 47.5 2.4E+02 0.0051 26.2 11.0 46 639-685 42-89 (133)
216 PF03120 DNA_ligase_OB: NAD-de 46.8 11 0.00025 31.9 1.4 24 150-173 45-69 (82)
217 PLN02897 tetrahydrofolate dehy 46.3 94 0.002 34.2 8.7 63 639-701 192-263 (345)
218 TIGR01459 HAD-SF-IIA-hyp4 HAD- 45.9 19 0.00041 37.8 3.4 95 566-681 140-236 (242)
219 PRK14177 bifunctional 5,10-met 45.5 86 0.0019 33.6 8.1 72 630-701 128-208 (284)
220 PRK14193 bifunctional 5,10-met 44.7 73 0.0016 34.2 7.4 62 639-701 136-209 (284)
221 PRK14175 bifunctional 5,10-met 44.5 57 0.0012 35.1 6.6 63 639-702 136-208 (286)
222 PRK14189 bifunctional 5,10-met 43.5 2.3E+02 0.005 30.5 11.0 170 508-702 12-208 (285)
223 PF13380 CoA_binding_2: CoA bi 43.4 25 0.00055 32.2 3.4 82 517-604 18-104 (116)
224 PRK14187 bifunctional 5,10-met 43.1 92 0.002 33.6 7.9 63 639-701 138-209 (294)
225 TIGR01460 HAD-SF-IIA Haloacid 42.2 45 0.00098 34.8 5.5 48 557-604 7-58 (236)
226 PLN03064 alpha,alpha-trehalose 41.5 1.7E+02 0.0036 37.2 10.9 38 565-602 623-661 (934)
227 PRK14178 bifunctional 5,10-met 40.2 85 0.0019 33.6 7.1 71 630-701 121-201 (279)
228 PRK10792 bifunctional 5,10-met 39.5 86 0.0019 33.7 7.0 64 639-702 137-209 (285)
229 PRK02261 methylaspartate mutas 39.4 1.6E+02 0.0035 27.8 8.2 82 520-604 25-114 (137)
230 PRK11507 ribosome-associated p 39.1 34 0.00075 28.0 3.0 26 140-165 38-63 (70)
231 PF13275 S4_2: S4 domain; PDB: 38.4 20 0.00043 29.0 1.6 27 140-167 34-60 (65)
232 PLN02616 tetrahydrofolate dehy 38.4 1.1E+02 0.0023 34.1 7.6 63 639-701 209-280 (364)
233 PRK14183 bifunctional 5,10-met 38.2 1.1E+02 0.0023 32.9 7.4 63 639-702 135-207 (281)
234 PF01455 HupF_HypC: HupF/HypC 37.4 79 0.0017 25.9 4.9 32 136-167 16-50 (68)
235 TIGR00640 acid_CoA_mut_C methy 36.5 95 0.002 29.2 6.1 83 520-605 24-108 (132)
236 cd02067 B12-binding B12 bindin 35.7 75 0.0016 29.0 5.3 82 520-604 21-104 (119)
237 TIGR02230 ATPase_gene1 F0F1-AT 35.2 1.2E+02 0.0026 26.9 6.0 29 863-891 39-67 (100)
238 TIGR00216 ispH_lytB (E)-4-hydr 35.0 6E+02 0.013 27.3 12.9 167 483-685 73-262 (280)
239 PF15584 Imm44: Immunity prote 34.7 17 0.00038 31.1 0.7 19 157-175 13-31 (94)
240 CHL00200 trpA tryptophan synth 34.5 3E+02 0.0064 29.3 10.1 100 561-685 125-231 (263)
241 PLN02591 tryptophan synthase 34.4 3.1E+02 0.0068 28.9 10.2 103 557-685 109-218 (250)
242 PF06609 TRI12: Fungal trichot 34.3 7.6E+02 0.016 29.8 14.5 22 855-876 297-320 (599)
243 PF02401 LYTB: LytB protein; 34.2 1.7E+02 0.0036 31.5 8.2 167 483-685 71-263 (281)
244 TIGR02250 FCP1_euk FCP1-like p 34.2 66 0.0014 31.2 4.8 42 563-605 57-98 (156)
245 TIGR01657 P-ATPase-V P-type AT 33.0 1.2E+03 0.026 30.4 17.3 36 156-191 235-273 (1054)
246 TIGR01452 PGP_euk phosphoglyco 32.9 1.1E+02 0.0023 32.9 6.8 44 642-685 202-247 (279)
247 TIGR01116 ATPase-IIA1_Ca sarco 32.8 1.2E+03 0.025 30.0 17.1 77 105-191 38-115 (917)
248 PF06506 PrpR_N: Propionate ca 32.6 1.2E+02 0.0027 29.9 6.6 107 568-724 65-172 (176)
249 TIGR01517 ATPase-IIB_Ca plasma 32.3 6.6E+02 0.014 32.4 14.6 35 156-190 172-207 (941)
250 PRK01045 ispH 4-hydroxy-3-meth 31.7 5.9E+02 0.013 27.6 11.9 167 483-685 73-264 (298)
251 COG0279 GmhA Phosphoheptose is 31.6 1E+02 0.0022 30.0 5.3 58 513-598 97-154 (176)
252 COG0078 ArgF Ornithine carbamo 31.1 2.6E+02 0.0056 30.2 8.8 84 567-684 90-180 (310)
253 cd00860 ThrRS_anticodon ThrRS 30.5 1.1E+02 0.0024 25.9 5.3 47 558-604 6-53 (91)
254 PRK14176 bifunctional 5,10-met 30.1 7.3E+02 0.016 26.8 12.2 169 508-701 17-213 (287)
255 cd05017 SIS_PGI_PMI_1 The memb 29.4 87 0.0019 28.6 4.6 38 565-604 55-92 (119)
256 TIGR01106 ATPase-IIC_X-K sodiu 28.8 1.4E+03 0.03 29.6 17.4 79 104-192 105-184 (997)
257 PF12710 HAD: haloacid dehalog 28.7 27 0.00058 34.8 1.1 13 359-371 1-13 (192)
258 KOG3085 Predicted hydrolase (H 28.2 1.3E+02 0.0029 31.3 6.0 98 565-685 114-213 (237)
259 cd02072 Glm_B12_BD B12 binding 28.1 1.3E+02 0.0028 28.1 5.4 82 521-605 22-111 (128)
260 PRK14185 bifunctional 5,10-met 28.1 93 0.002 33.6 5.1 62 639-701 135-210 (293)
261 PRK14171 bifunctional 5,10-met 27.2 7.4E+02 0.016 26.7 11.6 169 508-701 11-208 (288)
262 PF02254 TrkA_N: TrkA-N domain 27.0 4.1E+02 0.0089 23.6 8.7 103 568-683 9-113 (116)
263 PRK12360 4-hydroxy-3-methylbut 26.2 8.4E+02 0.018 26.2 11.8 166 483-685 76-263 (281)
264 smart00306 HintN Hint (Hedgeho 26.1 65 0.0014 28.0 3.1 29 136-164 71-99 (100)
265 KOG3128 Uncharacterized conser 26.1 1.6E+02 0.0035 30.7 6.0 134 565-711 139-289 (298)
266 TIGR02244 HAD-IG-Ncltidse HAD 25.8 1.1E+02 0.0023 34.0 5.1 37 566-602 186-223 (343)
267 PF02219 MTHFR: Methylenetetra 25.2 2.1E+02 0.0045 30.9 7.3 44 550-593 68-112 (287)
268 PF12368 DUF3650: Protein of u 24.8 43 0.00093 22.0 1.1 15 32-48 13-27 (28)
269 COG1188 Ribosome-associated he 24.8 83 0.0018 27.8 3.2 29 140-169 35-63 (100)
270 COG0190 FolD 5,10-methylene-te 24.1 3E+02 0.0066 29.4 7.8 63 639-701 134-205 (283)
271 PRK00208 thiG thiazole synthas 24.0 6.6E+02 0.014 26.4 10.0 53 548-600 88-143 (250)
272 PLN02516 methylenetetrahydrofo 23.5 9.7E+02 0.021 26.0 11.7 169 508-701 18-216 (299)
273 PF03129 HGTP_anticodon: Antic 23.2 1.4E+02 0.0031 25.6 4.6 48 557-604 3-54 (94)
274 cd04728 ThiG Thiazole synthase 22.9 7E+02 0.015 26.2 10.0 52 549-600 89-143 (248)
275 KOG2914 Predicted haloacid-hal 22.6 1.7E+02 0.0037 30.2 5.6 99 565-683 93-193 (222)
276 PRK14173 bifunctional 5,10-met 22.4 2.5E+02 0.0054 30.3 7.0 63 639-701 133-204 (287)
277 COG0309 HypE Hydrogenase matur 22.1 4.1E+02 0.0089 29.2 8.5 85 558-667 219-307 (339)
278 PF06941 NT5C: 5' nucleotidase 22.0 66 0.0014 32.3 2.5 29 564-592 73-101 (191)
279 PRK14168 bifunctional 5,10-met 22.0 1.4E+02 0.003 32.3 5.0 62 639-701 139-214 (297)
280 PRK04980 hypothetical protein; 21.9 1.6E+02 0.0035 26.2 4.5 55 136-195 18-79 (102)
281 KOG2882 p-Nitrophenyl phosphat 21.2 1.4E+02 0.0031 32.0 4.7 48 557-604 31-81 (306)
282 PF14336 DUF4392: Domain of un 21.1 2.3E+02 0.005 30.7 6.5 39 566-604 62-101 (291)
283 COG0272 Lig NAD-dependent DNA 21.0 1.6E+02 0.0035 35.3 5.6 76 150-236 363-440 (667)
284 PRK03692 putative UDP-N-acetyl 20.9 5E+02 0.011 27.3 8.8 122 569-718 94-225 (243)
285 TIGR00676 fadh2 5,10-methylene 20.9 2.5E+02 0.0055 30.0 6.8 43 550-592 56-99 (272)
286 PLN02645 phosphoglycolate phos 20.6 1.8E+02 0.004 31.7 5.9 65 644-711 232-306 (311)
287 KOG3109 Haloacid dehalogenase- 20.4 4.4E+02 0.0094 27.1 7.6 106 557-681 92-200 (244)
288 COG3329 Predicted permease [Ge 20.4 4.6E+02 0.0099 28.3 8.0 60 42-102 188-247 (372)
289 TIGR02370 pyl_corrinoid methyl 20.4 1.1E+02 0.0025 30.8 3.9 81 520-605 106-189 (197)
No 1
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7e-165 Score=1362.52 Aligned_cols=923 Identities=52% Similarity=0.855 Sum_probs=862.8
Q ss_pred cchhcccCChhHHhhhCCHHHHHHHhCCCCCCCCCccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHH
Q 047874 2 LSKMVKEKSFESLSNLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVC 81 (941)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f~~~~~~~lli~ 81 (941)
|.++.+.+|.+.|+++|++|+++++|+||+..||+.+++|..+|++.||+|.+|++++++||.++|+.|++...+++.++
T Consensus 85 l~~i~~~~~~~~L~~~gGv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~va 164 (1034)
T KOG0204|consen 85 LVKIVKEHDLKALNAYGGVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVA 164 (1034)
T ss_pred HHHHhhccchhhhhhccCHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHH
Confidence 66788999999999999999999999999999999988899999999999999999999999999999999999999999
Q ss_pred HHHHhhhcccccCCcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCEEeeeecCCcccCcEE
Q 047874 82 ALLSLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVV 161 (941)
Q Consensus 82 ~~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI 161 (941)
|++|+.+++.+.+...+|+++..|+++++++++++++.+|++++++++|++.....++.|+|||+.++|+..||+||||+
T Consensus 165 AvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv 244 (1034)
T KOG0204|consen 165 AVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIV 244 (1034)
T ss_pred HHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEE
Confidence 99999999999888889999999999999999999999999999999999888888999999999999999999999999
Q ss_pred EEcCCCeeecceEEEecceEEEeeccCCCCCCceecCC-CCCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhcccCC
Q 047874 162 CLKTGDQIPADGLFLNGHSLKVDESSMTGESDRVEVDE-KNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELN 240 (941)
Q Consensus 162 ~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~-~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~ 240 (941)
.++.||.+||||++++|++|.+|||++||||++++|.. .++++++||++.+|.++++|+++|.+|+.|+++..+.....
T Consensus 245 ~lk~GDqvPADGvli~gn~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~ 324 (1034)
T KOG0204|consen 245 QLKIGDQVPADGVLIQGNSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGE 324 (1034)
T ss_pred EeecCCccccceEEEeccceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCC
Confidence 99999999999999999999999999999999999996 78999999999999999999999999999999999998888
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHHHcCC
Q 047874 241 EETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPE 320 (941)
Q Consensus 241 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~ 320 (941)
+++|+|-++++++..+..+++.+|.+++++++++|+.+....+.+. .........+.+.+.|..++.++++++|+
T Consensus 325 e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~-----~~~~~~~~~~~~v~~f~i~VTilVVAVPE 399 (1034)
T KOG0204|consen 325 EETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGT-----GTTWSDEYIQEFVKFFIIAVTILVVAVPE 399 (1034)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCC-----CccccHHHHHHHHHHhhheeEEEEEECCC
Confidence 9999999999999999999999999999999999988765443221 11222344567888899999999999999
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccccch-hhhhHHHHH
Q 047874 321 GLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACS-LELAQNLYE 399 (941)
Q Consensus 321 ~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~ 399 (941)
|||+++++++++++++|.+++.++|.++++|++|+.++||+|||||||.|+|+|.+.|++++.++.+... ..+++...+
T Consensus 400 GLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ 479 (1034)
T KOG0204|consen 400 GLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLD 479 (1034)
T ss_pred CccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999998887743322 357788889
Q ss_pred HHHHHHhccCccccccCCCCC-CccccCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEEEEEEecCCce
Q 047874 400 LLQEAVGLNTTGNVYNSNSLS-TSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKV 478 (941)
Q Consensus 400 ~l~~~~~~~~~~~~~~~~~~~-~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~ 478 (941)
++.++++.|++..+..++..+ ..++.|+|+|+|++.|.. ++|.+++..+.+..+.+++||+|.||+|+++++..+++.
T Consensus 480 ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~-~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~ 558 (1034)
T KOG0204|consen 480 LLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGL-KLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGH 558 (1034)
T ss_pred HHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHH-HhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCe
Confidence 999999999988888766654 678899999999999999 799999999999999999999999999999999887776
Q ss_pred EEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccc--c--ccchhhhhccCcE
Q 047874 479 FHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEA--D--GQVQEKLEETGLT 554 (941)
Q Consensus 479 ~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~--~--~~~~~~~~e~~l~ 554 (941)
| +++|||+|.|+.+|+++.+.+|+..+++++.+..+++.++.|+.+|+||+|+||++..+. + ....++..+.|++
T Consensus 559 y-~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt 637 (1034)
T KOG0204|consen 559 Y-VHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLT 637 (1034)
T ss_pred E-EEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeE
Confidence 6 999999999999999999999999999999999999999999999999999999985443 1 1122356789999
Q ss_pred EEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhh
Q 047874 555 LLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKI 634 (941)
Q Consensus 555 ~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 634 (941)
++|+++++||.|||++++|+.||+|||.|.|+||||..||++||.+|||..++. +..+++|.+|+++++++.++..
T Consensus 638 ~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~----d~~~lEG~eFr~~s~ee~~~i~ 713 (1034)
T KOG0204|consen 638 LLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGG----DFLALEGKEFRELSQEERDKIW 713 (1034)
T ss_pred EEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCC----ccceecchhhhhcCHHHHHhhh
Confidence 999999999999999999999999999999999999999999999999998753 4689999999999999999999
Q ss_pred cCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHH
Q 047874 635 ESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 635 ~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 714 (941)
++.+|+||++|.+|.-+|+.++++|++|+++|||+||+|||+.||||.|||..|+++|||+||++++||+|++|++++++
T Consensus 714 pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~W 793 (1034)
T KOG0204|consen 714 PKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKW 793 (1034)
T ss_pred hhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhHHHHHHhcccCCCCCccCCCCCCCCCCCc
Q 047874 715 GRCVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGRSKPLI 794 (941)
Q Consensus 715 gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~~~~~ 794 (941)
||+.|.||+|+++|+++.|+.++++.|.+....+.+||++.|+||+|++||.+.+++||.|||.+++|+|+|..|+++++
T Consensus 794 GR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~LI 873 (1034)
T KOG0204|consen 794 GRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKPLI 873 (1034)
T ss_pred hhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCc------cccchhHHHHHHHHHHHHHHhhhccCCcccccccCcccHHH
Q 047874 795 TKIMWRNLISQAIYQVAILLTLQFKGRSILGVK------ESVKDTMIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLF 868 (941)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~~ 868 (941)
++.||++++.+++||..+++.+.|.+...|+.. +..+.|++|++||+||+||.+|.|..++.++|+++++|++|
T Consensus 874 t~tMwknil~qa~YQl~vl~iL~F~G~~if~~~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkgi~~N~~F 953 (1034)
T KOG0204|consen 874 TRTMWKNILGQAVYQLIVLFILNFAGKSIFGLNGPLHSPPSVHNTIIFNTFVFCQVFNEINARKIDERNVFKGIFRNRLF 953 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCCCCCchhhheeeehhHHHHHHHHHHHhhcchhHHhHHHHHhcCceE
Confidence 999999999999999999999999998887542 45678999999999999999999999889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccccCCChHHHHHHHHHHHHHHHHHHHHHhccccCcccccchHHhh
Q 047874 869 LAIIGITIALQLVMVEFLKTFADTERLNWGQWAACIGIAAMSWPIGFLIKCIPVSGKQLLPINQEAS 935 (941)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~ 935 (941)
+..+.+.+++|++++.+++.+|++++++|.+|++|+.++++.+++..++|.+|.+..|+.......+
T Consensus 954 ~~ii~~T~v~QviIveF~g~~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~iP~~~~~~~~~~~~~~ 1020 (1034)
T KOG0204|consen 954 CVIITITVVSQVIIVEFGGAFFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCIPVSSLPKLKYAGLGG 1020 (1034)
T ss_pred EEEeeeeeehhhhhhhhcCcceeeecccHHHHHHHHHHHHHHHHHHHHheeccccccccceeeccCc
Confidence 9999999999999999999999999999999999999999999999999999987777765554443
No 2
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-150 Score=1251.68 Aligned_cols=875 Identities=33% Similarity=0.485 Sum_probs=761.7
Q ss_pred CCHHHHHHHhCCCCCCCCCccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHhhhcccccCCcC
Q 047874 18 GGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKE 97 (941)
Q Consensus 18 ~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f~~~~~~~lli~~~ls~~~~~~~~~~~~ 97 (941)
.+++|+++.|++|+++|||++| +.+|+++||+|+++.++.+++|+.+++||.+++..+|+++|++|+.+.
T Consensus 7 ~~v~e~~~~f~t~~~~GLt~~e--v~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~-------- 76 (972)
T KOG0202|consen 7 KSVSEVLAEFGTDLEEGLTSDE--VTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA-------- 76 (972)
T ss_pred CcHHHHHHHhCcCcccCCCHHH--HHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH--------
Confidence 6899999999999999999988 999999999999999999999999999999999999999999999997
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCEEeeeecCCcccCcEEEEcCCCeeecceEEEe
Q 047874 98 GWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLN 177 (941)
Q Consensus 98 ~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~ 177 (941)
.|.++++|.+++++++.++.+|||+++|++++|++. .+..++|+|+|+.+.++++||||||||.++-||+||||.|+++
T Consensus 77 ~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l-~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e 155 (972)
T KOG0202|consen 77 DFDEPFVITLIIVINVTVGFVQEYNAEKALEALKEL-VPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIE 155 (972)
T ss_pred hcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhc-CCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEe
Confidence 466788889999999999999999999999999976 4678999999999999999999999999999999999999999
Q ss_pred cceEEEeeccCCCCCCceecCC-------------CCCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhcccCCCCCh
Q 047874 178 GHSLKVDESSMTGESDRVEVDE-------------KNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETP 244 (941)
Q Consensus 178 g~~l~Vdes~LTGEs~pv~k~~-------------~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~ 244 (941)
..++.||||.|||||.|+.|.. +.|++|+||.|..|.++++|+.||.+|++|++...++..+.++||
T Consensus 156 ~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTP 235 (972)
T KOG0202|consen 156 AKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTP 235 (972)
T ss_pred eeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCc
Confidence 9999999999999999999852 457899999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHHHcCCchhH
Q 047874 245 LQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPL 324 (941)
Q Consensus 245 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~L~~ 324 (941)
+|++++.+...+..+...+++.+.++-+ .++... . ....++.....+|..++++.++++|+|||+
T Consensus 236 Lqk~ld~~G~qLs~~is~i~v~v~~~ni-g~f~~p-~-------------~~g~~fk~~~~~f~IaVsLAVAAIPEGLPa 300 (972)
T KOG0202|consen 236 LQKKLDEFGKQLSKVISFICVGVWLLNI-GHFLDP-V-------------HGGSWFKGALYYFKIAVSLAVAAIPEGLPA 300 (972)
T ss_pred HHHHHHHHHHHHHHHheehhhhHHHhhh-hhhccc-c-------------ccccchhchhhhhhHHHHHHHHhccCCCcc
Confidence 9999999999987555444443333321 222210 0 001112256788899999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccc------cc---------
Q 047874 325 AVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSD------AC--------- 389 (941)
Q Consensus 325 ~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~------~~--------- 389 (941)
.++++++.|.+||+|++++||++.++|+||.+++||+|||||||+|+|+++++|+.+...... ..
T Consensus 301 VvT~tLALG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~ 380 (972)
T KOG0202|consen 301 VVTTTLALGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVF 380 (972)
T ss_pred hhhhhHHHhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceE
Confidence 999999999999999999999999999999999999999999999999999999865432211 00
Q ss_pred -------hhhhhHHHHHHHHHHHhccCccccccCCCCCCccccCCccHHHHHHHHHHhcCCCCcC---------------
Q 047874 390 -------SLELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGMNVDE--------------- 447 (941)
Q Consensus 390 -------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~--------------- 447 (941)
......+....+....++|+.+.+..... +..+-.|.|+|.||..+++ +.++.-..
T Consensus 381 ~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~-~~~~~~G~pTE~AL~vlae-Km~l~~~~~~~~s~~~~~~c~~~ 458 (972)
T KOG0202|consen 381 KDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDA-DCYEKVGEPTEGALIVLAE-KMGLPGTRSTNLSNEEASACNRV 458 (972)
T ss_pred ecCccccccccccHHHHHHHHHHHhhhhhhhhcCch-hhHHhcCCchHHHHHHHHH-HcCCCcchhhcccccccccchhH
Confidence 01112233444556667788777765444 5666789999999999998 77765422
Q ss_pred cccccceeEEeCCCCCCCcEEEEEEecCC-ceEEEEecCcHHHHHhhcccccccCC-eEeeCCHHHHHHHHHHHHHHHhc
Q 047874 448 PKQYCTVINVEAFNSEKKRSGVLMKRINE-KVFHTHWKGAAEMILVMCSHYYVKSG-TIRILDGEERTQIEKIIQEMAAK 525 (941)
Q Consensus 448 ~~~~~~~l~~~~F~s~~k~~sviv~~~~~-~~~~~~~KGa~e~i~~~c~~~~~~~g-~~~~l~~~~~~~~~~~~~~~~~~ 525 (941)
..+.++...++||+|+||+|+|.+....+ ..+.+|+|||+|.|+++|++++..+| ...++++..++.+.+...+++++
T Consensus 459 ~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~ 538 (972)
T KOG0202|consen 459 YSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSE 538 (972)
T ss_pred HHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhc
Confidence 11234566999999999999999986655 45789999999999999999988777 55999999999999999999999
Q ss_pred ccceeeeeeecccc-ccc------cchhhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHH
Q 047874 526 SLRCIAFAHTKAAE-ADG------QVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIA 598 (941)
Q Consensus 526 g~r~l~~a~~~~~~-~~~------~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia 598 (941)
|+||+++|+++.+. ... ...+...|+||+|+|++++.||||++++++|+.|+++||||+|+|||+..||.+||
T Consensus 539 gLRvLalA~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~ 618 (972)
T KOG0202|consen 539 GLRVLALASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIA 618 (972)
T ss_pred cceEEEEEccCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHH
Confidence 99999999997763 111 12245579999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhC
Q 047874 599 IECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAA 678 (941)
Q Consensus 599 ~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A 678 (941)
+++|+...+.. ....+++|.+++++++++..+...++.+|+|++|.+|.+||+.||++|+.|+|+|||.||+|+||.|
T Consensus 619 r~iGi~~~~ed--~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~A 696 (972)
T KOG0202|consen 619 REIGIFSEDED--VSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKA 696 (972)
T ss_pred HHhCCCcCCcc--ccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhc
Confidence 99999875432 4568999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHH
Q 047874 679 DIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLL 758 (941)
Q Consensus 679 ~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l 758 (941)
|||||||.+|+++||++||+|+.||||++|+.+++|||.+|+|+++++.|.++.|+..+...++...++.|.|++|+|+|
T Consensus 697 dIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiL 776 (972)
T KOG0202|consen 697 DIGIAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQIL 776 (972)
T ss_pred ccceeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhHHHHHHhcccCCCCCccCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC------------
Q 047874 759 WVNLIMDTLGALALATEQPTNDLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGV------------ 826 (941)
Q Consensus 759 ~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 826 (941)
|+|+++|.+|+.+|+++||+.|+|++||++++++++++.++.+++..++|....+...+++.....+.
T Consensus 777 WiNlvtDG~PA~aLG~ep~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~~~~~~ 856 (972)
T KOG0202|consen 777 WINLVTDGPPATALGFEPVDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQLAHYNS 856 (972)
T ss_pred eeeeeccCCchhhcCCCCCChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhhhcchhh
Confidence 99999999999999999999999999999999999999998888888877654433322211110011
Q ss_pred -------------ccccchhHHHHHHHHHHHHHHhhhccCCcccccc-cCcccHHHHHHHHHHHHHHHHH--HHHhhhcc
Q 047874 827 -------------KESVKDTMIFNTFVLCQIFNEFNARKLEKKNIFK-GIHKNKLFLAIIGITIALQLVM--VEFLKTFA 890 (941)
Q Consensus 827 -------------~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~-~~~~n~~~~~~~~~~~~~~~~~--~~~~~~~f 890 (941)
......|++|.++++..+||.+++++.+ .++|. ++|+|+||++++++++++|+++ +++++.+|
T Consensus 857 c~~~~~~~~c~~F~~~~~~tMa~tv~V~~emfNaL~~~se~-~slf~~~~~~N~~l~~ai~~S~~~~f~ilYvp~l~~iF 935 (972)
T KOG0202|consen 857 CCRDFYGSRCAVFEDMCPLTMALTVLVFIEMFNALNCLSEN-KSLFTMPPWSNRWLLWAIALSFVLHFLVLYVPPLQRIF 935 (972)
T ss_pred hcccccccchhhhcccccceEEEeehhHHHHHHHhhcccCC-cceEEecccccHHHHHHHHHHHHhhheEEEechhhhhh
Confidence 0123458999999999999999999965 45555 9999999999999999998765 56899999
Q ss_pred cccCCChHHHHHHHHHHHHHHHHHHHHHhcccc
Q 047874 891 DTERLNWGQWAACIGIAAMSWPIGFLIKCIPVS 923 (941)
Q Consensus 891 ~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 923 (941)
+++++++.+|++++.++..+++++|++|++.|+
T Consensus 936 q~~~l~~~ew~~vl~~s~~V~i~dEilK~~~R~ 968 (972)
T KOG0202|consen 936 QTEPLSLAEWLLVLAISSPVIIVDEILKFIARN 968 (972)
T ss_pred eecCCcHHHHHHHHHHhhhhhhHHHHHHHHHHh
Confidence 999999999999999999999999999999983
No 3
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=7.6e-139 Score=1286.54 Aligned_cols=899 Identities=45% Similarity=0.739 Sum_probs=778.7
Q ss_pred chhccc-CChhHHhhhCCHHHHHHHhCCCCCCCCCccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHH
Q 047874 3 SKMVKE-KSFESLSNLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVC 81 (941)
Q Consensus 3 ~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f~~~~~~~lli~ 81 (941)
.+..++ ++.+.|+++|+++++++.|++|.++|||.+++||++|+++||+|++++++++++|++++++|+++++++|+++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ 105 (941)
T TIGR01517 26 TDLTDIFKRAPIYEKLGGAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVA 105 (941)
T ss_pred HHhcCchhhHHHHHHhCCHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHH
Confidence 344445 4678899999999999999999999999333449999999999999999889999999999999999999999
Q ss_pred HHHHhhhccc-----ccCCcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCEEeeeecCCcc
Q 047874 82 ALLSLGFGIK-----QVGLKEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVV 156 (941)
Q Consensus 82 ~~ls~~~~~~-----~~~~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv 156 (941)
++++++.+.. +.++...|++++.++++++++++++++++|+++++.+++++..++.+++|+|||++++|+++||+
T Consensus 106 ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv 185 (941)
T TIGR01517 106 AVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIV 185 (941)
T ss_pred HHHHHHHhhcccccccCccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCC
Confidence 9999987632 23444579999998988999999999999999999999987666789999999999999999999
Q ss_pred cCcEEEEcCCCeeecceEEEecceEEEeeccCCCCCCceecCCC-CCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhh
Q 047874 157 VGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESDRVEVDEK-NPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSI 235 (941)
Q Consensus 157 ~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~-~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~ 235 (941)
|||+|.+++||+|||||++++|+.+.||||+|||||.|+.|.++ +|++|+||.+.+|.+.++|++||.+|++||+.+.+
T Consensus 186 ~GDiV~l~~Gd~IPaD~~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~ 265 (941)
T TIGR01517 186 VGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMEL 265 (941)
T ss_pred CCCEEEECCCCEecccEEEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhh
Confidence 99999999999999999999997779999999999999999854 46899999999999999999999999999999988
Q ss_pred cccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHH
Q 047874 236 SHELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIV 315 (941)
Q Consensus 236 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~ 315 (941)
.+++ +++|+++.++++.+++..+++.++++.++++++.+.......+.... ......+...+..++++++
T Consensus 266 ~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~al~llv 335 (941)
T TIGR01517 266 RAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDT---------EEDAQTFLDHFIIAVTIVV 335 (941)
T ss_pred ccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccc---------chhhHHHHHHHHHHHHHHH
Confidence 7654 56899999999999999988888877777665433222100000000 0001256778889999999
Q ss_pred HHcCCchhHHHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccccchhhhhH
Q 047874 316 VAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQ 395 (941)
Q Consensus 316 ~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~ 395 (941)
++|||+||++++++++.++.+|+|+|+++|+++++|+||++|++|||||||||+|+|+|.+++..+..++.+.......+
T Consensus 336 ~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~ 415 (941)
T TIGR01517 336 VAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPK 415 (941)
T ss_pred hhCCCchHHHHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999876543332211111123
Q ss_pred HHHHHHHHHHhccCccccccCCCCCCccccCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEEEEEEecC
Q 047874 396 NLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRIN 475 (941)
Q Consensus 396 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~ 475 (941)
...+.+..++.+|+...... ++.+..+..|||+|.|+++++. +.+.+....+..+++++.+||+|++|+|+++++..+
T Consensus 416 ~~~~~l~~~~~~~s~~~~~~-~~~~~~~~~g~p~e~All~~~~-~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~ 493 (941)
T TIGR01517 416 HVRNILVEGISLNSSSEEVV-DRGGKRAFIGSKTECALLGFLL-LLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSG 493 (941)
T ss_pred HHHHHHHHHHHhCCCCcccc-CCCCccccCCCccHHHHHHHHH-HcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCC
Confidence 34455666666666543321 1122345679999999999987 666555444455677889999999999999998643
Q ss_pred CceEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccchhhhhccCcEE
Q 047874 476 EKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTL 555 (941)
Q Consensus 476 ~~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~ 555 (941)
+++++++|||||.++++|+.+...+|...++++ .++.+++..++++++|+|++++||++++.++... .+..|+|++|
T Consensus 494 -~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~-~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~-~~~~e~~l~~ 570 (941)
T TIGR01517 494 -GKVREFRKGASEIVLKPCRKRLDSNGEATPISD-DKDRCADVIEPLASDALRTICLAYRDFAPEEFPR-KDYPNGGLTL 570 (941)
T ss_pred -CcEEEEEECChHHHHHhhhHHhhcCCCcccCcH-HHHHHHHHHHHHHhcCCEEEEEEEEecCcccccc-ccccccCcEE
Confidence 458899999999999999987666777777776 6788999999999999999999999886543322 2234789999
Q ss_pred EEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhc
Q 047874 556 LGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIE 635 (941)
Q Consensus 556 lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 635 (941)
+|+++++||+|++++++|++|+++||+++|+|||++.||.++|+++||..+ ...+++|.+++++.++++.+.+.
T Consensus 571 lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~------~~~vi~G~~~~~l~~~el~~~i~ 644 (941)
T TIGR01517 571 IGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTF------GGLAMEGKEFRRLVYEEMDPILP 644 (941)
T ss_pred EEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCC------CceEeeHHHhhhCCHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999864 34799999999999999999999
Q ss_pred CceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHH
Q 047874 636 SIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWG 715 (941)
Q Consensus 636 ~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~g 715 (941)
+..||||++|+||.++|+.+|++|++|+|+|||.||+|||++||||||||.+|+|.|+++||+++.+++|..+++++++|
T Consensus 645 ~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~g 724 (941)
T TIGR01517 645 KLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWG 724 (941)
T ss_pred cCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhHHHHHHhcccCCCCCccCCCCCCCCCCCcc
Q 047874 716 RCVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGRSKPLIT 795 (941)
Q Consensus 716 R~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~~~~~~ 795 (941)
|++|+|+++++.|.+++|+..+++.+++.++++++|++++|++|+|+++|.+|+++++.|+|++++|++||+++++++++
T Consensus 725 R~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~ 804 (941)
T TIGR01517 725 RNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLIS 804 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCC
Confidence 99999999999999999999999999988888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccCC---------ccccchhHHHHHHHHHHHHHHhhhccCCcccccccCcccH
Q 047874 796 KIMWRNLISQAIYQVAILLTLQFKGRSILGV---------KESVKDTMIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNK 866 (941)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~ 866 (941)
+.+|..++.++++++++.+++++.+..+++. .....+|++|.+++++|++|.+++|+.+..++|+++++|+
T Consensus 805 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~ 884 (941)
T TIGR01517 805 RSMWKNILGQAGYQLVVTFILLFAGGSIFDVSGPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNR 884 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccccccccchhhHHHHHHHHHHHHHHHHHHccCCcccccccccccH
Confidence 9999999999999988877776655544422 1256789999999999999999999865557888889999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccccCCChHHHHHHHHHHHHHHHHHHHHHhccc
Q 047874 867 LFLAIIGITIALQLVMVEFLKTFADTERLNWGQWAACIGIAAMSWPIGFLIKCIPV 922 (941)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~~~ 922 (941)
+++.++++++++|++++++++.+|++.|+++.+|+++++++++.+++.|+.|.+++
T Consensus 885 ~~~~~~~~~~~l~~~~~~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~~~ 940 (941)
T TIGR01517 885 IFVTIMGFTFGFQVIIVEFGGSFFSTVSLSIEQWIGCVLLGMLSLIFGVLLRLIPV 940 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999999999874
No 4
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=1.9e-135 Score=1252.77 Aligned_cols=865 Identities=27% Similarity=0.436 Sum_probs=735.8
Q ss_pred hCCHHHHHHHhCCCCCCCCCccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHhhhcccccCCc
Q 047874 17 LGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLK 96 (941)
Q Consensus 17 ~~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f~~~~~~~lli~~~ls~~~~~~~~~~~ 96 (941)
-.+++++++.|+++..+|||++| +++|+++||+|++++++.+++|+.+++||++|++++++++++++++.+
T Consensus 9 ~~~~~~v~~~l~t~~~~GLs~~e--a~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~------- 79 (1053)
T TIGR01523 9 SDIADEAAEFIGTSIPEGLTHDE--AQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH------- 79 (1053)
T ss_pred hCCHHHHHHHhCcCcccCCCHHH--HHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh-------
Confidence 45889999999999989999988 999999999999999988899999999999999999999999999876
Q ss_pred CccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCEEeeeecCCcccCcEEEEcCCCeeecceEEE
Q 047874 97 EGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFL 176 (941)
Q Consensus 97 ~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll 176 (941)
.|.+++.++++++++.++++++++++++..+++.++ .+.+++|+|||++++|+++||||||||.|++||+|||||+|+
T Consensus 80 -~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l-~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi 157 (1053)
T TIGR01523 80 -DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNL-ASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLI 157 (1053)
T ss_pred -hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEEE
Confidence 689999999999999999999999999999999976 456899999999999999999999999999999999999999
Q ss_pred ecceEEEeeccCCCCCCceecCC--------------CCCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhcccCC--
Q 047874 177 NGHSLKVDESSMTGESDRVEVDE--------------KNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELN-- 240 (941)
Q Consensus 177 ~g~~l~Vdes~LTGEs~pv~k~~--------------~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~-- 240 (941)
++++|.||||+|||||.|+.|.+ ..|++|+||.|.+|.+.++|++||.+|++||+.+.+.+...
T Consensus 158 ~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~~ 237 (1053)
T TIGR01523 158 ETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLF 237 (1053)
T ss_pred EeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhcc
Confidence 99999999999999999999963 23689999999999999999999999999999998754321
Q ss_pred ---------------------------------CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcc
Q 047874 241 ---------------------------------EETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKR 287 (941)
Q Consensus 241 ---------------------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (941)
.+||+|+++++++.++..+++.++++++++... .
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~----~--------- 304 (1053)
T TIGR01523 238 QRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF----D--------- 304 (1053)
T ss_pred ccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh----h---------
Confidence 249999999999998887777776665543211 0
Q ss_pred cccCCccccccchhhHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCccccc
Q 047874 288 EFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTL 367 (941)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTL 367 (941)
.....+.++++++++++|++||+.++++++++++||+++++++|+++++|+||++++||+||||||
T Consensus 305 --------------~~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTL 370 (1053)
T TIGR01523 305 --------------VDKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTI 370 (1053)
T ss_pred --------------hhHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCcc
Confidence 113456678999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCceEEEEEEeCCc-c---------cccc-cc---------------h--------------h--h----hhHHHHHHH
Q 047874 368 TLNQMKVTEFWLGKE-A---------MKSD-AC---------------S--------------L--E----LAQNLYELL 401 (941)
Q Consensus 368 T~~~~~v~~~~~~~~-~---------~~~~-~~---------------~--------------~--~----~~~~~~~~l 401 (941)
|+|+|+|+++|..+. . +... .. . . + ..+...+.+
T Consensus 371 T~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 450 (1053)
T TIGR01523 371 TQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKL 450 (1053)
T ss_pred ccceEEEEEEEEcCCceEEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHH
Confidence 999999999987531 1 1000 00 0 0 0 000112234
Q ss_pred HHHHhccCccccccCCCCCCccccCCccHHHHHHHHHHhcCCCCc------C-------------------cccccceeE
Q 047874 402 QEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGMNVD------E-------------------PKQYCTVIN 456 (941)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~------~-------------------~~~~~~~l~ 456 (941)
..+..+|+.+.....++.......|||+|.|+++++. +.|.+.. . ....++++.
T Consensus 451 l~~~~lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (1053)
T TIGR01523 451 LETAALANIATVFKDDATDCWKAHGDPTEIAIHVFAK-KFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIA 529 (1053)
T ss_pred HHHHHhccCCeeeccCCCCceeeCcCccHHHHHHHHH-HcCCCcccccchhhhhhhccccccccccccccccccccceEE
Confidence 4455667766554322222234579999999999997 6776421 0 123478899
Q ss_pred EeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHhhcccccccCC-eEeeCCHHHHHHHHHHHHHHHhcccceeeeeee
Q 047874 457 VEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCSHYYVKSG-TIRILDGEERTQIEKIIQEMAAKSLRCIAFAHT 535 (941)
Q Consensus 457 ~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~c~~~~~~~g-~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~ 535 (941)
++||+|+||||++++++.+++.+++|+|||||.|+++|+++...+| ...+++++.++.+.+..++++++|+||+++|||
T Consensus 530 ~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r 609 (1053)
T TIGR01523 530 EFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASK 609 (1053)
T ss_pred EeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEE
Confidence 9999999999999998765556889999999999999997765444 567899999999999999999999999999999
Q ss_pred cccccccc--------chhhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCC
Q 047874 536 KAAEADGQ--------VQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPD 607 (941)
Q Consensus 536 ~~~~~~~~--------~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~ 607 (941)
+++..+.. ..++..|+|++|+|+++++||+|++++++|++|+++||+++|+|||++.||.++|+++||..++
T Consensus 610 ~l~~~~~~~~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~ 689 (1053)
T TIGR01523 610 SFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPN 689 (1053)
T ss_pred ECCchhccchhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcc
Confidence 88653211 0123468999999999999999999999999999999999999999999999999999997542
Q ss_pred CCC----CcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEE
Q 047874 608 VDL----NKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLS 683 (941)
Q Consensus 608 ~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIa 683 (941)
... .....+++|.+++.++++++.+...+..||||++|+||.++|+.+|++|++|+|+|||.||+|||++||||||
T Consensus 690 ~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIA 769 (1053)
T TIGR01523 690 FIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIA 769 (1053)
T ss_pred ccccccccccceeeehHHhhhcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEe
Confidence 111 0134799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----C-CCchhHHHHH
Q 047874 684 MGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFGAAVSS----G-KVPLTAVQLL 758 (941)
Q Consensus 684 m~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~----~-~~~l~~~~~l 758 (941)
||.+|++.++++||+++.+++|..+.+++++||++|+|+++++.|.+++|+..+++.+++.++. . +.|++|+|++
T Consensus 770 mg~~gt~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL 849 (1053)
T TIGR01523 770 MGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEIL 849 (1053)
T ss_pred cCCCccHHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHH
Confidence 9988999999999999999999999999999999999999999999999999998888877773 2 5799999999
Q ss_pred HHHhhhhHHHHHHhcccCCCCCccCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHH---hhc--c--------cC
Q 047874 759 WVNLIMDTLGALALATEQPTNDLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQFK---GRS--I--------LG 825 (941)
Q Consensus 759 ~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~--------~~ 825 (941)
|+|+++|.+|+++|++|+|++++|++||+.++++++++.++..++..+++.++..+..+++ +.. . ++
T Consensus 850 ~inli~d~~palaL~~e~~~~~~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 929 (1053)
T TIGR01523 850 WCIMITSCFPAMGLGLEKAAPDLMDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYH 929 (1053)
T ss_pred HHHHHHHHHHHHhhccCCCChhHHhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccccccc
Confidence 9999999999999999999999999999999999999999988888888877665544432 100 0 00
Q ss_pred C---ccccchhHHHHHHHHHHHHHHhhhccCCcccccc----------------cCcccHHHHHHHHHHHHHHHHH--HH
Q 047874 826 V---KESVKDTMIFNTFVLCQIFNEFNARKLEKKNIFK----------------GIHKNKLFLAIIGITIALQLVM--VE 884 (941)
Q Consensus 826 ~---~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~----------------~~~~n~~~~~~~~~~~~~~~~~--~~ 884 (941)
. +..+++|++|.+++++|+++.+++|+. +.++|+ +.|+|+++++++++++++++++ +|
T Consensus 930 ~~~~~~~~a~t~~f~~l~~~~~~~~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p 1008 (1053)
T TIGR01523 930 AGCNDVFKARSAAFATMTFCALILAVEVKDF-DNSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPTIYIP 1008 (1053)
T ss_pred ccccchhhhHHHHHHHHHHHHHHHHHHHhcC-chhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHHHHHhhh
Confidence 0 134578999999999999999999985 344443 3689999999999888888665 45
Q ss_pred Hhhh-cccccCCChHHHHHHHHHHHHHHHHHHHHHhccc
Q 047874 885 FLKT-FADTERLNWGQWAACIGIAAMSWPIGFLIKCIPV 922 (941)
Q Consensus 885 ~~~~-~f~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~~~ 922 (941)
+++. +|++.|+++ .|+++++++++.+++.|++|++.|
T Consensus 1009 ~~~~~~f~~~~l~~-~w~~~~~~~~~~~~~~e~~K~~~r 1046 (1053)
T TIGR01523 1009 VINDDVFKHKPIGA-EWGLAAAATIAFFFGAEIWKCGKR 1046 (1053)
T ss_pred hhhhhhhccCCcch-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6775 999999997 899999999999999999999875
No 5
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=5.1e-131 Score=1209.67 Aligned_cols=841 Identities=32% Similarity=0.507 Sum_probs=739.4
Q ss_pred CCHHHHHHHhCCCCCCCCC-ccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHh-hHHHHHHHHHHHHHHhhhcccccCC
Q 047874 18 GGVNQVASILDCDTKGGIR-GSEADLGHRINVFGRNRYKKPPAKRFISFVFEAF-KDTTIIILLVCALLSLGFGIKQVGL 95 (941)
Q Consensus 18 ~~~~~~~~~l~~~~~~GLs-~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f-~~~~~~~lli~~~ls~~~~~~~~~~ 95 (941)
-+.+++++.|++|..+||| ++| +++|+++||+|+++.++++++|+.++++| ++|++++++++++++++.+
T Consensus 7 ~~~~~v~~~l~t~~~~GLs~~~e--v~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g------ 78 (884)
T TIGR01522 7 LSVEETCSKLQTDLQNGLNSSQE--ASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG------ 78 (884)
T ss_pred CCHHHHHHHhCcCcccCCCcHHH--HHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc------
Confidence 3899999999999999999 655 99999999999999988889999999999 9999999999999999886
Q ss_pred cCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCEEeeeecCCcccCcEEEEcCCCeeecceEE
Q 047874 96 KEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLF 175 (941)
Q Consensus 96 ~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~l 175 (941)
.|.++..+++++++++.+++++++++++..+++.+. .+.+++|+|||++++|+++||||||+|.+++||+|||||++
T Consensus 79 --~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l-~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~i 155 (884)
T TIGR01522 79 --NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKL-VPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRI 155 (884)
T ss_pred --chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEE
Confidence 688888888888888999999999999999999865 45689999999999999999999999999999999999999
Q ss_pred EecceEEEeeccCCCCCCceecCCC-------------CCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhcccCCCC
Q 047874 176 LNGHSLKVDESSMTGESDRVEVDEK-------------NPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEE 242 (941)
Q Consensus 176 l~g~~l~Vdes~LTGEs~pv~k~~~-------------~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~ 242 (941)
++|+++.||||+|||||.|+.|.++ +|++|+||.+.+|.+.++|++||.+|++|++.+.+.+...++
T Consensus 156 i~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~k 235 (884)
T TIGR01522 156 VEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPK 235 (884)
T ss_pred EEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCCC
Confidence 9998789999999999999999864 258999999999999999999999999999999998888889
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHHHcCCch
Q 047874 243 TPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGL 322 (941)
Q Consensus 243 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~L 322 (941)
+|+++.+++++.++..++++++++++++ .|+.+. ++...+..++++++++|||+|
T Consensus 236 t~lq~~l~~l~~~~~~~~~~~~~~~~~~---~~~~~~----------------------~~~~~~~~~v~llv~aiP~~L 290 (884)
T TIGR01522 236 TPLQKSMDLLGKQLSLVSFGVIGVICLV---GWFQGK----------------------DWLEMFTISVSLAVAAIPEGL 290 (884)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHhcC----------------------CHHHHHHHHHHHHHHHccchH
Confidence 9999999999999887665554433333 222221 456778889999999999999
Q ss_pred hHHHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCccccc--------ccc-----
Q 047874 323 PLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKS--------DAC----- 389 (941)
Q Consensus 323 ~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~--------~~~----- 389 (941)
|++++++++.++++|+++|+++|+++++|+||++|++|||||||||+|+|+|.+++..+..... +..
T Consensus 291 p~~vt~~l~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (884)
T TIGR01522 291 PIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDG 370 (884)
T ss_pred HHHHHHHHHHHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccc
Confidence 9999999999999999999999999999999999999999999999999999999875532110 000
Q ss_pred ---hhhhhHHHHHHHHHHHhccCccccccCCCCCCccccCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCc
Q 047874 390 ---SLELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKR 466 (941)
Q Consensus 390 ---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~ 466 (941)
....++...+.+ ...++|++...... ..+..|||+|.|+++++. +.|.+ ..+..++.++++||+|++||
T Consensus 371 ~~~~~~~~~~~~~~l-~~~~l~~~~~~~~~----~~~~~g~p~e~All~~~~-~~~~~--~~~~~~~~~~~~pF~s~~k~ 442 (884)
T TIGR01522 371 DVLHGFYTVAVSRIL-EAGNLCNNAKFRNE----ADTLLGNPTDVALIELLM-KFGLD--DLRETYIRVAEVPFSSERKW 442 (884)
T ss_pred cccccccCHHHHHHH-HHHhhhCCCeecCC----CCCcCCChHHHHHHHHHH-HcCcH--hHHhhCcEEeEeCCCCCCCe
Confidence 000111223334 34445655443211 123468999999999987 55543 23345778899999999999
Q ss_pred EEEEEEecCCceEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccchh
Q 047874 467 SGVLMKRINEKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQE 546 (941)
Q Consensus 467 ~sviv~~~~~~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~ 546 (941)
|+++++...++++++++||+||.|+++|+++...+|...+++++.++.+++..++++++|+|++++||+++
T Consensus 443 m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--------- 513 (884)
T TIGR01522 443 MAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE--------- 513 (884)
T ss_pred EEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC---------
Confidence 99999875556688999999999999999887777888889988899999999999999999999999875
Q ss_pred hhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCC
Q 047874 547 KLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLS 626 (941)
Q Consensus 547 ~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~ 626 (941)
+++++|+|+++++||+|++++++|++|+++|++++|+|||+..+|.++|+++|+... ...+++|.+++.++
T Consensus 514 ---~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~------~~~~v~g~~l~~~~ 584 (884)
T TIGR01522 514 ---KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSK------TSQSVSGEKLDAMD 584 (884)
T ss_pred ---CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC------CCceeEhHHhHhCC
Confidence 357999999999999999999999999999999999999999999999999999864 34578999999999
Q ss_pred HHHHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCch
Q 047874 627 AEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFS 706 (941)
Q Consensus 627 ~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~ 706 (941)
++++.+.+.+..+|||++|+||.++|+.+|++|++|+|+|||.||+||+++||||||||.++++.++++||+++.+|++.
T Consensus 585 ~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~ 664 (884)
T TIGR01522 585 DQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFA 664 (884)
T ss_pred HHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999998679999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhHHHHHHhcccCCCCCccCCCC
Q 047874 707 SVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPP 786 (941)
Q Consensus 707 ~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~p 786 (941)
.+.+++++||++++|+++++.|.++.|+..+++.+++.++..+.|++++|++|+|+++|.+|+++|++|+|++++|++||
T Consensus 665 ~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P 744 (884)
T TIGR01522 665 TILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPP 744 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCC
Confidence 99999999999999999999999999999998888888888899999999999999999999999999999999999999
Q ss_pred CCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCccccchhHHHHHHHHHHHHHHhhhccCCcccccc-cCccc
Q 047874 787 VGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGVKESVKDTMIFNTFVLCQIFNEFNARKLEKKNIFK-GIHKN 865 (941)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~-~~~~n 865 (941)
++++++++++.+|..+++++++++++.++++++... .+.....++|++|.+++++|++|.+++|+. +.++|+ ++++|
T Consensus 745 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~-~~~~~~~~~~~n 822 (884)
T TIGR01522 745 RPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQ-DGVITARDTTMTFTCFVFFDMFNALACRSQ-TKSVFEIGFFSN 822 (884)
T ss_pred CCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcchhhHHHHHHHHHHHHHHHHHHHHccC-CccccccCcccC
Confidence 999999999999999999999988776665554321 122234578999999999999999999994 567776 78999
Q ss_pred HHHHHHHHHHHHHHHHHH--HHhhhcccccCCChHHHHHHHHHHHHHHHHHHHHHhccc
Q 047874 866 KLFLAIIGITIALQLVMV--EFLKTFADTERLNWGQWAACIGIAAMSWPIGFLIKCIPV 922 (941)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~--~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~~~ 922 (941)
++++++++++++++++++ |+++.+|++.|+++.+|+++++++++.+++.|++|++.|
T Consensus 823 ~~~~~~~~~~~~~~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~ 881 (884)
T TIGR01522 823 RMFNYAVGGSIIGQLLVIYFPPLQSVFQTEALSIKDLLFLLLITSSVCIVDEIRKKVER 881 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999887765 478999999999999999999999999999999999875
No 6
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=4.9e-131 Score=1219.35 Aligned_cols=877 Identities=26% Similarity=0.367 Sum_probs=740.9
Q ss_pred hhCCHHHHHHHhCCCCCCCCCccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHhhhccccc--
Q 047874 16 NLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVCALLSLGFGIKQV-- 93 (941)
Q Consensus 16 ~~~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f~~~~~~~lli~~~ls~~~~~~~~-- 93 (941)
+-.+.+++++.|++|.++|||++| +++|+++||+|++++++++++|+.++++|++|++++++++++++++......
T Consensus 18 ~~~~~~~~~~~l~t~~~~GLs~~e--~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~ 95 (997)
T TIGR01106 18 HKLSLDELERKYGTDLSKGLSAAR--AAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQAST 95 (997)
T ss_pred hhCCHHHHHHHhCcCcccCCCHHH--HHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhcc
Confidence 455999999999999999999987 9999999999999988888999999999999999999999999776532110
Q ss_pred ---CCcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCEEeeeecCCcccCcEEEEcCCCeee
Q 047874 94 ---GLKEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIP 170 (941)
Q Consensus 94 ---~~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~G~~iP 170 (941)
.....|++++.++++++++.+++.++++++++..+++.+. .+.+++|+|||++++|+++||||||+|.+++||+||
T Consensus 96 ~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~-~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IP 174 (997)
T TIGR01106 96 EEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNM-VPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIP 174 (997)
T ss_pred CCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEe
Confidence 1123678888888888888888999999999999988865 467899999999999999999999999999999999
Q ss_pred cceEEEecceEEEeeccCCCCCCceecCCCC---------CeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhcccCCC
Q 047874 171 ADGLFLNGHSLKVDESSMTGESDRVEVDEKN---------PFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNE 241 (941)
Q Consensus 171 aD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~---------~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~ 241 (941)
|||++++|+++.||||+|||||.|+.|.+++ |++|+||.+.+|.+.++|++||.+|.+|++.+.+.+...+
T Consensus 175 aD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~ 254 (997)
T TIGR01106 175 ADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLENG 254 (997)
T ss_pred eeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcccC
Confidence 9999999988899999999999999997543 5799999999999999999999999999999988877778
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHHHcCCc
Q 047874 242 ETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEG 321 (941)
Q Consensus 242 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~ 321 (941)
++|+++.++++..++..+++++++++++++++ .+. .+...+..++++++++|||+
T Consensus 255 ~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----------------------~~~~~~~~~i~v~v~~iP~~ 309 (997)
T TIGR01106 255 KTPIAIEIEHFIHIITGVAVFLGVSFFILSLI---LGY----------------------TWLEAVIFLIGIIVANVPEG 309 (997)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcC----------------------CHHHHHHHHHHHHhhcCCcc
Confidence 89999999999999888877777665554322 221 34567778899999999999
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccccc------hhhhhH
Q 047874 322 LPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDAC------SLELAQ 395 (941)
Q Consensus 322 L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~------~~~~~~ 395 (941)
||++++++++.++++|+++|+++|+++++|+||++|++|||||||||+|+|+|.+++.++..+..+.. ......
T Consensus 310 L~~~v~i~l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (997)
T TIGR01106 310 LLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSS 389 (997)
T ss_pred chHHHHHHHHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCccc
Confidence 99999999999999999999999999999999999999999999999999999999987654432210 000111
Q ss_pred HHHHHHHHHHhccCccccccCCCC---CCccccCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEEEEEE
Q 047874 396 NLYELLQEAVGLNTTGNVYNSNSL---STSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMK 472 (941)
Q Consensus 396 ~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~ 472 (941)
...+.+...+++|+++......+. ......|||+|.|+++++. +.+.+....+..++++..+||+|+||||+++++
T Consensus 390 ~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~-~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~ 468 (997)
T TIGR01106 390 ATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIE-LCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHE 468 (997)
T ss_pred HHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHH-HhCCCHHHHHhhCceeEEeccCCCCceEEEEEe
Confidence 223344456677776554321111 1235679999999999987 444444445567888999999999999999886
Q ss_pred ec--CCceEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccc----h-
Q 047874 473 RI--NEKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQV----Q- 545 (941)
Q Consensus 473 ~~--~~~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~----~- 545 (941)
.. +++.+++|+|||||.|+++|+++. .+|...+++++.++.+++..++++++|+||+++|||.++.++... .
T Consensus 469 ~~~~~~~~~~~~~KGApe~Il~~c~~~~-~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~ 547 (997)
T TIGR01106 469 NEDPRDPRHLLVMKGAPERILERCSSIL-IHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDT 547 (997)
T ss_pred ccCCCCceEEEEEeCChHHHHHHhhHHh-cCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccc
Confidence 43 234688999999999999999776 578888899999999999999999999999999999886543221 1
Q ss_pred --hhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCC--------------
Q 047874 546 --EKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVD-------------- 609 (941)
Q Consensus 546 --~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~-------------- 609 (941)
.+..|+|++|+|+++++||+|++++++|++|+++||+++|+|||++.+|.++|+++|+..++..
T Consensus 548 ~~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~ 627 (997)
T TIGR01106 548 DDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVS 627 (997)
T ss_pred hhhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhcccccc
Confidence 1123889999999999999999999999999999999999999999999999999999754321
Q ss_pred ----CCcccceecchhcccCCHHHHHHhhcCce--EEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEE
Q 047874 610 ----LNKDEAVIEGVQFRSLSAEERIAKIESIR--VMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLS 683 (941)
Q Consensus 610 ----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIa 683 (941)
.+....+++|.+++.++++++.+.+.+.. ||||++|+||.++|+.+|+.|++|+|+|||.||+|||++||||||
T Consensus 628 ~~~~~~~~~~vi~G~~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGia 707 (997)
T TIGR01106 628 QVNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVA 707 (997)
T ss_pred ccccccccceEEEhHHhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCccee
Confidence 01123699999999999999999888764 999999999999999999999999999999999999999999999
Q ss_pred ecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhh
Q 047874 684 MGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLI 763 (941)
Q Consensus 684 m~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~ 763 (941)
||.+|++.++++||+++.+|+|+.+++++++||++|.|+++++.|.++.|+..+++.+++.++..++|++++|++|+|++
T Consensus 708 mg~~G~~vak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli 787 (997)
T TIGR01106 708 MGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLG 787 (997)
T ss_pred cCCcccHHHHHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHH
Confidence 99779999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHhcccCCCCCccCCCCCCC-CCCCccHHHHHHH-HHHHHHHHHHHHHHHHHhhc--------ccCC-------
Q 047874 764 MDTLGALALATEQPTNDLMSKPPVGR-SKPLITKIMWRNL-ISQAIYQVAILLTLQFKGRS--------ILGV------- 826 (941)
Q Consensus 764 ~~~~~~~~l~~~~~~~~~~~~~p~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--------~~~~------- 826 (941)
+|.+|++++++|+|++++|++||+++ ..+++++.++..+ +..+++++++.++.++.... .++.
T Consensus 788 ~d~lp~~al~~e~~~~~~m~~~P~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 867 (997)
T TIGR01106 788 TDMVPAISLAYEKAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDR 867 (997)
T ss_pred HHHHHHHHHhcCCCCcccccCCCcCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccc
Confidence 99999999999999999999999985 6789988776554 34466665544443322110 0110
Q ss_pred -------c-------------cccchhHHHHHHHHHHHHHHhhhccCCcccccccCcccHHHHHHHHHHHHHHHHH--HH
Q 047874 827 -------K-------------ESVKDTMIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVM--VE 884 (941)
Q Consensus 827 -------~-------------~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~ 884 (941)
. ....+|++|.+++++|++|.++||+. +.++|+..++|++++.++++.+++++++ +|
T Consensus 868 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~R~~-~~~~f~~~~~n~~l~~~~~~~~~l~~~~~~~p 946 (997)
T TIGR01106 868 WINDLEDSYGQEWTYEQRKYVEFTCHTAFFVSIVVVQWADLIICKTR-RNSVFQQGMKNKILIFGLFEETALAAFLSYCP 946 (997)
T ss_pred cccccccccccccchhcccchhhhhhHHHHHHHHHHHHHHHHHhccC-cccccccCCcCHHHHHHHHHHHHHHHHHHHhh
Confidence 0 01468999999999999999999994 5677764489999998888888777654 45
Q ss_pred HhhhcccccCCChHHHHHHHHHHHHHHHHHHHHHhcccc
Q 047874 885 FLKTFADTERLNWGQWAACIGIAAMSWPIGFLIKCIPVS 923 (941)
Q Consensus 885 ~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 923 (941)
+++.+|++.++++.+|+++++++++.+++.++.|++.|+
T Consensus 947 ~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~r~ 985 (997)
T TIGR01106 947 GMGVALRMYPLKPTWWFCAFPYSLLIFVYDEIRKLIIRR 985 (997)
T ss_pred hhHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 679999999999999999999999999999999998864
No 7
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-130 Score=1196.41 Aligned_cols=855 Identities=34% Similarity=0.509 Sum_probs=732.0
Q ss_pred CCHH--HHHHHhCCCCCCCCCccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHhhhcccccCC
Q 047874 18 GGVN--QVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVCALLSLGFGIKQVGL 95 (941)
Q Consensus 18 ~~~~--~~~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f~~~~~~~lli~~~ls~~~~~~~~~~ 95 (941)
.+++ ++...+.++..+||+++| +.+|+++||+|+++..+..++|..++.||+++++++++++++++++.+......
T Consensus 26 ~~~~~~~~~~~~~~~~~~GLs~~e--~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~ 103 (917)
T COG0474 26 LSVERNELLLELFTSPTTGLSEEE--VKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWVDAG 103 (917)
T ss_pred cccchhhHHHhhcCCcccCCCHHH--HHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccC
Confidence 3566 999999999999999977 999999999999999888899999999999999999999999998876211000
Q ss_pred cCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCEEeeeecCCcccCcEEEEcCCCeeecceEE
Q 047874 96 KEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLF 175 (941)
Q Consensus 96 ~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~l 175 (941)
.+...++..++++.+++.++++++++..++++++. +.+++|+|||++++|+++||||||||.+++||+||||++|
T Consensus 104 ----~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~-~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rL 178 (917)
T COG0474 104 ----VDAIVILLVVVINALLGFVQEYRAEKALEALKKMS-SPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRL 178 (917)
T ss_pred ----cceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEE
Confidence 34456777788889999999999999999998764 6799999999999999999999999999999999999999
Q ss_pred EecceEEEeeccCCCCCCceecC-------------CCCCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhcccCCCC
Q 047874 176 LNGHSLKVDESSMTGESDRVEVD-------------EKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEE 242 (941)
Q Consensus 176 l~g~~l~Vdes~LTGEs~pv~k~-------------~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~ 242 (941)
++++++.||||+|||||.|+.|. ..+|++|+||.+.+|.+.++|++||.+|++|++...+.......
T Consensus 179 l~~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~ 258 (917)
T COG0474 179 LESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVK 258 (917)
T ss_pred EEecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccccC
Confidence 99999999999999999999996 34789999999999999999999999999999999998776789
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHHHcCCch
Q 047874 243 TPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGL 322 (941)
Q Consensus 243 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~L 322 (941)
+|+++.++++..++..+++.++++.+++. ++.+.. .+...+..++++++.++|++|
T Consensus 259 t~l~~~l~~~~~~l~~~~l~~~~~~~~~~---~~~~~~---------------------~~~~~~~~~v~l~va~IPegL 314 (917)
T COG0474 259 TPLQRKLNKLGKFLLVLALVLGALVFVVG---LFRGGN---------------------GLLESFLTALALAVAAVPEGL 314 (917)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhcCc---------------------cHHHHHHHHHHHHHhccccch
Confidence 99999999999999998888877777664 222210 256889999999999999999
Q ss_pred hHHHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccccchhhhhHHHHHHHH
Q 047874 323 PLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQ 402 (941)
Q Consensus 323 ~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 402 (941)
|+.++++++.++.+|+++++++|+++++|+||++|+||+|||||||+|+|+|++++..+...+.+.......+... .+.
T Consensus 315 p~~vti~la~g~~~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~-~~l 393 (917)
T COG0474 315 PAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALL-RFL 393 (917)
T ss_pred HHHHHHHHHHHHHHHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHH-HHH
Confidence 9999999999999999999999999999999999999999999999999999999998411111100011111222 334
Q ss_pred HHHhccCccccccCCCCCCccccCCccHHHHHHHHHHhcCC--CCcCcccccceeEEeCCCCCCCcEEEEEEecCCceEE
Q 047874 403 EAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGM--NVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFH 480 (941)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~--~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~ 480 (941)
..+++||+...... + ++..|||+|.|+++++. +.|. +....+..+++++++||+|+|||||++++..+++ +.
T Consensus 394 ~~~~lc~~~~~~~~---~-~~~~gdptE~Al~~~a~-~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~-~~ 467 (917)
T COG0474 394 LAAALCNSVTPEKN---G-WYQAGDPTEGALVEFAE-KLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGK-YI 467 (917)
T ss_pred HHHHhcCccccccc---C-ceecCCccHHHHHHHHH-hcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCc-EE
Confidence 55667877655432 2 67789999999999998 7776 5555666678899999999999999999854444 89
Q ss_pred EEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEe
Q 047874 481 THWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVG 560 (941)
Q Consensus 481 ~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~ 560 (941)
+++|||||.|+++|++. +...+++++.++.+.+..++++++|+||+++|||..+..+.....+..|+|++|+|+++
T Consensus 468 ~~~KGApe~il~~~~~~----~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g 543 (917)
T COG0474 468 LFVKGAPEVILERCKSI----GELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTG 543 (917)
T ss_pred EEEcCChHHHHHHhccc----CcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhh
Confidence 99999999999999976 66778899999999999999999999999999997765554433367899999999999
Q ss_pred ccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEE
Q 047874 561 LKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVM 640 (941)
Q Consensus 561 ~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ 640 (941)
++||||++++++|+.|++|||++||+|||+..||.+||++||+..+... ..+++|.+++.+.++++.+.++++.||
T Consensus 544 ~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~----~~vi~G~el~~l~~~el~~~~~~~~Vf 619 (917)
T COG0474 544 IEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAES----ALVIDGAELDALSDEELAELVEELSVF 619 (917)
T ss_pred ccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCc----eeEeehHHhhhcCHHHHHHHhhhCcEE
Confidence 9999999999999999999999999999999999999999998864210 569999999999999999999999999
Q ss_pred EecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHH
Q 047874 641 ARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYN 720 (941)
Q Consensus 641 ~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~ 720 (941)
||++|+||.++|+.+|++|++|+|+|||.||+||||+||||||||++|+|++|++||+++.++++..+..+++|||++|.
T Consensus 620 ARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ 699 (917)
T COG0474 620 ARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYV 699 (917)
T ss_pred EEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHH
Confidence 99999999999999999999999999999999999999999999988999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CchhHHHHHHHHhhhhHHHHHHhcccCCCCCccCCCCCCCCCCCccHHHH
Q 047874 721 NIQKFLQFQLTVNVAALVINFGAAVSSGK-VPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGRSKPLITKIMW 799 (941)
Q Consensus 721 ~i~~~i~~~l~~n~~~~~~~~~~~~~~~~-~~l~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~ 799 (941)
|+++++.|.+++|+..+++.+++.+++.+ .|++++|++|+|++++.+|+++++.++|+.+.|++||+++.++++++..+
T Consensus 700 ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~ 779 (917)
T COG0474 700 NIKKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIF 779 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHH
Confidence 99999999999999999999988888776 99999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHH-HHHHHhhcccCC-------ccccchhHHHHHHHHHHHHHHhhhccCCcccccc-cCcccHHHHH
Q 047874 800 RNLISQAIYQVAILL-TLQFKGRSILGV-------KESVKDTMIFNTFVLCQIFNEFNARKLEKKNIFK-GIHKNKLFLA 870 (941)
Q Consensus 800 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~-------~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~-~~~~n~~~~~ 870 (941)
..++....++..+++ +.+.+....+.. .....+|++|..++++|.++.+++|+. ..+++. .++.|+.+++
T Consensus 780 ~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~ 858 (917)
T COG0474 780 WRFILIIGLLSAILFILTFLLYLLGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSR-GRPFLSSLLFSNKYLWL 858 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhhcccccCHHHHH
Confidence 885555444433333 222221111111 145578999999999999999999984 456666 5789999999
Q ss_pred HHHHHHHHHHHHH--HHhh-hcccccCCChHHHHHHHHHHHHHH--HHHHHHHh
Q 047874 871 IIGITIALQLVMV--EFLK-TFADTERLNWGQWAACIGIAAMSW--PIGFLIKC 919 (941)
Q Consensus 871 ~~~~~~~~~~~~~--~~~~-~~f~~~~l~~~~~~~~~~~~~~~~--~~~~~~k~ 919 (941)
+++++.+++++.+ +... ..|+..+++...|+.++++..... ...+..+.
T Consensus 859 ~~~~~~~l~l~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (917)
T COG0474 859 ALLVIIILQLLIIFLPPLNLKIFQPTPLSLFEWLIAIAVALLLLYIVVSELYKL 912 (917)
T ss_pred HHHHHHHHHHHHHHhHHhHhhhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988888777664 3455 689999999888988877774443 33344443
No 8
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=4.4e-126 Score=1158.14 Aligned_cols=828 Identities=23% Similarity=0.320 Sum_probs=696.4
Q ss_pred CCHHHHHHHhCCCCCCCCCccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHhhhcccc---cC
Q 047874 18 GGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVCALLSLGFGIKQ---VG 94 (941)
Q Consensus 18 ~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f~~~~~~~lli~~~ls~~~~~~~---~~ 94 (941)
.+.+++++.|+++ .+|||++| +++|+++||+|+++.++++++|+.+++||++|+.++++++++++++.+... .+
T Consensus 30 ~~~~~v~~~l~~~-~~GLs~~e--a~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~ 106 (903)
T PRK15122 30 NSLEETLANLNTH-RQGLTEED--AAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRG 106 (903)
T ss_pred CCHHHHHHHhCCC-CCCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 4899999999999 58999988 999999999999999888899999999999999999999999999875321 12
Q ss_pred CcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEC------CEEeeeecCCcccCcEEEEcCCCe
Q 047874 95 LKEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRD------GRRRGLSIFDVVVGEVVCLKTGDQ 168 (941)
Q Consensus 95 ~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~------g~~~~i~~~~Lv~GDiI~l~~G~~ 168 (941)
....|.+++.++++++++.+++++++++.++..+++.+.. +.+++|+|| |++++|+++||+|||+|.+++||+
T Consensus 107 ~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~-~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~ 185 (903)
T PRK15122 107 EETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMV-RTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDM 185 (903)
T ss_pred ccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCE
Confidence 2236888888888899999999999999999999998664 568999999 488999999999999999999999
Q ss_pred eecceEEEecceEEEeeccCCCCCCceecCC----------------------CCCeEeeccEEeeeeEEEEEEEEcccC
Q 047874 169 IPADGLFLNGHSLKVDESSMTGESDRVEVDE----------------------KNPFLLSGTKVTAGYGFMLVTSVGMST 226 (941)
Q Consensus 169 iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~----------------------~~~~l~aGt~v~~g~~~~~V~~tG~~T 226 (941)
|||||++++|+++.||||+|||||.|+.|.+ .+|++|+||.+.+|.++++|++||.+|
T Consensus 186 IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T 265 (903)
T PRK15122 186 IPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRT 265 (903)
T ss_pred EeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEecccc
Confidence 9999999999988999999999999999974 136899999999999999999999999
Q ss_pred hhhHHHHhhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHH
Q 047874 227 AWGEMMSSISHELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINI 306 (941)
Q Consensus 227 ~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (941)
++||+.+.+.+ ...++|+++.++++..++..+++.++.+++++.. .... ++...
T Consensus 266 ~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~---~~~~----------------------~~~~~ 319 (903)
T PRK15122 266 YFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLING---FTKG----------------------DWLEA 319 (903)
T ss_pred HhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhh---hccC----------------------CHHHH
Confidence 99999998876 5667999999999998887766655544433321 1110 45677
Q ss_pred HHHHHHHHHHHcCCchhHHHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCccccc
Q 047874 307 IAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKS 386 (941)
Q Consensus 307 ~~~~i~ll~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~ 386 (941)
+.+++++++.+|||+||++++++++.++.+|+|+|+++|+++++|+||++|++|||||||||+|+|+|.+++..+.. .
T Consensus 320 l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~-~- 397 (903)
T PRK15122 320 LLFALAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGR-K- 397 (903)
T ss_pred HHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCC-C-
Confidence 88899999999999999999999999999999999999999999999999999999999999999999998743221 0
Q ss_pred ccchhhhhHHHHHHHHHHHhccCccccccCCCCCCccccCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCc
Q 047874 387 DACSLELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKR 466 (941)
Q Consensus 387 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~ 466 (941)
.+ +.+..+. +|+.. ....+||+|.|+++++. +.+.+ .....++.+.++||++.+|+
T Consensus 398 -------~~---~~l~~a~-l~s~~----------~~~~~~p~e~All~~a~-~~~~~--~~~~~~~~~~~~pF~s~~k~ 453 (903)
T PRK15122 398 -------DE---RVLQLAW-LNSFH----------QSGMKNLMDQAVVAFAE-GNPEI--VKPAGYRKVDELPFDFVRRR 453 (903)
T ss_pred -------hH---HHHHHHH-HhCCC----------CCCCCChHHHHHHHHHH-HcCch--hhhhcCceEEEeeeCCCcCE
Confidence 01 2232222 22211 01268999999999987 44432 12345678899999999999
Q ss_pred EEEEEEecCCceEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeecccccccc-ch
Q 047874 467 SGVLMKRINEKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQ-VQ 545 (941)
Q Consensus 467 ~sviv~~~~~~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~-~~ 545 (941)
|+++++..++ ++++++||+||.++++|++... +|...+++++.++++.+..++++.+|+|++++||++++..+.. ..
T Consensus 454 ms~v~~~~~~-~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~ 531 (903)
T PRK15122 454 LSVVVEDAQG-QHLLICKGAVEEMLAVATHVRD-GDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQY 531 (903)
T ss_pred EEEEEEcCCC-cEEEEECCcHHHHHHhchhhhc-CCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCcccccccc
Confidence 9999876444 4779999999999999997653 6677788998899999999999999999999999987553221 11
Q ss_pred hhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccC
Q 047874 546 EKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSL 625 (941)
Q Consensus 546 ~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~ 625 (941)
.+..|+|++|+|+++++||+|++++++|++|+++||+++|+|||++.||.++|+++||.. ..+++|.+++.+
T Consensus 532 ~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--------~~vi~G~el~~~ 603 (903)
T PRK15122 532 STADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--------GEPLLGTEIEAM 603 (903)
T ss_pred ccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--------CCccchHhhhhC
Confidence 223578999999999999999999999999999999999999999999999999999963 358999999999
Q ss_pred CHHHHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCc
Q 047874 626 SAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNF 705 (941)
Q Consensus 626 ~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~ 705 (941)
+++++.+..++..+|||++|+||.++|+.+|++|++|+|+|||.||+|||++|||||||| +|+|+||++||+++.+|+|
T Consensus 604 ~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~f 682 (903)
T PRK15122 604 DDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLEKSL 682 (903)
T ss_pred CHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeC-cccHHHHHhcCEEEecCCh
Confidence 999999999999999999999999999999999999999999999999999999999999 8999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhHHHHHHhcccCCCCCccCCC
Q 047874 706 SSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKP 785 (941)
Q Consensus 706 ~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~ 785 (941)
+.+++++++||++|+|+++++.|.++.|+..++..++..++..+.|++|.|++|+|+++|. |+++++.|+|++++| +|
T Consensus 683 ~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~nli~D~-~~lal~~d~~~~~~m-~~ 760 (903)
T PRK15122 683 MVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNLMYDI-SQLSLPWDKMDKEFL-RK 760 (903)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH-HHHhhcCCCCCHhhc-CC
Confidence 9999999999999999999999999999988887777777766789999999999999995 899999999999999 99
Q ss_pred CCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcc--ccchhHHHHHHHHHHHHHHhhhccCCcccccccCc
Q 047874 786 PVGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGVKE--SVKDTMIFNTFVLCQIFNEFNARKLEKKNIFKGIH 863 (941)
Q Consensus 786 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~ 863 (941)
|++++.+++++.++...+..+++....+++ +++... .+... ...+|..|.+++++|+++.+++|+. +.++|
T Consensus 761 P~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~t~~f~~l~~~q~~~~~~~R~~-~~~~~---- 833 (903)
T PRK15122 761 PRKWDAKNIGRFMLWIGPTSSIFDITTFAL-MWFVFA-ANSVEMQALFQSGWFIEGLLSQTLVVHMLRTQ-KIPFI---- 833 (903)
T ss_pred CCCCChhhhHHHHHHHHHHHHHHHHHHHHH-HHHHhc-cCcHhhhhhhHHHHHHHHHHHHHHHHHhhCcC-CCCcC----
Confidence 999999999997775444433333332222 222111 11111 1345788999999999999999984 33444
Q ss_pred ccHHHHHHHHHHHHHHHHH--HHH--hhhcccccCCChHHHHHHHHHHHHHHHHHHHHHhcc
Q 047874 864 KNKLFLAIIGITIALQLVM--VEF--LKTFADTERLNWGQWAACIGIAAMSWPIGFLIKCIP 921 (941)
Q Consensus 864 ~n~~~~~~~~~~~~~~~~~--~~~--~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~~ 921 (941)
+|++.+.+++++++++++. +++ ++.+|++.|+++.+|++++++++..+++.|+.|.+.
T Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~ 895 (903)
T PRK15122 834 QSTAALPVLLTTGLIMAIGIYIPFSPLGAMVGLEPLPWSYFPWLAATLLGYCLVAQGMKRFY 895 (903)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555555555555443 454 789999999999999999999999999999888543
No 9
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=1.7e-125 Score=1150.64 Aligned_cols=824 Identities=23% Similarity=0.316 Sum_probs=685.1
Q ss_pred hhHHhhhC--CHHHHHHHhCCCCCCCCCccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHhhh
Q 047874 11 FESLSNLG--GVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVCALLSLGF 88 (941)
Q Consensus 11 ~~~~~~~~--~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f~~~~~~~lli~~~ls~~~ 88 (941)
-+.+.++. +.+++++.|+++. +|||++| +++|+++||+|+++.++++++|+.++++|++|++++++++++++++.
T Consensus 43 ~~~~~~~~~~~~~~v~~~l~~~~-~GLs~~e--a~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~ 119 (902)
T PRK10517 43 SARCLKAAVMPEEELWKTFDTHP-EGLNEAE--VESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYAT 119 (902)
T ss_pred HHHHHHHHcCCHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 33444444 8999999999986 6999987 99999999999999998889999999999999999999999999887
Q ss_pred cccccCCcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEC------CEEeeeecCCcccCcEEE
Q 047874 89 GIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRD------GRRRGLSIFDVVVGEVVC 162 (941)
Q Consensus 89 ~~~~~~~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~------g~~~~i~~~~Lv~GDiI~ 162 (941)
+ .|.++..++++++++.+++.++++++++..++|.+.. +.+++|+|| |++++|+++||||||+|.
T Consensus 120 ~--------~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~-~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~ 190 (902)
T PRK10517 120 E--------DLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMV-SNTATVLRVINDKGENGWLEIPIDQLVPGDIIK 190 (902)
T ss_pred c--------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECCccCCCCeEEEEEHHhCCCCCEEE
Confidence 5 6888888888888999999999999999999998764 568999999 789999999999999999
Q ss_pred EcCCCeeecceEEEecceEEEeeccCCCCCCceecCCCC------------CeEeeccEEeeeeEEEEEEEEcccChhhH
Q 047874 163 LKTGDQIPADGLFLNGHSLKVDESSMTGESDRVEVDEKN------------PFLLSGTKVTAGYGFMLVTSVGMSTAWGE 230 (941)
Q Consensus 163 l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~------------~~l~aGt~v~~g~~~~~V~~tG~~T~~g~ 230 (941)
+++||+|||||+|++|+++.||||+|||||.|+.|.+++ |++|+||.+.+|.+.++|++||.+|++|+
T Consensus 191 l~~Gd~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~Gk 270 (902)
T PRK10517 191 LAAGDMIPADLRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQ 270 (902)
T ss_pred ECCCCEEeeeEEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHH
Confidence 999999999999999998899999999999999997543 57999999999999999999999999999
Q ss_pred HHHhhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHH
Q 047874 231 MMSSISHELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAA 310 (941)
Q Consensus 231 i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (941)
+.+.+.++..+++|+++.++++++++..+++.++.++++++. +.+. ++...+..+
T Consensus 271 I~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~---~~~~----------------------~~~~~l~~a 325 (902)
T PRK10517 271 LAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLING---YTKG----------------------DWWEAALFA 325 (902)
T ss_pred HHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHH---HhcC----------------------CHHHHHHHH
Confidence 999998888889999999999999988877776665554422 1110 355678889
Q ss_pred HHHHHHHcCCchhHHHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccccch
Q 047874 311 VTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACS 390 (941)
Q Consensus 311 i~ll~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~ 390 (941)
+++++.+|||+||++++++++.++.+|+|+|+++|+++++|+||++|++|||||||||+|+|+|.+++.... .+
T Consensus 326 lsv~V~~~Pe~LP~~vt~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~~---~~--- 399 (902)
T PRK10517 326 LSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISG---KT--- 399 (902)
T ss_pred HHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCCC---CC---
Confidence 999999999999999999999999999999999999999999999999999999999999999998742111 00
Q ss_pred hhhhHHHHHHHHHHHhccCccccccCCCCCCccccCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEEEE
Q 047874 391 LELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVL 470 (941)
Q Consensus 391 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~svi 470 (941)
. .+.+..+. +|+... ...+||+|.|+++++. ..+ .....+.++.+.++||+|++|+|+++
T Consensus 400 ---~---~~ll~~a~-l~~~~~----------~~~~~p~d~All~~a~-~~~--~~~~~~~~~~~~~~pFds~~k~msvv 459 (902)
T PRK10517 400 ---S---ERVLHSAW-LNSHYQ----------TGLKNLLDTAVLEGVD-EES--ARSLASRWQKIDEIPFDFERRRMSVV 459 (902)
T ss_pred ---H---HHHHHHHH-hcCCcC----------CCCCCHHHHHHHHHHH-hcc--hhhhhhcCceEEEeeeCCCcceEEEE
Confidence 0 12233222 232210 1258999999999886 322 11223456778899999999999999
Q ss_pred EEecCCceEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccchhhhhc
Q 047874 471 MKRINEKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEE 550 (941)
Q Consensus 471 v~~~~~~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e 550 (941)
++..++ .+.+++||+||.++++|++... +|...+++++.++.+.+..++++++|+|++++||++++..+.. .....|
T Consensus 460 v~~~~~-~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~-~~~~~e 536 (902)
T PRK10517 460 VAENTE-HHQLICKGALEEILNVCSQVRH-NGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGD-YQRADE 536 (902)
T ss_pred EEECCC-eEEEEEeCchHHHHHhchhhhc-CCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCccccc-cccccc
Confidence 876444 4678999999999999997754 5667788988888999999999999999999999987553321 112237
Q ss_pred cCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHH
Q 047874 551 TGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEER 630 (941)
Q Consensus 551 ~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~ 630 (941)
+|++|+|+++++||+||+++++|++|+++||+++|+|||++.||.++|+++||.. ..+++|.+++.++++++
T Consensus 537 ~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~--------~~v~~G~el~~l~~~el 608 (902)
T PRK10517 537 SDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA--------GEVLIGSDIETLSDDEL 608 (902)
T ss_pred cCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc--------cCceeHHHHHhCCHHHH
Confidence 8999999999999999999999999999999999999999999999999999953 36899999999999999
Q ss_pred HHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHH
Q 047874 631 IAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVT 710 (941)
Q Consensus 631 ~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~ 710 (941)
.+.+++..+|+|++|+||.++|+.+|++|++|+|+|||.||+|||++|||||||| +|+|+||++||+++.++++..+++
T Consensus 609 ~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~ 687 (902)
T PRK10517 609 ANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEE 687 (902)
T ss_pred HHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhHHHHHHhcccCCCCCccCCCCCCCC
Q 047874 711 VLRWGRCVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGRS 790 (941)
Q Consensus 711 ~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~ 790 (941)
++++||++|+|++|++.|.++.|+..++..+++.++..+.|++|.|++|+|+++| +|++++++|+|++++|++||+. +
T Consensus 688 ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D-~~~~al~~d~~~~~~m~~p~r~-~ 765 (902)
T PRK10517 688 GVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYD-VSQVAIPFDNVDDEQIQKPQRW-N 765 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH-HhHHhhcCCCCChhhhcCCCCC-C
Confidence 9999999999999999999999999888888777776568999999999999999 6899999999999999999872 3
Q ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCc-c---ccchhHHHHHHHHHHHHHHhhhccCCcccccccCcccH
Q 047874 791 KPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGVK-E---SVKDTMIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNK 866 (941)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~ 866 (941)
...+ .+.+...+.+.+++.+..++.....++.. . ...++..|..++++|+++.+++|+. +.+ +|+|+
T Consensus 766 ~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~q~~~~~~~R~~-~~~----~~~~~ 836 (902)
T PRK10517 766 PADL----GRFMVFFGPISSIFDILTFCLMWWVFHANTPETQTLFQSGWFVVGLLSQTLIVHMIRTR-RIP----FIQSR 836 (902)
T ss_pred HHHH----HHHHHHHHHHHHHHHHHHHHHHHHHccccchhhHhHHHHHHHHHHHHHHHHHHHhhccC-CCC----cccch
Confidence 2223 33333334433322222121111111211 1 1244566999999999999999984 233 44677
Q ss_pred HHHHHHHHHHHHHHHH--HH--HhhhcccccCCC--hHHHHHHHHHHHHHHHHHHHHHhccc
Q 047874 867 LFLAIIGITIALQLVM--VE--FLKTFADTERLN--WGQWAACIGIAAMSWPIGFLIKCIPV 922 (941)
Q Consensus 867 ~~~~~~~~~~~~~~~~--~~--~~~~~f~~~~l~--~~~~~~~~~~~~~~~~~~~~~k~~~~ 922 (941)
+.+.+++.+++++++. +| +++.+|++.+++ +..|++++++++. ++.|+.|.+..
T Consensus 837 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~e~~K~~~~ 896 (902)
T PRK10517 837 AAWPLMIMTLIVMAVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYM--TLTQLVKGFYS 896 (902)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHhhCCcCCChhHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 7776666666655443 44 578899999999 5667666666655 56777776543
No 10
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=8e-125 Score=1146.83 Aligned_cols=827 Identities=24% Similarity=0.325 Sum_probs=688.5
Q ss_pred ccCChhHHhhh--CCHHHHHHHhCCCCCCCCCccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHH
Q 047874 7 KEKSFESLSNL--GGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVCALL 84 (941)
Q Consensus 7 ~~~~~~~~~~~--~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f~~~~~~~lli~~~l 84 (941)
+.|+++.+.+. .++|++++.|+++. +|||++| +++|+++||+|+++.++++++|+.++++|++|+++++++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~l~~~~-~GLs~~e--v~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~l 81 (867)
T TIGR01524 5 VKKQGNNLLKESQMGKETLLRKLGVHE-TGLTNVE--VTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGV 81 (867)
T ss_pred CchHHHHHHHHHhCCHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHH
Confidence 34444455443 38999999999985 7999987 9999999999999998888999999999999999999999999
Q ss_pred HhhhcccccCCcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEE------CCEEeeeecCCcccC
Q 047874 85 SLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVR------DGRRRGLSIFDVVVG 158 (941)
Q Consensus 85 s~~~~~~~~~~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R------~g~~~~i~~~~Lv~G 158 (941)
+++.+ .|++++.++++++++.+++.+++++.++..+++.+.. +.+++|+| ||++++|+++||+||
T Consensus 82 s~~~~--------~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~-~~~~~V~R~~~~~~dg~~~~I~~~eLv~G 152 (867)
T TIGR01524 82 SYLTD--------DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMV-KNTATVLRVINENGNGSMDEVPIDALVPG 152 (867)
T ss_pred HHHHh--------hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhc-cCeeEEEEecccCCCCeEEEEEhhcCCCC
Confidence 98775 6888888888888999999999999999999998654 46899999 999999999999999
Q ss_pred cEEEEcCCCeeecceEEEecceEEEeeccCCCCCCceecCCCC------------CeEeeccEEeeeeEEEEEEEEcccC
Q 047874 159 EVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESDRVEVDEKN------------PFLLSGTKVTAGYGFMLVTSVGMST 226 (941)
Q Consensus 159 DiI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~------------~~l~aGt~v~~g~~~~~V~~tG~~T 226 (941)
|+|.+++||+|||||++++|+++.||||+|||||.|+.|.+++ |++|+||.+.+|.++++|++||.+|
T Consensus 153 DiV~l~~Gd~VPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T 232 (867)
T TIGR01524 153 DLIELAAGDIIPADARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSST 232 (867)
T ss_pred CEEEECCCCEEcccEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCcc
Confidence 9999999999999999999998899999999999999998643 5799999999999999999999999
Q ss_pred hhhHHHHhhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHH
Q 047874 227 AWGEMMSSISHELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINI 306 (941)
Q Consensus 227 ~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (941)
++||+.+.+.+ ..+++|+++.++++++++..+++.++.++++++. +.+. ++...
T Consensus 233 ~~gki~~~v~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~---~~~~----------------------~~~~~ 286 (867)
T TIGR01524 233 WFGSLAIAATE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMING---LMKG----------------------DWLEA 286 (867)
T ss_pred HHHHHHHHhhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHH---HhcC----------------------CHHHH
Confidence 99999999877 6678999999999999998887777666554432 1110 35567
Q ss_pred HHHHHHHHHHHcCCchhHHHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCccccc
Q 047874 307 IAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKS 386 (941)
Q Consensus 307 ~~~~i~ll~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~ 386 (941)
+..++++++.+|||+||++++++++.++++|+|+|+++|+++++|+||++|++|||||||||+|+|+|.+++..... .
T Consensus 287 ~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~~-~- 364 (867)
T TIGR01524 287 FLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSGE-T- 364 (867)
T ss_pred HHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCCC-C-
Confidence 88899999999999999999999999999999999999999999999999999999999999999999997632210 0
Q ss_pred ccchhhhhHHHHHHHHHHHhccCccccccCCCCCCccccCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCc
Q 047874 387 DACSLELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKR 466 (941)
Q Consensus 387 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~ 466 (941)
..+.+..+ ++|+.. + ..++||+|.|+++++. +.. ....+..++..+.+||+|++|+
T Consensus 365 ----------~~~~l~~a-~l~~~~-----~-----~~~~~p~~~Al~~~~~-~~~--~~~~~~~~~~~~~~pF~s~~k~ 420 (867)
T TIGR01524 365 ----------SERVLKMA-WLNSYF-----Q-----TGWKNVLDHAVLAKLD-ESA--ARQTASRWKKVDEIPFDFDRRR 420 (867)
T ss_pred ----------HHHHHHHH-HHhCCC-----C-----CCCCChHHHHHHHHHH-hhc--hhhHhhcCceEEEeccCCCcCE
Confidence 11223222 223211 0 1256999999999887 321 1222345678889999999999
Q ss_pred EEEEEEecCCceEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccchh
Q 047874 467 SGVLMKRINEKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQE 546 (941)
Q Consensus 467 ~sviv~~~~~~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~ 546 (941)
|++++++.++ .+++++||+||.++++|+++.. +|...+++++.++++++..++++++|+|++++|||+++..+.+ ..
T Consensus 421 ms~~v~~~~~-~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~-~~ 497 (867)
T TIGR01524 421 LSVVVENRAE-VTRLICKGAVEEMLTVCTHKRF-GGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEAD-FT 497 (867)
T ss_pred EEEEEEcCCc-eEEEEEeCcHHHHHHhchhhhc-CCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCccccc-cc
Confidence 9999876443 4678999999999999987654 6677788888888999999999999999999999987654322 11
Q ss_pred hhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCC
Q 047874 547 KLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLS 626 (941)
Q Consensus 547 ~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~ 626 (941)
...|+|++|+|+++++||+|++++++|++|+++||+++|+|||++.+|.++|+++||.. ..+++|.+++.++
T Consensus 498 ~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--------~~v~~g~~l~~~~ 569 (867)
T TIGR01524 498 KTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--------NDFLLGADIEELS 569 (867)
T ss_pred ccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC--------CCeeecHhhhhCC
Confidence 12378999999999999999999999999999999999999999999999999999964 3589999999999
Q ss_pred HHHHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCch
Q 047874 627 AEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFS 706 (941)
Q Consensus 627 ~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~ 706 (941)
++++.+..++..+|+|++|+||.++|+.+|++|++|+|+|||.||+|||++|||||||| +|+|+||++||+++.+++|+
T Consensus 570 ~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~~~ 648 (867)
T TIGR01524 570 DEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLM 648 (867)
T ss_pred HHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCChH
Confidence 99999999999999999999999999999999999999999999999999999999999 89999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhHHHHHHhcccCCCCCccCCCC
Q 047874 707 SVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPP 786 (941)
Q Consensus 707 ~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~p 786 (941)
.+++++++||++|+|+++++.|.++.|+..++..+++.++..+.|++|+|++|+|+++| +|++++++|+|++++|++||
T Consensus 649 ~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d-~~~~al~~~~~~~~~m~~p~ 727 (867)
T TIGR01524 649 VLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD-FSQLTLPWDKMDREFLKKPH 727 (867)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-HHHHhhcCCCCChHhhCCCC
Confidence 99999999999999999999999999999888877777776678999999999999999 79999999999999998666
Q ss_pred CCCCCCCccHHHHHHHHHHHHHHHHHH---HHHHHHhhcccCC-ccccchhHHHHHHHHHHHHHHhhhccCCcccccccC
Q 047874 787 VGRSKPLITKIMWRNLISQAIYQVAIL---LTLQFKGRSILGV-KESVKDTMIFNTFVLCQIFNEFNARKLEKKNIFKGI 862 (941)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~ 862 (941)
+ ++++.+.+. +...+++.+++. +.+++......+. .....+|..|.+++++|+++.+++|+. +.+ +
T Consensus 728 ~-~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~R~~-~~~----~ 797 (867)
T TIGR01524 728 Q-WEQKGMGRF----MLCIGPVSSIFDIATFLLMWFVFSANTVEEQALFQSGWFVVGLLSQTLVVHMIRTE-KIP----F 797 (867)
T ss_pred C-CChhhHHHH----HHHHHHHHHHHHHHHHHHHHHHhcccchhhhhHHHHHHHHHHHHHHHHHHHhhCcC-CCC----c
Confidence 5 666444333 333444332222 2121111100000 122347889999999999999999984 233 4
Q ss_pred cccHHHHHHHHHHHHHHHHHH--HH--hhhcccccCCCh--HHHHHHHHHHHHHHHHHHHHHhccc
Q 047874 863 HKNKLFLAIIGITIALQLVMV--EF--LKTFADTERLNW--GQWAACIGIAAMSWPIGFLIKCIPV 922 (941)
Q Consensus 863 ~~n~~~~~~~~~~~~~~~~~~--~~--~~~~f~~~~l~~--~~~~~~~~~~~~~~~~~~~~k~~~~ 922 (941)
|+|++.+.+++++++++++.+ ++ ++.+|++.++|+ ..|++++++++. ++.|+.|++..
T Consensus 798 ~~n~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~--~~~e~~k~~~~ 861 (867)
T TIGR01524 798 IQSRAAAPVMIATLLVMALGIIIPFSPLGHSIGLVSLPLSYFPWLIAILVGYM--ATMQLVKTFYI 861 (867)
T ss_pred CcchHHHHHHHHHHHHHHHHHHhchhhhhhhhccccCCccHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 568888888887777776554 33 378999998854 566666665554 66788886543
No 11
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=9.5e-125 Score=1156.30 Aligned_cols=834 Identities=31% Similarity=0.458 Sum_probs=711.7
Q ss_pred HHHHhhHHHHHHHHHHHHHHhhhcccccCC--cCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEE
Q 047874 66 VFEAFKDTTIIILLVCALLSLGFGIKQVGL--KEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVR 143 (941)
Q Consensus 66 l~~~f~~~~~~~lli~~~ls~~~~~~~~~~--~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R 143 (941)
+++||++|++++|++++++|+++++.+.+. ...|+++..++++++++.+++.++++++++..+++.+. .+.+++|+|
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~-~~~~~~ViR 79 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEY-ESEHAKVLR 79 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCceEEEE
Confidence 478999999999999999999987654222 24799999999999999999999999999999999865 567899999
Q ss_pred CCEEeeeecCCcccCcEEEEcCCCeeecceEEEecceEEEeeccCCCCCCceecCCC------------CCeEeeccEEe
Q 047874 144 DGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESDRVEVDEK------------NPFLLSGTKVT 211 (941)
Q Consensus 144 ~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~------------~~~l~aGt~v~ 211 (941)
||++++|+++||||||+|.+++||+|||||++++|+++.||||+|||||.|+.|.++ ++++|+||.+.
T Consensus 80 dg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~ 159 (917)
T TIGR01116 80 DGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVV 159 (917)
T ss_pred CCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEe
Confidence 999999999999999999999999999999999998789999999999999999753 37899999999
Q ss_pred eeeEEEEEEEEcccChhhHHHHhhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccC
Q 047874 212 AGYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVG 291 (941)
Q Consensus 212 ~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (941)
+|++.++|++||.+|++||+.+++...+.+++|+++++++++.++..+.++++++++++++.++. .... ..
T Consensus 160 ~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~-~~~~----~~---- 230 (917)
T TIGR01116 160 AGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFN-DPAL----GG---- 230 (917)
T ss_pred cceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccc----cc----
Confidence 99999999999999999999999988888899999999999999888777766665554332221 1000 00
Q ss_pred CccccccchhhHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCc
Q 047874 292 GKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQ 371 (941)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~ 371 (941)
++...+...+..++++++++||++||++++++++.++++|+++++++|+++++|+||++|++|||||||||+|+
T Consensus 231 ------~~~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~ 304 (917)
T TIGR01116 231 ------GWIQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQ 304 (917)
T ss_pred ------hhHHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCe
Confidence 11124556677788999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEeCCcc-------------cccccch-h------hhhHHHHHHHHHHHhccCccccccCCCCCCccccCCccHH
Q 047874 372 MKVTEFWLGKEA-------------MKSDACS-L------ELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEK 431 (941)
Q Consensus 372 ~~v~~~~~~~~~-------------~~~~~~~-~------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~ 431 (941)
|+|.+++..+.. +.+.... . ...+...+.+..+.++|+++.....+........|||+|.
T Consensus 305 m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ 384 (917)
T TIGR01116 305 MSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEA 384 (917)
T ss_pred EEEEEEEecCCcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHH
Confidence 999999876521 1110000 0 0011223445556678887665432222223346899999
Q ss_pred HHHHHHHHhcCCCCcCc----------------ccccceeEEeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHhhcc
Q 047874 432 AILSWAMIDLGMNVDEP----------------KQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCS 495 (941)
Q Consensus 432 al~~~~~~~~~~~~~~~----------------~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~c~ 495 (941)
|+++++. +.|.+.... ++.+++++++||+|+||||+++++.. +++.+|+|||||.|+++|+
T Consensus 385 ALl~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~--~~~~~~~KGApe~il~~c~ 461 (917)
T TIGR01116 385 ALKVLVE-KMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPS--TGNKLFVKGAPEGVLERCT 461 (917)
T ss_pred HHHHHHH-HcCCCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEeeC--CcEEEEEcCChHHHHHhcc
Confidence 9999998 777654321 34567899999999999999999864 3478999999999999999
Q ss_pred cccccCCeEeeCCHHHHHHHHHHHHHHHh-cccceeeeeeeccccccc------cchhhhhccCcEEEEEEeccCCCCcc
Q 047874 496 HYYVKSGTIRILDGEERTQIEKIIQEMAA-KSLRCIAFAHTKAAEADG------QVQEKLEETGLTLLGLVGLKDPCRPG 568 (941)
Q Consensus 496 ~~~~~~g~~~~l~~~~~~~~~~~~~~~~~-~g~r~l~~a~~~~~~~~~------~~~~~~~e~~l~~lG~i~~~d~~~~~ 568 (941)
+++.++|...+++++.++++++..+++++ +|+||+++|||.++.+.. ....+..|+|++|+|+++++||+|++
T Consensus 462 ~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~ 541 (917)
T TIGR01116 462 HILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPE 541 (917)
T ss_pred ceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchh
Confidence 88877788889999999999999999999 999999999998764321 11124468999999999999999999
Q ss_pred hHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHH
Q 047874 569 VRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDK 648 (941)
Q Consensus 569 ~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 648 (941)
++++|++|+++||+++|+|||+..+|.++|+++|+..++.. .....++|.+++.+.+++......+..||||++|+||
T Consensus 542 v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~--v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K 619 (917)
T TIGR01116 542 VADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDED--VTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHK 619 (917)
T ss_pred HHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCcc--ccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHH
Confidence 99999999999999999999999999999999999764321 1235789999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHH
Q 047874 649 LLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQF 728 (941)
Q Consensus 649 ~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~ 728 (941)
.++|+.+|+.|++|+|+|||.||+|||++|||||||| +|++.++++||+++.+|+|..+.+++++||++|+|+++++.|
T Consensus 620 ~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~ 698 (917)
T TIGR01116 620 SELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRY 698 (917)
T ss_pred HHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhHHHHHHhcccCCCCCccCCCCCCCCCCCccHHHHHHHHHHHHH
Q 047874 729 QLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGRSKPLITKIMWRNLISQAIY 808 (941)
Q Consensus 729 ~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 808 (941)
.+++|+..+++.+++.+++.+.|++++|++|+|++++.+|+++++.++|++++|++||+.++++++++.++..+++.+++
T Consensus 699 ~l~~ni~~~~~~~~~~~~~~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~ 778 (917)
T TIGR01116 699 MISSNIGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVY 778 (917)
T ss_pred HHhccHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHH
Confidence 99999999999999888888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccCC-----------------------ccccchhHHHHHHHHHHHHHHhhhccCCcccccc-cCcc
Q 047874 809 QVAILLTLQFKGRSILGV-----------------------KESVKDTMIFNTFVLCQIFNEFNARKLEKKNIFK-GIHK 864 (941)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~-----------------------~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~-~~~~ 864 (941)
++++.++.+++.....+. ....++|++|.+++++|++|.+++|+. +.++|+ ++|+
T Consensus 779 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~-~~~~~~~~~~~ 857 (917)
T TIGR01116 779 VGLATVGGFVWWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSE-DQSLLRMPPWV 857 (917)
T ss_pred HHHHHHHHHHHHHhhcCcccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCC-cccccccCCcc
Confidence 887654433321110010 134578999999999999999999995 567776 7899
Q ss_pred cHHHHHHHHHHHHHHHHH--HHHhhhcccccCCChHHHHHHHHHHHHHHHHHHHHHhccc
Q 047874 865 NKLFLAIIGITIALQLVM--VEFLKTFADTERLNWGQWAACIGIAAMSWPIGFLIKCIPV 922 (941)
Q Consensus 865 n~~~~~~~~~~~~~~~~~--~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~~~ 922 (941)
|+++++++++++++++++ +++++.+|++.|+++.+|+++++++++.+++.|++|++.|
T Consensus 858 n~~~~~~~~~~~~l~~~~~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 858 NKWLIGAICLSMALHFLILYVPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred CHHHHHHHHHHHHHHHHHHHhHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999988877 6778999999999999999999999999999999998763
No 12
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.2e-120 Score=1003.08 Aligned_cols=876 Identities=26% Similarity=0.391 Sum_probs=744.2
Q ss_pred hhCCHHHHHHHhCCCCCCCCCccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHhhhccccc--
Q 047874 16 NLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVCALLSLGFGIKQV-- 93 (941)
Q Consensus 16 ~~~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f~~~~~~~lli~~~ls~~~~~~~~-- 93 (941)
|.-+++|+++++++|..+|||..+ +.+++++-|+|.+++++..+-|..+.+|+.+.+.++++++++++++.+....
T Consensus 40 H~~~~~eL~~r~~t~~~~Glt~~~--A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~ 117 (1019)
T KOG0203|consen 40 HKLSVDELCERYGTSVSQGLTSQE--AAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAILCFVAYGIQAST 117 (1019)
T ss_pred ccCCHHHHHHHhcCChhhcccHHH--HHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhccc
Confidence 456999999999999999999977 9999999999999999888889989999999999999999999976543211
Q ss_pred ---CCcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCEEeeeecCCcccCcEEEEcCCCeee
Q 047874 94 ---GLKEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIP 170 (941)
Q Consensus 94 ---~~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~G~~iP 170 (941)
....+.+-+..+...+++..+.+.+++.+..+-.+..+++ .+..++|+|||+.+.+..+|||+||++.++-||+||
T Consensus 118 ~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l-~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~GdrVP 196 (1019)
T KOG0203|consen 118 EDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNL-VPQQALVIRDGEKMTINAEELVVGDLVEVKGGDRVP 196 (1019)
T ss_pred CCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhcc-chhhheeeecceeEEechhhcccccceeeccCCccc
Confidence 1112233333222233333344455555555555666654 467899999999999999999999999999999999
Q ss_pred cceEEEecceEEEeeccCCCCCCceecCC---------CCCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhcccCCC
Q 047874 171 ADGLFLNGHSLKVDESSMTGESDRVEVDE---------KNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNE 241 (941)
Q Consensus 171 aD~~ll~g~~l~Vdes~LTGEs~pv~k~~---------~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~ 241 (941)
||.|++++.++++|+|+|||||+|.++.+ ..|+-|.+|.+.+|.++++|++||.+|.+|++..........
T Consensus 197 ADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~~~~~ 276 (1019)
T KOG0203|consen 197 ADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLASGLEDG 276 (1019)
T ss_pred ceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhhccCCCC
Confidence 99999999999999999999999998763 457899999999999999999999999999999988887889
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHHHcCCc
Q 047874 242 ETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEG 321 (941)
Q Consensus 242 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~ 321 (941)
++|.++.++++..++...+++..+.+|++.+. .+. .+..++.+.++++++.+|++
T Consensus 277 ~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~---~gy----------------------~~l~avv~~i~iivAnvPeG 331 (1019)
T KOG0203|consen 277 KTPIAKEIEHFIHIITGVAIFLGISFFILALI---LGY----------------------EWLRAVVFLIGIIVANVPEG 331 (1019)
T ss_pred CCcchhhhhchHHHHHHHHHHHHHHHHHHHHh---hcc----------------------hhHHHhhhhheeEEecCcCC
Confidence 99999999999999988888888877766432 121 46677777899999999999
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccccc------hhhhhH
Q 047874 322 LPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDAC------SLELAQ 395 (941)
Q Consensus 322 L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~------~~~~~~ 395 (941)
|+..++.++....+||+++++++||+++.|+||+.++||+|||||||+|+|+|.++|.++.....+.. .....+
T Consensus 332 L~~tvTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~ 411 (1019)
T KOG0203|consen 332 LLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSS 411 (1019)
T ss_pred ccceehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccC
Confidence 99999999999999999999999999999999999999999999999999999999998765443321 111223
Q ss_pred HHHHHHHHHHhccCccccccCCCCC---CccccCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEEEEEE
Q 047874 396 NLYELLQEAVGLNTTGNVYNSNSLS---TSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMK 472 (941)
Q Consensus 396 ~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~ 472 (941)
..+..+..+..+|+.+.....+..- .....|++.|.||++++..-++ +....++.++.+.++||+|.+|+.-.+.+
T Consensus 412 ~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~-~~~~~R~~~~kv~eipfNSt~Kyqlsih~ 490 (1019)
T KOG0203|consen 412 ATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILG-SVMELRERNPKVAEIPFNSTNKYQLSIHE 490 (1019)
T ss_pred chHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcc-hHHHHHHhhHHhhcCCcccccceEEEEEe
Confidence 4556677788889888776433322 3456899999999999974333 33556777888999999999999988876
Q ss_pred ecC--CceEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccch-----
Q 047874 473 RIN--EKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQ----- 545 (941)
Q Consensus 473 ~~~--~~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~----- 545 (941)
..+ +.++.+.+|||||.++++|+.+.. +|+..+++++.++.+++...++...|.||++|+++.++++.....
T Consensus 491 ~~d~~~~~~~l~mKGape~il~~CSTi~i-~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~ 569 (1019)
T KOG0203|consen 491 TEDPSDPRFLLVMKGAPERILDRCSTILI-NGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDT 569 (1019)
T ss_pred cCCCCCccceeeecCChHHHHhhccceee-cCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeec
Confidence 543 346788899999999999998776 888899999999999999999999999999999998876544332
Q ss_pred --hhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCC-------------
Q 047874 546 --EKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDL------------- 610 (941)
Q Consensus 546 --~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~------------- 610 (941)
.+..-.|+.|+|++++-||+|..+++++.+||.||||++|+|||++.||+++|++.||.......
T Consensus 570 d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~ 649 (1019)
T KOG0203|consen 570 DDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVE 649 (1019)
T ss_pred CCCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCccc
Confidence 22335689999999999999999999999999999999999999999999999999987643311
Q ss_pred -----CcccceecchhcccCCHHHHHHhhcCce--EEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEE
Q 047874 611 -----NKDEAVIEGVQFRSLSAEERIAKIESIR--VMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLS 683 (941)
Q Consensus 611 -----~~~~~~~~g~~~~~~~~~~~~~~~~~~~--v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIa 683 (941)
.....|++|.++.+++++++++.+.+.. ||||.||+||..||+..|++|..|+++|||.||+||||.||||||
T Consensus 650 ~vn~~~a~a~VihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVA 729 (1019)
T KOG0203|consen 650 QVNSRDAKAAVIHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVA 729 (1019)
T ss_pred ccCccccceEEEecccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhccccccee
Confidence 2356789999999999999999988764 999999999999999999999999999999999999999999999
Q ss_pred ecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhh
Q 047874 684 MGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLI 763 (941)
Q Consensus 684 m~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~ 763 (941)
||..|+|++|++||++++||+|++|+..++|||.+|+|+||.+.|.++.|+..+...+++.+++.|.|+.++++|.+++.
T Consensus 730 MGiaGSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLg 809 (1019)
T KOG0203|consen 730 MGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLG 809 (1019)
T ss_pred eccccchHHHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHhcccCCCCCccCCCCCC-CCCCCccHHHHH-HHHHHHHHHHHHHHHHHHHhhcccCC---------------
Q 047874 764 MDTLGALALATEQPTNDLMSKPPVG-RSKPLITKIMWR-NLISQAIYQVAILLTLQFKGRSILGV--------------- 826 (941)
Q Consensus 764 ~~~~~~~~l~~~~~~~~~~~~~p~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 826 (941)
+|+.|+++|++|+|+.|+|+|+|++ +++++++.+++. .+...+.++++..|+.||..+..-|.
T Consensus 810 TDmvPAiSLAYE~aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~ 889 (1019)
T KOG0203|consen 810 TDIVPAISLAYEKAESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDD 889 (1019)
T ss_pred cccchhhhHhccCchhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhh
Confidence 9999999999999999999999998 678888876544 44455777777766655443321111
Q ss_pred -----------c---------cccchhHHHHHHHHHHHHHHhhhccCCcccccccCcccHHHHHHHHHHHHHHHHH--HH
Q 047874 827 -----------K---------ESVKDTMIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVM--VE 884 (941)
Q Consensus 827 -----------~---------~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~ 884 (941)
. +.+.+|..|.+++++|+.+++.|++ ++.++|..-++||.+++++++..++..++ +|
T Consensus 890 ~~~Dl~DsyGQeWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KT-RRnSlfqqGmrN~vl~f~v~~e~~La~fl~y~p 968 (1019)
T KOG0203|consen 890 GVNDLTDSYGQEWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKT-RRNSIFQQGMRNKVLIFAVIFETCLACFLCYCP 968 (1019)
T ss_pred hhhhhhhhccccccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhc-chhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCc
Confidence 0 4567899999999999999999998 57888886699999999998766665554 45
Q ss_pred HhhhcccccCCChHHHHHHHHHHHHHHHHHHHHHhccc
Q 047874 885 FLKTFADTERLNWGQWAACIGIAAMSWPIGFLIKCIPV 922 (941)
Q Consensus 885 ~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~~~ 922 (941)
.....|++.|++|.+|+..++.++.+++.+|++|++.|
T Consensus 969 g~~~~l~~~pl~~~~wl~a~P~~ilIfvydE~Rk~~IR 1006 (1019)
T KOG0203|consen 969 GVLYALGMYPLKFQWWLVAFPFGILIFVYDEVRKLFIR 1006 (1019)
T ss_pred cHHHHhccCCCCcEEEEecccceeeeeeHHHHHhHhhh
Confidence 66788999999999999999999999999999999887
No 13
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=7.2e-114 Score=1038.03 Aligned_cols=744 Identities=24% Similarity=0.370 Sum_probs=626.2
Q ss_pred CCCccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHhhhcccccCCcCccchhHHHHHHHHHHH
Q 047874 34 GIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGSIIFAVFLVV 113 (941)
Q Consensus 34 GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f~~~~~~~lli~~~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~ 113 (941)
|||++| +++|+++||+|++++++ +++|+.++++|++|++++++++++++++.+ .|.++..+++.++++.
T Consensus 1 GLs~~e--a~~r~~~~G~N~~~~~~-~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~--------~~~~~~~i~~~~~i~~ 69 (755)
T TIGR01647 1 GLTSAE--AKKRLAKYGPNELPEKK-VSPLLKFLGFFWNPLSWVMEAAAIIAIALE--------NWVDFVIILGLLLLNA 69 (755)
T ss_pred CcCHHH--HHHHHHhcCCCCCCCCC-CCHHHHHHHHHhchHHHHHHHHHHHHHhhc--------chhhhhhhhhhhHHHH
Confidence 899888 99999999999999854 567899999999999999999999999886 6888888888888889
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCeEEEEECCEEeeeecCCcccCcEEEEcCCCeeecceEEEecceEEEeeccCCCCCC
Q 047874 114 SVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESD 193 (941)
Q Consensus 114 ~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~ 193 (941)
.+++++++++++..+++.+. .+.+++|+|||++++|+++||+|||+|.+++||+|||||++++|+++.||||+|||||.
T Consensus 70 ~i~~~qe~~a~~~~~~L~~~-~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~ 148 (755)
T TIGR01647 70 TIGFIEENKAGNAVEALKQS-LAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESL 148 (755)
T ss_pred HHHHHHHHHHHHHHHHHHhh-CCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCcc
Confidence 99999999999999999765 46789999999999999999999999999999999999999999877999999999999
Q ss_pred ceecCCCCCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 194 RVEVDEKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLI 273 (941)
Q Consensus 194 pv~k~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (941)
|+.|..+ +.+|+||.+.+|.+.++|++||.+|++|++.+.+.+++.+++|+++.+++++.++.++++.++++.+++++.
T Consensus 149 PV~K~~~-~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~ 227 (755)
T TIGR01647 149 PVTKKTG-DIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFF 227 (755)
T ss_pred ceEeccC-CeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999875 569999999999999999999999999999999988887889999999999999988877777666555322
Q ss_pred HHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHhhhhhhccCchhhhhc
Q 047874 274 RYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETM 353 (941)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~L 353 (941)
. .+. ++...+.+++++++++|||+||++++++++.++++|+|+|+++|+++++|+|
T Consensus 228 ~--~~~----------------------~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~l 283 (755)
T TIGR01647 228 G--RGE----------------------SFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEEL 283 (755)
T ss_pred H--cCC----------------------CHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhc
Confidence 0 111 4567788999999999999999999999999999999999999999999999
Q ss_pred cCeeEEEeCcccccccCceEEEEEEeCCcccccccchhhhhHHHHHHHHHHHhccCccccccCCCCCCccccCCccHHHH
Q 047874 354 GSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAI 433 (941)
Q Consensus 354 g~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al 433 (941)
|++|++|||||||||+|+|+|.+++..+..++. .+.+..+. +|+. ..++||+|.|+
T Consensus 284 g~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~-----------~~~l~~a~-~~~~------------~~~~~pi~~Ai 339 (755)
T TIGR01647 284 AGMDILCSDKTGTLTLNKLSIDEILPFFNGFDK-----------DDVLLYAA-LASR------------EEDQDAIDTAV 339 (755)
T ss_pred cCCcEEEecCCCccccCceEEEEEEecCCCCCH-----------HHHHHHHH-HhCC------------CCCCChHHHHH
Confidence 999999999999999999999999865421111 12233333 2221 12579999999
Q ss_pred HHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHH
Q 047874 434 LSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERT 513 (941)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~ 513 (941)
++++. +.+ ..+..+++.+..||++.+|+|+++++..++++.+.++||+||.++++|++. .+.++
T Consensus 340 ~~~~~-~~~----~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~-----------~~~~~ 403 (755)
T TIGR01647 340 LGSAK-DLK----EARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNK-----------KEIEE 403 (755)
T ss_pred HHHHH-HhH----HHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCc-----------HHHHH
Confidence 99886 322 123346778899999999999999886554556788999999999999742 34566
Q ss_pred HHHHHHHHHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHH
Q 047874 514 QIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHT 593 (941)
Q Consensus 514 ~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~ 593 (941)
++++..++++++|+|++++|+++ .|++++|+|+++++||+|++++++|++||++||+++|+|||++.+
T Consensus 404 ~~~~~~~~~~~~G~rvl~vA~~~------------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~t 471 (755)
T TIGR01647 404 KVEEKVDELASRGYRALGVARTD------------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAI 471 (755)
T ss_pred HHHHHHHHHHhCCCEEEEEEEEc------------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 78888899999999999999973 156899999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHH
Q 047874 594 ARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAP 673 (941)
Q Consensus 594 a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~ 673 (941)
|.++|+++||.... .....+.+|.+.+.++++++.+.+++..+|+|++|+||.++|+.+|++|++|+|+|||.||+|
T Consensus 472 A~~IA~~lGI~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDap 548 (755)
T TIGR01647 472 AKETARRLGLGTNI---YTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAP 548 (755)
T ss_pred HHHHHHHcCCCCCC---cCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHH
Confidence 99999999997521 112344566667788899999999999999999999999999999999999999999999999
Q ss_pred HHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchh
Q 047874 674 ALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLT 753 (941)
Q Consensus 674 ~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~ 753 (941)
||++|||||||| +|+|+|+++||+++.++++..+++++++||++++|+++++.|.++.|+..++..++..++.+ .|++
T Consensus 549 AL~~AdVGIAm~-~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~-~~l~ 626 (755)
T TIGR01647 549 ALKKADVGIAVA-GATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILN-FYFP 626 (755)
T ss_pred HHHhCCeeEEec-CCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC-cchh
Confidence 999999999999 89999999999999999999999999999999999999999999999988776666665444 4599
Q ss_pred HHHHHHHHhhhhHHHHHHhcccCCCCCccCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhc---c---cC--
Q 047874 754 AVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRS---I---LG-- 825 (941)
Q Consensus 754 ~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~-- 825 (941)
|+|++|+|+++|. |++++++|++++. ++| +...+ ..++..+...+.+.++..+.++++... + ++
T Consensus 627 ~~~il~~~l~~d~-~~~~l~~~~~~~~---~~p---~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 698 (755)
T TIGR01647 627 PIMVVIIAILNDG-TIMTIAYDNVKPS---KLP---QRWNL-REVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGLQ 698 (755)
T ss_pred HHHHHHHHHHHhH-hHhhccCCCCCCC---CCC---Cccch-HHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhccccc
Confidence 9999999999996 6999999998742 233 33333 366666677777776665555544331 1 11
Q ss_pred CccccchhHHHHHHHHHHHHHHhhhccCCcccccccCcccHHHHHHHHHHHHHHHHH
Q 047874 826 VKESVKDTMIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVM 882 (941)
Q Consensus 826 ~~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 882 (941)
.+..+.+|++|..+++.|.++.+++|+. ..+|.. ..+++++.+.++..++..++
T Consensus 699 ~~~~~~~t~~f~~~~~~~~~~~~~~r~~--~~~~~~-~p~~~l~~~~~~~~~~~~~~ 752 (755)
T TIGR01647 699 LLHGNLQSLIYLQVSISGQATIFVTRTH--GFFWSE-RPGKLLFIAFVIAQIIATFI 752 (755)
T ss_pred ccHhhhHHHHHHHHHHHHHHHHheeccC--CCCccc-CCcHHHHHHHHHHHHHHHHH
Confidence 1244689999999999999999999983 334432 35777777776666554443
No 14
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=1.4e-114 Score=1080.03 Aligned_cols=802 Identities=21% Similarity=0.294 Sum_probs=647.3
Q ss_pred CCCCCccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHhhhcccccCCcCccchhHHHHHHHHH
Q 047874 32 KGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGSIIFAVFL 111 (941)
Q Consensus 32 ~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f~~~~~~~lli~~~ls~~~~~~~~~~~~~~~~~~~i~~~l~~ 111 (941)
.+|||++| +++|+++||+|+++.++ +++++++++++.+|+++++++++++++... +|+++..+++++++
T Consensus 137 ~~GLs~~e--~~~r~~~yG~N~i~~~~-~s~~~ll~~~~~~p~~i~~i~~~~l~~~~~--------~~~~~~~i~~i~~~ 205 (1054)
T TIGR01657 137 SNGLTTGD--IAQRKAKYGKNEIEIPV-PSFLELLKEEVLHPFYVFQVFSVILWLLDE--------YYYYSLCIVFMSST 205 (1054)
T ss_pred ccCCCHHH--HHHHHHhcCCCeeecCC-CCHHHHHHHHHhchHHHHHHHHHHHHHhhh--------hHHHHHHHHHHHHH
Confidence 47999877 99999999999999864 799999999999999999988877766432 57788888877777
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCEEeeeecCCcccCcEEEEc--CCCeeecceEEEecceEEEeeccCC
Q 047874 112 VVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLK--TGDQIPADGLFLNGHSLKVDESSMT 189 (941)
Q Consensus 112 ~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~--~G~~iPaD~~ll~g~~l~Vdes~LT 189 (941)
+.+++.++++++.++.+++.. ++..++|+|||++++|+++||||||+|.++ +||+|||||+|++|+ +.||||+||
T Consensus 206 ~~~~~~~~~~k~~~~L~~~~~--~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~-~~VdES~LT 282 (1054)
T TIGR01657 206 SISLSVYQIRKQMQRLRDMVH--KPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS-CIVNESMLT 282 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHhhc--CCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc-EEEeccccc
Confidence 777777777777666666543 356899999999999999999999999999 999999999999996 599999999
Q ss_pred CCCCceecCC-----------------CCCeEeeccEEee-------eeEEEEEEEEcccChhhHHHHhhcccCCCCChh
Q 047874 190 GESDRVEVDE-----------------KNPFLLSGTKVTA-------GYGFMLVTSVGMSTAWGEMMSSISHELNEETPL 245 (941)
Q Consensus 190 GEs~pv~k~~-----------------~~~~l~aGt~v~~-------g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l 245 (941)
|||.|+.|.+ +++++|+||.+.+ |.+.++|++||.+|..|++.+++...+...+++
T Consensus 283 GES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~ 362 (1054)
T TIGR01657 283 GESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKF 362 (1054)
T ss_pred CCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCch
Confidence 9999999974 1357999999985 789999999999999999999998877788999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHHHcCCchhHH
Q 047874 246 QARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLA 325 (941)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~L~~~ 325 (941)
++...++...+..++++ .+++++....... .++...+..+++++++++|++||++
T Consensus 363 ~~~~~~~~~~l~~~a~i----~~i~~~~~~~~~~---------------------~~~~~~~l~~l~iiv~~vP~~LP~~ 417 (1054)
T TIGR01657 363 YKDSFKFILFLAVLALI----GFIYTIIELIKDG---------------------RPLGKIILRSLDIITIVVPPALPAE 417 (1054)
T ss_pred HHHHHHHHHHHHHHHHH----HHHHHHHHHHHcC---------------------CcHHHHHHHHHHHHHhhcCchHHHH
Confidence 88877776655433322 2222211111110 0466788899999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccccchhhhhHHHHHHHHHHH
Q 047874 326 VTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAV 405 (941)
Q Consensus 326 ~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 405 (941)
++++++.++.||+|++++||++.++|.+|++|++|||||||||+|+|+|.+++..+...................+..++
T Consensus 418 ~ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (1054)
T TIGR01657 418 LSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKAL 497 (1054)
T ss_pred HHHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998754321100000000001122344566
Q ss_pred hccCccccccCCCCCCccccCCccHHHHHHHHHHhcCCC----CcC----------cccccceeEEeCCCCCCCcEEEEE
Q 047874 406 GLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGMN----VDE----------PKQYCTVINVEAFNSEKKRSGVLM 471 (941)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~----~~~----------~~~~~~~l~~~~F~s~~k~~sviv 471 (941)
+.||+....+ ....|||+|.|+++++.+....+ ... ....+++++.+||+|++|||||++
T Consensus 498 a~C~~~~~~~------~~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv 571 (1054)
T TIGR01657 498 ATCHSLTKLE------GKLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIV 571 (1054)
T ss_pred HhCCeeEEEC------CEEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEE
Confidence 7787754331 14689999999999864322210 000 024678899999999999999999
Q ss_pred EecCCceEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccc----cchhh
Q 047874 472 KRINEKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADG----QVQEK 547 (941)
Q Consensus 472 ~~~~~~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~----~~~~~ 547 (941)
+..+++++++++|||||.|+++|++. ..++.+++..++++++|+||+++|||++++.+. ...++
T Consensus 572 ~~~~~~~~~~~~KGApE~Il~~c~~~------------~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~ 639 (1054)
T TIGR01657 572 STNDERSPDAFVKGAPETIQSLCSPE------------TVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRD 639 (1054)
T ss_pred EEcCCCeEEEEEECCHHHHHHHcCCc------------CCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHH
Confidence 98766678899999999999999842 124567888999999999999999999863221 12345
Q ss_pred hhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCC------------------
Q 047874 548 LEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVD------------------ 609 (941)
Q Consensus 548 ~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~------------------ 609 (941)
..|+|++|+|+++++||+|++++++|++|+++||+++|+|||++.||.++|+++||..++..
T Consensus 640 ~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~ 719 (1054)
T TIGR01657 640 AVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIK 719 (1054)
T ss_pred HHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEE
Confidence 67999999999999999999999999999999999999999999999999999999754310
Q ss_pred -----------------------------CCcccceecchhccc---CCHHHHHHhhcCceEEEecCHHHHHHHHHHHHh
Q 047874 610 -----------------------------LNKDEAVIEGVQFRS---LSAEERIAKIESIRVMARSSPLDKLLMVQSLKQ 657 (941)
Q Consensus 610 -----------------------------~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~ 657 (941)
......+++|++++. +.++++.+.+.+..||||++|+||.++|+.+|+
T Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~ 799 (1054)
T TIGR01657 720 FEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQK 799 (1054)
T ss_pred EEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHh
Confidence 001136888988765 455778888999999999999999999999999
Q ss_pred CCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 658 KGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVAAL 737 (941)
Q Consensus 658 ~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~ 737 (941)
.|+.|+|+|||+||+||||+|||||||| ++ | |..+||+++.++++++++++|++||+++.|+++.+.|.+.++++..
T Consensus 800 ~g~~V~m~GDG~ND~~ALK~AdVGIam~-~~-d-as~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~ 876 (1054)
T TIGR01657 800 LDYTVGMCGDGANDCGALKQADVGISLS-EA-E-ASVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQF 876 (1054)
T ss_pred CCCeEEEEeCChHHHHHHHhcCcceeec-cc-c-ceeecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998 33 3 4588999999999999999999999999999999999999998875
Q ss_pred HHHHHHHHhcCCCchhHHHHHHHHhhhhHHHHHHhcccCCCCCccCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Q 047874 738 VINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQ 817 (941)
Q Consensus 738 ~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (941)
+..++ ++..+.|++++|++|+|++++.+++++|+.++|++++|++|| ..+++++.++..++.+++++.++.+..+
T Consensus 877 ~~~~~--l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~P---~~~l~~~~~~~si~~q~~i~~~~~~~~~ 951 (1054)
T TIGR01657 877 YSVSI--LYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKERP---PSNLFSVYILTSVLIQFVLHILSQVYLV 951 (1054)
T ss_pred HHHHH--HHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCCC---CccccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 54433 233458999999999999999999999999999999999999 4689999999999999998887776665
Q ss_pred HHhh--cccC------C----ccccchhHHHHHHHHHHHHHHhhhccCCcccccccCcccHHHHHHHHHHHHHHHH----
Q 047874 818 FKGR--SILG------V----KESVKDTMIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLV---- 881 (941)
Q Consensus 818 ~~~~--~~~~------~----~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---- 881 (941)
+... .|+. . .....+|++| .++.+|.++.+.+++. ..||.+++++|+++++++++++++++.
T Consensus 952 ~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f-~~~~~~~~~~~~~~~~-g~pf~~~~~~N~~~~~~~~~~~~~~~~~~~~ 1029 (1054)
T TIGR01657 952 FELHAQPWYKPENPVDLEKENFPNLLNTVLF-FVSSFQYLITAIVNSK-GPPFREPIYKNKPFVYLLITGLGLLLVLLLD 1029 (1054)
T ss_pred HHHhhCCCccCCCCCCcccccCccHHHHHHH-HHHHHHHHHheEEEcC-CcchhhhHHHhHHHHHHHHHHHHHHHHhhhC
Confidence 4433 2331 0 1233468888 5666677777777763 567777999999998888877665542
Q ss_pred HHHHhhhcccccCCChHHHH
Q 047874 882 MVEFLKTFADTERLNWGQWA 901 (941)
Q Consensus 882 ~~~~~~~~f~~~~l~~~~~~ 901 (941)
.++.++.+|++.++|. .|.
T Consensus 1030 ~~~~l~~~~~~~~~~~-~~~ 1048 (1054)
T TIGR01657 1030 PHPLLGKILQIVPLPQ-EFR 1048 (1054)
T ss_pred CCHHHHhhheeeeCCH-HHH
Confidence 2467899999999985 443
No 15
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=9.5e-105 Score=995.30 Aligned_cols=839 Identities=21% Similarity=0.258 Sum_probs=640.1
Q ss_pred cCCCcCCCCCCccH---HHHHHHHhhHHHHHHHHHHHHHHhhhcccccCCcCccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 49 FGRNRYKKPPAKRF---ISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSNFKQSR 125 (941)
Q Consensus 49 ~G~N~~~~~~~~~~---~~~l~~~f~~~~~~~lli~~~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~ 125 (941)
|.+|.+...|...+ ++.+++||++++|+||++++++++++.+++.++ ...++++++++++++++++.++.
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~~-------~t~~~pL~~v~~~~~~~~~~ed~ 73 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYR-------GTSIVPLAFVLIVTAIKEAIEDI 73 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCCc-------cHhHHhHHHHHHHHHHHHHHHHH
Confidence 56899988887655 788999999999999999999999988765432 23456777777788888888888
Q ss_pred HHHHHhcccCCCeEEEEEC-CEEeeeecCCcccCcEEEEcCCCeeecceEEEecce----EEEeeccCCCCCCceecCC-
Q 047874 126 QFQALANESSDIRVEVVRD-GRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHS----LKVDESSMTGESDRVEVDE- 199 (941)
Q Consensus 126 ~~~~l~~~~~~~~~~V~R~-g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~g~~----l~Vdes~LTGEs~pv~k~~- 199 (941)
++++.++..|+++++|+|+ |++++++|+||+|||+|.|++||+||||+++++++. +.||||+|||||.|+.|.+
T Consensus 74 ~r~~~d~~~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~ 153 (1057)
T TIGR01652 74 RRRRRDKEVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQAL 153 (1057)
T ss_pred HHHHhHHHHhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecc
Confidence 8888887788899999997 899999999999999999999999999999998654 7999999999999998852
Q ss_pred ----------------------------------------------CCCeEeeccEEee-eeEEEEEEEEcccChhhHHH
Q 047874 200 ----------------------------------------------KNPFLLSGTKVTA-GYGFMLVTSVGMSTAWGEMM 232 (941)
Q Consensus 200 ----------------------------------------------~~~~l~aGt~v~~-g~~~~~V~~tG~~T~~g~i~ 232 (941)
.+|++++||.+.. |+++|+|++||.+|. +.
T Consensus 154 ~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk---~~ 230 (1057)
T TIGR01652 154 EETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTK---LM 230 (1057)
T ss_pred hhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhh---hh
Confidence 1257889999977 999999999999994 55
Q ss_pred HhhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCC-ccccccchhhHHHHHHHHH
Q 047874 233 SSISHELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGG-KTKFDDVMNSVINIIAAAV 311 (941)
Q Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i 311 (941)
++....+.+++++++.++++..++..+.++++++++++...+ ..... ...|... .....+....+...+..++
T Consensus 231 ~n~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~--~~~~~----~~~~yl~~~~~~~~~~~~~~~~~~~~~ 304 (1057)
T TIGR01652 231 RNATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIW--NDAHG----KDLWYIRLDVSERNAAANGFFSFLTFL 304 (1057)
T ss_pred hcCCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhe--ecccC----CCccceecCcccccchhHHHHHHHHHH
Confidence 566666778899999999999888777776666655543221 11000 0012110 0000111123455677889
Q ss_pred HHHHHHcCCchhHHHHHHHHHHH------HHHhhh----hhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCC
Q 047874 312 TIIVVAIPEGLPLAVTLTLAFSM------KRMMKD----HAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGK 381 (941)
Q Consensus 312 ~ll~~~~P~~L~~~~~~~~~~~~------~~l~~~----~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~ 381 (941)
.++..++|.+|++.+++++..++ .+|.++ ++.+|+.+.+|+||+|++||+|||||||+|+|+++++++++
T Consensus 305 ~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g 384 (1057)
T TIGR01652 305 ILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAG 384 (1057)
T ss_pred HHHhhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECC
Confidence 99999999999999999999998 778764 49999999999999999999999999999999999999887
Q ss_pred cccccccch------------------------------hhh---------hHHHHHHHHHHHhccCccccccCCCC-C-
Q 047874 382 EAMKSDACS------------------------------LEL---------AQNLYELLQEAVGLNTTGNVYNSNSL-S- 420 (941)
Q Consensus 382 ~~~~~~~~~------------------------------~~~---------~~~~~~~l~~~~~~~~~~~~~~~~~~-~- 420 (941)
..|..+... ..+ .......+..++++||++.....++. .
T Consensus 385 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~ 464 (1057)
T TIGR01652 385 VSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEE 464 (1057)
T ss_pred EEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCc
Confidence 665421100 000 00112334456778888765431111 1
Q ss_pred CccccCCccHHHHHHHHHHhcCCCCcC--------------cccccceeEEeCCCCCCCcEEEEEEecCCceEEEEecCc
Q 047874 421 TSEITGSPTEKAILSWAMIDLGMNVDE--------------PKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGA 486 (941)
Q Consensus 421 ~~~~~~~p~e~al~~~~~~~~~~~~~~--------------~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa 486 (941)
..+..+||+|.|++++|+ ..|+.+.. ....+++++++||+|+||||||+++++++ ++.+++|||
T Consensus 465 ~~y~~~sp~E~ALl~~a~-~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~-~~~l~~KGA 542 (1057)
T TIGR01652 465 ITYQAASPDEAALVKAAR-DVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDG-RIKLLCKGA 542 (1057)
T ss_pred eEEEccCCcHHHHHHHHH-HCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCC-eEEEEEeCc
Confidence 224468999999999998 78875532 22458899999999999999999987654 588999999
Q ss_pred HHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccch---------------------
Q 047874 487 AEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQ--------------------- 545 (941)
Q Consensus 487 ~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~--------------------- 545 (941)
||.|+++|+.. +++.++.+++..++++++|+||+++|+|.+++++...+
T Consensus 543 ~e~il~~~~~~----------~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~ 612 (1057)
T TIGR01652 543 DTVIFKRLSSG----------GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVV 612 (1057)
T ss_pred HHHHHHHhhcc----------chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHH
Confidence 99999999741 23456778899999999999999999999876532211
Q ss_pred hhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCC---------------
Q 047874 546 EKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDL--------------- 610 (941)
Q Consensus 546 ~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~--------------- 610 (941)
.+..|+|++|+|+++++|++|++++++|+.|++|||++||+|||+.+||.++|+++|+.+++...
T Consensus 613 ~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~ 692 (1057)
T TIGR01652 613 AESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVE 692 (1057)
T ss_pred HHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHH
Confidence 13468999999999999999999999999999999999999999999999999999998754310
Q ss_pred --------------------CcccceecchhcccCCHHH----HHHhhcCc--eEEEecCHHHHHHHHHHHHhC-CCEEE
Q 047874 611 --------------------NKDEAVIEGVQFRSLSAEE----RIAKIESI--RVMARSSPLDKLLMVQSLKQK-GHVVA 663 (941)
Q Consensus 611 --------------------~~~~~~~~g~~~~~~~~~~----~~~~~~~~--~v~~~~~p~~K~~iv~~l~~~-g~~v~ 663 (941)
.....+++|+.++.+.+++ +.+.+..+ .||||++|+||.++|+.+|+. |++|+
T Consensus 693 ~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl 772 (1057)
T TIGR01652 693 AAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTL 772 (1057)
T ss_pred HHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEE
Confidence 1123588998887655433 34444444 599999999999999999998 99999
Q ss_pred EEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 664 VTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVL-RWGRCVYNNIQKFLQFQLTVNVAALVINFG 742 (941)
Q Consensus 664 ~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~ 742 (941)
|+|||+||++||++|||||++.+....+|+++||+++. +|..+.+++ .|||++|+|+++.+.|.+++|+..++++++
T Consensus 773 ~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~--~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~ 850 (1057)
T TIGR01652 773 AIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIG--QFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFW 850 (1057)
T ss_pred EEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhh--hHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999853444479999999998 599999987 889999999999999999999999999998
Q ss_pred HHHhcC---CCchhHHHHHHHHhhhhHHHHHHhcc--cCCCCCccCCCCC----CCCCCCccHHHHHHHHHHHHHHHHHH
Q 047874 743 AAVSSG---KVPLTAVQLLWVNLIMDTLGALALAT--EQPTNDLMSKPPV----GRSKPLITKIMWRNLISQAIYQVAIL 813 (941)
Q Consensus 743 ~~~~~~---~~~l~~~~~l~~~~~~~~~~~~~l~~--~~~~~~~~~~~p~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (941)
+.++.+ .+++++++++|+|++++.+|+++++. +++++++|.++|+ .++.++++.+.+..|++.++++++++
T Consensus 851 ~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii 930 (1057)
T TIGR01652 851 YSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVI 930 (1057)
T ss_pred HHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 887654 46789999999999999999999975 4556788888887 45678888888888889999999887
Q ss_pred HHHHHHhhccc-----CC--ccccchhHHHHHHHHHHHHHHhhhccCCcccccccCcccHHHHHHHHHHHHHHHHHHHHh
Q 047874 814 LTLQFKGRSIL-----GV--KESVKDTMIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVMVEFL 886 (941)
Q Consensus 814 ~~~~~~~~~~~-----~~--~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 886 (941)
+++.+...... |. +.....+++|.++++...+..+..-. .| +++.++++.+++++.+++....
T Consensus 931 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~w-t~~~~~~~~~S~~~~~~~~~~~ 1000 (1057)
T TIGR01652 931 FFFPMFAYILGDFVSSGSLDDFSSVGVIVFTALVVIVNLKIALEIN---------RW-NWISLITIWGSILVWLIFVIVY 1000 (1057)
T ss_pred HHHHHHHHcCCccccCCcccchhhHHHHHHHHHHHHHHHHHHHHHh---------Hh-HHHHHHHHHHHHHHHHHHHHHH
Confidence 66544332211 11 12234455555555544444322110 11 2222334444444433332222
Q ss_pred hhcc---------cccCCChHHHHHHHHHHHHHHHHHHHHHhccccCccc
Q 047874 887 KTFA---------DTERLNWGQWAACIGIAAMSWPIGFLIKCIPVSGKQL 927 (941)
Q Consensus 887 ~~~f---------~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 927 (941)
..++ ....-++.+|+.+++..+++++++.+.|.+.+...|.
T Consensus 1001 ~~~~~~~~~~~~~~~~~~s~~f~l~~ll~~~~~l~p~~~~~~~~~~~~P~ 1050 (1057)
T TIGR01652 1001 SSIFPSPAFYKAAPRVMGTFGFWLVLLVIVLISLLPRFTYKAIQRLFRPP 1050 (1057)
T ss_pred HhhcccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 2111 1111357789988888888999999999988755553
No 16
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=5.5e-100 Score=939.27 Aligned_cols=850 Identities=18% Similarity=0.226 Sum_probs=630.0
Q ss_pred hcCCCcCCCCCCc---cHHHHHHHHhhHHHHHHHHHHHHHHhhhcccccCCcCccchhHHHHHHHHHHHHHHHHHHHHHH
Q 047874 48 VFGRNRYKKPPAK---RFISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSNFKQS 124 (941)
Q Consensus 48 ~~G~N~~~~~~~~---~~~~~l~~~f~~~~~~~lli~~~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~ 124 (941)
+|..|.+...|.. -+.+.+++||+++.|+||++++++++++.+++.++ .+.+++++++++++++++..++
T Consensus 86 ~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~-------~t~~~PL~~vl~v~~ike~~Ed 158 (1178)
T PLN03190 86 EFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGR-------GASILPLAFVLLVTAVKDAYED 158 (1178)
T ss_pred cCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCc-------chHHHHHHHHHHHHHHHHHHHH
Confidence 5888999887764 34456899999999999999999999998766542 2456788888889999999999
Q ss_pred HHHHHHhcccCCCeEEEEECCEEeeeecCCcccCcEEEEcCCCeeecceEEEecce----EEEeeccCCCCCCceecCC-
Q 047874 125 RQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHS----LKVDESSMTGESDRVEVDE- 199 (941)
Q Consensus 125 ~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~g~~----l~Vdes~LTGEs~pv~k~~- 199 (941)
.++++.++..|++.++|+|+|.+++++|++|+|||+|+|++||++|||+++++++. ++|||++|||||.|+.|.+
T Consensus 159 ~~r~k~d~~~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~ 238 (1178)
T PLN03190 159 WRRHRSDRIENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAK 238 (1178)
T ss_pred HHHHHhHHhhcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEeccc
Confidence 99999988889999999999999999999999999999999999999999998432 6999999999999998852
Q ss_pred -------------------------------------------CCCeEeeccEE-eeeeEEEEEEEEcccChhhHHHHhh
Q 047874 200 -------------------------------------------KNPFLLSGTKV-TAGYGFMLVTSVGMSTAWGEMMSSI 235 (941)
Q Consensus 200 -------------------------------------------~~~~l~aGt~v-~~g~~~~~V~~tG~~T~~g~i~~~~ 235 (941)
.+|++++|+.+ .+.+++|+|++||.+| |++.+.
T Consensus 239 ~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dT---K~~~N~ 315 (1178)
T PLN03190 239 QETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRET---KAMLNN 315 (1178)
T ss_pred chhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhh---hHhhcC
Confidence 13456677776 3458999999999999 788777
Q ss_pred cccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCc---------cccccchhhHHHH
Q 047874 236 SHELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGK---------TKFDDVMNSVINI 306 (941)
Q Consensus 236 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~ 306 (941)
..++.+.+++++.+|++..++..+.+++|+++.++...+...+. +......|.... ..+..........
T Consensus 316 ~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~--~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (1178)
T PLN03190 316 SGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHR--DELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFT 393 (1178)
T ss_pred CCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccc--ccccccccccccccccccccccccchhhHHHHHH
Confidence 77778999999999999998888777777666555322211111 000001111000 0000000011233
Q ss_pred HHHHHHHHHHHcCCchhHHHHHHHHHHHHHHhhhh----------hhccCchhhhhccCeeEEEeCcccccccCceEEEE
Q 047874 307 IAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDH----------AMVRKLSACETMGSATTICTDKTGTLTLNQMKVTE 376 (941)
Q Consensus 307 ~~~~i~ll~~~~P~~L~~~~~~~~~~~~~~l~~~~----------ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~ 376 (941)
+..++.++..++|.+|++.+++++...+.++.++. +.+|+.+.+|+||+|++||+|||||||+|+|++++
T Consensus 394 f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~ 473 (1178)
T PLN03190 394 FLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQC 473 (1178)
T ss_pred HHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEE
Confidence 45556777899999999999999988888888766 67999999999999999999999999999999999
Q ss_pred EEeCCcccccccc--------------------------hhhh--------h---HHHHHHHHHHHhccCccccccCCC-
Q 047874 377 FWLGKEAMKSDAC--------------------------SLEL--------A---QNLYELLQEAVGLNTTGNVYNSNS- 418 (941)
Q Consensus 377 ~~~~~~~~~~~~~--------------------------~~~~--------~---~~~~~~l~~~~~~~~~~~~~~~~~- 418 (941)
+++++..|+.... ...+ . ....+.+..++++||++.....++
T Consensus 474 ~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~ 553 (1178)
T PLN03190 474 ASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDT 553 (1178)
T ss_pred EEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCC
Confidence 9997765532100 0000 0 011233445778899876532111
Q ss_pred -CC----CccccCCccHHHHHHHHHHhcCC------------CCcCcccccceeEEeCCCCCCCcEEEEEEecCCceEEE
Q 047874 419 -LS----TSEITGSPTEKAILSWAMIDLGM------------NVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHT 481 (941)
Q Consensus 419 -~~----~~~~~~~p~e~al~~~~~~~~~~------------~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~ 481 (941)
.. ..+..+||+|.||+++|+ ++|+ +....+..++++.++||+|+||||||++++++ +++.+
T Consensus 554 ~~~~~~~~~Y~a~SPdE~ALv~~a~-~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~-~~~~l 631 (1178)
T PLN03190 554 SDPTVKLMDYQGESPDEQALVYAAA-AYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPD-KTVKV 631 (1178)
T ss_pred CCccccceEEecCCCcHHHHHHHHH-HCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCC-CcEEE
Confidence 11 124556999999999998 8887 33344567899999999999999999998754 45889
Q ss_pred EecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccch----------------
Q 047874 482 HWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQ---------------- 545 (941)
Q Consensus 482 ~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~---------------- 545 (941)
|+|||||.|+++|++.. +++.++.+++..++++++|+||+++|||.+++++...+
T Consensus 632 ~~KGA~e~il~~~~~~~---------~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~ 702 (1178)
T PLN03190 632 FVKGADTSMFSVIDRSL---------NMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAA 702 (1178)
T ss_pred EEecCcHHHHHhhcccc---------cchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHH
Confidence 99999999999997532 23456778889999999999999999999876433211
Q ss_pred -----hhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCC----------
Q 047874 546 -----EKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDL---------- 610 (941)
Q Consensus 546 -----~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~---------- 610 (941)
.+.+|+|++++|+++++|++|++++++|++|+++||++||+|||+..||.++|++||+.+++...
T Consensus 703 ~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~ 782 (1178)
T PLN03190 703 LLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKES 782 (1178)
T ss_pred HHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhh
Confidence 13468999999999999999999999999999999999999999999999999999998664210
Q ss_pred ---------------------------------CcccceecchhcccCCH----HHHHHhhcCc--eEEEecCHHHHHHH
Q 047874 611 ---------------------------------NKDEAVIEGVQFRSLSA----EERIAKIESI--RVMARSSPLDKLLM 651 (941)
Q Consensus 611 ---------------------------------~~~~~~~~g~~~~~~~~----~~~~~~~~~~--~v~~~~~p~~K~~i 651 (941)
.....+++|..+..+.+ +++.+...++ .||||++|.||+++
T Consensus 783 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~I 862 (1178)
T PLN03190 783 CRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGI 862 (1178)
T ss_pred HHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHH
Confidence 01236888988887764 3455555444 48999999999999
Q ss_pred HHHHHhC-CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHH-HHHHHHHHHHHHHHHHH
Q 047874 652 VQSLKQK-GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVL-RWGRCVYNNIQKFLQFQ 729 (941)
Q Consensus 652 v~~l~~~-g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~ 729 (941)
|+.+|+. +++|+|+|||+||++||++|||||++.+.+..+|+.+||+++. .|..+.+++ .|||+.|.|+.+.+.|.
T Consensus 863 V~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~--~Fr~L~rLLlvHGr~~y~R~s~~i~y~ 940 (1178)
T PLN03190 863 VALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMG--QFRFLVPLLLVHGHWNYQRMGYMILYN 940 (1178)
T ss_pred HHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchh--hhHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 9999997 5899999999999999999999998765666699999999999 555566665 79999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCC---CchhHHHHHHHHhhhhHHHHHHhcc-c--CCCCCccCCCCCC---CCCCCccHHHHH
Q 047874 730 LTVNVAALVINFGAAVSSGK---VPLTAVQLLWVNLIMDTLGALALAT-E--QPTNDLMSKPPVG---RSKPLITKIMWR 800 (941)
Q Consensus 730 l~~n~~~~~~~~~~~~~~~~---~~l~~~~~l~~~~~~~~~~~~~l~~-~--~~~~~~~~~~p~~---~~~~~~~~~~~~ 800 (941)
||+|++.+++++++.++.++ +.++.+.+.++|++++.+|.++++. | -|++.+++.|..+ ++...++...+.
T Consensus 941 fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~ 1020 (1178)
T PLN03190 941 FYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFW 1020 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHHHH
Confidence 99999999999999887664 4568899999999999999999964 4 4556667776554 345678888888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCCccccchhHHHHHHHHHHHHHHh-hhccCCcccccccCcccHHHHHHHHHHHHHH
Q 047874 801 NLISQAIYQVAILLTLQFKGRSILGVKESVKDTMIFNTFVLCQIFNEF-NARKLEKKNIFKGIHKNKLFLAIIGITIALQ 879 (941)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~-~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 879 (941)
.|++.++++++++|++.+....-...+.....++.+...++...+... ..++ | +++-++++.+++++.
T Consensus 1021 ~w~~~~i~qs~iiff~~~~~~~~~~~~~~~~~~~~~~~~v~~vnl~i~~~~~~----------w-t~~~~~~i~~Si~~~ 1089 (1178)
T PLN03190 1021 LTMIDTLWQSAVVFFVPLFAYWASTIDGSSIGDLWTLAVVILVNLHLAMDIIR----------W-NWITHAAIWGSIVAT 1089 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcCceeEhHhhhhHHHHHHHHHHHHHHhh----------h-hHHHHHHHHHHHHHH
Confidence 899999999988876554322111111112233333333333322221 1111 1 221122233333322
Q ss_pred HHHHHHh------hhc--ccccCCChHHHHHHHHHHHHHHHHHHHHHhccccCccc-ccchHH
Q 047874 880 LVMVEFL------KTF--ADTERLNWGQWAACIGIAAMSWPIGFLIKCIPVSGKQL-LPINQE 933 (941)
Q Consensus 880 ~~~~~~~------~~~--f~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~ 933 (941)
+++..+. ..+ +....-++.+|+.+++..+++++++.+.|.+.+...|. ++..|+
T Consensus 1090 ~i~~~~~~~~~~~~~~~~~~~~~~~~~fwl~ill~~~~~l~p~~~~~~~~~~~~P~~~~~~~~ 1152 (1178)
T PLN03190 1090 FICVIVIDAIPTLPGYWAIFHIAKTGSFWLCLLAIVVAALLPRFVVKVLYQYFTPCDVQIARE 1152 (1178)
T ss_pred HHHHHHHHhcccchhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 2221111 111 10111257789888888888899999999888755554 343333
No 17
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.7e-94 Score=809.03 Aligned_cols=802 Identities=21% Similarity=0.283 Sum_probs=608.2
Q ss_pred CCCCCccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHhhhcccccCCcCccchhHHHHHHHHH
Q 047874 32 KGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGSIIFAVFL 111 (941)
Q Consensus 32 ~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f~~~~~~~lli~~~ls~~~~~~~~~~~~~~~~~~~i~~~l~~ 111 (941)
.+||+..+ +.+|+..||+|.+..+. ++.+.++.++.-+|+.+++.+..+++..-. +++++..|++.-+.
T Consensus 158 ~~gL~~~~--~~~r~~iyG~N~i~l~i-k~i~~iLv~EvL~PfYlFQ~fSv~lW~~d~--------Y~~YA~cI~iisv~ 226 (1140)
T KOG0208|consen 158 SNGLERQE--IIDRRIIYGRNVISLPI-KSISQILVKEVLNPFYLFQAFSVALWLADS--------YYYYAFCIVIISVY 226 (1140)
T ss_pred cCCccHHH--HHhHHhhcCCceeeeec-ccHHHHHHHhccchHHHHHhHHhhhhhccc--------chhhhhHHHHHHHH
Confidence 57997765 99999999999999874 699999999999999999998888776543 34445555544444
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCEEeeeecCCcccCcEEEEcC-CCeeecceEEEecceEEEeeccCCC
Q 047874 112 VVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKT-GDQIPADGLFLNGHSLKVDESSMTG 190 (941)
Q Consensus 112 ~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~-G~~iPaD~~ll~g~~l~Vdes~LTG 190 (941)
.++.+.++..+++++++++-+. ...|+|+|||.+++|.++|||||||+.+.+ |-..|||++|++|++ .||||+|||
T Consensus 227 Si~~sv~e~r~qs~rlr~mv~~--~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~c-ivNEsmLTG 303 (1140)
T KOG0208|consen 227 SIVLSVYETRKQSIRLRSMVKF--TCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGDC-IVNESMLTG 303 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC--CceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCcE-EeecccccC
Confidence 5556666666666666666543 358999999999999999999999999988 999999999999987 899999999
Q ss_pred CCCceecCC------------------CCCeEeeccEEee------eeEEEEEEEEcccChhhHHHHhhcccCCCCChhH
Q 047874 191 ESDRVEVDE------------------KNPFLLSGTKVTA------GYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQ 246 (941)
Q Consensus 191 Es~pv~k~~------------------~~~~l~aGt~v~~------g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~ 246 (941)
||.|+.|.+ ..+.+|+||++.+ +.+.++|++||.+|..|++.+++..++.....+-
T Consensus 304 ESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~~fkfy 383 (1140)
T KOG0208|consen 304 ESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPVNFKFY 383 (1140)
T ss_pred CcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCCcccHHH
Confidence 999999974 3457999999964 5789999999999999999999987654443333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHHHcCCchhHHH
Q 047874 247 ARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAV 326 (941)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~L~~~~ 326 (941)
+..-+ ++....++|++.++...+.+..... +....+..++.++.+.+|+|||.++
T Consensus 384 rds~~----fi~~l~~ia~~gfiy~~i~l~~~g~---------------------~~~~iiirsLDliTi~VPPALPAal 438 (1140)
T KOG0208|consen 384 RDSFK----FILFLVIIALIGFIYTAIVLNLLGV---------------------PLKTIIIRSLDLITIVVPPALPAAL 438 (1140)
T ss_pred HHHHH----HHHHHHHHHHHHHHHHhHhHHHcCC---------------------CHHHHhhhhhcEEEEecCCCchhhh
Confidence 33322 2223333444444443333222110 4567888999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCccccccc----c-----------hh
Q 047874 327 TLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDA----C-----------SL 391 (941)
Q Consensus 327 ~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~----~-----------~~ 391 (941)
+++..++.+||.|+||.|-++..+...|++|++|||||||||++.+.+-.+......-+... . ..
T Consensus 439 tvG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 518 (1140)
T KOG0208|consen 439 TVGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSL 518 (1140)
T ss_pred hHHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccc
Confidence 99999999999999999999999999999999999999999999999988876432211000 0 00
Q ss_pred hhhHHHHHHHHHHHhccCccccccCCCCCCccccCCccHHHHHHHHHHhcCC------C------------------CcC
Q 047874 392 ELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGM------N------------------VDE 447 (941)
Q Consensus 392 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~------~------------------~~~ 447 (941)
..+......+..+++.||..... .....|||.|..+.+...|.+.. . ++.
T Consensus 519 ~~~~~~~~~~~~a~atCHSL~~v------~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~ 592 (1140)
T KOG0208|consen 519 RSSSLPMGNLVAAMATCHSLTLV------DGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQ 592 (1140)
T ss_pred cccCCchHHHHHHHhhhceeEEe------CCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccC
Confidence 00000123455667777754332 23467889888877755432210 0 000
Q ss_pred ----cccccceeEEeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHH
Q 047874 448 ----PKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMA 523 (941)
Q Consensus 448 ----~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~ 523 (941)
..+.+.+++.+||+|..+|||||+...++++..+|+|||||.|.+.|++.. .+..+++..++|+
T Consensus 593 ~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~t------------vP~dy~evl~~Yt 660 (1140)
T KOG0208|consen 593 STECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPET------------VPADYQEVLKEYT 660 (1140)
T ss_pred CCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCccc------------CCccHHHHHHHHH
Confidence 011477899999999999999999998888899999999999999998643 3456889999999
Q ss_pred hcccceeeeeeecccccc----ccchhhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHH
Q 047874 524 AKSLRCIAFAHTKAAEAD----GQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAI 599 (941)
Q Consensus 524 ~~g~r~l~~a~~~~~~~~----~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~ 599 (941)
.+|+|++|+|+|+++... ....++..|+|++|+|++.||+++|++++.+|++|++|+||++|+||||..||..+||
T Consensus 661 ~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVak 740 (1140)
T KOG0208|consen 661 HQGFRVIALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAK 740 (1140)
T ss_pred hCCeEEEEEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhh
Confidence 999999999999987651 1234778899999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCCCCC-------------------------------------------------CcccceecchhcccC---CH
Q 047874 600 ECGILNPDVDL-------------------------------------------------NKDEAVIEGVQFRSL---SA 627 (941)
Q Consensus 600 ~~gi~~~~~~~-------------------------------------------------~~~~~~~~g~~~~~~---~~ 627 (941)
+||+..+.... ......++|+.+.-+ ..
T Consensus 741 eCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~ 820 (1140)
T KOG0208|consen 741 ECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFP 820 (1140)
T ss_pred cccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcH
Confidence 99998764311 112345566665543 34
Q ss_pred HHHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchH
Q 047874 628 EERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSS 707 (941)
Q Consensus 628 ~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~ 707 (941)
+.+...+.+..|||||+|.||.++|..+|+.|+.|+|||||+||+.|||+||+||+++.+ .|.-+|.+.-...+...
T Consensus 821 ~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLSea---EASvAApFTSk~~~I~c 897 (1140)
T KOG0208|consen 821 ELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLSEA---EASVAAPFTSKTPSISC 897 (1140)
T ss_pred HHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchhhh---hHhhcCccccCCCchhh
Confidence 667788889999999999999999999999999999999999999999999999999843 45566999988899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhHHHHHHhcccCCCCCccCCCCC
Q 047874 708 VVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPV 787 (941)
Q Consensus 708 i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~p~ 787 (941)
+.+.|+|||+.+..--..++|...|.++..+..+ .++.....++..|.++++++...+.+++++..+|..++-..||
T Consensus 898 Vp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~--~LY~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP- 974 (1140)
T KOG0208|consen 898 VPDVIREGRAALVTSFACFKYMALYSAIQFISVV--FLYLINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRP- 974 (1140)
T ss_pred HhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhh--eeeeecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCC-
Confidence 9999999999999999999999888876543332 3455677889999999999999999999999999999887777
Q ss_pred CCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHh--hcccCC--------ccccchhHHHHHHHHHHHHHHhhhccCCccc
Q 047874 788 GRSKPLITKIMWRNLISQAIYQVAILLTLQFKG--RSILGV--------KESVKDTMIFNTFVLCQIFNEFNARKLEKKN 857 (941)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--------~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~ 857 (941)
+..++++..+..++++.++..++-+..++.. ++|+.. ..+...|.+|++-.+..+++.+.... ..|
T Consensus 975 --~~~L~s~~~~~~l~~q~vli~l~q~i~~l~~~~qpw~~pp~~~~~~nt~s~~~T~lF~vS~fqYi~~a~v~S~--g~p 1050 (1140)
T KOG0208|consen 975 --PTNLLSKKILVPLLLQIVLICLVQWILTLIVEPQPWYEPPNPQVDDNTQSSDNTSLFFVSSFQYIFIALVLSK--GSP 1050 (1140)
T ss_pred --CccccccchhhhhHHHHHHHHHHHHhhheeeccccceecCCCCcCcccccceeeEeeehhHHHHHHhheeecc--CCc
Confidence 4567888777777777766655554444322 244432 12234456665544444555443322 456
Q ss_pred ccccCcccHHHHHHHHHHHHHHHHH--HHH---hhhcccccCCChHHH
Q 047874 858 IFKGIHKNKLFLAIIGITIALQLVM--VEF---LKTFADTERLNWGQW 900 (941)
Q Consensus 858 ~~~~~~~n~~~~~~~~~~~~~~~~~--~~~---~~~~f~~~~l~~~~~ 900 (941)
+.+++|+|+.|...+....+..+.+ +.. ....++.++.+-...
T Consensus 1051 fr~pl~~n~~f~~~i~~i~~~~i~l~~~~~~~~~~~l~~~t~~~~~~~ 1098 (1140)
T KOG0208|consen 1051 FRRPLWKNVLFKVFITVIILSTIYLLFVNYLFIEWKLLQLTYIPTTFD 1098 (1140)
T ss_pred ccCchhcCceeeeehhhHHhhhhhhhhccccchhhhhhceeccCcchh
Confidence 6679999987765443333222222 211 124577777765333
No 18
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-89 Score=742.69 Aligned_cols=815 Identities=22% Similarity=0.267 Sum_probs=631.2
Q ss_pred HHHhhcCCCcCCCCCCc---cHHHHHHHHhhHHHHHHHHHHHHHHhhhcccccCCcCccchhHHHHHHHHHHHHHHHHHH
Q 047874 44 HRINVFGRNRYKKPPAK---RFISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSN 120 (941)
Q Consensus 44 ~r~~~~G~N~~~~~~~~---~~~~~l~~~f~~~~~~~lli~~~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~i~~~~~ 120 (941)
.++++|-+|.+.+.|.+ -+...+++||+.+.|++|++.++.++++.+......++| .++.++..++.+++
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~-------~pl~fvl~itl~ke 146 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYW-------GPLGFVLTITLIKE 146 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhh-------HHHHHHHHHHHHHH
Confidence 56677888888877654 355678999999999999999999998865443222233 23333333333444
Q ss_pred HHHHHHHHHHhcccCCCeEEEE-ECCEEeeeecCCcccCcEEEEcCCCeeecceEEEecc----eEEEeeccCCCCCCce
Q 047874 121 FKQSRQFQALANESSDIRVEVV-RDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGH----SLKVDESSMTGESDRV 195 (941)
Q Consensus 121 ~~~~~~~~~l~~~~~~~~~~V~-R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~g~----~l~Vdes~LTGEs~pv 195 (941)
..++-++++-++..|+...+++ |+|.... +++++++||+|.++.+++||||.++++.+ .+.+.+-.|+||++.+
T Consensus 147 avdd~~r~~rd~~~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWK 225 (1051)
T KOG0210|consen 147 AVDDLKRRRRDRELNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWK 225 (1051)
T ss_pred HHHHHHHHHhhhhhhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCcccce
Confidence 4333333333444455555555 6765544 99999999999999999999999999644 3689999999999755
Q ss_pred ecCC----------------------------------------------CCCeEeeccEEeeeeEEEEEEEEcccChhh
Q 047874 196 EVDE----------------------------------------------KNPFLLSGTKVTAGYGFMLVTSVGMSTAWG 229 (941)
Q Consensus 196 ~k~~----------------------------------------------~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g 229 (941)
-|-+ -+|.++++|.+.+|.+.|+|++||.+|
T Consensus 226 Lrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dt--- 302 (1051)
T KOG0210|consen 226 LRLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDT--- 302 (1051)
T ss_pred eeccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccH---
Confidence 4321 246799999999999999999999999
Q ss_pred HHHHhhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHH
Q 047874 230 EMMSSISHELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAA 309 (941)
Q Consensus 230 ~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (941)
|-.++...++.+-.-++..+|.+.+.+....+.++++.... .|.. +.|...+..
T Consensus 303 RsvMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~------~g~~--------------------~~wyi~~~R 356 (1051)
T KOG0210|consen 303 RSVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAM------KGFG--------------------SDWYIYIIR 356 (1051)
T ss_pred HHHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHh------hcCC--------------------CchHHHHHH
Confidence 66666667777778889999999988876666655543322 2211 145667888
Q ss_pred HHHHHHHHcCCchhHHHHHHHHHHHHHHhhh----hhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccc
Q 047874 310 AVTIIVVAIPEGLPLAVTLTLAFSMKRMMKD----HAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMK 385 (941)
Q Consensus 310 ~i~ll~~~~P~~L~~~~~~~~~~~~~~l~~~----~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~ 385 (941)
++.++...+|.+|-+.+.++...-...+.++ |.++|+....|+||+++++.+|||||||+|+|++++++.+...|+
T Consensus 357 fllLFS~IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s 436 (1051)
T KOG0210|consen 357 FLLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYS 436 (1051)
T ss_pred HHHHHhhhceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeecc
Confidence 8999999999999999999999988888876 577999999999999999999999999999999999998876665
Q ss_pred cccch-------------------------hhhhHHHHHHHHHHHhccCccccccCCCCCCccccCCccHHHHHHHHHHh
Q 047874 386 SDACS-------------------------LELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMID 440 (941)
Q Consensus 386 ~~~~~-------------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~ 440 (941)
.+... .+.+... +.+..++++||+.....++++...++..+|+|.|+++|.+ .
T Consensus 437 ~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv-~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe-~ 514 (1051)
T KOG0210|consen 437 AETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARV-RNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTE-T 514 (1051)
T ss_pred HhHHHHHHHHHHHhhCCCcccccccchhhcCcccHHH-HHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeee-e
Confidence 43210 0111122 2344577899988877666667788999999999999987 6
Q ss_pred cCCCCcCc-------------ccccceeEEeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHhhcccccccCCeEeeC
Q 047874 441 LGMNVDEP-------------KQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCSHYYVKSGTIRIL 507 (941)
Q Consensus 441 ~~~~~~~~-------------~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l 507 (941)
.|.....+ ...|++++.+||+|+.|||+++++++..+++..|.|||+..|.....
T Consensus 515 VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq------------ 582 (1051)
T KOG0210|consen 515 VGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQ------------ 582 (1051)
T ss_pred cceEEeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhcccc------------
Confidence 66543322 23689999999999999999999999888899999999999865443
Q ss_pred CHHHHHHHHHHHHHHHhcccceeeeeeeccccccccch----------------------hhhhccCcEEEEEEeccCCC
Q 047874 508 DGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQ----------------------EKLEETGLTLLGLVGLKDPC 565 (941)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~----------------------~~~~e~~l~~lG~i~~~d~~ 565 (941)
..+++++...+++++|+|++++|+|.+++++.+.. +..+|+|+.++|+++.||++
T Consensus 583 ---~NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkL 659 (1051)
T KOG0210|consen 583 ---YNDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKL 659 (1051)
T ss_pred ---cchhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHH
Confidence 23577888899999999999999999987655422 23569999999999999999
Q ss_pred CcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCC----------------------Ccccceecchhcc
Q 047874 566 RPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDL----------------------NKDEAVIEGVQFR 623 (941)
Q Consensus 566 ~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~----------------------~~~~~~~~g~~~~ 623 (941)
+++++.+++.||+||||+||+|||+.+||..+|+..++...+.+. ...+.+++|+.++
T Consensus 660 Q~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~ 739 (1051)
T KOG0210|consen 660 QDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLE 739 (1051)
T ss_pred hhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHH
Confidence 999999999999999999999999999999999999998765532 3456788887765
Q ss_pred c---CCHHHHHHhhcC--ceEEEecCHHHHHHHHHHHHhC-CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccC
Q 047874 624 S---LSAEERIAKIES--IRVMARSSPLDKLLMVQSLKQK-GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSD 697 (941)
Q Consensus 624 ~---~~~~~~~~~~~~--~~v~~~~~p~~K~~iv~~l~~~-g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad 697 (941)
- ..++|+.+..+. ..++|||+|+||+++++.+|++ |..|+++|||.||+.|+++||+||++-+++..+|.-+||
T Consensus 740 ~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAAD 819 (1051)
T KOG0210|consen 740 FCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAAD 819 (1051)
T ss_pred HHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhcc
Confidence 3 334556555443 4699999999999999999986 899999999999999999999999987789999999999
Q ss_pred EEeccCCchHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhH---HHHHHHHhhhhHHHHHHhc
Q 047874 698 IVIMDDNFSSVVTVL-RWGRCVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTA---VQLLWVNLIMDTLGALALA 773 (941)
Q Consensus 698 ~vl~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~---~~~l~~~~~~~~~~~~~l~ 773 (941)
+.+. .|..+.+++ -|||..|+|..+.-+|.+-..++...++.+++..+.+.|..- +.+.-+..+++.+|.+++.
T Consensus 820 fSIt--qF~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv 897 (1051)
T KOG0210|consen 820 FSIT--QFSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLV 897 (1051)
T ss_pred ccHH--HHHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheee
Confidence 9998 677787776 679999999999999999999998888888876655555544 4456678899999999999
Q ss_pred ccCC--CCCccCCCCCCC---CCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCccccchhHHHHHHHHHHHHHHh
Q 047874 774 TEQP--TNDLMSKPPVGR---SKPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGVKESVKDTMIFNTFVLCQIFNEF 848 (941)
Q Consensus 774 ~~~~--~~~~~~~~p~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~ 848 (941)
.++. +...+..|..++ ++..++.+.+..|...++||..++.+..+ ..+..+.....++.|.++++..+....
T Consensus 898 ~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~g~~---~l~~~ef~~ivaisFtaLi~tELiMVa 974 (1051)
T KOG0210|consen 898 LDRDVSESLAVLYPELYKELTKGRSLSYKTFFIWVLISIYQGSVIMYGAL---LLFDTEFIHIVAISFTALILTELIMVA 974 (1051)
T ss_pred ecccccHHHHhhhHHHHHHHhcCCccchhhhhhhhhHHHHcccHHHHHHH---HHhhhhheEeeeeeeHHHHHHHHHHHh
Confidence 8764 222344443322 34556666677777889998877644222 123444566778889999888877654
Q ss_pred hhccCCcccccccCcccHHHHHHHHHHHHHHHHHHHHhhhcccccCC-ChHHHHHHHHHHHHHHHHHHHHHhccccCccc
Q 047874 849 NARKLEKKNIFKGIHKNKLFLAIIGITIALQLVMVEFLKTFADTERL-NWGQWAACIGIAAMSWPIGFLIKCIPVSGKQL 927 (941)
Q Consensus 849 ~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l-~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 927 (941)
..-+ ..+|.+.++-++++.++++.++++.++|+...+ ++.+++...++.++.+++.+..|.+.|+-+|-
T Consensus 975 Ltv~----------tw~~~m~vae~lsL~~Yivsl~~l~~yfd~~f~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sPp 1044 (1051)
T KOG0210|consen 975 LTVR----------TWHWLMVVAELLSLALYIVSLAFLHEYFDRYFILTYVFLWKVTVITLVSCLPLYFIKALRRKLSPP 1044 (1051)
T ss_pred hhhh----------hhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Confidence 3321 126667777788888888888889998887665 45556667778888899999999999988864
No 19
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=1.1e-86 Score=773.33 Aligned_cols=550 Identities=25% Similarity=0.353 Sum_probs=441.5
Q ss_pred HHhhHHHHHHHHHHHHHHhhhccccc--CCcC-ccchhHHHHHHHHHHHHHHHHH----HHHHHHHHHHHhcccCCCeEE
Q 047874 68 EAFKDTTIIILLVCALLSLGFGIKQV--GLKE-GWFDGGSIIFAVFLVVSVSAVS----NFKQSRQFQALANESSDIRVE 140 (941)
Q Consensus 68 ~~f~~~~~~~lli~~~ls~~~~~~~~--~~~~-~~~~~~~i~~~l~~~~~i~~~~----~~~~~~~~~~l~~~~~~~~~~ 140 (941)
.+|++|..++++++++++++.+..+. +... .++++..+++.++++++++.++ +++.+++.++|.+...+.+++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 47888999999999999988764321 1100 1244566667777777777776 556666677777655444565
Q ss_pred -EEECCEEeeeecCCcccCcEEEEcCCCeeecceEEEecceEEEeeccCCCCCCceecCCC---CCeEeeccEEeeeeEE
Q 047874 141 -VVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESDRVEVDEK---NPFLLSGTKVTAGYGF 216 (941)
Q Consensus 141 -V~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~---~~~l~aGt~v~~g~~~ 216 (941)
|.|||++++|++++|+|||+|.+++||+|||||++++|+. .||||+|||||.|+.|+++ ++ +|+||.+.+|++.
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~d~~~-V~aGT~v~~G~~~ 185 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLA-TVDESAITGESAPVIKESGGDFDN-VIGGTSVASDWLE 185 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcce-EEecchhcCCCCceeccCCCccCe-eecCceeecceEE
Confidence 7799999999999999999999999999999999999987 9999999999999999876 55 9999999999999
Q ss_pred EEEEEEcccChhhHHHHhhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCcccc
Q 047874 217 MLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKF 296 (941)
Q Consensus 217 ~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (941)
++|+++|.+|++||+.+.+..++.+++|+|.....+...+. +.++.+++++..+....
T Consensus 186 i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~-----ii~l~~~~~~~~~~~~~----------------- 243 (673)
T PRK14010 186 VEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLT-----IIFLVVILTMYPLAKFL----------------- 243 (673)
T ss_pred EEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHh-----HHHHHHHHHHHHHHhhc-----------------
Confidence 99999999999999999999888899999976554433221 11222222111110000
Q ss_pred ccchhhHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEE
Q 047874 297 DDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTE 376 (941)
Q Consensus 297 ~~~~~~~~~~~~~~i~ll~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~ 376 (941)
.+...+...++++++++||+|+..++++...++.+|+|+|+++|+.+++|+||++|++|||||||||+|++.+.+
T Consensus 244 -----~~~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~ 318 (673)
T PRK14010 244 -----NFNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADA 318 (673)
T ss_pred -----cHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEE
Confidence 122345667788888899999999999999999999999999999999999999999999999999998877777
Q ss_pred EEeCCcccccccchhhhhHHHHHHHHHHHhccCccccccCCCCCCccccCCccHHHHHHHHHHhcCCCCcCcccccceeE
Q 047874 377 FWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVIN 456 (941)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~ 456 (941)
+...+.. ...+.+..+. .|+. .+.||+++|++++++ +.+.+.... ..+
T Consensus 319 ~~~~~~~------------~~~~ll~~a~-~~~~-------------~s~~P~~~AIv~~a~-~~~~~~~~~-----~~~ 366 (673)
T PRK14010 319 FIPVKSS------------SFERLVKAAY-ESSI-------------ADDTPEGRSIVKLAY-KQHIDLPQE-----VGE 366 (673)
T ss_pred EEeCCCc------------cHHHHHHHHH-HhcC-------------CCCChHHHHHHHHHH-HcCCCchhh-----hcc
Confidence 5432110 1112233222 3331 124999999999987 555443211 123
Q ss_pred EeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeec
Q 047874 457 VEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTK 536 (941)
Q Consensus 457 ~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~ 536 (941)
..||++++|+|++.++ +. .+.||+++.++++|+. .|... ...+++..++++++|+|+++++.
T Consensus 367 ~~pF~~~~k~~gv~~~---g~---~i~kGa~~~il~~~~~----~g~~~------~~~~~~~~~~~a~~G~~~l~v~~-- 428 (673)
T PRK14010 367 YIPFTAETRMSGVKFT---TR---EVYKGAPNSMVKRVKE----AGGHI------PVDLDALVKGVSKKGGTPLVVLE-- 428 (673)
T ss_pred eeccccccceeEEEEC---CE---EEEECCHHHHHHHhhh----cCCCC------chHHHHHHHHHHhCCCeEEEEEE--
Confidence 5799999999998753 22 3459999999999974 12111 11255566788999999998652
Q ss_pred cccccccchhhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccce
Q 047874 537 AAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAV 616 (941)
Q Consensus 537 ~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~ 616 (941)
|++++|+++++|++|++++++|++||++||+++|+|||++.||.++|+++|++.
T Consensus 429 ---------------~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~----------- 482 (673)
T PRK14010 429 ---------------DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR----------- 482 (673)
T ss_pred ---------------CCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce-----------
Confidence 568999999999999999999999999999999999999999999999999974
Q ss_pred ecchhcccCCHHHHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhcc
Q 047874 617 IEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESS 696 (941)
Q Consensus 617 ~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~a 696 (941)
+++|++|+||.++|+.+|++|+.|+|+|||.||+|+|++|||||||| +|+|.||++|
T Consensus 483 ----------------------v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAA 539 (673)
T PRK14010 483 ----------------------FVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAA 539 (673)
T ss_pred ----------------------EEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHHHHhC
Confidence 89999999999999999999999999999999999999999999999 9999999999
Q ss_pred CEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 697 DIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFGAAV 745 (941)
Q Consensus 697 d~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~ 745 (941)
|+++.++++..+.+++++||++|.|+++++.|.++.|+...+..+...+
T Consensus 540 DiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~ 588 (673)
T PRK14010 540 NLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMF 588 (673)
T ss_pred CEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999987665554333
No 20
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=1.4e-89 Score=814.70 Aligned_cols=856 Identities=20% Similarity=0.245 Sum_probs=649.1
Q ss_pred HHhhcCCCcCCCCCCc---cHHHHHHHHhhHHHHHHHHHHHHHHhhhcccccCCcCccchhHHHHHHHHHHHHHHHHHHH
Q 047874 45 RINVFGRNRYKKPPAK---RFISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSNF 121 (941)
Q Consensus 45 r~~~~G~N~~~~~~~~---~~~~~l~~~f~~~~~~~lli~~~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~i~~~~~~ 121 (941)
+..+|-.|.+...|.. -+.+.+++||++..|++|++.+++++++ +++.++. +.++++++++.++++++.
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~~~~~~-------~~~~pl~~vl~~t~iKd~ 99 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LSPFNPY-------TTLVPLLFVLGITAIKDA 99 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-ccccCcc-------ceeeceeeeehHHHHHHH
Confidence 5568999999987764 3556799999999999999999999998 6554432 456788888899999999
Q ss_pred HHHHHHHHHhcccCCCeEEEEECCE-EeeeecCCcccCcEEEEcCCCeeecceEEEecce----EEEeeccCCCCCCcee
Q 047874 122 KQSRQFQALANESSDIRVEVVRDGR-RRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHS----LKVDESSMTGESDRVE 196 (941)
Q Consensus 122 ~~~~~~~~l~~~~~~~~~~V~R~g~-~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~g~~----l~Vdes~LTGEs~pv~ 196 (941)
.++.++++.|+..|..+++|.|++. ++...|+++++||+|++..+|.+|||.++++++. |+|++++|+||++.+.
T Consensus 100 ~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~ 179 (1151)
T KOG0206|consen 100 IEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKV 179 (1151)
T ss_pred HhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccce
Confidence 9999999999999999999999644 8999999999999999999999999999998763 7999999999998776
Q ss_pred cCC----------------------------------------------CCCeEeeccEE-eeeeEEEEEEEEcccChhh
Q 047874 197 VDE----------------------------------------------KNPFLLSGTKV-TAGYGFMLVTSVGMSTAWG 229 (941)
Q Consensus 197 k~~----------------------------------------------~~~~l~aGt~v-~~g~~~~~V~~tG~~T~~g 229 (941)
|.. .++++++|+++ .+.++.++|+.||.+|
T Consensus 180 k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dt--- 256 (1151)
T KOG0206|consen 180 KQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDT--- 256 (1151)
T ss_pred eeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcc---
Confidence 531 12357788888 4568999999999999
Q ss_pred HHHHhhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHH
Q 047874 230 EMMSSISHELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAA 309 (941)
Q Consensus 230 ~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (941)
|++++...++.+++++++.+++....+..+.+.++++..+...++. ...... .. ..|.... .+........+..
T Consensus 257 K~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~-~~~~~~-~~-~~~~~~~---~~~~~~~~~~f~t 330 (1151)
T KOG0206|consen 257 KLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWT-RQDGRH-NG-EWWYLSP---SEAAYAGFVHFLT 330 (1151)
T ss_pred hHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheee-eecccc-cC-chhhhcC---chHHHHHHHHHHH
Confidence 7888888889999999999999888777777666666555433221 111000 00 0111110 0112234455777
Q ss_pred HHHHHHHHcCCchhHHHHHHHHHHHHHHhhh----------hhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEe
Q 047874 310 AVTIIVVAIPEGLPLAVTLTLAFSMKRMMKD----------HAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWL 379 (941)
Q Consensus 310 ~i~ll~~~~P~~L~~~~~~~~~~~~~~l~~~----------~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~ 379 (941)
++.++...+|.+|++.+.+.....+..+.++ .+.+|+.+..|+||+|++|++|||||||+|.|++.+|.+
T Consensus 331 ~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi 410 (1151)
T KOG0206|consen 331 FIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSI 410 (1151)
T ss_pred HHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccc
Confidence 8889999999999999999998887554433 466899999999999999999999999999999999999
Q ss_pred CCcccccccch----------------------------------hhhhHHHHHHHHHHHhccCccccccCCCC-CCccc
Q 047874 380 GKEAMKSDACS----------------------------------LELAQNLYELLQEAVGLNTTGNVYNSNSL-STSEI 424 (941)
Q Consensus 380 ~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~ 424 (941)
++..|...... ........+.+..++++||+...+..++. ...+.
T Consensus 411 ~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~ 490 (1151)
T KOG0206|consen 411 NGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYE 490 (1151)
T ss_pred cCcccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeee
Confidence 98776543210 00112233456678889998877763333 45778
Q ss_pred cCCccHHHHHHHHHHhcCCCCcCc------------ccccceeEEeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHh
Q 047874 425 TGSPTEKAILSWAMIDLGMNVDEP------------KQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILV 492 (941)
Q Consensus 425 ~~~p~e~al~~~~~~~~~~~~~~~------------~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~ 492 (941)
..+|+|.|+++.|+ ++|+.+..+ ...|+++.+.||+|.|||||||++.+++ ++.+|||||+..|.+
T Consensus 491 A~SPDE~AlV~aAr-~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g-~i~LycKGADsvI~e 568 (1151)
T KOG0206|consen 491 AESPDEAALVEAAR-ELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDG-RILLYCKGADSVIFE 568 (1151)
T ss_pred cCCCcHHHHHHHHH-hcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCC-cEEEEEcCcchhhHh
Confidence 89999999999998 888765432 3468999999999999999999998776 699999999999999
Q ss_pred hcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccch---------------------hhhhcc
Q 047874 493 MCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQ---------------------EKLEET 551 (941)
Q Consensus 493 ~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~---------------------~~~~e~ 551 (941)
++.+. .....++..+++++|+.+|+|++++|||.+++++...+ .+.+|+
T Consensus 569 rL~~~----------~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk 638 (1151)
T KOG0206|consen 569 RLSKN----------GEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEK 638 (1151)
T ss_pred hhhhc----------chHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHh
Confidence 99751 24566778889999999999999999999988776544 234699
Q ss_pred CcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCC---------------------
Q 047874 552 GLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDL--------------------- 610 (941)
Q Consensus 552 ~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~--------------------- 610 (941)
||+++|.+++||+++++++++|+.|++||||+|++|||+.+||.+||.+|++..++...
T Consensus 639 ~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~ 718 (1151)
T KOG0206|consen 639 DLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALK 718 (1151)
T ss_pred cchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999998764320
Q ss_pred --------------------CcccceecchhcccCCHHHH----HH--hhcCceEEEecCHHHHHHHHHHHHhC-CCEEE
Q 047874 611 --------------------NKDEAVIEGVQFRSLSAEER----IA--KIESIRVMARSSPLDKLLMVQSLKQK-GHVVA 663 (941)
Q Consensus 611 --------------------~~~~~~~~g~~~~~~~~~~~----~~--~~~~~~v~~~~~p~~K~~iv~~l~~~-g~~v~ 663 (941)
+..+.+++|+.+....+.+. .. .-++..+|||++|.||+.+|+..++. +..++
T Consensus 719 ~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TL 798 (1151)
T KOG0206|consen 719 ETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTL 798 (1151)
T ss_pred HHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEE
Confidence 13567888887765544322 22 23566799999999999999999754 88999
Q ss_pred EEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 664 VTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFGA 743 (941)
Q Consensus 664 ~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~ 743 (941)
+||||+||++|++.|||||++++.+..+|..+||+.+.+.++..-. ++.|||+.|.|+.+++.|.||+|+.+.+++|++
T Consensus 799 AIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rL-LLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy 877 (1151)
T KOG0206|consen 799 AIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERL-LLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWY 877 (1151)
T ss_pred EeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhhh-heeecceeHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999899999999999999977777766 679999999999999999999999999999999
Q ss_pred HHhcC---CCchhHHHHHHHHhhhhHHHHHHhcc---cCCCCCccCCCCCCC---CCCCccHHHHHHHHHHHHHHHHHHH
Q 047874 744 AVSSG---KVPLTAVQLLWVNLIMDTLGALALAT---EQPTNDLMSKPPVGR---SKPLITKIMWRNLISQAIYQVAILL 814 (941)
Q Consensus 744 ~~~~~---~~~l~~~~~l~~~~~~~~~~~~~l~~---~~~~~~~~~~~p~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (941)
.++.+ ...+.++++.++|++++.+|.+++|. |.+.+.+|+.|-.++ +...+++..++.+...++++++++|
T Consensus 878 ~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~F 957 (1151)
T KOG0206|consen 878 QFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIF 957 (1151)
T ss_pred hhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheeee
Confidence 98755 66789999999999999999999985 556666777765543 3457788888889999999998887
Q ss_pred HHHHHhhcc--cCCccccchhHHHHHHHHHHHHHHhhhccCCcccccccCcccHHHHHHHHHHHHHHHHHHHHhhh----
Q 047874 815 TLQFKGRSI--LGVKESVKDTMIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVMVEFLKT---- 888 (941)
Q Consensus 815 ~~~~~~~~~--~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~---- 888 (941)
++.+..... ...+.....-..|.+.+...+....+.+..-..+.|. |-|+ +++.+++++.+++..+.+.
T Consensus 958 f~~~~~~~~~~~~~~G~~~d~~~~G~~~~T~~Vivv~~~iaL~~~ywT--~i~~---i~i~gSi~~~f~f~~iy~~~~~~ 1032 (1151)
T KOG0206|consen 958 FLPYLVFEEQAVTSNGLTADYWTLGTTVFTIIVIVVNLKIALETSYWT--WINH---IVIWGSILLWFVFLFIYSELTPA 1032 (1151)
T ss_pred eeeHhhheeeeeccCCCcCChhhccceEEEEEEEEEEeeeeeeehhee--HHHH---HHHHHHHHHHHHHHHHHhccccc
Confidence 655443311 0001111111111111111111111111100111221 1122 2223333332222211111
Q ss_pred c---------ccccCCChHHHHHHHHHHHHHHHHHHHHHhccccCccc-ccchHHhh
Q 047874 889 F---------ADTERLNWGQWAACIGIAAMSWPIGFLIKCIPVSGKQL-LPINQEAS 935 (941)
Q Consensus 889 ~---------f~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~ 935 (941)
+ +....-++.+|+.+++..+.+++++.+.|.+.+.-.|. ....|+.+
T Consensus 1033 ~~~~~~~~~~~~~~~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~~~~i~~~~ 1089 (1151)
T KOG0206|consen 1033 ISTPDPFYGVAEHLLSSPSFWLTLLLTVVAALLPDFVYKSLQRTFFPTDHDIIQEIE 1089 (1151)
T ss_pred cCCCccHHHHHHHHhcCchHHHHHHHHHHHHHhHHHHHHHHHHhhCCcHHHHHHHHH
Confidence 1 11112356789999999999999999999999877777 44455444
No 21
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=1.2e-84 Score=756.82 Aligned_cols=542 Identities=25% Similarity=0.361 Sum_probs=440.2
Q ss_pred HHHhhHHHHHHHHHHHHHHhhhccccc---CC---cCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEE
Q 047874 67 FEAFKDTTIIILLVCALLSLGFGIKQV---GL---KEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVE 140 (941)
Q Consensus 67 ~~~f~~~~~~~lli~~~ls~~~~~~~~---~~---~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~ 140 (941)
..||++|+.++++++++++++.++.+. +. ...|.....+++.+++...++++++++.+++.+++.+...+.+++
T Consensus 28 ~~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~ 107 (679)
T PRK01122 28 RVQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFAR 107 (679)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 358899999999999999998875321 11 112333333344444445566678888888888888765555799
Q ss_pred EEECCE-EeeeecCCcccCcEEEEcCCCeeecceEEEecceEEEeeccCCCCCCceecCCCCC--eEeeccEEeeeeEEE
Q 047874 141 VVRDGR-RRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESDRVEVDEKNP--FLLSGTKVTAGYGFM 217 (941)
Q Consensus 141 V~R~g~-~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~--~l~aGt~v~~g~~~~ 217 (941)
|+|||+ +++|++++|+|||+|.+++||+|||||++++|+. .||||+|||||.|+.|++++. .+|+||.+.+|++.+
T Consensus 108 vir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~a-~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i 186 (679)
T PRK01122 108 KLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVA-SVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVI 186 (679)
T ss_pred EEECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEccE-EEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEE
Confidence 999987 8999999999999999999999999999999976 999999999999999987532 399999999999999
Q ss_pred EEEEEcccChhhHHHHhhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccc
Q 047874 218 LVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFD 297 (941)
Q Consensus 218 ~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (941)
+|+++|.+|.+||+.+.+.+++.+++|++...+.+...+..+.+.++..++. +.++.+.
T Consensus 187 ~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~---~~~~~g~------------------ 245 (679)
T PRK01122 187 RITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPP---FAAYSGG------------------ 245 (679)
T ss_pred EEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHH---HHHHhCc------------------
Confidence 9999999999999999999888889999988877666554433322222111 1111110
Q ss_pred cchhhHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEE
Q 047874 298 DVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEF 377 (941)
Q Consensus 298 ~~~~~~~~~~~~~i~ll~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~ 377 (941)
. ..+..++++++++|||+++...+.+...++.+++|+|+++|+.+++|+||++|++|||||||||+|+|++.++
T Consensus 246 ----~--~~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~ 319 (679)
T PRK01122 246 ----A--LSITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEF 319 (679)
T ss_pred ----h--HHHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEE
Confidence 1 1567788999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred EeCCcccccccchhhhhHHHHHHHHHHHhccCccccccCCCCCCccccCCccHHHHHHHHHHhcCCCCcCcccccceeEE
Q 047874 378 WLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINV 457 (941)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~ 457 (941)
+..+.. +. .+++ ..+..|+.. +.||..+|++++++.+.+.+. .+..++..+.
T Consensus 320 ~~~~~~----------~~--~~ll-~~a~~~s~~-------------s~hP~~~AIv~~a~~~~~~~~--~~~~~~~~~~ 371 (679)
T PRK01122 320 LPVPGV----------TE--EELA-DAAQLSSLA-------------DETPEGRSIVVLAKQRFNLRE--RDLQSLHATF 371 (679)
T ss_pred EeCCCC----------CH--HHHH-HHHHHhcCC-------------CCCchHHHHHHHHHhhcCCCc--hhhcccccee
Confidence 753321 01 1122 223333321 247999999999873233321 1222456678
Q ss_pred eCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeecc
Q 047874 458 EAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKA 537 (941)
Q Consensus 458 ~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~ 537 (941)
.||++.+++|++.++ + ..+.||++|.+++.|.. +|. +.++++++..++++++|.|++++|+
T Consensus 372 ~pF~s~~~~~gv~~~---g---~~~~kGa~e~il~~~~~----~g~------~~~~~~~~~~~~~a~~G~~~l~va~--- 432 (679)
T PRK01122 372 VPFSAQTRMSGVDLD---G---REIRKGAVDAIRRYVES----NGG------HFPAELDAAVDEVARKGGTPLVVAE--- 432 (679)
T ss_pred EeecCcCceEEEEEC---C---EEEEECCHHHHHHHHHh----cCC------cChHHHHHHHHHHHhCCCcEEEEEE---
Confidence 899999988887542 2 46789999999999963 121 1124567778889999999999985
Q ss_pred ccccccchhhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccccee
Q 047874 538 AEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVI 617 (941)
Q Consensus 538 ~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~ 617 (941)
|++++|+++++|++|+|++++|++||++||+++|+|||++.||.++|+++|++.
T Consensus 433 --------------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~------------ 486 (679)
T PRK01122 433 --------------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD------------ 486 (679)
T ss_pred --------------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE------------
Confidence 568999999999999999999999999999999999999999999999999974
Q ss_pred cchhcccCCHHHHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccC
Q 047874 618 EGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSD 697 (941)
Q Consensus 618 ~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad 697 (941)
+++|++|+||.++|+.+|++|+.|+|+|||.||+|||++|||||||| +|++.||++||
T Consensus 487 ---------------------v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAAD 544 (679)
T PRK01122 487 ---------------------FLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAGN 544 (679)
T ss_pred ---------------------EEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCC
Confidence 89999999999999999999999999999999999999999999999 99999999999
Q ss_pred EEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 698 IVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLT 731 (941)
Q Consensus 698 ~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~ 731 (941)
+++.++++..+.+++++||++.-.--....|++.
T Consensus 545 iVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~ 578 (679)
T PRK01122 545 MVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIA 578 (679)
T ss_pred EEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHH
Confidence 9999999999999999999999555555677765
No 22
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-85 Score=707.17 Aligned_cols=664 Identities=23% Similarity=0.382 Sum_probs=526.5
Q ss_pred hhCCHHHHHHHhCCCCCCCCCccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHhhhcccccCC
Q 047874 16 NLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVCALLSLGFGIKQVGL 95 (941)
Q Consensus 16 ~~~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f~~~~~~~lli~~~ls~~~~~~~~~~ 95 (941)
+-+.+|++.+.|.+.. .|||++| +++|+++||+|++.++|...+.++ +.-|.+|..|..-.++++...+.- -.|.
T Consensus 19 ~~~p~eeVfeeL~~t~-~GLt~~E--~~eRlk~fG~NkleEkken~~lKF-l~Fm~~PlswVMEaAAimA~~Lan-g~~~ 93 (942)
T KOG0205|consen 19 EAIPIEEVFEELLCTR-EGLTSDE--VEERLKIFGPNKLEEKKESKFLKF-LGFMWNPLSWVMEAAAIMAIGLAN-GGGR 93 (942)
T ss_pred ccCchhhhHHHHhcCC-CCCchHH--HHHHHHhhCchhhhhhhhhHHHHH-HHHHhchHHHHHHHHHHHHHHHhc-CCCC
Confidence 5789999999999764 4999988 999999999999998776555554 455667888887777777654431 1234
Q ss_pred cCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCEEeeeecCCcccCcEEEEcCCCeeecceEE
Q 047874 96 KEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLF 175 (941)
Q Consensus 96 ~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~l 175 (941)
.+.|.|.+.|...++++..+++++++.+......+.+-. ..+..|+|||+|.++.+++||||||+.++.||+||||++|
T Consensus 94 ~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~L-A~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRL 172 (942)
T KOG0205|consen 94 PPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGL-APKAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADARL 172 (942)
T ss_pred CcchhhhhhhheeeeecceeeeeeccccchHHHHHHhcc-CcccEEeecCeeeeeeccccccCceeeeccCCEecCccce
Confidence 468999999999999999999999999998888887543 3578999999999999999999999999999999999999
Q ss_pred EecceEEEeeccCCCCCCceecCCCCCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhcccCCCCChhHHHHHHHHHH
Q 047874 176 LNGHSLKVDESSMTGESDRVEVDEKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSW 255 (941)
Q Consensus 176 l~g~~l~Vdes~LTGEs~pv~k~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~ 255 (941)
++|+-|.||+|+|||||.|+.|.+++. +|+||.|.+|++.++|++||.+|..||-+..+.. ......+++.++.+..+
T Consensus 173 l~gD~LkiDQSAlTGESLpvtKh~gd~-vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVds-t~~~GHFqkVLt~IGn~ 250 (942)
T KOG0205|consen 173 LEGDPLKIDQSALTGESLPVTKHPGDE-VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTGIGNF 250 (942)
T ss_pred ecCCccccchhhhcCCccccccCCCCc-eecccccccceEEEEEEEeccceeehhhHHhhcC-CCCcccHHHHHHhhhhH
Confidence 999999999999999999999999876 9999999999999999999999999999988876 56678899988888776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHH-HHHcCCchhHHHHHHHHHHH
Q 047874 256 IGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTII-VVAIPEGLPLAVTLTLAFSM 334 (941)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll-~~~~P~~L~~~~~~~~~~~~ 334 (941)
+...+.+-.++.. ...|.... +. .......+.++ +-.+|.++|..+++.++.++
T Consensus 251 ci~si~~g~lie~---~vmy~~q~-------R~---------------~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs 305 (942)
T KOG0205|consen 251 CICSIALGMLIEI---TVMYPIQH-------RL---------------YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 305 (942)
T ss_pred HHHHHHHHHHHHH---Hhhhhhhh-------hh---------------hhhhhhheheeeecccccccceeeeehhhHHH
Confidence 6443322222211 12222211 11 11122233344 44599999999999999999
Q ss_pred HHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEE----EEeCCcccccccchhhhhHHHHHHHHHHHhccCc
Q 047874 335 KRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTE----FWLGKEAMKSDACSLELAQNLYELLQEAVGLNTT 410 (941)
Q Consensus 335 ~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 410 (941)
.+++++|.++|+.+++|+|+.+|++|+|||||||.|+++|.+ ++..+. +++. .+. .++..+
T Consensus 306 ~rLaqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~gv-----------~~D~--~~L-~A~rAs- 370 (942)
T KOG0205|consen 306 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKGV-----------DKDD--VLL-TAARAS- 370 (942)
T ss_pred HHHHhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeecCC-----------ChHH--HHH-HHHHHh-
Confidence 999999999999999999999999999999999999999987 333222 1111 111 111221
Q ss_pred cccccCCCCCCccccCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEEEEEEecCCceEEEEecCcHHHH
Q 047874 411 GNVYNSNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMI 490 (941)
Q Consensus 411 ~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i 490 (941)
..+ ..|.+|.|++...+ +..+.+..++.++..||++..||-+..+.+.+|+ .+.++||||+.|
T Consensus 371 -r~e----------n~DAID~A~v~~L~-----dPKeara~ikevhF~PFnPV~Krta~ty~d~dG~-~~r~sKGAPeqi 433 (942)
T KOG0205|consen 371 -RKE----------NQDAIDAAIVGMLA-----DPKEARAGIKEVHFLPFNPVDKRTALTYIDPDGN-WHRVSKGAPEQI 433 (942)
T ss_pred -hhc----------ChhhHHHHHHHhhc-----CHHHHhhCceEEeeccCCccccceEEEEECCCCC-EEEecCCChHHH
Confidence 111 24788999988654 2355667789999999999999999999887766 778899999999
Q ss_pred HhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCcchH
Q 047874 491 LVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVR 570 (941)
Q Consensus 491 ~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~ 570 (941)
++.|.. +.+.+++..+.+++++++|+|-+++|++..++... +....-..|+|+.-+-||+|.++.
T Consensus 434 l~l~~~-----------~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~----~~~g~pw~~~gllp~fdpprhdsa 498 (942)
T KOG0205|consen 434 LKLCNE-----------DHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTK----ESPGGPWEFVGLLPLFDPPRHDSA 498 (942)
T ss_pred HHHhhc-----------cCcchHHHHHHHHHHHHhcchhhhhhhhccccccc----cCCCCCcccccccccCCCCccchH
Confidence 999974 34567888999999999999999999987765432 223445679999999999999999
Q ss_pred HHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchh-cccCCHHHHHHhhcCceEEEecCHHHHH
Q 047874 571 AAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQ-FRSLSAEERIAKIESIRVMARSSPLDKL 649 (941)
Q Consensus 571 ~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 649 (941)
++|++....|++|.|+|||...-++..++++|+-.+-.. +..+-|.. -+.+...+..+.+++..=|+.+.|++|.
T Consensus 499 ~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmyp----ss~llG~~~~~~~~~~~v~elie~adgfAgVfpehKy 574 (942)
T KOG0205|consen 499 ETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP----SSALLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKY 574 (942)
T ss_pred HHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCC----chhhccCCCCCCCCCCcHHHHhhhccCccccCHHHHH
Confidence 999999999999999999999999999999998764221 11111111 1122233455566666789999999999
Q ss_pred HHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 650 LMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQ 729 (941)
Q Consensus 650 ~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~ 729 (941)
++|+.||++|+.|+|+|||.||+|+|+.||+|||+. .++|.|+.+||+|+..+.++.+..++..+|.+|+|++.+..|.
T Consensus 575 ~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava-~atdaar~asdiVltepglSviI~avltSraIfqrmknytiya 653 (942)
T KOG0205|consen 575 EIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 653 (942)
T ss_pred HHHHHHhhcCceecccCCCcccchhhcccccceeec-cchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeee
Confidence 999999999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhh
Q 047874 730 LTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMD 765 (941)
Q Consensus 730 l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~ 765 (941)
++-.+-.+ +.|+........-++|..++++.++-|
T Consensus 654 vsitiriv-~gfml~alIw~~df~pfmvliiailnd 688 (942)
T KOG0205|consen 654 VSITIRIV-FGFMLIALIWEFDFSPFMVLIIAILND 688 (942)
T ss_pred ehhHHHHH-HHHHHHHHHHHhcCCHHHHHHHHHhcC
Confidence 88776544 233322233344556666665555444
No 23
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=5.1e-81 Score=724.42 Aligned_cols=546 Identities=25% Similarity=0.370 Sum_probs=444.1
Q ss_pred HHHhhHHHHHHHHHHHHHHhhhcccc--cC---CcCccchh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCe
Q 047874 67 FEAFKDTTIIILLVCALLSLGFGIKQ--VG---LKEGWFDG---GSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIR 138 (941)
Q Consensus 67 ~~~f~~~~~~~lli~~~ls~~~~~~~--~~---~~~~~~~~---~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~ 138 (941)
..||++|..++++++++++++.++.+ .+ ....|++. ..+++.+++...++++++++.+++.++|.+...+..
T Consensus 27 ~~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~ 106 (675)
T TIGR01497 27 KAQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTF 106 (675)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCce
Confidence 34899999999999999999876532 11 11247764 233344455566777888899999999987655556
Q ss_pred EEEEE-CCEEeeeecCCcccCcEEEEcCCCeeecceEEEecceEEEeeccCCCCCCceecCCCCC--eEeeccEEeeeeE
Q 047874 139 VEVVR-DGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESDRVEVDEKNP--FLLSGTKVTAGYG 215 (941)
Q Consensus 139 ~~V~R-~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~--~l~aGt~v~~g~~ 215 (941)
++|+| ||++++|++++|+|||+|.+++||+|||||++++|+. .||||+|||||.|+.|++++. .+|+||.+.+|++
T Consensus 107 a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~ 185 (675)
T TIGR01497 107 AKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGVA-SVDESAITGESAPVIKESGGDFASVTGGTRILSDWL 185 (675)
T ss_pred EEEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEccE-EEEcccccCCCCceeecCCCCcceeecCcEEEeeEE
Confidence 88886 8999999999999999999999999999999999975 999999999999999998753 3999999999999
Q ss_pred EEEEEEEcccChhhHHHHhhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccc
Q 047874 216 FMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTK 295 (941)
Q Consensus 216 ~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (941)
.++|+++|.+|.+||+.+.+..++.+++|+|...+.+..++..+.+.+ ++.++.... +.
T Consensus 186 ~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~---~~~~~~~~~-~~----------------- 244 (675)
T TIGR01497 186 VVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLV---TATLWPFAA-YG----------------- 244 (675)
T ss_pred EEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHH---HHHHHHHHH-hc-----------------
Confidence 999999999999999999999888889999988777655443322211 122211111 11
Q ss_pred cccchhhHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEE
Q 047874 296 FDDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVT 375 (941)
Q Consensus 296 ~~~~~~~~~~~~~~~i~ll~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~ 375 (941)
.....+..++++++++|||+++...+.....++.+++|+|+++|+.+++|++|++|++|||||||||+|+|++.
T Consensus 245 ------~~~~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~ 318 (675)
T TIGR01497 245 ------GNAISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLAS 318 (675)
T ss_pred ------ChhHHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEE
Confidence 00123566788999999999888777777789999999999999999999999999999999999999999999
Q ss_pred EEEeCCcccccccchhhhhHHHHHHHHHHHhccCccccccCCCCCCccccCCccHHHHHHHHHHhcCCCCcCccccccee
Q 047874 376 EFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVI 455 (941)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l 455 (941)
+++..+.. + ..+++. .++.|+. .+.||.++|++++++ +.+.+... ..++..
T Consensus 319 ~~~~~~~~----------~--~~~ll~-~aa~~~~-------------~s~hP~a~Aiv~~a~-~~~~~~~~--~~~~~~ 369 (675)
T TIGR01497 319 EFIPAQGV----------D--EKTLAD-AAQLASL-------------ADDTPEGKSIVILAK-QLGIREDD--VQSLHA 369 (675)
T ss_pred EEEecCCC----------c--HHHHHH-HHHHhcC-------------CCCCcHHHHHHHHHH-HcCCCccc--cccccc
Confidence 98753211 0 012222 2223321 135899999999988 55554322 123456
Q ss_pred EEeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeee
Q 047874 456 NVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHT 535 (941)
Q Consensus 456 ~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~ 535 (941)
+..||++.++++++.+. ++ ..+.||++|.+++.|.. +|.. .+..+++..++++++|.|++++|+
T Consensus 370 ~~~pf~~~~~~sg~~~~--~g---~~~~kGa~e~i~~~~~~----~g~~------~~~~~~~~~~~~a~~G~r~l~va~- 433 (675)
T TIGR01497 370 TFVEFTAQTRMSGINLD--NG---RMIRKGAVDAIKRHVEA----NGGH------IPTDLDQAVDQVARQGGTPLVVCE- 433 (675)
T ss_pred eEEEEcCCCcEEEEEEe--CC---eEEEECCHHHHHHHHHh----cCCC------CcHHHHHHHHHHHhCCCeEEEEEE-
Confidence 78899999887776543 22 46789999999988852 1211 123466777889999999999996
Q ss_pred ccccccccchhhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccc
Q 047874 536 KAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEA 615 (941)
Q Consensus 536 ~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~ 615 (941)
|.+++|+++++|++||+++++|++|+++|++++|+|||+..+|.++|+++|++.
T Consensus 434 ----------------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~---------- 487 (675)
T TIGR01497 434 ----------------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD---------- 487 (675)
T ss_pred ----------------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE----------
Confidence 347999999999999999999999999999999999999999999999999974
Q ss_pred eecchhcccCCHHHHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhc
Q 047874 616 VIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKES 695 (941)
Q Consensus 616 ~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ 695 (941)
++++++|++|.++|+.+|++|+.|+|+|||.||+|||++||+||||+ ++++.++++
T Consensus 488 -----------------------v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~-~gt~~akea 543 (675)
T TIGR01497 488 -----------------------FIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEA 543 (675)
T ss_pred -----------------------EEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHh
Confidence 89999999999999999999999999999999999999999999999 899999999
Q ss_pred cCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 696 SDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVA 735 (941)
Q Consensus 696 ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~ 735 (941)
||+++.++++..+.+++++||+++-+-.....|++..++.
T Consensus 544 adivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~ 583 (675)
T TIGR01497 544 ANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVA 583 (675)
T ss_pred CCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHH
Confidence 9999999999999999999999999999999999876654
No 24
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3e-80 Score=681.46 Aligned_cols=832 Identities=19% Similarity=0.231 Sum_probs=597.7
Q ss_pred HHHHHHhCCCCCCCCCccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHhhhcccccCCcCccc
Q 047874 21 NQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWF 100 (941)
Q Consensus 21 ~~~~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f~~~~~~~lli~~~ls~~~~~~~~~~~~~~~ 100 (941)
++-...++.+ +|+. ++.++++-..+||+|+.+.+. +.|..++.+.-..|++.++.++..+++.-. +||
T Consensus 151 ~~~~g~~~k~--~G~~-~~~~i~~a~~~~G~N~fdi~v-PtF~eLFkE~A~aPfFVFQVFcvgLWCLDe--------yWY 218 (1160)
T KOG0209|consen 151 DEPFGYFQKS--TGHE-EESEIKLAKHKYGKNKFDIVV-PTFSELFKEHAVAPFFVFQVFCVGLWCLDE--------YWY 218 (1160)
T ss_pred CCcchhhhhc--cCcc-hHHHHHHHHHHhcCCccccCC-ccHHHHHHHhccCceeeHhHHhHHHHHhHH--------HHH
Confidence 3334444443 5777 445677777889999999874 489999999999999999999998887653 687
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-CCeEEEEECCEEeeeecCCcccCcEEEEcC---CCeeecceEEE
Q 047874 101 DGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESS-DIRVEVVRDGRRRGLSIFDVVVGEVVCLKT---GDQIPADGLFL 176 (941)
Q Consensus 101 ~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~-~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~---G~~iPaD~~ll 176 (941)
.+... ++..+.+++.--+++.+....+.++.+ +..+.|+|+++|+.+.++||.|||+|.+.. ...||||.+|+
T Consensus 219 ySlFt---LfMli~fE~tlV~Qrm~~lse~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL 295 (1160)
T KOG0209|consen 219 YSLFT---LFMLIAFEATLVKQRMRTLSEFRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLL 295 (1160)
T ss_pred HHHHH---HHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEE
Confidence 66443 344455566666667777777766654 457999999999999999999999999976 77899999999
Q ss_pred ecceEEEeeccCCCCCCceecCC----------------CCCeEeeccEEee-------------eeEEEEEEEEcccCh
Q 047874 177 NGHSLKVDESSMTGESDRVEVDE----------------KNPFLLSGTKVTA-------------GYGFMLVTSVGMSTA 227 (941)
Q Consensus 177 ~g~~l~Vdes~LTGEs~pv~k~~----------------~~~~l~aGt~v~~-------------g~~~~~V~~tG~~T~ 227 (941)
.|++ .|||++|||||.|.-|++ +..++|.||++++ |-+.+.|++||.+|.
T Consensus 296 ~Gsc-iVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTS 374 (1160)
T KOG0209|consen 296 RGSC-IVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETS 374 (1160)
T ss_pred ecce-eechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEecccccc
Confidence 9987 899999999999998873 3458999999964 668999999999999
Q ss_pred hhHHHHhhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCC-cccccCCccccccchhhHHHH
Q 047874 228 WGEMMSSISHELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMG-KREFVGGKTKFDDVMNSVINI 306 (941)
Q Consensus 228 ~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 306 (941)
.|++.+.+....++-|.-.+.. ..++.+.+ +|++...+|.+.. ...+. + +=.+.
T Consensus 375 QGkLvRtilf~aervTaNn~Et----f~FILFLl-----VFAiaAa~Yvwv~-Gskd~~R---------------srYKL 429 (1160)
T KOG0209|consen 375 QGKLVRTILFSAERVTANNRET----FIFILFLL-----VFAIAAAGYVWVE-GSKDPTR---------------SRYKL 429 (1160)
T ss_pred CCceeeeEEecceeeeeccHHH----HHHHHHHH-----HHHHHhhheEEEe-cccCcch---------------hhhhe
Confidence 9999998877665555433321 12222222 2222222221111 11111 1 22345
Q ss_pred HHHHHHHHHHHcCCchhHHHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCccccc
Q 047874 307 IAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKS 386 (941)
Q Consensus 307 ~~~~i~ll~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~ 386 (941)
+.-++.++...+|+-||+-++++...+...++|.+++|..+-++.-.|++|+.|||||||||+..|.|.++.-.......
T Consensus 430 ~LeC~LIlTSVvPpELPmELSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~ 509 (1160)
T KOG0209|consen 430 FLECTLILTSVVPPELPMELSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGA 509 (1160)
T ss_pred eeeeeEEEeccCCCCCchhhhHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCccc
Confidence 66677788899999999999999999999999999999999999999999999999999999999999987642221111
Q ss_pred ccchhhhhHHHHHHHHHHHhccCccccccCCCCCCccccCCccHHHHHHHHHHhcCCCC-c----CcccccceeEEeCCC
Q 047874 387 DACSLELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGMNV-D----EPKQYCTVINVEAFN 461 (941)
Q Consensus 387 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~-~----~~~~~~~~l~~~~F~ 461 (941)
-........+..+ .++.||+-...+ ....|||.|+|.+++..|.....- . ...+..++++.+.|+
T Consensus 510 ~~~~s~~p~~t~~----vlAscHsLv~le------~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFs 579 (1160)
T KOG0209|consen 510 LTPASKAPNETVL----VLASCHSLVLLE------DKLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFS 579 (1160)
T ss_pred ccchhhCCchHHH----HHHHHHHHHHhc------CcccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHH
Confidence 1111122222222 233444422221 137899999999997643322111 1 112246778999999
Q ss_pred CCCCcEEEEEEecCC---ceEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccc
Q 047874 462 SEKKRSGVLMKRINE---KVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAA 538 (941)
Q Consensus 462 s~~k~~sviv~~~~~---~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~ 538 (941)
|..|||||++..... .++++.+|||||.|.++-.+ .+..+++...+++++|.||+|++||++.
T Consensus 580 SaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~d--------------vP~dY~~iYk~ytR~GsRVLALg~K~l~ 645 (1160)
T KOG0209|consen 580 SALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRD--------------VPKDYDEIYKRYTRQGSRVLALGYKPLG 645 (1160)
T ss_pred HHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHh--------------CchhHHHHHHHHhhccceEEEEeccccc
Confidence 999999999875432 36889999999999876643 3466788899999999999999999987
Q ss_pred c----ccccchhhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCC------
Q 047874 539 E----ADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDV------ 608 (941)
Q Consensus 539 ~----~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~------ 608 (941)
. ...+..++..|+||+|.|++.|.-|+|+|++++|+.|++++++++|+||||+.||.++|+++||.....
T Consensus 646 ~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~ 725 (1160)
T KOG0209|consen 646 DMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLP 725 (1160)
T ss_pred ccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccC
Confidence 3 233355778899999999999999999999999999999999999999999999999999999975411
Q ss_pred ------C-----------------------CCcccceecchhcccCCH-HHHHHhhcCceEEEecCHHHHHHHHHHHHhC
Q 047874 609 ------D-----------------------LNKDEAVIEGVQFRSLSA-EERIAKIESIRVMARSSPLDKLLMVQSLKQK 658 (941)
Q Consensus 609 ------~-----------------------~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~ 658 (941)
+ .+.++.+++|..++.+.. +.+.+.+..+.||||+.|.||..++..+++.
T Consensus 726 ~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~ 805 (1160)
T KOG0209|consen 726 EEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKL 805 (1160)
T ss_pred ccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhc
Confidence 0 023567788888887654 3567778889999999999999999999999
Q ss_pred CCEEEEEcCCccCHHHHHhCCccEEecCCCcH------------------------------------------------
Q 047874 659 GHVVAVTGDGTNDAPALRAADIGLSMGIQGTE------------------------------------------------ 690 (941)
Q Consensus 659 g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~------------------------------------------------ 690 (941)
|+.++|||||+||+.|||+||||||+-.+..+
T Consensus 806 Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~e~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 885 (1160)
T KOG0209|consen 806 GYVTLMCGDGTNDVGALKQAHVGVALLNNPEESKKDKEKRRKKKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKTR 885 (1160)
T ss_pred CeEEEEecCCCcchhhhhhcccceehhcCChhhhhHHhhhhhhccccCchhhHHHhhhccCCCCCCCCccccChhHHHHH
Confidence 99999999999999999999999998623221
Q ss_pred ----------------------HHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 047874 691 ----------------------VAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFGAAVSSG 748 (941)
Q Consensus 691 ----------------------~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~ 748 (941)
.|.-+|.+.-...+.+++-++|++||++.-+.-|.+... +-|..... .-.+.++.-
T Consensus 886 e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~asv~~v~~IIrQGRctLVtTlQMfKIL-ALN~LisA-YslSvlyld 963 (1160)
T KOG0209|consen 886 ERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKLASVSSVTHIIRQGRCTLVTTLQMFKIL-ALNCLISA-YSLSVLYLD 963 (1160)
T ss_pred HHHHHHHHHHhhcccCccccccccccccccccccchHHHHHHHHHhcchhHHHHHHHHHHH-HHHHHHHH-HHHHHhhhc
Confidence 112234444444568889999999999998777766543 33432211 112223333
Q ss_pred CCchhHHHHHHHHhhhhHHHHHHhcccCCCCCccCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhccc----
Q 047874 749 KVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRSIL---- 824 (941)
Q Consensus 749 ~~~l~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 824 (941)
..-++..|...--+++. .-.+.++..+|-+.+-++.|. .++++...+..++.|-.+....++++.-......
T Consensus 964 GVKfgD~QaTisGlLla-~cFlfISrskPLetLSkeRP~---~nIFN~Y~i~svl~QFaVH~~tLvYi~~~a~~~~p~~~ 1039 (1160)
T KOG0209|consen 964 GVKFGDTQATISGLLLA-ACFLFISRSKPLETLSKERPL---PNIFNVYIILSVLLQFAVHIATLVYITGEAYKLEPPEE 1039 (1160)
T ss_pred CceecchhHhHHHHHHH-HHHhheecCCchhhHhhcCCC---CCcchHHHHHHHHHHHHHHHHHhhhhHHHHHhcCCccc
Confidence 44555566554444332 224555678888888888774 4678776666666555554444433322111111
Q ss_pred ------CCccccchhHHHHHHHHHHHHH-HhhhccCCcccccccCcccHHHHHHHHHHHHHHHHHH----HHhhhccccc
Q 047874 825 ------GVKESVKDTMIFNTFVLCQIFN-EFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVMV----EFLKTFADTE 893 (941)
Q Consensus 825 ------~~~~~~~~t~~f~~lv~~~~~~-~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----~~~~~~f~~~ 893 (941)
.++++..+|.+|..-...|+.. ++|++ ..||..++..|+.++++++.+..+.+... +=++.-|...
T Consensus 1040 ~vdl~~~F~PsllNt~vyiisl~~QvsTFAVNY~---G~PF~Esl~eNK~l~y~ll~~~~~~~~l~tg~~peLn~~~~lV 1116 (1160)
T KOG0209|consen 1040 KVDLEEKFSPSLLNTTVYIISLAQQVSTFAVNYQ---GRPFRESLRENKGLLYGLLGSAGVIIALATGSSPELNEKFELV 1116 (1160)
T ss_pred ccChhcccChhhhhhHHHHHHHHHHHHHhhhhcc---CcchhhhhhhccchHHHHHHHHHHHHHHHhccChhHHhheeee
Confidence 1235667788887777777765 56655 46888899999988888877665544443 2357778888
Q ss_pred CCCh----HHHHHHHHHHHHHHHHHHHHHhccccCcc
Q 047874 894 RLNW----GQWAACIGIAAMSWPIGFLIKCIPVSGKQ 926 (941)
Q Consensus 894 ~l~~----~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 926 (941)
+++- ....+.++--+++++++.+.|++-...+|
T Consensus 1117 ~mp~~fk~~ll~~l~lD~v~c~~~er~~~f~f~~~k~ 1153 (1160)
T KOG0209|consen 1117 DMPQDFKIKLLAVLVLDFVLCYLVERVLKFFFGDHKP 1153 (1160)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCc
Confidence 8763 22345566667788899999987764443
No 25
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-77 Score=696.01 Aligned_cols=485 Identities=30% Similarity=0.433 Sum_probs=409.9
Q ss_pred HHHHHHHHHhcccCCCeEEEEE-CCEEeeeecCCcccCcEEEEcCCCeeecceEEEecceEEEeeccCCCCCCceecCCC
Q 047874 122 KQSRQFQALANESSDIRVEVVR-DGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESDRVEVDEK 200 (941)
Q Consensus 122 ~~~~~~~~l~~~~~~~~~~V~R-~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~ 200 (941)
+..+..++|.+. .++++++++ ||++++||.+||++||+|+|+|||+||+||++++|++ .||||++||||.|+.|.++
T Consensus 197 ra~~ai~~L~~l-~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G~s-~vDeS~iTGEs~PV~k~~G 274 (713)
T COG2217 197 RARRAIRALLDL-APKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSS-SVDESMLTGESLPVEKKPG 274 (713)
T ss_pred HHHHHHHHHHcc-CCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEeCcE-EeecchhhCCCCCEecCCC
Confidence 333444445433 467887776 5558999999999999999999999999999999999 9999999999999999998
Q ss_pred CCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Q 047874 201 NPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNT 280 (941)
Q Consensus 201 ~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (941)
+. +++||.+.+|.....|+++|.+|.+++|.+.+.+++..++|.|+..|+++.++++.++.+++++|++|.+ .+..
T Consensus 275 d~-V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~---~~~~ 350 (713)
T COG2217 275 DE-VFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPL---FGGG 350 (713)
T ss_pred CE-EeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHH---hcCC
Confidence 66 9999999999999999999999999999999999999999999999999999999999999888886432 2210
Q ss_pred CCCCCcccccCCccccccchhhHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEE
Q 047874 281 RDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTIC 360 (941)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~ 360 (941)
++...+..++++++++|||+|.+++|++...+..+.+++|+++|+.+++|.++++|+++
T Consensus 351 ---------------------~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvv 409 (713)
T COG2217 351 ---------------------DWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVV 409 (713)
T ss_pred ---------------------cHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEE
Confidence 45668899999999999999999999999999999999999999999999999999999
Q ss_pred eCcccccccCceEEEEEEeCCcccccccchhhhhHHHHHHHHHHHhccCccccccCCCCCCccccCCccHHHHHHHHHHh
Q 047874 361 TDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMID 440 (941)
Q Consensus 361 ~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~ 440 (941)
||||||||+|+|+|.++...+. ++ .+.|..+.++. ..+.||..+|+++++. +
T Consensus 410 FDKTGTLT~G~p~v~~v~~~~~--~e-----------~~~L~laAalE--------------~~S~HPiA~AIv~~a~-~ 461 (713)
T COG2217 410 FDKTGTLTEGKPEVTDVVALDG--DE-----------DELLALAAALE--------------QHSEHPLAKAIVKAAA-E 461 (713)
T ss_pred EeCCCCCcCCceEEEEEecCCC--CH-----------HHHHHHHHHHH--------------hcCCChHHHHHHHHHH-h
Confidence 9999999999999999886543 11 23343343322 2367999999999887 4
Q ss_pred cCCCCcCcccccceeEEeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHH
Q 047874 441 LGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQ 520 (941)
Q Consensus 441 ~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~ 520 (941)
.+.. .. +....+| .++-.+. .++..+ .-|++..+.+.-.. .+ . ..+..+
T Consensus 462 ~~~~--~~----~~~~~i~---G~Gv~~~----v~g~~v---~vG~~~~~~~~~~~----------~~----~-~~~~~~ 510 (713)
T COG2217 462 RGLP--DV----EDFEEIP---GRGVEAE----VDGERV---LVGNARLLGEEGID----------LP----L-LSERIE 510 (713)
T ss_pred cCCC--Cc----cceeeec---cCcEEEE----ECCEEE---EEcCHHHHhhcCCC----------cc----c-hhhhHH
Confidence 4311 11 1112222 2232222 244334 44998887542211 01 0 345566
Q ss_pred HHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHH
Q 047874 521 EMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIE 600 (941)
Q Consensus 521 ~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~ 600 (941)
.+..+|..++.++. |..++|+++++|++|++++++|++||+.|++++|+|||+..+|+++|++
T Consensus 511 ~~~~~G~t~v~va~-----------------dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~ 573 (713)
T COG2217 511 ALESEGKTVVFVAV-----------------DGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKE 573 (713)
T ss_pred HHHhcCCeEEEEEE-----------------CCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH
Confidence 77788887777765 4579999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCc
Q 047874 601 CGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADI 680 (941)
Q Consensus 601 ~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~v 680 (941)
+||+. +++.+.|++|.++|+.+|++|++|+|+|||.||+|+|.+|||
T Consensus 574 lGId~---------------------------------v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdV 620 (713)
T COG2217 574 LGIDE---------------------------------VRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADV 620 (713)
T ss_pred cChHh---------------------------------heccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCe
Confidence 99975 899999999999999999999999999999999999999999
Q ss_pred cEEecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 681 GLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFGA 743 (941)
Q Consensus 681 gIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~ 743 (941)
||||| +|+|+|+++||++++++++..++++++.+|+++++|++|+.|+|.||++++++..+.
T Consensus 621 GiAmG-~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g 682 (713)
T COG2217 621 GIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAAGG 682 (713)
T ss_pred eEeec-CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999 799999999999999999999999999999999999999999999999998887765
No 26
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=7.6e-74 Score=688.13 Aligned_cols=503 Identities=25% Similarity=0.335 Sum_probs=418.5
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCEEeeeecCCcccCcEEEEcCCCeeecceEEEec
Q 047874 99 WFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNG 178 (941)
Q Consensus 99 ~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~g 178 (941)
|.++..+++.+++.-.++.+.+.+.++..+++.+. .+.+++|+|||++++|++++|+|||+|++++||+|||||+|++|
T Consensus 206 ~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l-~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g 284 (741)
T PRK11033 206 TAEAAMVLLLFLIGERLEGYAASRARRGVSALMAL-VPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSP 284 (741)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEEC
Confidence 44444444444444455555666666666777654 56789999999999999999999999999999999999999999
Q ss_pred ceEEEeeccCCCCCCceecCCCCCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhcccCCCCChhHHHHHHHHHHHHH
Q 047874 179 HSLKVDESSMTGESDRVEVDEKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSWIGK 258 (941)
Q Consensus 179 ~~l~Vdes~LTGEs~pv~k~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~ 258 (941)
+. .||||+|||||.|+.|..++ .+|+||.+.+|.++++|+++|.+|.+||+.+.+.+++.+++|+++.+++++.++++
T Consensus 285 ~~-~vdes~lTGEs~Pv~k~~Gd-~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~ 362 (741)
T PRK11033 285 FA-SFDESALTGESIPVERATGE-KVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTP 362 (741)
T ss_pred cE-EeecccccCCCCCEecCCCC-eeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHH
Confidence 86 99999999999999999875 49999999999999999999999999999999999888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHh
Q 047874 259 IGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMM 338 (941)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~L~~~~~~~~~~~~~~l~ 338 (941)
+++.+++++++++.+. .+. ++...+..++++++++|||+|.+++|++...+..+++
T Consensus 363 ~v~~~a~~~~~~~~~~--~~~----------------------~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aa 418 (741)
T PRK11033 363 AIMLVALLVILVPPLL--FAA----------------------PWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAA 418 (741)
T ss_pred HHHHHHHHHHHHHHHH--ccC----------------------CHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHH
Confidence 9999999888775321 111 3445678899999999999999999999999999999
Q ss_pred hhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccccchhhhhHHHHHHHHHHHhccCccccccCCC
Q 047874 339 KDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNS 418 (941)
Q Consensus 339 ~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 418 (941)
|+|+++|+.+++|+|+++|++|||||||||+|+|+|.+++..+.. + .+ +++..+....
T Consensus 419 r~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~-~--------~~---~~l~~aa~~e---------- 476 (741)
T PRK11033 419 RRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATGI-S--------ES---ELLALAAAVE---------- 476 (741)
T ss_pred HCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCCC-C--------HH---HHHHHHHHHh----------
Confidence 999999999999999999999999999999999999998754321 1 11 2222222111
Q ss_pred CCCccccCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEE-EEEE-ecCCceEEEEecCcHHHHHhhccc
Q 047874 419 LSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSG-VLMK-RINEKVFHTHWKGAAEMILVMCSH 496 (941)
Q Consensus 419 ~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~s-viv~-~~~~~~~~~~~KGa~e~i~~~c~~ 496 (941)
..+.||.++|+++++. +.+.+ +||.++++.+. .-++ ..++..+. .|+++.+.+
T Consensus 477 ----~~s~hPia~Ai~~~a~-~~~~~-------------~~~~~~~~~~~g~Gv~~~~~g~~~~---ig~~~~~~~---- 531 (741)
T PRK11033 477 ----QGSTHPLAQAIVREAQ-VRGLA-------------IPEAESQRALAGSGIEGQVNGERVL---ICAPGKLPP---- 531 (741)
T ss_pred ----cCCCCHHHHHHHHHHH-hcCCC-------------CCCCcceEEEeeEEEEEEECCEEEE---Eecchhhhh----
Confidence 1256999999999987 44432 34555555442 2222 22443333 478777633
Q ss_pred ccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCcchHHHHHHH
Q 047874 497 YYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESC 576 (941)
Q Consensus 497 ~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l 576 (941)
++ +.+.+..+++..+|++++++++ |.+++|+++++|++|++++++|++|
T Consensus 532 ----------~~----~~~~~~~~~~~~~g~~~v~va~-----------------~~~~~g~i~l~d~~r~~a~~~i~~L 580 (741)
T PRK11033 532 ----------LA----DAFAGQINELESAGKTVVLVLR-----------------NDDVLGLIALQDTLRADARQAISEL 580 (741)
T ss_pred ----------cc----HHHHHHHHHHHhCCCEEEEEEE-----------------CCEEEEEEEEecCCchhHHHHHHHH
Confidence 11 2234445678899999999986 4589999999999999999999999
Q ss_pred HhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHHHHHHHH
Q 047874 577 RNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLK 656 (941)
Q Consensus 577 ~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~ 656 (941)
+++|++++|+|||+..++.++|+++||. .+++..|++|.++|+.++
T Consensus 581 ~~~gi~~~llTGd~~~~a~~ia~~lgi~----------------------------------~~~~~~p~~K~~~v~~l~ 626 (741)
T PRK11033 581 KALGIKGVMLTGDNPRAAAAIAGELGID----------------------------------FRAGLLPEDKVKAVTELN 626 (741)
T ss_pred HHCCCEEEEEcCCCHHHHHHHHHHcCCC----------------------------------eecCCCHHHHHHHHHHHh
Confidence 9999999999999999999999999995 467789999999999999
Q ss_pred hCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 657 QKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVAA 736 (941)
Q Consensus 657 ~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~ 736 (941)
+. +.|+|+|||.||+|||++|||||||| ++++.++++||+++.++++.++.++++.||++++||++|+.|++.||+++
T Consensus 627 ~~-~~v~mvGDgiNDapAl~~A~vgia~g-~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~ 704 (741)
T PRK11033 627 QH-APLAMVGDGINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIF 704 (741)
T ss_pred cC-CCEEEEECCHHhHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65 58999999999999999999999999 89999999999999999999999999999999999999999999999988
Q ss_pred HHHHHH
Q 047874 737 LVINFG 742 (941)
Q Consensus 737 ~~~~~~ 742 (941)
+.+.++
T Consensus 705 i~~a~~ 710 (741)
T PRK11033 705 LVTTLL 710 (741)
T ss_pred HHHHHH
Confidence 776654
No 27
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=1.1e-72 Score=658.07 Aligned_cols=477 Identities=37% Similarity=0.567 Sum_probs=418.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhc-ccCCCeEEEEECCEEeeeecCCcccCcEEEEcCCCeeecceEEEecceEEEeecc
Q 047874 109 VFLVVSVSAVSNFKQSRQFQALAN-ESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSLKVDESS 187 (941)
Q Consensus 109 l~~~~~i~~~~~~~~~~~~~~l~~-~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~ 187 (941)
+++...++.+.+++.++..+++.+ ..++.+++|+|+| ++.|++++|+|||+|.+++||+|||||++++|++ .||||+
T Consensus 6 ~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~~-~vdes~ 83 (499)
T TIGR01494 6 VLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGSC-FVDESN 83 (499)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEccE-EEEccc
Confidence 445667778888888888888865 3577899999999 9999999999999999999999999999999975 999999
Q ss_pred CCCCCCceecCCCCCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhcccCCCCChhHHHHHHHH-HHHHHHHHHHHHH
Q 047874 188 MTGESDRVEVDEKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLT-SWIGKIGLTVAVL 266 (941)
Q Consensus 188 LTGEs~pv~k~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~ 266 (941)
|||||.|+.|.+++. +++||.+.+|...+.|+.+|.+|..+++...+......++++++..+++. .++.++.+.++++
T Consensus 84 LTGEs~pv~k~~g~~-v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~ 162 (499)
T TIGR01494 84 LTGESVPVLKTAGDA-VFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALA 162 (499)
T ss_pred ccCCCCCeeeccCCc-cccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998655 99999999999999999999999999999988877777899999999999 7887777777777
Q ss_pred HHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHhhhhhhccC
Q 047874 267 VLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRK 346 (941)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~ 346 (941)
+++.++..+. .. . ++...+..++++++++|||+|++++++++..+..+++++|+++|+
T Consensus 163 ~~~~~~~~~~-~~--~-------------------~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~ 220 (499)
T TIGR01494 163 VFLFWAIGLW-DP--N-------------------SIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRS 220 (499)
T ss_pred HHHHHHHHHc-cc--c-------------------cHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEec
Confidence 6666543210 00 0 255778899999999999999999999999999999999999999
Q ss_pred chhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccccchhhhhHHHHHHHHHHHhccCccccccCCCCCCccccC
Q 047874 347 LSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITG 426 (941)
Q Consensus 347 ~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (941)
++++|+||++|++|||||||||+|+|++.+++..+. ++.++
T Consensus 221 ~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~---------------------------------------~~~s~ 261 (499)
T TIGR01494 221 LNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG---------------------------------------EYLSG 261 (499)
T ss_pred hhhhhhccCCcEEEeeCCCccccCceEEEEEEecCC---------------------------------------CcCCC
Confidence 999999999999999999999999999999875321 12367
Q ss_pred CccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHhhcccccccCCeEee
Q 047874 427 SPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCSHYYVKSGTIRI 506 (941)
Q Consensus 427 ~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~ 506 (941)
||.|.|+++++. .. .+...||++.+++|+++++..++ .++||+++.+.+.|.+
T Consensus 262 hp~~~ai~~~~~-~~------------~~~~~~f~~~~~~~~~~~~~~~~----~~~~G~~~~i~~~~~~---------- 314 (499)
T TIGR01494 262 HPDERALVKSAK-WK------------ILNVFEFSSVRKRMSVIVRGPDG----TYVKGAPEFVLSRVKD---------- 314 (499)
T ss_pred ChHHHHHHHHhh-hc------------CcceeccCCCCceEEEEEecCCc----EEEeCCHHHHHHhhHH----------
Confidence 999999999886 21 12467999999999999875322 3689999999988852
Q ss_pred CCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEE
Q 047874 507 LDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMV 586 (941)
Q Consensus 507 l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~ 586 (941)
+.+..++++.+|+|++++|++. +++|++.++|++|++++++|+.|+++|++++|+
T Consensus 315 --------~~~~~~~~~~~g~~~~~~a~~~-----------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~l 369 (499)
T TIGR01494 315 --------LEEKVKELAQSGLRVLAVASKE-----------------TLLGLLGLEDPLRDDAKETISELREAGIRVIML 369 (499)
T ss_pred --------HHHHHHHHHhCCCEEEEEEECC-----------------eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEE
Confidence 1223345778999999999743 699999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEc
Q 047874 587 TGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTG 666 (941)
Q Consensus 587 TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iG 666 (941)
|||+..+|..+|+++|+ +++++|++|.++|+.+|+.|+.|+|+|
T Consensus 370 tGD~~~~a~~ia~~lgi------------------------------------~~~~~p~~K~~~v~~l~~~g~~v~~vG 413 (499)
T TIGR01494 370 TGDNVLTAKAIAKELGI------------------------------------FARVTPEEKAALVEALQKKGRVVAMTG 413 (499)
T ss_pred cCCCHHHHHHHHHHcCc------------------------------------eeccCHHHHHHHHHHHHHCCCEEEEEC
Confidence 99999999999999985 578999999999999999999999999
Q ss_pred CCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 667 DGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFGA 743 (941)
Q Consensus 667 Dg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~ 743 (941)
||.||+||+++|||||||+ ++++||+++.++++..+..++++||++++++++++.|.+++|++.+++++++
T Consensus 414 Dg~nD~~al~~Advgia~~------a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~ 484 (499)
T TIGR01494 414 DGVNDAPALKKADVGIAMG------AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAALL 484 (499)
T ss_pred CChhhHHHHHhCCCccccc------hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999997 6889999999999999999999999999999999999999999987777653
No 28
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-72 Score=637.34 Aligned_cols=563 Identities=25% Similarity=0.354 Sum_probs=439.6
Q ss_pred ccchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCE-EeeeecCCcccCcEEEEcCCCeeecceEE
Q 047874 98 GWFDGGSIIFAVFLV-VSVSAVSNFKQSRQFQALANESSDIRVEVVRDGR-RRGLSIFDVVVGEVVCLKTGDQIPADGLF 175 (941)
Q Consensus 98 ~~~~~~~i~~~l~~~-~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~-~~~i~~~~Lv~GDiI~l~~G~~iPaD~~l 175 (941)
.+||...+++.++.. -.++....++....+.+|... .+.++.++.+|+ +++|+.+.+++||+|.|.||++||+||++
T Consensus 339 tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl-~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~V 417 (951)
T KOG0207|consen 339 TFFDTSPMLITFITLGRWLESLAKGKTSEALSKLMSL-APSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVV 417 (951)
T ss_pred hhccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhc-CcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEE
Confidence 455555555444332 122222222333334444433 456888999886 88999999999999999999999999999
Q ss_pred EecceEEEeeccCCCCCCceecCCCCCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhcccCCCCChhHHHHHHHHHH
Q 047874 176 LNGHSLKVDESSMTGESDRVEVDEKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSW 255 (941)
Q Consensus 176 l~g~~l~Vdes~LTGEs~pv~k~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~ 255 (941)
++|++ +||||.+|||+.|+.|+.++ .+.+||.+..|.....++++|.+|.+++|.+.+.+++..++|.|+.+|+++.+
T Consensus 418 v~Gss-~VDEs~iTGEs~PV~Kk~gs-~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~y 495 (951)
T KOG0207|consen 418 VDGSS-EVDESLITGESMPVPKKKGS-TVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGY 495 (951)
T ss_pred EeCce-eechhhccCCceecccCCCC-eeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhc
Confidence 99998 99999999999999999865 49999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHH
Q 047874 256 IGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMK 335 (941)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~L~~~~~~~~~~~~~ 335 (941)
+.+.+++++++++++|++..... ..+ ... +...+..+|..++++++++|||+|.++.|++...+..
T Consensus 496 FvP~Vi~lS~~t~~~w~~~g~~~---~~~-~~~----------~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatg 561 (951)
T KOG0207|consen 496 FVPVVIVLSLATFVVWILIGKIV---FKY-PRS----------FFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATG 561 (951)
T ss_pred CCchhhHHHHHHHHHHHHHcccc---ccC-cch----------hhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEec
Confidence 99999999999999876532211 000 011 1136778899999999999999999999999999999
Q ss_pred HHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccccchhhhhHHHHHHHHHHHhccCcccccc
Q 047874 336 RMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYN 415 (941)
Q Consensus 336 ~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 415 (941)
..+++|+++|..+.+|.+.++++|+||||||||+|++.|.++....+... ..+.+....+..
T Consensus 562 vgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~~~-----------~~e~l~~v~a~E------- 623 (951)
T KOG0207|consen 562 VGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNPIS-----------LKEALALVAAME------- 623 (951)
T ss_pred hhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCccc-----------HHHHHHHHHHHh-------
Confidence 99999999999999999999999999999999999999999877654311 112222222111
Q ss_pred CCCCCCccccCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHhhcc
Q 047874 416 SNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCS 495 (941)
Q Consensus 416 ~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~c~ 495 (941)
..+.||..+|+++|++ +..... ..-..+....|..+.....+.+ ++.+ .+-|.-+.+...-.
T Consensus 624 -------s~SeHPig~AIv~yak-~~~~~~----~~~~~~~~~~~pg~g~~~~~~~---~~~~---i~iGN~~~~~r~~~ 685 (951)
T KOG0207|consen 624 -------SGSEHPIGKAIVDYAK-EKLVEP----NPEGVLSFEYFPGEGIYVTVTV---DGNE---VLIGNKEWMSRNGC 685 (951)
T ss_pred -------cCCcCchHHHHHHHHH-hccccc----CccccceeecccCCCcccceEE---eeeE---EeechHHHHHhcCC
Confidence 1256999999999998 443111 1111222222322222211221 2222 34588777754221
Q ss_pred cccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCcchHHHHHH
Q 047874 496 HYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVES 575 (941)
Q Consensus 496 ~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~ 575 (941)
. ..+.+++..++..+.|..+..++. |-++.|++.++|++|+|+..+|+.
T Consensus 686 ~--------------~~~~i~~~~~~~e~~g~tvv~v~v-----------------n~~l~gv~~l~D~vr~~a~~av~~ 734 (951)
T KOG0207|consen 686 S--------------IPDDILDALTESERKGQTVVYVAV-----------------NGQLVGVFALEDQVRPDAALAVAE 734 (951)
T ss_pred C--------------CchhHHHhhhhHhhcCceEEEEEE-----------------CCEEEEEEEeccccchhHHHHHHH
Confidence 1 123467777788889998888876 568999999999999999999999
Q ss_pred HHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHHHHHHH
Q 047874 576 CRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSL 655 (941)
Q Consensus 576 l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l 655 (941)
||+.|++++|+||||..+|+++|+++|++. |+++..|+||.+.|+.+
T Consensus 735 Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~~---------------------------------V~aev~P~~K~~~Ik~l 781 (951)
T KOG0207|consen 735 LKSMGIKVVMLTGDNDAAARSVAQQVGIDN---------------------------------VYAEVLPEQKAEKIKEI 781 (951)
T ss_pred HHhcCceEEEEcCCCHHHHHHHHHhhCcce---------------------------------EEeccCchhhHHHHHHH
Confidence 999999999999999999999999999764 99999999999999999
Q ss_pred HhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 656 KQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVA 735 (941)
Q Consensus 656 ~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~ 735 (941)
|+++..|+|+|||.||+|+|.+|||||+|| .+++.|.++||+++++|++.+++.+|..+|++.+|+|.|+.|++.||+.
T Consensus 782 q~~~~~VaMVGDGINDaPALA~AdVGIaig-~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~ 860 (951)
T KOG0207|consen 782 QKNGGPVAMVGDGINDAPALAQADVGIAIG-AGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLV 860 (951)
T ss_pred HhcCCcEEEEeCCCCccHHHHhhccceeec-cccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999 8899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcC--CCchhHHHHHHHHhhhhHHHHHHhcc-cCCC
Q 047874 736 ALVINFGAAVSSG--KVPLTAVQLLWVNLIMDTLGALALAT-EQPT 778 (941)
Q Consensus 736 ~~~~~~~~~~~~~--~~~l~~~~~l~~~~~~~~~~~~~l~~-~~~~ 778 (941)
.++++.+.++..+ -+|.-+.-.+..+.+...+.++.|-. .+|.
T Consensus 861 ~IpIAagvF~P~~~~L~Pw~A~lama~SSvsVv~sSllLk~~k~p~ 906 (951)
T KOG0207|consen 861 GIPIAAGVFAPFGIVLPPWMASLAMAASSVSVVLSSLLLKRYKKPT 906 (951)
T ss_pred hhhhheecccCCccccCchHHHHHHHhhhHHHhhhHHHHhhccccc
Confidence 9988877665555 12222223333344444444444433 4443
No 29
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=5.4e-71 Score=649.38 Aligned_cols=525 Identities=28% Similarity=0.427 Sum_probs=427.0
Q ss_pred HHHHHHHHhhhcccccCCcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEECC-EEeeeecCCcc
Q 047874 78 LLVCALLSLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRDG-RRRGLSIFDVV 156 (941)
Q Consensus 78 lli~~~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g-~~~~i~~~~Lv 156 (941)
..++++++++.+ .|.++..+++.+++.-.++..++++.++..+++.+. ++.+++|+||| +++++++++|+
T Consensus 5 ~~~~~~~~~~~~--------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~-~~~~~~v~r~~g~~~~i~~~~l~ 75 (556)
T TIGR01525 5 MALATIAAYAMG--------LVLEGALLLFLFLLGETLEERAKGRASDALSALLAL-APSTARVLQGDGSEEEVPVEELQ 75 (556)
T ss_pred HHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEEECCCeEEEEEHHHCC
Confidence 344445555554 466666666666667677777777777777777643 56789999996 99999999999
Q ss_pred cCcEEEEcCCCeeecceEEEecceEEEeeccCCCCCCceecCCCCCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhc
Q 047874 157 VGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESDRVEVDEKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSIS 236 (941)
Q Consensus 157 ~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~ 236 (941)
|||+|.+++||+|||||++++|+. .||||+|||||.|+.|.+++ .+|+||.+.+|.++++|+++|.+|++|++.+.+.
T Consensus 76 ~GDiv~v~~G~~iP~Dg~vi~g~~-~vdes~lTGEs~pv~k~~g~-~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~ 153 (556)
T TIGR01525 76 VGDIVIVRPGERIPVDGVVISGES-EVDESALTGESMPVEKKEGD-EVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVE 153 (556)
T ss_pred CCCEEEECCCCEeccceEEEecce-EEeehhccCCCCCEecCCcC-EEeeceEECCceEEEEEEEecccCHHHHHHHHHH
Confidence 999999999999999999999986 99999999999999999864 5999999999999999999999999999999998
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHH
Q 047874 237 HELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVV 316 (941)
Q Consensus 237 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~ 316 (941)
+...+++|+++.+++++.++.++++.++++++++++. .+. . ..+..+++++++
T Consensus 154 ~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~---~~~----------------------~--~~~~~~~~vlv~ 206 (556)
T TIGR01525 154 EAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLA---LGA----------------------L--GALYRALAVLVV 206 (556)
T ss_pred HHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcc----------------------c--hHHHHHHHHHhh
Confidence 8888899999999999999999988888888776532 111 1 457789999999
Q ss_pred HcCCchhHHHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccccchhhhhHH
Q 047874 317 AIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQN 396 (941)
Q Consensus 317 ~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 396 (941)
+|||+|++++++++..+..++.++|+++|+++++|+||++|++|||||||||+|+|+|.+++..+.... ..+
T Consensus 207 ~~P~al~l~~~~~~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~-------~~~- 278 (556)
T TIGR01525 207 ACPCALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDASI-------SEE- 278 (556)
T ss_pred ccccchhehhHHHHHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCCc-------cHH-
Confidence 999999999999999999999999999999999999999999999999999999999999876543210 011
Q ss_pred HHHHHHHHHhccCccccccCCCCCCccccCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEEEEEEecCC
Q 047874 397 LYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINE 476 (941)
Q Consensus 397 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~ 476 (941)
+.+..+..+. ..+.||.+.|+++++. +.+.+... . + ....+ +.+ .....+ ++
T Consensus 279 --~~l~~a~~~e--------------~~~~hp~~~Ai~~~~~-~~~~~~~~--~-~-~~~~~---~~~-gi~~~~---~g 330 (556)
T TIGR01525 279 --ELLALAAALE--------------QSSSHPLARAIVRYAK-KRGLELPK--Q-E-DVEEV---PGK-GVEATV---DG 330 (556)
T ss_pred --HHHHHHHHHh--------------ccCCChHHHHHHHHHH-hcCCCccc--c-c-CeeEe---cCC-eEEEEE---CC
Confidence 2222221111 1256999999999998 55543221 0 0 11111 111 111111 22
Q ss_pred ceEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccchhhhhccCcEEE
Q 047874 477 KVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLL 556 (941)
Q Consensus 477 ~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~l 556 (941)
. ..+..|+++.+ + .. +. + ....++..+++.++|++++.++. |.+++
T Consensus 331 ~--~~~~lg~~~~~-~-~~------~~----~---~~~~~~~~~~~~~~g~~~~~v~~-----------------~~~~~ 376 (556)
T TIGR01525 331 Q--EEVRIGNPRLL-E-LA------AE----P---ISASPDLLNEGESQGKTVVFVAV-----------------DGELL 376 (556)
T ss_pred e--eEEEEecHHHH-h-hc------CC----C---chhhHHHHHHHhhCCcEEEEEEE-----------------CCEEE
Confidence 1 12234777655 1 11 00 0 11123445667889999998885 45899
Q ss_pred EEEeccCCCCcchHHHHHHHHhcC-CeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhc
Q 047874 557 GLVGLKDPCRPGVRAAVESCRNAG-VNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIE 635 (941)
Q Consensus 557 G~i~~~d~~~~~~~~~I~~l~~aG-i~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 635 (941)
|.+.++|+++|+++++|+.|+++| ++++|+|||+..++..+++++|+..
T Consensus 377 g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~------------------------------ 426 (556)
T TIGR01525 377 GVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE------------------------------ 426 (556)
T ss_pred EEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe------------------------------
Confidence 999999999999999999999999 9999999999999999999999964
Q ss_pred CceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHH
Q 047874 636 SIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWG 715 (941)
Q Consensus 636 ~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~g 715 (941)
+|+++.|++|.++++.+++.++.|+|+|||.||++|+++||+||++| ++.+.+++.||+++.+++++.+.++++.|
T Consensus 427 ---~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~ 502 (556)
T TIGR01525 427 ---VHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLS 502 (556)
T ss_pred ---eeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999 89999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 716 RCVYNNIQKFLQFQLTVNVAALVINFGAA 744 (941)
Q Consensus 716 R~~~~~i~~~i~~~l~~n~~~~~~~~~~~ 744 (941)
|++++|+++++.|++.+|++.+++++++.
T Consensus 503 r~~~~~i~~nl~~a~~~N~~~i~~a~~g~ 531 (556)
T TIGR01525 503 RKTRRIIKQNLAWALGYNLVAIPLAAGGL 531 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999887766543
No 30
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=1.5e-70 Score=641.11 Aligned_cols=505 Identities=25% Similarity=0.379 Sum_probs=419.1
Q ss_pred HHHHHHHHHhhhcccccCCcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCEEeeeecCCcc
Q 047874 77 ILLVCALLSLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVV 156 (941)
Q Consensus 77 ~lli~~~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv 156 (941)
+++++++++++.+ .|+++..+++.+++...++.+++++.++..+++.+. ++.+++|+|||+++++++++|+
T Consensus 4 l~~~a~~~~~~~~--------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~-~~~~~~v~r~g~~~~i~~~~l~ 74 (536)
T TIGR01512 4 LMALAALGAVAIG--------EYLEGALLLLLFSIGETLEEYASGRARRALKALMEL-APDTARVLRGGSLEEVAVEELK 74 (536)
T ss_pred HHHHHHHHHHHHh--------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEEECCEEEEEEHHHCC
Confidence 4455666666664 588887777777677778888888888888888754 5678999999999999999999
Q ss_pred cCcEEEEcCCCeeecceEEEecceEEEeeccCCCCCCceecCCCCCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhc
Q 047874 157 VGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESDRVEVDEKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSIS 236 (941)
Q Consensus 157 ~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~ 236 (941)
|||+|.+++||+|||||++++|+. .||||+|||||.|+.|.+++ .+|+||.+.+|.++++|++||.+|.+|++.+.+.
T Consensus 75 ~GDiv~v~~G~~iP~Dg~ii~g~~-~vdes~lTGEs~pv~k~~g~-~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~ 152 (536)
T TIGR01512 75 VGDVVVVKPGERVPVDGVVLSGTS-TVDESALTGESVPVEKAPGD-EVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVE 152 (536)
T ss_pred CCCEEEEcCCCEeecceEEEeCcE-EEEecccCCCCCcEEeCCCC-EEEeeeEECCceEEEEEEEeccccHHHHHHHHHH
Confidence 999999999999999999999987 99999999999999999865 5999999999999999999999999999999998
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHH
Q 047874 237 HELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVV 316 (941)
Q Consensus 237 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~ 316 (941)
+...+++|+++.+++++.++.++++.++++.++++. +.+. +...+..+++++++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-----------------------~~~~~~~~~svlv~ 206 (536)
T TIGR01512 153 EAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPG---LLKR-----------------------WPFWVYRALVLLVV 206 (536)
T ss_pred HHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH---Hhcc-----------------------cHHHHHHHHHHHhh
Confidence 888889999999999999999988887776665532 2211 11267788999999
Q ss_pred HcCCchhHHHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccccchhhhhHH
Q 047874 317 AIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQN 396 (941)
Q Consensus 317 ~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 396 (941)
+|||+|++++++++..+..++.++|+++|+++++|++|++|++|||||||||+|+|+|.+++..
T Consensus 207 ~~P~aL~la~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~---------------- 270 (536)
T TIGR01512 207 ASPCALVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA---------------- 270 (536)
T ss_pred cCccccccchHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH----------------
Confidence 9999999999999999999999999999999999999999999999999999999999987531
Q ss_pred HHHHHHHHHhccCccccccCCCCCCccccCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEEEEEEecCC
Q 047874 397 LYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINE 476 (941)
Q Consensus 397 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~ 476 (941)
+.+..+.++. ..+.||.+.|++++++ +.+ ++ ......| .+ ++... .++
T Consensus 271 --~~l~~a~~~e--------------~~~~hp~~~Ai~~~~~-~~~-~~-------~~~~~~~---g~---gi~~~-~~g 318 (536)
T TIGR01512 271 --EVLRLAAAAE--------------QASSHPLARAIVDYAR-KRE-NV-------ESVEEVP---GE---GVRAV-VDG 318 (536)
T ss_pred --HHHHHHHHHh--------------ccCCCcHHHHHHHHHH-hcC-CC-------cceEEec---CC---eEEEE-ECC
Confidence 2232222111 1256999999999987 332 11 1111111 11 22111 233
Q ss_pred ceEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccchhhhhccCcEEE
Q 047874 477 KVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLL 556 (941)
Q Consensus 477 ~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~l 556 (941)
.++ ..|+++.+.+... ..+..+|.+++.++. |..+.
T Consensus 319 ~~~---~ig~~~~~~~~~~------------------------~~~~~~~~~~~~v~~-----------------~~~~~ 354 (536)
T TIGR01512 319 GEV---RIGNPRSLEAAVG------------------------ARPESAGKTIVHVAR-----------------DGTYL 354 (536)
T ss_pred eEE---EEcCHHHHhhcCC------------------------cchhhCCCeEEEEEE-----------------CCEEE
Confidence 333 3477765532110 034456766655543 56899
Q ss_pred EEEeccCCCCcchHHHHHHHHhcCC-eEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhc
Q 047874 557 GLVGLKDPCRPGVRAAVESCRNAGV-NVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIE 635 (941)
Q Consensus 557 G~i~~~d~~~~~~~~~I~~l~~aGi-~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 635 (941)
|.+.++|+++|+++++|++|+++|+ +++|+|||+..++..+++++|+..
T Consensus 355 g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~------------------------------ 404 (536)
T TIGR01512 355 GYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE------------------------------ 404 (536)
T ss_pred EEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh------------------------------
Confidence 9999999999999999999999999 999999999999999999999964
Q ss_pred CceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHH
Q 047874 636 SIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWG 715 (941)
Q Consensus 636 ~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~g 715 (941)
+|++..|++|.++++.++++++.|+|+|||.||++|+++||+||++|.++++.+++.||+++.++++..+.++++.|
T Consensus 405 ---~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~ 481 (536)
T TIGR01512 405 ---VHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLA 481 (536)
T ss_pred ---hhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHHHH
Confidence 68888999999999999999999999999999999999999999999668899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 716 RCVYNNIQKFLQFQLTVNVAALVINFGA 743 (941)
Q Consensus 716 R~~~~~i~~~i~~~l~~n~~~~~~~~~~ 743 (941)
|++++++++++.|++.+|++.+++.+++
T Consensus 482 r~~~~~i~~nl~~a~~~n~~~i~~a~~G 509 (536)
T TIGR01512 482 RRTRRIVKQNVVIALGIILLLILLALFG 509 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999888776643
No 31
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=6.7e-70 Score=637.35 Aligned_cols=500 Identities=28% Similarity=0.406 Sum_probs=408.3
Q ss_pred ccchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcccCCCeEEEEEC-CEEeeeecCCcccCcEEEEcCCCeeecceEE
Q 047874 98 GWFDGGSIIFAVFLV-VSVSAVSNFKQSRQFQALANESSDIRVEVVRD-GRRRGLSIFDVVVGEVVCLKTGDQIPADGLF 175 (941)
Q Consensus 98 ~~~~~~~i~~~l~~~-~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~-g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~l 175 (941)
.||+...+++.+++. -.++...+.+.++..+++.+. .+.+++++|+ |++++|++++|+|||+|+|++||+|||||++
T Consensus 52 ~~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~-~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v 130 (562)
T TIGR01511 52 TFFDASAMLITFILLGRWLEMLAKGRASDALSKLAKL-QPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTV 130 (562)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEE
Confidence 466766555444332 244555555566666666643 4678889885 6779999999999999999999999999999
Q ss_pred EecceEEEeeccCCCCCCceecCCCCCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhcccCCCCChhHHHHHHHHHH
Q 047874 176 LNGHSLKVDESSMTGESDRVEVDEKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSW 255 (941)
Q Consensus 176 l~g~~l~Vdes~LTGEs~pv~k~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~ 255 (941)
++|++ .||||+|||||.|+.|.+++ .+|+||.+.+|.++++|+++|.+|.+||+.+.+.+++.+++|+++..++++.+
T Consensus 131 ~~g~~-~vdes~lTGEs~pv~k~~gd-~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~ 208 (562)
T TIGR01511 131 IEGES-EVDESLVTGESLPVPKKVGD-PVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGY 208 (562)
T ss_pred EECce-EEehHhhcCCCCcEEcCCCC-EEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHH
Confidence 99987 89999999999999999875 59999999999999999999999999999999999888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHH
Q 047874 256 IGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMK 335 (941)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~L~~~~~~~~~~~~~ 335 (941)
++++++.++++++++|. ..+..++++++++|||+|++++|+++..+..
T Consensus 209 ~~~~v~~~a~~~~~~~~--------------------------------~~~~~~~svlvvacPcaL~la~p~a~~~~~~ 256 (562)
T TIGR01511 209 FVPVVIAIALITFVIWL--------------------------------FALEFAVTVLIIACPCALGLATPTVIAVATG 256 (562)
T ss_pred HHHHHHHHHHHHHHHHH--------------------------------HHHHHHHHHHHHhccchhhhHHHHHHHHHHH
Confidence 99988888777665532 2466789999999999999999999999999
Q ss_pred HHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccccchhhhhHHHHHHHHHHHhccCcccccc
Q 047874 336 RMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYN 415 (941)
Q Consensus 336 ~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 415 (941)
+++++|+++|+.+++|+|+++|++|||||||||+|+|++.++...+.. + .+ +.+..+.+++.
T Consensus 257 ~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~-~--------~~---~~l~~aa~~e~------ 318 (562)
T TIGR01511 257 LAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDR-D--------RT---ELLALAAALEA------ 318 (562)
T ss_pred HHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCC-C--------HH---HHHHHHHHHhc------
Confidence 999999999999999999999999999999999999999998754321 0 11 22333322221
Q ss_pred CCCCCCccccCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHhhcc
Q 047874 416 SNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCS 495 (941)
Q Consensus 416 ~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~c~ 495 (941)
.+.||.++|++++++ +.+.+.... ......| ..++.... ++.++ ..|+++.+.+...
T Consensus 319 --------~s~HPia~Ai~~~~~-~~~~~~~~~----~~~~~~~------g~Gi~~~~-~g~~~---~iG~~~~~~~~~~ 375 (562)
T TIGR01511 319 --------GSEHPLAKAIVSYAK-EKGITLVEV----SDFKAIP------GIGVEGTV-EGTKI---QLGNEKLLGENAI 375 (562)
T ss_pred --------cCCChHHHHHHHHHH-hcCCCcCCC----CCeEEEC------CceEEEEE-CCEEE---EEECHHHHHhCCC
Confidence 246999999999987 554432111 1111111 12222222 33333 4588887643211
Q ss_pred cccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCcchHHHHHH
Q 047874 496 HYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVES 575 (941)
Q Consensus 496 ~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~ 575 (941)
.++ ++.++|.+++.++. |.+++|++.++|++||+++++|++
T Consensus 376 ----------~~~------------~~~~~g~~~~~~~~-----------------~~~~~g~~~~~d~l~~~a~e~i~~ 416 (562)
T TIGR01511 376 ----------KID------------GKAEQGSTSVLVAV-----------------NGELAGVFALEDQLRPEAKEVIQA 416 (562)
T ss_pred ----------CCC------------hhhhCCCEEEEEEE-----------------CCEEEEEEEecccccHHHHHHHHH
Confidence 011 12357888776654 568999999999999999999999
Q ss_pred HHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHHHHHHH
Q 047874 576 CRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSL 655 (941)
Q Consensus 576 l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l 655 (941)
|++.|++++|+|||+..++..+++++|++ ++++..|++|.++++.+
T Consensus 417 Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~----------------------------------~~~~~~p~~K~~~v~~l 462 (562)
T TIGR01511 417 LKRRGIEPVMLTGDNRKTAKAVAKELGIN----------------------------------VRAEVLPDDKAALIKEL 462 (562)
T ss_pred HHHcCCeEEEEcCCCHHHHHHHHHHcCCc----------------------------------EEccCChHHHHHHHHHH
Confidence 99999999999999999999999999994 57888999999999999
Q ss_pred HhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 656 KQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVA 735 (941)
Q Consensus 656 ~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~ 735 (941)
+++++.|+|+|||.||++|+++||+||+|| ++++.+++.||+++.++++..+.++++.||++++++++++.|++.+|++
T Consensus 463 ~~~~~~v~~VGDg~nD~~al~~A~vgia~g-~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~ 541 (562)
T TIGR01511 463 QEKGRVVAMVGDGINDAPALAQADVGIAIG-AGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVI 541 (562)
T ss_pred HHcCCEEEEEeCCCccHHHHhhCCEEEEeC-CcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999 7899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhc
Q 047874 736 ALVINFGAAVSS 747 (941)
Q Consensus 736 ~~~~~~~~~~~~ 747 (941)
.+++++++.+..
T Consensus 542 ~i~la~~~~~~~ 553 (562)
T TIGR01511 542 AIPIAAGVLYPI 553 (562)
T ss_pred HHHHHHhhhhcc
Confidence 887776554433
No 32
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=3.9e-69 Score=661.49 Aligned_cols=510 Identities=26% Similarity=0.367 Sum_probs=417.1
Q ss_pred ccchhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCEEeeeecCCcccCcEEEEcCCCeeecceEEE
Q 047874 98 GWFDGGSIIFAV-FLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFL 176 (941)
Q Consensus 98 ~~~~~~~i~~~l-~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll 176 (941)
.||+...+++.+ .+.-.++...+.+..+..+++.+. .+.+++|+|+|++++|+.++|+|||+|+|++||+|||||+|+
T Consensus 284 ~~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l-~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~ 362 (834)
T PRK10671 284 LYYEASAMIIGLINLGHMLEARARQRSSKALEKLLDL-TPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEIT 362 (834)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEE
Confidence 366654444332 223344444444555555566543 467899999999999999999999999999999999999999
Q ss_pred ecceEEEeeccCCCCCCceecCCCCCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhcccCCCCChhHHHHHHHHHHH
Q 047874 177 NGHSLKVDESSMTGESDRVEVDEKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSWI 256 (941)
Q Consensus 177 ~g~~l~Vdes~LTGEs~pv~k~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~ 256 (941)
+|+. .||||+|||||.|+.|.+++ .+|+||.+.+|.+.++|+++|.+|.+|++.+.+.+++..++|+++..++++.++
T Consensus 363 ~g~~-~vdeS~lTGEs~pv~k~~gd-~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~ 440 (834)
T PRK10671 363 QGEA-WLDEAMLTGEPIPQQKGEGD-SVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVF 440 (834)
T ss_pred EceE-EEeehhhcCCCCCEecCCCC-EEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHH
Confidence 9976 99999999999999999875 599999999999999999999999999999999988888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHH
Q 047874 257 GKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKR 336 (941)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~L~~~~~~~~~~~~~~ 336 (941)
+++++.++++++++|++ .+.. ..+...+..++++++++|||+|++++|+++..+..+
T Consensus 441 v~~v~~~a~~~~~~~~~---~~~~--------------------~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~ 497 (834)
T PRK10671 441 VPVVVVIALVSAAIWYF---FGPA--------------------PQIVYTLVIATTVLIIACPCALGLATPMSIISGVGR 497 (834)
T ss_pred HHHHHHHHHHHHHHHHH---hCCc--------------------hHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHH
Confidence 99998888877776532 2210 024456778999999999999999999999999999
Q ss_pred HhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccccchhhhhHHHHHHHHHHHhccCccccccC
Q 047874 337 MMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNS 416 (941)
Q Consensus 337 l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 416 (941)
++|+|+++|+.+++|+++++|++|||||||||+|+|+|.++...+.. + + .+.+..+.++++
T Consensus 498 ~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~-~---------~--~~~l~~a~~~e~------- 558 (834)
T PRK10671 498 AAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGV-D---------E--AQALRLAAALEQ------- 558 (834)
T ss_pred HHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCCC-C---------H--HHHHHHHHHHhC-------
Confidence 99999999999999999999999999999999999999988653321 0 0 123333333322
Q ss_pred CCCCCccccCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHhhccc
Q 047874 417 NSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCSH 496 (941)
Q Consensus 417 ~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~c~~ 496 (941)
.+.||.++|+++++. .... .. ..+|+...+ .++... .++. .+.+|+++.+.+..
T Consensus 559 -------~s~hp~a~Ai~~~~~-~~~~--~~---------~~~~~~~~g-~Gv~~~-~~g~---~~~~G~~~~~~~~~-- 612 (834)
T PRK10671 559 -------GSSHPLARAILDKAG-DMTL--PQ---------VNGFRTLRG-LGVSGE-AEGH---ALLLGNQALLNEQQ-- 612 (834)
T ss_pred -------CCCCHHHHHHHHHHh-hCCC--CC---------cccceEecc-eEEEEE-ECCE---EEEEeCHHHHHHcC--
Confidence 256999999999876 3211 10 112222221 222221 2343 23569999774321
Q ss_pred ccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCcchHHHHHHH
Q 047874 497 YYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESC 576 (941)
Q Consensus 497 ~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l 576 (941)
++ .+.+.+..+++.++|.+++.+++ |..++|++.++|++||+++++|++|
T Consensus 613 ----------~~---~~~~~~~~~~~~~~g~~~v~va~-----------------~~~~~g~~~l~d~~r~~a~~~i~~L 662 (834)
T PRK10671 613 ----------VD---TKALEAEITAQASQGATPVLLAV-----------------DGKAAALLAIRDPLRSDSVAALQRL 662 (834)
T ss_pred ----------CC---hHHHHHHHHHHHhCCCeEEEEEE-----------------CCEEEEEEEccCcchhhHHHHHHHH
Confidence 11 12345556677889999998886 3468999999999999999999999
Q ss_pred HhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHHHHHHHH
Q 047874 577 RNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLK 656 (941)
Q Consensus 577 ~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~ 656 (941)
++.|++++|+|||+..++..+++++|+.. ++++..|++|.++++.++
T Consensus 663 ~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~---------------------------------~~~~~~p~~K~~~i~~l~ 709 (834)
T PRK10671 663 HKAGYRLVMLTGDNPTTANAIAKEAGIDE---------------------------------VIAGVLPDGKAEAIKRLQ 709 (834)
T ss_pred HHCCCeEEEEcCCCHHHHHHHHHHcCCCE---------------------------------EEeCCCHHHHHHHHHHHh
Confidence 99999999999999999999999999964 789999999999999999
Q ss_pred hCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 657 QKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVAA 736 (941)
Q Consensus 657 ~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~ 736 (941)
++++.|+|+|||.||++|+++||+||+|| ++++.++++||+++.++++.++.++++.||+++.++++|+.|++.||++.
T Consensus 710 ~~~~~v~~vGDg~nD~~al~~Agvgia~g-~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~ 788 (834)
T PRK10671 710 SQGRQVAMVGDGINDAPALAQADVGIAMG-GGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLG 788 (834)
T ss_pred hcCCEEEEEeCCHHHHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 89999999999999999999999999999999999999999999999998
Q ss_pred HHHHHH
Q 047874 737 LVINFG 742 (941)
Q Consensus 737 ~~~~~~ 742 (941)
+.++++
T Consensus 789 i~~a~g 794 (834)
T PRK10671 789 IPIAAG 794 (834)
T ss_pred HHHHHh
Confidence 887763
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-57 Score=478.59 Aligned_cols=499 Identities=27% Similarity=0.395 Sum_probs=388.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEC-CEEeeeecCCcccCcEEEEcCCCeeecceEEEecceEEEeeccCC
Q 047874 111 LVVSVSAVSNFKQSRQFQALANESSDIRVEVVRD-GRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSLKVDESSMT 189 (941)
Q Consensus 111 ~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~-g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~LT 189 (941)
+..+.+++.|.+-+.+-..|++......++++++ |.++.+++.+|+.||+|+++.||.||+||.+++|.+ +||||++|
T Consensus 78 FANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~a-sVdESAIT 156 (681)
T COG2216 78 FANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDESAIT 156 (681)
T ss_pred HHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeeee-ecchhhcc
Confidence 3334456666665555556655444456777775 899999999999999999999999999999999998 99999999
Q ss_pred CCCCceecCCCCC--eEeeccEEeeeeEEEEEEEEcccChhhHHHHhhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 047874 190 GESDRVEVDEKNP--FLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSWIGKIGLTVAVLV 267 (941)
Q Consensus 190 GEs~pv~k~~~~~--~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 267 (941)
|||.|+-|+.+++ -+-.||.+.+.+.+.++++...+|.+.|+...+..+..++||.+-.++-+..-+..+.+ +++
T Consensus 157 GESaPViresGgD~ssVtGgT~v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTliFL---~~~ 233 (681)
T COG2216 157 GESAPVIRESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTLIFL---LAV 233 (681)
T ss_pred CCCcceeeccCCCcccccCCcEEeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHHHH---HHH
Confidence 9999999997643 28899999999999999999999999999999999999999988766544332222111 111
Q ss_pred HHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHhhhhhhccCc
Q 047874 268 LAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKL 347 (941)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~ 347 (941)
...+.+..+.+. . . -.+...++++++.+|..+.-.++-.=..++.|+.+.+++.++.
T Consensus 234 ~Tl~p~a~y~~g------------~---------~--~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SG 290 (681)
T COG2216 234 ATLYPFAIYSGG------------G---------A--ASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSG 290 (681)
T ss_pred HhhhhHHHHcCC------------C---------C--cCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCc
Confidence 111111111110 0 0 1234567889999999988888877778999999999999999
Q ss_pred hhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccccchhhhhHHHHHHHHHHHhccCccccccCCCCCCccccCC
Q 047874 348 SACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGS 427 (941)
Q Consensus 348 ~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (941)
.++|..|.+|++..|||||+|-|+-.-.+++..+.... +.+..++.+++- .+ .-
T Consensus 291 RAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~gv~~-------------~~la~aa~lsSl---~D----------eT 344 (681)
T COG2216 291 RAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVPGVSE-------------EELADAAQLASL---AD----------ET 344 (681)
T ss_pred chhhhcCCccEEEecccCceeecchhhhheecCCCCCH-------------HHHHHHHHHhhh---cc----------CC
Confidence 99999999999999999999999887777776554221 112223223321 11 13
Q ss_pred ccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHhhcccccccCCeEeeC
Q 047874 428 PTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCSHYYVKSGTIRIL 507 (941)
Q Consensus 428 p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l 507 (941)
|.-+++++.++ +.+.+.+.....- .....||+.+.+.+++-.. ++ +-.-|||.+.+....+.. +|
T Consensus 345 pEGrSIV~LA~-~~~~~~~~~~~~~-~~~fvpFtA~TRmSGvd~~---~~--~~irKGA~dai~~~v~~~---~g----- 409 (681)
T COG2216 345 PEGRSIVELAK-KLGIELREDDLQS-HAEFVPFTAQTRMSGVDLP---GG--REIRKGAVDAIRRYVRER---GG----- 409 (681)
T ss_pred CCcccHHHHHH-HhccCCCcccccc-cceeeecceecccccccCC---CC--ceeecccHHHHHHHHHhc---CC-----
Confidence 56678899888 6665544332211 3456799888777666543 22 345799999998876521 11
Q ss_pred CHHHHHHHHHHHHHHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEc
Q 047874 508 DGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVT 587 (941)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~T 587 (941)
..++.++...++-++.|-..++++. |-.++|++.++|-++++.+|-+.+||+.|||.+|+|
T Consensus 410 --~~p~~l~~~~~~vs~~GGTPL~V~~-----------------~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~T 470 (681)
T COG2216 410 --HIPEDLDAAVDEVSRLGGTPLVVVE-----------------NGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMIT 470 (681)
T ss_pred --CCCHHHHHHHHHHHhcCCCceEEEE-----------------CCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEe
Confidence 1245677778888899988888874 558999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcC
Q 047874 588 GDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGD 667 (941)
Q Consensus 588 Gd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGD 667 (941)
|||+.||..+|++.|++. ..++++|++|.+.++.-|.+|+-|+|+||
T Consensus 471 GDN~~TAa~IA~EAGVDd---------------------------------fiAeatPEdK~~~I~~eQ~~grlVAMtGD 517 (681)
T COG2216 471 GDNPLTAAAIAAEAGVDD---------------------------------FIAEATPEDKLALIRQEQAEGRLVAMTGD 517 (681)
T ss_pred CCCHHHHHHHHHHhCchh---------------------------------hhhcCChHHHHHHHHHHHhcCcEEEEcCC
Confidence 999999999999999986 68999999999999999999999999999
Q ss_pred CccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 668 GTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQL 730 (941)
Q Consensus 668 g~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l 730 (941)
|.||+|+|.+||||+||. +|+..|||++.++=.|.+...+.+.++.|++..-.=-....|++
T Consensus 518 GTNDAPALAqAdVg~AMN-sGTqAAkEAaNMVDLDS~PTKlievV~IGKqlLiTRGaLTTFSI 579 (681)
T COG2216 518 GTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLLITRGALTTFSI 579 (681)
T ss_pred CCCcchhhhhcchhhhhc-cccHHHHHhhcccccCCCccceehHhhhhhhheeecccceeeeh
Confidence 999999999999999999 99999999999999999999999999999987643333333443
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=100.00 E-value=2e-33 Score=295.43 Aligned_cols=224 Identities=32% Similarity=0.574 Sum_probs=189.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCEEeeeecCCcccCcEEEEcCCCeeecceEEEe-cceEEE
Q 047874 105 IIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLN-GHSLKV 183 (941)
Q Consensus 105 i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~-g~~l~V 183 (941)
+++.+++..+++.+++++.++..+++.+...+..++|+|||+++.++++||+|||+|.+++||++||||++++ |+ +.|
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~-~~v 80 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGS-AYV 80 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSE-EEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceeccc-ccc
Confidence 3455566677888888888888888876555545999999999999999999999999999999999999999 65 599
Q ss_pred eeccCCCCCCceecCC----CCCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhcccCCCCChhHHHHHHHHHHHHHH
Q 047874 184 DESSMTGESDRVEVDE----KNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSWIGKI 259 (941)
Q Consensus 184 des~LTGEs~pv~k~~----~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 259 (941)
|||.+|||+.|+.|.+ .++++|+||.+.+|++.++|++||.+|..|++.+.....+.+++++++.++++..++.++
T Consensus 81 d~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (230)
T PF00122_consen 81 DESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIII 160 (230)
T ss_dssp ECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhc
Confidence 9999999999999982 357899999999999999999999999999999999887778899999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHhh
Q 047874 260 GLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMK 339 (941)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~L~~~~~~~~~~~~~~l~~ 339 (941)
.++++++++++++.. ... .++...+..++++++.++|++||+++++++..+++++.+
T Consensus 161 ~~~~~~~~~~~~~~~---~~~--------------------~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~ 217 (230)
T PF00122_consen 161 ILAIAILVFIIWFFN---DSG--------------------ISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAK 217 (230)
T ss_dssp HHHHHHHHHHHCHTG---STT--------------------CHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHH
T ss_pred ccccchhhhccceec---ccc--------------------cccccccccccceeeeecccceeehHHHHHHHHHHHHHH
Confidence 877777666443221 100 045577888999999999999999999999999999999
Q ss_pred hhhhccCchhhhh
Q 047874 340 DHAMVRKLSACET 352 (941)
Q Consensus 340 ~~ilvk~~~~~e~ 352 (941)
+|+++|+.+++|+
T Consensus 218 ~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 218 NGIIVKNLSALEA 230 (230)
T ss_dssp TTEEESSTTHHHH
T ss_pred CCEEEeCcccccC
Confidence 9999999999985
No 35
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.96 E-value=7e-27 Score=253.47 Aligned_cols=450 Identities=13% Similarity=0.128 Sum_probs=291.7
Q ss_pred CcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeecccccccc---------------ch----
Q 047874 485 GAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQ---------------VQ---- 545 (941)
Q Consensus 485 Ga~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~---------------~~---- 545 (941)
|-.+.+.+.|+++|+ +..+.|++...+.+..+.+..-...| .|++||||+....-.. ..
T Consensus 698 g~ad~~~eACTdfWd-Gadi~PlSg~dkkkV~DFY~RaclsG-~C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T~ 775 (1354)
T KOG4383|consen 698 GFADFFEEACTDFWD-GADIIPLSGRDKKKVKDFYLRACLSG-HCLAFAYKPCFCALASQLAGKCIELPLNPEHSKIETA 775 (1354)
T ss_pred cHHHHHHHHhhhhcC-CceeeecCcchHHHHHHHHHHHhhcc-cchheecccHHHHHHHHhCCceEEeccCcccchhhhh
Confidence 778888999999997 44677999999999998888877777 6999999864311000 00
Q ss_pred --------------------------------hhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHH
Q 047874 546 --------------------------------EKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHT 593 (941)
Q Consensus 546 --------------------------------~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~ 593 (941)
-...-++.+|.|++..+.+.+.+....|+.|.++.||++.+|-++...
T Consensus 776 celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELk 855 (1354)
T KOG4383|consen 776 CELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELK 855 (1354)
T ss_pred ccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHH
Confidence 001236789999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCC---------Cccc---------------------ceecchh---------------cccCCH-
Q 047874 594 ARAIAIECGILNPDVDL---------NKDE---------------------AVIEGVQ---------------FRSLSA- 627 (941)
Q Consensus 594 a~~ia~~~gi~~~~~~~---------~~~~---------------------~~~~g~~---------------~~~~~~- 627 (941)
.+-+|+++||...|+.. +... ...+..+ +..++.
T Consensus 856 SkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsd 935 (1354)
T KOG4383|consen 856 SKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSD 935 (1354)
T ss_pred HHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccc
Confidence 99999999999877632 0000 0000000 001100
Q ss_pred ------------------------HHHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccC--HHHHHhCCcc
Q 047874 628 ------------------------EERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTND--APALRAADIG 681 (941)
Q Consensus 628 ------------------------~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND--~~~l~~A~vg 681 (941)
+++++...-+.+|..++|+.-.++++.+|++|++|+++|...|- .-.+-+||++
T Consensus 936 i~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadIS 1015 (1354)
T KOG4383|consen 936 IAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADIS 1015 (1354)
T ss_pred hhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEcccee
Confidence 11222222344899999999999999999999999999999984 4457889999
Q ss_pred EEecCC------------CcH------------------HHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 682 LSMGIQ------------GTE------------------VAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLT 731 (941)
Q Consensus 682 Iam~~~------------~~~------------------~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~ 731 (941)
||+..- ++. ...-++|+.......-.+..+|+.+|.....+|+++.|.++
T Consensus 1016 ialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq 1095 (1354)
T KOG4383|consen 1016 IALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQ 1095 (1354)
T ss_pred EEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 998511 010 11123344444444557888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhHHHHHH-hcccCCCCCccCCC--------CCCCCCCCccHHHHHHH
Q 047874 732 VNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALA-LATEQPTNDLMSKP--------PVGRSKPLITKIMWRNL 802 (941)
Q Consensus 732 ~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~-l~~~~~~~~~~~~~--------p~~~~~~~~~~~~~~~~ 802 (941)
..+....+++++.++..|..++..+++|.+++..++..+. +...+|.+.+|.+. |.+.+..++...+|...
T Consensus 1096 ~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~PlL~i~tL~gk~~hkSii~maagKNlqeIPKk~kh~fllcFilkFs 1175 (1354)
T KOG4383|consen 1096 AQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIPLLFIGTLFGKFEHKSIIIMAAGKNLQEIPKKEKHKFLLCFILKFS 1175 (1354)
T ss_pred HHHHHHHHHHHHHHHhccchhccchHHHHHHHHHHHHHHHHHhcCCCccceEEeeccCChhhcccHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999876555555 32344444454432 22222222233333333
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCc----------------------------cccchhHHHHHHHHHHHHHHhhhccCC
Q 047874 803 ISQAIYQVAILLTLQFKGRSILGVK----------------------------ESVKDTMIFNTFVLCQIFNEFNARKLE 854 (941)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~t~~f~~lv~~~~~~~~~~r~~~ 854 (941)
...+...+.+.+.++-......+.+ .++..+.+- ++.-.++..+.... .
T Consensus 1176 ls~ssclIcFgf~L~afcd~~~d~n~~nC~~~m~~S~ddqa~a~FedfangL~saQkl~aa~--iilH~ifiqIThih-~ 1252 (1354)
T KOG4383|consen 1176 LSASSCLICFGFLLMAFCDLMCDFNDINCLFNMDGSADDQALAEFEDFANGLGSAQKLLAAE--IILHIIFIQITHIH-C 1252 (1354)
T ss_pred hhHHHHHHHHHHHHHHhhhhhccccccceeeccCCCcCcccchhHHHHHhhhhhHHHHHHHH--HHHHhheeEEEEEE-E
Confidence 2222222222233332221111110 111111111 11111111111111 1
Q ss_pred cccc-cccCcccHHHHHHHHHHHHHHHHHH----HHh-----hhcccccCCChHHHHHHHHHHHHHHHHHHHHHhccccC
Q 047874 855 KKNI-FKGIHKNKLFLAIIGITIALQLVMV----EFL-----KTFADTERLNWGQWAACIGIAAMSWPIGFLIKCIPVSG 924 (941)
Q Consensus 855 ~~~~-~~~~~~n~~~~~~~~~~~~~~~~~~----~~~-----~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 924 (941)
..+. |+...+|.||-+.+-+.+.-+++.+ +.. +--|+....|+..|++..++..++++.+|++|....|.
T Consensus 1253 tkpl~~ks~LsnLWwa~~i~~lLl~a~V~taldlQi~thrd~~VHfgldd~pLL~~~igcisi~iiVitNEiiKiheIR~ 1332 (1354)
T KOG4383|consen 1253 TKPLSFKSGLSNLWWAFPIKCLLLDAAVITALDLQIGTHRDRGVHFGLDDFPLLPLGIGCISICIIVITNEIIKIHEIRQ 1332 (1354)
T ss_pred ecchhhhcccchheeecccceeehhhHHHHHHhhhhhhccccceeeccccchhHHHHHHHHheeeeeehhhHHHHHHHHH
Confidence 2344 4577788776554433322222222 222 12266677788889988888888889999999988877
Q ss_pred cccccchHHhhhhhc
Q 047874 925 KQLLPINQEASRIHK 939 (941)
Q Consensus 925 ~~~~~~~~~~~~~~~ 939 (941)
....|++|+.+...|
T Consensus 1333 ~~R~QkRqK~eFdTK 1347 (1354)
T KOG4383|consen 1333 FTREQKRQKFEFDTK 1347 (1354)
T ss_pred HHHHHHhhhheeccc
Confidence 778899998887654
No 36
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=99.89 E-value=1.3e-22 Score=204.85 Aligned_cols=171 Identities=39% Similarity=0.637 Sum_probs=143.6
Q ss_pred CCchhHHHHHHHHhhhhHHHHHHhcccCCCCCccCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcc
Q 047874 749 KVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGVKE 828 (941)
Q Consensus 749 ~~~l~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 828 (941)
|.|+++.|+||+|+++|.+|+++++.|+|++++|++||++++++++++.++..++.++++++++++..++.....++.+.
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~~~~~ 80 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIFGWDE 80 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHSTCSSS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 68999999999999999999999999999999999999999999999999999999999999988888877666566554
Q ss_pred c-------cchhHHHHHHHHHHHHHHhhhccCCcccccc--cCcccHHHHHHHHHHHHHHHHHHHH--hhhcccccCCCh
Q 047874 829 S-------VKDTMIFNTFVLCQIFNEFNARKLEKKNIFK--GIHKNKLFLAIIGITIALQLVMVEF--LKTFADTERLNW 897 (941)
Q Consensus 829 ~-------~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~--~~~~n~~~~~~~~~~~~~~~~~~~~--~~~~f~~~~l~~ 897 (941)
. .++|++|.+++++|+++.+++|+.+ .+.|+ +.++|+++++++++++++++++++. ++.+|++.++++
T Consensus 81 ~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~-~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~~~~~f~~~~l~~ 159 (182)
T PF00689_consen 81 ETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRR-RSVFRFRGIFSNKWLLIAILISIALQILIVYVPGLNRIFGTAPLPL 159 (182)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSS-STCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTTHHHHST----TH
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhhccccccc-ccceecccccccchHHHHHHHHHHHHHHHhcchhhHhhhcccCCCH
Confidence 4 4899999999999999999999854 45554 8889999999999999988887654 899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc
Q 047874 898 GQWAACIGIAAMSWPIGFLIKCI 920 (941)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~k~~ 920 (941)
.+|+++++.+++.++++|++|++
T Consensus 160 ~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 160 WQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp HHHHCHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999985
No 37
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.87 E-value=3.3e-22 Score=208.21 Aligned_cols=97 Identities=48% Similarity=0.764 Sum_probs=91.5
Q ss_pred CcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHH
Q 047874 552 GLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERI 631 (941)
Q Consensus 552 ~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 631 (941)
+..++|.+.+.|++|++++++|+.|+++|++++|+|||+..++.++++++||...
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~------------------------- 169 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDS------------------------- 169 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSE-------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccccc-------------------------
Confidence 6789999999999999999999999999999999999999999999999999542
Q ss_pred HhhcCceEEEec--CHHHH--HHHHHHHHhCCCEEEEEcCCccCHHHHHhCC
Q 047874 632 AKIESIRVMARS--SPLDK--LLMVQSLKQKGHVVAVTGDGTNDAPALRAAD 679 (941)
Q Consensus 632 ~~~~~~~v~~~~--~p~~K--~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~ 679 (941)
.+++++ +|++| .++++.++.+++.|+|+|||.||++|+++||
T Consensus 170 ------~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 170 ------IVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp ------EEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred ------cccccccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 389999 99999 9999999977779999999999999999997
No 38
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.56 E-value=2.4e-14 Score=126.15 Aligned_cols=125 Identities=24% Similarity=0.336 Sum_probs=108.7
Q ss_pred EEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHh
Q 047874 554 TLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAK 633 (941)
Q Consensus 554 ~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 633 (941)
...+.++---++=++++++|++|++. +++++.|||...+....|+-.|++..
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 45677777788889999999999999 99999999999999999999998764
Q ss_pred hcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecC--CCcHHHHhccCEEeccCCchHHHHH
Q 047874 634 IESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGI--QGTEVAKESSDIVIMDDNFSSVVTV 711 (941)
Q Consensus 634 ~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~--~~~~~a~~~ad~vl~~~~~~~i~~~ 711 (941)
++++...|+.|.++++.|++.++.|.|+|||.||.+||+.||+||..-+ +..+.+.++||+++. +...++++
T Consensus 72 ----rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik--~i~e~ldl 145 (152)
T COG4087 72 ----RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLK--EIAEILDL 145 (152)
T ss_pred ----eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhh--hHHHHHHH
Confidence 3899999999999999999999999999999999999999999998542 345567799999987 55555544
Q ss_pred H
Q 047874 712 L 712 (941)
Q Consensus 712 i 712 (941)
.
T Consensus 146 ~ 146 (152)
T COG4087 146 L 146 (152)
T ss_pred h
Confidence 3
No 39
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.44 E-value=2.3e-13 Score=119.04 Aligned_cols=87 Identities=34% Similarity=0.569 Sum_probs=70.0
Q ss_pred ccCccccccCCCCCCccccCCccHHHHHHHHHHhcC--CCCcCcccccceeEEeCCCCCCCcEEEEEEecCCceEEEEec
Q 047874 407 LNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLG--MNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWK 484 (941)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~--~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~K 484 (941)
+||.+.+....+.......|+|+|.||+.++. +.| .+....+..++++.++||+|+||||+++++ +++.+.+++|
T Consensus 2 LCn~a~~~~~~~~~~~~~~G~ptE~ALl~~~~-~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~--~~~~~~~~~K 78 (91)
T PF13246_consen 2 LCNDAEIEYDDESKTEEIIGDPTEKALLRFAK-KLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR--NDGKYILYVK 78 (91)
T ss_pred CccccEeecCCCCccccccCCcCHHHHHHHHH-HcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe--CCCEEEEEcC
Confidence 67776665433333334899999999999999 774 455667788999999999999999999998 3335778999
Q ss_pred CcHHHHHhhccc
Q 047874 485 GAAEMILVMCSH 496 (941)
Q Consensus 485 Ga~e~i~~~c~~ 496 (941)
||||.|+++|++
T Consensus 79 GA~e~il~~Ct~ 90 (91)
T PF13246_consen 79 GAPEVILDRCTH 90 (91)
T ss_pred CChHHHHHhcCC
Confidence 999999999985
No 40
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=99.35 E-value=1.7e-12 Score=107.49 Aligned_cols=68 Identities=28% Similarity=0.481 Sum_probs=64.0
Q ss_pred hhCCHHHHHHHhCCCCCCCCCccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHH
Q 047874 16 NLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVCALLS 85 (941)
Q Consensus 16 ~~~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f~~~~~~~lli~~~ls 85 (941)
+..++|++++.|++|..+|||++| |++|+++||+|++++++.+++|+.++++|++|+++++++++++|
T Consensus 2 ~~~~~~~v~~~l~t~~~~GLs~~e--v~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 2 HQLSVEEVLKRLNTSSSQGLSSEE--VEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp TTSSHHHHHHHHTTBTSSBBTHHH--HHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHCcCCCCCCCHHH--HHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 357899999999999999999977 99999999999999988999999999999999999999999886
No 41
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.33 E-value=7.7e-12 Score=134.99 Aligned_cols=68 Identities=25% Similarity=0.305 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHH
Q 047874 646 LDKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 646 ~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 714 (941)
.+|+..++.+.+. .+.|+++|||.||.+||+.|++|+||+ |+.+.+|+.||+++.+++.+++.++|++
T Consensus 195 vsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~~dGva~~i~~ 266 (270)
T PRK10513 195 VNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNLEDGVAFAIEK 266 (270)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCCcchHHHHHHH
Confidence 3677777777664 357999999999999999999999999 9999999999999999999999998864
No 42
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.27 E-value=1.9e-11 Score=131.99 Aligned_cols=150 Identities=15% Similarity=0.119 Sum_probs=104.2
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCC------------------------------Cc
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDL------------------------------NK 612 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~------------------------------~~ 612 (941)
..+.+.++++|++++++|++++++|||+...+..+.+++|+..+-... ..
T Consensus 18 ~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~ 97 (272)
T PRK15126 18 HHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWD 97 (272)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhh
Confidence 358899999999999999999999999999999999999986421100 00
Q ss_pred c--cc-eecch---------h----------------cccC------------CHHH---HHHhh----c-CceE-----
Q 047874 613 D--EA-VIEGV---------Q----------------FRSL------------SAEE---RIAKI----E-SIRV----- 639 (941)
Q Consensus 613 ~--~~-~~~g~---------~----------------~~~~------------~~~~---~~~~~----~-~~~v----- 639 (941)
. .. +..+. . +..+ ..++ +...+ . ...+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ 177 (272)
T PRK15126 98 TRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSAT 177 (272)
T ss_pred cCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCC
Confidence 0 00 00000 0 0000 0011 11111 1 1111
Q ss_pred -EEecCH--HHHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCE--EeccCCchHHHH
Q 047874 640 -MARSSP--LDKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDI--VIMDDNFSSVVT 710 (941)
Q Consensus 640 -~~~~~p--~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~--vl~~~~~~~i~~ 710 (941)
+...+| .+|+..++.+.+. .+.|+++|||.||.+||+.|+.||||+ |+.+.+|+.||+ ++.+++.+++.+
T Consensus 178 ~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~v~~~n~edGva~ 256 (272)
T PRK15126 178 DCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELPHLPVIGHCRNQAVSH 256 (272)
T ss_pred cEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCCCCeecCCCcchHHHH
Confidence 112223 2688888888765 358999999999999999999999999 999999999996 778999999998
Q ss_pred HHH
Q 047874 711 VLR 713 (941)
Q Consensus 711 ~i~ 713 (941)
+|+
T Consensus 257 ~l~ 259 (272)
T PRK15126 257 YLT 259 (272)
T ss_pred HHH
Confidence 885
No 43
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.26 E-value=2e-11 Score=131.24 Aligned_cols=156 Identities=25% Similarity=0.298 Sum_probs=109.5
Q ss_pred EEeccCC-CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCC--------------------------
Q 047874 558 LVGLKDP-CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDL-------------------------- 610 (941)
Q Consensus 558 ~i~~~d~-~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~-------------------------- 610 (941)
.+.-.+. +.+.++++|+++++.|++++++|||+...+..+.+++++..+-...
T Consensus 13 TLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~ 92 (264)
T COG0561 13 TLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELL 92 (264)
T ss_pred CccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHH
Confidence 3333343 8899999999999999999999999999999999999998521100
Q ss_pred ------Ccccceecch---------------------------hcc----------cCCH---HHHHHhh----c-CceE
Q 047874 611 ------NKDEAVIEGV---------------------------QFR----------SLSA---EERIAKI----E-SIRV 639 (941)
Q Consensus 611 ------~~~~~~~~g~---------------------------~~~----------~~~~---~~~~~~~----~-~~~v 639 (941)
.......... ... .... ++....+ . ....
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 172 (264)
T COG0561 93 ELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLT 172 (264)
T ss_pred HHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceE
Confidence 0000000000 000 0001 1111111 1 1122
Q ss_pred EEecC-------H--HHHHHHHHHHHhC-C---CEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCch
Q 047874 640 MARSS-------P--LDKLLMVQSLKQK-G---HVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFS 706 (941)
Q Consensus 640 ~~~~~-------p--~~K~~iv~~l~~~-g---~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~ 706 (941)
+.+.. | .+|+..++.+.+. | +.|+++||+.||.+||+.|+.||||+ |+.+.+|+.||+++.+++.+
T Consensus 173 ~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~~ 251 (264)
T COG0561 173 VSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDED 251 (264)
T ss_pred EEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccch
Confidence 22222 2 4799988888774 3 35999999999999999999999999 99999999999999999999
Q ss_pred HHHHHHHH
Q 047874 707 SVVTVLRW 714 (941)
Q Consensus 707 ~i~~~i~~ 714 (941)
+|.++|++
T Consensus 252 Gv~~~l~~ 259 (264)
T COG0561 252 GVAEALEK 259 (264)
T ss_pred HHHHHHHH
Confidence 99999875
No 44
>PRK10976 putative hydrolase; Provisional
Probab=99.26 E-value=4.1e-11 Score=128.97 Aligned_cols=67 Identities=28% Similarity=0.246 Sum_probs=59.3
Q ss_pred HHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccC--EEeccCCchHHHHHHHH
Q 047874 647 DKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSD--IVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 647 ~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad--~vl~~~~~~~i~~~i~~ 714 (941)
+|...++.+.+. .+.|+++|||.||.+||+.|+.||||+ |+.+.+|+.|| +++.+++.+++.++|++
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~edGVa~~l~~ 262 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNADDAVPHYLRK 262 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCchHHHHHHHHH
Confidence 577777777654 357999999999999999999999999 99999999988 78889999999998863
No 45
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.25 E-value=3.8e-11 Score=126.32 Aligned_cols=148 Identities=22% Similarity=0.256 Sum_probs=104.8
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceec---c-----hhc--------------
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIE---G-----VQF-------------- 622 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~---g-----~~~-------------- 622 (941)
+.+.+.++|++++++|++++++|||+...+..+++.+|+..+-... +...+.. + ..+
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~-nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAE-NGGVISVGFDGKRIFLGDIEECEKAYSELKKRF 99 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEe-cCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhc
Confidence 7889999999999999999999999999999999999986421100 0000000 0 000
Q ss_pred ----------------------ccCCHHHHHHhhcC----ceE-----EEecCHH--HHHHHHHHHHhC----CCEEEEE
Q 047874 623 ----------------------RSLSAEERIAKIES----IRV-----MARSSPL--DKLLMVQSLKQK----GHVVAVT 665 (941)
Q Consensus 623 ----------------------~~~~~~~~~~~~~~----~~v-----~~~~~p~--~K~~iv~~l~~~----g~~v~~i 665 (941)
.....++..+.+.+ ..+ +....|. +|...++.+.+. .+.++++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~ 179 (230)
T PRK01158 100 PEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAI 179 (230)
T ss_pred cccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEE
Confidence 00001111111111 111 1222332 488888887664 3579999
Q ss_pred cCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHH
Q 047874 666 GDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 666 GDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 714 (941)
||+.||.+|++.|++|+||+ |+.+.+|+.||+++.+++.+++.++|++
T Consensus 180 GD~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~~ 227 (230)
T PRK01158 180 GDSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIEH 227 (230)
T ss_pred CCchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHHH
Confidence 99999999999999999999 9999999999999999999999998863
No 46
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.22 E-value=5.2e-11 Score=123.72 Aligned_cols=147 Identities=25% Similarity=0.296 Sum_probs=103.3
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecc-h----------hcc---------
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEG-V----------QFR--------- 623 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g-~----------~~~--------- 623 (941)
++.+.+.++|++|+++|++++++|||+...+..+++.+++..+-... +...+... . .+.
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~-NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAE-NGGVIFYNKEDIFLANMEEEWFLDEEKKKRFP 96 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEc-cCcEEEeCCCcEEEecccchhhHHHhhhhhhh
Confidence 48899999999999999999999999999999999999987431110 00000000 0 000
Q ss_pred ------------------cCCHHHHHHhhcC--ceE-----EEec--CHHHHHHHHHHHHhC----CCEEEEEcCCccCH
Q 047874 624 ------------------SLSAEERIAKIES--IRV-----MARS--SPLDKLLMVQSLKQK----GHVVAVTGDGTNDA 672 (941)
Q Consensus 624 ------------------~~~~~~~~~~~~~--~~v-----~~~~--~p~~K~~iv~~l~~~----g~~v~~iGDg~ND~ 672 (941)
....+.+...+.. ..+ +... ...+|...++.+.+. .+.++++||+.||.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~ 176 (215)
T TIGR01487 97 RDRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDI 176 (215)
T ss_pred hhhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence 0000111111111 111 1122 235788888888764 34699999999999
Q ss_pred HHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHH
Q 047874 673 PALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVL 712 (941)
Q Consensus 673 ~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i 712 (941)
+|++.|++|+||+ |+.+.+|+.||+++.+++.+++.++|
T Consensus 177 ~ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 177 DLFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEVL 215 (215)
T ss_pred HHHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhhC
Confidence 9999999999999 99999999999999999999988653
No 47
>PLN02887 hydrolase family protein
Probab=99.19 E-value=8.5e-11 Score=136.53 Aligned_cols=67 Identities=24% Similarity=0.359 Sum_probs=59.3
Q ss_pred HHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHH
Q 047874 647 DKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 647 ~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 714 (941)
+|+..++.+.+. .+.|+++|||.||.+||+.|+.||||| ||.+.+|+.||+|+.+++.++|.++|++
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLek 577 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIYR 577 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHHH
Confidence 566666666654 247999999999999999999999999 9999999999999999999999998863
No 48
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.15 E-value=2e-10 Score=120.36 Aligned_cols=148 Identities=21% Similarity=0.272 Sum_probs=102.6
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecch--------hcc------------
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGV--------QFR------------ 623 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~--------~~~------------ 623 (941)
.+.+.+.++|++++++|++++++|||+...+..+++++|+..+.... +...+.... .+.
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~-nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAE-NGGEISYNEGMDDIFLAYLEEEWFLDIVIAKT 93 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEe-cCcEEEeCCCCceEEecccCHHHHHHHHHhcc
Confidence 47788999999999999999999999999999999999965321100 000000000 000
Q ss_pred ---------------------cCCHHHHHHhhcC----ceE-----EEecCH--HHHHHHHHHHHhC----CCEEEEEcC
Q 047874 624 ---------------------SLSAEERIAKIES----IRV-----MARSSP--LDKLLMVQSLKQK----GHVVAVTGD 667 (941)
Q Consensus 624 ---------------------~~~~~~~~~~~~~----~~v-----~~~~~p--~~K~~iv~~l~~~----g~~v~~iGD 667 (941)
....+........ ..+ +....| .+|...++.+.++ .+.|+++||
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD 173 (225)
T TIGR01482 94 FPFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGD 173 (225)
T ss_pred cchhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECC
Confidence 0001111111111 001 112222 4788888887664 357999999
Q ss_pred CccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchH----HHHHHH
Q 047874 668 GTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSS----VVTVLR 713 (941)
Q Consensus 668 g~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~----i~~~i~ 713 (941)
+.||.+|++.|++|+||+ |+.+.+|+.||+++.+++.++ +.++|+
T Consensus 174 ~~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 174 SENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred CHhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 999999999999999999 999999999999999999999 766664
No 49
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.14 E-value=3.7e-10 Score=120.45 Aligned_cols=150 Identities=18% Similarity=0.192 Sum_probs=104.3
Q ss_pred cCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCC------------------------------
Q 047874 562 KDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLN------------------------------ 611 (941)
Q Consensus 562 ~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~------------------------------ 611 (941)
...+.+.+.++|++++++|++++++|||+...+..+.+++++..+-....
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhh
Confidence 34577999999999999999999999999999999999999873211000
Q ss_pred --cccc-eecchhcc-c--------------------------------------CCH-------HHHHHhhcCceEEE-
Q 047874 612 --KDEA-VIEGVQFR-S--------------------------------------LSA-------EERIAKIESIRVMA- 641 (941)
Q Consensus 612 --~~~~-~~~g~~~~-~--------------------------------------~~~-------~~~~~~~~~~~v~~- 641 (941)
.... +.++.... . ... +++.+.......+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence 0000 00000000 0 000 11122222211111
Q ss_pred ------ec--CHHHHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHH
Q 047874 642 ------RS--SPLDKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVV 709 (941)
Q Consensus 642 ------~~--~p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~ 709 (941)
.. ...+|...++.+.+. .+.++++||+.||.+||+.||.|+||+ |+.+..++.||+++.+++.++++
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~gv~ 251 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDDGVA 251 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCTHHH
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCChHH
Confidence 12 235799888888763 468999999999999999999999999 99999999999999988889998
Q ss_pred HHH
Q 047874 710 TVL 712 (941)
Q Consensus 710 ~~i 712 (941)
++|
T Consensus 252 ~~i 254 (254)
T PF08282_consen 252 KAI 254 (254)
T ss_dssp HHH
T ss_pred HhC
Confidence 875
No 50
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=99.13 E-value=9.9e-11 Score=95.50 Aligned_cols=62 Identities=26% Similarity=0.427 Sum_probs=57.0
Q ss_pred HhCCCCCCCCCccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHhhhc
Q 047874 26 ILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVCALLSLGFG 89 (941)
Q Consensus 26 ~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f~~~~~~~lli~~~ls~~~~ 89 (941)
.|++|.++|||+++ +++|+++||+|++++++.+++|+.++++|++|++++++++++++++.+
T Consensus 2 ~l~~~~~~GLs~~~--v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSEE--AARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHHH--HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 47888888999877 999999999999999888899999999999999999999999998653
No 51
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.12 E-value=3.2e-10 Score=122.56 Aligned_cols=67 Identities=27% Similarity=0.352 Sum_probs=58.6
Q ss_pred HHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHH
Q 047874 647 DKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 647 ~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 714 (941)
+|...++.+.++ .+.|+++||+.||.+|++.|++|+||| |+.+..|+.||+++.+++.+++.++|++
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~~ 269 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIYS 269 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHHH
Confidence 577777766544 357999999999999999999999999 8999999999999999999999998863
No 52
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.07 E-value=6.2e-10 Score=121.05 Aligned_cols=131 Identities=20% Similarity=0.276 Sum_probs=100.4
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCC-CCCcccceecchhcccCCHHHHHHhhcCceEEEe
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDV-DLNKDEAVIEGVQFRSLSAEERIAKIESIRVMAR 642 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 642 (941)
++.|++.+.++.|+++|+++.++||.....+..+.+++|+..... .+......++|.... .-
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g-----------------~i 243 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLG-----------------DI 243 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecC-----------------cc
Confidence 478999999999999999999999999888899999999864100 000000111111100 01
Q ss_pred cCHHHHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHH
Q 047874 643 SSPLDKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLR 713 (941)
Q Consensus 643 ~~p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 713 (941)
+....|.+.++.+.++ .+.|+++|||.||.+|++.||+|||| |+.+..++.||+++..++++++..++-
T Consensus 244 v~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 244 VDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred CCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 2346788888888654 36899999999999999999999999 789999999999999999999987664
No 53
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.06 E-value=8.9e-10 Score=112.21 Aligned_cols=129 Identities=16% Similarity=0.098 Sum_probs=100.9
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCC-CCCccc-ceecchhcccCCHHHHHHhhcCceEEE
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDV-DLNKDE-AVIEGVQFRSLSAEERIAKIESIRVMA 641 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~-~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~v~~ 641 (941)
++.|++.+.|+.+++.| +++++||-....+..+++++|+..--. .+.... ..++|.. +
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~tG~~-----------------~-- 127 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQ-----------------L-- 127 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeECee-----------------e--
Confidence 57899999999999985 999999999999999999999974210 000000 1111210 1
Q ss_pred ecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHH
Q 047874 642 RSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWG 715 (941)
Q Consensus 642 ~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~g 715 (941)
..++.|...++.+++.+..+.++|||.||.+|++.||+||++. +.+..++.||-.-.-.+.+.+..++.++
T Consensus 128 -~~~~~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 128 -RQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred -cCcchHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 3567899999999988889999999999999999999999995 7777777777666666788888888765
No 54
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.03 E-value=2.9e-09 Score=114.64 Aligned_cols=68 Identities=19% Similarity=0.074 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHh-------CCCEEEEEcCCccCHHHHHhCCccEEecCCCc-HH-----HHhccCEEeccCCchHHHHHH
Q 047874 646 LDKLLMVQSLKQ-------KGHVVAVTGDGTNDAPALRAADIGLSMGIQGT-EV-----AKESSDIVIMDDNFSSVVTVL 712 (941)
Q Consensus 646 ~~K~~iv~~l~~-------~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~-~~-----a~~~ad~vl~~~~~~~i~~~i 712 (941)
.+|...++.+.+ ..+.|+++|||.||.+||+.|++||||| ++. +. .+..+|+++...+-+++.+++
T Consensus 186 ~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~-~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l 264 (271)
T PRK03669 186 AGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVK-GLNREGVHLQDDDPARVYRTQREGPEGWREGL 264 (271)
T ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEec-CCCCCCcccccccCCceEeccCCCcHHHHHHH
Confidence 367777777765 3468999999999999999999999999 444 32 345799999999999999888
Q ss_pred HH
Q 047874 713 RW 714 (941)
Q Consensus 713 ~~ 714 (941)
++
T Consensus 265 ~~ 266 (271)
T PRK03669 265 DH 266 (271)
T ss_pred HH
Confidence 64
No 55
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.01 E-value=3.4e-09 Score=113.22 Aligned_cols=67 Identities=22% Similarity=0.167 Sum_probs=56.0
Q ss_pred HHHHHHHHHHhC------CCEEEEEcCCccCHHHHHhCCccEEecCCCc---HHHHhc--c-CEEeccCCchHHHHHHHH
Q 047874 647 DKLLMVQSLKQK------GHVVAVTGDGTNDAPALRAADIGLSMGIQGT---EVAKES--S-DIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 647 ~K~~iv~~l~~~------g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~---~~a~~~--a-d~vl~~~~~~~i~~~i~~ 714 (941)
+|...++.+.+. .+.|+++||+.||.+|++.||.||||+ |+. +..|+. | ++++.+++.+|+.+++++
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~ 254 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVP-GPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEH 254 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeC-CCCCCccccCccCCCcEEEcCCCCcHHHHHHHHH
Confidence 677776666543 467999999999999999999999999 887 467876 4 599999999999998864
No 56
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.00 E-value=1.7e-09 Score=106.02 Aligned_cols=104 Identities=16% Similarity=0.183 Sum_probs=85.8
Q ss_pred HHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec--CHHHH
Q 047874 571 AAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS--SPLDK 648 (941)
Q Consensus 571 ~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~--~p~~K 648 (941)
.+|+.|+++|+++.++|+.+...+....+.+|+.. .|... .|+..
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~---------------------------------~f~~~kpkp~~~ 87 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR---------------------------------FHEGIKKKTEPY 87 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---------------------------------EEecCCCCHHHH
Confidence 78999999999999999999999999999999974 22222 34444
Q ss_pred HHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHH
Q 047874 649 LLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSV 708 (941)
Q Consensus 649 ~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i 708 (941)
..+++.++-..+.|+++||+.||.+|++.|++++||+ |+.+.+++.|++++.+++-++.
T Consensus 88 ~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~~~~~~g~ 146 (169)
T TIGR02726 88 AQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVG-DAVADVKEAAAYVTTARGGHGA 146 (169)
T ss_pred HHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECc-CchHHHHHhCCEEcCCCCCCCH
Confidence 4555555444568999999999999999999999999 9999999999999976665554
No 57
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.94 E-value=3.2e-09 Score=113.56 Aligned_cols=66 Identities=35% Similarity=0.374 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHH
Q 047874 646 LDKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVL 712 (941)
Q Consensus 646 ~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i 712 (941)
.+|...++.+.+. .+.++++||+.||.+|++.|+.|+||+ ++.+.+++.||+++.+++.+++.++|
T Consensus 187 ~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 187 VSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNEDGVALAL 256 (256)
T ss_pred CChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCCCcchhhhC
Confidence 3688888888765 358999999999999999999999999 89999999999999999999998653
No 58
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.93 E-value=6.1e-09 Score=101.56 Aligned_cols=105 Identities=17% Similarity=0.248 Sum_probs=84.2
Q ss_pred HHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHHH
Q 047874 572 AVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLM 651 (941)
Q Consensus 572 ~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~i 651 (941)
+|++|+++|+++.++||++...+..+++++|+.. .+... ..|.+.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~---------------------------------~~~~~--~~k~~~ 80 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH---------------------------------LYQGQ--SNKLIA 80 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE---------------------------------EEecc--cchHHH
Confidence 8999999999999999999999999999999864 12211 234444
Q ss_pred HHHHHh----CCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchH-HHHHH
Q 047874 652 VQSLKQ----KGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSS-VVTVL 712 (941)
Q Consensus 652 v~~l~~----~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~-i~~~i 712 (941)
++.+.+ ..+.++++||+.||.+|++.|+++++|. ++.+..+..||+++.++.-++ +.+++
T Consensus 81 ~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~~~~g~~~~~~ 145 (154)
T TIGR01670 81 FSDILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVREVC 145 (154)
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCCCCCcHHHHHH
Confidence 444432 3568999999999999999999999998 888999999999998776444 55444
No 59
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.84 E-value=9.6e-09 Score=105.13 Aligned_cols=120 Identities=23% Similarity=0.293 Sum_probs=90.7
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCC-CCcccceecchhcccCCHHHHHHhhcCceEEE
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVD-LNKDEAVIEGVQFRSLSAEERIAKIESIRVMA 641 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~ 641 (941)
.+++|++.+.++.++++|.+++++||-...-+..+|+++|++..-.. +...+-+++|.. +--
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v-----------------~g~ 138 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGRV-----------------VGP 138 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEecee-----------------eee
Confidence 57899999999999999999999999999999999999999863210 000001333332 223
Q ss_pred ecCHHHHHHHHHHHHhC-CC---EEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEec
Q 047874 642 RSSPLDKLLMVQSLKQK-GH---VVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIM 701 (941)
Q Consensus 642 ~~~p~~K~~iv~~l~~~-g~---~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~ 701 (941)
.+..+.|...++.+.+. |. .+.++|||.||.|||+.||.+|+++ +.+..+..|+....
T Consensus 139 ~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~~ 200 (212)
T COG0560 139 ICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVN--PKPKLRALADVRIW 200 (212)
T ss_pred ecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHHhcC
Confidence 44557899888776653 43 6999999999999999999999995 66666666665544
No 60
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.79 E-value=1.8e-08 Score=92.93 Aligned_cols=116 Identities=19% Similarity=0.294 Sum_probs=95.2
Q ss_pred HHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHH
Q 047874 571 AAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLL 650 (941)
Q Consensus 571 ~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 650 (941)
-.|+.|+++||++.++|||+...+..-|+++||.. +|- --.+|..
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~---------------------------------~~q--G~~dK~~ 86 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH---------------------------------LYQ--GISDKLA 86 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce---------------------------------eee--chHhHHH
Confidence 57899999999999999999999999999999974 232 2367877
Q ss_pred HHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCC----chHHHHHHHHHHHHHHHH
Q 047874 651 MVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDN----FSSVVTVLRWGRCVYNNI 722 (941)
Q Consensus 651 iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~----~~~i~~~i~~gR~~~~~i 722 (941)
..+.+.++ -+.|+++||..||.|+|++.++++|+. ++.+..++.||+|+.... ...+.++|..++..++-.
T Consensus 87 a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~~ 165 (170)
T COG1778 87 AFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDEA 165 (170)
T ss_pred HHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHHH
Confidence 77666654 568999999999999999999999998 899999999999997654 445666666666555443
No 61
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.78 E-value=2.4e-08 Score=104.12 Aligned_cols=128 Identities=20% Similarity=0.326 Sum_probs=93.7
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCC-CCcccceecchhcccCCHHHHHHhhcCceEEEe
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVD-LNKDEAVIEGVQFRSLSAEERIAKIESIRVMAR 642 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 642 (941)
++.+++.+.++.|+++|+++.++||.....+..+.+.+|+..-... .......++|. +...
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~------------------~~~~ 146 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTGL------------------VEGP 146 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEEEE------------------ecCc
Confidence 5789999999999999999999999999999999999998641100 00000011110 0001
Q ss_pred -cCHHHHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHH
Q 047874 643 -SSPLDKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTV 711 (941)
Q Consensus 643 -~~p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~ 711 (941)
..+..|..+++.+.++ .+.++++||+.||.+|.+.||++++++ +.+..+++||+++.++++..+..+
T Consensus 147 ~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 147 IVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred ccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 1123366666655443 246899999999999999999999985 678888999999999998887754
No 62
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.75 E-value=5.2e-08 Score=105.06 Aligned_cols=67 Identities=24% Similarity=0.173 Sum_probs=56.6
Q ss_pred HHHHHHHHHHhC----C-CEEEEEcCCccCHHHHHhCCccEEecCCCcHHHH----hcc-CEEe--ccCCchHHHHHHHH
Q 047874 647 DKLLMVQSLKQK----G-HVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAK----ESS-DIVI--MDDNFSSVVTVLRW 714 (941)
Q Consensus 647 ~K~~iv~~l~~~----g-~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~----~~a-d~vl--~~~~~~~i~~~i~~ 714 (941)
+|...++.+.+. . +.|+++||+.||.+|++.|++|+||+ ||.+.+| +.| +.+. .+++-+++.++|++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~-NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~ 268 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVP-GPDGPNPPLLPGIADGEFILASAPGPEGWAEAINK 268 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeC-CCCCCCcccCccccCCceEEecCCCcHHHHHHHHH
Confidence 677777777643 5 89999999999999999999999999 9999988 666 6777 67778999988863
No 63
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.72 E-value=4.9e-08 Score=98.17 Aligned_cols=98 Identities=17% Similarity=0.257 Sum_probs=79.8
Q ss_pred HHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHH
Q 047874 571 AAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLL 650 (941)
Q Consensus 571 ~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 650 (941)
.+|+.|+++|+++.++||++...+..+++++|+.. +|. ..+.|..
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~---------------------------------~f~--g~~~k~~ 99 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH---------------------------------LYQ--GQSNKLI 99 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce---------------------------------eec--CCCcHHH
Confidence 68999999999999999999999999999999864 222 1234555
Q ss_pred HHHHHHh-C---CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCC
Q 047874 651 MVQSLKQ-K---GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDN 704 (941)
Q Consensus 651 iv~~l~~-~---g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~ 704 (941)
.++.+.+ . .+.|+++||+.||.+|++.|+++++++ ++.+..+..||+++..+.
T Consensus 100 ~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~~~ 156 (183)
T PRK09484 100 AFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRIAG 156 (183)
T ss_pred HHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecCCC
Confidence 5544433 2 458999999999999999999999998 788888999999997544
No 64
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.64 E-value=1.5e-07 Score=99.31 Aligned_cols=67 Identities=18% Similarity=0.232 Sum_probs=59.2
Q ss_pred HHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccC----EEeccCCchHHHHHHHH
Q 047874 647 DKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSD----IVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 647 ~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad----~vl~~~~~~~i~~~i~~ 714 (941)
.|...++.+.++ ...|+++||+.||.+|++.|+.||+|+ |+.+..|+.|| +++.+++-+++.++|++
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 788888888664 236899999999999999999999999 99999999999 88888889999998864
No 65
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.53 E-value=5.4e-07 Score=92.87 Aligned_cols=127 Identities=18% Similarity=0.207 Sum_probs=90.6
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEE--
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMA-- 641 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~-- 641 (941)
++.|++.+.++.|+++ +++.++|+.....+..+.+++|+...-. .....++.. .+..
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~----~~~~~~~~~----------------~i~~~~ 126 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFC----HSLEVDEDG----------------MITGYD 126 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhc----ceEEECCCC----------------eEECcc
Confidence 3579999999999999 9999999999999999999999863100 000010000 0000
Q ss_pred ecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCE-EeccCCchHHHHHHHH
Q 047874 642 RSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDI-VIMDDNFSSVVTVLRW 714 (941)
Q Consensus 642 ~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~-vl~~~~~~~i~~~i~~ 714 (941)
...|..|...++.++..+..++|+|||.||.+|.++|++|+..+ ...+.....+++ ++. ++..+...+.+
T Consensus 127 ~~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~~--~~~el~~~l~~ 197 (205)
T PRK13582 127 LRQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAVH--TYDELLAAIDK 197 (205)
T ss_pred ccccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCcccccC--CHHHHHHHHHH
Confidence 12467888888988888899999999999999999999999987 443334445565 433 56666655543
No 66
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.52 E-value=6.1e-07 Score=95.41 Aligned_cols=152 Identities=16% Similarity=0.196 Sum_probs=102.2
Q ss_pred cCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCC-CCcccceecch-hc-----------------
Q 047874 562 KDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVD-LNKDEAVIEGV-QF----------------- 622 (941)
Q Consensus 562 ~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~-~~~~~~~~~g~-~~----------------- 622 (941)
..+..|...+++++++++|+.++++|||+...++.+.+++++..+... ..+...+..+. ..
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 345678999999999999999999999999999999999998765210 01111111100 00
Q ss_pred --------cc-----------------CCH-------HHHHHhhc----CceE-EE-----ecCH--HHHHHHHHHHHhC
Q 047874 623 --------RS-----------------LSA-------EERIAKIE----SIRV-MA-----RSSP--LDKLLMVQSLKQK 658 (941)
Q Consensus 623 --------~~-----------------~~~-------~~~~~~~~----~~~v-~~-----~~~p--~~K~~iv~~l~~~ 658 (941)
.. ... +++...+. .+.+ .+ ...| ..|...++.+.+.
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 00 000 00111111 1111 11 2233 4788888888764
Q ss_pred ----CCEEEEEcCCccCHHHHHh-CCccEEecCCCcHHHHhccC-------EEeccCCchHHHHHHHH
Q 047874 659 ----GHVVAVTGDGTNDAPALRA-ADIGLSMGIQGTEVAKESSD-------IVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 659 ----g~~v~~iGDg~ND~~~l~~-A~vgIam~~~~~~~a~~~ad-------~vl~~~~~~~i~~~i~~ 714 (941)
.+.|+++||+.||.+|++. ++.||+|+ |+.+..++.++ ++.....-+|+.+++++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~ 245 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAIAH 245 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHHH
Confidence 4689999999999999998 67999999 99998887554 77777778899888764
No 67
>PRK08238 hypothetical protein; Validated
Probab=98.51 E-value=4.6e-05 Score=87.63 Aligned_cols=98 Identities=18% Similarity=0.233 Sum_probs=73.4
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++++++.+.+++++++|++++++|+.+...+..+++.+|+.+ .++.++. ..++
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd---------~Vigsd~------------------~~~~ 124 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD---------GVFASDG------------------TTNL 124 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC---------EEEeCCC------------------cccc
Confidence 467999999999999999999999999999999999999832 1221111 1134
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTE 690 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~ 690 (941)
.|+.|.+.++..... +.+.++||+.||.+|++.|+-.++++ .+..
T Consensus 125 kg~~K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn-~~~~ 169 (479)
T PRK08238 125 KGAAKAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVG-ASPG 169 (479)
T ss_pred CCchHHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEEC-CCHH
Confidence 566676655432222 22678999999999999999999997 4433
No 68
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.51 E-value=1.5e-07 Score=89.89 Aligned_cols=111 Identities=21% Similarity=0.287 Sum_probs=80.0
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
.+.|++++.++.|++.|.++.++||.-..-+..+|.++||+..+.+.+.-..--+|+-.. .. . --.-+
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~g-fd---------~--~~pts 155 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLG-FD---------T--NEPTS 155 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccc-cc---------c--CCccc
Confidence 367999999999999999999999999999999999999987543211000000111000 00 0 00112
Q ss_pred CHHHHHHHHHHHHhC--CCEEEEEcCCccCHHHHHhCCccEEecC
Q 047874 644 SPLDKLLMVQSLKQK--GHVVAVTGDGTNDAPALRAADIGLSMGI 686 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~--g~~v~~iGDg~ND~~~l~~A~vgIam~~ 686 (941)
....|.++++.+++. -+.++|||||+||.+|+..||.=|+.++
T Consensus 156 dsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~g 200 (227)
T KOG1615|consen 156 DSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFGG 200 (227)
T ss_pred cCCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccCC
Confidence 335799999999885 4589999999999999999888887764
No 69
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.41 E-value=1.2e-06 Score=89.91 Aligned_cols=117 Identities=20% Similarity=0.165 Sum_probs=80.8
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++++++.+.++.|+++|+++.++|+.....+..+++.+|+.... ...+...+-.... ...+...
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~------~~~~~~~~~g~~~----------p~~~~~~ 143 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVY------SNELVFDEKGFIQ----------PDGIVRV 143 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEE------EEEEEEcCCCeEe----------cceeeEE
Confidence 57899999999999999999999999999999999999975310 0001000000000 0011223
Q ss_pred CHHHHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccC
Q 047874 644 SPLDKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSD 697 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad 697 (941)
.|..|.++++.+.+. .+.++++||+.||.+|++.||++++++ ......+.++|
T Consensus 144 ~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~ 200 (201)
T TIGR01491 144 TFDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKD 200 (201)
T ss_pred ccccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence 455677776666543 346999999999999999999999997 44444444444
No 70
>PLN02382 probable sucrose-phosphatase
Probab=98.37 E-value=2.7e-06 Score=96.38 Aligned_cols=149 Identities=17% Similarity=0.203 Sum_probs=95.2
Q ss_pred CCcchHHHH-HHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCC-Ccccceecchh---------------------
Q 047874 565 CRPGVRAAV-ESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDL-NKDEAVIEGVQ--------------------- 621 (941)
Q Consensus 565 ~~~~~~~~I-~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~-~~~~~~~~g~~--------------------- 621 (941)
+.+...+++ +++++.|+.++++|||.+.....+.++.++..+.... .+...+..+..
T Consensus 29 ~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~ 108 (413)
T PLN02382 29 LSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVV 108 (413)
T ss_pred hhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHH
Confidence 333344555 8899999999999999999999999999988764200 00000000000
Q ss_pred -----ccc-----------------CCH-------HHHHHhhc----CceE------EEecCH--HHHHHHHHHHHhC--
Q 047874 622 -----FRS-----------------LSA-------EERIAKIE----SIRV------MARSSP--LDKLLMVQSLKQK-- 658 (941)
Q Consensus 622 -----~~~-----------------~~~-------~~~~~~~~----~~~v------~~~~~p--~~K~~iv~~l~~~-- 658 (941)
+.. ... +++.+.+. .+.+ +....| .+|...++.+.+.
T Consensus 109 ~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~ 188 (413)
T PLN02382 109 EETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLK 188 (413)
T ss_pred HHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhh
Confidence 000 000 11111121 1111 223333 3698888888765
Q ss_pred -----CCEEEEEcCCccCHHHHHhCC-ccEEecCCCcHHHHhcc--------CEEec-cCCchHHHHHHHH
Q 047874 659 -----GHVVAVTGDGTNDAPALRAAD-IGLSMGIQGTEVAKESS--------DIVIM-DDNFSSVVTVLRW 714 (941)
Q Consensus 659 -----g~~v~~iGDg~ND~~~l~~A~-vgIam~~~~~~~a~~~a--------d~vl~-~~~~~~i~~~i~~ 714 (941)
.+.|+++||+.||.+||+.|+ .||+|+ |+.+..|+.+ +++.. ++.-+|+.++|++
T Consensus 189 ~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~ 258 (413)
T PLN02382 189 AEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGH 258 (413)
T ss_pred hcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHH
Confidence 348999999999999999999 699999 9999888743 44433 5567888877753
No 71
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=98.30 E-value=5.1e-06 Score=86.66 Aligned_cols=39 Identities=13% Similarity=0.164 Sum_probs=36.3
Q ss_pred CcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCC
Q 047874 566 RPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGIL 604 (941)
Q Consensus 566 ~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~ 604 (941)
.+.++++|++|+++|++++++|||+...+..+.+.+|+.
T Consensus 18 ~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 18 WQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 344899999999999999999999999999999999986
No 72
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.24 E-value=7e-06 Score=85.06 Aligned_cols=136 Identities=15% Similarity=0.093 Sum_probs=87.2
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEE--
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVM-- 640 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~-- 640 (941)
.+++|++.+.++.|++.|+++.++||.....+..+.+.++.... . .......+|..+.... +....+
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~-i--~~n~~~~~~~~~~~~~--------p~~~~~~~ 137 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDR-I--YCNEADFSNEYIHIDW--------PHPCDGTC 137 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCccc-E--EeceeEeeCCeeEEeC--------CCCCcccc
Confidence 36899999999999999999999999999999999888754321 0 0001122222211000 000000
Q ss_pred -EecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHh--ccCEEeccCCchHHHHHHH
Q 047874 641 -ARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKE--SSDIVIMDDNFSSVVTVLR 713 (941)
Q Consensus 641 -~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~--~ad~vl~~~~~~~i~~~i~ 713 (941)
..+ ...|..+++.++...+.++|+|||.||.+|++.||+++|-+ .-.+..++ .+.+.. ++|..+...++
T Consensus 138 ~~~c-g~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~-~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 138 QNQC-GCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD-YLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred ccCC-CCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH-HHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 011 34689999998888888999999999999999999987754 21121121 122222 46777776654
No 73
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.23 E-value=5.6e-06 Score=86.20 Aligned_cols=44 Identities=16% Similarity=0.143 Sum_probs=39.7
Q ss_pred cCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 047874 562 KDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILN 605 (941)
Q Consensus 562 ~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~ 605 (941)
.+..-++++++|++|+++|++++++|||+...+..+.+++|+..
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 45566789999999999999999999999999999999999854
No 74
>PLN02954 phosphoserine phosphatase
Probab=98.19 E-value=1.3e-05 Score=83.91 Aligned_cols=129 Identities=23% Similarity=0.301 Sum_probs=83.3
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCC---C-cccceecchhcccCCHHHHHHhhcCceE
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDL---N-KDEAVIEGVQFRSLSAEERIAKIESIRV 639 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~---~-~~~~~~~g~~~~~~~~~~~~~~~~~~~v 639 (941)
++.|++.+.++.|+++|+++.++||.....+..+++.+|+...+... . .....+.|..... .
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~--------------~ 149 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENE--------------P 149 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCC--------------c
Confidence 36799999999999999999999999999999999999996311100 0 0000011110000 0
Q ss_pred EEecCHHHHHHHHHHHHhC--CCEEEEEcCCccCHHHHHh--CCccEEecCCC-cHHHHhccCEEeccCCchHHHH
Q 047874 640 MARSSPLDKLLMVQSLKQK--GHVVAVTGDGTNDAPALRA--ADIGLSMGIQG-TEVAKESSDIVIMDDNFSSVVT 710 (941)
Q Consensus 640 ~~~~~p~~K~~iv~~l~~~--g~~v~~iGDg~ND~~~l~~--A~vgIam~~~~-~~~a~~~ad~vl~~~~~~~i~~ 710 (941)
.+....|.+.++.+.++ .+.++++||+.||..|.++ ++++++.+... .+.....+|+++. ++..+.+
T Consensus 150 --~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~ 221 (224)
T PLN02954 150 --TSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT--DFQDLIE 221 (224)
T ss_pred --ccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--CHHHHHH
Confidence 01123477777766654 3579999999999999888 45555555221 2334556899886 5555554
No 75
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.12 E-value=4.8e-06 Score=84.69 Aligned_cols=92 Identities=25% Similarity=0.314 Sum_probs=68.9
Q ss_pred cchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHH
Q 047874 567 PGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPL 646 (941)
Q Consensus 567 ~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~ 646 (941)
+++.+.|+.++++|++++++||.....+..+++.+|+...+ ++......+- ......+.++.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~--------v~~~~~~~~~----------~~~~~~~~~~~ 153 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN--------VIGNELFDNG----------GGIFTGRITGS 153 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG--------EEEEEEECTT----------CCEEEEEEEEE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE--------EEEEeeeecc----------cceeeeeECCC
Confidence 77889999999999999999999999999999999997521 1111110000 11233444433
Q ss_pred ---HHHHHHHHH------HhCCCEEEEEcCCccCHHHHH
Q 047874 647 ---DKLLMVQSL------KQKGHVVAVTGDGTNDAPALR 676 (941)
Q Consensus 647 ---~K~~iv~~l------~~~g~~v~~iGDg~ND~~~l~ 676 (941)
.|.+.++.+ +.....++++|||.||.+|||
T Consensus 154 ~~~~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 154 NCGGKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp EESHHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred CCCcHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 499999999 445789999999999999996
No 76
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.05 E-value=1.7e-05 Score=81.41 Aligned_cols=107 Identities=16% Similarity=0.146 Sum_probs=77.3
Q ss_pred cCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCC-CCCc-ccceecchhcccCCHHHHHHhhcCceE
Q 047874 562 KDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDV-DLNK-DEAVIEGVQFRSLSAEERIAKIESIRV 639 (941)
Q Consensus 562 ~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~-~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~v 639 (941)
..++++++.+.++.++++|++++++||.....+..+++.+|+..--. .... .....+|...
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~----------------- 147 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGNID----------------- 147 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCCcc-----------------
Confidence 34578999999999999999999999999999999999999864200 0000 0111222110
Q ss_pred EEecCHHHHHHHHHHHHh-CC---CEEEEEcCCccCHHHHHhCCccEEec
Q 047874 640 MARSSPLDKLLMVQSLKQ-KG---HVVAVTGDGTNDAPALRAADIGLSMG 685 (941)
Q Consensus 640 ~~~~~p~~K~~iv~~l~~-~g---~~v~~iGDg~ND~~~l~~A~vgIam~ 685 (941)
--.+..+.|...++.+.+ .+ +.+.++||+.+|.+|++.||.++++.
T Consensus 148 ~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 148 GNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred CCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 012345778877776654 33 37899999999999999999999986
No 77
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.04 E-value=2e-05 Score=81.98 Aligned_cols=110 Identities=15% Similarity=0.124 Sum_probs=74.5
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceE-E-E
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRV-M-A 641 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v-~-~ 641 (941)
+++|++.+.++.|++.|+++.++||-....+..+.+.+ +..... .......+|..+...... .... + .
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i--~~n~~~~~~~~~~~~kp~-------p~~~~~~~ 143 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQI--YCNGSDFSGEYITITWPH-------PCDEHCQN 143 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcE--EEeEEEecCCeeEEeccC-------Cccccccc
Confidence 57899999999999999999999999999999999988 643110 000111222211100000 0000 0 0
Q ss_pred ecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEe
Q 047874 642 RSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSM 684 (941)
Q Consensus 642 ~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam 684 (941)
++ ...|..+++.++...+.|+++|||.||.+|.+.||+.++-
T Consensus 144 ~~-~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~ 185 (219)
T PRK09552 144 HC-GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFAR 185 (219)
T ss_pred cC-CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeH
Confidence 01 1248888888887778899999999999999999997763
No 78
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.04 E-value=1e-05 Score=81.09 Aligned_cols=98 Identities=22% Similarity=0.287 Sum_probs=70.2
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCC-CCCc-ccceecchhcccCCHHHHHHhhcCceEEEe
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDV-DLNK-DEAVIEGVQFRSLSAEERIAKIESIRVMAR 642 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~-~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 642 (941)
+++++.+.++.+++.|++++++||.....+..+++.+|+..--. .... ....++|.... -..
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~----------------~~~ 137 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEG----------------QVN 137 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeCccCC----------------ccc
Confidence 57999999999999999999999999999999999999863100 0000 00011121100 012
Q ss_pred cCHHHHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhC
Q 047874 643 SSPLDKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAA 678 (941)
Q Consensus 643 ~~p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A 678 (941)
..+..|...++.+++. .+.++++|||.||.+|++.|
T Consensus 138 ~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 138 PEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred CCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 4467899988887654 45799999999999999875
No 79
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=98.03 E-value=2.8e-05 Score=83.12 Aligned_cols=142 Identities=11% Similarity=0.150 Sum_probs=88.4
Q ss_pred CCCcchHHHHHHHHh-cCCeEEEEcCCCHHHHHHHHHHcCCC--CCCC-CC--Ccc------------------------
Q 047874 564 PCRPGVRAAVESCRN-AGVNVKMVTGDNVHTARAIAIECGIL--NPDV-DL--NKD------------------------ 613 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~-aGi~v~i~TGd~~~~a~~ia~~~gi~--~~~~-~~--~~~------------------------ 613 (941)
.+.++++++|++|++ .|++++++|||+...+..+.+.+++. ..+- .. ...
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 456899999999998 79999999999999999888777642 1110 00 000
Q ss_pred ------------cceecchhcccCCHHH---HHHh----hcCce-----EEEecCH--HHHHHHHHHHHhC----CCEEE
Q 047874 614 ------------EAVIEGVQFRSLSAEE---RIAK----IESIR-----VMARSSP--LDKLLMVQSLKQK----GHVVA 663 (941)
Q Consensus 614 ------------~~~~~g~~~~~~~~~~---~~~~----~~~~~-----v~~~~~p--~~K~~iv~~l~~~----g~~v~ 663 (941)
..+....... ...+. +.+. ..... -+....| .+|...++.+.+. ...++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~-~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~ 194 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAP-QHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPV 194 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCC-ccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEE
Confidence 0000000000 00111 1111 11111 1222233 4888888877654 46799
Q ss_pred EEcCCccCHHHHHhC----CccEEecCCCcHHHHhccCEEeccCCchHHHHHHH
Q 047874 664 VTGDGTNDAPALRAA----DIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLR 713 (941)
Q Consensus 664 ~iGDg~ND~~~l~~A----~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 713 (941)
++||+.||.+||+.+ +.||+|| ++. ..|++.+. +...+.+.+.
T Consensus 195 ~~GD~~nD~~mf~~~~~~~g~~vavg-~a~----~~A~~~l~--~~~~v~~~L~ 241 (266)
T PRK10187 195 FVGDDLTDEAGFAVVNRLGGISVKVG-TGA----TQASWRLA--GVPDVWSWLE 241 (266)
T ss_pred EEcCCccHHHHHHHHHhcCCeEEEEC-CCC----CcCeEeCC--CHHHHHHHHH
Confidence 999999999999999 9999999 664 34778776 5666665553
No 80
>PTZ00174 phosphomannomutase; Provisional
Probab=97.99 E-value=2.8e-05 Score=82.44 Aligned_cols=54 Identities=22% Similarity=0.307 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHhCCCEEEEEcC----CccCHHHHHhC-CccEEecCCCcHHHHhccCEEe
Q 047874 646 LDKLLMVQSLKQKGHVVAVTGD----GTNDAPALRAA-DIGLSMGIQGTEVAKESSDIVI 700 (941)
Q Consensus 646 ~~K~~iv~~l~~~g~~v~~iGD----g~ND~~~l~~A-~vgIam~~~~~~~a~~~ad~vl 700 (941)
.+|+..++.+.++.+.|+++|| |.||.+||+.| -.|++++ |+.+..|..+.++.
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELFL 245 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHhc
Confidence 4799999999888889999999 99999999977 5778888 89998888776543
No 81
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.97 E-value=4.5e-05 Score=79.35 Aligned_cols=127 Identities=22% Similarity=0.376 Sum_probs=92.9
Q ss_pred cCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEE
Q 047874 562 KDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMA 641 (941)
Q Consensus 562 ~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~ 641 (941)
...+-++++++++.|+++|++..++|+++...+..+.+..|+...- ..++.+... -..
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F------~~i~g~~~~----------------~~~ 144 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYF------DVIVGGDDV----------------PPP 144 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcccc------ceEEcCCCC----------------CCC
Confidence 4457799999999999999999999999999999999999997631 111111111 011
Q ss_pred ecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCC---ccEEecCC-CcHHHHhccCEEeccCCchHHHHHH
Q 047874 642 RSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAAD---IGLSMGIQ-GTEVAKESSDIVIMDDNFSSVVTVL 712 (941)
Q Consensus 642 ~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~---vgIam~~~-~~~~a~~~ad~vl~~~~~~~i~~~i 712 (941)
+-.|.......+.+....+.++||||..+|..|=++|+ +|+..|.+ ........+|+++. ++..+...+
T Consensus 145 KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~--~~~el~~~l 217 (220)
T COG0546 145 KPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVID--SLAELLALL 217 (220)
T ss_pred CcCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEEC--CHHHHHHHH
Confidence 22456666666666655458999999999999999998 66777743 34556667999987 666666544
No 82
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=97.96 E-value=5.1e-05 Score=79.41 Aligned_cols=129 Identities=24% Similarity=0.341 Sum_probs=89.9
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEe
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMAR 642 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 642 (941)
.++.|++.+.++.|+++|+++.++||........+.+.+|+...- ..++.+.... ...
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f------~~~~~~~~~~----------------~~k 149 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF------SVVIGGDSLP----------------NKK 149 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc------cEEEcCCCCC----------------CCC
Confidence 357899999999999999999999999999999999999986421 1122221110 011
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCc-cEEec--CC-CcHHHHhccCEEeccCCchHHHHHHHHH
Q 047874 643 SSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADI-GLSMG--IQ-GTEVAKESSDIVIMDDNFSSVVTVLRWG 715 (941)
Q Consensus 643 ~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~v-gIam~--~~-~~~~a~~~ad~vl~~~~~~~i~~~i~~g 715 (941)
-.|+--..+++.++...+.++++||+.||+.+.+.||+ +|.+. .+ ..+.....+|+++. ++..+...+.++
T Consensus 150 p~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~--~~~~l~~~l~~~ 224 (226)
T PRK13222 150 PDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVID--HFAELLPLLGLA 224 (226)
T ss_pred cChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEEC--CHHHHHHHHHHh
Confidence 12333344555555556789999999999999999999 55554 11 22344557888884 788888776543
No 83
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.96 E-value=3.4e-05 Score=80.94 Aligned_cols=43 Identities=5% Similarity=-0.006 Sum_probs=39.4
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILN 605 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~ 605 (941)
+...+.++++|++|+++||.|+++||+.......+.+++|+..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 4466779999999999999999999999999999999999975
No 84
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.94 E-value=2.7e-05 Score=78.87 Aligned_cols=114 Identities=12% Similarity=0.126 Sum_probs=76.5
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEe
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMAR 642 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 642 (941)
-++.+++.+.++.|++.|+++.++|+.+......+.+..|+... ...++++....+- .........++..+..
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~------f~~i~~~~~~~~~-~g~~~~~~~~~~~~~~ 143 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDV------FIEIYSNPASFDN-DGRHIVWPHHCHGCCS 143 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhh------eeEEeccCceECC-CCcEEEecCCCCccCc
Confidence 36889999999999999999999999999999999999998642 1112221111000 0000000000001111
Q ss_pred -cCHHHHHHHHHHHHhC-CCEEEEEcCCccCHHHHHhCCccEE
Q 047874 643 -SSPLDKLLMVQSLKQK-GHVVAVTGDGTNDAPALRAADIGLS 683 (941)
Q Consensus 643 -~~p~~K~~iv~~l~~~-g~~v~~iGDg~ND~~~l~~A~vgIa 683 (941)
.....|.++++.++++ .+.++++|||.||..|.++||+-.|
T Consensus 144 ~~~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 144 CPCGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 1123589999999887 8899999999999999999987654
No 85
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.88 E-value=3.7e-05 Score=72.93 Aligned_cols=118 Identities=19% Similarity=0.201 Sum_probs=76.7
Q ss_pred eccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceE
Q 047874 560 GLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRV 639 (941)
Q Consensus 560 ~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v 639 (941)
.-..++.+++.+.+++|+++|++++++||+....+....+.+|+.... ..++.......-..............
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~------~~i~~~~~~~~~~~~~~~~~~~~~~~ 93 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYF------DPVITSNGAAIYYPKEGLFLGGGPFD 93 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhh------hheeccchhhhhcccccccccccccc
Confidence 345588999999999999999999999999999999999999984321 11111110000000000000011113
Q ss_pred EEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCC-ccEE
Q 047874 640 MARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAAD-IGLS 683 (941)
Q Consensus 640 ~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~-vgIa 683 (941)
+.+-.++.+..+.+.+....+.++++||+.+|.+|.+.++ -+|+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 94 IGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred cCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 3345566666777776666678999999999999999843 3443
No 86
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=97.85 E-value=8.9e-05 Score=86.50 Aligned_cols=40 Identities=10% Similarity=0.089 Sum_probs=37.0
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCC
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGIL 604 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~ 604 (941)
.-+.+.++|++++++|+.++++|||....+..+++++|+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 4567899999999999999999999999999999999975
No 87
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.85 E-value=7.8e-05 Score=76.72 Aligned_cols=125 Identities=21% Similarity=0.252 Sum_probs=84.7
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.++++.|+++|+++.++|+.....+....+.+|+...- ..++...+. ...+-
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f------~~i~~~~~~----------------~~~KP 132 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLF------DHVIGSDEV----------------PRPKP 132 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhe------eeEEecCcC----------------CCCCC
Confidence 57899999999999999999999999999999999999986410 111111110 01122
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccE-Ee--cC-CCcHHHHhccCEEeccCCchHHHHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGL-SM--GI-QGTEVAKESSDIVIMDDNFSSVVTVL 712 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgI-am--~~-~~~~~a~~~ad~vl~~~~~~~i~~~i 712 (941)
.|+--..+++.++-..+.+++|||+.+|..+-++||+.. ++ |. +..+..+..+|+++. ++..+..++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~--~~~~l~~~~ 203 (205)
T TIGR01454 133 APDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLR--KPQSLLALC 203 (205)
T ss_pred ChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeC--CHHHHHHHh
Confidence 333334444555444678999999999999999999853 23 21 222345677999875 566665544
No 88
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=97.64 E-value=0.00013 Score=77.08 Aligned_cols=68 Identities=19% Similarity=0.231 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHH-----HHhcc---C-EEeccCCchHHHHHH
Q 047874 646 LDKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEV-----AKESS---D-IVIMDDNFSSVVTVL 712 (941)
Q Consensus 646 ~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~-----a~~~a---d-~vl~~~~~~~i~~~i 712 (941)
.+|...++.++++ .+.|+++||+.||.+||..++-||.++ |+.+. ..... . |....+.-.||.+.+
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~-Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl 242 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVG-NAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGL 242 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-T-TS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEc-CCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHH
Confidence 5799999999876 347888999999999999999999999 88777 22222 2 344455566777766
Q ss_pred HH
Q 047874 713 RW 714 (941)
Q Consensus 713 ~~ 714 (941)
++
T Consensus 243 ~~ 244 (247)
T PF05116_consen 243 QH 244 (247)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 89
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=97.53 E-value=0.00028 Score=72.50 Aligned_cols=39 Identities=28% Similarity=0.391 Sum_probs=36.0
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcC
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECG 602 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~g 602 (941)
++.+.+.++|++|++.|++++++|||....+..+.++++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 477899999999999999999999999999999998854
No 90
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.53 E-value=0.00049 Score=71.34 Aligned_cols=124 Identities=19% Similarity=0.197 Sum_probs=83.8
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecC
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSS 644 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 644 (941)
+.+++.++++.|+++|+++.++|+.....+..+.+..|+... ...++.+.... ..+-.
T Consensus 83 ~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~------f~~i~~~~~~~----------------~~Kp~ 140 (214)
T PRK13288 83 EYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEF------FDVVITLDDVE----------------HAKPD 140 (214)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhc------eeEEEecCcCC----------------CCCCC
Confidence 679999999999999999999999999999999999998642 11122111110 01223
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc-EEe--cCCCcH-HHHhccCEEeccCCchHHHHHH
Q 047874 645 PLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG-LSM--GIQGTE-VAKESSDIVIMDDNFSSVVTVL 712 (941)
Q Consensus 645 p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam--~~~~~~-~a~~~ad~vl~~~~~~~i~~~i 712 (941)
|+--.++.+.+.-....+++|||+.+|..+-++||+- |++ |....+ .....+|+++. ++..+..++
T Consensus 141 p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~--~~~~l~~~i 210 (214)
T PRK13288 141 PEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLD--KMSDLLAIV 210 (214)
T ss_pred cHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEEC--CHHHHHHHH
Confidence 4444455555544456899999999999999999984 233 311122 23446888876 677766554
No 91
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.51 E-value=0.00068 Score=71.54 Aligned_cols=132 Identities=16% Similarity=0.262 Sum_probs=84.0
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCC------CcccceecchhcccCCHHHHHHhhcC
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDL------NKDEAVIEGVQFRSLSAEERIAKIES 636 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~------~~~~~~~~g~~~~~~~~~~~~~~~~~ 636 (941)
-+++||+.+.++.|+++|+++.++||-....+..+.+++|+..++... -...-++.|.. ..
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~-~P------------ 186 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFK-GP------------ 186 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCC-CC------------
Confidence 357999999999999999999999999999999999999986543211 00112222211 00
Q ss_pred ceEEEecCHHHHHHHHHH-----HH--hCCCEEEEEcCCccCHHHHHhC---CccEEecC-CCc-----HHHHhccCEEe
Q 047874 637 IRVMARSSPLDKLLMVQS-----LK--QKGHVVAVTGDGTNDAPALRAA---DIGLSMGI-QGT-----EVAKESSDIVI 700 (941)
Q Consensus 637 ~~v~~~~~p~~K~~iv~~-----l~--~~g~~v~~iGDg~ND~~~l~~A---~vgIam~~-~~~-----~~a~~~ad~vl 700 (941)
.+ ....|.+.+.. +. .....|+++|||.||++|..-. .--+.+|- |.. +.-+++-|+|+
T Consensus 187 -~i----~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl 261 (277)
T TIGR01544 187 -LI----HTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVL 261 (277)
T ss_pred -cc----cccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEE
Confidence 01 11345544432 22 2246799999999999995433 11233331 222 23567889999
Q ss_pred ccCCchHHHHHH
Q 047874 701 MDDNFSSVVTVL 712 (941)
Q Consensus 701 ~~~~~~~i~~~i 712 (941)
.+|.--.++..|
T Consensus 262 ~~D~t~~v~~~i 273 (277)
T TIGR01544 262 VQDETLEVANSI 273 (277)
T ss_pred ECCCCchHHHHH
Confidence 988766666554
No 92
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.50 E-value=0.00037 Score=72.13 Aligned_cols=122 Identities=21% Similarity=0.264 Sum_probs=80.4
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.++++.|+++|+++.++|+.+...+..+.+..|+...- ..++.+.... ..+-
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f------~~~~~~~~~~----------------~~Kp 142 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF------SVLIGGDSLA----------------QRKP 142 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC------cEEEecCCCC----------------CCCC
Confidence 47899999999999999999999999999999999999986421 1111111110 0111
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEE-e--cCCC-cHHHHhccCEEeccCCchHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLS-M--GIQG-TEVAKESSDIVIMDDNFSSVV 709 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIa-m--~~~~-~~~a~~~ad~vl~~~~~~~i~ 709 (941)
.|+-=....+.+.-..+.++++||+.+|..+.++||+-.. + |... .+.....+|+++. ++..+.
T Consensus 143 ~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~--~~~~l~ 210 (213)
T TIGR01449 143 HPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYD--SLNELP 210 (213)
T ss_pred ChHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeC--CHHHHH
Confidence 2232233444444445679999999999999999998643 4 2111 1233356888875 555544
No 93
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.50 E-value=0.00053 Score=73.72 Aligned_cols=126 Identities=19% Similarity=0.270 Sum_probs=82.6
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEe
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMAR 642 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 642 (941)
.++.+++.++++.|+++|+++.++|+.+...+..+.++.|+... ...+..+.... ..+
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~------f~~i~~~d~~~----------------~~K 157 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRY------FRWIIGGDTLP----------------QKK 157 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhh------CeEEEecCCCC----------------CCC
Confidence 35789999999999999999999999999999989988888531 01121111100 001
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCc-cEEec--CC-CcHHHHhccCEEeccCCchHHHHHH
Q 047874 643 SSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADI-GLSMG--IQ-GTEVAKESSDIVIMDDNFSSVVTVL 712 (941)
Q Consensus 643 ~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~v-gIam~--~~-~~~~a~~~ad~vl~~~~~~~i~~~i 712 (941)
-.|+--..+.+.+.-..+.+++|||+.||..+.+.||+ .+++. .+ ..+.....+|+++. ++..+.+++
T Consensus 158 p~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~--~l~el~~~~ 229 (272)
T PRK13223 158 PDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVID--DLRALLPGC 229 (272)
T ss_pred CCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEEC--CHHHHHHHH
Confidence 12222233334443345689999999999999999998 34443 11 22234457898885 666666543
No 94
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=97.46 E-value=0.00074 Score=83.09 Aligned_cols=61 Identities=26% Similarity=0.349 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHhC--CCEEEEEcCCccCHHHHHhC---CccEEecCCCcHHHHhccCEEeccCCchHHHHHHH
Q 047874 646 LDKLLMVQSLKQK--GHVVAVTGDGTNDAPALRAA---DIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLR 713 (941)
Q Consensus 646 ~~K~~iv~~l~~~--g~~v~~iGDg~ND~~~l~~A---~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 713 (941)
.+|+..++.+.+. .+.|+++||+.||.+||+.+ +.+|+|| ++ +.+|++.+.+. +.+...++
T Consensus 656 vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG-~~----~s~A~~~l~~~--~eV~~~L~ 721 (726)
T PRK14501 656 VNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVG-PG----ESRARYRLPSQ--REVRELLR 721 (726)
T ss_pred CCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEEC-CC----CCcceEeCCCH--HHHHHHHH
Confidence 5899999888874 35899999999999999996 6899998 53 56789999854 55665554
No 95
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.34 E-value=0.00075 Score=70.37 Aligned_cols=122 Identities=16% Similarity=0.221 Sum_probs=78.4
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.|++.++++.|+++|+++.++|+........+.+++|+..-- ..++.+.... ..+-
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f------~~~~~~~~~~----------------~~Kp 149 (222)
T PRK10826 92 PLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYF------DALASAEKLP----------------YSKP 149 (222)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcc------cEEEEcccCC----------------CCCC
Confidence 57799999999999999999999999999999999999986521 1122221110 0112
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCc---HHHHhccCEEeccCCchHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGT---EVAKESSDIVIMDDNFSSVV 709 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~---~~a~~~ad~vl~~~~~~~i~ 709 (941)
.|+-=..+.+.+.-..+.++++||+.||+.+-+.||+....-..+. +.-...+|+++. ++..+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~--~~~dl~ 216 (222)
T PRK10826 150 HPEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLE--SLTELT 216 (222)
T ss_pred CHHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheecc--CHHHHh
Confidence 2332222333333234679999999999999999998643321221 122335677664 444443
No 96
>PRK11590 hypothetical protein; Provisional
Probab=97.32 E-value=0.0019 Score=66.71 Aligned_cols=106 Identities=13% Similarity=0.105 Sum_probs=74.9
Q ss_pred CCCcchHHHH-HHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEe
Q 047874 564 PCRPGVRAAV-ESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMAR 642 (941)
Q Consensus 564 ~~~~~~~~~I-~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 642 (941)
.+.|++.+.| +.+++.|++++++|+....-+..+++.+|+.... .++ |.+++.. ......-..
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~-------~~i-~t~l~~~--------~tg~~~g~~ 158 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRV-------NLI-ASQMQRR--------YGGWVLTLR 158 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccC-------ceE-EEEEEEE--------EccEECCcc
Confidence 3479999999 5788899999999999999999999999962210 111 2222110 000001123
Q ss_pred cCHHHHHHHHHHH-HhCCCEEEEEcCCccCHHHHHhCCccEEec
Q 047874 643 SSPLDKLLMVQSL-KQKGHVVAVTGDGTNDAPALRAADIGLSMG 685 (941)
Q Consensus 643 ~~p~~K~~iv~~l-~~~g~~v~~iGDg~ND~~~l~~A~vgIam~ 685 (941)
|..++|..-++.. ........+-||+.||.|||+.|+-.++++
T Consensus 159 c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 159 CLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred CCChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 5668898877755 333455678999999999999999999996
No 97
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.32 E-value=0.00097 Score=68.56 Aligned_cols=106 Identities=12% Similarity=0.132 Sum_probs=74.8
Q ss_pred CCCcchHHHHH-HHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEe
Q 047874 564 PCRPGVRAAVE-SCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMAR 642 (941)
Q Consensus 564 ~~~~~~~~~I~-~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 642 (941)
.+.|++.+.|+ .++++|++++++|+-....+..+|+..++.... .++ |.+++.... ....-..
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~-------~~i-~t~le~~~g--------g~~~g~~ 157 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL-------NLI-ASQIERGNG--------GWVLPLR 157 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC-------cEE-EEEeEEeCC--------ceEcCcc
Confidence 46899999996 788899999999999999999999997664311 111 222211000 0001223
Q ss_pred cCHHHHHHHHHHHH-hCCCEEEEEcCCccCHHHHHhCCccEEec
Q 047874 643 SSPLDKLLMVQSLK-QKGHVVAVTGDGTNDAPALRAADIGLSMG 685 (941)
Q Consensus 643 ~~p~~K~~iv~~l~-~~g~~v~~iGDg~ND~~~l~~A~vgIam~ 685 (941)
|..++|..-++..- ...+...+-||+.||.|||+.||-.++++
T Consensus 158 c~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 158 CLGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred CCChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 56688988776553 23345678999999999999999999996
No 98
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.30 E-value=0.00092 Score=65.79 Aligned_cols=147 Identities=22% Similarity=0.315 Sum_probs=93.5
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCC---Cccc-ceecchh---------cccCCHHHH
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDL---NKDE-AVIEGVQ---------FRSLSAEER 630 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~---~~~~-~~~~g~~---------~~~~~~~~~ 630 (941)
++-|++.++++.|++. ...+++|-.-.+-+.++|.-+|++..+.+. +-++ .+.++.- ...++.+++
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 3569999999999876 445555656667789999999997644321 1010 0111100 111122222
Q ss_pred HHhhcCceEEEecCHHH---------------HHHHHHHHHhC---CCEEEEEcCCccCHHHHHhCC-cc-EEecCCCcH
Q 047874 631 IAKIESIRVMARSSPLD---------------KLLMVQSLKQK---GHVVAVTGDGTNDAPALRAAD-IG-LSMGIQGTE 690 (941)
Q Consensus 631 ~~~~~~~~v~~~~~p~~---------------K~~iv~~l~~~---g~~v~~iGDg~ND~~~l~~A~-vg-Iam~~~~~~ 690 (941)
...+.. +|.|..|.+ |.++++.+.+. ....+++||++.|+.||+.+. -| +|+.-||.+
T Consensus 162 fe~lDe--~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNe 239 (315)
T COG4030 162 FEKLDE--LFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNE 239 (315)
T ss_pred HHHHHH--HHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCc
Confidence 222221 566666654 44555555443 335789999999999999873 33 666668999
Q ss_pred HHHhccCEEeccCCchHHHHHHH
Q 047874 691 VAKESSDIVIMDDNFSSVVTVLR 713 (941)
Q Consensus 691 ~a~~~ad~vl~~~~~~~i~~~i~ 713 (941)
-+...||+.+.+.+..+...+|+
T Consensus 240 Yal~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 240 YALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred ccccccceEEeccchhhhhHHHH
Confidence 99999999999888888777664
No 99
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.28 E-value=0.0022 Score=68.78 Aligned_cols=122 Identities=16% Similarity=0.175 Sum_probs=81.5
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+... ...++.+.... .
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~------F~~vi~~~~~~-------------------~ 196 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSL------FSVVQAGTPIL-------------------S 196 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhh------eEEEEecCCCC-------------------C
Confidence 4679999999999999999999999999999999999998642 11222221100 0
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccE-Eec--CCCcH-HHHhccCEEeccCCchHHHHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGL-SMG--IQGTE-VAKESSDIVIMDDNFSSVVTVL 712 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgI-am~--~~~~~-~a~~~ad~vl~~~~~~~i~~~i 712 (941)
.|+--..+++.+.-..+.+++|||+.+|+.+-++|++-. ++. .+..+ .....+|+++. ++..+..++
T Consensus 197 k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~--~~~eL~~~~ 267 (273)
T PRK13225 197 KRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLE--TPSDLLQAV 267 (273)
T ss_pred CHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEEC--CHHHHHHHH
Confidence 122112222333323567999999999999999999853 332 11111 23446899885 677776654
No 100
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=97.26 E-value=0.0016 Score=69.16 Aligned_cols=119 Identities=18% Similarity=0.140 Sum_probs=82.2
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.|++.++++.|+++|+++.++|+.....+....+.+|+... ...++.+.+.. ..+-
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~------Fd~iv~~~~~~----------------~~KP 165 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDF------FQAVIIGSECE----------------HAKP 165 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhh------CcEEEecCcCC----------------CCCC
Confidence 4678999999999999999999999999999999999998742 12233333211 1122
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc-EEecC-CCcH-HHHhccCEEeccCC
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG-LSMGI-QGTE-VAKESSDIVIMDDN 704 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~-~~~~-~a~~~ad~vl~~~~ 704 (941)
.|+--..+.+.+.-..+.+++|||+.+|..+-++|++- |++.. ...+ .....+|+++.+..
T Consensus 166 ~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~ 229 (248)
T PLN02770 166 HPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYE 229 (248)
T ss_pred ChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccch
Confidence 34444455555555567899999999999999999984 33421 1112 22346888887443
No 101
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=97.23 E-value=0.0019 Score=68.82 Aligned_cols=122 Identities=11% Similarity=0.135 Sum_probs=82.8
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.+.++.|+++|+++.++|+.+...+..+.+.+|+... ...++.+.+.. ..+-
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~------Fd~ii~~~d~~----------------~~KP 166 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGF------FSVVLAAEDVY----------------RGKP 166 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhh------CcEEEecccCC----------------CCCC
Confidence 4679999999999999999999999999999999999998642 12333333211 1122
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc-EEecCCCcHHHHhccCEEeccCCchHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG-LSMGIQGTEVAKESSDIVIMDDNFSSVV 709 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~~~~a~~~ad~vl~~~~~~~i~ 709 (941)
.|+-=...++.+.-....+++|||+.+|+.+-++||+- |++...........+|+++. ++..+.
T Consensus 167 ~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~--~~~el~ 231 (260)
T PLN03243 167 DPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVR--RLDDLS 231 (260)
T ss_pred CHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeC--CHHHHH
Confidence 33333444555554566799999999999999999984 34432232333345788765 444443
No 102
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.22 E-value=0.0019 Score=67.59 Aligned_cols=124 Identities=19% Similarity=0.146 Sum_probs=83.7
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.|++.+.++.|+++|+++.++|+.+...+..+.+.+|+... ...++.+.... ..+-
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~------f~~i~~~~~~~----------------~~KP 152 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQR------CAVLIGGDTLA----------------ERKP 152 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhc------ccEEEecCcCC----------------CCCC
Confidence 4679999999999999999999999999888888888888642 11222221110 1122
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc-EEecC-C--C-cHHHHhccCEEeccCCchHHHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG-LSMGI-Q--G-TEVAKESSDIVIMDDNFSSVVTV 711 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~-~--~-~~~a~~~ad~vl~~~~~~~i~~~ 711 (941)
.|+-=..+++.+.-..+.+++|||+.||..+-+.||+. |++.. . . .......+|+++. ++..+.+.
T Consensus 153 ~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~--~~~el~~~ 223 (229)
T PRK13226 153 HPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVE--QPQLLWNP 223 (229)
T ss_pred CHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeC--CHHHHHHH
Confidence 34444455566655567899999999999999999986 33321 1 1 1123456888885 55555543
No 103
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=97.20 E-value=0.002 Score=62.88 Aligned_cols=103 Identities=19% Similarity=0.274 Sum_probs=68.4
Q ss_pred cCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHH---HHHHHc---C--CCCCCCCCCcccceec-chhcccCCHHHHHH
Q 047874 562 KDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTAR---AIAIEC---G--ILNPDVDLNKDEAVIE-GVQFRSLSAEERIA 632 (941)
Q Consensus 562 ~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~---~ia~~~---g--i~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~ 632 (941)
+|...+++++++++++++|++++++|||+...+. ...+++ | ++.. ..+.. |..+.....
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g-------~li~~~g~~~~~~~~----- 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHG-------PVLLSPDRLFAALHR----- 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCc-------eEEEcCCcchhhhhc-----
Confidence 4678999999999999999999999999998874 555552 2 3321 11211 111110000
Q ss_pred hhcCceEEEecCHHHHHHHHHHHHh-----CCCEEEEEcCCccCHHHHHhCCcc
Q 047874 633 KIESIRVMARSSPLDKLLMVQSLKQ-----KGHVVAVTGDGTNDAPALRAADIG 681 (941)
Q Consensus 633 ~~~~~~v~~~~~p~~K~~iv~~l~~-----~g~~v~~iGDg~ND~~~l~~A~vg 681 (941)
.+..+..-+.|.+.++.+.+ ....++.+||+.+|+.+-+++++-
T Consensus 93 -----e~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 93 -----EVISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred -----ccccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 12222222348888888876 356778899999999999987664
No 104
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=97.15 E-value=0.0025 Score=67.98 Aligned_cols=100 Identities=18% Similarity=0.172 Sum_probs=69.4
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.|++.+.++.|+++|+++.++|+.....+..+.+++|+.... ...++.+.+.. ..+-
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f-----~d~ii~~~~~~----------------~~KP 157 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYR-----PDYNVTTDDVP----------------AGRP 157 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCC-----CceEEccccCC----------------CCCC
Confidence 35789999999999999999999999999999999999886421 01222222210 1112
Q ss_pred CHHHHHHHHHHHHhC-CCEEEEEcCCccCHHHHHhCCcc-EEe
Q 047874 644 SPLDKLLMVQSLKQK-GHVVAVTGDGTNDAPALRAADIG-LSM 684 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~-g~~v~~iGDg~ND~~~l~~A~vg-Iam 684 (941)
.|+-=....+.+.-. .+.+++|||+.+|..+-+.||+- |++
T Consensus 158 ~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v 200 (253)
T TIGR01422 158 APWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTVGL 200 (253)
T ss_pred CHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEEEE
Confidence 333333444444432 45699999999999999999974 444
No 105
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=97.07 E-value=0.0028 Score=65.96 Aligned_cols=123 Identities=24% Similarity=0.279 Sum_probs=80.6
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCC--CCCCCCCcccceecchhcccCCHHHHHHhhcCceEE
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGIL--NPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVM 640 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ 640 (941)
.++.+|+.+.++.|+++|+++.++|+.....+..+.+.+|+. .. ...++.+.+.. .
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~------f~~i~~~~~~~----------------~ 143 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDD------VDAVVCPSDVA----------------A 143 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhcc------CCEEEcCCcCC----------------C
Confidence 368899999999999999999999999999999999999986 21 11222222110 0
Q ss_pred EecCHHHHHHHHHHHHhC-CCEEEEEcCCccCHHHHHhCCccE--EecCCCc---H-HHHhccCEEeccCCchHHHH
Q 047874 641 ARSSPLDKLLMVQSLKQK-GHVVAVTGDGTNDAPALRAADIGL--SMGIQGT---E-VAKESSDIVIMDDNFSSVVT 710 (941)
Q Consensus 641 ~~~~p~~K~~iv~~l~~~-g~~v~~iGDg~ND~~~l~~A~vgI--am~~~~~---~-~a~~~ad~vl~~~~~~~i~~ 710 (941)
.+-.|+-=....+.+.-. .+.+++|||+.+|..+-+.||+.. ++. .+. + .....+|+++. ++..+..
T Consensus 144 ~KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~-~g~~~~~~~~~~~~~~~i~--~~~~l~~ 217 (220)
T TIGR03351 144 GRPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVL-TGAHDAEELSRHPHTHVLD--SVADLPA 217 (220)
T ss_pred CCCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEe-cCCCcHHHHhhcCCceeec--CHHHHHH
Confidence 112233223333333322 367999999999999999999986 332 221 1 22345777764 4555543
No 106
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=97.02 E-value=0.0017 Score=67.48 Aligned_cols=92 Identities=20% Similarity=0.265 Sum_probs=64.1
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCC----HHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceE
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDN----VHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRV 639 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~----~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v 639 (941)
.+.+++++.++.+++.|+++.++|||. ..++..+.+..|+...+. ...++.|...
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~----f~vil~gd~~----------------- 172 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNM----NPVIFAGDKP----------------- 172 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccc----eeEEEcCCCC-----------------
Confidence 367889999999999999999999975 568899999999953211 1122222110
Q ss_pred EEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc-EEe
Q 047874 640 MARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG-LSM 684 (941)
Q Consensus 640 ~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam 684 (941)
...+|.. .+++.+ .++++||..+|..+-+.||+- |.+
T Consensus 173 ----~K~~K~~---~l~~~~-i~I~IGDs~~Di~aA~~AGi~~I~v 210 (237)
T PRK11009 173 ----GQYTKTQ---WLKKKN-IRIFYGDSDNDITAAREAGARGIRI 210 (237)
T ss_pred ----CCCCHHH---HHHhcC-CeEEEcCCHHHHHHHHHcCCcEEEE
Confidence 0133444 334444 488999999999999999984 444
No 107
>PRK11587 putative phosphatase; Provisional
Probab=97.02 E-value=0.0038 Score=64.83 Aligned_cols=114 Identities=20% Similarity=0.230 Sum_probs=76.1
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.|++.+.++.|+++|+++.++|+.+...+...-+..|+... ..++.+.... ...-
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~-------~~i~~~~~~~----------------~~KP 139 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP-------EVFVTAERVK----------------RGKP 139 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc-------cEEEEHHHhc----------------CCCC
Confidence 4679999999999999999999999988777777777777321 1222222110 1112
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc-EEecCCCc-HHHHhccCEEec
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG-LSMGIQGT-EVAKESSDIVIM 701 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~~-~~a~~~ad~vl~ 701 (941)
.|+-=....+.+.-..+.+++|||+.+|+.+-+.||+- |++. .+. ......+|+++.
T Consensus 140 ~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~-~~~~~~~~~~~~~~~~ 198 (218)
T PRK11587 140 EPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVN-APADTPRLDEVDLVLH 198 (218)
T ss_pred CcHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEEC-CCCchhhhccCCEEec
Confidence 33333444444544467899999999999999999984 6665 332 223345777765
No 108
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=97.00 E-value=0.0015 Score=68.03 Aligned_cols=88 Identities=19% Similarity=0.211 Sum_probs=62.1
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCC----CHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEE
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGD----NVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVM 640 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd----~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ 640 (941)
+.+++++.++.++++|+++.++|++ ...++..+.+.+|+... ...++.+.....
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~------f~~i~~~d~~~~---------------- 172 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAM------NPVIFAGDKPGQ---------------- 172 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchh------eeEEECCCCCCC----------------
Confidence 4455999999999999999999999 77799999999999642 112222221100
Q ss_pred EecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc
Q 047874 641 ARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG 681 (941)
Q Consensus 641 ~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg 681 (941)
..| +|. ..+++.+ .++++||..||..+-+.|++-
T Consensus 173 --~Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 173 --YQY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred --CCC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 012 232 2344444 479999999999999999874
No 109
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.95 E-value=0.0025 Score=65.03 Aligned_cols=94 Identities=18% Similarity=0.131 Sum_probs=68.2
Q ss_pred cCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEE
Q 047874 562 KDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMA 641 (941)
Q Consensus 562 ~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~ 641 (941)
.+++.+++.++++.|+++|+++.++||.+...+..+.+.+|+... ...++.+.. +..
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~------f~~~~~~~~-----------------~~~ 160 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEIL------FPVQIWMED-----------------CPP 160 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhh------CCEEEeecC-----------------CCC
Confidence 344667789999999999999999999999999999999998642 112222211 111
Q ss_pred ecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhC
Q 047874 642 RSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAA 678 (941)
Q Consensus 642 ~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A 678 (941)
+-.|+--..+++.+.-..+.+++|||+.+|+.+-++|
T Consensus 161 KP~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 161 KPNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred CcCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 3345554556666665667899999999999887654
No 110
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=96.93 E-value=0.0048 Score=66.31 Aligned_cols=96 Identities=15% Similarity=0.094 Sum_probs=65.1
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++-|++.++++.|+++|+++.++||.....+..+-+..|+.... ...++.+.... ..+-
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~-----~d~i~~~~~~~----------------~~KP 159 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYR-----PDHVVTTDDVP----------------AGRP 159 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCC-----ceEEEcCCcCC----------------CCCC
Confidence 46789999999999999999999999999888888887765420 01122221110 0112
Q ss_pred CHHHHHHHHHHHHhC-CCEEEEEcCCccCHHHHHhCCc
Q 047874 644 SPLDKLLMVQSLKQK-GHVVAVTGDGTNDAPALRAADI 680 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~-g~~v~~iGDg~ND~~~l~~A~v 680 (941)
.|+-=....+.+.-. .+.+++|||+.+|..+-+.||+
T Consensus 160 ~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 160 YPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred ChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence 233323333333322 3579999999999999999997
No 111
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=96.78 E-value=0.0066 Score=67.34 Aligned_cols=120 Identities=14% Similarity=0.150 Sum_probs=82.1
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+|+.+.++.|+++|+++.++|+.....+..+-+.+|+..- ...++.+.+.. ...-
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~y------Fd~Iv~sddv~----------------~~KP 273 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGF------FSVIVAAEDVY----------------RGKP 273 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHH------ceEEEecCcCC----------------CCCC
Confidence 3679999999999999999999999999999999999998642 11222222211 0112
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc-EEecCCCcHH-HHhccCEEeccCCchHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG-LSMGIQGTEV-AKESSDIVIMDDNFSSV 708 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~~~~-a~~~ad~vl~~~~~~~i 708 (941)
.|+-=...++.+.-..+.+++|||+.+|+.+-+.|++- |++. .+... ....+|+++. ++..+
T Consensus 274 ~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~-~~~~~~~l~~Ad~iI~--s~~EL 337 (381)
T PLN02575 274 DPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVA-SKHPIYELGAADLVVR--RLDEL 337 (381)
T ss_pred CHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEC-CCCChhHhcCCCEEEC--CHHHH
Confidence 33333445555555577899999999999999999984 4444 32222 2234788765 44444
No 112
>PLN02580 trehalose-phosphatase
Probab=96.75 E-value=0.012 Score=65.15 Aligned_cols=63 Identities=19% Similarity=0.230 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHhC-C---C---EEEEEcCCccCHHHHHh-----CCccEEecCCCcHHHHhccCEEeccCCchHHHHHHH
Q 047874 646 LDKLLMVQSLKQK-G---H---VVAVTGDGTNDAPALRA-----ADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLR 713 (941)
Q Consensus 646 ~~K~~iv~~l~~~-g---~---~v~~iGDg~ND~~~l~~-----A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 713 (941)
.+|...++.+.+. | . .++++||+.||.+||+. +++||+|+ ++... -.|++.+. +...+...++
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg-n~~~~--t~A~y~L~--dp~eV~~~L~ 374 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS-SVPKE--SNAFYSLR--DPSEVMEFLK 374 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe-cCCCC--ccceEEcC--CHHHHHHHHH
Confidence 3899988888764 2 1 25899999999999996 69999998 65432 25788876 5666766664
No 113
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=96.63 E-value=0.013 Score=58.81 Aligned_cols=127 Identities=17% Similarity=0.135 Sum_probs=72.2
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCH---------------HHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHH
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNV---------------HTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEE 629 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~ 629 (941)
+.+|+.+++++|+++|+++.++|+.+. .....+.+..|+... .++.......
T Consensus 30 ~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~--------~i~~~~~~~~----- 96 (181)
T PRK08942 30 PIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD--------GIYYCPHHPE----- 96 (181)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc--------eEEECCCCCC-----
Confidence 579999999999999999999998763 112223344554211 0100000000
Q ss_pred HHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc-EEecCCCcH---HHHhcc--CEEeccC
Q 047874 630 RIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG-LSMGIQGTE---VAKESS--DIVIMDD 703 (941)
Q Consensus 630 ~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~~~---~a~~~a--d~vl~~~ 703 (941)
...-..+-.|+--..+.+.+.-..+.+++|||+.+|+.+-+.||+. |++. .+.. .....+ |+++.
T Consensus 97 ------~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ii~-- 167 (181)
T PRK08942 97 ------DGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVR-TGKGVTTLAEGAAPGTWVLD-- 167 (181)
T ss_pred ------CCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEc-CCCCchhhhcccCCCceeec--
Confidence 0000112234434455555554567899999999999999999984 3332 2221 122234 77764
Q ss_pred CchHHHHHHH
Q 047874 704 NFSSVVTVLR 713 (941)
Q Consensus 704 ~~~~i~~~i~ 713 (941)
++..+.+++.
T Consensus 168 ~l~el~~~l~ 177 (181)
T PRK08942 168 SLADLPQALK 177 (181)
T ss_pred CHHHHHHHHH
Confidence 5666665543
No 114
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=96.57 E-value=0.0044 Score=59.33 Aligned_cols=105 Identities=19% Similarity=0.205 Sum_probs=73.8
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcC----CCCCCCCCCcccceecchhcccCCHHHHHHhhcCceE
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECG----ILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRV 639 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~g----i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v 639 (941)
.++|+.++.++.+++.+++++++|+....-...+-+..+ |...+...+......+|.- .+
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h----------------~i 136 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQH----------------SI 136 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCce----------------ee
Confidence 478999999999999999999999998888888777766 3221110001111111110 01
Q ss_pred EEec-C--HHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEe
Q 047874 640 MARS-S--PLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSM 684 (941)
Q Consensus 640 ~~~~-~--p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam 684 (941)
.... + -.+|...|+.+++..+.+.++|||+.|+++-+.+|+-.|-
T Consensus 137 ~~~~ds~fG~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 137 KYTDDSQFGHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred ecCCccccCCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 1111 1 2479999999999999999999999999998888887753
No 115
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.55 E-value=0.011 Score=55.84 Aligned_cols=92 Identities=18% Similarity=0.146 Sum_probs=65.3
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCC--------HHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhc
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDN--------VHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIE 635 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~--------~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 635 (941)
++.+++.++++.|+++|+++.++|+.. ...+..+.+.+|+... .....+ .
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~-~-------------- 82 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPID-------VLYACP-H-------------- 82 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEE-------EEEECC-C--------------
Confidence 577999999999999999999999998 7778888899888521 011111 0
Q ss_pred CceEEEecCHHHHHHHHHHHH-hCCCEEEEEcC-CccCHHHHHhCCcc
Q 047874 636 SIRVMARSSPLDKLLMVQSLK-QKGHVVAVTGD-GTNDAPALRAADIG 681 (941)
Q Consensus 636 ~~~v~~~~~p~~K~~iv~~l~-~~g~~v~~iGD-g~ND~~~l~~A~vg 681 (941)
..+-.|+-=..+++.++ -..+.+++||| ..+|+.+-+.|++-
T Consensus 83 ----~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 83 ----CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred ----CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 01112333334455552 44578999999 69999999999873
No 116
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=96.53 E-value=0.013 Score=68.29 Aligned_cols=124 Identities=15% Similarity=0.108 Sum_probs=83.1
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.||+.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+.+.. ...
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~------f~~i~~~d~v~-----------------~~~ 386 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQW------VTETFSIEQIN-----------------SLN 386 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhh------cceeEecCCCC-----------------CCC
Confidence 5789999999999999999999999999999999999998642 11223222211 012
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCc-cEEecC-CCcHHHHhccCEEeccCCchHHHHHHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADI-GLSMGI-QGTEVAKESSDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~v-gIam~~-~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 714 (941)
.|+--....+.+ ..+.++++||+.+|..+-+.|++ .|++.. ...+.....+|+++. ++..+.+++..
T Consensus 387 kP~~~~~al~~l--~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~--~l~el~~~l~~ 455 (459)
T PRK06698 387 KSDLVKSILNKY--DIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVID--DLLELKGILST 455 (459)
T ss_pred CcHHHHHHHHhc--CcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeC--CHHHHHHHHHH
Confidence 233222222222 24679999999999999999998 455531 122222345888875 66777666543
No 117
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=96.46 E-value=0.01 Score=60.62 Aligned_cols=96 Identities=16% Similarity=0.247 Sum_probs=67.5
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.++++.|+++|+++.++|+-+........+.+|+... ...++.+.+.. ...-
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~------fd~i~~s~~~~----------------~~KP 149 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDP------FDAVLSADAVR----------------AYKP 149 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhh------hheeEehhhcC----------------CCCC
Confidence 4679999999999999999999999999999999999998532 11122221110 0111
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG 681 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg 681 (941)
.|+-=..+.+.+.-..+.+++|||+.+|+.+-++||+-
T Consensus 150 ~~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 150 APQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFK 187 (198)
T ss_pred CHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCc
Confidence 22222344444444457899999999999999999885
No 118
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=96.45 E-value=0.0072 Score=66.19 Aligned_cols=109 Identities=14% Similarity=-0.021 Sum_probs=76.5
Q ss_pred eccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceE
Q 047874 560 GLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRV 639 (941)
Q Consensus 560 ~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v 639 (941)
...+++.+++.++++.|++.|++++++||++...+..+.+.+|+..... ..+.|.+.. . ..+... -
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f------~~i~~~~~~----~---~~~~~~-~ 248 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWF------DDLIGRPPD----M---HFQREQ-G 248 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCch------hhhhCCcch----h---hhcccC-C
Confidence 3577899999999999999999999999999999999999998864110 011111100 0 000000 0
Q ss_pred EEecCHHHHHHHHHHHHh-CCCEEEEEcCCccCHHHHHhCCccE
Q 047874 640 MARSSPLDKLLMVQSLKQ-KGHVVAVTGDGTNDAPALRAADIGL 682 (941)
Q Consensus 640 ~~~~~p~~K~~iv~~l~~-~g~~v~~iGDg~ND~~~l~~A~vgI 682 (941)
-.+-.|+-+...++.+.. ....++|+||..+|+.+-+.|++-.
T Consensus 249 ~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 249 DKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred CCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 124456677777776544 3478999999999999999999863
No 119
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=96.44 E-value=0.0084 Score=62.48 Aligned_cols=100 Identities=12% Similarity=0.050 Sum_probs=68.1
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.+.++.|+++|+++.++|+.+...+...-+..|+... ...++.+.+... ..-
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~------fd~iv~s~~~~~----------------~KP 150 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAH------LDLLLSTHTFGY----------------PKE 150 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHH------CCEEEEeeeCCC----------------CCC
Confidence 5679999999999999999999999998888888888887531 111222111100 011
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc--EEec
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG--LSMG 685 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg--Iam~ 685 (941)
.|+-=..+.+.+.-..+.+++|||+.+|+.+-+.||+. +++.
T Consensus 151 ~p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~ 194 (224)
T PRK14988 151 DQRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVT 194 (224)
T ss_pred CHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEe
Confidence 22222333344433456799999999999999999995 4454
No 120
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=96.36 E-value=0.018 Score=56.92 Aligned_cols=112 Identities=12% Similarity=0.080 Sum_probs=72.0
Q ss_pred EEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCC-CHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHH
Q 047874 554 TLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGD-NVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIA 632 (941)
Q Consensus 554 ~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd-~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 632 (941)
.......-+-++.+++.+.++.|+++|+++.++|+. ....+..+.+.+|+........ +..
T Consensus 35 ~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~------------------~~~ 96 (174)
T TIGR01685 35 IIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVP------------------MHS 96 (174)
T ss_pred eEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCccc------------------HHH
Confidence 344445555677899999999999999999999987 8888999999999852110000 000
Q ss_pred hhcCceEEEecCHHHH--HHHHHHHHhC------CCEEEEEcCCccCHHHHHhCCccEEe
Q 047874 633 KIESIRVMARSSPLDK--LLMVQSLKQK------GHVVAVTGDGTNDAPALRAADIGLSM 684 (941)
Q Consensus 633 ~~~~~~v~~~~~p~~K--~~iv~~l~~~------g~~v~~iGDg~ND~~~l~~A~vgIam 684 (941)
.+ ...+.++..+..| ..+.+.+.+. .+.+++|||+..|+.+-++|++-...
T Consensus 97 ~F-d~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 97 LF-DDRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred hc-eeeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 00 0011111111112 2334444432 46899999999999999999986543
No 121
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=96.36 E-value=0.016 Score=71.54 Aligned_cols=38 Identities=11% Similarity=-0.008 Sum_probs=32.6
Q ss_pred CCCCcchHHHHHHH-HhcCCeEEEEcCCCHHHHHHHHHH
Q 047874 563 DPCRPGVRAAVESC-RNAGVNVKMVTGDNVHTARAIAIE 600 (941)
Q Consensus 563 d~~~~~~~~~I~~l-~~aGi~v~i~TGd~~~~a~~ia~~ 600 (941)
-.+.+++.+++++| ++.|+.|+++|||...+.......
T Consensus 615 ~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 615 KSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred CCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 35678999999997 778999999999999998887754
No 122
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=96.33 E-value=0.0099 Score=61.82 Aligned_cols=100 Identities=17% Similarity=0.193 Sum_probs=69.0
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.|++.++++.|+++|++++++|+-+...+....+.+|+... ...++.+.+.. ..+-
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~------f~~i~~~~~~~----------------~~KP 151 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDF------FDAVITSEEEG----------------VEKP 151 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHh------ccEEEEeccCC----------------CCCC
Confidence 4689999999999999999999999998888888899998642 11122222110 0112
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCc-cCHHHHHhCCc-cEEec
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGT-NDAPALRAADI-GLSMG 685 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~-ND~~~l~~A~v-gIam~ 685 (941)
.|+-=..+.+.+.-..+.+++|||.. +|+.+-++||+ +|.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 152 HPKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred CHHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 23322333444433456899999998 99999999998 45554
No 123
>PRK06769 hypothetical protein; Validated
Probab=96.28 E-value=0.015 Score=57.89 Aligned_cols=100 Identities=13% Similarity=-0.016 Sum_probs=60.9
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHH--------HHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcC
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVH--------TARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIES 636 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~--------~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 636 (941)
+-|++.+++++|++.|+++.++|+.... ......+..|+..-.. .....+.+.
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~-----~~~~~~~~~-------------- 89 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYL-----CPHKHGDGC-------------- 89 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEE-----CcCCCCCCC--------------
Confidence 5799999999999999999999987631 2233344555542000 000000000
Q ss_pred ceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc-EEec
Q 047874 637 IRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG-LSMG 685 (941)
Q Consensus 637 ~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~ 685 (941)
-..+-.|+-=..+++.+.-..+.+++|||+.+|..+-++|++- |++.
T Consensus 90 --~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~ 137 (173)
T PRK06769 90 --ECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVR 137 (173)
T ss_pred --CCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEe
Confidence 0112233333445555544456899999999999999999985 4443
No 124
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=96.24 E-value=0.041 Score=54.51 Aligned_cols=38 Identities=13% Similarity=0.170 Sum_probs=35.1
Q ss_pred chHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 047874 568 GVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILN 605 (941)
Q Consensus 568 ~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~ 605 (941)
.+...+.+|+++|++|+.+|.........+-+++|+..
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~ 64 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQG 64 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCCC
Confidence 47789999999999999999999999999999999973
No 125
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=96.21 E-value=0.0088 Score=60.21 Aligned_cols=94 Identities=13% Similarity=0.249 Sum_probs=61.8
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.|++.++++.|+++|+++.++|+... +....+.+|+... ...++.+.+.. ..+-
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~------f~~~~~~~~~~----------------~~kp 142 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDY------FDAIVDPAEIK----------------KGKP 142 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhh------CcEEEehhhcC----------------CCCC
Confidence 5679999999999999999999997543 4567788887532 11222222110 1112
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG 681 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg 681 (941)
.|+-=....+.+.-..+.+++|||+.+|+.+-+.||+-
T Consensus 143 ~p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 143 DPEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred ChHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 23322333333333345799999999999999999884
No 126
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=96.16 E-value=0.016 Score=58.00 Aligned_cols=94 Identities=21% Similarity=0.240 Sum_probs=64.3
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.|++.+.++.|+++|++++++|+..... ..+..++|+... ...++.+.+.. ...-
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~------f~~i~~~~~~~----------------~~KP 141 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDL------FDVVIFSGDVG----------------RGKP 141 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHH------CCEEEEcCCCC----------------CCCC
Confidence 567999999999999999999999988887 666666887531 11222221110 1112
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCc
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADI 680 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~v 680 (941)
+|+--..+.+.+.-....++++||...|+.+-++||+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 142 DPDIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred CHHHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 2333344445554456789999999999999999887
No 127
>PRK09449 dUMP phosphatase; Provisional
Probab=96.09 E-value=0.024 Score=59.02 Aligned_cols=124 Identities=15% Similarity=0.135 Sum_probs=76.7
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.++++.|+ +|+++.++|+.....+...-+.+|+... ...++.+.+.. ...-
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~------fd~v~~~~~~~----------------~~KP 151 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDY------FDLLVISEQVG----------------VAKP 151 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHH------cCEEEEECccC----------------CCCC
Confidence 36799999999999 6899999999998888888888888531 11122111110 0111
Q ss_pred CHHHHHHHHHHHHhC-CCEEEEEcCCc-cCHHHHHhCCcc-EEecCCCcH-HHHhccCEEeccCCchHHHHHH
Q 047874 644 SPLDKLLMVQSLKQK-GHVVAVTGDGT-NDAPALRAADIG-LSMGIQGTE-VAKESSDIVIMDDNFSSVVTVL 712 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~-g~~v~~iGDg~-ND~~~l~~A~vg-Iam~~~~~~-~a~~~ad~vl~~~~~~~i~~~i 712 (941)
+|+-=..+++.+.-. .+.+++|||+. +|+.+-+.||+- |.+...+.. .....+|+++. ++..+.+++
T Consensus 152 ~p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~--~~~el~~~l 222 (224)
T PRK09449 152 DVAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVS--SLSELEQLL 222 (224)
T ss_pred CHHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEEC--CHHHHHHHH
Confidence 222223333444322 35799999998 799999999985 444311211 11124677775 566666544
No 128
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=95.96 E-value=0.013 Score=58.92 Aligned_cols=94 Identities=19% Similarity=0.267 Sum_probs=61.9
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.|++.++++.|+++|+++.++|+. ..+..+.+.+|+..- ...++.+.... ..+-
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~------f~~v~~~~~~~----------------~~kp 143 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDY------FDAIVDADEVK----------------EGKP 143 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHH------CCEeeehhhCC----------------CCCC
Confidence 57899999999999999999999997 567778888888531 01111111100 0111
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG 681 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg 681 (941)
.|+-=....+.+.-..+.+++|||+.+|+.+-+.||+.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 144 HPETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred ChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 12211223333333346799999999999999999874
No 129
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=95.90 E-value=0.033 Score=60.36 Aligned_cols=118 Identities=19% Similarity=0.160 Sum_probs=74.3
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.|++.+.++.|++.|+++.++|+.+......+-+..+...-. ..-.++.+.+.. ..+-
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~----~~~~~v~~~~~~----------------~~KP 203 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERA----QGLDVFAGDDVP----------------KKKP 203 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcccccc----CceEEEeccccC----------------CCCC
Confidence 46799999999999999999999999888887776665322100 000111221110 1122
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCc--HHHHhccCEEec
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGT--EVAKESSDIVIM 701 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~--~~a~~~ad~vl~ 701 (941)
.|+-=..+.+.+.-..+.+++|||+.+|+.+-+.||+.......+. ......+|+++.
T Consensus 204 ~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~ 263 (286)
T PLN02779 204 DPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFD 263 (286)
T ss_pred CHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEEC
Confidence 3333344555555456789999999999999999998644321222 111245788875
No 130
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=95.86 E-value=0.011 Score=58.51 Aligned_cols=96 Identities=19% Similarity=0.254 Sum_probs=69.4
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.+.++.|+++|++++++|+.+........+.+|+... ...++.+.+... .+-
T Consensus 77 ~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~------f~~i~~~~~~~~----------------~Kp 134 (176)
T PF13419_consen 77 QPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDY------FDEIISSDDVGS----------------RKP 134 (176)
T ss_dssp EESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGG------CSEEEEGGGSSS----------------STT
T ss_pred chhhhhhhhhhhcccccceeEEeecCCcccccccccccccccc------cccccccchhhh----------------hhh
Confidence 4679999999999999999999999999999999999998731 112222221110 011
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG 681 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg 681 (941)
.|+-=..+++.+.-..+.+++|||+..|+.+-+.||+-
T Consensus 135 ~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 135 DPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp SHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 22333445555554567899999999999999999874
No 131
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=95.85 E-value=0.035 Score=55.39 Aligned_cols=122 Identities=20% Similarity=0.116 Sum_probs=65.0
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHH---------------HHHHHHHHcCCCCCCCCCCcccceecc-hhcccCCHH
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVH---------------TARAIAIECGILNPDVDLNKDEAVIEG-VQFRSLSAE 628 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~---------------~a~~ia~~~gi~~~~~~~~~~~~~~~g-~~~~~~~~~ 628 (941)
+.|++.++|+.|+++|+++.++|.-+.. ....+..+.|+....... ......| ..+..
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~--~~~~~~~~~~~~~---- 100 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLDGIYY--CPHHPEGVEEFRQ---- 100 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCccEEEE--CCCCCcccccccC----
Confidence 5689999999999999999999987631 112333344443110000 0000000 00000
Q ss_pred HHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc--EEecCCCcH---HHHhccCEEec
Q 047874 629 ERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG--LSMGIQGTE---VAKESSDIVIM 701 (941)
Q Consensus 629 ~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg--Iam~~~~~~---~a~~~ad~vl~ 701 (941)
. .-..+-.|+-=....+.+.-..+.++||||..+|+.+-++|++. |.+. .+.. .....+|+++.
T Consensus 101 -------~-~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~-~g~~~~~~~~~~ad~~i~ 169 (176)
T TIGR00213 101 -------V-CDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVR-TGKPITPEAENIADWVLN 169 (176)
T ss_pred -------C-CCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEe-cCCcccccccccCCEEec
Confidence 0 00011122222333333333457899999999999999999985 3443 2321 12234788875
No 132
>PLN02940 riboflavin kinase
Probab=95.84 E-value=0.029 Score=63.41 Aligned_cols=115 Identities=17% Similarity=0.152 Sum_probs=74.2
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHH-HcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEe
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAI-ECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMAR 642 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~-~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 642 (941)
++.+++.+.++.|++.|+++.++|+.....+....+ ..|+... .+.++.+.+.. ...
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~------Fd~ii~~d~v~----------------~~K 150 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKES------FSVIVGGDEVE----------------KGK 150 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhh------CCEEEehhhcC----------------CCC
Confidence 357999999999999999999999999888877665 5777431 11222222110 111
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc-EEecCCCc--HHHHhccCEEec
Q 047874 643 SSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG-LSMGIQGT--EVAKESSDIVIM 701 (941)
Q Consensus 643 ~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~~--~~a~~~ad~vl~ 701 (941)
-.|+-=..+++.+.-..+.+++|||+.+|+.+-+.||+. |++. .+. ......+|.++.
T Consensus 151 P~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~-~g~~~~~~~~~ad~~i~ 211 (382)
T PLN02940 151 PSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVP-SIPKQTHLYSSADEVIN 211 (382)
T ss_pred CCHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEEC-CCCcchhhccCccEEeC
Confidence 223333444444444467899999999999999999986 4444 222 222234566554
No 133
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=95.76 E-value=0.046 Score=57.89 Aligned_cols=87 Identities=14% Similarity=0.138 Sum_probs=60.3
Q ss_pred cCCCCcchHHHHHHHHhcCCeEEEEcCCCHH---HHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCce
Q 047874 562 KDPCRPGVRAAVESCRNAGVNVKMVTGDNVH---TARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIR 638 (941)
Q Consensus 562 ~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~---~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 638 (941)
..++-|++.+.++.+++.|+++.++|++... .+....++.|+..... + .
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~----d------------------------~ 167 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADE----E------------------------H 167 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCc----c------------------------e
Confidence 3456799999999999999999999998844 3446667788864210 0 1
Q ss_pred EEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHH
Q 047874 639 VMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALR 676 (941)
Q Consensus 639 v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~ 676 (941)
++.|-....|..-.+.+.+.-..++++||..+|.....
T Consensus 168 lllr~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 168 LLLKKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred EEeCCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhhh
Confidence 33333333455555566555567999999999986543
No 134
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=95.76 E-value=0.026 Score=54.47 Aligned_cols=99 Identities=21% Similarity=0.203 Sum_probs=60.6
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCH---------------HHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHH
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNV---------------HTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAE 628 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~ 628 (941)
++.+++.++++.|+++|+++.++|+.+. ..+..+.+.+|+.... ..........
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~---- 95 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDG-------VLFCPHHPAD---- 95 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeE-------EEECCCCCCC----
Confidence 3679999999999999999999998763 4556677788875210 0000000000
Q ss_pred HHHHhhcCceE-EEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccE
Q 047874 629 ERIAKIESIRV-MARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGL 682 (941)
Q Consensus 629 ~~~~~~~~~~v-~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgI 682 (941)
.. ...-.|+-=..+++.+.-..+.+++|||...|+.+-+.|++-.
T Consensus 96 ---------~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~ 141 (147)
T TIGR01656 96 ---------NCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAA 141 (147)
T ss_pred ---------CCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCE
Confidence 00 0011122222333333333467999999999999999998853
No 135
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=95.73 E-value=0.029 Score=58.37 Aligned_cols=121 Identities=12% Similarity=0.071 Sum_probs=75.8
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.+.++.|++. +++.++|+-....+..+.+++|+...- +.++.+.+.. ..+-
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f------d~i~~~~~~~----------------~~KP 153 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF------DDIFVSEDAG----------------IQKP 153 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc------CEEEEcCccC----------------CCCC
Confidence 4679999999999999 999999999999999999999986421 1121111100 0112
Q ss_pred CHHHHHHHHHHH-HhCCCEEEEEcCCc-cCHHHHHhCCcc-EEecC-CCcHHHHhccCEEeccCCchHHH
Q 047874 644 SPLDKLLMVQSL-KQKGHVVAVTGDGT-NDAPALRAADIG-LSMGI-QGTEVAKESSDIVIMDDNFSSVV 709 (941)
Q Consensus 644 ~p~~K~~iv~~l-~~~g~~v~~iGDg~-ND~~~l~~A~vg-Iam~~-~~~~~a~~~ad~vl~~~~~~~i~ 709 (941)
.|+-=...++.+ .-..+.+++|||+. +|..+-+.+|+- |.+.. ...+.....+|+++. ++..+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~--~~~el~ 221 (224)
T TIGR02254 154 DKEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIR--SLEELY 221 (224)
T ss_pred CHHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEEC--CHHHHH
Confidence 222223444444 33346799999998 899999999973 44431 111122234566654 444444
No 136
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=95.69 E-value=0.047 Score=56.13 Aligned_cols=86 Identities=16% Similarity=0.173 Sum_probs=57.1
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEcCCCHHH---HHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceE
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVTGDNVHT---ARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRV 639 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~---a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v 639 (941)
-+.-+++.++++.+++.|++|+++|||.... +..--++.|+..- ..+++.+..-
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~------~~LiLR~~~d----------------- 175 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW------KHLILRGLED----------------- 175 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc------CeeeecCCCC-----------------
Confidence 3677999999999999999999999999766 4444556777641 1122211100
Q ss_pred EEecC-HHHHHHHHHHHHhCCCE-EEEEcCCccCH
Q 047874 640 MARSS-PLDKLLMVQSLKQKGHV-VAVTGDGTNDA 672 (941)
Q Consensus 640 ~~~~~-p~~K~~iv~~l~~~g~~-v~~iGDg~ND~ 672 (941)
.+.+ .+-|.+.-+.+.+.|++ ++.+||-.+|.
T Consensus 176 -~~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 176 -SNKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDL 209 (229)
T ss_pred -CCchHhHHHHHHHHHHHhCCceEEEEECCChHHh
Confidence 0001 12277777777777764 56699999986
No 137
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=95.67 E-value=0.033 Score=55.27 Aligned_cols=90 Identities=18% Similarity=0.164 Sum_probs=63.0
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCC-HHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEe
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDN-VHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMAR 642 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~-~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 642 (941)
.+-+++.++++.|++.|++++++|+.+ ...+..+.+.+|+... .+ ...
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~-----------~~--------------------~~K 91 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVL-----------PH--------------------AVK 91 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEE-----------cC--------------------CCC
Confidence 567999999999999999999999988 6777788888876420 00 011
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEEcCCc-cCHHHHHhCCcc-EEe
Q 047874 643 SSPLDKLLMVQSLKQKGHVVAVTGDGT-NDAPALRAADIG-LSM 684 (941)
Q Consensus 643 ~~p~~K~~iv~~l~~~g~~v~~iGDg~-ND~~~l~~A~vg-Iam 684 (941)
-.|+-=..+.+.+.-..+.+++|||.. .|..+-+.||+- |.+
T Consensus 92 P~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v 135 (170)
T TIGR01668 92 PPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILV 135 (170)
T ss_pred CChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEE
Confidence 122222233333333356799999998 799999999983 444
No 138
>PLN02423 phosphomannomutase
Probab=95.66 E-value=0.065 Score=56.62 Aligned_cols=39 Identities=28% Similarity=0.366 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHhCCCEEEEEcC----CccCHHHHHh-CCccEEec
Q 047874 646 LDKLLMVQSLKQKGHVVAVTGD----GTNDAPALRA-ADIGLSMG 685 (941)
Q Consensus 646 ~~K~~iv~~l~~~g~~v~~iGD----g~ND~~~l~~-A~vgIam~ 685 (941)
.+|+..++.++ ..+.|+++|| |.||.+||+. --.|+++.
T Consensus 188 vnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 188 WDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVT 231 (245)
T ss_pred CCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeC
Confidence 48999999999 7889999999 8999999997 55688886
No 139
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=95.59 E-value=0.026 Score=55.32 Aligned_cols=96 Identities=18% Similarity=0.079 Sum_probs=59.7
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCC---------------HHHHHHHHHHcCCCCCCCCCCcccceec----chhccc
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDN---------------VHTARAIAIECGILNPDVDLNKDEAVIE----GVQFRS 624 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~---------------~~~a~~ia~~~gi~~~~~~~~~~~~~~~----g~~~~~ 624 (941)
++-+++.++++.|+++|+++.++|.-. ...+..+.+.+|+.-. ..++. ..+..
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd-------~ii~~~~~~~~~~~- 100 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFD-------DVLICPHFPDDNCD- 100 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCcee-------EEEECCCCCCCCCC-
Confidence 356899999999999999999999852 3456667777787521 01110 00000
Q ss_pred CCHHHHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccE
Q 047874 625 LSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGL 682 (941)
Q Consensus 625 ~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgI 682 (941)
+..-.|+-=..+++.+.-..+.+++|||+.+|..+-++|++-.
T Consensus 101 ---------------~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~ 143 (161)
T TIGR01261 101 ---------------CRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRG 143 (161)
T ss_pred ---------------CCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeE
Confidence 0001111112222332223457999999999999999999854
No 140
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=95.57 E-value=0.016 Score=59.93 Aligned_cols=106 Identities=21% Similarity=0.281 Sum_probs=68.0
Q ss_pred CCCcchHHHHHHH--HhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEE
Q 047874 564 PCRPGVRAAVESC--RNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMA 641 (941)
Q Consensus 564 ~~~~~~~~~I~~l--~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~ 641 (941)
|+.|+.+++++.+ ++.|+.+.++|.-+..-...+-+.-|+... ...+.+....-+-... +.-..-...-+.
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~------f~~I~TNpa~~~~~G~-l~v~pyh~h~C~ 143 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDC------FSEIFTNPACFDADGR-LRVRPYHSHGCS 143 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccc------cceEEeCCceecCCce-EEEeCccCCCCC
Confidence 5678999999999 568999999999999999999999998642 1122222111000000 000000001133
Q ss_pred ecCH-HHHHHHHHHHHhC----C---CEEEEEcCCccCH-HHHH
Q 047874 642 RSSP-LDKLLMVQSLKQK----G---HVVAVTGDGTNDA-PALR 676 (941)
Q Consensus 642 ~~~p-~~K~~iv~~l~~~----g---~~v~~iGDg~ND~-~~l~ 676 (941)
++.| .=|..+++.+.+. | ..|++||||.||. |+++
T Consensus 144 ~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~ 187 (234)
T PF06888_consen 144 LCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALR 187 (234)
T ss_pred cCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccc
Confidence 4443 4689988888765 4 6999999999995 5543
No 141
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=95.40 E-value=0.15 Score=54.26 Aligned_cols=49 Identities=27% Similarity=0.343 Sum_probs=38.7
Q ss_pred EEEeccCC----CCcchHHHHHHHHhcCCeEEEEcCCCHHH---HHHHHHHcCCCC
Q 047874 557 GLVGLKDP----CRPGVRAAVESCRNAGVNVKMVTGDNVHT---ARAIAIECGILN 605 (941)
Q Consensus 557 G~i~~~d~----~~~~~~~~I~~l~~aGi~v~i~TGd~~~~---a~~ia~~~gi~~ 605 (941)
|.+.-.+. +-|++.++|++|+++|++++++||++..+ .....+++|+..
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~ 65 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDI 65 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 55555566 88999999999999999999999977665 455556678753
No 142
>PLN03017 trehalose-phosphatase
Probab=95.33 E-value=0.2 Score=55.22 Aligned_cols=46 Identities=20% Similarity=0.148 Sum_probs=36.2
Q ss_pred CcEEEEEEeccC--CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHH
Q 047874 552 GLTLLGLVGLKD--PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIA 598 (941)
Q Consensus 552 ~l~~lG~i~~~d--~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia 598 (941)
|.|++-++.-.| .+.+++.++|++|. .|++++++|||.......+.
T Consensus 119 DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 119 DGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred CCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 445554444333 47899999999999 78999999999999998874
No 143
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=95.30 E-value=0.051 Score=51.79 Aligned_cols=110 Identities=16% Similarity=0.232 Sum_probs=76.8
Q ss_pred HHHHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHH
Q 047874 519 IQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIA 598 (941)
Q Consensus 519 ~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia 598 (941)
.+.+..+|++.+.+-.. -|++..= ..+..|++++=+++++++|+++.++|..+...+...+
T Consensus 20 ~~~L~~~Gikgvi~DlD-----------------NTLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~ 80 (175)
T COG2179 20 PDILKAHGIKGVILDLD-----------------NTLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAA 80 (175)
T ss_pred HHHHHHcCCcEEEEecc-----------------Cceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhh
Confidence 35677889988876431 1222211 2345788999999999999999999999999999999
Q ss_pred HHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHH--HHHHHHHHhCCCEEEEEcCCc-cCHHHH
Q 047874 599 IECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDK--LLMVQSLKQKGHVVAVTGDGT-NDAPAL 675 (941)
Q Consensus 599 ~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K--~~iv~~l~~~g~~v~~iGDg~-ND~~~l 675 (941)
+.+|++. ++--..|-.+ .+.++.++-..+.|+||||.. .|+-+=
T Consensus 81 ~~l~v~f---------------------------------i~~A~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlgg 127 (175)
T COG2179 81 EKLGVPF---------------------------------IYRAKKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGG 127 (175)
T ss_pred hhcCCce---------------------------------eecccCccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcc
Confidence 9999975 3333344433 234444444577999999974 477665
Q ss_pred HhCCc
Q 047874 676 RAADI 680 (941)
Q Consensus 676 ~~A~v 680 (941)
+.||+
T Consensus 128 nr~G~ 132 (175)
T COG2179 128 NRAGM 132 (175)
T ss_pred cccCc
Confidence 55555
No 144
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=95.19 E-value=0.05 Score=55.70 Aligned_cols=95 Identities=16% Similarity=0.161 Sum_probs=61.0
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++-|++.++++.|+++|+++.++|+-... .....+.+|+... ...++.+.+.. ..+-
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~------fd~i~~s~~~~----------------~~KP 161 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEY------FDFVVTSYEVG----------------AEKP 161 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHh------cceEEeecccC----------------CCCC
Confidence 46799999999999999999999986654 4677788887431 01111111100 0111
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCc-cCHHHHHhCCcc
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGT-NDAPALRAADIG 681 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~-ND~~~l~~A~vg 681 (941)
+|+-=..+++.+.-....+++|||+. +|+.+-++||+-
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 162 DPKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred CHHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 22222333344433457899999997 899999988764
No 145
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=95.18 E-value=0.051 Score=52.82 Aligned_cols=90 Identities=17% Similarity=0.220 Sum_probs=58.4
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecC
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSS 644 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 644 (941)
..+++.+.++.|++.|+++.++|+.....+....+.. +.... ..++.... +..+-.
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f------~~i~~~~~-----------------~~~Kp~ 120 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYF------DLILGSDE-----------------FGAKPE 120 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcC------cEEEecCC-----------------CCCCcC
Confidence 3478999999999999999999999999988888775 33210 11111100 111122
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCC
Q 047874 645 PLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAAD 679 (941)
Q Consensus 645 p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~ 679 (941)
|+-=..+.+.+.-.. .+++|||+.+|..+-+.|+
T Consensus 121 ~~~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 121 PEIFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 222233333333334 7999999999999888775
No 146
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=95.11 E-value=0.19 Score=53.05 Aligned_cols=94 Identities=16% Similarity=0.182 Sum_probs=61.5
Q ss_pred EEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHH--HHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhh
Q 047874 557 GLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTAR--AIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKI 634 (941)
Q Consensus 557 G~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~--~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 634 (941)
|.+.-.+.+-|++.+++++|+++|+++.++|......+. ...+++|+..+. ...
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~-----~~~------------------- 72 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADL-----PEM------------------- 72 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccc-----cce-------------------
Confidence 556667788999999999999999999999996655444 566888886411 011
Q ss_pred cCceEEEecCHHHHHHHHHHHHh---CCCEEEEEcCCccCHHHHHhCC
Q 047874 635 ESIRVMARSSPLDKLLMVQSLKQ---KGHVVAVTGDGTNDAPALRAAD 679 (941)
Q Consensus 635 ~~~~v~~~~~p~~K~~iv~~l~~---~g~~v~~iGDg~ND~~~l~~A~ 679 (941)
+++.. ......+.+.+++ .+..+.++||+.+|...+..++
T Consensus 73 ----Ii~s~-~~~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 73 ----IISSG-EIAVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred ----EEccH-HHHHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 12111 1111222222232 2467999999999998886443
No 147
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=94.85 E-value=0.078 Score=54.74 Aligned_cols=98 Identities=14% Similarity=0.156 Sum_probs=67.0
Q ss_pred cCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcC---CCCCCCCCCcccceecchhcccCCHHHHHHhhcCce
Q 047874 562 KDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECG---ILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIR 638 (941)
Q Consensus 562 ~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~g---i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 638 (941)
+-++.+++.+++++|+++|+++.++|..+....+.+.+..+ +..- +++ .+ ...
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~----------f~~-------------~f-d~~ 148 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY----------FSG-------------YF-DTT 148 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh----------cce-------------EE-EeC
Confidence 34688999999999999999999999998887777666542 2110 000 00 001
Q ss_pred EEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEE
Q 047874 639 VMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLS 683 (941)
Q Consensus 639 v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIa 683 (941)
+...-.|+-=..+.+.+.-..+.++++||...|+.+-++||+-..
T Consensus 149 ~g~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 149 VGLKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTG 193 (220)
T ss_pred cccCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 122234444455555555456789999999999999999999543
No 148
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=94.82 E-value=0.025 Score=54.62 Aligned_cols=95 Identities=12% Similarity=-0.053 Sum_probs=64.8
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
+++|++.+.++.|+ .++++.++|+-+...+..+.+.+|+...- ...++.+.+.. +.
T Consensus 45 ~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~-----f~~i~~~~d~~------------------~~ 100 (148)
T smart00577 45 KKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYF-----GYRRLFRDECV------------------FV 100 (148)
T ss_pred EECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCE-----eeeEEECcccc------------------cc
Confidence 46999999999999 57999999999999999999999874310 01222222211 11
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEE
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLS 683 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIa 683 (941)
.|. =.+.++.+....+.+++|||..+|..+-+.|++-|.
T Consensus 101 KP~-~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 101 KGK-YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred CCe-EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 121 111233333446789999999999998877766553
No 149
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=94.78 E-value=0.077 Score=49.82 Aligned_cols=39 Identities=10% Similarity=0.152 Sum_probs=34.9
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCC-CHHHHHHHHHHcC
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGD-NVHTARAIAIECG 602 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd-~~~~a~~ia~~~g 602 (941)
++.+++.+.++.|+++|+++.++|+. ....+..+.+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68899999999999999999999999 7777777777776
No 150
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=94.46 E-value=0.059 Score=56.97 Aligned_cols=68 Identities=21% Similarity=0.236 Sum_probs=50.2
Q ss_pred EEecCHHHHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhC--------CccEEecCCCcHHHHhccCEEeccCCchH
Q 047874 640 MARSSPLDKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAA--------DIGLSMGIQGTEVAKESSDIVIMDDNFSS 707 (941)
Q Consensus 640 ~~~~~p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A--------~vgIam~~~~~~~a~~~ad~vl~~~~~~~ 707 (941)
-.+..+.+|...++.+.+. ...++++||+.||.+|++.+ +.||+|+ .+ ..+..|++++. +...
T Consensus 160 e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g--~~~~~A~~~~~--~~~~ 234 (244)
T TIGR00685 160 ELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SG--SKKTVAKFHLT--GPQQ 234 (244)
T ss_pred EEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cC--CcCCCceEeCC--CHHH
Confidence 3344567899888887654 35799999999999999999 5788885 23 23566899887 5566
Q ss_pred HHHHH
Q 047874 708 VVTVL 712 (941)
Q Consensus 708 i~~~i 712 (941)
+.+.+
T Consensus 235 v~~~L 239 (244)
T TIGR00685 235 VLEFL 239 (244)
T ss_pred HHHHH
Confidence 66555
No 151
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=94.31 E-value=0.13 Score=56.84 Aligned_cols=98 Identities=20% Similarity=0.081 Sum_probs=58.6
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCC---------------CHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHH
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGD---------------NVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAE 628 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd---------------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~ 628 (941)
++.|++.++++.|+++|+++.++|+- ....+..+.+..|+... ...+......+
T Consensus 30 ~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd-------~i~i~~~~~sd---- 98 (354)
T PRK05446 30 AFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFD-------EVLICPHFPED---- 98 (354)
T ss_pred eECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCcee-------eEEEeCCcCcc----
Confidence 56899999999999999999999983 23345566777776421 01110000000
Q ss_pred HHHHhhcCceEEEe-cCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc
Q 047874 629 ERIAKIESIRVMAR-SSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG 681 (941)
Q Consensus 629 ~~~~~~~~~~v~~~-~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg 681 (941)
...++ ..|+-=..+.+.+.-....+.||||+.+|..+-+.|++-
T Consensus 99 ---------~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~ 143 (354)
T PRK05446 99 ---------NCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIK 143 (354)
T ss_pred ---------cCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCe
Confidence 00011 111111122222222347899999999999999999985
No 152
>PLN02811 hydrolase
Probab=94.25 E-value=0.11 Score=53.97 Aligned_cols=96 Identities=16% Similarity=0.205 Sum_probs=59.0
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHH-HHHHcCCCCCCCCCCcccceecch--hcccCCHHHHHHhhcCceEE
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARA-IAIECGILNPDVDLNKDEAVIEGV--QFRSLSAEERIAKIESIRVM 640 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~-ia~~~gi~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~v~ 640 (941)
++.|++.+.|+.|+++|+++.++||-....... ..+..++... ...++.+. +.. .
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~------f~~i~~~~~~~~~----------------~ 135 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSL------MHHVVTGDDPEVK----------------Q 135 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhh------CCEEEECChhhcc----------------C
Confidence 467999999999999999999999987654432 2222233210 01112111 100 0
Q ss_pred EecCHHHHHHHHHHHH---hCCCEEEEEcCCccCHHHHHhCCcc
Q 047874 641 ARSSPLDKLLMVQSLK---QKGHVVAVTGDGTNDAPALRAADIG 681 (941)
Q Consensus 641 ~~~~p~~K~~iv~~l~---~~g~~v~~iGDg~ND~~~l~~A~vg 681 (941)
..-.|+-=...++.+. -..+.+++|||+..|+.+-++||+-
T Consensus 136 ~KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~ 179 (220)
T PLN02811 136 GKPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMS 179 (220)
T ss_pred CCCCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCe
Confidence 1112333334444443 2346899999999999999999985
No 153
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=94.15 E-value=0.15 Score=50.32 Aligned_cols=93 Identities=10% Similarity=0.048 Sum_probs=57.8
Q ss_pred CcchHHHHHHHHhcCCeEEEEcCCCHH------------HHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHh
Q 047874 566 RPGVRAAVESCRNAGVNVKMVTGDNVH------------TARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAK 633 (941)
Q Consensus 566 ~~~~~~~I~~l~~aGi~v~i~TGd~~~------------~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 633 (941)
-+++.++++.|+++|+++.++|..+.. .+..+.+.+|+.. ..++.+...
T Consensus 44 ~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--------~~ii~~~~~----------- 104 (166)
T TIGR01664 44 YPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--------QVLAATHAG----------- 104 (166)
T ss_pred cCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--------EEEEecCCC-----------
Confidence 489999999999999999999976542 4566778888742 111111100
Q ss_pred hcCceEEEecCHHHHHHHHHHHH--hCCCEEEEEcCCc--------cCHHHHHhCCccE
Q 047874 634 IESIRVMARSSPLDKLLMVQSLK--QKGHVVAVTGDGT--------NDAPALRAADIGL 682 (941)
Q Consensus 634 ~~~~~v~~~~~p~~K~~iv~~l~--~~g~~v~~iGDg~--------ND~~~l~~A~vgI 682 (941)
....-.|+-=..+.+.+. -..+.++||||.. +|..+-++||+-.
T Consensus 105 -----~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 105 -----LYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred -----CCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 000111222223333333 2236799999986 6999988887653
No 154
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=94.00 E-value=0.22 Score=63.76 Aligned_cols=132 Identities=17% Similarity=0.194 Sum_probs=86.4
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecC
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSS 644 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 644 (941)
+-+++.+.++.|+++|+++.++|+.....+....++.|+.... ...++.+.+.. ...-.
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~-----Fd~iv~~~~~~----------------~~KP~ 220 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSM-----FDAIVSADAFE----------------NLKPA 220 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhH-----CCEEEECcccc----------------cCCCC
Confidence 5689999999999999999999999999999999999985210 11222222111 01122
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCc-cEEecCC--CcHHHHhccCEEeccCCchHHHHHHHHHHH
Q 047874 645 PLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADI-GLSMGIQ--GTEVAKESSDIVIMDDNFSSVVTVLRWGRC 717 (941)
Q Consensus 645 p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~v-gIam~~~--~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~ 717 (941)
|+-=....+.+.-..+.+++|||..+|+.+-+.|++ .|++... ..+.....+|+++.+-..-.+..++..|-.
T Consensus 221 Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~~~~~~ 296 (1057)
T PLN02919 221 PDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDILTGGSD 296 (1057)
T ss_pred HHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHHhcCCC
Confidence 333334455555456789999999999999999998 4555421 122334567888875544445555544433
No 155
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=94.00 E-value=0.11 Score=46.32 Aligned_cols=49 Identities=22% Similarity=0.297 Sum_probs=36.4
Q ss_pred EEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHH---HHcCCCC
Q 047874 557 GLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIA---IECGILN 605 (941)
Q Consensus 557 G~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia---~~~gi~~ 605 (941)
|++...+++=|++.++|+.|+++|++++++|..+..+...++ +++|+..
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~ 58 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPV 58 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT-
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCC
Confidence 455567788899999999999999999999998766655554 5667764
No 156
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=93.89 E-value=0.31 Score=46.84 Aligned_cols=102 Identities=18% Similarity=0.241 Sum_probs=70.1
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHH---HHHHc-----CCCCCCCCCCcccceecchh-cccCCHHHHHHh
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARA---IAIEC-----GILNPDVDLNKDEAVIEGVQ-FRSLSAEERIAK 633 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~---ia~~~-----gi~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~ 633 (941)
|..++++.+..+++++.|.+++.+|+|+...+.. ..++. +++. .....+... +..+..|
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~-------Gpv~~sP~~l~~al~rE----- 93 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPD-------GPVLLSPDSLFSALHRE----- 93 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCC-------CCEEECCcchhhhhhcc-----
Confidence 6889999999999999999999999999765543 33333 3332 222222111 1111111
Q ss_pred hcCceEEEecCHHHHHHHHHHHHhC-----CCEEEEEcCCccCHHHHHhCCcc
Q 047874 634 IESIRVMARSSPLDKLLMVQSLKQK-----GHVVAVTGDGTNDAPALRAADIG 681 (941)
Q Consensus 634 ~~~~~v~~~~~p~~K~~iv~~l~~~-----g~~v~~iGDg~ND~~~l~~A~vg 681 (941)
+..+-..+.|...++.++.. ....++.|+..+|+.+.++++|-
T Consensus 94 -----vi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 94 -----VISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred -----ccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 44555557899999999864 45778899999999999988764
No 157
>PRK10444 UMP phosphatase; Provisional
Probab=93.60 E-value=0.4 Score=50.68 Aligned_cols=48 Identities=17% Similarity=0.277 Sum_probs=41.8
Q ss_pred EEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHc---CCC
Q 047874 557 GLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIEC---GIL 604 (941)
Q Consensus 557 G~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~---gi~ 604 (941)
|++.-.+.+-|++.++++.|+++|++++++|++...+...+++++ |+.
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~ 60 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD 60 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 666667788999999999999999999999999998888877774 664
No 158
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=93.16 E-value=0.6 Score=49.48 Aligned_cols=50 Identities=12% Similarity=0.090 Sum_probs=42.4
Q ss_pred EEEeccCCCCcchHHHHHHHHhcCCeEEEEcC---CCHHHHHHHHHHcCCCCC
Q 047874 557 GLVGLKDPCRPGVRAAVESCRNAGVNVKMVTG---DNVHTARAIAIECGILNP 606 (941)
Q Consensus 557 G~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TG---d~~~~a~~ia~~~gi~~~ 606 (941)
|.+.-.+.+-+++.++|++|+++|++++++|| +.........+++|+...
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~ 62 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPAT 62 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 55555677778999999999999999999996 888888888899998754
No 159
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=92.92 E-value=0.13 Score=52.99 Aligned_cols=100 Identities=19% Similarity=0.205 Sum_probs=59.1
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHH--HHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEE
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHT--ARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMA 641 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~--a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~ 641 (941)
++.|++.+.++.|+++|+++.++|+..... ........++... .+.++.+.+. -..
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~------fd~v~~s~~~----------------~~~ 151 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMAL------FDAVVESCLE----------------GLR 151 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhh------CCEEEEeeec----------------CCC
Confidence 568999999999999999999999875432 2222223333211 0011111000 001
Q ss_pred ecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc-EEec
Q 047874 642 RSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG-LSMG 685 (941)
Q Consensus 642 ~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~ 685 (941)
+-.|+-=..+.+.+.-..+.+++|||...|+.+-++||+- |.+.
T Consensus 152 KP~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~ 196 (211)
T TIGR02247 152 KPDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTIKVS 196 (211)
T ss_pred CCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEEEEC
Confidence 1223332334444443456799999999999999999984 4443
No 160
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=92.86 E-value=0.29 Score=47.78 Aligned_cols=86 Identities=17% Similarity=0.097 Sum_probs=65.3
Q ss_pred cCCCCcchHHHHHHHHhcCC--eEEEEcCC-------CHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHH
Q 047874 562 KDPCRPGVRAAVESCRNAGV--NVKMVTGD-------NVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIA 632 (941)
Q Consensus 562 ~d~~~~~~~~~I~~l~~aGi--~v~i~TGd-------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 632 (941)
++++.++..+.+++|++.+. +|+++|.. +...|..+++.+|+..-
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpvl-------------------------- 110 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPVL-------------------------- 110 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcEE--------------------------
Confidence 46678999999999999987 49999987 48899999999998620
Q ss_pred hhcCceEEEecCHHHHHHHHHHHHhC-----CCEEEEEcCCc-cCHHHHHhCC
Q 047874 633 KIESIRVMARSSPLDKLLMVQSLKQK-----GHVVAVTGDGT-NDAPALRAAD 679 (941)
Q Consensus 633 ~~~~~~v~~~~~p~~K~~iv~~l~~~-----g~~v~~iGDg~-ND~~~l~~A~ 679 (941)
.+..-.|.-..++.+.++.+ .+.+++|||-. .|+-|=...|
T Consensus 111 ------~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G 157 (168)
T PF09419_consen 111 ------RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMG 157 (168)
T ss_pred ------EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccC
Confidence 12334786667888888765 67899999963 4665544443
No 161
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=92.65 E-value=0.16 Score=52.72 Aligned_cols=96 Identities=16% Similarity=0.150 Sum_probs=64.4
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.++++.| ++++.++|+.....+...-+..|+...- ...++++.+... .+-
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F-----~~~v~~~~~~~~----------------~KP 143 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYF-----PDKLFSGYDIQR----------------WKP 143 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhC-----cceEeeHHhcCC----------------CCC
Confidence 4568999999998 4899999999988888888888886420 012233322110 111
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEE
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLS 683 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIa 683 (941)
.|+-=....+.+.-..+.+++|||+.+|..+=++||+.+.
T Consensus 144 ~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i 183 (221)
T PRK10563 144 DPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVF 183 (221)
T ss_pred ChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEE
Confidence 2333334444444345679999999999999999998764
No 162
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=92.48 E-value=0.8 Score=45.26 Aligned_cols=52 Identities=27% Similarity=0.382 Sum_probs=43.0
Q ss_pred EEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHH---HcCCCC
Q 047874 554 TLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAI---ECGILN 605 (941)
Q Consensus 554 ~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~---~~gi~~ 605 (941)
.+-|.+.++|..-|++.++++.|++++.+|..+|....+.-..+.+ ++|+.-
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v 67 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDV 67 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCc
Confidence 3569999999999999999999999999999999877766655554 456653
No 163
>PLN02645 phosphoglycolate phosphatase
Probab=92.44 E-value=0.38 Score=52.84 Aligned_cols=49 Identities=18% Similarity=0.258 Sum_probs=40.7
Q ss_pred EEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHH---HHcCCCC
Q 047874 557 GLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIA---IECGILN 605 (941)
Q Consensus 557 G~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia---~~~gi~~ 605 (941)
|++.-.+.+-+++.++|+.|+++|++++++|++...+...++ +++|+..
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~ 88 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNV 88 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 666666778899999999999999999999999977776666 5677753
No 164
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=92.12 E-value=0.36 Score=53.25 Aligned_cols=95 Identities=5% Similarity=0.034 Sum_probs=67.5
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHH----cCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceE
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIE----CGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRV 639 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~----~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v 639 (941)
++.+++.++++.|+++|++..++|.-+...+..+.+. +|+...- ..+..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f---------------------------~~~~~ 83 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF---------------------------DARSI 83 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe---------------------------eEEEE
Confidence 3568999999999999999999999999999999888 7665310 00001
Q ss_pred EEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEec
Q 047874 640 MARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMG 685 (941)
Q Consensus 640 ~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~ 685 (941)
.....|+.=.++.+.+.-..+.++++||...|..+.+.+...+.+-
T Consensus 84 ~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 84 NWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred ecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 1112233333344444333578999999999999999988876554
No 165
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=91.64 E-value=0.32 Score=49.58 Aligned_cols=97 Identities=15% Similarity=0.108 Sum_probs=59.7
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHH-cCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEe
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIE-CGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMAR 642 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~-~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 642 (941)
++.|++.++++.|+++|+++.++|.-+.......... .++... ...++...+.. ...
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~------fd~v~~s~~~~----------------~~K 141 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAA------ADHIYLSQDLG----------------MRK 141 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHh------cCEEEEecccC----------------CCC
Confidence 3689999999999999999999999876654433222 233210 01111111100 001
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccE
Q 047874 643 SSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGL 682 (941)
Q Consensus 643 ~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgI 682 (941)
-+|+-=..+++.+.-..+.++++||...|+.+-++||+-.
T Consensus 142 P~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 142 PEARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred CCHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 1233223444444444678999999999999999999853
No 166
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=91.51 E-value=0.2 Score=49.94 Aligned_cols=108 Identities=20% Similarity=0.298 Sum_probs=68.0
Q ss_pred CCCcchHHHHHHHHhcCC-eEEEEcCCCHHHHHHHHHHcCCCCC-------CCCCC-cccceecchhcccCCHHHHHHhh
Q 047874 564 PCRPGVRAAVESCRNAGV-NVKMVTGDNVHTARAIAIECGILNP-------DVDLN-KDEAVIEGVQFRSLSAEERIAKI 634 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi-~v~i~TGd~~~~a~~ia~~~gi~~~-------~~~~~-~~~~~~~g~~~~~~~~~~~~~~~ 634 (941)
|+-|+..++|+.+++.|- .++++|--|..-...+-+..|+..- ....+ .....+....
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH------------- 150 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYH------------- 150 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCC-------------
Confidence 567999999999999997 9999999999888888888887531 00000 0000000000
Q ss_pred cCceEEEecCH-HHHHHHHHHHHhC-------CCEEEEEcCCccC-HHHHHhCCccEEec
Q 047874 635 ESIRVMARSSP-LDKLLMVQSLKQK-------GHVVAVTGDGTND-APALRAADIGLSMG 685 (941)
Q Consensus 635 ~~~~v~~~~~p-~~K~~iv~~l~~~-------g~~v~~iGDg~ND-~~~l~~A~vgIam~ 685 (941)
.-.-+.+|-+ .=|..++..++.. -+.+.++|||.|| +|+++...--+||-
T Consensus 151 -~~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 151 -TQHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred -CCCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecc
Confidence 0001222222 2366666655533 2389999999999 57877766666765
No 167
>PLN02151 trehalose-phosphatase
Probab=91.18 E-value=2.1 Score=47.24 Aligned_cols=62 Identities=18% Similarity=0.264 Sum_probs=43.5
Q ss_pred HHHHHHHHHHhC-C------CEEEEEcCCccCHHHHHhC-----CccEEecCCCcHHHHhccCEEeccCCchHHHHHHH
Q 047874 647 DKLLMVQSLKQK-G------HVVAVTGDGTNDAPALRAA-----DIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLR 713 (941)
Q Consensus 647 ~K~~iv~~l~~~-g------~~v~~iGDg~ND~~~l~~A-----~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 713 (941)
+|...++.+.+. + ..++++||...|-.||+.. |+||-+| .+.. .-.|++.+. +.+.+.+.++
T Consensus 269 dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg-~~~k--~T~A~y~L~--dp~eV~~~L~ 342 (354)
T PLN02151 269 DKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVS-KYAK--ETNASYSLQ--EPDEVMEFLE 342 (354)
T ss_pred CHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEec-cCCC--CCcceEeCC--CHHHHHHHHH
Confidence 888888887654 1 2489999999999998853 6777776 2211 125888887 5666666654
No 168
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=91.15 E-value=0.24 Score=51.52 Aligned_cols=88 Identities=22% Similarity=0.261 Sum_probs=56.5
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHH---HHHHHHHHcCCCCCCCCCCcccceecchhc-ccCCHHHHHHhhcCceE
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVH---TARAIAIECGILNPDVDLNKDEAVIEGVQF-RSLSAEERIAKIESIRV 639 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~---~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~v 639 (941)
+.-|++.+.++.+++.|++|+++|||+.. .+..-.++.|.... +..++.+..- ..
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~------~~l~lr~~~~~~~--------------- 173 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW------DHLILRPDKDPSK--------------- 173 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB------SCGEEEEESSTSS---------------
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc------chhcccccccccc---------------
Confidence 34578999999999999999999999765 33444566676541 1222222110 00
Q ss_pred EEecCHHHHHHHHHHHHhCCC-EEEEEcCCccCHHH
Q 047874 640 MARSSPLDKLLMVQSLKQKGH-VVAVTGDGTNDAPA 674 (941)
Q Consensus 640 ~~~~~p~~K~~iv~~l~~~g~-~v~~iGDg~ND~~~ 674 (941)
....+-|..--+.+.+.|+ .++.+||..+|..-
T Consensus 174 --~~~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 174 --KSAVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp --------SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred --ccccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 0012347777888888865 56779999999764
No 169
>PHA02597 30.2 hypothetical protein; Provisional
Probab=90.26 E-value=0.7 Score=46.93 Aligned_cols=95 Identities=13% Similarity=0.077 Sum_probs=55.7
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.|++.+++++|++.+ +.+++|..+.......-+.+|+...... ..+.+ +.++.
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~--~f~~i----------------------~~~~~ 128 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPG--AFSEV----------------------LMCGH 128 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCC--cccEE----------------------EEecc
Confidence 35789999999999985 5677777655554445566666421000 00111 11222
Q ss_pred CHHHHHHHHH-HHHhCC-CEEEEEcCCccCHHHHHhC--Ccc-EEe
Q 047874 644 SPLDKLLMVQ-SLKQKG-HVVAVTGDGTNDAPALRAA--DIG-LSM 684 (941)
Q Consensus 644 ~p~~K~~iv~-~l~~~g-~~v~~iGDg~ND~~~l~~A--~vg-Iam 684 (941)
.. .|-+++. .+++.| +.+++|||..+|+.+-++| |+- |.+
T Consensus 129 ~~-~kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~i~~ 173 (197)
T PHA02597 129 DE-SKEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPVIHM 173 (197)
T ss_pred Cc-ccHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcEEEe
Confidence 11 1223322 233333 4688999999999999999 995 344
No 170
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=90.20 E-value=0.7 Score=46.34 Aligned_cols=98 Identities=12% Similarity=0.034 Sum_probs=64.4
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.+++++|+ .+++++|+.+...+....+.+|+... ...++.+.+...- ...+.-
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~------fd~i~~~~~~~~~------------~~~~KP 142 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDC------FDGIFCFDTANPD------------YLLPKP 142 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhh------hCeEEEeecccCc------------cCCCCC
Confidence 36789999999998 47999999999999999999998542 1112221111000 000122
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccE
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGL 682 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgI 682 (941)
.|+-=..+++.+....+.+++|||...|+.+=+.||+..
T Consensus 143 ~p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 143 SPQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred CHHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 333334455555555678999999999999999888753
No 171
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=90.06 E-value=1.8 Score=50.36 Aligned_cols=100 Identities=12% Similarity=0.011 Sum_probs=63.4
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHH-cCCCCC-CCCCCc-ccceecchhcccCCHHHHHHhhcCceEEE
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIE-CGILNP-DVDLNK-DEAVIEGVQFRSLSAEERIAKIESIRVMA 641 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~-~gi~~~-~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~v~~ 641 (941)
+++++.+ .++++|.+ +++|+-...-++.+|++ +|++.- ...++. ..-..+|. +-.
T Consensus 111 l~~~a~~---~~~~~g~~-vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~------------------i~g 168 (497)
T PLN02177 111 VHPETWR---VFNSFGKR-YIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGF------------------MKK 168 (497)
T ss_pred cCHHHHH---HHHhCCCE-EEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeee------------------ecC
Confidence 4555444 44567754 99999999999999987 898731 000110 01122221 111
Q ss_pred --ecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecC
Q 047874 642 --RSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGI 686 (941)
Q Consensus 642 --~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~ 686 (941)
.+.-++|.+-++..........+.||+.||.|||+.|+-+.+++.
T Consensus 169 ~~~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 169 PGVLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred CCCCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 134467887776433211223789999999999999999999983
No 172
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=89.93 E-value=1.6 Score=45.96 Aligned_cols=89 Identities=18% Similarity=0.201 Sum_probs=53.3
Q ss_pred cCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHH---HHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCce
Q 047874 562 KDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAI---AIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIR 638 (941)
Q Consensus 562 ~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~i---a~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 638 (941)
+.|.-|++.+..+.+++.|++|+++|||....-... -++.|.... ..+++.+..-.
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~------~~LiLR~~~D~--------------- 201 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW------EKLILKDPQDN--------------- 201 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc------ceeeecCCCCC---------------
Confidence 346678999999999999999999999986432222 234576531 11222111000
Q ss_pred EEEecCHHHHHHHHHHHHhCCC-EEEEEcCCccCH
Q 047874 639 VMARSSPLDKLLMVQSLKQKGH-VVAVTGDGTNDA 672 (941)
Q Consensus 639 v~~~~~p~~K~~iv~~l~~~g~-~v~~iGDg~ND~ 672 (941)
-.....+-|...-+.+.+.|+ +++.+||-.+|.
T Consensus 202 -~~~~av~yKs~~R~~li~eGYrIv~~iGDq~sDl 235 (275)
T TIGR01680 202 -SAENAVEYKTAARAKLIQEGYNIVGIIGDQWNDL 235 (275)
T ss_pred -ccchhHHHHHHHHHHHHHcCceEEEEECCCHHhc
Confidence 000011345555555556666 557799999996
No 173
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=89.70 E-value=0.75 Score=46.21 Aligned_cols=90 Identities=19% Similarity=0.162 Sum_probs=61.3
Q ss_pred hHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHH
Q 047874 569 VRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDK 648 (941)
Q Consensus 569 ~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 648 (941)
..+.++.|++. ++..++||.....+....+..|+... ...++.+.+.. ..+-.|+-=
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~------fd~i~~~~~~~----------------~~KP~p~~~ 148 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRY------FDAVVAADDVQ----------------HHKPAPDTF 148 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhH------ceEEEehhhcc----------------CCCCChHHH
Confidence 36889999865 89999999999999999999998642 11222222110 111223333
Q ss_pred HHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc
Q 047874 649 LLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG 681 (941)
Q Consensus 649 ~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg 681 (941)
....+.++-....+++|||..+|+.+-+.||+-
T Consensus 149 ~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 149 LRCAQLMGVQPTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCE
Confidence 444444544456789999999999999999884
No 174
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=89.42 E-value=0.75 Score=42.75 Aligned_cols=31 Identities=13% Similarity=0.153 Sum_probs=28.0
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEcCCCHHH
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVTGDNVHT 593 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~ 593 (941)
+++.+++.+++++++++|++++++|||+...
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~ 53 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRT 53 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchh
Confidence 5688899999999999999999999998764
No 175
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=89.27 E-value=0.99 Score=46.83 Aligned_cols=98 Identities=17% Similarity=0.235 Sum_probs=75.6
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEe
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMAR 642 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 642 (941)
.++.+++.+.++.|++.|+.+.+.|+.....+..+.+.+|+... ...++++.+... .+
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~------f~~~v~~~dv~~----------------~K 142 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDY------FDVIVTADDVAR----------------GK 142 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhh------cchhccHHHHhc----------------CC
Confidence 36789999999999999999999999999999999999999753 223333332211 13
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccE
Q 047874 643 SSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGL 682 (941)
Q Consensus 643 ~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgI 682 (941)
-.|+-=....+.|.-....|+++.|+.|.+.+-++||.-+
T Consensus 143 P~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~v 182 (221)
T COG0637 143 PAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRV 182 (221)
T ss_pred CCCHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEE
Confidence 3455556666666556778999999999999999999864
No 176
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=86.23 E-value=1.2 Score=46.73 Aligned_cols=62 Identities=23% Similarity=0.288 Sum_probs=31.2
Q ss_pred EecCHHHHHHHHHHHHhCC-------CEEEEEcCCccCHHHHHhC------CccEEecCCCc-HHHHhccCEEeccC
Q 047874 641 ARSSPLDKLLMVQSLKQKG-------HVVAVTGDGTNDAPALRAA------DIGLSMGIQGT-EVAKESSDIVIMDD 703 (941)
Q Consensus 641 ~~~~p~~K~~iv~~l~~~g-------~~v~~iGDg~ND~~~l~~A------~vgIam~~~~~-~~a~~~ad~vl~~~ 703 (941)
.|..-..|...++.+-+.. ..++++||...|-.|++.. +++|-++ ... ....-+|+|-+.+.
T Consensus 159 vrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~-~~~~~~~~t~A~y~l~~p 234 (235)
T PF02358_consen 159 VRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVG-SVSVGEKPTAASYRLDDP 234 (235)
T ss_dssp EE-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES-------------------
T ss_pred EEeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEE-eecccccccccccccccC
Confidence 3444456999998877653 3699999999999998873 5677787 332 23334566666543
No 177
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=84.81 E-value=6.8 Score=41.62 Aligned_cols=45 Identities=20% Similarity=0.336 Sum_probs=38.9
Q ss_pred EEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHc
Q 047874 557 GLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIEC 601 (941)
Q Consensus 557 G~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~ 601 (941)
|.+.-.+++=|++.++|+.|+++|++++++|..+..+...+++++
T Consensus 17 Gvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 17 GVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred CceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 788888999999999999999999999999998877777555444
No 178
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=83.57 E-value=2.2 Score=41.12 Aligned_cols=91 Identities=21% Similarity=0.279 Sum_probs=63.0
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHH----HHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEE
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVH----TARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVM 640 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~----~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ 640 (941)
+++-+++.|..-++.|=.++.+|||.+. +++.+|+...|.+.+- .+|
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~p-----------------------------v~f 165 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNP-----------------------------VIF 165 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcc-----------------------------eee
Confidence 4566888999999999999999999865 4566777777754321 245
Q ss_pred EecCHH-HHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCc-cEEec
Q 047874 641 ARSSPL-DKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADI-GLSMG 685 (941)
Q Consensus 641 ~~~~p~-~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~v-gIam~ 685 (941)
+...|. .+..-...+|+++ .-..-||+.||..+-+.|++ ||-+-
T Consensus 166 ~Gdk~k~~qy~Kt~~i~~~~-~~IhYGDSD~Di~AAkeaG~RgIRil 211 (237)
T COG3700 166 AGDKPKPGQYTKTQWIQDKN-IRIHYGDSDNDITAAKEAGARGIRIL 211 (237)
T ss_pred ccCCCCcccccccHHHHhcC-ceEEecCCchhhhHHHhcCccceeEE
Confidence 544441 2223345566665 44677999999999999987 66543
No 179
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=82.73 E-value=2.1 Score=45.62 Aligned_cols=41 Identities=7% Similarity=0.084 Sum_probs=38.5
Q ss_pred CC-cchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 047874 565 CR-PGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILN 605 (941)
Q Consensus 565 ~~-~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~ 605 (941)
+| |++.+++++|+++|+++.++|+.....+...-+++|+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 55 999999999999999999999999999999999999975
No 180
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=82.66 E-value=2.6 Score=44.30 Aligned_cols=92 Identities=12% Similarity=0.044 Sum_probs=54.8
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++-|++.++++.|++. +++.++|..+.. .+..|+... ...++...+.. ...-
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~------fd~i~~~~~~~----------------~~KP 164 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDY------FEFVLRAGPHG----------------RSKP 164 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHh------hceeEecccCC----------------cCCC
Confidence 4568999999999975 899999986654 255666421 01111111100 0011
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCC-ccCHHHHHhCCccEE
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDG-TNDAPALRAADIGLS 683 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg-~ND~~~l~~A~vgIa 683 (941)
.|+-=....+.+.-..+.+++|||+ ..|+.+=++||+-..
T Consensus 165 ~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i 205 (238)
T PRK10748 165 FSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQAC 205 (238)
T ss_pred cHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEE
Confidence 1222223333333345679999999 599999999998644
No 181
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=80.13 E-value=7.4 Score=38.59 Aligned_cols=97 Identities=23% Similarity=0.225 Sum_probs=56.6
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCH---HHHHHhh--cCceE
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSA---EERIAKI--ESIRV 639 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~--~~~~v 639 (941)
+.+++.+++..++++|.+++|+|.-+ |+.... .++..+...+. +.+...- -....
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQs-----------Gi~rgy---------f~~~~f~~~~~~m~~~l~~~gv~id~i~ 91 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQS-----------GIGRGY---------FTEADFDKLHNKMLKILASQGVKIDGIL 91 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECCC-----------CccccC---------ccHHHHHHHHHHHHHHHHHcCCccceEE
Confidence 46899999999999999999999743 222110 01111111110 0000000 00113
Q ss_pred EEecCHH--------HHHHHHHHHHhCC---CEEEEEcCCccCHHHHHhCCcc
Q 047874 640 MARSSPL--------DKLLMVQSLKQKG---HVVAVTGDGTNDAPALRAADIG 681 (941)
Q Consensus 640 ~~~~~p~--------~K~~iv~~l~~~g---~~v~~iGDg~ND~~~l~~A~vg 681 (941)
+|...|+ ....+.+.+++.+ ....+|||...|..+-..|++.
T Consensus 92 ~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 92 YCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred ECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 3433343 3455566666654 6789999999999998888886
No 182
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=80.06 E-value=1 Score=44.17 Aligned_cols=44 Identities=14% Similarity=-0.045 Sum_probs=38.8
Q ss_pred ccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 047874 561 LKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILN 605 (941)
Q Consensus 561 ~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~ 605 (941)
+.=..||++.+.++.|.+. .++++.|......|..+.+.++...
T Consensus 39 ~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~ 82 (162)
T TIGR02251 39 VYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGG 82 (162)
T ss_pred EEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCC
Confidence 3345799999999999988 9999999999999999999998653
No 183
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=79.73 E-value=8.5 Score=41.47 Aligned_cols=49 Identities=18% Similarity=0.268 Sum_probs=36.9
Q ss_pred EEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHH---HHHHcCCCC
Q 047874 557 GLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARA---IAIECGILN 605 (941)
Q Consensus 557 G~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~---ia~~~gi~~ 605 (941)
|++.-.+.+-+++.++|++|+++|++++++|++...+... -.+++|+..
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~ 62 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNG 62 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 4555567778899999999999999999999976443333 345677753
No 184
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=78.97 E-value=4 Score=47.80 Aligned_cols=40 Identities=15% Similarity=0.242 Sum_probs=33.4
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCH------------HHHHHHHHHcCCC
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNV------------HTARAIAIECGIL 604 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~------------~~a~~ia~~~gi~ 604 (941)
+-+++.++++.|+++|++++++|.-.. ..+..+.+++|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 468999999999999999999998655 3467778888874
No 185
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=77.83 E-value=3.9 Score=43.67 Aligned_cols=41 Identities=15% Similarity=0.111 Sum_probs=37.4
Q ss_pred CC-cchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 047874 565 CR-PGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILN 605 (941)
Q Consensus 565 ~~-~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~ 605 (941)
+| |++.+++++|+++|+++.++|+.+...+....+.+|+..
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~ 189 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEG 189 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCc
Confidence 34 899999999999999999999888888899999999974
No 186
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=75.89 E-value=10 Score=40.26 Aligned_cols=43 Identities=7% Similarity=-0.005 Sum_probs=34.3
Q ss_pred eccCCCCcchHHHHHHHHhc-CCeEEEEcCCCHHHHHHHHHHcC
Q 047874 560 GLKDPCRPGVRAAVESCRNA-GVNVKMVTGDNVHTARAIAIECG 602 (941)
Q Consensus 560 ~~~d~~~~~~~~~I~~l~~a-Gi~v~i~TGd~~~~a~~ia~~~g 602 (941)
-....+-++..+.+++|... ..-++|+|||+.........--|
T Consensus 36 p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~ 79 (266)
T COG1877 36 PEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPG 79 (266)
T ss_pred ccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCC
Confidence 34556778899999999987 55799999999998888776333
No 187
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=73.82 E-value=9.2 Score=39.82 Aligned_cols=132 Identities=19% Similarity=0.262 Sum_probs=69.7
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecch-hcccCCHHHHHHhhcCceEEE
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGV-QFRSLSAEERIAKIESIRVMA 641 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~v~~ 641 (941)
-.+|+++.+.++.|++.+|.+.++|+.=-.....+-++.|...++. .+++.. .+++- -.+.+
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv------~VvSN~M~Fd~~-----------g~l~g 151 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNV------KVVSNFMDFDED-----------GVLVG 151 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTE------EEEEE-EEE-TT-----------SBEEE
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCe------EEEeeeEEECCc-----------ceEee
Confidence 3579999999999999999999999988888888888888776543 111111 00000 00000
Q ss_pred ec----CHHHHHH-------HHHHHHhCCCEEEEEcCCccCHHHHHhC---CccEEecC-CCc-H----HHHhccCEEec
Q 047874 642 RS----SPLDKLL-------MVQSLKQKGHVVAVTGDGTNDAPALRAA---DIGLSMGI-QGT-E----VAKESSDIVIM 701 (941)
Q Consensus 642 ~~----~p~~K~~-------iv~~l~~~g~~v~~iGDg~ND~~~l~~A---~vgIam~~-~~~-~----~a~~~ad~vl~ 701 (941)
=. .+-.|-+ .-+.++. ...|+..||+.-|+.|-.-. +.-+.+|- |.. + .-+++=|+|+.
T Consensus 152 F~~~lIH~~NKn~~~l~~~~~~~~~~~-R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv 230 (246)
T PF05822_consen 152 FKGPLIHTFNKNESALEDSPYFKQLKK-RTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLV 230 (246)
T ss_dssp E-SS---TT-HHHHHHTTHHHHHCTTT---EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEE
T ss_pred cCCCceEEeeCCcccccCchHHHHhcc-CCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEE
Confidence 00 0112221 1122222 45799999999999996544 33333331 222 2 34567899999
Q ss_pred cCCchHHHHHH
Q 047874 702 DDNFSSVVTVL 712 (941)
Q Consensus 702 ~~~~~~i~~~i 712 (941)
+|.--.++..|
T Consensus 231 ~D~tm~v~~~i 241 (246)
T PF05822_consen 231 DDQTMDVPNAI 241 (246)
T ss_dssp T--B-HHHHHH
T ss_pred CCCCchHHHHH
Confidence 88766665544
No 188
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=72.65 E-value=12 Score=38.59 Aligned_cols=122 Identities=18% Similarity=0.204 Sum_probs=71.8
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++-+++.+++++++.. .+++++|.-....+....+++|+... .+.++...+ ....
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~------Fd~v~~s~~------------------~g~~ 153 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDY------FDAVFISED------------------VGVA 153 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhh------hheEEEecc------------------cccC
Confidence 4568899999999999 99999999888889999999997542 111111111 1122
Q ss_pred CHHHH--HHHHHHHHhCCCEEEEEcCC-ccCHHHHHhCCc-cEEecCCCcH--HHHhccCEEeccCCchHHHHHH
Q 047874 644 SPLDK--LLMVQSLKQKGHVVAVTGDG-TNDAPALRAADI-GLSMGIQGTE--VAKESSDIVIMDDNFSSVVTVL 712 (941)
Q Consensus 644 ~p~~K--~~iv~~l~~~g~~v~~iGDg-~ND~~~l~~A~v-gIam~~~~~~--~a~~~ad~vl~~~~~~~i~~~i 712 (941)
.|..+ ..+.+.+.-..+.+++|||+ .||+..-+++|. +|-+...+.. ......|+.+. ++..+..++
T Consensus 154 KP~~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i~--~l~~l~~~~ 226 (229)
T COG1011 154 KPDPEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEIS--SLAELLDLL 226 (229)
T ss_pred CCCcHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEEc--CHHHHHHHH
Confidence 33222 23333343345689999996 567566666776 3444311111 11134555554 455555443
No 189
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=72.13 E-value=3.8 Score=40.48 Aligned_cols=85 Identities=15% Similarity=0.126 Sum_probs=55.2
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.|++.++++ ++.++|.-+........+.+|+... ...++++++.. ...-
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~------fd~v~~~~~~~----------------~~KP 140 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWY------FDRAFSVDTVR----------------AYKP 140 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHH------HhhhccHhhcC----------------CCCC
Confidence 46789999998 3789999999988889999998642 11122222110 1122
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHh
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRA 677 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~ 677 (941)
.|+-=..+.+.+.-..+.+++|||+..|+.+-++
T Consensus 141 ~p~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~ 174 (175)
T TIGR01493 141 DPVVYELVFDTVGLPPDRVLMVAAHQWDLIGARK 174 (175)
T ss_pred CHHHHHHHHHHHCCCHHHeEeEecChhhHHHHhc
Confidence 3333244555555456789999999999887654
No 190
>PTZ00445 p36-lilke protein; Provisional
Probab=71.96 E-value=9.1 Score=38.69 Aligned_cols=138 Identities=14% Similarity=0.221 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHhcccceeeeeeeccccccccchhhhhccCcEEEE-----E-------EeccCCCCcchHHHHHHHHhc
Q 047874 512 RTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLG-----L-------VGLKDPCRPGVRAAVESCRNA 579 (941)
Q Consensus 512 ~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG-----~-------i~~~d~~~~~~~~~I~~l~~a 579 (941)
.+.....++.+.+.|.|++++-.. .|+++ . ..+--.++|+.++-+++|+++
T Consensus 28 ~~~~~~~v~~L~~~GIk~Va~D~D-----------------nTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~ 90 (219)
T PTZ00445 28 HESADKFVDLLNECGIKVIASDFD-----------------LTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNS 90 (219)
T ss_pred HHHHHHHHHHHHHcCCeEEEecch-----------------hhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHC
Confidence 456677788899999999987542 22222 0 111123799999999999999
Q ss_pred CCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEe-----------------
Q 047874 580 GVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMAR----------------- 642 (941)
Q Consensus 580 Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~----------------- 642 (941)
||++.++|=-...+ +..+ .....+.|.++-...-++-.....-..++|-
T Consensus 91 ~I~v~VVTfSd~~~---------~~~~-----~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~gl~ 156 (219)
T PTZ00445 91 NIKISVVTFSDKEL---------IPSE-----NRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLGLD 156 (219)
T ss_pred CCeEEEEEccchhh---------cccc-----CCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhccc
Confidence 99999999766543 2111 2345556655433221110000111112221
Q ss_pred -cCHHHHHH----HHHHHHhCCCEEEEEcCCccCHHHHHhCCc
Q 047874 643 -SSPLDKLL----MVQSLKQKGHVVAVTGDGTNDAPALRAADI 680 (941)
Q Consensus 643 -~~p~~K~~----iv~~l~~~g~~v~~iGDg~ND~~~l~~A~v 680 (941)
-.|+.|.. +++...-..+.++++=|....+.+-++.|+
T Consensus 157 KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi 199 (219)
T PTZ00445 157 APMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGY 199 (219)
T ss_pred CCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCC
Confidence 13344333 333333235689999999999998888766
No 191
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=71.40 E-value=14 Score=39.89 Aligned_cols=65 Identities=18% Similarity=0.247 Sum_probs=42.3
Q ss_pred eEEEecCHHHHHHHHHHHHh--CCCEEEEEcCC-ccCHH---HHHhCCccEEecCCC---cHHHHhccCEEecc
Q 047874 638 RVMARSSPLDKLLMVQSLKQ--KGHVVAVTGDG-TNDAP---ALRAADIGLSMGIQG---TEVAKESSDIVIMD 702 (941)
Q Consensus 638 ~v~~~~~p~~K~~iv~~l~~--~g~~v~~iGDg-~ND~~---~l~~A~vgIam~~~~---~~~a~~~ad~vl~~ 702 (941)
.-|.-|||..=.++++...- .|..|+++|-| .-=.| +|..+|..+.+-.+. ...+...||+++.-
T Consensus 136 ~~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIsa 209 (301)
T PRK14194 136 DVLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVAA 209 (301)
T ss_pred CCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEEe
Confidence 34667788777777776643 38999999997 44444 477777776654121 22345678998863
No 192
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=68.84 E-value=17 Score=39.34 Aligned_cols=64 Identities=17% Similarity=0.321 Sum_probs=41.1
Q ss_pred eEEEecCHHHHHHHHHHHHh--CCCEEEEEcCC-ccCHH---HHHhCCccEEecCC---CcHHHHhccCEEec
Q 047874 638 RVMARSSPLDKLLMVQSLKQ--KGHVVAVTGDG-TNDAP---ALRAADIGLSMGIQ---GTEVAKESSDIVIM 701 (941)
Q Consensus 638 ~v~~~~~p~~K~~iv~~l~~--~g~~v~~iGDg-~ND~~---~l~~A~vgIam~~~---~~~~a~~~ad~vl~ 701 (941)
..|.-|||..=.++++...- .|..|+++|-+ .-=.| +|..++..+.+-.+ ..+.+...||+++.
T Consensus 135 ~~~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l~e~~~~ADIVIs 207 (296)
T PRK14188 135 TALVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDLPAVCRRADILVA 207 (296)
T ss_pred CCCcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCHHHHHhcCCEEEE
Confidence 34667777777777766532 48999999944 33433 47777777766511 22345567899876
No 193
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=65.34 E-value=28 Score=35.81 Aligned_cols=85 Identities=13% Similarity=0.125 Sum_probs=55.4
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHH----HHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEE
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHT----ARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVM 640 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~----a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ 640 (941)
+-||+.+.++...+.|.+|..+|.|.... +..--++.|++.... +.-++
T Consensus 123 ~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~---------------------------~~~ll 175 (274)
T COG2503 123 AVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLE---------------------------SHLLL 175 (274)
T ss_pred cCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccc---------------------------cceEE
Confidence 45899999999999999999999998776 445556667764211 11122
Q ss_pred EecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHh
Q 047874 641 ARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRA 677 (941)
Q Consensus 641 ~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~ 677 (941)
-+ ....|..=-+.+++.-..||.+||..+|-.....
T Consensus 176 kk-~~k~Ke~R~~~v~k~~~iVm~vGDNl~DF~d~~~ 211 (274)
T COG2503 176 KK-DKKSKEVRRQAVEKDYKIVMLVGDNLDDFGDNAY 211 (274)
T ss_pred ee-CCCcHHHHHHHHhhccceeeEecCchhhhcchhh
Confidence 21 1223333333344455688999999999765443
No 194
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=64.48 E-value=23 Score=37.90 Aligned_cols=63 Identities=14% Similarity=0.267 Sum_probs=38.3
Q ss_pred EEEecCHHHHHHHHHHHHh--CCCEEEEEcCCccC----HHHHHhC--CccEEecCCCcH--HHHhccCEEecc
Q 047874 639 VMARSSPLDKLLMVQSLKQ--KGHVVAVTGDGTND----APALRAA--DIGLSMGIQGTE--VAKESSDIVIMD 702 (941)
Q Consensus 639 v~~~~~p~~K~~iv~~l~~--~g~~v~~iGDg~ND----~~~l~~A--~vgIam~~~~~~--~a~~~ad~vl~~ 702 (941)
-|.-|||..=.++++...- .|..|+.+|.|..= +.||... .|-++-. ...+ ..-..||+++.-
T Consensus 135 ~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs-~T~~l~~~~~~ADIvI~A 207 (284)
T PRK14170 135 SFVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHS-RTKDLPQVAKEADILVVA 207 (284)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCC-CCCCHHHHHhhCCEEEEe
Confidence 3566777777777766542 38899999997552 3345444 4444443 2222 234678988763
No 195
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=63.48 E-value=30 Score=37.01 Aligned_cols=64 Identities=16% Similarity=0.281 Sum_probs=39.5
Q ss_pred EEEecCHHHHHHHHHHHHh--CCCEEEEEcCCccC----HHHHHhCCccEEecCCCc-H--HHHhccCEEecc
Q 047874 639 VMARSSPLDKLLMVQSLKQ--KGHVVAVTGDGTND----APALRAADIGLSMGIQGT-E--VAKESSDIVIMD 702 (941)
Q Consensus 639 v~~~~~p~~K~~iv~~l~~--~g~~v~~iGDg~ND----~~~l~~A~vgIam~~~~~-~--~a~~~ad~vl~~ 702 (941)
-|.-|||..=.++++.+.- .|..|+.+|.+..= +.||...|..|.+.-+.+ + ..-..||+++.-
T Consensus 134 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~A 206 (282)
T PRK14169 134 TVVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLKQLTKEADILVVA 206 (282)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEc
Confidence 4566788777777776643 48999999997552 335555555444431222 2 234678998763
No 196
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=62.78 E-value=26 Score=37.57 Aligned_cols=63 Identities=19% Similarity=0.309 Sum_probs=40.7
Q ss_pred EEEecCHHHHHHHHHHHHh--CCCEEEEEcC-CccCHH---HHHhCCccEEecCCCc-H--HHHhccCEEec
Q 047874 639 VMARSSPLDKLLMVQSLKQ--KGHVVAVTGD-GTNDAP---ALRAADIGLSMGIQGT-E--VAKESSDIVIM 701 (941)
Q Consensus 639 v~~~~~p~~K~~iv~~l~~--~g~~v~~iGD-g~ND~~---~l~~A~vgIam~~~~~-~--~a~~~ad~vl~ 701 (941)
-|.-|||..=.++++...- .|..++++|. |.-=.| +|.++|..+.+-.+.+ + .....||+++.
T Consensus 136 ~~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~ 207 (284)
T PRK14179 136 VMIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVV 207 (284)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEE
Confidence 4667788877777766543 3899999999 554544 4666666665531222 2 24577999886
No 197
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=62.41 E-value=23 Score=38.25 Aligned_cols=62 Identities=15% Similarity=0.214 Sum_probs=40.4
Q ss_pred EEEecCHHHHHHHHHHHHh--CCCEEEEEcCCccC---HH-HHH------hCCccEEecCCCc--HHHHhccCEEec
Q 047874 639 VMARSSPLDKLLMVQSLKQ--KGHVVAVTGDGTND---AP-ALR------AADIGLSMGIQGT--EVAKESSDIVIM 701 (941)
Q Consensus 639 v~~~~~p~~K~~iv~~l~~--~g~~v~~iGDg~ND---~~-~l~------~A~vgIam~~~~~--~~a~~~ad~vl~ 701 (941)
-|.-|||..=.++++...- .|..|+++|.+..= .. ||. .|.|-++.. +.. ......||+++.
T Consensus 137 ~~~PcTp~ail~ll~~y~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs-~t~~l~~~~~~ADIvI~ 212 (295)
T PRK14174 137 CFVSCTPYGILELLGRYNIETKGKHCVVVGRSNIVGKPMANLMLQKLKESNCTVTICHS-ATKDIPSYTRQADILIA 212 (295)
T ss_pred CcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHhccccCCCEEEEEeC-CchhHHHHHHhCCEEEE
Confidence 4566788877777766643 38999999998652 22 443 366666654 332 234578999886
No 198
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=61.97 E-value=82 Score=39.46 Aligned_cols=37 Identities=8% Similarity=0.071 Sum_probs=30.7
Q ss_pred CCcchHHHHHHHHhc-CCeEEEEcCCCHHHHHHHHHHc
Q 047874 565 CRPGVRAAVESCRNA-GVNVKMVTGDNVHTARAIAIEC 601 (941)
Q Consensus 565 ~~~~~~~~I~~l~~a-Gi~v~i~TGd~~~~a~~ia~~~ 601 (941)
+.+++.+++++|.+. +-.|+++|||+...........
T Consensus 533 p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~ 570 (797)
T PLN03063 533 LHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEY 570 (797)
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCC
Confidence 567888999999865 7889999999999888877543
No 199
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=61.45 E-value=1.7e+02 Score=29.77 Aligned_cols=12 Identities=17% Similarity=0.360 Sum_probs=6.1
Q ss_pred HHHHHHHHHHHH
Q 047874 903 CIGIAAMSWPIG 914 (941)
Q Consensus 903 ~~~~~~~~~~~~ 914 (941)
.++++++.+.+.
T Consensus 183 ~iiig~i~~~~~ 194 (206)
T PF06570_consen 183 YIIIGVIAFALR 194 (206)
T ss_pred HHHHHHHHHHHH
Confidence 345555555553
No 200
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=61.08 E-value=31 Score=36.97 Aligned_cols=63 Identities=14% Similarity=0.202 Sum_probs=41.2
Q ss_pred eEEEecCHHHHHHHHHHHHh--CCCEEEEEcCCccC----HHHHHh------CCccEEecCCCcH--HHHhccCEEec
Q 047874 638 RVMARSSPLDKLLMVQSLKQ--KGHVVAVTGDGTND----APALRA------ADIGLSMGIQGTE--VAKESSDIVIM 701 (941)
Q Consensus 638 ~v~~~~~p~~K~~iv~~l~~--~g~~v~~iGDg~ND----~~~l~~------A~vgIam~~~~~~--~a~~~ad~vl~ 701 (941)
.-|.-|||..=.++++.+.- .|..|+.+|.+..= +.||.. |.|-++.. ...+ ..-..||+++.
T Consensus 134 ~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs-~t~~l~~~~~~ADIVI~ 210 (286)
T PRK14184 134 PGFRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHS-RTPDLAEECREADFLFV 210 (286)
T ss_pred CCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeC-CchhHHHHHHhCCEEEE
Confidence 34667788877777776652 38899999997552 335544 56666654 3333 34577999886
No 201
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=58.79 E-value=38 Score=36.26 Aligned_cols=62 Identities=18% Similarity=0.237 Sum_probs=37.1
Q ss_pred EEecCHHHHHHHHHHHH--hCCCEEEEEcCCccC----HHHHHh--CCccEEecCCCcH--HHHhccCEEecc
Q 047874 640 MARSSPLDKLLMVQSLK--QKGHVVAVTGDGTND----APALRA--ADIGLSMGIQGTE--VAKESSDIVIMD 702 (941)
Q Consensus 640 ~~~~~p~~K~~iv~~l~--~~g~~v~~iGDg~ND----~~~l~~--A~vgIam~~~~~~--~a~~~ad~vl~~ 702 (941)
|.-|||..=.++++..+ -.|..|+.+|.|..= +.||.. |.|.++-. ...+ ..-..||+++.-
T Consensus 136 ~~PcTp~avi~ll~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs-~T~nl~~~~~~ADIvI~A 207 (282)
T PRK14182 136 PRPCTPAGVMRMLDEARVDPKGKRALVVGRSNIVGKPMAMMLLERHATVTIAHS-RTADLAGEVGRADILVAA 207 (282)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCC-CCCCHHHHHhhCCEEEEe
Confidence 45677777666666654 248899999997552 345644 44444443 1112 233578988763
No 202
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=56.39 E-value=41 Score=36.04 Aligned_cols=64 Identities=17% Similarity=0.252 Sum_probs=40.0
Q ss_pred EEEecCHHHHHHHHHHHHh--CCCEEEEEcCCccC----HHHHHhCCccEEecCCCcH---HHHhccCEEecc
Q 047874 639 VMARSSPLDKLLMVQSLKQ--KGHVVAVTGDGTND----APALRAADIGLSMGIQGTE---VAKESSDIVIMD 702 (941)
Q Consensus 639 v~~~~~p~~K~~iv~~l~~--~g~~v~~iGDg~ND----~~~l~~A~vgIam~~~~~~---~a~~~ad~vl~~ 702 (941)
-|.-|||..=.++++...- .|..|+.+|-|..= +.||...|..|.+.-+.+. ..-..||+++.-
T Consensus 135 ~~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~~~~~~ADIvIsA 207 (282)
T PRK14166 135 GFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVA 207 (282)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 4566778777777776642 48999999998652 3456555555544312222 234678998763
No 203
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=56.28 E-value=2.7e+02 Score=34.76 Aligned_cols=77 Identities=10% Similarity=0.104 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCEEeeeecCCcccCcEEEEcCCCeeecceEEEecc-eEEEe
Q 047874 106 IFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGH-SLKVD 184 (941)
Q Consensus 106 ~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~g~-~l~Vd 184 (941)
.+++++++++++.-++.++++.++..+...+.... ... -++-|....+...|.+|-|.++++.. .+-+|
T Consensus 58 ~~~i~~~~~i~~~i~~~qe~~a~~~~~~L~~~~~~------~~~----V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaD 127 (755)
T TIGR01647 58 FVIILGLLLLNATIGFIEENKAGNAVEALKQSLAP------KAR----VLRDGKWQEIPASELVPGDVVRLKIGDIVPAD 127 (755)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCCC------eEE----EEECCEEEEEEhhhCcCCCEEEECCCCEEece
Confidence 44555566677777777776655554343332111 111 12347888999999999999999743 34445
Q ss_pred eccCCCCC
Q 047874 185 ESSMTGES 192 (941)
Q Consensus 185 es~LTGEs 192 (941)
=-.+.|+.
T Consensus 128 g~vi~g~~ 135 (755)
T TIGR01647 128 CRLFEGDY 135 (755)
T ss_pred EEEEecCc
Confidence 44555553
No 204
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=56.26 E-value=42 Score=35.99 Aligned_cols=71 Identities=15% Similarity=0.169 Sum_probs=42.0
Q ss_pred HHHhhcCceEEEecCHHHHHHHHHHHHh--CCCEEEEEcCCccC----HHHHHh--CCccEEecCCCcH--HHHhccCEE
Q 047874 630 RIAKIESIRVMARSSPLDKLLMVQSLKQ--KGHVVAVTGDGTND----APALRA--ADIGLSMGIQGTE--VAKESSDIV 699 (941)
Q Consensus 630 ~~~~~~~~~v~~~~~p~~K~~iv~~l~~--~g~~v~~iGDg~ND----~~~l~~--A~vgIam~~~~~~--~a~~~ad~v 699 (941)
+.+......-|.-|||..=.++++.++- .|..|+.+|.+.-= +.||.. |.|-++-. ...+ ..-..||++
T Consensus 127 ~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs-~t~~l~~~~~~ADIv 205 (284)
T PRK14190 127 VGRMMLGQDTFLPCTPHGILELLKEYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHS-KTKNLAELTKQADIL 205 (284)
T ss_pred HHHHhcCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeC-CchhHHHHHHhCCEE
Confidence 3333333334667788877777777652 48899999987552 334544 44444433 2222 245778888
Q ss_pred ec
Q 047874 700 IM 701 (941)
Q Consensus 700 l~ 701 (941)
+.
T Consensus 206 I~ 207 (284)
T PRK14190 206 IV 207 (284)
T ss_pred EE
Confidence 75
No 205
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=55.61 E-value=14 Score=30.60 Aligned_cols=52 Identities=23% Similarity=0.257 Sum_probs=35.2
Q ss_pred HHHHHHHHhCCCEEEEEcCC-ccCHHHHHhCCcc-EEecCCCc---HHH---HhccCEEec
Q 047874 649 LLMVQSLKQKGHVVAVTGDG-TNDAPALRAADIG-LSMGIQGT---EVA---KESSDIVIM 701 (941)
Q Consensus 649 ~~iv~~l~~~g~~v~~iGDg-~ND~~~l~~A~vg-Iam~~~~~---~~a---~~~ad~vl~ 701 (941)
..+.+.+.-....++||||. ..|+.+=+++++- |.+. .|. +.. ...+|+++.
T Consensus 11 ~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~-tG~~~~~~~~~~~~~pd~vv~ 70 (75)
T PF13242_consen 11 EQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVL-TGVYSPEDLEKAEHKPDYVVD 70 (75)
T ss_dssp HHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEES-SSSSCCCGHHHSSSTTSEEES
T ss_pred HHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEEC-CCCCCHHHHhccCCCCCEEEC
Confidence 34445554445689999999 9999999999883 5554 322 222 257888875
No 206
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=54.74 E-value=60 Score=35.76 Aligned_cols=49 Identities=14% Similarity=0.105 Sum_probs=39.6
Q ss_pred EEEeccCCCCcchHHHHHHHHhc----CCeEEEEcCCC---HHH-HHHHHHHcCCCC
Q 047874 557 GLVGLKDPCRPGVRAAVESCRNA----GVNVKMVTGDN---VHT-ARAIAIECGILN 605 (941)
Q Consensus 557 G~i~~~d~~~~~~~~~I~~l~~a----Gi~v~i~TGd~---~~~-a~~ia~~~gi~~ 605 (941)
|++.-.+++-+++.++++.|++. |+++..+|... ..+ +..+.+++|+..
T Consensus 9 GvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~ 65 (321)
T TIGR01456 9 GVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDV 65 (321)
T ss_pred CceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCC
Confidence 77777888999999999999999 99999999654 343 555667888754
No 207
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=53.61 E-value=48 Score=35.81 Aligned_cols=62 Identities=18% Similarity=0.214 Sum_probs=39.6
Q ss_pred EEEecCHHHHHHHHHHHHh--CCCEEEEEcCCccC----HHHHHh------CCccEEecCCCcH--HHHhccCEEec
Q 047874 639 VMARSSPLDKLLMVQSLKQ--KGHVVAVTGDGTND----APALRA------ADIGLSMGIQGTE--VAKESSDIVIM 701 (941)
Q Consensus 639 v~~~~~p~~K~~iv~~l~~--~g~~v~~iGDg~ND----~~~l~~------A~vgIam~~~~~~--~a~~~ad~vl~ 701 (941)
-|.-|||..=.++++.++- .|..|+.+|.+..= +.||.. |-|.++-. ...+ ..-..||+++.
T Consensus 135 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs-~T~~l~~~~~~ADIvIs 210 (297)
T PRK14167 135 RFKPCTPHGIQKLLAAAGVDTEGADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCHS-RTDDLAAKTRRADIVVA 210 (297)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeCC-CCCCHHHHHhhCCEEEE
Confidence 4556788777777776643 48999999998652 334543 44556544 2222 34577999886
No 208
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=53.53 E-value=48 Score=35.45 Aligned_cols=64 Identities=19% Similarity=0.275 Sum_probs=41.0
Q ss_pred EEEecCHHHHHHHHHHHHh--CCCEEEEEcCCccC----HHHHHhCCccEEecCCCc-H--HHHhccCEEecc
Q 047874 639 VMARSSPLDKLLMVQSLKQ--KGHVVAVTGDGTND----APALRAADIGLSMGIQGT-E--VAKESSDIVIMD 702 (941)
Q Consensus 639 v~~~~~p~~K~~iv~~l~~--~g~~v~~iGDg~ND----~~~l~~A~vgIam~~~~~-~--~a~~~ad~vl~~ 702 (941)
-|.-|||..=.++++.+.- .|..|+++|.+..= +.||.+.|..|.+.-+.+ + ..-..||+++.-
T Consensus 136 ~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~~~~~ADIvIsA 208 (278)
T PRK14172 136 CFLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKEVCKKADILVVA 208 (278)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 4667788887777777653 48999999998652 345665555554442222 2 234678998763
No 209
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=52.46 E-value=37 Score=31.33 Aligned_cols=83 Identities=13% Similarity=0.159 Sum_probs=58.6
Q ss_pred HHHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCC-e-EEEEcCCCHHHHHHH
Q 047874 520 QEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGV-N-VKMVTGDNVHTARAI 597 (941)
Q Consensus 520 ~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi-~-v~i~TGd~~~~a~~i 597 (941)
.-+...|++|+.++.. .+.+ ...+...+.+-.++++-.......+.+++.++.|+++|. + .+++-|..+..-..-
T Consensus 21 ~~l~~~G~~vi~lG~~-vp~e--~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~~~~~~~ 97 (122)
T cd02071 21 RALRDAGFEVIYTGLR-QTPE--EIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVGGGIIPPEDYEL 97 (122)
T ss_pred HHHHHCCCEEEECCCC-CCHH--HHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEEECCCCHHHHHH
Confidence 3467789998877653 2111 112333466777888888888899999999999999977 3 456666666555667
Q ss_pred HHHcCCCC
Q 047874 598 AIECGILN 605 (941)
Q Consensus 598 a~~~gi~~ 605 (941)
.++.|++.
T Consensus 98 ~~~~G~d~ 105 (122)
T cd02071 98 LKEMGVAE 105 (122)
T ss_pred HHHCCCCE
Confidence 77899764
No 210
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=52.07 E-value=61 Score=35.00 Aligned_cols=63 Identities=17% Similarity=0.221 Sum_probs=38.3
Q ss_pred EEEecCHHHHHHHHHHHHh--CCCEEEEEcCCccC----HHHHHhC--CccEEecCCCc-HHHHhccCEEec
Q 047874 639 VMARSSPLDKLLMVQSLKQ--KGHVVAVTGDGTND----APALRAA--DIGLSMGIQGT-EVAKESSDIVIM 701 (941)
Q Consensus 639 v~~~~~p~~K~~iv~~l~~--~g~~v~~iGDg~ND----~~~l~~A--~vgIam~~~~~-~~a~~~ad~vl~ 701 (941)
-|.-|||..=.++++.+.- .|..|+.+|.+..= +.||... .|-++-..... ...-..||+++.
T Consensus 136 ~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvIs 207 (297)
T PRK14186 136 GLRSCTPAGVMRLLRSQQIDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLASITREADILVA 207 (297)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEE
Confidence 3556777777777776643 38999999997552 3355444 44444431111 123467899876
No 211
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=51.85 E-value=52 Score=32.39 Aligned_cols=41 Identities=20% Similarity=0.231 Sum_probs=31.8
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEc-CCCHHHHHHHHHHcCCC
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVT-GDNVHTARAIAIECGIL 604 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~T-Gd~~~~a~~ia~~~gi~ 604 (941)
.+-|+++++++.|++.|+++.++| -+.+..|+.+-+.+++.
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 356999999999999999999999 57889999999999998
No 212
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=48.83 E-value=60 Score=34.83 Aligned_cols=64 Identities=16% Similarity=0.251 Sum_probs=39.4
Q ss_pred eEEEecCHHHHHHHHHHHHh--CCCEEEEEcCCcc-C---HHHHHhC--CccEEecCCCcH--HHHhccCEEecc
Q 047874 638 RVMARSSPLDKLLMVQSLKQ--KGHVVAVTGDGTN-D---APALRAA--DIGLSMGIQGTE--VAKESSDIVIMD 702 (941)
Q Consensus 638 ~v~~~~~p~~K~~iv~~l~~--~g~~v~~iGDg~N-D---~~~l~~A--~vgIam~~~~~~--~a~~~ad~vl~~ 702 (941)
.-|.-|||..=.++++..+- .|..|+.+|.|.. = +.||... .|-++-. ...+ ..-..||+++.-
T Consensus 134 ~~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs-~t~~l~~~~~~ADIvV~A 207 (285)
T PRK14191 134 DGFVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHI-LTKDLSFYTQNADIVCVG 207 (285)
T ss_pred CCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeC-CcHHHHHHHHhCCEEEEe
Confidence 34566788877777776653 3899999999833 1 3345444 4444433 2222 234678888763
No 213
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=48.61 E-value=1.1e+02 Score=31.49 Aligned_cols=62 Identities=13% Similarity=0.160 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HhcccCCCeEEEEECCEEeeeecCCcccCcEEEEcCCCeeecceEEEecce
Q 047874 109 VFLVVSVSAVSNFKQSRQFQA-LANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHS 180 (941)
Q Consensus 109 l~~~~~i~~~~~~~~~~~~~~-l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~g~~ 180 (941)
++++++++.+.++.++++.++ +.+..+...-+.. .=++-|....+...|.+|-|.+.++...
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----------~v~r~~~~~~i~~~~L~~GDiI~l~~g~ 64 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKV----------TVIRDGRWQKIPSSELVPGDIIILKAGD 64 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEE----------EEEETTEEEEEEGGGT-TTSEEEEETTE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccE----------EEEeccccccchHhhccceeeeeccccc
Confidence 445556666656655555444 4544333222122 2234479999999999999999997543
No 214
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=47.68 E-value=82 Score=29.66 Aligned_cols=83 Identities=13% Similarity=0.146 Sum_probs=55.6
Q ss_pred HHHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCC--eEEEEcCCC---HHH-
Q 047874 520 QEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGV--NVKMVTGDN---VHT- 593 (941)
Q Consensus 520 ~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi--~v~i~TGd~---~~~- 593 (941)
..+...|++|+-++...-++ .--+...+.+-..+|+-++--.--+..++.++.|+++|. ..+++-|-. ...
T Consensus 23 ~~l~~~GfeVi~LG~~v~~e---~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl~~~~vivGG~~vi~~~d~ 99 (134)
T TIGR01501 23 HAFTNAGFNVVNLGVLSPQE---EFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAGLEGILLYVGGNLVVGKQDF 99 (134)
T ss_pred HHHHHCCCEEEECCCCCCHH---HHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCCCCCCEEEecCCcCcChhhh
Confidence 34567899998877643221 111233456778899888888888889999999999987 356666642 111
Q ss_pred --HHHHHHHcCCCC
Q 047874 594 --ARAIAIECGILN 605 (941)
Q Consensus 594 --a~~ia~~~gi~~ 605 (941)
...-++++|+..
T Consensus 100 ~~~~~~l~~~Gv~~ 113 (134)
T TIGR01501 100 PDVEKRFKEMGFDR 113 (134)
T ss_pred HHHHHHHHHcCCCE
Confidence 244578899753
No 215
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=47.55 E-value=2.4e+02 Score=26.21 Aligned_cols=46 Identities=13% Similarity=0.200 Sum_probs=28.7
Q ss_pred EEEecCHHHHHHHHHHHHhCCCEEEEEcCCcc--CHHHHHhCCccEEec
Q 047874 639 VMARSSPLDKLLMVQSLKQKGHVVAVTGDGTN--DAPALRAADIGLSMG 685 (941)
Q Consensus 639 v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~N--D~~~l~~A~vgIam~ 685 (941)
++++..+.-..++++.+ .+-+.+...|-|.| |.++++.-||-++=.
T Consensus 42 ii~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~id~~~a~~~gI~V~n~ 89 (133)
T PF00389_consen 42 IIVGSGTPLTAEVLEAA-PNLKLISTAGAGVDNIDLEAAKERGIPVTNV 89 (133)
T ss_dssp EEESTTSTBSHHHHHHH-TT-SEEEESSSSCTTB-HHHHHHTTSEEEE-
T ss_pred EEEcCCCCcCHHHHhcc-ceeEEEEEcccccCcccHHHHhhCeEEEEEe
Confidence 44444442234455555 34457888899988 788999888888754
No 216
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=46.75 E-value=11 Score=31.91 Aligned_cols=24 Identities=29% Similarity=0.574 Sum_probs=17.9
Q ss_pred eecCCcccCcEEEE-cCCCeeecce
Q 047874 150 LSIFDVVVGEVVCL-KTGDQIPADG 173 (941)
Q Consensus 150 i~~~~Lv~GDiI~l-~~G~~iPaD~ 173 (941)
+.-.+|.+||.|.+ ++||.||-=.
T Consensus 45 i~~~~i~~Gd~V~V~raGdVIP~I~ 69 (82)
T PF03120_consen 45 IKELDIRIGDTVLVTRAGDVIPKIV 69 (82)
T ss_dssp HHHTT-BBT-EEEEEEETTTEEEEE
T ss_pred HHHcCCCCCCEEEEEECCCccceEe
Confidence 45679999999998 7999999633
No 217
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=46.31 E-value=94 Score=34.23 Aligned_cols=63 Identities=19% Similarity=0.178 Sum_probs=38.9
Q ss_pred EEEecCHHHHHHHHHHHHh--CCCEEEEEcCCccC----HHHHHhCCccEEecCC-Cc--HHHHhccCEEec
Q 047874 639 VMARSSPLDKLLMVQSLKQ--KGHVVAVTGDGTND----APALRAADIGLSMGIQ-GT--EVAKESSDIVIM 701 (941)
Q Consensus 639 v~~~~~p~~K~~iv~~l~~--~g~~v~~iGDg~ND----~~~l~~A~vgIam~~~-~~--~~a~~~ad~vl~ 701 (941)
.|.-|||..=.++++...- .|..|+.+|.+..= +.||...|..|.+--+ -. ...-..||+++.
T Consensus 192 ~~~PCTp~avi~LL~~~~i~l~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~T~nl~~~~~~ADIvIs 263 (345)
T PLN02897 192 LFVSCTPKGCVELLIRSGVEIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFTKDPEQITRKADIVIA 263 (345)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCCCCCHHHHHhhCCEEEE
Confidence 4667788777777766543 38999999997542 3456555554444311 11 234467898876
No 218
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=45.93 E-value=19 Score=37.81 Aligned_cols=95 Identities=7% Similarity=-0.068 Sum_probs=51.7
Q ss_pred CcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCH
Q 047874 566 RPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSP 645 (941)
Q Consensus 566 ~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p 645 (941)
-++..++++.+++.|++. ++|+.....+.......|.. ..+ ..+...-.+......-+|
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g---------------~~~-----~~i~~~g~~~~~~gKP~~ 198 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAG---------------YYA-----ELIKQLGGKVIYSGKPYP 198 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEeccc---------------HHH-----HHHHHhCCcEecCCCCCH
Confidence 378889999999899997 77876654433222222211 000 000000011111223333
Q ss_pred HHHHHHHHHHHhC-CCEEEEEcCC-ccCHHHHHhCCcc
Q 047874 646 LDKLLMVQSLKQK-GHVVAVTGDG-TNDAPALRAADIG 681 (941)
Q Consensus 646 ~~K~~iv~~l~~~-g~~v~~iGDg-~ND~~~l~~A~vg 681 (941)
+-=....+.+... .+.++||||+ .+|..+=+.|++-
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~ 236 (242)
T TIGR01459 199 AIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGID 236 (242)
T ss_pred HHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCe
Confidence 3333444444322 3579999999 5999999988874
No 219
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=45.52 E-value=86 Score=33.63 Aligned_cols=72 Identities=14% Similarity=0.139 Sum_probs=41.8
Q ss_pred HHHhhcCceEEEecCHHHHHHHHHHHHh--CCCEEEEEcCCccC----HHHHHhCCccEEecCCCc-H--HHHhccCEEe
Q 047874 630 RIAKIESIRVMARSSPLDKLLMVQSLKQ--KGHVVAVTGDGTND----APALRAADIGLSMGIQGT-E--VAKESSDIVI 700 (941)
Q Consensus 630 ~~~~~~~~~v~~~~~p~~K~~iv~~l~~--~g~~v~~iGDg~ND----~~~l~~A~vgIam~~~~~-~--~a~~~ad~vl 700 (941)
+.+......-|.-|||..=.++++...- .|..|+.+|-+..= +.||...|..|.+.-+.+ + ..-..||+++
T Consensus 128 ~g~l~~g~~~~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~~~~~~ADIvI 207 (284)
T PRK14177 128 FGKLSMGVETYLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLPSIVRQADIIV 207 (284)
T ss_pred HHHHHcCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEE
Confidence 3333333345667788777777666543 38899999987552 335555444444431222 2 2456789887
Q ss_pred c
Q 047874 701 M 701 (941)
Q Consensus 701 ~ 701 (941)
.
T Consensus 208 s 208 (284)
T PRK14177 208 G 208 (284)
T ss_pred E
Confidence 5
No 220
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=44.68 E-value=73 Score=34.20 Aligned_cols=62 Identities=18% Similarity=0.255 Sum_probs=38.1
Q ss_pred EEEecCHHHHHHHHHHHHh--CCCEEEEEcCCccC----HHHHHh----CCccEEecCCCcH--HHHhccCEEec
Q 047874 639 VMARSSPLDKLLMVQSLKQ--KGHVVAVTGDGTND----APALRA----ADIGLSMGIQGTE--VAKESSDIVIM 701 (941)
Q Consensus 639 v~~~~~p~~K~~iv~~l~~--~g~~v~~iGDg~ND----~~~l~~----A~vgIam~~~~~~--~a~~~ad~vl~ 701 (941)
-+.-|||..=.++++.++- .|..++.+|.+..= +.||.. |-|.++-. ...+ ..-..||+++.
T Consensus 136 ~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs-~T~~l~~~~k~ADIvV~ 209 (284)
T PRK14193 136 APLPCTPRGIVHLLRRYDVELAGAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHT-GTRDLAAHTRRADIIVA 209 (284)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCC-CCCCHHHHHHhCCEEEE
Confidence 3556788777777776653 38899999997652 334543 44455443 2222 23467898876
No 221
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=44.54 E-value=57 Score=35.10 Aligned_cols=63 Identities=13% Similarity=0.241 Sum_probs=38.0
Q ss_pred EEEecCHHHHHHHHHHHH--hCCCEEEEEcCCcc----CHHHHHh--CCccEEecCCCcH--HHHhccCEEecc
Q 047874 639 VMARSSPLDKLLMVQSLK--QKGHVVAVTGDGTN----DAPALRA--ADIGLSMGIQGTE--VAKESSDIVIMD 702 (941)
Q Consensus 639 v~~~~~p~~K~~iv~~l~--~~g~~v~~iGDg~N----D~~~l~~--A~vgIam~~~~~~--~a~~~ad~vl~~ 702 (941)
-|.-|||..=.++++... -.|..|+.+|-|.. =+.+|.. |.|-++-. ...+ .....||+++..
T Consensus 136 ~~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s-~t~~l~~~~~~ADIVIsA 208 (286)
T PRK14175 136 TFVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHS-RSKDMASYLKDADVIVSA 208 (286)
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeC-CchhHHHHHhhCCEEEEC
Confidence 456677777777776654 23899999999763 2334544 44444433 2222 244678888763
No 222
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=43.55 E-value=2.3e+02 Score=30.49 Aligned_cols=170 Identities=18% Similarity=0.182 Sum_probs=88.3
Q ss_pred CHHHHHHHHHHHHHHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCcc--hHHHHHHHHhcCCeEEE
Q 047874 508 DGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPG--VRAAVESCRNAGVNVKM 585 (941)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~--~~~~I~~l~~aGi~v~i 585 (941)
.++.++++.+.++++..+|.+. . ++.+...|.+... ++..++.|++.||++.+
T Consensus 12 a~~i~~~lk~~i~~l~~~g~~p-~------------------------Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~ 66 (285)
T PRK14189 12 SKQLRAEAAQRAAALTARGHQP-G------------------------LAVILVGDNPASQVYVRNKVKACEDNGFHSLK 66 (285)
T ss_pred HHHHHHHHHHHHHHHHhCCCCC-e------------------------EEEEEeCCCchHHHHHHHHHHHHHHcCCEEEE
Confidence 4556677777777777666543 2 2333334433332 56677888888888655
Q ss_pred Ec--CC-CHHHHHHHHHHcCCCCCCC------CCCcc-------cceecchhcccCCHHHHHHhhcCceEEEecCHHHHH
Q 047874 586 VT--GD-NVHTARAIAIECGILNPDV------DLNKD-------EAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKL 649 (941)
Q Consensus 586 ~T--Gd-~~~~a~~ia~~~gi~~~~~------~~~~~-------~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 649 (941)
.- .+ ........-++++-+..-. +++.+ ..+---++.+.++.....+....-..|.-|||..=.
T Consensus 67 ~~l~~~~~~~~l~~~I~~lN~d~~V~GIlvq~Plp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~aii 146 (285)
T PRK14189 67 DRYPADLSEAELLARIDELNRDPKIHGILVQLPLPKHIDSHKVIEAIAPEKDVDGFHVANAGALMTGQPLFRPCTPYGVM 146 (285)
T ss_pred EECCCCCCHHHHHHHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhhHhhCCCCCCcCCCHHHHH
Confidence 43 22 2333444445554332100 00000 001111222333333333333333456677887777
Q ss_pred HHHHHHHh--CCCEEEEEcCCcc-C---HHHHHhCCccEEecCCCc-H--HHHhccCEEecc
Q 047874 650 LMVQSLKQ--KGHVVAVTGDGTN-D---APALRAADIGLSMGIQGT-E--VAKESSDIVIMD 702 (941)
Q Consensus 650 ~iv~~l~~--~g~~v~~iGDg~N-D---~~~l~~A~vgIam~~~~~-~--~a~~~ad~vl~~ 702 (941)
++++.++- .|..|+.+|.|.. = +.+|...|..|.+.-..+ + .....||+++.-
T Consensus 147 ~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~~~~ADIVV~a 208 (285)
T PRK14189 147 KMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAHTRQADIVVAA 208 (285)
T ss_pred HHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHHhhhCCEEEEc
Confidence 77766542 3889999999866 2 335555555554331222 2 345779998763
No 223
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=43.42 E-value=25 Score=32.15 Aligned_cols=82 Identities=16% Similarity=0.156 Sum_probs=46.5
Q ss_pred HHHHHHHhcccceeeeeeecccccccc---chhh-hhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCe-EEEEcCCCH
Q 047874 517 KIIQEMAAKSLRCIAFAHTKAAEADGQ---VQEK-LEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVN-VKMVTGDNV 591 (941)
Q Consensus 517 ~~~~~~~~~g~r~l~~a~~~~~~~~~~---~~~~-~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~-v~i~TGd~~ 591 (941)
...+.+.+.|+++..+..+.-+-.... .-.+ ...-|+..+. -+.+.+.+.++++.+.|++ +|+.+|...
T Consensus 18 ~v~~~l~~~G~~v~~Vnp~~~~i~G~~~y~sl~e~p~~iDlavv~------~~~~~~~~~v~~~~~~g~~~v~~~~g~~~ 91 (116)
T PF13380_consen 18 RVLRNLKAAGYEVYPVNPKGGEILGIKCYPSLAEIPEPIDLAVVC------VPPDKVPEIVDEAAALGVKAVWLQPGAES 91 (116)
T ss_dssp HHHHHHHHTT-EEEEESTTCSEETTEE-BSSGGGCSST-SEEEE-------S-HHHHHHHHHHHHHHT-SEEEE-TTS--
T ss_pred HHHHHHHhCCCEEEEECCCceEECcEEeeccccCCCCCCCEEEEE------cCHHHHHHHHHHHHHcCCCEEEEEcchHH
Confidence 345556668888777754431100000 0011 1123333333 2467899999999999997 999999999
Q ss_pred HHHHHHHHHcCCC
Q 047874 592 HTARAIAIECGIL 604 (941)
Q Consensus 592 ~~a~~ia~~~gi~ 604 (941)
..+...|++.|+.
T Consensus 92 ~~~~~~a~~~gi~ 104 (116)
T PF13380_consen 92 EELIEAAREAGIR 104 (116)
T ss_dssp HHHHHHHHHTT-E
T ss_pred HHHHHHHHHcCCE
Confidence 9999999998874
No 224
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=43.06 E-value=92 Score=33.59 Aligned_cols=63 Identities=14% Similarity=0.193 Sum_probs=37.9
Q ss_pred EEEecCHHHHHHHHHHHHh--CCCEEEEEcCCccC----HHHHHhCCccEEecC-CCcH--HHHhccCEEec
Q 047874 639 VMARSSPLDKLLMVQSLKQ--KGHVVAVTGDGTND----APALRAADIGLSMGI-QGTE--VAKESSDIVIM 701 (941)
Q Consensus 639 v~~~~~p~~K~~iv~~l~~--~g~~v~~iGDg~ND----~~~l~~A~vgIam~~-~~~~--~a~~~ad~vl~ 701 (941)
-|.-|||..=.++++...- .|..|+.+|.+..= +.||...|..|.+-- ...+ ..-..||+++.
T Consensus 138 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l~~~~~~ADIvVs 209 (294)
T PRK14187 138 CLIPCTPKGCLYLIKTITRNLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDLADYCSKADILVA 209 (294)
T ss_pred CccCcCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCHHHHHhhCCEEEE
Confidence 4667788877777776542 38899999987552 335554444443321 1222 23467888875
No 225
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=42.15 E-value=45 Score=34.82 Aligned_cols=48 Identities=21% Similarity=0.225 Sum_probs=36.7
Q ss_pred EEEeccCCCCcchHHHHHHHHhcCCeEEEEc---CCCHHHHHHHHHH-cCCC
Q 047874 557 GLVGLKDPCRPGVRAAVESCRNAGVNVKMVT---GDNVHTARAIAIE-CGIL 604 (941)
Q Consensus 557 G~i~~~d~~~~~~~~~I~~l~~aGi~v~i~T---Gd~~~~a~~ia~~-~gi~ 604 (941)
|++.-.+.+=+++.++|+.++++|++++++| |++.........+ .|+.
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~ 58 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVD 58 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCC
Confidence 4455556677899999999999999999998 6776665554455 6764
No 226
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=41.50 E-value=1.7e+02 Score=37.17 Aligned_cols=38 Identities=8% Similarity=0.138 Sum_probs=31.1
Q ss_pred CCcchHHHHHHHHhc-CCeEEEEcCCCHHHHHHHHHHcC
Q 047874 565 CRPGVRAAVESCRNA-GVNVKMVTGDNVHTARAIAIECG 602 (941)
Q Consensus 565 ~~~~~~~~I~~l~~a-Gi~v~i~TGd~~~~a~~ia~~~g 602 (941)
+.+++.++++.|.+. +-.|+++|||+..........++
T Consensus 623 p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~ 661 (934)
T PLN03064 623 LHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFD 661 (934)
T ss_pred CCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCC
Confidence 447788999999875 77899999999999888776544
No 227
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=40.24 E-value=85 Score=33.59 Aligned_cols=71 Identities=17% Similarity=0.271 Sum_probs=42.5
Q ss_pred HHHhhcCceEEEecCHHHHHHHHHHHHh--CCCEEEEEcCCcc-CHH---HHHhCC--ccEEecCCCcH--HHHhccCEE
Q 047874 630 RIAKIESIRVMARSSPLDKLLMVQSLKQ--KGHVVAVTGDGTN-DAP---ALRAAD--IGLSMGIQGTE--VAKESSDIV 699 (941)
Q Consensus 630 ~~~~~~~~~v~~~~~p~~K~~iv~~l~~--~g~~v~~iGDg~N-D~~---~l~~A~--vgIam~~~~~~--~a~~~ad~v 699 (941)
+.+......-|.-|||..=.++++...- .|..|+.+|.|.. =-| +|...+ |-++.. ...+ ..-..||++
T Consensus 121 ~g~l~~~~~~~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs-~t~~L~~~~~~ADIv 199 (279)
T PRK14178 121 LGRLVSGLPGFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHS-KTENLKAELRQADIL 199 (279)
T ss_pred HHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEec-ChhHHHHHHhhCCEE
Confidence 3333333334667788777777776643 3899999999844 344 565544 444443 2222 244678998
Q ss_pred ec
Q 047874 700 IM 701 (941)
Q Consensus 700 l~ 701 (941)
+.
T Consensus 200 I~ 201 (279)
T PRK14178 200 VS 201 (279)
T ss_pred EE
Confidence 86
No 228
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=39.53 E-value=86 Score=33.68 Aligned_cols=64 Identities=13% Similarity=0.159 Sum_probs=39.3
Q ss_pred EEEecCHHHHHHHHHHHHh--CCCEEEEEcCCccC----HHHHHhCCccEEecCCCcH---HHHhccCEEecc
Q 047874 639 VMARSSPLDKLLMVQSLKQ--KGHVVAVTGDGTND----APALRAADIGLSMGIQGTE---VAKESSDIVIMD 702 (941)
Q Consensus 639 v~~~~~p~~K~~iv~~l~~--~g~~v~~iGDg~ND----~~~l~~A~vgIam~~~~~~---~a~~~ad~vl~~ 702 (941)
.|.-|||..=.++++...- .|..|+.+|.|..= +.||...+..|.+.-+.+. ..-..||+++..
T Consensus 137 ~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvi~a 209 (285)
T PRK10792 137 LLRPCTPRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNLRHHVRNADLLVVA 209 (285)
T ss_pred CCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCHHHHHhhCCEEEEc
Confidence 4566788777777776643 38999999998642 2345554444444212222 244678998763
No 229
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=39.39 E-value=1.6e+02 Score=27.83 Aligned_cols=82 Identities=17% Similarity=0.208 Sum_probs=57.7
Q ss_pred HHHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCC-e-EEEEcCCC------H
Q 047874 520 QEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGV-N-VKMVTGDN------V 591 (941)
Q Consensus 520 ~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi-~-v~i~TGd~------~ 591 (941)
.-+..+|++|+.++...-.+ +..+...+.+-.++|+-...-...+.+++.++.|+++|. + .+++-|.. +
T Consensus 25 ~~lr~~G~eVi~LG~~vp~e---~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~~~~~~i~vGG~~~~~~~~~ 101 (137)
T PRK02261 25 RALTEAGFEVINLGVMTSQE---EFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEAGLGDILLYVGGNLVVGKHDF 101 (137)
T ss_pred HHHHHCCCEEEECCCCCCHH---HHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcCCCCCeEEEECCCCCCccCh
Confidence 45567999999887632111 112333466778999999989999999999999999965 2 35555554 4
Q ss_pred HHHHHHHHHcCCC
Q 047874 592 HTARAIAIECGIL 604 (941)
Q Consensus 592 ~~a~~ia~~~gi~ 604 (941)
......++++|+.
T Consensus 102 ~~~~~~l~~~G~~ 114 (137)
T PRK02261 102 EEVEKKFKEMGFD 114 (137)
T ss_pred HHHHHHHHHcCCC
Confidence 5556788889965
No 230
>PRK11507 ribosome-associated protein; Provisional
Probab=39.11 E-value=34 Score=28.00 Aligned_cols=26 Identities=23% Similarity=0.303 Sum_probs=22.7
Q ss_pred EEEECCEEeeeecCCcccCcEEEEcC
Q 047874 140 EVVRDGRRRGLSIFDVVVGEVVCLKT 165 (941)
Q Consensus 140 ~V~R~g~~~~i~~~~Lv~GDiI~l~~ 165 (941)
.|..||+.+.-.-+.|.|||+|.+..
T Consensus 38 ~V~VNGeve~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 38 QVKVDGAVETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred ceEECCEEecccCCCCCCCCEEEECC
Confidence 57789999888899999999999854
No 231
>PF13275 S4_2: S4 domain; PDB: 1P9K_A.
Probab=38.38 E-value=20 Score=28.99 Aligned_cols=27 Identities=26% Similarity=0.289 Sum_probs=14.7
Q ss_pred EEEECCEEeeeecCCcccCcEEEEcCCC
Q 047874 140 EVVRDGRRRGLSIFDVVVGEVVCLKTGD 167 (941)
Q Consensus 140 ~V~R~g~~~~i~~~~Lv~GDiI~l~~G~ 167 (941)
.|..||+.+.-.-..|.+||+|.+ .|+
T Consensus 34 ~V~VNGe~e~rrg~Kl~~GD~V~~-~~~ 60 (65)
T PF13275_consen 34 EVKVNGEVETRRGKKLRPGDVVEI-DGE 60 (65)
T ss_dssp HHEETTB----SS----SSEEEEE-TTE
T ss_pred ceEECCEEccccCCcCCCCCEEEE-CCE
Confidence 366788888888889999999999 443
No 232
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=38.35 E-value=1.1e+02 Score=34.05 Aligned_cols=63 Identities=19% Similarity=0.274 Sum_probs=37.2
Q ss_pred EEEecCHHHHHHHHHHHHh--CCCEEEEEcCCccC----HHHHHhCC--ccEEecCCC-cHHHHhccCEEec
Q 047874 639 VMARSSPLDKLLMVQSLKQ--KGHVVAVTGDGTND----APALRAAD--IGLSMGIQG-TEVAKESSDIVIM 701 (941)
Q Consensus 639 v~~~~~p~~K~~iv~~l~~--~g~~v~~iGDg~ND----~~~l~~A~--vgIam~~~~-~~~a~~~ad~vl~ 701 (941)
-|.-|||..=.++++...- .|..|+.+|.+.-= +.||...| |.++-.... ....-..||+++.
T Consensus 209 ~f~PCTp~avielL~~y~i~l~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~T~nl~~~~r~ADIVIs 280 (364)
T PLN02616 209 LFVPCTPKGCIELLHRYNVEIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITREADIIIS 280 (364)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCCCCCHHHHHhhCCEEEE
Confidence 4667788776666665542 38899999987542 33555444 444443111 1123467888875
No 233
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=38.18 E-value=1.1e+02 Score=32.89 Aligned_cols=63 Identities=22% Similarity=0.296 Sum_probs=37.5
Q ss_pred EEEecCHHHHHHHHHHHHh--CCCEEEEEcCCccC----HHHHHhC--CccEEecCCCcH--HHHhccCEEecc
Q 047874 639 VMARSSPLDKLLMVQSLKQ--KGHVVAVTGDGTND----APALRAA--DIGLSMGIQGTE--VAKESSDIVIMD 702 (941)
Q Consensus 639 v~~~~~p~~K~~iv~~l~~--~g~~v~~iGDg~ND----~~~l~~A--~vgIam~~~~~~--~a~~~ad~vl~~ 702 (941)
-|.-|||..=.++++.++- .|..|+.+|.|..= +.||... .|-++-. ...+ ..-..||+++.-
T Consensus 135 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs-~T~~l~~~~~~ADIvV~A 207 (281)
T PRK14183 135 GFVPCTPLGVMELLEEYEIDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHI-FTKDLKAHTKKADIVIVG 207 (281)
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCC-CCcCHHHHHhhCCEEEEe
Confidence 3556777776666666542 38899999998441 3355544 4444433 1222 234678988763
No 234
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=37.39 E-value=79 Score=25.86 Aligned_cols=32 Identities=34% Similarity=0.321 Sum_probs=24.4
Q ss_pred CCeEEEEECCEEeeeec---CCcccCcEEEEcCCC
Q 047874 136 DIRVEVVRDGRRRGLSI---FDVVVGEVVCLKTGD 167 (941)
Q Consensus 136 ~~~~~V~R~g~~~~i~~---~~Lv~GDiI~l~~G~ 167 (941)
...++|-.+|..++++. .++.|||-|++..|.
T Consensus 16 ~~~A~v~~~G~~~~V~~~lv~~v~~Gd~VLVHaG~ 50 (68)
T PF01455_consen 16 GGMAVVDFGGVRREVSLALVPDVKVGDYVLVHAGF 50 (68)
T ss_dssp TTEEEEEETTEEEEEEGTTCTSB-TT-EEEEETTE
T ss_pred CCEEEEEcCCcEEEEEEEEeCCCCCCCEEEEecCh
Confidence 45678888999988874 478899999999994
No 235
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=36.55 E-value=95 Score=29.17 Aligned_cols=83 Identities=14% Similarity=0.096 Sum_probs=57.6
Q ss_pred HHHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCC-eE-EEEcCCCHHHHHHH
Q 047874 520 QEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGV-NV-KMVTGDNVHTARAI 597 (941)
Q Consensus 520 ~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi-~v-~i~TGd~~~~a~~i 597 (941)
.-+...|++|+-.....-++ .--+...+.+-..+|+-++...-.+..++.++.|+++|. ++ +++-|-.+..-..-
T Consensus 24 ~~l~~~GfeVi~lg~~~s~e---~~v~aa~e~~adii~iSsl~~~~~~~~~~~~~~L~~~g~~~i~vivGG~~~~~~~~~ 100 (132)
T TIGR00640 24 TAYADLGFDVDVGPLFQTPE---EIARQAVEADVHVVGVSSLAGGHLTLVPALRKELDKLGRPDILVVVGGVIPPQDFDE 100 (132)
T ss_pred HHHHhCCcEEEECCCCCCHH---HHHHHHHHcCCCEEEEcCchhhhHHHHHHHHHHHHhcCCCCCEEEEeCCCChHhHHH
Confidence 45677888888766432111 111334467888999999999999999999999999987 44 44444455544666
Q ss_pred HHHcCCCC
Q 047874 598 AIECGILN 605 (941)
Q Consensus 598 a~~~gi~~ 605 (941)
.+++|+..
T Consensus 101 l~~~Gvd~ 108 (132)
T TIGR00640 101 LKEMGVAE 108 (132)
T ss_pred HHHCCCCE
Confidence 88889864
No 236
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=35.70 E-value=75 Score=28.96 Aligned_cols=82 Identities=18% Similarity=0.277 Sum_probs=57.8
Q ss_pred HHHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCC-e-EEEEcCCCHHHHHHH
Q 047874 520 QEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGV-N-VKMVTGDNVHTARAI 597 (941)
Q Consensus 520 ~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi-~-v~i~TGd~~~~a~~i 597 (941)
.-+...|++|+.+... .+.+ ...+...+.+-.++|+-...++--+.+++.++.+|+.+- + .+++-|.....-...
T Consensus 21 ~~l~~~G~~V~~lg~~-~~~~--~l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~~~~~~~~ 97 (119)
T cd02067 21 RALRDAGFEVIDLGVD-VPPE--EIVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAGLDDIPVLVGGAIVTRDFKF 97 (119)
T ss_pred HHHHHCCCEEEECCCC-CCHH--HHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHcCCCCCeEEEECCCCChhHHH
Confidence 4456789999766532 2221 112333466778999988888888999999999999976 4 467777766554568
Q ss_pred HHHcCCC
Q 047874 598 AIECGIL 604 (941)
Q Consensus 598 a~~~gi~ 604 (941)
+++.|.+
T Consensus 98 ~~~~G~D 104 (119)
T cd02067 98 LKEIGVD 104 (119)
T ss_pred HHHcCCe
Confidence 8888875
No 237
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=35.19 E-value=1.2e+02 Score=26.93 Aligned_cols=29 Identities=14% Similarity=0.261 Sum_probs=14.6
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHhhhccc
Q 047874 863 HKNKLFLAIIGITIALQLVMVEFLKTFAD 891 (941)
Q Consensus 863 ~~n~~~~~~~~~~~~~~~~~~~~~~~~f~ 891 (941)
+++..++..++.+++..+++-.+++.+++
T Consensus 39 ~~~l~~~g~IG~~~v~pil~G~~lG~WLD 67 (100)
T TIGR02230 39 WEGLGMFGLIGWSVAIPTLLGVAVGIWLD 67 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555555555555554444455544
No 238
>TIGR00216 ispH_lytB (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming). Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response.
Probab=34.99 E-value=6e+02 Score=27.30 Aligned_cols=167 Identities=13% Similarity=0.123 Sum_probs=93.7
Q ss_pred ecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccch-----------hhhhc-
Q 047874 483 WKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQ-----------EKLEE- 550 (941)
Q Consensus 483 ~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~-----------~~~~e- 550 (941)
.-|.+..+.+..... +-....-+-..-.+.+....++.++||.++.++.+.-++-..-.. .+..+
T Consensus 73 AHGv~~~~~~~~~~~---gl~viDaTCP~V~kv~~~v~~~~~~Gy~iiiiG~~~HpEv~gi~g~~~~~~~vv~~~~d~~~ 149 (280)
T TIGR00216 73 AHGVPPEVREELEKK---GLEVIDATCPLVTKVHNAVKKYAKEGYHVILIGKKNHPEVIGTRGYAPDKAIVVETLEDLEN 149 (280)
T ss_pred CCCCCHHHHHHHHHC---CCeEEeCCCcccHHHHHHHHHHHhCCCEEEEEeCCCCCeeeeeccCcCCCEEEECCHHHHHh
Confidence 347777776654321 112233333345678888999999999999998765432111000 00000
Q ss_pred -cCcEEEEEEeccCCCCcchHHHHHHHHhcC----C----eEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchh
Q 047874 551 -TGLTLLGLVGLKDPCRPGVRAAVESCRNAG----V----NVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQ 621 (941)
Q Consensus 551 -~~l~~lG~i~~~d~~~~~~~~~I~~l~~aG----i----~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~ 621 (941)
....-+|++.---...++..+.++.|++.. + .++..|-+....+..+|+++.+.
T Consensus 150 l~~~~~v~vvsQTT~~~~~~~~i~~~l~~~~~~~~~~~~nTIC~AT~~RQ~a~~~la~~vD~m----------------- 212 (280)
T TIGR00216 150 FKVEDLLGVVSQTTLSQEDTKEIVAELKARVPQKEVPVFNTICYATQNRQDAVKELAPEVDLM----------------- 212 (280)
T ss_pred CCCCCcEEEEEcCCCcHHHHHHHHHHHHHhCCCcCCCCCCCcccccHHHHHHHHHHHhhCCEE-----------------
Confidence 001225555555555566666666666654 1 14555666666666666654432
Q ss_pred cccCCHHHHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCc-cCHHHHHhC-CccEEec
Q 047874 622 FRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGT-NDAPALRAA-DIGLSMG 685 (941)
Q Consensus 622 ~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~-ND~~~l~~A-~vgIam~ 685 (941)
.|...-+..+-.++.+..++.|..+..+.+.. -|...|+.+ .|||.-|
T Consensus 213 ----------------iVVGg~nSsNT~rL~ei~~~~~~~t~~Ie~~~el~~~~l~~~~~VGiTAG 262 (280)
T TIGR00216 213 ----------------IVIGGKNSSNTTRLYEIAEEHGPPSYLIETAEELPEEWLKGVKVVGITAG 262 (280)
T ss_pred ----------------EEECCCCCchHHHHHHHHHHhCCCEEEECChHHCCHHHhCCCCEEEEEec
Confidence 14444444555666777777777788877643 266777765 4577766
No 239
>PF15584 Imm44: Immunity protein 44
Probab=34.70 E-value=17 Score=31.08 Aligned_cols=19 Identities=37% Similarity=0.739 Sum_probs=15.9
Q ss_pred cCcEEEEcCCCeeecceEE
Q 047874 157 VGEVVCLKTGDQIPADGLF 175 (941)
Q Consensus 157 ~GDiI~l~~G~~iPaD~~l 175 (941)
+.+-..|+.|++|||||+=
T Consensus 13 ~~~~~~I~SG~~iP~~GIw 31 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIW 31 (94)
T ss_pred CCCCCEEecCCCcccCCeE
Confidence 4566788999999999986
No 240
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=34.45 E-value=3e+02 Score=29.33 Aligned_cols=100 Identities=12% Similarity=0.219 Sum_probs=52.4
Q ss_pred ccCCCCcchHHHHHHHHhcCCe-EEEEcCCC-HHHHHHHHHHcC-CCCCCCCCCcccceecchhcccCCHHHHHHhhcCc
Q 047874 561 LKDPCRPGVRAAVESCRNAGVN-VKMVTGDN-VHTARAIAIECG-ILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESI 637 (941)
Q Consensus 561 ~~d~~~~~~~~~I~~l~~aGi~-v~i~TGd~-~~~a~~ia~~~g-i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 637 (941)
+-|-+-++..+.++.+++.|+. +.++|-.. .+..+.+++... ..- +- ...-.+|..
T Consensus 125 ipDLP~ee~~~~~~~~~~~gi~~I~lv~PtT~~eri~~i~~~a~gFIY----~v-S~~GvTG~~---------------- 183 (263)
T CHL00200 125 IPDLPYEESDYLISVCNLYNIELILLIAPTSSKSRIQKIARAAPGCIY----LV-STTGVTGLK---------------- 183 (263)
T ss_pred ecCCCHHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHhCCCcEE----EE-cCCCCCCCC----------------
Confidence 3444446677777777777776 44555544 345556666553 221 00 001111111
Q ss_pred eEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHH---HHHhCCc-cEEec
Q 047874 638 RVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAP---ALRAADI-GLSMG 685 (941)
Q Consensus 638 ~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~---~l~~A~v-gIam~ 685 (941)
..-+++-.+.++.+++....-+++|=|.|+.. .+..++. |+-+|
T Consensus 184 ----~~~~~~~~~~i~~ir~~t~~Pi~vGFGI~~~e~~~~~~~~GADGvVVG 231 (263)
T CHL00200 184 ----TELDKKLKKLIETIKKMTNKPIILGFGISTSEQIKQIKGWNINGIVIG 231 (263)
T ss_pred ----ccccHHHHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHhcCCCEEEEC
Confidence 01234556777777776555677899999554 3443433 55555
No 241
>PLN02591 tryptophan synthase
Probab=34.40 E-value=3.1e+02 Score=28.92 Aligned_cols=103 Identities=20% Similarity=0.201 Sum_probs=57.0
Q ss_pred EEEeccCCCCcchHHHHHHHHhcCCeE-EEEcCCC-HHHHHHHHHHc-CCCCCCCCCCcccceecchhcccCCHHHHHHh
Q 047874 557 GLVGLKDPCRPGVRAAVESCRNAGVNV-KMVTGDN-VHTARAIAIEC-GILNPDVDLNKDEAVIEGVQFRSLSAEERIAK 633 (941)
Q Consensus 557 G~i~~~d~~~~~~~~~I~~l~~aGi~v-~i~TGd~-~~~a~~ia~~~-gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 633 (941)
|++.-.- +-++..+..+.+++.|+.. .++|-.. .+..+.+++.. |... +- ...-++|..
T Consensus 109 GviipDL-P~ee~~~~~~~~~~~gl~~I~lv~Ptt~~~ri~~ia~~~~gFIY----~V-s~~GvTG~~------------ 170 (250)
T PLN02591 109 GLVVPDL-PLEETEALRAEAAKNGIELVLLTTPTTPTERMKAIAEASEGFVY----LV-SSTGVTGAR------------ 170 (250)
T ss_pred EEEeCCC-CHHHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHhCCCcEE----Ee-eCCCCcCCC------------
Confidence 4444433 3377788888888888874 4444554 34567777664 2210 00 000011110
Q ss_pred hcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCcc---CHHHHHhC-CccEEec
Q 047874 634 IESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTN---DAPALRAA-DIGLSMG 685 (941)
Q Consensus 634 ~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~N---D~~~l~~A-~vgIam~ 685 (941)
...|.+-.+.++.+++....-+++|=|.+ |+..+... -=|+-+|
T Consensus 171 --------~~~~~~~~~~i~~vk~~~~~Pv~vGFGI~~~e~v~~~~~~GADGvIVG 218 (250)
T PLN02591 171 --------ASVSGRVESLLQELKEVTDKPVAVGFGISKPEHAKQIAGWGADGVIVG 218 (250)
T ss_pred --------cCCchhHHHHHHHHHhcCCCceEEeCCCCCHHHHHHHHhcCCCEEEEC
Confidence 01255566778888887667778899998 45555444 2255555
No 242
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=34.28 E-value=7.6e+02 Score=29.82 Aligned_cols=22 Identities=27% Similarity=0.522 Sum_probs=11.6
Q ss_pred cccccc-cCccc-HHHHHHHHHHH
Q 047874 855 KKNIFK-GIHKN-KLFLAIIGITI 876 (941)
Q Consensus 855 ~~~~~~-~~~~n-~~~~~~~~~~~ 876 (941)
+.|++. .++++ +.|...+++++
T Consensus 297 ~~Pl~P~~Lf~~~r~~~~~lvi~f 320 (599)
T PF06609_consen 297 KDPLFPHRLFKDRRGFAALLVISF 320 (599)
T ss_pred CCCcCCHHHhccchHHHHHHHHHH
Confidence 356665 66665 44544444433
No 243
>PF02401 LYTB: LytB protein; InterPro: IPR003451 Terpenes are among the largest groups of natural products and include compounds such as vitamins, cholesterol and carotenoids. The biosynthesis of all terpenoids begins with one or both of the two C5 precursors of the pathway: isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). In animals, fungi, and certain bacteria, the synthesis of IPP and DMAPP occurs via the well-known mevalonate pathway, however, a second, nonmevalonate terpenoid pathway has been identified in many eubacteria, algae and the chloroplasts of higher plants []. LytB(IspH) catalyses the conversion of 1-hydroy-2-methyl-2-(E)-butenyl 4-diphosphate into IPP and DMAPP in this second pathway The enzyme appears to be responsible for a branch-step in the nonmevalonate pathway, in that IPP and DMAPP are produced in parallel from a single precursor although the exact mechanism of this is not currently fully understood []. Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response [].; GO: 0019288 isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, 0055114 oxidation-reduction process; PDB: 3DNF_B 3SZL_B 3KE8_B 3KEF_B 3SZU_A 3KEL_A 3F7T_B 3KE9_B 3KEM_B 3T0G_A ....
Probab=34.22 E-value=1.7e+02 Score=31.49 Aligned_cols=167 Identities=15% Similarity=0.162 Sum_probs=82.9
Q ss_pred ecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccch----------------h
Q 047874 483 WKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQ----------------E 546 (941)
Q Consensus 483 ~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~----------------~ 546 (941)
.-|.+..+.+..... +-.....+-..-.++++..++++++||.++.++.+.-++-..-.. +
T Consensus 71 AHGv~~~~~~~l~~~---g~~viDaTCP~V~k~~~~v~~~~~~Gy~iviiG~~~HpEv~gi~g~~~~~~~~vv~~~~~~~ 147 (281)
T PF02401_consen 71 AHGVPPEVYEELKER---GLEVIDATCPFVKKIHKIVRKYAKEGYQIVIIGDKNHPEVIGILGYAPEEKAIVVESPEDVE 147 (281)
T ss_dssp TT---HHHHHHHHHT---TEEEEE---HHHHHHHHHHHHHHHCT-EEEEES-TT-HHHHHHHCCHHTS-EEEESSHHHHH
T ss_pred CCCCCHHHHHHHHHc---CCEEEECCChhHHHHHHHHHHHHhcCCEEEEECCCCCceEEEecccccCCceEEeCChhhhc
Confidence 347777777655421 112333444556778899999999999999998764332110000 0
Q ss_pred hhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEE--------EEcCCCHHHHHHHHHHcCCCCCCCCCCcccceec
Q 047874 547 KLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVK--------MVTGDNVHTARAIAIECGILNPDVDLNKDEAVIE 618 (941)
Q Consensus 547 ~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~--------i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~ 618 (941)
.....+..-++++.---...++..+.++.|++..-... ..|-+....+..+|+++.+
T Consensus 148 ~l~~~~~~kv~vvsQTT~~~~~~~~i~~~l~~~~~~~~~~~~nTIC~aT~~RQ~a~~~La~~vD~--------------- 212 (281)
T PF02401_consen 148 KLPISDPKKVAVVSQTTQSVEKFEEIVEALKKRFPELEGPVFNTICYATQNRQEAARELAKEVDA--------------- 212 (281)
T ss_dssp HGGGSSTTCEEEEE-TTS-HHHHHHHHHHHHHHSTCEE-SCC-S--CHHHHHHHHHHHHHCCSSE---------------
T ss_pred ccCCCCCCeEEEEEeecccHHHHHHHHHHHHHhCccccCCCCCCCCHhHHHHHHHHHHHHhhCCE---------------
Confidence 00011112344444444455555566666665544433 2222223333333333221
Q ss_pred chhcccCCHHHHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCc-cCHHHHHhC-CccEEec
Q 047874 619 GVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGT-NDAPALRAA-DIGLSMG 685 (941)
Q Consensus 619 g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~-ND~~~l~~A-~vgIam~ 685 (941)
..|...-+..+..++.+..++.+..+..|.+-. =|..+|+.+ .|||.-|
T Consensus 213 ------------------miVIGg~~SsNT~kL~eia~~~~~~t~~Ie~~~el~~~~l~~~~~VGItaG 263 (281)
T PF02401_consen 213 ------------------MIVIGGKNSSNTRKLAEIAKEHGKPTYHIETADELDPEWLKGVKKVGITAG 263 (281)
T ss_dssp ------------------EEEES-TT-HHHHHHHHHHHHCTTCEEEESSGGG--HHHHTT-SEEEEEE-
T ss_pred ------------------EEEecCCCCccHHHHHHHHHHhCCCEEEeCCccccCHhHhCCCCEEEEEcc
Confidence 124555556777788888888888888887632 134568777 7888887
No 244
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=34.15 E-value=66 Score=31.20 Aligned_cols=42 Identities=17% Similarity=0.052 Sum_probs=37.7
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILN 605 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~ 605 (941)
=.+||++.+.++.|++. ++++++|.-....|..+.+.++...
T Consensus 57 v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~ 98 (156)
T TIGR02250 57 TKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDG 98 (156)
T ss_pred EEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCC
Confidence 35799999999999955 9999999999999999999998763
No 245
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=33.00 E-value=1.2e+03 Score=30.43 Aligned_cols=36 Identities=17% Similarity=0.350 Sum_probs=28.2
Q ss_pred ccCcEEEEcCCCeeecceEEEe---cceEEEeeccCCCC
Q 047874 156 VVGEVVCLKTGDQIPADGLFLN---GHSLKVDESSMTGE 191 (941)
Q Consensus 156 v~GDiI~l~~G~~iPaD~~ll~---g~~l~Vdes~LTGE 191 (941)
+-|....+...|.+|-|.++++ |+.+-+|=-.+.|+
T Consensus 235 Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~ 273 (1054)
T TIGR01657 235 RNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS 273 (1054)
T ss_pred ECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc
Confidence 4588999999999999999997 55555565566663
No 246
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=32.91 E-value=1.1e+02 Score=32.91 Aligned_cols=44 Identities=11% Similarity=0.067 Sum_probs=30.1
Q ss_pred ecCHHHHHHHHHHHHhCCCEEEEEcCC-ccCHHHHHhCCcc-EEec
Q 047874 642 RSSPLDKLLMVQSLKQKGHVVAVTGDG-TNDAPALRAADIG-LSMG 685 (941)
Q Consensus 642 ~~~p~~K~~iv~~l~~~g~~v~~iGDg-~ND~~~l~~A~vg-Iam~ 685 (941)
.-+|+-=..+.+.+.-..+.++||||. ..|..+-+.|++- |.+.
T Consensus 202 KP~p~~~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si~V~ 247 (279)
T TIGR01452 202 KPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLVL 247 (279)
T ss_pred CCCHHHHHHHHHHhCCChhhEEEECCChHHHHHHHHHcCCcEEEEC
Confidence 344444344555554456789999999 4999999999885 4443
No 247
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=32.83 E-value=1.2e+03 Score=30.00 Aligned_cols=77 Identities=17% Similarity=0.210 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCEEeeeecCCcccCcEEEEcCCCeeecceEEEecce-EEE
Q 047874 105 IIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHS-LKV 183 (941)
Q Consensus 105 i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~g~~-l~V 183 (941)
-.+++++++++++.-.+.++++.++..+...+.... ...| ++-|....+...|.+|-|.++++... +-.
T Consensus 38 ~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~------~~~V----iRdg~~~~I~~~~Lv~GDiv~l~~Gd~IPa 107 (917)
T TIGR01116 38 EPFVILLILVANAIVGVWQERNAEKAIEALKEYESE------HAKV----LRDGRWSVIKAKDLVPGDIVELAVGDKVPA 107 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC------ceEE----EECCEEEEEEHHHCCCCCEEEECCCCEeec
Confidence 345555566666666666665555443333332111 1112 23488899999999999999997543 333
Q ss_pred eeccCCCC
Q 047874 184 DESSMTGE 191 (941)
Q Consensus 184 des~LTGE 191 (941)
|=-.+.|+
T Consensus 108 D~~ll~~~ 115 (917)
T TIGR01116 108 DIRVLSLK 115 (917)
T ss_pred cEEEEEec
Confidence 44444444
No 248
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=32.62 E-value=1.2e+02 Score=29.92 Aligned_cols=107 Identities=14% Similarity=0.145 Sum_probs=69.1
Q ss_pred chHHHHHHHHhcCCeEEEEcCCCHHH-HHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHH
Q 047874 568 GVRAAVESCRNAGVNVKMVTGDNVHT-ARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPL 646 (941)
Q Consensus 568 ~~~~~I~~l~~aGi~v~i~TGd~~~~-a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~ 646 (941)
|..+++.++++.|-++.+++=++... ...+.+-+|+.- ..+.-.+++
T Consensus 65 Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~i--------------------------------~~~~~~~~~ 112 (176)
T PF06506_consen 65 DILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVDI--------------------------------KIYPYDSEE 112 (176)
T ss_dssp HHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-EE--------------------------------EEEEESSHH
T ss_pred HHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCce--------------------------------EEEEECCHH
Confidence 56677777777777777777666553 666667676632 356667788
Q ss_pred HHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHH
Q 047874 647 DKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQK 724 (941)
Q Consensus 647 ~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~ 724 (941)
+=...++.+++.|. -+.+|++.- +..-+..| -..++...+..++..++.+++.+.+..++
T Consensus 113 e~~~~i~~~~~~G~-~viVGg~~~-~~~A~~~g----------------l~~v~i~sg~esi~~Al~eA~~i~~~~~~ 172 (176)
T PF06506_consen 113 EIEAAIKQAKAEGV-DVIVGGGVV-CRLARKLG----------------LPGVLIESGEESIRRALEEALRIARARRR 172 (176)
T ss_dssp HHHHHHHHHHHTT---EEEESHHH-HHHHHHTT----------------SEEEESS--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC-cEEECCHHH-HHHHHHcC----------------CcEEEEEecHHHHHHHHHHHHHHHHHHHH
Confidence 88899999999884 456677532 22223222 23455566789999999999999886654
No 249
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=32.33 E-value=6.6e+02 Score=32.35 Aligned_cols=35 Identities=17% Similarity=0.165 Sum_probs=23.9
Q ss_pred ccCcEEEEcCCCeeecceEEEec-ceEEEeeccCCC
Q 047874 156 VVGEVVCLKTGDQIPADGLFLNG-HSLKVDESSMTG 190 (941)
Q Consensus 156 v~GDiI~l~~G~~iPaD~~ll~g-~~l~Vdes~LTG 190 (941)
+-|-...+...|.+|-|.++++. +.+-+|=-.+.|
T Consensus 172 RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g 207 (941)
T TIGR01517 172 RGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISG 207 (941)
T ss_pred ECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEc
Confidence 34777888889999999998863 334444444555
No 250
>PRK01045 ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed
Probab=31.74 E-value=5.9e+02 Score=27.62 Aligned_cols=167 Identities=12% Similarity=0.149 Sum_probs=85.1
Q ss_pred ecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccch-----------hhhhc-
Q 047874 483 WKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQ-----------EKLEE- 550 (941)
Q Consensus 483 ~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~-----------~~~~e- 550 (941)
.-|.+..+.+.... ++-.....+-..-.+++..+.++.++||.++.++.+.-++-..-.. .+..+
T Consensus 73 AHGv~~~~~~~~~~---~g~~viDaTCP~V~k~~~~v~~~~~~Gy~vvi~G~~~HpEv~gi~g~~~~~~~vv~~~~e~~~ 149 (298)
T PRK01045 73 AHGVSPAVREEAKE---RGLTVIDATCPLVTKVHKEVARMSREGYEIILIGHKGHPEVEGTMGQAPGGVYLVESPEDVAK 149 (298)
T ss_pred CCCCCHHHHHHHHH---CCCeEEeCCCccchHHHHHHHHHHhCCCEEEEEeCCCCCeeeeeccCcCCCEEEEcCHHHHhh
Confidence 34777777665432 1112233333344678888999999999999998765332110000 00000
Q ss_pred ---cCcEEEEEEeccCCCCcchHHHHHHHHhcCCeE--------EEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecc
Q 047874 551 ---TGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNV--------KMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEG 619 (941)
Q Consensus 551 ---~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v--------~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g 619 (941)
.+..-++++.---..+++..+.++.+++..-.+ +..|-+....+..+|+++...
T Consensus 150 l~~~~~~~v~vvsQTT~~~~~~~~i~~~l~~~~~~~~v~~~nTIC~aT~~RQ~a~~~La~~vD~m--------------- 214 (298)
T PRK01045 150 LEVKDPDKLALVTQTTLSVDDTAEIIAALKERFPEIQGPPKDDICYATQNRQEAVKELAPQADLV--------------- 214 (298)
T ss_pred cccCCCCcEEEEEcCCCcHHHHHHHHHHHHHhCcCcccCCCCCcchhhHHHHHHHHHHHhhCCEE---------------
Confidence 111224444444444444555555554433221 223444444444444443321
Q ss_pred hhcccCCHHHHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCc-cCHHHHHh-CCccEEec
Q 047874 620 VQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGT-NDAPALRA-ADIGLSMG 685 (941)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~-ND~~~l~~-A~vgIam~ 685 (941)
.|...-+..+-.++.+..++.+..+..|.+-. -|...|+. ..|||.-|
T Consensus 215 ------------------iVVGg~~SsNT~kL~~i~~~~~~~t~~Ie~~~el~~~~l~~~~~VGitaG 264 (298)
T PRK01045 215 ------------------IVVGSKNSSNSNRLREVAEEAGAPAYLIDDASEIDPEWFKGVKTVGVTAG 264 (298)
T ss_pred ------------------EEECCCCCccHHHHHHHHHHHCCCEEEECChHHCcHHHhcCCCEEEEEec
Confidence 24444444555566676777777777776632 25556664 36788777
No 251
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=31.59 E-value=1e+02 Score=29.97 Aligned_cols=58 Identities=14% Similarity=0.223 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHH
Q 047874 513 TQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVH 592 (941)
Q Consensus 513 ~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~ 592 (941)
.-+..+++.+++.|--.++++.. - -.+++.++++.+++.|++++-+||++-.
T Consensus 97 ~vFsRqveA~g~~GDvLigISTS--------------------------G--NS~nVl~Ai~~Ak~~gm~vI~ltG~~GG 148 (176)
T COG0279 97 EVFSRQVEALGQPGDVLIGISTS--------------------------G--NSKNVLKAIEAAKEKGMTVIALTGKDGG 148 (176)
T ss_pred HHHHHHHHhcCCCCCEEEEEeCC--------------------------C--CCHHHHHHHHHHHHcCCEEEEEecCCCc
Confidence 44566677777777555555432 2 2468999999999999999999999876
Q ss_pred HHHHHH
Q 047874 593 TARAIA 598 (941)
Q Consensus 593 ~a~~ia 598 (941)
....++
T Consensus 149 ~~~~~~ 154 (176)
T COG0279 149 KLAGLL 154 (176)
T ss_pred cccccc
Confidence 655555
No 252
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=31.08 E-value=2.6e+02 Score=30.21 Aligned_cols=84 Identities=27% Similarity=0.381 Sum_probs=51.9
Q ss_pred cchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHH
Q 047874 567 PGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPL 646 (941)
Q Consensus 567 ~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~ 646 (941)
.|+..++.+. +..+++=+....+...+|+..+++. ++| ..-...|.
T Consensus 90 ~DTArVLsr~----~D~I~~R~~~~~~ve~lA~~s~VPV-----------iNg-------------------LtD~~HP~ 135 (310)
T COG0078 90 KDTARVLSRM----VDAIMIRGFSHETLEELAKYSGVPV-----------ING-------------------LTDEFHPC 135 (310)
T ss_pred HHHHHHHHhh----hheEEEecccHHHHHHHHHhCCCce-----------Ecc-------------------cccccCcH
Confidence 3455555554 6678888999999999999998863 111 11112466
Q ss_pred HHHHHHHHHHh-----CCCEEEEEcCCccCH--HHHHhCCccEEe
Q 047874 647 DKLLMVQSLKQ-----KGHVVAVTGDGTNDA--PALRAADIGLSM 684 (941)
Q Consensus 647 ~K~~iv~~l~~-----~g~~v~~iGDg~ND~--~~l~~A~vgIam 684 (941)
|-..=+-.+++ +|.+++++|||.|=+ -|+..|-.|+-+
T Consensus 136 Q~LADl~Ti~E~~g~l~g~k~a~vGDgNNv~nSl~~~~a~~G~dv 180 (310)
T COG0078 136 QALADLMTIKEHFGSLKGLKLAYVGDGNNVANSLLLAAAKLGMDV 180 (310)
T ss_pred HHHHHHHHHHHhcCcccCcEEEEEcCcchHHHHHHHHHHHhCCeE
Confidence 65544444444 367999999994432 345555445443
No 253
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=30.47 E-value=1.1e+02 Score=25.87 Aligned_cols=47 Identities=13% Similarity=0.147 Sum_probs=38.1
Q ss_pred EEeccCCCCcchHHHHHHHHhcCCeEEE-EcCCCHHHHHHHHHHcCCC
Q 047874 558 LVGLKDPCRPGVRAAVESCRNAGVNVKM-VTGDNVHTARAIAIECGIL 604 (941)
Q Consensus 558 ~i~~~d~~~~~~~~~I~~l~~aGi~v~i-~TGd~~~~a~~ia~~~gi~ 604 (941)
++.+.+...+.+.+..+.|+++|+++.+ ..+++...-...|++.|+.
T Consensus 6 ii~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~ 53 (91)
T cd00860 6 VIPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIP 53 (91)
T ss_pred EEeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCC
Confidence 3444566777888999999999999988 6778888888889999976
No 254
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=30.09 E-value=7.3e+02 Score=26.77 Aligned_cols=169 Identities=11% Similarity=0.096 Sum_probs=85.0
Q ss_pred CHHHHHHHHHHHHHHHhc-ccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCcc--hHHHHHHHHhcCCeEE
Q 047874 508 DGEERTQIEKIIQEMAAK-SLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPG--VRAAVESCRNAGVNVK 584 (941)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~-g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~--~~~~I~~l~~aGi~v~ 584 (941)
.++.++.+.+.++.+..+ |.+. . +..+...|.+... ++.-.+.|++.|+++.
T Consensus 17 A~~i~~~l~~~i~~l~~~~g~~P-~------------------------Laii~vg~d~aS~~Yv~~k~k~~~~~Gi~~~ 71 (287)
T PRK14176 17 AKKIEAEVRSGVERLKSNRGITP-G------------------------LATILVGDDPASKMYVRLKHKACERVGIRAE 71 (287)
T ss_pred HHHHHHHHHHHHHHHHhccCCCC-e------------------------EEEEEECCCcchHHHHHHHHHHHHHcCCEEE
Confidence 345566777777777655 5332 2 2334444444333 5667788888888765
Q ss_pred EEcC--C-CHHHHHHHHHHcCCCCCCC------CCCcc-------cceecchhcccCCHHHHHHhhcCceEEEecCHHHH
Q 047874 585 MVTG--D-NVHTARAIAIECGILNPDV------DLNKD-------EAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDK 648 (941)
Q Consensus 585 i~TG--d-~~~~a~~ia~~~gi~~~~~------~~~~~-------~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 648 (941)
...= + ..+.....-++++=+..-. +++.+ ..+--.++.+.++..........-.-|.-|||..=
T Consensus 72 ~~~l~~~~~~~el~~~I~~LN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~g~~~~~PcTp~av 151 (287)
T PRK14176 72 DQFLPADTTQEELLELIDSLNKRKDVHGILLQLPLPKHLDPQEAMEAIDPAKDADGFHPYNMGKLMIGDEGLVPCTPHGV 151 (287)
T ss_pred EEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCccccccccChhhhhhHhcCCCCCCCCcHHHH
Confidence 5433 2 2333444445554322100 00000 00111122233333333333333334667788877
Q ss_pred HHHHHHHHh--CCCEEEEEcCCccC----HHHHHhCCccEEecC-CCcH--HHHhccCEEec
Q 047874 649 LLMVQSLKQ--KGHVVAVTGDGTND----APALRAADIGLSMGI-QGTE--VAKESSDIVIM 701 (941)
Q Consensus 649 ~~iv~~l~~--~g~~v~~iGDg~ND----~~~l~~A~vgIam~~-~~~~--~a~~~ad~vl~ 701 (941)
.++++.++- .|..|+.+|-|..= +.+|...|..|.+.- ...+ ..-..||+++.
T Consensus 152 ~~ll~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvv~ 213 (287)
T PRK14176 152 IRALEEYGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDLKKYTLDADILVV 213 (287)
T ss_pred HHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCHHHHHhhCCEEEE
Confidence 777776643 48899999998642 334555444444331 2222 23467888874
No 255
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=29.40 E-value=87 Score=28.59 Aligned_cols=38 Identities=21% Similarity=0.269 Sum_probs=29.5
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCC
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGIL 604 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~ 604 (941)
-.+++.++++.+++.|++++.+|++.. ....+.+.|..
T Consensus 55 ~t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~~ 92 (119)
T cd05017 55 NTEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGVP 92 (119)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCCc
Confidence 356899999999999999999998874 34466655543
No 256
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=28.76 E-value=1.4e+03 Score=29.64 Aligned_cols=79 Identities=10% Similarity=0.151 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCEEeeeecCCcccCcEEEEcCCCeeecceEEEecc-eEE
Q 047874 104 SIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGH-SLK 182 (941)
Q Consensus 104 ~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~g~-~l~ 182 (941)
...++++++++++++..+.++++.++..+..+..... + ..| ++-|-...+...|.+|-|.++++.. .+-
T Consensus 105 ~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~-----~-~~V----iRdg~~~~I~~~~lv~GDiv~l~~Gd~IP 174 (997)
T TIGR01106 105 YLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQ-----Q-ALV----IRDGEKMSINAEQVVVGDLVEVKGGDRIP 174 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC-----e-eEE----EECCEEEEeeHHHCCCCCEEEECCCCEEe
Confidence 3445566677888888888887766665444432211 1 111 2457788999999999999999743 344
Q ss_pred EeeccCCCCC
Q 047874 183 VDESSMTGES 192 (941)
Q Consensus 183 Vdes~LTGEs 192 (941)
+|=-.+.|++
T Consensus 175 aD~~il~~~~ 184 (997)
T TIGR01106 175 ADLRIISAQG 184 (997)
T ss_pred eeEEEEEccC
Confidence 4555555554
No 257
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=28.74 E-value=27 Score=34.80 Aligned_cols=13 Identities=38% Similarity=0.376 Sum_probs=12.1
Q ss_pred EEeCcccccccCc
Q 047874 359 ICTDKTGTLTLNQ 371 (941)
Q Consensus 359 i~~DKTGTLT~~~ 371 (941)
+|||.+||||.+.
T Consensus 1 v~fD~DGTL~~~~ 13 (192)
T PF12710_consen 1 VIFDFDGTLTDSD 13 (192)
T ss_dssp EEEESBTTTBSSH
T ss_pred eEEecCcCeecCC
Confidence 6999999999987
No 258
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=28.17 E-value=1.3e+02 Score=31.27 Aligned_cols=98 Identities=16% Similarity=0.122 Sum_probs=59.0
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecC
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSS 644 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 644 (941)
+-++..+++++||++|..+.++|--.... ..+-..+|+.... +..+.++..-.. .-.
T Consensus 114 ~~~~~~~~lq~lR~~g~~l~iisN~d~r~-~~~l~~~~l~~~f-----D~vv~S~e~g~~-----------------KPD 170 (237)
T KOG3085|consen 114 YLDGMQELLQKLRKKGTILGIISNFDDRL-RLLLLPLGLSAYF-----DFVVESCEVGLE-----------------KPD 170 (237)
T ss_pred eccHHHHHHHHHHhCCeEEEEecCCcHHH-HHHhhccCHHHhh-----hhhhhhhhhccC-----------------CCC
Confidence 34566699999999998888888755443 3666666664210 111111111100 112
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCC-ccCHHHHHhCCc-cEEec
Q 047874 645 PLDKLLMVQSLKQKGHVVAVTGDG-TNDAPALRAADI-GLSMG 685 (941)
Q Consensus 645 p~~K~~iv~~l~~~g~~v~~iGDg-~ND~~~l~~A~v-gIam~ 685 (941)
|.-=...++.+.-+.+.|+.+||. .||...-+.+|. ++-+.
T Consensus 171 p~If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~ 213 (237)
T KOG3085|consen 171 PRIFQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVD 213 (237)
T ss_pred hHHHHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEc
Confidence 222234455555567889999995 899999888877 34444
No 259
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=28.11 E-value=1.3e+02 Score=28.08 Aligned_cols=82 Identities=15% Similarity=0.217 Sum_probs=56.2
Q ss_pred HHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCC-eEEEEcCCCH-------H
Q 047874 521 EMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGV-NVKMVTGDNV-------H 592 (941)
Q Consensus 521 ~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi-~v~i~TGd~~-------~ 592 (941)
.+...|+.|+-++...-++ .--+...+.+-.++|+-++--.--+..+++++.|+++|+ .+.++=|-.. .
T Consensus 22 ~L~~~GfeVidLG~~v~~e---~~v~aa~~~~adiVglS~L~t~~~~~~~~~~~~l~~~gl~~v~vivGG~~~i~~~d~~ 98 (128)
T cd02072 22 AFTEAGFNVVNLGVLSPQE---EFIDAAIETDADAILVSSLYGHGEIDCKGLREKCDEAGLKDILLYVGGNLVVGKQDFE 98 (128)
T ss_pred HHHHCCCEEEECCCCCCHH---HHHHHHHHcCCCEEEEeccccCCHHHHHHHHHHHHHCCCCCCeEEEECCCCCChhhhH
Confidence 4567899998777533211 111233466788999999998888999999999999998 5544444432 2
Q ss_pred HHHHHHHHcCCCC
Q 047874 593 TARAIAIECGILN 605 (941)
Q Consensus 593 ~a~~ia~~~gi~~ 605 (941)
....-.+++|+..
T Consensus 99 ~~~~~L~~~Gv~~ 111 (128)
T cd02072 99 DVEKRFKEMGFDR 111 (128)
T ss_pred HHHHHHHHcCCCE
Confidence 3346688888853
No 260
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=28.09 E-value=93 Score=33.55 Aligned_cols=62 Identities=15% Similarity=0.213 Sum_probs=38.5
Q ss_pred EEEecCHHHHHHHHHHHHh--CCCEEEEEcCCccC----HHHHHh------CCccEEecCCCcH--HHHhccCEEec
Q 047874 639 VMARSSPLDKLLMVQSLKQ--KGHVVAVTGDGTND----APALRA------ADIGLSMGIQGTE--VAKESSDIVIM 701 (941)
Q Consensus 639 v~~~~~p~~K~~iv~~l~~--~g~~v~~iGDg~ND----~~~l~~------A~vgIam~~~~~~--~a~~~ad~vl~ 701 (941)
-|.-|||..=.++++...- .|..|+.+|.+..= +.||.. |.|.++-. ...+ ..-..||+++.
T Consensus 135 ~~~PcTp~av~~lL~~~~i~l~GK~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs-~T~nl~~~~~~ADIvIs 210 (293)
T PRK14185 135 CFVSATPNGILELLKRYHIETSGKKCVVLGRSNIVGKPMAQLMMQKAYPGDCTVTVCHS-RSKNLKKECLEADIIIA 210 (293)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHcCCCCCCCEEEEecC-CCCCHHHHHhhCCEEEE
Confidence 4567788777777776643 38999999987552 335544 44555543 2222 23467888875
No 261
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=27.18 E-value=7.4e+02 Score=26.73 Aligned_cols=169 Identities=15% Similarity=0.163 Sum_probs=84.8
Q ss_pred CHHHHHHHHHHHHHHHhc-ccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCcc--hHHHHHHHHhcCCeEE
Q 047874 508 DGEERTQIEKIIQEMAAK-SLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPG--VRAAVESCRNAGVNVK 584 (941)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~-g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~--~~~~I~~l~~aGi~v~ 584 (941)
.++.++++.+.++++..+ |.+. . ++.+...|.+... ++.-++.+++.||.+.
T Consensus 11 A~~i~~~lk~~v~~l~~~~g~~P-~------------------------LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~ 65 (288)
T PRK14171 11 ANEILADLKLEIQELKSQTNASP-K------------------------LAIVLVGDNPASIIYVKNKIKNAHKIGIDTL 65 (288)
T ss_pred HHHHHHHHHHHHHHHHhccCCCC-e------------------------EEEEEeCCCccHHHHHHHHHHHHHHcCCEEE
Confidence 455667777777777665 5432 1 2333344443333 4467788888898865
Q ss_pred EEc--CC-CHHHHHHHHHHcCCCCCCC------CCCc---cc----ceecchhcccCCHHHHHHhhcCc-eEEEecCHHH
Q 047874 585 MVT--GD-NVHTARAIAIECGILNPDV------DLNK---DE----AVIEGVQFRSLSAEERIAKIESI-RVMARSSPLD 647 (941)
Q Consensus 585 i~T--Gd-~~~~a~~ia~~~gi~~~~~------~~~~---~~----~~~~g~~~~~~~~~~~~~~~~~~-~v~~~~~p~~ 647 (941)
..- .+ ..+.....-++++-+..-. +++. .. .+---++.+.++........... .-|.-|||..
T Consensus 66 ~~~l~~~~~~~~l~~~I~~LN~D~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~~N~g~l~~g~~~~~~PcTp~a 145 (288)
T PRK14171 66 LVNLSTTIHTNDLISKINELNLDNEISGIIVQLPLPSSIDKNKILSAVSPSKDIDGFHPLNVGYLHSGISQGFIPCTALG 145 (288)
T ss_pred EEECCCCCCHHHHHHHHHHHcCCCCCCEEEEeCCCCCCCCHHHHHhccCcccccccCCccchhhhhcCCCCCCcCCCHHH
Confidence 543 22 2333444455554332100 0000 00 00011122222222333333222 3467788887
Q ss_pred HHHHHHHHHh--CCCEEEEEcCCccC----HHHHHhCCccEEecC-CCcHH--HHhccCEEec
Q 047874 648 KLLMVQSLKQ--KGHVVAVTGDGTND----APALRAADIGLSMGI-QGTEV--AKESSDIVIM 701 (941)
Q Consensus 648 K~~iv~~l~~--~g~~v~~iGDg~ND----~~~l~~A~vgIam~~-~~~~~--a~~~ad~vl~ 701 (941)
=.++++..+- .|..|+.+|.+..= +.||...|..|.+.- ...+. .-..||+++.
T Consensus 146 v~~lL~~y~i~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~~L~~~~~~ADIvV~ 208 (288)
T PRK14171 146 CLAVIKKYEPNLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKTHNLSSITSKADIVVA 208 (288)
T ss_pred HHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEE
Confidence 6677666542 38899999987552 335555454444331 22222 3467888876
No 262
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=27.00 E-value=4.1e+02 Score=23.62 Aligned_cols=103 Identities=17% Similarity=0.145 Sum_probs=55.9
Q ss_pred chHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHH
Q 047874 568 GVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLD 647 (941)
Q Consensus 568 ~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 647 (941)
-..+.++.|++.+++++++.-|.... .-+++-|. .++.|...+...-++..-.-.+..+.+-.+++.
T Consensus 9 ~~~~i~~~L~~~~~~vvvid~d~~~~--~~~~~~~~-----------~~i~gd~~~~~~l~~a~i~~a~~vv~~~~~d~~ 75 (116)
T PF02254_consen 9 IGREIAEQLKEGGIDVVVIDRDPERV--EELREEGV-----------EVIYGDATDPEVLERAGIEKADAVVILTDDDEE 75 (116)
T ss_dssp HHHHHHHHHHHTTSEEEEEESSHHHH--HHHHHTTS-----------EEEES-TTSHHHHHHTTGGCESEEEEESSSHHH
T ss_pred HHHHHHHHHHhCCCEEEEEECCcHHH--HHHHhccc-----------ccccccchhhhHHhhcCccccCEEEEccCCHHH
Confidence 45677788888777888888776552 22333332 233333322111111111111222444445666
Q ss_pred HHHHHHHHHhC--CCEEEEEcCCccCHHHHHhCCccEE
Q 047874 648 KLLMVQSLKQK--GHVVAVTGDGTNDAPALRAADIGLS 683 (941)
Q Consensus 648 K~~iv~~l~~~--g~~v~~iGDg~ND~~~l~~A~vgIa 683 (941)
...+...+++. ...+.+.-+..++...|+.+|+-..
T Consensus 76 n~~~~~~~r~~~~~~~ii~~~~~~~~~~~l~~~g~d~v 113 (116)
T PF02254_consen 76 NLLIALLARELNPDIRIIARVNDPENAELLRQAGADHV 113 (116)
T ss_dssp HHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHTT-SEE
T ss_pred HHHHHHHHHHHCCCCeEEEEECCHHHHHHHHHCCcCEE
Confidence 66676777763 3477777777888888888776543
No 263
>PRK12360 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Provisional
Probab=26.23 E-value=8.4e+02 Score=26.23 Aligned_cols=166 Identities=12% Similarity=0.060 Sum_probs=84.5
Q ss_pred ecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccch-----------hhhhcc
Q 047874 483 WKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQ-----------EKLEET 551 (941)
Q Consensus 483 ~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~-----------~~~~e~ 551 (941)
.-|.+..+.+..... +-.....+-..-.+.+....+++++||.++.++.+.-++-..-.. .+.. .
T Consensus 76 AHGv~~~~~~~~~~~---g~~viDaTCP~V~k~~~~v~~~~~~Gy~iviiG~~~HpEv~gi~g~~~~~~~vv~~~~d~-~ 151 (281)
T PRK12360 76 SHGVSKKVYKDLKDK---GLEIIDATCPFVKKIQNIVEEYYNKGYSIIIVGDKNHPEVIGINGWCDNSAYIVNSIEEV-E 151 (281)
T ss_pred CCCCCHHHHHHHHHC---CCeEEeCCCccchHHHHHHHHHHhCCCEEEEEcCCCCceeeEeccCcCCCeEEECCHHHH-h
Confidence 347777776654321 112222333344677888999999999999998765332111000 0000 0
Q ss_pred Cc---EEEEEEeccCCCCcchHHHHHHHHhcCCe------EEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhc
Q 047874 552 GL---TLLGLVGLKDPCRPGVRAAVESCRNAGVN------VKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQF 622 (941)
Q Consensus 552 ~l---~~lG~i~~~d~~~~~~~~~I~~l~~aGi~------v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~ 622 (941)
++ .-++++.---...++..+.++.|++..-+ ++..|-+....+..+|+++.+.
T Consensus 152 ~l~~~~kv~~vsQTT~~~~~~~~iv~~l~~~~~~~~v~~TIC~aT~~RQ~a~~~La~~vD~m------------------ 213 (281)
T PRK12360 152 NIPFLDKACVVAQTTIIPELWEDILNVIKLKSKELVFFNTICSATKKRQESAKELSKEVDVM------------------ 213 (281)
T ss_pred hCccccCEEEEECCCCcHHHHHHHHHHHHHhCcccccCCCcchhhhhHHHHHHHHHHhCCEE------------------
Confidence 01 11344443444444455555555543322 2233334444444444443322
Q ss_pred ccCCHHHHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCC-ccCHHHHHhC-CccEEec
Q 047874 623 RSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDG-TNDAPALRAA-DIGLSMG 685 (941)
Q Consensus 623 ~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg-~ND~~~l~~A-~vgIam~ 685 (941)
.|...-+..+-.++.+..++.+..+..+.+- .-|...|+.+ .|||.-|
T Consensus 214 ---------------iVVGg~~SsNT~rL~eia~~~~~~t~~Ie~~~el~~~~~~~~~~VGitaG 263 (281)
T PRK12360 214 ---------------IVIGGKHSSNTQKLVKICEKNCPNTFHIETADELDLEMLKDYKIIGITAG 263 (281)
T ss_pred ---------------EEecCCCCccHHHHHHHHHHHCCCEEEECChHHCCHHHhCCCCEEEEEcc
Confidence 2444444445556666666667667777653 3356677644 6788777
No 264
>smart00306 HintN Hint (Hedgehog/Intein) domain N-terminal region. Hedgehog/Intein domain, N-terminal region. Domain has been split to accommodate large insertions of endonucleases.
Probab=26.15 E-value=65 Score=27.96 Aligned_cols=29 Identities=17% Similarity=0.109 Sum_probs=22.4
Q ss_pred CCeEEEEECCEEeeeecCCcccCcEEEEc
Q 047874 136 DIRVEVVRDGRRRGLSIFDVVVGEVVCLK 164 (941)
Q Consensus 136 ~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~ 164 (941)
..+..+.++|..+.+.+++|++||.|.+.
T Consensus 71 ~H~~~~~~~~~~~w~~a~~l~~gd~v~~~ 99 (100)
T smart00306 71 DHLLLVRDGGKLVWVFASELKPGDYVLVP 99 (100)
T ss_pred CCEEEEecCCcEEEEEHHHCCCCCEEEec
Confidence 34555666777778999999999999864
No 265
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=26.11 E-value=1.6e+02 Score=30.71 Aligned_cols=134 Identities=18% Similarity=0.229 Sum_probs=73.2
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhccc---C--CHHHHHHhhcCceE
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRS---L--SAEERIAKIESIRV 639 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~---~--~~~~~~~~~~~~~v 639 (941)
+|++..+..+.|++.+|++.++|..--.....+-++.....++. ..+-.-.+++. + ..+.+.. .
T Consensus 139 lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~pn~-----k~vSN~~~F~edg~l~gF~~~Lih------t 207 (298)
T KOG3128|consen 139 LREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHPNV-----KFVSNYMDFDEDGNLCGFSQPLIH------T 207 (298)
T ss_pred HHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCccH-----HhhhhhhhhcccchhhhhhHHHHH------H
Confidence 58899999999999999999999877777766666655444322 11111111110 0 0111111 1
Q ss_pred EEecCHH-HH-HHHHHHHHhCCCEEEEEcCCccCHHHHHhC-Ccc----EEecCCCc-----HHHHhccCEEeccCCchH
Q 047874 640 MARSSPL-DK-LLMVQSLKQKGHVVAVTGDGTNDAPALRAA-DIG----LSMGIQGT-----EVAKESSDIVIMDDNFSS 707 (941)
Q Consensus 640 ~~~~~p~-~K-~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A-~vg----Iam~~~~~-----~~a~~~ad~vl~~~~~~~ 707 (941)
|++.+.. ++ .+....+ +.+..|...||+.-|+.|-.-+ ++| |+.+ ++. ..-.+.-|+++..|....
T Consensus 208 fnkn~~v~~~~s~yf~~~-~~~~nVillGdsigdl~ma~gv~~~~~iLkig~l-~d~vee~~~~ymd~ydIvL~~D~tld 285 (298)
T KOG3128|consen 208 FNKNSSVLQNESEYFHQL-AGRVNVILLGDSIGDLHMADGVPRVGHILKIGYL-NDSVEEALEKYMDSYDIVLVHDETLD 285 (298)
T ss_pred HccchHHHHhhhHHHhhc-cCCceEEEeccccccchhhcCCcccccceeeecc-cchHHHHHHHHHhhcceEEecCcccc
Confidence 2222211 11 1111111 1256889999999998874322 111 2223 221 234567899999887666
Q ss_pred HHHH
Q 047874 708 VVTV 711 (941)
Q Consensus 708 i~~~ 711 (941)
++.-
T Consensus 286 v~~s 289 (298)
T KOG3128|consen 286 VANS 289 (298)
T ss_pred hhHH
Confidence 6543
No 266
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=25.80 E-value=1.1e+02 Score=34.05 Aligned_cols=37 Identities=11% Similarity=0.126 Sum_probs=34.9
Q ss_pred CcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHc-C
Q 047874 566 RPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIEC-G 602 (941)
Q Consensus 566 ~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~-g 602 (941)
-|++.+.+++|+++|+++.++|+-....+..+.+.+ |
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhC
Confidence 579999999999999999999999999999999996 6
No 267
>PF02219 MTHFR: Methylenetetrahydrofolate reductase; InterPro: IPR003171 This family includes the 5,10-methylenetetrahydrofolate reductase 1.7.99.5 from EC from bacteria and methylenetetrahydrofolate reductase 1.5.1.20 from EC from eukaryotes. The structure for this domain is known [] to be a TIM barrel.; GO: 0004489 methylenetetrahydrofolate reductase (NADPH) activity, 0006555 methionine metabolic process, 0055114 oxidation-reduction process; PDB: 3IJD_B 1B5T_B 3FSU_C 1ZPT_C 2FMO_B 3FST_C 2FMN_C 1ZP3_A 1ZP4_B 1ZRQ_B ....
Probab=25.23 E-value=2.1e+02 Score=30.94 Aligned_cols=44 Identities=20% Similarity=0.356 Sum_probs=34.6
Q ss_pred ccCcEEEEEEeccCCCCcchHHHHHHHHhcCCe-EEEEcCCCHHH
Q 047874 550 ETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVN-VKMVTGDNVHT 593 (941)
Q Consensus 550 e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~-v~i~TGd~~~~ 593 (941)
+.++..+--+..+|.-+.+..+.+..++++||+ +..+|||.+..
T Consensus 68 ~~g~~~i~Hlt~rd~n~~~l~~~L~~~~~~Gi~niL~l~GD~~~~ 112 (287)
T PF02219_consen 68 ETGIEPIPHLTCRDRNREALQSDLLGAHALGIRNILALTGDPPKG 112 (287)
T ss_dssp HTT--EEEEEESTTSBHHHHHHHHHHHHHTT--EEEEESS-TSTT
T ss_pred HhCCceEEeecccCCCHHHHHHHHHHHHHcCCCeEEEecCCCCCC
Confidence 567888999999999999999999999999997 99999998654
No 268
>PF12368 DUF3650: Protein of unknown function (DUF3650) ; InterPro: IPR022111 This domain family is found in bacteria, and is approximately 30 amino acids in length. The family is found in association with PF00581 from PFAM. There is a single completely conserved residue N that may be functionally important.
Probab=24.78 E-value=43 Score=21.99 Aligned_cols=15 Identities=20% Similarity=0.490 Sum_probs=12.5
Q ss_pred CCCCCccHHHHHHHHhh
Q 047874 32 KGGIRGSEADLGHRINV 48 (941)
Q Consensus 32 ~~GLs~~~~~~~~r~~~ 48 (941)
++|||.+| +.+|++.
T Consensus 13 eh~ls~ee--~~~RL~~ 27 (28)
T PF12368_consen 13 EHGLSEEE--VAERLAA 27 (28)
T ss_pred hcCCCHHH--HHHHHHc
Confidence 57999988 9999875
No 269
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]
Probab=24.76 E-value=83 Score=27.76 Aligned_cols=29 Identities=24% Similarity=0.462 Sum_probs=23.1
Q ss_pred EEEECCEEeeeecCCcccCcEEEEcCCCee
Q 047874 140 EVVRDGRRRGLSIFDVVVGEVVCLKTGDQI 169 (941)
Q Consensus 140 ~V~R~g~~~~i~~~~Lv~GDiI~l~~G~~i 169 (941)
+|.-||+.. -++.++++||+|.|.-|...
T Consensus 35 rV~vNG~~a-KpS~~VK~GD~l~i~~~~~~ 63 (100)
T COG1188 35 RVKVNGQRA-KPSKEVKVGDILTIRFGNKE 63 (100)
T ss_pred eEEECCEEc-ccccccCCCCEEEEEeCCcE
Confidence 455677665 68999999999999888653
No 270
>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]
Probab=24.15 E-value=3e+02 Score=29.41 Aligned_cols=63 Identities=19% Similarity=0.245 Sum_probs=40.1
Q ss_pred EEEecCHHHHHHHHHHHHh--CCCEEEEEcCCcc----CHHHHHhCCccEEecCCCc---HHHHhccCEEec
Q 047874 639 VMARSSPLDKLLMVQSLKQ--KGHVVAVTGDGTN----DAPALRAADIGLSMGIQGT---EVAKESSDIVIM 701 (941)
Q Consensus 639 v~~~~~p~~K~~iv~~l~~--~g~~v~~iGDg~N----D~~~l~~A~vgIam~~~~~---~~a~~~ad~vl~ 701 (941)
.+--|||..-..+++.+.- +|..+..+|-|.= =+.||..++..|.+.-+.+ ...-..||+++.
T Consensus 134 ~~~PCTp~gi~~ll~~~~i~l~Gk~~vVVGrS~iVGkPla~lL~~~naTVtvcHs~T~~l~~~~k~ADIvv~ 205 (283)
T COG0190 134 GFLPCTPAGIMTLLEEYGIDLRGKNVVVVGRSNIVGKPLALLLLNANATVTVCHSRTKDLASITKNADIVVV 205 (283)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHhCCCEEEEEcCCCCCHHHHhhhCCEEEE
Confidence 4556888888888877766 5889999998632 1345666666655542222 223456787765
No 271
>PRK00208 thiG thiazole synthase; Reviewed
Probab=23.99 E-value=6.6e+02 Score=26.38 Aligned_cols=53 Identities=15% Similarity=0.097 Sum_probs=43.1
Q ss_pred hhccCcEEEEEEeccCCCCcchHHHHHHHHhc---CCeEEEEcCCCHHHHHHHHHH
Q 047874 548 LEETGLTLLGLVGLKDPCRPGVRAAVESCRNA---GVNVKMVTGDNVHTARAIAIE 600 (941)
Q Consensus 548 ~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~a---Gi~v~i~TGd~~~~a~~ia~~ 600 (941)
....|++=+=+++=.+-+.++..++++.++.. |..++-.+-|++..|+++++-
T Consensus 88 ~~~~~~iKlEVi~d~~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak~l~~~ 143 (250)
T PRK00208 88 ALGTNWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLEEA 143 (250)
T ss_pred HhCCCeEEEEEecCCCCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 34677777777777788899999999999999 999996667777788887764
No 272
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=23.47 E-value=9.7e+02 Score=26.02 Aligned_cols=169 Identities=15% Similarity=0.092 Sum_probs=85.4
Q ss_pred CHHHHHHHHHHHHHHHhc-ccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCcc--hHHHHHHHHhcCCeEE
Q 047874 508 DGEERTQIEKIIQEMAAK-SLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPG--VRAAVESCRNAGVNVK 584 (941)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~-g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~--~~~~I~~l~~aGi~v~ 584 (941)
.++.++++.+.++++.++ |.+. . ++++...|.+... ++..++.|++.||++.
T Consensus 18 A~~i~~~l~~~v~~l~~~~g~~P-~------------------------LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~ 72 (299)
T PLN02516 18 AKAIRSEIAEEVAQLSEKHGKVP-G------------------------LAVVIVGSRKDSQTYVNMKRKACAEVGIKSF 72 (299)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCC-e------------------------EEEEEECCChhHHHHHHHHHHHHHHcCCEEE
Confidence 345566677777776555 5432 1 3333344433332 5567788888899864
Q ss_pred EE--cCC-CHHHHHHHHHHcCCCCCCC------CCCcc-------cceecchhcccCCHHHHHHhhcC--ceEEEecCHH
Q 047874 585 MV--TGD-NVHTARAIAIECGILNPDV------DLNKD-------EAVIEGVQFRSLSAEERIAKIES--IRVMARSSPL 646 (941)
Q Consensus 585 i~--TGd-~~~~a~~ia~~~gi~~~~~------~~~~~-------~~~~~g~~~~~~~~~~~~~~~~~--~~v~~~~~p~ 646 (941)
.. ..+ ..+.....-++++-+..-. +++.+ ..+---++.+.++...+...... -.-|.-|||.
T Consensus 73 ~~~l~~~~s~~el~~~I~~lN~D~~V~GIlvq~PlP~~id~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~ 152 (299)
T PLN02516 73 DVDLPENISEAELISKVHELNANPDVHGILVQLPLPKHINEEKILNEISLEKDVDGFHPLNIGKLAMKGREPLFLPCTPK 152 (299)
T ss_pred EEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCCcCHHHHHhccCcccccCccCHhhHhhHhcCCCCCCCCCCCHH
Confidence 44 322 3444555555554332100 00000 00111123333444444444322 2346677888
Q ss_pred HHHHHHHHHHh--CCCEEEEEcCCccC----HHHHHh--CCccEEecCCC-cHHHHhccCEEec
Q 047874 647 DKLLMVQSLKQ--KGHVVAVTGDGTND----APALRA--ADIGLSMGIQG-TEVAKESSDIVIM 701 (941)
Q Consensus 647 ~K~~iv~~l~~--~g~~v~~iGDg~ND----~~~l~~--A~vgIam~~~~-~~~a~~~ad~vl~ 701 (941)
.=.++++...- .|..|+.+|.+..= +.||.. |.|-++-.... .......||+++.
T Consensus 153 avi~lL~~~~i~l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T~nl~~~~~~ADIvv~ 216 (299)
T PLN02516 153 GCLELLSRSGIPIKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRTPDPESIVREADIVIA 216 (299)
T ss_pred HHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEE
Confidence 76666665532 38899999998652 334544 44444433111 1224467888876
No 273
>PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis. This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [] it is probably the anticodon binding domain [].; GO: 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding; PDB: 1KOG_B 1EVL_D 1EVK_B 1QF6_A 1FYF_B 2I4O_A 2I4M_A 2I4N_A 2I4L_A 1HC7_D ....
Probab=23.15 E-value=1.4e+02 Score=25.61 Aligned_cols=48 Identities=15% Similarity=0.158 Sum_probs=38.0
Q ss_pred EEEeccC---CCCcchHHHHHHHHhcCCeEEEE-cCCCHHHHHHHHHHcCCC
Q 047874 557 GLVGLKD---PCRPGVRAAVESCRNAGVNVKMV-TGDNVHTARAIAIECGIL 604 (941)
Q Consensus 557 G~i~~~d---~~~~~~~~~I~~l~~aGi~v~i~-TGd~~~~a~~ia~~~gi~ 604 (941)
.++.+.+ ...+-+.+..+.|+++|+++.+- ++++......-|...|++
T Consensus 3 ~Ii~~~~~~~~~~~~a~~l~~~L~~~gi~v~~d~~~~~~~k~~~~a~~~g~p 54 (94)
T PF03129_consen 3 VIIPVGKKDEEIIEYAQELANKLRKAGIRVELDDSDKSLGKQIKYADKLGIP 54 (94)
T ss_dssp EEEESSCSHHHHHHHHHHHHHHHHHTTSEEEEESSSSTHHHHHHHHHHTTES
T ss_pred EEEEeCCCcHHHHHHHHHHHHHHHHCCCEEEEECCCCchhHHHHHHhhcCCe
Confidence 3455555 56677889999999999998887 667777778888888886
No 274
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=22.95 E-value=7e+02 Score=26.17 Aligned_cols=52 Identities=15% Similarity=0.114 Sum_probs=43.0
Q ss_pred hccCcEEEEEEeccCCCCcchHHHHHHHHhc---CCeEEEEcCCCHHHHHHHHHH
Q 047874 549 EETGLTLLGLVGLKDPCRPGVRAAVESCRNA---GVNVKMVTGDNVHTARAIAIE 600 (941)
Q Consensus 549 ~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~a---Gi~v~i~TGd~~~~a~~ia~~ 600 (941)
...|++=+=+++=.+-+.++..++++.++.. |..++-.+.|++..|+++++-
T Consensus 89 ~~~~~iKlEVi~d~~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~~ 143 (248)
T cd04728 89 LGTDWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLEDA 143 (248)
T ss_pred hCCCeEEEEEecCccccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 3567777777777788899999999999999 999997777788888888765
No 275
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=22.58 E-value=1.7e+02 Score=30.25 Aligned_cols=99 Identities=16% Similarity=0.141 Sum_probs=59.9
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcC-CCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECG-ILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~g-i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
+.||+.+.++.|+..|+.+.++|+.+..+...-.+..+ +...- ......+|.++..- ..
T Consensus 93 ~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f----~~~v~~d~~~v~~g----------------KP 152 (222)
T KOG2914|consen 93 LMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNF----SHVVLGDDPEVKNG----------------KP 152 (222)
T ss_pred cCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhc----CCCeecCCccccCC----------------CC
Confidence 45699999999999999999999998777666555554 32210 01111233332211 22
Q ss_pred CHHHHHHHHHHHHhCC-CEEEEEcCCccCHHHHHhCCccEE
Q 047874 644 SPLDKLLMVQSLKQKG-HVVAVTGDGTNDAPALRAADIGLS 683 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g-~~v~~iGDg~ND~~~l~~A~vgIa 683 (941)
.|+-=....+.+.... +.++++.|..+=..|-++|+.=+-
T Consensus 153 ~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi 193 (222)
T KOG2914|consen 153 DPDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVV 193 (222)
T ss_pred CchHHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEE
Confidence 3443344445555555 677777777777777777765443
No 276
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.41 E-value=2.5e+02 Score=30.26 Aligned_cols=63 Identities=16% Similarity=0.289 Sum_probs=37.5
Q ss_pred EEEecCHHHHHHHHHHHHh--CCCEEEEEcCCccC----HHHHHhCCccEEecCCCc-H--HHHhccCEEec
Q 047874 639 VMARSSPLDKLLMVQSLKQ--KGHVVAVTGDGTND----APALRAADIGLSMGIQGT-E--VAKESSDIVIM 701 (941)
Q Consensus 639 v~~~~~p~~K~~iv~~l~~--~g~~v~~iGDg~ND----~~~l~~A~vgIam~~~~~-~--~a~~~ad~vl~ 701 (941)
-|.-|||..=.++++.+.- .|..|+.+|.+..= +.||...|..|.+.-+.+ + ..-..||+++.
T Consensus 133 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l~~~~~~ADIvIs 204 (287)
T PRK14173 133 ALEPCTPAGVVRLLKHYGIPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDLPAVTRRADVLVV 204 (287)
T ss_pred CCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEE
Confidence 4667788777777776543 38899999987552 335555444443321222 2 23466888875
No 277
>COG0309 HypE Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]
Probab=22.06 E-value=4.1e+02 Score=29.17 Aligned_cols=85 Identities=16% Similarity=0.282 Sum_probs=64.4
Q ss_pred EEeccCCCCcchHHHHHHHHhc-CCeEEEEcCCC--HHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhh
Q 047874 558 LVGLKDPCRPGVRAAVESCRNA-GVNVKMVTGDN--VHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKI 634 (941)
Q Consensus 558 ~i~~~d~~~~~~~~~I~~l~~a-Gi~v~i~TGd~--~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 634 (941)
+++++|+-|-+...++.++-++ |+.+.+--..- ...++.+++.+|+++- ...
T Consensus 219 vtAMhDaTrGGla~aLnEmA~aSgvgi~I~ee~Ipv~~eVr~vce~lGiDPl-------------------------~~a 273 (339)
T COG0309 219 VTAMHDATRGGLAGALNEMAEASGVGISIEEEKIPVREEVRGVCELLGLDPL-------------------------ELA 273 (339)
T ss_pred hhhccCCchhHHHHHHHHHHHHcCCeEEEeeccccccHHHHHHHHHhCCCHH-------------------------Hhh
Confidence 6789999999999999887755 77777665553 4578999999999851 112
Q ss_pred cCceEEEecCHHHHHHHHHHHHhCC-CEEEEEcC
Q 047874 635 ESIRVMARSSPLDKLLMVQSLKQKG-HVVAVTGD 667 (941)
Q Consensus 635 ~~~~v~~~~~p~~K~~iv~~l~~~g-~~v~~iGD 667 (941)
.+-.+.+-+.|++-.+.++.|++.+ .....+|-
T Consensus 274 nEG~lv~~V~~~~a~~~l~~L~~~~~~~A~iIGe 307 (339)
T COG0309 274 NEGKLVIAVPPEHAEEVLEALRSHGLKDAAIIGE 307 (339)
T ss_pred cCceEEEEECHHHHHHHHHHHHhcCCccceeEEE
Confidence 2234778888998899999999988 56666664
No 278
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=22.03 E-value=66 Score=32.27 Aligned_cols=29 Identities=24% Similarity=0.435 Sum_probs=23.2
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHH
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVH 592 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~ 592 (941)
++-||+.+++++|.+.|..++++|+++..
T Consensus 73 ~p~~gA~e~l~~L~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 73 PPIPGAVEALKKLRDKGHEIVIITARPPE 101 (191)
T ss_dssp -B-TTHHHHHHHHHTSTTEEEEEEE-SSS
T ss_pred CccHHHHHHHHHHHHcCCcEEEEEecCcc
Confidence 45689999999999999999999988653
No 279
>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.00 E-value=1.4e+02 Score=32.34 Aligned_cols=62 Identities=18% Similarity=0.187 Sum_probs=38.0
Q ss_pred EEEecCHHHHHHHHHHHHh--CCCEEEEEcCCccC----HHHHHh------CCccEEecCCCcH--HHHhccCEEec
Q 047874 639 VMARSSPLDKLLMVQSLKQ--KGHVVAVTGDGTND----APALRA------ADIGLSMGIQGTE--VAKESSDIVIM 701 (941)
Q Consensus 639 v~~~~~p~~K~~iv~~l~~--~g~~v~~iGDg~ND----~~~l~~------A~vgIam~~~~~~--~a~~~ad~vl~ 701 (941)
-|.-|||..=.++++...- .|..|+.+|.+..= +.||.. |-|.++-. ...+ ..-..||+++.
T Consensus 139 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~atVtv~hs-~T~~l~~~~~~ADIvVs 214 (297)
T PRK14168 139 KFLPCTPAGIQEMLVRSGVETSGAEVVVVGRSNIVGKPIANMMTQKGPGANATVTIVHT-RSKNLARHCQRADILIV 214 (297)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcccHHHHHHHHhcccCCCCEEEEecC-CCcCHHHHHhhCCEEEE
Confidence 4566777777777666542 38899999997552 334443 45555543 2222 24477888875
No 280
>PRK04980 hypothetical protein; Provisional
Probab=21.86 E-value=1.6e+02 Score=26.19 Aligned_cols=55 Identities=15% Similarity=0.088 Sum_probs=37.3
Q ss_pred CCeEEEEECCEEeeeecCCcccCcEEEEc--CCCeeecceEEEecceEEEee-----ccCCCCCCce
Q 047874 136 DIRVEVVRDGRRRGLSIFDVVVGEVVCLK--TGDQIPADGLFLNGHSLKVDE-----SSMTGESDRV 195 (941)
Q Consensus 136 ~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~--~G~~iPaD~~ll~g~~l~Vde-----s~LTGEs~pv 195 (941)
-++..-+||+. ....+|||++.|. .+.+.-|+..+++-.-...|| +..-|+|.+.
T Consensus 18 GkKTiTiRd~s-----e~~~~~G~~~~V~~~e~g~~~c~ieI~sV~~i~f~eLte~hA~qEg~sL~e 79 (102)
T PRK04980 18 GRKTITIRDES-----ESHFKPGDVLRVGTFEDDRYFCTIEVLSVSPVTFDELNEKHAEQENMTLPE 79 (102)
T ss_pred CCceEEeeCCc-----ccCCCCCCEEEEEECCCCcEEEEEEEEEEEEEehhhCCHHHHHHhCCCHHH
Confidence 34555567753 3578999999997 888999999999865433332 2345665443
No 281
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=21.16 E-value=1.4e+02 Score=32.01 Aligned_cols=48 Identities=19% Similarity=0.293 Sum_probs=40.8
Q ss_pred EEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHH---HcCCC
Q 047874 557 GLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAI---ECGIL 604 (941)
Q Consensus 557 G~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~---~~gi~ 604 (941)
|++-..+.+-|++.++++.|+++|-++.++|..+-.+-+..++ ++|+.
T Consensus 31 GVlW~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~ 81 (306)
T KOG2882|consen 31 GVLWLGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFN 81 (306)
T ss_pred cceeecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcc
Confidence 7778889999999999999999999999999998877777665 44554
No 282
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=21.10 E-value=2.3e+02 Score=30.68 Aligned_cols=39 Identities=23% Similarity=0.367 Sum_probs=29.3
Q ss_pred CcchHHHHHHHHhcCCeEEEEcCCCHHHH-HHHHHHcCCC
Q 047874 566 RPGVRAAVESCRNAGVNVKMVTGDNVHTA-RAIAIECGIL 604 (941)
Q Consensus 566 ~~~~~~~I~~l~~aGi~v~i~TGd~~~~a-~~ia~~~gi~ 604 (941)
-+++...-+.|+..|.+++++|.+....+ ++..+.++..
T Consensus 62 P~GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~~ 101 (291)
T PF14336_consen 62 PPGAAALARALQALGKEVVIVTDERCAPVVKAAVRAAGLQ 101 (291)
T ss_pred hHHHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhhC
Confidence 46788888999999999999998865554 4455555554
No 283
>COG0272 Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair]
Probab=20.96 E-value=1.6e+02 Score=35.32 Aligned_cols=76 Identities=17% Similarity=0.308 Sum_probs=46.0
Q ss_pred eecCCcccCcEEEE-cCCCeeec-ceEEEecceEEEeeccCCCCCCceecCCCCCeEeeccEEeeeeEEEEEEEEcccCh
Q 047874 150 LSIFDVVVGEVVCL-KTGDQIPA-DGLFLNGHSLKVDESSMTGESDRVEVDEKNPFLLSGTKVTAGYGFMLVTSVGMSTA 227 (941)
Q Consensus 150 i~~~~Lv~GDiI~l-~~G~~iPa-D~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~ 227 (941)
|.-.||.+||-|.| ++||+||- ++++.+.. +|+..|.. .+. .+=-.||.+......+..-.++...+
T Consensus 363 I~rkdIrIGDtV~V~kAGdVIP~V~~Vv~e~R---------~~~~~~~~-~P~-~CP~C~s~l~r~~~e~~~rC~n~~~C 431 (667)
T COG0272 363 IKRKDIRIGDTVVVRKAGDVIPQVVGVVLEKR---------PGNEKPIP-FPT-HCPVCGSELVREEGEVVIRCTNGLNC 431 (667)
T ss_pred HHhcCCCCCCEEEEEecCCCCcceeeeecccC---------CCCCCCCC-CCC-CCCCCCCeeEeccCceeEecCCCCCC
Confidence 34579999999999 69999995 44444332 34444432 111 11245777777666666666675555
Q ss_pred hhHHHHhhc
Q 047874 228 WGEMMSSIS 236 (941)
Q Consensus 228 ~g~i~~~~~ 236 (941)
-++....+.
T Consensus 432 ~aq~~e~l~ 440 (667)
T COG0272 432 PAQLKERLI 440 (667)
T ss_pred hHHHhhhee
Confidence 555555543
No 284
>PRK03692 putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Provisional
Probab=20.94 E-value=5e+02 Score=27.27 Aligned_cols=122 Identities=12% Similarity=0.134 Sum_probs=68.2
Q ss_pred hHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHH
Q 047874 569 VRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDK 648 (941)
Q Consensus 569 ~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 648 (941)
..+.++.+.+.|.++.++ |..+..+...++.+.-.. +. -+-|.. ..-.+|++.
T Consensus 94 ~~~ll~~~~~~~~~v~ll-G~~~~v~~~a~~~l~~~y-~l-------~i~g~~------------------~Gyf~~~e~ 146 (243)
T PRK03692 94 WEALMARAGKEGTPVFLV-GGKPEVLAQTEAKLRTQW-NV-------NIVGSQ------------------DGYFTPEQR 146 (243)
T ss_pred HHHHHHHHHhcCCeEEEE-CCCHHHHHHHHHHHHHHh-CC-------EEEEEe------------------CCCCCHHHH
Confidence 346677777889999999 666666666666553221 00 000100 000135566
Q ss_pred HHHHHHHHhCCCEEEEEcCCccCHHH-------HHhCCccEEecCCCcHHH---HhccCEEeccCCchHHHHHHHHHHHH
Q 047874 649 LLMVQSLKQKGHVVAVTGDGTNDAPA-------LRAADIGLSMGIQGTEVA---KESSDIVIMDDNFSSVVTVLRWGRCV 718 (941)
Q Consensus 649 ~~iv~~l~~~g~~v~~iGDg~ND~~~-------l~~A~vgIam~~~~~~~a---~~~ad~vl~~~~~~~i~~~i~~gR~~ 718 (941)
.++++.+.+.+..++.+|=|.-=-+. .-.+.+.+++| .+-|.. ..-|.-.+.+-++..+..++.|=|+.
T Consensus 147 ~~i~~~I~~s~~dil~VglG~PkQE~~~~~~~~~~~~~v~~gvG-g~fD~~aG~~~RAP~w~~~~gLEWlyRl~~EP~R~ 225 (243)
T PRK03692 147 QALFERIHASGAKIVTVAMGSPKQEIFMRDCRLVYPDALYMGVG-GTYDVFTGHVKRAPKIWQNLGLEWLYRLLSQPSRI 225 (243)
T ss_pred HHHHHHHHhcCCCEEEEECCCcHHHHHHHHHHHhCCCCEEEEeC-eEEEEecCCcCcCcHHHHHhChHHHHHhHhCcHHH
Confidence 67888888888888888877542211 11234555555 222211 22233334445788888888887664
No 285
>TIGR00676 fadh2 5,10-methylenetetrahydrofolate reductase, prokaryotic form. This protein is an FAD-containing flavoprotein.
Probab=20.93 E-value=2.5e+02 Score=30.00 Aligned_cols=43 Identities=21% Similarity=0.369 Sum_probs=36.3
Q ss_pred ccCcEEEEEEeccCCCCcchHHHHHHHHhcCCe-EEEEcCCCHH
Q 047874 550 ETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVN-VKMVTGDNVH 592 (941)
Q Consensus 550 e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~-v~i~TGd~~~ 592 (941)
+.+...+--+...|.-+.+..+.+..++++||+ +..+|||.+.
T Consensus 56 ~~g~~~i~Hlt~r~~n~~~l~~~L~~~~~~Gi~nvL~l~GD~~~ 99 (272)
T TIGR00676 56 ETGIPTVPHLTCIGATREEIREILREYRELGIRHILALRGDPPK 99 (272)
T ss_pred hcCCCeeEEeeecCCCHHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 347777888888898888999999999999998 6669999874
No 286
>PLN02645 phosphoglycolate phosphatase
Probab=20.65 E-value=1.8e+02 Score=31.71 Aligned_cols=65 Identities=14% Similarity=0.122 Sum_probs=38.9
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCc-cCHHHHHhCCcc-EEecCCC--c-HHHH-----hccCEEeccCCchHHHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGT-NDAPALRAADIG-LSMGIQG--T-EVAK-----ESSDIVIMDDNFSSVVTV 711 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~-ND~~~l~~A~vg-Iam~~~~--~-~~a~-----~~ad~vl~~~~~~~i~~~ 711 (941)
+|.-=..+.+.+.-..+.++||||.. +|..+=+.|++- |.+. .| . +... ..+|+++. ++..+.++
T Consensus 232 ~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~-~G~~~~~~~~~~~~~~~pd~~~~--~~~~l~~~ 306 (311)
T PLN02645 232 STFMMDYLANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVL-SGVTSESMLLSPENKIQPDFYTS--KISDFLTL 306 (311)
T ss_pred hHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEc-CCCCCHHHHHhccCCCCCCEEEC--CHHHHHHH
Confidence 33333334444444567899999997 999999999963 4443 22 2 2221 24677774 55555543
No 287
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=20.38 E-value=4.4e+02 Score=27.11 Aligned_cols=106 Identities=15% Similarity=0.101 Sum_probs=69.3
Q ss_pred EEEeccCCCCcc--hHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhh
Q 047874 557 GLVGLKDPCRPG--VRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKI 634 (941)
Q Consensus 557 G~i~~~d~~~~~--~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 634 (941)
|..-++| ++|+ .++.+-.|++.+ -|++|.-....|..+-+++||.+. .+.++.=+..+.+
T Consensus 92 ~~LPlq~-LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~LGieDc------Fegii~~e~~np~--------- 153 (244)
T KOG3109|consen 92 GRLPLQD-LKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKLGIEDC------FEGIICFETLNPI--------- 153 (244)
T ss_pred ccCcHhh-cCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHhChHHh------ccceeEeeccCCC---------
Confidence 4455566 6776 567777777665 899999999999999999999862 1111111111111
Q ss_pred cCceEEEecCHHHHHHHHHHHHhC-CCEEEEEcCCccCHHHHHhCCcc
Q 047874 635 ESIRVMARSSPLDKLLMVQSLKQK-GHVVAVTGDGTNDAPALRAADIG 681 (941)
Q Consensus 635 ~~~~v~~~~~p~~K~~iv~~l~~~-g~~v~~iGDg~ND~~~l~~A~vg 681 (941)
+..++|.-+++.=....+...-. ...+.++-|+.+....=+.-|..
T Consensus 154 -~~~~vcKP~~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~ 200 (244)
T KOG3109|consen 154 -EKTVVCKPSEEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLK 200 (244)
T ss_pred -CCceeecCCHHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHhccce
Confidence 12377777776555555544433 56899999999998876665553
No 288
>COG3329 Predicted permease [General function prediction only]
Probab=20.37 E-value=4.6e+02 Score=28.26 Aligned_cols=60 Identities=15% Similarity=0.212 Sum_probs=37.2
Q ss_pred HHHHHhhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHhhhcccccCCcCccchh
Q 047874 42 LGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDG 102 (941)
Q Consensus 42 ~~~r~~~~G~N~~~~~~~~~~~~~l~~~f~~~~~~~lli~~~ls~~~~~~~~~~~~~~~~~ 102 (941)
...|+++--+|.-+.. .-..|+.+.|.|.+|....++...++-++.|.........++++
T Consensus 188 ~ssr~~~~~~~~~ed~-~v~~~ell~Esflnpal~lllggl~iGlitGe~g~~vl~~F~~~ 247 (372)
T COG3329 188 ASSRQEYLSPQWGEDN-RVKIWELLQESFLNPALVLLLGGLAIGLITGEQGESVLKPFFDP 247 (372)
T ss_pred hhhhhhhcccccCccc-chhhHHHHHHHHcCchHHHHHHHHHHhheeccCchhhhhhhhHH
Confidence 3344444444444333 34678999999999999888888777776654332223345544
No 289
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=20.35 E-value=1.1e+02 Score=30.82 Aligned_cols=81 Identities=20% Similarity=0.174 Sum_probs=57.1
Q ss_pred HHHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCe---EEEEcCCCHHHHHH
Q 047874 520 QEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVN---VKMVTGDNVHTARA 596 (941)
Q Consensus 520 ~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~---v~i~TGd~~~~a~~ 596 (941)
.-+..+|++|+.++.. .+.+ ...+...+.+-.++|+-.....-.+..++.++.++++|.+ .+++-|... + ..
T Consensus 106 ~~l~~~G~~vi~LG~~-vp~e--~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~v~i~vGG~~~-~-~~ 180 (197)
T TIGR02370 106 TMLRANGFDVIDLGRD-VPID--TVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEGYRDSVKFMVGGAPV-T-QD 180 (197)
T ss_pred HHHHhCCcEEEECCCC-CCHH--HHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcCCCCCCEEEEEChhc-C-HH
Confidence 3456789999887642 2111 1112334667789999999999999999999999999875 455566554 3 46
Q ss_pred HHHHcCCCC
Q 047874 597 IAIECGILN 605 (941)
Q Consensus 597 ia~~~gi~~ 605 (941)
+|+++|-+.
T Consensus 181 ~~~~~gad~ 189 (197)
T TIGR02370 181 WADKIGADV 189 (197)
T ss_pred HHHHhCCcE
Confidence 889988763
Done!