Query 047875
Match_columns 92
No_of_seqs 112 out of 632
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 06:34:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047875.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047875hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1y74_B MLIN-2/CASK, peripheral 65.8 2.3 7.8E-05 23.9 1.1 20 49-68 26-49 (50)
2 1und_A Advillin, P92; actin bi 65.3 1.8 6E-05 23.8 0.5 20 49-68 1-20 (37)
3 2al3_A TUG long isoform; TUG U 65.2 8.2 0.00028 24.8 3.8 44 30-76 9-52 (90)
4 2xko_C PIPX, global nitrogen r 46.3 2.2 7.4E-05 27.8 -1.4 9 49-57 5-13 (89)
5 1yu8_X Villin; alpha helix, 3- 40.4 7.2 0.00025 23.8 0.4 20 49-68 31-50 (67)
6 2nz0_B Potassium voltage-gated 39.6 18 0.00062 24.4 2.4 60 27-91 32-92 (140)
7 1ujs_A Actin-binding LIM prote 36.2 10 0.00035 24.4 0.6 20 49-68 46-65 (88)
8 1qzp_A Dematin; villin headpie 35.5 6.4 0.00022 24.0 -0.4 20 49-68 32-51 (68)
9 2k6m_S Supervillin; SVHP, HP, 34.3 8 0.00027 23.6 -0.1 20 49-68 31-50 (67)
10 3n5b_B ASR0485 protein; PII, P 33.0 4.8 0.00016 27.1 -1.4 9 50-58 29-37 (112)
11 3drz_A BTB/POZ domain-containi 31.8 76 0.0026 19.7 4.3 58 29-91 5-67 (107)
12 1s1g_A Potassium voltage-gated 31.7 18 0.0006 23.9 1.3 59 28-91 11-70 (124)
13 2vkp_A BTB/POZ domain-containi 31.6 57 0.002 19.3 3.6 54 32-90 11-68 (109)
14 2vpk_A Myoneurin; transcriptio 31.6 45 0.0015 20.2 3.1 48 32-90 25-77 (116)
15 1r29_A B-cell lymphoma 6 prote 30.1 46 0.0016 20.5 3.0 51 32-90 32-86 (127)
16 3bux_B E3 ubiquitin-protein li 30.1 91 0.0031 24.4 5.2 55 10-67 254-314 (329)
17 3pmi_A PWWP domain-containing 29.2 19 0.00066 24.9 1.1 29 40-68 47-78 (134)
18 1y6i_A Mg-chelatase cofactor G 28.7 3.6 0.00012 30.7 -2.8 31 24-57 199-229 (233)
19 4b4u_A Bifunctional protein fo 28.6 1.1E+02 0.0037 23.3 5.4 53 25-90 50-104 (303)
20 3qli_A Coenzyme A transferase; 28.1 33 0.0011 27.5 2.5 43 26-69 403-454 (455)
21 2bkf_A Zinc-finger protein NBR 27.6 1.2E+02 0.0041 19.2 4.8 48 35-86 13-68 (87)
22 1zav_U 50S ribosomal protein L 27.6 36 0.0012 17.5 1.8 13 56-68 18-30 (30)
23 1vd2_A Protein kinase C, IOTA 27.6 1E+02 0.0035 19.3 4.4 28 40-71 16-43 (89)
24 3ga1_A Nucleus accumbens-assoc 27.3 85 0.0029 19.4 4.0 48 32-90 36-87 (129)
25 3ezo_A Malonyl COA-acyl carrie 27.0 41 0.0014 24.8 2.7 40 30-70 10-49 (318)
26 3p2o_A Bifunctional protein fo 26.6 1.2E+02 0.0041 22.8 5.3 51 28-91 33-85 (285)
27 1wy3_A Villin; structural prot 25.7 18 0.00062 19.4 0.4 18 51-68 1-18 (35)
28 1wj6_A KIAA0049 protein, RSGI 23.2 1.6E+02 0.0055 19.2 4.8 49 34-86 20-76 (101)
29 2if5_A Zinc finger and BTB dom 21.8 1.1E+02 0.0039 18.3 3.7 52 32-90 28-82 (120)
30 1b0a_A Protein (fold bifunctio 21.7 2.4E+02 0.0083 21.1 6.1 52 27-91 32-85 (288)
31 1w8x_N Protein P31, protein C, 21.2 19 0.00066 24.3 -0.1 30 26-57 84-123 (126)
32 1nn7_A Potassium channel KV4.2 21.0 12 0.0004 23.9 -1.2 54 32-90 2-56 (105)
33 3eh7_A 4-hydroxybutyrate COA-t 20.8 53 0.0018 25.8 2.4 18 51-68 416-434 (434)
No 1
>1y74_B MLIN-2/CASK, peripheral plasma membrane protein CASK; L27 domain, scaffold protein, protein assembly, cell polarity, transport protein; NMR {Mus musculus} SCOP: a.194.1.1 PDB: 1zl8_B
Probab=65.84 E-value=2.3 Score=23.94 Aligned_cols=20 Identities=35% Similarity=0.541 Sum_probs=15.7
Q ss_pred cCCCchHHHHHHHH----HhhhhC
Q 047875 49 SHLKHPSFQNLLSQ----AGEEFG 68 (92)
Q Consensus 49 ~yL~hP~F~~LL~~----aeeEfG 68 (92)
..|+.|.||+||+- |.++||
T Consensus 26 ~lL~~PHfqaLl~ahD~Va~~~y~ 49 (50)
T 1y74_B 26 RILTQPHFMALLQTHDVVAHEVYS 49 (50)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHcCHHHHHHHHHHHHHHHHHhc
Confidence 46889999999975 566665
No 2
>1und_A Advillin, P92; actin binding, F-actin binding, cytoskeleton, headpiece subdomain; NMR {Homo sapiens} SCOP: a.14.1.1
Probab=65.26 E-value=1.8 Score=23.78 Aligned_cols=20 Identities=15% Similarity=0.333 Sum_probs=17.5
Q ss_pred cCCCchHHHHHHHHHhhhhC
Q 047875 49 SHLKHPSFQNLLSQAGEEFG 68 (92)
Q Consensus 49 ~yL~hP~F~~LL~~aeeEfG 68 (92)
.||+.-.|++++.++.+||-
T Consensus 1 ~yLsd~dF~~vFgmsr~eF~ 20 (37)
T 1und_A 1 XYLSEQDFVSVFGITRGQFA 20 (37)
T ss_dssp -CCCHHHHHHHHSSCHHHHH
T ss_pred CCCCHHHHHHHHCcCHHHHH
Confidence 48999999999999999983
No 3
>2al3_A TUG long isoform; TUG UBL1 insulin, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: d.15.1.2
Probab=65.22 E-value=8.2 Score=24.85 Aligned_cols=44 Identities=14% Similarity=0.200 Sum_probs=30.9
Q ss_pred ceEEEEeccCceeEEEEeccCCCchHHHHHHHHHhhhhCCCCCCCce
Q 047875 30 GHFAVYIGEFEKKRFVVPISHLKHPSFQNLLSQAGEEFGFDHPMGVL 76 (92)
Q Consensus 30 G~~aVyVG~~e~~RfvVpv~yL~hP~F~~LL~~aeeEfG~~~~~G~L 76 (92)
|--.+++.. ..+|+.|++. ..-.+.++|++|.+.||++.+...|
T Consensus 9 ~m~v~Vl~~-n~rr~~VKvt--p~t~L~~VL~eaC~K~gl~~~~~~L 52 (90)
T 2al3_A 9 GSAVSVLAP-NGRRHTVKVT--PSTVLLQVLEDTCRRQDFNPSEYDL 52 (90)
T ss_dssp -CCEEEECT-TSCEEEECCC--TTSBHHHHHHHHHHHTTCCGGGCEE
T ss_pred ccEEEEEcC-CCcEEEEEEC--CCCCHHHHHHHHHHHhCCChhhCeE
Confidence 333444444 5789999983 3447889999999999998664444
No 4
>2xko_C PIPX, global nitrogen regulator; transcription, nitrogen assimilation, CRP/FNR superfamily, 2-oxoglutarate, global nitrogen controller; HET: AKG; 2.25A {Synechococcus elongatus} PDB: 2xg8_D*
Probab=46.32 E-value=2.2 Score=27.80 Aligned_cols=9 Identities=44% Similarity=0.910 Sum_probs=7.5
Q ss_pred cCCCchHHH
Q 047875 49 SHLKHPSFQ 57 (92)
Q Consensus 49 ~yL~hP~F~ 57 (92)
.|||||.|-
T Consensus 5 ~YLNHPtFG 13 (89)
T 2xko_C 5 NYLNHPTFG 13 (89)
T ss_dssp CEEEETTTE
T ss_pred ccccCCccc
Confidence 499999884
No 5
>1yu8_X Villin; alpha helix, 3-10 helix, structural protein; 1.45A {Gallus gallus} SCOP: a.14.1.1 PDB: 1qqv_A 1yu5_X 2rjx_A 2rjy_A 1yu7_X 2rjv_A 2rjw_A 3nkj_A 3myc_A 3mya_A 3mye_X 1unc_A
Probab=40.43 E-value=7.2 Score=23.84 Aligned_cols=20 Identities=20% Similarity=0.502 Sum_probs=18.5
Q ss_pred cCCCchHHHHHHHHHhhhhC
Q 047875 49 SHLKHPSFQNLLSQAGEEFG 68 (92)
Q Consensus 49 ~yL~hP~F~~LL~~aeeEfG 68 (92)
.||+.-.|++++.++.+||-
T Consensus 31 ~yLsdedF~~vFgms~~eF~ 50 (67)
T 1yu8_X 31 NHLSDEDFKAVFGMTRSAFA 50 (67)
T ss_dssp GGSCHHHHHHHHSSCHHHHH
T ss_pred hcCCHHHHHHHHCcCHHHHH
Confidence 69999999999999999984
No 6
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=39.55 E-value=18 Score=24.36 Aligned_cols=60 Identities=18% Similarity=0.210 Sum_probs=42.4
Q ss_pred CCCceEEEEeccCceeEEEEeccCC-CchHHHHHHHHHhhhhCCCCCCCceeeeCCHHHHHHhHhc
Q 047875 27 VPKGHFAVYIGEFEKKRFVVPISHL-KHPSFQNLLSQAGEEFGFDHPMGVLTIPCSEQVFFDLTCS 91 (92)
Q Consensus 27 vpkG~~aVyVG~~e~~RfvVpv~yL-~hP~F~~LL~~aeeEfG~~~~~G~L~iPC~~~~F~~vl~~ 91 (92)
.....+.+-||. +||.+..+-| ++|. .+|..++...-++.+.|.+-|-.+...|++||.-
T Consensus 32 ~~~~~V~LNVGG---~~F~T~~~TL~~~P~--S~L~~~~~~~~~~~~~g~yFiDRdp~~F~~ILnf 92 (140)
T 2nz0_B 32 RQDELIVLNVSG---RRFQTWRTTLERYPD--TLLGSTEKEFFFNEDTKEYFFDRDPEVFRCVLNF 92 (140)
T ss_dssp TCCCEEEEEETT---EEEEEEHHHHHTCTT--STTTSGGGGGSEETTTTEEEECSCHHHHHHHHHH
T ss_pred CCCCEEEEEECC---EEEEeeHHHHhcCCC--eeecccCCcccccCCCCeEEEeCCcHHHHHHHHH
Confidence 355788899994 8999987765 3332 2333344444555556899999999999999863
No 7
>1ujs_A Actin-binding LIM protein homologue; VHP domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Homo sapiens} SCOP: a.14.1.1 PDB: 2l3x_A
Probab=36.19 E-value=10 Score=24.37 Aligned_cols=20 Identities=25% Similarity=0.451 Sum_probs=18.7
Q ss_pred cCCCchHHHHHHHHHhhhhC
Q 047875 49 SHLKHPSFQNLLSQAGEEFG 68 (92)
Q Consensus 49 ~yL~hP~F~~LL~~aeeEfG 68 (92)
.||+.-.|++++.++.+||-
T Consensus 46 ~YLSdedF~~vFgMsr~eF~ 65 (88)
T 1ujs_A 46 RHLSQEEFYQVFGMTISEFD 65 (88)
T ss_dssp GGSCTTHHHHHHSSCHHHHT
T ss_pred hcCCHHHHHHHHCcCHHHHH
Confidence 69999999999999999985
No 8
>1qzp_A Dematin; villin headpiece, actin binding domain, protein binding; NMR {Homo sapiens} SCOP: a.14.1.1 PDB: 1zv6_A
Probab=35.53 E-value=6.4 Score=24.01 Aligned_cols=20 Identities=35% Similarity=0.680 Sum_probs=18.3
Q ss_pred cCCCchHHHHHHHHHhhhhC
Q 047875 49 SHLKHPSFQNLLSQAGEEFG 68 (92)
Q Consensus 49 ~yL~hP~F~~LL~~aeeEfG 68 (92)
.||+.-.|++++.++.+||-
T Consensus 32 ~yLsdedF~~vFgmsr~eF~ 51 (68)
T 1qzp_A 32 RHLSAEDFSRVFAMSPEEFG 51 (68)
T ss_dssp GGBCHHHHHHHSSSCHHHHH
T ss_pred hhCCHHHHHHHHCcCHHHHH
Confidence 69999999999999999983
No 9
>2k6m_S Supervillin; SVHP, HP, headpiece, archvillin, actin capping, actin-binding, alternative splicing, calcium, cytoplasm, cytoskeleton, membrane; NMR {Homo sapiens} PDB: 2k6n_A
Probab=34.27 E-value=8 Score=23.58 Aligned_cols=20 Identities=20% Similarity=0.331 Sum_probs=18.7
Q ss_pred cCCCchHHHHHHHHHhhhhC
Q 047875 49 SHLKHPSFQNLLSQAGEEFG 68 (92)
Q Consensus 49 ~yL~hP~F~~LL~~aeeEfG 68 (92)
.||+.-.|++++.++.+||-
T Consensus 31 ~yLsdedF~~vFgmsr~eF~ 50 (67)
T 2k6m_S 31 IYLTDEDFEFALDMTRDEYN 50 (67)
T ss_dssp GGSCHHHHHHHTSSCHHHHT
T ss_pred hhCCHHHHHHHHCcCHHHHH
Confidence 69999999999999999985
No 10
>3n5b_B ASR0485 protein; PII, PIPX, transcription regulator, signal transducer; HET: ADP; 1.90A {Nostoc}
Probab=33.03 E-value=4.8 Score=27.14 Aligned_cols=9 Identities=22% Similarity=0.597 Sum_probs=7.5
Q ss_pred CCCchHHHH
Q 047875 50 HLKHPSFQN 58 (92)
Q Consensus 50 yL~hP~F~~ 58 (92)
|||||.|--
T Consensus 29 YLNHPTFGL 37 (112)
T 3n5b_B 29 YINHPTWGL 37 (112)
T ss_dssp EEEETTTEE
T ss_pred hccCCccch
Confidence 999999843
No 11
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=31.84 E-value=76 Score=19.73 Aligned_cols=58 Identities=16% Similarity=0.179 Sum_probs=40.3
Q ss_pred CceEEEEeccCceeEEEEeccCCC-ch--HHHHHHHHHhhhhC--CCCCCCceeeeCCHHHHHHhHhc
Q 047875 29 KGHFAVYIGEFEKKRFVVPISHLK-HP--SFQNLLSQAGEEFG--FDHPMGVLTIPCSEQVFFDLTCS 91 (92)
Q Consensus 29 kG~~aVyVG~~e~~RfvVpv~yL~-hP--~F~~LL~~aeeEfG--~~~~~G~L~iPC~~~~F~~vl~~ 91 (92)
...+.+-||. ++|.+..+-|. +| .|..+... ..++. .+.+ |.+-|-.+...|++|+.-
T Consensus 5 ~~~v~LNVGG---~~f~t~~~TL~~~p~s~L~~~~~~-~~~~~~~~d~~-~~~fiDRdp~~F~~IL~~ 67 (107)
T 3drz_A 5 SKWVRLNVGG---TYFLTTRQTLCRDPKSFLYRLCQA-DPDLDSDKDET-GAYLIDRDPTYFGPVLNY 67 (107)
T ss_dssp CCEEEEEETT---EEEEEEHHHHTSSTTSHHHHHHTT-CGGGGGGBCTT-SCEEECSCHHHHHHHHHH
T ss_pred CCEEEEEECC---EEEEECHHHHhcCCCcchhHHHhc-CCCCCcCCCCC-ceEEecCChHHHHHHHHH
Confidence 4567888994 89999987775 44 45665432 12332 3333 889999999999999863
No 12
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=31.72 E-value=18 Score=23.86 Aligned_cols=59 Identities=19% Similarity=0.216 Sum_probs=41.4
Q ss_pred CCceEEEEeccCceeEEEEeccCCC-chHHHHHHHHHhhhhCCCCCCCceeeeCCHHHHHHhHhc
Q 047875 28 PKGHFAVYIGEFEKKRFVVPISHLK-HPSFQNLLSQAGEEFGFDHPMGVLTIPCSEQVFFDLTCS 91 (92)
Q Consensus 28 pkG~~aVyVG~~e~~RfvVpv~yL~-hP~F~~LL~~aeeEfG~~~~~G~L~iPC~~~~F~~vl~~ 91 (92)
....+.+-||. +||.+..+-|. +|. .+|..++...-++.+.|.+-|-.+...|+.||.-
T Consensus 11 ~~~~V~LNVGG---~~F~t~~~TL~~~p~--S~L~~~~~~~~~~~~~g~~FiDRdp~~F~~ILnf 70 (124)
T 1s1g_A 11 QDELIVLNVSG---RRFQTWRTTLERYPD--TLLGSTEKEFFFNEDTKEYFFDRDPEVFRCVLNF 70 (124)
T ss_dssp -CCEEEEEETT---EEEEEEHHHHTTSTT--SSTTSSGGGGTBCSSSCSEEECSCHHHHHHHHHH
T ss_pred CCCEEEEEeCC---EEEEEeHHHHhcCCC--ceecccCCcccccCCCCcEEEcCChHHHHHHHHH
Confidence 45678889994 89999887663 332 2333344444455555899999999999999863
No 13
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=31.64 E-value=57 Score=19.31 Aligned_cols=54 Identities=15% Similarity=0.128 Sum_probs=35.9
Q ss_pred EEEEecc-CceeEEEEeccCC--CchHHHHHHHHHhhhhCCCCCCCceeee-CCHHHHHHhHh
Q 047875 32 FAVYIGE-FEKKRFVVPISHL--KHPSFQNLLSQAGEEFGFDHPMGVLTIP-CSEQVFFDLTC 90 (92)
Q Consensus 32 ~aVyVG~-~e~~RfvVpv~yL--~hP~F~~LL~~aeeEfG~~~~~G~L~iP-C~~~~F~~vl~ 90 (92)
+.+.||+ ++.++|-+.-..| ..|.|++++...-.|-. ..|.|| .+.+.|+.++.
T Consensus 11 v~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~-----~~i~l~~~~~~~f~~~l~ 68 (109)
T 2vkp_A 11 VHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVK-----SEIHIPDVEPAAFLILLK 68 (109)
T ss_dssp EEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------C-----CEEEETTSCHHHHHHHHH
T ss_pred EEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCC-----CeEEeCCCCHHHHHHHHH
Confidence 3456664 2358898888888 68999999975433322 468887 68889988875
No 14
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=31.64 E-value=45 Score=20.22 Aligned_cols=48 Identities=17% Similarity=0.171 Sum_probs=35.1
Q ss_pred EEEEeccCceeEEEEeccCC--CchHHHHHHHHHhhhhCCCCCCCceeee---CCHHHHHHhHh
Q 047875 32 FAVYIGEFEKKRFVVPISHL--KHPSFQNLLSQAGEEFGFDHPMGVLTIP---CSEQVFFDLTC 90 (92)
Q Consensus 32 ~aVyVG~~e~~RfvVpv~yL--~hP~F~~LL~~aeeEfG~~~~~G~L~iP---C~~~~F~~vl~ 90 (92)
+.+.||. ++|-+.-..| ..|.|++++... . + +.+.|+ .+.+.|+.++.
T Consensus 25 v~l~v~~---~~~~aHk~vLaa~S~yF~~~f~~~------~-~-~~i~l~~~~~~~~~f~~ll~ 77 (116)
T 2vpk_A 25 CTIVIGE---FQFKAHRNVLASFSEYFGAIYRST------S-E-NNVFLDQSQVKADGFQKLLE 77 (116)
T ss_dssp EEEEETT---EEEEECHHHHHHHCHHHHHHHTTC------C-C-SCEECCTTTCCHHHHHHHHH
T ss_pred EEEEECC---EEEeccHHHHhhcCHHHHHHHcCC------C-C-CeEEeecCCCCHHHHHHHHH
Confidence 3456664 6787777777 579999988654 2 3 578888 78889998875
No 15
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=30.14 E-value=46 Score=20.54 Aligned_cols=51 Identities=14% Similarity=0.208 Sum_probs=37.6
Q ss_pred EEEEeccCceeEEEEeccCC--CchHHHHHHHHHhhhhCCCCCCCceee-e-CCHHHHHHhHh
Q 047875 32 FAVYIGEFEKKRFVVPISHL--KHPSFQNLLSQAGEEFGFDHPMGVLTI-P-CSEQVFFDLTC 90 (92)
Q Consensus 32 ~aVyVG~~e~~RfvVpv~yL--~hP~F~~LL~~aeeEfG~~~~~G~L~i-P-C~~~~F~~vl~ 90 (92)
+.+.||. ++|-+.-..| ..|.|++++...-.| .. ..|.| + .+.+.|+.++.
T Consensus 32 v~l~v~~---~~~~aHk~iLaa~S~~F~~~f~~~~~e----~~-~~i~l~~~~~~~~f~~ll~ 86 (127)
T 1r29_A 32 VVIVVSR---EQFRAHKTVLMACSGLFYSIFTDQLKR----NL-SVINLDPEINPEGFNILLD 86 (127)
T ss_dssp EEEEETT---EEEEECHHHHHHHCHHHHHHHTSTTTT----TC-SEEECCTTSCHHHHHHHHH
T ss_pred EEEEECC---EEEehHHHHHHHhCHHHHHHhcCCccC----CC-CEEEeCCCCCHHHHHHHHH
Confidence 3456664 6787777777 689999999866555 23 68999 4 68889988875
No 16
>3bux_B E3 ubiquitin-protein ligase CBL; TKB, signal transduction, proto-oncogene, complex, ATP-binding, glycoprotein, kinase, membrane, nucleotide-binding; HET: PTR; 1.35A {Homo sapiens} SCOP: a.39.1.7 a.48.1.1 d.93.1.1 PDB: 1yvh_A* 3bun_B* 3buo_B* 3bum_B* 3buw_B* 3ob1_B* 3ob2_B* 3plf_B* 2cbl_A* 1b47_A 3pfv_A*
Probab=30.12 E-value=91 Score=24.36 Aligned_cols=55 Identities=24% Similarity=0.369 Sum_probs=37.0
Q ss_pred HHHHHHHhhh--hhc---cccCCCCceEEE-EeccCceeEEEEeccCCCchHHHHHHHHHhhhh
Q 047875 10 NAKQALRRAF--MAS---EAATVPKGHFAV-YIGEFEKKRFVVPISHLKHPSFQNLLSQAGEEF 67 (92)
Q Consensus 10 ~~k~~l~r~~--s~~---~~~~vpkG~~aV-yVG~~e~~RfvVpv~yL~hP~F~~LL~~aeeEf 67 (92)
.+++.|.+.. ..+ |-+...-|..|+ ||-.+..=.=.|| .|-|++|+|++-.+|-|
T Consensus 254 Ev~~~L~~~~~kpGsYIfR~ScTrlGqwAIgyV~~~~~I~qtip---~nk~l~qal~dg~~eg~ 314 (329)
T 3bux_B 254 EVKARLQKFIHKPGSYIFRLSCTRLGQWAIGYVTADGNILQTIP---HNKPLFQALIDGFREGF 314 (329)
T ss_dssp HHHHHHGGGTTSTTEEEEEECSSSTTSEEEEEECTTSCEEEECC---SSCCHHHHHHHHHHHTS
T ss_pred HHHHHHHHhcCCCCcEEEEeccCccCceEEEEECCCCceeeeCC---CCcHHHHHHHhccccce
Confidence 5677776632 222 466777888887 7765223344444 79999999999998854
No 17
>3pmi_A PWWP domain-containing protein MUM1; structural genomics consortium, SGC, protein binding, nucLeu; HET: UNL; 2.82A {Homo sapiens}
Probab=29.22 E-value=19 Score=24.85 Aligned_cols=29 Identities=45% Similarity=0.631 Sum_probs=25.6
Q ss_pred ceeEEEEeccCCCc---hHHHHHHHHHhhhhC
Q 047875 40 EKKRFVVPISHLKH---PSFQNLLSQAGEEFG 68 (92)
Q Consensus 40 e~~RfvVpv~yL~h---P~F~~LL~~aeeEfG 68 (92)
+++=|-||+.-|+| -.-++|+++|.|+||
T Consensus 47 ekrGi~V~LrrLK~fDC~ek~~L~~rAre~Y~ 78 (134)
T 3pmi_A 47 KMKGFTVSLKSLKHFDCKEKQTLLNQAREDFN 78 (134)
T ss_dssp TSCCEEEEGGGCEETTSTTHHHHHHHHTTTCH
T ss_pred ccCceEeEcccCCCCChHhHHHHHHHHHHHhc
Confidence 67889999998887 467999999999998
No 18
>1y6i_A Mg-chelatase cofactor GUN4; helix-bundle, porphyrin binding, ligand binding protein; 1.78A {Synechocystis SP} SCOP: a.118.1.22 a.261.1.1
Probab=28.71 E-value=3.6 Score=30.67 Aligned_cols=31 Identities=26% Similarity=0.453 Sum_probs=20.8
Q ss_pred ccCCCCceEEEEeccCceeEEEEeccCCCchHHH
Q 047875 24 AATVPKGHFAVYIGEFEKKRFVVPISHLKHPSFQ 57 (92)
Q Consensus 24 ~~~vpkG~~aVyVG~~e~~RfvVpv~yL~hP~F~ 57 (92)
+..+|+||+|..-.- ..-| |=-+.|+||.|.
T Consensus 199 ~l~AP~GHLP~~~~l-rG~~--l~~~ll~hpa~~ 229 (233)
T 1y6i_A 199 DLSAPQGHLPLLNQL-RGVR--VAESLYRHPVWS 229 (233)
T ss_dssp STTSCTTCCSCCCCT-TCTH--HHHHHHTSTHHH
T ss_pred eCCCCCCCCCCcccc-chHH--HHHHHHCCcccc
Confidence 447999999986532 1112 445788999884
No 19
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=28.65 E-value=1.1e+02 Score=23.34 Aligned_cols=53 Identities=9% Similarity=0.218 Sum_probs=33.7
Q ss_pred cCCCCceEEEEeccCceeEEEEeccCCCchHHHHHHHHHhhhhCCCCCCCceeee--CCHHHHHHhHh
Q 047875 25 ATVPKGHFAVYIGEFEKKRFVVPISHLKHPSFQNLLSQAGEEFGFDHPMGVLTIP--CSEQVFFDLTC 90 (92)
Q Consensus 25 ~~vpkG~~aVyVG~~e~~RfvVpv~yL~hP~F~~LL~~aeeEfG~~~~~G~L~iP--C~~~~F~~vl~ 90 (92)
...+.|...|.||+ +. ..-....--.++.+|.|+... .+.+| ++.+++...+.
T Consensus 50 ~g~~P~LavIlVG~-dp----------aS~~Yv~~K~k~c~~vGi~s~--~~~lp~~~se~ell~~I~ 104 (303)
T 4b4u_A 50 TGRTPILATILVGD-DG----------ASATYVRMKGNACRRVGMDSL--KIELPQETTTEQLLAEIE 104 (303)
T ss_dssp HSCCCEEEEEEESC-CH----------HHHHHHHHHHHHHHHTTCEEE--EEEECTTCCHHHHHHHHH
T ss_pred CCCCCcEEEEEeCC-CH----------HHHHHHHHHHHHHHHcCCeEE--EEecCccCCHHHHHHHHH
Confidence 35677999999997 21 011233556677888888764 56666 55566665554
No 20
>3qli_A Coenzyme A transferase; COEN transferase; 1.90A {Yersinia pestis} PDB: 3qlk_A 3s8d_A
Probab=28.12 E-value=33 Score=27.49 Aligned_cols=43 Identities=28% Similarity=0.414 Sum_probs=28.4
Q ss_pred CCCCceEEEEecc---------CceeEEEEeccCCCchHHHHHHHHHhhhhCC
Q 047875 26 TVPKGHFAVYIGE---------FEKKRFVVPISHLKHPSFQNLLSQAGEEFGF 69 (92)
Q Consensus 26 ~vpkG~~aVyVG~---------~e~~RfvVpv~yL~hP~F~~LL~~aeeEfG~ 69 (92)
..|++++-+.|-| .-++|-.-=++ +.||.||+.|.+++++.|+
T Consensus 403 tt~~~~v~~vvTE~Gva~l~G~s~~eRa~~lI~-iAHPdfR~~L~~~A~~~~~ 454 (455)
T 3qli_A 403 TTPRIDTHYIVTEFGAVNLKGLSSTERALRIIE-LAHPDFRDELTQAAKKMHL 454 (455)
T ss_dssp SBCTTTCCEEEETTEEEECTTCCHHHHHHHHHT-TSCHHHHHHHHHHHHHTTC
T ss_pred ccCcccccEEEeccEEEECCCCCHHHHHHHHHH-ccCcchHHHHHHHHHHcCC
Confidence 4577777666643 12333332234 8999999999998888774
No 21
>2bkf_A Zinc-finger protein NBR1 (NEXT to breast cancer 1; PB1 domain, interaction domain, Z finger; 1.56A {Homo sapiens} SCOP: d.15.2.2 PDB: 2g4s_A
Probab=27.62 E-value=1.2e+02 Score=19.23 Aligned_cols=48 Identities=13% Similarity=0.230 Sum_probs=36.0
Q ss_pred EeccCceeEEEEeccCCCchHHHHHHHHHhhhhCC--------CCCCCceeeeCCHHHHH
Q 047875 35 YIGEFEKKRFVVPISHLKHPSFQNLLSQAGEEFGF--------DHPMGVLTIPCSEQVFF 86 (92)
Q Consensus 35 yVG~~e~~RfvVpv~yL~hP~F~~LL~~aeeEfG~--------~~~~G~L~iPC~~~~F~ 86 (92)
|-| +.+||. ++++..+.+.+|-.+-..-||+ |.++-.++|.-+.+..|
T Consensus 13 f~g--e~~rf~--vs~~~~~tweel~~mvk~~f~L~~~~ikY~DEenD~v~i~Sq~E~eE 68 (87)
T 2bkf_A 13 FKN--EIQSFL--VSDPENTTWADIEAMVKVSFDLNTIQIKYLDEENEEVSINSQGEYEE 68 (87)
T ss_dssp ETT--EEEEEE--ESCGGGCCHHHHHHHHHHHHTCSSEEEEEECTTSCEEEECSHHHHHH
T ss_pred EcC--CeeEEE--eccCCCCCHHHHHHHHHHHcCCCceEEEEEcCCCCEEEEecHHHHHH
Confidence 445 578875 5889999999999999999995 34445788887764444
No 22
>1zav_U 50S ribosomal protein L7/L12; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: a.108.1.1 PDB: 1zaw_U 1zax_U 1dd3_C
Probab=27.61 E-value=36 Score=17.49 Aligned_cols=13 Identities=23% Similarity=0.657 Sum_probs=10.5
Q ss_pred HHHHHHHHhhhhC
Q 047875 56 FQNLLSQAGEEFG 68 (92)
Q Consensus 56 F~~LL~~aeeEfG 68 (92)
..+|.+.-||+||
T Consensus 18 l~eLvk~lEe~fG 30 (30)
T 1zav_U 18 LAELVKKLEDKFG 30 (30)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhC
Confidence 4678888899998
No 23
>1vd2_A Protein kinase C, IOTA type; PB1 domain, OPCA motif, APKC, ZIP/P62, MEK5, molecular recognition, transferase; NMR {Homo sapiens} SCOP: d.15.2.2 PDB: 1wmh_A
Probab=27.56 E-value=1e+02 Score=19.29 Aligned_cols=28 Identities=18% Similarity=0.186 Sum_probs=23.8
Q ss_pred ceeEEEEeccCCCchHHHHHHHHHhhhhCCCC
Q 047875 40 EKKRFVVPISHLKHPSFQNLLSQAGEEFGFDH 71 (92)
Q Consensus 40 e~~RfvVpv~yL~hP~F~~LL~~aeeEfG~~~ 71 (92)
+-.|+-||. ...|++|.++-.+-|++..
T Consensus 16 di~~~~v~~----~i~~~~L~~kv~~~~~~~~ 43 (89)
T 1vd2_A 16 DIMITHFEP----SISFEGLCNEVRDMCSFDN 43 (89)
T ss_dssp CEEEEEECT----TCCHHHHHHHHHHHTTCCS
T ss_pred eEEEEECCC----CCCHHHHHHHHHHHhCCCC
Confidence 678999987 4689999999999999863
No 24
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=27.28 E-value=85 Score=19.39 Aligned_cols=48 Identities=19% Similarity=0.364 Sum_probs=35.8
Q ss_pred EEEEeccCceeEEEEeccCCC--chHHHHHHHHHhhhhCCCCCCCceeee--CCHHHHHHhHh
Q 047875 32 FAVYIGEFEKKRFVVPISHLK--HPSFQNLLSQAGEEFGFDHPMGVLTIP--CSEQVFFDLTC 90 (92)
Q Consensus 32 ~aVyVG~~e~~RfvVpv~yL~--hP~F~~LL~~aeeEfG~~~~~G~L~iP--C~~~~F~~vl~ 90 (92)
+.+.||. ++|-+.-..|. .|.|++++... .. ..|.|| .+.+.|+.++.
T Consensus 36 v~l~v~~---~~~~~Hk~vLaa~S~~F~~~f~~~-------~~-~~i~l~~~~~~~~f~~ll~ 87 (129)
T 3ga1_A 36 VSVVVKG---HAFKAHRAVLAASSSYFRDLFNNS-------RS-AVVELPAAVQPQSFQQILS 87 (129)
T ss_dssp EEEEETT---EEEEECHHHHHHHBHHHHHHHHHC-------CC-SEEECCTTCCHHHHHHHHH
T ss_pred eEEEECC---EEEEehHHHHHHcCHHHHHHHcCC-------CC-CEEEECCCCCHHHHHHHHH
Confidence 4566764 67777766664 69999998875 23 689997 88999998875
No 25
>3ezo_A Malonyl COA-acyl carrier protein transacylase; ssgcid, acyl-carrier-protein S-malonyltransferase, acyltransferase, transferase; 2.05A {Burkholderia pseudomallei 1710B}
Probab=26.98 E-value=41 Score=24.79 Aligned_cols=40 Identities=15% Similarity=0.161 Sum_probs=26.9
Q ss_pred ceEEEEeccCceeEEEEeccCCCchHHHHHHHHHhhhhCCC
Q 047875 30 GHFAVYIGEFEKKRFVVPISHLKHPSFQNLLSQAGEEFGFD 70 (92)
Q Consensus 30 G~~aVyVG~~e~~RfvVpv~yL~hP~F~~LL~~aeeEfG~~ 70 (92)
...-|+-|++ .+..=+--+.+++|.|++.++++.+.+|++
T Consensus 10 ~~~f~F~GQG-sQ~~gMg~~L~~~p~fr~~~~~~~~~lg~~ 49 (318)
T 3ezo_A 10 KFAFVFPGQG-SQSVGMLNAFADVAVVRETLDEASDALGQD 49 (318)
T ss_dssp CEEEEECCTT-CCCTTTTGGGTTCHHHHHHHHHHHHHHSSC
T ss_pred CeEEEECCcc-hhhhhHHHHHhhCHHHHHHHHHHHHHhCCC
Confidence 4566777763 222222223338999999999999999875
No 26
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=26.61 E-value=1.2e+02 Score=22.75 Aligned_cols=51 Identities=14% Similarity=0.249 Sum_probs=35.1
Q ss_pred CCceEEEEeccCceeEEEEeccCCCchHHHHHHHHHhhhhCCCCCCCceeee--CCHHHHHHhHhc
Q 047875 28 PKGHFAVYIGEFEKKRFVVPISHLKHPSFQNLLSQAGEEFGFDHPMGVLTIP--CSEQVFFDLTCS 91 (92)
Q Consensus 28 pkG~~aVyVG~~e~~RfvVpv~yL~hP~F~~LL~~aeeEfG~~~~~G~L~iP--C~~~~F~~vl~~ 91 (92)
+.|...|.||+ +. ..-....--.++.+|.|+... .+.+| ++.+.+...+..
T Consensus 33 ~P~Lavilvg~-dp----------aS~~Yv~~k~k~~~~~Gi~~~--~~~lp~~~s~~ell~~I~~ 85 (285)
T 3p2o_A 33 ESCLAVILVGD-NP----------ASQTYVKSKAKACEECGIKSL--VYHLNENITQNELLALINT 85 (285)
T ss_dssp CCEEEEEEESC-CH----------HHHHHHHHHHHHHHHHTCEEE--EEEECTTCCHHHHHHHHHH
T ss_pred CCeEEEEEeCC-CH----------HHHHHHHHHHHHHHHcCCeEE--EEECCCCCCHHHHHHHHHH
Confidence 66899999997 21 011234556778889998865 68888 777777776643
No 27
>1wy3_A Villin; structural protein; HET: NLE; 0.95A {Synthetic} PDB: 1wy4_A 1yri_A* 1yrf_A* 2f4k_A* 1vii_A 3trv_A* 3trw_A 3tjw_B* 3trv_B* 3try_A* 2ppz_A 2jm0_A* 3tjw_A* 3iur_B*
Probab=25.75 E-value=18 Score=19.36 Aligned_cols=18 Identities=17% Similarity=0.431 Sum_probs=14.2
Q ss_pred CCchHHHHHHHHHhhhhC
Q 047875 51 LKHPSFQNLLSQAGEEFG 68 (92)
Q Consensus 51 L~hP~F~~LL~~aeeEfG 68 (92)
|+.-.|++++.++.+||-
T Consensus 1 Lsd~dF~~vFgmsr~eF~ 18 (35)
T 1wy3_A 1 LSDEDFKAVFGMTRSAFA 18 (35)
T ss_dssp CCHHHHHHHHSSCHHHHH
T ss_pred CCHHHHHHHHCCCHHHHH
Confidence 566788888888888873
No 28
>1wj6_A KIAA0049 protein, RSGI RUH-024; PB1 domain, protein binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: d.15.2.2
Probab=23.17 E-value=1.6e+02 Score=19.17 Aligned_cols=49 Identities=12% Similarity=0.226 Sum_probs=36.2
Q ss_pred EEeccCceeEEEEeccCCCchHHHHHHHHHhhhhCC--------CCCCCceeeeCCHHHHH
Q 047875 34 VYIGEFEKKRFVVPISHLKHPSFQNLLSQAGEEFGF--------DHPMGVLTIPCSEQVFF 86 (92)
Q Consensus 34 VyVG~~e~~RfvVpv~yL~hP~F~~LL~~aeeEfG~--------~~~~G~L~iPC~~~~F~ 86 (92)
-|.| +.+||. ++++..+.+.+|-.+-..-||+ |.++-.|+|.-+.+..|
T Consensus 20 ~f~g--e~~rF~--Vs~~~~~tweel~~mvk~~f~L~~~~IkY~DEenD~V~i~Sq~E~eE 76 (101)
T 1wj6_A 20 TFKN--EIQSFL--VSDPENTTWADIEAMVKVSFDLNTIQIKYLDEENEEVSINSQGEYEE 76 (101)
T ss_dssp EETT--EEEEEE--ESCTTTSCHHHHHHHHHHHHCCSSBCCEEECTTSCEECCCSHHHHHH
T ss_pred EEcC--CeeEEE--ecCCCCCCHHHHHHHHHHHcCCCceEEEEecCCCCEEEEecHHHHHH
Confidence 4556 588885 5899999999999999999995 33444678877654443
No 29
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=21.84 E-value=1.1e+02 Score=18.35 Aligned_cols=52 Identities=17% Similarity=0.195 Sum_probs=34.6
Q ss_pred EEEEeccCceeEEEEeccCC--CchHHHHHHHHHhhhhCCCCCCCceeee-CCHHHHHHhHh
Q 047875 32 FAVYIGEFEKKRFVVPISHL--KHPSFQNLLSQAGEEFGFDHPMGVLTIP-CSEQVFFDLTC 90 (92)
Q Consensus 32 ~aVyVG~~e~~RfvVpv~yL--~hP~F~~LL~~aeeEfG~~~~~G~L~iP-C~~~~F~~vl~ 90 (92)
+.+.||. ++|-+.-..| ..|.|++++...-.|- .. ..|.++ .+.+.|+.++.
T Consensus 28 v~l~v~~---~~~~aHk~vLaa~S~~F~~~f~~~~~e~---~~-~~i~l~~~~~~~f~~ll~ 82 (120)
T 2if5_A 28 VVILVEG---REFPTHRSVLAACSQYFKKLFTSGAVVD---QQ-NVYEIDFVSAEALTALMD 82 (120)
T ss_dssp EEEEETT---EEEEECHHHHHHHCHHHHHHHHC--------CC-SEEECCSSCHHHHHHHHH
T ss_pred eEEEECC---EEEeHHHHHHHHhCHHHHHHhcCCcccc---CC-ceEEeCCCCHHHHHHHHH
Confidence 3455664 6787777777 4799999987543332 23 578888 58889988875
No 30
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=21.66 E-value=2.4e+02 Score=21.11 Aligned_cols=52 Identities=23% Similarity=0.321 Sum_probs=35.2
Q ss_pred CCCceEEEEeccCceeEEEEeccCCCchHHHHHHHHHhhhhCCCCCCCceeee--CCHHHHHHhHhc
Q 047875 27 VPKGHFAVYIGEFEKKRFVVPISHLKHPSFQNLLSQAGEEFGFDHPMGVLTIP--CSEQVFFDLTCS 91 (92)
Q Consensus 27 vpkG~~aVyVG~~e~~RfvVpv~yL~hP~F~~LL~~aeeEfG~~~~~G~L~iP--C~~~~F~~vl~~ 91 (92)
...|...|.||+ +. ..-....--.++.||.|+... .+.+| ++.++++..+..
T Consensus 32 ~~P~LavilvG~-dp----------aS~~Yv~~k~k~~~~~Gi~~~--~~~lp~~~s~~ell~~I~~ 85 (288)
T 1b0a_A 32 RAPGLAVVLVGS-NP----------ASQIYVASKRKACEEVGFVSR--SYDLPETTSEAELLELIDT 85 (288)
T ss_dssp CCCEEEEEEESC-CH----------HHHHHHHHHHHHHHHHTCEEC--CEEECTTCCHHHHHHHHHH
T ss_pred CCceEEEEEeCC-Ch----------hHHHHHHHHHHHHHHcCCEEE--EEECCCCCCHHHHHHHHHH
Confidence 557899999997 32 122334556778899999876 57887 456666666543
No 31
>1w8x_N Protein P31, protein C, GPC; virus, P3 major capsid protein, P30 TAPE measure, P31 penton protein, P16 membrane protein; 4.20A {Enterobacteria phage PRD1} SCOP: i.6.1.1
Probab=21.16 E-value=19 Score=24.29 Aligned_cols=30 Identities=27% Similarity=0.469 Sum_probs=18.3
Q ss_pred CCCCceEEEEeccCceeEEE----------EeccCCCchHHH
Q 047875 26 TVPKGHFAVYIGEFEKKRFV----------VPISHLKHPSFQ 57 (92)
Q Consensus 26 ~vpkG~~aVyVG~~e~~Rfv----------Vpv~yL~hP~F~ 57 (92)
.-.+||+|+.|-. +-+|+ ||+-+||.|.-|
T Consensus 84 AG~QGYfPlL~~~--~~KFv~~~~~~GKks~P~~FlNF~IA~ 123 (126)
T 1w8x_N 84 AGKQGYFPLLVPG--RAKFVARHLGSGKKSVPLFFLNFTIAQ 123 (126)
T ss_dssp CCCCSSCCEEECC--SSSSEEEEEEEESSCCCCSCCC-----
T ss_pred CCCcccceeeccc--hhhhhhhhhcCCCcceeeEEEeceeee
Confidence 3458999999963 44454 688899888644
No 32
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=21.05 E-value=12 Score=23.87 Aligned_cols=54 Identities=15% Similarity=0.244 Sum_probs=32.9
Q ss_pred EEEEeccCceeEEEEeccCC-CchHHHHHHHHHhhhhCCCCCCCceeeeCCHHHHHHhHh
Q 047875 32 FAVYIGEFEKKRFVVPISHL-KHPSFQNLLSQAGEEFGFDHPMGVLTIPCSEQVFFDLTC 90 (92)
Q Consensus 32 ~aVyVG~~e~~RfvVpv~yL-~hP~F~~LL~~aeeEfG~~~~~G~L~iPC~~~~F~~vl~ 90 (92)
+.+-||. +||.+..+-| ++|. .+|..++...-++.+.|.+-|-.+...|.+||.
T Consensus 2 V~LNVGG---~~f~t~~~TL~~~p~--s~L~~~~~~~~~~~~~~~~FiDRdp~~F~~ILn 56 (105)
T 1nn7_A 2 IVLNVSG---TRFQTWQDTLERYPD--TLLGSSERDFFYHPETQQYFFDRDPDIFRHILN 56 (105)
T ss_dssp EEEEETT---EEEEECHHHHHTSCS--SSTTSGGGGGGEEGGGTEEEECSCTTTHHHHHH
T ss_pred EEEEECC---EEEEEeHHHHhcCCC--ccccccCCcccccCCCCcEEEeCCcHHHHHHHH
Confidence 3456773 7888876654 2231 122223333334444488999999999999886
No 33
>3eh7_A 4-hydroxybutyrate COA-transferase; citrate lyase, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.05A {Porphyromonas gingivalis}
Probab=20.80 E-value=53 Score=25.84 Aligned_cols=18 Identities=33% Similarity=0.798 Sum_probs=13.8
Q ss_pred CCchHHHHHHHH-HhhhhC
Q 047875 51 LKHPSFQNLLSQ-AGEEFG 68 (92)
Q Consensus 51 L~hP~F~~LL~~-aeeEfG 68 (92)
+.||.|++.|.+ |++.||
T Consensus 416 iAhpdfr~~L~~~a~~~~~ 434 (434)
T 3eh7_A 416 IAHPDFREELTKHLRKRFG 434 (434)
T ss_dssp TSCHHHHHHHHHHHHHHHC
T ss_pred CCCCCcHHHHHHHHHHhhC
Confidence 999999997765 455565
Done!