Query 047875
Match_columns 92
No_of_seqs 112 out of 632
Neff 4.8
Searched_HMMs 13730
Date Mon Mar 25 06:34:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047875.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/047875hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1unda_ a.14.1.1 (A:) Advillin 63.9 0.9 6.6E-05 23.6 0.5 18 50-67 1-18 (36)
2 d2bkfa1 d.15.2.2 (A:1-85) Next 57.9 11 0.00081 22.4 5.0 50 33-85 8-65 (85)
3 d1y6ia2 a.261.1.1 (A:83-233) M 52.4 0.4 2.9E-05 32.0 -2.8 32 24-58 117-148 (151)
4 d1tjya_ c.93.1.1 (A:) AI-2 rec 47.3 11 0.00081 24.0 4.0 31 40-70 2-35 (316)
5 d1whza_ d.50.3.2 (A:) Hypothet 44.9 21 0.0016 19.8 4.6 51 12-63 8-60 (70)
6 d1y74b1 a.194.1.1 (B:83-132) P 44.4 4 0.00029 22.5 1.1 20 49-68 26-49 (50)
7 d1yu5x1 a.14.1.1 (X:10-76) Vil 41.8 3.1 0.00023 24.1 0.4 20 49-68 31-50 (67)
8 d1nn7a_ d.42.1.2 (A:) Potassiu 41.3 1.5 0.00011 26.7 -1.2 55 32-91 2-57 (105)
9 d1a4ia2 c.58.1.2 (A:2-126) Tet 39.3 34 0.0025 20.7 5.3 53 26-91 32-86 (125)
10 d1ip9a_ d.15.2.2 (A:) Bud emer 37.0 26 0.0019 19.9 4.2 46 34-84 17-70 (85)
11 d1qusa_ d.2.1.6 (A:) 36 kDa so 36.5 11 0.0008 27.2 2.8 25 48-72 13-37 (322)
12 d1ujsa_ a.14.1.1 (A:) Actin-bi 35.5 4.9 0.00036 24.4 0.6 20 49-68 46-65 (88)
13 d1qzpa_ a.14.1.1 (A:) Dematin 33.6 3.4 0.00025 24.0 -0.4 20 49-68 32-51 (68)
14 d1yu8x1 a.14.1.1 (X:42-76) Vil 30.6 6.3 0.00046 20.0 0.4 17 51-67 1-17 (35)
15 d2r85a1 c.30.1.8 (A:1-99) 5-fo 28.7 0.37 2.7E-05 30.4 -5.8 25 24-48 64-88 (99)
16 d2c35b2 d.230.1.1 (B:1-77) N-t 27.6 46 0.0034 18.2 4.1 27 42-68 9-35 (77)
17 d1t2da2 d.162.1.1 (A:151-315) 26.5 44 0.0032 20.4 4.3 32 32-66 126-157 (165)
18 d1mlaa1 c.19.1.1 (A:3-127,A:19 24.6 11 0.00079 25.0 0.9 20 51-70 22-41 (235)
19 d1dkgd1 c.55.1.1 (D:3-185) Hea 23.8 21 0.0016 22.2 2.2 40 47-86 109-148 (183)
20 d1dt9a1 c.55.4.2 (A:143-276) M 23.0 27 0.002 22.0 2.7 21 45-65 111-131 (134)
21 d2hyja2 a.121.1.1 (A:83-200) P 23.0 21 0.0015 20.5 1.9 33 6-38 2-34 (118)
22 d2al3a1 d.15.1.2 (A:10-85) Tet 22.9 63 0.0046 18.5 4.1 35 40-76 9-43 (76)
23 d2pd1a1 d.58.4.11 (A:1-100) Hy 22.7 31 0.0023 19.4 2.7 53 10-65 19-80 (100)
24 d2pbza1 c.30.1.8 (A:4-99) 5-fo 22.7 0.56 4.1E-05 29.4 -5.7 25 24-48 59-83 (96)
25 d1b0aa2 c.58.1.2 (A:2-122) Tet 21.8 78 0.0057 18.8 7.1 53 26-91 30-84 (121)
26 d3kvta_ d.42.1.2 (A:) akv3.1 v 21.5 5.1 0.00037 24.0 -1.3 55 31-91 3-60 (103)
27 d1pvva1 c.78.1.1 (A:1-150) Orn 21.4 24 0.0018 22.1 2.2 18 50-68 131-150 (150)
28 d3buxb3 d.93.1.1 (B:264-351) C 21.0 36 0.0026 20.3 2.7 40 25-67 33-73 (88)
No 1
>d1unda_ a.14.1.1 (A:) Advillin {Human (Homo sapiens) [TaxId: 9606]}
Probab=63.95 E-value=0.9 Score=23.58 Aligned_cols=18 Identities=17% Similarity=0.349 Sum_probs=16.8
Q ss_pred CCCchHHHHHHHHHhhhh
Q 047875 50 HLKHPSFQNLLSQAGEEF 67 (92)
Q Consensus 50 yL~hP~F~~LL~~aeeEf 67 (92)
||+.-.|++++.++.+||
T Consensus 1 yLsd~dF~~vFgmsr~eF 18 (36)
T d1unda_ 1 YLSEQDFVSVFGITRGQF 18 (36)
T ss_dssp CCCHHHHHHHHSSCHHHH
T ss_pred CCCHHHHHHHHCcCHHHH
Confidence 899999999999999998
No 2
>d2bkfa1 d.15.2.2 (A:1-85) Next to BRCA1 gene 1 protein, NBR1 (KIAA0049) {Human (Homo sapiens) [TaxId: 9606]}
Probab=57.91 E-value=11 Score=22.40 Aligned_cols=50 Identities=14% Similarity=0.218 Sum_probs=35.9
Q ss_pred EEEeccCceeEEEEeccCCCchHHHHHHHHHhhhhCC--------CCCCCceeeeCCHHHH
Q 047875 33 AVYIGEFEKKRFVVPISHLKHPSFQNLLSQAGEEFGF--------DHPMGVLTIPCSEQVF 85 (92)
Q Consensus 33 aVyVG~~e~~RfvVpv~yL~hP~F~~LL~~aeeEfG~--------~~~~G~L~iPC~~~~F 85 (92)
-|..|+ +..||.++.. +++.|.+|..+-+.-||. +.++--++|.|+.+.=
T Consensus 8 Kvtf~~-dt~RF~ls~~--~~~~~~~L~~~i~~rf~l~~~~lkY~Ddd~e~v~l~~d~dl~ 65 (85)
T d2bkfa1 8 NVTFKN-EIQSFLVSDP--ENTTWADIEAMVKVSFDLNTIQIKYLDEENEEVSINSQGEYE 65 (85)
T ss_dssp EEEETT-EEEEEEESCG--GGCCHHHHHHHHHHHHTCSSEEEEEECTTSCEEEECSHHHHH
T ss_pred EEEECC-ceEEEEecCC--CCCcHHHHHHHHHHhcCcccceEEEEcCCCCEEEEecHHHHH
Confidence 344455 7999998543 467899999999998885 3343468899997643
No 3
>d1y6ia2 a.261.1.1 (A:83-233) Mg-chelatase cofactor Gun4 {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=52.35 E-value=0.4 Score=32.00 Aligned_cols=32 Identities=25% Similarity=0.446 Sum_probs=20.1
Q ss_pred ccCCCCceEEEEeccCceeEEEEeccCCCchHHHH
Q 047875 24 AATVPKGHFAVYIGEFEKKRFVVPISHLKHPSFQN 58 (92)
Q Consensus 24 ~~~vpkG~~aVyVG~~e~~RfvVpv~yL~hP~F~~ 58 (92)
+..+|+||+|+.-.- ..-| +=-+.|+||.|.+
T Consensus 117 ~l~AP~GHLP~~~~l-rG~~--~~~~l~~h~~~~~ 148 (151)
T d1y6ia2 117 DLSAPQGHLPLLNQL-RGVR--VAESLYRHPVWSQ 148 (151)
T ss_dssp STTSCTTCCSCCCCT-TCTH--HHHHHHTSTHHHH
T ss_pred cCCCCCCCCCccchh-hhHH--HHHHHHcCcchhh
Confidence 457999999985421 1111 2234789998864
No 4
>d1tjya_ c.93.1.1 (A:) AI-2 receptor LsrB {Salmonella typhi [TaxId: 90370]}
Probab=47.32 E-value=11 Score=23.97 Aligned_cols=31 Identities=19% Similarity=0.192 Sum_probs=24.2
Q ss_pred ceeEEEEeccCCCchHHHHHHHH---HhhhhCCC
Q 047875 40 EKKRFVVPISHLKHPSFQNLLSQ---AGEEFGFD 70 (92)
Q Consensus 40 e~~RfvVpv~yL~hP~F~~LL~~---aeeEfG~~ 70 (92)
..+|..+=+..++||.|+.+.+- +++|+|++
T Consensus 2 ~~~kI~~i~~~~~npf~~~~~~g~~~~a~~~G~~ 35 (316)
T d1tjya_ 2 SAERIAFIPKLVGVGFFTSGGNGAQEAGKALGID 35 (316)
T ss_dssp CCCEEEEECSSSSSHHHHHHHHHHHHHHHHHTCE
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHHHHHcCCE
Confidence 45777777889999999998655 45678874
No 5
>d1whza_ d.50.3.2 (A:) Hypothetical protein TTHA1913 {Thermus thermophilus [TaxId: 274]}
Probab=44.92 E-value=21 Score=19.76 Aligned_cols=51 Identities=22% Similarity=0.362 Sum_probs=31.5
Q ss_pred HHHHHhhhhhccccCCCCceEEEEeccCceeEEEEecc--CCCchHHHHHHHHH
Q 047875 12 KQALRRAFMASEAATVPKGHFAVYIGEFEKKRFVVPIS--HLKHPSFQNLLSQA 63 (92)
Q Consensus 12 k~~l~r~~s~~~~~~vpkG~~aVyVG~~e~~RfvVpv~--yL~hP~F~~LL~~a 63 (92)
|+++|.....+....-.+|-...|.-+ +.++.+||.. =|.-...++.|++|
T Consensus 8 kelik~L~~~Gf~~~rqkGSH~~~~~~-~~~~~~v~~~~kei~~gtl~~Ilkqa 60 (70)
T d1whza_ 8 EEVARKLRRLGFVERMAKGGHRLYTHP-DGRIVVVPFHSGELPKGTFKRILRDA 60 (70)
T ss_dssp HHHHHHHHHTTCEEEEEETTEEEEECT-TSCEEEEECSSSSCCHHHHHHHHHHT
T ss_pred HHHHHHHHHCCcEEeccCCceeEEEcC-CCCEEEcCCCCCccCHHHHHHHHHHh
Confidence 444444444333222235767777755 5667777775 37778888888887
No 6
>d1y74b1 a.194.1.1 (B:83-132) Peripheral plasma membrane protein cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.41 E-value=4 Score=22.48 Aligned_cols=20 Identities=35% Similarity=0.541 Sum_probs=15.2
Q ss_pred cCCCchHHHHHHHH----HhhhhC
Q 047875 49 SHLKHPSFQNLLSQ----AGEEFG 68 (92)
Q Consensus 49 ~yL~hP~F~~LL~~----aeeEfG 68 (92)
..|+.|.||+||.- |.+-||
T Consensus 26 ~lL~~PH~~aLL~aHD~VA~k~Y~ 49 (50)
T d1y74b1 26 RILTQPHFMALLQTHDVVAHEVYS 49 (50)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhCHHHHHHHHHHHHHHHHhcc
Confidence 35789999999975 556666
No 7
>d1yu5x1 a.14.1.1 (X:10-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=41.76 E-value=3.1 Score=24.07 Aligned_cols=20 Identities=20% Similarity=0.502 Sum_probs=18.4
Q ss_pred cCCCchHHHHHHHHHhhhhC
Q 047875 49 SHLKHPSFQNLLSQAGEEFG 68 (92)
Q Consensus 49 ~yL~hP~F~~LL~~aeeEfG 68 (92)
.||+.-.|++++.++.+||-
T Consensus 31 ~yLsd~dF~~vFgms~~eF~ 50 (67)
T d1yu5x1 31 NHLSDEDFKAVFGMTRSAFA 50 (67)
T ss_dssp GGSCHHHHHHHHSSCHHHHH
T ss_pred hhCCHHHHHHHHCcCHHHHH
Confidence 69999999999999999983
No 8
>d1nn7a_ d.42.1.2 (A:) Potassium channel kv4.2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=41.34 E-value=1.5 Score=26.65 Aligned_cols=55 Identities=15% Similarity=0.207 Sum_probs=36.8
Q ss_pred EEEEeccCceeEEEEeccCC-CchHHHHHHHHHhhhhCCCCCCCceeeeCCHHHHHHhHhc
Q 047875 32 FAVYIGEFEKKRFVVPISHL-KHPSFQNLLSQAGEEFGFDHPMGVLTIPCSEQVFFDLTCS 91 (92)
Q Consensus 32 ~aVyVG~~e~~RfvVpv~yL-~hP~F~~LL~~aeeEfG~~~~~G~L~iPC~~~~F~~vl~~ 91 (92)
+.+-||. ++|.+..+-| ++|.. +|.+......++.+.|.+-|--|...|++||.-
T Consensus 2 I~LNVGG---~~f~t~~~TL~~~p~s--~l~~~~~~~~~~~~~~~~FiDRdp~~F~~IL~y 57 (105)
T d1nn7a_ 2 IVLNVSG---TRFQTWQDTLERYPDT--LLGSSERDFFYHPETQQYFFDRDPDIFRHILNF 57 (105)
T ss_dssp EEEEETT---EEEEECHHHHHTSCSS--STTSGGGGGGEEGGGTEEEECSCTTTHHHHHHH
T ss_pred EEEEECC---EEEEEeHHHHhcCCCC--CccccccccCcCCCCCcEEEeCCHHHHHHHHHH
Confidence 4567884 8999988866 45531 122333333444455899999999999999863
No 9
>d1a4ia2 c.58.1.2 (A:2-126) Tetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.29 E-value=34 Score=20.68 Aligned_cols=53 Identities=17% Similarity=0.275 Sum_probs=34.9
Q ss_pred CCCCceEEEEeccCceeEEEEeccCCCchHHHHHHHHHhhhhCCCCCCCceeee--CCHHHHHHhHhc
Q 047875 26 TVPKGHFAVYIGEFEKKRFVVPISHLKHPSFQNLLSQAGEEFGFDHPMGVLTIP--CSEQVFFDLTCS 91 (92)
Q Consensus 26 ~vpkG~~aVyVG~~e~~RfvVpv~yL~hP~F~~LL~~aeeEfG~~~~~G~L~iP--C~~~~F~~vl~~ 91 (92)
.++.+...|+||+ +. ..-.....-.+++++.|.... .+.+| ++.+.+...+..
T Consensus 32 g~~P~LavIlvg~-d~----------aS~~Yv~~k~k~a~~~Gi~~~--~~~l~~~~~e~el~~~I~~ 86 (125)
T d1a4ia2 32 GFTPRLAILQVGN-RD----------DSNLYINVKLKAAEEIGIKAT--HIKLPRTTTESEVMKYITS 86 (125)
T ss_dssp TCCCEEEEEEESC-CH----------HHHHHHHHHHHHHHHHTCEEE--EEEECTTCCHHHHHHHHHH
T ss_pred CCCceEEEEEcCC-Ch----------hHHHHHHHHHHHHHhccceEE--EEecCcchhHHHHHHHHHH
Confidence 4455788999997 32 112455677888899998764 57777 445566665543
No 10
>d1ip9a_ d.15.2.2 (A:) Bud emergence mediator Bemp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=37.04 E-value=26 Score=19.95 Aligned_cols=46 Identities=13% Similarity=0.143 Sum_probs=32.2
Q ss_pred EEeccCceeEEEEeccCCCchHHHHHHHHHhhhhCC-------C-CCCCceeeeCCHHH
Q 047875 34 VYIGEFEKKRFVVPISHLKHPSFQNLLSQAGEEFGF-------D-HPMGVLTIPCSEQV 84 (92)
Q Consensus 34 VyVG~~e~~RfvVpv~yL~hP~F~~LL~~aeeEfG~-------~-~~~G~L~iPC~~~~ 84 (92)
++-++ +..||.||.+ ..|.+|.++-++-|+- . .++..++|.|+.+.
T Consensus 17 v~~~~-D~~~~~l~~~----it~~dL~~kI~~rf~~~~~~lkY~Dedgd~v~i~sD~Dl 70 (85)
T d1ip9a_ 17 FYYKD-DIFALMLKGD----TTYKELRSKIAPRIDTDNFKLQTKLFDGSGEEIKTDSQV 70 (85)
T ss_dssp ECBTT-CCEEEEECSC----CCHHHHHHHHHHHHTSSCEEEEECCSSSCCSCCCSHHHH
T ss_pred EEECC-cEEEEEeCCC----CCHHHHHHHHHHHhCCCceEEEEEcCCCCEEEEeCHHHH
Confidence 34465 8999999865 4489999998888872 2 23235788888654
No 11
>d1qusa_ d.2.1.6 (A:) 36 kDa soluble lytic transglycosylase, SLT35 {Escherichia coli [TaxId: 562]}
Probab=36.53 E-value=11 Score=27.17 Aligned_cols=25 Identities=20% Similarity=0.398 Sum_probs=22.2
Q ss_pred ccCCCchHHHHHHHHHhhhhCCCCC
Q 047875 48 ISHLKHPSFQNLLSQAGEEFGFDHP 72 (92)
Q Consensus 48 v~yL~hP~F~~LL~~aeeEfG~~~~ 72 (92)
-+|.+||.+++++++..+++||+.+
T Consensus 13 ~dya~~p~v~~Fi~~la~~~G~s~~ 37 (322)
T d1qusa_ 13 GDFANNPNAQQFIDKMVNKHGFDRQ 37 (322)
T ss_dssp STTTTCHHHHHHHHHHHHHHCCCHH
T ss_pred CCcccCHHHHHHHHHHHHHhCCCHH
Confidence 3699999999999999999999853
No 12
>d1ujsa_ a.14.1.1 (A:) Actin-binding LIM protein homologue KIAA0843 {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.52 E-value=4.9 Score=24.40 Aligned_cols=20 Identities=25% Similarity=0.451 Sum_probs=18.6
Q ss_pred cCCCchHHHHHHHHHhhhhC
Q 047875 49 SHLKHPSFQNLLSQAGEEFG 68 (92)
Q Consensus 49 ~yL~hP~F~~LL~~aeeEfG 68 (92)
.||++-.|++++.++.+||-
T Consensus 46 ~YLSdedF~~vFgMsr~eF~ 65 (88)
T d1ujsa_ 46 RHLSQEEFYQVFGMTISEFD 65 (88)
T ss_dssp GGSCTTHHHHHHSSCHHHHT
T ss_pred hcCCHHHHHHHHCcCHHHHH
Confidence 69999999999999999985
No 13
>d1qzpa_ a.14.1.1 (A:) Dematin {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.65 E-value=3.4 Score=24.01 Aligned_cols=20 Identities=35% Similarity=0.680 Sum_probs=18.3
Q ss_pred cCCCchHHHHHHHHHhhhhC
Q 047875 49 SHLKHPSFQNLLSQAGEEFG 68 (92)
Q Consensus 49 ~yL~hP~F~~LL~~aeeEfG 68 (92)
.||+.-.|++++.++.+||-
T Consensus 32 ~yLsd~dF~~vFgms~~eF~ 51 (68)
T d1qzpa_ 32 RHLSAEDFSRVFAMSPEEFG 51 (68)
T ss_dssp GGBCHHHHHHHSSSCHHHHH
T ss_pred hhCCHHHHHHHHCcCHHHHH
Confidence 79999999999999999983
No 14
>d1yu8x1 a.14.1.1 (X:42-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=30.58 E-value=6.3 Score=19.98 Aligned_cols=17 Identities=18% Similarity=0.446 Sum_probs=14.2
Q ss_pred CCchHHHHHHHHHhhhh
Q 047875 51 LKHPSFQNLLSQAGEEF 67 (92)
Q Consensus 51 L~hP~F~~LL~~aeeEf 67 (92)
|+.-.|++++.++.+||
T Consensus 1 Lsd~dF~~vfgmsr~eF 17 (35)
T d1yu8x1 1 LSDEDFKAVFGMTRSAF 17 (35)
T ss_dssp SCHHHHHHHHSSCHHHH
T ss_pred CCHHHHHHHHCCCHHHH
Confidence 56778999999988887
No 15
>d2r85a1 c.30.1.8 (A:1-99) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Pyrococcus furiosus [TaxId: 2261]}
Probab=28.67 E-value=0.37 Score=30.37 Aligned_cols=25 Identities=32% Similarity=0.468 Sum_probs=17.6
Q ss_pred ccCCCCceEEEEeccCceeEEEEec
Q 047875 24 AATVPKGHFAVYIGEFEKKRFVVPI 48 (92)
Q Consensus 24 ~~~vpkG~~aVyVG~~e~~RfvVpv 48 (92)
.--+|.|.|++|+|-+.-+.|-||+
T Consensus 64 ~I~IPhgSfv~Y~G~d~ie~~~VP~ 88 (99)
T d2r85a1 64 AVVVPTGSFVAHLGIELVENMKVPY 88 (99)
T ss_dssp EEECCCTTHHHHHCHHHHHTCCSCB
T ss_pred EEEecCCCEEEEEcHHHHhcCCCCc
Confidence 4569999999999962223366664
No 16
>d2c35b2 d.230.1.1 (B:1-77) N-terminal, heterodimerisation domain of RBP7 (RpoE) {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.56 E-value=46 Score=18.17 Aligned_cols=27 Identities=4% Similarity=-0.031 Sum_probs=23.6
Q ss_pred eEEEEeccCCCchHHHHHHHHHhhhhC
Q 047875 42 KRFVVPISHLKHPSFQNLLSQAGEEFG 68 (92)
Q Consensus 42 ~RfvVpv~yL~hP~F~~LL~~aeeEfG 68 (92)
....||.++|+.++-+.|.++..+.|.
T Consensus 9 d~v~i~P~~~~~~~~~~i~~~L~~~~e 35 (77)
T d2c35b2 9 HEILLHPRYFGPNLLNTVKQKLFTEVE 35 (77)
T ss_dssp EEEEECGGGCCSCHHHHHHHHHHHHHT
T ss_pred EEEEECHHHhCccHHHHHHHHHHHHhC
Confidence 567899999999999999999988773
No 17
>d1t2da2 d.162.1.1 (A:151-315) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=26.51 E-value=44 Score=20.37 Aligned_cols=32 Identities=19% Similarity=0.221 Sum_probs=22.1
Q ss_pred EEEEeccCceeEEEEeccCCCchHHHHHHHHHhhh
Q 047875 32 FAVYIGEFEKKRFVVPISHLKHPSFQNLLSQAGEE 66 (92)
Q Consensus 32 ~aVyVG~~e~~RfvVpv~yL~hP~F~~LL~~aeeE 66 (92)
+||-+|. +.-.-++++. |+ +.=|++|++|++|
T Consensus 126 ~Pv~lg~-~Gv~~i~~l~-L~-~~E~~~L~~s~~~ 157 (165)
T d1t2da2 126 TPVVLGA-NGVEQVIELQ-LN-SEEKAKFDEAIAE 157 (165)
T ss_dssp EEEEEET-TEEEEECCCC-CC-HHHHHHHHHHHHH
T ss_pred eeEEEcC-CceEEEeCCC-CC-HHHHHHHHHHHHH
Confidence 4566676 4555577776 66 6678888888776
No 18
>d1mlaa1 c.19.1.1 (A:3-127,A:198-307) Catalytic domain of malonyl-CoA ACP transacylase FabD {Escherichia coli [TaxId: 562]}
Probab=24.57 E-value=11 Score=24.98 Aligned_cols=20 Identities=20% Similarity=0.499 Sum_probs=17.7
Q ss_pred CCchHHHHHHHHHhhhhCCC
Q 047875 51 LKHPSFQNLLSQAGEEFGFD 70 (92)
Q Consensus 51 L~hP~F~~LL~~aeeEfG~~ 70 (92)
-++|.|++.++++.+.+|++
T Consensus 22 ~~~p~~r~~~~~~~~~l~~~ 41 (235)
T d1mlaa1 22 ASYPIVEETFAEASAALGYD 41 (235)
T ss_dssp HHCHHHHHHHHHHHHHHTSC
T ss_pred HCCHHHHHHHHHHHHHhCCC
Confidence 46899999999999999875
No 19
>d1dkgd1 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]}
Probab=23.76 E-value=21 Score=22.15 Aligned_cols=40 Identities=13% Similarity=0.120 Sum_probs=30.0
Q ss_pred eccCCCchHHHHHHHHHhhhhCCCCCCCceeeeCCHHHHH
Q 047875 47 PISHLKHPSFQNLLSQAGEEFGFDHPMGVLTIPCSEQVFF 86 (92)
Q Consensus 47 pv~yL~hP~F~~LL~~aeeEfG~~~~~G~L~iPC~~~~F~ 86 (92)
..+-|..-.++.|.+.|++.+|-.-..-.|++|+.....+
T Consensus 109 s~~~l~a~~L~~l~~~a~~~~~~~~~~~VitVPa~f~~~~ 148 (183)
T d1dkgd1 109 APPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQ 148 (183)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHH
Confidence 4455667778889999999999876645789998766544
No 20
>d1dt9a1 c.55.4.2 (A:143-276) Middle domain of eukaryotic peptide chain release factor subunit 1, ERF1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.99 E-value=27 Score=22.02 Aligned_cols=21 Identities=24% Similarity=0.241 Sum_probs=19.7
Q ss_pred EEeccCCCchHHHHHHHHHhh
Q 047875 45 VVPISHLKHPSFQNLLSQAGE 65 (92)
Q Consensus 45 vVpv~yL~hP~F~~LL~~aee 65 (92)
+++++|-...=|++++++|++
T Consensus 111 ~~d~~y~ge~Gl~e~i~~s~d 131 (134)
T d1dt9a1 111 LVDISYGGENGFNQAIELSTE 131 (134)
T ss_dssp EEECSSCTTHHHHHHHHHHSS
T ss_pred EEECCCCCchhHHHHHHHHHh
Confidence 799999999999999999986
No 21
>d2hyja2 a.121.1.1 (A:83-200) Putative transcriptional regulator SCO4940 {Streptomyces coelicolor [TaxId: 1902]}
Probab=22.96 E-value=21 Score=20.51 Aligned_cols=33 Identities=12% Similarity=0.107 Sum_probs=26.6
Q ss_pred chhHHHHHHHHhhhhhccccCCCCceEEEEecc
Q 047875 6 PKIVNAKQALRRAFMASEAATVPKGHFAVYIGE 38 (92)
Q Consensus 6 ~~~~~~k~~l~r~~s~~~~~~vpkG~~aVyVG~ 38 (92)
|++-+++..+..|....+....|.||+.+-.+.
T Consensus 2 ~~~~rL~a~~~~~~~~~~~~~~~~GC~~~~~~~ 34 (118)
T d2hyja2 2 PGLRRLRAVCANSVGYLEEPLLPGGCLLTAALS 34 (118)
T ss_dssp TTHHHHHHHHHHHHHHHHSCSSTTSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCChhHhHHH
Confidence 566788999999888777888899999776653
No 22
>d2al3a1 d.15.1.2 (A:10-85) Tether containing UBX domain for GLUT4 (Tug) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=22.86 E-value=63 Score=18.51 Aligned_cols=35 Identities=14% Similarity=0.200 Sum_probs=26.4
Q ss_pred ceeEEEEeccCCCchHHHHHHHHHhhhhCCCCCCCce
Q 047875 40 EKKRFVVPISHLKHPSFQNLLSQAGEEFGFDHPMGVL 76 (92)
Q Consensus 40 e~~RfvVpv~yL~hP~F~~LL~~aeeEfG~~~~~G~L 76 (92)
..+|..|+++= .-...+.|++|.+.|||+.+.-.|
T Consensus 9 ~~rR~~VKvtP--~t~l~~VL~eaC~k~~~~~~~~~L 43 (76)
T d2al3a1 9 NGRRHTVKVTP--STVLLQVLEDTCRRQDFNPSEYDL 43 (76)
T ss_dssp TSCEEEECCCT--TSBHHHHHHHHHHHTTCCGGGCEE
T ss_pred CCcEEEEEeCC--CcCHHHHHHHHHHHhCCChhHcee
Confidence 57899998853 336788999999999998653333
No 23
>d2pd1a1 d.58.4.11 (A:1-100) Hypothetical protein NE2512 {Nitrosomonas europaea [TaxId: 915]}
Probab=22.72 E-value=31 Score=19.41 Aligned_cols=53 Identities=23% Similarity=0.193 Sum_probs=35.3
Q ss_pred HHHHHHHhhhhhccccCCCCceEEEEeccCceeEEEEec---------cCCCchHHHHHHHHHhh
Q 047875 10 NAKQALRRAFMASEAATVPKGHFAVYIGEFEKKRFVVPI---------SHLKHPSFQNLLSQAGE 65 (92)
Q Consensus 10 ~~k~~l~r~~s~~~~~~vpkG~~aVyVG~~e~~RfvVpv---------~yL~hP~F~~LL~~aee 65 (92)
.+.+.++.... ...-..||+..++..++..+|++=- .|++.|.|+++++...+
T Consensus 19 ~~~~~l~~~~~---~~~~E~Gcl~y~~~~~~p~~~~~~E~w~d~~a~~aH~~s~~~~~~~~~~~~ 80 (100)
T d2pd1a1 19 ALADFLASALP---LANAESGTTAWFALKFGPSTFGVFDAFADEAGRQAHLNGQIAAALMANAAT 80 (100)
T ss_dssp HHHHHHHHTHH---HHHTCTTEEEEEEEECSSSEEEEEEEESSHHHHHHHHTSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH---HhhcCCCeeEEEEecCCCcEEEEEEEeCChHHHHHHHcCHHHHHHHHHhHH
Confidence 34445544332 2234679998888765667787743 46788999999888765
No 24
>d2pbza1 c.30.1.8 (A:4-99) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Thermococcus kodakaraensis [TaxId: 311400]}
Probab=22.67 E-value=0.56 Score=29.35 Aligned_cols=25 Identities=24% Similarity=0.448 Sum_probs=16.8
Q ss_pred ccCCCCceEEEEeccCceeEEEEec
Q 047875 24 AATVPKGHFAVYIGEFEKKRFVVPI 48 (92)
Q Consensus 24 ~~~vpkG~~aVyVG~~e~~RfvVpv 48 (92)
.--+|.|.|++|+|-+.-+.+-||+
T Consensus 59 aI~IPhgSfv~Y~G~~~ie~~~VP~ 83 (96)
T d2pbza1 59 GIVVPHGSFVAYLGIEAIEKAKARF 83 (96)
T ss_dssp SBCCCBTTHHHHSCHHHHHTCCSCC
T ss_pred eEEEcCCCEEEEecHHHHhhCCCCc
Confidence 4469999999999962223454543
No 25
>d1b0aa2 c.58.1.2 (A:2-122) Tetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}
Probab=21.78 E-value=78 Score=18.78 Aligned_cols=53 Identities=23% Similarity=0.307 Sum_probs=37.2
Q ss_pred CCCCceEEEEeccCceeEEEEeccCCCchHHHHHHHHHhhhhCCCCCCCceeee--CCHHHHHHhHhc
Q 047875 26 TVPKGHFAVYIGEFEKKRFVVPISHLKHPSFQNLLSQAGEEFGFDHPMGVLTIP--CSEQVFFDLTCS 91 (92)
Q Consensus 26 ~vpkG~~aVyVG~~e~~RfvVpv~yL~hP~F~~LL~~aeeEfG~~~~~G~L~iP--C~~~~F~~vl~~ 91 (92)
..+.+...|+||+ +. ..-.....-.++.++.|+... .+.+| |+.+.+...+..
T Consensus 30 ~~~P~LavI~vg~-d~----------aS~~Yv~~k~k~a~~lGi~~~--~~~l~~~~t~~~l~~~I~~ 84 (121)
T d1b0aa2 30 LRAPGLAVVLVGS-NP----------ASQIYVASKRKACEEVGFVSR--SYDLPETTSEAELLELIDT 84 (121)
T ss_dssp CCCCEEEEEEESC-CH----------HHHHHHHHHHHHHHHHTCEEC--CEEECTTCCHHHHHHHHHH
T ss_pred CCCceEEEEEeCC-Ch----------hHHHHHHHHHHHHHhhcccee--eeeccccccHHHHHHHHHH
Confidence 3456899999997 21 112355677888999999875 57776 777788777654
No 26
>d3kvta_ d.42.1.2 (A:) akv3.1 voltage-gated potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]}
Probab=21.52 E-value=5.1 Score=23.95 Aligned_cols=55 Identities=16% Similarity=0.230 Sum_probs=37.3
Q ss_pred eEEEEeccCceeEEEEeccCCCc-h--HHHHHHHHHhhhhCCCCCCCceeeeCCHHHHHHhHhc
Q 047875 31 HFAVYIGEFEKKRFVVPISHLKH-P--SFQNLLSQAGEEFGFDHPMGVLTIPCSEQVFFDLTCS 91 (92)
Q Consensus 31 ~~aVyVG~~e~~RfvVpv~yL~h-P--~F~~LL~~aeeEfG~~~~~G~L~iPC~~~~F~~vl~~ 91 (92)
.+.+=||. ++|.+..+-|.. | .|..+ ++....++.+.|.+-|--+...|++||.-
T Consensus 3 rI~LNVGG---~~F~t~~~tL~~~~~s~l~~~---~~~~~~~~~~~~~~fiDRdp~~F~~IL~y 60 (103)
T d3kvta_ 3 RVIINVGG---IRHETYKATLKKIPATRLSRL---TEGMLNYDPVLNEYFFDRHPGVFAQIINY 60 (103)
T ss_dssp EEEEEETT---EEEEEEHHHHTTSCSSTTTTC---CTTSTTEETTTTEEEECSCTTTHHHHHHH
T ss_pred EEEEEECC---EEEEEeHHHHhhCccchhHHH---HcCCCccCCCCCcEEecCCHHHHHHHHHH
Confidence 35566884 899998887763 4 22222 23334445555899999999999999863
No 27
>d1pvva1 c.78.1.1 (A:1-150) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=21.41 E-value=24 Score=22.13 Aligned_cols=18 Identities=33% Similarity=0.438 Sum_probs=12.4
Q ss_pred CCCchHHHHHHHHH--hhhhC
Q 047875 50 HLKHPSFQNLLSQA--GEEFG 68 (92)
Q Consensus 50 yL~hP~F~~LL~~a--eeEfG 68 (92)
--+||. |+|++.. .|+||
T Consensus 131 ~~~HPt-QaL~D~~Ti~e~~G 150 (150)
T d1pvva1 131 DFSHPC-QALADYMTIWEKKG 150 (150)
T ss_dssp SSCCHH-HHHHHHHHHHHHHS
T ss_pred CCCCcH-HHHHHHHHHHHHcC
Confidence 446887 7888875 56665
No 28
>d3buxb3 d.93.1.1 (B:264-351) Cbl {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.04 E-value=36 Score=20.27 Aligned_cols=40 Identities=23% Similarity=0.407 Sum_probs=27.0
Q ss_pred cCCCCceEE-EEeccCceeEEEEeccCCCchHHHHHHHHHhhhh
Q 047875 25 ATVPKGHFA-VYIGEFEKKRFVVPISHLKHPSFQNLLSQAGEEF 67 (92)
Q Consensus 25 ~~vpkG~~a-VyVG~~e~~RfvVpv~yL~hP~F~~LL~~aeeEf 67 (92)
+-..-|.-| =||-. +.+ ++-+-=.|.|++|+|++-++|-|
T Consensus 33 SCTrlGQWAIGyvt~-dg~--IlQTIp~nk~L~qaLidG~reGf 73 (88)
T d3buxb3 33 SCTRLGQWAIGYVTA-DGN--ILQTIPHNKPLFQALIDGFREGF 73 (88)
T ss_dssp CSSSTTSEEEEEECT-TSC--EEEECCSSCCHHHHHHHHHHHTS
T ss_pred ccccccceeeeeecc-CCc--eeeeccCccHHHHHHHhccccee
Confidence 333444444 47765 322 55666789999999999998865
Done!