BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047889
(72 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O04486|RAA2A_ARATH Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2
SV=1
Length = 217
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 53/57 (92%), Positives = 55/57 (96%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHL 57
AITSAYYRGALGALLVYDVTK TTFENVSRWLK+LRDHA SNIVIMLIGNK+DLKHL
Sbjct: 76 AITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHL 132
>sp|Q39572|YPTC6_CHLRE Ras-related protein YPTC6 OS=Chlamydomonas reinhardtii GN=YPTC6
PE=3 SV=1
Length = 216
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/63 (80%), Positives = 56/63 (88%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHLLNS 60
AITSAYYRGA+GALLVYD+TKS TFENV RWLK+LRDHA SNIVIML+GNKSDLKHL +
Sbjct: 76 AITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVIMLVGNKSDLKHLRDV 135
Query: 61 MCE 63
E
Sbjct: 136 QTE 138
>sp|P40393|RIC2_ORYSJ Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2
PE=2 SV=2
Length = 217
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/64 (71%), Positives = 55/64 (85%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHLLNS 60
AITSAYYRGA+GALLVYDVT+ +TFENV RWLK+LRDH NIV+ML+GNKSDL+HL+
Sbjct: 78 AITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDLRHLVAV 137
Query: 61 MCEE 64
+E
Sbjct: 138 QTDE 141
>sp|Q40195|RB11E_LOTJA Ras-related protein Rab11E OS=Lotus japonicus GN=RAB11E PE=2 SV=1
Length = 218
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/64 (73%), Positives = 54/64 (84%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHLLNS 60
AITSAYYRGA+GALLVYDVT+STTFE RWLK+LRDH NIV+MLIGNKSDL+HL+
Sbjct: 77 AITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGNKSDLRHLVTV 136
Query: 61 MCEE 64
E+
Sbjct: 137 STED 140
>sp|Q39434|RB2BV_BETVU Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1
Length = 214
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 46/57 (80%), Positives = 52/57 (91%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHL 57
AITSAYYRGA+GALLVYD+TK TF+NV RWL++LRDHA SNIVIM+ GNKSDLKHL
Sbjct: 76 AITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLKHL 132
>sp|Q9SN35|RAA1D_ARATH Ras-related protein RABA1d OS=Arabidopsis thaliana GN=RABA1D PE=2
SV=1
Length = 214
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 55/64 (85%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHLLNS 60
AITSAYYRGA+GALLVYDVT+ +TFENV RWL++LRDH NIV+ML+GNKSDL+HL+
Sbjct: 77 AITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDLRHLVAV 136
Query: 61 MCEE 64
E+
Sbjct: 137 QTED 140
>sp|Q40194|RB11D_LOTJA Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1
Length = 218
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 46/64 (71%), Positives = 54/64 (84%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHLLNS 60
AITSAYYRGA+GALLVYDVT+ TFEN +RWLK+LRDH NIV+MLIGNKSDL+HL+
Sbjct: 77 AITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAV 136
Query: 61 MCEE 64
E+
Sbjct: 137 PTED 140
>sp|P62494|RB11A_RAT Ras-related protein Rab-11A OS=Rattus norvegicus GN=Rab11a PE=1
SV=3
Length = 216
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 46/57 (80%), Positives = 52/57 (91%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHL 57
AITSAYYRGA+GALLVYD+ K T+ENV RWLK+LRDHA SNIVIML+GNKSDL+HL
Sbjct: 75 AITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
>sp|P62493|RB11A_RABIT Ras-related protein Rab-11A OS=Oryctolagus cuniculus GN=RAB11A PE=2
SV=3
Length = 216
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 46/57 (80%), Positives = 52/57 (91%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHL 57
AITSAYYRGA+GALLVYD+ K T+ENV RWLK+LRDHA SNIVIML+GNKSDL+HL
Sbjct: 75 AITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
>sp|Q5R9M7|RB11A_PONAB Ras-related protein Rab-11A OS=Pongo abelii GN=RAB11A PE=2 SV=3
Length = 216
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 46/57 (80%), Positives = 52/57 (91%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHL 57
AITSAYYRGA+GALLVYD+ K T+ENV RWLK+LRDHA SNIVIML+GNKSDL+HL
Sbjct: 75 AITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
>sp|Q52NJ1|RB11A_PIG Ras-related protein Rab-11A OS=Sus scrofa GN=RAB11A PE=2 SV=3
Length = 216
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 46/57 (80%), Positives = 52/57 (91%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHL 57
AITSAYYRGA+GALLVYD+ K T+ENV RWLK+LRDHA SNIVIML+GNKSDL+HL
Sbjct: 75 AITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
>sp|P62492|RB11A_MOUSE Ras-related protein Rab-11A OS=Mus musculus GN=Rab11a PE=1 SV=3
Length = 216
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 46/57 (80%), Positives = 52/57 (91%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHL 57
AITSAYYRGA+GALLVYD+ K T+ENV RWLK+LRDHA SNIVIML+GNKSDL+HL
Sbjct: 75 AITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
>sp|P62491|RB11A_HUMAN Ras-related protein Rab-11A OS=Homo sapiens GN=RAB11A PE=1 SV=3
Length = 216
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 46/57 (80%), Positives = 52/57 (91%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHL 57
AITSAYYRGA+GALLVYD+ K T+ENV RWLK+LRDHA SNIVIML+GNKSDL+HL
Sbjct: 75 AITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
>sp|P62490|RB11A_CANFA Ras-related protein Rab-11A OS=Canis familiaris GN=RAB11A PE=2 SV=3
Length = 216
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 46/57 (80%), Positives = 52/57 (91%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHL 57
AITSAYYRGA+GALLVYD+ K T+ENV RWLK+LRDHA SNIVIML+GNKSDL+HL
Sbjct: 75 AITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
>sp|Q5ZJN2|RB11A_CHICK Ras-related protein Rab-11A OS=Gallus gallus GN=RAB11A PE=2 SV=1
Length = 216
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 46/57 (80%), Positives = 52/57 (91%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHL 57
AITSAYYRGA+GALLVYD+ K T+ENV RWLK+LRDHA SNIVIML+GNKSDL+HL
Sbjct: 75 AITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
>sp|Q2TA29|RB11A_BOVIN Ras-related protein Rab-11A OS=Bos taurus GN=RAB11A PE=2 SV=3
Length = 216
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 46/57 (80%), Positives = 52/57 (91%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHL 57
AITSAYYRGA+GALLVYD+ K T+ENV RWLK+LRDHA SNIVIML+GNKSDL+HL
Sbjct: 75 AITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
>sp|O35509|RB11B_RAT Ras-related protein Rab-11B OS=Rattus norvegicus GN=Rab11b PE=2
SV=4
Length = 218
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 46/57 (80%), Positives = 52/57 (91%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHL 57
AITSAYYRGA+GALLVYD+ K T+ENV RWLK+LRDHA SNIVIML+GNKSDL+HL
Sbjct: 75 AITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
>sp|Q15907|RB11B_HUMAN Ras-related protein Rab-11B OS=Homo sapiens GN=RAB11B PE=1 SV=4
Length = 218
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 46/57 (80%), Positives = 52/57 (91%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHL 57
AITSAYYRGA+GALLVYD+ K T+ENV RWLK+LRDHA SNIVIML+GNKSDL+HL
Sbjct: 75 AITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
>sp|Q3MHP2|RB11B_BOVIN Ras-related protein Rab-11B OS=Bos taurus GN=RAB11B PE=2 SV=3
Length = 218
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 46/57 (80%), Positives = 52/57 (91%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHL 57
AITSAYYRGA+GALLVYD+ K T+ENV RWLK+LRDHA SNIVIML+GNKSDL+HL
Sbjct: 75 AITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
>sp|P46638|RB11B_MOUSE Ras-related protein Rab-11B OS=Mus musculus GN=Rab11b PE=1 SV=3
Length = 218
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 46/57 (80%), Positives = 52/57 (91%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHL 57
AITSAYYRGA+GALLVYD+ K T+ENV RWLK+LRDHA SNIVIML+GNKSDL+HL
Sbjct: 75 AITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
>sp|Q01111|YPT3_NICPL Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2
SV=1
Length = 218
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 46/64 (71%), Positives = 55/64 (85%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHLLNS 60
AITSAYYRGA+GALLVYDVT+ T+ENV+RWLK+LRDH NIV+MLIGNKSDL+HL+
Sbjct: 77 AITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIVVMLIGNKSDLRHLVAV 136
Query: 61 MCEE 64
+E
Sbjct: 137 STDE 140
>sp|Q9LK99|RAA1G_ARATH Ras-related protein RABA1g OS=Arabidopsis thaliana GN=RABA1G PE=2
SV=1
Length = 217
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 45/57 (78%), Positives = 52/57 (91%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHL 57
AITSAYYRGA+GALLVYDVT+ TFENV RWLK+LRDH +NIVIML+GNK+DL+HL
Sbjct: 77 AITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIVIMLVGNKADLRHL 133
>sp|O49513|RAA1E_ARATH Ras-related protein RABA1e OS=Arabidopsis thaliana GN=RABA1E PE=2
SV=1
Length = 217
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 54/64 (84%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHLLNS 60
AITSAYYRGA+GALLVYD+T+ TFENV RWLK+LRDH +N+VIML+GNK+DL+HL
Sbjct: 77 AITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVVIMLVGNKADLRHLRAV 136
Query: 61 MCEE 64
EE
Sbjct: 137 PTEE 140
>sp|P22129|RB11B_DIPOM Ras-related protein Rab-11B OS=Diplobatis ommata PE=2 SV=1
Length = 218
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 45/57 (78%), Positives = 52/57 (91%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHL 57
AITSAYYRGA+GALLVYD+ K T+ENV RWLK+LRDHA +NIVIML+GNKSDL+HL
Sbjct: 75 AITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHL 131
>sp|Q9LNW1|RAA2B_ARATH Ras-related protein RABA2b OS=Arabidopsis thaliana GN=RABA2B PE=2
SV=2
Length = 214
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/57 (80%), Positives = 51/57 (89%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHL 57
AITSAYYRGA+GALLVYD+TK TFENV RWL++LRDHA SNIVIM+ GNKSDL HL
Sbjct: 76 AITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVIMMAGNKSDLNHL 132
>sp|Q39222|RAA1B_ARATH Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2
SV=1
Length = 216
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 54/64 (84%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHLLNS 60
AITSAYYRGA+GALLVYDVT+ TFENV RWLK+L++H NIV+ML+GNKSDL+HLL
Sbjct: 77 AITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLLAV 136
Query: 61 MCEE 64
E+
Sbjct: 137 PTED 140
>sp|Q9FJH0|RAA1F_ARATH Ras-related protein RABA1f OS=Arabidopsis thaliana GN=RABA1F PE=2
SV=1
Length = 217
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 44/57 (77%), Positives = 51/57 (89%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHL 57
AITSAYYRGA+GALLVYDVT+ TFENV RWLK+LRDH +NIVIM +GNK+DL+HL
Sbjct: 77 AITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGNKADLRHL 133
>sp|Q40193|RB11C_LOTJA Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1
Length = 216
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 45/57 (78%), Positives = 51/57 (89%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHL 57
AITSAYYRGA+GALLVYD+TK TF+NV RWL++LRDHA SNIVIM+ GNKSDL HL
Sbjct: 76 AITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLNHL 132
>sp|Q96283|RAA2C_ARATH Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2
SV=4
Length = 217
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/64 (75%), Positives = 55/64 (85%), Gaps = 1/64 (1%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHLLNS 60
AITSAYYRGA+GALLVYD+TK TF+NV RWL++LRDHA SNIVIM+ GNKSDL H L S
Sbjct: 76 AITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNH-LRS 134
Query: 61 MCEE 64
+ EE
Sbjct: 135 VAEE 138
>sp|Q9S810|RAA1I_ARATH Ras-related protein RABA1i OS=Arabidopsis thaliana GN=RABA1I PE=2
SV=1
Length = 218
Score = 100 bits (248), Expect = 4e-21, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 54/64 (84%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHLLNS 60
AITSAYYRGA+GALLVYDVT+ TFENV RWLK+LRDH +NIVIML+GNK+DL+HL
Sbjct: 77 AITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRHLRAI 136
Query: 61 MCEE 64
EE
Sbjct: 137 STEE 140
>sp|P17610|YPT3_SCHPO GTP-binding protein ypt3 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ypt3 PE=1 SV=1
Length = 214
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 55/64 (85%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHLLNS 60
AITSAYYRGA+GAL+VYD+TK ++F+NV RWLK+LR+HA SNIVIML+GNK+DL HL
Sbjct: 74 AITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAV 133
Query: 61 MCEE 64
EE
Sbjct: 134 STEE 137
>sp|Q40521|RB11B_TOBAC Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1
Length = 217
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 43/57 (75%), Positives = 51/57 (89%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHL 57
AITSAYYRGA+GAL+VYD+T+ TFENV RWLK+LRDH NIVIML+GNK+DL+HL
Sbjct: 78 AITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLVGNKADLRHL 134
>sp|Q1PEX3|RAA1H_ARATH Ras-related protein RABA1h OS=Arabidopsis thaliana GN=RABA1H PE=2
SV=1
Length = 218
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 46/64 (71%), Positives = 52/64 (81%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHLLNS 60
AITSAYYRGA+GALLVYDVT+ TFENV RWLK+LRDH +N VIML+GNK+DL HL
Sbjct: 77 AITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTVIMLVGNKADLNHLRAI 136
Query: 61 MCEE 64
EE
Sbjct: 137 STEE 140
>sp|Q9FK68|RAA1C_ARATH Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=1
SV=1
Length = 216
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 54/64 (84%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHLLNS 60
AITSAYYRGA+GALLVYDVT+ +TFENV WLK+LR+H NIV+ML+GNKSDL+HL+
Sbjct: 77 AITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSDLRHLVAV 136
Query: 61 MCEE 64
E+
Sbjct: 137 QTED 140
>sp|Q9FIF9|RAA2D_ARATH Ras-related protein RABA2d OS=Arabidopsis thaliana GN=RABA2D PE=2
SV=1
Length = 217
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 47/64 (73%), Positives = 55/64 (85%), Gaps = 1/64 (1%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHLLNS 60
AITSAYYRGA+GALLVYD+TK TF+NV RWL++LRDHA SNIVIM+ GNK+DL H L S
Sbjct: 76 AITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKADLNH-LRS 134
Query: 61 MCEE 64
+ EE
Sbjct: 135 VAEE 138
>sp|P28185|RAA1A_ARATH Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=1
SV=1
Length = 216
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 52/64 (81%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHLLNS 60
AITSAYYRGA+GALL+YDVT+ TFEN +RWL++LR H NIV+MLIGNK DL+HL+
Sbjct: 77 AITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCDLRHLVAV 136
Query: 61 MCEE 64
EE
Sbjct: 137 KTEE 140
>sp|Q40523|RB11A_TOBAC Ras-related protein Rab11A OS=Nicotiana tabacum GN=RAB11A PE=2 SV=1
Length = 216
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 44/57 (77%), Positives = 50/57 (87%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHL 57
AITSAYYRGA+GALL YD+TK TF+NV RWL++LRDH SNIVI+L GNKSDLKHL
Sbjct: 76 AITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVIILAGNKSDLKHL 132
>sp|Q40723|RLGP2_ORYSJ Ras-related protein RGP2 OS=Oryza sativa subsp. japonica GN=RGP2
PE=2 SV=2
Length = 217
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 43/57 (75%), Positives = 52/57 (91%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHL 57
AITSAYYRGA+GALLVYD+TK +F+NV RWL++LRDHA S+IVIM++GNKSDL HL
Sbjct: 76 AITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMVGNKSDLIHL 132
>sp|Q40522|RB11D_TOBAC Ras-related protein Rab11D OS=Nicotiana tabacum GN=RAB11D PE=2 SV=1
Length = 222
Score = 88.2 bits (217), Expect = 1e-17, Method: Composition-based stats.
Identities = 38/55 (69%), Positives = 49/55 (89%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLK 55
A+TSAYYRGA+GA+LVYD+TK TF+++ RWL++LR HA NIVIMLIGNK+DL+
Sbjct: 79 AVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIGNKTDLE 133
>sp|P25766|RLGP1_ORYSJ Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1
PE=2 SV=2
Length = 226
Score = 87.8 bits (216), Expect = 2e-17, Method: Composition-based stats.
Identities = 40/57 (70%), Positives = 50/57 (87%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHL 57
A+TSAYYRGA+GA+LVYD+TK +F++V+RWL++LR HA NIVIMLIGNKSDL L
Sbjct: 82 AVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTL 138
>sp|P36412|RB11A_DICDI Ras-related protein Rab-11A OS=Dictyostelium discoideum GN=rab11A
PE=1 SV=1
Length = 214
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 51/64 (79%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHLLNS 60
AITSAYYRGA+GALLVYD+ K T+++V RW+ +LR++A NI IML+GNKSDL+HL
Sbjct: 77 AITSAYYRGAVGALLVYDIAKQATYKSVERWILELRENADRNIEIMLVGNKSDLRHLREV 136
Query: 61 MCEE 64
+E
Sbjct: 137 STDE 140
>sp|Q9SMQ6|RAA4B_ARATH Ras-related protein RABA4b OS=Arabidopsis thaliana GN=RABA4B PE=2
SV=1
Length = 224
Score = 86.3 bits (212), Expect = 5e-17, Method: Composition-based stats.
Identities = 39/55 (70%), Positives = 49/55 (89%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLK 55
A+TSAYYRGA+GA+LVYD+TK TFE++ RWL++LR HA NIVI+LIGNKSDL+
Sbjct: 81 AVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKSDLE 135
>sp|Q9FJN8|RAA4A_ARATH Ras-related protein RABA4a OS=Arabidopsis thaliana GN=RABA4A PE=2
SV=1
Length = 226
Score = 86.3 bits (212), Expect = 5e-17, Method: Composition-based stats.
Identities = 37/54 (68%), Positives = 48/54 (88%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDL 54
A+TSAYYRGA+GA+LVYD+T+ TF+++ RWL++LR HA NIVI+LIGNKSDL
Sbjct: 81 AVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVIILIGNKSDL 134
>sp|Q9FE79|RAA4C_ARATH Ras-related protein RABA4c OS=Arabidopsis thaliana GN=RABA4C PE=2
SV=1
Length = 223
Score = 86.3 bits (212), Expect = 5e-17, Method: Composition-based stats.
Identities = 39/57 (68%), Positives = 50/57 (87%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHL 57
A+TSAYYRGA+GA+LVYD+TK +F++V+RWL++LR HA NIVIMLIGNK+DL L
Sbjct: 79 AVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKTDLGTL 135
>sp|Q40520|RB11C_TOBAC Ras-related protein Rab11C OS=Nicotiana tabacum GN=RAB11C PE=2 SV=1
Length = 222
Score = 86.3 bits (212), Expect = 6e-17, Method: Composition-based stats.
Identities = 37/55 (67%), Positives = 48/55 (87%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLK 55
A+TSAYYRGA+GA+LVYD+TK TF+++ RWL++LR HA NIVIML GNK+DL+
Sbjct: 79 AVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLTGNKTDLE 133
>sp|Q40191|RB11A_LOTJA Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1
Length = 226
Score = 85.9 bits (211), Expect = 7e-17, Method: Composition-based stats.
Identities = 37/54 (68%), Positives = 48/54 (88%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDL 54
A+TSAYYRGA+GA+LVYD+TK TF+++ RWL++LR+HA NIVI+LIGNK DL
Sbjct: 81 AVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGNKCDL 134
>sp|P38555|YPT31_YEAST GTP-binding protein YPT31/YPT8 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YPT31 PE=1 SV=3
Length = 223
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 51/64 (79%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHLLNS 60
AITSAYYRGA+GAL+VYD++KS+++EN + WL +LR++A N+ + LIGNKSDL HL
Sbjct: 77 AITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKSDLAHLRAV 136
Query: 61 MCEE 64
EE
Sbjct: 137 PTEE 140
>sp|P57735|RAB25_HUMAN Ras-related protein Rab-25 OS=Homo sapiens GN=RAB25 PE=1 SV=2
Length = 213
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 48/64 (75%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHLLNS 60
AITSAYYRGA+GALLV+D+TK T+ V RWLK+L DHA + IV+ML+GNKSDL
Sbjct: 76 AITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREV 135
Query: 61 MCEE 64
EE
Sbjct: 136 PTEE 139
>sp|P46629|RAB25_RABIT Ras-related protein Rab-25 OS=Oryctolagus cuniculus GN=RAB25 PE=2
SV=1
Length = 213
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 48/64 (75%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHLLNS 60
AITSAYYRGA+GALLV+D+TK T+ V RWLK+L DHA + IV+ML+GNKSDL
Sbjct: 76 AITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREV 135
Query: 61 MCEE 64
EE
Sbjct: 136 PTEE 139
>sp|E2RQ15|RAB25_CANFA Ras-related protein Rab-25 OS=Canis familiaris GN=RAB25 PE=3 SV=1
Length = 213
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 48/64 (75%)
Query: 1 AITSAYYRGALGALLVYDVTKSTTFENVSRWLKDLRDHAGSNIVIMLIGNKSDLKHLLNS 60
AITSAYYRGA+GALLV+D+TK T+ V RWLK+L DHA + IV+ML+GNKSDL
Sbjct: 76 AITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLHQAREV 135
Query: 61 MCEE 64
EE
Sbjct: 136 PTEE 139
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,928,413
Number of Sequences: 539616
Number of extensions: 728304
Number of successful extensions: 2956
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 522
Number of HSP's successfully gapped in prelim test: 212
Number of HSP's that attempted gapping in prelim test: 2323
Number of HSP's gapped (non-prelim): 736
length of query: 72
length of database: 191,569,459
effective HSP length: 44
effective length of query: 28
effective length of database: 167,826,355
effective search space: 4699137940
effective search space used: 4699137940
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)