BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047896
(475 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3VTA|A Chain A, Crystal Structure Of Cucumisin, A Subtilisin-Like
Endoprotease From Cucumis Melo L
pdb|3VTA|B Chain B, Crystal Structure Of Cucumisin, A Subtilisin-Like
Endoprotease From Cucumis Melo L
Length = 621
Score = 279 bits (713), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 186/487 (38%), Positives = 260/487 (53%), Gaps = 38/487 (7%)
Query: 1 GVDVISISYGSP-PLPFYDDPIASAAFTAVRNGIFVSCAAGNKGPDPSSSTNGAPWILTV 59
GVD+IS+S G P ++ D IA +F AV GI S +AGN GP+ ++ + +PW+L+V
Sbjct: 156 GVDIISLSVGGANPRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSV 215
Query: 60 GASTTDRSIVASAQLGNHATYDVEILFMLVNFTSMQLPLVYPGGRN--------SSAAFC 111
AST DR V Q+GN ++ + F + PLV GR+ S++ FC
Sbjct: 216 AASTMDRKFVTQVQIGNGQSFQG---VSINTFDNQYYPLV--SGRDIPNTGFDKSTSRFC 270
Query: 112 LPGSLNNIDVKGKVVVCERDGNMRRNETEYYVKEAGGAAMILISDKFDAYSAILETHVLP 171
S+N +KGK+VVCE + K GAA +L++ Y+ +++ LP
Sbjct: 271 TDKSVNPNLLKGKIVVCEASFGPHE-----FFKSLDGAAGVLMTSNTRDYA---DSYPLP 322
Query: 172 AVQVGYATGESIKAYINSTSSPTVAILLRTG-NKKSAPEVASLSARGPNKVSPGILKPDI 230
+ + + YI S SP I T SAP V S S+RGPN+ + ++KPDI
Sbjct: 323 SSVLDPNDLLATLRYIYSIRSPGATIFKSTTILNASAPVVVSFSSRGPNRATKDVIKPDI 382
Query: 231 IGPGVSILAAWPS-SQENITKTKATFEIADGTSMSCPHLSGIAALLKSTHPDWSPAAIKS 289
GPGV ILAAWPS + + F I GTSMSCPH++GIA +K+ +P WSPAAIKS
Sbjct: 383 SGPGVEILAAWPSVAPVGGIRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKS 442
Query: 290 AIMTTADIVNLEGKPIINNYNLLPAELFAVGAGHVNPSKANDPGLIYDIQPDDYVPYLCG 349
A+MTTA P+ +N P FA G+GHVNP KA PGL+YD DYV +LCG
Sbjct: 443 ALMTTA-------SPMNARFN--PQAEFAYGSGHVNPLKAVRPGLVYDANESDYVKFLCG 493
Query: 350 LNYTDQQLQTIVDHDVQCSKVASIAEAELNYPSFSIKLGSSP---QTYNRTIANVGEANS 406
Y Q ++ I C+ + +LNYPSF + + S Q +NRT+ +V S
Sbjct: 494 QGYNTQAVRRITGDYSACTSGNTGRVWDLNYPSFGLSVSPSQTFNQYFNRTLTSVAPQAS 553
Query: 407 SYTHQIVAPEGVEISVQPNEISFTERNQKVTYSITFTRSQKTSASYAQGYLSWVSTQHTV 466
+Y I AP+G+ ISV PN +SF + ++++T S K A L W H V
Sbjct: 554 TYRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLTVRGSIKGFVVSAS--LVWSDGVHYV 611
Query: 467 RSPIAVS 473
RSPI ++
Sbjct: 612 RSPITIT 618
>pdb|3I6S|A Chain A, Crystal Structure Of The Plant Subtilisin-Like Protease
Sbt3
pdb|3I6S|B Chain B, Crystal Structure Of The Plant Subtilisin-Like Protease
Sbt3
pdb|3I74|A Chain A, Crystal Structure Of The Plant Subtilisin-Like Protease
Sbt3 In Complex With A Chloromethylketone Inhibitor
pdb|3I74|B Chain B, Crystal Structure Of The Plant Subtilisin-Like Protease
Sbt3 In Complex With A Chloromethylketone Inhibitor
Length = 649
Score = 270 bits (689), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 186/490 (37%), Positives = 272/490 (55%), Gaps = 28/490 (5%)
Query: 1 GVDVISISYGSPPLPFYDDPIASAAFTAVRNGIFVSCAAGNKGPDPSSSTNGAPWILTVG 60
GVD+ISISYG +P Y+D I+ A+F A+ G+ VS +AGN+GP S NG+PWIL V
Sbjct: 165 GVDMISISYGYRFIPLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVA 224
Query: 61 ASTTDRSIVASAQLGNHATYDVEILFMLVNFTSMQLPLVYPGGRNSSAAFCLPGSLNNID 120
+ TDR+ + LGN LF F P++Y + ++ L + N +
Sbjct: 225 SGHTDRTFAGTLTLGNGLKIRGWSLFPARAFVR-DSPVIYNKTLSDCSSEELLSQVENPE 283
Query: 121 VKGKVVVCERDGNMRRNETEYYVKEAGGAAMILISDKFDAYSAILETHVLPAVQVGYATG 180
+V+C+ +G+ ++ + A A I IS+ + + T P V V G
Sbjct: 284 --NTIVICDDNGDF--SDQMRIITRARLKAAIFISEDPGVFRS--ATFPNPGVVVNKKEG 337
Query: 181 ESIKAYINSTSSPTVAILLRTG--NKKSAPEVASLSARGPNKVSPGILKPDIIGPGVSIL 238
+ + Y+ ++ +PT I + + K AP VA+ SARGP++ GI KPDI+ PGV IL
Sbjct: 338 KQVINYVKNSVTPTATITFQETYLDTKPAPVVAASSARGPSRSYLGISKPDILAPGVLIL 397
Query: 239 AAWP------SSQENITKTKATFEIADGTSMSCPHLSGIAALLKSTHPDWSPAAIKSAIM 292
AA+P S NI + + + GTSM+ PH +GIAA+LK+ HP+WSP+AI+SA+M
Sbjct: 398 AAYPPNVFATSIGTNILLS-TDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAMM 456
Query: 293 TTADIVNLEGKPIINNYNLLPAELFAVGAGHVNPSKANDPGLIYDIQPDDYVPYLCGLNY 352
TTAD ++ KPI ++ N A +GAGHV+P++A DPGL+YD P DYV LC LN+
Sbjct: 457 TTADPLDNTRKPIKDSDNNKAATPLDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNF 516
Query: 353 TDQQLQTIVDHDVQCSKVASIAEAELNYPSFSIKLGS-------SPQTYNRTIANVGEAN 405
T++Q +TI S S A+LNYPSF I L S Q + RT+ NVG+
Sbjct: 517 TEEQFKTIARS--SASHNCSNPSADLNYPSF-IALYSIEGNFTLLEQKFKRTVTNVGKGA 573
Query: 406 SSYTHQIVAPEGVEISVQPNEISFTERNQKVTYSITFTRSQKTSASYAQGYLSWVST--Q 463
++Y ++ AP+ ISV P + F +N+K +Y++T S G ++WV
Sbjct: 574 ATYKAKLKAPKNSTISVSPQILVFKNKNEKQSYTLTIRYIGDEGQSRNVGSITWVEQNGN 633
Query: 464 HTVRSPIAVS 473
H+VRSPI S
Sbjct: 634 HSVRSPIVTS 643
>pdb|3AFG|A Chain A, Crystal Structure Of Pron-Tk-Sp From Thermococcus
Kodakaraensis
pdb|3AFG|B Chain B, Crystal Structure Of Pron-Tk-Sp From Thermococcus
Kodakaraensis
Length = 539
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 64/122 (52%), Gaps = 17/122 (13%)
Query: 210 VASLSARGPNKVSPGILKPDIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLS 269
+ S+RGP + LKP+++ PG I+AA S + A GT+M+ PH++
Sbjct: 309 ITDFSSRGP--TADNRLKPEVVAPGNWIIAARASGTSMGQPINDYYTAAPGTAMATPHVA 366
Query: 270 GIAALLKSTHPDWSPAAIKSAIMTTADIVNLEGKPIINNYNLLPAEL--FAVGAGHVNPS 327
GIAALL HP W+P +K+A++ TADIV P E+ A GAG VN
Sbjct: 367 GIAALLLQAHPSWTPDKVKTALIETADIVK-------------PDEIADIAYGAGRVNAY 413
Query: 328 KA 329
KA
Sbjct: 414 KA 415
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 1 GVDVISISYGSPPLPFYDDPIASAAFTAVRNGIFVSCAAGNKGPDPSS--STNGAPWILT 58
G+ VI++S GS D ++ A A G+ V AAGN GP+ + S A ++T
Sbjct: 240 GIKVINLSLGSSQSSDGTDSLSQAVNNAWDAGLVVVVAAGNSGPNKYTVGSPAAASKVIT 299
Query: 59 VGA 61
VGA
Sbjct: 300 VGA 302
>pdb|1WSD|A Chain A, Alkaline M-Protease Form I Crystal Strcuture
pdb|1MPT|A Chain A, Crystal Structure Of A New Alkaline Serine Protease
(M-Protease) From Bacillus Sp. Ksm-K16
Length = 269
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 12/82 (14%)
Query: 229 DIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALLKSTHPDWSPAAIK 288
DI+ PGV++ + +P S T+ +GTSM+ PH++G+AAL+K +P WS I+
Sbjct: 191 DIVAPGVNVQSTYPGS---------TYASLNGTSMATPHVAGVAALVKQKNPSWSNVQIR 241
Query: 289 SAIMTTADIV---NLEGKPIIN 307
+ + TA + NL G ++N
Sbjct: 242 NHLKNTATGLGNTNLYGSGLVN 263
>pdb|1V6C|A Chain A, Crystal Structure Of Psychrophilic Subtilisin-like
Protease Apa1 From Antarctic Psychrotroph
Pseudoalteromonas Sp. As-11
pdb|1V6C|B Chain B, Crystal Structure Of Psychrophilic Subtilisin-like
Protease Apa1 From Antarctic Psychrotroph
Pseudoalteromonas Sp. As-11
pdb|1WVM|A Chain A, Crystal Structure Of Psychrophilic Subtilisin-Like Serine
Protease Apa1 From Antarctic Psychrotroph
Pseudoaleromonas Sp. As-11, Complexed With Inhibitor
Chymostatin
pdb|1WVM|B Chain B, Crystal Structure Of Psychrophilic Subtilisin-Like Serine
Protease Apa1 From Antarctic Psychrotroph
Pseudoaleromonas Sp. As-11, Complexed With Inhibitor
Chymostatin
pdb|1Y9Z|A Chain A, Crystal Structure Of Psychrophilic Subtilisin-like Serine
Protease From Antarctic Psychrotroph Pseudoalteromonas
Sp. As-11 At 0.14 Nm Resolution
pdb|1Y9Z|B Chain B, Crystal Structure Of Psychrophilic Subtilisin-like Serine
Protease From Antarctic Psychrotroph Pseudoalteromonas
Sp. As-11 At 0.14 Nm Resolution
Length = 441
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 82/169 (48%), Gaps = 32/169 (18%)
Query: 178 ATGESIKAYINSTS------SPTVAILLRTGNKKSA-PEVASL------SARG----PNK 220
ATG + +N TS + + ++ R GN+ S+ PE+ S A+G N
Sbjct: 253 ATGALAECTVNGTSFSCGNMANKICLVERVGNQGSSYPEINSTKACKTAGAKGIIVYSNS 312
Query: 221 VSPGILKP-------DIIGPGVSI-----LAAWPSSQENIT---KTKATFEIADGTSMSC 265
PG+ P DI P VS+ LA ++ T + +E +GTSM+
Sbjct: 313 ALPGLQNPFLVDANSDITVPSVSVDRATGLALKAKLGQSTTVSNQGNQDYEYYNGTSMAT 372
Query: 266 PHLSGIAALLKSTHPDWSPAAIKSAIMTTADIVNLEGKPIINNYNLLPA 314
PH+SG+A L+ S HP+ S + +++A+ TAD +++ G+ Y ++ A
Sbjct: 373 PHVSGVATLVWSYHPECSASQVRAALNATADDLSVAGRDNQTGYGMINA 421
>pdb|1C9J|A Chain A, Bacillus Lentus Subtilisin K27rN87SV104YN123ST274A Variant
Length = 269
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 12/82 (14%)
Query: 229 DIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALLKSTHPDWSPAAIK 288
DI+ PGV++ + +P S T+ +GTSM+ PH++G AAL+K +P WS I+
Sbjct: 191 DIVAPGVNVQSTYPGS---------TYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIR 241
Query: 289 SAIMTTADIV---NLEGKPIIN 307
+ + TA + NL G ++N
Sbjct: 242 NHLKNTATSLGSTNLYGSGLVN 263
>pdb|1AH2|A Chain A, Serine Protease Pb92 From Bacillus Alcalophilus, Nmr, 18
Structures
Length = 269
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 12/82 (14%)
Query: 229 DIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALLKSTHPDWSPAAIK 288
DI+ PGV++ + +P S T+ +GTSM+ PH++G AAL+K +P WS I+
Sbjct: 191 DIVAPGVNVQSTYPGS---------TYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIR 241
Query: 289 SAIMTTADIV---NLEGKPIIN 307
+ + TA + NL G ++N
Sbjct: 242 NHLKNTATSLGSTNLYGSGLVN 263
>pdb|1NDU|A Chain A, Bacillus Lentus Subtilisin Variant S101gV104N
Length = 269
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 12/82 (14%)
Query: 229 DIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALLKSTHPDWSPAAIK 288
DI+ PGV++ + +P S T+ +GTSM+ PH++G AAL+K +P WS I+
Sbjct: 191 DIVAPGVNVQSTYPGS---------TYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIR 241
Query: 289 SAIMTTADIV---NLEGKPIIN 307
+ + TA + NL G ++N
Sbjct: 242 NHLKNTATSLGSTNLYGSGLVN 263
>pdb|1NDQ|A Chain A, Bacillus Lentus Subtilisin
pdb|1TK2|A Chain A, Crystal Structure Of The Complex Formed Between Alkaline
Proteinase Savinase And Gramicidin S At 1.5a Resolution
pdb|1JEA|A Chain A, Altered Topology And Flexibility In Engineered Subtilisin
pdb|1SVN|A Chain A, Savinase
pdb|3BX1|A Chain A, Complex Between The Barley Alpha-AmylaseSUBTILISIN
Inhibitor And The Subtilisin Savinase
pdb|3BX1|B Chain B, Complex Between The Barley Alpha-AmylaseSUBTILISIN
Inhibitor And The Subtilisin Savinase
pdb|1GCI|A Chain A, The 0.78 Angstroms Structure Of A Serine Protease-Bacillus
Lentus Subtilisin
Length = 269
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 12/82 (14%)
Query: 229 DIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALLKSTHPDWSPAAIK 288
DI+ PGV++ + +P S T+ +GTSM+ PH++G AAL+K +P WS I+
Sbjct: 191 DIVAPGVNVQSTYPGS---------TYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIR 241
Query: 289 SAIMTTADIV---NLEGKPIIN 307
+ + TA + NL G ++N
Sbjct: 242 NHLKNTATSLGSTNLYGSGLVN 263
>pdb|1ST3|A Chain A, The Crystal Structure Of The Bacillus Lentus Alkaline
Protease, Subtilisin Bl, At 1.4 Angstroms Resolution
Length = 269
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 12/82 (14%)
Query: 229 DIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALLKSTHPDWSPAAIK 288
DI+ PGV++ + +P S T+ +GTSM+ PH++G AAL+K +P WS I+
Sbjct: 191 DIVAPGVNVQSTYPGS---------TYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIR 241
Query: 289 SAIMTTADIV---NLEGKPIIN 307
+ + TA + NL G ++N
Sbjct: 242 NHLKNTATSLGSTNLYGSGLVN 263
>pdb|1C9N|A Chain A, Bacillus Lentus Substilisin Variant (Ser 87)
K27rV104YN123ST274A
Length = 269
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 229 DIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALLKSTHPDWSPAAIK 288
DI+ PGV++ + +P S T+ +GT M+ PH++G AAL+K +P WS I+
Sbjct: 191 DIVAPGVNVQSTYPGS---------TYASLNGTXMATPHVAGAAALVKQKNPSWSNVQIR 241
Query: 289 SAIMTTADIV---NLEGKPIIN 307
+ + TA + NL G ++N
Sbjct: 242 NHLKNTATSLGSTNLYGSGLVN 263
>pdb|1MEE|A Chain A, The Complex Between The Subtilisin From A Mesophilic
Bacterium And The Leech Inhibitor Eglin-C
Length = 275
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 20/112 (17%)
Query: 199 LRTGNKKSAPEVASLSARGPNKVSPGILKPDIIGPGVSILAAWPSSQENITKTKATFEIA 258
+ G SA + AS S+ G + D++ PGVSI + P T+
Sbjct: 175 IAVGAVNSANQRASFSSAGS--------ELDVMAPGVSIQSTLPG---------GTYGAY 217
Query: 259 DGTSMSCPHLSGIAALLKSTHPDWSPAAIKSAIMTTADIVNLE---GKPIIN 307
+GTSM+ PH++G AAL+ S HP W+ A ++ + +TA + GK +IN
Sbjct: 218 NGTSMATPHVAGAAALILSKHPTWTNAQVRDRLESTATYLGSSFYYGKGLIN 269
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 2 VDVISISYGSPPLPFYDDPIASAAFTAVRNGIFVSCAAGNKGPDPSSSTNGAP 54
+DVI++S G P + + AV +GI V+ AAGN+G S+ST G P
Sbjct: 119 MDVINMSLGGPT---GSTALKTVVDKAVSSGIVVAAAAGNEGSSGSTSTVGYP 168
>pdb|1IAV|A Chain A, Structure On Native (Asn 87) Subtilisin From Bacillus
Lentus
Length = 269
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 229 DIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALLKSTHPDWSPAAIK 288
DI+ PGV++ + +P S T+ +GT M+ PH++G AAL+K +P WS I+
Sbjct: 191 DIVAPGVNVQSTYPGS---------TYASLNGTXMATPHVAGAAALVKQKNPSWSNVQIR 241
Query: 289 SAIMTTADIV---NLEGKPIIN 307
+ + TA + NL G ++N
Sbjct: 242 NHLKNTATSLGSTNLYGSGLVN 263
>pdb|1DUI|A Chain A, Subtilisin Bpn' From Bacillus Amyloliquefaciens, Crystal
Growth Mutant
Length = 266
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 198 LLRTGNKKSAPEVASLSARGPNKVSPGILKPDIIGPGVSILAAWPSSQENITKTKATFEI 257
++ G S+ + AS S+ GP + D++ PGVSI + P ++ +
Sbjct: 165 VIAVGAVDSSNQRASFSSVGP--------ELDVMAPGVSICSTLPGNK---------YGA 207
Query: 258 ADGTSMSCPHLSGIAALLKSTHPDWSPAAIKSAIM-TTADIVN--LEGKPIIN 307
GTSM+ PH++G AAL+ S HP+W+ ++S++ TT + N GK +IN
Sbjct: 208 KSGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGNSFYYGKGLIN 260
>pdb|2SNI|E Chain E, Structural Comparison Of Two Serine Proteinase-Protein
Inhibitor Complexes. Eglin-C-Subtilisin Carlsberg And
Ci-2- Subtilisin Novo
Length = 275
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 20/113 (17%)
Query: 198 LLRTGNKKSAPEVASLSARGPNKVSPGILKPDIIGPGVSILAAWPSSQENITKTKATFEI 257
++ G S+ + AS S+ GP + D++ PGVSI + P ++ +
Sbjct: 174 VIAVGAVDSSNQRASFSSVGP--------ELDVMAPGVSIQSTLPGNK---------YGA 216
Query: 258 ADGTSMSCPHLSGIAALLKSTHPDWSPAAIKSAIMTTADIVN---LEGKPIIN 307
+GTSM+ PH++G AAL+ S HP+W+ ++S++ T + GK +IN
Sbjct: 217 YNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLQNTTTKLGDSFYYGKGLIN 269
>pdb|2SBT|A Chain A, A Comparison Of The Three-Dimensional Structures Of
Subtilisin Bpn And Subtilisin Novo
pdb|1SBT|A Chain A, Atomic Coordinates For Subtilisin Bpn (Or Novo)
Length = 275
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 20/113 (17%)
Query: 198 LLRTGNKKSAPEVASLSARGPNKVSPGILKPDIIGPGVSILAAWPSSQENITKTKATFEI 257
++ G S+ + AS S+ GP + D++ PGVSI + P ++ +
Sbjct: 174 VIAVGAVDSSNQRASFSSVGP--------ELDVMAPGVSIQSTLPGNK---------YGA 216
Query: 258 ADGTSMSCPHLSGIAALLKSTHPDWSPAAIKSAIMTTADIVN---LEGKPIIN 307
+GTSM+ PH++G AAL+ S HP+W+ ++S++ T + GK +IN
Sbjct: 217 YNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLQNTTTKLGDSFYYGKGLIN 269
>pdb|1C9M|A Chain A, Bacillus Lentus Subtilsin (Ser 87) N76dS103AV104I
Length = 269
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 229 DIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALLKSTHPDWSPAAIK 288
DI+ PGV++ + +P S T+ +GT M+ PH++G AAL+K +P WS I+
Sbjct: 191 DIVAPGVNVQSTYPGS---------TYASLNGTXMATPHVAGAAALVKQKNPSWSNVQIR 241
Query: 289 SAIMTTADIV---NLEGKPIIN 307
+ + TA + NL G ++N
Sbjct: 242 NHLKNTATSLGSTNLYGSGLVN 263
>pdb|1Q5P|A Chain A, S156e/s166d Variant Of Bacillus Lentus Subtilisin
Length = 269
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 229 DIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALLKSTHPDWSPAAIK 288
DI+ PGV++ + +P S T+ +GT M+ PH++G AAL+K +P WS I+
Sbjct: 191 DIVAPGVNVQSTYPGS---------TYASLNGTXMATPHVAGAAALVKQKNPSWSNVQIR 241
Query: 289 SAIMTTADIV---NLEGKPIIN 307
+ + TA + NL G ++N
Sbjct: 242 NHLKNTATSLGSTNLYGSGLVN 263
>pdb|1SUE|A Chain A, Subtilisin Bpn' From Bacillus Amyloliquefaciens, Mutant
Length = 266
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 20/113 (17%)
Query: 198 LLRTGNKKSAPEVASLSARGPNKVSPGILKPDIIGPGVSILAAWPSSQENITKTKATFEI 257
++ G S+ + AS S+ GP + D++ PGVSI + P ++ +
Sbjct: 165 VIAVGAVDSSNQRASFSSVGP--------ELDVMAPGVSICSTLPGNK---------YGA 207
Query: 258 ADGTSMSCPHLSGIAALLKSTHPDWSPAAIKSAIMTTADIVN---LEGKPIIN 307
GTSM+ PH++G AAL+ S HP+W+ ++S++ T + GK +IN
Sbjct: 208 KSGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGDSFYYGKGLIN 260
>pdb|1YJB|A Chain A, Subtilisin Bpn' 8397+1 (E.C. 3.4.21.14) (Mutant With Met
50 Replaced By Phe, Asn 76 Replaced By Asp, Gly 169
Replaced By Ala, Gln 206 Replaced By Cys, Asn 218
Replaced By Ser And Lys 256 Replaced By Tyr) (M50f,
N76d, G169a, Q206c, N218s, And K256y) In 35%
Dimethylformamide
pdb|1YJA|A Chain A, Subtilisin Bpn' 8397+1 (E.C. 3.4.21.14) (Mutant With Met
50 Replaced By Phe, Asn 76 Replaced By Asp, Gly 169
Replaced By Ala, Gln 206 Replaced By Cys, Asn 218
Replaced By Ser And Lys 256 Replaced By Tyr) (M50f,
N76d, G169a, Q206c, N218s, And K256y) In 20%
Dimethylformamide
pdb|1SBH|A Chain A, Subtilisin Bpn' 8397+1 (E.C. 3.4.21.14) Mutant (M50f,
N76d, G169a, Q206c, N218s, K256y)
pdb|1YJC|A Chain A, Subtilisin Bpn' 8397+1 (e.c. 3.4.21.14) (mutant With Met
50 Replaced By Phe, Asn 76 Replaced By Asp, Gly 169
Replaced By Ala, Gln 206 Replaced By Cys, Asn 218
Replaced By Ser And Lys 256 Replaced By Tyr) (m50f,
N76d, G169a, Q206c, N218s, And K256y) In 50%
Dimethylformamide
Length = 275
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 20/113 (17%)
Query: 198 LLRTGNKKSAPEVASLSARGPNKVSPGILKPDIIGPGVSILAAWPSSQENITKTKATFEI 257
++ G S+ + AS S+ GP + D++ PGVSI + P ++ +
Sbjct: 174 VIAVGAVDSSNQRASFSSVGP--------ELDVMAPGVSIXSTLPGNK---------YGA 216
Query: 258 ADGTSMSCPHLSGIAALLKSTHPDWSPAAIKSAIMTTADIVN---LEGKPIIN 307
GTSM+ PH++G AAL+ S HP+W+ ++S++ T + GK +IN
Sbjct: 217 YSGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTYLGDSFYYGKGLIN 269
>pdb|1AQN|A Chain A, Subtilisin Mutant 8324
pdb|1AU9|A Chain A, Subtilisin Bpn' Mutant 8324 In Citrate
Length = 275
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 20/113 (17%)
Query: 198 LLRTGNKKSAPEVASLSARGPNKVSPGILKPDIIGPGVSILAAWPSSQENITKTKATFEI 257
++ G S+ + AS S+ GP + D++ PGVSI + P ++ +
Sbjct: 174 VIAVGAVDSSNQRASFSSVGP--------ELDVMAPGVSICSTLPGNK---------YGA 216
Query: 258 ADGTSMSCPHLSGIAALLKSTHPDWSPAAIKSAIMTTADIVN---LEGKPIIN 307
GTSM+ PH++G AAL+ S HP+W+ ++S++ T + GK +IN
Sbjct: 217 KSGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGDSFYYGKGLIN 269
>pdb|1S01|A Chain A, Large Increases In General Stability For Subtilisin
Bpn(Prime) Through Incremental Changes In The Free
Energy Of Unfolding
Length = 275
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 20/113 (17%)
Query: 198 LLRTGNKKSAPEVASLSARGPNKVSPGILKPDIIGPGVSILAAWPSSQENITKTKATFEI 257
++ G S+ + AS S+ GP + D++ PGVSI + P ++ +
Sbjct: 174 VIAVGAVDSSNQRASFSSVGP--------ELDVMAPGVSICSTLPGNK---------YGA 216
Query: 258 ADGTSMSCPHLSGIAALLKSTHPDWSPAAIKSAIMTTADIVN---LEGKPIIN 307
GTSM+ PH++G AAL+ S HP+W+ ++S++ T + GK +IN
Sbjct: 217 KSGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGDSFYYGKGLIN 269
>pdb|2SIC|E Chain E, Refined Crystal Structure Of The Complex Of Subtilisin
Bpn' And Streptomyces Subtilisin Inhibitor At 1.8
Angstroms Resolution
pdb|1SIB|E Chain E, Refined Crystal Structures Of Subtilisin Novo In Complex
With Wild-Type And Two Mutant Eglins. Comparison With
Other Serine Proteinase Inhibitor Complexes
pdb|1SBN|E Chain E, Refined Crystal Structures Of Subtilisin Novo In Complex
With Wild-Type And Two Mutant Eglins. Comparison With
Other Serine Proteinase Inhibitor Complexes
pdb|3SIC|E Chain E, Molecular Recognition At The Active Site Of Subtilisin
Bpn': Crystallographic Studies Using Genetically
Engineered Proteinaceous Inhibitor Ssi (Streptomyces
Subtilisin Inhibitor)
pdb|5SIC|E Chain E, Molecular Recognition At The Active Site Of Subtilisin
Bpn': Crystallographic Studies Using Genetically
Engineered Proteinaceous Inhibitor Ssi (Streptomyces
Subtilisin Inhibitor)
pdb|1SUP|A Chain A, Subtilisin Bpn' At 1.6 Angstroms Resolution: Analysis Of
Discrete Disorder And Comparison Of Crystal Forms
pdb|2ST1|A Chain A, The Three-dimensional Structure Of Bacillus
Amyloliquefaciens Subtilisin At 1.8 Angstroms And An
Analysis Of The Structural Consequences Of Peroxide
Inactivation
Length = 275
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 20/113 (17%)
Query: 198 LLRTGNKKSAPEVASLSARGPNKVSPGILKPDIIGPGVSILAAWPSSQENITKTKATFEI 257
++ G S+ + AS S+ GP + D++ PGVSI + P ++ +
Sbjct: 174 VIAVGAVDSSNQRASFSSVGP--------ELDVMAPGVSIQSTLPGNK---------YGA 216
Query: 258 ADGTSMSCPHLSGIAALLKSTHPDWSPAAIKSAIMTTADIVN---LEGKPIIN 307
+GTSM+ PH++G AAL+ S HP+W+ ++S++ T + GK +IN
Sbjct: 217 YNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGDSFYYGKGLIN 269
>pdb|1LW6|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 At 1.5 Angstrom Resolution
pdb|1TM1|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2
pdb|1TM3|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59k Mutant
pdb|1TM4|E Chain E, Crystal Structure Of The Complex Of Subtilsin Bpn'with
Chymotrypsin Inhibitor 2 M59g Mutant
pdb|1TM5|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59a Mutant
pdb|1TM7|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59y Mutant
pdb|1TMG|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59f Mutant
pdb|1TO1|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 Y61a Mutant
pdb|1TO2|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59k, In Ph 9 Cryosoak
pdb|1Y1K|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 T58a Mutant
pdb|1Y33|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 T58p Mutant
pdb|1Y34|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 E60a Mutant
pdb|1Y3B|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 E60s Mutant
pdb|1Y3C|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 R62a Mutant
pdb|1Y3D|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 R67a Mutant
pdb|1Y3F|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 F69a Mutant
pdb|1Y48|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 R65a Mutant
pdb|1Y4A|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59r/e60s Mutant
pdb|1Y4D|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59rE60S MUTANT
Length = 281
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 20/113 (17%)
Query: 198 LLRTGNKKSAPEVASLSARGPNKVSPGILKPDIIGPGVSILAAWPSSQENITKTKATFEI 257
++ G S+ + AS S+ GP + D++ PGVSI + P ++ +
Sbjct: 174 VIAVGAVDSSNQRASFSSVGP--------ELDVMAPGVSIQSTLPGNK---------YGA 216
Query: 258 ADGTSMSCPHLSGIAALLKSTHPDWSPAAIKSAIMTTADIVN---LEGKPIIN 307
+GTSM+ PH++G AAL+ S HP+W+ ++S++ T + GK +IN
Sbjct: 217 YNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGDSFYYGKGLIN 269
>pdb|1S02|A Chain A, Effects Of Engineered Salt Bridges On The Stability Of
Subtilisin Bpn'
Length = 275
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 20/113 (17%)
Query: 198 LLRTGNKKSAPEVASLSARGPNKVSPGILKPDIIGPGVSILAAWPSSQENITKTKATFEI 257
++ G S+ + AS S+ GP + D++ PGVSI + P ++ +
Sbjct: 174 VIAVGAVDSSNQRASFSSVGP--------ELDVMAPGVSIQSTLPGNK---------YGA 216
Query: 258 ADGTSMSCPHLSGIAALLKSTHPDWSPAAIKSAIMTTADIVN---LEGKPIIN 307
+GTSM+ PH++G AAL+ S HP+W+ ++S++ T + GK +IN
Sbjct: 217 YNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGDSFYYGKGLIN 269
>pdb|1SPB|S Chain S, Subtilisin Bpn' Prosegment (77 Residues) Complexed With A
Mutant Subtilisin Bpn' (266 Residues). Crystal Ph 4.6.
Crystallization Temperature 20 C Diffraction
Temperature- 160 C
Length = 266
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 20/113 (17%)
Query: 198 LLRTGNKKSAPEVASLSARGPNKVSPGILKPDIIGPGVSILAAWPSSQENITKTKATFEI 257
++ G S+ + AS S+ GP + D++ PGVSI++ P ++ +
Sbjct: 165 VIAVGAVDSSNQRASFSSVGP--------ELDVMAPGVSIVSTLPGNK---------YGA 207
Query: 258 ADGTSMSCPHLSGIAALLKSTHPDWSPAAIKSAIMTTADIVN---LEGKPIIN 307
GT+M+ PH++G AAL+ S HP+W+ ++S++ T + GK +IN
Sbjct: 208 KSGTAMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGDSFYYGKGLIN 260
>pdb|1SUA|A Chain A, Subtilisin Bpn'
Length = 266
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 20/113 (17%)
Query: 198 LLRTGNKKSAPEVASLSARGPNKVSPGILKPDIIGPGVSILAAWPSSQENITKTKATFEI 257
++ G S+ + AS S+ GP + D++ PGVSI++ P ++ +
Sbjct: 165 VIAVGAVDSSNQRASFSSVGP--------ELDVMAPGVSIVSTLPGNK---------YGA 207
Query: 258 ADGTSMSCPHLSGIAALLKSTHPDWSPAAIKSAIMTTADIVN---LEGKPIIN 307
GT+M+ PH++G AAL+ S HP+W+ ++S++ T + GK +IN
Sbjct: 208 KSGTAMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGDSFYYGKGLIN 260
>pdb|1AK9|A Chain A, Subtilisin Mutant 8321
Length = 275
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 20/113 (17%)
Query: 198 LLRTGNKKSAPEVASLSARGPNKVSPGILKPDIIGPGVSILAAWPSSQENITKTKATFEI 257
++ G S+ + AS S+ GP + D++ PGVSI + P ++ +
Sbjct: 174 VIAVGAVDSSNQRASFSSVGP--------ELDVMAPGVSIQSTLPGNK---------YGA 216
Query: 258 ADGTSMSCPHLSGIAALLKSTHPDWSPAAIKSAIMTTADIVN---LEGKPIIN 307
GTSM+ PH++G AAL+ S HP+W+ ++S++ T + GK +IN
Sbjct: 217 KSGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGDSFYYGKGLIN 269
>pdb|1SBI|A Chain A, Subtilisin Bpn' 8397 (E.C. 3.4.21.14) Mutant (M50f, N76d,
G169a, Q206c, N218s)
Length = 275
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 20/113 (17%)
Query: 198 LLRTGNKKSAPEVASLSARGPNKVSPGILKPDIIGPGVSILAAWPSSQENITKTKATFEI 257
++ G S+ + AS S+ GP + D++ PGVSI + P ++ +
Sbjct: 174 VIAVGAVDSSNQRASFSSVGP--------ELDVMAPGVSIXSTLPGNK---------YGA 216
Query: 258 ADGTSMSCPHLSGIAALLKSTHPDWSPAAIKSAIMTTADIVN---LEGKPIIN 307
GTSM+ PH++G AAL+ S HP+W+ ++S++ T + GK +IN
Sbjct: 217 YSGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGDSFYYGKGLIN 269
>pdb|4DWW|A Chain A, Crystal Structure Of Nattokinase From Bacillus Subtilis
Natto
Length = 275
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 12/82 (14%)
Query: 229 DIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALLKSTHPDWSPAAIK 288
D++ PGVSI + P T+ +GT M+ PH++G AAL+ S HP W+ A ++
Sbjct: 197 DVMAPGVSIQSTLPG---------GTYGAYNGTXMATPHVAGAAALILSKHPTWTNAQVR 247
Query: 289 SAIMTTADIVN---LEGKPIIN 307
+ +TA + GK +IN
Sbjct: 248 DRLESTATYLGNSFYYGKGLIN 269
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 2 VDVISISYGSPPLPFYDDPIASAAFTAVRNGIFVSCAAGNKGPDPSSSTNGAP 54
+DVI++S G P + + AV +GI V+ AAGN+G S+ST G P
Sbjct: 119 MDVINMSLGGPT---GSTALKTVVDKAVSSGIVVAAAAGNEGSSGSTSTVGYP 168
>pdb|3F49|S Chain S, Anion-Triggered Engineered Subtilisin Subt_bacam
Length = 266
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 12/82 (14%)
Query: 229 DIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALLKSTHPDWSPAAIK 288
D++ PGVSI + P + + GTSM+ PH++G AAL+ S HP+W+ ++
Sbjct: 188 DVMAPGVSICSTLPGGK---------YGALSGTSMASPHVAGAAALILSKHPNWTNTQVR 238
Query: 289 SAIMTTADIVN---LEGKPIIN 307
S++ TA + GK +IN
Sbjct: 239 SSLENTATKLGDSFYYGKGLIN 260
>pdb|1SCJ|A Chain A, Crystal Structure Of Subtilisin-Propeptide Complex
Length = 275
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 12/82 (14%)
Query: 229 DIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALLKSTHPDWSPAAIK 288
D++ PGVSI + P T+ +GT M+ PH++G AAL+ S HP W+ A ++
Sbjct: 197 DVMAPGVSIQSTLPG---------GTYGAYNGTCMATPHVAGAAALILSKHPTWTNAQVR 247
Query: 289 SAIMTTADIVN---LEGKPIIN 307
+ +TA + GK +IN
Sbjct: 248 DRLESTATYLGNSFYYGKGLIN 269
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 2 VDVISISYGSPPLPFYDDPIASAAFTAVRNGIFVSCAAGNKGPDPSSSTNGAP 54
+DVI++S G P + + AV +GI V+ AAGN+G S+ST G P
Sbjct: 119 MDVINMSLGGPT---GSTALKTVVDKAVSSGIVVAAAAGNEGSSGSTSTVGYP 168
>pdb|1GNV|A Chain A, Calcium Independent Subtilisin Bpn' Mutant
Length = 266
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 20/113 (17%)
Query: 198 LLRTGNKKSAPEVASLSARGPNKVSPGILKPDIIGPGVSILAAWPSSQENITKTKATFEI 257
++ G S+ + AS S+ GP + D++ PGVSI + P ++ +
Sbjct: 165 VIAVGAVDSSNQRASFSSVGP--------ELDVMAPGVSICSTLPGNK---------YGA 207
Query: 258 ADGTSMSCPHLSGIAALLKSTHPDWSPAAIKSAIMTTADIVN---LEGKPIIN 307
GT M+ PH++G AAL+ S HP+W+ ++S++ T + GK +IN
Sbjct: 208 KSGTXMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGDSFYYGKGLIN 260
>pdb|1UBN|A Chain A, Selenosubtilisin Bpn
Length = 275
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 20/113 (17%)
Query: 198 LLRTGNKKSAPEVASLSARGPNKVSPGILKPDIIGPGVSILAAWPSSQENITKTKATFEI 257
++ G S+ + AS S+ GP + D++ PGVSI + P ++ +
Sbjct: 174 VIAVGAVDSSNQRASFSSVGP--------ELDVMAPGVSIQSTLPGNK---------YGA 216
Query: 258 ADGTSMSCPHLSGIAALLKSTHPDWSPAAIKSAIMTTADIVN---LEGKPIIN 307
+GT M+ PH++G AAL+ S HP+W+ ++S++ T + GK +IN
Sbjct: 217 YNGTXMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGDSFYYGKGLIN 269
>pdb|1V5I|A Chain A, Crystal Structure Of Serine Protease Inhibitor Poia1 In
Complex With Subtilisin Bpn'
Length = 275
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 20/113 (17%)
Query: 198 LLRTGNKKSAPEVASLSARGPNKVSPGILKPDIIGPGVSILAAWPSSQENITKTKATFEI 257
++ G S+ + AS S+ GP + D++ PGVSI + P ++ +
Sbjct: 174 VIAVGAVDSSNQRASFSSVGP--------ELDVMAPGVSIQSTLPGNK---------YGA 216
Query: 258 ADGTSMSCPHLSGIAALLKSTHPDWSPAAIKSAIMTTADIVN---LEGKPIIN 307
+GT M+ PH++G AAL+ S HP+W+ ++S++ T + GK +IN
Sbjct: 217 YNGTXMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGDSFYYGKGLIN 269
>pdb|1GNS|A Chain A, Subtilisin Bpn'
Length = 263
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 20/113 (17%)
Query: 198 LLRTGNKKSAPEVASLSARGPNKVSPGILKPDIIGPGVSILAAWPSSQENITKTKATFEI 257
++ G S+ + AS S+ GP + D++ PGVSI + P ++ +
Sbjct: 162 VIAVGAVDSSNQRASFSSVGP--------ELDVMAPGVSIWSTLPGNK---------YGA 204
Query: 258 ADGTSMSCPHLSGIAALLKSTHPDWSPAAIKSAIMTTADIVN---LEGKPIIN 307
GT M+ PH++G AAL+ S HP+W+ ++S++ T + GK +IN
Sbjct: 205 KSGTXMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGDSFYYGKGLIN 257
>pdb|1SUC|A Chain A, Calcium-Independent Subtilisin By Design
pdb|1SUD|A Chain A, Calcium-Independent Subtilisin By Design
Length = 275
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 20/113 (17%)
Query: 198 LLRTGNKKSAPEVASLSARGPNKVSPGILKPDIIGPGVSILAAWPSSQENITKTKATFEI 257
++ G S+ + AS S+ GP + D++ PGVSI + P ++ +
Sbjct: 174 VIAVGAVDSSNQRASFSSVGP--------ELDVMAPGVSIQSTLPGNK---------YGA 216
Query: 258 ADGTSMSCPHLSGIAALLKSTHPDWSPAAIKSAIMTTADIVN---LEGKPIIN 307
GT M+ PH++G AAL+ S HP+W+ ++S++ T + GK +IN
Sbjct: 217 KSGTXMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGDSFYYGKGLIN 269
>pdb|4DZT|A Chain A, Aqualysin I: The Crystal Structure Of A Serine Protease
From An Extreme Thermophile, Thermus Aquaticus Yt-1
Length = 276
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 7/74 (9%)
Query: 229 DIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALLKSTHPDWSPAAIK 288
D+ PG SI +AW +S + T+T +GTSM+ PH++G+AAL +P +PA++
Sbjct: 196 DLFAPGASIPSAWYTS-DTATQTL------NGTSMATPHVAGVAALYLEQNPSATPASVA 248
Query: 289 SAIMTTADIVNLEG 302
SAI+ A L G
Sbjct: 249 SAILNGATTGRLSG 262
>pdb|3CNQ|S Chain S, Prosubtilisin Substrate Complex Of Subtilisin Subt_bacam
pdb|3BGO|S Chain S, Azide Complex Of Engineered Subtilisin Subt_bacam
pdb|3CO0|S Chain S, Substrate Complex Of Fluoride-Sensitive Engineered
Subtilisin Subt_bacam
Length = 266
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 12/82 (14%)
Query: 229 DIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALLKSTHPDWSPAAIK 288
D++ PGVSI + P + + GT+M+ PH++G AAL+ S HP+W+ ++
Sbjct: 188 DVMAPGVSICSTLPGGK---------YGALSGTAMASPHVAGAAALILSKHPNWTNTQVR 238
Query: 289 SAIMTTADIVN---LEGKPIIN 307
S++ TA + GK +IN
Sbjct: 239 SSLENTATKLGDSFYYGKGLIN 260
>pdb|1SUB|A Chain A, Calcium-Independent Subtilisin By Design
Length = 275
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 20/113 (17%)
Query: 198 LLRTGNKKSAPEVASLSARGPNKVSPGILKPDIIGPGVSILAAWPSSQENITKTKATFEI 257
++ G S+ + AS S+ GP + D++ PGVSI + P ++ +
Sbjct: 174 VIAVGAVDSSNQRASFSSVGP--------ELDVMAPGVSIQSTLPGNK---------YGA 216
Query: 258 ADGTSMSCPHLSGIAALLKSTHPDWSPAAIKSAIMTTADIVN---LEGKPIIN 307
GT M+ PH++G AAL+ S HP+W+ ++S++ T + GK +IN
Sbjct: 217 YSGTXMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGDSFYYGKGLIN 269
>pdb|1A2Q|A Chain A, Subtilisin Bpn' Mutant 7186
Length = 275
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 20/113 (17%)
Query: 198 LLRTGNKKSAPEVASLSARGPNKVSPGILKPDIIGPGVSILAAWPSSQENITKTKATFEI 257
++ G S+ + AS S+ GP + D++ PGVSI + P ++ +
Sbjct: 174 VIAVGAVDSSNQRASFSSVGP--------ELDVMAPGVSIQSTLPGNK---------YGA 216
Query: 258 ADGTSMSCPHLSGIAALLKSTHPDWSPAAIKSAIMTTADIVN---LEGKPIIN 307
GT M+ PH++G AAL+ S HP+W+ ++S++ T + GK +IN
Sbjct: 217 YSGTXMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGDSFYYGKGLIN 269
>pdb|1ST2|A Chain A, The Three-Dimensional Structure Of Bacillus
Amyloliquefaciens Subtilisin At 1.8 Angstroms And An
Analysis Of The Structural Consequences Of Peroxide
Inactivation
Length = 275
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 20/113 (17%)
Query: 198 LLRTGNKKSAPEVASLSARGPNKVSPGILKPDIIGPGVSILAAWPSSQENITKTKATFEI 257
++ G S+ + AS S+ GP + D++ PGVSI + P ++ +
Sbjct: 174 VIAVGAVDSSNQRASFSSVGP--------ELDVMAPGVSIQSTLPGNK---------YGA 216
Query: 258 ADGTSMSCPHLSGIAALLKSTHPDWSPAAIKSAIMTTADIVN---LEGKPIIN 307
+GTS + PH++G AAL+ S HP+W+ ++S++ T + GK +IN
Sbjct: 217 YNGTSXASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGDSFYYGKGLIN 269
>pdb|3QTL|A Chain A, Structural Basis For Dual-Inhibition Mechanism Of A
Non-Classical Kazal-Type Serine Protease Inhibitor From
Horseshoe Crab In Complex With Subtilisin
pdb|3QTL|B Chain B, Structural Basis For Dual-Inhibition Mechanism Of A
Non-Classical Kazal-Type Serine Protease Inhibitor From
Horseshoe Crab In Complex With Subtilisin
pdb|3QTL|C Chain C, Structural Basis For Dual-Inhibition Mechanism Of A
Non-Classical Kazal-Type Serine Protease Inhibitor From
Horseshoe Crab In Complex With Subtilisin
pdb|4HX2|A Chain A, Crystal Structure Of Streptomyces Caespitosus Sermetstatin
In Complex With Bacillus Licheniformis Subtilisin
pdb|4HX2|C Chain C, Crystal Structure Of Streptomyces Caespitosus Sermetstatin
In Complex With Bacillus Licheniformis Subtilisin
Length = 274
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 47/82 (57%), Gaps = 12/82 (14%)
Query: 229 DIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALLKSTHPDWSPAAIK 288
+++ PG + + +P++ T+ +GTSM+ PH++G AAL+ S HP+ S + ++
Sbjct: 196 EVMAPGAGVYSTYPTN---------TYATLNGTSMASPHVAGAAALILSKHPNLSASQVR 246
Query: 289 SAIMTTADIVNLE---GKPIIN 307
+ + +TA + GK +IN
Sbjct: 247 NRLSSTATYLGSSFYYGKGLIN 268
>pdb|1CSE|E Chain E, The High-Resolution X-Ray Crystal Structure Of The Complex
Formed Between Subtilisin Carlsberg And Eglin C, An
Elastase Inhibitor From The Leech Hirudo Medicinalis.
Structural Analysis, Subtilisin Structure And Interface
Geometry
pdb|2SEC|E Chain E, Structural Comparison Of Two Serine Proteinase-Protein
Inhibitor Complexes. Eglin-C-Subtilisin Carlsberg And
Ci-2- Subtilisin Novo
pdb|1OYV|A Chain A, Crystal Structure Of Tomato Inhibitor-Ii In A Ternary
Complex With Subtilisin Carlsberg
pdb|1OYV|B Chain B, Crystal Structure Of Tomato Inhibitor-Ii In A Ternary
Complex With Subtilisin Carlsberg
pdb|1R0R|E Chain E, 1.1 Angstrom Resolution Structure Of The Complex Between
The Protein Inhibitor, Omtky3, And The Serine Protease,
Subtilisin Carlsberg
pdb|1AF4|A Chain A, Crystal Structure Of Subtilisin Carlsberg In Anhydrous
Dioxane
pdb|1BE6|A Chain A, Trans-Cinnamoyl-Subtilisin In Anhydrous Acetonitrile
pdb|1BE8|A Chain A, Trans-Cinnamoyl-Subtilisin In Water
pdb|1BFK|A Chain A, Crystal Structure Of Subtilisin Carlsberg In 40%
Acetonitrile
pdb|1BFU|A Chain A, Subtilisin Carlsberg In 20% Dioxane
pdb|1SBC|A Chain A, The Refined Crystal Structure Of Subtilisin Carlsberg At
2.5 Angstroms Resolution
pdb|1SCA|A Chain A, Enzyme Crystal Structure In A Neat Organic Solvent
pdb|1SCB|A Chain A, Enzyme Crystal Structure In A Neat Organic Solvent
pdb|1SCD|A Chain A, X-Ray Crystal Structure Of Cross-Linked Subtilism
Carlsberg In Water Vs. Acetonitrile
pdb|2WUV|A Chain A, Crystallographic Analysis Of Counter-Ion Effects On
Subtilisin Enzymatic Action In Acetonitrile
pdb|2WUW|E Chain E, Crystallographic Analysis Of Counter-Ion Effects On
Subtilisin Enzymatic Action In Acetonitrile (Native
Data)
Length = 274
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 47/82 (57%), Gaps = 12/82 (14%)
Query: 229 DIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALLKSTHPDWSPAAIK 288
+++ PG + + +P++ T+ +GTSM+ PH++G AAL+ S HP+ S + ++
Sbjct: 196 EVMAPGAGVYSTYPTN---------TYATLNGTSMASPHVAGAAALILSKHPNLSASQVR 246
Query: 289 SAIMTTADIVNLE---GKPIIN 307
+ + +TA + GK +IN
Sbjct: 247 NRLSSTATYLGSSFYYGKGLIN 268
>pdb|1C3L|A Chain A, Subtilisin-Carlsberg Complexed With Xenon (8 Bar)
pdb|3UNX|A Chain A, Bond Length Analysis Of Asp, Glu And His Residues In
Subtilisin Carlsberg At 1.26a Resolution
Length = 274
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 12/82 (14%)
Query: 229 DIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALLKSTHPDWSPAAIK 288
+++ PG + + +P T T AT +GTSM+ PH++G AAL+ S HP+ S + ++
Sbjct: 196 EVMAPGAGVYSTYP------TNTYATL---NGTSMASPHVAGAAALILSKHPNLSASQVR 246
Query: 289 SAIMTTADIVNLE---GKPIIN 307
+ + +TA + GK +IN
Sbjct: 247 NRLSSTATYLGSSFYYGKGLIN 268
>pdb|1YU6|A Chain A, Crystal Structure Of The Subtilisin Carlsberg:omtky3
Complex
pdb|1YU6|B Chain B, Crystal Structure Of The Subtilisin Carlsberg:omtky3
Complex
Length = 275
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 12/82 (14%)
Query: 229 DIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALLKSTHPDWSPAAIK 288
+++ PG + + +P T T AT +GTSM+ PH++G AAL+ S HP+ S + ++
Sbjct: 197 EVMAPGAGVYSTYP------TNTYATL---NGTSMASPHVAGAAALILSKHPNLSASQVR 247
Query: 289 SAIMTTADIVNLE---GKPIIN 307
+ + +TA + GK +IN
Sbjct: 248 NRLSSTATYLGSSFYYGKGLIN 269
>pdb|4GI3|A Chain A, Crystal Structure Of Greglin In Complex With Subtilisin
Length = 275
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 12/82 (14%)
Query: 229 DIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALLKSTHPDWSPAAIK 288
+++ PG + + +P T T AT +GTSM+ PH++G AAL+ S HP+ S + ++
Sbjct: 197 EVMAPGAGVYSTYP------TNTYATL---NGTSMASPHVAGAAALILSKHPNLSASQVR 247
Query: 289 SAIMTTADIVNLE---GKPIIN 307
+ + +TA + GK +IN
Sbjct: 248 NRLSSTATYLGSSFYYGKGLIN 269
>pdb|1SCN|E Chain E, Inactivation Of Subtilisin Carlsberg By
N-(Tert-Butoxycarbonyl-Alanyl-
Prolyl-Phenylalanyl)-O-Benzol Hydroxylamine: Formation
Of Covalent Enzyme-Inhibitor Linkage In The Form Of A
Carbamate Derivative
Length = 276
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 47/82 (57%), Gaps = 12/82 (14%)
Query: 229 DIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALLKSTHPDWSPAAIK 288
+++ PG + + +P++ T+ +GTSM+ PH++G AAL+ S HP+ S + ++
Sbjct: 196 EVMAPGAGVYSTYPTN---------TYATLNGTSMASPHVAGAAALILSKHPNLSASQVR 246
Query: 289 SAIMTTADIVNLE---GKPIIN 307
+ + +TA + GK +IN
Sbjct: 247 NRLSSTATYLGSSFYYGKGLIN 268
>pdb|1BH6|A Chain A, Subtilisin Dy In Complex With The Synthetic Inhibitor N-
Benzyloxycarbonyl-Ala-Pro-Phe-Chloromethyl Ketone
Length = 274
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 16/84 (19%)
Query: 229 DIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALLKSTHPDWSPAAIK 288
+++ PGVS+ + +PS+ T+ +GTSM+ PH++G AAL+ S +P S + ++
Sbjct: 196 EVMAPGVSVYSTYPSN---------TYTSLNGTSMASPHVAGAAALILSKYPTLSASQVR 246
Query: 289 SAIMTTADIVNLE-----GKPIIN 307
+ + +TA NL GK +IN
Sbjct: 247 NRLSSTA--TNLGDSFYYGKGLIN 268
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 25/117 (21%)
Query: 1 GVDVISISYGSPPLPFYDDPIASAAFTAVRNGIFVSCAAGNKGPDPSSSTNGAPW----I 56
G+DVI++S G P + A A +GI V AAGN G S +T G P +
Sbjct: 117 GLDVINMSLGGPS---GSTALKQAVDKAYASGIVVVAAAGNSGNSGSQNTIGYPAKYDSV 173
Query: 57 LTVGASTTDRSIVASAQLGNHATYDVEIL--------------FMLVNFTSMQLPLV 99
+ VGA ++++ + + +G+ ++E++ + +N TSM P V
Sbjct: 174 IAVGAVDSNKNRASFSSVGS----ELEVMAPGVSVYSTYPSNTYTSLNGTSMASPHV 226
>pdb|2B6N|A Chain A, The 1.8 A Crystal Structure Of A Proteinase K Like Enzyme
From A Psychrotroph Serratia Species
Length = 278
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 9/72 (12%)
Query: 229 DIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALLKSTHPDWSPAAIK 288
DI PG SI ++W T AT I+ GTSM+ PH++G+AAL +P+ SPA +
Sbjct: 198 DIYAPGSSITSSW------YTSNSATNTIS-GTSMASPHVAGVAALYLDENPNLSPAQVT 250
Query: 289 SAIMT--TADIV 298
+ + T TAD V
Sbjct: 251 NLLKTRATADKV 262
>pdb|3EIF|A Chain A, 1.9 Angstrom Crystal Structure Of The Active Form Of The
C5a Peptidase From Streptococcus Pyogenes (Scpa)
Length = 936
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 137/324 (42%), Gaps = 52/324 (16%)
Query: 1 GVDVISISYGSPPLPFYD--DPIASAAFTAVRNGIFVSCAAGNK-----------GPDPS 47
G VI++S+G+ L + + D A A G+ + +AGN P
Sbjct: 157 GAKVINMSFGNAALAYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPD 216
Query: 48 SSTNGAPW----ILTVGASTTDRSIVASAQLGNHATYDVEILFMLVNFTSMQLPLVYPGG 103
G P LTV + + D+ + +A + T D + M V T+ P
Sbjct: 217 YGVVGTPAAADSTLTVASYSPDKQLTETATV---KTDDHQAKEMPVLSTNRFEP-----N 268
Query: 104 RNSSAAFCLPGSLNN--IDVKGKVVVCERDGNMRRNETEYYVKEAGGAAMILISDKFDAY 161
+ A+ G + DVKGK+ + ER G++ + K+AG A +LI D D
Sbjct: 269 KAYDYAYANRGMKEDDFKDVKGKIALIER-GDIDFKDKIANAKKAG-AVGVLIYDNQDKG 326
Query: 162 SAILETHV--LPAVQVGYATGESIKAYINSTSSPTVAILLRTGNKKSAPEVASLSARGPN 219
I +V +PA + G +K NS + T + S +++ S+ G
Sbjct: 327 FPIELPNVDQMPAAFISRKDGLLLKD--NSKKTITFNATPKVLPTASDTKLSRFSSWGL- 383
Query: 220 KVSPGILKPDIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALLK--- 276
+ G +KPDI PG IL++ +++ + GTSMS P ++GI LL+
Sbjct: 384 -TADGNIKPDIAAPGQDILSSVANNK---------YAKLSGTSMSAPLVAGIMGLLQKQY 433
Query: 277 -STHPDWSPAA----IKSAIMTTA 295
+ +PD +P+ K +M++A
Sbjct: 434 ETQYPDMTPSERLDLAKKVLMSSA 457
>pdb|1SEL|A Chain A, Crystal Structure Of Selenosubtilisin At 2.0-Angstroms
Resolution
pdb|1SEL|B Chain B, Crystal Structure Of Selenosubtilisin At 2.0-Angstroms
Resolution
pdb|1AV7|A Chain A, Subtilisin Carlsberg L-Naphthyl-1-Acetamido Boronic Acid
Inhibitor Complex
pdb|1AVT|A Chain A, Subtilisin Carlsberg D-Para-Chlorophenyl-1-Acetamido
Boronic Acid Inhibitor Complex
pdb|1VSB|A Chain A, Subtilisin Carlsberg L-Para-Chlorophenyl-1-Acetamido
Boronic Acid Inhibitor Complex
pdb|3VSB|A Chain A, Subtilisin Carlsberg D-Naphthyl-1-Acetamido Boronic Acid
Inhibitor Complex
Length = 274
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 229 DIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALLKSTHPDWSPAAIK 288
+++ PG + + +P++ T+ +GT M+ PH++G AAL+ S HP+ S + ++
Sbjct: 196 EVMAPGAGVYSTYPTN---------TYATLNGTXMASPHVAGAAALILSKHPNLSASQVR 246
Query: 289 SAIMTTADIVNLE---GKPIIN 307
+ + +TA + GK +IN
Sbjct: 247 NRLSSTATYLGSSFYYGKGLIN 268
>pdb|1R6V|A Chain A, Crystal Structure Of Fervidolysin From Fervidobacterium
Pennivorans, A Keratinolytic Enzyme Related To
Subtilisin
Length = 671
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 233 PGVSILAAWPSSQ--------ENITKTKA-TFEIADGTSMSCPHLSGIAALLKSTHPDWS 283
PGV+IL+ P EN+ T T++ GTSM+ PH++G+ A+L P+
Sbjct: 343 PGVTILSTVPGEDSIGYEGHNENVPATNGGTYDYYQGTSMAAPHVTGVVAVLLQKFPNAK 402
Query: 284 PAAIKSAIMTTADIVNLEGKPIINNYNLL 312
P I+ + TA N G Y L+
Sbjct: 403 PWQIRKLLENTAFDFNGNGWDHDTGYGLV 431
>pdb|1THM|A Chain A, Crystal Structure Of Thermitase At 1.4 Angstroms
Resolution
Length = 279
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 15/88 (17%)
Query: 229 DIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALLKSTHPDWSPAAIK 288
D+ PG SI + +P+S T+ GTSM+ PH++G+A LL S S + I+
Sbjct: 201 DVAAPGSSIYSTYPTS---------TYASLSGTSMATPHVAGVAGLLASQGR--SASNIR 249
Query: 289 SAIMTTADIVNLEG----KPIINNYNLL 312
+AI TAD ++ G K +N Y +
Sbjct: 250 AAIENTADKISGTGTYWAKGRVNAYKAV 277
>pdb|1DBI|A Chain A, Crystal Structure Of A Thermostable Serine Protease
Length = 280
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 15/88 (17%)
Query: 229 DIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALLKSTHPDWSPAAIK 288
D++ PGV I++ T T + GTSM+ PH++G+AALL S + I+
Sbjct: 202 DVVAPGVDIVS---------TITGNRYAYMSGTSMASPHVAGLAALLASQGRN--NIEIR 250
Query: 289 SAIMTTADIVNLEGKPI----INNYNLL 312
AI TAD ++ G IN+YN +
Sbjct: 251 QAIEQTADKISGTGTYFKYGRINSYNAV 278
>pdb|1TEC|E Chain E, Crystallographic Refinement By Incorporation Of Molecular
Dynamics. The Thermostable Serine Protease Thermitase
Complexed With Eglin-C
pdb|2TEC|E Chain E, Molecular Dynamics Refinement Of A Thermitase-Eglin-C
Complex At 1.98 Angstroms Resolution And Comparison Of
Two Crystal Forms That Differ In Calcium Content
pdb|3TEC|E Chain E, Calcium Binding To Thermitase. Crystallographic Studies Of
Thermitase At 0, 5 And 100 Mm Calcium
Length = 279
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 11/74 (14%)
Query: 229 DIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALLKSTHPDWSPAAIK 288
D+ PG I + +P+S T+ GTSM+ PH++G+A LL S S + I+
Sbjct: 201 DVAAPGSWIYSTYPTS---------TYASLSGTSMATPHVAGVAGLLASQGR--SASNIR 249
Query: 289 SAIMTTADIVNLEG 302
+AI TAD ++ G
Sbjct: 250 AAIENTADKISGTG 263
>pdb|3VHQ|A Chain A, Crystal Structure Of The Ca6 Site Mutant Of
Pro-Sa-Subtilisin
Length = 398
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 56/132 (42%), Gaps = 32/132 (24%)
Query: 198 LLRTGNKKSAPEVASLSARGPNKVSPGILKPDIIGPGVSILAAWPSSQENITKTKATFEI 257
++ G S +AS S R +P++ PGV IL+ +P ++E
Sbjct: 279 VIAVGAIDSNDNIASFSNR----------QPEVSAPGVDILSTYPDD---------SYET 319
Query: 258 ADGTSMSCPHLSGIAALLKS-------------THPDWSPAAIKSAIMTTADIVNLEGKP 304
GT+M+ PH+SG+ AL+++ T D S ++ + TAD + G
Sbjct: 320 LMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADALGPTGWD 379
Query: 305 IINNYNLLPAEL 316
Y ++ A L
Sbjct: 380 ADYGYGVVRAAL 391
>pdb|2Z30|A Chain A, Crystal Structure Of Complex Form Between
Mat-Tk-Subtilisin And Tk- Propeptide
Length = 320
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 19/82 (23%)
Query: 198 LLRTGNKKSAPEVASLSARGPNKVSPGILKPDIIGPGVSILAAWPSSQENITKTKATFEI 257
++ G S +AS S R +P++ PGV IL+ +P ++E
Sbjct: 201 VIAVGAIDSNDNIASFSNR----------QPEVSAPGVDILSTYPDD---------SYET 241
Query: 258 ADGTSMSCPHLSGIAALLKSTH 279
GT+M+ PH+SG+ AL+++ +
Sbjct: 242 LMGTAMATPHVSGVVALIQAAY 263
>pdb|2Z56|A Chain A, Crystal Structure Of G56s-Propeptide:s324a-Subtilisin
Complex
pdb|2Z57|A Chain A, Crystal Structure Of G56e-Propeptide:s324a-Subtilisin
Complex
pdb|2Z58|A Chain A, Crystal Structure Of G56w-Propeptide:s324a-Subtilisin
Complex
Length = 318
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 19/82 (23%)
Query: 198 LLRTGNKKSAPEVASLSARGPNKVSPGILKPDIIGPGVSILAAWPSSQENITKTKATFEI 257
++ G S +AS S R +P++ PGV IL+ +P ++E
Sbjct: 199 VIAVGAIDSNDNIASFSNR----------QPEVSAPGVDILSTYPDD---------SYET 239
Query: 258 ADGTSMSCPHLSGIAALLKSTH 279
GT+M+ PH+SG+ AL+++ +
Sbjct: 240 LMGTAMATPHVSGVVALIQAAY 261
>pdb|1WMD|A Chain A, Crystal Structure Of Alkaline Serine Protease Kp-43 From
Bacillus Sp. Ksm-Kp43 (1.30 Angstrom, 100 K)
pdb|1WME|A Chain A, Crystal Structure Of Alkaline Serine Protease Kp-43 From
Bacillus Sp. Ksm-kp43 (1.50 Angstrom, 293 K)
Length = 434
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 209 EVASLSARGPNKVSPGILKPDIIGPGVSILAAWPSSQENIT---KTKATFEIADGTSMSC 265
VA S+RGP K G +KPD++ PG IL+A S + + + + GTSM+
Sbjct: 201 HVAQFSSRGPTK--DGRIKPDVMAPGTFILSARSSLAPDSSFWANHDSKYAYMGGTSMAT 258
Query: 266 PHLSGIAALLK 276
P ++G A L+
Sbjct: 259 PIVAGNVAQLR 269
>pdb|2Z2Z|A Chain A, Crystal Structure Of Unautoprocessed Form Of Tk-subtilisin
Soaked By 10mm Cacl2
Length = 395
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 19/82 (23%)
Query: 198 LLRTGNKKSAPEVASLSARGPNKVSPGILKPDIIGPGVSILAAWPSSQENITKTKATFEI 257
++ G S +AS S R +P++ PGV IL+ +P ++E
Sbjct: 276 VIAVGAIDSNDNIASFSNR----------QPEVSAPGVDILSTYPDD---------SYET 316
Query: 258 ADGTSMSCPHLSGIAALLKSTH 279
GT+M+ PH+SG+ AL+++ +
Sbjct: 317 LMGTAMATPHVSGVVALIQAAY 338
>pdb|2E1P|A Chain A, Crystal Structure Of Pro-Tk-Subtilisin
Length = 398
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 19/82 (23%)
Query: 198 LLRTGNKKSAPEVASLSARGPNKVSPGILKPDIIGPGVSILAAWPSSQENITKTKATFEI 257
++ G S +AS S R +P++ PGV IL+ +P ++E
Sbjct: 279 VIAVGAIDSNDNIASFSNR----------QPEVSAPGVDILSTYPDD---------SYET 319
Query: 258 ADGTSMSCPHLSGIAALLKSTH 279
GT+M+ PH+SG+ AL+++ +
Sbjct: 320 LMGTAMATPHVSGVVALIQAAY 341
>pdb|1PEK|E Chain E, Structure Of The Complex Of Proteinase K With A
Substrate-analogue Hexa-peptide Inhibitor At 2.2
Angstroms Resolution
pdb|1HT3|A Chain A, Mercury Induced Modifications In The Stereochemistry Of
The Active Site Through Cys-73 In A Serine Protease:
Crystal Structure Of The Complex Of A Partially Modified
Proteinase K With Mercury At 1.8 A Resolution
pdb|1PFG|A Chain A, Strategy To Design Inhibitors: Structure Of A Complex Of
Proteinase K With A Designed Octapeptide Inhibitor
N-Ac-Pro-Ala-Pro-Phe-Dala-Ala- Ala-Ala-Nh2 At 2.5a
Resolution
Length = 279
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 13/85 (15%)
Query: 229 DIIGPGVSILAAW-PSSQENITKTKATFEIADGTSMSCPHLSGIAALLKSTHPDWSPAAI 287
DI GPG SIL+ W S +I+ GTSM+ PH++G+AA L + + +A
Sbjct: 200 DIFGPGTSILSTWIGGSTRSIS----------GTSMATPHVAGLAAYLMTLGKTTAASAC 249
Query: 288 KSAIMTTADIVNLEGKPIINNYNLL 312
+ I TA+ +L P NLL
Sbjct: 250 R-YIADTANKGDLSNIP-FGTVNLL 272
>pdb|2ZWP|A Chain A, Crystal Structure Of Ca3 Site Mutant Of Pro-S324a
pdb|2ZWP|B Chain B, Crystal Structure Of Ca3 Site Mutant Of Pro-S324a
Length = 398
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 19/82 (23%)
Query: 198 LLRTGNKKSAPEVASLSARGPNKVSPGILKPDIIGPGVSILAAWPSSQENITKTKATFEI 257
++ G S +AS S R +P++ PGV IL+ +P ++E
Sbjct: 279 VIAVGAIDSNDNIASFSNR----------QPEVSAPGVDILSTYPDD---------SYET 319
Query: 258 ADGTSMSCPHLSGIAALLKSTH 279
GT+M+ PH+SG+ AL+++ +
Sbjct: 320 LMGTAMATPHVSGVVALIQAAY 341
>pdb|2ZWO|A Chain A, Crystal Structure Of Ca2 Site Mutant Of Pro-S324a
pdb|2ZWO|B Chain B, Crystal Structure Of Ca2 Site Mutant Of Pro-S324a
pdb|2ZWO|C Chain C, Crystal Structure Of Ca2 Site Mutant Of Pro-S324a
Length = 398
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 19/82 (23%)
Query: 198 LLRTGNKKSAPEVASLSARGPNKVSPGILKPDIIGPGVSILAAWPSSQENITKTKATFEI 257
++ G S +AS S R +P++ PGV IL+ +P ++E
Sbjct: 279 VIAVGAIDSNDNIASFSNR----------QPEVSAPGVDILSTYPDD---------SYET 319
Query: 258 ADGTSMSCPHLSGIAALLKSTH 279
GT+M+ PH+SG+ AL+++ +
Sbjct: 320 LMGTAMATPHVSGVVALIQAAY 341
>pdb|3PRK|E Chain E, Inhibition Of Proteinase K By
Methoxysuccinyl-Ala-Ala-Pro-Ala- Chloromethyl Ketone. An
X-Ray Study At 2.2-Angstroms Resolution
pdb|1BJR|E Chain E, Complex Formed Between Proteolytically Generated
Lactoferrin Fragment And Proteinase K
pdb|1CNM|A Chain A, Enhancement Of Catalytic Efficiency Of Proteinase K
Through Exposure To Anhydrous Organic Solvent At 70
Degrees Celsius
pdb|1EGQ|A Chain A, Enhancement Of Enzyme Activity Through Three-Phase
Partitioning: Crystal Structure Of A Modified Serine
Proteinase At 1.5 A Resolution
pdb|1OYO|A Chain A, Regulation Of Protease Activity By Melanin: Crystal
Structure Of The Complex Formed Between Proteinase K And
Melanin Monomers At 2.0 Resolution
pdb|1PJ8|A Chain A, Structure Of A Ternary Complex Of Proteinase K, Mercury
And A Substrate-Analogue Hexapeptide At 2.2 A Resolution
pdb|2DP4|E Chain E, Crystal Structure Of The Complex Formed Between Proteinase
K And A Human Lactoferrin Fragment At 2.9 A Resolution
pdb|1PTK|A Chain A, Studies On The Inhibitory Action Of Mercury Upon
Proteinase K
pdb|2PKC|A Chain A, Crystal Structure Of Calcium-Free Proteinase K At 1.5
Angstroms Resolution
pdb|2PRK|A Chain A, Synchrotron X-Ray Data Collection And Restrained Least-
Squares Refinement Of The Crystal Structure Of
Proteinase K At 1.5 Angstroms Resolution
pdb|3D9Q|X Chain X, Proteinase K By Lb Nanotemplate Method Before High X-Ray
Dose On Esrf Id23-1 Beamline
pdb|3DDZ|X Chain X, Proteinase K By Lb Nanotemplate Method After The First
Step Of High X-Ray Dose On Esrf Id23-1 Beamline
pdb|3DE0|X Chain X, Proteinase K By Lb Nanotemplate Method After The Second
Step Of High X-Ray Dose On Esrf Id23-1 Beamline
pdb|3DE1|X Chain X, Proteinase K By Lb Nanotemplate Method After The Third
Step Of High X-Ray Dose On Esrf Id23-1 Beamline
pdb|3DE2|X Chain X, Proteinase K By Lb Nanotemplate Method After The Fourth
Step Of High X-Ray Dose On Esrf Id23-1 Beamline
pdb|3DE3|X Chain X, Proteinase K By Classical Hanging Drop Method Before High
X- Ray Dose On Esrf Id23-1 Beamline
pdb|3DE4|X Chain X, Proteinase K By Classical Hanging Drop Method After The
First Step Of High X-Ray Dose On Esrf Id23-1 Beamline
pdb|3DE5|X Chain X, Roteinase K By Classical Hanging Drop Method After The
Second Step Of High X-Ray Dose On Esrf Id23-1 Beamline
pdb|3DE6|X Chain X, Proteinase K By Classical Hanging Drop Method After The
Third Step Of High X-Ray Dose On Esrf Id23-1 Beamline
pdb|3DE7|X Chain X, Proteinase K By Classical Hanging Drop Method After The
Fourth Step Of High X-Ray Dose On Esrf Id23-1 Beamline
pdb|3DVQ|X Chain X, Proteinase K By Lb Nanotemplate Method Before High X-Ray
Dose On Esrf Id14-2 Beamline
pdb|3DVR|X Chain X, Proteinase K By Lb Nanotemplate Method After The First
Step Of High X-Ray Dose On Esrf Id14-2 Beamline
pdb|3DVS|X Chain X, Proteinase K By Lb Nanotmplate Method After The Second
Step Of High Dose On Esrf Id14-2 Beamline
pdb|3DW1|X Chain X, Proteinase K By Lb Nanotemplate Method After The Third
Step High X-Ray Dose On Esrf Id14-2 Beamline
pdb|3DW3|X Chain X, Proteinase K By Classical Hanging Drop Method Before High
X Ray Dose On Esrf Id 14-2 Beamline
pdb|3DWE|X Chain X, Proteinase K By Classical Hanging Drop Method After High
X- Ray Dose On Esrf Id14-2 Beamline
pdb|3I2Y|X Chain X, Proteinase K By Classical Hanging Drop Method Before High
X- On Id14-2 Beamline At Esrf
pdb|3I30|X Chain X, Proteinase K By Classical Hanging Drop Method After High
X-R Id14-2 Beamline At Esrf
pdb|3I37|X Chain X, Proteinase K By Lb Nanotemplate Method Before High X-Ray
Dos 2 Beamline At Esrf
pdb|3I34|X Chain X, Proteinase K By Lb Nanotemplate Method After High X-Ray
Dose On Id14-2 Beamline At Esrf
pdb|3PTL|A Chain A, Crystal Structure Of Proteinase K Inhibited By A
Lactoferrin Nonapeptide,
Lys-Gly-Glu-Ala-Asp-Ala-Leu-Ser-Leu-Asp At 1.3 A
Resolution.
pdb|4DJ5|X Chain X, Proteinase K By Langmuir-Blodgett Hanging Drop Method At
1.8a Resolution For Unique Water Distribution
Length = 279
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 13/85 (15%)
Query: 229 DIIGPGVSILAAW-PSSQENITKTKATFEIADGTSMSCPHLSGIAALLKSTHPDWSPAAI 287
DI GPG SIL+ W S +I+ GTSM+ PH++G+AA L + + +A
Sbjct: 200 DIFGPGTSILSTWIGGSTRSIS----------GTSMATPHVAGLAAYLMTLGKTTAASAC 249
Query: 288 KSAIMTTADIVNLEGKPIINNYNLL 312
+ I TA+ +L P NLL
Sbjct: 250 R-YIADTANKGDLSNIP-FGTVNLL 272
>pdb|2ZRQ|A Chain A, Crystal Structure Of S324a-Subtilisin
pdb|3A3N|A Chain A, Crystal Structure Of Complex Between Sa-Subtilisin And Tk-
Propeptide With Deletion Of The Two C-Terminal Residues
pdb|3A3O|A Chain A, Crystal Structure Of Complex Between Sa-Subtilisin And Tk-
Propeptide With Deletion Of The Five C-Terminal Residues
Length = 329
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 19/82 (23%)
Query: 198 LLRTGNKKSAPEVASLSARGPNKVSPGILKPDIIGPGVSILAAWPSSQENITKTKATFEI 257
++ G S +AS S R +P++ PGV IL+ +P ++E
Sbjct: 210 VIAVGAIDSNDNIASFSNR----------QPEVSAPGVDILSTYPDD---------SYET 250
Query: 258 ADGTSMSCPHLSGIAALLKSTH 279
GT+M+ PH+SG+ AL+++ +
Sbjct: 251 LMGTAMATPHVSGVVALIQAAY 272
>pdb|3A3P|A Chain A, Crystal Structure Of Complex Between E201aSA-Subtilisin
And Tk-Propeptide
Length = 329
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 19/82 (23%)
Query: 198 LLRTGNKKSAPEVASLSARGPNKVSPGILKPDIIGPGVSILAAWPSSQENITKTKATFEI 257
++ G S +AS S R +P++ PGV IL+ +P ++E
Sbjct: 210 VIAVGAIDSNDNIASFSNR----------QPEVSAPGVDILSTYPDD---------SYET 250
Query: 258 ADGTSMSCPHLSGIAALLKSTH 279
GT+M+ PH+SG+ AL+++ +
Sbjct: 251 LMGTAMATPHVSGVVALIQAAY 272
>pdb|2Z2X|A Chain A, Crystal Structure Of Mature Form Of Tk-Subtilisin
Length = 318
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 19/82 (23%)
Query: 198 LLRTGNKKSAPEVASLSARGPNKVSPGILKPDIIGPGVSILAAWPSSQENITKTKATFEI 257
++ G S +AS S R +P++ PGV IL+ +P ++E
Sbjct: 199 VIAVGAIDSNDNIASFSNR----------QPEVSAPGVDILSTYPDD---------SYET 239
Query: 258 ADGTSMSCPHLSGIAALLKSTH 279
GT M+ PH+SG+ AL+++ +
Sbjct: 240 LMGTXMATPHVSGVVALIQAAY 261
>pdb|2Z2Y|A Chain A, Crystal Structure Of Autoprocessed Form Of Tk-Subtilisin
pdb|2Z2Y|C Chain C, Crystal Structure Of Autoprocessed Form Of Tk-Subtilisin
Length = 318
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 19/82 (23%)
Query: 198 LLRTGNKKSAPEVASLSARGPNKVSPGILKPDIIGPGVSILAAWPSSQENITKTKATFEI 257
++ G S +AS S R +P++ PGV IL+ +P ++E
Sbjct: 199 VIAVGAIDSNDNIASFSNR----------QPEVSAPGVDILSTYPDD---------SYET 239
Query: 258 ADGTSMSCPHLSGIAALLKSTH 279
GT M+ PH+SG+ AL+++ +
Sbjct: 240 LMGTCMATPHVSGVVALIQAAY 261
>pdb|2IXT|A Chain A, Sphericase
pdb|2IXT|B Chain B, Sphericase
pdb|3D43|A Chain A, The Crystal Structure Of Sph At 0.8a
pdb|3D43|B Chain B, The Crystal Structure Of Sph At 0.8a
Length = 310
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 9/74 (12%)
Query: 229 DIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALLKSTHPDWSPAAIK 288
+I PG S+ + W + N GTSM+ PH+SG+AA + + +P S ++
Sbjct: 226 EISAPGSSVYSTWYNGGYNTIS---------GTSMATPHVSGLAAKIWAENPSLSNTQLR 276
Query: 289 SAIMTTADIVNLEG 302
S + A V+++G
Sbjct: 277 SNLQERAKSVDIKG 290
>pdb|4AKT|A Chain A, Patg Macrocyclase In Complex With Peptide
pdb|4AKT|B Chain B, Patg Macrocyclase In Complex With Peptide
Length = 360
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 12/73 (16%)
Query: 227 KPDIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALLKSTHPDWSP-- 284
K I+ PG IL A P ++E + T GTSM+ P ++GI+ALL S
Sbjct: 265 KEGILAPGEEILGAQPCTEEPVRLT--------GTSMAAPVMTGISALLMSLQVQQGKPV 316
Query: 285 --AAIKSAIMTTA 295
A+++A++ TA
Sbjct: 317 DAEAVRTALLKTA 329
>pdb|4AKS|A Chain A, Patg Macrocyclase Domain
pdb|4AKS|B Chain B, Patg Macrocyclase Domain
Length = 360
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 12/73 (16%)
Query: 227 KPDIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALLKSTHPDWSP-- 284
K I+ PG IL A P ++E + T GTSM+ P ++GI+ALL S
Sbjct: 265 KEGILAPGEEILGAQPCTEEPVRLT--------GTSMAAPVMTGISALLMSLQVQQGKPV 316
Query: 285 --AAIKSAIMTTA 295
A+++A++ TA
Sbjct: 317 DAEAVRTALLKTA 329
>pdb|4H6X|A Chain A, Structure Of Patellamide Maturation Protease Patg
pdb|4H6X|B Chain B, Structure Of Patellamide Maturation Protease Patg
Length = 357
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 12/73 (16%)
Query: 227 KPDIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALLKSTHPDWSP-- 284
K I+ PG IL A P ++E + T GTSM+ P ++GI+ALL S
Sbjct: 247 KEGILAPGEEILGAQPCTEEPVRLT--------GTSMAAPVMTGISALLMSLQVQQGKPV 298
Query: 285 --AAIKSAIMTTA 295
A+++A++ TA
Sbjct: 299 DAEAVRTALLKTA 311
>pdb|1IC6|A Chain A, Structure Of A Serine Protease Proteinase K From
Tritirachium Album Limber At 0.98 A Resolution
pdb|1P7V|A Chain A, Structure Of A Complex Formed Between Proteinase K And A
Designed Heptapeptide Inhibitor Pro-Ala-Pro-Phe-Ala-Ala-
Ala At Atomic Resolution
pdb|1P7W|A Chain A, Crystal Structure Of The Complex Of Proteinase K With A
Designed Heptapeptide Inhibitor
Pro-Ala-Pro-Phe-Ala-Ser-Ala At Atomic Resolution
pdb|2HD4|A Chain A, Crystal Structure Of Proteinase K Inhibited By A
Lactoferrin Octapeptide Gly-Asp-Glu-Gln-Gly-Glu-Asn-Lys
At 2.15 A Resolution
pdb|2DQK|A Chain A, Crystal Structure Of The Complex Of Proteinase K With A
Specific Lactoferrin Peptide Val-Leu-Leu-His At 1.93 A
Resolution
pdb|2HPZ|A Chain A, Crystal Structure Of Proteinase K Complex With A Synthetic
Peptide Klkllvvirlk At 1.69 A Resolution
pdb|2DUJ|A Chain A, Crystal Structure Of The Complex Formed Between Proteinase
K And A Synthetic Peptide Leu-Leu-Phe-Asn-Asp At 1.67 A
Resolution
pdb|2ID8|A Chain A, Crystal Structure Of Proteinase K
pdb|2G4V|A Chain A, Anomalous Substructure Of Proteinase K
pdb|2PQ2|A Chain A, Structure Of Serine Proteinase K Complex With A Highly
Flexible Hydrophobic Peptide At 1.8a Resolution
pdb|2PWA|A Chain A, Crystal Structure Of The Complex Of Proteinase K With
Alanine Boronic Acid At 0.83a Resolution
pdb|2PWB|A Chain A, Crystal Structure Of The Complex Of Proteinase K With
Coumarin At 1.9 A Resolution
pdb|2PYZ|A Chain A, Crystal Structure Of The Complex Of Proteinase K With
Auramine At 1.8a Resolution
pdb|2V8B|A Chain A, Sad Structure Solution Of Proteinase K Grown In Selenate
Solution
pdb|3DYB|A Chain A, Proteinase K- Digalacturonic Acid Complex
pdb|3GT3|A Chain A, Structure Of Proteinase K With The Mad Triangle B3c
pdb|3GT4|A Chain A, Structure Of Proteinase K With The Magic Triangle I3c
pdb|3OSZ|A Chain A, Crystal Structure Of The Complex Of Proteinase K With An
Antimicrobial Nonapeptide, At 2.26 A Resolution
pdb|3L1K|A Chain A, Sad Structure Solution Of Proteinase K Grown In Potassium
Tellurate Solution
pdb|3AJ8|A Chain A, X-Ray Analysis Of Crystal Of Proteinase K Obtained From
H2o Solution Using Peg 8000
pdb|3AJ9|A Chain A, X-Ray Analysis Of Crystal Of Proteinase K Obtained From
D2o Solution Using Peg 8000
pdb|3Q40|A Chain A, Sulphur Sad Structure Solution Of Proteinase K Grown In
So4-Less Solution.
pdb|3Q5G|A Chain A, Sulphur Sad Structure Solution Of Proteinase K Grown In
So4 Solution
pdb|3QMP|A Chain A, Selenium Sad Structure Solution Of Proteinase K Grown In
So4-Less Solution And Soaked In Selenate.
pdb|4B5L|A Chain A, The 1.6 A High Energy Room Temperature Structure Of
Proteinase K At 38.4 Kev And 0.04 Mgy
pdb|4FON|A Chain A, High Energy Remote Sad Structure Solution Of Proteinase K
From The 37.8 Kev Tellurium K Edge
Length = 279
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 13/85 (15%)
Query: 229 DIIGPGVSILAAW-PSSQENITKTKATFEIADGTSMSCPHLSGIAALLKSTHPDWSPAAI 287
DI GPG IL+ W S +I+ GTSM+ PH++G+AA L + + +A
Sbjct: 200 DIFGPGTDILSTWIGGSTRSIS----------GTSMATPHVAGLAAYLMTLGKTTAASAC 249
Query: 288 KSAIMTTADIVNLEGKPIINNYNLL 312
+ I TA+ +L P NLL
Sbjct: 250 R-YIADTANKGDLSNIP-FGTVNLL 272
>pdb|1WMF|A Chain A, Crystal Structure Of Alkaline Serine Protease Kp-43 From
Bacillus Sp. Ksm-kp43 (oxidized Form, 1.73 Angstrom)
Length = 434
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 209 EVASLSARGPNKVSPGILKPDIIGPGVSILAAWPSSQENIT---KTKATFEIADGTSMSC 265
VA S+RGP K G +KPD++ PG IL+A S + + + + GTS +
Sbjct: 201 HVAQFSSRGPTK--DGRIKPDVMAPGTFILSARSSLAPDSSFWANHDSKYAYXGGTSXAT 258
Query: 266 PHLSGIAALLK 276
P ++G A L+
Sbjct: 259 PIVAGNVAQLR 269
>pdb|3LPD|A Chain A, Crystal Structure Of A Subtilisin-Like Protease
Length = 339
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 229 DIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALL----KSTHPDWSP 284
D+ PG IL+ S +F GTSM+ PH+SG+AAL+ S + + +P
Sbjct: 245 DLAAPGQDILSTVDSGTRRPVSDAYSFMA--GTSMATPHVSGVAALVISAANSVNKNLTP 302
Query: 285 AAIKSAIMTT 294
A +K +++T
Sbjct: 303 AELKDVLVST 312
>pdb|3LPA|A Chain A, Crystal Structure Of A Subtilisin-Like Protease
Length = 340
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 229 DIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALL----KSTHPDWSP 284
D+ PG IL+ S +F GTSM+ PH+SG+AAL+ S + + +P
Sbjct: 245 DLAAPGQDILSTVDSGTRRPVSDAYSFMA--GTSMATPHVSGVAALVISAANSVNKNLTP 302
Query: 285 AAIKSAIMTT 294
A +K +++T
Sbjct: 303 AELKDVLVST 312
>pdb|3LPC|A Chain A, Crystal Structure Of A Subtilisin-Like Protease
Length = 340
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 229 DIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALL----KSTHPDWSP 284
D+ PG IL+ S +F GTSM+ PH+SG+AAL+ S + + +P
Sbjct: 245 DLAAPGQDILSTVDSGTRRPVSDAYSFMA--GTSMATPHVSGVAALVISAANSVNKNLTP 302
Query: 285 AAIKSAIMTT 294
A +K +++T
Sbjct: 303 AELKDVLVST 312
>pdb|1EA7|A Chain A, Sphericase
Length = 310
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Query: 229 DIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALLKSTHPDWSPAAIK 288
+I PG S+ + W + N GT M+ PH+SG+AA + + +P S ++
Sbjct: 226 EISAPGSSVYSTWYNGGYNTIS---------GTXMATPHVSGLAAKIWAENPSLSNTQLR 276
Query: 289 SAIMTTADIVNLEG 302
S + A V+++G
Sbjct: 277 SNLQERAKSVDIKG 290
>pdb|3F7M|A Chain A, Crystal Structure Of Apo Cuticle-Degrading Protease
(Ver112) From Verticillium Psalliotae
Length = 279
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 9/47 (19%)
Query: 229 DIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALL 275
DI PG SI + W + N GTSM+ PH++G+AA L
Sbjct: 201 DIFAPGTSITSTWIGGRTNTIS---------GTSMATPHIAGLAAYL 238
>pdb|3LXU|X Chain X, Crystal Structure Of Tripeptidyl Peptidase 2 (Tpp Ii)
Length = 1354
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Query: 251 TKATFEIADGTSMSCPHLSGIAAL----LKSTHPDWSPAAIKSAIMTTA 295
T + ++ +GTS + PH++G AL LK + ++SP +IK AI TA
Sbjct: 451 TXSKSQLXNGTSXAAPHVAGAVALLISGLKQQNIEYSPYSIKRAISVTA 499
>pdb|3HJR|A Chain A, Crystal Structure Of Serine Protease Of Aeromonas Sobria
Length = 600
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%)
Query: 257 IADGTSMSCPHLSGIAALLKSTHPDWSPAAIKSAIMTTADIVNLEGKPIINNY 309
+ +GTS + P SG ALL S +PD S ++ + +A V+ + +P++ +Y
Sbjct: 331 VMNGTSSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSY 383
>pdb|2GKO|A Chain A, S41 Psychrophilic Protease
Length = 309
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 209 EVASLSARGPNKVSPG--ILKPD--IIGPGVSILAAWPSSQENITKTKATFEIADGTSMS 264
VA S+RG + + I K D I PG ++ + W + GTSM+
Sbjct: 201 RVADFSSRGHKRTAGDYVIQKGDVEISAPGAAVYSTW---------FDGGYATISGTSMA 251
Query: 265 CPHLSGIAALLKSTHPDWSPAAIKSAIMTTADIVNL 300
PH +G+AA + + P S ++ + T A + ++
Sbjct: 252 SPHAAGLAAKIWAQSPAASNVDVRGELQTRASVNDI 287
>pdb|1XF1|A Chain A, Structure Of C5a Peptidase- A Key Virulence Factor From
Streptococcus
pdb|1XF1|B Chain B, Structure Of C5a Peptidase- A Key Virulence Factor From
Streptococcus
Length = 926
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 13/66 (19%)
Query: 224 GILKPDIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALLK----STH 279
G +KPDI PG IL++ +++ + GTS S P ++GI LL+ + +
Sbjct: 378 GNIKPDIAAPGQDILSSVANNK---------YAKLSGTSXSAPLVAGIXGLLQKQYETQY 428
Query: 280 PDWSPA 285
PD +P+
Sbjct: 429 PDXTPS 434
>pdb|3TI7|A Chain A, Crystal Structure Of The Basic Protease Bprv From The
Ovine Footrot Pathogen, Dichelobacter Nodosus
Length = 352
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 233 PGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALLKS 277
PG +IL+ Q ++++ + GTSM+ PH+SG+AAL+ S
Sbjct: 250 PGTNILSTIDVGQAG--PVRSSYGMKAGTSMAAPHVSGVAALVIS 292
>pdb|3TI9|A Chain A, Crystal Structure Of The Basic Protease Bprb From The
Ovine Footrot Pathogen, Dichelobacter Nodosus
Length = 352
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 233 PGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALLKS 277
PG +IL+ Q ++++ + GTSM+ PH+SG+AAL+ S
Sbjct: 250 PGTNILSTIDVGQAG--PVRSSYGMKAGTSMAAPHVSGVAALVIS 292
>pdb|1S2N|A Chain A, Crystal Strucure Of A Cold Adapted Subtilisin-Like Serine
Proteinase
pdb|1S2N|B Chain B, Crystal Strucure Of A Cold Adapted Subtilisin-Like Serine
Proteinase
pdb|1SH7|A Chain A, Crystal Structure Of A Cold Adapted Subtilisin-Like Serine
Proteinase
pdb|1SH7|B Chain B, Crystal Structure Of A Cold Adapted Subtilisin-Like Serine
Proteinase
Length = 284
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 9/67 (13%)
Query: 229 DIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALLKSTHPDWSPAAIK 288
D+ PG I +AW ++ GTSM+ PH++G+AAL + +P +
Sbjct: 196 DLFAPGSQIKSAW---------YDGGYKTISGTSMATPHVAGVAALYLQENNGLTPLQLT 246
Query: 289 SAIMTTA 295
+ + A
Sbjct: 247 GLLNSRA 253
>pdb|4ESW|A Chain A, Crystal Structure Of C. Albicans Thi5 H66g Mutant
pdb|4ESW|B Chain B, Crystal Structure Of C. Albicans Thi5 H66g Mutant
Length = 342
Score = 32.0 bits (71), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Query: 297 IVNLEGKPIINNYNLLPAELFAVGAGHVNPSKANDPGLIYDIQPDDYVPYLCGLNYTDQQ 356
I LEG I +++ L + G + ++ Y + PDDYV CG+N
Sbjct: 94 ICYLEGSGITSDFQSLKGKRIGY-VGEFGKIQVDELTKHYGMTPDDYVAVRCGMNVAKYI 152
Query: 357 LQTIVDH--DVQCSKVASIAEA 376
L+ +D ++C + + EA
Sbjct: 153 LEGTIDCGIGIECIQQVELEEA 174
>pdb|3F7O|A Chain A, Crystal Structure Of Cuticle-degrading Protease From
Paecilomyces Lilacinus (pl646)
pdb|3F7O|B Chain B, Crystal Structure Of Cuticle-degrading Protease From
Paecilomyces Lilacinus (pl646)
Length = 284
Score = 32.0 bits (71), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 9/47 (19%)
Query: 229 DIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALL 275
DI PG +IL+ W N GTSM+ PH+ G+ A L
Sbjct: 203 DIFAPGSNILSTWIGGTTNTI---------SGTSMATPHIVGLGAYL 240
>pdb|4ESX|A Chain A, Crystal Structure Of C. Albicans Thi5 Complexed With Plp
pdb|4ESX|B Chain B, Crystal Structure Of C. Albicans Thi5 Complexed With Plp
Length = 342
Score = 32.0 bits (71), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Query: 297 IVNLEGKPIINNYNLLPAELFAVGAGHVNPSKANDPGLIYDIQPDDYVPYLCGLNYTDQQ 356
I LEG I +++ L + G + ++ Y + PDDYV CG+N
Sbjct: 94 ICYLEGSGITSDFQSLKGKRIGY-VGEFGKIQVDELTKHYGMTPDDYVAVRCGMNVAKYI 152
Query: 357 LQTIVDH--DVQCSKVASIAEA 376
L+ +D ++C + + EA
Sbjct: 153 LEGTIDCGIGIECIQQVELEEA 174
>pdb|4H6W|A Chain A, Structure Of Prenylagaramide Maturation Protease Paga
pdb|4H6W|B Chain B, Structure Of Prenylagaramide Maturation Protease Paga
Length = 306
Score = 31.6 bits (70), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 17/79 (21%)
Query: 227 KPDIIGPGVSILAAWPSSQENITKTKATFEIADGTSMSCPHLSGIAALL------KSTHP 280
K I+ PG IL A P+ T ++ GTS + P +SG+AALL + P
Sbjct: 198 KQGILAPGKDILGAKPNG--------GTIRLS-GTSFATPIVSGVAALLLSLQIKRGEKP 248
Query: 281 DWSPAAIKSAIMTTADIVN 299
D P +K+A++ +A N
Sbjct: 249 D--PQKVKNALLASATPCN 265
>pdb|1B2W|L Chain L, Comparison Of The Three-Dimensional Structures Of A
Humanized And A Chimeric Fab Of An Anti-Gamma-Interferon
Antibody
pdb|1T04|A Chain A, Three Dimensional Structure Of A Humanized Anti-Ifn-Gamma
Fab In C2 Space Group
pdb|1T04|C Chain C, Three Dimensional Structure Of A Humanized Anti-Ifn-Gamma
Fab In C2 Space Group
pdb|1T3F|A Chain A, Three Dimensional Structure Of A Humanized Anti-Ifn-Gamma
Fab (Huzaf) In P21 21 21 Space Group
Length = 214
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 8/47 (17%)
Query: 307 NNYNLLPAELFAVGAGHVNPSKANDPGL-IYDIQPDDYVPYLCGLNY 352
N Y +P+ G+G D L I +QPDD+ Y CG +Y
Sbjct: 53 NRYTGVPSRFSGSGSG-------TDFTLTISSLQPDDFATYYCGQSY 92
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.314 0.130 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,267,600
Number of Sequences: 62578
Number of extensions: 580407
Number of successful extensions: 1207
Number of sequences better than 100.0: 115
Number of HSP's better than 100.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 995
Number of HSP's gapped (non-prelim): 186
length of query: 475
length of database: 14,973,337
effective HSP length: 102
effective length of query: 373
effective length of database: 8,590,381
effective search space: 3204212113
effective search space used: 3204212113
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 53 (25.0 bits)