BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047897
(232 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224143306|ref|XP_002324910.1| predicted protein [Populus trichocarpa]
gi|222866344|gb|EEF03475.1| predicted protein [Populus trichocarpa]
Length = 386
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/229 (82%), Positives = 206/229 (89%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+F +KSKGQH+LTNQR+LDSIVRKSSINP DTVLEIGPGTGNLTLKLL+V+ KV A+EID
Sbjct: 54 LFLYKSKGQHLLTNQRILDSIVRKSSINPTDTVLEIGPGTGNLTLKLLDVASKVVAVEID 113
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
+RMV +LN+R + GF D+L+VI +DALK EFP+FDLVVANIPYGISSPLVAKLVYG
Sbjct: 114 KRMVGVLNKRVKEHGFEDKLSVIREDALKAEFPKFDLVVANIPYGISSPLVAKLVYGANP 173
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FRSATLLLQKEFARRLLA PGDSEFNRLAVNVKLVADVEFVM+VSKRDF P PKVDSSVV
Sbjct: 174 FRSATLLLQKEFARRLLAKPGDSEFNRLAVNVKLVADVEFVMNVSKRDFFPVPKVDSSVV 233
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLSK 230
IIRPK IPDVNLDEW AFT+ CF KKNKTLGATFKQKKKVIEL RLSK
Sbjct: 234 IIRPKDRIPDVNLDEWWAFTKNCFGKKNKTLGATFKQKKKVIELFRLSK 282
>gi|449491400|ref|XP_004158885.1| PREDICTED: probable dimethyladenosine transferase-like [Cucumis
sativus]
Length = 352
Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/227 (79%), Positives = 206/227 (90%)
Query: 1 YIFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEI 60
+++F+KS+GQHILTNQR+LDSIVRKS+I P DTVLEIGPGTGNLTLKLLE S+KV A+EI
Sbjct: 53 HLYFYKSRGQHILTNQRILDSIVRKSAILPTDTVLEIGPGTGNLTLKLLEASQKVIAVEI 112
Query: 61 DERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTK 120
D+RMVE+L++R A+ DR+ VI +DALK EFP FDLVVANIPYGISSPLVAKLVYGT
Sbjct: 113 DKRMVEVLHKRVAEHQLEDRICVICQDALKCEFPHFDLVVANIPYGISSPLVAKLVYGTI 172
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
FRSATLLLQKEFARRLLA PGDSE+NRLAVNVKLVADVE VMDVSKRDF+PCPKVDSSV
Sbjct: 173 PFRSATLLLQKEFARRLLADPGDSEYNRLAVNVKLVADVEHVMDVSKRDFVPCPKVDSSV 232
Query: 181 VIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLR 227
V+IRPK E+P VNL+EWRAFTRTCF KKNKTLGATFKQK+K+++L+
Sbjct: 233 VLIRPKKEVPKVNLEEWRAFTRTCFGKKNKTLGATFKQKRKLMDLMH 279
>gi|449464528|ref|XP_004149981.1| PREDICTED: probable dimethyladenosine transferase-like [Cucumis
sativus]
Length = 352
Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/227 (78%), Positives = 206/227 (90%)
Query: 1 YIFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEI 60
+++F+KS+GQHILTNQR+LDSIVRKS+I P DTVLEIGPGTGNLTLKLLE S+KV A+EI
Sbjct: 53 HLYFYKSRGQHILTNQRILDSIVRKSAILPTDTVLEIGPGTGNLTLKLLEASQKVIAVEI 112
Query: 61 DERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTK 120
D+RMVE+L++R + DR+ VI +DALK EFP FDLVVANIPYGISSPLVAKLVYGT
Sbjct: 113 DKRMVEVLHKRVVEHQLEDRICVICQDALKCEFPHFDLVVANIPYGISSPLVAKLVYGTI 172
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
FRSATLLLQKEFARRLLA PGDSE+NRLAVNVKLVADVE VMDVSKRDF+PCPKVDSSV
Sbjct: 173 PFRSATLLLQKEFARRLLADPGDSEYNRLAVNVKLVADVEHVMDVSKRDFVPCPKVDSSV 232
Query: 181 VIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLR 227
V+IRPK E+P+VNL+EWRAFTRTCF KKNKTLGATFKQK+K+++L+
Sbjct: 233 VLIRPKKEVPEVNLEEWRAFTRTCFGKKNKTLGATFKQKRKLMDLMH 279
>gi|297735070|emb|CBI17432.3| unnamed protein product [Vitis vinifera]
Length = 383
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/229 (79%), Positives = 207/229 (90%)
Query: 1 YIFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEI 60
++F +KS GQHILTN RVLD+IVRKS+I P DTVLEIGPGTGNLTL+LL+ +++V A+E+
Sbjct: 45 HMFLYKSWGQHILTNPRVLDTIVRKSNIKPTDTVLEIGPGTGNLTLRLLQAAQRVVAVEL 104
Query: 61 DERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTK 120
D RMVEIL +R A+ G D+L VI KDALKT+FPQFDLVVANIPYGISSPLVAKLV+G
Sbjct: 105 DARMVEILRKRVAEHGLEDQLTVICKDALKTDFPQFDLVVANIPYGISSPLVAKLVFGAN 164
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
FRSATLLLQKEFARRLLA+PGDSEFNRLAVNVKLVA+VEFVMDVSKRDFLPCPKVDSSV
Sbjct: 165 PFRSATLLLQKEFARRLLANPGDSEFNRLAVNVKLVAEVEFVMDVSKRDFLPCPKVDSSV 224
Query: 181 VIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLS 229
V IRPKAE+PDV+L+EW AFTRTCFSKKNKTLGATFK K++V+EL RLS
Sbjct: 225 VTIRPKAEVPDVDLNEWCAFTRTCFSKKNKTLGATFKHKRRVMELWRLS 273
>gi|147794654|emb|CAN73506.1| hypothetical protein VITISV_007907 [Vitis vinifera]
Length = 383
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/228 (79%), Positives = 205/228 (89%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+F +KS GQHILTN RVLD+IVRKS+I P DTVLEIGPGTGNLTL+LL+ +++V A+ +D
Sbjct: 46 MFLYKSWGQHILTNPRVLDTIVRKSNIKPTDTVLEIGPGTGNLTLRLLQAAQRVVAVXLD 105
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMVEIL +R A+ G D+L VI KDALKT+FPQFDLVVANIPYGISSPLVAKLV+G
Sbjct: 106 ARMVEILRKRVAEHGLEDQLTVICKDALKTDFPQFDLVVANIPYGISSPLVAKLVFGANP 165
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FRSATLLLQKEFARRLLA+PGDSEFNRLAVNVKLVA+VEFVMDVSKRDFLPCPKVDSSVV
Sbjct: 166 FRSATLLLQKEFARRLLANPGDSEFNRLAVNVKLVAEVEFVMDVSKRDFLPCPKVDSSVV 225
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLS 229
IRPKAEIPDV+L+EW AFTRTCFSKKNKTLGATFK K++V+EL RLS
Sbjct: 226 TIRPKAEIPDVDLNEWCAFTRTCFSKKNKTLGATFKHKRRVMELWRLS 273
>gi|255560978|ref|XP_002521501.1| dimethyladenosine transferase, putative [Ricinus communis]
gi|223539179|gb|EEF40772.1| dimethyladenosine transferase, putative [Ricinus communis]
Length = 366
Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/227 (77%), Positives = 200/227 (88%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ +KSKGQH+LTN RVLD+IVR+S++ P DTVLEIGPGTGNLTL+LLEV++KV A+EID
Sbjct: 51 LHLYKSKGQHLLTNPRVLDTIVRRSAVEPTDTVLEIGPGTGNLTLRLLEVARKVVAVEID 110
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
+RMVEIL RA++ G D+L++I KDALK EFP F++VVANIPYGISSPLV KLVYG
Sbjct: 111 KRMVEILRERASEQGLQDKLDIIHKDALKAEFPNFNIVVANIPYGISSPLVTKLVYGVNK 170
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FRS TLLLQKEFARRLLA+PGD E+NRLAVNVKLVADVEFVMDVSKRDF+P PKVDSSVV
Sbjct: 171 FRSLTLLLQKEFARRLLANPGDPEYNRLAVNVKLVADVEFVMDVSKRDFVPSPKVDSSVV 230
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRL 228
IIRPK EIP VNL EWRAFTRTCF KNKTLGA FKQKKKV+ELLR+
Sbjct: 231 IIRPKTEIPSVNLVEWRAFTRTCFGNKNKTLGAIFKQKKKVMELLRM 277
>gi|357483617|ref|XP_003612095.1| Dimethyladenosine transferase-like protein [Medicago truncatula]
gi|355513430|gb|AES95053.1| Dimethyladenosine transferase-like protein [Medicago truncatula]
Length = 332
Score = 367 bits (941), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 178/228 (78%), Positives = 201/228 (88%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I+F+KS+GQHILTN RVLD+IV+KS+INP DTVLEIGPGTGNLTLKLLE S++V AIEID
Sbjct: 30 IYFYKSRGQHILTNPRVLDTIVQKSAINPSDTVLEIGPGTGNLTLKLLEASREVVAIEID 89
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
+RMV IL RA G ++L VISKDAL+TEFP FDLVVANIPYGISSPL+ KL+Y T
Sbjct: 90 QRMVNILENRALKRGLRNKLTVISKDALRTEFPPFDLVVANIPYGISSPLIIKLIYETTP 149
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FRSATLLLQKEFARRLLA+PGDSEFNRLAVN+KL+ADVEFVMDVSKRDFLP PKVDSSVV
Sbjct: 150 FRSATLLLQKEFARRLLANPGDSEFNRLAVNIKLLADVEFVMDVSKRDFLPSPKVDSSVV 209
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLS 229
IIRPK +P VNL +WRAFTRTCF+ KNKTLGATFK K+KV+ELL +
Sbjct: 210 IIRPKVNVPAVNLHQWRAFTRTCFNNKNKTLGATFKNKRKVLELLEFN 257
>gi|78499686|gb|ABB45840.1| hypothetical protein [Eutrema halophilum]
Length = 310
Score = 358 bits (920), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 171/228 (75%), Positives = 198/228 (86%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+F HKSKGQH+LTN R+LD+IVR S + P DTVLEIGPGTGNLT+KLLE ++ V A+EID
Sbjct: 45 LFLHKSKGQHLLTNNRILDAIVRISDVRPTDTVLEIGPGTGNLTMKLLEAAQNVVAVEID 104
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
+RMVEIL +R AD G D+L +I KD LKT+FPQFDLVVANIPY ISSPLVAKLVYG+ +
Sbjct: 105 KRMVEILGKRVADHGLEDKLTIIQKDVLKTDFPQFDLVVANIPYNISSPLVAKLVYGSNA 164
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FRSATLLLQKEF+RRLLA+PGDS+FNRLAVNVKLVADV+FVMDVSKR+F+P PKVDSS+V
Sbjct: 165 FRSATLLLQKEFSRRLLANPGDSDFNRLAVNVKLVADVQFVMDVSKREFVPPPKVDSSLV 224
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLS 229
IIRPK PDV++ EW AFTRTCF KNKTLG+ F+QKKKVIELL S
Sbjct: 225 IIRPKEVKPDVDVQEWLAFTRTCFGNKNKTLGSMFRQKKKVIELLNFS 272
>gi|297797749|ref|XP_002866759.1| ribosomal RNA adenine dimethylase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297312594|gb|EFH43018.1| ribosomal RNA adenine dimethylase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 376
Score = 352 bits (903), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 170/228 (74%), Positives = 199/228 (87%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+F KSKGQH+LTN R+LD+IVR S + P DTVLEIGPGTGNLT+KLLE ++ V A+E+D
Sbjct: 54 LFLCKSKGQHLLTNTRILDAIVRCSDVRPTDTVLEIGPGTGNLTMKLLEAAQDVVAVELD 113
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
+RMVEIL +R +D GF +L +I KD LKT+FPQFDLVVANIPY ISSPLVAKLVYG+ +
Sbjct: 114 KRMVEILRKRVSDHGFAHKLTIIQKDVLKTDFPQFDLVVANIPYNISSPLVAKLVYGSNT 173
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FRSATLLLQKEF+RRLLA+PGDS+FNRLAVNVKLVADV+FVMDVSKR+F+P PKVDSSVV
Sbjct: 174 FRSATLLLQKEFSRRLLANPGDSDFNRLAVNVKLVADVKFVMDVSKREFVPPPKVDSSVV 233
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLS 229
+I PK IPDVN+ EW AFTRTCF KKNKTLG+ F+QKKKV+ELL LS
Sbjct: 234 MITPKEIIPDVNVQEWLAFTRTCFGKKNKTLGSMFRQKKKVMELLSLS 281
>gi|42573814|ref|NP_975003.1| Ribosomal RNA adenine dimethylase family protein [Arabidopsis
thaliana]
gi|10177517|dbj|BAB10912.1| dimethyladenosine transferase-like protein [Arabidopsis thaliana]
gi|332010821|gb|AED98204.1| Ribosomal RNA adenine dimethylase family protein [Arabidopsis
thaliana]
Length = 380
Score = 352 bits (902), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 170/228 (74%), Positives = 197/228 (86%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+F KSKGQH+LTN R+LDSIVR S I P DTVLEIGPGTGNLT+KLLE ++ V A+E+D
Sbjct: 61 LFLCKSKGQHLLTNTRILDSIVRSSDIRPTDTVLEIGPGTGNLTMKLLEAAQNVVAVELD 120
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
+RMVEIL +R +D GF D+L +I KD LKT+FP FDLVVANIPY ISSPLVAKLVYG+ +
Sbjct: 121 KRMVEILRKRVSDHGFADKLTIIQKDVLKTDFPHFDLVVANIPYNISSPLVAKLVYGSNT 180
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FRSATLLLQKEF+RRLLA+PGDS+FNRLAVNVKLVADV+FVMDVSKR+F+P PKVDSSV+
Sbjct: 181 FRSATLLLQKEFSRRLLANPGDSDFNRLAVNVKLVADVKFVMDVSKREFVPPPKVDSSVI 240
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLS 229
I PK IPDVN+ EW AFTRTCF KKNKTLG+ F+QKKKV+EL LS
Sbjct: 241 RITPKEIIPDVNVQEWLAFTRTCFGKKNKTLGSMFRQKKKVMELQSLS 288
>gi|356538250|ref|XP_003537617.1| PREDICTED: probable dimethyladenosine transferase-like [Glycine
max]
Length = 341
Score = 335 bits (859), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 168/228 (73%), Positives = 190/228 (83%), Gaps = 2/228 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
FHKS+GQHIL N R+LD+IVR+S+INP DTVLEIGPGTGNLTLKLLE + KV AIEID R
Sbjct: 34 FHKSRGQHILINPRILDTIVRRSAINPTDTVLEIGPGTGNLTLKLLEAAHKVVAIEIDHR 93
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
MV++L +R G D+L VI +DA++ FP+FDLVVANIPY ISSPLV KLVYG FR
Sbjct: 94 MVQVLEKRVLQRGLKDKLRVIERDAMRAPFPRFDLVVANIPYRISSPLVIKLVYGATPFR 153
Query: 124 SATLLLQKEFARRLLASPGDS-EFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
SATLLLQKEFARRLLA PGDS FNRL+ NVKLVADVE VMDVSKRDFLP PKVDSSVVI
Sbjct: 154 SATLLLQKEFARRLLACPGDSGGFNRLSANVKLVADVELVMDVSKRDFLPSPKVDSSVVI 213
Query: 183 IRPKAEIPDVNLDEWRAFTRTCF-SKKNKTLGATFKQKKKVIELLRLS 229
IRPK +IP+V+L EWR+FTRTCF S +NKTLGA FK K KV EL ++S
Sbjct: 214 IRPKHQIPNVDLHEWRSFTRTCFSSNRNKTLGALFKLKGKVFELFKIS 261
>gi|356495382|ref|XP_003516557.1| PREDICTED: probable dimethyladenosine transferase-like [Glycine
max]
Length = 345
Score = 330 bits (846), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 165/228 (72%), Positives = 187/228 (82%), Gaps = 2/228 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+KS+GQHI N R+LD+I R+S+INP DTVLEIGPGTGNLTLKLLE + KV AIEID R
Sbjct: 38 FYKSRGQHIFINPRILDTIFRRSAINPTDTVLEIGPGTGNLTLKLLEAAHKVVAIEIDHR 97
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
MV++L +R G D+L VI +DA++ FP+FDLVVANIPY ISSPLV KLVYG FR
Sbjct: 98 MVQVLEKRVLQRGLQDKLRVIERDAMRAPFPRFDLVVANIPYRISSPLVIKLVYGATPFR 157
Query: 124 SATLLLQKEFARRLLASPGDS-EFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
SATLLLQKEFARRLL PGDS FNRL+ NVKLVADVE VMDVSKRDFLP PKVDSSVVI
Sbjct: 158 SATLLLQKEFARRLLTCPGDSGGFNRLSANVKLVADVELVMDVSKRDFLPSPKVDSSVVI 217
Query: 183 IRPKAEIPDVNLDEWRAFTRTCF-SKKNKTLGATFKQKKKVIELLRLS 229
IRPK +IP+V+L EWRAFTRTCF S +NKTLGA FK K KV EL ++S
Sbjct: 218 IRPKPQIPNVDLHEWRAFTRTCFSSNRNKTLGALFKLKGKVFELFKIS 265
>gi|359476860|ref|XP_002267827.2| PREDICTED: dimethyladenosine transferase-like [Vitis vinifera]
Length = 355
Score = 310 bits (793), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 156/229 (68%), Positives = 180/229 (78%), Gaps = 28/229 (12%)
Query: 1 YIFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEI 60
++F +KS GQHILTN RVLD+IVRKS+I P DTVLEIGPGTGNLTL+LL+ +++V A+E+
Sbjct: 45 HMFLYKSWGQHILTNPRVLDTIVRKSNIKPTDTVLEIGPGTGNLTLRLLQAAQRVVAVEL 104
Query: 61 DERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTK 120
D RMVEIL +R A+ G D+L VI KDALKT+FPQFDLVVANIPYGISSPLVAKLV+G
Sbjct: 105 DARMVEILRKRVAEHGLEDQLTVICKDALKTDFPQFDLVVANIPYGISSPLVAKLVFGAN 164
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
FRSATLLLQKEFARRLLA+PGDSEFNRLAVNVK
Sbjct: 165 PFRSATLLLQKEFARRLLANPGDSEFNRLAVNVK-------------------------- 198
Query: 181 VIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLS 229
IRPKAE+PDV+L+EW AFTRTCFSKKNKTLGATFK K++V+EL RLS
Sbjct: 199 --IRPKAEVPDVDLNEWCAFTRTCFSKKNKTLGATFKHKRRVMELWRLS 245
>gi|125558476|gb|EAZ04012.1| hypothetical protein OsI_26151 [Oryza sativa Indica Group]
Length = 358
Score = 309 bits (791), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 145/228 (63%), Positives = 185/228 (81%), Gaps = 1/228 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV-SKKVHAIEIDE 62
HK +GQH+LTN RVLD+IVR++++ P D VLE+GPGTGNLT++LLE + +V A+EID
Sbjct: 37 LHKPRGQHLLTNPRVLDAIVRRAALRPGDAVLEVGPGTGNLTVRLLESPAARVSAVEIDP 96
Query: 63 RMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSF 122
RMV+ + R G +L VI DA++ EFP+FD+ VANIPYGISSPL+AKL++G F
Sbjct: 97 RMVDAVTARVDALGLAHKLTVIRADAVEAEFPEFDVCVANIPYGISSPLIAKLLFGPYRF 156
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
R+ATLLLQKEFARRL+A+PGDSE+NRLA NV++VAD +MDVSKRDF+P PKVDSS+V
Sbjct: 157 RAATLLLQKEFARRLVAAPGDSEYNRLAANVRMVADARLLMDVSKRDFVPMPKVDSSLVE 216
Query: 183 IRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLSK 230
IRP+A P+V+L EW AFTR+CF +KNKTLGA FKQK+KV+EL R S+
Sbjct: 217 IRPRAAEPNVDLAEWLAFTRSCFGQKNKTLGAIFKQKRKVLELFRRSR 264
>gi|125600382|gb|EAZ39958.1| hypothetical protein OsJ_24395 [Oryza sativa Japonica Group]
Length = 358
Score = 309 bits (791), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 145/228 (63%), Positives = 185/228 (81%), Gaps = 1/228 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV-SKKVHAIEIDE 62
HK +GQH+LTN RVLD+IVR++++ P D VLE+GPGTGNLT++LLE + +V A+EID
Sbjct: 37 LHKPRGQHLLTNPRVLDAIVRRAALRPGDAVLEVGPGTGNLTVRLLESPAARVSAVEIDP 96
Query: 63 RMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSF 122
RMV+ + R G +L VI DA++ EFP+FD+ VANIPYGISSPL+AKL++G F
Sbjct: 97 RMVDAVTARVDALGLAHKLTVIRADAVEAEFPEFDVCVANIPYGISSPLIAKLLFGPYRF 156
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
R+ATLLLQKEFARRL+A+PGDSE+NRLA NV++VAD +MDVSKRDF+P PKVDSS+V
Sbjct: 157 RAATLLLQKEFARRLVAAPGDSEYNRLAANVRMVADARLLMDVSKRDFVPMPKVDSSLVE 216
Query: 183 IRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLSK 230
IRP+A P+V+L EW AFTR+CF +KNKTLGA FKQK+KV+EL R S+
Sbjct: 217 IRPRAAEPNVDLAEWLAFTRSCFGQKNKTLGAIFKQKRKVLELFRRSR 264
>gi|115472299|ref|NP_001059748.1| Os07g0509600 [Oryza sativa Japonica Group]
gi|113611284|dbj|BAF21662.1| Os07g0509600, partial [Oryza sativa Japonica Group]
Length = 347
Score = 308 bits (790), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 145/228 (63%), Positives = 185/228 (81%), Gaps = 1/228 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV-SKKVHAIEIDE 62
HK +GQH+LTN RVLD+IVR++++ P D VLE+GPGTGNLT++LLE + +V A+EID
Sbjct: 26 LHKPRGQHLLTNPRVLDAIVRRAALRPGDAVLEVGPGTGNLTVRLLESPAARVSAVEIDP 85
Query: 63 RMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSF 122
RMV+ + R G +L VI DA++ EFP+FD+ VANIPYGISSPL+AKL++G F
Sbjct: 86 RMVDAVTARVDALGLAHKLTVIRADAVEAEFPEFDVCVANIPYGISSPLIAKLLFGPYRF 145
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
R+ATLLLQKEFARRL+A+PGDSE+NRLA NV++VAD +MDVSKRDF+P PKVDSS+V
Sbjct: 146 RAATLLLQKEFARRLVAAPGDSEYNRLAANVRMVADARLLMDVSKRDFVPMPKVDSSLVE 205
Query: 183 IRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLSK 230
IRP+A P+V+L EW AFTR+CF +KNKTLGA FKQK+KV+EL R S+
Sbjct: 206 IRPRAAEPNVDLAEWLAFTRSCFGQKNKTLGAIFKQKRKVLELFRRSR 253
>gi|414590381|tpg|DAA40952.1| TPA: hypothetical protein ZEAMMB73_963520 [Zea mays]
Length = 361
Score = 306 bits (783), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 143/227 (62%), Positives = 180/227 (79%), Gaps = 1/227 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV-SKKVHAIEIDE 62
HK +GQH+LTN RVLD+I R ++I+P D VLE+GPGTGNLT +LL + +V A+EID
Sbjct: 48 LHKPRGQHLLTNPRVLDAIARHAAISPGDAVLEVGPGTGNLTARLLASQAARVTAVEIDP 107
Query: 63 RMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSF 122
RMVE + RAA G + VI+ DA++ EFP+FD+ VANIPYGISSPL+AKL++G F
Sbjct: 108 RMVEAVTARAAALGLAHKFKVIAGDAVEVEFPEFDVCVANIPYGISSPLIAKLLFGPYRF 167
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
R+ATLLLQKEFARRL+A+PGD E+NRLA NV+LVADV +MDVSKRDF+P P+VDSS+V
Sbjct: 168 RTATLLLQKEFARRLVAAPGDGEYNRLAANVRLVADVRLLMDVSKRDFVPMPRVDSSLVE 227
Query: 183 IRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLS 229
IRP+ +P V++ EW AFTR CF +KNKTL A FKQK+ V+ELLR S
Sbjct: 228 IRPRGTVPGVDVSEWLAFTRVCFGQKNKTLAAIFKQKRMVVELLRRS 274
>gi|242045762|ref|XP_002460752.1| hypothetical protein SORBIDRAFT_02g034350 [Sorghum bicolor]
gi|241924129|gb|EER97273.1| hypothetical protein SORBIDRAFT_02g034350 [Sorghum bicolor]
Length = 356
Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/229 (62%), Positives = 183/229 (79%), Gaps = 1/229 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV-SKKVHAIEIDE 62
HK +GQH+LTN RVLD+IVR+++I+ D +LE+GPGTGNLT +LL + +V A+EID
Sbjct: 44 LHKPRGQHLLTNPRVLDAIVRRAAISSGDAILEVGPGTGNLTARLLASHAARVVAVEIDP 103
Query: 63 RMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSF 122
RMVE + RAA G D+L VI+ DA++ EFP+FD+ VANIPYGISSPL+AKL++G F
Sbjct: 104 RMVESVTARAAALGLADKLTVIAGDAVEVEFPEFDVCVANIPYGISSPLIAKLLFGPYRF 163
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
R+ATLLLQKEFARRL+A+PGD E+NRLA NV+LVADV +MDVSKRDF+P P+VDSS+V
Sbjct: 164 RTATLLLQKEFARRLVATPGDGEYNRLAANVRLVADVRLLMDVSKRDFVPMPRVDSSLVE 223
Query: 183 IRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLSKQ 231
IRP+ P V++ EW AFTR CF +KNKTLGA FKQK+ V+EL S++
Sbjct: 224 IRPRGIAPGVDVSEWLAFTRACFGQKNKTLGAIFKQKRMVMELFGRSQR 272
>gi|357122683|ref|XP_003563044.1| PREDICTED: dimethyladenosine transferase-like [Brachypodium
distachyon]
Length = 361
Score = 296 bits (758), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 138/229 (60%), Positives = 181/229 (79%), Gaps = 1/229 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV-SKKVHAIEIDE 62
HK +GQH+LTN RVLD+I R +++ P D VLE+GPGTGNLT +LL + +V A+EID
Sbjct: 40 LHKPRGQHLLTNPRVLDAIARHAALRPGDAVLEVGPGTGNLTARLLASPAARVSAVEIDP 99
Query: 63 RMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSF 122
RMV+ + RA+ +L VI DA++T+FP+FD+ VANIPYGISSPL+AKL++GT F
Sbjct: 100 RMVDAVTARASALNLAHKLTVILGDAVETDFPEFDVCVANIPYGISSPLIAKLLFGTYRF 159
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
R+ATLLLQKEFARRL+A PGDSE+NRLA NV +VA+ +MDVSKRDF+P P+VDSS+V
Sbjct: 160 RTATLLLQKEFARRLVAKPGDSEYNRLAANVHMVAETRLLMDVSKRDFVPMPRVDSSLVE 219
Query: 183 IRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLSKQ 231
IRP+ ++P+ +L EW AFTR CF +KNKTLGA FKQK+K++EL + S +
Sbjct: 220 IRPRVDMPEADLAEWLAFTRECFGQKNKTLGAIFKQKRKILELFKRSHR 268
>gi|326531118|dbj|BAK04910.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 351
Score = 296 bits (757), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 140/229 (61%), Positives = 180/229 (78%), Gaps = 1/229 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVS-KKVHAIEIDE 62
HK +GQH+LTN RVLD+IVR +++ P D VLE+GPGTGNLT +LL +V A+E D
Sbjct: 37 LHKPRGQHLLTNPRVLDAIVRHAALRPGDAVLEVGPGTGNLTARLLAFPVNRVTAVETDP 96
Query: 63 RMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSF 122
RMV+ + R +L VI DA++TEFP+FD+ VANIPYGISSPL+AKL++G F
Sbjct: 97 RMVDAVTARFGALDMTRKLTVIQGDAMETEFPEFDVCVANIPYGISSPLIAKLLFGAYHF 156
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
R+ATLLLQKEFARRL+A PGDSE+NRLA NV +VADV+ +MDVSKRDF+P P+VDSS+V
Sbjct: 157 RTATLLLQKEFARRLVAMPGDSEYNRLAANVGMVADVKLLMDVSKRDFVPMPRVDSSLVE 216
Query: 183 IRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLSKQ 231
IRP+A P+V+L EW FTR CF +KNKTLGA FKQK+K+++LL+ S++
Sbjct: 217 IRPRAAPPEVDLAEWLGFTRECFGQKNKTLGAIFKQKRKILDLLKRSQR 265
>gi|30698221|ref|NP_201437.2| Ribosomal RNA adenine dimethylase family protein [Arabidopsis
thaliana]
gi|21539437|gb|AAM53271.1| dimethyladenosine transferase-like protein [Arabidopsis thaliana]
gi|31711838|gb|AAP68275.1| At5g66360 [Arabidopsis thaliana]
gi|332010820|gb|AED98203.1| Ribosomal RNA adenine dimethylase family protein [Arabidopsis
thaliana]
Length = 352
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 148/228 (64%), Positives = 171/228 (75%), Gaps = 28/228 (12%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+F KSKGQH+LTN R+LDSIVR S I P DTVLEIGPGTGNLT+KLLE ++ V A+E+D
Sbjct: 61 LFLCKSKGQHLLTNTRILDSIVRSSDIRPTDTVLEIGPGTGNLTMKLLEAAQNVVAVELD 120
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
+RMVEIL +R +D GF D+L +I KD LKT+FP FDLVVANIPY ISSPLVAKLVYG+ +
Sbjct: 121 KRMVEILRKRVSDHGFADKLTIIQKDVLKTDFPHFDLVVANIPYNISSPLVAKLVYGSNT 180
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FRSATLLLQKEF+RRLLA+PGDS+FNRLAVNVK
Sbjct: 181 FRSATLLLQKEFSRRLLANPGDSDFNRLAVNVK--------------------------- 213
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLS 229
I PK IPDVN+ EW AFTRTCF KKNKTLG+ F+QKKKV+EL LS
Sbjct: 214 -ITPKEIIPDVNVQEWLAFTRTCFGKKNKTLGSMFRQKKKVMELQSLS 260
>gi|294461690|gb|ADE76404.1| unknown [Picea sitchensis]
Length = 390
Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 136/226 (60%), Positives = 170/226 (75%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I HKS+GQHILTN RVL SIV K+ + DTVLEIGPGTGNLTL+LL+ +++V A+EID
Sbjct: 69 IELHKSRGQHILTNPRVLKSIVDKAGVRETDTVLEIGPGTGNLTLELLQAARRVIAVEID 128
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RM+E +++R + RL ++ D L+T+ P FD+ VANIPY ISSPL+ KL+
Sbjct: 129 PRMIEAVHKRVQGTEMAQRLELVRGDILRTDLPSFDICVANIPYQISSPLIFKLLSTMPK 188
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR+ATL+LQKEF RRL+A PGDS FNRLAVNV L+A + +MDVSKRDF PCPKVDSSVV
Sbjct: 189 FRNATLMLQKEFGRRLVAKPGDSLFNRLAVNVDLLASAKLLMDVSKRDFTPCPKVDSSVV 248
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLR 227
I P+A P V+L EW FT CF++KNKTLGA F+QKK V L++
Sbjct: 249 RIEPRAWPPPVDLSEWNRFTLMCFTRKNKTLGAIFRQKKTVFCLMK 294
>gi|15226591|ref|NP_182264.1| dimethyladenosine transferase [Arabidopsis thaliana]
gi|2529685|gb|AAC62868.1| putative dimethyladenosine transferase [Arabidopsis thaliana]
gi|14532650|gb|AAK64053.1| putative dimethyladenosine transferase [Arabidopsis thaliana]
gi|21280901|gb|AAM44912.1| putative dimethyladenosine transferase [Arabidopsis thaliana]
gi|330255745|gb|AEC10839.1| dimethyladenosine transferase [Arabidopsis thaliana]
Length = 353
Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 125/218 (57%), Positives = 153/218 (70%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I FHKSKGQHIL N ++DSIV+K+ I D +LEIGPGTGNLT KLLE K+V A+E+D
Sbjct: 26 ISFHKSKGQHILKNPLLVDSIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKEVIAVELD 85
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV L RR + F +RL VI D LKTE P+FD+ VANIPY ISSPL KL++ S
Sbjct: 86 SRMVLELQRRFQGTPFSNRLKVIQGDVLKTELPRFDICVANIPYQISSPLTFKLLFHPTS 145
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A ++ Q+EFA RL+A PGD+ + RL+VN +L A V ++ V K +F P PKVDSSVV
Sbjct: 146 FRCAVIMYQREFAMRLVAQPGDNLYCRLSVNTQLYARVSHLLKVGKNNFRPPPKVDSSVV 205
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQK 219
I P+ P VN EW F R CF +KNKTLG+ FKQK
Sbjct: 206 RIEPRRPGPQVNKKEWDGFLRVCFIRKNKTLGSIFKQK 243
>gi|297824837|ref|XP_002880301.1| hypothetical protein ARALYDRAFT_904217 [Arabidopsis lyrata subsp.
lyrata]
gi|297326140|gb|EFH56560.1| hypothetical protein ARALYDRAFT_904217 [Arabidopsis lyrata subsp.
lyrata]
Length = 352
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 124/218 (56%), Positives = 153/218 (70%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I FHKSKGQHIL N ++DSIV+K+ I D +LEIGPGTGNLT KLLE K+V A+E+D
Sbjct: 26 ISFHKSKGQHILKNPLLVDSIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKEVIAVELD 85
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV L RR + + +RL VI D LKTE P+FD+ VANIPY ISSPL KL++ S
Sbjct: 86 SRMVLELQRRFQGTPYSNRLKVIQGDVLKTELPRFDICVANIPYQISSPLTFKLLFHPTS 145
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A ++ Q+EFA RL+A PGD+ + RL+VN +L A V ++ V K +F P PKVDSSVV
Sbjct: 146 FRCAVIMYQREFAMRLVAQPGDNLYCRLSVNTQLYARVSHLLKVGKNNFRPPPKVDSSVV 205
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQK 219
I P+ P VN EW F R CF +KNKTLG+ FKQK
Sbjct: 206 RIEPRRPGPQVNKKEWDGFLRVCFIRKNKTLGSIFKQK 243
>gi|224128336|ref|XP_002320304.1| predicted protein [Populus trichocarpa]
gi|222861077|gb|EEE98619.1| predicted protein [Populus trichocarpa]
Length = 353
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 125/218 (57%), Positives = 149/218 (68%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I FHKSKGQHIL N ++DSIV+KS I D VLEIGPGTGNLT KLLE K V AIE+D
Sbjct: 26 ISFHKSKGQHILKNPLLVDSIVQKSGIKSTDVVLEIGPGTGNLTKKLLEAGKMVVAIELD 85
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV L RR + F +RL VI D LKT+ P FD+ VANIPY ISSPL KL+ S
Sbjct: 86 PRMVLELQRRFQGTAFSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLNHQPS 145
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A ++ Q+EFA RL+A PGD+ + RL+VN +L A V ++ V K +F P PKVDSSVV
Sbjct: 146 FRCAIIMFQREFAMRLVAQPGDTLYCRLSVNTQLYARVSHLLKVGKNNFRPPPKVDSSVV 205
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQK 219
I P+ P VN EW F R CF +KNKTLG+ F+ K
Sbjct: 206 RIEPRKPRPQVNPKEWDGFIRICFIRKNKTLGSIFRIK 243
>gi|307107026|gb|EFN55270.1| hypothetical protein CHLNCDRAFT_23464 [Chlorella variabilis]
Length = 312
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 119/217 (54%), Positives = 149/217 (68%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I FHKSKGQHIL N V+ SIV K+ I D VLEIGPGTGNLT+KLLE +KKV A+E+D
Sbjct: 27 IEFHKSKGQHILKNPLVVQSIVDKAGIKSTDVVLEIGPGTGNLTMKLLERAKKVIAVELD 86
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV L RR + + ++L +I D +K + P FD+ VANIPY ISSPL KL+
Sbjct: 87 PRMVLELTRRVQGTPYQNQLQIIHGDVMKVQLPYFDICVANIPYQISSPLTFKLLAHRPC 146
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR+A ++ Q EFA RL+A PGD ++RLAVN +L+A V ++ V + +F P PKVDSSVV
Sbjct: 147 FRAAVIMYQHEFAMRLVAKPGDPAYSRLAVNTQLLARVNHLLKVGRNNFRPPPKVDSSVV 206
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
I P+ P VNL EW R CF +KNKTLGA F+Q
Sbjct: 207 RIEPRNPAPPVNLLEWDGLVRLCFGRKNKTLGAIFRQ 243
>gi|449479728|ref|XP_004155690.1| PREDICTED: probable dimethyladenosine transferase-like [Cucumis
sativus]
Length = 349
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 125/225 (55%), Positives = 153/225 (68%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I FHKSKGQHIL N ++DSIV+KS I D +LEIGPGTGNLT KLLE K V A+E+D
Sbjct: 25 ISFHKSKGQHILKNPLLVDSIVQKSGIKSTDVILEIGPGTGNLTKKLLECGKMVIAVELD 84
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV L RR D+ + RL VI D LKTE P FD+ VANIPY ISSPL KL+ +
Sbjct: 85 PRMVLELQRRFQDTPYSSRLKVIQGDVLKTELPYFDICVANIPYQISSPLTFKLLNHQPA 144
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A ++ Q+EFA RL+A PGD + RL VN +L+A V ++ V K +F P PKVDSSVV
Sbjct: 145 FRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLARVSHLLKVGKNNFRPPPKVDSSVV 204
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
I P+ +V EW F R CF++KNKTLG+ F+Q K V+ LL
Sbjct: 205 RIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQ-KSVLSLL 248
>gi|168033422|ref|XP_001769214.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679479|gb|EDQ65926.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 302
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 119/218 (54%), Positives = 153/218 (70%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F KSKGQHIL N ++ SIV+K+ + D VLEIGPGTGNLT+KLLEV KKV A+E+D
Sbjct: 19 IQFQKSKGQHILKNPLLVQSIVQKAGLKSTDIVLEIGPGTGNLTMKLLEVCKKVVAVELD 78
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV + RR + + ++L VI D LKTE P FD+ VAN+PY ISSP+ KL+
Sbjct: 79 PRMVLEVTRRVQGTPYANKLQVIQGDILKTELPYFDVCVANVPYQISSPITFKLLSHRPL 138
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A ++ QKEFA+RL+A PGDS F RL+VN +L+A V ++ V K +F P PKVDSSVV
Sbjct: 139 FRCAVIMFQKEFAQRLVAQPGDSLFCRLSVNTQLLARVFHLLKVGKNNFRPPPKVDSSVV 198
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQK 219
I P+ +P +N EW R CF++KNKTLG+ F+QK
Sbjct: 199 RIEPRNPLPPINFKEWDGLIRLCFNRKNKTLGSIFRQK 236
>gi|449449575|ref|XP_004142540.1| PREDICTED: probable dimethyladenosine transferase-like [Cucumis
sativus]
Length = 349
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 125/225 (55%), Positives = 153/225 (68%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I FHKSKGQHIL N ++DSIV+KS I D +LEIGPGTGNLT KLLE K V A+E+D
Sbjct: 25 ISFHKSKGQHILKNPLLVDSIVQKSGIKSTDVILEIGPGTGNLTKKLLECGKMVIAVELD 84
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV L RR D+ + RL VI D LKTE P FD+ VANIPY ISSPL KL+ +
Sbjct: 85 PRMVLELQRRFQDTPYSSRLKVIQGDVLKTELPYFDICVANIPYQISSPLTFKLLNHQPA 144
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A ++ Q+EFA RL+A PGD + RL VN +L+A V ++ V K +F P PKVDSSVV
Sbjct: 145 FRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLARVSHLLKVGKNNFRPPPKVDSSVV 204
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
I P+ +V EW F R CF++KNKTLG+ F+Q K V+ LL
Sbjct: 205 RIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQ-KSVLSLL 248
>gi|302844675|ref|XP_002953877.1| hypothetical protein VOLCADRAFT_106150 [Volvox carteri f.
nagariensis]
gi|300260689|gb|EFJ44906.1| hypothetical protein VOLCADRAFT_106150 [Volvox carteri f.
nagariensis]
Length = 384
Score = 239 bits (609), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 119/215 (55%), Positives = 148/215 (68%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
FHKSKGQHIL N V+ +IV K+ + D VLEIGPGTGNLT+KLLE +KKV AIE+D R
Sbjct: 35 FHKSKGQHILKNPLVVQAIVDKAGVKSTDVVLEIGPGTGNLTVKLLEKAKKVIAIELDPR 94
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
MV L RR + + + L +I D ++ E P FDL VANIPY ISSPL KL+ +FR
Sbjct: 95 MVLELQRRVQGTAYANNLQIIHGDFMRVELPYFDLCVANIPYNISSPLTFKLLAHRPAFR 154
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+A ++ Q EFA RL+A PGD ++RLAVN +L+A V ++ V K +F P PKVDSSVV I
Sbjct: 155 AAVIMYQHEFAMRLVAKPGDQLYSRLAVNTQLLARVSHLLKVGKNNFRPPPKVDSSVVRI 214
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
P+ P VN EW R CFS+KNKTLGA F+Q
Sbjct: 215 EPRHPPPPVNFLEWDGLVRLCFSRKNKTLGAIFRQ 249
>gi|357455725|ref|XP_003598143.1| Dimethyladenosine transferase [Medicago truncatula]
gi|355487191|gb|AES68394.1| Dimethyladenosine transferase [Medicago truncatula]
Length = 351
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 128/239 (53%), Positives = 158/239 (66%), Gaps = 10/239 (4%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I FHKSKGQHIL N ++D+IV+KS I D VLEIGPGTGNLT KLLE KKV A+EID
Sbjct: 24 ISFHKSKGQHILKNPLLVDTIVQKSGIKTTDVVLEIGPGTGNLTKKLLEAGKKVIAVEID 83
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV LN+R + RL VI D LKTE P FD+ VANIPY ISSPL KL+ +
Sbjct: 84 PRMVLELNKRFQGTP-SSRLTVIQGDVLKTELPYFDICVANIPYQISSPLTFKLLKHQPA 142
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A ++ Q+EFA RL+A PGD + RL VN +L A + ++ V + +F P PKVDSSVV
Sbjct: 143 FRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLHARISHLLKVGRNNFRPPPKVDSSVV 202
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKK---------KVIELLRLSKQ 231
I PK +VN EW F R CF++KNKTLGA F+QK K ++ L+LS++
Sbjct: 203 RIEPKKPRHEVNQKEWDGFLRICFNRKNKTLGAIFRQKNVISMLEKNYKTVQALKLSQE 261
>gi|115481328|ref|NP_001064257.1| Os10g0183900 [Oryza sativa Japonica Group]
gi|110288720|gb|ABG65951.1| dimethyladenosine transferase, putative, expressed [Oryza sativa
Japonica Group]
gi|113638866|dbj|BAF26171.1| Os10g0183900 [Oryza sativa Japonica Group]
gi|215704636|dbj|BAG94264.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218184228|gb|EEC66655.1| hypothetical protein OsI_32926 [Oryza sativa Indica Group]
Length = 364
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 124/226 (54%), Positives = 155/226 (68%), Gaps = 2/226 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVS-KKVHAIEI 60
I F KSKGQHIL N ++DSIV K+ + P DTVLEIGPGTGNLT +LL+ K V A+E+
Sbjct: 32 IPFEKSKGQHILRNPALVDSIVEKAGLKPTDTVLEIGPGTGNLTKRLLQAGVKAVVAVEL 91
Query: 61 DERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTK 120
D RMV LNRR RL VI D LK + P FD+ VANIPY ISSPL KL+
Sbjct: 92 DPRMVLELNRRFQGDPLASRLKVIQGDVLKCDLPYFDICVANIPYQISSPLTFKLLSHRP 151
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
FR A ++ Q+EFA RL+A PGDS + RL+VNV+L++ V ++ V + +F P PKVDSSV
Sbjct: 152 IFRCAVIMFQREFAMRLVAQPGDSLYCRLSVNVQLLSRVSHLLKVGRNNFRPPPKVDSSV 211
Query: 181 VIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
V I P+ +P V+ EW R CF++KNKTLGA FKQ K+V+ELL
Sbjct: 212 VRIEPRKPLPPVSFKEWDGLVRLCFNRKNKTLGAIFKQ-KRVLELL 256
>gi|255576485|ref|XP_002529134.1| dimethyladenosine transferase, putative [Ricinus communis]
gi|223531413|gb|EEF33247.1| dimethyladenosine transferase, putative [Ricinus communis]
Length = 350
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 124/225 (55%), Positives = 151/225 (67%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I FHKSKGQHIL N ++D+IV KS I D +LEIGPGTGNLT KLLE K V A+E+D
Sbjct: 25 ISFHKSKGQHILKNPLLVDTIVEKSGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 84
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV L RR + +RL VI D LKT+ P FD+ VANIPY ISSPL KL+ S
Sbjct: 85 PRMVLELQRRFQGTPMSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLNHQPS 144
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A ++ Q+EFA RL+A PGD+ + RL+VN +L A V ++ V K +F P PKVDSSVV
Sbjct: 145 FRCAIIMFQREFAMRLVAQPGDTLYCRLSVNTQLYARVSHLLKVGKNNFRPPPKVDSSVV 204
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
I P+ P VN EW F R CF +KNKTLG+ F+ K V+ LL
Sbjct: 205 RIEPRKPRPQVNAKEWDGFIRICFIRKNKTLGSIFR-IKNVLSLL 248
>gi|147791996|emb|CAN77505.1| hypothetical protein VITISV_017803 [Vitis vinifera]
Length = 350
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 121/225 (53%), Positives = 152/225 (67%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ FHKSKGQHIL N ++DSIV KS I D +LEIGPGTGNLT KLLE K V A+E+D
Sbjct: 25 VTFHKSKGQHILKNPLLVDSIVEKSGIKSTDVILEIGPGTGNLTKKLLEAGKSVIAVEVD 84
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV L RR + +RL VI D L+ + P FD+ VANIPY ISSPL KL+
Sbjct: 85 PRMVLELQRRFQGTPLSNRLEVIQGDVLRCDLPYFDICVANIPYQISSPLTFKLLAHRPV 144
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A ++ Q+EFA RL+A PGD+ + RL+VN +L+A V ++ V K +F P PKVDSSVV
Sbjct: 145 FRCAVIMFQREFAMRLVAQPGDNLYCRLSVNTQLLARVSHLLKVGKNNFRPPPKVDSSVV 204
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
I P+ +P VN EW R CF++KNKTLG+ F+Q K V+ LL
Sbjct: 205 RIEPRKPLPPVNFKEWDGLVRLCFNRKNKTLGSIFRQ-KSVLSLL 248
>gi|225437553|ref|XP_002276165.1| PREDICTED: probable dimethyladenosine transferase-like [Vitis
vinifera]
Length = 350
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 121/225 (53%), Positives = 152/225 (67%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ FHKSKGQHIL N ++DSIV KS I D +LEIGPGTGNLT KLLE K V A+E+D
Sbjct: 25 VTFHKSKGQHILKNPLLVDSIVEKSGIKSTDVILEIGPGTGNLTKKLLEAGKSVIAVEVD 84
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV L RR + +RL VI D L+ + P FD+ VANIPY ISSPL KL+
Sbjct: 85 PRMVLELQRRFQGTPLSNRLKVIQGDVLRCDLPYFDICVANIPYQISSPLTFKLLAHRPV 144
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A ++ Q+EFA RL+A PGD+ + RL+VN +L+A V ++ V K +F P PKVDSSVV
Sbjct: 145 FRCAVIMFQREFAMRLVAQPGDNLYCRLSVNTQLLARVSHLLKVGKNNFRPPPKVDSSVV 204
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
I P+ +P VN EW R CF++KNKTLG+ F+Q K V+ LL
Sbjct: 205 RIEPRKPLPPVNFKEWDGLVRLCFNRKNKTLGSIFRQ-KSVLSLL 248
>gi|226500226|ref|NP_001150423.1| LOC100284053 [Zea mays]
gi|195639144|gb|ACG39040.1| dimethyladenosine transferase [Zea mays]
gi|413935817|gb|AFW70368.1| dimethyladenosine transferase [Zea mays]
Length = 354
Score = 237 bits (604), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 124/226 (54%), Positives = 155/226 (68%), Gaps = 2/226 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVS-KKVHAIEI 60
I F KSKGQHIL N ++DSIV K+ + P DTVLEIGPGTGNLT +LLE K V A+E+
Sbjct: 23 IPFEKSKGQHILRNPALVDSIVAKAGLKPTDTVLEIGPGTGNLTKRLLEAGVKAVVAVEL 82
Query: 61 DERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTK 120
D RMV LNRR RL VI D LK + P FD+ VANIPY ISSPL KL+
Sbjct: 83 DPRMVLELNRRFQGHPLSSRLKVIQGDVLKCDLPYFDICVANIPYQISSPLTFKLLSHRP 142
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
FR A ++ Q+EFA RL+A PGDS + RL+VNV+L++ V ++ V + +F P PKVDSSV
Sbjct: 143 IFRCAVIMFQREFAMRLVAQPGDSLYCRLSVNVQLLSRVSHLLKVGRNNFRPPPKVDSSV 202
Query: 181 VIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
V I P+ +P V+ EW R CF++KNKTLG+ FKQ K+V+ELL
Sbjct: 203 VRIEPRKPLPPVSFKEWDGLVRICFNRKNKTLGSLFKQ-KRVLELL 247
>gi|148907015|gb|ABR16651.1| unknown [Picea sitchensis]
Length = 346
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 119/218 (54%), Positives = 151/218 (69%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F KSKGQHIL N ++ +IV+K+ I D VLEIGPGTGNLT+KLLEV+KKV A+E+D
Sbjct: 21 IQFQKSKGQHILKNPMLVQTIVQKAGIKSTDIVLEIGPGTGNLTMKLLEVAKKVIAVELD 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV L RR + RL VI D LK+E P FD+ VANIPY ISSPL KL+
Sbjct: 81 PRMVLELQRRVQGTSSAIRLQVIQGDVLKSELPYFDVCVANIPYQISSPLTFKLLSHRPI 140
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A ++ Q+EFA RL+A PGD+ + RL+VN +L+A V ++ V K +F P PKVDSSVV
Sbjct: 141 FRCAIIMFQREFAMRLVAKPGDNLYCRLSVNTQLLARVSHLLKVGKNNFRPPPKVDSSVV 200
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQK 219
I P+ +P ++ EW R CF++KNKTLGA F+QK
Sbjct: 201 RIEPRNPLPPISFKEWDGMVRLCFNRKNKTLGAIFRQK 238
>gi|242045760|ref|XP_002460751.1| hypothetical protein SORBIDRAFT_02g034340 [Sorghum bicolor]
gi|241924128|gb|EER97272.1| hypothetical protein SORBIDRAFT_02g034340 [Sorghum bicolor]
Length = 396
Score = 236 bits (601), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 130/248 (52%), Positives = 163/248 (65%), Gaps = 21/248 (8%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAI-EIDE 62
HK +GQH+LTN RVLD+IVR+++I P D VLE+GPGTGNLT++LL A EID
Sbjct: 34 LHKRRGQHLLTNPRVLDAIVRRAAIRPGDAVLEVGPGTGNLTVRLLASPAASVAAVEIDP 93
Query: 63 RMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSF 122
RM + RA D G +L V + DA+K +FP+FD V+NIPY ISSPL AKL++G+ F
Sbjct: 94 RMAAAVAARARDLGLAHKLTVTTGDAMKVDFPEFDACVSNIPYAISSPLTAKLLFGSYRF 153
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
R+ATLL+Q+EFARRL+ +PG E N LA NV+LVA V +MDVSK DF+P P VDSS+V
Sbjct: 154 RTATLLVQREFARRLVGAPGHGEHNHLATNVRLVAHVSLLMDVSKNDFVPVPGVDSSLVE 213
Query: 183 I-----RPKAEIPDVNLDEWRAFTRTCFS---------------KKNKTLGATFKQKKKV 222
I RP P ++LDEW F R CF KK KTLG FKQK+
Sbjct: 214 IRMKEVRPTEVEPGISLDEWLEFARVCFGQHQLQQQQEKKKKRKKKEKTLGTIFKQKEMA 273
Query: 223 IELLRLSK 230
+EL RLS+
Sbjct: 274 MELFRLSR 281
>gi|384251803|gb|EIE25280.1| dimethyladenosine transferase [Coccomyxa subellipsoidea C-169]
Length = 362
Score = 235 bits (600), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 147/217 (67%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F KSKGQHIL N +V+ SIV K+ + D VLEIGPGTGNLTLKLLE +KKV A+E+D
Sbjct: 28 IEFLKSKGQHILKNPQVVQSIVDKAGVKSTDVVLEIGPGTGNLTLKLLERAKKVIAVEVD 87
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV L RR + F L +I D +K + P FD+ VANIPY ISSPL KL+ +
Sbjct: 88 PRMVLELQRRVQGTQFASHLQIIQGDVMKQDLPFFDICVANIPYQISSPLTFKLLAHRPA 147
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR+A ++ Q EFA RL+A PGDS F RLAVN +L+A V ++ V + +F P PKVDSSVV
Sbjct: 148 FRAAVIMFQHEFAMRLVARPGDSLFCRLAVNTQLLACVSHLLKVGRNNFRPPPKVDSSVV 207
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
I P+ P VN EW R CF +KNKTLGA F+Q
Sbjct: 208 RIEPRHPPPPVNFREWDGLVRVCFGRKNKTLGAIFRQ 244
>gi|357144702|ref|XP_003573385.1| PREDICTED: probable dimethyladenosine transferase-like
[Brachypodium distachyon]
Length = 354
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/226 (53%), Positives = 155/226 (68%), Gaps = 2/226 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVS-KKVHAIEI 60
I F KSKGQHIL N ++DSI+ K+ + P DTVLEIGPGTGNLT +LLE K V A+E+
Sbjct: 23 IPFEKSKGQHILKNPALVDSIIAKAGLKPTDTVLEIGPGTGNLTKRLLEAGVKAVVAVEL 82
Query: 61 DERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTK 120
D RMV L+RR RL VI D LK + P FD+ VANIPY ISSPL KL+
Sbjct: 83 DPRMVLELSRRFQGHPLSSRLKVIQGDVLKCDLPYFDICVANIPYQISSPLTFKLLSHRP 142
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
FR A ++ Q+EFA RL+A PGD+ + RL+VNV+L++ V ++ V + +F P PKVDSSV
Sbjct: 143 IFRCAVIMFQREFAMRLVAQPGDTLYCRLSVNVQLLSRVSHLLKVGRNNFRPPPKVDSSV 202
Query: 181 VIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
V I P+ +P V+ EW R CF++KNKTLGA FKQ K+V+ELL
Sbjct: 203 VRIEPRKPLPPVSFKEWDGLVRVCFNRKNKTLGAIFKQ-KRVLELL 247
>gi|363814491|ref|NP_001242880.1| uncharacterized protein LOC100819707 [Glycine max]
gi|255636797|gb|ACU18732.1| unknown [Glycine max]
Length = 308
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 125/225 (55%), Positives = 152/225 (67%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I FHKSKGQHIL N ++DSIV K+ + D +LEIGPGTGNLT KLLE KKV AIEID
Sbjct: 26 ISFHKSKGQHILKNPLLVDSIVEKAGVKSTDVILEIGPGTGNLTKKLLEAGKKVIAIEID 85
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV L RR + +RL VI D LKTE P FD+ VANIPY ISSPL KL+ +
Sbjct: 86 PRMVLELQRRFQGTPHSNRLTVIQGDVLKTELPYFDICVANIPYQISSPLTFKLLKHEPA 145
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR+A ++ Q+EFA RL+A PGD + RL VN +L A V ++ V + +F P PKVDSSVV
Sbjct: 146 FRAAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLHARVFHLLKVGRNNFRPPPKVDSSVV 205
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
I P+ +V EW F R CF++KNKTLG+ F+Q K VI LL
Sbjct: 206 RIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQ-KSVISLL 249
>gi|159462946|ref|XP_001689703.1| dimethyladenosine transferase [Chlamydomonas reinhardtii]
gi|158283691|gb|EDP09441.1| dimethyladenosine transferase [Chlamydomonas reinhardtii]
Length = 352
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 118/215 (54%), Positives = 148/215 (68%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
FHKSKGQHIL N V+ +IV K+ + D VLEIGPGTGNLT+KLLE +KKV A+E+D R
Sbjct: 41 FHKSKGQHILRNPLVVQAIVDKAGVKSTDVVLEIGPGTGNLTVKLLEKAKKVIAVELDPR 100
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
MV L RR + + + L +I D ++ E P FDL VANIPY ISSPL KL+ +FR
Sbjct: 101 MVLELQRRVQGTPYANNLQIIHGDFMRVELPYFDLCVANIPYNISSPLTFKLLAHRPAFR 160
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+A ++ Q EFA RL+A GD+ ++RLAVN +L+A V ++ V K +F P PKVDSSVV I
Sbjct: 161 AAVIMYQHEFAMRLVAKAGDNLYSRLAVNTQLLARVSHLLKVGKNNFRPPPKVDSSVVRI 220
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
P+ P VN EW R CFS+KNKTLGA FKQ
Sbjct: 221 EPRHPPPPVNFLEWDGLVRLCFSRKNKTLGAIFKQ 255
>gi|302800922|ref|XP_002982218.1| hypothetical protein SELMODRAFT_116036 [Selaginella moellendorffii]
gi|300150234|gb|EFJ16886.1| hypothetical protein SELMODRAFT_116036 [Selaginella moellendorffii]
Length = 312
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 120/225 (53%), Positives = 157/225 (69%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+KS+GQHIL N V+ SIV+K+ + D VLEIGPGTGNLT+KLLEV+KKV A+E+D
Sbjct: 22 IQFYKSRGQHILKNPLVVQSIVQKAGLKSTDIVLEIGPGTGNLTVKLLEVAKKVIAVELD 81
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV L RR + + L +I D LKTE P FD+ VANIPY ISSPL KL+
Sbjct: 82 PRMVLELQRRVQGTPQANHLQIIQGDVLKTELPYFDVCVANIPYQISSPLTFKLLSHRPL 141
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR+A ++ QKEFA RL+A P D + RL+VN +L+A V+ ++ V K +F P PKVDSSVV
Sbjct: 142 FRAAVIMFQKEFAMRLVAKPADPLYCRLSVNTQLLARVDHLLKVGKNNFRPPPKVDSSVV 201
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
I P+ +P V+ EW R CF++KNKTLG+ F+Q K V++L+
Sbjct: 202 RIEPRNPLPPVSFKEWDGLVRLCFNRKNKTLGSIFRQ-KNVVQLV 245
>gi|356548063|ref|XP_003542423.1| PREDICTED: probable dimethyladenosine transferase-like [Glycine
max]
Length = 352
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 124/225 (55%), Positives = 152/225 (67%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I FHKSKGQHIL N ++DSIV K+ + D +LEIGPGTGNLT KLLE KKV A+EID
Sbjct: 26 ISFHKSKGQHILKNPLLVDSIVEKAGVKSTDVILEIGPGTGNLTKKLLEAGKKVIAVEID 85
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV L RR + +RL VI D LKTE P FD+ VANIPY ISSPL KL+ +
Sbjct: 86 PRMVLELQRRFQGTPHSNRLTVIQGDVLKTELPYFDICVANIPYQISSPLTFKLLKHEPA 145
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR+A ++ Q+EFA RL+A PGD + RL VN +L A V ++ V + +F P PKVDSSVV
Sbjct: 146 FRAAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLHARVFHLLKVGRNNFRPPPKVDSSVV 205
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
I P+ +V EW F R CF++KNKTLG+ F+Q K VI LL
Sbjct: 206 RIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQ-KSVISLL 249
>gi|302821163|ref|XP_002992246.1| hypothetical protein SELMODRAFT_186635 [Selaginella moellendorffii]
gi|300140013|gb|EFJ06743.1| hypothetical protein SELMODRAFT_186635 [Selaginella moellendorffii]
Length = 312
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 119/225 (52%), Positives = 157/225 (69%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+KS+GQHIL N ++ SIV+K+ + D VLEIGPGTGNLT+KLLEV+KKV A+E+D
Sbjct: 22 IQFYKSRGQHILKNPLIVQSIVQKAGLKSTDIVLEIGPGTGNLTVKLLEVAKKVIAVELD 81
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV L RR + + L +I D LKTE P FD+ VANIPY ISSPL KL+
Sbjct: 82 PRMVLELQRRVQGTPQANHLQIIQGDVLKTELPYFDVCVANIPYQISSPLTFKLLSHRPL 141
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR+A ++ QKEFA RL+A P D + RL+VN +L+A V+ ++ V K +F P PKVDSSVV
Sbjct: 142 FRAAVIMFQKEFAMRLVAKPADPLYCRLSVNTQLLARVDHLLKVGKNNFRPPPKVDSSVV 201
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
I P+ +P V+ EW R CF++KNKTLG+ F+Q K V++L+
Sbjct: 202 RIEPRNPLPPVSFKEWDGLVRLCFNRKNKTLGSIFRQ-KNVVQLV 245
>gi|307172086|gb|EFN63666.1| Probable dimethyladenosine transferase [Camponotus floridanus]
Length = 263
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 117/225 (52%), Positives = 154/225 (68%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+KSKGQHIL N ++ S+V K+++ P D VLEIGPGTGN+T+K+LE +KKV A EID
Sbjct: 18 ILFNKSKGQHILKNPLIIQSMVEKAALKPTDVVLEIGPGTGNMTVKMLEKAKKVIACEID 77
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV L +R + + +L ++ D LK++ P FDL VANIPY ISSPL+ KL+
Sbjct: 78 PRMVAELQKRVQGTVYQSKLQIMVGDVLKSDLPFFDLCVANIPYQISSPLIFKLLSHRPI 137
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+S+VV
Sbjct: 138 FRCAVLMFQREFAERLVAKPGDKLYCRLSINTQLLARVDMLMKVGKNNFRPPPKVESNVV 197
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
I P+ P +N EW TR F +KNKTL ATFKQ VI LL
Sbjct: 198 RIEPRNPPPPINYQEWDGLTRIAFIRKNKTLSATFKQ-TTVITLL 241
>gi|412993558|emb|CCO14069.1| dimethyladenosine transferase [Bathycoccus prasinos]
Length = 338
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 119/225 (52%), Positives = 148/225 (65%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F KS GQHIL N ++DSI++KS D LEIGPGTGNLT+KLLE KKV AIE D
Sbjct: 33 IQFLKSYGQHILKNPAIVDSIIQKSGAKSTDVALEIGPGTGNLTMKLLETCKKVVAIEYD 92
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV L RR S + +L +I D +K E P FD+ VAN+PY ISSPL KL+
Sbjct: 93 ARMVLELQRRVQGSPYQSKLEIIQGDFMKVELPYFDVCVANVPYQISSPLTFKLLSHRPQ 152
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FRSATL+ Q+EFA R++A GD+++ RLAVN +L+A + ++ V K +F P PKVDSSVV
Sbjct: 153 FRSATLMFQREFAMRMVAKAGDAQYCRLAVNTQLLAKTQHILKVGKNNFRPPPKVDSSVV 212
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
I P+ VN EW R CF +KNKTLG F+ K V+ELL
Sbjct: 213 RIEPRKPPVQVNFREWDGLIRLCFGRKNKTLGGIFR-TKTVLELL 256
>gi|242060710|ref|XP_002451644.1| hypothetical protein SORBIDRAFT_04g005150 [Sorghum bicolor]
gi|241931475|gb|EES04620.1| hypothetical protein SORBIDRAFT_04g005150 [Sorghum bicolor]
Length = 359
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 122/226 (53%), Positives = 154/226 (68%), Gaps = 2/226 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVS-KKVHAIEI 60
I F KSKGQHIL N ++DSIV K+ + P DTVLEIGPGTGNLT +LLE K V A+E+
Sbjct: 28 IPFEKSKGQHILKNPALVDSIVAKAGLKPTDTVLEIGPGTGNLTKRLLEAGVKAVVAVEL 87
Query: 61 DERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTK 120
D RMV LNRR RL VI D LK + P FD+ VANIPY ISSPL KL+
Sbjct: 88 DPRMVLELNRRFQGHPLSSRLKVIQGDVLKCDLPYFDICVANIPYQISSPLTFKLLSHRP 147
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
FR A ++ Q+EFA RL+A PGD+ + RL+VNV+L++ V ++ V K +F P PKVDSSV
Sbjct: 148 IFRCAVIMFQREFAMRLVAQPGDTLYCRLSVNVQLLSRVSHLLKVGKNNFRPPPKVDSSV 207
Query: 181 VIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
V I P+ +P V+ EW R CF++KN+TLG+ FK K+V+ELL
Sbjct: 208 VRIEPRKPLPPVSFKEWDGLVRICFNRKNRTLGSLFKT-KRVLELL 252
>gi|357136909|ref|XP_003570045.1| PREDICTED: probable dimethyladenosine transferase-like
[Brachypodium distachyon]
Length = 355
Score = 232 bits (592), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 120/226 (53%), Positives = 155/226 (68%), Gaps = 2/226 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVS-KKVHAIEI 60
I F KSKGQHIL N ++DSI+ K+ + P DTVLEIGPGTGNLT +LLE K V A+E+
Sbjct: 24 IPFEKSKGQHILKNPALVDSIIAKAGLKPTDTVLEIGPGTGNLTKRLLEAGVKAVVAVEL 83
Query: 61 DERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTK 120
D RMV L+RR ++ VI D LK + P FD+ VANIPY ISSPL KL+
Sbjct: 84 DPRMVLELSRRFQGHPLLAQMQVIQGDVLKCDLPYFDICVANIPYQISSPLTFKLLSHPP 143
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
FR A ++ Q+EFA RL+A PGD+ + RL+VNV+L++ V ++ V + +F P PKVDSSV
Sbjct: 144 IFRCAVIMFQREFAMRLVAQPGDTLYCRLSVNVQLLSRVSHLLKVGRNNFRPPPKVDSSV 203
Query: 181 VIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
V I P+ +P V+ EW R CF++KNKTLGA FKQ K+V+ELL
Sbjct: 204 VRIEPRKPLPPVSFKEWDGLVRVCFNRKNKTLGAIFKQ-KRVLELL 248
>gi|91091694|ref|XP_972612.1| PREDICTED: similar to dimethyladenosine transferase [Tribolium
castaneum]
gi|270001061|gb|EEZ97508.1| hypothetical protein TcasGA2_TC011352 [Tribolium castaneum]
Length = 306
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 117/217 (53%), Positives = 150/217 (69%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+KS GQHIL N V+ S++ K+++ P DTVLEIGPGTGNLTLKLLE K+V A EID
Sbjct: 21 ITFNKSFGQHILKNPLVITSMLDKAALKPSDTVLEIGPGTGNLTLKLLESVKQVVACEID 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L +R +S F +L ++ D LKTE P F + VANIPY ISSPLV KL+
Sbjct: 81 HRLVAELQKRVQNSPFKSKLQILIGDVLKTELPFFSVCVANIPYQISSPLVFKLLLHRPF 140
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ QKEFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+S+VV
Sbjct: 141 FRCAVLMFQKEFADRLVAVPGDKLYCRLSINTQLLARVDMLMKVGKNNFRPPPKVESAVV 200
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
I P+ P ++ EW TR FS+KNKTLGA F+Q
Sbjct: 201 RIEPRNPPPPISYTEWDGLTRIAFSRKNKTLGAAFRQ 237
>gi|34394642|dbj|BAC83949.1| Ribosomal RNA adenine dimethylase-like protein [Oryza sativa
Japonica Group]
Length = 261
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 108/167 (64%), Positives = 135/167 (80%)
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
MV+ + R G +L VI DA++ EFP+FD+ VANIPYGISSPL+AKL++G FR
Sbjct: 1 MVDAVTARVDALGLAHKLTVIRADAVEAEFPEFDVCVANIPYGISSPLIAKLLFGPYRFR 60
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ATLLLQKEFARRL+A+PGDSE+NRLA NV++VAD +MDVSKRDF+P PKVDSS+V I
Sbjct: 61 AATLLLQKEFARRLVAAPGDSEYNRLAANVRMVADARLLMDVSKRDFVPMPKVDSSLVEI 120
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLSK 230
RP+A P+V+L EW AFTR+CF +KNKTLGA FKQK+KV+EL R S+
Sbjct: 121 RPRAAEPNVDLAEWLAFTRSCFGQKNKTLGAIFKQKRKVLELFRRSR 167
>gi|290996728|ref|XP_002680934.1| predicted protein [Naegleria gruberi]
gi|284094556|gb|EFC48190.1| predicted protein [Naegleria gruberi]
Length = 308
Score = 229 bits (583), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 112/215 (52%), Positives = 146/215 (67%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F KS GQHIL N V+D ++ K+ I P DTVLEIGPGTGN+T+KLL+ +KKV AIE+D
Sbjct: 22 IQFQKSFGQHILINPGVIDHVIEKACIQPTDTVLEIGPGTGNMTVKLLQKAKKVIAIEVD 81
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV L +R + +L +I KDALK E P FDL +AN+PY ISSP+ KL+ S
Sbjct: 82 PRMVVELKKRVQGTALESKLQIIHKDALKVELPYFDLCIANLPYQISSPITFKLLAHQPS 141
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA+RL+A PGD+ + RL+VN +L+A + V+ VSK F P PKV+SS+V
Sbjct: 142 FRVAYLMYQREFAQRLVAKPGDNLYCRLSVNTQLLARCDHVVKVSKNSFRPPPKVESSIV 201
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATF 216
I PK P +N EW R F ++NK LG+ F
Sbjct: 202 RIEPKNPPPPINFLEWDGLARILFQRRNKQLGSVF 236
>gi|427787757|gb|JAA59330.1| Putative ribosomal rna adenine dimethylase [Rhipicephalus
pulchellus]
Length = 305
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/217 (51%), Positives = 147/217 (67%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F GQHIL N V++ ++ KS+I P D VLE+GPGTGN+T+KLLE +KKV A E+D
Sbjct: 20 IAFRTELGQHILKNPLVINGMIEKSAIRPTDVVLEVGPGTGNMTVKLLEKAKKVIACEVD 79
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L +R + H +L++I D LK+E P FD+ VAN+PY ISSP V KL+
Sbjct: 80 TRLVAELQKRVQGTHLHSKLHIIVGDVLKSELPFFDICVANLPYQISSPFVFKLLLHRPF 139
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR ATL+ Q+EFA+RL+A PGD + RL+VN +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 140 FRCATLMFQREFAQRLVAKPGDKLYCRLSVNTQLLARVDILMKVGKNNFRPPPKVESSVV 199
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
+ P+ P +N EW R CF +KNKTL A FKQ
Sbjct: 200 RLEPRNPPPAINFIEWDGLLRICFVRKNKTLSAAFKQ 236
>gi|449015973|dbj|BAM79375.1| probable dimethyladenosine transferase [Cyanidioschyzon merolae
strain 10D]
Length = 357
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/231 (48%), Positives = 160/231 (69%), Gaps = 3/231 (1%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
FHKS+GQHIL N V D++V K+ + P DTVLE+G GTGNLT++LL+ +KKV A E+D R
Sbjct: 18 FHKSRGQHILKNAAVTDAMVEKAQLRPTDTVLEVGAGTGNLTVRLLKYAKKVVAFEVDPR 77
Query: 64 MVEILNRRAADSG--FHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
M+ L +R G RL VI D L+ +P FD+ VANIPY ISSPL+ +L+ +
Sbjct: 78 MIIELTKRVQALGPELASRLEVIHGDVLRANWPFFDVFVANIPYQISSPLLFRLLAHRPA 137
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FRSA ++ Q+EFA+RL+A PGD + RLAVNV+L+A VE +M VS+ F P P+VDSSVV
Sbjct: 138 FRSAVIMFQREFAQRLIARPGDPAYGRLAVNVQLLARVEHLMKVSRNSFRPPPRVDSSVV 197
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLSKQK 232
I+ + P ++ EW R CF++K++TLG+ F Q +V++LL+ ++ +
Sbjct: 198 RIQLRQPAPPLDFREWDGLLRLCFARKHRTLGSLFGQ-SRVVQLLQTNRAR 247
>gi|225717560|gb|ACO14626.1| Probable dimethyladenosine transferase [Caligus clemensi]
Length = 313
Score = 227 bits (578), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 114/224 (50%), Positives = 149/224 (66%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+ S GQHIL N V+DSI+ KS + P DTVLEIGPGTGNLT KLL+ K+V E+D
Sbjct: 28 LMFNTSLGQHILKNPAVVDSIIEKSGLRPTDTVLEIGPGTGNLTAKLLDKVKRVIVCEVD 87
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV L +R S F +L ++ DA+KTE P FD+ VAN+PY ISSPLV KL+
Sbjct: 88 PRMVAELQKRFQHSPFKPKLEILVGDAIKTELPFFDVCVANVPYQISSPLVFKLLLHRPF 147
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A+PGD + RL++N +L++ V ++ V + +F P PKV+SSVV
Sbjct: 148 FRCAVLMFQREFAMRLIAAPGDKLYCRLSINTQLLSTVHHLLKVGRNNFRPPPKVESSVV 207
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIEL 225
I K P +N EW TR CF +KNKTLGA F Q ++ L
Sbjct: 208 RIEHKNPPPPINFKEWDGLTRICFVRKNKTLGAAFSQTPVLLTL 251
>gi|303279442|ref|XP_003059014.1| hypothetical protein MICPUCDRAFT_58407 [Micromonas pusilla
CCMP1545]
gi|226460174|gb|EEH57469.1| hypothetical protein MICPUCDRAFT_58407 [Micromonas pusilla
CCMP1545]
Length = 380
Score = 226 bits (576), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 116/225 (51%), Positives = 149/225 (66%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F KS GQHIL N ++++IV K + D VLEIGPGTGNLT++LLE +KKV AIE D
Sbjct: 28 IQFLKSYGQHILKNPMIVNAIVEKGGVKSTDVVLEIGPGTGNLTMRLLETAKKVIAIEFD 87
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV L RR + + L +IS D LK + P FD+ +AN PY ISSPLV KL+
Sbjct: 88 PRMVVELERRVSGTPHGHNLKIISGDFLKVDLPYFDVCIANCPYQISSPLVFKLLSHRPM 147
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FRSATL+ Q+EFA RL +PGD + RL+VN +L+A ++ V K +F P PKVDSSVV
Sbjct: 148 FRSATLMFQREFAMRLCVNPGDPLYCRLSVNAQLLARTTHILKVGKNNFRPPPKVDSSVV 207
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
I P++ + DVN EW R CF +KNKTLG F+ K V++L+
Sbjct: 208 RIEPRSPMIDVNFREWDGLVRLCFGRKNKTLGGIFRA-KTVLQLI 251
>gi|156542231|ref|XP_001600750.1| PREDICTED: probable dimethyladenosine transferase-like [Nasonia
vitripennis]
Length = 306
Score = 226 bits (575), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 111/217 (51%), Positives = 146/217 (67%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+K GQHIL N ++ S+V K+++ P D VLE+GPGTGN+T+K+LE SKKV A EID
Sbjct: 21 IVFNKDFGQHILKNPLIIQSMVEKAALRPTDVVLEVGPGTGNMTVKMLERSKKVIACEID 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV L +R + +L ++ D LK + P FDL VAN+PY ISSPLV KL+
Sbjct: 81 TRMVAELQKRVMGTPIQSKLQIMVGDVLKMDLPFFDLCVANVPYQISSPLVFKLLLHRPL 140
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD ++ RL+VN +L+A V+ +M V K +F P PKV+S+VV
Sbjct: 141 FRCAVLMFQREFAERLVAKPGDKDYCRLSVNTQLLARVDMLMKVGKNNFRPPPKVESNVV 200
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
I P+ P +N EW TR F +KNKTL A FKQ
Sbjct: 201 RIEPRNPPPPINYQEWDGLTRIAFVRKNKTLSAAFKQ 237
>gi|242247433|ref|NP_001156188.1| dimethyladenosine transferase-like [Acyrthosiphon pisum]
gi|239790841|dbj|BAH71955.1| ACYPI005364 [Acyrthosiphon pisum]
Length = 303
Score = 226 bits (575), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 114/224 (50%), Positives = 151/224 (67%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F K GQHIL N ++ +V KS++ P DTVLEIGPGTGNLT+KLLE K V A EID
Sbjct: 18 IMFKKDFGQHILKNPLIIQGMVEKSALLPTDTVLEIGPGTGNLTVKLLERVKTVIACEID 77
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L +R ++ + ++L + D LK+E P F+++VANIPY ISSPLV KL+
Sbjct: 78 VRLVAELKKRVMNTPYQNKLQIRVGDVLKSELPFFNVLVANIPYQISSPLVFKLLLHRPF 137
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+S+VV
Sbjct: 138 FRCAVLMFQREFAYRLVAKPGDKLYCRLSINTQLLARVDLIMKVGKNNFRPPPKVESNVV 197
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIEL 225
I P+ P +N +EW TR FS+KNKTLGA FKQ + L
Sbjct: 198 RIEPRNPPPPINFNEWDGLTRIAFSRKNKTLGAIFKQNAVAVTL 241
>gi|383854640|ref|XP_003702828.1| PREDICTED: probable dimethyladenosine transferase-like [Megachile
rotundata]
Length = 306
Score = 226 bits (575), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 112/217 (51%), Positives = 147/217 (67%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+ + GQHIL N V+ S+V K+++ P D VLEIGPGTGN+T+KLL+ +KKV A E+D
Sbjct: 21 ILFNTNIGQHILKNPLVIQSMVEKAALRPTDVVLEIGPGTGNMTVKLLDKAKKVIACEVD 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV L +R + + +L ++ D LKT+ P FDL VANIPY ISSPLV KL+
Sbjct: 81 TRMVAELQKRVQGTPYQPKLQIMIGDVLKTDLPFFDLCVANIPYQISSPLVFKLLLHRPL 140
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+S+VV
Sbjct: 141 FRCAVLMFQREFAERLVAKPGDKLYCRLSINTQLLARVDLLMKVGKNNFRPPPKVESNVV 200
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
I P+ P VN EW TR F +KNKTL A FKQ
Sbjct: 201 RIEPRNPPPPVNYQEWDGLTRIAFVRKNKTLSAVFKQ 237
>gi|340724499|ref|XP_003400619.1| PREDICTED: probable dimethyladenosine transferase-like [Bombus
terrestris]
Length = 306
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 111/217 (51%), Positives = 147/217 (67%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+ + GQHIL N V+ S+V K+++ P D VLEIGPGTGN+T+KLL+ +KKV A E+D
Sbjct: 21 ILFNTNIGQHILKNPLVIQSMVEKAAVRPTDVVLEIGPGTGNMTVKLLDKAKKVIACELD 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV L +R + + +L ++ D LKT+ P FDL VANIPY ISSPLV KL+
Sbjct: 81 ARMVAELQKRVQGTIYQSKLQIMIGDVLKTDLPFFDLCVANIPYQISSPLVFKLLLHRPL 140
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+S+VV
Sbjct: 141 FRCAVLMFQREFAERLVAKPGDKLYCRLSINTQLLARVDLLMKVGKNNFRPPPKVESNVV 200
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
I P+ P +N EW TR F +KNKTL A FKQ
Sbjct: 201 RIEPRNPPPPINYQEWDGLTRIAFVRKNKTLSAAFKQ 237
>gi|225714284|gb|ACO12988.1| Probable dimethyladenosine transferase [Lepeophtheirus salmonis]
Length = 312
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 113/224 (50%), Positives = 149/224 (66%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+ + GQHIL N V+DSIV +S + DTVLEIGPGTGNLT KLLE K+V E+D
Sbjct: 27 LVFNTTLGQHILKNPAVVDSIVEESGLRSTDTVLEIGPGTGNLTAKLLEKVKRVIVCEVD 86
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV L + S + +L++I DA+KT+ P FD+ VAN+PY ISSPLV KL+
Sbjct: 87 PRMVAELQKHFQHSSYKSKLDIIVGDAIKTDLPFFDVCVANVPYQISSPLVFKLLLHRPF 146
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA+RL+A PGD + RL++N +L++ V ++ V K +F P PKV+SSVV
Sbjct: 147 FRVAVLMFQREFAQRLIAPPGDKLYCRLSINTQLLSTVHHLLKVGKNNFRPPPKVESSVV 206
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIEL 225
I PK P +N EW TR CF +KNKTLGA F Q ++ L
Sbjct: 207 RIEPKNPPPPINFKEWDGLTRICFVRKNKTLGAAFSQTPVLLTL 250
>gi|260815743|ref|XP_002602632.1| hypothetical protein BRAFLDRAFT_225323 [Branchiostoma floridae]
gi|229287943|gb|EEN58644.1| hypothetical protein BRAFLDRAFT_225323 [Branchiostoma floridae]
Length = 306
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 116/225 (51%), Positives = 154/225 (68%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+K GQHIL N V+DS+V K+++ P DTVLEIGPGTGNLT+K+++ KKV A EID
Sbjct: 21 IGFNKQFGQHILKNPLVVDSMVEKAALRPTDTVLEIGPGTGNLTMKMIDRVKKVIACEID 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L +R + +L ++ DALKT+ P FD+ VANIPY ISSPLV KL+
Sbjct: 81 PRLVAELQKRVQGTPSAHKLQMMVGDALKTDLPFFDICVANIPYQISSPLVFKLLLHRPF 140
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA+RL+A PGD + RL++NV+L+A V+ +M + + +F P PKV+SSVV
Sbjct: 141 FRCAILMFQREFAQRLVAPPGDKLYCRLSLNVQLLARVDHLMKIGRNNFRPPPKVESSVV 200
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
+ PK P +N EW R F +KNKTLGA FK KV+ LL
Sbjct: 201 RLEPKNPPPPINFQEWDGMVRIAFLRKNKTLGAAFKN-SKVLSLL 244
>gi|350424981|ref|XP_003493975.1| PREDICTED: probable dimethyladenosine transferase-like [Bombus
impatiens]
Length = 306
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 111/217 (51%), Positives = 147/217 (67%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+ + GQHIL N V+ S+V K+++ P D VLEIGPGTGN+T+KLL+ +KKV A E+D
Sbjct: 21 ILFNTNIGQHILKNPLVIQSMVEKAAVRPTDVVLEIGPGTGNMTVKLLDKAKKVIACELD 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV L +R + + +L ++ D LKT+ P FDL VANIPY ISSPLV KL+
Sbjct: 81 VRMVAELQKRVQGTIYQSKLQIMIGDVLKTDLPFFDLCVANIPYQISSPLVFKLLLHRPL 140
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+S+VV
Sbjct: 141 FRCAVLMFQREFAERLVAKPGDKLYCRLSINTQLLARVDLLMKVGKNNFRPPPKVESNVV 200
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
I P+ P +N EW TR F +KNKTL A FKQ
Sbjct: 201 RIEPRNPPPPINYQEWDGLTRIAFVRKNKTLSAAFKQ 237
>gi|225709718|gb|ACO10705.1| Probable dimethyladenosine transferase [Caligus rogercresseyi]
Length = 313
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 112/222 (50%), Positives = 149/222 (67%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ + GQHIL N ++DSI+ KS + P DTVLEIGPGTGNLT KLL+V K+V IE+D R
Sbjct: 30 FNTTLGQHILKNPAIVDSIIDKSGLRPTDTVLEIGPGTGNLTAKLLQVVKRVIVIEVDPR 89
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
MV + +R S +L ++ DA+KT+ P FD+ VAN+PY ISSPLV KL+ FR
Sbjct: 90 MVSEIQKRFQHSPHRPKLEILVGDAIKTDLPFFDVCVANVPYQISSPLVFKLLIHRPFFR 149
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+A L+ Q+EFA RL+A PGD F RL++N +L++ V ++ V + +F P PKV+SSVV I
Sbjct: 150 AAILMFQREFALRLIAPPGDKLFCRLSINTQLLSTVHHLLKVGRNNFRPPPKVESSVVRI 209
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIEL 225
K P +N EW TR CF +KNKTLGA F Q ++ L
Sbjct: 210 EHKNPPPPINFKEWDGLTRICFVRKNKTLGAAFSQTPVLMTL 251
>gi|255082199|ref|XP_002508318.1| hypothetical protein MICPUN_84159 [Micromonas sp. RCC299]
gi|226523594|gb|ACO69576.1| hypothetical protein MICPUN_84159 [Micromonas sp. RCC299]
Length = 326
Score = 223 bits (567), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 120/227 (52%), Positives = 147/227 (64%), Gaps = 4/227 (1%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F KS GQHIL N +++SIV K + D VLEIGPGTGNLT++LLE +KKV AIE D
Sbjct: 40 IQFLKSYGQHILKNPMIVNSIVEKGGVKSTDVVLEIGPGTGNLTMRLLETAKKVIAIEFD 99
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV L RR + L +IS D LK + P FD+ VAN+PY ISSPLV KL+
Sbjct: 100 PRMVLELQRRVQGTPHQQNLTIISGDFLKVDLPYFDVCVANVPYQISSPLVFKLLSHRPM 159
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR+ATL+ Q+EFA RL PGD + RL+VN +L+A ++ V K +F P PKVDSSVV
Sbjct: 160 FRAATLMFQREFAMRLCVQPGDPLYCRLSVNTQLLARTTHLLKVGKNNFRPPPKVDSSVV 219
Query: 182 II--RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
I RP + IP N EW R CF +KNKTLG F+ K V+ELL
Sbjct: 220 RIEPRPISTIP-CNFKEWDGLVRLCFGRKNKTLGGIFR-TKTVLELL 264
>gi|25146882|ref|NP_496061.2| Protein E02H1.1 [Caenorhabditis elegans]
gi|27808654|sp|Q09522.2|DIM1_CAEEL RecName: Full=Probable dimethyladenosine transferase; AltName:
Full=Probable 18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=Probable 18S rRNA
dimethylase; AltName: Full=Probable
S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|20803714|emb|CAA87382.2| Protein E02H1.1 [Caenorhabditis elegans]
Length = 308
Score = 223 bits (567), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 114/223 (51%), Positives = 151/223 (67%), Gaps = 1/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ KGQHIL N V+++IV KS++ DTVLE+GPGTGNLT+K+LEV+K V A EID R
Sbjct: 24 FNTDKGQHILKNPGVVNAIVEKSALKATDTVLEVGPGTGNLTVKMLEVAKTVIACEIDPR 83
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M+ + +R + ++L V D +K E+P FD+ VAN+PY ISSP V KL+ R
Sbjct: 84 MIAEVKKRVMGTPLQNKLQVNGGDVMKMEWPFFDVCVANLPYQISSPFVQKLLLHRPLPR 143
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A L+ QKEFA RL+A PGD +++RL+VNV+L+A VE +M V + +F P PKVDS+VV I
Sbjct: 144 YAVLMFQKEFADRLVARPGDKDYSRLSVNVQLLAKVEMLMKVKRTEFRPPPKVDSAVVRI 203
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
PK P VN EW R CF +KNKTL A F+ VIE++
Sbjct: 204 APKNPPPPVNFVEWEGLLRLCFMRKNKTLMAIFRL-SNVIEVI 245
>gi|341879448|gb|EGT35383.1| hypothetical protein CAEBREN_28911 [Caenorhabditis brenneri]
gi|341882294|gb|EGT38229.1| hypothetical protein CAEBREN_11925 [Caenorhabditis brenneri]
Length = 308
Score = 223 bits (567), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 115/229 (50%), Positives = 153/229 (66%), Gaps = 1/229 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ KGQHIL N V+++IV KS++ DTVLE+GPGTGNLT+K+LEV+K V A EID R
Sbjct: 24 FNTDKGQHILKNPGVVNAIVEKSALKSTDTVLEVGPGTGNLTVKMLEVAKTVIACEIDPR 83
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M+ + +R + +L V D +K E+P FD+ VAN+PY ISSP V KL+ R
Sbjct: 84 MIAEVKKRVMGTPLQSKLQVNGGDVMKMEWPFFDVCVANLPYQISSPFVQKLLLHRPLPR 143
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A L+ QKEFA RL+A PGD +++RL+VNV+L+A VE +M V + +F P PKVDS+VV I
Sbjct: 144 YAVLMFQKEFADRLVARPGDKDYSRLSVNVQLLAKVEMLMKVKRTEFRPPPKVDSAVVRI 203
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLSKQK 232
PK P VN EW R CF +KNKTL A F+ VIE++ + +K
Sbjct: 204 APKNPPPPVNFVEWEGLLRLCFMRKNKTLLAIFRL-SNVIEIIETNYRK 251
>gi|242015107|ref|XP_002428215.1| dimethyladenosine transferase, putative [Pediculus humanus
corporis]
gi|212512776|gb|EEB15477.1| dimethyladenosine transferase, putative [Pediculus humanus
corporis]
Length = 306
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 111/217 (51%), Positives = 146/217 (67%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F KS GQHIL N V+ ++V K+++ D VLEIGPGTGN+T+KLL+ +KKV A E+D
Sbjct: 21 MLFKKSAGQHILKNPLVIQNMVEKAALKSTDIVLEIGPGTGNMTVKLLDKAKKVIACEVD 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV L +R + + +L +I D LK+E P F+ VANIPY ISSPLV KL+
Sbjct: 81 VRMVAELQKRVQCTPYQSKLEIIVGDVLKSELPFFNACVANIPYQISSPLVFKLLLHRPF 140
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ QKEFA RL+A PGD + RL++N +L+A V+ VM V+K +F P PKV+SSVV
Sbjct: 141 FRCAILMFQKEFAHRLVAKPGDKLYCRLSINTQLLARVDIVMKVAKNNFRPPPKVESSVV 200
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
I P+ P + EW TR F +KNKTLGA F+Q
Sbjct: 201 RIEPRNPPPPIQFKEWDGLTRIAFLRKNKTLGAAFRQ 237
>gi|452820627|gb|EME27667.1| dimethyladenosine transferase [Galdieria sulphuraria]
Length = 329
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 113/215 (52%), Positives = 141/215 (65%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K +GQHIL N V++SI+ K+++ P D VLEIGPGTGN+T+KLL++ KKV A+EID R
Sbjct: 16 FKKERGQHILKNPLVVNSILEKAALKPTDIVLEIGPGTGNMTVKLLQLVKKVIAVEIDPR 75
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L RR S +RL +I D LK E P FD+ VANIPY ISSPL+ KL+ R
Sbjct: 76 MTVELYRRVQFSPLKERLELIQADILKMELPYFDVCVANIPYQISSPLIFKLLAHRPFHR 135
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ L+LQ+EFA RL+A PG + RL+VN K +A V +M VS+ F P PKVDSSVV I
Sbjct: 136 YSVLMLQREFAMRLIAQPGSELYCRLSVNAKALARVSHLMKVSRNSFRPPPKVDSSVVRI 195
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
P+ P N EW R CF +KNKTLG KQ
Sbjct: 196 EPRNPPPPGNFLEWDGLLRICFQRKNKTLGGIMKQ 230
>gi|145349952|ref|XP_001419390.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579621|gb|ABO97683.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 320
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/226 (52%), Positives = 150/226 (66%), Gaps = 2/226 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F KS GQHIL N ++++IV K+ + D VLEIGPGTGNLT KLL+ KKV A+E D
Sbjct: 39 IQFLKSFGQHILKNPAIVNAIVDKAGVKSTDVVLEIGPGTGNLTTKLLDACKKVIAVEFD 98
Query: 62 ERMVEILNRRA-ADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTK 120
RMV L RR +D + RL +I D LK + P FD+ VAN+PY ISSPL+ KL+
Sbjct: 99 PRMVLELRRRVQSDPAQNSRLEIIQGDFLKVDLPYFDVCVANVPYQISSPLIFKLLAHRP 158
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
FRSATL+ Q+EFA RL+A PGD+ + RL+VN +L+A + ++ V K +F P PKVDSSV
Sbjct: 159 MFRSATLMFQREFAMRLVAPPGDALYCRLSVNTQLLARTQHILKVGKNNFRPPPKVDSSV 218
Query: 181 VIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
V I P+ VN EW R CF +KNKTLG F+ K V+ELL
Sbjct: 219 VRIEPRHPQIPVNFKEWDGLVRFCFGRKNKTLGGIFR-TKNVLELL 263
>gi|194745790|ref|XP_001955370.1| GF16271 [Drosophila ananassae]
gi|190628407|gb|EDV43931.1| GF16271 [Drosophila ananassae]
Length = 306
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 113/225 (50%), Positives = 150/225 (66%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+K GQHIL N V+ S++ K+++ P D VLEIGPGTGN+T+++LE +KKV A EID
Sbjct: 21 IVFNKDFGQHILKNPLVITSMLEKAALRPTDVVLEIGPGTGNMTVRMLEKAKKVIACEID 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+ L +R + +L V+ D LK E P FDL +AN+PY ISSPL+ KL+
Sbjct: 81 TRLAAELQKRVQATPLQPKLQVLIGDFLKAELPFFDLCIANVPYQISSPLIFKLLLHRPL 140
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA+RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 141 FRCAVLMFQREFAQRLVAKPGDKLYCRLSINTQLLARVDMLMKVGKNNFKPPPKVESSVV 200
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
+ PK P VN EW TR F +KNKTL ATFK VIE+L
Sbjct: 201 RLEPKNPPPPVNFTEWDGLTRIAFLRKNKTLAATFKV-SSVIEML 244
>gi|403370034|gb|EJY84877.1| Ribosomal RNA adenine dimethylase [Oxytricha trifallax]
Length = 424
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 113/217 (52%), Positives = 143/217 (65%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K+ GQHIL N V+ I+ KS I P D VLEIGPGTGNLT LLE SKKV A+EID R
Sbjct: 42 FDKAFGQHILKNPLVVQQIIEKSGIKPTDVVLEIGPGTGNLTQSLLERSKKVIAVEIDAR 101
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
MV +++R G+ + +I DA+KT P FDL +AN PY ISSPLV KL+ FR
Sbjct: 102 MVAEVSKRVNKLGYQHKFELIQGDAIKTPLPFFDLCIANTPYQISSPLVFKLLQHRPIFR 161
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A L+ Q+EFA+RL+A PG + RL+VNV+L+A V+ ++ VSK F P PKV+SSVV I
Sbjct: 162 CAVLMFQREFAQRLIAKPGSDMYCRLSVNVQLLARVDHLIKVSKNSFKPPPKVESSVVRI 221
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKK 220
PK P +N EW R CF +KNKT+ F+ K+
Sbjct: 222 EPKFPPPPINFTEWDGLVRLCFLRKNKTMSGIFRLKQ 258
>gi|145545245|ref|XP_001458307.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426126|emb|CAK90910.1| unnamed protein product [Paramecium tetraurelia]
Length = 353
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 113/218 (51%), Positives = 147/218 (67%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+KS GQHIL NQ++L IV KS+I P D VLEIGPGTGNLT LL+ +K+V +EID
Sbjct: 10 MVFNKSFGQHILINQQILQMIVDKSAIRPTDIVLEIGPGTGNLTELLLQRAKQVICVEID 69
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV L +R S + D+ +I D L E P FDL VAN+PY ISSPLV KL+
Sbjct: 70 PRMVIELTKRFKYSQYSDKFKLIQGDFLTAELPFFDLCVANVPYQISSPLVFKLLAQRPL 129
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
+R A L+ Q+EFA RL+A PG+ + RL+ NV++++ V+ +M V K +F P PKV+SSVV
Sbjct: 130 WRCAVLMFQQEFAFRLVAKPGNELYCRLSANVQMLSRVDHLMKVGKNNFKPPPKVESSVV 189
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQK 219
I PK IP++N EW R CF++KNK L A FK K
Sbjct: 190 RIEPKNPIPNINYIEWDGLLRICFNRKNKQLSAIFKNK 227
>gi|307211915|gb|EFN87842.1| Probable dimethyladenosine transferase [Harpegnathos saltator]
Length = 306
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 107/217 (49%), Positives = 148/217 (68%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+K GQHIL N ++ ++V K+++ P D +LE+GPGTGN+T+KLLE +KKV A E+D
Sbjct: 21 ILFNKDFGQHILKNPLIIQNMVEKAALRPTDVILEVGPGTGNMTIKLLEKAKKVIAYEVD 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L +R + + +L ++ D LK++ P FDL VANIPY ISSPLV KL+
Sbjct: 81 PRLVAELQKRVQGTLYQPKLEIMVGDVLKSDLPFFDLCVANIPYQISSPLVFKLLLHRPL 140
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+S+VV
Sbjct: 141 FRCAVLMFQREFAERLVAKPGDKLYCRLSINTQLLARVDMLMKVGKNNFKPPPKVESNVV 200
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
I P+ P +N EW + TR F +KNKTL A FKQ
Sbjct: 201 RIEPRNPSPPINYQEWDSLTRIAFLRKNKTLSAAFKQ 237
>gi|124087844|ref|XP_001346899.1| Ribosomal RNA adenine dimethylase [Paramecium tetraurelia strain
d4-2]
gi|145474821|ref|XP_001423433.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|50057288|emb|CAH03272.1| Ribosomal RNA adenine dimethylase, putative [Paramecium
tetraurelia]
gi|124390493|emb|CAK56035.1| unnamed protein product [Paramecium tetraurelia]
Length = 353
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/218 (51%), Positives = 147/218 (67%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+KS GQHIL NQ++L IV KS+I P D VLEIGPGTGNLT LL+ +K+V +EID
Sbjct: 10 MVFNKSFGQHILINQQILQMIVDKSAIRPTDIVLEIGPGTGNLTELLLQRAKQVICVEID 69
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV L +R S + D+ +I D L E P FDL VAN+PY ISSPLV KL+
Sbjct: 70 PRMVIELTKRFKYSQYSDKFKLIQGDFLTAELPFFDLCVANVPYQISSPLVFKLLAQRPL 129
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
+R A L+ Q+EFA RL+A PG+ + RL+ NV++++ V+ +M V K +F P PKV+SSVV
Sbjct: 130 WRCAVLMFQQEFAFRLVAKPGNELYCRLSANVQMLSRVDHLMKVGKNNFKPPPKVESSVV 189
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQK 219
I PK IP++N EW R CF++KNK L A FK K
Sbjct: 190 RIEPKNPIPNINYIEWDGLLRICFNRKNKQLSAIFKNK 227
>gi|195449214|ref|XP_002071976.1| GK22567 [Drosophila willistoni]
gi|194168061|gb|EDW82962.1| GK22567 [Drosophila willistoni]
Length = 306
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/225 (49%), Positives = 150/225 (66%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+K GQHIL N ++ +++ K+++ P D VLEIGPGTGN+T+++LE SKKV A EID
Sbjct: 21 IVFNKDFGQHILKNPLIITAMLEKAALRPTDVVLEIGPGTGNMTVRILEKSKKVIACEID 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+ L +R + +L V+ D LK E P FDL +AN+PY ISSPL+ KL+
Sbjct: 81 TRLAAELQKRVQATPLQPKLQVLIGDFLKAELPFFDLCIANVPYQISSPLIFKLLLHRPL 140
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA+RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 141 FRCAVLMFQQEFAQRLVAKPGDKLYCRLSINTQLLARVDMLMKVGKNNFRPPPKVESSVV 200
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
+ PK P VN EW TR F +KNKTL ATFK VIE+L
Sbjct: 201 RLEPKNPPPPVNFTEWDGLTRIAFLRKNKTLAATFKV-NSVIEML 244
>gi|268529208|ref|XP_002629730.1| Hypothetical protein CBG00961 [Caenorhabditis briggsae]
Length = 308
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/214 (51%), Positives = 145/214 (67%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ KGQHIL N V+++IV KS++ DTVLE+GPGTGNLT+K+LEV+K V A EID R
Sbjct: 24 FNTDKGQHILKNPGVVNAIVEKSALKSTDTVLEVGPGTGNLTVKMLEVAKTVIACEIDPR 83
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M+ + +R + +L V D +K E+P FD+ VAN+PY ISSP V KL+ R
Sbjct: 84 MIAEVKKRVMGTPLQTKLQVNGGDVMKQEWPFFDVCVANLPYQISSPFVQKLLLHRPLPR 143
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A L+ QKEFA RL+A PGD +++RL+VNV+L+A VE +M V + +F P PKVDS+VV I
Sbjct: 144 YAVLMFQKEFADRLVARPGDKDYSRLSVNVQLLAKVEMLMKVKRTEFRPPPKVDSAVVRI 203
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
PK P VN EW R CF +KNKTL A F+
Sbjct: 204 APKNPPPPVNFVEWEGLLRLCFMRKNKTLLAIFR 237
>gi|148233697|ref|NP_001089685.1| DIM1 dimethyladenosine transferase 1 homolog [Xenopus laevis]
gi|77748206|gb|AAI06333.1| MGC130862 protein [Xenopus laevis]
Length = 306
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/225 (50%), Positives = 148/225 (65%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+ GQHIL N +++SI+ K++I P D VLE+GPGTGN+T+KLLE SK+V A E+D
Sbjct: 21 VLFNTGLGQHILKNPLIVNSIIDKAAIRPTDVVLEVGPGTGNMTMKLLEKSKRVIACELD 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L +R S +L V+ D LKT+ P FDL VAN+PY ISSP V KL+
Sbjct: 81 TRLVAELQKRVQGSAVASKLQVMVGDVLKTDLPFFDLCVANLPYQISSPFVFKLLLHRPF 140
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 141 FRCAVLMFQREFAMRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVV 200
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
I PK P +N EW R F +KNKTL A+FK V ELL
Sbjct: 201 RIEPKNPPPPINFQEWDGLVRIAFVRKNKTLAASFKS-TAVQELL 244
>gi|125774831|ref|XP_001358667.1| GA11224 [Drosophila pseudoobscura pseudoobscura]
gi|195145334|ref|XP_002013651.1| GL24250 [Drosophila persimilis]
gi|54638406|gb|EAL27808.1| GA11224 [Drosophila pseudoobscura pseudoobscura]
gi|194102594|gb|EDW24637.1| GL24250 [Drosophila persimilis]
Length = 306
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 111/225 (49%), Positives = 150/225 (66%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+K GQHIL N V+ +++ K+++ P D VLEIGPGTGN+T+++LE +KKV A EID
Sbjct: 21 IVFNKDFGQHILKNPLVITTMLEKAALRPTDVVLEIGPGTGNMTVRMLEKAKKVIACEID 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+ L +R + +L ++ D LK E P FDL +AN+PY ISSPL+ KL+
Sbjct: 81 TRLAAELQKRVQATPMQPKLQILIGDFLKAELPFFDLCIANVPYQISSPLIFKLLLHRPI 140
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA+RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 141 FRCAVLMFQREFAQRLVAKPGDKLYCRLSINTQLLARVDMLMKVGKNNFRPPPKVESSVV 200
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
+ PK P VN EW TR F +KNKTL ATFK VIE+L
Sbjct: 201 RLEPKNPPPPVNFTEWDGLTRIAFLRKNKTLAATFKV-SSVIEML 244
>gi|340500433|gb|EGR27310.1| hypothetical protein IMG5_198180 [Ichthyophthirius multifiliis]
Length = 354
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 115/216 (53%), Positives = 144/216 (66%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+KS GQHIL N ++L SIV KS+I P D VLEIGPGTGNLT LLE +KKV AIEID R
Sbjct: 13 FNKSFGQHILVNPQILHSIVEKSAIRPTDIVLEIGPGTGNLTSLLLEKAKKVIAIEIDPR 72
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M+ LN+R S + +I DA+ +EFP FD+ VAN PY ISSPLV KL+ FR
Sbjct: 73 MIAELNKRFKYSQHASKFELIQGDAISSEFPFFDVCVANTPYQISSPLVFKLLSHRPIFR 132
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A L+ QKEFA R +A PG + RL+VNV+L++ + ++ V K +F P PKV+SSV+ I
Sbjct: 133 HAILMFQKEFAMRCVAKPGSELYCRLSVNVQLLSRCDHLIKVGKNNFKPPPKVESSVIRI 192
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQK 219
+PK P +N EW R CF +KNK L A FK K
Sbjct: 193 QPKNPAPQINYLEWDGLLRICFMRKNKQLSALFKIK 228
>gi|410923243|ref|XP_003975091.1| PREDICTED: probable dimethyladenosine transferase-like [Takifugu
rubripes]
Length = 306
Score = 220 bits (560), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 107/216 (49%), Positives = 145/216 (67%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+ GQHIL N +++SI+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D
Sbjct: 21 IMFNTGIGQHILKNPLIVNSIIEKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELD 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L +R + ++L ++ D LKT+ P FD+ VAN+PY ISSP V KL+
Sbjct: 81 CRLVAELQKRVQCTPMQNKLQILVGDVLKTDLPFFDICVANLPYQISSPFVFKLLLHRPF 140
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 141 FRCAVLMFQREFAMRLVAPPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVV 200
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P +N EW R F +KNKTLGA FK
Sbjct: 201 RIEPKNPPPPINFQEWDGLVRIAFVRKNKTLGAAFK 236
>gi|116063351|gb|AAI23078.1| LOC779588 protein [Xenopus (Silurana) tropicalis]
Length = 304
Score = 219 bits (559), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 112/225 (49%), Positives = 147/225 (65%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+ GQHIL N +++SI+ K++I P D VLE+GPGTGN+T+KLLE +K+V A E+D
Sbjct: 19 VLFNTGLGQHILKNPLIVNSIIDKAAIRPTDVVLEVGPGTGNMTMKLLEKAKRVVACELD 78
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L +R S +L V+ D LKT+ P FDL VAN+PY ISSP V KL+
Sbjct: 79 TRLVAELQKRVQGSAVASKLQVMVGDVLKTDLPFFDLCVANLPYQISSPFVFKLLLHRPF 138
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 139 FRCAVLMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHIMKVGKNNFRPPPKVESSVV 198
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
I PK P +N EW R F +KNKTL A FK V ELL
Sbjct: 199 RIEPKNPPPPINFQEWDGLVRIAFVRKNKTLAAAFKS-TAVQELL 242
>gi|197246216|gb|AAI69134.1| hypothetical protein LOC779588 [Xenopus (Silurana) tropicalis]
Length = 306
Score = 219 bits (559), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 112/225 (49%), Positives = 147/225 (65%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+ GQHIL N +++SI+ K++I P D VLE+GPGTGN+T+KLLE +K+V A E+D
Sbjct: 21 VLFNTGLGQHILKNPLIVNSIIDKAAIRPTDVVLEVGPGTGNMTMKLLEKAKRVVACELD 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L +R S +L V+ D LKT+ P FDL VAN+PY ISSP V KL+
Sbjct: 81 TRLVAELQKRVQGSAVASKLQVMVGDVLKTDLPFFDLCVANLPYQISSPFVFKLLLHRPF 140
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 141 FRCAVLMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHIMKVGKNNFRPPPKVESSVV 200
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
I PK P +N EW R F +KNKTL A FK V ELL
Sbjct: 201 RIEPKNPPPPINFQEWDGLVRIAFVRKNKTLAAAFKS-TAVQELL 244
>gi|308807092|ref|XP_003080857.1| Ribosomal RNA adenine dimethylase (ISS) [Ostreococcus tauri]
gi|116059318|emb|CAL55025.1| Ribosomal RNA adenine dimethylase (ISS) [Ostreococcus tauri]
Length = 344
Score = 219 bits (559), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 116/226 (51%), Positives = 149/226 (65%), Gaps = 2/226 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F KS GQHIL N ++ +I+ K+ + D VLEIGPGTGNLT KLL+ KKV A+E D
Sbjct: 39 IQFLKSFGQHILKNPAIVTAIIDKAGVKSTDVVLEIGPGTGNLTTKLLDACKKVVAVEFD 98
Query: 62 ERMVEILNRRA-ADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTK 120
RMV L RR D ++ +L +I D LK + P FD+ VAN+PY ISSPL+ KL+
Sbjct: 99 PRMVLELRRRVQGDPVWNSKLEIIQGDFLKVDLPYFDVCVANVPYQISSPLIFKLLAHRP 158
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
FRSATL+ Q+EFA RL+A PGDS + RL+VN +L+A + ++ V K +F P PKVDSSV
Sbjct: 159 MFRSATLMFQREFAMRLVAPPGDSLYCRLSVNTQLLARTQHILKVGKNNFRPPPKVDSSV 218
Query: 181 VIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
V + P+ VN EW R CF +KNKTLG F+ K V+ELL
Sbjct: 219 VRLEPRHPQIPVNFKEWDGLVRFCFGRKNKTLGGIFR-TKNVLELL 263
>gi|312371948|gb|EFR20006.1| hypothetical protein AND_20790 [Anopheles darlingi]
Length = 294
Score = 219 bits (559), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 109/217 (50%), Positives = 145/217 (66%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+K GQHIL N V+ S++ K+++ P D VLEIGPGTGN+T+K+LE KKV A EID
Sbjct: 9 IVFNKDFGQHILKNPLVITSMLEKAALRPTDVVLEIGPGTGNMTVKILEKVKKVVACEID 68
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L +R + +L ++ D LKT+ P FD+ VAN+PY ISSP V KL+
Sbjct: 69 PRLVAELQKRVQGTHLQPKLQILIGDVLKTDLPFFDICVANMPYQISSPFVFKLLLHRPF 128
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA+RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 129 FRCAVLMFQREFAQRLVAKPGDKLYCRLSINTQLLARVDMLMKVGKNNFKPPPKVESSVV 188
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
I P+ P +N EW TR F +KNKTL A FKQ
Sbjct: 189 RIEPRNPPPPINYTEWDGLTRIAFLRKNKTLAAAFKQ 225
>gi|357625687|gb|EHJ76049.1| dimethyladenosine transferase [Danaus plexippus]
Length = 306
Score = 219 bits (558), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 109/217 (50%), Positives = 146/217 (67%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+K GQHIL N ++ S++ K+ + P D LEIGPGTGN+T+K+L+ KKV A EID
Sbjct: 21 IQFNKDFGQHILKNPLIITSMLDKAGLRPTDVALEIGPGTGNMTIKMLDRVKKVIACEID 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L +R + + +L ++ D LKTE P FD+ VANIPY ISSPLV KL+
Sbjct: 81 TRLVAELQKRVQGTPYQAKLQILVGDVLKTELPFFDICVANIPYQISSPLVFKLLLHRPF 140
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA+RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 141 FRCAVLMFQQEFAQRLVAKPGDKLYCRLSINTQLLARVDMLMKVGKNNFRPPPKVESSVV 200
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
I P+ P +N EW TR F +KNKTL A+FKQ
Sbjct: 201 RIEPRNPPPPINFVEWDGLTRIAFVRKNKTLSASFKQ 237
>gi|156393635|ref|XP_001636433.1| predicted protein [Nematostella vectensis]
gi|156223536|gb|EDO44370.1| predicted protein [Nematostella vectensis]
Length = 308
Score = 219 bits (557), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 114/223 (51%), Positives = 146/223 (65%), Gaps = 1/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F GQHIL N V+ S+V K+ + DTVLEIGPGTGNLT+KLLE SKKV A E+D R
Sbjct: 25 FQTEHGQHILKNPLVITSLVDKAGLRSTDTVLEIGPGTGNLTVKLLEQSKKVIACELDPR 84
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
MV L +R + +L+V+ D LKT+ P FD+ VAN+PY ISSP V KL+ FR
Sbjct: 85 MVAELQKRVQGTPLQSKLSVMVGDVLKTDLPFFDVCVANLPYQISSPFVFKLLLHRPFFR 144
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A L+ Q+EFA+RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV I
Sbjct: 145 CAVLMFQREFAQRLIAKPGDKLYCRLSINTQLLARVDHIMKVGKNNFRPPPKVESSVVRI 204
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
PK P VN EW R F +KNKTL A F + V+E+L
Sbjct: 205 EPKNPPPPVNFKEWDGLVRIAFVRKNKTLSACF-NSRPVLEVL 246
>gi|170016041|ref|NP_001116194.1| DIM1 dimethyladenosine transferase 1 homolog [Xenopus (Silurana)
tropicalis]
gi|169641837|gb|AAI60444.1| LOC779588 protein [Xenopus (Silurana) tropicalis]
Length = 306
Score = 219 bits (557), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 112/225 (49%), Positives = 147/225 (65%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+ GQHIL N +++SI+ K++I P D VLE+GPGTGN+T+KLLE +K+V A E+D
Sbjct: 21 VLFNTVLGQHILKNPLIVNSIIDKAAIRPTDVVLEVGPGTGNMTMKLLEKAKRVVACELD 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L +R S +L V+ D LKT+ P FDL VAN+PY ISSP V KL+
Sbjct: 81 TRLVAELQKRVQGSAVASKLQVMVGDVLKTDLPFFDLCVANLPYQISSPFVFKLLLHRPF 140
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 141 FRCAVLMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHIMKVGKNNFRPPPKVESSVV 200
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
I PK P +N EW R F +KNKTL A FK V ELL
Sbjct: 201 RIEPKNPPPPINFQEWDGLVRIAFVRKNKTLAAAFKS-TAVQELL 244
>gi|58385178|ref|XP_313763.2| AGAP004465-PA [Anopheles gambiae str. PEST]
gi|55240843|gb|EAA09266.2| AGAP004465-PA [Anopheles gambiae str. PEST]
Length = 306
Score = 219 bits (557), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 109/217 (50%), Positives = 145/217 (66%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+K GQHIL N V+ S++ K+++ P D VLEIGPGTGN+T+K+LE KKV A EID
Sbjct: 21 IVFNKDFGQHILKNPLVITSMLEKAALRPTDVVLEIGPGTGNMTVKILEKVKKVVACEID 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L +R + +L ++ D LKT+ P FD+ VAN+PY ISSP V KL+
Sbjct: 81 TRLVAELQKRVQGTHMQPKLQILIGDVLKTDLPFFDICVANMPYQISSPFVFKLLLHRPF 140
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA+RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 141 FRCAVLMFQREFAQRLVAKPGDKLYCRLSINTQLLARVDMLMKVGKNNFKPPPKVESSVV 200
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
I P+ P +N EW TR F +KNKTL A FKQ
Sbjct: 201 RIEPRNPPPPINYTEWDGLTRIAFLRKNKTLAAAFKQ 237
>gi|321479018|gb|EFX89974.1| hypothetical protein DAPPUDRAFT_205158 [Daphnia pulex]
Length = 308
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 108/215 (50%), Positives = 145/215 (67%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ S GQHIL N ++++S+V K+++ DTVLEIGPGTGN+T+KLLE SK+V A E+D R
Sbjct: 25 FNTSLGQHILKNPKIVESMVEKAALRSTDTVLEIGPGTGNMTVKLLERSKRVVACEVDPR 84
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
MV L +R + +L+++ D LKTE P FD+ VAN+PY ISSP V KL+ FR
Sbjct: 85 MVAELQKRVLGTHLQPKLHIMVGDVLKTELPFFDVCVANLPYQISSPFVFKLLLHRPMFR 144
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A L+ Q+EFA RL+A PGD + RL+VN +L+A V+ V+ V K +F P PKV+SSVV I
Sbjct: 145 CALLMFQREFAERLIAKPGDKLYCRLSVNTQLLAKVDHVLKVGKNNFRPPPKVESSVVRI 204
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
PK P +N EW R F +KN+T+ A FK
Sbjct: 205 EPKNPAPPINFREWDGLVRIGFLRKNQTMSALFKH 239
>gi|115757168|ref|XP_779962.2| PREDICTED: probable dimethyladenosine transferase-like
[Strongylocentrotus purpuratus]
Length = 292
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 110/225 (48%), Positives = 151/225 (67%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+ GQHIL N V++SI+ K+++ DTVLE+GPGTGN+T+K+L+ +KKV A E+D
Sbjct: 7 ILFNTGIGQHILKNPLVIESIISKAALRSTDTVLEVGPGTGNMTVKMLDKAKKVVACELD 66
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L +R + F +L VI D LKT+ P FD+ VAN+PY ISSP V KL+
Sbjct: 67 PRLVAELQKRVQGTPFAPKLQVIVGDVLKTDLPFFDVCVANLPYQISSPFVFKLLLHRPF 126
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA+RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 127 FRCAVLMFQQEFAQRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFKPPPKVESSVV 186
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
I P+ P +N EW R F +KNKTL A F+ K V+E+L
Sbjct: 187 RIEPRNPPPPINFQEWDGLVRIAFVRKNKTLSAAFRN-KGVVEML 230
>gi|147864926|emb|CAN81538.1| hypothetical protein VITISV_011853 [Vitis vinifera]
Length = 336
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/225 (51%), Positives = 143/225 (63%), Gaps = 15/225 (6%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ FHKSKGQHIL N ++DSIV KS I D +LEIGPGTGNLT KLLE K V A+E+D
Sbjct: 25 VTFHKSKGQHILKNPLLVDSIVEKSGIKSTDVILEIGPGTGNLTKKLLEAGKSVIAVEVD 84
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV L RR + +RL VI D L+ + P FD+ VANIPY ISSPL KL+
Sbjct: 85 PRMVLELQRRFQGTPLSNRLKVIQGDVLRCDLPYFDICVANIPYQISSPLTFKLLAHRPV 144
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A ++ Q+EFA RL+A PGD+ + RL+ V K +F P PKVDSSVV
Sbjct: 145 FRCAVIMFQREFAMRLVAQPGDNLYCRLS--------------VGKNNFRPPPKVDSSVV 190
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
I P+ +P VN EW R CF++KNKTLG+ F+Q K V+ LL
Sbjct: 191 RIEPRKPLPPVNFKEWDGLVRLCFNRKNKTLGSIFRQ-KSVLSLL 234
>gi|291395424|ref|XP_002714103.1| PREDICTED: dimethyladenosine transferase [Oryctolagus cuniculus]
Length = 308
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/216 (50%), Positives = 144/216 (66%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+K GQHIL N V++SI+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D
Sbjct: 23 LVFNKGIGQHILKNPLVVNSIIEKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVIACELD 82
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L++R + +L V+ D LKTE P FD VAN+PY ISSP V KL+
Sbjct: 83 PRLVAELHKRVQGTPLASKLQVMVGDVLKTELPFFDTCVANLPYQISSPFVFKLLLHRPF 142
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 143 FRCAVLMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVV 202
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P +N EW R F +KNKTL A FK
Sbjct: 203 RIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFK 238
>gi|195036390|ref|XP_001989653.1| GH18676 [Drosophila grimshawi]
gi|193893849|gb|EDV92715.1| GH18676 [Drosophila grimshawi]
Length = 306
Score = 216 bits (551), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 111/225 (49%), Positives = 149/225 (66%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+K GQHIL N V+ +++ K+++ D VLEIGPGTGN+T+++LE +KKV A EID
Sbjct: 21 IVFNKDFGQHILKNPLVITTMLEKAALRATDVVLEIGPGTGNMTVRMLERAKKVIACEID 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+ L +R + +L V+ D LK E P FDL +AN+PY ISSPL+ KL+
Sbjct: 81 TRLAAELQKRVQATPLQPKLQVLIGDFLKAELPFFDLCIANVPYQISSPLIFKLLLHRPL 140
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA+RL+A PGD + RL+VN +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 141 FRCAVLMFQREFAQRLVAKPGDKLYCRLSVNTQLLARVDMLMKVGKNNFKPPPKVESSVV 200
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
+ PK P VN EW TR F +KNKTL ATFK V+E+L
Sbjct: 201 RLEPKNPPPPVNFTEWDGLTRIAFLRKNKTLAATFKV-NSVMEML 244
>gi|213511764|ref|NP_001135031.1| Probable dimethyladenosine transferase [Salmo salar]
gi|209738164|gb|ACI69951.1| Probable dimethyladenosine transferase [Salmo salar]
Length = 306
Score = 216 bits (550), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 107/216 (49%), Positives = 142/216 (65%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+ GQHIL N V++ I+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D
Sbjct: 21 VMFNTGLGQHILKNPLVVNGIIEKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELD 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L +R + +L ++ D LKTE P FD+ VAN+PY ISSP V KL+
Sbjct: 81 GRLVAELQKRVQCTPMQTKLQILVGDVLKTELPFFDVCVANLPYQISSPFVFKLLLHRPF 140
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 141 FRCAVLMFQREFAMRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVV 200
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P VN EW R F +KNKTL A FK
Sbjct: 201 RIEPKNPPPPVNFQEWDGLVRIAFVRKNKTLNAGFK 236
>gi|259089147|ref|NP_001158611.1| Probable dimethyladenosine transferase [Oncorhynchus mykiss]
gi|225705252|gb|ACO08472.1| Probable dimethyladenosine transferase [Oncorhynchus mykiss]
Length = 306
Score = 216 bits (550), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 107/216 (49%), Positives = 142/216 (65%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+ GQHIL N V++ I+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D
Sbjct: 21 VMFNTGLGQHILKNPLVVNGIIEKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELD 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L +R + +L ++ D LKTE P FD+ VAN+PY ISSP V KL+
Sbjct: 81 GRLVAELQKRVQCTPMQTKLQILVGDVLKTELPFFDVCVANLPYQISSPFVFKLLLHRPF 140
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 141 FRCAVLMFQREFAMRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVV 200
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P VN EW R F +KNKTL A FK
Sbjct: 201 RIEPKNPPPPVNFQEWDGLVRIAFVRKNKTLNAGFK 236
>gi|195394465|ref|XP_002055863.1| GJ10534 [Drosophila virilis]
gi|194142572|gb|EDW58975.1| GJ10534 [Drosophila virilis]
Length = 306
Score = 216 bits (549), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 110/225 (48%), Positives = 149/225 (66%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+K GQHIL N V+ +++ K+++ D VLEIGPGTGN+T+++LE +KKV A EID
Sbjct: 21 IVFNKDFGQHILKNPLVITTMLEKAALRATDVVLEIGPGTGNMTVRMLERAKKVIACEID 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+ L +R + +L V+ D LK + P FDL +AN+PY ISSPL+ KL+
Sbjct: 81 TRLAAELQKRVQATPLQPKLQVLIGDFLKADLPFFDLCIANVPYQISSPLIFKLLLHRPL 140
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA+RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 141 FRCAVLMFQREFAQRLVAKPGDKLYCRLSINTQLLARVDMLMKVGKNNFKPPPKVESSVV 200
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
+ PK P VN EW TR F +KNKTL ATFK VIE+L
Sbjct: 201 RLEPKNPPPPVNFTEWDGLTRIAFLRKNKTLAATFKV-NSVIEML 244
>gi|432874396|ref|XP_004072476.1| PREDICTED: probable dimethyladenosine transferase-like [Oryzias
latipes]
Length = 306
Score = 216 bits (549), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 107/216 (49%), Positives = 142/216 (65%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+ GQHIL N V++ I+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D
Sbjct: 21 IVFNTGIGQHILKNPLVVNGIIEKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELD 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L +R + +L ++ D LKT+ P FD+ VAN+PY ISSP V KL+
Sbjct: 81 TRLVAELQKRVQCTPMQAKLQILIGDVLKTDLPFFDVCVANLPYQISSPFVFKLLLHRPF 140
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 141 FRCAVLMFQREFAMRLVAKPGDKLYCRLSINTQLLAQVDHLMKVGKNNFRPPPKVESSVV 200
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P VN EW R F +KNKTL A FK
Sbjct: 201 RIEPKNPPPPVNFQEWDGLVRIAFVRKNKTLNAAFK 236
>gi|196010894|ref|XP_002115311.1| hypothetical protein TRIADDRAFT_29342 [Trichoplax adhaerens]
gi|190582082|gb|EDV22156.1| hypothetical protein TRIADDRAFT_29342 [Trichoplax adhaerens]
Length = 280
Score = 215 bits (548), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 107/211 (50%), Positives = 144/211 (68%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQHIL N +++SIV K++I DTVLEIGPGTGNLT+KLL+ +KKV A E+D R+ L
Sbjct: 2 GQHILKNPLIVNSIVEKAAIRSTDTVLEIGPGTGNLTVKLLQKAKKVIACEVDPRLAAEL 61
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
+R S +L++I D LKTE P FD+ VAN+PY ISSP V KL+ FR A L+
Sbjct: 62 QKRVQGSPVSTKLHIIVGDVLKTELPYFDVCVANLPYQISSPFVFKLLLHRPLFRCAVLM 121
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q+EFA RL+A PGD + RL++N +L+A V+ ++ V K +F P PKV+SSVV I P
Sbjct: 122 FQREFALRLVAKPGDKLYCRLSINTQLLAKVDHLIKVGKNNFRPPPKVESSVVRIEPINP 181
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFKQK 219
+P +N EW TR F++KN+TL A+FK +
Sbjct: 182 VPPINFKEWDGLTRIVFARKNRTLSASFKTQ 212
>gi|195341093|ref|XP_002037146.1| GM12757 [Drosophila sechellia]
gi|194131262|gb|EDW53305.1| GM12757 [Drosophila sechellia]
Length = 306
Score = 215 bits (548), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 110/225 (48%), Positives = 149/225 (66%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+K GQHIL N V+ +++ K+++ D VLEIGPGTGN+T+++LE +KKV A EID
Sbjct: 21 IVFNKDFGQHILKNPLVITTMLEKAALRATDVVLEIGPGTGNMTVRMLERAKKVIACEID 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+ L +R + +L+V+ D LK E P FDL +AN+PY ISSPL+ KL+
Sbjct: 81 TRLAAELQKRVQATPLQPKLHVLIGDFLKAELPFFDLCIANVPYQISSPLIFKLLLHRPL 140
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 141 FRCAVLMFQREFAERLVAKPGDKLYCRLSINTQLLARVDMLMKVGKNNFRPPPKVESSVV 200
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
+ PK P VN EW TR F +KNKTL ATFK V+E+L
Sbjct: 201 RLEPKNPPPPVNFTEWDGLTRIAFLRKNKTLAATFKV-TSVLEML 244
>gi|194906638|ref|XP_001981404.1| GG11635 [Drosophila erecta]
gi|190656042|gb|EDV53274.1| GG11635 [Drosophila erecta]
Length = 306
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 110/225 (48%), Positives = 148/225 (65%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+K GQHIL N V+ +++ K+++ D VLEIGPGTGN+T+++LE +KKV A EID
Sbjct: 21 IVFNKDFGQHILKNPLVITTMLEKAALRATDVVLEIGPGTGNMTVRMLERAKKVIACEID 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+ L +R + +L V+ D LK E P FDL +AN+PY ISSPL+ KL+
Sbjct: 81 TRLAAELQKRVQATPLQPKLQVLIGDFLKAELPFFDLCIANVPYQISSPLIFKLLLHRPL 140
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 141 FRCAVLMFQREFAERLVAKPGDKLYCRLSINTQLLARVDMLMKVGKNNFKPPPKVESSVV 200
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
+ PK P VN EW TR F +KNKTL ATFK V+E+L
Sbjct: 201 RLEPKNPPPPVNFTEWDGLTRIAFLRKNKTLAATFKV-TSVLEML 244
>gi|21358017|ref|NP_651660.1| CG11837 [Drosophila melanogaster]
gi|195574637|ref|XP_002105291.1| GD21406 [Drosophila simulans]
gi|27151493|sp|Q9VAQ5.1|DIM1_DROME RecName: Full=Probable dimethyladenosine transferase; AltName:
Full=Probable 18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=Probable 18S rRNA
dimethylase; AltName: Full=Probable
S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|7301735|gb|AAF56847.1| CG11837 [Drosophila melanogaster]
gi|16769516|gb|AAL28977.1| LD35950p [Drosophila melanogaster]
gi|194201218|gb|EDX14794.1| GD21406 [Drosophila simulans]
gi|220944428|gb|ACL84757.1| CG11837-PA [synthetic construct]
gi|220954304|gb|ACL89695.1| CG11837-PA [synthetic construct]
Length = 306
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 110/225 (48%), Positives = 148/225 (65%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+K GQHIL N V+ +++ K+++ D VLEIGPGTGN+T+++LE +KKV A EID
Sbjct: 21 IVFNKDFGQHILKNPLVITTMLEKAALRATDVVLEIGPGTGNMTVRMLERAKKVIACEID 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+ L +R + +L V+ D LK E P FDL +AN+PY ISSPL+ KL+
Sbjct: 81 TRLAAELQKRVQATPLQPKLQVLIGDFLKAELPFFDLCIANVPYQISSPLIFKLLLHRPL 140
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 141 FRCAVLMFQREFAERLVAKPGDKLYCRLSINTQLLARVDMLMKVGKNNFRPPPKVESSVV 200
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
+ PK P VN EW TR F +KNKTL ATFK V+E+L
Sbjct: 201 RLEPKNPPPPVNFTEWDGLTRIAFLRKNKTLAATFKV-TSVLEML 244
>gi|195503410|ref|XP_002098640.1| GE23825 [Drosophila yakuba]
gi|194184741|gb|EDW98352.1| GE23825 [Drosophila yakuba]
Length = 306
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 111/225 (49%), Positives = 147/225 (65%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+K GQHIL N V+ S++ K+++ D VLEIGPGTGN+T+ +LE +KKV A EID
Sbjct: 21 IVFNKDFGQHILKNPLVITSMLEKAALRATDVVLEIGPGTGNMTVPMLERAKKVIACEID 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+ L +R + +L V+ D LK E P FDL +AN+PY ISSPL+ KL+
Sbjct: 81 TRLAAELQKRVQATPLQPKLQVLIGDFLKAELPFFDLCIANVPYQISSPLIFKLLLHRPL 140
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 141 FRCAVLMFQREFAERLVAKPGDKLYCRLSINTQLLARVDMLMKVGKNNFRPPPKVESSVV 200
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
+ PK P VN EW TR F +KNKTL ATFK V+E+L
Sbjct: 201 RLEPKNPPPPVNFTEWDGLTRIAFLRKNKTLAATFKV-TSVLEML 244
>gi|167533147|ref|XP_001748254.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773374|gb|EDQ87015.1| predicted protein [Monosiga brevicollis MX1]
Length = 345
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 111/225 (49%), Positives = 149/225 (66%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+K GQHIL N V+ I+ K++I DTVLEIGPGTGNLT+KLLE KKV A E+D
Sbjct: 35 IVFNKDFGQHILKNPLVVQGIIDKAAIKSTDTVLEIGPGTGNLTVKLLEKGKKVVACEVD 94
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+ L +R + H +L+++ D LK + P FD+ VAN+PY ISSP V K++
Sbjct: 95 PRLAAELQKRVMGTPLHRKLHLVMGDVLKADLPFFDVCVANMPYQISSPFVFKILLHRPL 154
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA+RL+A PGD+ + RL+VN +L+A V+ VM V + +F P PKV+SSVV
Sbjct: 155 FRCAVLMFQREFAQRLVAKPGDALYCRLSVNTQLLARVDHVMKVGRNNFRPPPKVESSVV 214
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
I P+ P V+ +EW R F +KNKTL A F K V++LL
Sbjct: 215 RIEPRNPPPPVDFEEWDGLLRIAFIRKNKTLAACF-HSKSVLKLL 258
>gi|348528444|ref|XP_003451727.1| PREDICTED: probable dimethyladenosine transferase-like [Oreochromis
niloticus]
Length = 306
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/216 (49%), Positives = 142/216 (65%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+ GQHIL N V++ I+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D
Sbjct: 21 IMFNTGIGQHILKNPLVVNGIIEKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELD 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L +R + +L ++ D LKT+ P FD+ VAN+PY ISSP V KL+
Sbjct: 81 CRLVAELQKRVQCTPLQAKLQILIGDVLKTDLPFFDVCVANLPYQISSPFVFKLLLHRPF 140
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 141 FRCAVLMFQREFAMRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVV 200
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P VN EW R F +KNKTL A FK
Sbjct: 201 RIEPKNPPPPVNFQEWDGLVRIAFVRKNKTLNAAFK 236
>gi|281204745|gb|EFA78940.1| dimethyladenosine transferase [Polysphondylium pallidum PN500]
Length = 306
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 116/223 (52%), Positives = 150/223 (67%), Gaps = 1/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
+K+ GQH+L N ++D+IV KS + DTVLEIGPGTGNLT+KLLE KKV A+E+D R
Sbjct: 32 MNKTFGQHLLKNPLIIDAIVDKSQLKSTDTVLEIGPGTGNLTMKLLESCKKVIAVEVDPR 91
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R A + + L +I D LK + P FD+ VAN+PY ISSPL KL+ FR
Sbjct: 92 MAAELQKRVATTPYASHLEIILGDFLKVDLPYFDVCVANVPYQISSPLTFKLLAHRPVFR 151
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+A L+ QKEFA RL ASPGDS + RL+VN +L++ V +M V K +FLP PKV+S+VV I
Sbjct: 152 TAVLMFQKEFALRLAASPGDSLYCRLSVNTQLLSKVTHLMKVGKNNFLPPPKVESAVVKI 211
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
+P P +N EW + CFS+KNKTL A FK VIE+L
Sbjct: 212 QPFNPPPPINFIEWDGLIKLCFSRKNKTLPAIFKV-NSVIEML 253
>gi|157103251|ref|XP_001647892.1| dimethyladenosine transferase [Aedes aegypti]
gi|157126646|ref|XP_001654689.1| dimethyladenosine transferase [Aedes aegypti]
gi|108873212|gb|EAT37437.1| AAEL010575-PA [Aedes aegypti]
gi|108884724|gb|EAT48949.1| AAEL000076-PA [Aedes aegypti]
Length = 306
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 109/217 (50%), Positives = 141/217 (64%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+K GQHIL N ++ S++ K+ + P D VLEIGPGTGN+T+KLLE KKV A EID
Sbjct: 21 IVFNKDFGQHILKNPLIVTSMLDKAGLRPTDVVLEIGPGTGNMTVKLLEKVKKVVACEID 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L +R + +L ++ D LK + P FD VAN+PY ISSP V KL+
Sbjct: 81 PRLVAELQKRVQGTPMQSKLQILIGDVLKADLPFFDCCVANMPYQISSPFVFKLLLHRPF 140
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q EFA+RL+A PGD + RL+VN +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 141 FRCAVLMFQLEFAQRLVAKPGDKLYCRLSVNTQLLARVDMLMKVGKNNFRPPPKVESSVV 200
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
I P+ P +N EW TR F +KNKTL A FKQ
Sbjct: 201 RIEPRNPSPPINYTEWDGLTRIAFLRKNKTLAAAFKQ 237
>gi|340377024|ref|XP_003387030.1| PREDICTED: probable dimethyladenosine transferase-like [Amphimedon
queenslandica]
Length = 307
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/223 (49%), Positives = 147/223 (65%), Gaps = 1/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K KGQHIL N ++ SIV K+ +NP DTVLE+GPGTGN+T+KLL+ +KKV A E+D R
Sbjct: 2 FEKGKGQHILKNPLIISSIVEKAGLNPSDTVLEVGPGTGNMTVKLLDAAKKVIACEVDTR 61
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
+V L +R + +L V+ D L + P F + VAN+PY ISSP V KL+ FR
Sbjct: 62 LVAELQKRVQGTPQASKLQVLVGDVLSRDLPFFSVCVANLPYQISSPFVFKLLLHRPLFR 121
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A L+ Q+EFA+RL+A P D + RL+VNV+L+A V +M V K +F P P+V+SSVV I
Sbjct: 122 CAVLMFQQEFAQRLVAKPSDKLYCRLSVNVQLLARVTHLMKVGKNNFKPPPQVESSVVRI 181
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
P P +N EW + F +KN++L ATFK KKV+ELL
Sbjct: 182 EPFNPPPPINYQEWDGLIQIAFQRKNRSLSATFKN-KKVLELL 223
>gi|346716185|ref|NP_001231242.1| probable dimethyladenosine transferase [Sus scrofa]
Length = 313
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/216 (49%), Positives = 143/216 (66%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+ GQHIL N +++SI+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D
Sbjct: 28 LMFNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVIACELD 87
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L++R + RL V+ D LKT+ P FD VAN+PY ISSP V KL+
Sbjct: 88 PRLVAELHKRVQGTPLASRLQVMVGDVLKTDLPFFDACVANLPYQISSPFVFKLLLHRPF 147
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 148 FRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVV 207
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P +N EW R F +KNKTL A FK
Sbjct: 208 RIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFK 243
>gi|225704090|gb|ACO07891.1| Probable dimethyladenosine transferase [Oncorhynchus mykiss]
Length = 306
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 141/216 (65%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+ GQHIL N V++ I+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D
Sbjct: 21 VMFNTGLGQHILKNPLVVNGIIEKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELD 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L +R + +L ++ D LKTE P FD+ V N+PY ISSP V KL+
Sbjct: 81 GRLVAELQKRVQCTPMQTKLQILVGDVLKTELPFFDVCVTNLPYQISSPFVFKLLLHRPF 140
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 141 FRCAVLMFQREFAMRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVV 200
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P VN EW R F +KNKTL A FK
Sbjct: 201 RIEPKNPPPPVNFQEWDGLVRIAFVRKNKTLNAGFK 236
>gi|195108513|ref|XP_001998837.1| GI24187 [Drosophila mojavensis]
gi|193915431|gb|EDW14298.1| GI24187 [Drosophila mojavensis]
Length = 306
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/225 (48%), Positives = 149/225 (66%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+K GQHIL N V+ +++ K+++ D VLEIGPGTGN+T+++LE +KKV A EID
Sbjct: 21 IVFNKDFGQHILKNPLVITTMLEKAALRATDVVLEIGPGTGNMTVRMLERAKKVIACEID 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+ L +R + +L V+ D LK + P FDL +AN+PY ISSPL+ KL+
Sbjct: 81 TRLAAELQKRVQGTPMQPKLQVLIGDFLKADLPFFDLCIANVPYQISSPLIFKLLLHRPL 140
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA+RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 141 FRCAVLMFQREFAQRLVAKPGDKLYCRLSINTQLLARVDMLMKVGKNNFKPPPKVESSVV 200
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
+ PK P +N EW TR F +KNKTL ATFK V+E+L
Sbjct: 201 RLEPKNPPPPINFTEWDGLTRIAFLRKNKTLAATFKV-NSVMEML 244
>gi|12803983|gb|AAH02841.1| DIMT1L protein [Homo sapiens]
Length = 275
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 143/216 (66%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+ GQHIL N +++SI+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D
Sbjct: 28 LMFNTGIGQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELD 87
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L++R + +L V+ D LKT+ P FD VAN+PY ISSP V KL+
Sbjct: 88 PRLVAELHKRVQGTPVASKLQVLVGDVLKTDLPFFDTCVANLPYQISSPFVFKLLLHRPF 147
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 148 FRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVV 207
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P +N EW R F +KNKTL A FK
Sbjct: 208 RIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFK 243
>gi|170058055|ref|XP_001864755.1| dimethyladenosine transferase [Culex quinquefasciatus]
gi|167877296|gb|EDS40679.1| dimethyladenosine transferase [Culex quinquefasciatus]
Length = 306
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 107/217 (49%), Positives = 142/217 (65%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+K GQHIL N ++ S++ K+++ P D VLEIGPGTGN+T+K+LE KKV A EID
Sbjct: 21 IVFNKDFGQHILKNPLIVTSMLEKAALRPTDVVLEIGPGTGNMTVKILEKVKKVIACEID 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L +R + +L ++ D LK + P FD VAN+PY ISSP V KL+
Sbjct: 81 PRLVAELQKRVQGTPMQSKLQILIGDVLKADLPFFDCCVANMPYQISSPFVFKLLLHRPF 140
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q EFA+RL+A PGD + RL+VN +L+A V+ +M + K +F P PKV+SSVV
Sbjct: 141 FRCAVLMFQLEFAQRLVAKPGDKLYCRLSVNTQLLARVDMLMKIGKNNFRPPPKVESSVV 200
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
I P+ P +N EW TR F +KNKTL A FKQ
Sbjct: 201 RIEPRNPPPPINYTEWDGLTRIAFLRKNKTLSAAFKQ 237
>gi|326433493|gb|EGD79063.1| dimethyladenosine transferase [Salpingoeca sp. ATCC 50818]
Length = 310
Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 110/230 (47%), Positives = 154/230 (66%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+K GQHIL N V+ I+ K++I DTVLEIGPGTGNLT+KLLE + K+ A E+D
Sbjct: 28 VLFNKDFGQHILKNPLVVTGIIDKANIRSSDTVLEIGPGTGNLTIKLLEKAGKLIAYEVD 87
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+ + L +R + + + +L+++ DA+K P FD+ VAN+PY ISSP V K++
Sbjct: 88 SRLADELVKRVSKTMYKSKLHLVLGDAIKNPLPAFDVCVANMPYQISSPFVFKILKHRPL 147
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PG+ + RL+VN +L++++E VM VSK +F P PKV+SSVV
Sbjct: 148 FRCAVLMFQREFALRLVAKPGEEHYCRLSVNAQLLSNIEHVMKVSKNNFRPPPKVESSVV 207
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLSKQ 231
I P PDV+L E+ R F +KN+TL A FK+K V LL+ KQ
Sbjct: 208 RIVPHRPAPDVDLSEFDGLLRIAFERKNRTLAAAFKKKGVVALLLQNFKQ 257
>gi|119571771|gb|EAW51386.1| dimethyladenosine transferase, isoform CRA_c [Homo sapiens]
Length = 266
Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 143/216 (66%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+ GQHIL N +++SI+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D
Sbjct: 28 LMFNTGIGQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELD 87
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L++R + +L V+ D LKT+ P FD VAN+PY ISSP V KL+
Sbjct: 88 PRLVAELHKRVQGTPVASKLQVLVGDVLKTDLPFFDTCVANLPYQISSPFVFKLLLHRPF 147
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 148 FRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVV 207
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P +N EW R F +KNKTL A FK
Sbjct: 208 RIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFK 243
>gi|281348842|gb|EFB24426.1| hypothetical protein PANDA_004390 [Ailuropoda melanoleuca]
Length = 298
Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 143/216 (66%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+ GQHIL N +++SI+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D
Sbjct: 26 LMFNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVIACELD 85
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L++R + +L V+ D LKT+ P FD VAN+PY ISSP V KL+
Sbjct: 86 PRLVAELHKRVQGTPLASKLQVLVGDVLKTDLPFFDACVANLPYQISSPFVFKLLLHRPF 145
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 146 FRCAVLMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVV 205
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P +N EW R F +KNKTL A FK
Sbjct: 206 RIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFK 241
>gi|194388854|dbj|BAG61444.1| unnamed protein product [Homo sapiens]
Length = 243
Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 143/216 (66%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+ GQHIL N +++SI+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D
Sbjct: 28 LMFNTGIGQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELD 87
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L++R + +L V+ D LKT+ P FD VAN+PY ISSP V KL+
Sbjct: 88 PRLVAELHKRVQGTPVASKLQVLVGDVLKTDLPFFDTCVANLPYQISSPFVFKLLLHRPF 147
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 148 FRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVV 207
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P +N EW R F +KNKTL A FK
Sbjct: 208 RIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFK 243
>gi|57525891|ref|NP_001003556.1| probable dimethyladenosine transferase [Danio rerio]
gi|50417873|gb|AAH78286.1| Zgc:101122 [Danio rerio]
Length = 306
Score = 213 bits (543), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 141/216 (65%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+ GQHIL N V++ I+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D
Sbjct: 21 IMFNTGIGQHILKNPLVVNGIIEKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELD 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L +R + ++L ++ D LKTE P FD+ VAN+PY ISSP V KL+
Sbjct: 81 ARLVAELQKRVQCTPMQNKLQILIGDVLKTELPFFDVCVANLPYQISSPFVFKLLLHRPF 140
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ + V K +F P PKV+SSVV
Sbjct: 141 FRCAVLMFQREFAMRLVAKPGDKLYCRLSINTQLLARVDHLTKVGKNNFRPPPKVESSVV 200
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P VN EW R F +KNK L A FK
Sbjct: 201 RIEPKNPPPPVNFQEWDGLVRIAFVRKNKMLSAAFK 236
>gi|301761816|ref|XP_002916330.1| PREDICTED: probable dimethyladenosine transferase-like [Ailuropoda
melanoleuca]
Length = 313
Score = 213 bits (543), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 143/216 (66%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+ GQHIL N +++SI+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D
Sbjct: 28 LMFNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVIACELD 87
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L++R + +L V+ D LKT+ P FD VAN+PY ISSP V KL+
Sbjct: 88 PRLVAELHKRVQGTPLASKLQVLVGDVLKTDLPFFDACVANLPYQISSPFVFKLLLHRPF 147
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 148 FRCAVLMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVV 207
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P +N EW R F +KNKTL A FK
Sbjct: 208 RIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFK 243
>gi|355344072|gb|AER59665.1| dimethyladenosine transferase 1-like protein [Capra hircus]
Length = 313
Score = 213 bits (543), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 143/216 (66%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+ GQHIL N +++SI+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D
Sbjct: 28 LMFNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVIACELD 87
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L++R + +L V+ D LKT+ P FD VAN+PY ISSP V KL+
Sbjct: 88 PRLVAELHKRVQGTPLASKLQVMVGDVLKTDLPFFDACVANLPYQISSPFVFKLLLHRPF 147
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 148 FRCAVLMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVV 207
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P +N EW R F +KNKTL A FK
Sbjct: 208 RIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFK 243
>gi|225717294|gb|ACO14493.1| Probable dimethyladenosine transferase [Esox lucius]
Length = 306
Score = 213 bits (543), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 141/216 (65%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+ GQHIL N V++ I+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A +D
Sbjct: 21 VMFNTGLGQHILKNPLVVNGIIEKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACGLD 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L +R + +L ++ D LKTE P FD+ VAN+PY ISSP V KL+
Sbjct: 81 GRLVAELQKRVQCTPMQAKLQILVGDVLKTELPFFDVCVANLPYQISSPFVFKLLLHRPF 140
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 141 FRCAVLMFQREFAMRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVV 200
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P VN EW R F +KNKTL A FK
Sbjct: 201 RIEPKNPPPPVNFQEWDGLVRIAFVRKNKTLNAGFK 236
>gi|395818753|ref|XP_003782781.1| PREDICTED: probable dimethyladenosine transferase [Otolemur
garnettii]
Length = 313
Score = 213 bits (542), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 143/216 (66%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+ GQHIL N +++SI+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D
Sbjct: 28 LMFNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELD 87
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L++R + +L V+ D LKT+ P FD VAN+PY ISSP V KL+
Sbjct: 88 PRLVAELHKRVQGTPLASKLQVMVGDVLKTDLPFFDACVANLPYQISSPFVFKLLLHRPF 147
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 148 FRCAVLMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVV 207
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P +N EW R F +KNKTL A FK
Sbjct: 208 RIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFK 243
>gi|149732873|ref|XP_001493943.1| PREDICTED: probable dimethyladenosine transferase-like [Equus
caballus]
Length = 313
Score = 213 bits (542), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 143/216 (66%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+ GQHIL N +++SI+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D
Sbjct: 28 LMFNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVIACELD 87
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L++R + +L V+ D LKT+ P FD VAN+PY ISSP V KL+
Sbjct: 88 PRLVAELHKRVQGTPLAGKLQVMVGDVLKTDLPFFDACVANLPYQISSPFVFKLLLHRPF 147
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 148 FRCAVLMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVV 207
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P +N EW R F +KNKTL A FK
Sbjct: 208 RIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFK 243
>gi|355683951|gb|AER97244.1| DIM1 dimethyladenosine transferase 1-like protein [Mustela putorius
furo]
Length = 298
Score = 213 bits (542), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 143/216 (66%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+ GQHIL N +++SI+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D
Sbjct: 28 LMFNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELD 87
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L++R + +L V+ D LKT+ P FD VAN+PY ISSP V KL+
Sbjct: 88 PRLVAELHKRVQGTPLASKLQVLVGDVLKTDLPFFDACVANLPYQISSPFVFKLLLHRPF 147
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 148 FRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVV 207
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P +N EW R F +KNKTL A FK
Sbjct: 208 RIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFK 243
>gi|403267484|ref|XP_003925860.1| PREDICTED: probable dimethyladenosine transferase [Saimiri
boliviensis boliviensis]
Length = 313
Score = 213 bits (542), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 143/216 (66%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+ GQHIL N +++SI+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D
Sbjct: 28 LMFNTGIGQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELD 87
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L++R + +L V+ D LKT+ P FD VAN+PY ISSP V KL+
Sbjct: 88 PRLVAELHKRVQGTPMASKLQVLVGDVLKTDLPFFDACVANLPYQISSPFVFKLLLHRPF 147
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 148 FRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVV 207
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P +N EW R F +KNKTL A FK
Sbjct: 208 RIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFK 243
>gi|289740727|gb|ADD19111.1| ribosomal RNA adenine dimethylase [Glossina morsitans morsitans]
Length = 306
Score = 213 bits (542), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 109/225 (48%), Positives = 147/225 (65%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+K GQHIL N V+ S++ K++I D +LEIGPGTGN+T+++LE KKV A EID
Sbjct: 21 ILFNKEFGQHILKNPLVITSMLEKAAIRSTDVILEIGPGTGNMTVRMLERCKKVIACEID 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+ L +R + +L ++ D LK + P FDL +ANIPY ISSPL+ KL+
Sbjct: 81 TRLAAELQKRVQATPMQYKLQILIGDFLKADLPFFDLCIANIPYQISSPLIFKLLLHRPL 140
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA+RL+A PG+ + RL+VN +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 141 FRCAVLMFQREFAQRLVAKPGEKLYCRLSVNTQLLARVDMLMKVGKNNFKPPPKVESSVV 200
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
+ PK P VN EW TR F +KNKTL A FK V+E+L
Sbjct: 201 RLEPKNPPPPVNFTEWDGLTRVAFLRKNKTLAAAFK-INSVLEML 244
>gi|320166025|gb|EFW42924.1| dimethyladenosine transferase [Capsaspora owczarzaki ATCC 30864]
Length = 313
Score = 213 bits (542), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 109/225 (48%), Positives = 145/225 (64%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F KS GQHIL N +++ I+ K+ + DTVLEIGPGTGNLT+KLLE SKKV A E+D
Sbjct: 28 IQFDKSFGQHILKNPLIVNGIIEKAGLRNTDTVLEIGPGTGNLTMKLLEASKKVVACEVD 87
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L +R + + L ++ D LK + P FD+ VAN+PY ISSP V KL+
Sbjct: 88 VRLVAELQKRVMGTPYQRNLEILVGDVLKADLPFFDVCVANMPYQISSPFVFKLLLHRPF 147
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ QKEFA+RL A PGD + RL+VN +L+A V+ +M V + +F P P+V+S+VV
Sbjct: 148 FRCAVLMFQKEFAQRLYAKPGDPAYCRLSVNTQLLARVDHLMKVGRNNFRPPPQVESAVV 207
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
I P+ P +N EW R F +KNKTL A F V+E+L
Sbjct: 208 RIEPRNPPPPINFQEWDGLVRITFVRKNKTLHAAF-MSSAVLEML 251
>gi|297675337|ref|XP_002815639.1| PREDICTED: probable dimethyladenosine transferase isoform 1 [Pongo
abelii]
Length = 313
Score = 213 bits (542), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 143/216 (66%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+ GQHIL N +++SI+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D
Sbjct: 28 LMFNTGIGQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELD 87
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L++R + +L V+ D LKT+ P FD VAN+PY ISSP V KL+
Sbjct: 88 PRLVAELHKRVQGTPVASKLQVLVGDVLKTDLPFFDTCVANLPYQISSPFVFKLLLHRPF 147
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 148 FRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVV 207
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P +N EW R F +KNKTL A FK
Sbjct: 208 RIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFK 243
>gi|7657198|ref|NP_055288.1| probable dimethyladenosine transferase [Homo sapiens]
gi|114600097|ref|XP_517743.2| PREDICTED: probable dimethyladenosine transferase isoform 3 [Pan
troglodytes]
gi|397514383|ref|XP_003827467.1| PREDICTED: probable dimethyladenosine transferase [Pan paniscus]
gi|402871644|ref|XP_003899764.1| PREDICTED: probable dimethyladenosine transferase [Papio anubis]
gi|27151492|sp|Q9UNQ2.1|DIM1_HUMAN RecName: Full=Probable dimethyladenosine transferase; AltName:
Full=DIM1 dimethyladenosine transferase 1 homolog;
AltName: Full=DIM1 dimethyladenosine transferase 1-like;
AltName: Full=Probable 18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=Probable 18S rRNA
dimethylase; AltName: Full=Probable
S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|4050050|gb|AAC97955.1| putative dimethyladenosine transferase [Homo sapiens]
gi|14790071|gb|AAH10874.1| DIM1 dimethyladenosine transferase 1-like (S. cerevisiae) [Homo
sapiens]
gi|119571770|gb|EAW51385.1| dimethyladenosine transferase, isoform CRA_b [Homo sapiens]
gi|123981158|gb|ABM82408.1| dimethyladenosine transferase [synthetic construct]
gi|123995987|gb|ABM85595.1| dimethyladenosine transferase [synthetic construct]
gi|123996331|gb|ABM85767.1| dimethyladenosine transferase [synthetic construct]
gi|307684642|dbj|BAJ20361.1| DIM1 dimethyladenosine transferase 1-like [synthetic construct]
gi|355691339|gb|EHH26524.1| Putative dimethyladenosine transferase [Macaca mulatta]
gi|355759449|gb|EHH61619.1| Putative dimethyladenosine transferase [Macaca fascicularis]
gi|410208796|gb|JAA01617.1| DIM1 dimethyladenosine transferase 1-like [Pan troglodytes]
gi|410257122|gb|JAA16528.1| DIM1 dimethyladenosine transferase 1-like [Pan troglodytes]
gi|410299232|gb|JAA28216.1| DIM1 dimethyladenosine transferase 1-like [Pan troglodytes]
gi|410338827|gb|JAA38360.1| DIM1 dimethyladenosine transferase 1-like [Pan troglodytes]
Length = 313
Score = 213 bits (541), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 143/216 (66%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+ GQHIL N +++SI+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D
Sbjct: 28 LMFNTGIGQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELD 87
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L++R + +L V+ D LKT+ P FD VAN+PY ISSP V KL+
Sbjct: 88 PRLVAELHKRVQGTPVASKLQVLVGDVLKTDLPFFDTCVANLPYQISSPFVFKLLLHRPF 147
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 148 FRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVV 207
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P +N EW R F +KNKTL A FK
Sbjct: 208 RIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFK 243
>gi|332233664|ref|XP_003266024.1| PREDICTED: probable dimethyladenosine transferase [Nomascus
leucogenys]
Length = 313
Score = 213 bits (541), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 143/216 (66%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+ GQHIL N +++SI+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D
Sbjct: 28 LMFNTGIGQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELD 87
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L++R + +L V+ D LKT+ P FD VAN+PY ISSP V KL+
Sbjct: 88 PRLVAELHKRVQGTPVASKLQVLVGDVLKTDLPFFDTCVANLPYQISSPFVFKLLLHRPF 147
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 148 FRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVV 207
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P +N EW R F +KNKTL A FK
Sbjct: 208 RIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFK 243
>gi|296194498|ref|XP_002806669.1| PREDICTED: LOW QUALITY PROTEIN: probable dimethyladenosine
transferase-like [Callithrix jacchus]
Length = 313
Score = 213 bits (541), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 143/216 (66%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+ GQHIL N +++SI+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D
Sbjct: 28 LMFNTGIGQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELD 87
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L++R + +L V+ D LKT+ P FD VAN+PY ISSP V KL+
Sbjct: 88 PRLVAELHKRVQGTPVASKLQVLVGDVLKTDLPFFDACVANLPYQISSPFVFKLLLHRPF 147
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 148 FRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVV 207
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P +N EW R F +KNKTL A FK
Sbjct: 208 RIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFK 243
>gi|426246431|ref|XP_004016997.1| PREDICTED: probable dimethyladenosine transferase [Ovis aries]
Length = 285
Score = 213 bits (541), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 106/215 (49%), Positives = 142/215 (66%)
Query: 3 FFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDE 62
F+ GQHIL N +++SI+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D
Sbjct: 1 MFNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVIACELDP 60
Query: 63 RMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSF 122
R+V L++R + +L V+ D LKT+ P FD VAN+PY ISSP V KL+ F
Sbjct: 61 RLVAELHKRVQGTPLASKLQVMVGDVLKTDLPFFDACVANLPYQISSPFVFKLLLHRPFF 120
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
R A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 121 RCAVLMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVVR 180
Query: 183 IRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P +N EW R F +KNKTL A FK
Sbjct: 181 IEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFK 215
>gi|432104598|gb|ELK31210.1| Putative dimethyladenosine transferase [Myotis davidii]
Length = 285
Score = 213 bits (541), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 106/215 (49%), Positives = 142/215 (66%)
Query: 3 FFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDE 62
F+ GQHIL N +++SI+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D
Sbjct: 1 MFNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVIACELDP 60
Query: 63 RMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSF 122
R+V L++R + +L V+ D LKT+ P FD VAN+PY ISSP V KL+ F
Sbjct: 61 RLVAELHKRVQGTPLASKLQVLVGDVLKTDLPFFDACVANLPYQISSPFVFKLLLHRPFF 120
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
R A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 121 RCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVVR 180
Query: 183 IRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P +N EW R F +KNKTL A FK
Sbjct: 181 IEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFK 215
>gi|391330956|ref|XP_003739917.1| PREDICTED: probable dimethyladenosine transferase-like [Metaseiulus
occidentalis]
Length = 319
Score = 212 bits (540), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 104/223 (46%), Positives = 147/223 (65%), Gaps = 1/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ GQHIL N V+ S+V K+++ D VLEIGPGTGN+T++LLE +KKV A E+D R
Sbjct: 36 FNTGLGQHILKNPLVIQSMVEKAAVRSTDVVLEIGPGTGNMTVRLLEKAKKVVAFEVDPR 95
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
MV L +R + +L +I D ++ + P FDL VAN+PY ISSP V KL+ FR
Sbjct: 96 MVAELQKRVQCTPLQQKLQIIVGDVIRNDLPFFDLCVANMPYQISSPFVFKLLLHRPFFR 155
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A L+ QKEFA+RL+A PGD ++RL+VN +L+A V+ +M V K +F P PKV+S+V+ +
Sbjct: 156 CAILMFQKEFAQRLVAKPGDKFYSRLSVNTQLLARVDIIMKVGKNNFRPPPKVESAVIRL 215
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
P+ P+++ W R CF +KNKTL A F Q V+++L
Sbjct: 216 EPRNPPPNIDYTSWDGLLRVCFVRKNKTLAAEFTQ-GSVLQML 257
>gi|313215231|emb|CBY42886.1| unnamed protein product [Oikopleura dioica]
Length = 289
Score = 212 bits (540), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 110/227 (48%), Positives = 150/227 (66%), Gaps = 3/227 (1%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+F GQHIL N +V+ S+V K+ + P DT+LEIGPGTGN+T+KLLE KKV A+E+D
Sbjct: 20 VFNTSGYGQHILKNPQVVQSMVEKAGVLPSDTILEIGPGTGNMTVKLLEKCKKVIALEVD 79
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
ERMV + +R + +L +I+KDALK E P FDLVVAN+PY ISSP+ KL+
Sbjct: 80 ERMVAEVQKRVMGTPLKHKLTIINKDALKAELPFFDLVVANLPYAISSPITFKLLLHRPM 139
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ QKEFA RL+A PGD ++RL+V V+ +A V+ ++ V K +F P PKV+S+VV
Sbjct: 140 FRVAVLMFQKEFADRLVAQPGDKIYSRLSVAVQSLARVDRILKVGKNNFKPPPKVESTVV 199
Query: 182 IIRPKAEIPDVNL--DEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
I P+ +N EW + R CF +KN+ + F KKV+E L
Sbjct: 200 RIEPRRPPLPINFTQGEWDSMLRICFGRKNRIMKGEFTN-KKVLETL 245
>gi|348553891|ref|XP_003462759.1| PREDICTED: probable dimethyladenosine transferase-like [Cavia
porcellus]
Length = 313
Score = 212 bits (540), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 142/214 (66%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ GQHIL N +++SI+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D R
Sbjct: 30 FNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPR 89
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
+V L++R + +L V+ D LKT+ P FD VAN+PY ISSP V KL+ FR
Sbjct: 90 LVAELHKRVQGTPLASKLQVMVGDVLKTDLPFFDACVANLPYQISSPFVFKLLLHRPFFR 149
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV I
Sbjct: 150 CAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVVRI 209
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
PK P +N EW R F +KNKTL A FK
Sbjct: 210 EPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFK 243
>gi|417398802|gb|JAA46434.1| Putative ribosomal rna adenine dimethylase [Desmodus rotundus]
Length = 313
Score = 212 bits (540), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 142/214 (66%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ GQHIL N +++SI+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D R
Sbjct: 30 FNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVIACELDPR 89
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
+V L++R + +L V+ D LKT+ P FD VAN+PY ISSP V KL+ FR
Sbjct: 90 LVAELHKRVQGTPLASKLQVMVGDVLKTDLPFFDACVANLPYQISSPFVFKLLLHRPFFR 149
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV I
Sbjct: 150 CAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVVRI 209
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
PK P +N EW R F +KNKTL A FK
Sbjct: 210 EPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFK 243
>gi|380785603|gb|AFE64677.1| probable dimethyladenosine transferase [Macaca mulatta]
gi|383413105|gb|AFH29766.1| putative dimethyladenosine transferase [Macaca mulatta]
Length = 313
Score = 212 bits (540), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 143/216 (66%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+ GQHIL N +++SI+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D
Sbjct: 28 LMFNTGIGQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELD 87
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L++R + +L V+ D LKT+ P FD VAN+PY ISSP V KL+
Sbjct: 88 PRLVAELHKRVQGTPVASKLQVLVGDVLKTDLPFFDTCVANLPYQISSPFVFKLLLHRPF 147
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 148 FRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVV 207
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P +N EW R F +KNKTL A FK
Sbjct: 208 RIEPKNPPPPINFQEWDGLVRITFVRKNKTLPAAFK 243
>gi|351698203|gb|EHB01122.1| Putative dimethyladenosine transferase [Heterocephalus glaber]
Length = 299
Score = 212 bits (540), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 142/214 (66%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ GQHIL N +++SI+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D R
Sbjct: 16 FNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPR 75
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
+V L++R + +L V+ D LKT+ P FD VAN+PY ISSP V KL+ FR
Sbjct: 76 LVAELHKRVQGTPLASKLQVMVGDVLKTDLPFFDACVANLPYQISSPFVFKLLLHRPFFR 135
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV I
Sbjct: 136 CAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVVRI 195
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
PK P +N EW R F +KNKTL A FK
Sbjct: 196 EPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFK 229
>gi|410948671|ref|XP_003981054.1| PREDICTED: probable dimethyladenosine transferase [Felis catus]
Length = 313
Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 105/216 (48%), Positives = 143/216 (66%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+ GQHIL N +++SI+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D
Sbjct: 28 LMFNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVIACELD 87
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L++R + +L V+ D LKT+ P FD VAN+PY ISSP V KL+
Sbjct: 88 PRLVAELHKRVQGTPLASKLQVLVGDVLKTDLPFFDACVANLPYQISSPFVFKLLLHRPF 147
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P P+V+SSVV
Sbjct: 148 FRCAVLMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPRVESSVV 207
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P +N EW R F +KNKTL A FK
Sbjct: 208 RIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFK 243
>gi|313228791|emb|CBY17942.1| unnamed protein product [Oikopleura dioica]
Length = 318
Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 110/227 (48%), Positives = 150/227 (66%), Gaps = 3/227 (1%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+F GQHIL N +V+ S+V K+ + P DT+LEIGPGTGN+T+KLLE KKV A+E+D
Sbjct: 31 VFNTSGYGQHILKNPQVVQSMVEKAGVLPSDTILEIGPGTGNMTVKLLEKCKKVIALEVD 90
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
ERMV + +R + +L +I+KDALK E P FDLVVAN+PY ISSP+ KL+
Sbjct: 91 ERMVAEVQKRVMGTPLKHKLTIINKDALKAELPFFDLVVANLPYAISSPITFKLLLHRPM 150
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ QKEFA RL+A PGD ++RL+V V+ +A V+ ++ V K +F P PKV+S+VV
Sbjct: 151 FRVAVLMFQKEFADRLVAQPGDKIYSRLSVAVQSLARVDRILKVGKNNFKPPPKVESTVV 210
Query: 182 IIRPKAEIPDVNL--DEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
I P+ +N EW + R CF +KN+ + F KKV+E L
Sbjct: 211 RIEPRRPPLPINFTQGEWDSMLRICFGRKNRIMKGEFTN-KKVLETL 256
>gi|354467604|ref|XP_003496259.1| PREDICTED: probable dimethyladenosine transferase-like [Cricetulus
griseus]
gi|344235961|gb|EGV92064.1| putative dimethyladenosine transferase [Cricetulus griseus]
Length = 313
Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 105/216 (48%), Positives = 143/216 (66%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+ GQHIL N +++SI+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D
Sbjct: 28 LMFNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELD 87
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L++R + +L V+ D LK++ P FD VAN+PY ISSP V KL+
Sbjct: 88 PRLVAELHKRVQGTPLASKLQVLVGDVLKSDLPFFDACVANLPYQISSPFVFKLLLHRPF 147
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 148 FRCAVLMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVV 207
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P +N EW R F +KNKTL A FK
Sbjct: 208 RIEPKNPPPPINFQEWDGLVRIAFVRKNKTLSAAFK 243
>gi|126315217|ref|XP_001366147.1| PREDICTED: probable dimethyladenosine transferase-like [Monodelphis
domestica]
Length = 309
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 143/216 (66%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+ GQHIL N +++SI+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D
Sbjct: 24 VMFNTGLGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELD 83
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L++R + +L V+ D LKT+ P FD VAN+PY ISSP V KL+
Sbjct: 84 PRLVAELHKRVQGTPQASKLQVMVGDVLKTDLPFFDACVANLPYQISSPFVFKLLLHRPF 143
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 144 FRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVV 203
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P +N EW R F +KNKTL A FK
Sbjct: 204 RIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFK 239
>gi|21313560|ref|NP_079723.1| probable dimethyladenosine transferase [Mus musculus]
gi|27151491|sp|Q9D0D4.1|DIM1_MOUSE RecName: Full=Probable dimethyladenosine transferase; AltName:
Full=DIM1 dimethyladenosine transferase 1 homolog;
AltName: Full=DIM1 dimethyladenosine transferase 1-like;
AltName: Full=Probable 18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=Probable 18S rRNA
dimethylase; AltName: Full=Probable
S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|12847736|dbj|BAB27687.1| unnamed protein product [Mus musculus]
gi|18043925|gb|AAH19799.1| DIM1 dimethyladenosine transferase 1-like (S. cerevisiae) [Mus
musculus]
gi|74148362|dbj|BAE36330.1| unnamed protein product [Mus musculus]
gi|148686528|gb|EDL18475.1| RIKEN cDNA 1500031M22, isoform CRA_b [Mus musculus]
Length = 313
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 105/216 (48%), Positives = 143/216 (66%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+ GQHIL N +++SI+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D
Sbjct: 28 LMFNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELD 87
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L++R + +L V+ D LK++ P FD VAN+PY ISSP V KL+
Sbjct: 88 PRLVAELHKRVQGTPLASKLQVLVGDVLKSDLPFFDACVANLPYQISSPFVFKLLLHRPF 147
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 148 FRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVV 207
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P +N EW R F +KNKTL A FK
Sbjct: 208 RIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFK 243
>gi|149059278|gb|EDM10285.1| similar to RIKEN cDNA 1500031M22 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 313
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 105/216 (48%), Positives = 143/216 (66%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+ GQHIL N +++SI+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D
Sbjct: 28 LMFNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELD 87
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L++R + +L V+ D LK++ P FD VAN+PY ISSP V KL+
Sbjct: 88 PRLVAELHKRVQGTPLASKLQVLVGDVLKSDLPFFDACVANLPYQISSPFVFKLLLHRPF 147
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 148 FRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVV 207
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P +N EW R F +KNKTL A FK
Sbjct: 208 RIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFK 243
>gi|114051271|ref|NP_001039501.1| probable dimethyladenosine transferase [Bos taurus]
gi|114149276|sp|Q2KHT8.1|DIM1_BOVIN RecName: Full=Probable dimethyladenosine transferase; AltName:
Full=DIM1 dimethyladenosine transferase 1 homolog;
AltName: Full=DIM1 dimethyladenosine transferase 1-like;
AltName: Full=Probable 18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=Probable 18S rRNA
dimethylase; AltName: Full=Probable
S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|86438246|gb|AAI12887.1| DIM1 dimethyladenosine transferase 1-like (S. cerevisiae) [Bos
taurus]
gi|296475843|tpg|DAA17958.1| TPA: probable dimethyladenosine transferase [Bos taurus]
gi|440902137|gb|ELR52971.1| Putative dimethyladenosine transferase [Bos grunniens mutus]
Length = 313
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 105/216 (48%), Positives = 142/216 (65%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+ GQHIL N +++SI+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D
Sbjct: 28 LMFNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVIACELD 87
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L++R + +L V+ D LK + P FD VAN+PY ISSP V KL+
Sbjct: 88 PRLVAELHKRVQGTPLASKLQVMVGDVLKADLPFFDACVANLPYQISSPFVFKLLLHRPF 147
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 148 FRCAVLMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVV 207
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P +N EW R F +KNKTL A FK
Sbjct: 208 RIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFK 243
>gi|158258883|dbj|BAF85412.1| unnamed protein product [Homo sapiens]
Length = 313
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/216 (48%), Positives = 143/216 (66%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+ GQHIL N +++SI+ K+++ P D VLE+GPGTGN+T+KLLE +K+V A E+D
Sbjct: 28 LMFNTGIGQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKEVVACELD 87
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L++R + +L V+ D LKT+ P FD VAN+PY ISSP V KL+
Sbjct: 88 PRLVAELHKRVQGTPVASKLQVLVGDVLKTDLPFFDTCVANLPYQISSPFVFKLLLHRPF 147
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 148 FRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVV 207
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P +N EW R F +KNKTL A FK
Sbjct: 208 RIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFK 243
>gi|67464821|ref|XP_648602.1| dimethyladenosine transferase [Entamoeba histolytica HM-1:IMSS]
gi|56464806|gb|EAL43214.1| dimethyladenosine transferase, putative [Entamoeba histolytica
HM-1:IMSS]
gi|407044216|gb|EKE42449.1| dimethyladenosine transferase [Entamoeba nuttalli P19]
gi|449709002|gb|EMD48354.1| dimethyladenosine transferase, putative [Entamoeba histolytica
KU27]
Length = 295
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 108/214 (50%), Positives = 141/214 (65%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
FHKS+GQHIL N + IV + + D VLEIGPGTGNLT+K+L KK+ AIEID R
Sbjct: 12 FHKSEGQHILKNPMIAQQIVDAAELRRTDVVLEIGPGTGNLTMKMLPFCKKLIAIEIDPR 71
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R + + + +L +I D LK E P FD+ V+N PY ISSPLV KL+ FR
Sbjct: 72 MAAELKKRVSVTDYVKKLEIIQGDFLKVELPYFDVCVSNTPYSISSPLVFKLLNHRPQFR 131
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
SA L+ Q+EFA RL+A PGD + RL+VN +L+ADV VM V + +F P PKV+SSVV +
Sbjct: 132 SAVLMFQREFAMRLVAKPGDPLYCRLSVNTQLLADVFHVMKVGRNNFKPPPKVESSVVRM 191
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
P P +NL E+ F R CF +K+KTL + F+
Sbjct: 192 IPVKPAPPLNLVEFDGFLRICFLRKHKTLSSLFR 225
>gi|344272567|ref|XP_003408103.1| PREDICTED: probable dimethyladenosine transferase-like [Loxodonta
africana]
Length = 313
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/216 (48%), Positives = 142/216 (65%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+ GQHIL N +++SI+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D
Sbjct: 28 LMFNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELD 87
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L++R + +L V+ D LK + P FD VAN+PY ISSP V KL+
Sbjct: 88 PRLVAELHKRVQGTPLASKLQVMVGDVLKADLPFFDACVANLPYQISSPFVFKLLLHRPF 147
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 148 FRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVV 207
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P +N EW R F +KNKTL A FK
Sbjct: 208 RIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFK 243
>gi|330844811|ref|XP_003294306.1| hypothetical protein DICPUDRAFT_84787 [Dictyostelium purpureum]
gi|325075260|gb|EGC29171.1| hypothetical protein DICPUDRAFT_84787 [Dictyostelium purpureum]
Length = 315
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/214 (51%), Positives = 142/214 (66%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
+KS GQH+L N ++DSIV K+ + DTVLEIGPGTGNLT+KLLE KKV A+E+D R
Sbjct: 30 MNKSYGQHLLKNPLIIDSIVEKAQLKSTDTVLEIGPGTGNLTMKLLENCKKVIAVEVDPR 89
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R A S + L +I D LK + P FD+ VAN+PY ISSPL KL+ FR
Sbjct: 90 MAAELQKRVAASPYAQHLQIILGDFLKVDLPYFDVCVANVPYQISSPLTFKLLAHRPIFR 149
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+A L+ Q+EFA RL A PGDS + RL+VN +L++ V +M V K +FLP PKV+S+VV I
Sbjct: 150 TAVLMFQREFALRLAAKPGDSLYCRLSVNTQLLSKVTHLMKVGKNNFLPPPKVESAVVKI 209
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
P P +N EW + CFS+KNKTL F+
Sbjct: 210 EPFNPPPPINFIEWDGLVKLCFSRKNKTLSGIFR 243
>gi|346473505|gb|AEO36597.1| hypothetical protein [Amblyomma maculatum]
Length = 266
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 102/197 (51%), Positives = 136/197 (69%)
Query: 22 IVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRL 81
++ KS+I P D VLE+GPGTGN+T+KLLE +KKV A E+D R+V L +R + H +L
Sbjct: 1 MIEKSAIRPTDVVLEVGPGTGNMTVKLLEKAKKVIACEVDTRLVAELQKRVQGTHLHSKL 60
Query: 82 NVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASP 141
++I D LK+E P FD+ VAN+PY ISSP V KL+ FR ATL+ Q+EFA+RL+A P
Sbjct: 61 HIIVGDVLKSELPFFDICVANLPYQISSPFVFKLLLHRPFFRCATLMFQREFAQRLVAKP 120
Query: 142 GDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAEIPDVNLDEWRAFT 201
GD + RL+VN +L+A V+ +M V K +F P PKV+SSVV + P+ P +N EW
Sbjct: 121 GDKLYCRLSVNTQLLARVDILMKVGKNNFRPPPKVESSVVRLEPRNPPPAINFIEWDGLL 180
Query: 202 RTCFSKKNKTLGATFKQ 218
R CF +KNKTL A FKQ
Sbjct: 181 RICFVRKNKTLSAAFKQ 197
>gi|405961094|gb|EKC26948.1| Putative dimethyladenosine transferase [Crassostrea gigas]
Length = 289
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/201 (52%), Positives = 140/201 (69%), Gaps = 1/201 (0%)
Query: 26 SSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVIS 85
S++ P D VLE+GPGTGN+T+KLLE +KKV A EID R+ L +R + F +L++I
Sbjct: 28 SALRPTDVVLEVGPGTGNMTMKLLEKTKKVIACEIDPRLAAELQKRVQGTPFQTKLHLIV 87
Query: 86 KDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSE 145
D L+T+ P FD+ VAN+PY ISSP V KL+ FR A L+ Q+EFA+RL+A PGD
Sbjct: 88 GDVLRTDLPFFDICVANLPYQISSPFVFKLLLHRPFFRCAVLMFQREFAQRLVAKPGDKL 147
Query: 146 FNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAEIPDVNLDEWRAFTRTCF 205
+ RL+VN +L+A V+ +M VSK +F P PKV+SSVV I P+ P +N EW R CF
Sbjct: 148 YCRLSVNTQLLARVDHLMKVSKNNFRPPPKVESSVVRIEPRNPPPPINFQEWDGLVRICF 207
Query: 206 SKKNKTLGATFKQKKKVIELL 226
S+KNKT+GA+FK KV+ELL
Sbjct: 208 SRKNKTIGASFKY-TKVLELL 227
>gi|335775227|gb|AEH58501.1| dimethyladenosine transferase-like protein [Equus caballus]
Length = 280
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/209 (50%), Positives = 140/209 (66%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQHIL N +++SI+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D R+V L
Sbjct: 2 GQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVIACELDPRLVAEL 61
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
++R + +L V+ D LKT+ P FD VAN+PY ISSP V KL+ FR A L+
Sbjct: 62 HKRVQGTPLAGKLQVMVGDVLKTDLPFFDACVANLPYQISSPFVFKLLLHRPFFRCAVLM 121
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV I PK
Sbjct: 122 FQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVVRIEPKNP 181
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
P +N EW R F +KNKTL A FK
Sbjct: 182 PPPINFQEWDGLVRITFVRKNKTLSAAFK 210
>gi|166158346|ref|NP_001099878.2| probable dimethyladenosine transferase [Rattus norvegicus]
gi|165971279|gb|AAI58730.1| DIM1 dimethyladenosine transferase 1-like (S. cerevisiae) [Rattus
norvegicus]
Length = 313
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 105/216 (48%), Positives = 142/216 (65%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+ GQHIL N +++SI+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D
Sbjct: 28 LMFNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELD 87
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L++R + +L V+ D LK++ P FD VAN+PY ISSP V KL+
Sbjct: 88 PRLVAELHKRVQGTPLASKLQVLVGDVLKSDLPFFDACVANLPYQISSPFVFKLLLHRPF 147
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 148 FRCAILMFQREFALRLAAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVV 207
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P +N EW R F +KNKTL A FK
Sbjct: 208 RIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFK 243
>gi|67463766|pdb|1ZQ9|A Chain A, Crystal Structure Of Human Dimethyladenosine Transferase
gi|67463767|pdb|1ZQ9|B Chain B, Crystal Structure Of Human Dimethyladenosine Transferase
Length = 285
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 105/209 (50%), Positives = 140/209 (66%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQHIL N +++SI+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D R+V L
Sbjct: 7 GQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAEL 66
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
++R + +L V+ D LKT+ P FD VAN+PY ISSP V KL+ FR A L+
Sbjct: 67 HKRVQGTPVASKLQVLVGDVLKTDLPFFDTCVANLPYQISSPFVFKLLLHRPFFRCAILM 126
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV I PK
Sbjct: 127 FQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVVRIEPKNP 186
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
P +N EW R F +KNKTL A FK
Sbjct: 187 PPPINFQEWDGLVRITFVRKNKTLSAAFK 215
>gi|324516507|gb|ADY46552.1| Dimethyladenosine transferase [Ascaris suum]
Length = 308
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 111/223 (49%), Positives = 148/223 (66%), Gaps = 1/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ KGQHIL N ++++I+ KS+I DTVLE+GPGTGNLT+K+LE +KKV A EID R
Sbjct: 25 FNTEKGQHILKNPGIVNAIIEKSAIKNTDTVLEVGPGTGNLTVKILEHAKKVIACEIDTR 84
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M+ L +R + +L V D +K E+P FD+ VAN+PY ISSP V KL+ R
Sbjct: 85 MIAELKKRVLGTPVQQKLEVRPGDVMKVEWPFFDVCVANLPYQISSPFVFKLLLQRPLPR 144
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A L+ QKEFA RLLA P + + RL+VNV+L+A VE +M V + +F P PKVDS+VV I
Sbjct: 145 YAVLMFQKEFADRLLAKPCEKSYCRLSVNVQLLAKVEHLMRVKRTEFRPPPKVDSAVVRI 204
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
P+ P +N EW R F +K+KTL + FKQ K+V +LL
Sbjct: 205 EPRNPPPPINFQEWDGLLRIVFLRKSKTLLSIFKQ-KQVCDLL 246
>gi|27151490|sp|Q95KJ0.1|DIM1_MACFA RecName: Full=Probable dimethyladenosine transferase; AltName:
Full=DIM1 dimethyladenosine transferase 1 homolog;
AltName: Full=DIM1 dimethyladenosine transferase 1-like;
AltName: Full=Probable 18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=Probable 18S rRNA
dimethylase; AltName: Full=Probable
S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|13874484|dbj|BAB46866.1| hypothetical protein [Macaca fascicularis]
Length = 313
Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 105/216 (48%), Positives = 141/216 (65%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+ GQHIL N +++SI+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D
Sbjct: 28 LMFNTGIGQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELD 87
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L +R + +L V+ D LKT+ P FD VAN+PY ISSP V KL+
Sbjct: 88 PRLVAELRKRVQGTPVASKLQVLVGDVLKTDLPFFDTCVANLPYQISSPFVFKLLLHRPF 147
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+E A RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 148 FRCAILMFQRELALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVV 207
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P +N EW R F +KNKTL A FK
Sbjct: 208 RIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFK 243
>gi|332376340|gb|AEE63310.1| unknown [Dendroctonus ponderosae]
Length = 306
Score = 209 bits (532), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 111/217 (51%), Positives = 147/217 (67%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+K GQHIL N V+ S+V KS+I DTVLEIGPGTGN+T++LLE +KKV A EID
Sbjct: 21 ITFNKQFGQHILKNPMVITSMVEKSAIRSTDTVLEIGPGTGNMTVRLLEKAKKVVACEID 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L +R + +L ++ D LK E P F++ VANIPY ISSPLV KL+
Sbjct: 81 TRLVAELQKRVQGTHLQSKLEILVGDVLKRELPFFNICVANIPYQISSPLVFKLLLHRPF 140
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A ++ Q+EFA+RL+A PGD + RL+VN +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 141 FRCAVIMFQREFAQRLVAKPGDKLYCRLSVNTQLLARVDMLMKVGKNNFRPPPKVESSVV 200
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
I P+ P + EW TR F++KN+TLG+ FKQ
Sbjct: 201 RIEPRNPPPPIPYIEWDGLTRIAFTRKNRTLGSAFKQ 237
>gi|74222329|dbj|BAE26964.1| unnamed protein product [Mus musculus]
Length = 313
Score = 209 bits (532), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 104/216 (48%), Positives = 142/216 (65%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+ GQHIL N +++SI+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A +D
Sbjct: 28 LMFNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACGLD 87
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L++R + +L V+ D LK++ P FD VAN+PY ISSP V KL+
Sbjct: 88 PRLVAELHKRVQGTPLASKLQVLVGDVLKSDLPFFDACVANLPYQISSPFVFKLLLHRPF 147
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 148 FRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVV 207
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P +N EW R F +KNKTL A FK
Sbjct: 208 RIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFK 243
>gi|363744008|ref|XP_424746.3| PREDICTED: probable dimethyladenosine transferase [Gallus gallus]
Length = 307
Score = 209 bits (531), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 107/216 (49%), Positives = 139/216 (64%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+ GQHIL N V++SI+ K+++ D VLE+GPGTGNLT+K+LE KKV A EID
Sbjct: 22 ILFNTGAGQHILKNPLVVNSIIEKAALRRTDVVLEVGPGTGNLTVKMLEKVKKVIACEID 81
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L +R + ++L + D LKTE P FD VAN+PY ISSP V KL+
Sbjct: 82 PRLVGELQKRVQGTCLANKLEIKVGDVLKTELPFFDACVANLPYQISSPFVFKLLLHRPF 141
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PG + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 142 FRCAILMFQREFALRLVAKPGSKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVV 201
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P +N EW R F +KNKTL A FK
Sbjct: 202 RIEPKNPPPPINFQEWDGLVRIAFVRKNKTLSAAFK 237
>gi|426384600|ref|XP_004058848.1| PREDICTED: probable dimethyladenosine transferase [Gorilla gorilla
gorilla]
Length = 313
Score = 209 bits (531), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 105/216 (48%), Positives = 142/216 (65%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+ GQHIL N +++SI+ K+++ P D VLE+G GTGN+T+KLLE +KKV A E+D
Sbjct: 28 LMFNTGIGQHILKNPLIINSIIDKAALRPTDVVLEVGSGTGNMTVKLLEKAKKVVACELD 87
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L++R + +L V+ D LKT+ P FD VAN+PY ISSP V KL+
Sbjct: 88 PRLVAELHKRVQGTPVASKLQVLVGDVLKTDLPFFDTCVANLPYQISSPFVFKLLLHRPF 147
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 148 FRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVV 207
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P +N EW R F +KNKTL A FK
Sbjct: 208 RIEPKNPPPPINFQEWDGLVRIIFVRKNKTLSAAFK 243
>gi|358255919|dbj|GAA57529.1| 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase
[Clonorchis sinensis]
Length = 314
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 105/227 (46%), Positives = 148/227 (65%), Gaps = 2/227 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F K KGQHIL N ++++++ K+ + DTVLEIG GTGNLT+KLLE +KKV A EID
Sbjct: 19 IRFQKQKGQHILKNPLIINTMIEKAGVKNTDTVLEIGAGTGNLTVKLLERAKKVCAFEID 78
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALK-TEFPQFDLVVANIPYGISSPLVAKLVYGTK 120
RMV L +R S +L ++ DA+K + +P+FDL V+N+PY ISSP + +L+ +
Sbjct: 79 PRMVAELQKRLQTSSNRSKLEILVGDAIKASTWPKFDLCVSNLPYQISSPFIQRLMKAGR 138
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
+R+A +++QKEFA RLLA PGD + RL+ V+ V +M +S+ F P P+VDS+V
Sbjct: 139 GYRAAVVMVQKEFADRLLAQPGDKLYCRLSAAVQFHCKVALLMRISRNSFRPPPRVDSAV 198
Query: 181 VIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLR 227
V + P+ +P V EW R F++KNKT+GA F K V LLR
Sbjct: 199 VRVEPRHPLPPVTFSEWDGLLRLVFARKNKTVGANF-SGKAVAALLR 244
>gi|328866316|gb|EGG14701.1| dimethyladenosine transferase [Dictyostelium fasciculatum]
Length = 319
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 112/223 (50%), Positives = 149/223 (66%), Gaps = 1/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
+K+ GQH+L N ++D+IV K+ + DTVLEIGPGTGNLT+KLLE KKV A+E+D R
Sbjct: 35 MNKAYGQHLLKNPLIIDAIVEKAQLKSTDTVLEIGPGTGNLTMKLLESCKKVIAVEVDPR 94
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L++R + + + L +I D LK + P FD+ VAN+PY ISSPL KL+ FR
Sbjct: 95 MAAELHKRVSTTPYASHLQIILGDFLKADLPYFDVCVANVPYQISSPLTFKLLAHRPVFR 154
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
SA L+ Q EFA RL A PGDS + RL+VN +L+ V +M+V K +FLP PKV+S+VV I
Sbjct: 155 SAVLMFQLEFAARLAARPGDSLYCRLSVNTQLLGKVTKLMNVGKNNFLPPPKVESAVVRI 214
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
+P P +N EW + CFS+KNKT+ A FK VIE+L
Sbjct: 215 QPFNPPPPINFVEWDGLVKLCFSRKNKTIAAIFKT-NSVIEML 256
>gi|402470190|gb|EJW04579.1| dimethyladenosine transferase [Edhazardia aedis USNM 41457]
Length = 277
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 106/218 (48%), Positives = 152/218 (69%), Gaps = 3/218 (1%)
Query: 3 FFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDE 62
F+K GQHIL NQ ++D+I+ ++ I D VLEIG GTGNLT+KLLE +K+V E D
Sbjct: 5 LFNKKLGQHILVNQTIIDTIITRAKIKSTDVVLEIGGGTGNLTMKLLEKAKRVVCYEKDP 64
Query: 63 RM-VEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+ +E++ + + G ++ +I DALK +FP FDL ++NIPY ISSPL KL+ + +
Sbjct: 65 RLAMELVKKVNSVKGLVNKFELIVGDALKHDFPYFDLCISNIPYQISSPLTFKLL--SYN 122
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
F +A L+ QKEFA RL+A PG E+ RL+V V++VA+ E V++VSK++F P PKV+SSVV
Sbjct: 123 FNAAYLMFQKEFADRLVAKPGSKEWCRLSVAVQIVANTEHVLNVSKKNFRPPPKVESSVV 182
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQK 219
I+P+ P +NL+E + CF ++NKTLG+ FK K
Sbjct: 183 KIKPRYPKPPINLEELNKLLKICFLRRNKTLGSIFKGK 220
>gi|66810281|ref|XP_638864.1| dimethyladenosine transferase [Dictyostelium discoideum AX4]
gi|74854506|sp|Q54QK7.1|DIM1_DICDI RecName: Full=Probable dimethyladenosine transferase; AltName:
Full=DIM1 dimethyladenosine transferase 1 homolog;
AltName: Full=Probable 18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=Probable 18S rRNA
dimethylase; AltName: Full=Probable
S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|60467487|gb|EAL65509.1| dimethyladenosine transferase [Dictyostelium discoideum AX4]
Length = 314
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 116/223 (52%), Positives = 146/223 (65%), Gaps = 1/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
+KS GQH+L N ++D+IV KS + DTVLEIGPGTGNLT+KLLE KKV AIE+D R
Sbjct: 29 MNKSYGQHLLKNPLIIDAIVDKSQLKSTDTVLEIGPGTGNLTMKLLENCKKVIAIEVDPR 88
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R A S + L +I D LK + P FD+ VAN+PY ISSPL KL+ FR
Sbjct: 89 MAAELQKRVAASPYAQHLQIILGDFLKVDLPYFDVCVANVPYQISSPLTFKLLAHRPIFR 148
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+A L+ QKEFA RL A PGDS + RL+VN +L++ V +M V K +FLP PKV+S+VV I
Sbjct: 149 TAVLMFQKEFALRLGAKPGDSLYCRLSVNTQLLSKVTHLMKVGKNNFLPPPKVESAVVRI 208
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
P P +N EW + CFS+KNKTL F+ VIE L
Sbjct: 209 EPFNPPPPINFVEWDGLVKLCFSRKNKTLSGIFRV-SSVIETL 250
>gi|71656161|ref|XP_816632.1| ribosomal RNA adenine dimethylase family protein [Trypanosoma cruzi
strain CL Brener]
gi|70881773|gb|EAN94781.1| ribosomal RNA adenine dimethylase family protein, putative
[Trypanosoma cruzi]
Length = 344
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/224 (48%), Positives = 145/224 (64%), Gaps = 1/224 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+K GQHIL N V+ +IV K++I P D VLEIGPGTGNLT KLL+VSKKV A E+D
Sbjct: 60 MVFNKGFGQHILKNPLVIAAIVEKAAIKPTDVVLEIGPGTGNLTEKLLQVSKKVIAFEVD 119
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV LN+R ++ +L VI + L EFP FD VAN+PY ISS LV KL+ +
Sbjct: 120 SRMVAELNKRFQNTPLASKLQVIRGNCLDHEFPYFDKCVANVPYAISSALVFKLLR-KPT 178
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
F+ A L+ Q+EFA R+ A PG + RL+VN +L+A +M +SK F P PKV+SSV+
Sbjct: 179 FKCAVLMFQREFALRVCAQPGAEAYCRLSVNSQLLARCSHLMKISKNSFNPPPKVESSVI 238
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIEL 225
+ PK PDV+ +EW + F++KNK + + F+ K V L
Sbjct: 239 RLDPKHPAPDVDFEEWDGLVKFIFNRKNKKVSSIFRTKNAVQTL 282
>gi|407852217|gb|EKG05843.1| ribosomal RNA adenine dimethylase family protein, putative
[Trypanosoma cruzi]
Length = 344
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/224 (48%), Positives = 145/224 (64%), Gaps = 1/224 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+K GQHIL N V+ +IV K++I P D VLEIGPGTGNLT KLL+VSKKV A E+D
Sbjct: 60 MVFNKGFGQHILKNPLVIAAIVEKAAIKPTDVVLEIGPGTGNLTEKLLQVSKKVIAFEVD 119
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV LN+R ++ +L VI + L EFP FD VAN+PY ISS LV KL+ +
Sbjct: 120 SRMVAELNKRFQNTPLASKLQVIRGNCLDHEFPYFDKCVANVPYAISSALVFKLLR-KPT 178
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
F+ A L+ Q+EFA R+ A PG + RL+VN +L+A +M +SK F P PKV+SSV+
Sbjct: 179 FKCAVLMFQREFALRVCAQPGAEAYCRLSVNSQLLARCSHLMKISKNSFNPPPKVESSVI 238
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIEL 225
+ PK PDV+ +EW + F++KNK + + F+ K V L
Sbjct: 239 RLDPKHPAPDVDFEEWDGLVKFIFNRKNKKVSSIFRTKNAVQTL 282
>gi|440491620|gb|ELQ74243.1| Ribosomal RNA adenine dimethylase [Trachipleistophora hominis]
Length = 266
Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 104/218 (47%), Positives = 148/218 (67%), Gaps = 2/218 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I + K GQHIL N ++D I+ +++I DTVLEIG GTGNLT+KLL +KKV E D
Sbjct: 3 IQYKKDLGQHILKNPGIIDRIIERANILETDTVLEIGSGTGNLTVKLLAKAKKVICYEKD 62
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
ERM L +R + ++ + D +K++FP FDL V+NIPY ISS L+ KL + +
Sbjct: 63 ERMAAELVKRVKSLNMYHKMKLFVGDCMKSDFPHFDLCVSNIPYQISSVLIFKLF--SYN 120
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR+A L+LQ EFA RL+A PG +++RL+V+ +L + VE++ VS+++F P PKV+S+VV
Sbjct: 121 FRAAFLMLQHEFAMRLVARPGSPDYSRLSVSTQLFSKVEYMFKVSRKNFNPMPKVESAVV 180
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQK 219
IR + E PD+N++E+ F R CF +KNKTLG F K
Sbjct: 181 KIRKRLEQPDINVEEFANFLRICFKRKNKTLGGVFGDK 218
>gi|344302294|gb|EGW32599.1| Dimethyladenosine transferase [Spathaspora passalidarum NRRL
Y-27907]
Length = 319
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 105/223 (47%), Positives = 146/223 (65%), Gaps = 1/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ + GQHIL N V IV K+ I P D VLE+GPGTGNLT+++LE +KKV A+E+D R
Sbjct: 32 FNTNLGQHILKNPLVAQGIVDKAQIRPSDVVLEVGPGTGNLTVRILEQAKKVIAVEMDPR 91
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R + +L ++ D +KTE P FD+ ++N PY ISSPLV KL+ + R
Sbjct: 92 MAAELTKRVHGTPQQKKLEILLGDFMKTELPYFDICISNTPYQISSPLVFKLLNQPRPPR 151
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ L+ Q+EFA RLLA PGD+ + RL+ NV++ A+V +M V K +F P P+V+SSVV I
Sbjct: 152 VSILMFQREFALRLLARPGDALYCRLSANVQMWANVTHIMKVGKNNFRPPPQVESSVVRI 211
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
K P+++ +EW R CF +KNKT+ A FK VIE+L
Sbjct: 212 EIKNPRPNIDFNEWDGLLRICFVRKNKTIAAGFKS-SNVIEIL 253
>gi|157872123|ref|XP_001684610.1| putative ribosomal RNA adenine dimethylase family protein
[Leishmania major strain Friedlin]
gi|68127680|emb|CAJ05804.1| putative ribosomal RNA adenine dimethylase family protein
[Leishmania major strain Friedlin]
Length = 374
Score = 207 bits (526), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 105/218 (48%), Positives = 144/218 (66%), Gaps = 1/218 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+K GQHIL N V+ +IV K++I P D V+EIGPGTGNLT KLL+ +KKV A EID
Sbjct: 69 IVFNKGFGQHILKNPLVIAAIVEKAAIKPTDIVIEIGPGTGNLTEKLLQTAKKVIAFEID 128
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV LN+R ++ +L +I + L+ +FP+FD VAN+PY ISS LV KL+ T +
Sbjct: 129 PRMVAELNKRFQNTPLASKLQIIRGNCLEQDFPRFDKCVANVPYAISSALVFKLLK-TPT 187
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
F+ A L+ Q+EFA R+ A PG + RL+VN +L+A +M +SK F P PKV+SSV+
Sbjct: 188 FKCAVLMFQREFALRVCAQPGSEAYCRLSVNSQLLARCSHLMKISKNSFNPPPKVESSVI 247
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQK 219
+ PK PDV+ +EW + FS+KNK + F+ K
Sbjct: 248 RLDPKYPPPDVDFEEWDGLVKMLFSRKNKKSSSIFRTK 285
>gi|398019144|ref|XP_003862736.1| ribosomal RNA adenine dimethylase family protein, putative
[Leishmania donovani]
gi|322500967|emb|CBZ36044.1| ribosomal RNA adenine dimethylase family protein, putative
[Leishmania donovani]
Length = 374
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 107/224 (47%), Positives = 145/224 (64%), Gaps = 1/224 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+K GQHIL N V+ +IV K++I P D V+EIGPGTGNLT KLL+ +KKV A EID
Sbjct: 69 IVFNKGFGQHILKNPLVIAAIVEKAAIKPTDIVIEIGPGTGNLTEKLLQTAKKVIAFEID 128
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV LN+R ++ +L +I + L+ +FP FD VAN+PY ISS LV KL+ T +
Sbjct: 129 PRMVAELNKRFQNTPLASKLQIIRGNCLEQDFPYFDKCVANVPYAISSALVFKLLK-TPT 187
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
F+ A L+ Q+EFA R+ A PG + RL+VN +L+A +M +SK F P PKV+SSV+
Sbjct: 188 FKCAVLMFQREFALRVCAQPGSEAYCRLSVNSQLLARCSHLMKISKNSFNPPPKVESSVI 247
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIEL 225
+ PK PDV+ +EW + FS+KNK + F+ K V L
Sbjct: 248 RLDPKHPRPDVDFEEWDGLVKMLFSRKNKKSSSIFRTKAAVQAL 291
>gi|407417208|gb|EKF38008.1| ribosomal RNA adenine dimethylase family protein, putative
[Trypanosoma cruzi marinkellei]
Length = 344
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 107/224 (47%), Positives = 144/224 (64%), Gaps = 1/224 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+K GQHIL N V+ +IV K++I P D VLEIGPGTGNLT KLL+ SKKV A E+D
Sbjct: 60 MVFNKGFGQHILKNPLVIAAIVEKAAIKPTDVVLEIGPGTGNLTEKLLQASKKVIAFEVD 119
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV LN+R ++ +L VI + L EFP FD VAN+PY ISS LV KL+ +
Sbjct: 120 SRMVAELNKRFQNTPLASKLQVIRGNCLDHEFPYFDKCVANVPYAISSALVFKLLR-KPT 178
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
F+ A L+ Q+EFA R+ A PG + RL+VN +L+A +M +SK F P PKV+SSV+
Sbjct: 179 FKCAVLMFQREFALRVCAQPGAEAYCRLSVNSQLLARCSHLMKISKNSFNPPPKVESSVI 238
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIEL 225
+ PK PDV+ +EW + F++KNK + + F+ K V L
Sbjct: 239 RLDPKHPAPDVDFEEWDGLVKLIFNRKNKKVSSIFRTKNAVQTL 282
>gi|254568850|ref|XP_002491535.1| Essential 18S rRNA dimethylase (dimethyladenosine transferase)
[Komagataella pastoris GS115]
gi|238031332|emb|CAY69255.1| Essential 18S rRNA dimethylase (dimethyladenosine transferase)
[Komagataella pastoris GS115]
gi|328351956|emb|CCA38355.1| dimethyladenosine transferase [Komagataella pastoris CBS 7435]
Length = 328
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 106/223 (47%), Positives = 147/223 (65%), Gaps = 1/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ GQHIL N V IV K++I P DTVLE+GPGTGNLT+++L+ ++KV A E+D R
Sbjct: 35 FNTQLGQHILKNPLVAQGIVDKANIRPSDTVLEVGPGTGNLTMRILQKARKVIASEMDPR 94
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R +L++I D +K + P FD+ ++N PY ISSPLV KL+ K R
Sbjct: 95 MAAELTKRVQGKPEQKKLDIILGDFIKQDLPYFDICISNTPYQISSPLVFKLLNQPKPPR 154
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A L+ Q+EFA RLLA PGDS + RL+VNV++ A+V +M V + +F P P+V+SSVV I
Sbjct: 155 VAILMFQREFALRLLARPGDSLYCRLSVNVQMWANVTHIMKVGRNNFRPPPQVESSVVRI 214
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
K P+++ +EW R CF +KN+T+ A FK K VIE+L
Sbjct: 215 EVKNPRPNIDFNEWDGLLRICFVRKNRTISAGFKN-KSVIEIL 256
>gi|146093446|ref|XP_001466834.1| putative ribosomal RNA adenine dimethylase family protein
[Leishmania infantum JPCM5]
gi|134071198|emb|CAM69883.1| putative ribosomal RNA adenine dimethylase family protein
[Leishmania infantum JPCM5]
Length = 374
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 107/224 (47%), Positives = 145/224 (64%), Gaps = 1/224 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+K GQHIL N V+ +IV K++I P D V+EIGPGTGNLT KLL+ +KKV A EID
Sbjct: 69 IVFNKGFGQHILKNPLVIAAIVEKAAIKPTDIVIEIGPGTGNLTEKLLQTAKKVIAFEID 128
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV LN+R ++ +L +I + L+ +FP FD VAN+PY ISS LV KL+ T +
Sbjct: 129 PRMVAELNKRFQNTPLASKLQIIRGNCLEQDFPYFDKCVANVPYAISSALVFKLLK-TPT 187
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
F+ A L+ Q+EFA R+ A PG + RL+VN +L+A +M +SK F P PKV+SSV+
Sbjct: 188 FKCAVLMFQREFALRVCAQPGSEAYCRLSVNSQLLARCSHLMKISKNSFNPPPKVESSVI 247
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIEL 225
+ PK PDV+ +EW + FS+KNK + F+ K V L
Sbjct: 248 RLDPKHPRPDVDFEEWDGLVKMLFSRKNKKSSSIFRTKAAVQAL 291
>gi|326934876|ref|XP_003213509.1| PREDICTED: probable dimethyladenosine transferase-like [Meleagris
gallopavo]
Length = 385
Score = 206 bits (525), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 139/216 (64%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+ GQHIL N V++SI+ K+++ D VLE+GPGTGNLT+K+LE KKV A EID
Sbjct: 100 ILFNTGAGQHILKNPLVVNSIIEKAALRRTDIVLEVGPGTGNLTVKMLEKVKKVIACEID 159
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L +R + ++L + D LKT+ P FD VAN+PY ISSP V KL+
Sbjct: 160 PRLVGELQKRVQGTCLANKLEIKVGDVLKTDLPFFDACVANLPYQISSPFVFKLLLHRPF 219
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PG + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 220 FRCAILMFQREFALRLVAKPGSKLYCRLSINTQLLARVDHLMKVGKNNFKPPPKVESSVV 279
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P +N EW R F +KNKTL A FK
Sbjct: 280 RIEPKNPPPPINFQEWDGLVRIAFVRKNKTLSAAFK 315
>gi|154341407|ref|XP_001566655.1| putative ribosomal RNA adenine dimethylase family protein
[Leishmania braziliensis MHOM/BR/75/M2904]
gi|134063980|emb|CAM40171.1| putative ribosomal RNA adenine dimethylase family protein
[Leishmania braziliensis MHOM/BR/75/M2904]
Length = 366
Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 106/224 (47%), Positives = 145/224 (64%), Gaps = 1/224 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+K GQHIL N V+ +IV KS+I P D V+EIGPGTGNLT KLL+ +KKV A EID
Sbjct: 68 IVFNKGFGQHILKNPLVIAAIVEKSAIKPTDVVVEIGPGTGNLTEKLLQTAKKVIAFEID 127
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV LN+R ++ +L +I + L+ +FP FD VAN+PY ISS LV KL+ T +
Sbjct: 128 PRMVAELNKRFQNTPLASKLQIIRGNCLEQDFPYFDKCVANVPYAISSALVFKLLK-TPT 186
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
F+ A L+ Q+EFA R+ A PG + RL+VN +L+A +M +S+ F P PKV+SSV+
Sbjct: 187 FKCAVLMFQREFALRVCAQPGSEAYCRLSVNSQLLARCSHLMKISRNSFNPPPKVESSVI 246
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIEL 225
+ PK PDV+ +EW + F++KNK + F+ K V L
Sbjct: 247 RLDPKCPPPDVDFEEWDGLVKMLFNRKNKKASSIFRTKVAVQAL 290
>gi|71425341|ref|XP_813086.1| ribosomal RNA adenine dimethylase family protein [Trypanosoma cruzi
strain CL Brener]
gi|70877938|gb|EAN91235.1| ribosomal RNA adenine dimethylase family protein, putative
[Trypanosoma cruzi]
Length = 344
Score = 206 bits (524), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 107/224 (47%), Positives = 144/224 (64%), Gaps = 1/224 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+K GQHIL N V+ +IV K++I P D VLEIGPGTGNLT KLL+ SKKV A E+D
Sbjct: 60 MVFNKGFGQHILKNPLVIAAIVEKAAIKPTDVVLEIGPGTGNLTEKLLQASKKVIAFEVD 119
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV LN+R ++ +L VI + L EFP FD VAN+PY ISS LV KL+ +
Sbjct: 120 SRMVAELNKRFQNTPLASKLQVIRGNCLDHEFPYFDKCVANVPYAISSALVFKLLR-KPT 178
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
F+ A L+ Q+EFA R+ A PG + RL+VN +L+A +M +SK F P PKV+SSV+
Sbjct: 179 FKCAVLMFQREFALRVCAQPGAEAYCRLSVNSQLLARCSHLMKISKNSFNPPPKVESSVI 238
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIEL 225
+ PK PDV+ +EW + F++KNK + + F+ K V L
Sbjct: 239 RLDPKHPAPDVDFEEWDGLVKFIFNRKNKKVSSIFRTKNAVQTL 282
>gi|427777859|gb|JAA54381.1| Putative ribosomal rna adenine dimethylase [Rhipicephalus
pulchellus]
Length = 353
Score = 206 bits (524), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 112/265 (42%), Positives = 149/265 (56%), Gaps = 48/265 (18%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F GQHIL N V++ ++ KS+I P D VLE+GPGTGN+T+KLLE +KKV A E+D
Sbjct: 20 IAFRTELGQHILKNPLVINGMIEKSAIRPTDVVLEVGPGTGNMTVKLLEKAKKVIACEVD 79
Query: 62 ERMV-----------------------------------------EI-------LNRRAA 73
R+V E+ L +R
Sbjct: 80 TRLVAELQKRVQGTHLHSKLHIIVXXXXXNMTVKLLEKAKKVIACEVDTRLVAELQKRVQ 139
Query: 74 DSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLLQKEF 133
+ H +L++I D LK+E P FD+ VAN+PY ISSP V KL+ FR ATL+ Q+EF
Sbjct: 140 GTHLHSKLHIIVGDVLKSELPFFDICVANLPYQISSPFVFKLLLHRPFFRCATLMFQREF 199
Query: 134 ARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAEIPDVN 193
A+RL+A PGD + RL+VN +L+A V+ +M V K +F P PKV+SSVV + P+ P +N
Sbjct: 200 AQRLVAKPGDKLYCRLSVNTQLLARVDILMKVGKNNFRPPPKVESSVVRLEPRNPPPAIN 259
Query: 194 LDEWRAFTRTCFSKKNKTLGATFKQ 218
EW R CF +KNKTL A FKQ
Sbjct: 260 FIEWDGLLRICFVRKNKTLSAAFKQ 284
>gi|401425365|ref|XP_003877167.1| ribosomal RNA adenine dimethylase family protein,putative
[Leishmania mexicana MHOM/GT/2001/U1103]
gi|322493412|emb|CBZ28699.1| ribosomal RNA adenine dimethylase family protein,putative
[Leishmania mexicana MHOM/GT/2001/U1103]
Length = 374
Score = 206 bits (524), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 106/224 (47%), Positives = 145/224 (64%), Gaps = 1/224 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+K GQHIL N V+ +IV K++I P D V+EIGPGTGNLT KLL+ +KKV A EID
Sbjct: 69 IVFNKGFGQHILKNPLVIAAIVEKAAIKPTDIVIEIGPGTGNLTEKLLQTAKKVIAFEID 128
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RM+ LN+R ++ +L +I + L+ +FP FD VAN+PY ISS LV KL+ T +
Sbjct: 129 PRMMAELNKRFQNTPLASKLQIIRGNCLEQDFPYFDKCVANVPYAISSALVFKLLK-TPT 187
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
F+ A L+ Q+EFA R+ A PG + RL+VN +L+A +M +SK F P PKV+SSV+
Sbjct: 188 FKCAVLMFQREFALRVCAQPGSEAYCRLSVNSQLLARCSHLMKISKNSFNPPPKVESSVI 247
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIEL 225
+ PK PDV+ +EW + FS+KNK + F+ K V L
Sbjct: 248 RLDPKHPPPDVDFEEWDGLVKMLFSRKNKKSSSIFRTKAAVQAL 291
>gi|347828726|emb|CCD44423.1| similar to dimethyladenosine transferase [Botryotinia fuckeliana]
Length = 382
Score = 206 bits (523), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 103/223 (46%), Positives = 146/223 (65%), Gaps = 2/223 (0%)
Query: 5 HKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERM 64
+K GQHIL N V ++IV+K+++ P DTVLE+GPGTGNLT+++LE +KKV A+E+D RM
Sbjct: 31 NKDYGQHILKNPGVAEAIVKKANLKPTDTVLEVGPGTGNLTVRILESAKKVIAVEVDPRM 90
Query: 65 VEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRS 124
+ +R RL V+ D +KTE P FD+ ++N PY ISSPLV KL+ R
Sbjct: 91 AAEVTKRVQGKPEQKRLEVLLGDVIKTELPHFDVCISNTPYQISSPLVFKLLSLPNPPRC 150
Query: 125 ATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIR 184
+ L+ Q+EFA RL A PGDS + RL+VN + A + +M V K +F P P+V+SSVV I
Sbjct: 151 SVLMFQREFALRLTARPGDSLYCRLSVNAQFFAKITHIMKVGKNNFRPPPQVESSVVRIE 210
Query: 185 PKA--EIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIEL 225
PK E P V+ +EW R CF +KN+T+ A++ K+V+ +
Sbjct: 211 PKTGKERPGVSWEEWDGMLRICFVRKNRTMRASWLGMKQVLAM 253
>gi|291235880|ref|XP_002737862.1| PREDICTED: Probable dimethyladenosine transferase-like
[Saccoglossus kowalevskii]
Length = 305
Score = 206 bits (523), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 103/223 (46%), Positives = 144/223 (64%), Gaps = 1/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F + GQHIL N V+D I+ K+++ D LE+GPGTGN+T+KLL+ KKV A E+D R
Sbjct: 22 FKRDLGQHILKNPLVVDGIIEKAALRNTDVALEVGPGTGNMTVKLLDKVKKVVACELDPR 81
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
+ + +R + +L +I D LK++ P FD+ VAN+PY ISSP V KL+ FR
Sbjct: 82 LAAEVQKRVQGTPSQTKLQLIIGDVLKSDLPFFDVCVANLPYQISSPFVFKLLLHRPFFR 141
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A L+ Q+EFA+RL+A PGD + RL++N +L+A V+ VM V K +F P PKV+SSVV +
Sbjct: 142 CAVLMFQREFAQRLVAKPGDKLYCRLSINTQLLARVDLVMKVGKNNFRPPPKVESSVVRL 201
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
P+ P +N EW R F++KNKTL A FK V+E+L
Sbjct: 202 EPRNPPPPINFQEWDGLVRIAFTRKNKTLSAAFKH-NSVLEML 243
>gi|440294373|gb|ELP87390.1| dimethyladenosine transferase, putative [Entamoeba invadens IP1]
Length = 295
Score = 205 bits (522), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 105/213 (49%), Positives = 139/213 (65%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
FHKS+GQHIL N + IV + I D VLEIGPGTGNLT+K+L KK+ AIEID R
Sbjct: 12 FHKSEGQHILKNPMIAQQIVDAAEIRRTDVVLEIGPGTGNLTMKILPQCKKLIAIEIDPR 71
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R + + + ++ +I+ D LK + P FD+ V+N PY ISSPLV KL+ FR
Sbjct: 72 MAAELKKRVSITPYVKKIEIITGDFLKVDLPYFDVCVSNTPYSISSPLVFKLLNHRPQFR 131
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
SA L+ Q+EFA RL+A+P D + RL VN L+AD+ VM V + +F P PKV+SSVV +
Sbjct: 132 SAVLMFQREFALRLVATPEDPLYCRLTVNTHLLADIYHVMKVGRNNFKPPPKVESSVVRM 191
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATF 216
P P +NL E+ F R CF +K+KTL + F
Sbjct: 192 VPVKPAPQINLVEFDGFLRICFLRKHKTLKSLF 224
>gi|402087269|gb|EJT82167.1| hypothetical protein GGTG_02141 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 412
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 106/224 (47%), Positives = 147/224 (65%), Gaps = 2/224 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K GQHIL N + + IV+K+ + P DTVLE+GPGTGNL++K+LE + ++ A+E+D R
Sbjct: 40 FKKDYGQHILKNPGIAEEIVKKAFLRPTDTVLEVGPGTGNLSVKILERAARLVAVELDPR 99
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R +L VI D +K E P FD++++N PY ISSPLV K++ R
Sbjct: 100 MGAELTKRVQGRPEQRKLEVILGDVIKAELPPFDVLISNTPYQISSPLVFKVLALPNPPR 159
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A L+ Q+EFA RL A PGDS ++RL+VNV+L + V +M V K +F P P+V+SSVV I
Sbjct: 160 CAVLMFQREFASRLTAQPGDSLYSRLSVNVQLFSKVTHIMKVGKGNFKPPPQVESSVVRI 219
Query: 184 RPKA--EIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIEL 225
PK E P V+ DEW R CF++KNKTL A+F K+V+ +
Sbjct: 220 EPKTGRERPQVSWDEWDGMLRVCFNRKNKTLHASFLGVKEVLAM 263
>gi|156055498|ref|XP_001593673.1| hypothetical protein SS1G_05101 [Sclerotinia sclerotiorum 1980]
gi|154702885|gb|EDO02624.1| hypothetical protein SS1G_05101 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 383
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/224 (45%), Positives = 146/224 (65%), Gaps = 2/224 (0%)
Query: 5 HKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERM 64
+K GQHIL N V ++IV+K+++ P DTVLE+GPGTGNLT+++LE +KKV A+E+D RM
Sbjct: 31 NKDYGQHILKNPGVAEAIVKKANLKPTDTVLEVGPGTGNLTVRILESAKKVIAVEVDPRM 90
Query: 65 VEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRS 124
+ +R RL V+ D +KTE P FD+ ++N PY ISSPLV KL+ R
Sbjct: 91 AAEVTKRVQGKPEQKRLEVLLGDVIKTELPHFDVCISNTPYQISSPLVFKLLSLPNPPRC 150
Query: 125 ATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIR 184
+ L+ Q+EFA RL A PGDS + RL+VN + A + +M V K +F P P+V+SSVV I
Sbjct: 151 SVLMFQREFALRLTARPGDSLYCRLSVNAQFFAKITHIMKVGKNNFRPPPQVESSVVRIE 210
Query: 185 PKA--EIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
PK E P V+ +EW R CF +KN+T+ A++ K+V+ +
Sbjct: 211 PKTGKERPGVSWEEWDGMLRICFVRKNRTMRASWLGMKQVLAMC 254
>gi|302914906|ref|XP_003051264.1| hypothetical protein NECHADRAFT_41763 [Nectria haematococca mpVI
77-13-4]
gi|256732202|gb|EEU45551.1| hypothetical protein NECHADRAFT_41763 [Nectria haematococca mpVI
77-13-4]
Length = 332
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/225 (45%), Positives = 148/225 (65%), Gaps = 2/225 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ + GQHIL N V D+IV K+ + P DTVLE+GPGTGNLT+++LE +KK +E+D R
Sbjct: 39 FNTNFGQHILKNPGVSDAIVEKAFLKPTDTVLEVGPGTGNLTVRILERAKKCICVEVDPR 98
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M + +R + +L V+ D +KTE PQFD+ ++N PY ISSPLV KL+ R
Sbjct: 99 MAAEVTKRVQGTPEQRKLEVLLGDVIKTELPQFDVCISNTPYQISSPLVFKLLSLPNPPR 158
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
++ L+ Q+EFA RL A PGD+ + RL+VN + A + +M V K +F P P+V+SSVV I
Sbjct: 159 TSVLMFQREFALRLTARPGDALYCRLSVNAQFWAKITHIMKVGKNNFRPPPQVESSVVRI 218
Query: 184 RPKA--EIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
PK + P+V+ DEW R CF +KNKTL A++ K+V+ ++
Sbjct: 219 EPKTGKDRPNVSWDEWDGLLRVCFVRKNKTLRASWLGTKEVLAMV 263
>gi|226480668|emb|CAX73431.1| DIM1 dimethyladenosine transferase 1-like protein [Schistosoma
japonicum]
Length = 313
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/219 (46%), Positives = 142/219 (64%), Gaps = 1/219 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F +KGQHIL N V+ +++ KS I D+VLEIG GTGNLT+KLLE +KV+A EID
Sbjct: 18 IRFQTTKGQHILKNPLVITTMIEKSGIKSTDSVLEIGSGTGNLTVKLLEKGRKVYAFEID 77
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALK-TEFPQFDLVVANIPYGISSPLVAKLVYGTK 120
R+V L +R S +L ++ DA+K T +P+FDL VAN+PY ISSP + +L++ +
Sbjct: 78 PRLVSELQKRVQTSPHRSKLEILVGDAVKATSWPKFDLCVANLPYKISSPFIQRLIHAGR 137
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
FR+A ++ QKEFA RL A PGD + RL+ + + +E +M +S+ F P P+VDS+V
Sbjct: 138 GFRAAVVMFQKEFADRLTAKPGDKVYCRLSASAQFHFKIEQLMKISRNSFRPPPRVDSAV 197
Query: 181 VIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQK 219
V I P+ +P V EW R F++KNKT+GA K
Sbjct: 198 VRIEPRHPLPPVMHSEWDGLLRLVFARKNKTIGANLGGK 236
>gi|340054016|emb|CCC48310.1| putative conserved ribosomal RNA adenine dimethylase family protein
[Trypanosoma vivax Y486]
Length = 387
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/224 (47%), Positives = 144/224 (64%), Gaps = 1/224 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+K GQHIL N V+ +IV K++I P D VLEIGPGTGNLT KLL+ +KKV A E+D
Sbjct: 103 IVFNKGFGQHILKNPLVIAAIVEKAAIKPTDIVLEIGPGTGNLTEKLLQTAKKVIAFEVD 162
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV LN+R + +L VI + L+ EFP FD VAN+PY ISS LV KL+ +
Sbjct: 163 PRMVVELNKRFQGTTLATKLQVIRGNCLEHEFPYFDKCVANVPYAISSALVFKLL-KKPN 221
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
F+ A L+ Q+EFA R+ A PG + RL+VN +L+A +M +SK F P PKV+SSV+
Sbjct: 222 FKCAVLMFQREFALRICAQPGSEAYCRLSVNSQLLARCSHLMKISKNSFNPPPKVESSVI 281
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIEL 225
+ PK P+V+ DEW + F++KNK + + F+ K V L
Sbjct: 282 RLDPKHPAPNVDFDEWDGLVKFIFNRKNKKISSIFRTKNAVQTL 325
>gi|50420303|ref|XP_458685.1| DEHA2D05038p [Debaryomyces hansenii CBS767]
gi|52782772|sp|Q6BSY5.1|DIM1_DEBHA RecName: Full=Dimethyladenosine transferase; AltName: Full=18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=18S rRNA dimethylase;
AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|49654352|emb|CAG86824.1| DEHA2D05038p [Debaryomyces hansenii CBS767]
Length = 327
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/214 (47%), Positives = 142/214 (66%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ + GQHIL N V IV K+ I P D VLE+GPGTGNLT+++LE ++KV A E+D R
Sbjct: 32 FNTNLGQHILKNPLVAQGIVDKAGIKPSDIVLEVGPGTGNLTVRILEQARKVIASEMDPR 91
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R + +L+++ D +KTE P FD+ ++N PY ISSPLV KL+ + R
Sbjct: 92 MAAELTKRVHGTPNQKKLDILLGDFIKTELPYFDVCISNTPYQISSPLVFKLLNQPRPPR 151
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ L+ Q+EFA RLLA PGDS + RL+ NV++ A+V +M VSK +F P P+V+SSVV I
Sbjct: 152 VSILMFQREFAMRLLARPGDSLYCRLSANVQMWANVTHIMKVSKNNFRPPPQVESSVVRI 211
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
K P+++ +EW R CF +KNKT+ A FK
Sbjct: 212 EVKVPRPNIDFNEWDGLLRICFVRKNKTIAAGFK 245
>gi|449270344|gb|EMC81029.1| putative dimethyladenosine transferase, partial [Columba livia]
Length = 281
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/215 (48%), Positives = 138/215 (64%)
Query: 3 FFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDE 62
F+ GQHIL N V++SI+ K+++ D VLE+GPGTGNLT+K+LE KKV A EID
Sbjct: 1 LFNTGAGQHILKNPLVVNSIIEKAALRRTDVVLEVGPGTGNLTVKMLEKVKKVIACEIDP 60
Query: 63 RMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSF 122
R+V L +R + ++L + D LK++ P FD VAN+PY ISSP V KL+ F
Sbjct: 61 RLVGELQKRVQGTCLANKLEIKVGDVLKSDLPFFDACVANLPYQISSPFVFKLLLHRPFF 120
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
R A L+ Q+EFA RL+A PG + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 121 RCAILMFQREFALRLVAKPGTKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVVR 180
Query: 183 IRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P +N EW R F +KNKTL A FK
Sbjct: 181 IEPKNPPPPINFQEWDGLVRIAFVRKNKTLSAAFK 215
>gi|146414153|ref|XP_001483047.1| dimethyladenosine transferase [Meyerozyma guilliermondii ATCC 6260]
Length = 497
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/223 (46%), Positives = 146/223 (65%), Gaps = 1/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ + GQHIL N V IV K+ I P D VLE+GPGTGNLT+++LE ++KV A E+D R
Sbjct: 209 FNTNLGQHILKNPLVAQGIVDKAQIKPSDIVLEVGPGTGNLTVRILEQARKVIASEMDPR 268
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R + +L ++ D +KT+ P FD+ ++N PY ISSPLV KL+ + R
Sbjct: 269 MAAELTKRVHGTPQQKKLEILLGDFIKTDLPYFDVCISNTPYQISSPLVFKLLNQPRPPR 328
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ L+ Q+EFA RLLA PGDS + RL+ NV++ A+V +M V K +F P P+V+SSVV I
Sbjct: 329 VSILMFQREFALRLLARPGDSLYCRLSANVQMWANVTHIMKVGKNNFRPPPQVESSVVRI 388
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
K P+++ DEW R CF +KNKT+ A FK + V+E+L
Sbjct: 389 EIKNPRPNIDFDEWDGLLRICFVRKNKTIAAGFKS-QNVLEIL 430
>gi|190348449|gb|EDK40904.2| dimethyladenosine transferase [Meyerozyma guilliermondii ATCC 6260]
Length = 497
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/223 (46%), Positives = 146/223 (65%), Gaps = 1/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ + GQHIL N V IV K+ I P D VLE+GPGTGNLT+++LE ++KV A E+D R
Sbjct: 209 FNTNLGQHILKNPLVAQGIVDKAQIKPSDIVLEVGPGTGNLTVRILEQARKVIASEMDPR 268
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R + +L ++ D +KT+ P FD+ ++N PY ISSPLV KL+ + R
Sbjct: 269 MAAELTKRVHGTPQQKKLEILLGDFIKTDLPYFDVCISNTPYQISSPLVFKLLNQPRPPR 328
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ L+ Q+EFA RLLA PGDS + RL+ NV++ A+V +M V K +F P P+V+SSVV I
Sbjct: 329 VSILMFQREFALRLLARPGDSLYCRLSANVQMWANVTHIMKVGKNNFRPPPQVESSVVRI 388
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
K P+++ DEW R CF +KNKT+ A FK + V+E+L
Sbjct: 389 EIKNPRPNIDFDEWDGLLRICFVRKNKTIAAGFKS-QNVLEIL 430
>gi|322699660|gb|EFY91420.1| dimethyladenosine transferase dimethyltransferase [Metarhizium
acridum CQMa 102]
Length = 390
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 102/225 (45%), Positives = 148/225 (65%), Gaps = 2/225 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ + GQHIL N V D+IV K+ + P DTVLEIGPGTGNLT+++LE +KK +E+D R
Sbjct: 38 FNTNFGQHILKNPGVSDAIVEKAYLKPTDTVLEIGPGTGNLTVRILERAKKCICVELDPR 97
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M + +R + +L V+ D +KTE PQFD+ ++N PY ISSPLV KL+ R
Sbjct: 98 MAAEVTKRVQGTPEQRKLEVVLGDVIKTELPQFDVCISNTPYQISSPLVFKLLAMPNPPR 157
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
++ L+ Q+EFA RL A PGD ++R++VN + A + +M V K +F P P+V+SSVV I
Sbjct: 158 TSVLMFQREFALRLTARPGDPLYSRISVNAQFWAKITHIMKVGKNNFRPPPQVESSVVRI 217
Query: 184 RPKA--EIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
PK + P+V+ DEW R CF +KNKTL A++ ++V+ ++
Sbjct: 218 EPKVGKDRPNVSWDEWDGLLRVCFVRKNKTLRASWLGTREVLTMV 262
>gi|50551823|ref|XP_503386.1| YALI0E00770p [Yarrowia lipolytica]
gi|52782774|sp|Q6C7H6.1|DIM1_YARLI RecName: Full=Dimethyladenosine transferase; AltName: Full=18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=18S rRNA dimethylase;
AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|49649255|emb|CAG78965.1| YALI0E00770p [Yarrowia lipolytica CLIB122]
Length = 317
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 135/209 (64%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQHIL N V IV KS I P DTVLE+GPGTGNLT+++LE ++KV A+E+D RM L
Sbjct: 35 GQHILKNPLVAQGIVDKSDIKPSDTVLEVGPGTGNLTVRILEKARKVIAVEMDPRMAAEL 94
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
+R +L ++ D +KTE P FD+ ++N PY ISSPLV KL+ + R + L+
Sbjct: 95 TKRVQGKPEQKKLEIMLGDCIKTELPYFDVCISNTPYQISSPLVFKLLNQPRPPRVSVLM 154
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q EFA RLLA PGDS + RL+VNV++ A V VM V + +F P P V+SSVV I K
Sbjct: 155 FQHEFAMRLLARPGDSLYCRLSVNVQMWAKVSHVMKVGRGNFRPPPNVESSVVKIEVKNP 214
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
P ++ +EW R CF +KNKT+ A FK
Sbjct: 215 RPPIDFNEWDGLLRVCFVRKNKTINAGFK 243
>gi|448122490|ref|XP_004204462.1| Piso0_000311 [Millerozyma farinosa CBS 7064]
gi|358350001|emb|CCE73280.1| Piso0_000311 [Millerozyma farinosa CBS 7064]
Length = 325
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 103/223 (46%), Positives = 146/223 (65%), Gaps = 1/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ + GQHIL N V IV K+++ P D VLEIGPGTGNLT+++LE +++V A E+D R
Sbjct: 31 FNTNLGQHILKNPLVAQGIVDKANLKPSDVVLEIGPGTGNLTVRILEQARRVIASEMDPR 90
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L++R + +L +I D +K E P FD+ ++N PY ISSPLV KL+ + R
Sbjct: 91 MAAELSKRVRGTPHEKKLEIILGDFIKAELPYFDVCISNTPYQISSPLVFKLLNSPRPPR 150
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ L+ Q+EFA RL+A PGDS + RL+ NV++ A+V +M V + F P P+VDSSVV I
Sbjct: 151 VSILMFQREFAMRLVARPGDSLYCRLSANVQMWANVTHIMKVGRNSFRPPPQVDSSVVRI 210
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
K+ PD++ +EW R CF +KNKT+ A FK VI++L
Sbjct: 211 EIKSPRPDIDFNEWDGLLRICFVRKNKTIAAGFKS-NNVIDIL 252
>gi|332021836|gb|EGI62176.1| Putative dimethyladenosine transferase [Acromyrmex echinatior]
Length = 266
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 102/204 (50%), Positives = 135/204 (66%)
Query: 22 IVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRL 81
+V K+++ P D VLEIGPGTGN+T+K+LE +KKV A EID RM+ L +R + +L
Sbjct: 1 MVEKAALRPTDVVLEIGPGTGNMTVKMLEKAKKVVACEIDPRMIAELQKRVQGTIHQSKL 60
Query: 82 NVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASP 141
++ D LK++ P FDL VANIPY ISSPLV KL+ FR A L+ Q+EFA RL+A P
Sbjct: 61 QIVYGDVLKSDLPFFDLCVANIPYQISSPLVFKLLSHRPLFRCAVLMFQREFAERLVAKP 120
Query: 142 GDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAEIPDVNLDEWRAFT 201
GD + RL++N +L+A V+ +M V K +F P PKV+S+VV I P+ P +N EW T
Sbjct: 121 GDKLYCRLSINTQLLARVDMLMKVGKNNFRPPPKVESNVVRIEPRNPPPPINYQEWDGLT 180
Query: 202 RTCFSKKNKTLGATFKQKKKVIEL 225
R F +KNKTL A FKQ V L
Sbjct: 181 RIAFVRKNKTLSAAFKQTTVVTML 204
>gi|428181600|gb|EKX50463.1| hypothetical protein GUITHDRAFT_135139 [Guillardia theta CCMP2712]
Length = 320
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 106/222 (47%), Positives = 144/222 (64%), Gaps = 2/222 (0%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS+GQH L N ++ I+ K+ I D VLEIGPG G LT KLLE +KKV AIE+D R
Sbjct: 23 KSRGQHFLANPLIIQGIIDKADIRATDVVLEIGPGNGALTAKLLEKAKKVIAIELDTRWA 82
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSA 125
L +R ++L +I+ D L+ + P FD+ VAN+PY IS+P+ KL+ FR A
Sbjct: 83 AELQKRFG-VMHGNKLEIINNDVLRVDLPFFDICVANLPYQISAPITNKLLMHRPQFRCA 141
Query: 126 TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP 185
L+ Q+EFA RL A PGD + RL++N L+A+V+ ++ V K +F P PKV+SSVV I P
Sbjct: 142 VLMFQREFALRLCAKPGDELYCRLSLNTSLLAEVQHLIKVGKNNFKPPPKVESSVVRITP 201
Query: 186 KAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLR 227
++ P +N EW R F +KNKTLGATF+Q K VI+LL+
Sbjct: 202 RSNPPAINYMEWDGLIRLAFGRKNKTLGATFRQ-KDVIDLLK 242
>gi|297743975|emb|CBI36945.3| unnamed protein product [Vitis vinifera]
Length = 284
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 110/225 (48%), Positives = 136/225 (60%), Gaps = 26/225 (11%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ FHKSKGQHIL N ++DSIV KS I D +LEIGPGTGNLT KLLE K V A+E+D
Sbjct: 25 VTFHKSKGQHILKNPLLVDSIVEKSGIKSTDVILEIGPGTGNLTKKLLEAGKSVIAVEVD 84
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV L RR + +RL VI D L+ + P FD+ VANIPY ISSPL KL+
Sbjct: 85 PRMVLELQRRFQGTPLSNRLKVIQGDVLRCDLPYFDICVANIPYQISSPLTFKLLAHRPV 144
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A ++ Q+EFA RL+A PGD+ + RL+ VDSSVV
Sbjct: 145 FRCAVIMFQREFAMRLVAQPGDNLYCRLS-------------------------VDSSVV 179
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
I P+ +P VN EW R CF++KNKTLG+ F+Q K V+ LL
Sbjct: 180 RIEPRKPLPPVNFKEWDGLVRLCFNRKNKTLGSIFRQ-KSVLSLL 223
>gi|406860639|gb|EKD13696.1| dimethyladenosine transferase dimethyltransferase [Marssonina
brunnea f. sp. 'multigermtubi' MB_m1]
Length = 382
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 103/225 (45%), Positives = 147/225 (65%), Gaps = 2/225 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ + GQHIL N V ++IV K+++ P D VLE+GPGTGNLT+++LE +KKV A+E+D R
Sbjct: 32 FNTNVGQHILKNPGVAEAIVAKANLKPTDVVLEVGPGTGNLTVRILEKAKKVIAVELDPR 91
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M + +R RL V+ D +KTE P FD+ ++N PY ISSPLV KL+ R
Sbjct: 92 MAAEVTKRVQGKPEQKRLEVLLGDVIKTELPHFDVCISNTPYQISSPLVFKLLALPNPPR 151
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
++ L+ Q+EFA RL A PGD + RL+VN + + + +M V K +F P P+V+SSVV I
Sbjct: 152 TSILMFQREFALRLTARPGDPLYCRLSVNAQFFSKITHIMKVGKNNFRPPPQVESSVVRI 211
Query: 184 RPK--AEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
PK AE P V+ DEW R CF +KN+T+ A++ K+V+ +L
Sbjct: 212 EPKMGAERPGVSWDEWDGMLRICFVRKNRTMRASWLGTKEVLAML 256
>gi|260943356|ref|XP_002615976.1| dimethyladenosine transferase [Clavispora lusitaniae ATCC 42720]
gi|238849625|gb|EEQ39089.1| dimethyladenosine transferase [Clavispora lusitaniae ATCC 42720]
Length = 322
Score = 203 bits (517), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 103/223 (46%), Positives = 145/223 (65%), Gaps = 1/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ + GQHIL N V IV K+ I P D VLE+GPGTGNLT+++LE ++KV A+E+D R
Sbjct: 30 FNTNLGQHILKNPLVAQGIVDKAQIKPSDIVLEVGPGTGNLTVRILEQARKVVAVEMDPR 89
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R + +L ++ D +KT+ P FD+ ++N PY ISSPLV KL+ K R
Sbjct: 90 MAAELTKRVHGTPQQKKLEILLGDFMKTDLPYFDVCISNTPYQISSPLVFKLLNQPKPPR 149
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ L+ Q+EFA RLLA PGD + RL+ NV++ A+V +M V K +F P P+V+SSVV I
Sbjct: 150 VSILMFQREFALRLLARPGDGLYCRLSANVQMWANVTHIMKVGKNNFRPPPQVESSVVRI 209
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
K P+++ +EW R CF +KNKT+ A FK V+E+L
Sbjct: 210 EVKQPRPNIDFNEWDGLLRICFVRKNKTIAAGFKS-NNVLEIL 251
>gi|346326075|gb|EGX95671.1| dimethyladenosine transferase [Cordyceps militaris CM01]
Length = 391
Score = 203 bits (517), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 103/225 (45%), Positives = 147/225 (65%), Gaps = 2/225 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ + GQHIL N V D+IV K+ + P DTVLE+GPGTGNLT+++LE +KK +E+D R
Sbjct: 41 FNTNFGQHILKNPGVSDAIVEKAYLKPTDTVLEVGPGTGNLTIRILERAKKCICVEVDPR 100
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M + +R + +L V+ D +KTE P FD+ ++N PY ISSPLV KL+ R
Sbjct: 101 MAAEVTKRVQGTPEQRKLEVLLGDVIKTELPPFDVCISNTPYQISSPLVFKLLAMPNPPR 160
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
++ L+ Q+EFA RL A PGD+ + RL+VN + A + VM V K +F P P+V+SSVV I
Sbjct: 161 TSILMFQREFALRLTARPGDTLYCRLSVNAQFWARITHVMKVGKNNFRPPPQVESSVVRI 220
Query: 184 RPKA--EIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
PK + P+V+ DEW R CF +KNKTL A++ K+V+ ++
Sbjct: 221 EPKVGKDRPNVSWDEWDGLLRVCFVRKNKTLRASWLGTKEVLAMV 265
>gi|448124804|ref|XP_004205020.1| Piso0_000311 [Millerozyma farinosa CBS 7064]
gi|358249653|emb|CCE72719.1| Piso0_000311 [Millerozyma farinosa CBS 7064]
Length = 325
Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 103/223 (46%), Positives = 146/223 (65%), Gaps = 1/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ + GQHIL N V IV K+++ P D VLEIGPGTGNLT+++LE +++V A E+D R
Sbjct: 31 FNTNLGQHILKNPLVAQGIVDKANLKPSDIVLEIGPGTGNLTVRILEQARRVIASEMDPR 90
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L++R + +L +I D +K E P FD+ ++N PY ISSPLV KL+ + R
Sbjct: 91 MAAELSKRVRGTPHEKKLEIILGDFIKAELPYFDVCISNTPYQISSPLVFKLLNQPRPPR 150
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ L+ Q+EFA RL+A PGDS + RL+ NV++ A+V +M V + F P P+VDSSVV I
Sbjct: 151 VSILMFQREFAMRLVARPGDSLYCRLSANVQMWANVTHIMKVGRNSFRPPPQVDSSVVRI 210
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
K+ PD++ +EW R CF +KNKT+ A FK VI++L
Sbjct: 211 EIKSPRPDIDFNEWDGLLRICFVRKNKTIAAGFKS-NNVIDIL 252
>gi|400599942|gb|EJP67633.1| dimethyladenosine transferase [Beauveria bassiana ARSEF 2860]
Length = 386
Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 102/225 (45%), Positives = 148/225 (65%), Gaps = 2/225 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ + GQHIL N V D+IV K+ + P DTVLE+GPGTGNL++++LE +KK+ +E+D R
Sbjct: 38 FNTNFGQHILKNPGVADAIVEKAYLKPTDTVLEVGPGTGNLSVRILERAKKLICVEVDPR 97
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M + +R + +L V+ D +KTE P FD+ ++N PY ISSPLV KL+ R
Sbjct: 98 MAAEVTKRVQGTPEQRKLEVLLGDVIKTELPAFDVCISNTPYQISSPLVFKLLAMPNPPR 157
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
++ L+ Q+EFA RL A PGD+ + RL+VN + A + VM V K +F P P+V+SSVV I
Sbjct: 158 TSVLMFQREFALRLTARPGDTLYCRLSVNAQFWARITHVMKVGKNNFRPPPQVESSVVRI 217
Query: 184 RPKA--EIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
PK + P+V+ DEW R CF +KNKTL A++ K+V+ ++
Sbjct: 218 EPKVGKDRPNVSWDEWDGLLRVCFVRKNKTLRASWLGTKEVLAMV 262
>gi|322710252|gb|EFZ01827.1| dimethyladenosine transferase dimethyltransferase [Metarhizium
anisopliae ARSEF 23]
Length = 388
Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 102/225 (45%), Positives = 148/225 (65%), Gaps = 2/225 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ + GQHIL N V D+IV K+ + P DTVLEIGPGTGNLT+++LE +KK +E+D R
Sbjct: 38 FNTNFGQHILKNPGVSDAIVEKAYLKPTDTVLEIGPGTGNLTVRILERAKKCICVELDPR 97
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M + +R + +L VI D +KTE PQFD+ ++N PY ISSPLV KL+ R
Sbjct: 98 MAAEVTKRVQGTPEQRKLEVILGDVIKTELPQFDVCISNTPYQISSPLVFKLLAMPNPPR 157
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
++ L+ Q+EFA RL A PG+ ++R++VN + A + +M V K +F P P+V+SSVV I
Sbjct: 158 TSVLMFQREFALRLTARPGEPLYSRISVNAQFWAKITHIMKVGKNNFRPPPQVESSVVRI 217
Query: 184 RPKA--EIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
PK + P+V+ DEW R CF +KNKTL A++ ++V+ ++
Sbjct: 218 EPKVGKDRPNVSWDEWDGLLRVCFVRKNKTLRASWLGTREVLTMV 262
>gi|429965694|gb|ELA47691.1| dimethyladenosine transferase [Vavraia culicis 'floridensis']
Length = 266
Score = 203 bits (516), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 105/235 (44%), Positives = 157/235 (66%), Gaps = 12/235 (5%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I + K GQHIL N ++D+I+ +++I DTVLEIG GTGNLT+KLL +K+V E D
Sbjct: 3 IRYKKDLGQHILKNPGIIDTIIERANILETDTVLEIGSGTGNLTIKLLAKAKRVICYEKD 62
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
ERM L +R ++ + D +K++FP FDL V+NIPY ISS L+ KL +G +
Sbjct: 63 ERMAAELVKRVKSLNLCHKMKLFVGDCMKSDFPHFDLCVSNIPYQISSVLIFKL-FGY-N 120
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR+A L+LQ EFA RL+A+PG+ +++RL+V+ +L + VE++ VS+++F P PKV+S+VV
Sbjct: 121 FRAAVLMLQHEFALRLVANPGNPDYSRLSVSAQLFSKVEYMFKVSRKNFNPMPKVESAVV 180
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATF----------KQKKKVIELL 226
IR + E P +N++E+ F R CF +KNKTL F K+K+++ E+L
Sbjct: 181 RIRKRLEQPSINIEEFANFLRICFKRKNKTLSGVFGDKSVIKTVKKEKREIAEIL 235
>gi|50306253|ref|XP_453098.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|52788270|sp|P78697.3|DIM1_KLULA RecName: Full=Dimethyladenosine transferase; AltName: Full=18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=18S rRNA dimethylase;
AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|49642232|emb|CAH00194.1| KLLA0D00594p [Kluyveromyces lactis]
Length = 320
Score = 203 bits (516), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 106/223 (47%), Positives = 142/223 (63%), Gaps = 1/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ GQHIL N V IV K+ I P D VLEIGPGTGNLT+++LE ++KV A+E D R
Sbjct: 31 FNTDLGQHILKNPLVAQGIVDKAQIKPSDIVLEIGPGTGNLTVRILEQARKVVAVEFDPR 90
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R + +L ++ D +KTE P FD+ ++N PY ISSPLV KL+ K R
Sbjct: 91 MAAELTKRVHGTPVEKKLEILLGDFMKTELPYFDVCISNTPYQISSPLVFKLINQPKPPR 150
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ L+ Q+EFA RLLA PGDS + RL+ NV++ A+V +M V K +F P PKV+SSVV I
Sbjct: 151 VSILMFQREFAMRLLARPGDSLYCRLSANVQMWANVTHIMKVGKNNFRPPPKVESSVVRI 210
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
K P V+ +EW R F +KN+T+ A FK V+E+L
Sbjct: 211 EIKNPRPQVDFNEWDGLLRIVFVRKNRTIAAGFKS-TTVLEIL 252
>gi|84996835|ref|XP_953139.1| dimethyladenosine transferase [Theileria annulata strain Ankara]
gi|65304135|emb|CAI76514.1| dimethyladenosine transferase, putative [Theileria annulata]
Length = 377
Score = 202 bits (515), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 106/225 (47%), Positives = 146/225 (64%), Gaps = 2/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F K GQH+L N VLD I++ + I P DTVLEIGPGTGN T++L+ ++KKV AI++D
Sbjct: 68 MIFVKKYGQHMLKNPGVLDKIIKAAEIRPTDTVLEIGPGTGNWTVRLVTLAKKVVAIDVD 127
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RM+ + R G+ + L VI DAL+T FP+FD+ +AN+P+ ISSP + KL+
Sbjct: 128 SRMISEVKNRCFQLGYTN-LEVIEADALRTTFPRFDICMANLPFQISSPFIFKLLSHRPL 186
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FRSA L+ QKEFA RLLAS D ++ RLA+N +L V + +S F P PKVDS VV
Sbjct: 187 FRSAILVFQKEFAERLLASTNDDKYGRLAINTRLFCTVTRICKISAGSFNPPPKVDSMVV 246
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
I P+ + V+ EW R CFS+K +TL + FK K+ V+ +L
Sbjct: 247 KIVPRQQPLVVDFGEWDGMIRICFSRKRRTLRSLFK-KQSVLSIL 290
>gi|124808498|ref|XP_001348329.1| dimethyladenosine transferase, putative [Plasmodium falciparum 3D7]
gi|23497221|gb|AAN36768.1|AE014818_33 dimethyladenosine transferase, putative [Plasmodium falciparum 3D7]
Length = 381
Score = 202 bits (515), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 140/217 (64%), Gaps = 1/217 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ +K GQH+L N +LD I+ + I D VLEIG GTGNLT+KLL ++KKV I+ID
Sbjct: 70 MILYKKHGQHLLKNPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLAKKVITIDID 129
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RM+ + +R G+++ L V DA+KT FP+FD+ ANIPY ISSPL+ KL+
Sbjct: 130 SRMISEVKKRCLYEGYNN-LEVYEGDAIKTVFPKFDVCTANIPYKISSPLIFKLISHRPL 188
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
F+ A L+ QKEFA R+LA+ GDS ++RL +NVKL V V +V++ F P PKVDS +V
Sbjct: 189 FKCAVLMFQKEFAERMLANVGDSNYSRLTINVKLFCKVTKVCNVNRSSFNPPPKVDSVIV 248
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
+ PK N DEW R CFS+K KTL A FK+
Sbjct: 249 KLIPKESSFLTNFDEWDNLLRICFSRKRKTLHAIFKR 285
>gi|407929604|gb|EKG22416.1| Ribosomal RNA adenine methylase transferase [Macrophomina
phaseolina MS6]
Length = 379
Score = 202 bits (514), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 101/223 (45%), Positives = 144/223 (64%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ GQHIL N V +IV K+ + D VLE+GPGTGNLT+K+LE +KKV A+E+D R
Sbjct: 34 FNTDLGQHILKNPGVAQAIVDKADLKQSDVVLEVGPGTGNLTVKILEKAKKVIAVEMDPR 93
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M + +R + RL VI D +KT+ P FD+ ++N PY ISSPL KL+ + R
Sbjct: 94 MAAEVTKRVQGTPAQKRLEVILGDVIKTQLPYFDVCISNTPYQISSPLTFKLLATQPAPR 153
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ L+ Q+EFA RLLA PGD ++R++VN ++ A V+ ++ V K +F P P+V+SSVV I
Sbjct: 154 TLILMFQREFAMRLLAKPGDKLYSRISVNCQMWAKVDHILKVGKNNFNPPPQVESSVVRI 213
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
PK P ++ DEW R CF +KNKTL ++F V+++L
Sbjct: 214 VPKNPRPQISYDEWDGLLRVCFVRKNKTLRSSFFGTSSVMDML 256
>gi|385305949|gb|EIF49891.1| dimethyladenosine transferase [Dekkera bruxellensis AWRI1499]
Length = 324
Score = 202 bits (514), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 102/218 (46%), Positives = 142/218 (65%), Gaps = 1/218 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ + GQHIL N ++ +IV K+ I P D VLEIGPGTGNLT+++LE ++KV AIE+D R
Sbjct: 31 FNTNLGQHILKNPQIAQAIVDKAEIRPSDVVLEIGPGTGNLTMRILEKARKVIAIEVDPR 90
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKT-EFPQFDLVVANIPYGISSPLVAKLVYGTKSF 122
M L +R + +L + D +K E P FD+ ++N PY ISS +V +L+
Sbjct: 91 MAGELLKRVQGTPVEKKLEITVGDFMKMKELPYFDVCISNTPYQISSGIVFRLLEMEHPP 150
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
R A L+ Q+EFA L A PGD+ +NRL+ N ++ A+V+ VM V K +F P PKV+SSVV
Sbjct: 151 RIAVLMFQREFAMNLTARPGDNLYNRLSANAQMWANVKHVMKVGKNNFRPPPKVESSVVK 210
Query: 183 IRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKK 220
+ PK P++N EW R CF++KNKTLGA F+ KK
Sbjct: 211 VIPKIPRPNLNYSEWDGLLRLCFNRKNKTLGAIFRNKK 248
>gi|72389977|ref|XP_845283.1| ribosomal RNA adenine dimethylase family protein, conserved
[Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|62359277|gb|AAX79719.1| ribosomal RNA adenine dimethylase family protein, conserved
[Trypanosoma brucei]
gi|70801818|gb|AAZ11724.1| ribosomal RNA adenine dimethylase family protein, conserved
[Trypanosoma brucei brucei strain 927/4 GUTat10.1]
Length = 344
Score = 202 bits (514), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 104/221 (47%), Positives = 142/221 (64%), Gaps = 1/221 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+K GQHIL N V+ +IV K+++ P D VLEIGPGTGNLT KLL+ +KKV A E+D
Sbjct: 60 MVFNKGFGQHILKNPLVIAAIVEKAAVKPTDIVLEIGPGTGNLTEKLLQAAKKVIAFEVD 119
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV LN+R +S +L VI + L EFP FD VAN+PY ISS LV KL+ +
Sbjct: 120 PRMVAELNKRFQNSPLAPKLQVIRGNCLDHEFPYFDKCVANVPYAISSALVFKLL-KRPN 178
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
F+ A L+ Q+EFA R+ A PG + RL+VN +L+A +M +SK F P PKV+SSV+
Sbjct: 179 FKCAVLMFQREFALRVCAQPGSEAYCRLSVNSQLLARCSHLMKISKNSFNPPPKVESSVI 238
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKV 222
+ PK P V+ +EW + F++KNK + + F+ K V
Sbjct: 239 RLDPKHPAPSVDFEEWDGLVKHIFNRKNKKVSSIFRTKNTV 279
>gi|261328672|emb|CBH11650.1| ribosomal RNA adenine dimethylase family protein,conserved,
putative [Trypanosoma brucei gambiense DAL972]
Length = 383
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 104/221 (47%), Positives = 142/221 (64%), Gaps = 1/221 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+K GQHIL N V+ +IV K+++ P D VLEIGPGTGNLT KLL+ +KKV A E+D
Sbjct: 99 MVFNKGFGQHILKNPLVIAAIVEKAAVKPTDIVLEIGPGTGNLTEKLLQAAKKVIAFEVD 158
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV LN+R +S +L VI + L EFP FD VAN+PY ISS LV KL+ +
Sbjct: 159 PRMVAELNKRFQNSPLAPKLQVIRGNCLDHEFPYFDKCVANVPYAISSALVFKLL-KRPN 217
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
F+ A L+ Q+EFA R+ A PG + RL+VN +L+A +M +SK F P PKV+SSV+
Sbjct: 218 FKCAVLMFQREFALRVCAQPGSEAYCRLSVNSQLLARCSHLMKISKNSFNPPPKVESSVI 277
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKV 222
+ PK P V+ +EW + F++KNK + + F+ K V
Sbjct: 278 RLDPKHPAPSVDFEEWDGLVKHIFNRKNKKVSSIFRTKNTV 318
>gi|256085330|ref|XP_002578875.1| dimethyladenosine transferase [Schistosoma mansoni]
gi|350645835|emb|CCD59597.1| dimethyladenosine transferase, putative [Schistosoma mansoni]
Length = 313
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/219 (46%), Positives = 143/219 (65%), Gaps = 1/219 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F K+KGQHIL N V++++V KS I D++LEIG GTGNLT+KLLE +KV+A EID
Sbjct: 18 IRFQKTKGQHILKNPLVINTMVEKSGIKSTDSLLEIGSGTGNLTVKLLEKGRKVYAFEID 77
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTE-FPQFDLVVANIPYGISSPLVAKLVYGTK 120
RMV L +R S +L ++ DA+K + +P+FDL +AN+PY ISSP + +L+
Sbjct: 78 PRMVSELQKRVQTSLHRTKLEILVGDAIKAKSWPKFDLCIANLPYKISSPFIQRLISAGH 137
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
FR+A ++LQKEFA RL A GD + RL+ + + +E +M +++ F P P+VDS+V
Sbjct: 138 GFRAAVVMLQKEFADRLTAKSGDKLYCRLSASAQFHFKIEQLMKINRNSFRPPPRVDSAV 197
Query: 181 VIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQK 219
V I P+ +P V EW R F++KNKT+GA F K
Sbjct: 198 VRIEPRHPLPPVMHSEWDGLLRLVFARKNKTIGANFSGK 236
>gi|68071473|ref|XP_677650.1| dimethyladenosine transferase [Plasmodium berghei strain ANKA]
gi|56497848|emb|CAH94950.1| dimethyladenosine transferase, putative [Plasmodium berghei]
Length = 381
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/217 (48%), Positives = 140/217 (64%), Gaps = 1/217 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ +K GQH+L N +LD I+ + I D VLEIG GTGNLT+KLL +SKKV I+ID
Sbjct: 71 MILYKKHGQHLLKNPGILDKIIMAAKIKSSDIVLEIGCGTGNLTVKLLPLSKKVITIDID 130
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RM+ + +R G+++ L V DA+KT FP+FD+ ANIPY ISSPL+ KL+
Sbjct: 131 ARMISEVKKRCLYEGYNN-LEVYEGDAIKTIFPKFDVCTANIPYKISSPLIFKLIAHRPL 189
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
F+ A L+ QKEFA R+LA+ GD+ ++RL VNVKL V V +V + F P PKVDS V+
Sbjct: 190 FKCAVLMFQKEFAERMLANVGDNNYSRLTVNVKLFCRVIKVCNVDRSSFNPPPKVDSIVL 249
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
+ PK +N DEW R CFS+K KTL A FK+
Sbjct: 250 KLIPKENNSMINFDEWDNLLRICFSRKRKTLHAIFKR 286
>gi|255728801|ref|XP_002549326.1| dimethyladenosine transferase [Candida tropicalis MYA-3404]
gi|240133642|gb|EER33198.1| dimethyladenosine transferase [Candida tropicalis MYA-3404]
Length = 324
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/223 (45%), Positives = 146/223 (65%), Gaps = 1/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ + GQHIL N V IV K+ I P D VLE+GPGTGNLT+++LE ++KV A+E+D R
Sbjct: 32 FNTNLGQHILKNPLVAQGIVDKAQIRPSDVVLEVGPGTGNLTVRILEKARKVVAVEMDPR 91
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R + +L ++ D +KTE P FD+ ++N PY ISSPLV KL+ + R
Sbjct: 92 MAAELTKRVHGTPQEKKLEILLGDFMKTELPYFDICISNTPYQISSPLVFKLLNQPRPPR 151
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ L+ Q+EFA+RL+A PG+ + RL+ NV++ A+V +M V K +F P P+V+SSVV I
Sbjct: 152 VSILMFQREFAQRLVARPGEELYCRLSANVQMWANVTHIMKVGKNNFRPPPQVESSVVRI 211
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
K P+V+ +EW R CF +KNKT+ A FK VI++L
Sbjct: 212 EVKNPRPNVDFNEWDGLLRICFVRKNKTIAAGFKS-NNVIDIL 253
>gi|82753583|ref|XP_727737.1| dimethyladenosine transferase [Plasmodium yoelii yoelii 17XNL]
gi|23483724|gb|EAA19302.1| dimethyladenosine transferase, putative [Plasmodium yoelii yoelii]
Length = 394
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/217 (48%), Positives = 140/217 (64%), Gaps = 1/217 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ +K GQH+L N +LD I+ + I D VLEIG GTGNLT+KLL ++KKV I+ID
Sbjct: 44 MILYKKHGQHLLKNPGILDKIIMAAKIKSSDIVLEIGCGTGNLTIKLLPLAKKVITIDID 103
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RM+ + +R G+++ L V DA+KT FP+FD+ ANIPY ISSPL+ KL+
Sbjct: 104 ARMISEVKKRCLYEGYNN-LEVYEGDAIKTIFPKFDVCTANIPYKISSPLIFKLIAHRPL 162
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
F+ A L+ QKEFA R+LA+ GDS ++RL VNVKL V V +V + F P PKVDS V+
Sbjct: 163 FKCAVLMFQKEFAERMLANVGDSNYSRLTVNVKLFCRVIKVCNVDRSSFNPPPKVDSIVL 222
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
+ PK +N DEW R CFS+K KTL A FK+
Sbjct: 223 KLIPKENNSMINFDEWDNLLRICFSRKRKTLHAIFKR 259
>gi|198436563|ref|XP_002125054.1| PREDICTED: similar to GF16271, partial [Ciona intestinalis]
Length = 381
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 103/226 (45%), Positives = 145/226 (64%), Gaps = 2/226 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+ GQHIL N +++ +V K+++ DTVLEIGPGTGN+T+K+LE KV A EID
Sbjct: 21 IMFNTGVGQHILKNPLIINGMVEKAALKATDTVLEIGPGTGNMTVKMLEKVNKVIACEID 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTE-FPQFDLVVANIPYGISSPLVAKLVYGTK 120
RM L +R + +L+++ D LK E P F++ VAN+PY ISSP+V KL+
Sbjct: 81 PRMSAELQKRVCGTPLQKKLHLMVGDVLKLESLPFFNVCVANLPYQISSPIVFKLLLHRP 140
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
FR A L+ Q+EFA+RL+A PG+ + RL++N +L+A V+ +M V K +F P PKV+SSV
Sbjct: 141 LFRCAVLMFQREFAQRLVAKPGEKLYCRLSINTQLLARVDLLMKVGKNNFKPPPKVESSV 200
Query: 181 VIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
V I P+ P +N EW R F +KNKTL F+ V+E+L
Sbjct: 201 VRIEPRNPPPPINFTEWDGLVRIAFLRKNKTLSGLFRT-SSVLEML 245
>gi|170595215|ref|XP_001902290.1| Probable dimethyladenosine transferase [Brugia malayi]
gi|158590104|gb|EDP28858.1| Probable dimethyladenosine transferase, putative [Brugia malayi]
Length = 306
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 140/217 (64%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ +GQHIL N ++++IV KS+I DTV E+G GTGNLT+ LL +KKV A EID R
Sbjct: 23 FNIDRGQHILKNPGIVNAIVEKSAIKSTDTVFEVGSGTGNLTVALLGKAKKVIACEIDRR 82
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M+ L +R + +L V D +KTE+P FD+ VAN+PY ISSP V KL+ R
Sbjct: 83 MIAELKKRVIGTSNQQKLEVRQGDVIKTEWPFFDVCVANLPYQISSPFVFKLLLQRPLPR 142
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A L+ QKEFA RLLA PG+ + RL+VNV+ +A VE +M V + +F P PKVDS+VV I
Sbjct: 143 YAVLMFQKEFADRLLAKPGNKLYCRLSVNVQFLAQVEHLMKVKRTEFRPPPKVDSAVVRI 202
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKK 220
P+ P +N EW + R F +KNKTL + FK +
Sbjct: 203 APRNPPPQINFQEWDSLLRIIFLRKNKTLLSLFKNNQ 239
>gi|340515271|gb|EGR45526.1| dimethyladenosine transferase-like protein [Trichoderma reesei
QM6a]
Length = 326
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/225 (45%), Positives = 146/225 (64%), Gaps = 2/225 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ + GQHIL N V D+IV+K+ + P DTVLE+GPGTGNLT+++LE +KK +E+D R
Sbjct: 33 FNTNFGQHILKNPGVSDAIVQKAFLKPTDTVLEVGPGTGNLTVRILEQAKKCICVELDPR 92
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M + +R +L V+ D +KTE P FD+ ++N PY ISSPLV KL+ R
Sbjct: 93 MAAEVTKRVQGKPEQRKLEVLLGDVIKTELPAFDVCISNTPYQISSPLVFKLLSMPNPPR 152
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ L+ Q+EFA RL A PGD+ + RL+VN + A + +M V K +F P P+V+SSVV I
Sbjct: 153 CSVLMFQREFALRLTARPGDALYCRLSVNAQFWAKITHIMKVGKNNFRPPPQVESSVVRI 212
Query: 184 RPKA--EIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
PK + P+V+ DEW R CF +KNKTL A++ K+V+ ++
Sbjct: 213 EPKMGKDRPNVSWDEWDGLLRVCFVRKNKTLRASWLGTKEVLAMV 257
>gi|255948106|ref|XP_002564820.1| Pc22g08040 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591837|emb|CAP98092.1| Pc22g08040 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 386
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/218 (45%), Positives = 140/218 (64%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQH+L N + +IV K+ + D VLEIGPGTGNLT K+LE +KK A+E+D RM +
Sbjct: 38 GQHVLKNPGIAAAIVEKAELKQSDVVLEIGPGTGNLTAKILEKAKKCIAVELDPRMAAEV 97
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
+R + + RL VI D +KTE P FD+ ++N PY ISSPL KL+ + + RS L+
Sbjct: 98 TKRFQSTPYQKRLEVILGDVMKTELPYFDVCISNTPYQISSPLTFKLLATSPAPRSCILM 157
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q+EFA RL A PGD ++RL+VN ++ A ++ +M V K +F P P+V+SSV+ + PK
Sbjct: 158 FQREFALRLFAKPGDKLYSRLSVNAQMWAKIDHIMKVGKNNFKPPPQVESSVIRMVPKNP 217
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
P VN +EW R F +KNKTL ++F ++ELL
Sbjct: 218 RPQVNYEEWDGLLRIVFVRKNKTLRSSFIGTSSIMELL 255
>gi|47226710|emb|CAG07869.1| unnamed protein product [Tetraodon nigroviridis]
Length = 311
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 142/221 (64%), Gaps = 5/221 (2%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+ GQHIL N +++S++ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D
Sbjct: 21 IMFNTGIGQHILKNPLIVNSVIEKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELD 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPL-----VAKLV 116
R+V L +R + ++L ++ D LKT+ P FD+ VAN+PY + + L V KL+
Sbjct: 81 CRLVAELQKRVQCTPMQNKLQILVGDVLKTDLPFFDVCVANLPYQVDTFLFRRRIVFKLL 140
Query: 117 YGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKV 176
FR A L+ Q+EF RL+A PGD + RL++N +L+A V+ +M V K +F P PKV
Sbjct: 141 LHRPFFRCAVLMFQREFPMRLVAPPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKV 200
Query: 177 DSSVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
+SSVV I PK P +N EW R F +KNKTL A FK
Sbjct: 201 ESSVVRIEPKNPPPPINFQEWDGLVRIAFVRKNKTLSAAFK 241
>gi|320583126|gb|EFW97342.1| dimethyladenosine transferase [Ogataea parapolymorpha DL-1]
Length = 319
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/224 (45%), Positives = 146/224 (65%), Gaps = 2/224 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ GQHIL N + IV K+ I P D VLEIGPGTGNLT+++LE ++KV A E+D +
Sbjct: 26 FNTDLGQHILKNPLIAQGIVDKAEIRPSDVVLEIGPGTGNLTVRILEKARKVIASEVDPK 85
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTE-FPQFDLVVANIPYGISSPLVAKLVYGTKSF 122
M L +R + + +L +I D +K E P FD+ ++N PY ISS +V KL+ +
Sbjct: 86 MAAELTKRVQGTPYEKKLEIIMGDFMKLETLPYFDVCISNTPYQISSGIVFKLLSMPRPP 145
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
R A L+ Q+EFA L A PGD+ +NRL+ N ++ A+V+ VM V K +F P PKV+SSVV
Sbjct: 146 RIAVLMFQREFAMNLTARPGDALYNRLSANAQMWANVKHVMKVGKNNFRPPPKVESSVVK 205
Query: 183 IRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
+ PK P+++ +EW R CF++KNKTL ATF+ K++E+L
Sbjct: 206 VEPKIPRPNLDYNEWDGLLRFCFNRKNKTLNATFRN-NKILEIL 248
>gi|221060378|ref|XP_002260834.1| dimethyladenosine transferase [Plasmodium knowlesi strain H]
gi|193810908|emb|CAQ42806.1| dimethyladenosine transferase, putative [Plasmodium knowlesi strain
H]
Length = 384
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 107/217 (49%), Positives = 140/217 (64%), Gaps = 1/217 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ +K GQH+L N +LD I+ + I D VLEIG GTGNLT+KLL ++KKV I+ID
Sbjct: 59 MILYKKHGQHLLKNPGILDKILLAAKIKSSDVVLEIGCGTGNLTVKLLPIAKKVITIDID 118
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV + +R G+++ L V DA+KT FP+FD+ ANIPY ISSPLV KL+
Sbjct: 119 ARMVSEVKKRCLYEGYNN-LEVYEGDAIKTVFPRFDICTANIPYKISSPLVFKLIAHRPL 177
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
F+ A L+ QKEFA R+LA+ GDS ++RL VNVKL V + +V + F P PKVDS ++
Sbjct: 178 FKCAVLMFQKEFAERMLANVGDSNYSRLTVNVKLFCKVIKICNVDRSSFNPPPKVDSVIL 237
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
+ PK VN DEW R CFS+K KTL A FK+
Sbjct: 238 KLIPKENNFFVNFDEWDNLLRICFSRKRKTLHAIFKR 274
>gi|323449377|gb|EGB05265.1| hypothetical protein AURANDRAFT_60268 [Aureococcus anophagefferens]
Length = 312
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 143/221 (64%)
Query: 5 HKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERM 64
+K GQ+ L N ++D+IV ++ + P D+VLEIGPGTGNLT+KLL +KK+ +E D RM
Sbjct: 26 NKDLGQNFLKNPAIVDAIVERAKLQPTDSVLEIGPGTGNLTVKLLAQAKKLTCVEFDRRM 85
Query: 65 VEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRS 124
V + +R + RL ++ D LK P FD+ VAN+PY ISSP + KL+ FRS
Sbjct: 86 VREVAKRVENDPRKHRLEMVHGDVLKVALPYFDVCVANLPYNISSPFLFKLLAHRPHFRS 145
Query: 125 ATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIR 184
A ++ Q+EFA+RL A PGD+ + RL+VN +L+A V ++ V + +F P PKVDS VV I
Sbjct: 146 AVIMFQEEFAQRLSAKPGDALYCRLSVNTQLLAKVTQLIKVGRNNFRPPPKVDSRVVKIE 205
Query: 185 PKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIEL 225
+ P VN EW + CF++KNKTL +TF KK + +L
Sbjct: 206 VRNPPPPVNFVEWDGLVKLCFNRKNKTLRSTFTNKKTLADL 246
>gi|344229760|gb|EGV61645.1| Dimethyladenosine transferase [Candida tenuis ATCC 10573]
Length = 323
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/214 (47%), Positives = 139/214 (64%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ GQHIL N V IV K++I P DTVLE+GPGTGNLT+++LE +K V A+E+D R
Sbjct: 32 FNTDLGQHILKNPLVAQGIVDKAAIRPSDTVLEVGPGTGNLTVRILEQAKNVIAVEMDPR 91
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R + +L ++ D +KTE P FD+ ++N PY ISSPLV KL+ K R
Sbjct: 92 MAAELTKRVHGTPQQKKLEIMLGDFMKTELPYFDVCISNTPYQISSPLVFKLLNQPKPPR 151
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ L+ Q+EFA RLLA PG+ + RL+ NV++ A+V +M V K +F P PKV+SSVV I
Sbjct: 152 VSILMFQREFAMRLLARPGEELYCRLSANVQMWANVTHIMKVGKNNFRPPPKVESSVVRI 211
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
K+ P+++ EW R F +KNKT+ A FK
Sbjct: 212 EVKSPRPNIDFGEWDGLLRIVFVRKNKTIAAGFK 245
>gi|296813149|ref|XP_002846912.1| dimethyladenosine transferase dimethyltransferase [Arthroderma otae
CBS 113480]
gi|238842168|gb|EEQ31830.1| dimethyladenosine transferase dimethyltransferase [Arthroderma otae
CBS 113480]
Length = 376
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 100/218 (45%), Positives = 139/218 (63%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQH+L N V +IV K+ + DTVLE+GPG+GNLT+K+LE +KKV A+E+D RM L
Sbjct: 40 GQHVLKNPGVAQAIVDKADLKQSDTVLEVGPGSGNLTVKILEKAKKVIAVELDPRMAAEL 99
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
+R RL V+ D +KTE P FD+ ++N PY ISSPL KL+ T + R L+
Sbjct: 100 TKRVQGKPEQKRLEVLLGDVMKTEVPYFDVCISNTPYQISSPLTFKLLATTPAPRVCILM 159
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q+EFA RL A PGD ++RL+VN ++ A ++ +M V K +F P P V+SSVV I PK
Sbjct: 160 FQREFAMRLFAKPGDKLYSRLSVNAQMWAKIDHIMKVGKNNFKPPPAVESSVVRIVPKVP 219
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
PD++ +EW R F +KNKTL ++F V+ +L
Sbjct: 220 RPDISYEEWDGLLRIAFVRKNKTLRSSFLGTSSVVSML 257
>gi|110590504|pdb|2H1R|A Chain A, Crystal Structure Of A Dimethyladenosine Transferase From
Plasmodium Falciparum
gi|110590505|pdb|2H1R|B Chain B, Crystal Structure Of A Dimethyladenosine Transferase From
Plasmodium Falciparum
Length = 299
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 104/211 (49%), Positives = 138/211 (65%), Gaps = 1/211 (0%)
Query: 8 KGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEI 67
+GQH+L N +LD I+ + I D VLEIG GTGNLT+KLL ++KKV I+ID RM+
Sbjct: 20 QGQHLLKNPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISE 79
Query: 68 LNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATL 127
+ +R G+++ L V DA+KT FP+FD+ ANIPY ISSPL+ KL+ F+ A L
Sbjct: 80 VKKRCLYEGYNN-LEVYEGDAIKTVFPKFDVCTANIPYKISSPLIFKLISHRPLFKCAVL 138
Query: 128 LLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKA 187
+ QKEFA R+LA+ GDS ++RL +NVKL V V +V++ F P PKVDS +V + PK
Sbjct: 139 MFQKEFAERMLANVGDSNYSRLTINVKLFCKVTKVCNVNRSSFNPPPKVDSVIVKLIPKE 198
Query: 188 EIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
N DEW R CFS+K KTL A FK+
Sbjct: 199 SSFLTNFDEWDNLLRICFSRKRKTLHAIFKR 229
>gi|156102204|ref|XP_001616795.1| dimethyladenosine transferase [Plasmodium vivax Sal-1]
gi|148805669|gb|EDL47068.1| dimethyladenosine transferase, putative [Plasmodium vivax]
Length = 417
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 140/217 (64%), Gaps = 1/217 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ +K GQH+L N +LD I+ + I D VLEIG GTGNLT+KLL ++KKV I+ID
Sbjct: 78 MILYKKHGQHLLKNPGILDKILLAAKIKSSDVVLEIGCGTGNLTVKLLPIAKKVITIDID 137
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV + +R G+++ L V DA+KT FP+FD+ ANIPY ISSPL+ KL+
Sbjct: 138 ARMVSEVKKRCLYEGYNN-LEVYEGDAIKTVFPRFDICTANIPYKISSPLIFKLIAHRPL 196
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
F+ A L+ QKEFA R+LA+ GDS ++RL VNVKL V + +V + F P PKVDS ++
Sbjct: 197 FKCAVLMFQKEFADRMLANVGDSNYSRLTVNVKLFCKVVKICNVDRSSFNPPPKVDSVIL 256
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
+ PK +N DEW R CFS+K KTL A FK+
Sbjct: 257 KLIPKENNFFINFDEWDNLLRICFSRKRKTLHAIFKR 293
>gi|380476270|emb|CCF44804.1| dimethyladenosine transferase [Colletotrichum higginsianum]
Length = 379
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 105/225 (46%), Positives = 147/225 (65%), Gaps = 2/225 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ + GQHIL N V D+IV K+ + P DTVLEIGPGTGNLT+++LE SKK+ AIE D R
Sbjct: 32 FNTNVGQHILKNPGVADAIVHKAGLKPTDTVLEIGPGTGNLTVRILEKSKKLIAIEFDPR 91
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M + +R + +L V+ DA+K E+ FD++++N PY ISSPLV K++ K R
Sbjct: 92 MAAEVTKRVQGTPEQRKLEVMLGDAIKVEWVPFDVLISNTPYQISSPLVFKMLAMPKPPR 151
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A L+ Q EF +RL+A PGD + RL+VN A VM VSK +F P P+VDS VV I
Sbjct: 152 QAILMFQLEFGQRLVAKPGDKLYGRLSVNANFWATCSNVMKVSKANFRPPPQVDSCVVRI 211
Query: 184 RPK--AEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
PK AE P + +E+ R CF++KN+T+ A++ K+V+++L
Sbjct: 212 VPKQGAERPTIAFEEFDGLLRVCFNRKNRTMRASWLGTKEVLQML 256
>gi|156838911|ref|XP_001643153.1| hypothetical protein Kpol_449p12 [Vanderwaltozyma polyspora DSM
70294]
gi|156113749|gb|EDO15295.1| hypothetical protein Kpol_449p12 [Vanderwaltozyma polyspora DSM
70294]
Length = 319
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 102/223 (45%), Positives = 145/223 (65%), Gaps = 1/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ GQHIL N V IV K++I P D VLE+GPGTGNLT+++LE ++KV A+E+D R
Sbjct: 31 FNTDLGQHILKNPLVAQGIVDKANIKPSDIVLEVGPGTGNLTVRILEQARKVVAVEMDPR 90
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R + +L ++ D +KTE P FD+ ++N PY ISSPLV KL+ + R
Sbjct: 91 MAAELTKRVHGTPAEKKLEIMLGDFMKTELPYFDICISNTPYQISSPLVFKLINQPRPPR 150
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ L+ Q+EFA RLLA PGDS + RL+ NV++ A+V +M V + +F P P+V+SSVV I
Sbjct: 151 VSILMFQREFALRLLARPGDSLYCRLSANVQMWANVTHIMKVGRNNFRPPPQVESSVVRI 210
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
K P+V+ +EW R F +KN+T+ A FK V+E+L
Sbjct: 211 EIKNPRPEVDFNEWDGLLRIVFVRKNRTIAAGFKS-TSVLEIL 252
>gi|403218367|emb|CCK72858.1| hypothetical protein KNAG_0L02440 [Kazachstania naganishii CBS
8797]
Length = 317
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 103/223 (46%), Positives = 144/223 (64%), Gaps = 1/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ GQHIL N V IV K+ I P D VLE+GPGTGNLT+++LE +KKV A+E+D R
Sbjct: 30 FNTDLGQHILKNPLVAQGIVDKAHIKPSDIVLEVGPGTGNLTVRILEKAKKVVAVEMDPR 89
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R + +L+++ D +KTE P FD+ ++N PY ISSPLV KL+ + R
Sbjct: 90 MAAELTKRVHGTPAEKKLDIMLGDFMKTELPYFDICISNTPYQISSPLVFKLINQPRPPR 149
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ L+ Q+EFA RLLA PGDS + RL+ NV++ A+V +M V + +F P P+V+SSVV I
Sbjct: 150 VSILMFQREFAMRLLARPGDSLYCRLSANVQMWANVTHIMKVGRNNFRPPPQVESSVVRI 209
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
K P V+ +EW R F +KN+T+ A FK V+E+L
Sbjct: 210 EIKNPRPQVDFNEWDGLLRIVFVRKNRTISAGFKS-TTVLEIL 251
>gi|315050182|ref|XP_003174465.1| dimethyladenosine transferase dimethyltransferase [Arthroderma
gypseum CBS 118893]
gi|311339780|gb|EFQ98982.1| dimethyladenosine transferase dimethyltransferase [Arthroderma
gypseum CBS 118893]
Length = 377
Score = 200 bits (509), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 100/218 (45%), Positives = 139/218 (63%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQH+L N V +IV K+ + DTVLE+GPG+GNLT+K+LE +KKV A+E+D RM L
Sbjct: 40 GQHVLKNPGVAQAIVDKADLKQSDTVLEVGPGSGNLTVKILEKAKKVIAVELDPRMAAEL 99
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
+R RL V+ D +KTE P FD+ ++N PY ISSPL KL+ T + R L+
Sbjct: 100 TKRVQGKPEQKRLEVLLGDVMKTEVPYFDVCISNTPYQISSPLTFKLLATTPAPRVCILM 159
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q+EFA RL A PGD ++RL+VN ++ A ++ +M V K +F P P V+SSVV I PK
Sbjct: 160 FQREFAMRLFAKPGDKLYSRLSVNAQMWAKIDHIMKVGKNNFKPPPAVESSVVRIVPKVP 219
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
PD++ +EW R F +KNKTL ++F V+ +L
Sbjct: 220 RPDISYEEWDGLLRIAFVRKNKTLRSSFLGTTSVVSML 257
>gi|327303040|ref|XP_003236212.1| dimethyladenosine transferase dimethyltransferase [Trichophyton
rubrum CBS 118892]
gi|326461554|gb|EGD87007.1| dimethyladenosine transferase dimethyltransferase [Trichophyton
rubrum CBS 118892]
Length = 377
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 100/218 (45%), Positives = 138/218 (63%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQH+L N V +IV K+ + DTVLE+GPG+GNLT+K+LE +KKV A+E+D RM L
Sbjct: 40 GQHVLKNPGVAQAIVDKADLKQSDTVLEVGPGSGNLTVKILEKAKKVIAVELDPRMAAEL 99
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
+R RL V+ D +KTE P FD+ ++N PY ISSPL KL+ + R L+
Sbjct: 100 TKRVQGKPEQKRLEVLLGDVMKTEVPYFDVCISNTPYQISSPLTFKLLATNPAPRVCILM 159
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q+EFA RL A PGD ++RL+VN ++ A ++ +M V K +F P P V+SSVV I PK
Sbjct: 160 FQREFAMRLFAKPGDKLYSRLSVNAQMWAKIDHIMKVGKNNFKPPPAVESSVVRIVPKVP 219
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
PD++ DEW R F +KNKTL ++F V+ +L
Sbjct: 220 RPDISYDEWDGLLRIAFVRKNKTLRSSFLGTTSVVSML 257
>gi|326479389|gb|EGE03399.1| dimethyladenosine transferase dimethyltransferase [Trichophyton
equinum CBS 127.97]
Length = 378
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 100/218 (45%), Positives = 138/218 (63%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQH+L N V +IV K+ + DTVLE+GPG+GNLT+K+LE +KKV A+E+D RM L
Sbjct: 40 GQHVLKNPGVAQAIVDKADLKQSDTVLEVGPGSGNLTVKILEKAKKVIAVELDPRMAAEL 99
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
+R RL V+ D +KTE P FD+ ++N PY ISSPL KL+ + R L+
Sbjct: 100 TKRVQGKPEQKRLEVLLGDVMKTEVPYFDVCISNTPYQISSPLTFKLLATNPAPRVCILM 159
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q+EFA RL A PGD ++RL+VN ++ A ++ +M V K +F P P V+SSVV I PK
Sbjct: 160 FQREFAMRLFAKPGDKLYSRLSVNAQMWAKIDHIMKVGKNNFKPPPAVESSVVRIVPKVP 219
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
PD++ DEW R F +KNKTL ++F V+ +L
Sbjct: 220 RPDISYDEWDGLLRIAFVRKNKTLRSSFLGTTSVVSML 257
>gi|326471294|gb|EGD95303.1| dimethyladenosine transferase dimethyltransferase [Trichophyton
tonsurans CBS 112818]
Length = 378
Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 100/218 (45%), Positives = 138/218 (63%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQH+L N V +IV K+ + DTVLE+GPG+GNLT+K+LE +KKV A+E+D RM L
Sbjct: 40 GQHVLKNPGVAQAIVDKADLKQSDTVLEVGPGSGNLTVKILEKAKKVIAVELDPRMAAEL 99
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
+R RL V+ D +KTE P FD+ ++N PY ISSPL KL+ + R L+
Sbjct: 100 TKRVQGKPEQKRLEVLLGDVMKTEVPYFDVCISNTPYQISSPLTFKLLATNPAPRVCILM 159
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q+EFA RL A PGD ++RL+VN ++ A ++ +M V K +F P P V+SSVV I PK
Sbjct: 160 FQREFAMRLFAKPGDKLYSRLSVNAQMWAKIDHIMKVGKNNFKPPPAVESSVVRIVPKVP 219
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
PD++ DEW R F +KNKTL ++F V+ +L
Sbjct: 220 RPDISYDEWDGLLRIAFVRKNKTLRSSFLGTTSVVSML 257
>gi|300120833|emb|CBK21075.2| unnamed protein product [Blastocystis hominis]
Length = 314
Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 101/219 (46%), Positives = 142/219 (64%), Gaps = 1/219 (0%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQH + N V+ +I+ KS I P D VLEIGPG G LT++LL+ +KKV AIE DERMV +
Sbjct: 26 GQHFIKNISVVHNIIEKSGIKPTDIVLEIGPGAGILTMELLKKAKKVIAIEKDERMVHEI 85
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
++ + + L ++ D LK E P FDL V+N+PY ISS +V KL+ FR+A L+
Sbjct: 86 QKKVQGTEYESHLEIVYGDFLKVELPYFDLCVSNVPYVISSGVVFKLLQHRPIFRAAILM 145
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q+EF +RL A PGD+ ++R++VN +L+A + ++ V + +F P PKV+S V I P
Sbjct: 146 FQEEFTQRLCAKPGDNMYSRISVNTQLLARTQQLLKVGRNNFNPPPKVESRVCRIEPLNP 205
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLR 227
P+VN +EW CF +KNKTL A FK K V+ELL+
Sbjct: 206 RPEVNFEEWDGLVNICFHRKNKTLAAIFKN-KSVLELLQ 243
>gi|358387929|gb|EHK25523.1| hypothetical protein TRIVIDRAFT_177538 [Trichoderma virens Gv29-8]
Length = 385
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 102/225 (45%), Positives = 145/225 (64%), Gaps = 2/225 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ + GQHIL N V D+IV K+ + P DTVLE+GPGTGNLT+++LE +KK +E+D R
Sbjct: 33 FNTNFGQHILKNPGVSDAIVEKAFLKPTDTVLEVGPGTGNLTVRILERAKKCICVELDPR 92
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M + +R +L V+ D +KTE P FD+ ++N PY ISSPLV KL+ R
Sbjct: 93 MAAEVTKRVQGKPEQRKLEVLLGDVIKTELPAFDVCISNTPYQISSPLVFKLLSLPNPPR 152
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ L+ Q+EFA RL A PGD+ + RL+VN + A + +M V K +F P P+V+SSVV I
Sbjct: 153 CSVLMFQREFALRLTARPGDALYCRLSVNAQFWAKITHIMKVGKNNFRPPPQVESSVVRI 212
Query: 184 RPKA--EIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
PK + P+V+ DEW R CF +KNKTL A++ K+V+ ++
Sbjct: 213 EPKMGKDRPNVSWDEWDGLLRVCFVRKNKTLRASWLGTKEVLAMV 257
>gi|303388914|ref|XP_003072690.1| dimethyladenosine transferase [Encephalitozoon intestinalis ATCC
50506]
gi|303301832|gb|ADM11330.1| dimethyladenosine transferase [Encephalitozoon intestinalis ATCC
50506]
Length = 277
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 99/215 (46%), Positives = 143/215 (66%), Gaps = 3/215 (1%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+K GQHIL N V+D+I+ ++ I P DTVLEIG GTGNLT+KLL+ +KKV EID R
Sbjct: 6 FNKQHGQHILKNMGVIDTIIERAKIKPTDTVLEIGGGTGNLTMKLLQKAKKVICYEIDPR 65
Query: 64 MV-EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSF 122
+ E+ + G + + DALK +FP FDL ++N+PY ISSP + KL+ F
Sbjct: 66 LAAELAKKVNGTPGMAQKFQLFVGDALKHDFPHFDLCISNLPYQISSPFMFKLL--KYDF 123
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
+ A ++ Q+EF+ RL+A PG SE+ RL+V +++A V+ V+ VSK F+P PK++SS V
Sbjct: 124 KCAFIMFQREFSDRLVAKPGSSEYCRLSVGAQMLAQVDHVLKVSKNSFVPPPKIESSFVR 183
Query: 183 IRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I P+ P ++L+E+ F + CF +KNKTL A F+
Sbjct: 184 IEPRIPRPPIDLEEFDRFLKICFLRKNKTLKANFR 218
>gi|19112914|ref|NP_596122.1| 18S rRNA dimethylase (predicted) [Schizosaccharomyces pombe 972h-]
gi|26556992|sp|Q9USU2.1|DIM1_SCHPO RecName: Full=Dimethyladenosine transferase; AltName: Full=18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=18S rRNA dimethylase;
AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|6048291|emb|CAB58154.1| 18S rRNA dimethylase (predicted) [Schizosaccharomyces pombe]
Length = 307
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 103/223 (46%), Positives = 144/223 (64%), Gaps = 1/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+K GQHIL N V IV K+ + DTVLE+GPGTGNLT+++LE ++KV A+E+D R
Sbjct: 24 FNKDFGQHILKNPLVAQGIVDKADLKQSDTVLEVGPGTGNLTVRMLEKARKVIAVEMDPR 83
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M + +R + +L V+ D +KT+ P FD+ V+N PY ISSPLV KL+ + R
Sbjct: 84 MAAEITKRVQGTPKEKKLQVVLGDVIKTDLPYFDVCVSNTPYQISSPLVFKLLQQRPAPR 143
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+A L+ Q+EFA RL+A PGD + RL+ NV++ A V+ +M V K +F P P V+SSVV I
Sbjct: 144 AAILMFQREFALRLVARPGDPLYCRLSANVQMWAHVKHIMKVGKNNFRPPPLVESSVVRI 203
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
PK P + +EW R F +KNKT+GA FK +IE++
Sbjct: 204 EPKNPPPPLAFEEWDGLLRIVFLRKNKTIGACFK-TSSIIEMV 245
>gi|429851949|gb|ELA27106.1| dimethyladenosine transferase dimethyltransferase [Colletotrichum
gloeosporioides Nara gc5]
Length = 379
Score = 199 bits (507), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 104/225 (46%), Positives = 148/225 (65%), Gaps = 2/225 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ + GQHIL N V D+IV K+ + P DTVLEIGPGTGNLT+++LE SKK+ AIE D R
Sbjct: 33 FNTNVGQHILKNPGVADAIVHKAELKPTDTVLEIGPGTGNLTVRILEKSKKLIAIEFDPR 92
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M + +R + +L V+ DA+K ++ FD++++N PY ISSPLV K++ K R
Sbjct: 93 MAAEVTKRVQGTPEQRKLEVMLGDAIKVDWVPFDVLISNTPYQISSPLVFKMLAMPKPPR 152
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A L+ Q EF +RL+A PGD + RL+VN A VM VSK +F P P+VDS VV I
Sbjct: 153 QAILMFQLEFGQRLVAKPGDKLYGRLSVNANFWATCSNVMKVSKANFRPPPQVDSCVVRI 212
Query: 184 RPK--AEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
PK AE P ++ +E+ R CF++KN+T+ A++ K+V+++L
Sbjct: 213 VPKQGAERPTISFEEFDGLLRICFNRKNRTMRASWLGTKEVLQML 257
>gi|367005092|ref|XP_003687278.1| hypothetical protein TPHA_0J00200 [Tetrapisispora phaffii CBS 4417]
gi|357525582|emb|CCE64844.1| hypothetical protein TPHA_0J00200 [Tetrapisispora phaffii CBS 4417]
Length = 319
Score = 199 bits (507), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 102/223 (45%), Positives = 144/223 (64%), Gaps = 1/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ GQHIL N V IV K+ I P D VLE+GPGTGNLT+++LE ++KV A+E+D R
Sbjct: 31 FNTDLGQHILKNPLVAQGIVDKAGIQPSDIVLEVGPGTGNLTVRILEQARKVVAVEMDPR 90
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R + +L+++ D +KT+ P FD+ ++N PY ISSPLV KL+ K R
Sbjct: 91 MAAELTKRVHGTPGEKKLDILLGDFMKTDLPYFDICISNTPYQISSPLVFKLINQPKPPR 150
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ L+ Q+EFA RLLA PGDS + RL+ NV++ A+V +M V + +F P P+V+SSVV I
Sbjct: 151 VSILMFQREFALRLLARPGDSLYCRLSANVQMWANVTHIMKVGRNNFRPPPQVESSVVRI 210
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
K P V+ +EW R F +KN+T+ A FK V+E+L
Sbjct: 211 EIKNPRPQVDFNEWDGLLRILFVRKNRTIAAGFKS-STVLEIL 252
>gi|70953687|ref|XP_745929.1| dimethyladenosine transferase [Plasmodium chabaudi chabaudi]
gi|56526401|emb|CAH78914.1| dimethyladenosine transferase, putative [Plasmodium chabaudi
chabaudi]
Length = 379
Score = 199 bits (507), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 106/213 (49%), Positives = 137/213 (64%), Gaps = 1/213 (0%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQH+L N +LD I+ + I D VLEIG GTGNLT+KLL ++KKV I+ID RM+
Sbjct: 75 KKHGQHLLKNPGILDKIIIAAKIKSSDVVLEIGCGTGNLTIKLLPLAKKVITIDIDARMI 134
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSA 125
+ +R G+ + L V DA+KT FP+FD+ ANIPY ISSPL+ KL+ F+ A
Sbjct: 135 SEVKKRCLYEGYSN-LEVYEGDAIKTIFPRFDVCTANIPYKISSPLIFKLIAHRPLFKCA 193
Query: 126 TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP 185
L+ QKEFA R+LA+ GDS ++RL VNVKL V V +V + F P PKVDS V+ + P
Sbjct: 194 VLMFQKEFAERMLANVGDSNYSRLTVNVKLFCRVIKVCNVDRSSFNPPPKVDSIVLKLIP 253
Query: 186 KAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
K +N DEW R CFS+K KTL A FK+
Sbjct: 254 KENNSMINFDEWDNLLRICFSRKRKTLHAIFKR 286
>gi|410076988|ref|XP_003956076.1| hypothetical protein KAFR_0B06450 [Kazachstania africana CBS 2517]
gi|372462659|emb|CCF56941.1| hypothetical protein KAFR_0B06450 [Kazachstania africana CBS 2517]
Length = 318
Score = 199 bits (506), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 101/223 (45%), Positives = 144/223 (64%), Gaps = 1/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ GQHIL N V IV K++I P D VLE+GPGTGNLT+++LE ++KV A+E+D R
Sbjct: 30 FNTDLGQHILKNPLVAQGIVDKANIKPSDVVLEVGPGTGNLTVRILEQARKVVAVEMDPR 89
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R + +L +I D +KTE P FD+ ++N PY ISSPLV KL+ + R
Sbjct: 90 MAAELTKRVHGTPAERKLEIILGDFMKTELPYFDVCISNTPYQISSPLVFKLINQPRPPR 149
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ L+ Q+EFA RLLA PGDS + RL+ NV++ A+V +M V + +F P P+V+SSVV I
Sbjct: 150 VSILMFQREFAMRLLAKPGDSLYCRLSANVQMWANVTHIMKVGRNNFRPPPQVESSVVRI 209
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
K+ P ++ +EW R F +KN+ + A FK V+E+L
Sbjct: 210 EIKSPRPQIDFNEWDGLLRIVFVRKNRMISAGFKS-NTVLEIL 251
>gi|389642445|ref|XP_003718855.1| dimethyladenosine transferase [Magnaporthe oryzae 70-15]
gi|351641408|gb|EHA49271.1| dimethyladenosine transferase [Magnaporthe oryzae 70-15]
gi|440466757|gb|ELQ36004.1| dimethyladenosine transferase [Magnaporthe oryzae Y34]
gi|440481770|gb|ELQ62318.1| dimethyladenosine transferase [Magnaporthe oryzae P131]
Length = 390
Score = 199 bits (506), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 101/224 (45%), Positives = 148/224 (66%), Gaps = 2/224 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K GQHIL N + + IV+K+ + P DTVLE+GPGTGNL++K+LE ++K+ A+E+D R
Sbjct: 42 FKKDYGQHILKNPGIAEEIVKKAYLRPTDTVLEVGPGTGNLSVKILERAQKLIAVELDPR 101
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R +L VI D +K + P FD++++N PY ISSPLV K++ R
Sbjct: 102 MGAELTKRVQGKPEQRKLEVILGDVIKADLPPFDVLISNTPYQISSPLVFKMLALPNPPR 161
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
L+ Q+EF+ RL A PG++ ++RL+VNV+L + V +M V K +F P P+V+SSVV I
Sbjct: 162 CMVLMFQREFSSRLTARPGEALYSRLSVNVQLFSKVTHIMKVGKANFKPPPQVESSVVRI 221
Query: 184 RPK--AEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIEL 225
PK E P+V+ +EW R CF++KNKTL A+F K+V+ +
Sbjct: 222 EPKLGRERPNVSWEEWDGMLRVCFNRKNKTLHASFLGVKEVLAM 265
>gi|403223934|dbj|BAM42064.1| dimethyladenosine transferase [Theileria orientalis strain
Shintoku]
Length = 376
Score = 199 bits (506), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 105/226 (46%), Positives = 149/226 (65%), Gaps = 3/226 (1%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F K GQH+L N VLD +V+ + I DTVLEIGPGTGN+T++L+ +++KV A++ID
Sbjct: 68 MVFVKKFGQHMLKNPGVLDKLVQAAEIRTTDTVLEIGPGTGNITVRLVPLARKVIAVDID 127
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RM+ + +R G+ + L VI DAL+T FP+FD+ VAN+PY ISSP + K++
Sbjct: 128 ARMIGEVKKRCLQMGYSN-LEVIEADALRTNFPKFDVCVANLPYQISSPFIFKILSHRPL 186
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSK-RDFLPCPKVDSSV 180
FRSA ++ Q+EFA RLLASP D ++ RLA+N +L V V V+ R F P PKV+S +
Sbjct: 187 FRSAIIIFQREFAERLLASPNDDKYGRLAINTRLFCTVTRVCKVAPGRSFNPPPKVESMI 246
Query: 181 VIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
V I P+ E V+ EW R CFS+K +TL + FK K+ V+ +L
Sbjct: 247 VKIVPREEPLVVDFGEWDGMIRVCFSRKRRTLRSLFK-KQSVLSIL 291
>gi|50293399|ref|XP_449111.1| hypothetical protein [Candida glabrata CBS 138]
gi|52782776|sp|Q6FKY3.1|DIM1_CANGA RecName: Full=Dimethyladenosine transferase; AltName: Full=18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=18S rRNA dimethylase;
AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|49528424|emb|CAG62081.1| unnamed protein product [Candida glabrata]
Length = 317
Score = 199 bits (506), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 101/223 (45%), Positives = 143/223 (64%), Gaps = 1/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ GQHIL N V IV K+ I P D VLE+GPGTGNLT+++LE ++KV A+E+D R
Sbjct: 30 FNTDLGQHILKNPLVAQGIVDKAQIKPSDIVLEVGPGTGNLTVRILEQARKVVAVEMDPR 89
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R + +L ++ D +KTE P FD+ ++N PY ISSPLV KL+ + R
Sbjct: 90 MAAELTKRVHGTPAEKKLEIMLGDFMKTELPYFDICISNTPYQISSPLVFKLINQPRPPR 149
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ L+ Q+EFA RLLA PGDS + RL+ NV++ A+V +M V + +F P P+V+SSVV I
Sbjct: 150 VSILMFQREFAMRLLARPGDSLYCRLSANVQMWANVTHIMKVGRNNFRPPPQVESSVVRI 209
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
K P ++ +EW R F +KN+T+ A FK V+E+L
Sbjct: 210 EIKNPRPQIDFNEWDGLLRIVFVRKNRTISAGFKS-TTVLEIL 251
>gi|387594557|gb|EIJ89581.1| dimethyladenosine transferase [Nematocida parisii ERTm3]
gi|387596597|gb|EIJ94218.1| dimethyladenosine transferase [Nematocida parisii ERTm1]
Length = 298
Score = 199 bits (506), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 104/215 (48%), Positives = 146/215 (67%), Gaps = 4/215 (1%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K+ GQHIL N ++ +++ K+ I P DTVLEIGPGTGNLTLKLL+ K+V AIE D +
Sbjct: 5 FKKTFGQHILKNPGIVTNMIDKAKIKPTDTVLEIGPGTGNLTLKLLDKCKRVVAIEKDRK 64
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
+ L +R ++L ++ +DA+ +P FDL V+N PY ISSPLV KL+ FR
Sbjct: 65 IASDLIKRIG--ARKNKLQLLIEDAIDANYPYFDLCVSNTPYQISSPLVFKLL--EYPFR 120
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ L+ QKEFA RL A+PG S + RL+V+V++ A V +M VSK++F P PKV+SS+V I
Sbjct: 121 ACVLMFQKEFADRLCAAPGTSSYCRLSVSVQIRAVVTHIMRVSKKNFRPPPKVESSIVKI 180
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
P+ D++L E+ R CFS+KNKT+G+ F+Q
Sbjct: 181 EPRRNKVDIDLTEFDGMLRICFSRKNKTIGSIFRQ 215
>gi|406608146|emb|CCH40580.1| Dimethyladenosine transferase [Wickerhamomyces ciferrii]
Length = 324
Score = 199 bits (506), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 101/223 (45%), Positives = 144/223 (64%), Gaps = 1/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ GQHIL N + IV K++I P D VLE+GPGTGNLT+++LE ++KV A+E+D R
Sbjct: 30 FNTDLGQHILKNPLIAQGIVDKANIKPSDIVLEVGPGTGNLTVRILERARKVFAVEMDPR 89
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R + +L ++ D +KTE P FD+ ++N PY ISSPLV KL+ + R
Sbjct: 90 MGAELTKRVHGTPVEKKLEIMLGDFMKTELPYFDICISNTPYQISSPLVFKLINQPRPPR 149
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ L+ Q+EFA RLLA PGDS + RL+ NV++ A+V +M V K +F P P+V+SSVV I
Sbjct: 150 VSILMFQREFALRLLARPGDSLYCRLSANVQMWANVTHIMKVGKNNFRPPPQVESSVVRI 209
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
K P V+ +EW R F +KN+T+ A FK ++E+L
Sbjct: 210 EIKNPRPQVDYNEWDGLLRIVFVRKNRTIAAGFKS-TTILEIL 251
>gi|126276136|ref|XP_001387199.1| Dimethyladenosine transferase (S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase) (18S rRNA
dimethylase) [Scheffersomyces stipitis CBS 6054]
gi|126213068|gb|EAZ63176.1| Dimethyladenosine transferase (S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase) (18S rRNA
dimethylase) [Scheffersomyces stipitis CBS 6054]
Length = 323
Score = 199 bits (506), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 102/223 (45%), Positives = 143/223 (64%), Gaps = 1/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ + GQHIL N V IV K+ I P D VLE+GPGTGNLT+++LE ++KV A+E+D R
Sbjct: 32 FNTNLGQHILKNPLVAQGIVDKAGIKPSDIVLEVGPGTGNLTVRILEQARKVVAVEMDPR 91
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R + +L ++ D +KT+ P FD+ ++N PY ISSPLV KL+ + R
Sbjct: 92 MAAELTKRVHGTPQQKKLEILLGDFMKTDLPYFDVCISNTPYQISSPLVFKLLNQPRPPR 151
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ L+ Q+EFA RLLA PGD + RL+ NV++ A+V +M V K +F P P+V+SSVV I
Sbjct: 152 VSILMFQREFALRLLARPGDGLYCRLSANVQMWANVTHIMKVGKNNFRPPPQVESSVVRI 211
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
K P+++ EW R F +KNKT+ A FK VIE+L
Sbjct: 212 EVKTPRPNIDFHEWDGLLRIVFVRKNKTIAAGFKS-NNVIEIL 253
>gi|393911741|gb|EJD76435.1| dimethyladenosine transferase [Loa loa]
Length = 306
Score = 199 bits (506), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 101/217 (46%), Positives = 138/217 (63%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ +GQHIL N V+++IV KS+I DTV E+G GTGNLT+ L+E +KKV A EID R
Sbjct: 23 FNTGRGQHILKNPGVVNAIVEKSAIKATDTVFEVGSGTGNLTVVLMEKAKKVIACEIDRR 82
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M+ L +R + +L + D +K E+P FD+ +AN+PY ISSP V +++ R
Sbjct: 83 MIAELKKRVIGTSHQQKLEMKQGDVIKMEWPFFDVCIANLPYQISSPFVFRMLLQRPLPR 142
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A L+ QKEFA RLLA PG + RL+VNV+ +A VE +M V + +F P PKVDS+VV I
Sbjct: 143 YAVLMFQKEFADRLLAKPGSKLYCRLSVNVQFLAQVEHLMKVKRTEFRPPPKVDSAVVRI 202
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKK 220
P+ P +N EW R F +KNKTL + FK +
Sbjct: 203 APRNPPPQINFQEWDNLLRIVFLRKNKTLLSLFKNNQ 239
>gi|45185713|ref|NP_983429.1| ACR026Wp [Ashbya gossypii ATCC 10895]
gi|52782780|sp|Q75C90.1|DIM1_ASHGO RecName: Full=Dimethyladenosine transferase; AltName: Full=18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=18S rRNA dimethylase;
AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|44981468|gb|AAS51253.1| ACR026Wp [Ashbya gossypii ATCC 10895]
Length = 319
Score = 199 bits (505), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 102/223 (45%), Positives = 142/223 (63%), Gaps = 1/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ GQHIL N V IV K+ I P D VLE+GPGTGNLT+++LE ++KV A+E D R
Sbjct: 30 FNTDLGQHILKNPLVAQGIVDKAQIKPSDIVLEVGPGTGNLTVRILEQARKVVAVEFDPR 89
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R + +L ++ D +KTE P FD+ ++N PY ISSPLV KL+ + R
Sbjct: 90 MAAELTKRVHGTPAEKKLEIMLGDFMKTELPYFDICISNTPYQISSPLVFKLINQPRPPR 149
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ L+ Q+EFA RLLA PGDS + RL+ NV++ A+V VM V + +F P P+V+SSVV I
Sbjct: 150 VSILMFQREFAMRLLARPGDSLYCRLSANVQMWANVTHVMKVGRNNFRPPPQVESSVVRI 209
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
K P V+ +EW R F +KN+T+ A FK V+E++
Sbjct: 210 EIKTPRPPVDFNEWDGLLRIVFVRKNRTISAGFKS-TAVLEIM 251
>gi|378756577|gb|EHY66601.1| dimethyladenosine transferase [Nematocida sp. 1 ERTm2]
Length = 296
Score = 199 bits (505), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 103/215 (47%), Positives = 146/215 (67%), Gaps = 4/215 (1%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K+ GQHIL N ++ +++ ++ I P DTVLEIGPGTGNLTLKLL+ K+V AIE D +
Sbjct: 5 FKKTFGQHILKNPGIVTTMIDRAKIKPTDTVLEIGPGTGNLTLKLLDKCKRVVAIEKDRK 64
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
+ L +R +L ++ DA++ E+P FDL V+N PY ISSPLV KL+ FR
Sbjct: 65 IASDLIKRVGSR--KTKLQLLIDDAIEVEYPYFDLCVSNTPYQISSPLVFKLL--NYPFR 120
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ L+ QKEFA RL A+ G S + RL+V+V++ A V VM VS+++F P PKV+SS+V I
Sbjct: 121 ACVLMFQKEFADRLCATAGTSNYCRLSVSVQIRATVTHVMKVSRKNFRPPPKVESSIVRI 180
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
P+ D++L+E+ R CFS+KNKT+G+ F+Q
Sbjct: 181 EPRRNKLDIDLNEFDGMLRICFSRKNKTIGSIFRQ 215
>gi|444314721|ref|XP_004178018.1| hypothetical protein TBLA_0A07080 [Tetrapisispora blattae CBS 6284]
gi|387511057|emb|CCH58499.1| hypothetical protein TBLA_0A07080 [Tetrapisispora blattae CBS 6284]
Length = 321
Score = 199 bits (505), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 101/223 (45%), Positives = 142/223 (63%), Gaps = 1/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ GQHIL N V IV K+ I P D VLE+GPGTGNLT+++LE ++KV A+E D R
Sbjct: 31 FNTDLGQHILKNPLVAQGIVDKAQIKPSDIVLEVGPGTGNLTVRILEQARKVIAVEFDPR 90
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R + +L++I D +KTE P FD+ ++N PY ISSPLV KL+ K R
Sbjct: 91 MAAELTKRVHGTPAEKKLDIILGDFMKTELPYFDICISNTPYQISSPLVFKLINQPKPPR 150
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ L+ Q+EFA RLLA PGD+ + RL+ NV++ A+V +M V + +F P P+V+SSVV I
Sbjct: 151 VSILMFQREFAMRLLARPGDTLYCRLSANVQMWANVTHIMKVGRNNFRPPPQVESSVVRI 210
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
K P ++ EW R F +KN+T+ A FK ++E+L
Sbjct: 211 EIKQPRPQIDFTEWDGLLRIVFVRKNRTISAGFKS-NAILEIL 252
>gi|328774301|gb|EGF84338.1| hypothetical protein BATDEDRAFT_22291 [Batrachochytrium
dendrobatidis JAM81]
Length = 306
Score = 199 bits (505), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 104/224 (46%), Positives = 141/224 (62%), Gaps = 1/224 (0%)
Query: 3 FFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDE 62
F KS GQHIL N V++ IV K+ I D VLE+GPGTGN+T+K+LE +KK +E+D
Sbjct: 20 LFDKSLGQHILKNPLVVNGIVDKACIKATDVVLEVGPGTGNVTVKILEKAKKTIVVEMDP 79
Query: 63 RMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSF 122
R+ L +R + +L VI D LK + P FD+ ++N PY ISS L KL+ +
Sbjct: 80 RLAAELTKRVRGTAEQRKLEVIVGDFLKVDLPYFDICISNTPYQISSSLTFKLLQHRPLW 139
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
R + L+ Q+EFA RL+A PGD+ + RL+ NV+L+A V+ VM V K +F P PKV+SSVV
Sbjct: 140 RCSILMFQREFALRLVAKPGDALYCRLSANVQLLAKVDHVMKVGKNNFRPPPKVESSVVR 199
Query: 183 IRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
I P P VN DEW R F +KN+T+ A FK V+E+L
Sbjct: 200 IEPHNPPPPVNFDEWDGLLRILFGRKNRTVAANFKT-STVLEML 242
>gi|363750244|ref|XP_003645339.1| hypothetical protein Ecym_3003 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888973|gb|AET38522.1| Hypothetical protein Ecym_3003 [Eremothecium cymbalariae
DBVPG#7215]
Length = 319
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/223 (46%), Positives = 140/223 (62%), Gaps = 1/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ GQHIL N V IV K+ I P D VLE+GPGTGNLT ++LE ++KV A+E D R
Sbjct: 30 FNTDLGQHILKNPLVAQGIVDKAQIKPSDIVLEVGPGTGNLTTRILEKARKVVAVEFDPR 89
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R + +L +I D KTE P FD+ ++N PY ISSPLV KL+ + R
Sbjct: 90 MAAELTKRVHGTAAEKKLEIILGDFTKTELPYFDVCISNTPYQISSPLVFKLINQPRPPR 149
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ L+ Q+EFA RLLA PGDS + RL+ NV++ A+V +M V K +F P P+V+SSVV I
Sbjct: 150 VSILMFQREFAMRLLARPGDSLYCRLSANVQMWANVMHIMKVGKNNFRPPPQVESSVVRI 209
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
K P V+ +EW R F +KN+T+ A FK V+E+L
Sbjct: 210 EIKNPRPQVDFNEWDGLLRIVFVRKNRTIAAGFKS-TTVLEIL 251
>gi|4572637|emb|CAA92585.1| dimethylase [Schizosaccharomyces pombe]
Length = 315
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 103/223 (46%), Positives = 142/223 (63%), Gaps = 1/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+K GQHIL N V IV K+ + DTVLE+GPGTGNLT+++LE ++KV A+E+D R
Sbjct: 24 FNKDFGQHILKNPLVAQGIVDKADLKQSDTVLEVGPGTGNLTVRMLEKARKVIAVEMDPR 83
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M + +R + +L V+ D +KT+ P FD+ V+N PY ISSPLV KL+ + R
Sbjct: 84 MAAEITKRVQGTPKEKKLQVVLGDVIKTDLPYFDVCVSNTPYQISSPLVFKLLQQRPAPR 143
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A L+ Q+EFA RL+A PGD + RL NV++ A V+ +M V K +F P P V+SSVV I
Sbjct: 144 GAILMFQREFALRLVARPGDPLYCRLPANVQMWAHVKHIMKVGKNNFRPPPLVESSVVRI 203
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
PK P + +EW R F +KNKT+GA FK +IE++
Sbjct: 204 EPKNPPPPLAFEEWDGLLRIVFLRKNKTIGACFK-TSSIIEMV 245
>gi|358390259|gb|EHK39665.1| hypothetical protein TRIATDRAFT_231783 [Trichoderma atroviride IMI
206040]
Length = 385
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/225 (45%), Positives = 145/225 (64%), Gaps = 2/225 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ + GQHIL N V D+IV K+ + P DTVLE+GPGTGNLT+++LE +KK +E+D R
Sbjct: 33 FNTNFGQHILKNPGVSDAIVDKAFLKPTDTVLEVGPGTGNLTVRILEKAKKCICVELDPR 92
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M + +R +L V+ D +KTE P FD+ ++N PY ISSPLV KL+ R
Sbjct: 93 MAAEVTKRVQGKPEQRKLEVLLGDVIKTELPAFDVCISNTPYQISSPLVFKLLSLPNPPR 152
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ L+ Q+EFA RL A PGD+ + RL+VN + A + +M V K +F P P+V+SSVV I
Sbjct: 153 CSVLMFQREFALRLTARPGDALYCRLSVNAQFWAKITHIMKVGKNNFRPPPQVESSVVRI 212
Query: 184 RPKA--EIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
PK + P+V+ DEW R CF +KNKTL A++ K+V+ ++
Sbjct: 213 EPKMGKDRPNVSWDEWDGLLRVCFVRKNKTLRASWLGTKEVLAMV 257
>gi|310793644|gb|EFQ29105.1| dimethyladenosine transferase [Glomerella graminicola M1.001]
Length = 378
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/225 (46%), Positives = 147/225 (65%), Gaps = 2/225 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ + GQHIL N V D+IV K+ + P DTVLEIGPGTGNLT+++LE SKK+ AIE D R
Sbjct: 32 FNTNVGQHILKNPGVADAIVHKAELKPTDTVLEIGPGTGNLTVRILEKSKKLIAIEFDPR 91
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M + +R + +L V+ DA+K ++ FD++++N PY ISSPLV K++ K R
Sbjct: 92 MAAEVTKRVQGTPEQRKLEVMLGDAIKVDWVPFDVLISNTPYQISSPLVFKMLAMPKPPR 151
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A L+ Q EF +RL+A PGD + RL+VN A VM VSK +F P P+VDS VV I
Sbjct: 152 QAILMFQLEFGQRLVAKPGDKLYGRLSVNANFWATCSNVMKVSKANFRPPPQVDSCVVRI 211
Query: 184 RPK--AEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
PK AE P + +E+ R CF++KN+T+ A++ K+V+++L
Sbjct: 212 VPKQGAERPTIAFEEFDGLLRICFNRKNRTMRASWLGTKEVLQML 256
>gi|66475300|ref|XP_627466.1| Dim1p-like ERMB/KSGA methylase [Cryptosporidium parvum Iowa II]
gi|32398681|emb|CAD98641.1| dimethyladenosine transferase, probable [Cryptosporidium parvum]
gi|46228931|gb|EAK89780.1| Dim1p-like ERMB/KSGA methylase [Cryptosporidium parvum Iowa II]
gi|323508725|dbj|BAJ77256.1| cgd6_930 [Cryptosporidium parvum]
gi|323509991|dbj|BAJ77888.1| cgd6_930 [Cryptosporidium parvum]
Length = 385
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/217 (47%), Positives = 137/217 (63%), Gaps = 1/217 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ K KGQH+L N +LD I+ + I P DTVLEIGPGTGNLT++LL +++KV A +ID
Sbjct: 56 VILDKKKGQHLLKNTGILDKIILAADIKPTDTVLEIGPGTGNLTMRLLPLARKVVAFDID 115
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV + +R+ +SGF++ L V DAL++ F FD+ AN+PY ISSP V KL+
Sbjct: 116 PRMVAEVKKRSVNSGFNN-LEVREGDALRSSFGDFDVCTANLPYQISSPFVFKLLSLQNK 174
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
+R A L+ Q+EFA RLLA PG+ + RL+VN KL + V V V+ F P PKV+S VV
Sbjct: 175 YRCAVLMFQEEFALRLLAEPGEKHYCRLSVNTKLFSKVTRVCKVAPGSFNPPPKVNSMVV 234
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
PK VN EW R CFS+K KT+ A F
Sbjct: 235 KFEPKKIPVSVNFREWDGLMRICFSRKKKTIRANFNN 271
>gi|384498902|gb|EIE89393.1| dimethyladenosine transferase [Rhizopus delemar RA 99-880]
Length = 308
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 103/215 (47%), Positives = 141/215 (65%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+K GQHIL N V IV K+++ DTVLEIGPGTGNLT+++L+ KKV+A+E+D R
Sbjct: 25 FNKDLGQHILKNPLVAQGIVDKANLVNSDTVLEIGPGTGNLTVRILQACKKVYAVEMDPR 84
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
+ L +R + +LN++ D +KT+ P FD+ ++N PY ISS LV KL+ FR
Sbjct: 85 LAAELQKRVNGTPDQKKLNILLGDFMKTDLPFFDVCISNTPYQISSVLVFKLLEHRPLFR 144
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A L+ Q+EFA RL+A PGD + RL+VNV+L+A V+ VM V K +F P PKV+SSVV +
Sbjct: 145 VAILMFQREFALRLVAKPGDELYCRLSVNVQLLAKVDHVMKVGKNNFRPPPKVESSVVRL 204
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
PK P VN E+ R F++K+K A FKQ
Sbjct: 205 EPKNPPPPVNFKEFDGLLRILFTRKHKIFSANFKQ 239
>gi|367017099|ref|XP_003683048.1| hypothetical protein TDEL_0G04700 [Torulaspora delbrueckii]
gi|359750711|emb|CCE93837.1| hypothetical protein TDEL_0G04700 [Torulaspora delbrueckii]
Length = 319
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/223 (44%), Positives = 143/223 (64%), Gaps = 1/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ GQHIL N + IV K+ I P DTVLE+GPGTGNLT+++LE +K V A+E+D R
Sbjct: 31 FNTDLGQHILKNPLIAQGIVDKAQIRPSDTVLEVGPGTGNLTVRILEQAKNVIAVEMDPR 90
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R + +L ++ D +KTE P FD+ ++N PY ISSPLV KL+ + R
Sbjct: 91 MAAELTKRVHGTPVERKLEILLGDFMKTELPYFDICISNTPYQISSPLVFKLINQPRPPR 150
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ L+ Q+EFA RL+A PGDS + RL+ NV++ A+V +M V K +F P P+V+SSVV +
Sbjct: 151 VSILMFQREFALRLIARPGDSLYCRLSANVQMWANVTHIMKVGKNNFRPPPQVESSVVRL 210
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
K P V+ +EW R F +KN+T+ A FK ++E+L
Sbjct: 211 EVKNPRPQVDYNEWDGLLRIVFVRKNRTISAGFKS-STILEIL 252
>gi|255712883|ref|XP_002552724.1| KLTH0C11704p [Lachancea thermotolerans]
gi|238934103|emb|CAR22286.1| KLTH0C11704p [Lachancea thermotolerans CBS 6340]
Length = 322
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/223 (45%), Positives = 143/223 (64%), Gaps = 1/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ GQHIL N V IV K+ I P D VLE+GPGTGNLT+++LE ++KV A+E+D R
Sbjct: 31 FNTDLGQHILKNPLVAQGIVDKAQIKPSDVVLEVGPGTGNLTVRILEQARKVIAVEMDPR 90
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R + +L+++ D +KT+ P FD+ ++N PY ISSPLV KL+ K R
Sbjct: 91 MGAELTKRVHGTAGEKKLDILLGDFMKTDLPYFDICISNTPYQISSPLVFKLINQPKPPR 150
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ L+ Q+EFA RLLA PGDS + RL+ NV++ A+V +M V K +F P P+V+SSVV +
Sbjct: 151 VSILMFQREFAMRLLARPGDSLYCRLSANVQMWANVTHIMKVGKNNFRPPPQVESSVVRL 210
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
K P V +EW R F +KN+T+ A FK V+E+L
Sbjct: 211 EIKNPRPKVEFNEWDGLLRIVFVRKNRTIAAGFKS-TTVLEIL 252
>gi|374106635|gb|AEY95544.1| FACR026Wp [Ashbya gossypii FDAG1]
Length = 319
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/223 (45%), Positives = 142/223 (63%), Gaps = 1/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ GQHIL N V IV K+ I P D VLE+GPGTGNLT+++LE ++KV A+E D R
Sbjct: 30 FNTDLGQHILKNPLVAQGIVDKAQIKPSDIVLEVGPGTGNLTVRILEQARKVVAVEFDPR 89
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R + +L ++ D +KTE P FD+ ++N PY ISSPLV KL+ + R
Sbjct: 90 MAAELTKRVHGTPAEKKLEIMLGDFMKTELPYFDICISNTPYQISSPLVFKLINQPRPPR 149
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ L+ Q+EFA RLLA PGDS + RL+ NV++ A+V VM V + +F P P+V+SSVV I
Sbjct: 150 VSILMFQREFAMRLLARPGDSLYCRLSANVQMWANVTHVMKVGRNNFRPPPQVESSVVRI 209
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
K P V+ +EW R F +KN+T+ A FK V+E++
Sbjct: 210 EIKNPRPPVDFNEWDGLLRIVFVRKNRTISAGFKS-TAVLEIM 251
>gi|440640762|gb|ELR10681.1| dimethyladenosine transferase [Geomyces destructans 20631-21]
Length = 390
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 97/219 (44%), Positives = 145/219 (66%), Gaps = 2/219 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ + GQHIL N V ++IV+K+ + P D VLE+GPGTGNLT+++LE ++KV A+E+D R
Sbjct: 31 FNTNVGQHILKNPGVAEAIVQKADLKPSDVVLEVGPGTGNLTVRILEKARKVIAVELDPR 90
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M + +R + RL+V+ D +KTE P FD+ ++N PY ISSPLV KL+ R
Sbjct: 91 MAAEVTKRVQGTPMQKRLDVLLGDVIKTELPPFDVCISNTPYQISSPLVFKLLSLPNPPR 150
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
++ L+ Q+EFA RL A PGD+ + RL+VN + A + +M V K +F P P+V+SSVV I
Sbjct: 151 TSILMFQREFALRLTARPGDALYCRLSVNAQFWARITHIMKVGKNNFKPPPQVESSVVRI 210
Query: 184 RPK--AEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKK 220
PK ++ P V+ +EW R CF +KN+ + A++ K+
Sbjct: 211 EPKTGSDRPGVSWEEWDGMLRVCFVRKNRLMRASWSGKE 249
>gi|134057541|emb|CAK48895.1| unnamed protein product [Aspergillus niger]
Length = 319
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/218 (45%), Positives = 140/218 (64%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQHIL N V IV K+ + D VLEIGPGTGNLT+K+LE +KKV A+E+D RM +
Sbjct: 39 GQHILKNPGVAQRIVDKAELKQSDVVLEIGPGTGNLTVKILEQAKKVIAVELDPRMAAEV 98
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
+R + RL+VI D +KT+ P FD+ ++N PY ISSPL KL+ + + R L+
Sbjct: 99 TKRVQGTPAQKRLDVILGDVIKTDLPYFDVCISNTPYQISSPLTFKLLATSPAPRICVLM 158
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q+EFA RL A PGD ++RL+VN ++ A ++ +M V K +F P P V+SSVV + PK
Sbjct: 159 FQREFALRLFAKPGDKLYSRLSVNAQMWAKIDHIMKVGKNNFKPPPLVESSVVRLVPKNP 218
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
P +N DEW R F +KNKT+ ++F K V+++L
Sbjct: 219 RPQINYDEWDGLLRILFVRKNKTIRSSFLGKSTVMDML 256
>gi|358367586|dbj|GAA84204.1| dimethyladenosine transferase dimethyltransferase [Aspergillus
kawachii IFO 4308]
Length = 387
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/218 (45%), Positives = 140/218 (64%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQHIL N V IV K+ + D VLEIGPGTGNLT+K+LE +KKV A+E+D RM +
Sbjct: 39 GQHILKNPGVAQRIVDKAELKQSDVVLEIGPGTGNLTVKILEQAKKVIAVELDPRMAAEV 98
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
+R + RL+VI D +KT+ P FD+ ++N PY ISSPL KL+ + + R L+
Sbjct: 99 TKRVQGTPAQKRLDVILGDVIKTDLPYFDVCISNTPYQISSPLTFKLLATSPAPRICVLM 158
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q+EFA RL A PGD ++RL+VN ++ A ++ +M V K +F P P V+SSVV + PK
Sbjct: 159 FQREFALRLFAKPGDKLYSRLSVNAQMWAKIDHIMKVGKNNFKPPPLVESSVVRLVPKNP 218
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
P +N DEW R F +KNKT+ ++F K V+++L
Sbjct: 219 RPQINYDEWDGLLRILFVRKNKTIRSSFLGKSTVMDML 256
>gi|317027289|ref|XP_001400595.2| dimethyladenosine transferase [Aspergillus niger CBS 513.88]
Length = 387
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/218 (45%), Positives = 140/218 (64%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQHIL N V IV K+ + D VLEIGPGTGNLT+K+LE +KKV A+E+D RM +
Sbjct: 39 GQHILKNPGVAQRIVDKAELKQSDVVLEIGPGTGNLTVKILEQAKKVIAVELDPRMAAEV 98
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
+R + RL+VI D +KT+ P FD+ ++N PY ISSPL KL+ + + R L+
Sbjct: 99 TKRVQGTPAQKRLDVILGDVIKTDLPYFDVCISNTPYQISSPLTFKLLATSPAPRICVLM 158
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q+EFA RL A PGD ++RL+VN ++ A ++ +M V K +F P P V+SSVV + PK
Sbjct: 159 FQREFALRLFAKPGDKLYSRLSVNAQMWAKIDHIMKVGKNNFKPPPLVESSVVRLVPKNP 218
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
P +N DEW R F +KNKT+ ++F K V+++L
Sbjct: 219 RPQINYDEWDGLLRILFVRKNKTIRSSFLGKSTVMDML 256
>gi|350635263|gb|EHA23625.1| hypothetical protein ASPNIDRAFT_47196 [Aspergillus niger ATCC 1015]
Length = 276
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/218 (45%), Positives = 140/218 (64%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQHIL N V IV K+ + D VLEIGPGTGNLT+K+LE +KKV A+E+D RM +
Sbjct: 6 GQHILKNPGVAQRIVDKAELKQSDVVLEIGPGTGNLTVKILEQAKKVIAVELDPRMAAEV 65
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
+R + RL+VI D +KT+ P FD+ ++N PY ISSPL KL+ + + R L+
Sbjct: 66 TKRVQGTPAQKRLDVILGDVIKTDLPYFDVCISNTPYQISSPLTFKLLATSPAPRICVLM 125
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q+EFA RL A PGD ++RL+VN ++ A ++ +M V K +F P P V+SSVV + PK
Sbjct: 126 FQREFALRLFAKPGDKLYSRLSVNAQMWAKIDHIMKVGKNNFKPPPLVESSVVRLVPKNP 185
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
P +N DEW R F +KNKT+ ++F K V+++L
Sbjct: 186 RPQINYDEWDGLLRILFVRKNKTIRSSFLGKSTVMDML 223
>gi|429329661|gb|AFZ81420.1| dimethyladenosine transferase, putative [Babesia equi]
Length = 467
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 142/216 (65%), Gaps = 1/216 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K GQH+L N +LD IV+ + I P DTVLEIGPGTGNLT++L+ +++KV AI+ID R
Sbjct: 152 FMKKFGQHMLKNPGILDKIVQAAEIRPSDTVLEIGPGTGNLTVRLVPLARKVIAIDIDSR 211
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
MV + +R G+++ L V+ DAL+ +FP+FD+ AN+PY ISSP V KL+ FR
Sbjct: 212 MVGEVKKRCIQLGYNN-LEVLEGDALRMKFPKFDVCTANLPYQISSPFVFKLLSHRPLFR 270
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A L+ Q+EFA RLLA+ + ++ RLA+N +L +V V V+ F P PKV+S +V I
Sbjct: 271 CAVLMFQREFAERLLANTNEEKYGRLAINTRLFCEVTRVCKVAAGSFNPPPKVESMIVKI 330
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQK 219
P+ + V+ EW R CFS+K +TL + FK +
Sbjct: 331 VPRDQPLVVDFGEWDGLIRVCFSRKRRTLRSLFKNQ 366
>gi|342181400|emb|CCC90879.1| conserved putative ribosomal RNA adenine dimethylase family protein
[Trypanosoma congolense IL3000]
Length = 344
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 102/221 (46%), Positives = 141/221 (63%), Gaps = 1/221 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+K GQHIL N V+ +IV K+++ D VLEIGPGTGNLT KLL+ +KKV A E+D
Sbjct: 60 MVFNKGFGQHILKNPLVIAAIVEKAAVKATDIVLEIGPGTGNLTEKLLQAAKKVIAFEVD 119
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV LN+R +S +L V+ + L EFP FD VAN+PY ISS LV KL+ +
Sbjct: 120 PRMVVELNKRFQNSPLAAKLQVVRGNCLDHEFPYFDKCVANVPYAISSALVFKLL-KKPN 178
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
F+ A L+ Q+EFA R+ A PG + RL+VN +L+A +M +S+ F P PKV+SSV+
Sbjct: 179 FKCAVLMFQREFALRVCAQPGSEAYCRLSVNSQLLARCSHLMKISRNSFNPPPKVESSVI 238
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKV 222
+ PK P V+ DEW + F++KNK + + F+ K V
Sbjct: 239 RLDPKHPPPSVDFDEWDGLVKLIFNRKNKKVSSIFRTKSTV 279
>gi|258574477|ref|XP_002541420.1| dimethyladenosine transferase [Uncinocarpus reesii 1704]
gi|237901686|gb|EEP76087.1| dimethyladenosine transferase [Uncinocarpus reesii 1704]
Length = 349
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 139/218 (63%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQH+L N V +IV K+ + D VLE+GPG+GNLT+K+LE +KKV A+E+D RM +
Sbjct: 39 GQHVLKNPGVAQAIVDKADLKQSDVVLEVGPGSGNLTVKILEKAKKVVAVELDPRMAAEV 98
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
+R + RL V+ D +KT+ P FD+ ++N PY ISSPL KL+ T + R L+
Sbjct: 99 TKRVQGTPEQKRLEVLLGDVIKTDLPYFDVCISNTPYQISSPLTFKLLATTPAPRVCILM 158
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q+EFA RL A PGD ++RL+VN ++ A ++ +M V K +F P P V+SSVV I PK
Sbjct: 159 FQREFAMRLFAKPGDKLYSRLSVNAQMWAKIDHIMKVGKNNFKPPPAVESSVVRIVPKVP 218
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
PD++ DEW R F +KNKTL ++F V+ +L
Sbjct: 219 RPDISYDEWDGLLRVAFVRKNKTLRSSFLGTSSVLNML 256
>gi|401623407|gb|EJS41507.1| dim1p [Saccharomyces arboricola H-6]
Length = 318
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/214 (46%), Positives = 137/214 (64%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ GQHIL N V IV K+ I P D VLE+GPGTGNLT+++LE +K V A+E+D R
Sbjct: 30 FNTDLGQHILKNPLVAQGIVDKAQIRPSDVVLEVGPGTGNLTVRILEQAKNVVAVEMDPR 89
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R + +L ++ D +KTE P FD+ ++N PY ISSPLV KL+ + R
Sbjct: 90 MAAELTKRVRGTPVEKKLEIMLGDFMKTELPYFDICISNTPYQISSPLVFKLINQPRPPR 149
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ L+ Q+EFA RLLA PGDS + RL+ NV++ A+V +M V K +F P P+V+SSVV +
Sbjct: 150 VSILMFQREFALRLLARPGDSLYCRLSANVQMWANVTHIMKVGKNNFRPPPQVESSVVRL 209
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
K P V+ +EW R F +KN+T+ A FK
Sbjct: 210 EIKNPRPQVDYNEWDGLLRIVFVRKNRTISAGFK 243
>gi|448525575|ref|XP_003869150.1| Dim1 18S rRNA dimethylase [Candida orthopsilosis Co 90-125]
gi|380353503|emb|CCG23013.1| Dim1 18S rRNA dimethylase [Candida orthopsilosis]
Length = 323
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 101/223 (45%), Positives = 144/223 (64%), Gaps = 1/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ + GQHIL N V IV K+ I P D VLE+GPGTGNLT+++LE ++KV A+E+D R
Sbjct: 32 FNTNLGQHILKNPLVAQGIVDKAQIKPSDIVLEVGPGTGNLTVRILEQARKVIAVEMDPR 91
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R + +L ++ D +KT+ P FD+ ++N PY ISSPLV KL+ + R
Sbjct: 92 MGAELTKRVHGTPQEKKLEILLGDFIKTDLPYFDICISNTPYQISSPLVFKLLNQPRPPR 151
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ L+ Q+EFA RL+A PGD + RL+ NV++ A+V +M V K +F P P+V+SSVV I
Sbjct: 152 VSILMFQREFAMRLVARPGDELYCRLSANVQMWANVTHIMKVGKNNFRPPPQVESSVVRI 211
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
K P+++ +EW R F +KNKT+ A FK VIE+L
Sbjct: 212 EVKTPRPNIDFNEWDGLLRIVFVRKNKTIAAGFKS-SNVIEIL 253
>gi|68467333|ref|XP_722328.1| likely dimethyladenosine transferase [Candida albicans SC5314]
gi|68467562|ref|XP_722214.1| likely dimethyladenosine transferase [Candida albicans SC5314]
gi|46444170|gb|EAL03447.1| likely dimethyladenosine transferase [Candida albicans SC5314]
gi|46444295|gb|EAL03571.1| likely dimethyladenosine transferase [Candida albicans SC5314]
gi|238878254|gb|EEQ41892.1| dimethyladenosine transferase [Candida albicans WO-1]
Length = 326
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/223 (44%), Positives = 145/223 (65%), Gaps = 1/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ + GQHIL N V IV K+ I P D VLE+GPGTGNLT+++LE ++KV A+E+D R
Sbjct: 32 FNTNLGQHILKNPLVAQGIVDKAQIKPSDIVLEVGPGTGNLTVRILEKARKVIAVEMDPR 91
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R + +L ++ D +KT+ P FD+ ++N PY ISSPLV KL+ + R
Sbjct: 92 MAAELTKRVHGTPQEKKLEILLGDFMKTDLPYFDICISNTPYQISSPLVFKLLNQPRPPR 151
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ L+ Q+EFA+RL+A PG+ + RL+ NV++ A+V +M V K +F P P+V+SSVV I
Sbjct: 152 VSILMFQREFAQRLVARPGEELYCRLSANVQMWANVTHIMKVGKNNFRPPPQVESSVVRI 211
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
K P+++ +EW R F +KNKT+ A FK VIE+L
Sbjct: 212 EIKNPRPNIDFNEWDGLLRIVFVRKNKTIAAGFKS-SNVIEIL 253
>gi|396498944|ref|XP_003845352.1| similar to dimethyladenosine transferase dimethyltransferase
[Leptosphaeria maculans JN3]
gi|312221933|emb|CBY01873.1| similar to dimethyladenosine transferase dimethyltransferase
[Leptosphaeria maculans JN3]
Length = 379
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 139/221 (62%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQHIL N V +IV+K+ + D VLE+GPGTGNLT+ +L+ +K V A+E+D RM
Sbjct: 36 KDLGQHILKNPGVASAIVQKAYLKQSDHVLEVGPGTGNLTVLILKAAKAVTAVEMDPRMA 95
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSA 125
L +R + RL V+ D +KTE P FD+ ++N PY ISSPLV KL+ RS
Sbjct: 96 AELTKRVQGTAEAKRLKVMLGDVIKTELPHFDVCISNTPYQISSPLVFKLLSLPSPPRSC 155
Query: 126 TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP 185
L+ Q+EFA RL A PG+ ++RL+VNV++ A V +M V + +F P P+V+S+VV I P
Sbjct: 156 ILMFQREFAMRLFAKPGEKLYSRLSVNVQMWAKVSHIMKVGRNNFNPPPQVESNVVRIEP 215
Query: 186 KAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
K P + DEW R F +KN+TL A+F V+ELL
Sbjct: 216 KHPRPQIAYDEWDGLLRIAFVRKNRTLRASFLGTAAVVELL 256
>gi|6324989|ref|NP_015057.1| Dim1p [Saccharomyces cerevisiae S288c]
gi|1169344|sp|P41819.1|DIM1_YEAST RecName: Full=Dimethyladenosine transferase; AltName: Full=18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=18S rRNA dimethylase;
AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|601876|gb|AAA57357.1| dimethyladenosine transferase [Saccharomyces cerevisiae]
gi|1370549|emb|CAA98001.1| DIM1 [Saccharomyces cerevisiae]
gi|151942536|gb|EDN60882.1| dimethyladenosine transferase [Saccharomyces cerevisiae YJM789]
gi|190407700|gb|EDV10965.1| dimethyladenosine transferase [Saccharomyces cerevisiae RM11-1a]
gi|256271159|gb|EEU06250.1| Dim1p [Saccharomyces cerevisiae JAY291]
gi|259149891|emb|CAY86694.1| Dim1p [Saccharomyces cerevisiae EC1118]
gi|285815278|tpg|DAA11170.1| TPA: Dim1p [Saccharomyces cerevisiae S288c]
gi|323302623|gb|EGA56429.1| Dim1p [Saccharomyces cerevisiae FostersB]
gi|323306894|gb|EGA60178.1| Dim1p [Saccharomyces cerevisiae FostersO]
gi|323331103|gb|EGA72521.1| Dim1p [Saccharomyces cerevisiae AWRI796]
gi|323335244|gb|EGA76533.1| Dim1p [Saccharomyces cerevisiae Vin13]
gi|323346064|gb|EGA80354.1| Dim1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323351899|gb|EGA84438.1| Dim1p [Saccharomyces cerevisiae VL3]
gi|349581556|dbj|GAA26713.1| K7_Dim1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365762663|gb|EHN04196.1| Dim1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392296254|gb|EIW07357.1| Dim1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 318
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/214 (46%), Positives = 137/214 (64%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ GQHIL N V IV K+ I P D VLE+GPGTGNLT+++LE +K V A+E+D R
Sbjct: 30 FNTDLGQHILKNPLVAQGIVDKAQIRPSDVVLEVGPGTGNLTVRILEQAKNVVAVEMDPR 89
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R + +L ++ D +KTE P FD+ ++N PY ISSPLV KL+ + R
Sbjct: 90 MAAELTKRVRGTPVEKKLEIMLGDFMKTELPYFDICISNTPYQISSPLVFKLINQPRPPR 149
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ L+ Q+EFA RLLA PGDS + RL+ NV++ A+V +M V K +F P P+V+SSVV +
Sbjct: 150 VSILMFQREFALRLLARPGDSLYCRLSANVQMWANVTHIMKVGKNNFRPPPQVESSVVRL 209
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
K P V+ +EW R F +KN+T+ A FK
Sbjct: 210 EIKNPRPQVDYNEWDGLLRIVFVRKNRTISAGFK 243
>gi|254583294|ref|XP_002497215.1| ZYRO0F00308p [Zygosaccharomyces rouxii]
gi|238940108|emb|CAR28282.1| ZYRO0F00308p [Zygosaccharomyces rouxii]
Length = 319
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 100/223 (44%), Positives = 143/223 (64%), Gaps = 1/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ GQHIL N V IV K+ + P DTVLE+GPGTGNLT+++LE +K +A+E+D R
Sbjct: 31 FNTDLGQHILKNPLVAQGIVDKAQLRPSDTVLEVGPGTGNLTVRILEQVRKAYAVEMDPR 90
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R + +L ++ D +KT+ P FD+ ++N PY ISSPLV KL+ + R
Sbjct: 91 MAAELTKRVRGTDGERKLEILLGDFIKTDLPYFDVCISNTPYQISSPLVFKLINQPRPPR 150
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A L+ Q+EFA RL+A PGD+ + RL+ NV++ A+V +M VSK +F P P+V+SSVV +
Sbjct: 151 VAVLMFQREFAMRLVARPGDALYCRLSANVQMWANVVHIMKVSKNNFRPPPQVESSVVRL 210
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
K P + +EW R F +KNKT+ A FK VI++L
Sbjct: 211 EIKNPRPPIEFNEWDGLLRIVFVRKNKTIAAGFKS-SSVIDIL 252
>gi|366992804|ref|XP_003676167.1| hypothetical protein NCAS_0D02250 [Naumovozyma castellii CBS 4309]
gi|342302033|emb|CCC69806.1| hypothetical protein NCAS_0D02250 [Naumovozyma castellii CBS 4309]
Length = 319
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 100/223 (44%), Positives = 142/223 (63%), Gaps = 1/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ GQHIL N V IV K+ I P D VLE+GPGTGNLT+++LE ++KV A+E+D R
Sbjct: 31 FNTDLGQHILKNPLVAQGIVDKAQIKPSDIVLEVGPGTGNLTVRILEQARKVVAVEMDPR 90
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R + +L ++ D +KT+ P FD+ ++N PY ISSPLV KL+ + R
Sbjct: 91 MAAELTKRVHGTPSEKKLEILLGDFMKTDLPYFDICISNTPYQISSPLVFKLINQPRPPR 150
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ L+ Q+EFA RLLA PGDS + RL+ NV++ A+V +M V + +F P P+V+SSVV I
Sbjct: 151 VSILMFQREFAMRLLARPGDSLYCRLSANVQMWANVTHIMKVGRNNFRPPPQVESSVVRI 210
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
K P V+ +EW R F +KN+ + A FK V+E+L
Sbjct: 211 EIKTPRPQVDFNEWDGLLRIVFVRKNRMISAGFKS-STVLEIL 252
>gi|253745520|gb|EET01398.1| Dimethyladenosine transferase [Giardia intestinalis ATCC 50581]
Length = 319
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 110/218 (50%), Positives = 138/218 (63%), Gaps = 4/218 (1%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQH+L N V+ SIV K+ I DTVLEIGPGTGNLTL LLE +K V AIEID RMV
Sbjct: 8 KQHGQHLLANPLVIKSIVEKAEIRSTDTVLEIGPGTGNLTLALLEKAKHVIAIEIDPRMV 67
Query: 66 EILNRR-AADSGFHDRLNVISKDALK---TEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
L +R AA + + +I KD K TE P FDL V+N PY ISS +V +L+
Sbjct: 68 SELKKRIAAIPEYRGKFTIIHKDFTKMPATEIPTFDLCVSNCPYNISSGIVFRLLEIQPL 127
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
R L+ Q EFA+RL A PG +++RL VN KL++ + ++ VS+ F P P VDS+VV
Sbjct: 128 PRKFVLMFQLEFAQRLAAEPGQDQYSRLTVNTKLLSKTKIIIRVSRNSFKPPPNVDSAVV 187
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQK 219
+ P P ++LDE+ TR FSKKNKTLGA FK K
Sbjct: 188 EMYPIGPPPGLDLDEFNGLTRILFSKKNKTLGAIFKTK 225
>gi|19074123|ref|NP_584729.1| DIMETHYLADENOSINE TRANSFERASE [Encephalitozoon cuniculi GB-M1]
gi|19068765|emb|CAD25233.1| DIMETHYLADENOSINE TRANSFERASE [Encephalitozoon cuniculi GB-M1]
gi|449328998|gb|AGE95273.1| dimethyladenosine transferase [Encephalitozoon cuniculi]
Length = 277
Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 140/216 (64%), Gaps = 3/216 (1%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+K GQHIL N V+D+I+ ++ I P DTVLE+G GTGNLT+KLL+ +KKV EID R
Sbjct: 6 FNKQHGQHILKNLGVIDTIIERARIKPTDTVLEVGGGTGNLTMKLLQKAKKVVCYEIDPR 65
Query: 64 MV-EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSF 122
+ E+ + G + + DALK +FP FDL + N+PY ISSP V KL+ F
Sbjct: 66 LAAELAKKVNGTPGMAQKFQLFVGDALKHDFPHFDLCITNLPYQISSPFVFKLL--KYDF 123
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
+ A ++ QKEF+ RL+A PG E+ RL+V +++A ++ V+ VSK F+P PKV+SS V
Sbjct: 124 KCAFIMFQKEFSDRLVARPGSPEYCRLSVGAQILAQIDHVLKVSKNSFVPPPKVESSFVR 183
Query: 183 IRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
I P+ P ++L E+ F + CF +KNKTL A FK
Sbjct: 184 IEPRIPRPPIDLGEFDRFLKICFLRKNKTLRANFKN 219
>gi|401825954|ref|XP_003887071.1| dimethyladenosine transferase [Encephalitozoon hellem ATCC 50504]
gi|392998229|gb|AFM98090.1| dimethyladenosine transferase [Encephalitozoon hellem ATCC 50504]
Length = 277
Score = 196 bits (498), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 99/215 (46%), Positives = 139/215 (64%), Gaps = 3/215 (1%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+K GQHIL N V+D+I+ ++ I P D VLEIG GTGNLT+KLL+ +KKV EID R
Sbjct: 6 FNKQHGQHILKNLGVVDTIIERARIKPTDVVLEIGGGTGNLTMKLLQKAKKVICYEIDPR 65
Query: 64 MV-EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSF 122
+ E+ R G + + DALK +FP FDL + N+PY ISSP V KL+ F
Sbjct: 66 LAAELAKRVNGVPGMAQKFQLFVGDALKHDFPHFDLCITNLPYQISSPFVFKLL--KYDF 123
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
+ A ++ Q+EF+ RL+A PG E+ RL+V +++A ++ V+ VSK F+P PKV+SS V
Sbjct: 124 KCAYVMFQREFSNRLVARPGSPEYCRLSVGAQMLAQIDHVLKVSKNSFVPPPKVESSFVR 183
Query: 183 IRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I P+ P ++ +E+ F + CF +KNKTL A FK
Sbjct: 184 IEPRVPRPPIDFEEFDRFLKICFLRKNKTLKANFK 218
>gi|122937785|gb|ABM68619.1| AAEL010575-PA [Aedes aegypti]
Length = 266
Score = 196 bits (498), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 99/197 (50%), Positives = 128/197 (64%)
Query: 22 IVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRL 81
++ K+ + P D VLEIGPGTGN+T+KLLE KKV A EID R+V L +R + +L
Sbjct: 1 MLDKAGLRPTDVVLEIGPGTGNMTVKLLEKVKKVVACEIDPRLVAELQKRVQGTPMQSKL 60
Query: 82 NVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASP 141
++ D LK + P FD VAN+PY ISSP V KL+ FR A L+ Q EFA+RL+A P
Sbjct: 61 QILIGDVLKADLPFFDCCVANMPYQISSPFVFKLLLHRPFFRCAVLMFQLEFAQRLVAKP 120
Query: 142 GDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAEIPDVNLDEWRAFT 201
GD + RL+VN +L+A V+ +M V K +F P PKV+SSVV I P+ P +N EW T
Sbjct: 121 GDKLYCRLSVNTQLLARVDMLMKVGKNNFRPPPKVESSVVRIEPRNPSPPINYTEWDGLT 180
Query: 202 RTCFSKKNKTLGATFKQ 218
R F +KNKTL A FKQ
Sbjct: 181 RIAFLRKNKTLAAAFKQ 197
>gi|365758154|gb|EHN00012.1| Dim1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 318
Score = 196 bits (497), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 137/214 (64%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ GQHIL N V IV K+ I P D VLE+GPGTGNLT+++LE +K V A+E+D R
Sbjct: 30 FNTDLGQHILKNPLVAQGIVDKAQIRPSDVVLEVGPGTGNLTVRILEQAKNVVAVEMDPR 89
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R + +L ++ D +KTE P FD+ ++N PY ISSPLV KL+ + R
Sbjct: 90 MAAELTKRVRGTPVEKKLEIMLGDFMKTELPYFDVCISNTPYQISSPLVFKLINQPRPPR 149
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ L+ Q+EFA RLLA PGDS + RL+ NV++ A+V +M V + +F P P+V+SSVV +
Sbjct: 150 VSILMFQREFALRLLARPGDSLYCRLSANVQMWANVTHIMKVGRNNFRPPPQVESSVVRL 209
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
K P V+ +EW R F +KN+T+ A FK
Sbjct: 210 EIKNPRPQVDYNEWDGLLRIVFVRKNRTISAGFK 243
>gi|365990505|ref|XP_003672082.1| hypothetical protein NDAI_0I02710 [Naumovozyma dairenensis CBS 421]
gi|343770856|emb|CCD26839.1| hypothetical protein NDAI_0I02710 [Naumovozyma dairenensis CBS 421]
Length = 319
Score = 196 bits (497), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 100/223 (44%), Positives = 141/223 (63%), Gaps = 1/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ GQHIL N V IV K+ I P D VLE+GPGTGNLT+++LE ++ V A+E+D R
Sbjct: 31 FNTDLGQHILKNPLVAQGIVDKAQIKPSDIVLEVGPGTGNLTVRILEQARNVIAVEMDPR 90
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R + +L ++ D +KTE P FD+ ++N PY ISSPLV KL+ + R
Sbjct: 91 MAAELTKRVHGTPGEKKLEIMLGDFMKTELPYFDICISNTPYQISSPLVFKLINQPRPPR 150
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ L+ Q+EFA RLLA PGDS + RL+ NV++ A+V +M V + +F P P+V+SSVV I
Sbjct: 151 VSILMFQREFAMRLLARPGDSLYCRLSANVQMWANVTHIMKVGRNNFRPPPQVESSVVRI 210
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
K P V+ +EW R F +KN+ + A FK V+E+L
Sbjct: 211 EIKNPRPQVDFNEWDGLLRIVFVRKNRMISAGFKS-STVLEIL 252
>gi|164655863|ref|XP_001729060.1| hypothetical protein MGL_3848 [Malassezia globosa CBS 7966]
gi|159102949|gb|EDP41846.1| hypothetical protein MGL_3848 [Malassezia globosa CBS 7966]
Length = 330
Score = 196 bits (497), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 101/225 (44%), Positives = 141/225 (62%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
IF GQHIL N V IV K+++ P DTVLE+GPGTGNLT+++LE +K+V +E+D
Sbjct: 46 IFNTDRFGQHILKNPLVAQGIVDKANLKPTDTVLEVGPGTGNLTVRILEKAKRVVVVEMD 105
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RM L +R +L ++ D KT+ P FD+V++N PY ISSPLV KL+
Sbjct: 106 PRMAAELTKRVQGKPEQRKLEIVIGDVCKTDLPYFDVVISNTPYQISSPLVFKLLSHRPL 165
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PG + RL+ NV+L A V+ +M V++ F P P+VDSSVV
Sbjct: 166 FRCAILMFQREFAMRLVARPGSPLWGRLSANVQLYAKVDHIMKVARGSFRPPPQVDSSVV 225
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
I P P + +E+ TR FS++NK L A F + V+E++
Sbjct: 226 RIVPLNPPPPIKFEEFDGLTRIVFSRRNKVLRACFFGARGVLEMM 270
>gi|241950377|ref|XP_002417911.1| 18S rRNA dimethylase, putative; S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase, putative;
dimethyladenosine transferase, putative [Candida
dubliniensis CD36]
gi|223641249|emb|CAX45629.1| 18S rRNA dimethylase, putative [Candida dubliniensis CD36]
Length = 330
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 99/223 (44%), Positives = 145/223 (65%), Gaps = 1/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ + GQHIL N V IV K+ I P D VLE+GPGTGNLT+++LE ++KV A+E+D R
Sbjct: 32 FNTNLGQHILKNPLVAQGIVDKAQIKPSDIVLEVGPGTGNLTVRILEKARKVIAVEMDPR 91
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R + +L ++ D +KT+ P FD+ ++N PY ISSPLV KL+ + R
Sbjct: 92 MAAELTKRVHGTPQEKKLEILLGDFMKTDLPYFDICISNTPYQISSPLVFKLLNQPRPPR 151
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ L+ Q+EFA+RL+A PG+ + RL+ NV++ A+V +M V K +F P P+V+SSVV I
Sbjct: 152 VSILMFQREFAQRLVARPGEELYCRLSANVQMWANVTHIMKVGKNNFRPPPQVESSVVRI 211
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
K P+++ +EW R F +KNKT+ A FK VI++L
Sbjct: 212 EVKNPRPNIDFNEWDGLLRIVFVRKNKTIAAGFKS-SNVIDIL 253
>gi|392863543|gb|EAS35700.2| dimethyladenosine transferase [Coccidioides immitis RS]
Length = 379
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 138/218 (63%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQH+L N V +IV K+ + D VLE+GPG+GNLT+K+LE +KKV A+E+D RM +
Sbjct: 39 GQHVLKNPGVAQAIVDKADLKQSDVVLEVGPGSGNLTVKILEKAKKVIAVELDPRMAAEV 98
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
+R RL V+ D +KT+ P FD+ ++N PY ISSPL KL+ T + R L+
Sbjct: 99 TKRVQGKPEQKRLEVLLGDVIKTDLPYFDVCISNTPYQISSPLTFKLLATTPAPRVCILM 158
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q+EFA RL A PGD ++RL+VN ++ A ++ +M V K +F P P V+SSVV I PK
Sbjct: 159 FQREFAMRLFAKPGDKLYSRLSVNAQMWAKIDHIMKVGKNNFKPPPAVESSVVRIVPKTP 218
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
PD++ DEW R F +KNKTL ++F V+ +L
Sbjct: 219 RPDISYDEWDGLLRIAFVRKNKTLRSSFLGTSSVLSML 256
>gi|303312255|ref|XP_003066139.1| dimethyladenosine transferase, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240105801|gb|EER23994.1| dimethyladenosine transferase, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320040136|gb|EFW22070.1| dimethyladenosine transferase [Coccidioides posadasii str.
Silveira]
Length = 379
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 138/218 (63%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQH+L N V +IV K+ + D VLE+GPG+GNLT+K+LE +KKV A+E+D RM +
Sbjct: 39 GQHVLKNPGVAQAIVDKADLKQSDVVLEVGPGSGNLTVKILEKAKKVIAVELDPRMAAEV 98
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
+R RL V+ D +KT+ P FD+ ++N PY ISSPL KL+ T + R L+
Sbjct: 99 TKRVQGKPEQKRLEVLLGDVIKTDLPYFDVCISNTPYQISSPLTFKLLATTPAPRVCILM 158
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q+EFA RL A PGD ++RL+VN ++ A ++ +M V K +F P P V+SSVV I PK
Sbjct: 159 FQREFAMRLFAKPGDKLYSRLSVNAQMWAKIDHIMKVGKNNFKPPPAVESSVVRIVPKTP 218
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
PD++ DEW R F +KNKTL ++F V+ +L
Sbjct: 219 RPDISYDEWDGLLRIAFVRKNKTLRSSFLGTSSVLSML 256
>gi|119193222|ref|XP_001247217.1| hypothetical protein CIMG_00988 [Coccidioides immitis RS]
Length = 346
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 138/218 (63%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQH+L N V +IV K+ + D VLE+GPG+GNLT+K+LE +KKV A+E+D RM +
Sbjct: 6 GQHVLKNPGVAQAIVDKADLKQSDVVLEVGPGSGNLTVKILEKAKKVIAVELDPRMAAEV 65
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
+R RL V+ D +KT+ P FD+ ++N PY ISSPL KL+ T + R L+
Sbjct: 66 TKRVQGKPEQKRLEVLLGDVIKTDLPYFDVCISNTPYQISSPLTFKLLATTPAPRVCILM 125
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q+EFA RL A PGD ++RL+VN ++ A ++ +M V K +F P P V+SSVV I PK
Sbjct: 126 FQREFAMRLFAKPGDKLYSRLSVNAQMWAKIDHIMKVGKNNFKPPPAVESSVVRIVPKTP 185
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
PD++ DEW R F +KNKTL ++F V+ +L
Sbjct: 186 RPDISYDEWDGLLRIAFVRKNKTLRSSFLGTSSVLSML 223
>gi|149239484|ref|XP_001525618.1| dimethyladenosine transferase [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451111|gb|EDK45367.1| dimethyladenosine transferase [Lodderomyces elongisporus NRRL
YB-4239]
Length = 329
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 99/214 (46%), Positives = 137/214 (64%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ + GQHIL N V IV K+ I P D VLE+GPGTGNLT+++LE ++KV A E+D R
Sbjct: 32 FNTNLGQHILKNPLVAQGIVDKAQIRPSDVVLEVGPGTGNLTVRILEQARKVIASEMDPR 91
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R + +L ++ D +KTE P FD+ ++N PY ISSPLV KL+ R
Sbjct: 92 MAAELTKRVHGTPQEKKLEILLGDFMKTELPYFDICISNTPYQISSPLVFKLLNQPNPPR 151
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ L+ Q+EFA RL+A PGD + RL+ NV++ A+V +M V K +F P PKV+SSVV I
Sbjct: 152 VSILMFQREFAMRLVARPGDELYCRLSANVQMWANVTHIMKVGKNNFRPPPKVESSVVRI 211
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
K P+++ +EW R F +KNKT+ A FK
Sbjct: 212 EIKNPRPNIDFNEWDGLLRIVFVRKNKTIAAGFK 245
>gi|388858431|emb|CCF48025.1| probable rRNA (adenine-N6,N6-)-dimethyltransferase [Ustilago
hordei]
Length = 334
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 101/225 (44%), Positives = 144/225 (64%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
IF GQHIL N V IV K+++ P D VLE+GPGTGNLT+++LE +KK +E+D
Sbjct: 49 IFNTDKFGQHILKNPLVAQGIVDKANLKPTDMVLEVGPGTGNLTVRILEKAKKTTVVEMD 108
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RM L++R +L+++ D KTE P FD+ ++N PY ISSPLV KL+
Sbjct: 109 PRMAAELSKRVQGKPEQRKLDIMLGDFCKTELPYFDVCISNTPYQISSPLVFKLLSHRPL 168
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD+ + RL+ NV+L + V+ +M VS+ F P P+V+SSVV
Sbjct: 169 FRCAILMFQREFALRLIARPGDNLWCRLSANVQLYSKVDHIMKVSRNSFRPPPQVESSVV 228
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
I P P + +E+ TR FS++NKT+ A+F + VI++L
Sbjct: 229 RITPLNPPPAIPFEEFDGLTRIVFSRRNKTVRASFFDARGVIDML 273
>gi|354545789|emb|CCE42517.1| hypothetical protein CPAR2_201600 [Candida parapsilosis]
Length = 326
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/223 (43%), Positives = 145/223 (65%), Gaps = 1/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ + GQHIL N ++ IV K+ I P D VLE+GPGTGNLT+++LE ++KV A+E+D R
Sbjct: 32 FNTNLGQHILKNPQIAQGIVDKAQIKPSDIVLEVGPGTGNLTVRILEQARKVIAVEMDPR 91
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R + +L ++ D +KT+ P FD+ ++N PY ISSPLV KL+ + R
Sbjct: 92 MGAELTKRVHGTPQEKKLEILLGDFIKTDLPYFDVCISNTPYQISSPLVFKLLNQPRPPR 151
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ L+ Q+EFA RL+A PGD + RL+ NV++ A+V +M V K +F P P+V+SSVV I
Sbjct: 152 VSILMFQREFAMRLVARPGDELYCRLSANVQMWANVTHIMKVGKNNFRPPPQVESSVVRI 211
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
K P+++ +EW R F +KNKT+ A FK +I++L
Sbjct: 212 EVKNPRPNIDFNEWDGLLRIVFVRKNKTIAAGFKS-SNIIDIL 253
>gi|396081192|gb|AFN82810.1| dimethyladenosine transferase [Encephalitozoon romaleae SJ-2008]
Length = 277
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/215 (45%), Positives = 141/215 (65%), Gaps = 3/215 (1%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+K GQHIL N V+D+I+ ++ I P D VLE+G GTGNLT+KLL+ +KKV EID R
Sbjct: 6 FNKQHGQHILKNLGVIDTIIERARIKPTDVVLEVGGGTGNLTMKLLQKAKKVICYEIDPR 65
Query: 64 MV-EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSF 122
+ E+ R G + + DALK +FP FDL + N+PY ISSP + KL+ +F
Sbjct: 66 LAAELAKRVNGVPGMAQKFQLFVGDALKHDFPHFDLCITNLPYQISSPFMFKLL--KYNF 123
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
+ A ++ Q+EF+ RL+A PG+ E+ RL+V +++A ++ V+ VSK F+P PKV+SS V
Sbjct: 124 KCAYIMFQREFSDRLVARPGNPEYCRLSVGAQMLAQIDHVLKVSKNSFVPPPKVESSFVR 183
Query: 183 IRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I P+ P ++ +E+ F + CF +KNKTL A FK
Sbjct: 184 IEPRIPRPPIDFEEFDRFLKICFLRKNKTLRANFK 218
>gi|156084308|ref|XP_001609637.1| dimethyladenosine transferase protein [Babesia bovis T2Bo]
gi|154796889|gb|EDO06069.1| dimethyladenosine transferase protein, putative [Babesia bovis]
Length = 366
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/216 (45%), Positives = 141/216 (65%), Gaps = 1/216 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+K GQH+L N +LD I+ + I DTVLEIGPGTGNLT++L+ +++KV AI+ID R
Sbjct: 49 FNKKFGQHMLKNPGILDKIILAAEIRSSDTVLEIGPGTGNLTIRLVPLARKVIAIDIDNR 108
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
MV + +R G+ + L+VI DAL+ +P+FD+ AN+PY ISSP V KL+ FR
Sbjct: 109 MVGEVKKRCLSMGYSN-LDVIEGDALRITYPKFDVCTANLPYQISSPFVFKLLSHRPLFR 167
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A L+ QKEFA RLLAS ++++ RLA+N +L V V V+ F P PKVDS +V I
Sbjct: 168 CAVLMFQKEFAERLLASTNEAKYGRLAINTRLFCTVTRVCKVAPGSFNPPPKVDSMIVKI 227
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQK 219
P+ + ++ EW R CF++K +TL + FK++
Sbjct: 228 VPREQPLVIDFVEWDGMIRVCFTRKRRTLRSLFKKQ 263
>gi|225563099|gb|EEH11378.1| dimethyladenosine transferase dimethyltransferase [Ajellomyces
capsulatus G186AR]
gi|240279925|gb|EER43430.1| dimethyladenosine transferase dimethyltransferase [Ajellomyces
capsulatus H143]
Length = 384
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 138/218 (63%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQH+L N V +IV K+ + DTVLEIGPGTGNLT+K+LE +KKV A+E+D RM +
Sbjct: 39 GQHVLKNPGVAQAIVDKADLKQSDTVLEIGPGTGNLTVKILEKAKKVIAVELDPRMAAEV 98
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
+R RL V+ D +KT+ P FD+ ++N PY ISSPL KL+ + R L+
Sbjct: 99 TKRVQGKPEQKRLEVLLGDVIKTDLPYFDVCISNTPYQISSPLTFKLLATNPAPRVCILM 158
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q+EFA RL A PGD ++RL+VN ++ A ++ +M V K +F P P V+SSVV I PK
Sbjct: 159 FQREFAMRLFAKPGDKLYSRLSVNAQMWARIDHIMKVGKNNFKPPPAVESSVVRIVPKNP 218
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
P ++ DEW R F +KNKT+ ++F V+++L
Sbjct: 219 RPQISYDEWDGLLRVAFVRKNKTMRSSFLGTTSVLDML 256
>gi|343427662|emb|CBQ71189.1| probable rRNA (adenine-N6,N6-)-dimethyltransferase [Sporisorium
reilianum SRZ2]
Length = 334
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/225 (44%), Positives = 144/225 (64%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
IF GQHIL N V IV K+++ P D VLE+GPGTGNLT+++LE +KK +E+D
Sbjct: 49 IFNTDKFGQHILKNPLVAQGIVDKANLKPTDMVLEVGPGTGNLTVRILEKAKKTTVVEMD 108
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RM L++R +L+++ D KTE P FD+ ++N PY ISSPLV KL+
Sbjct: 109 PRMAAELSKRVQGKPEQRKLDIMIGDFCKTELPYFDVCISNTPYQISSPLVFKLLSHRPL 168
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD+ + RL+ NV+L + V+ +M VS+ F P P+V+SSVV
Sbjct: 169 FRCAILMFQREFALRLIARPGDNLWCRLSANVQLYSKVDHIMKVSRNSFRPPPQVESSVV 228
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
I P P + +E+ TR FS++NKT+ A+F + V+++L
Sbjct: 229 RITPLNPPPAIPFEEFDGLTRIVFSRRNKTVRASFFDARGVLDML 273
>gi|159107917|ref|XP_001704233.1| Dimethyladenosine transferase [Giardia lamblia ATCC 50803]
gi|157432290|gb|EDO76559.1| Dimethyladenosine transferase [Giardia lamblia ATCC 50803]
Length = 316
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 108/218 (49%), Positives = 138/218 (63%), Gaps = 4/218 (1%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQH+L N V+ SIV K+ I DTVLEIGPGTGNLTL LLE ++ V AIEID RMV
Sbjct: 8 KQHGQHLLANPLVIKSIVEKAEIRSTDTVLEIGPGTGNLTLALLEKARHVIAIEIDPRMV 67
Query: 66 EILNRR-AADSGFHDRLNVISKDALK---TEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
L +R AA + + +I KD K +E P FDL V+N PY ISS +V +L+
Sbjct: 68 SELKKRIAAIPEYRGKFTIIHKDFTKMPPSEIPPFDLCVSNCPYNISSGIVFRLLEIQPL 127
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
R L+ Q EFA+RL A PG +++RL VN KL++ + ++ VS+ F P P VDS+VV
Sbjct: 128 PRKFVLMFQLEFAQRLAAEPGQDQYSRLTVNTKLLSKTKIIIRVSRNSFKPPPNVDSAVV 187
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQK 219
+ P P ++LDE+ TR FSKKNKTLGA FK K
Sbjct: 188 EMYPVGPPPGLDLDEFNGLTRILFSKKNKTLGAIFKTK 225
>gi|429962918|gb|ELA42462.1| dimethyladenosine transferase [Vittaforma corneae ATCC 50505]
Length = 278
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/213 (45%), Positives = 145/213 (68%), Gaps = 3/213 (1%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS+GQHIL N ++D+I+ K+ + DTVLEIG GTG++TLKLL+ +KKV A E D+++
Sbjct: 8 KSEGQHILKNHGLIDTIIEKAHVKHTDTVLEIGAGTGSITLKLLQKAKKVIAYETDKKLA 67
Query: 66 -EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRS 124
E++++ + F ++L +I + L+ P FDL ++NIP+ IS P++ KL+ + F+
Sbjct: 68 RELIHKVNMAAEFKNKLELIQSNVLRQNIPHFDLCISNIPFNISCPIILKLI--SYDFKC 125
Query: 125 ATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIR 184
A +L+QKEF RL A PG E++RL+V V+L+A+VE VM VSK F+P PKVD+ + I
Sbjct: 126 AYILVQKEFGDRLTARPGSDEYSRLSVIVQLLANVEHVMKVSKNSFMPPPKVDTCFMKIE 185
Query: 185 PKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
PK P +N++E+ + CF +KNKTL A K
Sbjct: 186 PKIPRPPININEFDVLLKACFGRKNKTLLANLK 218
>gi|189192010|ref|XP_001932344.1| dimethyladenosine transferase dimethyltransferase [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187973950|gb|EDU41449.1| dimethyladenosine transferase dimethyltransferase [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 380
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/221 (44%), Positives = 139/221 (62%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQHIL N V +IV+K+ + D VLE+GPGTGNLT+ +L+ +K+V A+E+D RM
Sbjct: 38 KDLGQHILKNPGVATAIVQKAHLKQSDHVLEVGPGTGNLTVLILKAAKQVTAVEMDPRMA 97
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSA 125
L +R S RL + D +K E P+FD+ ++N PY ISSPLV KL+ R
Sbjct: 98 AELTKRVQGSPEEKRLTIRLGDVIKAELPRFDVCISNTPYQISSPLVFKLLALQHPPRCC 157
Query: 126 TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP 185
L+ Q+EFA RL A PG+ ++RL+VNV++ + V VM V + +F P P+V+S+VV I P
Sbjct: 158 ILMFQREFAMRLFARPGEKLYSRLSVNVQMWSKVSHVMKVGRNNFNPPPQVESNVVRIEP 217
Query: 186 KAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
K P + +EW R CF +KN+TL A+F V+ELL
Sbjct: 218 KNPRPQIAYEEWDGLLRICFVRKNRTLRASFLGTAAVLELL 258
>gi|345564824|gb|EGX47784.1| hypothetical protein AOL_s00083g292 [Arthrobotrys oligospora ATCC
24927]
Length = 387
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 97/213 (45%), Positives = 136/213 (63%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
+K GQHIL N ++D I+ K+++ D VLE+GPGTGNLT+K+LE ++KV A+E+D R
Sbjct: 44 MNKDMGQHILINPGIVDRIIDKAALKQSDVVLEVGPGTGNLTMKILENARKVIAVEMDPR 103
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R +L ++ D +KTE P FD+ ++N PY ISSPLV KL+ R
Sbjct: 104 MAAELTKRVQGKPVERKLEILLGDVIKTELPYFDVCISNTPYQISSPLVFKLLALPTPPR 163
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
L+ QKEFA RL A PGD+ ++RL+ NV++ + V VM V K +F P P+V+S+VV I
Sbjct: 164 MCVLMFQKEFADRLTAQPGDAFYSRLSANVQMWSKVTHVMKVGKGNFKPPPQVESAVVKI 223
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATF 216
PK P V+ +EW R F +KNKT+ A F
Sbjct: 224 EPKVPRPTVSYEEWDGMLRILFIRKNKTISAVF 256
>gi|325093055|gb|EGC46365.1| dimethyladenosine transferase dimethyltransferase [Ajellomyces
capsulatus H88]
Length = 384
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 137/218 (62%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQH+L N V +IV K+ + DTVLEIGPGTGNLT+K+LE +KKV A+E+D RM +
Sbjct: 39 GQHVLKNPGVAQAIVDKADLKQSDTVLEIGPGTGNLTVKILEKAKKVIAVELDPRMAAEV 98
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
+R RL V+ D +KT+ P FD+ ++N PY ISSPL KL+ + R L+
Sbjct: 99 TKRVQGKPEQKRLEVLLGDVIKTDLPYFDVCISNTPYQISSPLTFKLLATNPAPRVCILM 158
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q+EFA RL A PGD ++RL+VN ++ A ++ +M V K +F P P V+SSVV I PK
Sbjct: 159 FQREFAMRLFAKPGDKLYSRLSVNAQMWARIDHIMKVGKNNFKPPPAVESSVVRIVPKNP 218
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
P ++ DEW R F +KNKT+ ++F V+ +L
Sbjct: 219 RPQISYDEWDGLLRVAFVRKNKTMRSSFLGTTSVLNML 256
>gi|327348821|gb|EGE77678.1| dimethyladenosine transferase dimethyltransferase [Ajellomyces
dermatitidis ATCC 18188]
Length = 383
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 99/218 (45%), Positives = 138/218 (63%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQHIL N V +IV K+ + DTVLEIGPGTGNLT+K+LE +KKV A+E+D RM +
Sbjct: 39 GQHILKNPGVAQAIVDKADLKQSDTVLEIGPGTGNLTVKILEKAKKVIAVELDPRMAAEV 98
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
+R RL V+ D +KT+ P FD+ ++N PY ISSPL KL+ + R L+
Sbjct: 99 TKRVQGKPEQKRLEVLLGDVIKTDLPYFDVCISNTPYQISSPLTFKLLAIDPAPRVCILM 158
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q+EFA RL A PGD ++RL+VN ++ A ++ +M V K +F P P V+SSVV I PK
Sbjct: 159 FQREFAMRLFAKPGDKLYSRLSVNAQMWARIDHIMKVGKNNFKPPPAVESSVVRIVPKNP 218
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
P ++ DEW R F +KNKT+ ++F V+++L
Sbjct: 219 RPQISYDEWDGLLRVAFVRKNKTMRSSFLGTTSVLDML 256
>gi|71013449|ref|XP_758591.1| hypothetical protein UM02444.1 [Ustilago maydis 521]
gi|46098249|gb|EAK83482.1| hypothetical protein UM02444.1 [Ustilago maydis 521]
Length = 334
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 100/225 (44%), Positives = 144/225 (64%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
IF GQHIL N V IV K+++ P D VLE+GPGTGNLT+++LE +KK +E+D
Sbjct: 49 IFNTDKFGQHILKNPLVAQGIVDKANLKPTDMVLEVGPGTGNLTVRILEKAKKTTVVEMD 108
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RM L++R +L+++ D KT+ P FD+ ++N PY ISSPLV KL+
Sbjct: 109 PRMAAELSKRVQGKPEQRKLDIMLGDFCKTDLPYFDVCISNTPYQISSPLVFKLLSHRPL 168
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD+ + RL+ NV+L + V+ +M VS+ F P P+V+SSVV
Sbjct: 169 FRCAILMFQREFALRLIARPGDNLWCRLSANVQLYSKVDHIMKVSRNSFRPPPQVESSVV 228
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
I P P + +E+ TR FS++NKT+ A+F + VI++L
Sbjct: 229 RITPLNPPPAIPFEEFDGLTRIVFSRRNKTVRASFFDARGVIDML 273
>gi|330912552|ref|XP_003295983.1| hypothetical protein PTT_04321 [Pyrenophora teres f. teres 0-1]
gi|311332221|gb|EFQ95920.1| hypothetical protein PTT_04321 [Pyrenophora teres f. teres 0-1]
Length = 380
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 99/221 (44%), Positives = 139/221 (62%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQHIL N V +IV+K+ + D VLE+GPGTGNLT+ +L+ +K+V A+E+D RM
Sbjct: 38 KDLGQHILKNPGVATAIVQKAHLKQSDHVLEVGPGTGNLTVLILKAAKQVTAVEMDPRMA 97
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSA 125
L +R S RL + D +K E P+FD+ ++N PY ISSPLV KL+ R
Sbjct: 98 AELTKRVQGSPEEKRLTIRLGDVIKAELPRFDVCISNTPYQISSPLVFKLLALQHPPRCC 157
Query: 126 TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP 185
L+ Q+EFA RL A PG+ ++RL+VNV++ + V VM V + +F P P+V+S+VV I P
Sbjct: 158 ILMFQREFAMRLFARPGEKLYSRLSVNVQMWSKVSHVMKVGRNNFNPPPQVESNVVRIEP 217
Query: 186 KAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
K P + +EW R CF +KN+TL A+F V+ELL
Sbjct: 218 KNPRPQIAYEEWDGLLRICFVRKNRTLRASFLGTAAVLELL 258
>gi|452002575|gb|EMD95033.1| hypothetical protein COCHEDRAFT_1201497 [Cochliobolus
heterostrophus C5]
Length = 383
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 99/221 (44%), Positives = 138/221 (62%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQHIL N V +IV+K+ + D VLE+GPGTGNLT+ +L+ K+V A+E+D RM
Sbjct: 38 KDLGQHILKNPGVATAIVQKAHLKQSDHVLEVGPGTGNLTVLILKAVKQVTAVEMDPRMA 97
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSA 125
L +R S RL + D +K E P+FD+ ++N PY ISSPLV KL+ R
Sbjct: 98 AELTKRVQGSPEEKRLTIRLGDVIKAELPRFDVCISNTPYQISSPLVFKLLALQHPPRCC 157
Query: 126 TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP 185
L+ Q+EFA RL A PG+ ++RL+VNV++ + V VM V + +F P P+V+S+VV I P
Sbjct: 158 VLMFQREFAMRLFARPGEKLYSRLSVNVQMWSKVSHVMKVGRNNFNPPPQVESNVVRIEP 217
Query: 186 KAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
K P + +EW R CF +KN+TL A+F V+ELL
Sbjct: 218 KNPRPQIAYEEWDGLLRICFVRKNRTLRASFMGTAAVLELL 258
>gi|308160049|gb|EFO62557.1| Dimethyladenosine transferase [Giardia lamblia P15]
Length = 319
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 108/218 (49%), Positives = 137/218 (62%), Gaps = 4/218 (1%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQH+L N V+ SIV K+ I DTVLEIGPGTGNLTL LLE +K V A+EID RMV
Sbjct: 8 KQHGQHLLANPLVIKSIVEKAEIRSTDTVLEIGPGTGNLTLALLEKAKHVIAVEIDPRMV 67
Query: 66 EILNRR-AADSGFHDRLNVISKDALK---TEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
L +R AA + + VI KD K E P FDL V+N PY ISS +V +L+
Sbjct: 68 SELKKRIAAIPEYRGKFTVIHKDFTKMPPNEIPPFDLCVSNCPYNISSGIVFRLLEIQPL 127
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
R L+ Q EFA+RL A PG +++RL VN KL++ + ++ VS+ F P P VDS+VV
Sbjct: 128 PRKFVLMFQLEFAQRLAAEPGQDQYSRLTVNTKLLSKTKIIIRVSRNSFKPPPNVDSAVV 187
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQK 219
+ P P ++LDE+ TR FSKKNKTLGA FK +
Sbjct: 188 EMYPVGPPPGLDLDEFNGLTRILFSKKNKTLGAIFKTR 225
>gi|209877254|ref|XP_002140069.1| dimethyladenosine transferase protein [Cryptosporidium muris RN66]
gi|209555675|gb|EEA05720.1| dimethyladenosine transferase protein, putative [Cryptosporidium
muris RN66]
Length = 361
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 136/216 (62%), Gaps = 1/216 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ K KGQH+L N +LD IV S I P D VLEIGPGTGNLT++LL +++KV A +ID
Sbjct: 50 VMLDKKKGQHLLKNPGILDKIVEASDIKPTDIVLEIGPGTGNLTMRLLPLARKVIAFDID 109
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV + +R+ ++G+++ L V DAL+++ +FD+ AN+PY ISSP V +++ +
Sbjct: 110 PRMVAEVKKRSMNAGYNN-LEVKEGDALRSDLGKFDICTANLPYQISSPFVFRILSHKPT 168
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RLLA PGD + RL +N KL+ V V V F P PKV+S VV
Sbjct: 169 FRCAVLMFQEEFALRLLAEPGDKHYCRLTLNTKLLCKVIRVCKVLPGSFNPPPKVNSMVV 228
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
PK VN EW R CF +K KT+ A FK
Sbjct: 229 KFIPKTCPIPVNFREWDGLMRICFLRKKKTIRANFK 264
>gi|452981670|gb|EME81430.1| hypothetical protein MYCFIDRAFT_155610 [Pseudocercospora fijiensis
CIRAD86]
Length = 383
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 100/219 (45%), Positives = 138/219 (63%), Gaps = 1/219 (0%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQHIL N V +IV K+ + D VLEIGPGTGNLT ++LE +KKV A+E+D RM +
Sbjct: 43 GQHILKNPGVAQAIVDKADVKQSDVVLEIGPGTGNLTARILEKAKKVVAVEMDPRMASEI 102
Query: 69 NRRAADSGFHDRLNVISKDALKTE-FPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATL 127
+R + RL++I D +K E P FD+ ++N PY ISSPL KL+ + S RS L
Sbjct: 103 TKRFQGTPAAKRLDLILGDVIKMEKLPYFDVCISNTPYQISSPLTFKLLATSPSPRSCVL 162
Query: 128 LLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKA 187
+ Q+EFA RL A PGD ++RL+VN ++ A V+ VM V K +F P P+V+S+VV I PK
Sbjct: 163 MFQREFAMRLFAKPGDKLYSRLSVNCQMWAKVDHVMKVGKNNFNPPPQVESNVVRISPKN 222
Query: 188 EIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
P ++ DEW R CF +KN+ L + F V+ +L
Sbjct: 223 PRPQISYDEWDGLLRVCFVRKNRVLRSAFIGTNTVMAML 261
>gi|392563536|gb|EIW56715.1| rRNA adenine dimethylase [Trametes versicolor FP-101664 SS1]
Length = 322
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 103/225 (45%), Positives = 142/225 (63%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
IF + GQHIL N + SIV +S+ P D VLE+GPGTGNLT+++LE +K V A+E+D
Sbjct: 37 IFNTERFGQHILKNPQTAQSIVDTASLRPSDKVLEVGPGTGNLTVRILEKAKHVTAVEMD 96
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RM L +R +L +I D +K E P FD+ ++N PY ISSPLV +L+
Sbjct: 97 PRMAAELTKRVQGKPEQRKLEIIIGDFVKAELPYFDVCISNTPYQISSPLVFRLLSHRPI 156
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A+PG ++RL+ NV+L A V+ VM VSK +F P PKV+SSVV
Sbjct: 157 FRVAVLMFQREFATRLVATPGSVLWSRLSANVQLYAKVDLVMHVSKNNFRPPPKVESSVV 216
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
+ P+ P V E+ R F ++NK + A F Q K V+E+L
Sbjct: 217 RLVPRDPPPPVEFAEFDGLGRIIFGRRNKHIHANF-QAKGVLEML 260
>gi|399217042|emb|CCF73729.1| unnamed protein product [Babesia microti strain RI]
Length = 361
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 99/214 (46%), Positives = 136/214 (63%), Gaps = 1/214 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K GQH+L N +LD IV+ + I DTVLEIGPGTGNLT++L+ ++++V ++EID R
Sbjct: 59 FEKKIGQHMLKNPGILDKIVQAAQIRSSDTVLEIGPGTGNLTIRLVPLARQVISLEIDSR 118
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
MV + RR GF + L VI +AL+ + P+FD+ AN+PY ISSP V KL+ +R
Sbjct: 119 MVSEVKRRCLQMGFQN-LTVIEGNALRIDLPRFDVCTANLPYQISSPFVFKLMAHPHPYR 177
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A L+ QKEFA RLLA+ + ++ RLA+N +L V V VS F P P V+S +V I
Sbjct: 178 CAILMFQKEFAERLLANVNEDKYGRLAINTRLFCTVSRVCKVSPGSFNPPPNVESMIVKI 237
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
P+ E V+ EW A R CFS+K +TL + K
Sbjct: 238 VPRPEPLVVDFHEWDAMIRICFSRKRRTLRSLLK 271
>gi|451853007|gb|EMD66301.1| hypothetical protein COCSADRAFT_296905 [Cochliobolus sativus
ND90Pr]
Length = 383
Score = 193 bits (490), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 99/221 (44%), Positives = 138/221 (62%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQHIL N V +IV+K+ + D VLE+GPGTGNLT+ +L+ K+V A+E+D RM
Sbjct: 38 KDLGQHILKNPGVATAIVQKAHLKQSDHVLEVGPGTGNLTVLILKAVKQVTAVEMDPRMA 97
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSA 125
L +R S RL + D +K E P+FD+ ++N PY ISSPLV KL+ R
Sbjct: 98 AELTKRVQGSPEEKRLTIRLGDVIKAELPRFDVCISNTPYQISSPLVFKLLALQYPPRCC 157
Query: 126 TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP 185
L+ Q+EFA RL A PG+ ++RL+VNV++ + V VM V + +F P P+V+S+VV I P
Sbjct: 158 VLMFQREFAMRLFARPGEKLYSRLSVNVQMWSKVSHVMKVGRNNFNPPPQVESNVVRIEP 217
Query: 186 KAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
K P + +EW R CF +KN+TL A+F V+ELL
Sbjct: 218 KNPRPQIAYEEWDGLLRICFVRKNRTLRASFMGTAAVLELL 258
>gi|119482754|ref|XP_001261405.1| dimethyladenosine transferase [Neosartorya fischeri NRRL 181]
gi|119409560|gb|EAW19508.1| dimethyladenosine transferase [Neosartorya fischeri NRRL 181]
Length = 393
Score = 192 bits (489), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 98/220 (44%), Positives = 141/220 (64%), Gaps = 3/220 (1%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ GQHIL N + D+IV K+++ P TVLE+GPGTG LT ++LE +KKV A+E+D R
Sbjct: 35 FNTDIGQHILKNPTIADAIVDKANVQPSQTVLEVGPGTGILTTRILEKAKKVIAVELDPR 94
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEF---PQFDLVVANIPYGISSPLVAKLVYGTK 120
M + + + +L VI D +KT+ P F + ++N PY ISSPL+ KL+
Sbjct: 95 MAAEVTKTVQGTPAEKKLQVILGDFVKTDLSKLPPFQICISNTPYQISSPLIFKLLSMPN 154
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
++ L++Q+EFA RL+A PGDS ++RL+VN + + + VM V K +F P P+V+SSV
Sbjct: 155 PPKTCILMVQREFALRLIARPGDSLYSRLSVNAQFFSRISHVMKVGKNNFRPPPQVESSV 214
Query: 181 VIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKK 220
V I PKA+ P+++ DEW R CF +KNKTL A F K
Sbjct: 215 VRIEPKADRPNISWDEWDGMLRICFVRKNKTLRAGFMATK 254
>gi|213406479|ref|XP_002174011.1| dimethyladenosine transferase [Schizosaccharomyces japonicus
yFS275]
gi|212002058|gb|EEB07718.1| dimethyladenosine transferase [Schizosaccharomyces japonicus
yFS275]
Length = 307
Score = 192 bits (489), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 106/223 (47%), Positives = 144/223 (64%), Gaps = 1/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+K GQHIL N V IV KS + DTVLE+GPGTGNLT+++LE KKV A+E+D R
Sbjct: 24 FNKDFGQHILKNPLVAQGIVDKSDLKQSDTVLEVGPGTGNLTVRILEKVKKVTAVEMDPR 83
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R + +LN++ D +KTE P FD+ ++N PY ISSPLV KL+ + R
Sbjct: 84 MAAELTKRVQGTPQEKKLNILLGDVIKTELPYFDVCISNTPYQISSPLVFKLLKHRPAPR 143
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A L+ Q+EFA RL+A PGD + RL+ NV++ A V+ +M V K +F P P+V+SSVV I
Sbjct: 144 LAVLMFQREFALRLVAKPGDPLYCRLSANVQMWAHVKHIMKVGKNNFRPPPQVESSVVRI 203
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
PK P ++ DEW R F +KNKT+ A FK V+E++
Sbjct: 204 EPKIPPPPIDFDEWDGLLRIVFLRKNKTINACFK-TGSVLEMM 245
>gi|70987085|ref|XP_749024.1| dimethyladenosine transferase [Aspergillus fumigatus Af293]
gi|66846654|gb|EAL86986.1| dimethyladenosine transferase [Aspergillus fumigatus Af293]
gi|159123206|gb|EDP48326.1| dimethyladenosine transferase [Aspergillus fumigatus A1163]
Length = 392
Score = 192 bits (489), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 97/220 (44%), Positives = 141/220 (64%), Gaps = 3/220 (1%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ GQHIL N + D+IV K+++ P TVLE+GPGTG LT ++LE +KKV A+E+D R
Sbjct: 34 FNTDIGQHILKNPTIADAIVDKANVQPSQTVLEVGPGTGILTTRILEKAKKVIAVELDPR 93
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEF---PQFDLVVANIPYGISSPLVAKLVYGTK 120
M + + + +L VI D +KT+ P F + ++N PY ISSPL+ KL+
Sbjct: 94 MAAEVTKTVQGTPAEKKLQVILGDFVKTDLSKLPPFQICISNTPYQISSPLIFKLLSMPN 153
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
++ L++Q+EFA RL+A PGDS ++RL+VN + + + +M V K +F P P+V+SSV
Sbjct: 154 PPKTCILMVQREFALRLIARPGDSLYSRLSVNAQFFSRISHIMKVGKNNFRPPPQVESSV 213
Query: 181 VIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKK 220
V I PKA+ P+++ DEW R CF +KNKTL A F K
Sbjct: 214 VRIEPKADRPNISWDEWDGMLRICFVRKNKTLRAGFMATK 253
>gi|71028934|ref|XP_764110.1| dimethyladenosine transferase [Theileria parva strain Muguga]
gi|68351064|gb|EAN31827.1| dimethyladenosine transferase, putative [Theileria parva]
Length = 388
Score = 192 bits (489), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 106/236 (44%), Positives = 146/236 (61%), Gaps = 13/236 (5%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F K GQH+L N VLD I++ + I P DTVLEIGPGTGN T++L+ ++KKV AI++D
Sbjct: 68 MIFVKKYGQHMLKNPGVLDKIIKAAEIRPTDTVLEIGPGTGNWTVRLVTLAKKVVAIDVD 127
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RM+ + R G+ + L VI DAL+T FP+FD+ +AN+P+ ISSP + KL+
Sbjct: 128 ARMISEVKNRCFQLGYTN-LEVIEADALRTTFPKFDICMANLPFQISSPFIFKLLSHRPL 186
Query: 122 FR-----------SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDF 170
FR SA L+ QKEFA RLLAS D ++ RLA+N +L V + VS F
Sbjct: 187 FRYLFHYYYFALESAILVFQKEFAERLLASTNDDKYGRLAINTRLFCTVTRICKVSAGSF 246
Query: 171 LPCPKVDSSVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
P PKV+S VV I P+ + V+ EW R CFS+K +TL + FK K+ V+ +L
Sbjct: 247 NPPPKVESMVVKIVPREQPLVVDFGEWDGMIRICFSRKRRTLRSLFK-KQSVLSIL 301
>gi|300707711|ref|XP_002996053.1| hypothetical protein NCER_100912 [Nosema ceranae BRL01]
gi|239605315|gb|EEQ82382.1| hypothetical protein NCER_100912 [Nosema ceranae BRL01]
Length = 278
Score = 192 bits (489), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 93/215 (43%), Positives = 145/215 (67%), Gaps = 3/215 (1%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+K GQHIL N +D+I+ K+ I P D +LEIG GTGNLTLK++ KK+ E+D R
Sbjct: 6 FNKDLGQHILKNMGAIDTILEKAKIKPTDVILEIGGGTGNLTLKMIPKCKKLICYEMDPR 65
Query: 64 MV-EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSF 122
+ E++ + A+ + ++ + DA+K +FP FD+ ++N+PY ISSP + KL+ T +F
Sbjct: 66 LASELVKKINANREYANKFQLFIGDAMKHDFPYFDMCISNLPYQISSPFIFKLL--TYNF 123
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
+ A ++ QKEFA RL+A PG ++ RL+V+V+L+A V+ ++ + K F+P PKV+S+VV
Sbjct: 124 KCAYIMFQKEFADRLIARPGSQDYCRLSVSVQLLAQVDHILKIKKNSFVPPPKVESAVVR 183
Query: 183 IRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P +N +++ A + CF +KNKTL A F+
Sbjct: 184 IEPKIPKPVINFEDFDALLKICFLRKNKTLLANFR 218
>gi|148699068|gb|EDL31015.1| RIKEN cDNA D530005L17 [Mus musculus]
Length = 1620
Score = 192 bits (488), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 133/200 (66%)
Query: 18 VLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGF 77
V++SI+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D R+V L++R +
Sbjct: 147 VVESIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPL 206
Query: 78 HDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLLQKEFARRL 137
+L V+ D LK++ P FD VAN+PY ISSP V KL+ FR A L+ Q+EFA RL
Sbjct: 207 ASKLQVLVGDVLKSDLPFFDACVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRL 266
Query: 138 LASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAEIPDVNLDEW 197
+A PGD + RL++N +L+A V+ +M V K +F PKV+SSVV I PK P +N EW
Sbjct: 267 VAKPGDKLYCRLSINTQLLAHVDHLMKVGKNNFRLPPKVESSVVRIEPKNPPPPINFQEW 326
Query: 198 RAFTRTCFSKKNKTLGATFK 217
R F +KNKTL A FK
Sbjct: 327 DDLVRITFVRKNKTLSAAFK 346
>gi|224001108|ref|XP_002290226.1| dimethyladenosine transferase [Thalassiosira pseudonana CCMP1335]
gi|220973648|gb|EED91978.1| dimethyladenosine transferase [Thalassiosira pseudonana CCMP1335]
Length = 335
Score = 192 bits (488), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 101/218 (46%), Positives = 138/218 (63%)
Query: 5 HKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERM 64
+ S GQH L N V+ +IV K+ + P D++LEIGPGTGN+T+ LL+ SK V AIE D RM
Sbjct: 52 NTSLGQHFLKNPAVVTAIVAKAGLKPTDSILEIGPGTGNMTVPLLQQSKSVVAIEYDTRM 111
Query: 65 VEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRS 124
V + +R + +L VI DA+KT FP FD+ VAN+PY ISS LV KL+ FR
Sbjct: 112 VREVLKRVEGTSEERKLKVIQGDAIKTRFPFFDVCVANVPYQISSALVFKLLSHRPMFRC 171
Query: 125 ATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIR 184
A ++ Q+EFA RL A PG++ + RL+VN +L+A V+ +M V + +F P PKV+S VV I
Sbjct: 172 AVMMFQEEFALRLTARPGEALYCRLSVNTQLLAKVDQLMKVGRNNFRPPPKVESRVVRIE 231
Query: 185 PKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKV 222
+ P VN EW R F++KNKTL + K +
Sbjct: 232 LRNPPPPVNFTEWDGMIRLLFNRKNKTLRSVLMTKPTI 269
>gi|301110310|ref|XP_002904235.1| dimethyladenosine transferase [Phytophthora infestans T30-4]
gi|262096361|gb|EEY54413.1| dimethyladenosine transferase [Phytophthora infestans T30-4]
Length = 312
Score = 192 bits (488), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 138/218 (63%), Gaps = 2/218 (0%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQH L N ++ IV K++I D LE+GPGTGNLT+KLLE +K+V A+E D RMV L
Sbjct: 34 GQHFLKNPMIVTQIVAKAAIRGTDVCLEVGPGTGNLTVKLLEQAKRVVAVEFDPRMVAEL 93
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
+R + + L +I D ++ + P FD+ VAN+PY ISSP V KL+ FR A ++
Sbjct: 94 QKRIQHTEHINHLQIIHGDVMRVQLPFFDVCVANLPYQISSPFVFKLLAHRPMFRCAVVM 153
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q+EFA+RL A PGD + RL+VN +L+A V+ ++ V + +F P PKV+S VV I P+
Sbjct: 154 FQEEFAKRLSAKPGDELYCRLSVNTQLLAKVDQLLKVGRNNFRPPPKVESRVVRIEPRNP 213
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFKQKK--KVIE 224
P VN EW + F++KNKTL + F K K++E
Sbjct: 214 PPPVNFTEWDGMIKIIFNRKNKTLHSCFVTKSVLKILE 251
>gi|449544193|gb|EMD35167.1| hypothetical protein CERSUDRAFT_116634 [Ceriporiopsis subvermispora
B]
Length = 319
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/225 (44%), Positives = 142/225 (63%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
IF + GQHIL N + SIV +++ P D VLE+GPGTGNLT+K+LE +K V A+E+D
Sbjct: 34 IFNTERFGQHILKNPQTAQSIVDTANLRPTDKVLEVGPGTGNLTVKILEKAKHVTAVEMD 93
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RM L +R +L ++ D +K P FD+ ++N PY ISSPLV +L+
Sbjct: 94 PRMAAELTKRVQGKPEQRKLEIMIGDFVKATLPYFDVCISNTPYQISSPLVFRLLSHRPL 153
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR+A L+ Q+EFA RL+A PG + ++RL+ NV+L A V+ VM VSK +F P PKV+SSV+
Sbjct: 154 FRTAVLMFQREFAMRLVAQPGSNLWSRLSANVQLYAKVDLVMHVSKNNFRPPPKVESSVI 213
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
+ P+ P V E+ R F ++NKT+ A F Q K V E+L
Sbjct: 214 RLVPRDPPPPVEFGEFDGLGRILFGRRNKTIHANF-QAKGVHEML 257
>gi|348667578|gb|EGZ07403.1| putative dimethyladenosine transferase [Phytophthora sojae]
Length = 312
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 134/211 (63%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQH L N ++ IV K++I D LE+GPGTGNLT+KLLE +K+V A+E D RMV L
Sbjct: 34 GQHFLKNPMIVTQIVAKAAIRGTDVCLEVGPGTGNLTVKLLEQAKRVVAVEFDPRMVAEL 93
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
+R + + L +I D ++ + P FD+ VAN+PY ISSP V KL+ FR A ++
Sbjct: 94 QKRIQHTEHINHLQIIHGDVMRVQLPFFDVCVANLPYQISSPFVFKLLAHRPMFRCAVVM 153
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q+EFA+RL A PGD + RL+VN +L+A V+ ++ V + +F P PKV+S VV I P+
Sbjct: 154 FQEEFAKRLSAKPGDELYCRLSVNTQLLAKVDQLLKVGRNNFRPPPKVESRVVRIEPRNP 213
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFKQK 219
P VN EW + F++KNKTL + F K
Sbjct: 214 PPPVNFTEWDGMIKIIFNRKNKTLHSCFVTK 244
>gi|169625150|ref|XP_001805979.1| hypothetical protein SNOG_15844 [Phaeosphaeria nodorum SN15]
gi|111055562|gb|EAT76682.1| hypothetical protein SNOG_15844 [Phaeosphaeria nodorum SN15]
Length = 378
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 100/221 (45%), Positives = 138/221 (62%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQHIL N V +IV+K+ + D VLE+GPGTGNLT+ +L+ +K V A+E+D RM
Sbjct: 36 KDLGQHILKNPGVASAIVQKAFLKQSDHVLEVGPGTGNLTVLILKAAKAVTAVEMDPRMA 95
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSA 125
L +R + RL V+ D +KTE P FD+ ++N PY ISSPLV KL+ RS
Sbjct: 96 AELTKRVQGTPEAKRLKVMLGDVIKTELPHFDVCISNTPYQISSPLVFKLLSLPSPPRSC 155
Query: 126 TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP 185
L+ Q+EFA RL A PG+ ++RL+VNV++ A V +M V + +F P P V+S+VV I P
Sbjct: 156 ILMFQREFAMRLFAKPGEKLYSRLSVNVQMWAKVSHIMKVGRNNFNPPPLVESNVVRIEP 215
Query: 186 KAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
K P + +EW R F +KN+TL A+F V+ELL
Sbjct: 216 KFPRPQIAYEEWDGLLRIAFVRKNRTLRASFLGTAAVVELL 256
>gi|403414271|emb|CCM00971.1| predicted protein [Fibroporia radiculosa]
Length = 321
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/225 (44%), Positives = 142/225 (63%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
IF + GQHIL N + SIV +++ P D VLE+GPGTGNLT+++LE +K V A+E+D
Sbjct: 36 IFNTERFGQHILKNPQTAQSIVDTANLRPTDKVLEVGPGTGNLTVRILEKAKHVTAVEMD 95
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RM L +R +L ++ D +K P FD+ ++N PY ISSPLV +L+
Sbjct: 96 PRMAAELTKRVQGKPEQRKLEIMIGDFVKATLPYFDVCISNTPYQISSPLVFRLLSHRPL 155
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR+A L+ Q+EFA RL+A PG ++RL+ NV+L A V+ VM+VSK +F P PKV+SSV+
Sbjct: 156 FRTAILMFQREFALRLVARPGTELWSRLSANVQLYAKVDLVMNVSKNNFRPPPKVESSVI 215
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
+ P+ P V E+ R F +KNKT+ A F Q K V E+L
Sbjct: 216 RLVPRDPPPPVEFGEFDGLLRIVFGRKNKTVHANF-QAKGVTEML 259
>gi|453084962|gb|EMF13006.1| dimethyladenosine transferase [Mycosphaerella populorum SO2202]
Length = 385
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 98/224 (43%), Positives = 140/224 (62%), Gaps = 1/224 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ GQHIL N V +IV K+ + D VLEIGPGTGNLT ++LE +K+V A+E+D R
Sbjct: 39 FNTDLGQHILKNPGVAQAIVDKADVKQSDIVLEIGPGTGNLTTRILEKAKRVIAVEMDPR 98
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTE-FPQFDLVVANIPYGISSPLVAKLVYGTKSF 122
M L +R + +L ++ D +K E P FD+ ++N PY ISSPL KL+ + S
Sbjct: 99 MAAELTKRFQGTPAAKKLEIVLGDVIKMEKLPYFDICISNTPYQISSPLTFKLLATSPSP 158
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
RS L+ Q+EFA RL A PGD ++RL+VN ++ A V+ VM V + +F P P+V+S+VV
Sbjct: 159 RSCVLMFQREFAMRLFAKPGDKLYSRLSVNCQMWAKVDHVMKVGRNNFNPPPQVESNVVR 218
Query: 183 IRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
I PK P ++ +EW R CF +KNK L + F V+++L
Sbjct: 219 ISPKNPRPQISYEEWDGLLRVCFVRKNKVLRSEFLGTTSVMDML 262
>gi|321258494|ref|XP_003193968.1| rRNA (adenine-N6,N6-)-dimethyltransferase [Cryptococcus gattii
WM276]
gi|317460438|gb|ADV22181.1| rRNA (adenine-N6,N6-)-dimethyltransferase, putative [Cryptococcus
gattii WM276]
Length = 324
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/226 (46%), Positives = 141/226 (62%), Gaps = 1/226 (0%)
Query: 1 YIFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEI 60
++F GQHILTN V IV K+++ P D VLE+GPGTGNLT+++L +KV A+E+
Sbjct: 38 HLFDTAKFGQHILTNPLVAQGIVDKANLKPTDVVLEVGPGTGNLTVRILPACRKVVAVEM 97
Query: 61 DERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTK 120
D RM + +R +L +I D +K + P FD++++N PY ISSPLV KL+
Sbjct: 98 DPRMAAEVQKRVLGKPEQKKLELIVGDFVKADLPYFDVLISNTPYQISSPLVFKLLSQRP 157
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
R A L+ Q+EFA RL+A+P + RLA NV+L A VE VM V K +F P P+V+SSV
Sbjct: 158 IPRCAVLMFQREFALRLVATPNTKLWGRLAANVQLYARVEHVMKVGKGNFRPPPQVESSV 217
Query: 181 VIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
V I P+ P V +E+ R FS+ NKTL A FK K V+ELL
Sbjct: 218 VRIMPRDPPPPVKFEEFDGLNRIIFSRANKTLRAGFK-AKGVVELL 262
>gi|58259713|ref|XP_567269.1| rRNA (adenine-N6,N6-)-dimethyltransferase [Cryptococcus neoformans
var. neoformans JEC21]
gi|134116780|ref|XP_773062.1| hypothetical protein CNBJ3380 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255682|gb|EAL18415.1| hypothetical protein CNBJ3380 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229319|gb|AAW45752.1| rRNA (adenine-N6,N6-)-dimethyltransferase, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 325
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/226 (46%), Positives = 141/226 (62%), Gaps = 1/226 (0%)
Query: 1 YIFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEI 60
++F GQHILTN V IV K+++ P D VLE+GPGTGNLT+++L +KV A+E+
Sbjct: 39 HLFDTAKFGQHILTNPLVAQGIVDKANLKPTDVVLEVGPGTGNLTVRILPACRKVVAVEM 98
Query: 61 DERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTK 120
D RM + +R +L +I D +K + P FD++++N PY ISSPLV KL+
Sbjct: 99 DPRMAAEVQKRVLGKPEQKKLELIVGDFVKADLPYFDVLISNTPYQISSPLVFKLLSQRP 158
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
R A L+ Q+EFA RL+A+P + RLA NV+L A VE VM V K +F P P+V+SSV
Sbjct: 159 IPRCAVLMFQREFALRLVATPNTKLWGRLAANVQLYARVEHVMKVGKGNFRPPPQVESSV 218
Query: 181 VIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
V I P+ P V +E+ R FS+ NKTL A FK K V+ELL
Sbjct: 219 VRIMPRDPPPPVKFEEFDGLNRIIFSRANKTLRAGFK-AKGVVELL 263
>gi|405122880|gb|AFR97646.1| rRNA (adenine-N6,N6-)-dimethyltransferase [Cryptococcus neoformans
var. grubii H99]
Length = 325
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/226 (46%), Positives = 141/226 (62%), Gaps = 1/226 (0%)
Query: 1 YIFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEI 60
++F GQHILTN V IV K+++ P D VLE+GPGTGNLT+++L +KV A+E+
Sbjct: 39 HLFDTAKFGQHILTNPLVAQGIVDKANLKPTDVVLEVGPGTGNLTVRILPACRKVVAVEM 98
Query: 61 DERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTK 120
D RM + +R +L +I D +K + P FD++++N PY ISSPLV KL+
Sbjct: 99 DPRMAAEVQKRVLGKPEQKKLELIVGDFVKADLPYFDVLISNTPYQISSPLVFKLLSQRP 158
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
R A L+ Q+EFA RL+A+P + RLA NV+L A VE VM V K +F P P+V+SSV
Sbjct: 159 IPRCAVLMFQREFALRLVATPNTKLWGRLAANVQLYARVEHVMKVGKGNFRPPPQVESSV 218
Query: 181 VIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
V I P+ P V +E+ R FS+ NKTL A FK K V+ELL
Sbjct: 219 VRIMPRDPPPPVKFEEFDGLNRIIFSRANKTLRAGFK-AKGVVELL 263
>gi|121711417|ref|XP_001273324.1| dimethyladenosine transferase [Aspergillus clavatus NRRL 1]
gi|119401475|gb|EAW11898.1| dimethyladenosine transferase [Aspergillus clavatus NRRL 1]
Length = 393
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/220 (43%), Positives = 140/220 (63%), Gaps = 3/220 (1%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ GQHIL N + D+IV K++I P TVLE+GPG G LT ++L+ +KKV A+E+D R
Sbjct: 36 FNTDIGQHILKNPTIADAIVDKANIQPSQTVLEVGPGPGILTTRILQKAKKVVAVELDPR 95
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEF---PQFDLVVANIPYGISSPLVAKLVYGTK 120
M L + + +L ++ D +KT+ P F + ++N PY ISSPL+ KL+
Sbjct: 96 MAAELTKTVQATPAEKKLQIVLGDFVKTDLSKLPPFQICISNTPYQISSPLIFKLLSMPN 155
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
++ L++Q+EFA RL+A PGDS ++RL+VN + + + +M V K +F P P+V+SSV
Sbjct: 156 PPKTCVLMVQREFALRLIARPGDSLYSRLSVNAQFFSRISHIMKVGKNNFRPPPQVESSV 215
Query: 181 VIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKK 220
V + PKA+ PD++ DEW R CF +KNKTL A F K
Sbjct: 216 VRVEPKADRPDISWDEWDGMLRICFVRKNKTLRAGFMGTK 255
>gi|242210765|ref|XP_002471224.1| predicted protein [Postia placenta Mad-698-R]
gi|220729783|gb|EED83652.1| predicted protein [Postia placenta Mad-698-R]
Length = 322
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 98/225 (43%), Positives = 141/225 (62%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
IF + GQHIL N + SIV +++ P D VLE+GPGTGNLT+++LE +K V A+E+D
Sbjct: 37 IFNTERFGQHILKNPQTAQSIVDTANLRPTDKVLEVGPGTGNLTVRILEKAKHVTAVEMD 96
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RM L +R +L ++ D +K P FD+ ++N PY ISSPL+ +L+
Sbjct: 97 PRMAAELTKRVQGKPEQRKLEIMIGDFVKATLPYFDVCISNTPYQISSPLIFRLLSHRPL 156
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR+A L+ Q+EFA RL+A PG ++RL+ NV+L A V+ VM VSK +F P PKV+SSV+
Sbjct: 157 FRTAILMFQREFAMRLVARPGSEMWSRLSANVQLYAKVDLVMHVSKNNFRPPPKVESSVI 216
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
+ P+ P V E+ R F ++NK + A F Q K V+E+L
Sbjct: 217 RLVPRDPPPPVEFGEFDGLARIVFGRRNKMIHANF-QAKGVMEML 260
>gi|425766216|gb|EKV04840.1| Dimethyladenosine transferase [Penicillium digitatum PHI26]
gi|425779138|gb|EKV17227.1| Dimethyladenosine transferase [Penicillium digitatum Pd1]
Length = 404
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 98/236 (41%), Positives = 140/236 (59%), Gaps = 18/236 (7%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQH+L N + +IV K+ + D VLEIGPGTGNLT K+LE +KK A+E+D RM +
Sbjct: 38 GQHVLKNPGIAAAIVEKAELKQSDIVLEIGPGTGNLTAKILEKAKKCIAVELDPRMAAEV 97
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYG------------------ISSP 110
+R + + RL VI D +KTE P FD+ ++N PY ISSP
Sbjct: 98 TKRFQSTPYQKRLEVILGDVMKTELPYFDVCISNTPYQVQNPISPSNAVPESNKVKISSP 157
Query: 111 LVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDF 170
L KL+ + + RS L+ Q+EFA RL A PGD ++RL+VN ++ A ++ +M V K +F
Sbjct: 158 LTFKLLATSPAPRSCVLMFQREFALRLFAKPGDKLYSRLSVNAQMWAKIDHIMKVGKNNF 217
Query: 171 LPCPKVDSSVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
P P+V+SSV+ + PK P +N +EW R F +KNKTL ++F ++ELL
Sbjct: 218 KPPPQVESSVIRMVPKNPRPQINYEEWDGLLRIVFVRKNKTLRSSFIGTTSIMELL 273
>gi|401881467|gb|EJT45767.1| rRNA (adenine-N6,N6-)-dimethyltransferase [Trichosporon asahii var.
asahii CBS 2479]
gi|406701624|gb|EKD04740.1| rRNA (adenine-N6,N6-)-dimethyltransferase [Trichosporon asahii var.
asahii CBS 8904]
Length = 342
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 101/226 (44%), Positives = 141/226 (62%), Gaps = 2/226 (0%)
Query: 1 YIFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEI 60
++F + GQHILTN V IV K+ + P D VLE+GPGTGNLT+++L +KV A+E+
Sbjct: 42 HLFNTERFGQHILTNPLVAQGIVDKAELKPTDVVLEVGPGTGNLTVRILTACRKVTAVEM 101
Query: 61 DERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTK 120
D RM + +R + +L++I D +K + P FD+ ++N PY ISSPLV KL+
Sbjct: 102 DPRMAAEVQKRVLGTPQQKKLDIILGDFVKADLPYFDVCISNTPYQISSPLVFKLLSHRP 161
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
R A L+ Q+EFA RL A PG + RL+ NV++ A VE VM V K +F P P+V+SSV
Sbjct: 162 LIRCAVLMFQREFALRLCAKPGSKLWCRLSANVQMFARVEHVMKVGKGNFRPPPQVESSV 221
Query: 181 VIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQK--KKVIE 224
V I+P P V +E+ R FS+ +KTL A FK K K++IE
Sbjct: 222 VRIKPYNPPPAVKFEEFDGLNRIVFSRSHKTLRANFKAKGIKEMIE 267
>gi|67525711|ref|XP_660917.1| hypothetical protein AN3313.2 [Aspergillus nidulans FGSC A4]
gi|40744101|gb|EAA63281.1| hypothetical protein AN3313.2 [Aspergillus nidulans FGSC A4]
gi|259485718|tpe|CBF82976.1| TPA: dimethyladenosine transferase (AFU_orthologue; AFUA_7G04860)
[Aspergillus nidulans FGSC A4]
Length = 403
Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 96/220 (43%), Positives = 138/220 (62%), Gaps = 3/220 (1%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ GQHIL N + D+IV K+++ P TVLE+GPG G LT ++LE +KKV A+E D R
Sbjct: 39 FNTDLGQHILKNGAIADNIVDKANVQPSQTVLEVGPGPGILTTRILEKAKKVVAVEFDPR 98
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEF---PQFDLVVANIPYGISSPLVAKLVYGTK 120
M L +R + +L ++ D +KT+ P F + ++N PY ISSPL+ KL+
Sbjct: 99 MAAELTKRVQATPMEKKLQIVLGDFIKTDLSKLPPFQVCISNTPYQISSPLIFKLLSMPN 158
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
+ L++Q+EFA RLLA PGD+ ++RL+VNV+ + V +M V + +F P P+V+SSV
Sbjct: 159 PPKMCVLMVQREFALRLLARPGDALYSRLSVNVQFFSKVSHIMKVGRNNFRPPPQVESSV 218
Query: 181 VIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKK 220
V I PK P+++ DEW R CF +KNKTL A F K
Sbjct: 219 VRIEPKLGKPEISWDEWDGMLRICFVRKNKTLRAGFMATK 258
>gi|378734187|gb|EHY60646.1| dimethyladenosine transferase [Exophiala dermatitidis NIH/UT8656]
Length = 391
Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 92/218 (42%), Positives = 138/218 (63%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQH+L N V +IV K+ + D VLE+GPG+GNLT+K+LE +KK A+E+D RM +
Sbjct: 43 GQHVLKNPGVAQAIVDKADLKQSDIVLEVGPGSGNLTVKILEKAKKCIAVELDPRMAAEV 102
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
+R + RL+V+ D +KT+ P FD+ ++N PY ISSPL KL+ + + R L+
Sbjct: 103 TKRVQGTPQGKRLDVVLGDVIKTDLPYFDVCISNTPYQISSPLTFKLLATSPAPRVCILM 162
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q+EFA RL A PG ++RL+VN ++ A ++ +M V K +F P P V+SSV+ + PK
Sbjct: 163 FQREFAMRLFAKPGGKLYSRLSVNAQMWAKIDHIMKVGKNNFKPPPAVESSVIRMVPKNP 222
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
P+++ +EW R CF +KNKTL A F ++ +L
Sbjct: 223 RPNISYEEWDGLLRICFVRKNKTLRANFLGTTSIMNIL 260
>gi|167394422|ref|XP_001733536.1| dimethyladenosine transferase [Entamoeba dispar SAW760]
gi|165894697|gb|EDR22603.1| dimethyladenosine transferase, putative [Entamoeba dispar SAW760]
Length = 252
Score = 189 bits (480), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 100/198 (50%), Positives = 130/198 (65%), Gaps = 1/198 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
FHKS+GQHIL N + IV + + D VLEIGPGTGNLT+K+L KK+ AIEID R
Sbjct: 12 FHKSEGQHILKNPMIAQQIVDAAELRRTDVVLEIGPGTGNLTMKMLPFCKKLIAIEIDPR 71
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R + + + +L +I D LK E P FD+ V+N PY ISSPLV KL+ FR
Sbjct: 72 MAAELKKRVSVTDYVKKLEIIQGDFLKVELPYFDVCVSNTPYSISSPLVFKLLNHRPQFR 131
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
SA L+ Q+EFA RL+A PGD + RL+VN +L+ADV VM V + +F P PKV+SSVV +
Sbjct: 132 SAVLMFQREFAMRLVAKPGDPLYCRLSVNTQLLADVFHVMKVGRNNFKPPPKVESSVVRM 191
Query: 184 RPKAEIPDVNL-DEWRAF 200
P P +NL D+ + F
Sbjct: 192 IPVKPAPPLNLVDDGKKF 209
>gi|294872243|ref|XP_002766218.1| dimethyladenosine transferase, putative [Perkinsus marinus ATCC
50983]
gi|239866886|gb|EEQ98935.1| dimethyladenosine transferase, putative [Perkinsus marinus ATCC
50983]
Length = 354
Score = 189 bits (480), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 104/223 (46%), Positives = 140/223 (62%), Gaps = 3/223 (1%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
K GQH+L N +LD I+ S I DTVLEIGPGTGNLT++LLE++KKV A+EID R
Sbjct: 49 LQKKFGQHLLKNPGILDKIIEASDIKSTDTVLEIGPGTGNLTMRLLELAKKVVALEIDPR 108
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M + +RA +G + L VI DALKT+FP FD+ VAN+PY ISSP KL+ FR
Sbjct: 109 MAAEVKKRAQTAGRMN-LKVIEGDALKTQFPVFDVCVANLPYQISSPFTFKLLAHRPVFR 167
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
++ QKEF RL+A G+ + RLA+N +L + V V +VSK F P P+VDS +V
Sbjct: 168 CGVIMFQKEFGERLVARVGEDNYGRLAINCQLFSKVTRVCNVSKGSFNPPPEVDSMIVKF 227
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKK--KVIE 224
+ +V+ E+ R F++KNKTL ++F K KV+E
Sbjct: 228 VLHKDPINVDFPEFDGLLRVAFTRKNKTLHSSFMNKAVVKVLE 270
>gi|397635583|gb|EJK71922.1| hypothetical protein THAOC_06596 [Thalassiosira oceanica]
Length = 340
Score = 189 bits (479), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 101/215 (46%), Positives = 138/215 (64%)
Query: 5 HKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERM 64
+ S GQH L N V+ +IV K++I P D+VLEIGPGTGN+T+ LL+ SK V AIE D RM
Sbjct: 54 NTSLGQHFLKNPAVVTAIVAKAAIKPTDSVLEIGPGTGNMTVPLLQQSKNVVAIEYDTRM 113
Query: 65 VEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRS 124
V + +R + +L VI DA+KT FP FD+ VAN+PY ISS LV KL+ FR
Sbjct: 114 VREVLKRVEGTSEERKLKVIQGDAIKTRFPFFDVCVANVPYQISSALVFKLLSHRPMFRC 173
Query: 125 ATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIR 184
+ ++ Q+EFA RL A PG++ + RL+VN +L+A V+ +M V + +F P PKV+S VV I
Sbjct: 174 SVMMFQEEFALRLTARPGEALYCRLSVNTQLLAKVDQLMKVGRNNFRPPPKVESRVVRIE 233
Query: 185 PKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQK 219
+ P V+ EW R F++KNKTL + K
Sbjct: 234 LRNPPPPVDFIEWDGMIRLLFNRKNKTLRSVLMTK 268
>gi|390596405|gb|EIN05807.1| rRNA adenine dimethylase [Punctularia strigosozonata HHB-11173 SS5]
Length = 323
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 100/225 (44%), Positives = 142/225 (63%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
IF + GQHIL N V IV K+++ P D VLE+GPGTGNLT+++LE +K V A+E+D
Sbjct: 38 IFNTERFGQHILKNPLVAQGIVDKANLRPTDQVLEVGPGTGNLTVRILEKAKHVTAVEMD 97
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RM L +R +L+++ D +K + P FD+ ++N PY ISSPLV +L+
Sbjct: 98 PRMAAELTKRVQGKPEQRKLSIMIGDFVKADLPYFDVCISNTPYQISSPLVFRLLSHRPL 157
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PG ++RL+ NV+L A V+ +M V K +F P P V+SSVV
Sbjct: 158 FRVAILMFQREFALRLVAQPGTDLWSRLSANVQLYAKVDHIMKVGKNNFRPAPNVESSVV 217
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
I P P V +E+ TR F +++KT+ A F Q K V+E+L
Sbjct: 218 RIVPLDPPPPVRFEEFDGLTRIIFGRRHKTVHANF-QAKGVMEML 261
>gi|328855713|gb|EGG04838.1| hypothetical protein MELLADRAFT_49047 [Melampsora larici-populina
98AG31]
Length = 333
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/226 (45%), Positives = 143/226 (63%), Gaps = 1/226 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
IF + GQHIL N V SIV K+++ D VLE+GPGTGNLT+K+LE KKV +E+D
Sbjct: 45 IFDTEKLGQHILKNPLVAQSIVDKANLKTTDQVLEVGPGTGNLTVKILEKCKKVLVVEMD 104
Query: 62 ERMVEILNRR-AADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTK 120
RM L++R +L+++ D LKT+ P FD+ ++N PY ISSPLV KL+
Sbjct: 105 PRMASELSKRFQGKPQEMKKLDILVGDFLKTDLPYFDVCISNTPYQISSPLVFKLLAHRP 164
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
FR A L+ Q+EFA RL A PG S + RL+VNV+L + V +M V K +F P P V+SSV
Sbjct: 165 IFRVAVLMFQREFALRLCARPGSSLWCRLSVNVQLYSKVNHLMKVGKANFRPPPLVESSV 224
Query: 181 VIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
+ + P P + +E+ TR CF+++NKT+ A+F K V ++L
Sbjct: 225 IKLEPINPPPAIKFEEFDGLTRICFNRRNKTIRASFFASKAVKDML 270
>gi|294899921|ref|XP_002776810.1| dimethyladenosine transferase, putative [Perkinsus marinus ATCC
50983]
gi|239884011|gb|EER08626.1| dimethyladenosine transferase, putative [Perkinsus marinus ATCC
50983]
Length = 354
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/223 (46%), Positives = 140/223 (62%), Gaps = 2/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
K GQH+L N +LD I+ S I DTVLEIGPGTGNLT++LLE++KKV A+EID R
Sbjct: 49 LQKKFGQHLLKNPGILDKIIEASDIKSTDTVLEIGPGTGNLTMRLLELAKKVVALEIDPR 108
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M + +RA +G + L VI DALKT FP FD+ VAN+PY ISSP KL+ FR
Sbjct: 109 MAAEVKKRAQTAGRMN-LKVIEGDALKTAFPVFDVCVANLPYQISSPFTFKLLAHRPVFR 167
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
++ QKEF RL+A G+ + RLA+N +L + V V +VSK F P P+VDS +V
Sbjct: 168 CGVIMFQKEFGERLVARVGEENYGRLAINCQLFSKVTRVCNVSKGSFNPPPEVDSMIVKF 227
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
+ +V+ E+ R F++KNKTL ++F K VI++L
Sbjct: 228 VLHKDPINVDFPEFDGLLRIAFTRKNKTLHSSF-MNKAVIKVL 269
>gi|219115097|ref|XP_002178344.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410079|gb|EEC50009.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 322
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/220 (45%), Positives = 141/220 (64%), Gaps = 1/220 (0%)
Query: 7 SKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVE 66
S GQH L N V+ SI+ K+ + D VLEIGPGTGN+T+ +L+ +KKV A+E D RMV
Sbjct: 42 SLGQHFLKNPAVISSIIDKAGLKATDVVLEIGPGTGNMTVPMLQRAKKVVALEFDSRMVR 101
Query: 67 ILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSAT 126
+ +R + +L VI DA+KT +P FD ++AN+PY ISS +V KL+ FR A
Sbjct: 102 EVLKRTEGTDLAHKLQVIQGDAMKTAWPFFDCMIANLPYQISSQVVFKLLSHRPMFRCAV 161
Query: 127 LLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPK 186
L+ Q+EFA RL A PG++ + RL+VN +L+A V+ ++ V K++F P PKV+S VV I K
Sbjct: 162 LMFQEEFALRLSARPGEALYCRLSVNTQLLAKVDQLLKVGKQNFRPPPKVESRVVRIELK 221
Query: 187 AEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
P VN EW R F++KNKTL + K V++LL
Sbjct: 222 NPPPPVNFTEWDGMIRLLFNRKNKTLRSVL-NTKSVMKLL 260
>gi|398396512|ref|XP_003851714.1| hypothetical protein MYCGRDRAFT_73499 [Zymoseptoria tritici IPO323]
gi|339471594|gb|EGP86690.1| hypothetical protein MYCGRDRAFT_73499 [Zymoseptoria tritici IPO323]
Length = 329
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/219 (44%), Positives = 135/219 (61%), Gaps = 1/219 (0%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQHIL N V +IV K+ + D VLE+GPGTGNLT ++LE +KKV +E D RM +
Sbjct: 41 GQHILKNPGVAQAIVDKADVKQSDIVLEVGPGTGNLTTRILEKAKKVICVEQDPRMAAEI 100
Query: 69 NRRAADSGFHDRLNVISKDALKT-EFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATL 127
+R + RL +I D +K E P FD+ ++N PY ISSPL KL+ + + RS L
Sbjct: 101 TKRFQGTPAAKRLELILGDVIKMPELPYFDVCISNTPYQISSPLTFKLLATSPAPRSCVL 160
Query: 128 LLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKA 187
+ Q+EFA RL A PGD ++RL+VN ++ A V+ VM V K +F P P+V+S+VV I PK
Sbjct: 161 MFQREFAMRLFAKPGDKLYSRLSVNCQMWAKVDHVMKVGKNNFNPPPQVESNVVRICPKN 220
Query: 188 EIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
P ++ DEW R CF +KN+ L + F V+ +L
Sbjct: 221 PRPQISYDEWDGLLRVCFVRKNRVLRSAFIGTTSVMAML 259
>gi|325179921|emb|CCA14323.1| dimethyladenosine transferase putative [Albugo laibachii Nc14]
Length = 311
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/210 (44%), Positives = 132/210 (62%)
Query: 7 SKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVE 66
S GQH L N + IV K+++ D LE+GPGTGNLT+K+L +KKV A+E D RM+
Sbjct: 32 SIGQHFLKNPMIAAQIVSKAALRSTDVCLEVGPGTGNLTMKILNQAKKVIAVEYDLRMIA 91
Query: 67 ILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSAT 126
+ +R ++ L VI D ++ + P FD+ +AN+PY ISSP V KL+ FR A
Sbjct: 92 EIQKRVQNTEHAKHLQVIHGDVIRVQLPFFDVCIANLPYQISSPFVFKLLAHRPMFRCAV 151
Query: 127 LLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPK 186
++ Q+EFA+RL A PGD + RL+VN +L+A V+ ++ V K +F P PKV+S VV I P+
Sbjct: 152 VMFQEEFAKRLSAKPGDQLYCRLSVNTQLLAKVDQLIKVGKNNFRPPPKVESRVVRIEPR 211
Query: 187 AEIPDVNLDEWRAFTRTCFSKKNKTLGATF 216
P VN EW + F++KNKTL A F
Sbjct: 212 NPPPPVNFVEWDGMIKILFNRKNKTLRACF 241
>gi|339240561|ref|XP_003376206.1| dimethyladenosine transferase [Trichinella spiralis]
gi|316975090|gb|EFV58549.1| dimethyladenosine transferase [Trichinella spiralis]
Length = 296
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/225 (44%), Positives = 139/225 (61%), Gaps = 10/225 (4%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F + GQHIL N +++SI+ K++I DT+ E+GPGTGNLT V A EID
Sbjct: 20 IPFKTTYGQHILKNPLIVNSIIEKAAIKQGDTIFEVGPGTGNLT---------VVACEID 70
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+ L +R S +L ++ DALK ++P FD+ VAN+P+ ISSP V +L+
Sbjct: 71 YRLAAELTKRVQGSALQSKLEILPGDALKVQWPFFDVCVANLPFQISSPFVFRLLLHRPP 130
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ QKEFA RL+A PGD + RL+VNV+L+A V V+ V + +F P PKVD++VV
Sbjct: 131 FRCAVLMFQKEFAERLVAKPGDRLYCRLSVNVQLLAKVNAVIRVGRNNFRPPPKVDATVV 190
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
K P ++ EW R F +KNK+L + FK KKV+++L
Sbjct: 191 RFELKMPPPPIDFQEWDGLLRIAFLRKNKSLSSAFKF-KKVLDML 234
>gi|393243729|gb|EJD51243.1| rRNA adenine dimethylase [Auricularia delicata TFB-10046 SS5]
Length = 322
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/225 (42%), Positives = 145/225 (64%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
IF + GQHIL N ++ IV K+++ P D VLE+GPGTGNLT+++LE +K+ AIE+D
Sbjct: 36 IFNTERFGQHILKNPQIAQDIVDKANLRPTDKVLEVGPGTGNLTVRILEKAKQCTAIEMD 95
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RM L +R + +L ++ D K + P FD+ ++N PY ISS +V +L+
Sbjct: 96 PRMAAELTKRVQGTPEQRKLEIMIGDFAKADLPYFDVCISNTPYQISSVIVFRLLSHRPL 155
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR+A L+ Q+EFA+RL+A PG + ++RL+ NV+L A V+ + V + +F P P+VDSSVV
Sbjct: 156 FRTAILMFQREFAQRLVARPGSALWSRLSANVQLYAKVDHIRQVDRNNFRPPPQVDSSVV 215
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
I P P V +E+ TR FS++NKT+ ++F K V+E+L
Sbjct: 216 RIVPLDPPPPVRFEEFDGLTRILFSRRNKTVRSSFFGAKGVVEML 260
>gi|221485301|gb|EEE23582.1| dimethyladenosine transferase, putative [Toxoplasma gondii GT1]
Length = 494
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/223 (45%), Positives = 141/223 (63%), Gaps = 2/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
K GQH+L NQ VLD IV+ + I DTVLEIGPGTGNLT++LL V+++V A+++D R
Sbjct: 170 LQKKFGQHLLKNQAVLDKIVQAADIRSSDTVLEIGPGTGNLTMRLLPVAREVVALDVDAR 229
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
MV + +RA +GF + L V DAL+++ FD+ AN+PY ISS + +L+ FR
Sbjct: 230 MVNEVKKRAISNGFMN-LAVRHGDALRSDLGVFDVCAANLPYQISSHFLLRLLAHRPPFR 288
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A L+ QKEF RL+A PGD + RLA NV L V+ V V + F P PKVDS VV +
Sbjct: 289 CAVLMFQKEFGERLMAQPGDKNYCRLAANVSLFCTVQRVCKVDAKHFTPPPKVDSVVVKV 348
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
P+ + DV+ EW R CF +KN+TL A F+ + ++ +L
Sbjct: 349 VPRPNLIDVDFKEWDGLMRICFGRKNRTLHALFR-RASILSML 390
>gi|237835739|ref|XP_002367167.1| dimethyladenosine transferase, putative [Toxoplasma gondii ME49]
gi|211964831|gb|EEB00027.1| dimethyladenosine transferase, putative [Toxoplasma gondii ME49]
gi|221506158|gb|EEE31793.1| dimethyladenosine transferase, putative [Toxoplasma gondii VEG]
Length = 494
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/223 (45%), Positives = 141/223 (63%), Gaps = 2/223 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
K GQH+L NQ VLD IV+ + I DTVLEIGPGTGNLT++LL V+++V A+++D R
Sbjct: 170 LQKKFGQHLLKNQAVLDKIVQAADIRSSDTVLEIGPGTGNLTMRLLPVAREVVALDVDAR 229
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
MV + +RA +GF + L V DAL+++ FD+ AN+PY ISS + +L+ FR
Sbjct: 230 MVNEVKKRAISNGFMN-LAVRHGDALRSDLGVFDVCAANLPYQISSHFLLRLLAHRPPFR 288
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A L+ QKEF RL+A PGD + RLA NV L V+ V V + F P PKVDS VV +
Sbjct: 289 CAVLMFQKEFGERLMAQPGDKNYCRLAANVSLFCTVQRVCKVDAKHFTPPPKVDSVVVKV 348
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
P+ + DV+ EW R CF +KN+TL A F+ + ++ +L
Sbjct: 349 VPRPNLIDVDFKEWDGLMRICFGRKNRTLHALFR-RASILSML 390
>gi|452840772|gb|EME42710.1| hypothetical protein DOTSEDRAFT_155683 [Dothistroma septosporum
NZE10]
Length = 382
Score = 186 bits (473), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 96/219 (43%), Positives = 135/219 (61%), Gaps = 1/219 (0%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQHIL N V +IV K+ + D VLE+GPGTGNLT ++LE +K+V A+E D RM L
Sbjct: 43 GQHILKNPGVAQAIVDKADVKQSDIVLEVGPGTGNLTTRILEKAKRVIAVEQDPRMAAEL 102
Query: 69 NRRAADSGFHDRLNVISKDALKTE-FPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATL 127
+R + RL +I D +K E P FD+ ++N PY ISSPL KL+ T R+ L
Sbjct: 103 TKRFQGTPMAKRLELILGDVIKMEQLPYFDVCISNTPYQISSPLTFKLLATTPGPRNCVL 162
Query: 128 LLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKA 187
+ Q+EFA RL A PG+ ++RL+VN ++ A V+ VM V + +F P P+V+S+VV I PK
Sbjct: 163 MFQREFAMRLFAKPGEKLYSRLSVNCQMWAKVDHVMKVGRNNFNPPPQVESNVVRISPKN 222
Query: 188 EIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
P ++ DEW R CF +KN+ L + F V+ +L
Sbjct: 223 PRPSISYDEWDGLLRVCFVRKNRVLRSGFLGTNSVMAML 261
>gi|449299993|gb|EMC96006.1| hypothetical protein BAUCODRAFT_34775 [Baudoinia compniacensis UAMH
10762]
Length = 382
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 98/219 (44%), Positives = 136/219 (62%), Gaps = 1/219 (0%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQHIL N V +IV K+ + D VLE+GPGTGNLT ++LE +K+V A+E D RM L
Sbjct: 40 GQHILKNPGVAQAIVDKADLKQSDIVLEVGPGTGNLTTRILEKAKRVIAVEQDPRMAAEL 99
Query: 69 NRRAADSGFHDRLNVISKDALKT-EFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATL 127
+R + RL +I D +K E P FD+ ++N PY ISSPL KL+ + S RS L
Sbjct: 100 TKRFQATPAAKRLELILGDVIKMPELPYFDVCISNTPYQISSPLTFKLLATSPSPRSCVL 159
Query: 128 LLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKA 187
+ Q+EFA RL A PGD ++RL+VN ++ A V+ VM V K +F P P+V+S+VV I PK
Sbjct: 160 MFQREFAMRLFAKPGDKLYSRLSVNAQMWAKVDHVMKVGKNNFNPPPQVESNVVRITPKT 219
Query: 188 EIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
P ++ DEW R F +KN+ L + F V+++L
Sbjct: 220 PRPQISYDEWDGLLRIAFVRKNRVLRSAFLGTSSVMDML 258
>gi|336366365|gb|EGN94712.1| hypothetical protein SERLA73DRAFT_187771 [Serpula lacrymans var.
lacrymans S7.3]
gi|336379035|gb|EGO20191.1| hypothetical protein SERLADRAFT_477564 [Serpula lacrymans var.
lacrymans S7.9]
Length = 321
Score = 186 bits (472), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 99/225 (44%), Positives = 142/225 (63%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
IF + GQHIL N V IV K+++ P D VLE+GPGTGNLT+++LE +K V A+E+D
Sbjct: 36 IFNTERFGQHILKNPLVAQGIVDKANLRPTDKVLEVGPGTGNLTVRILEKAKHVTAVEMD 95
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RM L +R +L++I D +K + P FD+ ++N PY ISSPLV +L+
Sbjct: 96 PRMAAELTKRVQGKPEQRKLDIIIGDFVKADLPYFDVCISNTPYQISSPLVFRLLSHRPL 155
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
R A L+ Q+EFA RL+A PG ++RL+ NV+L + V+ +M V K +F P PKV+SSVV
Sbjct: 156 CRVAILMFQREFALRLVARPGTELWSRLSANVQLYSKVDHIMKVGKNNFRPAPKVESSVV 215
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
I P P V +E+ R FS++NKT+ A+F K VI+++
Sbjct: 216 RIAPLDPPPPVKFEEFDGLNRIIFSRRNKTIHASF-MAKGVIDMM 259
>gi|217073100|gb|ACJ84909.1| unknown [Medicago truncatula]
Length = 225
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/175 (55%), Positives = 119/175 (68%), Gaps = 1/175 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I FHKSKGQHIL N ++D+IV+KS I D VLEIGPGTGNLT KLLE KKV A+EID
Sbjct: 24 ISFHKSKGQHILKNPLLVDTIVQKSGIKTTDVVLEIGPGTGNLTKKLLEAGKKVIAVEID 83
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV LN+R + RL VI D LKTE P FD+ VANIPY ISSPL KL+ +
Sbjct: 84 PRMVLELNKRFQGTP-SSRLTVIQGDVLKTELPYFDICVANIPYQISSPLTFKLLKHQPA 142
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKV 176
FR A ++ Q+EFA RL+A PGD + RL VN +L A + ++ V + +F P PK+
Sbjct: 143 FRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLHARISHLLKVGRNNFTPPPKL 197
>gi|358054954|dbj|GAA99021.1| hypothetical protein E5Q_05710 [Mixia osmundae IAM 14324]
Length = 511
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/218 (46%), Positives = 140/218 (64%), Gaps = 1/218 (0%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQHIL N V IV K+S+ D+VLE+GPGTGNLT+++L+V K A+E+D RM L
Sbjct: 233 GQHILKNPLVAQGIVDKASLRSTDSVLEVGPGTGNLTVRILQVCKHCLAVEMDPRMAAEL 292
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
+R +L+++ D +KTE P FD+ ++N PY ISSPLV KL+ FR A L+
Sbjct: 293 TKRVQGKPEQRKLDILVGDFVKTELPYFDVCISNTPYQISSPLVFKLLAQRPLFRVAILM 352
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q+EFA RL+A PGD +NRL+ NV+L A V+ +M V K +F P PKV+SSVV I P
Sbjct: 353 FQREFAMRLVAKPGDDLWNRLSANVQLFAKVDHIMKVGKNNFRPPPKVESSVVRIVPIDP 412
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
P + +E+ TR F+++NK + ATF Q V E+L
Sbjct: 413 PPPIRFEEFDGLTRIIFARRNKIVRATF-QASGVKEML 449
>gi|1806115|emb|CAA92586.1| dimethylase [Kluyveromyces lactis]
Length = 320
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 131/214 (61%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ GQHIL N V IV K+ I P D VLEIGPGTGNLT+++LE ++KV +
Sbjct: 31 FNTDLGQHILKNPLVAQGIVDKAQIKPSDIVLEIGPGTGNLTVRILEQARKVVRRGVRSS 90
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
+R + +L ++ D +KTE P FD+ ++N PY ISSPLV KL+ K R
Sbjct: 91 YGSGRTKRVHGTPVEKKLEILLGDFMKTELPYFDVCISNTPYQISSPLVFKLINQPKPPR 150
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+ L+ Q+EFA RLLA PGDS + RL+ NV++ A+V +M V K +F P PKV+SSVV I
Sbjct: 151 VSILMFQREFAMRLLARPGDSLYCRLSANVQMWANVTHIMKVGKNNFRPPPKVESSVVRI 210
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
K P V+ +EW R F +KN+T+ A FK
Sbjct: 211 EIKNPRPQVDFNEWDGLLRIVFVRKNRTIAAGFK 244
>gi|393219630|gb|EJD05117.1| rRNA adenine dimethylase [Fomitiporia mediterranea MF3/22]
Length = 320
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/225 (43%), Positives = 142/225 (63%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
IF + GQHIL N V +IV K+++ P D VLE+GPGTGNLT+++LE +K V A+E+D
Sbjct: 35 IFNTERFGQHILKNPLVAQAIVEKANLRPTDKVLEVGPGTGNLTVRILEKAKHVTAVEMD 94
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RM L +R +L ++ D +K + P FD+ ++N PY ISSPLV +L+
Sbjct: 95 PRMAAELTKRVQGKPEQRKLEIMIGDFVKADLPYFDVCISNTPYQISSPLVFRLLSHRPL 154
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
R A L+ Q+EFA RL+A PG + ++RL+ NV+L + V+ +M V K +F P P+V+SSVV
Sbjct: 155 CRVAILMFQREFALRLVARPGTALWSRLSANVQLYSKVDHIMKVGKNNFRPAPQVESSVV 214
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
I P P V +E+ R F ++NKT+ ATF + V+E+L
Sbjct: 215 RIVPLDPPPPVRFEEFDGLNRIIFGRRNKTVHATF-MARGVVEML 258
>gi|353243217|emb|CCA74785.1| probable rRNA (adenine-N6,N6-)-dimethyltransferase [Piriformospora
indica DSM 11827]
Length = 330
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/209 (44%), Positives = 136/209 (65%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQHIL N+ V +IV K+++ P D+VLE+GPGTGNLT+ +LE +K V A+E D RM L
Sbjct: 61 GQHILKNKAVAQAIVEKANLKPTDSVLEVGPGTGNLTVLILEKAKHVTAVEADPRMAAEL 120
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
+R + +L++ D +K E P FD+ ++N PY ISSPLV +L+ R A L+
Sbjct: 121 VKRVQGTPEQRKLDITVGDFVKAELPFFDVCISNTPYQISSPLVFRLLSHRPLPRVAILM 180
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q+EFA RL A+PG ++RL+ NV+L A V+ +M VS+ +F+P P V+SSVV I P +
Sbjct: 181 FQREFALRLTATPGTEFWSRLSANVQLYAKVDHIMKVSRNNFIPPPNVESSVVRITPLSP 240
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
P V +E+ TR F+++NKT A F+
Sbjct: 241 PPPVRFEEFDGLTRILFTRRNKTCRANFQ 269
>gi|331229364|ref|XP_003327348.1| dimethyladenosine transferase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309306338|gb|EFP82929.1| dimethyladenosine transferase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 341
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/229 (44%), Positives = 142/229 (62%), Gaps = 4/229 (1%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVS-KKVHAIEI 60
IF GQHIL N V +IV K+++ D VLE+GPGTGNLT+K+LE + K + +E+
Sbjct: 45 IFNTDKLGQHILKNPLVAQTIVDKANLKTTDKVLEVGPGTGNLTVKILEKNCKSLTVVEM 104
Query: 61 DERMVEILNRR---AADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVY 117
D RM L++R A D F +L +I D LKTE P FD+ ++N PY ISSPLV KL+
Sbjct: 105 DPRMAFELSKRFQNAKDLNFKRKLEIIVGDFLKTELPYFDVCISNTPYQISSPLVFKLLE 164
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
FR A L+ QKEF RL A PG ++RL+VNV+L + V +M+V K +F P P V+
Sbjct: 165 HRPLFRVAILMFQKEFGLRLSARPGSKLWSRLSVNVQLYSKVTHLMNVGKANFRPPPLVE 224
Query: 178 SSVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
S VV I P P++ +E+ TR CF+++NKT+ A+F + +L
Sbjct: 225 SCVVKIEPLNPPPNIAFNEFDGLTRICFNRRNKTVRASFFASNSTLNML 273
>gi|118388069|ref|XP_001027135.1| dimethyladenosine transferase family protein [Tetrahymena
thermophila]
gi|89308905|gb|EAS06893.1| dimethyladenosine transferase family protein [Tetrahymena
thermophila SB210]
Length = 345
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/211 (48%), Positives = 127/211 (60%), Gaps = 18/211 (8%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
+HIL N ++L SIV KS+I P D VLEIGPGTGNLT LLE +KKV A+EID RMV L
Sbjct: 14 NKHILVNPQMLHSIVEKSAIRPTDIVLEIGPGTGNLTALLLEKAKKVIAVEIDPRMVAEL 73
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
N+R S + +I DA+ TEFP FD+ VAN PY ISSPLV KL+ FR A L+
Sbjct: 74 NKRFKYSQHAHKFELIQGDAISTEFPFFDVCVANTPYQISSPLVFKLLSHRPLFRHAVLM 133
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q L+VNV+L++ + ++ V K +F P PKV+SSV+ I PK
Sbjct: 134 FQ------------------LSVNVQLLSKCDHLIKVGKNNFKPPPKVESSVIRIEPKNP 175
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFKQK 219
P +N EW R CF +KNK L A FK K
Sbjct: 176 APVLNYIEWDGLLRVCFMRKNKQLSAIFKNK 206
>gi|443923423|gb|ELU42667.1| rRNA (adenine-N6,N6-)-dimethyltransferase [Rhizoctonia solani AG-1
IA]
Length = 498
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 97/223 (43%), Positives = 140/223 (62%), Gaps = 6/223 (2%)
Query: 9 GQHILTNQRVLDSI-----VRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
GQHIL N V I + ++++ P D VLE+GPGTGNLT+++LE +K A+E+D R
Sbjct: 45 GQHILKNPLVAQGIYLYLHMTQANLKPTDRVLEVGPGTGNLTVRILERAKHCTAVEMDPR 104
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R + +LN++ D +K E P FD+ ++N PY ISSP+V +L+ FR
Sbjct: 105 MAAELTKRVQGTPEQHKLNIMIGDFVKAELPYFDVCISNTPYQISSPIVFRLLSHRPLFR 164
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A L+ Q+EFA RL+A PGD+ + RL+ NV++ A V+ +M V K +F P P+V+SSVV I
Sbjct: 165 VAILMFQREFALRLVARPGDALWCRLSANVQMYAKVDHIMKVGKNNFRPAPQVESSVVRI 224
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
P P + +E+ TR FS++NKT A F K V+ELL
Sbjct: 225 VPIDPPPPLRFEEFDGLTRILFSRRNKTAHANF-LAKGVMELL 266
>gi|408395728|gb|EKJ74904.1| hypothetical protein FPSE_04940 [Fusarium pseudograminearum CS3096]
Length = 346
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 96/225 (42%), Positives = 137/225 (60%), Gaps = 4/225 (1%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ + GQHIL N + D+IV K+ + P DTVLEIGPGTG LT ++LE +K V A+E+D R
Sbjct: 28 FNTNIGQHILKNPGIADTIVAKAYLKPTDTVLEIGPGTGVLTTRILEQAKAVKAVELDTR 87
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTE----FPQFDLVVANIPYGISSPLVAKLVYGT 119
M L +R +L +I D K + P D+ ++N PY ISS +V+KL+
Sbjct: 88 MAAELTKRVQGGPLQQKLEIIMGDFAKLDIVQALPPIDVCISNTPYQISSIIVSKLISMP 147
Query: 120 KSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSS 179
K R + L++Q+EF RL A GDS ++RL+VN + + V V V K +F P P+V+S
Sbjct: 148 KPPRVSILMVQREFGLRLCARAGDSLYSRLSVNTQFTSKVSMVAKVGKNNFSPPPEVESV 207
Query: 180 VVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIE 224
VV I P+ ++P V L+E R CFS+KNKTL A+F ++ E
Sbjct: 208 VVRIEPRTDVPAVGLEELDGVLRICFSRKNKTLRASFLDSHEICE 252
>gi|46121341|ref|XP_385225.1| hypothetical protein FG05049.1 [Gibberella zeae PH-1]
Length = 346
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 96/225 (42%), Positives = 137/225 (60%), Gaps = 4/225 (1%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ + GQHIL N + D+IV K+ + P DTVLEIGPGTG LT ++LE +K V A+E+D R
Sbjct: 28 FNTNIGQHILKNPGIADTIVAKAYLKPTDTVLEIGPGTGVLTTRILEQAKAVKAVELDTR 87
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTE----FPQFDLVVANIPYGISSPLVAKLVYGT 119
M L +R +L +I D K + P D+ ++N PY ISS +V+KL+
Sbjct: 88 MAAELTKRVQGGPLQQKLEIIMGDFAKLDVVQALPPIDVCISNTPYQISSIIVSKLISMP 147
Query: 120 KSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSS 179
K R + L++Q+EF RL A GDS ++RL+VN + + V V V K +F P P+V+S
Sbjct: 148 KPPRVSILMVQREFGLRLCARAGDSLYSRLSVNTQFTSKVSMVAKVGKNNFSPPPEVESV 207
Query: 180 VVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIE 224
VV I P+ ++P V L+E R CFS+KNKTL A+F ++ E
Sbjct: 208 VVRIEPRTDVPAVGLEELDGVLRICFSRKNKTLRASFLDSHEICE 252
>gi|336268929|ref|XP_003349226.1| hypothetical protein SMAC_05510 [Sordaria macrospora k-hell]
gi|380089800|emb|CCC12332.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 401
Score = 182 bits (463), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 98/220 (44%), Positives = 140/220 (63%), Gaps = 3/220 (1%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K GQHIL N + D+IV K+ + P D V+EIGPGTGN+T++ LE +KKV AI+ID R
Sbjct: 39 FDKDYGQHILKNPGISDAIVDKAFLKPTDVVVEIGPGTGNITVRALEKAKKVIAIDIDPR 98
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKT-EFPQFDLVVANIPYGISSPLVAKLVYGTKSF 122
M + +R + +L VI D +K E P D +++N PY ISSPL+ K++
Sbjct: 99 MGAEVTKRVQGTPLAKKLEVILGDVIKMPEMPPCDALISNTPYQISSPLIFKMLAMPNPP 158
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
R A L+ Q+EFA+RL+A PGD+ ++RL+VNV A + +M V K++F P PKV+S VV
Sbjct: 159 RVAVLMFQREFAKRLVARPGDALYSRLSVNVNFWATCKHIMKVGKQNFKPPPKVESDVVR 218
Query: 183 IRP--KAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKK 220
I P + P++ +E+ R F++KNKTL A F QK+
Sbjct: 219 IEPLIGSARPNIAFEEFDGLLRIAFNRKNKTLYAGFNQKE 258
>gi|169765912|ref|XP_001817427.1| dimethyladenosine transferase [Aspergillus oryzae RIB40]
gi|238482523|ref|XP_002372500.1| dimethyladenosine transferase [Aspergillus flavus NRRL3357]
gi|83765282|dbj|BAE55425.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220700550|gb|EED56888.1| dimethyladenosine transferase [Aspergillus flavus NRRL3357]
gi|391868353|gb|EIT77571.1| ribosomal RNA adenine dimethylase [Aspergillus oryzae 3.042]
Length = 392
Score = 182 bits (463), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 93/220 (42%), Positives = 138/220 (62%), Gaps = 3/220 (1%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ GQHIL N + D+IV K++I TVLE+GPG G LT ++L +KKV A+E+D R
Sbjct: 35 FNTDLGQHILKNGAIADAIVDKANIQQGQTVLEVGPGPGVLTNRILAKAKKVVAVEVDPR 94
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKT---EFPQFDLVVANIPYGISSPLVAKLVYGTK 120
M L + + +L ++ D +KT + P F + ++N PY ISSPL+ KL+
Sbjct: 95 MAAELTKNVQGTPAEKKLQIVLGDFVKTDLSQLPPFQICISNTPYQISSPLIFKLLSMPN 154
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
+ L++Q+EFA RL+A PGDS ++RL+VNV+ + V+ +M V + +F P P+V+SSV
Sbjct: 155 PPKMCVLMVQREFALRLVARPGDSLYSRLSVNVQFFSRVQHIMKVGRNNFRPPPQVESSV 214
Query: 181 VIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKK 220
V + PK++ P ++ DEW R CF +KNKTL A F K
Sbjct: 215 VRVEPKSDRPAISWDEWDGMLRICFVRKNKTLRAGFMGNK 254
>gi|123455450|ref|XP_001315469.1| dimethyladenosine transferase family protein [Trichomonas vaginalis
G3]
gi|121898147|gb|EAY03246.1| dimethyladenosine transferase family protein [Trichomonas vaginalis
G3]
Length = 295
Score = 182 bits (463), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 146/227 (64%), Gaps = 6/227 (2%)
Query: 7 SKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSK-KVHAIEIDERMV 65
S GQ+IL ++ V+ +IV P D +LEIGPG GN+T ++L +V AIE D+RM
Sbjct: 20 SLGQNILRSKVVVKNIVDAGEPRPGDKILEIGPGNGNMTEEMLSREGIEVIAIEKDQRMC 79
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSA 125
L ++ H L +I+ D L + P+FDL ++NIPY ISS +V KL+ +FR
Sbjct: 80 VELKKKFPR---HPNLRIINADVLSVDLPEFDLCISNIPYNISSAIVFKLL-ARPTFRRT 135
Query: 126 TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP 185
L++QKEF R++A PG + RLA+N +L A V+ VM+VS+++F+P PKVDS VV I+P
Sbjct: 136 VLMVQKEFGERIVARPGKDGWGRLAINTQLYASVKLVMNVSRKNFVPPPKVDSIVVSIQP 195
Query: 186 KAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLSKQK 232
+ PD++ +EW + CF++ N+TL ATF KKK+ LL +++K
Sbjct: 196 REVQPDIDFNEWDGLIKLCFTRPNRTLQATF-HKKKIRALLNENREK 241
>gi|85099447|ref|XP_960790.1| dimethyladenosine transferase [Neurospora crassa OR74A]
gi|28922314|gb|EAA31554.1| dimethyladenosine transferase [Neurospora crassa OR74A]
Length = 398
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/220 (44%), Positives = 140/220 (63%), Gaps = 3/220 (1%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K GQHIL N + D+IV K+ + P D V+E+GPGTGN+T++ LE +KKV AIE+D R
Sbjct: 37 FDKDFGQHILKNPGISDAIVDKAFLKPTDVVVEVGPGTGNITVRALEKAKKVIAIELDPR 96
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKT-EFPQFDLVVANIPYGISSPLVAKLVYGTKSF 122
M + +R + +L VI D +K E P D +++N PY ISSPL+ K++
Sbjct: 97 MGAEVTKRVQGTPLAKKLEVILGDVIKMPEMPPCDALISNTPYQISSPLIFKMLAMPNPP 156
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
R A L+ Q+EFA+RL+A PGD+ ++RL+VNV A + +M V K++F P PKV+S VV
Sbjct: 157 RVAVLMFQREFAKRLVARPGDALYSRLSVNVNFWATCKHIMKVGKQNFKPPPKVESDVVR 216
Query: 183 IRP--KAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKK 220
I P + P++ +E+ R F++KNKTL A F QK+
Sbjct: 217 IEPLVGSARPNIAFEEFDGLLRIAFNRKNKTLYAGFNQKE 256
>gi|336472024|gb|EGO60184.1| dimethyladenosine transferase, partial [Neurospora tetrasperma FGSC
2508]
gi|350294774|gb|EGZ75859.1| dimethyladenosine transferase, partial [Neurospora tetrasperma FGSC
2509]
Length = 397
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/220 (44%), Positives = 140/220 (63%), Gaps = 3/220 (1%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K GQHIL N + D+IV K+ + P D V+E+GPGTGN+T++ LE +KKV AIE+D R
Sbjct: 36 FDKDFGQHILKNPGISDAIVDKAFLKPTDVVVEVGPGTGNITVRALEKAKKVIAIELDPR 95
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKT-EFPQFDLVVANIPYGISSPLVAKLVYGTKSF 122
M + +R + +L VI D +K E P D +++N PY ISSPL+ K++
Sbjct: 96 MGAEVTKRVQGTPLAKKLEVILGDVIKMPEMPPCDALISNTPYQISSPLIFKMLAMPNPP 155
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
R A L+ Q+EFA+RL+A PGD+ ++RL+VNV A + +M V K++F P PKV+S VV
Sbjct: 156 RVAVLMFQREFAKRLVARPGDALYSRLSVNVNFWATCKHIMKVGKQNFKPPPKVESDVVR 215
Query: 183 IRP--KAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKK 220
I P + P++ +E+ R F++KNKTL A F QK+
Sbjct: 216 IEPLVGSARPNIAFEEFDGLLRIAFNRKNKTLYAGFNQKE 255
>gi|402584543|gb|EJW78484.1| hypothetical protein WUBG_10607, partial [Wuchereria bancrofti]
Length = 198
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 126/192 (65%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ +GQHIL N ++++IV KS+I DTV E+G GTGNLT+ LL +KKV A EID+R
Sbjct: 3 FNTDRGQHILKNPGIINAIVEKSAIKATDTVFEVGSGTGNLTVALLGKAKKVIACEIDQR 62
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M+ L +R + +L V D +KTE+P FD+ VAN+PY ISSP V KL+ R
Sbjct: 63 MIAELKKRVIGTSSQQKLEVRQGDVIKTEWPFFDVCVANLPYQISSPFVFKLLLQRPLPR 122
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A L+ QKEFA RLLA PG+ + RL+VNV+ +A VE +M V + +F P PKVDS+VV I
Sbjct: 123 YAVLMFQKEFADRLLAKPGNKLYCRLSVNVQFLAQVEHLMKVKRTEFRPPPKVDSAVVRI 182
Query: 184 RPKAEIPDVNLD 195
P+ P +N
Sbjct: 183 APRNPPPKINFQ 194
>gi|430814011|emb|CCJ28696.1| unnamed protein product [Pneumocystis jirovecii]
Length = 304
Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 137/214 (64%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
+K GQHIL N V I+ K+ + P D VLE+G GTGNLT+K+L+ +KKV A+E+D R
Sbjct: 22 LNKDIGQHILKNPLVAQGIIDKADLKPSDIVLEVGSGTGNLTVKILQKAKKVIAVEMDPR 81
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M L +R + RL ++ D +K + P FD+ ++N PY ISSPLV KL+ + R
Sbjct: 82 MSMELVKRVQATPDEKRLEILLGDVIKIDLPYFDVCISNTPYQISSPLVFKLLKQSPPPR 141
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A L+ Q+EFA RL+A PG+ + RL+VNV++ A V VM V K +F P P+V+SSVV I
Sbjct: 142 LAILMFQREFAMRLVAKPGEPLYCRLSVNVQMWAKVTHVMKVGKNNFKPPPQVESSVVKI 201
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
PK P ++ +EW R CF +KNKT+ + FK
Sbjct: 202 EPKIPPPPISFEEWDGLLRICFVRKNKTILSGFK 235
>gi|328785046|ref|XP_624425.2| PREDICTED: probable dimethyladenosine transferase-like [Apis
mellifera]
Length = 280
Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 94/217 (43%), Positives = 124/217 (57%), Gaps = 26/217 (11%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+ GQHIL N V+ S+V K+++ P D VLEIGP
Sbjct: 21 ILFNTDIGQHILKNPLVIQSMVEKAAVRPTDVVLEIGPAE-------------------- 60
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
L +R + + +L ++ D LKT+ P FDL VANIPY ISSPLV KL+
Sbjct: 61 ------LQKRVQGTAYQSKLQIMIGDVLKTDLPFFDLCVANIPYQISSPLVFKLLLHRPM 114
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+S+VV
Sbjct: 115 FRCAILMFQREFAERLVAKPGDKLYCRLSINTQLLARVDLLMKVGKNNFRPPPKVESNVV 174
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
I P+ P +N EW TR F +KNKTL A FKQ
Sbjct: 175 RIEPRNPPPPINYQEWDGLTRIAFVRKNKTLSAAFKQ 211
>gi|409042841|gb|EKM52324.1| hypothetical protein PHACADRAFT_211596 [Phanerochaete carnosa
HHB-10118-sp]
Length = 320
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 98/225 (43%), Positives = 141/225 (62%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
IF + GQHIL N + D+IV K+++ P D VLE+GPGTGNLT+++LE +K V A+E+D
Sbjct: 35 IFNTERFGQHILKNPQTADTIVEKANLRPTDKVLEVGPGTGNLTVRILEKAKHVTAVEMD 94
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RM L +R +L ++ D +K P FD+ ++N PY ISSPL+ +L+
Sbjct: 95 PRMAAELTKRVQGKPEQKKLEIMIGDFVKATLPYFDVCISNTPYQISSPLIFRLLSHRPL 154
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PG ++RL+ NV+L + V+ VM V K +F P PKV+SSV+
Sbjct: 155 FRIAILMFQREFAMRLVARPGTEPWSRLSANVQLYSKVDLVMHVGKNNFRPPPKVESSVI 214
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
+ P P V +E+ R FS++NK + A F K VIE+L
Sbjct: 215 RLVPLDPPPPVAFEEFDGLGRIIFSRRNKIIHANF-MAKGVIEML 258
>gi|367039157|ref|XP_003649959.1| hypothetical protein THITE_2109142 [Thielavia terrestris NRRL 8126]
gi|346997220|gb|AEO63623.1| hypothetical protein THITE_2109142 [Thielavia terrestris NRRL 8126]
Length = 407
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 98/220 (44%), Positives = 138/220 (62%), Gaps = 3/220 (1%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K GQHIL N + D+IV K+ + P D V+E+GPGTGN+T++ LE KKV AIE+D R
Sbjct: 37 FDKDIGQHILKNPGISDAIVEKAFLKPTDVVVEVGPGTGNITVRALEKVKKVIAIELDPR 96
Query: 64 MVEILNRRAADSGFHDRLNVISKDALK-TEFPQFDLVVANIPYGISSPLVAKLVYGTKSF 122
M + +R + +L VI D +K E P D +++N PY ISSPLV K++
Sbjct: 97 MGAEVTKRVQGTPLAKKLEVILGDVIKLPELPPCDALISNTPYQISSPLVFKMLSMPNPP 156
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
R A L+ Q+EFA+RL+A PGD+ ++RL+VNV A + +M V K++F P PKV+S VV
Sbjct: 157 RVAVLMFQREFAKRLVARPGDALYSRLSVNVNFWATCKHIMKVGKQNFKPPPKVESDVVR 216
Query: 183 IRP--KAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKK 220
I P + P+V +E+ R F++KNKTL A F K+
Sbjct: 217 IEPLLGSARPNVAFEEFDGLLRIAFNRKNKTLRAAFAIKE 256
>gi|170097177|ref|XP_001879808.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645211|gb|EDR09459.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 290
Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 95/230 (41%), Positives = 145/230 (63%), Gaps = 1/230 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
IF + GQHIL N IV +++ P D V+E+GPGTGNLT+K+LE +K V A+E+D
Sbjct: 5 IFNTQRFGQHILKNPATAQKIVDAANLKPTDKVMEVGPGTGNLTVKILEKAKHVTAVEMD 64
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RM + +R + +L VI D +K + P F++ ++N PY ISSPLV +L+
Sbjct: 65 PRMAAEVIKRVQGTPEQRKLEVIIGDFVKVDMPYFEVCISNTPYQISSPLVFRLLSHRPL 124
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PG + ++RL+ NV+L A V+ +++VS+ DF P P+V+SSV+
Sbjct: 125 FRVAILMFQREFAMRLVARPGTALWSRLSANVQLYAKVDNIINVSRNDFRPPPQVESSVI 184
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLSKQ 231
+ P P V +E+ R FS+ NKT+ F Q K V+++L +++
Sbjct: 185 RLVPIDPPPPVKFEEFDGLNRIIFSRPNKTVRGNF-QAKGVMKMLEQNRR 233
>gi|440793386|gb|ELR14572.1| dimethyladenosine transferase [Acanthamoeba castellanii str. Neff]
Length = 294
Score = 179 bits (455), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 103/224 (45%), Positives = 141/224 (62%), Gaps = 15/224 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
+KS GQH+L N ++++ IV K+ + D VLEIGPGTGNLT+K+L + KKV A+E+D R
Sbjct: 25 MNKSFGQHLLKNPQIIEGIVTKAKLKSTDVVLEIGPGTGNLTMKMLPLVKKVIAVELDPR 84
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
MV L +R + +L +I D +K P FD+ VAN+PY ISSPLV KL+ R
Sbjct: 85 MVAELQKRVQGTAHGHKLELILCDFMKVNLPYFDVCVANVPYQISSPLVFKLLSHRPVPR 144
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A L+ Q+EFA RL+A PGD + RL+ +SK +F P PKV+SSVV I
Sbjct: 145 CAVLMFQREFAMRLVAPPGDPLYCRLS--------------ISKHNFRPPPKVESSVVRI 190
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLR 227
+PK P +N +EW R CF++KNK+L A F+ K VI+LL+
Sbjct: 191 KPKNPPPPINFEEWDGLVRLCFTRKNKSLSAIFR-AKSVIDLLQ 233
>gi|393911742|gb|EJD76436.1| dimethyladenosine transferase, variant [Loa loa]
Length = 302
Score = 179 bits (454), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 124/192 (64%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ +GQHIL N V+++IV KS+I DTV E+G GTGNLT+ L+E +KKV A EID R
Sbjct: 23 FNTGRGQHILKNPGVVNAIVEKSAIKATDTVFEVGSGTGNLTVVLMEKAKKVIACEIDRR 82
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M+ L +R + +L + D +K E+P FD+ +AN+PY ISSP V +++ R
Sbjct: 83 MIAELKKRVIGTSHQQKLEMKQGDVIKMEWPFFDVCIANLPYQISSPFVFRMLLQRPLPR 142
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A L+ QKEFA RLLA PG + RL+VNV+ +A VE +M V + +F P PKVDS+VV I
Sbjct: 143 YAVLMFQKEFADRLLAKPGSKLYCRLSVNVQFLAQVEHLMKVKRTEFRPPPKVDSAVVRI 202
Query: 184 RPKAEIPDVNLD 195
P+ P +N
Sbjct: 203 APRNPPPQINFQ 214
>gi|327262970|ref|XP_003216295.1| PREDICTED: probable dimethyladenosine transferase-like [Anolis
carolinensis]
Length = 328
Score = 179 bits (454), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 90/194 (46%), Positives = 124/194 (63%)
Query: 23 VRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLN 82
++ +S+ P D VLE+GPGTGN+T+K+LE K+V A E+D ++ L +R + ++L
Sbjct: 64 MKHASLYPTDVVLEVGPGTGNMTVKMLEKVKRVVACEVDVKLAGELQKRVQGTPLANKLE 123
Query: 83 VISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPG 142
+ D LK++ P FD VAN+PY ISSP V KL+ FR A L+ Q+EFA RL+A PG
Sbjct: 124 IKIGDVLKSDLPFFDACVANLPYQISSPFVFKLLLHRPFFRCAVLMFQREFALRLVAKPG 183
Query: 143 DSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAEIPDVNLDEWRAFTR 202
+ RL+VN +L+A V+ +M V K +F P PKV+SSVV I PK P +N EW R
Sbjct: 184 SPLYCRLSVNTQLLARVDHLMKVGKNNFKPPPKVESSVVRIEPKNPPPPINFQEWDGLLR 243
Query: 203 TCFSKKNKTLGATF 216
F +KNKTL A F
Sbjct: 244 IVFVRKNKTLAAVF 257
>gi|395326811|gb|EJF59216.1| rRNA adenine dimethylase [Dichomitus squalens LYAD-421 SS1]
Length = 320
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/225 (45%), Positives = 142/225 (63%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
IF + GQHIL N + SIV +S+ P D VLE+GPGTGNLT+++LE +K V A+E+D
Sbjct: 35 IFNTERFGQHILKNPQTAQSIVDLASLRPTDKVLEVGPGTGNLTVRILEKAKHVSAVEMD 94
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RM L +R +L +I D +K P FD+ ++N PY ISSPLV +L+
Sbjct: 95 PRMAAELTKRVQGKPEQRKLEIIIGDFVKATLPYFDVCISNTPYQISSPLVFRLLSHRPL 154
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PG + ++RL+ NV+L A V+ VM+VSK +F P PKV+SSVV
Sbjct: 155 FRVAILMFQREFATRLVAQPGTALWSRLSANVQLYAKVDLVMNVSKNNFRPPPKVESSVV 214
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
+ P+ P V E+ R F ++NKT+ A F K V+E+L
Sbjct: 215 RVVPRDPPPPVEFGEFDGLGRIIFGRRNKTVHANF-MAKGVMEML 258
>gi|302682452|ref|XP_003030907.1| hypothetical protein SCHCODRAFT_56433 [Schizophyllum commune H4-8]
gi|300104599|gb|EFI96004.1| hypothetical protein SCHCODRAFT_56433 [Schizophyllum commune H4-8]
Length = 329
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/225 (43%), Positives = 139/225 (61%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
IF + GQHIL N V IV K+++ P D VLE+GPGTGNLT+++L+ +K V A+E+D
Sbjct: 36 IFKTERFGQHILNNPLVAQGIVDKANLKPTDNVLEVGPGTGNLTVRILDKAKHVTAVEMD 95
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RM L +R +L++I D +K + P FD+ ++N PY ISSPLV +L+
Sbjct: 96 PRMAAELTKRVQGKPEQRKLDIIIGDFVKADLPYFDVCISNTPYQISSPLVFRLLSHRPL 155
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
R L+ Q+EFA RL+A PG ++RL+ NV+L A V+ VM V+K F P P V+SSVV
Sbjct: 156 PRVCILMFQREFALRLVARPGTEFWSRLSANVQLYAKVDHVMKVAKSCFRPPPMVESSVV 215
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
I P P V +E+ TR F++ NK + A F Q + V+E+L
Sbjct: 216 RIVPLDPPPPVRFEEFDGLTRIIFARPNKVVHANF-QARGVLEML 259
>gi|269860446|ref|XP_002649944.1| dimethyladenosine transferase [Enterocytozoon bieneusi H348]
gi|220066631|gb|EED44106.1| dimethyladenosine transferase [Enterocytozoon bieneusi H348]
Length = 275
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/222 (43%), Positives = 141/222 (63%), Gaps = 5/222 (2%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS+ QH+L N ++D I+ K+ I D VLEIG GTGN+T+KLL +KKV A E D+++
Sbjct: 7 KSESQHMLVNNNLIDVIIDKAKIKHTDIVLEIGAGTGNITMKLLPKAKKVIAYEKDKKLA 66
Query: 66 -EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRS 124
EI N+ +L++I D L+ P FD ++NIP+ IS P++ KL+ F++
Sbjct: 67 NEIQNKLYTQKLLKAKLHLIQDDVLENNLPHFDKCISNIPFNISLPIILKLM--NSHFKN 124
Query: 125 ATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIR 184
A +L+QKEFA RL + PG +++RL+V V+L A VE V+ V K +F+P PKVD+ + I
Sbjct: 125 AFILVQKEFADRLTSRPGSKDYSRLSVIVQLFAKVECVLKVKKNNFIPQPKVDTCFIKIE 184
Query: 185 PKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK--QKKKVIE 224
PK P ++L E+ + CFS+KNKTL + K Q KK IE
Sbjct: 185 PKVPRPSLDLTEFDNLLKICFSRKNKTLMSNLKTPQMKKYIE 226
>gi|380021910|ref|XP_003694799.1| PREDICTED: probable dimethyladenosine transferase-like [Apis
florea]
Length = 280
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/217 (43%), Positives = 124/217 (57%), Gaps = 26/217 (11%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+ GQHIL N V+ S+V K+++ P D VLEIGP
Sbjct: 21 ILFNTDIGQHILKNPLVIQSMVEKAAVRPTDVVLEIGPAE-------------------- 60
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
L +R + + +L ++ D LKT+ P FDL VANIPY ISSPLV KL+
Sbjct: 61 ------LQKRVQGTVYQSKLQIMIGDILKTDLPFFDLCVANIPYQISSPLVFKLLLHRPM 114
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+S+VV
Sbjct: 115 FRCAILMFQREFAERLVAKPGDKLYCRLSINTQLLARVDLLMKVGKNNFRPPPKVESNVV 174
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
I P+ P +N EW TR F +KNKTL A FKQ
Sbjct: 175 RIEPRNPPPPINYQEWDGLTRIAFVRKNKTLSAAFKQ 211
>gi|312085450|ref|XP_003144684.1| hypothetical protein LOAG_09107 [Loa loa]
Length = 276
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/202 (45%), Positives = 126/202 (62%)
Query: 19 LDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFH 78
L S + +S+I DTV E+G GTGNLT+ L+E +KKV A EID RM+ L +R +
Sbjct: 8 LTSALLQSAIKATDTVFEVGSGTGNLTVVLMEKAKKVIACEIDRRMIAELKKRVIGTSHQ 67
Query: 79 DRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLLQKEFARRLL 138
+L + D +K E+P FD+ +AN+PY ISSP V +++ R A L+ QKEFA RLL
Sbjct: 68 QKLEMKQGDVIKMEWPFFDVCIANLPYQISSPFVFRMLLQRPLPRYAVLMFQKEFADRLL 127
Query: 139 ASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAEIPDVNLDEWR 198
A PG + RL+VNV+ +A VE +M V + +F P PKVDS+VV I P+ P +N EW
Sbjct: 128 AKPGSKLYCRLSVNVQFLAQVEHLMKVKRTEFRPPPKVDSAVVRIAPRNPPPQINFQEWD 187
Query: 199 AFTRTCFSKKNKTLGATFKQKK 220
R F +KNKTL + FK +
Sbjct: 188 NLLRIVFLRKNKTLLSLFKNNQ 209
>gi|340915013|gb|EGS18354.1| dimethyladenosine transferase-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 377
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/220 (43%), Positives = 137/220 (62%), Gaps = 3/220 (1%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K GQHIL N + D+IV K+ + P D V+E+GPGTGN+T++ LE +KKV AIE+D R
Sbjct: 32 FDKDYGQHILKNPGISDAIVEKAFLKPTDVVVEVGPGTGNITVRALERAKKVIAIELDPR 91
Query: 64 MVEILNRRAADSGFHDRLNVISKDALK-TEFPQFDLVVANIPYGISSPLVAKLVYGTKSF 122
M + +R + +L VI D +K + P D +++N PY ISSPL+ K++ +
Sbjct: 92 MGAEVTKRVQGTPLAKKLEVILGDVIKLPQIPPCDALISNTPYQISSPLIFKMLSMPQPP 151
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
R A L+ Q+EFA+RL+A PGDS ++RL VNV A +M V K +F P PKV+S VV
Sbjct: 152 RVAVLMFQREFAKRLVAKPGDSLYSRLTVNVNFWATCTHIMKVGKANFKPPPKVESDVVR 211
Query: 183 IRP--KAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKK 220
I P + P++ +E+ R F++KNKTL A F K+
Sbjct: 212 IEPYLGSARPNIAFEEFDGLLRIAFNRKNKTLRAAFSIKE 251
>gi|367026113|ref|XP_003662341.1| hypothetical protein MYCTH_2302881 [Myceliophthora thermophila ATCC
42464]
gi|347009609|gb|AEO57096.1| hypothetical protein MYCTH_2302881 [Myceliophthora thermophila ATCC
42464]
Length = 400
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/220 (43%), Positives = 137/220 (62%), Gaps = 3/220 (1%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K GQHIL N + D+IV K+ + P D V+E+GPGTGN+T++ LE +KKV AIE+D R
Sbjct: 32 FDKDYGQHILKNPGISDAIVEKAFLKPTDVVVEVGPGTGNITVRALEKAKKVIAIELDPR 91
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKT-EFPQFDLVVANIPYGISSPLVAKLVYGTKSF 122
M + +R +L VI D +K + P D +++N PY ISSPL+ K++
Sbjct: 92 MGAEVTKRVQGGPLAKKLEVILGDVIKMPQIPPCDALISNTPYQISSPLIFKMLSMPNPP 151
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
R A L+ Q+EFA+RL+A PGD+ ++RL+VNV A + +M V K +F P PKV+S VV
Sbjct: 152 RVAVLMFQREFAKRLVARPGDALYSRLSVNVNFWATCKHIMKVGKANFKPPPKVESDVVR 211
Query: 183 IRP--KAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKK 220
I P + P++ +E+ R F++KNKTL A F K+
Sbjct: 212 IEPLLGSARPNIAFEEFDGLLRIAFNRKNKTLRAAFSIKE 251
>gi|402220127|gb|EJU00199.1| rRNA adenine dimethylase [Dacryopinax sp. DJM-731 SS1]
Length = 318
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/218 (45%), Positives = 143/218 (65%), Gaps = 1/218 (0%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQHIL N V IV K+++ P D VLE+GPGTGNLT+ +LE +K+V AIE+D RM L
Sbjct: 40 GQHILKNPGVARDIVDKANLRPTDRVLEVGPGTGNLTVLILEKAKQVTAIEMDPRMAAEL 99
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
++R + +LN++ D +K + P FD+ ++N PY ISSP++ +L+ FR A L+
Sbjct: 100 SKRVQGTPEQRKLNIMIGDFVKADLPYFDVCISNTPYQISSPIIFRLLSHRPLFRVAILM 159
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q+EFA RL+A PG S ++RL+ NV+L A V+ + V K +F P P+VDSSVV + PK
Sbjct: 160 FQREFAMRLVAQPGSSLWSRLSANVQLYAAVDHIRKVDKANFRPAPEVDSSVVRVVPKDP 219
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
P V +E+ TR F+++NKT+ A F Q K V ++L
Sbjct: 220 PPPVKFEEFDGLTRILFTRRNKTVHANF-QAKGVYKML 256
>gi|302421778|ref|XP_003008719.1| dimethyladenosine transferase [Verticillium albo-atrum VaMs.102]
gi|261351865|gb|EEY14293.1| dimethyladenosine transferase [Verticillium albo-atrum VaMs.102]
Length = 346
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 130/204 (63%), Gaps = 2/204 (0%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ + GQHIL N V D+IV K+ + P DTVLEIGPGTGNLT+++LE +KK+ AIE D R
Sbjct: 31 FNTNVGQHILKNPGVADAIVAKAGLKPTDTVLEIGPGTGNLTVRILENAKKLIAIEFDPR 90
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M + +R + +L V+ DA+K ++ FD++++N PY ISSPLV K++ K R
Sbjct: 91 MAAEVTKRVQGTPEQRKLEVMLGDAIKVDWVPFDVLISNTPYQISSPLVFKMLAMPKPPR 150
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A L+ Q EF +RL+A PGD + RL+VN A VM VSK +F P P+VDS VV I
Sbjct: 151 QAILMFQLEFGQRLVAKPGDKLYGRLSVNANFWATCSNVMKVSKANFRPPPQVDSCVVRI 210
Query: 184 RPK--AEIPDVNLDEWRAFTRTCF 205
PK +E P++ +E+ R +
Sbjct: 211 VPKQGSERPNIAFEEFDGLLRINY 234
>gi|261194984|ref|XP_002623896.1| dimethyladenosine transferase [Ajellomyces dermatitidis SLH14081]
gi|239587768|gb|EEQ70411.1| dimethyladenosine transferase [Ajellomyces dermatitidis SLH14081]
Length = 330
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/194 (45%), Positives = 124/194 (63%)
Query: 33 TVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE 92
TVLEIGPGTGNLT+K+LE +KKV A+E+D RM + +R RL V+ D +KT+
Sbjct: 10 TVLEIGPGTGNLTVKILEKAKKVIAVELDPRMAAEVTKRVQGKPEQKRLEVLLGDVIKTD 69
Query: 93 FPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVN 152
P FD+ ++N PY ISSPL KL+ + R L+ Q+EFA RL A PGD ++RL+VN
Sbjct: 70 LPYFDVCISNTPYQISSPLTFKLLAINPAPRVCILMFQREFAMRLFAKPGDKLYSRLSVN 129
Query: 153 VKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTL 212
++ A ++ +M V K +F P P V+SSVV I PK P ++ DEW R F +KNKT+
Sbjct: 130 AQMWARIDHIMKVGKNNFKPPPAVESSVVRIVPKNPRPQISYDEWDGLLRVAFVRKNKTM 189
Query: 213 GATFKQKKKVIELL 226
++F V+++L
Sbjct: 190 RSSFLGTTSVLDML 203
>gi|299740974|ref|XP_001834135.2| rRNA (adenine-N6,N6-)-dimethyltransferase [Coprinopsis cinerea
okayama7#130]
gi|298404496|gb|EAU87730.2| rRNA (adenine-N6,N6-)-dimethyltransferase [Coprinopsis cinerea
okayama7#130]
Length = 318
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/218 (44%), Positives = 139/218 (63%), Gaps = 1/218 (0%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQHIL N + IV +++ P D VLE+GPGTGNLT+K+LE +K V A+E+D RM +
Sbjct: 39 GQHILKNTQTAQKIVDAANLKPTDKVLEVGPGTGNLTVKILEKAKHVTAVEMDPRMAAEV 98
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
+R + +L VI D +K E P F++ ++N PY ISSPLV +L+ FR A L+
Sbjct: 99 LKRVQGTPEQRKLEVIIGDFVKAEIPYFEVCISNTPYQISSPLVFRLLSHRPLFRVAILM 158
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q+EFA RL+A PG S ++RL+ NV+L A V+ +M V++ DF P P+V+SSV+ + P
Sbjct: 159 FQREFALRLVARPGTSLWSRLSANVQLYAKVDNIMHVNRNDFRPPPQVESSVIRLVPLDP 218
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
P V +E+ R FS+ NKT+ F Q K V+++L
Sbjct: 219 PPPVKFEEFDGLNRIIFSRPNKTVRGNF-QAKGVMKML 255
>gi|426193565|gb|EKV43498.1| hypothetical protein AGABI2DRAFT_210241 [Agaricus bisporus var.
bisporus H97]
Length = 326
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/231 (41%), Positives = 145/231 (62%), Gaps = 3/231 (1%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
IF GQHIL N + ++++ P D V+E+GPGTGNLT+K+LE +K V AIE+D
Sbjct: 41 IFNTARFGQHILKNAQTCQRCA-EANLKPTDKVMEVGPGTGNLTIKILEKAKHVTAIEMD 99
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTE-FPQFDLVVANIPYGISSPLVAKLVYGTK 120
RM + +R S +L+V+ D +K E P F++ ++N PY ISSPLV KL+
Sbjct: 100 PRMAAEVIKRVQGSPAQRKLDVVIGDFVKVEPLPYFEVCISNTPYQISSPLVFKLLSHRP 159
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
FR A L+ Q+EFA RL+A PG + ++RL+ NV+L A V+ +++VS+ DF P P+V+SSV
Sbjct: 160 LFRVAILMFQREFASRLVARPGTALWSRLSANVQLYAKVDNIINVSRNDFRPPPQVESSV 219
Query: 181 VIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLSKQ 231
+ + P P V +E+ R FS+ NKT+ F Q K V+++L +++
Sbjct: 220 IRMVPIDPPPPVKFEEFDGMNRIIFSRPNKTVRGNF-QAKGVMKMLEQNRK 269
>gi|409075015|gb|EKM75401.1| hypothetical protein AGABI1DRAFT_46548 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 326
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/231 (41%), Positives = 145/231 (62%), Gaps = 3/231 (1%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
IF GQHIL N + ++++ P D V+E+GPGTGNLT+K+LE +K V AIE+D
Sbjct: 41 IFNTARFGQHILKNAQTCQRCA-EANLKPTDKVMEVGPGTGNLTIKILEKAKHVTAIEMD 99
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTE-FPQFDLVVANIPYGISSPLVAKLVYGTK 120
RM + +R S +L+V+ D +K E P F++ ++N PY ISSPLV KL+
Sbjct: 100 PRMAAEVIKRVQGSPAQRKLDVVIGDFVKVEPLPYFEVCISNTPYQISSPLVFKLLSHRP 159
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
FR A L+ Q+EFA RL+A PG + ++RL+ NV+L A V+ +++VS+ DF P P+V+SSV
Sbjct: 160 LFRVAILMFQREFASRLVARPGTALWSRLSANVQLYAKVDNIINVSRNDFRPPPQVESSV 219
Query: 181 VIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLSKQ 231
+ + P P V +E+ R FS+ NKT+ F Q K V+++L +++
Sbjct: 220 IRMVPIDPPPPVKFEEFDGMNRIIFSRPNKTVRGNF-QAKGVMKMLEQNRK 269
>gi|239610737|gb|EEQ87724.1| dimethyladenosine transferase [Ajellomyces dermatitidis ER-3]
Length = 330
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/194 (45%), Positives = 124/194 (63%)
Query: 33 TVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE 92
TVLEIGPGTGNLT+K+LE +KKV A+E+D RM + +R RL V+ D +KT+
Sbjct: 10 TVLEIGPGTGNLTVKILEKAKKVIAVELDPRMAAEVTKRVQGKPEQKRLEVLLGDVIKTD 69
Query: 93 FPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVN 152
P FD+ ++N PY ISSPL KL+ + R L+ Q+EFA RL A PGD ++RL+VN
Sbjct: 70 LPYFDVCISNTPYQISSPLTFKLLAIDPAPRVCILMFQREFAMRLFAKPGDKLYSRLSVN 129
Query: 153 VKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTL 212
++ A ++ +M V K +F P P V+SSVV I PK P ++ DEW R F +KNKT+
Sbjct: 130 AQMWARIDHIMKVGKNNFKPPPAVESSVVRIVPKNPRPQISYDEWDGLLRVAFVRKNKTM 189
Query: 213 GATFKQKKKVIELL 226
++F V+++L
Sbjct: 190 RSSFLGTTSVLDML 203
>gi|302654957|ref|XP_003019274.1| hypothetical protein TRV_06678 [Trichophyton verrucosum HKI 0517]
gi|291182988|gb|EFE38629.1| hypothetical protein TRV_06678 [Trichophyton verrucosum HKI 0517]
Length = 364
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 94/218 (43%), Positives = 129/218 (59%), Gaps = 14/218 (6%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQH+L N V +IV K+ + DTVLE+GPG+GNLT+K+LE +KKV A+E+D RM L
Sbjct: 40 GQHVLKNPGVAQAIVDKADLKQSDTVLEVGPGSGNLTVKILEKAKKVIAVELDPRMAAEL 99
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
+R RL V+ D +KTE ISSPL KL+ + R L+
Sbjct: 100 TKRVQGKPEQKRLEVLLGDVMKTE--------------ISSPLTFKLLATNPAPRVCILM 145
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q+EFA RL A PGD ++RL+VN ++ A ++ +M V K +F P P V+SSVV I PK
Sbjct: 146 FQREFAMRLFAKPGDKLYSRLSVNAQMWAKIDHIMKVGKNNFKPPPAVESSVVRIVPKVP 205
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
PD++ DEW R F +KNKTL ++F V+ +L
Sbjct: 206 RPDISYDEWDGLLRIAFVRKNKTLRSSFLGTTSVVSML 243
>gi|302509638|ref|XP_003016779.1| hypothetical protein ARB_05072 [Arthroderma benhamiae CBS 112371]
gi|291180349|gb|EFE36134.1| hypothetical protein ARB_05072 [Arthroderma benhamiae CBS 112371]
Length = 364
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 94/218 (43%), Positives = 129/218 (59%), Gaps = 14/218 (6%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQH+L N V +IV K+ + DTVLE+GPG+GNLT+K+LE +KKV A+E+D RM L
Sbjct: 40 GQHVLKNPGVAQAIVDKADLKQSDTVLEVGPGSGNLTVKILEKAKKVIAVELDPRMAAEL 99
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
+R RL V+ D +KTE ISSPL KL+ + R L+
Sbjct: 100 TKRVQGKPEQKRLEVLLGDVMKTE--------------ISSPLTFKLLATNPAPRVCILM 145
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q+EFA RL A PGD ++RL+VN ++ A ++ +M V K +F P P V+SSVV I PK
Sbjct: 146 FQREFAMRLFAKPGDKLYSRLSVNAQMWAKIDHIMKVGKNNFKPPPAVESSVVRIVPKVP 205
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
PD++ DEW R F +KNKTL ++F V+ +L
Sbjct: 206 RPDISYDEWDGLLRIAFVRKNKTLRSSFLGTTSVVSML 243
>gi|298706896|emb|CBJ25860.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 310
Score = 173 bits (439), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 90/199 (45%), Positives = 127/199 (63%)
Query: 21 SIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDR 80
IV ++++ D VLEIGPGTGNLT++LLE +K+V A+E+D RMV + +R + +
Sbjct: 2 GIVDRAAVKRTDVVLEIGPGTGNLTVRLLERAKRVIAVELDTRMVREVMKRVEGTEWEKS 61
Query: 81 LNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLLQKEFARRLLAS 140
L +I D LK P FD++VAN+PY ISSPL+ KL+ FR A ++ Q+EFA+RL A
Sbjct: 62 LQIIQGDVLKVPLPFFDVLVANVPYNISSPLLFKLLAHRPMFRCAVIMFQEEFAQRLTAR 121
Query: 141 PGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAEIPDVNLDEWRAF 200
P + RL+VN +L+A V+ + V++ +F P PKVDS VV I + P VN EW
Sbjct: 122 PNTDMWCRLSVNTQLLAKVDQLFKVNRNNFRPPPKVDSRVVRIELRNPPPPVNFTEWDGM 181
Query: 201 TRTCFSKKNKTLGATFKQK 219
R F++K+KTL AT K
Sbjct: 182 IRVIFNRKHKTLRATLTTK 200
>gi|392587330|gb|EIW76664.1| rRNA adenine dimethylase [Coniophora puteana RWD-64-598 SS2]
Length = 325
Score = 173 bits (438), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 91/218 (41%), Positives = 138/218 (63%), Gaps = 1/218 (0%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQHIL N ++ +IV K+++ P D VLE+GPGTGNLT+++LE +K A+E+D RM +
Sbjct: 47 GQHILKNPQIATTIVEKANLRPTDRVLEVGPGTGNLTVRILEKAKHCTAVEMDPRMAAEV 106
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
+R + +L +I D +K P FD+ ++N PY ISSPLV +L+ FR A L+
Sbjct: 107 TKRVQGTPEQRKLEIIIGDFVKATLPYFDVCISNTPYQISSPLVFRLLSHRPIFRCAILM 166
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q+EFA RL+A P ++RL NV+L A V+ +M V K +F P P V+SSV+ + P+
Sbjct: 167 FQREFALRLIARPDTELWSRLGANVQLYAKVDLIMHVGKNNFRPAPLVESSVIRLVPRDP 226
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
P V +E+ R FS++NKT+ A+F + VI+++
Sbjct: 227 PPPVRFEEFDGLGRIVFSRRNKTIHASF-LARGVIDMM 263
>gi|389743290|gb|EIM84475.1| rRNA adenine dimethylase [Stereum hirsutum FP-91666 SS1]
Length = 325
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/225 (42%), Positives = 140/225 (62%), Gaps = 1/225 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
IF + GQHIL N + IV K+++ P D VLE+GPGTGNLT+++LE +K A+E+D
Sbjct: 40 IFNTERFGQHILKNPSIAQDIVDKANLRPTDKVLEVGPGTGNLTVRILEKAKHCTAVEMD 99
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RM L +R +L ++ D +K P FD+ ++N PY ISSPL+ +L+
Sbjct: 100 PRMAAELTKRVQGKPEQRKLEIMIGDFVKATLPYFDVCISNTPYQISSPLIFRLLSHRPL 159
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A P + ++RL+ NV+L A V+ +M+V K +F P P V+SSVV
Sbjct: 160 FRCAILMFQREFALRLVARPASTLWSRLSANVQLYAKVDLIMNVGKNNFRPPPNVESSVV 219
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
+ P P V +E+ R FS++NKT+ A+F K V+E+L
Sbjct: 220 RVVPLDPPPPVRFEEFDGLGRIVFSRRNKTVHASFG-AKGVVEML 263
>gi|392578160|gb|EIW71288.1| hypothetical protein TREMEDRAFT_67675 [Tremella mesenterica DSM
1558]
Length = 319
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/216 (41%), Positives = 134/216 (62%), Gaps = 3/216 (1%)
Query: 1 YIFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEI 60
++F + GQHILTN V SI +++ P D VLE+GPGTGNLT+++L ++V A+E+
Sbjct: 36 HLFNTERFGQHILTNPLVAQSI---ANLKPTDVVLEVGPGTGNLTMRILPAVRRVVAVEM 92
Query: 61 DERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTK 120
D RM + +R +L +I D +K + P FD+ ++N PY ISSPLV +L+
Sbjct: 93 DPRMAAEVQKRVLGKPEQKKLEMIIGDFVKADLPYFDVCISNTPYQISSPLVFRLLSHRP 152
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
R+A L+ Q+EFA RL+A+P + RL+ NV+L A VE ++ V K +F P P+V+SSV
Sbjct: 153 LIRTAVLMFQREFALRLVATPSSKLWCRLSANVQLYARVEHLLKVGKGNFRPPPQVESSV 212
Query: 181 VIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATF 216
V + P+ P + +E+ TR FS+ NK + A F
Sbjct: 213 VRLSPRDPPPPIRFEEFDGLTRIVFSRANKHVRACF 248
>gi|154310501|ref|XP_001554582.1| hypothetical protein BC1G_07171 [Botryotinia fuckeliana B05.10]
Length = 214
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 119/182 (65%)
Query: 5 HKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERM 64
+K GQHIL N V ++IV+K+++ P DTVLE+GPGTGNLT+++LE +KKV A+E+D RM
Sbjct: 31 NKDYGQHILKNPGVAEAIVKKANLKPTDTVLEVGPGTGNLTVRILESAKKVIAVEVDPRM 90
Query: 65 VEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRS 124
+ +R RL V+ D +KTE P FD+ ++N PY ISSPLV KL+ R
Sbjct: 91 AAEVTKRVQGKPEQKRLEVLLGDVIKTELPHFDVCISNTPYQISSPLVFKLLSLPNPPRC 150
Query: 125 ATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIR 184
+ ++ Q+EFA RL A PGDS + RL+VN + A + +M V K +F P P+ +S V I
Sbjct: 151 SVVMFQREFALRLTARPGDSLYCRLSVNAQFFAKITPIMKVGKNNFRPPPQGESCVGRIE 210
Query: 185 PK 186
PK
Sbjct: 211 PK 212
>gi|342888753|gb|EGU87972.1| hypothetical protein FOXB_01455 [Fusarium oxysporum Fo5176]
Length = 343
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/217 (42%), Positives = 136/217 (62%), Gaps = 4/217 (1%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
++ + GQHIL N + D IV K+++ P DTVLEIGPGTG LT ++LE +K V A+E+D R
Sbjct: 29 YNTNIGQHILKNPGIADMIVAKANLKPTDTVLEIGPGTGVLTTRILEQAKAVKAVELDIR 88
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQ----FDLVVANIPYGISSPLVAKLVYGT 119
M L +R +L +I D K + P+ FD+ ++N PY ISS +++KL+
Sbjct: 89 MGTELTKRVQGKPEQQKLEIIMGDFAKLDLPEALPPFDVCISNTPYQISSIIISKLISLP 148
Query: 120 KSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSS 179
+ R + L++Q+EF RL A PGDS ++RL+VN + + V + V K +F P P+V+S
Sbjct: 149 RPPRVSILMVQREFGLRLCARPGDSLYSRLSVNTQFTSKVALIAKVGKNNFSPPPEVESV 208
Query: 180 VVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATF 216
VV + P+ E+P N+ E R CFS+KNKTL A+F
Sbjct: 209 VVRLEPRPEVPAANIQELDGMLRICFSRKNKTLRASF 245
>gi|388583183|gb|EIM23485.1| rRNA adenine dimethylase [Wallemia sebi CBS 633.66]
Length = 318
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/208 (42%), Positives = 126/208 (60%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQHIL N V +IV K+S+ D V EIGPGTGNLT ++LE +K IE+D RM L
Sbjct: 40 GQHILKNPLVAQAIVDKASLRATDKVFEIGPGTGNLTARILEKAKSCQVIEMDPRMAAEL 99
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
++R RL ++ D +K + P FD+V++N PY ISS +V +++ R A L+
Sbjct: 100 SKRFQGKPEQRRLEIVIGDFVKADLPFFDVVISNCPYSISSHIVFRILSHRPICRVAILM 159
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q+EFA RL A PG + RL+ N +L + ++ +M VSK +F P P+V+SSVV I P
Sbjct: 160 FQREFALRLCARPGTEMWCRLSANAQLYSKIDHIMKVSKGNFRPPPQVESSVVRIVPLDP 219
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATF 216
P V +E+ TR F+++NKT + F
Sbjct: 220 PPPVKFEEFDGLTRVLFTRRNKTCRSNF 247
>gi|212543995|ref|XP_002152152.1| dimethyladenosine transferase [Talaromyces marneffei ATCC 18224]
gi|210067059|gb|EEA21152.1| dimethyladenosine transferase [Talaromyces marneffei ATCC 18224]
Length = 401
Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 92/226 (40%), Positives = 140/226 (61%), Gaps = 8/226 (3%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+ GQHIL N + D+IV K++I + V GPGTG LT ++L +K AIE+D R
Sbjct: 35 FNTDIGQHILKNPGIADAIVDKANIKEHEVV---GPGTGVLTRRILAKAKSCTAIELDPR 91
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKT---EFPQFDLVVANIPYGISSPLVAKLVYGTK 120
M L + + +L +I D +K E FD+ ++N PY ISSPLV KL+ +
Sbjct: 92 MAAELTKMVQGTPMQKKLRIILGDFIKVDLKEIGHFDVFISNTPYQISSPLVFKLLAMPR 151
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
R + L++Q+EFA+RL+A PGD+ ++RL+VN + A ++ V K +F P P+V+SSV
Sbjct: 152 PPRVSVLMVQREFAQRLIARPGDAMYSRLSVNAQFHAICSHILKVGKNNFSPPPQVESSV 211
Query: 181 VIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATF--KQKKKVIE 224
V I P+ + PD++ +E R CF++KNKTL ++F KQ +++IE
Sbjct: 212 VKIEPRPDRPDISWEELDGMLRICFNRKNKTLRSSFFVKQVRELIE 257
>gi|296420592|ref|XP_002839853.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636059|emb|CAZ84044.1| unnamed protein product [Tuber melanosporum]
Length = 294
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 121/209 (57%), Gaps = 25/209 (11%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQHIL N V +IV K+ + D VLE+GPGTGNLT+K+LE ++KV A+E+D RM L
Sbjct: 42 GQHILKNPGVAQAIVNKAGLKQSDVVLEVGPGTGNLTVKILEQARKVIAVEMDPRMAAEL 101
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
+R R+ ++ D +KTE P FD+ ++N PY ISSPLV KL+ + + R+ L+
Sbjct: 102 TKRVQGKPEQTRVEILLGDVIKTELPYFDVCISNTPYQISSPLVFKLLALSPAPRTCILM 161
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q+EFA R++A PGD+ + RL+ V+SSV+ I PK
Sbjct: 162 FQREFAMRVVAQPGDTLYCRLS-------------------------VESSVIRIEPKNP 196
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
P ++ DEW R F +KNKT+ A FK
Sbjct: 197 RPPISYDEWDGLLRIVFVRKNKTIAAGFK 225
>gi|242788270|ref|XP_002481185.1| dimethyladenosine transferase [Talaromyces stipitatus ATCC 10500]
gi|218721332|gb|EED20751.1| dimethyladenosine transferase [Talaromyces stipitatus ATCC 10500]
Length = 421
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 92/244 (37%), Positives = 142/244 (58%), Gaps = 23/244 (9%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPD------------------DTVLEIGPGTGNLT 45
F+ GQHIL N + D+IV K++I D + ++GPGTG LT
Sbjct: 35 FNTDIGQHILKNPGIADAIVDKANIKEHEVVADMLSISCKTRIAQADNIAQVGPGTGVLT 94
Query: 46 LKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKT---EFPQFDLVVAN 102
++L +K AIE+D RM L + + +L +I D +K E FD+ ++N
Sbjct: 95 RRILAKAKSCTAIELDPRMAAELTKMVQGTPMQRKLKIILGDFIKVDLKEIGHFDVFISN 154
Query: 103 IPYGISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFV 162
PY ISSPLV KL+ + R + L++Q+EFA+RL+A PGD+ ++RL+VN + A +
Sbjct: 155 TPYQISSPLVFKLLAMPRPPRVSILMVQREFAQRLIARPGDAMYSRLSVNAQFHAICSHI 214
Query: 163 MDVSKRDFLPCPKVDSSVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATF--KQKK 220
+ V K +F P P+V+SSVV I P+ + PD++ +E R CF++KNKTL ++F KQ +
Sbjct: 215 LKVGKNNFSPPPQVESSVVRIEPRPDRPDISWEELDGMLRICFNRKNKTLRSSFFVKQVR 274
Query: 221 KVIE 224
++IE
Sbjct: 275 ELIE 278
>gi|389585805|dbj|GAB68535.1| dimethyladenosine transferase [Plasmodium cynomolgi strain B]
Length = 350
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/217 (42%), Positives = 119/217 (54%), Gaps = 35/217 (16%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ +K GQH+L N +LD I+ + I D VLEIG GTGNLT+KLL ++KKV I+ID
Sbjct: 56 MILYKKHGQHLLKNPGILDKILLAAKIKSSDVVLEIGCGTGNLTVKLLPIAKKVITIDID 115
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RMV NIPY ISSPL+ KL+
Sbjct: 116 ARMV-----------------------------------TNIPYKISSPLIFKLIAHRPL 140
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
F+ A L+ QKEFA R+LA+ GDS ++RL VNVKL V + +V + F P PKVDS ++
Sbjct: 141 FKCAVLMFQKEFAERMLANVGDSNYSRLTVNVKLFCKVVKICNVDRSSFNPPPKVDSVIL 200
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
+ PK VN DEW R CFS+K KTL A FK+
Sbjct: 201 KLIPKENNFFVNFDEWDNLLRICFSRKRKTLHAIFKR 237
>gi|284161199|ref|YP_003399822.1| dimethyladenosine transferase [Archaeoglobus profundus DSM 5631]
gi|284011196|gb|ADB57149.1| dimethyladenosine transferase [Archaeoglobus profundus DSM 5631]
Length = 251
Score = 159 bits (402), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 91/208 (43%), Positives = 124/208 (59%), Gaps = 2/208 (0%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KSKGQHIL +++ L IVR + ++ +D VLE+G G GNLT LL KKV+ IEID R
Sbjct: 5 KSKGQHILVDKKYLYKIVRYADLSYNDVVLEVGCGLGNLTRLLLRSVKKVYGIEIDSRFC 64
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSA 125
+IL + AD R +I DALK +FP+FD VANIPY ISSPL KL+ F+ A
Sbjct: 65 KILREKFADEIESGRFVLIEGDALKVDFPKFDKFVANIPYQISSPLTFKLL--KHDFKLA 122
Query: 126 TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP 185
+ QKEFA RL+A G ++ RL+V K E + + + F P PKV+S++V I P
Sbjct: 123 VVTYQKEFAERLVAREGSKKYGRLSVVAKAYCRAEILDIIPPKAFRPRPKVESAIVRIFP 182
Query: 186 KAEIPDVNLDEWRAFTRTCFSKKNKTLG 213
+ E+ N + + R FS++ K G
Sbjct: 183 EPEVVVENKEIFEDLVRFAFSRRRKKFG 210
>gi|401413144|ref|XP_003886019.1| putative dimethyladenosine transferase [Neospora caninum Liverpool]
gi|325120439|emb|CBZ55993.1| putative dimethyladenosine transferase [Neospora caninum Liverpool]
Length = 367
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/223 (43%), Positives = 133/223 (59%), Gaps = 12/223 (5%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
K GQH+L NQ VLD IV+ + I DTVLEIGPGTGNLT++LL V+++V A+++D R
Sbjct: 51 LQKKFGQHLLKNQAVLDKIVQAADIRSSDTVLEIGPGTGNLTMRLLPVAREVVALDVDAR 110
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
MV + +RA +GF + L V DAL+++ FD A P PL + + R
Sbjct: 111 MVSEVKKRAISNGFMN-LVVRHGDALRSDLGTFD---AQQP-----PLQERDT--STVTR 159
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A L+ QKEF RL+A PGD + RLA NV L V+ V V + F P PKVDS VV +
Sbjct: 160 CAVLMFQKEFGERLMAQPGDKNYCRLAANVSLFCTVQRVCKVEAKHFTPPPKVDSVVVKV 219
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
P+ + DV+ EW R CF +KN+TL A F+ + ++ +L
Sbjct: 220 VPRPNLLDVDFKEWDGLMRICFGRKNRTLHALFR-RSSILSML 261
>gi|297294370|ref|XP_001085304.2| PREDICTED: probable dimethyladenosine transferase [Macaca mulatta]
Length = 284
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/216 (40%), Positives = 118/216 (54%), Gaps = 29/216 (13%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+ GQHIL N +++SI+ KV A E+D
Sbjct: 28 LMFNTGIGQHILKNPLIINSII-----------------------------DKVVACELD 58
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
R+V L++R + +L V+ D LKT+ P FD VAN+PY ISSP V KL+
Sbjct: 59 PRLVAELHKRVQGTPVASKLQVLVGDVLKTDLPFFDTCVANLPYQISSPFVFKLLLHRPF 118
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
FR A L+ Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV
Sbjct: 119 FRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVV 178
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
I PK P +N EW R F +KNKTL A FK
Sbjct: 179 RIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFK 214
>gi|320590414|gb|EFX02857.1| dimethyladenosine transferase [Grosmannia clavigera kw1407]
Length = 318
Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 119/189 (62%), Gaps = 2/189 (1%)
Query: 41 TGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVV 100
TGN+T ++LE ++K AIE+D RM + +R +L V+ DA+KTEFP FD+ +
Sbjct: 54 TGNITTRILEKARKCIAIELDPRMAAEVTKRVQGGPLQKKLEVLLGDAIKTEFPPFDVCI 113
Query: 101 ANIPYGISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVE 160
+N PY ISSPLV KL+ R+A L+ QKEFA+RL+A PGD+ + RL+VN + A +
Sbjct: 114 SNTPYQISSPLVFKLLSLPNPPRTAVLMFQKEFAQRLVARPGDTLYCRLSVNAQFFARIA 173
Query: 161 FVMDVSKRDFLPCPKVDSSVVIIRPK--AEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
V+ V K +F P P+V+S+VV I PK +E P N E R F++KN+T+ A+F
Sbjct: 174 HVLKVGKANFNPPPQVESAVVRITPKTGSERPKFNFSEMDGMLRVAFNRKNRTMRASFAS 233
Query: 219 KKKVIELLR 227
K+ + L R
Sbjct: 234 KEVLAMLAR 242
>gi|315230155|ref|YP_004070591.1| dimethyladenosine transferase [Thermococcus barophilus MP]
gi|315183183|gb|ADT83368.1| dimethyladenosine transferase [Thermococcus barophilus MP]
Length = 280
Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 131/219 (59%), Gaps = 8/219 (3%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQ+ L ++ V ++ I ++TVLEIGPG G LT +L + +KKV+A+E D R+VEIL
Sbjct: 22 GQNFLIVDDIIKREVERAEIKANETVLEIGPGLGFLTDELSKYAKKVYAVEKDSRLVEIL 81
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
+ + + +I DALK EFP+FD +V+N+PY ISSP+ K + F+ A L+
Sbjct: 82 QKEYS----WKNVEIIRGDALKVEFPEFDKIVSNLPYQISSPITFKFL--RYDFKKAVLI 135
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q EFA+R+ A PGD ++RL+V V+ ADVE V + + F P PKVDS+V+I+ PK +
Sbjct: 136 YQLEFAQRMTAKPGDKNYSRLSVMVQAKADVELVERIGRGAFYPKPKVDSAVIILNPKPK 195
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLR 227
+ LD+ + + F + K K ++EL +
Sbjct: 196 EEQIELDD--SLVKALFQHRRKKASKALKDSYHMLELTK 232
>gi|346969877|gb|EGY13329.1| dimethyladenosine transferase [Verticillium dahliae VdLs.17]
Length = 337
Score = 155 bits (393), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 86/204 (42%), Positives = 123/204 (60%), Gaps = 22/204 (10%)
Query: 25 KSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVI 84
K+ + P DTVLEIGPGTGNLT+++LE +KK+ AIE D RM
Sbjct: 33 KADLKPTDTVLEIGPGTGNLTVRILENAKKLIAIEFDPRM-------------------- 72
Query: 85 SKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDS 144
+ + K ++ FD++++N PY ISSPLV K++ K R A L+ Q EF +RL+A PGD
Sbjct: 73 AAEVTKVDWVPFDVLISNTPYQISSPLVFKMLAMPKPPRQAILMFQLEFGQRLVAKPGDK 132
Query: 145 EFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPK--AEIPDVNLDEWRAFTR 202
+ RL+VN A VM VSK +F P P+VDS VV I PK +E P + +E+ R
Sbjct: 133 LYGRLSVNANFWATCSNVMKVSKANFRPPPQVDSCVVRIVPKQGSERPSIAFEEFDGLLR 192
Query: 203 TCFSKKNKTLGATFKQKKKVIELL 226
CF++KN+T+ A++ K+V+ +L
Sbjct: 193 ICFNRKNRTMRASWLGTKEVLSML 216
>gi|337283605|ref|YP_004623079.1| dimethyladenosine transferase [Pyrococcus yayanosii CH1]
gi|334899539|gb|AEH23807.1| dimethyladenosine transferase [Pyrococcus yayanosii CH1]
Length = 275
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 132/222 (59%), Gaps = 11/222 (4%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQ+ L + V++ V +++I DTVLE+GPG G LT KL E + KV+AIE D R+VEIL
Sbjct: 21 GQNFLIVEDVIERSVERAAIGERDTVLEVGPGLGFLTEKLAEKAGKVYAIERDARLVEIL 80
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
R+ D + VI DALK E+P F+ VV+N+PY ISSP +L+ F A L+
Sbjct: 81 -RKEYD---WKNVEVIKGDALKVEWPPFNKVVSNLPYQISSPFTFRLL--RHEFEVAVLM 134
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q EFA R++A PGD ++RL++ V+ +A+ E V + F P PKVDS+VV+IRPK
Sbjct: 135 YQLEFALRMVAKPGDKNYSRLSLMVQALAEAEIAERVGRGAFYPRPKVDSAVVVIRPKPP 194
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLSK 230
V LDE + F + K + ++ I +L L+K
Sbjct: 195 SERVELDE--NLVKALFQHRRKVVAKALRES---IHMLGLTK 231
>gi|327400294|ref|YP_004341133.1| ribosomal RNA small subunit methyltransferase A [Archaeoglobus
veneficus SNP6]
gi|327315802|gb|AEA46418.1| Ribosomal RNA small subunit methyltransferase A [Archaeoglobus
veneficus SNP6]
Length = 250
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/210 (44%), Positives = 126/210 (60%), Gaps = 4/210 (1%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KSKGQHI++ + I + ++ DTVLE+G GTG LT LLE + KV+ IEID R
Sbjct: 3 FFKSKGQHIVSKA-IARRIAGYAELSKKDTVLEVGCGTGVLTSVLLERAGKVYGIEIDAR 61
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
V++L + A R +I DA+K EFP F+ V+NIPY ISSPL KL+ F
Sbjct: 62 FVKLLQEKFAKEIDEGRFILIHGDAMKVEFPPFNKFVSNIPYFISSPLTFKLL--RHDFD 119
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A ++ Q+EFA RL+A G++ + RL+V VK A E V VS++ F P P VDS+VV +
Sbjct: 120 VAVVMYQREFAERLVARKGEN-YGRLSVVVKAYAKPEIVEYVSRKAFRPPPSVDSAVVRL 178
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLG 213
K EI NL + R CFS++ K LG
Sbjct: 179 IKKPEIEVENLQIFEDLVRYCFSRRRKQLG 208
>gi|375083677|ref|ZP_09730695.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Thermococcus litoralis DSM 5473]
gi|374741677|gb|EHR78097.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Thermococcus litoralis DSM 5473]
Length = 273
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 93/236 (39%), Positives = 138/236 (58%), Gaps = 18/236 (7%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQ+ L + V+ V ++ I +TVLEIGPG G LT +L + +KKV+AIE D R++EIL
Sbjct: 21 GQNFLIVEDVIQREVERAEIKESETVLEIGPGLGVLTDELAKRAKKVYAIEKDSRIIEIL 80
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
R D + +I DALK +FP FD +V+N+PY ISSP+ KL+ F+ A L+
Sbjct: 81 RREYR----WDNVELIHGDALKIDFPYFDKIVSNLPYQISSPITFKLL--KYDFKKAVLI 134
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q EFA+R++A PGD ++RL+V V+ A+VE V + + F P PKVDS+V+++ PK +
Sbjct: 135 YQLEFAQRMVAKPGDKNYSRLSVMVQAKAEVELVEKIGRGAFYPKPKVDSAVIVMTPKPK 194
Query: 189 IPDVNLDE---------WRAFTRTCFSKKNKTLGAT---FKQKKKVIELLRLSKQK 232
V+L+E R LG T FK+ K +IE + S+++
Sbjct: 195 DEQVDLNENLVKALFQHRRKLASKALKDSYHMLGLTKDEFKKLKPIIEHIPHSQKR 250
>gi|307353999|ref|YP_003895050.1| dimethyladenosine transferase [Methanoplanus petrolearius DSM
11571]
gi|307157232|gb|ADN36612.1| dimethyladenosine transferase [Methanoplanus petrolearius DSM
11571]
Length = 257
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 92/216 (42%), Positives = 128/216 (59%), Gaps = 5/216 (2%)
Query: 10 QHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILN 69
QH LT+ + I S I D TVLEIGPG G LT +LLE KV AIEID +M+EIL
Sbjct: 7 QHFLTDPDAIRKIAHFSDIK-DQTVLEIGPGKGALTKELLERGAKVIAIEIDPKMIEILG 65
Query: 70 RRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLL 129
R AD RLN++++DA++ ++P FD+V+AN+PY SS + +L+ F+ A L+
Sbjct: 66 SRFADEIDSGRLNLLNEDAVRCDYPDFDIVIANLPYSASSKITFRLL--EHGFKEAVLMY 123
Query: 130 QKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAEI 189
QKEFA R++A PG S RL+V V+ A V ++++ F P P VDS VV I K E+
Sbjct: 124 QKEFALRMMALPGTSNCGRLSVMVQTYAKVMPLLNLPPEAFSPPPAVDSMVVRITMKEEL 183
Query: 190 --PDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVI 223
P + + + R FS + KTL + K + VI
Sbjct: 184 TYPVDDPEFYSILVRELFSHRRKTLKKSLKSSRSVI 219
>gi|323445795|gb|EGB02231.1| hypothetical protein AURANDRAFT_35437 [Aureococcus anophagefferens]
Length = 192
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 110/166 (66%)
Query: 5 HKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERM 64
+K GQ+ L N ++D+IV ++ + P D+VLEIGPGTGNLT+KLL +KK+ +E D RM
Sbjct: 26 NKDLGQNFLKNPAIVDAIVERAKLQPTDSVLEIGPGTGNLTVKLLAQAKKLTCVEFDRRM 85
Query: 65 VEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRS 124
V + +R + RL ++ D LK P FD+ VAN+PY ISSP + KL+ FRS
Sbjct: 86 VREVAKRVENDPRKHRLEMVHGDVLKVALPYFDVCVANLPYNISSPFLFKLLAHRPHFRS 145
Query: 125 ATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDF 170
A ++ Q+EFA+RL A PGD+ + RL+VN +L+A V ++ V + +F
Sbjct: 146 AVIMFQEEFAQRLSAKPGDALYCRLSVNTQLLAKVTQLIKVGRNNF 191
>gi|325955928|ref|YP_004286538.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Lactobacillus acidophilus 30SC]
gi|385816825|ref|YP_005853215.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Lactobacillus
amylovorus GRL1118]
gi|325332493|gb|ADZ06401.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Lactobacillus acidophilus 30SC]
gi|327182763|gb|AEA31210.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Lactobacillus amylovorus GRL1118]
Length = 294
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 134/233 (57%), Gaps = 18/233 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+F K+K GQ+ L +Q + IV + I P D V+EIGPG G+LT +LL KV A E
Sbjct: 20 YFVKAKKNLGQNFLVDQAAILGIVESADIQPGDQVIEIGPGIGSLTEQLLLAGAKVFAYE 79
Query: 60 IDERMVEILN----RRAADSGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPY 105
+D+ + EIL+ ++ D+ +R +I KD LK F + FD+ VVAN+PY
Sbjct: 80 VDDSLPEILHNELPKKIGDAPLDERFKLILKDVLKANFEEDLAVFFDMSKPIKVVANLPY 139
Query: 106 GISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDV 165
I++P++ L F S TL++QKE A RL A PG+ E+ L ++V+ +V+ ++V
Sbjct: 140 YITTPIIFALAESDLHFASLTLMMQKEVAERLEAKPGNKEYGPLTISVQTEMNVKLALEV 199
Query: 166 SKRDFLPCPKVDSSVVIIRPKAEIPDVN-LDEWRAFTRTCFSKKNKTLGATFK 217
F+P PKVDS+VV++ P AE P +N + + CFS++ KTL K
Sbjct: 200 KSSSFMPRPKVDSAVVVLTPLAEKPAINDRKHFIWVVKMCFSQRRKTLNNNLK 252
>gi|332158063|ref|YP_004423342.1| dimethyladenosine transferase [Pyrococcus sp. NA2]
gi|331033526|gb|AEC51338.1| dimethyladenosine transferase [Pyrococcus sp. NA2]
Length = 271
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 133/224 (59%), Gaps = 13/224 (5%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQH + + V+ V + +N D VLEIGPG G LT +L + +KKV+AIE+D +M++IL
Sbjct: 21 GQHFIIVEDVIRKAVETADVNEKDVVLEIGPGLGFLTNELAKRAKKVYAIELDRKMIQIL 80
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
+ + +I DA+K E+P+F+ VV+NIPY ISSP KL+ K F A ++
Sbjct: 81 KNEYK----WNNVEIIEGDAIKLEWPEFNKVVSNIPYQISSPFTFKLL--KKDFELAVVM 134
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q EFA R+ A PG ++RL++ + +ADVE VM + + F P PKVDS++V+IRP+ +
Sbjct: 135 YQLEFALRMTARPGSKNYSRLSLMTQALADVEIVMKIGRGAFYPRPKVDSALVVIRPRKD 194
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLSKQK 232
V L+E + F + KT+ K I +L ++K K
Sbjct: 195 --KVELNE--NLVKALFQHRRKTVSRALKDS---IHMLGITKDK 231
>gi|315037470|ref|YP_004031038.1| dimethyladenosine transferase [Lactobacillus amylovorus GRL 1112]
gi|312275603|gb|ADQ58243.1| dimethyladenosine transferase [Lactobacillus amylovorus GRL 1112]
Length = 294
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 134/233 (57%), Gaps = 18/233 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+F K+K GQ+ L +Q + IV + I P D V+EIGPG G+LT +LL KV A E
Sbjct: 20 YFVKAKKNLGQNFLVDQAAILGIVESAYIQPGDQVIEIGPGIGSLTEQLLLAGAKVFAYE 79
Query: 60 IDERMVEILN----RRAADSGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPY 105
+D+ + EIL+ ++ D+ +R +I KD LK F + FD+ VVAN+PY
Sbjct: 80 VDDSLPEILHNELPKKIGDAPLDERFKLILKDVLKANFEEDLAGFFDMSKPIKVVANLPY 139
Query: 106 GISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDV 165
I++P++ L F S TL++QKE A RL A PG+ E+ L ++V+ +V+ ++V
Sbjct: 140 YITTPIIFALAESDLHFASLTLMMQKEVAERLEAKPGNKEYGPLTISVQTEMNVKLALEV 199
Query: 166 SKRDFLPCPKVDSSVVIIRPKAEIPDVN-LDEWRAFTRTCFSKKNKTLGATFK 217
F+P PKVDS+VV++ P AE P +N + + CFS++ KTL K
Sbjct: 200 KSSSFMPRPKVDSAVVVLTPLAEKPAINDRKHFIWVVKMCFSQRRKTLNNNLK 252
>gi|336477201|ref|YP_004616342.1| dimethyladenosine transferase [Methanosalsum zhilinae DSM 4017]
gi|335930582|gb|AEH61123.1| dimethyladenosine transferase [Methanosalsum zhilinae DSM 4017]
Length = 271
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 86/208 (41%), Positives = 124/208 (59%), Gaps = 8/208 (3%)
Query: 7 SKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVE 66
S QH L + R+L+ I+ +S I P+D VLEIG G GNLT K+ +KK AIE+D +V+
Sbjct: 15 SHDQHFLVDNRILERIIEESRIGPEDVVLEIGAGVGNLTEKIASKAKKTIAIELDPNLVD 74
Query: 67 ILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSAT 126
+L+ R D H+ + +IS D L+ EFP F+ VVAN+PY ISSP+ KL+ F
Sbjct: 75 VLHDRFGD---HEEIQIISGDVLEVEFPPFNKVVANLPYSISSPVTFKLL--RYDFDLGV 129
Query: 127 LLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPK 186
L+ Q EFARR++A G +++RL+V + AD E +M + F P PKV S+VV + P+
Sbjct: 130 LMYQYEFARRMVACTGSEDYSRLSVATQYYADAEIIMKIPASAFSPPPKVMSAVVKLVPR 189
Query: 187 AEIPDVNLDE--WRAFTRTCFSKKNKTL 212
P +DE + F F ++ K L
Sbjct: 190 P-FPYKVVDESFFFKFITAVFGQRRKKL 216
>gi|408380984|ref|ZP_11178534.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Methanobacterium formicicum DSM 3637]
gi|407816249|gb|EKF86811.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Methanobacterium formicicum DSM 3637]
Length = 284
Score = 152 bits (384), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 91/228 (39%), Positives = 128/228 (56%), Gaps = 11/228 (4%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
+ KGQ+ LTN +L I+ + +N D VLEIG G G LTL L E S KV A E D+R+V
Sbjct: 19 RRKGQNYLTNDHILAKIIENAQLNDSDVVLEIGAGIGTLTLPLAEKSSKVVAFEQDKRIV 78
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSA 125
+L R + G + + V+ DA K EFP F+ VV+N+PY ISSP+ KL+ +F A
Sbjct: 79 RVLRERLHELGISN-VEVMEGDATKMEFPYFNKVVSNLPYQISSPITFKLL--NYNFDYA 135
Query: 126 TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP 185
L+ Q EFA+R++A PG+S ++RL+V + L E + +V K FLP P++ S+V+ + P
Sbjct: 136 ILMYQLEFAQRMVAQPGESNYSRLSVMMNLCTHTELLFNVPKNAFLPPPRISSAVIKLTP 195
Query: 186 KAEIPDVNLDEWRAFTRTC---FSKKNKTLGATFKQKKKVIELLRLSK 230
K N + F TC F K K G Q I L L +
Sbjct: 196 KK-----NPQADKFFANTCRALFQHKKKKSGKALLQSFHEISDLNLDR 238
>gi|389853158|ref|YP_006355392.1| dimethyladenosine transferase [Pyrococcus sp. ST04]
gi|388250464|gb|AFK23317.1| putative dimethyladenosine transferase [Pyrococcus sp. ST04]
Length = 274
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 130/217 (59%), Gaps = 8/217 (3%)
Query: 7 SKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVE 66
S GQ+ L + ++D V + ++ +D VLE+GPG G LT KL E +KKV+AIE+D R+VE
Sbjct: 19 SLGQNFLIVENIIDKAVEVAEVDKNDIVLEVGPGLGFLTNKLSERAKKVYAIEVDRRIVE 78
Query: 67 ILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSAT 126
IL + + + +I DA+K +P+F+ VV+N+PY ISSP KL+ F A
Sbjct: 79 ILEKEYN----WNNVEIIVGDAVKVPWPEFNKVVSNLPYQISSPFTFKLL--KHEFEKAV 132
Query: 127 LLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPK 186
L+ Q EFA R+ A PG ++RL++ V+ +ADVE +M + + F P PKVDS++V+I+PK
Sbjct: 133 LMYQLEFALRMTAKPGSRNYSRLSLMVQALADVEIIMKIGRGAFYPRPKVDSALVLIKPK 192
Query: 187 AEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVI 223
+ L+E + F + K + ++ +I
Sbjct: 193 PSEERIELNE--DLVKALFQHRRKLVSKALRESSHMI 227
>gi|20094370|ref|NP_614217.1| dimethyladenosine transferase (rRNA methylase) [Methanopyrus
kandleri AV19]
gi|27151577|sp|Q8TWU7.1|RSMA_METKA RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|19887438|gb|AAM02147.1| Dimethyladenosine transferase (rRNA methylase) [Methanopyrus
kandleri AV19]
Length = 278
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/224 (41%), Positives = 131/224 (58%), Gaps = 17/224 (7%)
Query: 1 YIFFHKSK---------GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV 51
Y+ + +SK GQH + + +L+ +V + + DD VLEIGPG G LT L+
Sbjct: 6 YLAYLRSKYGIRPRRRLGQHFMVDDNILEFMVEAAEVREDDIVLEIGPGPGLLTRYLMTR 65
Query: 52 SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFPQ-FDLVVANIPYGISSP 110
+ +V A+E+D RMVEIL R + G L ++ D L+ + P + VVANIPY ISSP
Sbjct: 66 AGQVIAVELDGRMVEILKR---ELGEAPNLEIVRADFLEYDVPDDVNKVVANIPYNISSP 122
Query: 111 LVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDF 170
+ KL+ A L Q+EFA R++A PG +++RL V V L+ADVE + V +R F
Sbjct: 123 ITFKLL--ELDIDVAVLTYQREFAERMVAEPGSKKYSRLTVMVNLLADVELLRGVPRRAF 180
Query: 171 LPCPKVDSSVVIIRPKAEI--PDVNLDEWRAFTRTCFSKKNKTL 212
+P P+V SSVV + PK+E PDV+ D + R F KNKT+
Sbjct: 181 IPPPRVGSSVVRLTPKSEEERPDVDPDTLESVCRALFQHKNKTV 224
>gi|435850914|ref|YP_007312500.1| dimethyladenosine transferase [Methanomethylovorans hollandica DSM
15978]
gi|433661544|gb|AGB48970.1| dimethyladenosine transferase [Methanomethylovorans hollandica DSM
15978]
Length = 274
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 123/213 (57%), Gaps = 6/213 (2%)
Query: 1 YIFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEI 60
Y + QH L ++ +LD IV + I P + VLEIG G GNLT +LL ++ KV AIE
Sbjct: 13 YGIYGGQHDQHFLVDEGILDRIVESADIVPGEVVLEIGAGIGNLTQRLLHLADKVVAIEF 72
Query: 61 DERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTK 120
D ++V +L R + D+L++I D LK EFP FD VVAN+PY ISS + KL
Sbjct: 73 DPKLVAVLEDRFRGN---DKLHIIHGDVLKVEFPIFDKVVANLPYSISSEITFKLF--KH 127
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
F+ L+ Q EFA+R++A PG +++RL VN AD +M V K F P P+V+S+V
Sbjct: 128 DFKLGILMYQYEFAQRMIAKPGSGDYSRLTVNTAYFADASIIMKVPKGVFSPPPQVESAV 187
Query: 181 VIIRPK-AEIPDVNLDEWRAFTRTCFSKKNKTL 212
V + P+ A + D + F F+K+ K +
Sbjct: 188 VKVCPRPAPFTVTDKDFFLRFVTAIFNKRRKKI 220
>gi|116197625|ref|XP_001224624.1| hypothetical protein CHGG_06968 [Chaetomium globosum CBS 148.51]
gi|88178247|gb|EAQ85715.1| hypothetical protein CHGG_06968 [Chaetomium globosum CBS 148.51]
Length = 371
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 117/184 (63%), Gaps = 2/184 (1%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKV-HAIEIDE 62
F K GQHIL N + D+IV K+ + P D V+E+GPGTGN+T++ L+ +KK+ A+E+D
Sbjct: 34 FDKDFGQHILKNPGISDAIVDKAYLKPTDVVVEVGPGTGNITVRALDKAKKLTRAVELDP 93
Query: 63 RMVEILNRRAADSGFHDRLNVISKDALK-TEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
RM + +R + +L VI D +K E P D +++N PY ISSPL+ K++
Sbjct: 94 RMGAEVTKRVQGTPLAKKLEVILGDVIKMPEMPPCDALISNTPYQISSPLIFKMLAMPNP 153
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
R A L+ Q+EFA+RL+A PGD+ ++RL+VNV A + +M V K++F P PKV+S V
Sbjct: 154 PRVAVLMFQREFAKRLVAKPGDALYSRLSVNVNFWATCKHIMKVGKQNFKPPPKVESDVA 213
Query: 182 IIRP 185
P
Sbjct: 214 NPYP 217
>gi|58336557|ref|YP_193142.1| dimethyladenosine transferase [Lactobacillus acidophilus NCFM]
gi|227903108|ref|ZP_04020913.1| dimethyladenosine transferase [Lactobacillus acidophilus ATCC 4796]
gi|62900454|sp|Q5FMG3.1|RSMA_LACAC RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|58253874|gb|AAV42111.1| dimethyladenosine transferase [Lactobacillus acidophilus NCFM]
gi|227869094|gb|EEJ76515.1| dimethyladenosine transferase [Lactobacillus acidophilus ATCC 4796]
Length = 294
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 133/233 (57%), Gaps = 18/233 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+F K+K GQ+ L +Q + IV + I P D V+EIGPG G+LT +LL KV A E
Sbjct: 20 YFVKAKKNLGQNFLVDQDAILGIVEAADIQPGDQVIEIGPGIGSLTEQLLLAGAKVFAYE 79
Query: 60 IDERMVEILN----RRAADSGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPY 105
+D+ + EIL+ ++ + +DR ++ KD LK +F FD+ VVAN+PY
Sbjct: 80 VDDSLPEILHNELPKKIGEQSLNDRFKLLLKDVLKADFQNDLAGFFDMKQPIKVVANLPY 139
Query: 106 GISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDV 165
I++P++ L F S TL++QKE A RL A PG+ E+ L ++V+ +V+ ++V
Sbjct: 140 YITTPIIFALSESDLHFSSLTLMMQKEVAERLEAKPGNKEYGPLTISVQTEMNVKIALEV 199
Query: 166 SKRDFLPCPKVDSSVVIIRPKAEIPDV-NLDEWRAFTRTCFSKKNKTLGATFK 217
F+P PKVDSSVV++ P E P + N + + CFS++ KTL K
Sbjct: 200 KSTSFMPRPKVDSSVVVLTPLQERPKIENRKHFIWVVKMCFSQRRKTLNNNLK 252
>gi|240102961|ref|YP_002959270.1| dimethyladenosine transferase [Thermococcus gammatolerans EJ3]
gi|259494259|sp|C5A594.1|RSMA_THEGJ RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|239910515|gb|ACS33406.1| Ribosomal RNA adenine methylase transferase (Dimethyladenosine
transferase) (ksgA) [Thermococcus gammatolerans EJ3]
Length = 278
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 132/214 (61%), Gaps = 8/214 (3%)
Query: 5 HKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERM 64
+++ GQ+ L +++ V+++ ++ DTVLEIGPG G LT +L + + KV+AIE D RM
Sbjct: 17 NRTLGQNFLIVPDIIERNVKRAELSEKDTVLEIGPGLGVLTDELSKKAGKVYAIEADSRM 76
Query: 65 VEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRS 124
+EIL R + + +I DA+K E+P+F+ +V+N+PY ISSP+ KL+ F
Sbjct: 77 IEILQREYS----WPNVELIKGDAVKVEWPEFNKMVSNLPYQISSPVTFKLL--KHEFER 130
Query: 125 ATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIR 184
A L+ Q EFA R++A PGD ++RL++ V+ A+VE V + + F P PKVDS+VV++
Sbjct: 131 AVLIYQLEFAERMIAKPGDRNYSRLSLMVQAKANVELVERIGRGAFWPRPKVDSAVVVLE 190
Query: 185 PKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
PK E + L+E + F + T+ + K+
Sbjct: 191 PKPEKERIELNE--NLVKALFQHRRSTVASALKK 222
>gi|260102234|ref|ZP_05752471.1| dimethyladenosine transferase [Lactobacillus helveticus DSM 20075]
gi|260083975|gb|EEW68095.1| dimethyladenosine transferase [Lactobacillus helveticus DSM 20075]
Length = 291
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 132/233 (56%), Gaps = 18/233 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+F K+K GQ+ L +Q + IV + I+ D V+EIGPG G+LT +LL KV A E
Sbjct: 20 YFVKAKKNLGQNFLIDQNAILGIVEAADIHAGDQVIEIGPGIGSLTEQLLLAGAKVFAYE 79
Query: 60 IDERMVEILN----RRAADSGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPY 105
+D+ + EIL ++ D+ DR ++ KD LK F + FD+ VVAN+PY
Sbjct: 80 VDDSLPEILQNELPKKIGDAPLEDRFKLMLKDVLKANFKEDLAGFFDMSKPIKVVANLPY 139
Query: 106 GISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDV 165
I++P++ L F S TL++QKE A RL A PG E+ L ++V+ DV+ ++V
Sbjct: 140 YITTPIIFALAESDLHFASLTLMMQKEVAERLEAKPGSKEYGPLTISVQTEMDVKVALEV 199
Query: 166 SKRDFLPCPKVDSSVVIIRPKAEIPDV-NLDEWRAFTRTCFSKKNKTLGATFK 217
+ F+P PKVDSSVV++ P P++ N + + CFS++ KTL K
Sbjct: 200 NHNSFMPRPKVDSSVVVLTPLKNKPEIENRKHFVWVVKMCFSQRRKTLNNNLK 252
>gi|161506815|ref|YP_001576769.1| dimethyladenosine transferase [Lactobacillus helveticus DPC 4571]
gi|172048354|sp|A8YX55.1|RSMA_LACH4 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|160347804|gb|ABX26478.1| Dimethyladenosine transferase [Lactobacillus helveticus DPC 4571]
Length = 294
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 132/233 (56%), Gaps = 18/233 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+F K+K GQ+ L +Q + IV + I+ D V+EIGPG G+LT +LL KV A E
Sbjct: 20 YFVKAKKNLGQNFLIDQNAILGIVEAADIHAGDQVIEIGPGIGSLTEQLLLAGAKVFAYE 79
Query: 60 IDERMVEILN----RRAADSGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPY 105
+D+ + EIL ++ D+ DR ++ KD LK F + FD+ VVAN+PY
Sbjct: 80 VDDSLPEILQNELPKKIGDAPLEDRFKLMLKDVLKANFKEDLAGFFDMSKPIKVVANLPY 139
Query: 106 GISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDV 165
I++P++ L F S TL++QKE A RL A PG E+ L ++V+ DV+ ++V
Sbjct: 140 YITTPIIFALAESDLHFASLTLMMQKEVAERLEAKPGSKEYGPLTISVQTEMDVKVALEV 199
Query: 166 SKRDFLPCPKVDSSVVIIRPKAEIPDV-NLDEWRAFTRTCFSKKNKTLGATFK 217
+ F+P PKVDSSVV++ P P++ N + + CFS++ KTL K
Sbjct: 200 NHNSFMPRPKVDSSVVVLTPLKNKPEIENRKHFVWVVKMCFSQRRKTLNNNLK 252
>gi|333988491|ref|YP_004521098.1| ribosomal RNA small subunit methyltransferase A [Methanobacterium
sp. SWAN-1]
gi|333826635|gb|AEG19297.1| Ribosomal RNA small subunit methyltransferase A [Methanobacterium
sp. SWAN-1]
Length = 280
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/216 (40%), Positives = 130/216 (60%), Gaps = 14/216 (6%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K KGQ+ L N+ VL I+ + ++ +DTVLEIG G G LT+ L + + V A+E D ++
Sbjct: 18 KRKGQNYLVNKTVLSKIITNAELSSEDTVLEIGAGIGTLTIPLAKRVRHVFAVEQDSKVA 77
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSA 125
E+L R D G + +NVI DA K EFP+F+ VV+N+PY ISSP+ KL+ F A
Sbjct: 78 EVLIERLEDLGVSN-VNVIVGDATKMEFPEFNKVVSNLPYKISSPITFKLLKN--KFDFA 134
Query: 126 TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP 185
L+ Q+EFA R++A G+ ++RL+V + + VEF+ +VSK F P PKV S+V+ + P
Sbjct: 135 ILMYQREFADRMVAKAGEKNYSRLSVMMHFCSKVEFLFEVSKDSFFPKPKVSSAVIKLTP 194
Query: 186 KAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKK 221
K + +DE+ KT+ A F+ KKK
Sbjct: 195 K-NAAESGVDEFFL----------KTVRALFQHKKK 219
>gi|385813043|ref|YP_005849436.1| ribosomal RNA small subunit methyltransferase A [Lactobacillus
helveticus H10]
gi|323465762|gb|ADX69449.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
helveticus H10]
Length = 294
Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 131/233 (56%), Gaps = 18/233 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+F K+K GQ+ L +Q + IV + I+ D V+EIGPG G+LT +LL KV A E
Sbjct: 20 YFVKAKKNLGQNFLIDQNAILGIVEAADIHAGDQVIEIGPGIGSLTEQLLLAGAKVFAYE 79
Query: 60 IDERMVEILN----RRAADSGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPY 105
+D+ + EIL ++ D+ DR ++ KD LK F + FD+ VVAN+PY
Sbjct: 80 VDDSLPEILQNELPKKIGDAPLEDRFKLMLKDVLKANFKEDLAGFFDMSKPIKVVANLPY 139
Query: 106 GISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDV 165
I++P++ L F S TL++QKE A RL A PG E+ L ++V+ DV+ ++V
Sbjct: 140 YITTPIIFALAESDLHFASLTLMMQKEVAERLEAKPGSKEYGPLTISVQTEMDVKVALEV 199
Query: 166 SKRDFLPCPKVDSSVVIIRPKAEIPDV-NLDEWRAFTRTCFSKKNKTLGATFK 217
F+P PKVDSSVV++ P P++ N + + CFS++ KTL K
Sbjct: 200 KHNSFMPRPKVDSSVVVLTPLKNKPEIENRKHFVWVVKMCFSQRRKTLNNNLK 252
>gi|403514251|ref|YP_006655071.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Lactobacillus
helveticus R0052]
gi|403079689|gb|AFR21267.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Lactobacillus helveticus R0052]
Length = 294
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 132/233 (56%), Gaps = 18/233 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+F K+K GQ+ L +Q + IV + I+ D V+EIGPG G+LT +LL KV A E
Sbjct: 20 YFVKAKKNLGQNFLIDQNAILGIVEAADIHAGDQVIEIGPGIGSLTEQLLLDGAKVFAYE 79
Query: 60 IDERMVEILN----RRAADSGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPY 105
+D+ + EIL ++ D+ DR ++ KD LK F + FD+ VVAN+PY
Sbjct: 80 VDDSLPEILQNELPKKIGDAPLEDRFKLMLKDVLKANFKEDLAGFFDMSKPIKVVANLPY 139
Query: 106 GISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDV 165
I++P++ L F S TL++QKE A RL A PG E+ L ++V+ DV+ ++V
Sbjct: 140 YITTPIIFALAESDLHFASLTLMMQKEVAERLEAKPGSKEYGPLTISVQTEMDVKVALEV 199
Query: 166 SKRDFLPCPKVDSSVVIIRPKAEIPDV-NLDEWRAFTRTCFSKKNKTLGATFK 217
+ F+P PKVDSSVV++ P P++ N + + CFS++ KTL K
Sbjct: 200 NHNSFMPRPKVDSSVVVLTPLKNKPEIENRKHFVWVVKMCFSQRRKTLNNNLK 252
>gi|301101445|ref|XP_002899811.1| dimethyladenosine transferase, putative [Phytophthora infestans
T30-4]
gi|262102813|gb|EEY60865.1| dimethyladenosine transferase, putative [Phytophthora infestans
T30-4]
Length = 349
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/231 (43%), Positives = 132/231 (57%), Gaps = 25/231 (10%)
Query: 9 GQHILTNQRVLDSIVRKSSINP--DDTV--LEIGPGTGNLTLKLLEVSKK--VHAIEIDE 62
GQH+L + +LD IV S ++ DTV LEIGPGTGNLT LL+VS K VHA+E D
Sbjct: 41 GQHLLVSDGILDQIVAASELSDICSDTVRVLEIGPGTGNLTSTLLQVSPKMQVHAVEFDP 100
Query: 63 RMVEILNRR-----------AADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPL 111
RMVE L R S F D V + + F+ VANIPY +SS +
Sbjct: 101 RMVEQLKLRFPTEIESGSLVLEHSDFEDFRFVPDQKQETNQEKIFNACVANIPYQLSSIV 160
Query: 112 VAKLVYGT----KSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSK 167
V++L K+F+ A LL+Q+EFA RLLA PG+ ++RL+ N LVA+V V V +
Sbjct: 161 VSRLSNYMHRFPKTFKCAVLLVQEEFASRLLAEPGNKSYSRLSANTALVANVTSVAKVPR 220
Query: 168 RDFLPCPKVDSSVVIIRPK-AEIPDVN---LDEWRAFTRTCFSKKNKTLGA 214
FLP PKVDS V+ + P+ A +P + ++ A R CF +KNKTL A
Sbjct: 221 EHFLPPPKVDSRVIKLVPRAAALPSHDEQFFQKFDALLRLCFERKNKTLRA 271
>gi|168064371|ref|XP_001784136.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664336|gb|EDQ51060.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 274
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/201 (44%), Positives = 121/201 (60%), Gaps = 9/201 (4%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSI---NPDDTVLEIGPGTGNLTLKLLEVSKKVHAI 58
I F KSKGQHIL N + S+ +K+S+ + ++ GNLT+KLLEV K V A+
Sbjct: 72 IQFQKSKGQHILKNPLLRRSLFKKTSLLFSTIRVSYADVSLLLGNLTMKLLEVCK-VIAV 130
Query: 59 EIDERMVEILNRRAADSGFHDRLNV-----ISKDALKTEFPQFDLVVANIPYGISSPLVA 113
E+D RMV + RR + ++L V I LKTE P FD+ VAN+PY ISSP+
Sbjct: 131 ELDPRMVLEVTRRVQGTPCANKLQVWMLAVIQCYILKTELPYFDVCVANVPYMISSPITF 190
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
KL+ R A +L Q+EFA+ L+A PGDS F RL+ N +L+A V ++ V K + P
Sbjct: 191 KLLSHPPLVRCAVILFQEEFAQHLVAQPGDSLFCRLSANTQLLARVFHLLKVGKNNLRPP 250
Query: 174 PKVDSSVVIIRPKAEIPDVNL 194
PKVDSSVV I P+ +P +N
Sbjct: 251 PKVDSSVVRIEPRNPLPPINF 271
>gi|325957949|ref|YP_004289415.1| ribosomal RNA small subunit methyltransferase A [Methanobacterium
sp. AL-21]
gi|325329381|gb|ADZ08443.1| Ribosomal RNA small subunit methyltransferase A [Methanobacterium
sp. AL-21]
Length = 273
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 129/212 (60%), Gaps = 7/212 (3%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I K KGQ+ L N+ +L I++ S ++ +D VLEIG G G LT+ L + + KV+A+E D
Sbjct: 14 IKLDKRKGQNYLVNRDILSKIIQNSELSKNDRVLEIGAGIGTLTIPLAKNAGKVYAVEQD 73
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
+ +L +R D + VI +DA K + P + V++N+PY ISSP+ K++
Sbjct: 74 GKAANVLKKRLEKLEL-DNVEVIVEDATKMDLPSVNKVISNLPYQISSPITFKIL--ENP 130
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
F A L+ QKEFA+R++ASPGD ++RL+V + L ++ E + VS+ DF P PKV S+V+
Sbjct: 131 FEMAVLMYQKEFAQRMVASPGDRNYSRLSVMMYLYSEAEILFQVSENDFFPKPKVASAVI 190
Query: 182 IIRPKAEIPDVNLDEWRA-FTRTCFSKKNKTL 212
++PK DV++D + TR F K K +
Sbjct: 191 KMQPKI---DVDIDPFFVDVTRAMFQHKKKKI 219
>gi|254167515|ref|ZP_04874367.1| dimethyladenosine transferase [Aciduliprofundum boonei T469]
gi|197623778|gb|EDY36341.1| dimethyladenosine transferase [Aciduliprofundum boonei T469]
Length = 238
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 123/203 (60%), Gaps = 4/203 (1%)
Query: 10 QHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILN 69
Q+ L N ++ D IV+++ I PDD VLEIGPG G LT KLLE + V+AIEID+ + E L+
Sbjct: 6 QNFLINPKIADYIVKEAEIKPDDIVLEIGPGKGILTDKLLEKCE-VYAIEIDKTLCEYLS 64
Query: 70 RRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLL 129
D + RL++I DALK +FP+F+ +VANIPY ISSPL+ K++ F L+L
Sbjct: 65 IIFQDYIKNGRLHLICGDALKVDFPKFNKIVANIPYHISSPLLFKIL--EYEFERGILML 122
Query: 130 QKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAEI 189
Q EFA RL+A PG + RL+V + + + V + +F P P+VDS++V I K
Sbjct: 123 QYEFAERLVAKPGSKRYGRLSVMMYYNGEARILKRVKRGNFKPVPRVDSAIVKITKKDRF 182
Query: 190 PDVNLDEWRAFTRTCFSKKNKTL 212
+ D+ F R F ++ K +
Sbjct: 183 C-YDKDKLNEFVRKLFEQRRKKI 204
>gi|289596434|ref|YP_003483130.1| dimethyladenosine transferase [Aciduliprofundum boonei T469]
gi|289534221|gb|ADD08568.1| dimethyladenosine transferase [Aciduliprofundum boonei T469]
Length = 243
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 121/203 (59%), Gaps = 4/203 (1%)
Query: 10 QHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILN 69
Q+ L N ++ D IV+++ I P+D VLEIGPG G LT KLLE + V+AIEID+ + E LN
Sbjct: 11 QNFLINPKIADYIVKEAEIKPNDIVLEIGPGKGILTGKLLEKCE-VYAIEIDKTLCEYLN 69
Query: 70 RRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLL 129
D RL++I DALK FP+F+ +VANIPY ISSPL+ K++ F L+L
Sbjct: 70 IIFQDDIKDGRLHLICGDALKVNFPKFNKIVANIPYHISSPLLFKIL--EYEFERGILML 127
Query: 130 QKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAEI 189
Q EFA RL+A PG + RL+V + + + V + +F P P+VDS++V I K
Sbjct: 128 QYEFAERLVAKPGSKRYGRLSVMMYYNGEARILKRVKRGNFRPVPRVDSAIVKITKKDRF 187
Query: 190 PDVNLDEWRAFTRTCFSKKNKTL 212
+ D+ F R F ++ K +
Sbjct: 188 C-YDKDKLNEFVRKLFEQRRKKI 209
>gi|14591574|ref|NP_143656.1| dimethyladenosine transferase [Pyrococcus horikoshii OT3]
gi|3258259|dbj|BAA30942.1| 290aa long hypothetical dimethyladenosine transferase [Pyrococcus
horikoshii OT3]
Length = 290
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/224 (36%), Positives = 136/224 (60%), Gaps = 13/224 (5%)
Query: 7 SKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVE 66
S GQH L + V++ + +++N +D +LE+GPG G LT +L + +KKV+ IEID++++E
Sbjct: 41 SIGQHFLIIEDVIEKAIETANVNENDVILEVGPGLGFLTDELAKRAKKVYTIEIDQKIIE 100
Query: 67 ILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSAT 126
IL + + + + +I DA++ E+P+F+ VV+NIPY ISSP KL+ F A
Sbjct: 101 ILKKEYS----WNNVKIIQGDAVRVEWPKFNKVVSNIPYKISSPFTFKLL--KTDFERAV 154
Query: 127 LLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPK 186
++ Q EFA R++A PG ++RL++ + + +VE VM + K F P PKVDS++V+I P+
Sbjct: 155 VMYQLEFALRMVAKPGSRNYSRLSLMAQALGNVEIVMKIGKGAFYPRPKVDSALVLIEPR 214
Query: 187 AEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLSK 230
+ + L+E + F + KT+ K I +L +SK
Sbjct: 215 KD--KIVLNE--NLVKALFQHRRKTVPRALKDS---IHMLGVSK 251
>gi|57640834|ref|YP_183312.1| dimethyladenosine transferase [Thermococcus kodakarensis KOD1]
gi|62900463|sp|Q5JI54.1|RSMA_PYRKO RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|57159158|dbj|BAD85088.1| dimethyladenosine transferase [Thermococcus kodakarensis KOD1]
Length = 279
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 131/224 (58%), Gaps = 11/224 (4%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQ+ L +++ + ++ + DTVLEIGPG G LT L + + KV+AIE D R+VEIL
Sbjct: 21 GQNFLIVPDIIERNIERAEVGEKDTVLEIGPGLGVLTDPLSKRAGKVYAIEKDCRIVEIL 80
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
R + +I DALK E+P+F+ +V+N+PY ISSP+ KL+ ++ F A L+
Sbjct: 81 RREYN----WPNVEIIEGDALKVEWPEFNKMVSNLPYQISSPVTFKLL--SREFERAVLI 134
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q EFA R++A PGD ++RL++ V+ A E V + K F P PKVDS+VV++ PK
Sbjct: 135 FQLEFAERMVAKPGDKNYSRLSLMVRAKARAELVERIGKGAFWPRPKVDSAVVVLEPKPP 194
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLSKQK 232
++L+E + F + T+ A KK +L LSK K
Sbjct: 195 EERIDLNE--NLVKALFQHRRSTVSAAL---KKSAHMLGLSKDK 233
>gi|14520595|ref|NP_126070.1| dimethyladenosine transferase [Pyrococcus abyssi GE5]
gi|27151615|sp|Q9V1P8.1|RSMA_PYRAB RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|5457811|emb|CAB49301.1| ksgA dimethyladenosine transferase [Pyrococcus abyssi GE5]
gi|380741122|tpe|CCE69756.1| TPA: dimethyladenosine transferase [Pyrococcus abyssi GE5]
Length = 269
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 124/210 (59%), Gaps = 10/210 (4%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQH L + V+D + + ++ D VLE+GPG G LT +L + +KKV IE+D R++EIL
Sbjct: 21 GQHFLIVKDVIDKAIEVAEVSKSDVVLEVGPGLGFLTDELSKRAKKVFTIELDRRIIEIL 80
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
+ + + +I DA+K E+P F+ VV+NIPY ISSP KL+ F A ++
Sbjct: 81 RNEYS----WNNVEIIQGDAVKVEWPSFNKVVSNIPYQISSPFTFKLL--KMEFERAVVM 134
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q EFA R+ A PGD ++RL++ + +ADVE VM + K F P PKVDS++V+I PK +
Sbjct: 135 YQLEFALRMTAKPGDRNYSRLSLMTQALADVEIVMRIGKGAFYPKPKVDSALVLITPKKD 194
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
++N + + F + K + ++
Sbjct: 195 RIELN----ESLVKALFQHRRKVVSKALRE 220
>gi|254166890|ref|ZP_04873744.1| dimethyladenosine transferase [Aciduliprofundum boonei T469]
gi|197624500|gb|EDY37061.1| dimethyladenosine transferase [Aciduliprofundum boonei T469]
Length = 238
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 121/203 (59%), Gaps = 4/203 (1%)
Query: 10 QHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILN 69
Q+ L N ++ D IV+++ I P+D VLEIGPG G LT KLLE + V+AIEID+ + E LN
Sbjct: 6 QNFLINPKIADYIVKEAEIKPNDIVLEIGPGKGILTGKLLEKCE-VYAIEIDKTLCEYLN 64
Query: 70 RRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLL 129
D RL++I DALK FP+F+ +VANIPY ISSPL+ K++ F L+L
Sbjct: 65 IIFQDDIKDGRLHLICGDALKVNFPKFNKIVANIPYHISSPLLFKIL--EYEFERGILML 122
Query: 130 QKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAEI 189
Q EFA RL+A PG + RL+V + + + V + +F P P+VDS++V I K
Sbjct: 123 QYEFAERLVAKPGSKRYGRLSVMMYYNGEARILKRVKRGNFRPVPRVDSAIVKITKKDRF 182
Query: 190 PDVNLDEWRAFTRTCFSKKNKTL 212
+ D+ F R F ++ K +
Sbjct: 183 C-YDKDKLNEFVRKLFEQRRKKI 204
>gi|27151557|sp|O59487.2|RSMA_PYRHO RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
Length = 268
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/224 (36%), Positives = 136/224 (60%), Gaps = 13/224 (5%)
Query: 7 SKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVE 66
S GQH L + V++ + +++N +D +LE+GPG G LT +L + +KKV+ IEID++++E
Sbjct: 19 SIGQHFLIIEDVIEKAIETANVNENDVILEVGPGLGFLTDELAKRAKKVYTIEIDQKIIE 78
Query: 67 ILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSAT 126
IL + + + + +I DA++ E+P+F+ VV+NIPY ISSP KL+ F A
Sbjct: 79 ILKKEYS----WNNVKIIQGDAVRVEWPKFNKVVSNIPYKISSPFTFKLL--KTDFERAV 132
Query: 127 LLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPK 186
++ Q EFA R++A PG ++RL++ + + +VE VM + K F P PKVDS++V+I P+
Sbjct: 133 VMYQLEFALRMVAKPGSRNYSRLSLMAQALGNVEIVMKIGKGAFYPRPKVDSALVLIEPR 192
Query: 187 AEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLSK 230
+ + L+E + F + KT+ K I +L +SK
Sbjct: 193 KD--KIVLNE--NLVKALFQHRRKTVPRALKDS---IHMLGVSK 229
>gi|336055350|ref|YP_004563637.1| ribosomal RNA small subunit methyltransferase A [Lactobacillus
kefiranofaciens ZW3]
gi|333958727|gb|AEG41535.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
kefiranofaciens ZW3]
Length = 294
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 130/233 (55%), Gaps = 18/233 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+F K+K GQ+ L +Q + IV+ + I P+D V+EIGPG G+LT +LL KV A E
Sbjct: 20 YFVKAKKNLGQNFLVDQAAILGIVQAADIQPNDQVIEIGPGIGSLTEQLLLAGAKVFAYE 79
Query: 60 IDERMVEILNR----RAADSGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPY 105
+D+ + EIL + + R ++ KD LK F + FDL VVAN+PY
Sbjct: 80 VDDSLPEILQNELPPKIDNQPLSQRFKLLLKDVLKANFKEDLAGFFDLKKPIKVVANLPY 139
Query: 106 GISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDV 165
I++P++ L F S TL++QKE A RL ASPG+ E+ L ++V+ V + V
Sbjct: 140 YITTPIIFALAESDLHFASLTLMMQKEVAERLEASPGNKEYGPLTISVQTEMKVNLALQV 199
Query: 166 SKRDFLPCPKVDSSVVIIRPKAEIPDV-NLDEWRAFTRTCFSKKNKTLGATFK 217
S F+P PKVDSSVV++ P + P + N + + CF+++ KTL K
Sbjct: 200 SHNSFMPRPKVDSSVVVLTPLKDKPVIGNRQHFVWVVKMCFAQRRKTLNNNLK 252
>gi|395241868|ref|ZP_10418868.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
pasteurii CRBIP 24.76]
gi|394480616|emb|CCI85108.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
pasteurii CRBIP 24.76]
Length = 293
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 129/233 (55%), Gaps = 18/233 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+F K+K GQ+ L + + IV + + P D V+EIGPG G+LT +LL KV A E
Sbjct: 20 YFVKAKKNLGQNFLVDHAAIMGIVEAAEVKPGDQVIEIGPGIGSLTEQLLLAGAKVFAYE 79
Query: 60 IDERMVEILN----RRAADSGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPY 105
+D+ + EIL+ ++ D DR ++ KD L+ +F FD VVAN+PY
Sbjct: 80 VDDSLPEILHNELPQKIGDDELADRFKLLLKDILQADFRNDIGDFFDFDQEIKVVANLPY 139
Query: 106 GISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDV 165
I++P++ L +F S TL++QKE A RL A P ++ L + V+ VE + V
Sbjct: 140 YITTPIIFSLANSDLNFSSLTLMMQKEVAERLEAGPNSKDYGPLTIAVQTQMQVELALTV 199
Query: 166 SKRDFLPCPKVDSSVVIIRPKAEIPDV-NLDEWRAFTRTCFSKKNKTLGATFK 217
F+P PKVDSSVV+++P AE DV ++ + + CF+++ KTL K
Sbjct: 200 GHNSFMPAPKVDSSVVVLKPLAEKVDVGDVKHFNRIVKICFAQRRKTLNNNLK 252
>gi|312137230|ref|YP_004004567.1| dimethyladenosine transferase [Methanothermus fervidus DSM 2088]
gi|311224949|gb|ADP77805.1| dimethyladenosine transferase [Methanothermus fervidus DSM 2088]
Length = 283
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 113/171 (66%), Gaps = 3/171 (1%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQ+ L N+ + + I+ +++N DTVLEIGPG G LT+ + + +KKV AIE D +MVEIL
Sbjct: 27 GQNFLINEYIRNKIINYANLNKKDTVLEIGPGIGTLTIPMAKYAKKVIAIEKDCKMVEIL 86
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
R D D + +I+ DALK +FP+F+ VV+N+PY ISSP+ KL+ F L+
Sbjct: 87 KDRIHDLKI-DNIEIINADALKIKFPKFNKVVSNLPYTISSPITFKLL--NYDFNLGVLM 143
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSS 179
QKEFA+RL+A PG S ++RL+V + A+VE + + + F+P PKV S+
Sbjct: 144 YQKEFAQRLIAKPGTSNYSRLSVMMYFKANVELLDIIPPKSFIPRPKVKSA 194
>gi|383320663|ref|YP_005381504.1| dimethyladenosine transferase [Methanocella conradii HZ254]
gi|379322033|gb|AFD00986.1| dimethyladenosine transferase [Methanocella conradii HZ254]
Length = 270
Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 81/181 (44%), Positives = 117/181 (64%), Gaps = 6/181 (3%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K K QH L ++ VL IV + I+ ++ VLEIG G GNLT L + ++ V++IEID +
Sbjct: 9 KRKDQHFLIDRDVLRKIVDFADIHGNEDVLEIGAGPGNLTELLAQRARHVYSIEIDPALA 68
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSA 125
+L R DS + +I +ALK FP+FD VVAN+PY ISS + KL+ FR
Sbjct: 69 SLLEERFKDSN----VTIIMGNALKVAFPRFDKVVANLPYSISSEVTFKLL--RHDFRLG 122
Query: 126 TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP 185
L+ Q+EFARR++A G+SE++RL+V V+ ADVE +M V R F+P P+V+S+VV + P
Sbjct: 123 ILMYQREFARRMMAKVGESEYSRLSVGVQYFADVEVLMKVPPRAFIPPPEVESAVVKLTP 182
Query: 186 K 186
+
Sbjct: 183 R 183
>gi|300362465|ref|ZP_07058641.1| dimethyladenosine transferase [Lactobacillus gasseri JV-V03]
gi|300353456|gb|EFJ69328.1| dimethyladenosine transferase [Lactobacillus gasseri JV-V03]
Length = 296
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 129/234 (55%), Gaps = 21/234 (8%)
Query: 3 FFHKSK--GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEI 60
F H K GQ+ L + + IV + I P D V+EIGPG G+LT +LL KV A E+
Sbjct: 21 FMHAKKNLGQNFLVDLAAIKGIVEAADIQPGDQVIEIGPGIGSLTEQLLLAGAKVLAYEV 80
Query: 61 DERMVEILN----RRAADSGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPYG 106
D+ + EIL ++ A +R ++ KD LK F + DL +VAN+PY
Sbjct: 81 DQDLPEILKNELPQKVAGEELSNRFKLVMKDVLKANFTKDSDGFLDLNKSVKIVANLPYY 140
Query: 107 ISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVS 166
I++P++ L+ +F S TL++QKE A RL+A P E+ L + V+ +V+ +V
Sbjct: 141 ITTPIIFNLIKSNLAFSSLTLMMQKEVAERLVAKPKTKEYGPLTIAVQSRMNVKLAEEVK 200
Query: 167 KRDFLPCPKVDSSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTLGATFK 217
F+P PKVDS+VV++ P E PD+ D++ F + CF+++ KTL K
Sbjct: 201 STSFMPRPKVDSAVVVLTPLTEKPDI--DDYSFFDHVVKMCFAQRRKTLANNLK 252
>gi|227877971|ref|ZP_03995975.1| dimethyladenosine transferase [Lactobacillus crispatus JV-V01]
gi|256844351|ref|ZP_05549837.1| dimethyladenosine transferase [Lactobacillus crispatus 125-2-CHN]
gi|256849246|ref|ZP_05554679.1| dimethyladenosine transferase [Lactobacillus crispatus MV-1A-US]
gi|312978360|ref|ZP_07790102.1| dimethyladenosine transferase [Lactobacillus crispatus CTV-05]
gi|227862441|gb|EEJ69956.1| dimethyladenosine transferase [Lactobacillus crispatus JV-V01]
gi|256613429|gb|EEU18632.1| dimethyladenosine transferase [Lactobacillus crispatus 125-2-CHN]
gi|256714022|gb|EEU29010.1| dimethyladenosine transferase [Lactobacillus crispatus MV-1A-US]
gi|310894703|gb|EFQ43775.1| dimethyladenosine transferase [Lactobacillus crispatus CTV-05]
Length = 294
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 127/233 (54%), Gaps = 18/233 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+F K+K GQ+ L +Q + IV + I DD V+EIGPG G+LT +LL KV A E
Sbjct: 20 YFVKAKKNLGQNFLVDQTAILGIVEAAGIKKDDQVIEIGPGIGSLTEQLLLAGAKVFAYE 79
Query: 60 IDERMVEILN----RRAADSGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPY 105
+D+ + IL ++ D R +I KD LK +F FD VVAN+PY
Sbjct: 80 VDDSLPTILQNELPKKIDDQPLASRFKLILKDVLKADFKVDISDFFDFTKPIKVVANLPY 139
Query: 106 GISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDV 165
I++P++ L F S TL++QKE A RL A PG E+ L ++V+ +V+ + V
Sbjct: 140 YITTPIIFALAESDLHFTSLTLMMQKEVAERLEAQPGSKEYGPLTISVQTEMNVKLALQV 199
Query: 166 SKRDFLPCPKVDSSVVIIRPKAEIPDV-NLDEWRAFTRTCFSKKNKTLGATFK 217
S F+P PKVDSSVV++ P E P + N + + CFS++ KTL K
Sbjct: 200 SHNSFMPRPKVDSSVVVLTPLKEKPAIENRKHFIWVVKMCFSQRRKTLNNNLK 252
>gi|449688278|ref|XP_002166686.2| PREDICTED: probable dimethyladenosine transferase-like, partial
[Hydra magnipapillata]
Length = 220
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/148 (49%), Positives = 97/148 (65%), Gaps = 1/148 (0%)
Query: 79 DRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLLQKEFARRLL 138
++L++I D LK+E P FD VAN+PY ISSP V KL+ FR A L+ Q+EFA+RL+
Sbjct: 4 NKLHLIVGDVLKSELPYFDCCVANLPYQISSPFVFKLLLHRPFFRCAVLMFQREFAQRLV 63
Query: 139 ASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAEIPDVNLDEWR 198
A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV I PK P +N EW
Sbjct: 64 AKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVVRIEPKNPPPPINFQEWD 123
Query: 199 AFTRTCFSKKNKTLGATFKQKKKVIELL 226
R F +KNKTL A F K VI++L
Sbjct: 124 GLVRIAFVRKNKTLAACF-SSKAVIDML 150
>gi|410722277|ref|ZP_11361583.1| dimethyladenosine transferase [Methanobacterium sp. Maddingley
MBC34]
gi|410597312|gb|EKQ51939.1| dimethyladenosine transferase [Methanobacterium sp. Maddingley
MBC34]
Length = 284
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/228 (39%), Positives = 129/228 (56%), Gaps = 11/228 (4%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
+ KGQ+ L N +L IV +++N D VLEIG G G LT+ L S KV A E D+R+V
Sbjct: 19 RRKGQNYLINNHILTKIVENANLNDSDVVLEIGAGIGTLTIPLARKSAKVVAFEQDKRIV 78
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSA 125
IL R + + + V+ DA K +FP F+ VV+N+PY ISSP+ KL+ F A
Sbjct: 79 RILKERLQELEISN-VEVMEGDATKIDFPYFNKVVSNLPYQISSPITFKLL--KYDFDYA 135
Query: 126 TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP 185
L+ Q EFA+R++A PG+S ++RL+V + L E + V + FLP P++ S+V+ + P
Sbjct: 136 ILMYQLEFAQRMVAQPGESNYSRLSVMMNLCTRTELLFKVPRNAFLPPPRISSAVIKLVP 195
Query: 186 KAEIPDVNLDEWRAFTRTC---FSKKNKTLGATFKQKKKVIELLRLSK 230
+ E P V DE+ FT TC F K K G Q I L L +
Sbjct: 196 Q-ENPQV--DEF--FTNTCRALFQHKKKKSGKALLQSFHEISNLNLDR 238
>gi|262047261|ref|ZP_06020219.1| dimethyladenosine transferase [Lactobacillus crispatus MV-3A-US]
gi|423319703|ref|ZP_17297578.1| ribosomal RNA small subunit methyltransferase A [Lactobacillus
crispatus FB049-03]
gi|423320287|ref|ZP_17298159.1| ribosomal RNA small subunit methyltransferase A [Lactobacillus
crispatus FB077-07]
gi|260572506|gb|EEX29068.1| dimethyladenosine transferase [Lactobacillus crispatus MV-3A-US]
gi|405587748|gb|EKB61475.1| ribosomal RNA small subunit methyltransferase A [Lactobacillus
crispatus FB049-03]
gi|405607800|gb|EKB80761.1| ribosomal RNA small subunit methyltransferase A [Lactobacillus
crispatus FB077-07]
Length = 294
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 127/233 (54%), Gaps = 18/233 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+F K+K GQ+ L +Q + IV + I DD V+EIGPG G+LT +LL KV A E
Sbjct: 20 YFVKAKKNLGQNFLVDQTAILGIVEAAGIKKDDQVIEIGPGIGSLTEQLLLAGAKVFAYE 79
Query: 60 IDERMVEILN----RRAADSGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPY 105
+D+ + IL ++ D R +I KD LK +F FD VVAN+PY
Sbjct: 80 VDDSLPTILQNELPKKIDDQPLASRFKLILKDLLKADFKVDISDFFDFTKPIKVVANLPY 139
Query: 106 GISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDV 165
I++P++ L F S TL++QKE A RL A PG E+ L ++V+ +V+ + V
Sbjct: 140 YITTPIIFALAESDLHFTSLTLMMQKEVAERLEAQPGSKEYGPLTISVQTEMNVKLALQV 199
Query: 166 SKRDFLPCPKVDSSVVIIRPKAEIPDV-NLDEWRAFTRTCFSKKNKTLGATFK 217
S F+P PKVDSSVV++ P E P + N + + CFS++ KTL K
Sbjct: 200 SHNSFMPRPKVDSSVVVLTPLKEKPAIENRKHFIWVVKMCFSQRRKTLNNNLK 252
>gi|293381472|ref|ZP_06627467.1| dimethyladenosine transferase [Lactobacillus crispatus 214-1]
gi|290921942|gb|EFD98949.1| dimethyladenosine transferase [Lactobacillus crispatus 214-1]
Length = 294
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 127/233 (54%), Gaps = 18/233 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+F K+K GQ+ L +Q + IV + I DD V+EIGPG G+LT +LL KV A E
Sbjct: 20 YFVKAKKNLGQNFLVDQTAILGIVEAARIKKDDQVIEIGPGIGSLTEQLLLAGAKVFAYE 79
Query: 60 IDERMVEILN----RRAADSGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPY 105
+D+ + IL ++ D R +I KD LK +F FD VVAN+PY
Sbjct: 80 VDDSLPTILQNELPKKIDDQPLASRFKLILKDVLKADFKVDISDFFDFTKPIKVVANLPY 139
Query: 106 GISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDV 165
I++P++ L F S TL++QKE A RL A PG E+ L ++V+ +V+ + V
Sbjct: 140 YITTPIIFALAESDLHFTSLTLMMQKEVAERLEAQPGSKEYGPLTISVQTEMNVKLALQV 199
Query: 166 SKRDFLPCPKVDSSVVIIRPKAEIPDV-NLDEWRAFTRTCFSKKNKTLGATFK 217
S F+P PKVDSSVV++ P E P + N + + CFS++ KTL K
Sbjct: 200 SHNSFMPRPKVDSSVVVLTPLKEKPAIENRKHFIWVVKMCFSQRRKTLNNNLK 252
>gi|42518291|ref|NP_964221.1| dimethyladenosine transferase [Lactobacillus johnsonii NCC 533]
gi|385825157|ref|YP_005861499.1| dimethyladenosine transferase [Lactobacillus johnsonii DPC 6026]
gi|62900557|sp|Q74LI0.1|RSMA_LACJO RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|41582575|gb|AAS08187.1| dimethyladenosine transferase [Lactobacillus johnsonii NCC 533]
gi|329666601|gb|AEB92549.1| dimethyladenosine transferase [Lactobacillus johnsonii DPC 6026]
Length = 296
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/234 (36%), Positives = 128/234 (54%), Gaps = 21/234 (8%)
Query: 3 FFHKSK--GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEI 60
F H K GQ+ L + + IV + I P D V+EIGPG G+LT +LL KV A E+
Sbjct: 21 FMHAKKNLGQNFLVDLPAIKGIVEAADIQPGDQVIEIGPGIGSLTEQLLLAGAKVLAYEV 80
Query: 61 DERMVEILN----RRAADSGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPYG 106
D+ + EILN ++ DR ++ KD LK F + DL +VAN+PY
Sbjct: 81 DQDLPEILNNELPQKIDGEELKDRFKLVMKDVLKANFVEDNDGFLDLSKSVKIVANLPYY 140
Query: 107 ISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVS 166
I++P++ L+ F S TL++QKE A RL+A P E+ L++ V+ +V +V
Sbjct: 141 ITTPIIFNLIKSDLDFSSLTLMMQKEVAERLVAKPKTKEYGPLSIAVQSRMNVRLAEEVK 200
Query: 167 KRDFLPCPKVDSSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTLGATFK 217
F+P PKVDS+VV++ P E PD+N ++ F + CF+++ KTL K
Sbjct: 201 STSFMPRPKVDSAVVVLTPLLEKPDIN--DYAFFDHVVKMCFAQRRKTLANNLK 252
>gi|390960452|ref|YP_006424286.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Thermococcus
sp. CL1]
gi|390518760|gb|AFL94492.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Thermococcus sp. CL1]
Length = 272
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 127/219 (57%), Gaps = 8/219 (3%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQ+ L +++ V ++ +N D VLE+GPG G LT L + KV+AIE D R+VEIL
Sbjct: 21 GQNFLVVPDIIERNVERAGLNERDVVLEVGPGLGVLTDALARRAGKVYAIEKDHRLVEIL 80
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
R D + + +I DAL+ EFP+F+ +V+N+PY ISSP+ + + F A L+
Sbjct: 81 -RSEYD---WENVEIIEGDALRVEFPRFNKIVSNLPYQISSPITFRFL--KHDFERAVLI 134
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q EFA+R++A PGD ++RL++ V+ A E V + + F P PKVDS+VV++ PK
Sbjct: 135 YQLEFAQRMVAEPGDKNYSRLSLMVRAKAYAELVERIGRGAFWPKPKVDSAVVVLEPKPP 194
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLR 227
V L+E + F + T+ A K+ ++ L R
Sbjct: 195 GEQVELNE--NLVKALFQHRRSTVLAALKKSHHMLGLSR 231
>gi|212223555|ref|YP_002306791.1| dimethyladenosine transferase [Thermococcus onnurineus NA1]
gi|226732633|sp|B6YTK7.1|RSMA_THEON RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|212008512|gb|ACJ15894.1| dimethyladenosine transferase [Thermococcus onnurineus NA1]
Length = 272
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 133/220 (60%), Gaps = 14/220 (6%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQ+ L +++ V ++ ++ D VLEIGPG G LT L + + KV+AIE D R+VEIL
Sbjct: 21 GQNFLIVDDIIERNVERAELSGRDVVLEIGPGLGVLTDALSKRAGKVYAIEKDPRLVEIL 80
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAK-LVYGTKSFRSATL 127
+ S + +I DALK +FP+F+ +V+N+PY ISSP+ + L YG F A L
Sbjct: 81 RKEYNWSN----VEIIEGDALKVDFPEFNKIVSNLPYQISSPITFRFLGYG---FERAVL 133
Query: 128 LLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII--RP 185
+ Q EFA+R++A PGD ++RL++ V+ + VE V + + F P PKVDS+V+++ +P
Sbjct: 134 IYQLEFAQRMVARPGDRNYSRLSLMVQAKSYVELVERIGRGAFYPRPKVDSAVIVLEPKP 193
Query: 186 KAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIEL 225
K+E+ ++N D R F + T+ A K+ ++ L
Sbjct: 194 KSEVIELNED----LVRALFQHRRSTVAAALKKSHHMLGL 229
>gi|288930669|ref|YP_003434729.1| dimethyladenosine transferase [Ferroglobus placidus DSM 10642]
gi|288892917|gb|ADC64454.1| dimethyladenosine transferase [Ferroglobus placidus DSM 10642]
Length = 248
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 123/213 (57%), Gaps = 3/213 (1%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS+ QHIL ++R L IV + + DD VLE+G G GNLT LL+ +KKV+ IE D R V
Sbjct: 5 KSRDQHILKDKRYLKKIVSVAEVR-DDVVLEVGCGPGNLTSLLLKKAKKVYGIEKDRRFV 63
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSA 125
E+L ++ + +L +I DALK EFP+ D V+NIP+ ISSPL K++ F+ +
Sbjct: 64 ELLKKKFSGYIEEGKLEIIEGDALKVEFPECDKFVSNIPFSISSPLTFKVL--KHGFKLS 121
Query: 126 TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP 185
+ QKEFA RL+A G ++ RL+V K E V + + F P PKVD+++V I
Sbjct: 122 VVTYQKEFAERLVAREGSKKYGRLSVIAKAYCKAEIVDIIPRYAFKPVPKVDAAIVKIVH 181
Query: 186 KAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
+ EI NL+ + FS++ K ++
Sbjct: 182 EPEIKVENLEVFEDLVTFVFSRRRKKFSKILEE 214
>gi|417838640|ref|ZP_12484878.1| dimethyladenosine transferase [Lactobacillus johnsonii pf01]
gi|338762183|gb|EGP13452.1| dimethyladenosine transferase [Lactobacillus johnsonii pf01]
Length = 296
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/234 (36%), Positives = 128/234 (54%), Gaps = 21/234 (8%)
Query: 3 FFHKSK--GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEI 60
F H K GQ+ L + + IV + I P D V+EIGPG G+LT +LL KV A E+
Sbjct: 21 FMHAKKNLGQNFLIDLAAIKGIVEAADIKPGDQVIEIGPGIGSLTEQLLLAGAKVLAYEV 80
Query: 61 DERMVEILN----RRAADSGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPYG 106
D+ + EILN ++ DR ++ KD LK F + DL +VAN+PY
Sbjct: 81 DQDLPEILNNELPQKIDGEELKDRFKLVMKDVLKANFVEDNDGFLDLSKSVKIVANLPYY 140
Query: 107 ISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVS 166
I++P++ L+ F S TL++QKE A RL+A P E+ L++ V+ +V +V
Sbjct: 141 ITTPIIFNLIKSDLDFSSLTLMMQKEVAERLVAKPKTKEYGPLSIAVQSRMNVRLAEEVK 200
Query: 167 KRDFLPCPKVDSSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTLGATFK 217
F+P PKVDS+VV++ P E PD+N ++ F + CF+++ KTL K
Sbjct: 201 STSFMPRPKVDSAVVVLTPLLEKPDIN--DYAFFDHVVKMCFAQRRKTLANNLK 252
>gi|350525713|ref|YP_004885360.1| Dimethyladenosine transferase [Thermococcus sp. AM4]
gi|345650532|gb|AEO13922.1| Dimethyladenosine transferase [Thermococcus sp. AM4]
Length = 283
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 133/219 (60%), Gaps = 8/219 (3%)
Query: 5 HKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERM 64
+++ GQ+ L +++ V ++ ++ DTVLEIGPG G LT +L + KV+AIE D RM
Sbjct: 17 NRNLGQNFLIVPDIIERNVERAELSERDTVLEIGPGLGVLTDELSRRAGKVYAIEADNRM 76
Query: 65 VEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRS 124
+EIL + + + +I DA+K ++P+F+ +V+N+PY ISSP+ KL+ + F
Sbjct: 77 IEILRKEYS----WPNVELIEGDAVKVDWPEFNKMVSNLPYQISSPVTFKLL--RRDFER 130
Query: 125 ATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIR 184
A L+ Q EFA R++A PGD ++RL++ V+ A VE V + + F P PKVDS+VV+I+
Sbjct: 131 AVLIYQLEFAERMIARPGDKNYSRLSLMVQAKASVELVERIGRGAFWPRPKVDSAVVLIQ 190
Query: 185 PKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVI 223
PK + + L+E + F + T+ + ++ ++
Sbjct: 191 PKPKEERIELNE--NLVKALFQHRRSTVSSALRKSAHML 227
>gi|18978235|ref|NP_579592.1| dimethyladenosine transferase [Pyrococcus furiosus DSM 3638]
gi|397652488|ref|YP_006493069.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Pyrococcus
furiosus COM1]
gi|27151575|sp|Q8TH24.1|RSMA_PYRFU RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|18894050|gb|AAL81987.1| dimethyladenosine transferase (s-adenosylmethionine-6-n'
[Pyrococcus furiosus DSM 3638]
gi|393190079|gb|AFN04777.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pyrococcus furiosus COM1]
Length = 273
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 125/210 (59%), Gaps = 8/210 (3%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQ+ L + V+ V S I D VLE+GPG G LT +L + + KV+AIE+D+R++EIL
Sbjct: 21 GQNFLIMRDVIIKAVETSEIKKSDVVLEVGPGFGFLTDELSKRAGKVYAIELDKRIIEIL 80
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
+ + +I DA+K E+P+F+ VV+NIPY ISSP KL+ F A ++
Sbjct: 81 ENEYN----WENVEIIQGDAVKIEWPEFNKVVSNIPYQISSPFTFKLL--KHDFEKAVVM 134
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q EFA+R++A PGD ++RL++ V +A+ + VM + + F P PKVDS++V+I PK +
Sbjct: 135 YQLEFAKRMVAKPGDRNYSRLSLMVNALANAKIVMKIGRGAFYPKPKVDSALVLIVPKPK 194
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
+ L+E + F + K + K+
Sbjct: 195 DERIELNE--NLVKALFQHRRKLVSKALKE 222
>gi|409095945|ref|ZP_11215969.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Thermococcus zilligii AN1]
Length = 283
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 84/217 (38%), Positives = 126/217 (58%), Gaps = 8/217 (3%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQ+ L +++ V ++ ++ DTVLEIGPG G LT +L + KV AIE D R+VEIL
Sbjct: 21 GQNFLIVPDIIERNVARAELSGSDTVLEIGPGLGVLTDELSRRAGKVFAIEKDPRIVEIL 80
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
R + + + +I DA++ E+P+F+ +V+N+PY ISSP+ KL+ F A L+
Sbjct: 81 RREYS----WNNVEIIEGDAMEVEWPEFNKMVSNLPYQISSPVTFKLL--NYEFERAVLI 134
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q EFA R++A PG ++RL++ V A E V + + F P P+VDS+VV++ PK
Sbjct: 135 YQLEFAERMVARPGTRNYSRLSLMVSAKARAELVERIGRGAFWPKPEVDSAVVVLEPKPR 194
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIEL 225
V LDE TR F + K + A K + +I L
Sbjct: 195 SERVELDE--NLTRALFQHRRKKVYAALKDSRHMIGL 229
>gi|255527800|ref|ZP_05394651.1| dimethyladenosine transferase [Clostridium carboxidivorans P7]
gi|255508513|gb|EET84902.1| dimethyladenosine transferase [Clostridium carboxidivorans P7]
Length = 278
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 129/224 (57%), Gaps = 15/224 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + VL IV S+++ DD V+EIGPG G LT +LL+ +KKV+AIE+D
Sbjct: 17 FSKSLGQNFLIDNSVLQDIVDNSNVSKDDLVIEIGPGVGTLTKELLKKAKKVYAIELDSD 76
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQF------DLVVANIPYGISSPLVAKLVY 117
++ ILN + + ++ KDALK +F + VVAN+PY +++P+++KL+
Sbjct: 77 LIPILNEELKE---FNNFELVHKDALKVDFNELIGEEKSTKVVANLPYYVTTPIISKLLK 133
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
F S T+++QKE R+ A P E+ L++ V+ DVE V VS F+P PKVD
Sbjct: 134 ENYKFESLTIMIQKEVGERIAAKPSTKEYGALSILVQYYCDVEIVRKVSCDSFVPRPKVD 193
Query: 178 SSVV----IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
S V+ ++ PK ++ L + R+ F+ + KTL K
Sbjct: 194 SIVIKLTKLLEPKVKVKSKEL--FFKVVRSSFNMRRKTLWNGLK 235
>gi|147919487|ref|YP_686773.1| putative dimethyladenosine rRNA methyltransferase [Methanocella
arvoryzae MRE50]
gi|110622169|emb|CAJ37447.1| putative dimethyladenosine rRNA methyltransferase [Methanocella
arvoryzae MRE50]
Length = 260
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 79/181 (43%), Positives = 117/181 (64%), Gaps = 6/181 (3%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K K QH L +Q VL IV ++++ D+ VLEIG G GNLT L + ++ V+ IE+D R
Sbjct: 7 KRKDQHFLIDQAVLHRIVDAAALSSDEVVLEIGAGPGNLTRLLAQKARHVYTIEMDRRFA 66
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSA 125
E L S + VI +ALK EFP+FD VVAN+PY ISS + KL+ + F+ A
Sbjct: 67 EALEADFQGSN----VTVIHGNALKVEFPRFDKVVANLPYSISSDVTFKLL--SYPFKFA 120
Query: 126 TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP 185
L+ Q+EFA+R+ A G+ +++RL+V V+ ADV+ + +VS+R F P P+V+S+VV + P
Sbjct: 121 ILMYQREFAQRMAAKVGEEDYSRLSVTVQHFADVKLLFNVSRRAFNPQPEVESTVVKLTP 180
Query: 186 K 186
+
Sbjct: 181 R 181
>gi|227888939|ref|ZP_04006744.1| dimethyladenosine transferase [Lactobacillus johnsonii ATCC 33200]
gi|227850527|gb|EEJ60613.1| dimethyladenosine transferase [Lactobacillus johnsonii ATCC 33200]
Length = 294
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 86/234 (36%), Positives = 128/234 (54%), Gaps = 21/234 (8%)
Query: 3 FFHKSK--GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEI 60
F H K GQ+ L + + IV + I P D V+EIGPG G+LT +LL KV A E+
Sbjct: 21 FMHAKKNLGQNFLVDLPAIKGIVEAADIQPGDQVIEIGPGIGSLTEQLLLAGAKVLAYEV 80
Query: 61 DERMVEILN----RRAADSGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPYG 106
D+ + EILN ++ DR ++ KD LK F + DL +VAN+PY
Sbjct: 81 DQDLPEILNNELPQKIDGEELKDRFKLVMKDVLKANFVEDNDGFLDLSKSVNIVANLPYY 140
Query: 107 ISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVS 166
I++P++ L+ F S TL++QKE A RL+A P E+ L++ V+ +V +V
Sbjct: 141 ITTPIIFNLIKSDLDFSSLTLMMQKEVAERLVAKPKTKEYGPLSIAVQSRMNVRLAEEVK 200
Query: 167 KRDFLPCPKVDSSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTLGATFK 217
F+P PKVDS+VV++ P E PD+N ++ F + CF+++ KTL K
Sbjct: 201 STSFMPRPKVDSAVVVLTPLLEKPDIN--DYVFFDHVVKMCFAQRRKTLANNLK 252
>gi|104773499|ref|YP_618479.1| dimethyladenosine transferase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116513494|ref|YP_812400.1| dimethyladenosine transferase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|118600873|sp|Q1GBR1.1|RSMA_LACDA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|122275736|sp|Q04C60.1|RSMA_LACDB RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|103422580|emb|CAI97183.1| Dimethyladenosine transferase (16S rRNA dimethylase) [Lactobacillus
delbrueckii subsp. bulgaricus ATCC 11842]
gi|116092809|gb|ABJ57962.1| dimethyladenosine transferase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
Length = 296
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 126/232 (54%), Gaps = 17/232 (7%)
Query: 3 FFHKSK--GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEI 60
F H K GQ+ L + + IVR + I P D V+E+GPG G+LT +LL KV A E+
Sbjct: 21 FVHAKKNLGQNFLVDLDAVQGIVRAAGIEPGDQVVEVGPGIGSLTEQLLLAGGKVAAYEV 80
Query: 61 DERMVEILNRRAAD----SGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPYG 106
D+ + EIL + R +I KD LK +F FDL VVAN+PY
Sbjct: 81 DQSLPEILANELPEKVDGQDLDQRFKLIMKDVLKADFATDLAGFFDLSKPVKVVANLPYY 140
Query: 107 ISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVS 166
I++P++ L+ + F S TL++QKE A RL A PG + L++ V+ V+ ++V
Sbjct: 141 ITTPIIFNLLESSLDFTSLTLMMQKEVAERLAAQPGSKAYGPLSIAVQTQMSVDLALEVG 200
Query: 167 KRDFLPCPKVDSSVVIIRPKAEIPDV-NLDEWRAFTRTCFSKKNKTLGATFK 217
F+P PKVDS+VV++ P + DV + ++ + CF+++ KTL K
Sbjct: 201 HASFMPQPKVDSAVVVLTPLEKPADVGDRKQFNRVVKLCFAQRRKTLANNLK 252
>gi|422845053|ref|ZP_16891763.1| dimethyladenosine transferase [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
gi|325684673|gb|EGD26827.1| dimethyladenosine transferase [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
Length = 296
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 126/232 (54%), Gaps = 17/232 (7%)
Query: 3 FFHKSK--GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEI 60
F H K GQ+ L + + IVR + I P D V+E+GPG G+LT +LL KV A E+
Sbjct: 21 FVHAKKNLGQNFLVDLDAVQGIVRAAGIEPGDQVVEVGPGIGSLTEQLLLAGGKVAAYEV 80
Query: 61 DERMVEILNRRAAD----SGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPYG 106
D+ + EIL + R +I KD LK +F FDL VVAN+PY
Sbjct: 81 DQSLPEILANELPEKVDGQDLDQRFKLIMKDVLKADFATDLAGFFDLSKPVKVVANLPYY 140
Query: 107 ISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVS 166
I++P++ L+ + F S TL++QKE A RL A PG + L++ V+ V+ ++V
Sbjct: 141 ITTPIIFNLLESSLDFTSLTLMMQKEVAERLAAQPGSKAYGPLSIAVQTQMSVDLALEVG 200
Query: 167 KRDFLPCPKVDSSVVIIRPKAEIPDV-NLDEWRAFTRTCFSKKNKTLGATFK 217
F+P PKVDS+VV++ P + DV + ++ + CF+++ KTL K
Sbjct: 201 HASFMPQPKVDSAVVVLTPLEKPADVGDRKQFNRVVKLCFAQRRKTLANNLK 252
>gi|341581719|ref|YP_004762211.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Thermococcus sp. 4557]
gi|340809377|gb|AEK72534.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Thermococcus sp. 4557]
Length = 273
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/224 (37%), Positives = 132/224 (58%), Gaps = 11/224 (4%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQ+ L +++ V ++ +N +DTVLE+GPG G LT L + KV+AIE D R+VEIL
Sbjct: 21 GQNFLIVPDIIERNVERAELNGNDTVLEVGPGLGVLTDALSRHAGKVYAIEKDSRLVEIL 80
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
A+ + + + +I DALK EFP F+ +V+N+PY ISSP+ + + F A L+
Sbjct: 81 R---AEYDWPN-VEIIEGDALKVEFPAFNKIVSNLPYQISSPITFRFL--RYDFERAVLI 134
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q EFA+R++A PGD ++RL++ V+ A E V + + F P PKVDS+V+++ PK
Sbjct: 135 YQLEFAQRMVAEPGDKNYSRLSLMVRAKAYAELVERIGRGAFWPRPKVDSAVIVLEPKPR 194
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLSKQK 232
+ L+E R F + T+ A K+ +L LSK++
Sbjct: 195 DKRLELNE--DLVRALFQHRRSTVLAALKKSH---HMLGLSKEE 233
>gi|300812073|ref|ZP_07092521.1| dimethyladenosine transferase [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300496912|gb|EFK31986.1| dimethyladenosine transferase [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 296
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 126/232 (54%), Gaps = 17/232 (7%)
Query: 3 FFHKSK--GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEI 60
F H K GQ+ L + + IVR + I P D V+E+GPG G+LT +LL KV A E+
Sbjct: 21 FVHAKKNLGQNFLVDLDAVQGIVRAAGIEPGDQVVEVGPGIGSLTEQLLLAGGKVAAYEV 80
Query: 61 DERMVEILNRRAAD----SGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPYG 106
D+ + EIL + R +I KD LK +F FDL VVAN+PY
Sbjct: 81 DQSLPEILANELPEKVDGQDLDQRFKLIMKDVLKADFATDLAGFFDLGKPVKVVANLPYY 140
Query: 107 ISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVS 166
I++P++ L+ + F S TL++QKE A RL A PG + L++ V+ V+ ++V
Sbjct: 141 ITTPIIFNLLESSLDFTSLTLMMQKEVAERLAAQPGSKAYGPLSIAVQTQMSVDLALEVG 200
Query: 167 KRDFLPCPKVDSSVVIIRPKAEIPDV-NLDEWRAFTRTCFSKKNKTLGATFK 217
F+P PKVDS+VV++ P + DV + ++ + CF+++ KTL K
Sbjct: 201 HASFMPQPKVDSAVVVLTPLEKPADVGDRKQFNRVVKLCFAQRRKTLANNLK 252
>gi|238855589|ref|ZP_04645891.1| dimethyladenosine transferase [Lactobacillus jensenii 269-3]
gi|260664781|ref|ZP_05865632.1| dimethyladenosine transferase [Lactobacillus jensenii SJ-7A-US]
gi|238831806|gb|EEQ24141.1| dimethyladenosine transferase [Lactobacillus jensenii 269-3]
gi|260561264|gb|EEX27237.1| dimethyladenosine transferase [Lactobacillus jensenii SJ-7A-US]
Length = 294
Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 142/251 (56%), Gaps = 22/251 (8%)
Query: 3 FFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDE 62
F K+ GQ+ L + ++ I+ + I+ DD VLEIGPG G+LT ++L KV A EID+
Sbjct: 23 FAKKNLGQNFLISLNKINDILDAAEIDGDDQVLEIGPGIGSLTEQMLLRGAKVLAYEIDQ 82
Query: 63 RMVEILN----RRAADSGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPYGIS 108
+ EIL+ ++ D D ++ KD LK +F FDL VVAN+PY I+
Sbjct: 83 DLPEILHNELPQKIGDKYLDDVFKLVMKDILKADFKADIGNFFDLNKPVKVVANLPYYIT 142
Query: 109 SPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKR 168
+P++ L +F S TL++QKE A RL AS G+ E+ L + V+ V+ + V
Sbjct: 143 TPIIFALAKSDLAFESLTLMMQKEVAERLCASSGNKEYGPLTIFVQTQMSVKMAVMVDHT 202
Query: 169 DFLPCPKVDSSVVIIRPKAEIPDV-NLDEWRAFTRTCFSKKNKTLGATFK-------QKK 220
+F P PKVDS+VV+++P + DV + D + + CFS++ KTL K ++K
Sbjct: 203 NFNPQPKVDSAVVVLKPLVQKVDVGDTDNFDHVVKMCFSQRRKTLNNNLKSLVKDSEERK 262
Query: 221 KVIELLRLSKQ 231
K++++L L ++
Sbjct: 263 KLLQMLDLPEK 273
>gi|313228792|emb|CBY17943.1| unnamed protein product [Oikopleura dioica]
Length = 193
Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 101/152 (66%), Gaps = 1/152 (0%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+F GQHIL N +V+ S+V K+ + P DT+LEIGPGTGN+T+KLLE KKV A+E+D
Sbjct: 31 VFNTSGYGQHILKNPQVVQSMVEKAGVLPSDTILEIGPGTGNMTVKLLEKCKKVIALEVD 90
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
ERMV + +R + +L +I+KDALK E P FDLVVAN+PY ISSP+ KL+
Sbjct: 91 ERMVAEVQKRVMGTPLKHKLTIINKDALKAELPFFDLVVANLPYAISSPITFKLLLHRPM 150
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNV 153
FR A L+ E RR LAS G + +A+++
Sbjct: 151 FRVAVLMGVYE-ERRELASQGPLSRDLIAISI 181
>gi|418029917|ref|ZP_12668434.1| Methyltransferase [Lactobacillus delbrueckii subsp. bulgaricus CNCM
I-1632]
gi|354688380|gb|EHE88419.1| Methyltransferase [Lactobacillus delbrueckii subsp. bulgaricus CNCM
I-1632]
Length = 275
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/229 (36%), Positives = 125/229 (54%), Gaps = 19/229 (8%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K+ GQ+ L + + IVR + I P D V+E+GPG G+LT +LL KV A E+D+ +
Sbjct: 5 KNLGQNFLVDLDAVQGIVRAAGIEPGDQVVEVGPGIGSLTEQLLLAGGKVAAYEVDQSLP 64
Query: 66 EILN----RRAADSGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPYGISSPL 111
EIL + R +I KD LK +F FDL VVAN+PY I++P+
Sbjct: 65 EILANELPEKVDGQDLDQRFKLIMKDVLKADFATDLAGFFDLSKPVKVVANLPYYITTPI 124
Query: 112 VAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFL 171
+ L+ + F S TL++QKE A RL A PG + L++ V+ V+ ++V F+
Sbjct: 125 IFNLLESSLDFTSLTLMMQKEVAERLAAQPGSKAYGPLSIAVQTQMSVDLALEVGHASFM 184
Query: 172 PCPKVDSSVVIIRPKAEIPDVNLDEWRAFTRT---CFSKKNKTLGATFK 217
P PKVDS+VV++ P + DV + + F R CF+++ KTL K
Sbjct: 185 PQPKVDSAVVVLTPLEKPADVG--DRKQFNRVVKLCFAQRRKTLANNLK 231
>gi|418035193|ref|ZP_12673651.1| Methyltransferase [Lactobacillus delbrueckii subsp. bulgaricus CNCM
I-1519]
gi|354690611|gb|EHE90555.1| Methyltransferase [Lactobacillus delbrueckii subsp. bulgaricus CNCM
I-1519]
Length = 275
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/229 (36%), Positives = 125/229 (54%), Gaps = 19/229 (8%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K+ GQ+ L + + IVR + I P D V+E+GPG G+LT +LL KV A E+D+ +
Sbjct: 5 KNLGQNFLVDLDAVQGIVRAAGIEPGDQVVEVGPGIGSLTEQLLLAGGKVAAYEVDQSLP 64
Query: 66 EILN----RRAADSGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPYGISSPL 111
EIL + R +I KD LK +F FDL VVAN+PY I++P+
Sbjct: 65 EILANELPEKVDGQDLDQRFKLIMKDVLKADFATDLAGFFDLSKPVKVVANLPYYITTPI 124
Query: 112 VAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFL 171
+ L+ + F S TL++QKE A RL A PG + L++ V+ V+ ++V F+
Sbjct: 125 IFNLLESSLDFTSLTLMMQKEVAERLAAQPGSKAYGPLSIAVQTQMSVDLALEVGHASFM 184
Query: 172 PCPKVDSSVVIIRPKAEIPDVNLDEWRAFTRT---CFSKKNKTLGATFK 217
P PKVDS+VV++ P + DV + + F R CF+++ KTL K
Sbjct: 185 PQPKVDSAVVVLTPLEKPADVG--DRKQFNRVVKLCFAQRRKTLANNLK 231
>gi|410671970|ref|YP_006924341.1| dimethyladenosine transferase [Methanolobus psychrophilus R15]
gi|409171098|gb|AFV24973.1| dimethyladenosine transferase [Methanolobus psychrophilus R15]
Length = 270
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 129/215 (60%), Gaps = 6/215 (2%)
Query: 10 QHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILN 69
QH L ++R+LD IV + I P +T+LEIG G GNLT +L++ + KV AIE D +V++L
Sbjct: 18 QHFLVDERILDRIVDAADIRPHETILEIGAGIGNLTERLMKRAGKVIAIERDPVLVDVLL 77
Query: 70 RRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLL 129
R G +D+L +I+ D L+ EFP FD VV+N+PY ISS + KL F L+
Sbjct: 78 DRF---GENDKLEIIAGDVLEVEFPPFDKVVSNLPYSISSEITFKLF--RHEFELGILMY 132
Query: 130 QKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAEI 189
Q EFA+R++A +++RL+VN AD +M++ +R F P P+V S+VV ++P+
Sbjct: 133 QYEFAQRMVAHANSGDYSRLSVNTYYFADTSIIMEIPRRAFSPPPEVLSAVVRVKPRPSP 192
Query: 190 PDVNLDEWRA-FTRTCFSKKNKTLGATFKQKKKVI 223
V+ ++ F F ++ K + + + K+++
Sbjct: 193 FKVDDRKYYLDFVTAVFGQRRKKIRNSIIRNKQLL 227
>gi|386001511|ref|YP_005919810.1| putative ribosomal RNA small subunit methyltransferase A
[Methanosaeta harundinacea 6Ac]
gi|357209567|gb|AET64187.1| putative ribosomal RNA small subunit methyltransferase A
[Methanosaeta harundinacea 6Ac]
Length = 244
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/207 (37%), Positives = 121/207 (58%), Gaps = 8/207 (3%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQH L ++RVL I +S+ D VLE+GPGTGNLT L E + V+AIE+D +
Sbjct: 2 KKLGQHFLIDRRVLSRIGDYASLGRSDAVLEVGPGTGNLTRVLSERAGSVYAIEVDPALA 61
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSA 125
L G + +++I DAL+ P+++ +V+N+PY ISS + +L+ + F A
Sbjct: 62 SSLE------GRFENVSIIRGDALRVPLPEYNKIVSNLPYQISSKITFRLL--ARPFDLA 113
Query: 126 TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP 185
L+ Q+EFA R++A PG E RL++NV A+ E + V + F P P+V+S++V +RP
Sbjct: 114 VLMYQREFAERMVAPPGTRERGRLSLNVAFWAEAEVLETVPRGAFSPRPQVESAIVRLRP 173
Query: 186 KAEIPDVNLDEWRAFTRTCFSKKNKTL 212
+ V+ + A TR FS + K +
Sbjct: 174 RKTPAPVDWAGFEALTRGLFSMRRKKI 200
>gi|299143369|ref|ZP_07036449.1| dimethyladenosine transferase [Peptoniphilus sp. oral taxon 386
str. F0131]
gi|298517854|gb|EFI41593.1| dimethyladenosine transferase [Peptoniphilus sp. oral taxon 386
str. F0131]
Length = 288
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 130/218 (59%), Gaps = 13/218 (5%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + ++ IV + I+ +D VLEIGPG G LT +L +KKV +IEID
Sbjct: 21 FSKSLGQNFLIDGNIVRKIVDSAEISSNDNVLEIGPGVGTLTEELCLRAKKVVSIEIDNH 80
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL---------VVANIPYGISSPLVAK 114
+ E+L +S ++ + +I D LKT+ +F VVAN+PY +++P+++K
Sbjct: 81 LKELL----KESLPYENVKIIFNDVLKTDLKKFTEQEFGGETFKVVANLPYYVTTPIISK 136
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
L+ + S T+++QKE A R ASP ++ L+V ++ +DV++ V K F+P P
Sbjct: 137 LIEEDLNIESITVMIQKEVANRFSASPSTKDYGSLSVFIQFYSDVKYEFTVPKNVFMPKP 196
Query: 175 KVDSSVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTL 212
VDS+VV ++ K ++PD++ D+ R FSK+ KTL
Sbjct: 197 NVDSAVVNLKIKKDLPDIDRDKLFKVVRAAFSKRRKTL 234
>gi|313123062|ref|YP_004033321.1| ribosomal RNA small subunit methyltransferase a [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
gi|312279625|gb|ADQ60344.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
Length = 296
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 125/232 (53%), Gaps = 17/232 (7%)
Query: 3 FFHKSK--GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEI 60
F H K GQ+ L + + IVR + I P D V+E+GPG G+LT +LL KV A E+
Sbjct: 21 FVHAKKNLGQNFLVDLDAVQGIVRAAGIEPGDQVVEVGPGIGSLTEQLLLAGGKVAAYEV 80
Query: 61 DERMVEILNRRAAD----SGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPYG 106
D + EIL + R +I KD LK +F FDL VVAN+PY
Sbjct: 81 DHSLPEILANELPEKVDGQDLDQRFKLIMKDVLKADFATDLAGFFDLSKPVKVVANLPYY 140
Query: 107 ISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVS 166
I++P++ L+ + F S TL++QKE A RL A PG + L++ V+ V+ ++V
Sbjct: 141 ITTPIIFNLLESSLDFTSLTLMMQKEVAERLAAQPGSKAYGPLSIAVQTQMSVDLALEVG 200
Query: 167 KRDFLPCPKVDSSVVIIRPKAEIPDV-NLDEWRAFTRTCFSKKNKTLGATFK 217
F+P PKVDS+VV++ P + DV + ++ + CF+++ KTL K
Sbjct: 201 HASFMPQPKVDSAVVVLTPLEKPADVGDRKQFNRVVKLCFAQRRKTLANNLK 252
>gi|409722690|ref|ZP_11270110.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halococcus hamelinensis 100A6]
gi|448723183|ref|ZP_21705708.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halococcus hamelinensis 100A6]
gi|445788138|gb|EMA38860.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halococcus hamelinensis 100A6]
Length = 284
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 121/207 (58%), Gaps = 3/207 (1%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
+++ QH L + RVLD + ++ VLE+G GTG LT +LL +++V A+E D R+V
Sbjct: 26 RNQDQHFLVDDRVLDRLPEYATAFDTSHVLEVGAGTGGLTDRLLADAERVTAVERDVRLV 85
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSA 125
E L A + RL+V++ DAL + P+F V+N+PYG SS L+ +L+ R
Sbjct: 86 EFLREEFAGAVDAGRLDVVAGDALDVDLPEFSASVSNLPYGSSSELLFRLL---PRERPL 142
Query: 126 TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP 185
+++Q EFA R++A PG SE+ RL+V AD E V V + F P P V+S+VV P
Sbjct: 143 VVMVQAEFAERMVADPGSSEYGRLSVTAGHYADAEIVERVPREAFSPPPAVESAVVRTTP 202
Query: 186 KAEIPDVNLDEWRAFTRTCFSKKNKTL 212
+ DV D + AF R F+++ KT+
Sbjct: 203 RDPDYDVPEDAFFAFVRGVFTQRRKTM 229
>gi|15828486|ref|NP_325846.1| dimethyladenosine transferase [Mycoplasma pulmonis UAB CTIP]
gi|27151595|sp|Q98RJ3.1|RSMA_MYCPU RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|14089428|emb|CAC13188.1| DIMETHYLADENOSINE TRANSFERASE (S-ADENOSYLMETHIONINE-6-N',
N'-ADENOSYL(RRNA) DIMETHYLTRANSFERASE)(16S RRNA
DIMETHYLASE)(HIGH LEVEL KASUGAMYCIN RESISTANCE PROTEIN
KSGA) (KASUGAMYCIN DIMETHYLTRANSFERASE) [Mycoplasma
pulmonis]
Length = 252
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/226 (39%), Positives = 136/226 (60%), Gaps = 12/226 (5%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQ+ L +Q +++ IV S + + ++EIGPG G LT L++ + KV A EID+ MV IL
Sbjct: 8 GQNFLIDQNIINKIVDSSEV-ENRNIIEIGPGKGALTKILVKKANKVLAYEIDQDMVNIL 66
Query: 69 NRRAADSGFHDRLNVISKDALKTEF--PQFDLVVANIPYGISSPLVAKLVYGTKSFRSAT 126
N++ + F +I+KD LK EF Q +VANIPY I+S ++ K++ + F AT
Sbjct: 67 NQQISSKNFV----LINKDFLKEEFDKSQNYNIVANIPYYITSDIIFKIIENHQIFDQAT 122
Query: 127 LLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPK 186
L++QKE A R+LA DSEF++L+++V+ DV + DVSK F P PKVDS+V+ + K
Sbjct: 123 LMVQKEVALRILAKQNDSEFSKLSLSVQFFFDVFLICDVSKNSFRPIPKVDSAVIKLVKK 182
Query: 187 AEIPDVNL-DEWRAFTRTCFSKKNKTLGATFK---QKKKVIELLRL 228
D +L E+ F + FS + KTL K ++K+++ L
Sbjct: 183 KN-KDFSLWKEYFEFLKIAFSSRRKTLLNNLKYFFNEQKILKFFEL 227
>gi|288869605|ref|ZP_05975193.2| dimethyladenosine transferase [Methanobrevibacter smithii DSM 2374]
gi|288860560|gb|EFC92858.1| dimethyladenosine transferase [Methanobrevibacter smithii DSM 2374]
Length = 306
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 127/222 (57%), Gaps = 16/222 (7%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I +K+ GQ+ L ++ D I++ ++ DD VLEIGPG G LT++L + KKV AIE D
Sbjct: 26 IKLNKNLGQNYLIDRNKRDQIIQFGNLTKDDVVLEIGPGIGTLTIELAKRVKKVIAIEQD 85
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
+ +IL R D +++I+ DAL EFP+FD +++N+PY ISSP+ K +
Sbjct: 86 SNICQILENRLKKENI-DNVDLINDDALNVEFPKFDKIISNLPYQISSPITFKFL--NYD 142
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
F+ A L+ QKEFA R+ G +++RL+ + DV+ + VS F+P PKVDS+VV
Sbjct: 143 FQLAILMYQKEFASRMNGKVGSKDYSRLSAMLYFKCDVDLLTGVSAESFIPKPKVDSTVV 202
Query: 182 IIRPK-----AEIPDVNLDE--------WRAFTRTCFSKKNK 210
+ PK ++ +N++E + F + F +NK
Sbjct: 203 RLTPKLPELNGQLKHLNINEINEKDFKTYSKFVKALFQHRNK 244
>gi|115400783|ref|XP_001215980.1| hypothetical protein ATEG_06802 [Aspergillus terreus NIH2624]
gi|114191646|gb|EAU33346.1| hypothetical protein ATEG_06802 [Aspergillus terreus NIH2624]
Length = 287
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 101/163 (61%)
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M + +R + RL+VI D +KTE P FD+ ++N PY ISSPL KL+ T + R
Sbjct: 1 MAAEVTKRVQGTPAQKRLDVILGDFMKTELPYFDVCISNTPYQISSPLTFKLLATTPAPR 60
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
L+ Q+EFA RL A PGD ++RL+VN ++ A ++ +M V K +F P P VDSSVV +
Sbjct: 61 VCILMFQREFALRLFAKPGDKLYSRLSVNAQMWAKIDHIMKVGKNNFKPPPLVDSSVVRL 120
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
PK P +N +EW R CF +KNKT+ ++F K V++LL
Sbjct: 121 VPKNPRPQINYEEWDGLLRICFVRKNKTIRSSFLGKHTVMDLL 163
>gi|294495698|ref|YP_003542191.1| dimethyladenosine transferase [Methanohalophilus mahii DSM 5219]
gi|292666697|gb|ADE36546.1| dimethyladenosine transferase [Methanohalophilus mahii DSM 5219]
Length = 229
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 120/214 (56%), Gaps = 19/214 (8%)
Query: 10 QHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILN 69
QH L N+ +LDSI + + DD VLEIG G GNLT +L+ + +V IE D R+V +L
Sbjct: 18 QHFLVNEPILDSIAEAADLQIDDVVLEIGGGIGNLTERLVSRAGRVIVIERDSRLVAVLQ 77
Query: 70 RRAADSGFHD--RLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATL 127
R FH+ +++I DA+K E P F+ VVAN+PY ISSP+ +L+ F L
Sbjct: 78 DR-----FHNVSNIDIIEGDAMKVELPTFNKVVANLPYSISSPITFRLL--NHGFEKGIL 130
Query: 128 LLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKA 187
+ Q EFARR++ +PG + RL+V+ + ADV + +S F P PKV S+VV + P+
Sbjct: 131 MYQYEFARRMVEAPGSKNYGRLSVDTQYFADVRLLRKISPSAFTPAPKVWSAVVEVVPRP 190
Query: 188 EIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKK 221
P + + F R + A F Q++K
Sbjct: 191 --PAFEVKNEQLFFR--------VVEAAFGQRRK 214
>gi|27151572|sp|Q8PU18.2|RSMA_METMA RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
Length = 271
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/205 (40%), Positives = 124/205 (60%), Gaps = 8/205 (3%)
Query: 10 QHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILN 69
QH L + LD IV + ++P DTVLEIG G GNLT +L +KKV A+E+D +V +L+
Sbjct: 18 QHFLIDAGYLDRIVAAAELSPQDTVLEIGAGIGNLTERLARRAKKVIAVELDPALVSVLH 77
Query: 70 RRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLL 129
R D+ + + +I+ DALK +FP+FD VV+N+PY ISS + KL+ F+ L+
Sbjct: 78 DR-FDAA--ENIEIIAGDALKVDFPEFDKVVSNLPYSISSEITFKLL--RHKFKLGVLMY 132
Query: 130 QKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAEI 189
Q EFA R+++ PG +++RL ++ AD VM V K F P P+VDS+V+ + P+
Sbjct: 133 QYEFAVRMVSPPGCKDYSRLTIDTCYFADASIVMKVPKGAFQPAPEVDSAVIKLIPRPAP 192
Query: 190 PDVNLDE--WRAFTRTCFSKKNKTL 212
+V DE + F FS++ K L
Sbjct: 193 FEVR-DETFFLQFVAAVFSQRRKKL 216
>gi|403387590|ref|ZP_10929647.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Clostridium sp. JC122]
Length = 283
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 132/224 (58%), Gaps = 13/224 (5%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ LT+ VL+ IV +++ DD ++EIGPG G LT++LL+ +K+V +IE+D+R
Sbjct: 17 FAKSLGQNFLTDDTVLEDIVSGAAVCKDDYIIEIGPGVGTLTVELLDRAKRVTSIELDDR 76
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFD------LVVANIPYGISSPLVAKLVY 117
++ IL D ++ N+I KDALK + + VVAN+PY +++P++A L+
Sbjct: 77 LIPILTEELKD---YETFNLIHKDALKVNYKELIGDEKSVKVVANLPYYVTTPIIANLLN 133
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
G +F+S T+++QKE A R+ A P ++ ++ V+ D + V F+P PKVD
Sbjct: 134 GEYNFKSLTIMIQKEVAERIDAQPSTKDYGAFSLLVQYYCDTAIIRRVPPSCFIPSPKVD 193
Query: 178 SSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTLGATFKQ 218
S+VI K E P +++ + + F R F+ + KTL K
Sbjct: 194 -SIVIRLDKLEKPRISVKDEKLFFNVIRQSFNMRRKTLWNGMKN 236
>gi|222445676|ref|ZP_03608191.1| hypothetical protein METSMIALI_01317 [Methanobrevibacter smithii
DSM 2375]
gi|222435241|gb|EEE42406.1| dimethyladenosine transferase [Methanobrevibacter smithii DSM 2375]
Length = 306
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 126/222 (56%), Gaps = 16/222 (7%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I +K+ GQ+ L ++ D I++ ++ DD VLEIGPG G LT++L + KKV AIE D
Sbjct: 26 IKLNKNLGQNYLIDRNKRDQIIQFGNLTKDDVVLEIGPGIGTLTIELAKRVKKVIAIEQD 85
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
+ +IL R D + +I+ DAL EFP+FD +++N+PY ISSP+ K +
Sbjct: 86 SNICQILENRLKKENI-DNVELINDDALNVEFPKFDKIISNLPYQISSPITFKFL--NYD 142
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
F+ A L+ QKEFA R+ G +++RL+ + DV+ + VS F+P PKVDS+VV
Sbjct: 143 FQLAILMYQKEFASRMNGKVGSKDYSRLSAMLYFKCDVDLLTGVSAESFIPKPKVDSTVV 202
Query: 182 IIRPK-----AEIPDVNLDE--------WRAFTRTCFSKKNK 210
+ PK ++ +N++E + F + F +NK
Sbjct: 203 RLTPKLPELNGQLKHLNINEINEKDFKTYSKFVKALFQHRNK 244
>gi|365905539|ref|ZP_09443298.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Lactobacillus versmoldensis KCTC 3814]
Length = 296
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 132/220 (60%), Gaps = 17/220 (7%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS GQ+ LT+++VLD IV S + D+ +EIGPG G LT KL +V++KV + EIDE ++
Sbjct: 27 KSLGQNFLTSEKVLDDIVDASQLKQDEIAIEIGPGIGALTEKLAQVAEKVFSFEIDESLM 86
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQF----------DLVVANIPYGISSPLVAKL 115
IL +D +D + V ++D LK + QF VVAN+PY I++P++ L
Sbjct: 87 PILADTLSD---YDNIEVFNQDILKVDLDQFVKDHGIEGKTIKVVANLPYYITTPIMLNL 143
Query: 116 VYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPK 175
+ F+S L++QKE A R+ A+PG ++ L + V+ + + E V K F+P PK
Sbjct: 144 INSDYPFQSLVLMMQKEVAERITATPGHRQYGSLTIGVQTLMETEIARIVGKNSFVPRPK 203
Query: 176 VDSSVVIIRPKAEIPDVNLDEWRAFT---RTCFSKKNKTL 212
VDS+VV+++ + + P +++ + F R+ F++K K+L
Sbjct: 204 VDSAVVVLK-RLDKPYQGINDPKFFNTVIRSSFAQKRKSL 242
>gi|385815093|ref|YP_005851484.1| Dimethyladenosine transferase [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
gi|325125130|gb|ADY84460.1| Dimethyladenosine transferase [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 296
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 126/232 (54%), Gaps = 17/232 (7%)
Query: 3 FFHKSK--GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEI 60
F H K GQ+ L + + IVR + I P D V+E+GPG G+LT +LL KV A E+
Sbjct: 21 FVHAKKNLGQNFLVDLDAVRGIVRAAGIEPGDQVVEVGPGIGSLTEQLLLAGGKVTAYEV 80
Query: 61 DERMVEILNRRAAD----SGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPYG 106
D+ + EIL + R +I KD LK +F FDL VVAN+PY
Sbjct: 81 DQSLPEILANELPEKVDGQDLDQRFKLIMKDVLKADFATDLAGFFDLSKPVKVVANLPYY 140
Query: 107 ISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVS 166
I++P++ L+ + F S TL++QKE A RL A PG + L++ V+ V+ ++V
Sbjct: 141 ITTPIIFNLLEYSLDFTSLTLMMQKEVAERLAAQPGSKAYGPLSIAVQTQMSVDLALEVG 200
Query: 167 KRDFLPCPKVDSSVVIIRPKAEIPDV-NLDEWRAFTRTCFSKKNKTLGATFK 217
F+P PKVDS+VV++ P + DV + ++ + CF+++ KTL K
Sbjct: 201 HASFMPQPKVDSAVVVLTPLEKPADVGDRKQFNRVVKLCFAQRRKTLANNLK 252
>gi|148643434|ref|YP_001273947.1| dimethyladenosine transferase [Methanobrevibacter smithii ATCC
35061]
gi|148552451|gb|ABQ87579.1| dimethyladenosine transferase, KsgA [Methanobrevibacter smithii
ATCC 35061]
Length = 303
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 126/222 (56%), Gaps = 16/222 (7%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I +K+ GQ+ L ++ D I++ ++ DD VLEIGPG G LT++L + KKV AIE D
Sbjct: 23 IKLNKNLGQNYLIDRNKRDQIIQFGNLTKDDVVLEIGPGIGTLTIELAKRVKKVIAIEQD 82
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
+ +IL R D + +I+ DAL EFP+FD +++N+PY ISSP+ K +
Sbjct: 83 SNICQILENRLKKENI-DNVELINDDALNVEFPKFDKIISNLPYQISSPITFKFL--NYD 139
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
F+ A L+ QKEFA R+ G +++RL+ + DV+ + VS F+P PKVDS+VV
Sbjct: 140 FQLAILMYQKEFASRMNGKVGSKDYSRLSAMLYFKCDVDLLTGVSAESFIPKPKVDSTVV 199
Query: 182 IIRPK-----AEIPDVNLDE--------WRAFTRTCFSKKNK 210
+ PK ++ +N++E + F + F +NK
Sbjct: 200 RLTPKLPELNGQLKHLNINEINEKDFKTYSKFVKALFQHRNK 241
>gi|124025654|ref|YP_001014770.1| dimethyladenosine transferase [Prochlorococcus marinus str. NATL1A]
gi|166221688|sp|A2C1Z5.1|RSMA_PROM1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|123960722|gb|ABM75505.1| putative rRNA (adenine-N6,N6)-dimethyltransferase [Prochlorococcus
marinus str. NATL1A]
Length = 291
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 118/192 (61%), Gaps = 9/192 (4%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKK-VHAIEIDERMVEI 67
GQH L +Q VLD IV+ + +NP+D VLE+GPG G LT KL+E K + AIE+D +V
Sbjct: 19 GQHWLKDQGVLDQIVKAAELNPEDCVLEVGPGKGALTEKLIESQAKFIQAIELDRDLVIG 78
Query: 68 LNRR-AADSGFHDRLNVISKDALKTEFP-QFDLVVANIPYGISSPLVAKLVYGTK----- 120
L +R + F R I L E + VVANIPY I+ PL+ +L+ +
Sbjct: 79 LKKRFNHQNKFSLREGDILSAPLDAENGVTINKVVANIPYNITGPLLKRLIGELRKAPEN 138
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
SF + LL+QKE A+RLLA PG+S F+ L+V V+L+A + V DV + F P PKVDS V
Sbjct: 139 SFETLVLLMQKEVAQRLLARPGNSNFSALSVRVQLLAKCQDVCDVPSKCFQPAPKVDSKV 198
Query: 181 VIIRPKAEI-PD 191
V+I+P A I PD
Sbjct: 199 VMIKPFASIDPD 210
>gi|295692081|ref|YP_003600691.1| dimethyladenosine transferase [Lactobacillus crispatus ST1]
gi|295030187|emb|CBL49666.1| Dimethyladenosine transferase [Lactobacillus crispatus ST1]
Length = 294
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 126/233 (54%), Gaps = 18/233 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+F K+K GQ+ L +Q + IV + I DD V+EIGPG G+LT +LL KV A E
Sbjct: 20 YFVKAKKNLGQNFLVDQTAILGIVEAAGIKKDDQVIEIGPGIGSLTEQLLLAGAKVFAYE 79
Query: 60 IDERMVEILN----RRAADSGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPY 105
+D+ + IL ++ D R ++ KD LK F + FD VVAN+PY
Sbjct: 80 VDDSLPTILQNELPKKIDDQPLASRFKILLKDVLKANFKEDIGDFFDFTKPIKVVANLPY 139
Query: 106 GISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDV 165
I++P++ L F S TL++QKE A RL A PG ++ L ++V+ V+ + V
Sbjct: 140 YITTPIIFALAESDLHFTSLTLMMQKEVAERLEAQPGSKDYGPLTISVQTEMKVKLALQV 199
Query: 166 SKRDFLPCPKVDSSVVIIRPKAEIPDV-NLDEWRAFTRTCFSKKNKTLGATFK 217
+ F+P PKVDSSVV++ P E P + + + + CFS++ KTL K
Sbjct: 200 GRNSFMPRPKVDSSVVVLTPLKEKPAIEDRKHFIWVVKMCFSQRRKTLNNNLK 252
>gi|242398592|ref|YP_002994016.1| Probable dimethyladenosine transferase [Thermococcus sibiricus MM
739]
gi|259494260|sp|C6A222.1|RSMA_THESM RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|242264985|gb|ACS89667.1| Probable dimethyladenosine transferase [Thermococcus sibiricus MM
739]
Length = 273
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/219 (36%), Positives = 127/219 (57%), Gaps = 8/219 (3%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQ+ L V+ V ++ I +T+LEIGPG G LT +L + + KV+AIE D R++EIL
Sbjct: 21 GQNFLIVGDVIKREVERAEIKNSETILEIGPGLGVLTDELAKRAGKVYAIEKDSRIIEIL 80
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
+ S + ++ DALK +FP+F+ VV+N+PY ISSP+ KL+ F A L+
Sbjct: 81 KKEYNWSN----VEIMQGDALKIKFPEFNKVVSNLPYQISSPITFKLL--KYDFERAVLI 134
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q EFA+R++A PGD ++RL+V V+ +V+ V + + F P PKVDS+V+++ PK +
Sbjct: 135 YQLEFAQRMVAKPGDKNYSRLSVMVQAKVNVDLVERIGRGAFYPKPKVDSAVIVMEPKPK 194
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLR 227
+ L+E + F + K K ++ L R
Sbjct: 195 DEQIELNE--NLVKALFQHRRKLASKALKDSYHMLGLTR 231
>gi|20090300|ref|NP_616375.1| dimethyladenosine transferase [Methanosarcina acetivorans C2A]
gi|27151576|sp|Q8TQU8.1|RSMA_METAC RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|19915300|gb|AAM04855.1| dimethyladenosine rRNA methyltransferase [Methanosarcina
acetivorans C2A]
Length = 269
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 122/211 (57%), Gaps = 20/211 (9%)
Query: 10 QHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILN 69
QH L + LD IV + ++P DT+LEIG G GNLT +L +KKV A+E+D +V +L
Sbjct: 18 QHFLIDIGYLDRIVVAAELSPQDTILEIGAGIGNLTERLARRAKKVIAVELDPALVSVL- 76
Query: 70 RRAADSGFHDRLN------VISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
HDR + VI+ DALK +FP+FD VV+N+PY ISS + KL+ F+
Sbjct: 77 --------HDRFDKVENIEVIAGDALKVDFPEFDKVVSNLPYSISSEITFKLL--RYKFK 126
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
L+ Q EFA R+++ PG +++RL V+ AD +M V K F P P+VDS+VV +
Sbjct: 127 LGILMYQYEFAARMVSPPGRKDYSRLTVDTYYFADASILMKVPKGAFQPAPEVDSAVVKL 186
Query: 184 RPKAEIPDVNLDE--WRAFTRTCFSKKNKTL 212
P+ +V DE + F FS++ K L
Sbjct: 187 VPRPSPFEVR-DEAFFLEFVAAVFSQRRKKL 216
>gi|191639502|ref|YP_001988668.1| dimethyladenosine transferase [Lactobacillus casei BL23]
gi|409998367|ref|YP_006752768.1| ribosomal RNA small subunit methyltransferase A [Lactobacillus
casei W56]
gi|190713804|emb|CAQ67810.1| Dimethyladenosine transferase (S-adenosylmethionine-6-N ,
N-adenosyl(rRNA) dimethyltransferase) (16S rRNA
dimethylase) (High level kasugamycin resistance protein
ksgA) (Kasugamycin dimethyltransferase) [Lactobacillus
casei BL23]
gi|406359379|emb|CCK23649.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
casei W56]
Length = 302
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 129/224 (57%), Gaps = 19/224 (8%)
Query: 4 FH--KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
FH K GQ+ LT+ ++L IV + + P+D V+EIGPG G LT L + + +V A+EID
Sbjct: 26 FHMRKGLGQNFLTDSKILQKIVTAADLTPEDDVIEIGPGIGALTQFLADSAHQVVALEID 85
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEF-----PQFD-----LVVANIPYGISSPL 111
+R++ IL+ AD + V+++D LKT+ FD VVAN+PY I++P+
Sbjct: 86 DRLLPILDETLAD---YPNATVVNEDVLKTDLGALVAEHFDGKHTLKVVANLPYYITTPI 142
Query: 112 VAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFL 171
+ L+ S T+++QKE A RL A+PG E+ L++ V+LVA V VS+ F+
Sbjct: 143 LLHLLRAQLPLHSMTVMMQKEVAERLSATPGSKEYGSLSIAVQLVASVATAFTVSRHAFV 202
Query: 172 PCPKVDSSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTL 212
P P VDS++V + + E P L + +F R F+ + KTL
Sbjct: 203 PAPNVDSAIVTLTQRTE-PLAALTDPASFDRLVRGAFASRRKTL 245
>gi|440779977|ref|ZP_20958565.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Clostridium pasteurianum DSM 525]
gi|440221653|gb|ELP60857.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Clostridium pasteurianum DSM 525]
Length = 280
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 134/237 (56%), Gaps = 20/237 (8%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + VL IV + ++ +D V+EIGPG G LT KLL +K V AIE+D
Sbjct: 17 FTKSLGQNFLMDNEVLKDIVEGAEVSKEDFVIEIGPGVGTLTRKLLNAAKSVCAIELDSD 76
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL------VVANIPYGISSPLVAKLVY 117
++ IL + D +D ++ KDALK +F + +VAN+PY +++P+++KL+
Sbjct: 77 LLPILEQELKD---YDNFMLVHKDALKVDFNEITAREKSVKLVANLPYYVTTPIISKLLT 133
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
G F+S T+++QKE A R+ A P E+ L++ V+ D + + VS F+P PKV+
Sbjct: 134 GGYVFKSLTIMIQKEVAERIAAKPNCKEYGALSLLVQYYCDTKIIRKVSPESFIPRPKVE 193
Query: 178 SSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTLGATFKQKKKVIELLRLSKQ 231
S V+ + +E P V + + F R F+ + KTL KQ L+LSK+
Sbjct: 194 SIVIRLDRLSE-PRVKVKSEKLFFTIIRNAFNMRRKTLWNALKQ-------LKLSKE 242
>gi|239630423|ref|ZP_04673454.1| dimethyladenosine transferase dimethyltransferase [Lactobacillus
paracasei subsp. paracasei 8700:2]
gi|301067575|ref|YP_003789598.1| dimethyladenosine transferase (rRNA methylation) [Lactobacillus
casei str. Zhang]
gi|385821272|ref|YP_005857659.1| Dimethyladenosine transferase [Lactobacillus casei LC2W]
gi|385824464|ref|YP_005860806.1| Dimethyladenosine transferase [Lactobacillus casei BD-II]
gi|417981761|ref|ZP_12622425.1| dimethyladenosine transferase [Lactobacillus casei 12A]
gi|417984584|ref|ZP_12625203.1| dimethyladenosine transferase [Lactobacillus casei 21/1]
gi|417997317|ref|ZP_12637576.1| dimethyladenosine transferase [Lactobacillus casei M36]
gi|418011963|ref|ZP_12651709.1| dimethyladenosine transferase [Lactobacillus casei Lc-10]
gi|418013041|ref|ZP_12652703.1| dimethyladenosine transferase [Lactobacillus casei Lpc-37]
gi|239526706|gb|EEQ65707.1| dimethyladenosine transferase dimethyltransferase [Lactobacillus
paracasei subsp. paracasei 8700:2]
gi|300439982|gb|ADK19748.1| Dimethyladenosine transferase (rRNA methylation) [Lactobacillus
casei str. Zhang]
gi|327383599|gb|AEA55075.1| Dimethyladenosine transferase [Lactobacillus casei LC2W]
gi|327386791|gb|AEA58265.1| Dimethyladenosine transferase [Lactobacillus casei BD-II]
gi|410521164|gb|EKP96129.1| dimethyladenosine transferase [Lactobacillus casei 12A]
gi|410524423|gb|EKP99332.1| dimethyladenosine transferase [Lactobacillus casei 21/1]
gi|410533077|gb|EKQ07765.1| dimethyladenosine transferase [Lactobacillus casei M36]
gi|410551212|gb|EKQ25280.1| dimethyladenosine transferase [Lactobacillus casei Lc-10]
gi|410556238|gb|EKQ30151.1| dimethyladenosine transferase [Lactobacillus casei Lpc-37]
Length = 298
Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 129/224 (57%), Gaps = 19/224 (8%)
Query: 4 FH--KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
FH K GQ+ LT+ ++L IV + + P+D V+EIGPG G LT L + + +V A+EID
Sbjct: 22 FHMRKGLGQNFLTDSKILQKIVTAADLTPEDDVIEIGPGIGALTQFLADSAHQVVALEID 81
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEF-----PQFDL-----VVANIPYGISSPL 111
+R++ IL+ AD + V+++D LKT+ FD VVAN+PY I++P+
Sbjct: 82 DRLLPILDETLAD---YPNATVVNEDVLKTDLGALVAEHFDGKHTLKVVANLPYYITTPI 138
Query: 112 VAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFL 171
+ L+ S T+++QKE A RL A+PG E+ L++ V+LVA V VS+ F+
Sbjct: 139 LLHLLRAQLPLHSMTVMMQKEVAERLSATPGSKEYGSLSIAVQLVASVATAFTVSRHAFV 198
Query: 172 PCPKVDSSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTL 212
P P VDS++V + + E P L + +F R F+ + KTL
Sbjct: 199 PAPNVDSAIVTLTQRTE-PLAALTDPASFDRLVRGAFASRRKTL 241
>gi|448728187|ref|ZP_21710518.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halococcus saccharolyticus DSM 5350]
gi|445797405|gb|EMA47880.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halococcus saccharolyticus DSM 5350]
Length = 295
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 128/222 (57%), Gaps = 7/222 (3%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
+++ QH L + RVLD + + VLEIG GTG LT +LL+ + +V AIE D R+
Sbjct: 27 RNQDQHFLVDDRVLDRLPTYAEAFDTSHVLEIGAGTGALTDRLLDTADRVTAIERDARLA 86
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSA 125
+ L AD+ RL+V+ +AL E P+F + V+N+PYG+SS ++ +L+ + R
Sbjct: 87 DFLREEFADACADGRLDVVEGNALSLEIPEFSVSVSNLPYGVSSEVLFRLL---PAKRPL 143
Query: 126 TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP 185
+++Q+EFA R++A+PG ++ RL+V V A+ E V V F P P V+S++V P
Sbjct: 144 VIMVQREFAERMVAAPGTDDYGRLSVTVGHYAECEIVETVPPEAFSPPPAVESAIVRTSP 203
Query: 186 KAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFKQKKKVIEL 225
PD +DE + AF R F+++ KT+ + + E+
Sbjct: 204 CD--PDYAIDEMAFLAFVRAVFTQRRKTVRNAIRNTTHISEI 243
>gi|268318776|ref|YP_003292432.1| dimethyladenosine transferase [Lactobacillus johnsonii FI9785]
gi|262397151|emb|CAX66165.1| dimethyladenosine transferase [Lactobacillus johnsonii FI9785]
Length = 296
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 127/234 (54%), Gaps = 21/234 (8%)
Query: 3 FFHKSK--GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEI 60
F H K GQ+ L + + IV + I D V+EIGPG G+LT +LL KV A E+
Sbjct: 21 FMHAKKNLGQNFLVDLPAIKGIVEAADIQRGDQVIEIGPGIGSLTEQLLLAGAKVLAYEV 80
Query: 61 DERMVEILN----RRAADSGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPYG 106
D+ + EILN ++ DR ++ KD LK F + DL +VAN+PY
Sbjct: 81 DQDLPEILNNELPQKIDGEELKDRFKLVMKDVLKANFVEDNDGFLDLSKSVKIVANLPYY 140
Query: 107 ISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVS 166
I++P++ L+ F S TL++QKE A RL+A P E+ L++ V+ +V +V
Sbjct: 141 ITTPIIFNLIKSDLDFSSLTLMMQKEVAERLVAKPKTKEYGPLSIAVQSRMNVRLAEEVK 200
Query: 167 KRDFLPCPKVDSSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTLGATFK 217
F+P PKVDS+VV++ P E PD+N ++ F + CF+++ KTL K
Sbjct: 201 STSFMPRPKVDSAVVVLTPLLEKPDIN--DYAFFDHVVKMCFAQRRKTLANNLK 252
>gi|399888382|ref|ZP_10774259.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Clostridium arbusti SL206]
Length = 277
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 135/238 (56%), Gaps = 22/238 (9%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + VL IV+ + I+ +D V+EIGPG G LT +LL+ +K V AIE+D
Sbjct: 14 FTKSLGQNFLIDSTVLTDIVKGADISKEDFVIEIGPGVGTLTKQLLDSAKAVCAIELDSD 73
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFD------LVVANIPYGISSPLVAKLVY 117
++ IL + +D ++ KDALK +F + +VAN+PY +++P+++KL+
Sbjct: 74 LLPILEEELKE---YDNFTLVHKDALKVDFNEIINYENSVKLVANLPYYVTTPIISKLLI 130
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
F+S T+++QKE A R+ A P E+ L++ V+ D E + VS F+P PKV+
Sbjct: 131 SGYVFKSLTIMIQKEVAERIAAKPNCKEYGALSLLVQYYCDTEIIRKVSPASFIPQPKVE 190
Query: 178 SSVV----IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLSKQ 231
S V+ +I P+ ++ D L + R F+ + KTL KQ L+LSK+
Sbjct: 191 SIVIKLDRLIEPRVKVKDEKL--FFTIVRDSFNMRRKTLWNALKQ-------LKLSKE 239
>gi|448735320|ref|ZP_21717536.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halococcus salifodinae DSM 8989]
gi|445798658|gb|EMA49055.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halococcus salifodinae DSM 8989]
Length = 295
Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 124/209 (59%), Gaps = 7/209 (3%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
+++ QH L + RVLD + + VLEIG GTG LT ++L+V+ +V +E D R+
Sbjct: 27 RNQDQHFLVDDRVLDRLPTYAEGFDTSHVLEIGAGTGALTDRVLDVADRVTVVERDTRLA 86
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSA 125
+ L AD+ RL++I DAL + P+F V+N+PYG+SS ++ +L+ + R
Sbjct: 87 DFLREEFADACTDGRLDIIEGDALSVDLPEFSASVSNLPYGVSSEVLFRLL---PAKRPL 143
Query: 126 TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP 185
+++QKEFA R++A+PG ++ RL+V V A+ E V V F P P V+SSVV P
Sbjct: 144 VVMVQKEFAERMVAAPGTDDYGRLSVTVGHYAECEIVETVPPEAFSPPPAVESSVVRASP 203
Query: 186 KAEIPDVNLDE--WRAFTRTCFSKKNKTL 212
+ PD +DE + AF R F+++ KT+
Sbjct: 204 RD--PDYAIDETAFLAFVRAVFTQRRKTV 230
>gi|15896238|ref|NP_349587.1| dimethyladenosine transferase [Clostridium acetobutylicum ATCC 824]
gi|337738193|ref|YP_004637640.1| dimethyladenosine transferase [Clostridium acetobutylicum DSM 1731]
gi|27151592|sp|Q97EX0.1|RSMA_CLOAB RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|15026041|gb|AAK80927.1|AE007795_6 Dimethyladenosine transferase [Clostridium acetobutylicum ATCC 824]
gi|336292364|gb|AEI33498.1| dimethyladenosine transferase [Clostridium acetobutylicum DSM 1731]
Length = 276
Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/223 (38%), Positives = 128/223 (57%), Gaps = 13/223 (5%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K GQ+ LT+ VLD IV + I DD ++EIGPG G LT +LLE +KKV AIE+DE
Sbjct: 17 FSKRLGQNFLTDNTVLDDIVENAEIQKDDFIIEIGPGVGTLTRRLLEKAKKVCAIELDES 76
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLVAKLVY 117
++ I+ + +D +I DALK +F Q +VAN+PY +++P+++KL+
Sbjct: 77 LIPIITNEMKE---YDNFTLIHNDALKVDFNNIIGEEQSVKLVANLPYYVTTPIISKLLN 133
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
+F+S T+++QKE R+ A P ++ L + V+ DV+ V V F+P PKVD
Sbjct: 134 EGYNFKSLTIMIQKEVGDRIAAKPSTKDYGALTLLVQYYCDVKVVRVVKPSCFIPQPKVD 193
Query: 178 SSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTLGATFK 217
S+VI K E P V + + + F R+ F+ + KTL K
Sbjct: 194 -SLVIRLDKLEKPRVQVKDEKLFFNVIRSAFNMRRKTLWNAMK 235
>gi|384459704|ref|YP_005672124.1| dimethyladenosine transferase [Clostridium acetobutylicum EA 2018]
gi|325510393|gb|ADZ22029.1| dimethyladenosine transferase [Clostridium acetobutylicum EA 2018]
Length = 287
Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/223 (38%), Positives = 128/223 (57%), Gaps = 13/223 (5%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K GQ+ LT+ VLD IV + I DD ++EIGPG G LT +LLE +KKV AIE+DE
Sbjct: 28 FSKRLGQNFLTDNTVLDDIVENAEIQKDDFIIEIGPGVGTLTRRLLEKAKKVCAIELDES 87
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLVAKLVY 117
++ I+ + +D +I DALK +F Q +VAN+PY +++P+++KL+
Sbjct: 88 LIPIITNEMKE---YDNFTLIHNDALKVDFNNIIGEEQSVKLVANLPYYVTTPIISKLLN 144
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
+F+S T+++QKE R+ A P ++ L + V+ DV+ V V F+P PKVD
Sbjct: 145 EGYNFKSLTIMIQKEVGDRIAAKPSTKDYGALTLLVQYYCDVKVVRVVKPSCFIPQPKVD 204
Query: 178 SSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTLGATFK 217
S+VI K E P V + + + F R+ F+ + KTL K
Sbjct: 205 -SLVIRLDKLEKPRVQVKDEKLFFNVIRSAFNMRRKTLWNAMK 246
>gi|189500122|ref|YP_001959592.1| dimethyladenosine transferase [Chlorobium phaeobacteroides BS1]
gi|226729769|sp|B3EQT0.1|RSMA_CHLPB RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|189495563|gb|ACE04111.1| dimethyladenosine transferase [Chlorobium phaeobacteroides BS1]
Length = 262
Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 122/218 (55%), Gaps = 11/218 (5%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQ+ LT+Q + IV + + +D VLEIGPG G LT +LEV + A+E D +
Sbjct: 15 KKLGQNFLTDQNICRKIVESAQLQENDHVLEIGPGFGALTTAILEVVPRFTAVEKDRILA 74
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFD-----LVVANIPYGISSPLVAKLVYGTK 120
E + + + VI D LK + + ++ NIPY I++P++ KL+ +
Sbjct: 75 EFIRNE------YPSVRVIEMDFLKIDLEELASEGRLRIMGNIPYSITTPILFKLLDNRR 128
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
+ S TL++Q E ARRL+ASPG E+ LAV ++ DV ++ V++ F P P+VDS+V
Sbjct: 129 NIFSETLMMQHEVARRLVASPGSKEYGILAVQLQTFCDVTYLFKVNRTVFKPRPEVDSAV 188
Query: 181 VIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
V I PK I D + +R F RT F ++ KTL K+
Sbjct: 189 VSIIPKTAIFDADETGFRNFVRTSFGQRRKTLHNNLKK 226
>gi|297205158|ref|ZP_06922554.1| dimethyladenosine transferase [Lactobacillus jensenii JV-V16]
gi|297149736|gb|EFH30033.1| dimethyladenosine transferase [Lactobacillus jensenii JV-V16]
Length = 293
Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 142/251 (56%), Gaps = 22/251 (8%)
Query: 3 FFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDE 62
F K+ GQ+ L + ++ I+ + I DD VLEIGPG G+LT ++L KV A EID+
Sbjct: 23 FAKKNLGQNFLISLNKINDILDAAEIKSDDQVLEIGPGIGSLTEQMLLRGAKVLAYEIDQ 82
Query: 63 RMVEILN----RRAADSGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPYGIS 108
+ EIL+ ++ + D ++ KD LK +F + FDL VVAN+PY I+
Sbjct: 83 DLPEILHNELPQKVENKHLDDVFKLVMKDILKADFKEDIGDFFDLNKPIKVVANLPYYIT 142
Query: 109 SPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKR 168
+P++ L +F S TL++QKE A RL AS G+ E+ L + V+ V+ + V
Sbjct: 143 TPIIFALAKSDLAFESLTLMMQKEVAERLCASSGNKEYGPLTIFVQTQMAVKMAVMVDHT 202
Query: 169 DFLPCPKVDSSVVIIRPKAEIPDV-NLDEWRAFTRTCFSKKNKTLGATFK-------QKK 220
+F P PKVDS+VV+++P A+ DV + + + + CFS++ KTL K ++K
Sbjct: 203 NFNPQPKVDSAVVVLKPLAKKVDVGDTENFEHVVKMCFSQRRKTLNNNLKSLVKNGEERK 262
Query: 221 KVIELLRLSKQ 231
++++L L ++
Sbjct: 263 NLLQMLDLPEK 273
>gi|294936255|ref|XP_002781681.1| dimethyladenosine transferase, putative [Perkinsus marinus ATCC
50983]
gi|239892603|gb|EER13476.1| dimethyladenosine transferase, putative [Perkinsus marinus ATCC
50983]
Length = 913
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 118/187 (63%), Gaps = 3/187 (1%)
Query: 32 DTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKT 91
DTVLE+GPGTGN+++KL E++ +V A+E++E + + + RRA G + + V++ D +
Sbjct: 547 DTVLEMGPGTGNMSVKLSELANRVVAMEVNEGLAKEVERRAEMKGASN-MEVVTGDFKRL 605
Query: 92 EFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAV 151
P+FD+V+AN+PY +++ + KL+ FR+ ++LQ EF ++LLA PG+ ++RL++
Sbjct: 606 ALPRFDVVIANLPYHLATGFLLKLM--GHPFRTGIIMLQHEFGKKLLADPGEKIYSRLSL 663
Query: 152 NVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKT 211
N+++ E + V R F P P+ S ++ + P+ P V+ EW A R F +KN+
Sbjct: 664 NMRMFFKAERICKVPGRAFFPQPQTTSVIIRLTPRVPAPKVDFAEWDAMIRIAFFRKNQD 723
Query: 212 LGATFKQ 218
+ FK+
Sbjct: 724 VFKMFKR 730
>gi|418006241|ref|ZP_12646200.1| dimethyladenosine transferase [Lactobacillus casei UW1]
gi|410544165|gb|EKQ18501.1| dimethyladenosine transferase [Lactobacillus casei UW1]
Length = 298
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 129/224 (57%), Gaps = 19/224 (8%)
Query: 4 FH--KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
FH K GQ+ LT+ ++L IV + + P+D V+EIGPG G LT L + + +V A+EID
Sbjct: 22 FHMRKGLGQNFLTDSKILQKIVTAADLTPEDDVIEIGPGIGALTQFLADSAHQVVALEID 81
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEF-----PQFDL-----VVANIPYGISSPL 111
+R++ IL+ AD + V+++D LKT+ FD VVAN+PY I++P+
Sbjct: 82 DRLLPILDETLAD---YPNAMVVNEDVLKTDLGALVAEHFDGKHTLKVVANLPYYITTPI 138
Query: 112 VAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFL 171
+ L+ S T+++QKE A RL A+PG E+ L++ V+LVA V VS+ F+
Sbjct: 139 LLHLLRAQLPLHSMTVMMQKEVAERLSATPGSKEYGSLSIAVQLVASVATAFTVSRHAFV 198
Query: 172 PCPKVDSSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTL 212
P P VDS++V + + E P L + +F R F+ + KTL
Sbjct: 199 PAPNVDSAIVTLTQRTE-PLAALTDPASFDRLVRGAFASRRKTL 241
>gi|256851971|ref|ZP_05557358.1| dimethyladenosine transferase [Lactobacillus jensenii 27-2-CHN]
gi|260661459|ref|ZP_05862372.1| dimethyladenosine transferase [Lactobacillus jensenii 115-3-CHN]
gi|256615383|gb|EEU20573.1| dimethyladenosine transferase [Lactobacillus jensenii 27-2-CHN]
gi|260547914|gb|EEX23891.1| dimethyladenosine transferase [Lactobacillus jensenii 115-3-CHN]
Length = 297
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 142/251 (56%), Gaps = 22/251 (8%)
Query: 3 FFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDE 62
F K+ GQ+ L + ++ I+ + I DD VLEIGPG G+LT ++L KV A EID+
Sbjct: 27 FAKKNLGQNFLISLNKINDILDAAEIKSDDQVLEIGPGIGSLTEQMLLRGAKVLAYEIDQ 86
Query: 63 RMVEILN----RRAADSGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPYGIS 108
+ EIL+ ++ + D ++ KD LK +F + FDL VVAN+PY I+
Sbjct: 87 DLPEILHNELPQKVENKHLDDVFKLVMKDILKADFKEDIGDFFDLNKPIKVVANLPYYIT 146
Query: 109 SPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKR 168
+P++ L +F S TL++QKE A RL AS G+ E+ L + V+ V+ + V
Sbjct: 147 TPIIFALAKSDLAFESLTLMMQKEVAERLCASSGNKEYGPLTIFVQTQMAVKMAVMVDHT 206
Query: 169 DFLPCPKVDSSVVIIRPKAEIPDV-NLDEWRAFTRTCFSKKNKTLGATFK-------QKK 220
+F P PKVDS+VV+++P A+ DV + + + + CFS++ KTL K ++K
Sbjct: 207 NFNPQPKVDSAVVVLKPLAKKVDVGDTENFEHVVKMCFSQRRKTLNNNLKSLVKNGEERK 266
Query: 221 KVIELLRLSKQ 231
++++L L ++
Sbjct: 267 NLLQMLDLPEK 277
>gi|374339957|ref|YP_005096693.1| dimethyladenosine transferase [Marinitoga piezophila KA3]
gi|372101491|gb|AEX85395.1| dimethyladenosine transferase [Marinitoga piezophila KA3]
Length = 269
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 131/228 (57%), Gaps = 8/228 (3%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS GQ+ L+ IV+K S+ +DTV+EIGPG G LT ++ + K++A EIDER+
Sbjct: 16 KSLGQNFLSTSEYAKKIVKKGSVTEEDTVIEIGPGAGTLTEEIAKTGAKLYAFEIDERLK 75
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFD--LVVANIPYGISSPLVAKLVYGTKSFR 123
+L R + + + + D LK + +ANIPY I+SP++ K+ + T F+
Sbjct: 76 PLLLERFKE---YQNVEIQFIDFLKANISEIQKPKYIANIPYYITSPILEKIFFETPDFQ 132
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A L++QKE+ R++A G + ++ L++ V+ VE V++V F+P PKVDS V+ +
Sbjct: 133 LALLMVQKEYGERMMAKSGKN-YSPLSIFVQFFCKVEKVLNVPPHAFIPNPKVDSVVLKL 191
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ--KKKVIELLRLS 229
PK +IPD+N + F FS++ KT+ K K ++ ELL S
Sbjct: 192 TPKEDIPDINKKGFFKFVHVAFSQRRKTIRNNLKGLIKDRLDELLEKS 239
>gi|227532998|ref|ZP_03963047.1| dimethyladenosine transferase (S-adenosylmethionine-6-N ,
N-adenosyl(rRNA) dimethyltransferase) [Lactobacillus
paracasei subsp. paracasei ATCC 25302]
gi|227189399|gb|EEI69466.1| dimethyladenosine transferase (S-adenosylmethionine-6-N ,
N-adenosyl(rRNA) dimethyltransferase) [Lactobacillus
paracasei subsp. paracasei ATCC 25302]
Length = 302
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 129/224 (57%), Gaps = 19/224 (8%)
Query: 4 FH--KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
FH K GQ+ LT+ ++L IV + + P+D V+EIGPG G LT L + + +V A+EID
Sbjct: 26 FHMRKGLGQNFLTDSKILQKIVTAADLTPEDDVIEIGPGIGALTQFLADSAHQVVALEID 85
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEF-----PQFD-----LVVANIPYGISSPL 111
+R++ IL+ AD + V+++D LKT+ FD VVAN+PY I++P+
Sbjct: 86 DRLLPILDETLAD---YPNAMVVNEDVLKTDLGALVAEHFDGKHTLKVVANLPYYITTPI 142
Query: 112 VAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFL 171
+ L+ S T+++QKE A RL A+PG E+ L++ V+LVA V VS+ F+
Sbjct: 143 LLHLLRAQLPLHSMTVMMQKEVAERLSATPGSKEYGSLSIAVQLVASVATAFTVSRHAFV 202
Query: 172 PCPKVDSSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTL 212
P P VDS++V + + E P L + +F R F+ + KTL
Sbjct: 203 PAPNVDSAIVTLTQRTE-PLAALTDPASFDRLVRGAFASRRKTL 245
>gi|116496022|ref|YP_807756.1| dimethyladenosine transferase [Lactobacillus casei ATCC 334]
gi|418003370|ref|ZP_12643457.1| dimethyladenosine transferase [Lactobacillus casei UCD174]
gi|116106172|gb|ABJ71314.1| dimethyladenosine transferase [Lactobacillus casei ATCC 334]
gi|410542487|gb|EKQ16934.1| dimethyladenosine transferase [Lactobacillus casei UCD174]
Length = 298
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 129/224 (57%), Gaps = 19/224 (8%)
Query: 4 FH--KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
FH K GQ+ LT+ ++L IV + + P+D V+EIGPG G LT L + + +V A+EID
Sbjct: 22 FHMRKGLGQNFLTDSKILQKIVTAADLTPEDDVIEIGPGIGALTQFLADSAHQVVALEID 81
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEF-----PQFDL-----VVANIPYGISSPL 111
+R++ IL+ AD + V+++D LKT+ FD VVAN+PY I++P+
Sbjct: 82 DRLLPILDETLAD---YPNATVVNEDVLKTDLGALVAEHFDGKHTLKVVANLPYYITTPI 138
Query: 112 VAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFL 171
+ L+ S T+++Q+E A RL A+PG E+ L++ V+LVA V VS+ F+
Sbjct: 139 LLHLLRAQLPLHSMTVMMQREVAERLSATPGSKEYGSLSIAVQLVASVATAFTVSRHAFV 198
Query: 172 PCPKVDSSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTL 212
P P VDS++V + + E P L + +F R F+ + KTL
Sbjct: 199 PAPNVDSAIVTLTQRTE-PLAALTDPASFDRLVRGAFASRRKTL 241
>gi|73670681|ref|YP_306696.1| dimethyladenosine transferase [Methanosarcina barkeri str. Fusaro]
gi|118600876|sp|Q466S6.1|RSMA_METBF RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|72397843|gb|AAZ72116.1| dimethyladenosine transferase [Methanosarcina barkeri str. Fusaro]
Length = 287
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 118/206 (57%), Gaps = 10/206 (4%)
Query: 10 QHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILN 69
QH L + LD IV + + P D VLEIG G GNLT +L + KKV AIE+D +V +L+
Sbjct: 28 QHFLVDAGYLDRIVAAAELGPKDVVLEIGAGVGNLTERLAKKVKKVIAIELDPVLVRVLH 87
Query: 70 RRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLL 129
R G + +I+ DALK EFP+FD +V+N+PY ISS + KL+ F+ L+
Sbjct: 88 DRFDKVG---NIEIIAGDALKVEFPEFDKIVSNLPYSISSEITFKLL--RHKFKLGILMY 142
Query: 130 QKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKA-- 187
Q EFA R+++ P +++RL V+ AD +M V K F P P+VDS+V+ + P+
Sbjct: 143 QYEFAARMVSQPNCKDYSRLTVDTCYFADASILMKVPKSAFQPAPEVDSAVIKLVPRPVP 202
Query: 188 -EIPDVNLDEWRAFTRTCFSKKNKTL 212
E+ D + F FS++ K L
Sbjct: 203 FEVKDQAF--FMNFVSAVFSQRRKKL 226
>gi|402309572|ref|ZP_10828565.1| dimethyladenosine transferase [Eubacterium sp. AS15]
gi|400372539|gb|EJP25483.1| dimethyladenosine transferase [Eubacterium sp. AS15]
Length = 287
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/241 (36%), Positives = 133/241 (55%), Gaps = 20/241 (8%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS GQ+ L N+ +LD I+ + I+ DD VLEIG G G LT +L E +KKV A+EID ++
Sbjct: 24 KSLGQNFLINENILDKIIESADISSDDVVLEIGTGIGTLTQRLCENAKKVIAVEIDRNLI 83
Query: 66 EILNRRAADSGFHDRLNVISKDALKT----EFPQFDL-----VVANIPYGISSPLVAKLV 116
ILN ++ +D + +I+KD LKT E + VVAN+PY I++P++ K++
Sbjct: 84 PILNETLSN---YDNITIINKDILKTDINEELKNLSINQKIKVVANLPYYITTPIIMKVL 140
Query: 117 YGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKV 176
+ L+LQKE A R+ ASP ++ L++ V+ D V V K F+P P V
Sbjct: 141 EDKVNVDCMVLMLQKEVAERMNASPSTKDYGSLSIAVQYYCDTAIVCKVPKSSFIPEPNV 200
Query: 177 DSSV--VIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ------KKKVIELLRL 228
DS V +++ K ++ N D + R FSK+ KT+ + K K+ +LL +
Sbjct: 201 DSLVLKLVVNEKRKVDISNEDLFFKIVRGSFSKRRKTILNSLSNYEDLGDKDKIQKLLEI 260
Query: 229 S 229
S
Sbjct: 261 S 261
>gi|219851214|ref|YP_002465646.1| dimethyladenosine transferase [Methanosphaerula palustris E1-9c]
gi|219545473|gb|ACL15923.1| dimethyladenosine transferase [Methanosphaerula palustris E1-9c]
Length = 262
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/207 (41%), Positives = 117/207 (56%), Gaps = 10/207 (4%)
Query: 10 QHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILN 69
QH L +QR +D I+ + ++ +VLEIGPG G LT LL+ V AIE+D ++ L
Sbjct: 7 QHFLVDQRAIDRIIECAGVD-GKSVLEIGPGEGVLTRALLDAGATVSAIEVDRTLIAHLT 65
Query: 70 RRAAD---SGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSAT 126
R D SGF L +I DA + FP F+++VAN+PY ISSP+ +L+ F SA
Sbjct: 66 DRFVDEIRSGF---LTLIEGDAARCPFPPFEVMVANLPYSISSPITFRLL--DTDFSSAV 120
Query: 127 LLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPK 186
L+ Q+EFA R+ A G S RL+V V+ A VE +S F P P VDS VV IRP
Sbjct: 121 LMYQREFAARMAAPVGTSGCGRLSVMVQTYALVEECFTLSPFSFNPPPAVDSMVVRIRPY 180
Query: 187 AEI-PDVNLDEWRAFTRTCFSKKNKTL 212
I P + + A R FS++ KT+
Sbjct: 181 GPIFPITDRSVYAAVVRILFSQRRKTV 207
>gi|418009077|ref|ZP_12648918.1| dimethyladenosine transferase [Lactobacillus casei UW4]
gi|410544759|gb|EKQ19076.1| dimethyladenosine transferase [Lactobacillus casei UW4]
Length = 298
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 129/224 (57%), Gaps = 19/224 (8%)
Query: 4 FH--KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
FH K GQ+ LT+ ++L IV + + P+D V+EIGPG G LT L + + +V A+EID
Sbjct: 22 FHMRKGLGQNFLTDSKILQKIVTAADLTPEDDVIEIGPGIGALTQFLADSAHQVVALEID 81
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEF-----PQFD-----LVVANIPYGISSPL 111
+R++ IL+ AD + V+++D LKT+ FD VVAN+PY I++P+
Sbjct: 82 DRLLPILDETLAD---YPNAMVVNEDVLKTDLGALVAEHFDGKHTLKVVANLPYYITTPI 138
Query: 112 VAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFL 171
+ L+ S T+++QKE A RL A+PG E+ L++ V+LVA V VS+ F+
Sbjct: 139 LLHLLRAQLPLHSMTVMMQKEVAERLSATPGSKEYGSLSIAVQLVASVATAFMVSRHAFV 198
Query: 172 PCPKVDSSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTL 212
P P VDS++V + + E P L + +F R F+ + KTL
Sbjct: 199 PAPNVDSAIVTLTQRTE-PLAALTDPASFDRLVRGAFASRRKTL 241
>gi|91772907|ref|YP_565599.1| dimethyladenosine transferase [Methanococcoides burtonii DSM 6242]
gi|118600877|sp|Q12XH7.1|RSMA_METBU RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|91711922|gb|ABE51849.1| dimethyladenosine transferase [Methanococcoides burtonii DSM 6242]
Length = 270
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 110/177 (62%), Gaps = 5/177 (2%)
Query: 10 QHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILN 69
QH L ++R LDSIV ++ ++ D VLEIG G GNLT +LLE + KV+ IE+D +V +L
Sbjct: 18 QHFLIDERSLDSIVDQAELSEKDVVLEIGGGIGNLTERLLEKAGKVYVIELDPALVHVLK 77
Query: 70 RRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLL 129
R +D+ ++L +I D LK + P+F+ VVAN+PY ISSP+ KL F L+
Sbjct: 78 DRFSDN---EKLEIIPGDVLKLDLPKFNKVVANLPYSISSPITFKLF--KHEFELGILMY 132
Query: 130 QKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPK 186
Q EFA+R++A ++RL+VN AD + +M + F P P+V S+VV + P+
Sbjct: 133 QYEFAQRMVAKANTENYSRLSVNTHYFADADIIMKIPPSAFSPPPEVWSAVVKVVPR 189
>gi|255548465|ref|XP_002515289.1| dimethyladenosine transferase, putative [Ricinus communis]
gi|223545769|gb|EEF47273.1| dimethyladenosine transferase, putative [Ricinus communis]
Length = 177
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/158 (48%), Positives = 100/158 (63%), Gaps = 4/158 (2%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I FHKSKGQHIL N ++D+IV+KS I +LEIGPGTGNLT KLLE K V + ++
Sbjct: 22 ISFHKSKGQHILKNPLLVDTIVQKSGIKSTYVILEIGPGTGNLTKKLLEAGKMV--LLLN 79
Query: 62 ERMVEILNRRAADSG--FHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGT 119
+V + AA L VI D LKT+ P +D+ VANIPY ISSPL KL+
Sbjct: 80 LILVWFSSSSAAFRAPLCPIELLVIQGDVLKTDLPYYDICVANIPYQISSPLTFKLLNHQ 139
Query: 120 KSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVA 157
SFR A ++ Q+EFA R +A PGD+ + RL+VN + +
Sbjct: 140 PSFRCAIIMFQREFAMRFVAQPGDTLYCRLSVNTQTLC 177
>gi|72382118|ref|YP_291473.1| dimethyladenosine transferase [Prochlorococcus marinus str. NATL2A]
gi|119365047|sp|Q46L58.1|RSMA_PROMT RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|72001968|gb|AAZ57770.1| dimethyladenosine transferase [Prochlorococcus marinus str. NATL2A]
Length = 291
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/192 (44%), Positives = 117/192 (60%), Gaps = 9/192 (4%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKK-VHAIEIDERMVEI 67
GQH L +Q VLD IV+ + +NP+D VLE+GPG G LT KL+E + + AIE+D +V
Sbjct: 19 GQHWLKDQGVLDQIVKAAELNPEDCVLEVGPGKGALTEKLIESQARFIQAIELDRDLVVG 78
Query: 68 LNRR-AADSGFHDRLNVISKDALKTEFP-QFDLVVANIPYGISSPLVAKLVYGTK----- 120
L +R + + F R I L E + VVANIPY I+ PL+ +L+ +
Sbjct: 79 LKKRFSHQNKFSLREGDILSAPLDAENGLTINKVVANIPYNITGPLLKRLIGELRKAPDN 138
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
F + LL+QKE A+RLLA PG S F+ L+V ++L+A + V DV + F P PKVDS V
Sbjct: 139 CFETLVLLMQKEVAQRLLARPGTSNFSALSVRIQLLAKCQDVCDVPSKCFQPAPKVDSKV 198
Query: 181 VIIRPKAEI-PD 191
V+I+P A I PD
Sbjct: 199 VMIKPFASIDPD 210
>gi|148686526|gb|EDL18473.1| RIKEN cDNA 1500031M22, isoform CRA_a [Mus musculus]
gi|148686527|gb|EDL18474.1| RIKEN cDNA 1500031M22, isoform CRA_a [Mus musculus]
Length = 236
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/138 (50%), Positives = 89/138 (64%)
Query: 80 RLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLLQKEFARRLLA 139
+L V+ D LK++ P FD VAN+PY ISSP V KL+ FR A L+ Q+EFA RL+A
Sbjct: 29 KLQVLVGDVLKSDLPFFDACVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVA 88
Query: 140 SPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAEIPDVNLDEWRA 199
PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV I PK P +N EW
Sbjct: 89 KPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVVRIEPKNPPPPINFQEWDG 148
Query: 200 FTRTCFSKKNKTLGATFK 217
R F +KNKTL A FK
Sbjct: 149 LVRITFVRKNKTLSAAFK 166
>gi|15679326|ref|NP_276443.1| dimethyladenosine transferase [Methanothermobacter
thermautotrophicus str. Delta H]
gi|27151554|sp|O27381.1|RSMA_METTH RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|2622432|gb|AAB85804.1| dimethyladenosine transferase [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 273
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 125/214 (58%), Gaps = 7/214 (3%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
+S GQ+ L ++ I+ + + DD VLEIGPG G LTL + E++ V AIE D +
Sbjct: 21 RSLGQNYLIDEVKRQRILEYADLREDDRVLEIGPGIGTLTLPMAELAGHVTAIESDPLIA 80
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSA 125
IL R D ++VI DAL+ +FP+F+ VV+N+PY ISSP+ +L+ F A
Sbjct: 81 AILMDRLQ----VDNVDVIVGDALRVDFPEFNKVVSNLPYQISSPITFRLL--EHDFELA 134
Query: 126 TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP 185
L+ QKEFARR++A PG E++RL+V V +A+VE V + F P P+V+S+VV ++P
Sbjct: 135 VLMYQKEFARRMVAEPGTREYSRLSVMVHFLAEVEIVDYLKPGCFFPRPRVESAVVTLKP 194
Query: 186 KA-EIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
P D RA + K +K+L +F +
Sbjct: 195 TGFRAPAFLEDVCRALFQHRKKKTSKSLRESFHE 228
>gi|443668518|ref|ZP_21134201.1| dimethyladenosine transferase [Microcystis aeruginosa DIANCHI905]
gi|159030325|emb|CAO91220.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443330807|gb|ELS45499.1| dimethyladenosine transferase [Microcystis aeruginosa DIANCHI905]
Length = 268
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 117/186 (62%), Gaps = 11/186 (5%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQH L ++ +LD I+ +++ +D VLEIGPGTG LT +LL+ ++ V A+EID + IL
Sbjct: 10 GQHWLKDESILDRIIGAANLQSEDRVLEIGPGTGILTRRLLDGAQLVVAVEIDRDLWTIL 69
Query: 69 NRRAADSGFHDRLNVISKDAL---KTEFPQFDLVVANIPYGISSPLVAKLVYG-----TK 120
N++ G D ++I D L + P + VVANIPY I+ P++ KL+ T
Sbjct: 70 NKKF---GQQDNFHLIPGDFLTLKPEQLPPVNKVVANIPYNITGPILEKLLGSIAHPFTP 126
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
++S TLLLQKE A RL+A P ++ L+V ++ +AD +++ DV +R F P P+VDS+V
Sbjct: 127 PYQSITLLLQKEVAERLVAVPSTKAYSALSVRIQYLADCQWICDVPRRAFSPPPRVDSAV 186
Query: 181 VIIRPK 186
+ I P+
Sbjct: 187 IQILPR 192
>gi|434393089|ref|YP_007128036.1| dimethyladenosine transferase [Gloeocapsa sp. PCC 7428]
gi|428264930|gb|AFZ30876.1| dimethyladenosine transferase [Gloeocapsa sp. PCC 7428]
Length = 273
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/239 (37%), Positives = 134/239 (56%), Gaps = 24/239 (10%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
QH L N++ L+ IV + I D +LEIGPGTG LT +LL +++ V A+EID + E+L
Sbjct: 9 AQHWLKNEKALNQIVAAAEITKRDRILEIGPGTGVLTRRLLPLAESVVAVEIDLDLCELL 68
Query: 69 NRRAADSGFHDRLNVISKD-------ALKTEFPQF---DLVVANIPYGISSPLVAKLVYG 118
++ ++ + ++ D +L T FP F + VVANIPY I+ P++ KL+ G
Sbjct: 69 AKKLGNT---ENFLLLQGDFLELDLPSLLTSFPNFQSPNKVVANIPYNITGPILEKLL-G 124
Query: 119 T------KSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
T + F LL+QKE A RL A PG F L+V V+ +A+ EF+ V+ + F P
Sbjct: 125 TIANPNPQPFDLIVLLVQKEVADRLYAKPGSKTFGALSVRVQYLAECEFIYHVNAKSFYP 184
Query: 173 CPKVDSSVVIIRPKA-EIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLSK 230
PKVDS+VV +RP+ ++P +N + F+ K K L K +IE RL+K
Sbjct: 185 PPKVDSAVVRLRPRQLQLPPLNPHHLETLVQLGFAAKRKMLRNNL---KAIIERDRLTK 240
>gi|226947305|ref|YP_002802396.1| dimethyladenosine transferase [Clostridium botulinum A2 str. Kyoto]
gi|259494243|sp|C1FQ40.1|RSMA_CLOBJ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226840947|gb|ACO83613.1| dimethyladenosine transferase [Clostridium botulinum A2 str. Kyoto]
Length = 275
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 135/223 (60%), Gaps = 13/223 (5%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+K+ GQ+ L ++ VL+ I+ + IN +DTV+EIGPG G LT +LLE +K+V++IE+D
Sbjct: 14 FNKNLGQNFLIDESVLEDIIEGAEINKEDTVIEIGPGVGTLTKELLERAKEVYSIELDGD 73
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQF----DLV--VANIPYGISSPLVAKLVY 117
++ IL + ++ +I KDALK +F + D + VAN+PY +++P++++L+
Sbjct: 74 LIPILQEELKE---YNNFTLIHKDALKIDFNELMENKDSIKLVANLPYYVTTPIISRLLT 130
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
+F+S T+++QKE A R+ A P E+ L V V+ + + + VS F+P PKVD
Sbjct: 131 EKCNFKSLTIMIQKEVAERINAEPNCKEYGSLTVLVQYYCNTKIIRKVSPNSFIPRPKVD 190
Query: 178 SSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTLGATFK 217
S V+ + +E P V + + F R+ F+ + KTL + K
Sbjct: 191 SIVIKLDRLSE-PRVRVKSQKLFFNVVRSSFNMRRKTLWNSLK 232
>gi|417990878|ref|ZP_12631339.1| dimethyladenosine transferase [Lactobacillus casei A2-362]
gi|417994208|ref|ZP_12634542.1| dimethyladenosine transferase [Lactobacillus casei CRF28]
gi|418000225|ref|ZP_12640421.1| dimethyladenosine transferase [Lactobacillus casei T71499]
gi|410530524|gb|EKQ05297.1| dimethyladenosine transferase [Lactobacillus casei CRF28]
gi|410533320|gb|EKQ08001.1| dimethyladenosine transferase [Lactobacillus casei A2-362]
gi|410537145|gb|EKQ11724.1| dimethyladenosine transferase [Lactobacillus casei T71499]
Length = 298
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 129/224 (57%), Gaps = 19/224 (8%)
Query: 4 FH--KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
FH K GQ+ LT+ ++L IV + + P+D V+EIGPG G LT L + + +V A+EID
Sbjct: 22 FHMRKGLGQNFLTDSKILQKIVTAADLTPEDDVIEIGPGIGALTQFLADSAHQVVALEID 81
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEF-----PQFD-----LVVANIPYGISSPL 111
+R++ IL+ AD + V+++D LKT+ FD VVAN+PY I++P+
Sbjct: 82 DRLLPILDETLAD---YPNATVVNEDVLKTDLGALVAEHFDGKHTLKVVANLPYYITTPI 138
Query: 112 VAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFL 171
+ L+ S T+++QKE A RL A+PG E+ L++ V+LVA V VS+ F+
Sbjct: 139 LLHLLRAQLPLHSMTVMMQKEVAERLSATPGSKEYGSLSIAVQLVASVATAFTVSRHAFV 198
Query: 172 PCPKVDSSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTL 212
P P VDS++V + + + P L + +F R F+ + KTL
Sbjct: 199 PAPNVDSAIVTLTQRTK-PLAALTDPASFDRLVRGAFASRRKTL 241
>gi|116628883|ref|YP_814055.1| dimethyladenosine transferase [Lactobacillus gasseri ATCC 33323]
gi|420147807|ref|ZP_14655082.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
gasseri CECT 5714]
gi|116094465|gb|ABJ59617.1| dimethyladenosine transferase [Lactobacillus gasseri ATCC 33323]
gi|398400954|gb|EJN54485.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
gasseri CECT 5714]
Length = 298
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 126/234 (53%), Gaps = 21/234 (8%)
Query: 3 FFHKSK--GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEI 60
F H K GQ+ L + + IV + I D V+EIGPG G+LT +LL KV A E+
Sbjct: 23 FMHAKKNLGQNFLVDLAAIKGIVEAADIQSGDQVIEIGPGIGSLTEQLLLAGAKVLAYEV 82
Query: 61 DERMVEILN----RRAADSGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPYG 106
D+ + EIL ++ + R ++ KD LK F + DL +VAN+PY
Sbjct: 83 DQDLPEILKNELPQKIDGEELNSRFKLVMKDVLKANFTKDSDGFLDLNKPVKIVANLPYY 142
Query: 107 ISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVS 166
I++P++ L+ F S TL++QKE A RL+A P E+ L + V+ +VE +V
Sbjct: 143 ITTPIIFNLIKSDLDFSSLTLMMQKEVAERLVAIPKTKEYGPLTIAVQSRMNVELAEEVK 202
Query: 167 KRDFLPCPKVDSSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTLGATFK 217
F+P PKVDS+VV++ P E P N+D++ F + CF+++ KTL K
Sbjct: 203 STSFMPRPKVDSAVVVLTPLTEKP--NIDDYSFFDHVVKMCFAQRRKTLANNLK 254
>gi|227894433|ref|ZP_04012238.1| dimethyladenosine transferase [Lactobacillus ultunensis DSM 16047]
gi|227863803|gb|EEJ71224.1| dimethyladenosine transferase [Lactobacillus ultunensis DSM 16047]
Length = 294
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 128/233 (54%), Gaps = 18/233 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+F K+K GQ+ L +Q + IV ++I D V+EIGPG G+LT +LL KV A E
Sbjct: 20 YFVKAKKNLGQNFLVDQNAILGIVEAANIQSGDQVIEIGPGIGSLTEQLLLAGAKVFAYE 79
Query: 60 IDERMVEILN----RRAADSGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPY 105
+D+ + EIL+ ++ R + KD LK F + FD+ VVAN+PY
Sbjct: 80 VDDSLPEILHNELPKKIDGEPLEARFKLTLKDVLKANFEKDLTGFFDMGKPIKVVANLPY 139
Query: 106 GISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDV 165
I++P++ L F S TL++QKE A RL A PG+ E+ L ++V+ +V ++V
Sbjct: 140 YITTPIIFVLAESDLHFTSLTLMMQKEVAERLEAKPGNKEYGPLTISVQTEMNVRLALEV 199
Query: 166 SKRDFLPCPKVDSSVVIIRPKAEIPDV-NLDEWRAFTRTCFSKKNKTLGATFK 217
F+P P+VDSSVV++ P + P + N + + CFS++ KTL K
Sbjct: 200 KNTSFMPRPRVDSSVVVLTPLKDKPAIENRKHFIWVVKMCFSQRRKTLNNNLK 252
>gi|238852850|ref|ZP_04643255.1| dimethyladenosine transferase [Lactobacillus gasseri 202-4]
gi|282852550|ref|ZP_06261892.1| dimethyladenosine transferase [Lactobacillus gasseri 224-1]
gi|311111301|ref|ZP_07712698.1| dimethyladenosine transferase [Lactobacillus gasseri MV-22]
gi|238834544|gb|EEQ26776.1| dimethyladenosine transferase [Lactobacillus gasseri 202-4]
gi|282556292|gb|EFB61912.1| dimethyladenosine transferase [Lactobacillus gasseri 224-1]
gi|311066455|gb|EFQ46795.1| dimethyladenosine transferase [Lactobacillus gasseri MV-22]
Length = 296
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 126/234 (53%), Gaps = 21/234 (8%)
Query: 3 FFHKSK--GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEI 60
F H K GQ+ L + + IV + I D V+EIGPG G+LT +LL KV A E+
Sbjct: 21 FMHAKKNLGQNFLVDLAAIKGIVEAADIQSGDQVIEIGPGIGSLTEQLLLAGAKVLAYEV 80
Query: 61 DERMVEILN----RRAADSGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPYG 106
D+ + EIL ++ + R ++ KD LK F + DL +VAN+PY
Sbjct: 81 DQDLPEILKNELPQKIDGEELNSRFKLVMKDVLKANFTKDSDGFLDLNKPVKIVANLPYY 140
Query: 107 ISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVS 166
I++P++ L+ F S TL++QKE A RL+A P E+ L + V+ +VE +V
Sbjct: 141 ITTPIIFNLIKSDLDFSSLTLMMQKEVAERLVAIPKTKEYGPLTIAVQSRMNVELAEEVK 200
Query: 167 KRDFLPCPKVDSSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTLGATFK 217
F+P PKVDS+VV++ P E P N+D++ F + CF+++ KTL K
Sbjct: 201 STSFMPRPKVDSAVVVLTPLTEKP--NIDDYSFFDHVVKMCFAQRRKTLANNLK 252
>gi|306820341|ref|ZP_07453980.1| dimethyladenosine transferase [Eubacterium yurii subsp. margaretiae
ATCC 43715]
gi|304551670|gb|EFM39622.1| dimethyladenosine transferase [Eubacterium yurii subsp. margaretiae
ATCC 43715]
Length = 287
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/241 (36%), Positives = 132/241 (54%), Gaps = 20/241 (8%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS GQ+ L N+ +LD I+ + I+ DD VLEIG G G LT +L E +KKV A+EID ++
Sbjct: 24 KSLGQNFLINENILDKIIESADISSDDVVLEIGTGIGTLTQRLCENAKKVIAVEIDRNLI 83
Query: 66 EILNRRAADSGFHDRLNVISKDALKT----EFPQFDL-----VVANIPYGISSPLVAKLV 116
ILN ++ +D + +I+KD LKT E + VVAN+PY I++P++ K++
Sbjct: 84 PILNETLSN---YDNITIINKDILKTDINEELKNLSINQKIKVVANLPYYITTPIIMKVL 140
Query: 117 YGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKV 176
+ L+LQKE A R+ ASP ++ L++ V+ D V V K F+P P V
Sbjct: 141 EDKVNVDCMVLMLQKEVADRMNASPSTKDYGSLSIAVQYYCDTAIVCKVPKSSFIPEPNV 200
Query: 177 DSSV--VIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ------KKKVIELLRL 228
DS V +++ K + N D + R FSK+ KT+ + K K+ +LL +
Sbjct: 201 DSLVLKLVVNEKRNVDISNEDLFFKIVRGSFSKRRKTILNSLSNYEDLGDKDKIQKLLEI 260
Query: 229 S 229
S
Sbjct: 261 S 261
>gi|373465297|ref|ZP_09556770.1| dimethyladenosine transferase [Lactobacillus kisonensis F0435]
gi|371760921|gb|EHO49581.1| dimethyladenosine transferase [Lactobacillus kisonensis F0435]
Length = 296
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 123/219 (56%), Gaps = 15/219 (6%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS GQ+ L + VL +IV + I DD V+EIGPG G LT +L +V+ +V EID+ ++
Sbjct: 26 KSLGQNFLVDLNVLSNIVEAAEITGDDDVIEIGPGIGGLTEQLAKVAHRVLGFEIDQNLL 85
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQF---DL-------VVANIPYGISSPLVAKL 115
+L A + + +I++D LK PQ +L VVAN+PY I++P+V L
Sbjct: 86 PVLQETLAP---YSNIKIINQDILKANLPQVVKTELTGKHPLKVVANLPYYITTPIVMNL 142
Query: 116 VYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPK 175
+ G +F + +++QKE A RL A PG + L+V V+ +VE V + F+P PK
Sbjct: 143 LAGDLAFDAIVVMMQKEVAERLTAVPGTKAYGSLSVIVQERNNVEISFIVPRTAFIPQPK 202
Query: 176 VDSSVVIIRPKAEIPDVNLDEWR--AFTRTCFSKKNKTL 212
VDS+++ + PK V DE R F R CF + KTL
Sbjct: 203 VDSAIIKLTPKLAKEVVPFDEKRFAGFVRGCFMHQRKTL 241
>gi|334120144|ref|ZP_08494226.1| Ribosomal RNA small subunit methyltransferase A [Microcoleus
vaginatus FGP-2]
gi|333456932|gb|EGK85559.1| Ribosomal RNA small subunit methyltransferase A [Microcoleus
vaginatus FGP-2]
Length = 273
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/240 (38%), Positives = 132/240 (55%), Gaps = 20/240 (8%)
Query: 5 HKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERM 64
K QH L +++ LD IV+ +S++ D VLEIGPGTG LT +LL ++ V A+EID
Sbjct: 7 RKQFAQHWLKSEKALDKIVKAASLD-RDRVLEIGPGTGILTRRLLPAAESVVAVEIDR-- 63
Query: 65 VEILNRRAADSGFHDRLNVISKDALK-------TEFPQF---DLVVANIPYGISSPLVAK 114
++ + A G D ++ D L+ T FP+F + VVANIPY I+ P++ K
Sbjct: 64 -DLCLKLAKQLGKTDNFLLLQGDILEMDLEAELTAFPKFQNPNKVVANIPYNITGPILQK 122
Query: 115 L-----VYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRD 169
L V K F S LL+QKE A+RL A PG + F L+V V+ +A+ E + DV +D
Sbjct: 123 LLGTISVPAAKPFDSIVLLVQKEVAQRLYAKPGSTAFGALSVRVQYLAECELICDVPSKD 182
Query: 170 FLPCPKVDSSVVIIRPK-AEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRL 228
F P PKVDS+VV + P+ E P VN + F K K L K + +L++L
Sbjct: 183 FFPPPKVDSAVVRLVPRLIETPAVNPRYLENLVKLGFGSKRKMLRNNLKGAVDLDKLVQL 242
>gi|421185658|ref|ZP_15643057.1| dimethyladenosine transferase [Oenococcus oeni AWRIB418]
gi|399968921|gb|EJO03352.1| dimethyladenosine transferase [Oenococcus oeni AWRIB418]
Length = 292
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 123/190 (64%), Gaps = 10/190 (5%)
Query: 4 FHKSK--GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
H SK GQ+ L + VL IV+ ++I PDDTV+EIGPG G+LT +L +V+K+V A EID
Sbjct: 22 LHASKRLGQNFLIDLNVLQEIVQGAAIGPDDTVIEIGPGIGSLTEQLAKVAKQVVAYEID 81
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL-----VVANIPYGISSPLVAKLV 116
++++ IL+ + + ++++D LK +F F +VAN+PY I++P++ L+
Sbjct: 82 KKLIPILSETLRP---YKNVEIVNRDILKADFSIFAKNQSLKIVANLPYYITTPILFYLL 138
Query: 117 YGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKV 176
+ +F+S T+++QKE A RL A G ++ L++ ++ +VE ++ V+++ F+P P V
Sbjct: 139 NSSLNFKSVTVMMQKEVAARLQAGVGSKDYGELSLAIQYRVNVEIILPVTRKSFMPSPNV 198
Query: 177 DSSVVIIRPK 186
DS+VV + PK
Sbjct: 199 DSAVVQLTPK 208
>gi|197105173|ref|YP_002130550.1| dimethyladenosine transferase [Phenylobacterium zucineum HLK1]
gi|226732606|sp|B4RBS4.1|RSMA_PHEZH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|196478593|gb|ACG78121.1| dimethyladenosine transferase [Phenylobacterium zucineum HLK1]
Length = 285
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 120/222 (54%), Gaps = 9/222 (4%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
++ K+ GQH L + + I R + + D V+E+GPG G LT LLE +V A+E D
Sbjct: 18 LWAKKAFGQHFLLDLNITRKIARLAQVGDGDVVIEVGPGPGGLTRALLETGARVIAVEKD 77
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL-----VVANIPYGISSPLVAKLV 116
ER +L AD+ H L ++ DAL + +V+N+PY + +PL+ K +
Sbjct: 78 ERFRPLLQE-VADAAPH--LTLVFGDALTADEAALSAGRPAHLVSNLPYNVGTPLLIKWL 134
Query: 117 YGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKV 176
G + S TL+ QKE A R+ A+PG+ + RLAV + AD VMDV R F P PKV
Sbjct: 135 TGPWTPASLTLMFQKEVADRITAAPGEDAYGRLAVIAQATADARPVMDVPARAFTPPPKV 194
Query: 177 DSSVVIIRPKAEIPDVN-LDEWRAFTRTCFSKKNKTLGATFK 217
+S+VV + P+A P LD + T F ++ K L ++ K
Sbjct: 195 ESAVVRLEPRAARPSPERLDALQKVTAAAFGQRRKMLRSSLK 236
>gi|148378088|ref|YP_001252629.1| dimethyladenosine transferase [Clostridium botulinum A str. ATCC
3502]
gi|148287572|emb|CAL81637.1| dimethyladenosine transferase [Clostridium botulinum A str. ATCC
3502]
Length = 278
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 134/223 (60%), Gaps = 13/223 (5%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+K+ GQ+ L ++ VL+ I+ + IN +DTV+EIGPG G LT +LLE +K+V++IE+D
Sbjct: 17 FNKNLGQNFLIDESVLEDIIEGAEINKEDTVIEIGPGVGTLTKELLERAKEVYSIELDGD 76
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQF----DLV--VANIPYGISSPLVAKLVY 117
++ IL + ++ +I KDALK +F + D + VAN+PY +++P++++L+
Sbjct: 77 LIPILQEELKE---YNNFTLIHKDALKIDFNELMENKDSIKLVANLPYYVTTPIISRLLT 133
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
F+S T+++QKE A R+ A P E+ L V V+ + + + VS F+P PKVD
Sbjct: 134 EKCDFKSLTIMIQKEVAERINAEPNCKEYGSLTVLVQYYCNTKIIRKVSPNSFIPRPKVD 193
Query: 178 SSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTLGATFK 217
S V+ + +E P V + + F R+ F+ + KTL + K
Sbjct: 194 SIVIKLDRLSE-PRVRVKSQKLFFNVVRSSFNMRRKTLWNSLK 235
>gi|168182310|ref|ZP_02616974.1| dimethyladenosine transferase [Clostridium botulinum Bf]
gi|237793398|ref|YP_002860950.1| dimethyladenosine transferase [Clostridium botulinum Ba4 str. 657]
gi|259494242|sp|C3KXY4.1|RSMA_CLOB6 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|182674690|gb|EDT86651.1| dimethyladenosine transferase [Clostridium botulinum Bf]
gi|229261997|gb|ACQ53030.1| dimethyladenosine transferase [Clostridium botulinum Ba4 str. 657]
Length = 275
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 134/223 (60%), Gaps = 13/223 (5%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+K+ GQ+ L ++ VL+ I+ + IN +DTV+EIGPG G LT +LLE +K+V++IE+D
Sbjct: 14 FNKNLGQNFLIDESVLEDIIEGAEINKEDTVIEIGPGVGTLTKELLERAKEVYSIELDGD 73
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQF----DLV--VANIPYGISSPLVAKLVY 117
++ IL + ++ +I KDALK +F + D + VAN+PY +++P++++L+
Sbjct: 74 LIPILQEELKE---YNNFTLIHKDALKIDFNRLMENKDSIKLVANLPYYVTTPIISRLLT 130
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
F+S T+++QKE A R+ A P E+ L V V+ D + + VS F+P PKVD
Sbjct: 131 EKCDFKSLTIMIQKEVAERINAEPNCKEYGSLTVLVQYYCDTKIIRKVSPNCFIPRPKVD 190
Query: 178 SSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTLGATFK 217
S V+ + +E P V + + F R+ F+ + KTL + K
Sbjct: 191 SIVIKLDRLSE-PRVRVKSEKLFFNVVRSSFNMRRKTLWNSLK 232
>gi|425456205|ref|ZP_18835916.1| Ribosomal RNA small subunit methyltransferase A [Microcystis
aeruginosa PCC 9807]
gi|389802755|emb|CCI18231.1| Ribosomal RNA small subunit methyltransferase A [Microcystis
aeruginosa PCC 9807]
Length = 268
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 117/186 (62%), Gaps = 11/186 (5%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQH L ++ +LD I+ +++ +D VLEIGPGTG LT +LL+ ++ V A+EID + IL
Sbjct: 10 GQHWLKDESILDRIIGAANLQSEDRVLEIGPGTGILTRRLLDGAQLVVAVEIDRDLWTIL 69
Query: 69 NRRAADSGFHDRLNVISKDAL---KTEFPQFDLVVANIPYGISSPLVAKLVYG-----TK 120
N++ G D ++I D L + P + VVANIPY I+ P++ KL+ T
Sbjct: 70 NKKF---GQQDNFHLIPGDFLTLKPEQLPPVNKVVANIPYNITGPILEKLLGSIAHPFTP 126
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
++S TLLLQKE A RL+A P ++ L+V ++ +AD +++ DV +R F P P+VDS+V
Sbjct: 127 PYQSITLLLQKEVAERLVAVPSTKAYSALSVRIQYLADCQWICDVPRRAFSPPPRVDSAV 186
Query: 181 VIIRPK 186
+ + P+
Sbjct: 187 IQLLPR 192
>gi|153931501|ref|YP_001382487.1| dimethyladenosine transferase [Clostridium botulinum A str. ATCC
19397]
gi|153937047|ref|YP_001386039.1| dimethyladenosine transferase [Clostridium botulinum A str. Hall]
gi|387816312|ref|YP_005676656.1| dimethyladenosine transferase [Clostridium botulinum H04402 065]
gi|259494241|sp|A7FQA9.1|RSMA_CLOB1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|152927545|gb|ABS33045.1| dimethyladenosine transferase [Clostridium botulinum A str. ATCC
19397]
gi|152932961|gb|ABS38460.1| dimethyladenosine transferase [Clostridium botulinum A str. Hall]
gi|322804353|emb|CBZ01903.1| dimethyladenosine transferase [Clostridium botulinum H04402 065]
Length = 275
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 134/223 (60%), Gaps = 13/223 (5%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+K+ GQ+ L ++ VL+ I+ + IN +DTV+EIGPG G LT +LLE +K+V++IE+D
Sbjct: 14 FNKNLGQNFLIDESVLEDIIEGAEINKEDTVIEIGPGVGTLTKELLERAKEVYSIELDGD 73
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQF----DLV--VANIPYGISSPLVAKLVY 117
++ IL + ++ +I KDALK +F + D + VAN+PY +++P++++L+
Sbjct: 74 LIPILQEELKE---YNNFTLIHKDALKIDFNELMENKDSIKLVANLPYYVTTPIISRLLT 130
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
F+S T+++QKE A R+ A P E+ L V V+ + + + VS F+P PKVD
Sbjct: 131 EKCDFKSLTIMIQKEVAERINAEPNCKEYGSLTVLVQYYCNTKIIRKVSPNSFIPRPKVD 190
Query: 178 SSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTLGATFK 217
S V+ + +E P V + + F R+ F+ + KTL + K
Sbjct: 191 SIVIKLDRLSE-PRVRVKSQKLFFNVVRSSFNMRRKTLWNSLK 232
>gi|366087169|ref|ZP_09453654.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Lactobacillus zeae KCTC 3804]
Length = 298
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/219 (36%), Positives = 125/219 (57%), Gaps = 15/219 (6%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQ+ LT+ ++L IV + ++ D V+EIGPG G LT L + + +V A+EIDER++
Sbjct: 26 KGLGQNFLTDPQILQKIVAAADLSSQDDVIEIGPGIGALTQFLADSAHQVVALEIDERLL 85
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFP-----QFDL-----VVANIPYGISSPLVAKL 115
IL AD + V+++D LKT+ FD VVAN+PY I++P++ L
Sbjct: 86 PILAETLAD---YPNTAVVNEDVLKTDLSALVAEHFDGKHTLKVVANLPYYITTPILLHL 142
Query: 116 VYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPK 175
+ S T+++QKE A RL A+PG ++ L++ V+LVADV VS+ F+P P
Sbjct: 143 LRARLPLHSMTVMMQKEVAARLSATPGSKDYGSLSIAVQLVADVTTAFTVSRHAFVPAPN 202
Query: 176 VDSSVVIIRPKAE--IPDVNLDEWRAFTRTCFSKKNKTL 212
VDS++V + ++E N D + R F+ + KTL
Sbjct: 203 VDSAIVTLTQRSEPLAAVTNPDSFERLVRGAFASRRKTL 241
>gi|417987836|ref|ZP_12628389.1| dimethyladenosine transferase [Lactobacillus casei 32G]
gi|410522228|gb|EKP97177.1| dimethyladenosine transferase [Lactobacillus casei 32G]
Length = 298
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 129/224 (57%), Gaps = 19/224 (8%)
Query: 4 FH--KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
FH K GQ+ LT+ ++L IV + + P+D V+EIGPG G LT L + + +V A+EID
Sbjct: 22 FHIRKGLGQNFLTDSKILQKIVTAADLTPEDDVIEIGPGIGALTQFLADSAHQVVALEID 81
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEF-----PQFD-----LVVANIPYGISSPL 111
+R++ IL+ AD + V+++D LKT+ FD VVAN+PY I++P+
Sbjct: 82 DRLLPILDETLAD---YPNATVVNEDVLKTDLGALVAEHFDGKHTLKVVANLPYYITTPI 138
Query: 112 VAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFL 171
+ L+ S T+++QKE A RL A+PG E+ L++ V+LVA V VS+ F+
Sbjct: 139 LLHLLRAQLPLHSMTVMMQKEVAERLSATPGSKEYGSLSIAVQLVASVVTAFTVSRHAFV 198
Query: 172 PCPKVDSSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTL 212
P P VDS++V + + + P L + +F R F+ + KTL
Sbjct: 199 PAPNVDSAIVTLTQRTK-PLAALTDPASFDRLVRGAFASRRKTL 241
>gi|288559416|ref|YP_003422902.1| dimethyladenosine transferase KsgA [Methanobrevibacter ruminantium
M1]
gi|288542126|gb|ADC46010.1| dimethyladenosine transferase KsgA [Methanobrevibacter ruminantium
M1]
Length = 298
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/221 (36%), Positives = 132/221 (59%), Gaps = 5/221 (2%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I +K+ GQ+ L + I+ +++ +DTVLEIGPG G LT++L + +KKV AIE D
Sbjct: 20 IKLNKNLGQNYLIDDFKRKKIINYANLTKEDTVLEIGPGIGTLTIELAKRAKKVIAIEQD 79
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
E + IL +R ++ + +I+ DA+K +FP+F+ +V+N+PY ISSP+ K +
Sbjct: 80 ETIFNILKKRLEKEKINN-VELINGDAVKVDFPEFNKIVSNLPYQISSPISFKFL--NHD 136
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
F A L+ QKEFA R+ G +++RL+ + ADV+F+ VS F+P PKVDS+V+
Sbjct: 137 FDLAILMYQKEFADRMNGKVGTKQYSRLSAMLYFKADVKFLTKVSPESFIPSPKVDSAVI 196
Query: 182 IIRPKAEIPDVNL-DEWRAFTRTCFSKKNKTLGATFKQKKK 221
++PK I + + D+ + + +K + A F+ + K
Sbjct: 197 QLKPK-NIDSIRINDKEYEIDKETYKTYSKVVKALFQHRNK 236
>gi|194333711|ref|YP_002015571.1| dimethyladenosine transferase [Prosthecochloris aestuarii DSM 271]
gi|226732609|sp|B4S787.1|RSMA_PROA2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|194311529|gb|ACF45924.1| dimethyladenosine transferase [Prosthecochloris aestuarii DSM 271]
Length = 261
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 122/225 (54%), Gaps = 11/225 (4%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQ+ LT++ + IV+ + I P D V+EIGPG G LT +LEV A+E D ++
Sbjct: 15 KKLGQNFLTDRNTIRKIVQSAEIQPGDHVVEIGPGFGALTSAILEVCPSFTAVEKDRKLA 74
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDL-----VVANIPYGISSPLVAKLVYGTK 120
+ + + +N++ D L+ +F + V+ NIPY I+SP++ KL+
Sbjct: 75 DFIREE------YPSVNLVESDILEVDFAKLAEEGPVKVMGNIPYSITSPILFKLLENRS 128
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
S TL++Q E A RL A+PG E+ LAV ++ DV ++ V K+ F P P+VDS+V
Sbjct: 129 HIISETLMMQHEVALRLAANPGTKEYGILAVQLQTFCDVRYLFKVGKKVFRPRPEVDSAV 188
Query: 181 VIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIEL 225
V I PK D E+R F R F ++ KTL KQ + +L
Sbjct: 189 VRIVPKKTPLDDCETEFRRFVRLAFQQRRKTLQNNLKQHYDISQL 233
>gi|312870255|ref|ZP_07730386.1| dimethyladenosine transferase [Lactobacillus oris PB013-T2-3]
gi|311094278|gb|EFQ52591.1| dimethyladenosine transferase [Lactobacillus oris PB013-T2-3]
Length = 297
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 126/225 (56%), Gaps = 17/225 (7%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I K GQ+ LT+ VL +IV + I DD V+EIGPG G LT +L + + +V A+EID
Sbjct: 22 IHTKKGFGQNFLTDLNVLKNIVSAAEITRDDNVIEIGPGIGALTEQLAQAAGEVLALEID 81
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFP-----QFD------LVVANIPYGISSP 110
+ ++ +L A +D + V+++D L+ P QF VVAN+PY I+SP
Sbjct: 82 QDLIPVLAEVLAP---YDNVTVLNQDVLQANLPELIKQQFTDPSRPIKVVANLPYYITSP 138
Query: 111 LVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDF 170
++ L+ + + +++QKE A+RL A PG ++ L + ++ E +VS+R F
Sbjct: 139 ILMNLLAAPVDWAAICVMMQKEVAQRLTAQPGTKQYGALTLAIEYQMTAEIAFNVSRRVF 198
Query: 171 LPCPKVDSSVVIIRPKA---EIPDVNLDEWRAFTRTCFSKKNKTL 212
+P P VDS++V++RP+ + N + F R CF+ + K+L
Sbjct: 199 VPAPNVDSAIVVLRPRTTPLPVQPFNKQKLFGFIRGCFAHRRKSL 243
>gi|417885246|ref|ZP_12529401.1| dimethyladenosine transferase [Lactobacillus oris F0423]
gi|341595901|gb|EGS38538.1| dimethyladenosine transferase [Lactobacillus oris F0423]
Length = 297
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 126/225 (56%), Gaps = 17/225 (7%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I K GQ+ LT+ VL +IV + I DD V+EIGPG G LT +L + + +V A+EID
Sbjct: 22 IHTKKGFGQNFLTDLNVLKNIVSAAEITRDDNVIEIGPGIGALTEQLAQAAGEVLALEID 81
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFP-----QFD------LVVANIPYGISSP 110
+ ++ +L A +D + V+++D L+ P QF VVAN+PY I+SP
Sbjct: 82 QDLIPVLAEVLAP---YDNVTVLNQDVLQANLPELIKQQFTDPSRPIKVVANLPYYITSP 138
Query: 111 LVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDF 170
++ L+ + + +++QKE A+RL A PG ++ L + ++ E +VS+R F
Sbjct: 139 ILMNLLAAPVDWAAICVMMQKEVAQRLTAQPGTKQYGALTLAIEYQMTAEIAFNVSRRVF 198
Query: 171 LPCPKVDSSVVIIRPKA---EIPDVNLDEWRAFTRTCFSKKNKTL 212
+P P VDS++V++RP+ + N + F R CF+ + K+L
Sbjct: 199 VPAPNVDSAIVVLRPRTTPLPVQPFNKQKLFGFIRGCFAHRRKSL 243
>gi|168177414|ref|ZP_02612078.1| dimethyladenosine transferase [Clostridium botulinum NCTC 2916]
gi|182671129|gb|EDT83103.1| dimethyladenosine transferase [Clostridium botulinum NCTC 2916]
Length = 275
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 134/223 (60%), Gaps = 13/223 (5%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+K+ GQ+ L ++ VL+ I+ + IN +DTV+EIGPG G LT +LLE +K++++IE+D
Sbjct: 14 FNKNLGQNFLIDESVLEDIIEGAEINKEDTVIEIGPGVGTLTKELLERAKEIYSIELDGD 73
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQF----DLV--VANIPYGISSPLVAKLVY 117
++ IL + ++ +I KDALK +F + D + VAN+PY +++P++++L+
Sbjct: 74 LIPILQEELKE---YNNFTLIHKDALKIDFNELMENKDSIKLVANLPYYVTTPIISRLLT 130
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
F+S T+++QKE A R+ A P E+ L V V+ + + + VS F+P PKVD
Sbjct: 131 EKCDFKSLTIMIQKEVAERINAEPNCKEYGSLTVLVQYYCNTKIIRKVSPNSFIPRPKVD 190
Query: 178 SSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTLGATFK 217
S V+ + +E P V + + F R+ F+ + KTL + K
Sbjct: 191 SIVIKLDRLSE-PRVRVKSQKLFFNVVRSSFNMRRKTLWNSLK 232
>gi|421836040|ref|ZP_16270634.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Clostridium botulinum CFSAN001627]
gi|409742176|gb|EKN41682.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Clostridium botulinum CFSAN001627]
Length = 278
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 134/223 (60%), Gaps = 13/223 (5%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+K+ GQ+ L ++ VL+ I+ + IN +DTV+EIGPG G LT +LLE +K++++IE+D
Sbjct: 17 FNKNLGQNFLIDESVLEDIIEGAEINKEDTVIEIGPGVGTLTKELLERAKEIYSIELDGD 76
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQF----DLV--VANIPYGISSPLVAKLVY 117
++ IL + ++ +I KDALK +F + D + VAN+PY +++P++++L+
Sbjct: 77 LIPILQEELKE---YNNFTLIHKDALKIDFNELMENKDSIKLVANLPYYVTTPIISRLLT 133
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
F+S T+++QKE A R+ A P E+ L V V+ + + + VS F+P PKVD
Sbjct: 134 EKCDFKSLTIMIQKEVAERINAEPNCKEYGSLTVLVQYYCNTKIIRKVSPNSFIPRPKVD 193
Query: 178 SSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTLGATFK 217
S V+ + +E P V + + F R+ F+ + KTL + K
Sbjct: 194 SIVIKLDRLSE-PRVRVKSQKLFFNVVRSSFNMRRKTLWNSLK 235
>gi|118445093|ref|YP_879149.1| dimethyladenosine transferase [Clostridium novyi NT]
gi|118135549|gb|ABK62593.1| dimethyladenosine transferase [Clostridium novyi NT]
Length = 281
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/224 (36%), Positives = 127/224 (56%), Gaps = 15/224 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ LT+Q VLD IV S++ +D V+EIGPG G LT +LL+ +KKV A+E+D
Sbjct: 17 FTKSLGQNFLTDQNVLDDIVNGSNVCEEDFVIEIGPGVGTLTKELLKKAKKVCAVELDSE 76
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFD------LVVANIPYGISSPLVAKLVY 117
++ IL D +I KDALK +F + VVAN+PY +++P++A+L+
Sbjct: 77 LIPILTEELKD---FPNFELIHKDALKVDFNELIGEEKSVKVVANLPYYVTTPIIARLLK 133
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
F+S T+++QKE A R+ + P E+ L++ V+ D E + V F+P PKVD
Sbjct: 134 EGYKFKSLTIMIQKEVAERIASEPNCKEYGALSILVQYYCDTEILRKVPPTCFIPQPKVD 193
Query: 178 SSVVII----RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
S ++ + P+ ++ D L + R F+ + KTL K
Sbjct: 194 SIIIKLDRLDEPRVKVKDEEL--FFKIVRQSFNMRRKTLRNAIK 235
>gi|390441516|ref|ZP_10229581.1| Ribosomal RNA small subunit methyltransferase A [Microcystis sp.
T1-4]
gi|389835156|emb|CCI33707.1| Ribosomal RNA small subunit methyltransferase A [Microcystis sp.
T1-4]
Length = 268
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 119/186 (63%), Gaps = 11/186 (5%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQH L ++ +LD I+ +++ +D VLEIGPGTG LT +LL+ ++ V A+EID + IL
Sbjct: 10 GQHWLKDESILDRIIGAANLQSEDRVLEIGPGTGILTRRLLDGAQLVVAVEIDRDLWTIL 69
Query: 69 NRRAADSGFHDRLNVISKD--ALKTE-FPQFDLVVANIPYGISSPLVAKLVYG-----TK 120
N++ G D ++I D +LK E P + VVANIPY I+ P++ KL+ T
Sbjct: 70 NKKF---GQQDNFHLIPGDFLSLKPEQLPPVNKVVANIPYNITGPILEKLLGSIAHPFTP 126
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
++S TLL+QKE A RL+A P ++ L+V ++ +AD +++ DV +R F P P+VDS+V
Sbjct: 127 PYQSITLLVQKEVAERLVAVPSSKAYSALSVRIQYLADCQWICDVPRRAFSPPPQVDSAV 186
Query: 181 VIIRPK 186
+ + P+
Sbjct: 187 IQLLPR 192
>gi|229551483|ref|ZP_04440208.1| dimethyladenosine transferase [Lactobacillus rhamnosus LMS2-1]
gi|258540770|ref|YP_003175269.1| dimethyladenosine transferase [Lactobacillus rhamnosus Lc 705]
gi|385836481|ref|YP_005874256.1| dimethyladenosine transferase [Lactobacillus rhamnosus ATCC 8530]
gi|229315166|gb|EEN81139.1| dimethyladenosine transferase [Lactobacillus rhamnosus LMS2-1]
gi|257152446|emb|CAR91418.1| Dimethyladenosine transferase [Lactobacillus rhamnosus Lc 705]
gi|355395973|gb|AER65403.1| dimethyladenosine transferase [Lactobacillus rhamnosus ATCC 8530]
Length = 294
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 127/223 (56%), Gaps = 17/223 (7%)
Query: 4 FH--KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
FH K GQ+ LT+ ++L IV + ++ D V+EIGPG G LT L + + +V A+EID
Sbjct: 20 FHMRKGLGQNFLTDPQILQKIVAAADVSEQDDVIEIGPGIGALTQFLADQAHQVVALEID 79
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPYGISSPL 111
+R++ IL AD + V+++D LKT + FD VVAN+PY I++P+
Sbjct: 80 DRLLPILAETLAD---YPNTTVVNEDVLKTNLTELVATHFDGNHTLKVVANLPYYITTPI 136
Query: 112 VAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFL 171
+ L+ S T+++QKE A RL A+PG ++ L++ V+LVADV VS+ F+
Sbjct: 137 LLHLLRAHLPLHSMTVMMQKEVAARLSATPGSKDYGSLSIAVQLVADVATAFTVSRHAFV 196
Query: 172 PCPKVDSSVVII--RPKAEIPDVNLDEWRAFTRTCFSKKNKTL 212
P P VDS++V + RP+ N D + R F+ + KTL
Sbjct: 197 PAPNVDSAIVTLTQRPEPLAAVKNPDSFDRLVRGAFASRRKTL 239
>gi|259501903|ref|ZP_05744805.1| dimethyladenosine transferase [Lactobacillus antri DSM 16041]
gi|259170080|gb|EEW54575.1| dimethyladenosine transferase [Lactobacillus antri DSM 16041]
Length = 297
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 128/225 (56%), Gaps = 17/225 (7%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I K GQ+ LT+ VL +IV + I+ DD V+EIGPG G LT +L + + +V A+EID
Sbjct: 22 IHTKKGFGQNFLTDLNVLKNIVSAAEISKDDNVIEIGPGIGALTEQLAQAAGEVLALEID 81
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFP-----QFD------LVVANIPYGISSP 110
+ ++ +L A +D + V+++D L+ P QF VVAN+PY I+SP
Sbjct: 82 QDLIPVLAEVLAP---YDNVTVLNQDVLQANLPELIKQQFADPAKPVKVVANLPYYITSP 138
Query: 111 LVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDF 170
++ L+ + + +++QKE A+RL A PG ++ L + ++ E +VS+R F
Sbjct: 139 ILMNLLAAPVDWAAICVMMQKEVAQRLTAQPGTKQYGALTLAIEYQMTAEIAFNVSRRVF 198
Query: 171 LPCPKVDSSVVIIRPKA---EIPDVNLDEWRAFTRTCFSKKNKTL 212
+P P VDS++V+++P+A + + + F R CF+ + K+L
Sbjct: 199 VPAPNVDSAIVVLKPRATPLAVEPFDKQKLFGFIRACFAHRRKSL 243
>gi|282163396|ref|YP_003355781.1| probable dimethyladenosine transferase [Methanocella paludicola
SANAE]
gi|282155710|dbj|BAI60798.1| probable dimethyladenosine transferase [Methanocella paludicola
SANAE]
Length = 276
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 128/213 (60%), Gaps = 7/213 (3%)
Query: 1 YIFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEI 60
+I K K QH L + +L IV + I+ D+ VLEIG G GNLT L + ++ V+ IE+
Sbjct: 10 FIAPDKRKDQHFLIDLNILKKIVAIADIHKDEDVLEIGTGPGNLTELLAQKARHVYTIEM 69
Query: 61 DERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTK 120
D +V +L + S + +I +ALK EFP+FD VVAN+PY ISS + KL+
Sbjct: 70 DPALVALLEEKFKGSN----VTIIKGNALKVEFPRFDKVVANLPYSISSDVTFKLL--KN 123
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
+F+ L+ Q+EFA+R++A G+ +++RL+V+V+ ADVE +M V + F P P+V+S+V
Sbjct: 124 NFKLGILMYQREFAQRMIARVGEPDYSRLSVDVQHFADVEILMKVPPQAFSPPPEVESAV 183
Query: 181 VIIRPKAEIPDV-NLDEWRAFTRTCFSKKNKTL 212
V + P+ V + + A F+++ K L
Sbjct: 184 VRVTPRPAAYSVKDRALFMALVTAAFTQRRKRL 216
>gi|417925844|ref|ZP_12569259.1| dimethyladenosine transferase [Finegoldia magna
SY403409CC001050417]
gi|341590769|gb|EGS34000.1| dimethyladenosine transferase [Finegoldia magna
SY403409CC001050417]
Length = 283
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 131/219 (59%), Gaps = 9/219 (4%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K+ GQ+ L + ++++I+ S+I DD V+EIGPG G LT +L++ K +++IEID R
Sbjct: 22 FSKALGQNFLIDGNLIENIIDYSNITEDDYVIEIGPGFGTLTERLVDKCKFLYSIEIDSR 81
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL------VVANIPYGISSPLVAKLVY 117
++++L D D +I++D LK + + + VVAN+PY I++P++ L
Sbjct: 82 LMDVLKYTVGD---RDNFQIINEDVLKVDLNELNHEDKKFKVVANLPYYITTPIIEHLFN 138
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
S T+++QKE A R++A G ++ L++ VK +D + +++ K F+P PKVD
Sbjct: 139 YRDIIESITVMVQKEVANRMVADVGSKDYASLSLFVKQNSDAKIILNAPKTVFMPQPKVD 198
Query: 178 SSVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATF 216
S+VV ++ K D++ + R R+ FSK+ KT+ +F
Sbjct: 199 SAVVNMKLKKLDEDIDQELLRQLIRSGFSKRRKTILNSF 237
>gi|313125978|ref|YP_004036248.1| dimethyladenosine transferase [Halogeometricum borinquense DSM
11551]
gi|448285818|ref|ZP_21477057.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halogeometricum borinquense DSM 11551]
gi|312292343|gb|ADQ66803.1| dimethyladenosine transferase [Halogeometricum borinquense DSM
11551]
gi|445575848|gb|ELY30311.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halogeometricum borinquense DSM 11551]
Length = 289
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 120/212 (56%), Gaps = 15/212 (7%)
Query: 8 KGQHILTNQRVLDSIVRKSSINPDDT----VLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
+ QH L + RVLD I S P+DT VLE+G GTG LT +LL V+ +V +E D R
Sbjct: 34 QDQHFLVDDRVLDRI---PSYLPEDTDTSHVLEVGGGTGALTDRLLRVADRVTVVERDTR 90
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
+ E L AD+ DRL ++ DAL+ + P+F V+N+PYGISS + +L+
Sbjct: 91 LAEFLREEFADAIEADRLTILEGDALEIDLPEFTACVSNLPYGISSEITFRLLPRGVPL- 149
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
L+ QKEF R+ A G E+ RL+V+ + DVE V V K F P P V+S VV +
Sbjct: 150 --VLMFQKEFGERMAAETGTDEYGRLSVSAQHYGDVEVVETVPKEAFDPAPAVESVVVRV 207
Query: 184 RPKAEIPDVNLDE---WRAFTRTCFSKKNKTL 212
P+A PD +D+ + F + F+++ KT+
Sbjct: 208 TPRA--PDYEVDDEAFFLDFVKALFTQRRKTI 237
>gi|47157009|gb|AAT12376.1| putative dimethyladenosine transferase-like protein [Antonospora
locustae]
Length = 219
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 105/165 (63%), Gaps = 2/165 (1%)
Query: 54 KVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVA 113
K+ E D R+ L ++ + + + DAL+ FP FD+ ++NIPY ISSPL+
Sbjct: 1 KLVCYEKDTRLAAELVKKVSARHLSHKFELNVGDALRATFPPFDMCISNIPYQISSPLLF 60
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
KL+ + F+ A ++ Q+EFA+RL+A PG SE++RL+V V+L+A V VM+VS+ F+P
Sbjct: 61 KLL--QEDFKCAYIMFQREFAQRLIARPGCSEYSRLSVAVQLLAKVHNVMNVSRNSFVPP 118
Query: 174 PKVDSSVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
P VDSSVV I P+ P +N++E+ + CF +KNK L FK+
Sbjct: 119 PMVDSSVVRIEPRVPRPPINIEEFNRLLKICFLRKNKRLSGIFKR 163
>gi|339449357|ref|ZP_08652913.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Lactobacillus fructivorans KCTC 3543]
Length = 296
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 128/219 (58%), Gaps = 15/219 (6%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS GQ+ L + VL IV+ + I+ D V+EIGPG G LT ++ + + +V A EIDE ++
Sbjct: 26 KSLGQNFLNDLGVLKEIVQVADISTADDVIEIGPGIGALTEQIAQSAHEVMAFEIDENLL 85
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPYGISSPLVAKL 115
IL+ + ++ + VI++D L+ P+ FD+ VVAN+PY ++ P++ +
Sbjct: 86 PILDETLSP---YNNIKVINQDFLQANLPKLIKENFDVQHRLKVVANLPYYVTKPILMDI 142
Query: 116 VYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPK 175
+ G +F L++QKE A R+ A PG+ ++ L + + + +VE ++VS + F+P PK
Sbjct: 143 LKGNVNFDVTVLMMQKEVAERISAKPGNRDYGALTIITQYLENVEIAINVSAQSFIPSPK 202
Query: 176 VDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTL 212
VDSSVV + PK + V DE + F CF + KTL
Sbjct: 203 VDSSVVKLTPKQKRNMVAYDEKAFFGFAHGCFMHRRKTL 241
>gi|257076452|ref|ZP_05570813.1| dimethyladenosine transferase [Ferroplasma acidarmanus fer1]
Length = 239
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 119/211 (56%), Gaps = 4/211 (1%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K GQ L ++ + VR I P D VLEIGPG G LT LL K+ AIE D R
Sbjct: 5 FAKKYGQVFLNDKNIAAKEVRLLGIEPGDHVLEIGPGHGILTGILLSEPVKLTAIEPDHR 64
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
E L D + N+I + L TE FD ++ NIPY ISSP++ K++ +F+
Sbjct: 65 FYESLKISYHDHIVSGKFNIIKESFLDTEPSYFDHIIGNIPYNISSPVLFKIL--DFNFK 122
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
S+ L++QKEFARRL+A PG E++R+ +N + + ++ + +V+++ F P P VDS+V+ I
Sbjct: 123 SSILMVQKEFARRLVARPGTKEYSRITINTSVRSTIKILFNVTRKVFSPVPDVDSAVISI 182
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGA 214
K D++L + F FS + K L
Sbjct: 183 MKKDV--DIDLANFDKFIAKIFSMRRKKLST 211
>gi|425471346|ref|ZP_18850206.1| Ribosomal RNA small subunit methyltransferase A [Microcystis
aeruginosa PCC 9701]
gi|389882782|emb|CCI36782.1| Ribosomal RNA small subunit methyltransferase A [Microcystis
aeruginosa PCC 9701]
Length = 268
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 118/186 (63%), Gaps = 11/186 (5%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQH L ++ +LD I+ +++ +D VLEIGPGTG LT +LL+ ++ V A+EID + IL
Sbjct: 10 GQHWLKDESILDRIIGAANLQSEDRVLEIGPGTGILTRRLLDGAQLVVAVEIDRDLWTIL 69
Query: 69 NRRAADSGFHDRLNVISKD--ALKTE-FPQFDLVVANIPYGISSPLVAKLVYG-----TK 120
N++ G D ++I D +LK E P + VVANIPY I+ P++ KL+ T
Sbjct: 70 NKKF---GQQDNFHLIPGDFLSLKLEQLPPVNKVVANIPYNITGPILEKLLGSIAHPFTP 126
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
+ S TLL+QKE A RL+A P ++ L+V ++ +AD +++ DV +R F P P+VDS+V
Sbjct: 127 PYHSITLLVQKEVAERLVAVPSTKAYSALSVRIQYLADCQWICDVPRRAFSPSPRVDSAV 186
Query: 181 VIIRPK 186
+ + P+
Sbjct: 187 IQLLPR 192
>gi|398853804|ref|ZP_10610396.1| dimethyladenosine transferase [Pseudomonas sp. GM80]
gi|398238421|gb|EJN24150.1| dimethyladenosine transferase [Pseudomonas sp. GM80]
Length = 272
Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 85/228 (37%), Positives = 123/228 (53%), Gaps = 16/228 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ HK++ GQ+ L + V+D I+R S PDD +LEIGPG G LT LL ++ +E
Sbjct: 5 YQHKARKRFGQNFLHDAGVIDRILRSISAKPDDRLLEIGPGQGALTAGLLNSGGQLDVVE 64
Query: 60 IDERMVEILNRR-AADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLV 112
+D+ ++ ILN++ A S F N+ DALK +F P VV N+PY IS+PL+
Sbjct: 65 LDKDLIPILNQQFAGKSNF----NLHQGDALKFDFNTLNAAPNSLRVVGNLPYNISTPLI 120
Query: 113 AKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
L+ R +LQKE RL A PG ++ RL++ V+ VE + +V F P
Sbjct: 121 FHLLNNAGIIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNP 180
Query: 173 CPKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFKQ 218
PKVDS++V + P A +P D R F+++ KTL T KQ
Sbjct: 181 PPKVDSAIVRLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNTLKQ 228
>gi|440755385|ref|ZP_20934587.1| dimethyladenosine transferase [Microcystis aeruginosa TAIHU98]
gi|440175591|gb|ELP54960.1| dimethyladenosine transferase [Microcystis aeruginosa TAIHU98]
Length = 268
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 119/186 (63%), Gaps = 11/186 (5%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQH L ++ +LD I+ +++ +D VLEIGPGTG LT +LL+ ++ V A+EID + IL
Sbjct: 10 GQHWLKDESILDRIIGAANLQSEDRVLEIGPGTGILTRRLLDGAQLVVAVEIDRDLWTIL 69
Query: 69 NRRAADSGFHDRLNVISKD--ALKTE-FPQFDLVVANIPYGISSPLVAKLVYG-----TK 120
N++ G D ++I D +LK E P + VVANIPY I+ P++ KL+ T
Sbjct: 70 NKKF---GQQDNFHLIPGDFLSLKPEQLPPVNKVVANIPYNITGPILEKLLGSIAHPFTP 126
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
++S TLL+QKE A RL+A P ++ L+V ++ +AD +++ DV +R F P P+VDS+V
Sbjct: 127 PYQSITLLVQKEVAERLVAVPSTKAYSALSVRIQYLADCQWICDVPRRAFSPPPRVDSAV 186
Query: 181 VIIRPK 186
+ + P+
Sbjct: 187 IQLLPR 192
>gi|304315447|ref|YP_003850594.1| dimethyladenosine transferase [Methanothermobacter marburgensis
str. Marburg]
gi|302588906|gb|ADL59281.1| predicted dimethyladenosine transferase [Methanothermobacter
marburgensis str. Marburg]
Length = 273
Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 125/216 (57%), Gaps = 7/216 (3%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
+S GQ+ L + I+ ++ PDD VLEIG G G LTL + E++ V AIE D +
Sbjct: 21 RSLGQNYLVDDGKRQRILGYGNLGPDDHVLEIGAGIGTLTLPMAELAGHVTAIESDPFIA 80
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSA 125
IL AD D +++I DALK +FP F+ VV+N+PY ISSP+ +L+ F
Sbjct: 81 GIL----ADRIKGDNVDIIVGDALKVDFPAFNKVVSNLPYQISSPVTFRLL--RHEFELG 134
Query: 126 TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP 185
L+ QKEFA R++A PG +++RL+V + +A+V+ V + F P P+VDS+VV +RP
Sbjct: 135 VLMYQKEFAARMVAEPGTRDYSRLSVMLHFLAEVQIVDYLKPGCFFPRPRVDSAVVTVRP 194
Query: 186 KA-EIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKK 220
+P + D RA + K +K+L +F + K
Sbjct: 195 TGFSLPALFEDVCRALFQHRKKKTSKSLRESFHEIK 230
>gi|425435045|ref|ZP_18815505.1| Ribosomal RNA small subunit methyltransferase A [Microcystis
aeruginosa PCC 9432]
gi|389675218|emb|CCH95619.1| Ribosomal RNA small subunit methyltransferase A [Microcystis
aeruginosa PCC 9432]
Length = 268
Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 119/186 (63%), Gaps = 11/186 (5%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQH L ++ +LD I+ +++ +D VLEIGPGTG LT +LL+ ++ V A+EID + IL
Sbjct: 10 GQHWLKDESILDRIIGAANLQSEDRVLEIGPGTGILTRRLLDGAQLVVAVEIDRDLWTIL 69
Query: 69 NRRAADSGFHDRLNVISKD--ALKTE-FPQFDLVVANIPYGISSPLVAKLVYG-----TK 120
N++ G D ++I D +LK E P + VVANIPY I+ P++ KL+ T
Sbjct: 70 NKKF---GQQDNFHLIPGDFLSLKPEQLPPVNKVVANIPYNITGPILEKLLGSIAHPFTP 126
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
++S TLL+QKE A RL+A P ++ L+V ++ +AD +++ DV +R F P P+VDS+V
Sbjct: 127 PYQSITLLVQKEVAERLVAVPSTKAYSALSVRIQYLADCQWICDVPRRAFSPPPRVDSAV 186
Query: 181 VIIRPK 186
+ + P+
Sbjct: 187 IQLLPR 192
>gi|385811902|ref|YP_005848293.1| dimethyladenosine transferase [Lactobacillus fermentum CECT 5716]
gi|299782801|gb|ADJ40799.1| Dimethyladenosine transferase [Lactobacillus fermentum CECT 5716]
Length = 295
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 128/232 (55%), Gaps = 21/232 (9%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I K GQ+ LTN VL IVR + I DD V+EIGPG G LT KL + + +V A+EID
Sbjct: 20 IHAKKGFGQNFLTNPDVLSGIVRAAGITKDDNVIEIGPGIGALTEKLAQAAGEVVALEID 79
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLV-------------VANIPYGIS 108
E ++ +L+ A G + V+++D LK DLV VAN+PY I+
Sbjct: 80 ESLLPVLDDVLAPYG---NVTVLNQDVLKANLA--DLVQTAFKDPTKPVKVVANLPYYIT 134
Query: 109 SPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKR 168
SP++ L+ + + +++QKE A RL+A PG ++ L + + DV+ +VS++
Sbjct: 135 SPILFALLASQVEWAAVCVMMQKEVADRLVAKPGTKDYGALTLAIDYRMDVKVAFNVSRK 194
Query: 169 DFLPCPKVDSSVVIIRPK-AEIPDVNLDEWRAFT--RTCFSKKNKTLGATFK 217
F+P P VDS++V++ K A +P +E R F R CF+ + K+L K
Sbjct: 195 SFVPAPNVDSAIVVLTQKSAALPVSPFNEDRLFCLIRGCFAHRRKSLWNNLK 246
>gi|116754303|ref|YP_843421.1| dimethyladenosine transferase [Methanosaeta thermophila PT]
gi|116665754|gb|ABK14781.1| dimethyladenosine transferase [Methanosaeta thermophila PT]
Length = 249
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 119/202 (58%), Gaps = 8/202 (3%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQH LT++ + + I + I+P D +LEIGPG G+LT L + +V+AIE D +
Sbjct: 4 GQHFLTDRGIAERIAGYAEISPSDRILEIGPGKGSLTEFLAARAGRVYAIEADPELA--- 60
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
R + F + + VI DAL+ + P+++ VV+N+PY IS+ + +L+ F L+
Sbjct: 61 --RYVEESFPN-VEVIQGDALRVDLPEYNKVVSNLPYHISTKITLRLL--RNPFDLMVLM 115
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
Q+EF R+LASPG E+ RL+VNV ADVE + V + F P P V SSVV +RP+ +
Sbjct: 116 YQREFVERMLASPGSREYGRLSVNVSYYADVEVLETVPRSAFRPMPHVSSSVVRLRPRRD 175
Query: 189 IPDVNLDEWRAFTRTCFSKKNK 210
V+ + + +R F+K+ K
Sbjct: 176 RELVDELIFSSISRDLFTKRRK 197
>gi|373458219|ref|ZP_09549986.1| Ribosomal RNA small subunit methyltransferase A [Caldithrix abyssi
DSM 13497]
gi|371719883|gb|EHO41654.1| Ribosomal RNA small subunit methyltransferase A [Caldithrix abyssi
DSM 13497]
Length = 262
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 131/222 (59%), Gaps = 16/222 (7%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV-SKKVHAIEIDERMVEI 67
Q+ LTN IV +I P+D V+EIGPG G LT +L+++ S++ IEID RMVE
Sbjct: 8 SQNFLTNPFYQQKIVDALNIEPEDVVVEIGPGQGALTQRLVQIPSQRCIVIEIDRRMVEH 67
Query: 68 LNRRAADSGFHDRLNVISKDALKTEFPQFD-----LVVANIPYGISSPLVAKLVYGTKSF 122
L+ R F ++ +I++D L +F ++ N+PY I+SP++ L+ +
Sbjct: 68 LDDR-----FGQQIKIINQDVLTVDFCALADGKPLKIIGNLPYHITSPILFHLIDHYQCV 122
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
A L+ QKE ARR+ ASPG+ ++ L+V + A+++++ ++ + +F P P VDS+V+
Sbjct: 123 AQAVLMTQKEVARRISASPGNKDYGILSVITRAYAEIDYLFEIKRGNFFPTPAVDSAVIS 182
Query: 183 IRPKAEIPDV-NLDEWRAFTRTCFSKKNKT----LGATFKQK 219
++ EI D+ NLD +R R+ F+ + KT LG F++K
Sbjct: 183 LKFFKEIKDIQNLDLFRKIVRSAFNFRRKTLKNSLGRIFEEK 224
>gi|118587313|ref|ZP_01544740.1| dimethyladenosine transferase [Oenococcus oeni ATCC BAA-1163]
gi|421189200|ref|ZP_15646519.1| dimethyladenosine transferase [Oenococcus oeni AWRIB422]
gi|421191841|ref|ZP_15649111.1| dimethyladenosine transferase [Oenococcus oeni AWRIB548]
gi|118432302|gb|EAV39041.1| dimethyladenosine transferase [Oenococcus oeni ATCC BAA-1163]
gi|399970662|gb|EJO04953.1| dimethyladenosine transferase [Oenococcus oeni AWRIB548]
gi|399973957|gb|EJO08121.1| dimethyladenosine transferase [Oenococcus oeni AWRIB422]
Length = 292
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 122/190 (64%), Gaps = 10/190 (5%)
Query: 4 FHKSK--GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
H SK GQ+ L + VL IV+ ++I PDDTV+EIGPG G+LT +L + +K+V A EID
Sbjct: 22 LHASKRLGQNFLIDLNVLQEIVQGAAIGPDDTVIEIGPGIGSLTEQLAKAAKQVVAYEID 81
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL-----VVANIPYGISSPLVAKLV 116
++++ IL+ + + ++++D LK +F F +VAN+PY I++P++ L+
Sbjct: 82 KKLIPILSETLRP---YKNVEIVNRDILKADFSIFAKNQSLKIVANLPYYITTPILFYLL 138
Query: 117 YGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKV 176
+ +F+S T+++QKE A RL A G ++ L++ ++ +VE ++ V+++ F+P P V
Sbjct: 139 NSSLNFKSVTVMMQKEVAARLQAGVGSKDYGELSLAIQYRVNVEIILPVTRKSFMPSPNV 198
Query: 177 DSSVVIIRPK 186
DS+VV + PK
Sbjct: 199 DSAVVQLTPK 208
>gi|428304802|ref|YP_007141627.1| dimethyladenosine transferase [Crinalium epipsammum PCC 9333]
gi|428246337|gb|AFZ12117.1| dimethyladenosine transferase [Crinalium epipsammum PCC 9333]
Length = 291
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 124/228 (54%), Gaps = 19/228 (8%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQH L +++ LD+I+ + ++ D VLEIGPG G LT KLL + A+EID +
Sbjct: 7 KQFGQHWLRSEKALDNIIAAAELSEGDRVLEIGPGQGVLTRKLLPKVQSAVAVEIDRDLC 66
Query: 66 EILNRRAADSGFHDRLNVISKDALKTE-------FPQF---DLVVANIPYGISSPLVAKL 115
++L A G+ D+ ++ D L + FP F + VVANIPY I+ P++ KL
Sbjct: 67 KVL---AQKIGYFDKFLLLQGDILTLDLPAHLASFPNFQNLNKVVANIPYNITGPILEKL 123
Query: 116 VYGTKSFRSA-----TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDF 170
+ + SA LL+QKE A RL A PG F L+V V+ +A+ E + V RDF
Sbjct: 124 LGRIATPASAPYDLIVLLVQKEVAERLYAKPGSRAFGALSVRVQYLAECELICSVPARDF 183
Query: 171 LPCPKVDSSVVIIRPKAEIPDVN-LDEWRAFTRTCFSKKNKTLGATFK 217
P PKVDS+VV +RP+ P N + + R F++K K L K
Sbjct: 184 YPPPKVDSAVVRLRPRQFEPQANDAKKLESLVRLGFAEKRKMLRNNLK 231
>gi|290891124|ref|ZP_06554186.1| hypothetical protein AWRIB429_1576 [Oenococcus oeni AWRIB429]
gi|419758303|ref|ZP_14284620.1| dimethyladenosine transferase [Oenococcus oeni AWRIB304]
gi|419856510|ref|ZP_14379231.1| dimethyladenosine transferase [Oenococcus oeni AWRIB202]
gi|419859330|ref|ZP_14381985.1| dimethyladenosine transferase [Oenococcus oeni DSM 20252 =
AWRIB129]
gi|421184694|ref|ZP_15642110.1| dimethyladenosine transferase [Oenococcus oeni AWRIB318]
gi|421188279|ref|ZP_15645618.1| dimethyladenosine transferase [Oenococcus oeni AWRIB419]
gi|421192703|ref|ZP_15649956.1| dimethyladenosine transferase [Oenococcus oeni AWRIB553]
gi|421195017|ref|ZP_15652229.1| dimethyladenosine transferase [Oenococcus oeni AWRIB568]
gi|421196887|ref|ZP_15654068.1| dimethyladenosine transferase [Oenococcus oeni AWRIB576]
gi|290479088|gb|EFD87750.1| hypothetical protein AWRIB429_1576 [Oenococcus oeni AWRIB429]
gi|399904925|gb|EJN92376.1| dimethyladenosine transferase [Oenococcus oeni AWRIB304]
gi|399965836|gb|EJO00402.1| dimethyladenosine transferase [Oenococcus oeni AWRIB419]
gi|399966296|gb|EJO00845.1| dimethyladenosine transferase [Oenococcus oeni AWRIB318]
gi|399974281|gb|EJO08444.1| dimethyladenosine transferase [Oenococcus oeni AWRIB553]
gi|399976206|gb|EJO10232.1| dimethyladenosine transferase [Oenococcus oeni AWRIB576]
gi|399976801|gb|EJO10814.1| dimethyladenosine transferase [Oenococcus oeni AWRIB568]
gi|410496879|gb|EKP88358.1| dimethyladenosine transferase [Oenococcus oeni DSM 20252 =
AWRIB129]
gi|410499555|gb|EKP90986.1| dimethyladenosine transferase [Oenococcus oeni AWRIB202]
Length = 292
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 122/190 (64%), Gaps = 10/190 (5%)
Query: 4 FHKSK--GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
H SK GQ+ L + VL IV+ ++I PDDTV+EIGPG G+LT +L + +K+V A EID
Sbjct: 22 LHASKRLGQNFLIDLNVLQEIVQGAAIGPDDTVIEIGPGIGSLTEQLAKAAKQVVAYEID 81
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL-----VVANIPYGISSPLVAKLV 116
++++ IL+ + + ++++D LK +F F +VAN+PY I++P++ L+
Sbjct: 82 KKLIPILSETLRP---YKNVKIVNRDILKADFSIFAKNQSLKIVANLPYYITTPILFYLL 138
Query: 117 YGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKV 176
+ +F+S T+++QKE A RL A G ++ L++ ++ +VE ++ V+++ F+P P V
Sbjct: 139 NSSLNFKSVTVMMQKEVAARLQAGVGSKDYGELSLAIQYRVNVEIILPVTRKSFMPSPNV 198
Query: 177 DSSVVIIRPK 186
DS+VV + PK
Sbjct: 199 DSAVVQLTPK 208
>gi|150014951|ref|YP_001307205.1| dimethyladenosine transferase [Clostridium beijerinckii NCIMB 8052]
gi|149901416|gb|ABR32249.1| dimethyladenosine transferase [Clostridium beijerinckii NCIMB 8052]
Length = 281
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 128/219 (58%), Gaps = 15/219 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + VLD IV + +N +D ++EIGPG G LT +LL +KKV +IE+D
Sbjct: 19 FSKSLGQNFLVDDSVLDDIVNGAEVNNEDFIIEIGPGVGTLTAQLLMKAKKVTSIELDND 78
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFD------LVVANIPYGISSPLVAKLVY 117
++ IL + + G H ++I KDALK +F + +VAN+PY +++P++ KL+
Sbjct: 79 LIPILEQ---ELGEHKNFSLIHKDALKVDFNELIGDEKSVKLVANLPYYVTTPIIVKLLK 135
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
G +F+S T+++QKE A R+ A P E+ L+V V+ + + + V F+P PKV+
Sbjct: 136 GGYNFKSLTIMIQKEVAERINAEPNCKEYGALSVLVQYYCNTDIIRKVPPTCFIPRPKVE 195
Query: 178 SSVV----IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTL 212
S V+ + P+ + D+N+ R F+ + KTL
Sbjct: 196 SIVIRLDRLDEPRVKTKDINI--MFEIVRAGFNMRRKTL 232
>gi|298675523|ref|YP_003727273.1| dimethyladenosine transferase [Methanohalobium evestigatum Z-7303]
gi|298288511|gb|ADI74477.1| dimethyladenosine transferase [Methanohalobium evestigatum Z-7303]
Length = 269
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 114/204 (55%), Gaps = 6/204 (2%)
Query: 10 QHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILN 69
QH L + L+ IV + + +DTVLEIG G GNLT K+ E K++A+E+D + +IL
Sbjct: 18 QHFLVDDNFLNQIVDSAELTENDTVLEIGAGIGNLTEKIAETVHKLYAVELDPNLCDILI 77
Query: 70 RRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLL 129
R AD +D + +I D L E P+F+ VVAN+PY ISS + KL+ F L+
Sbjct: 78 ERFAD---YDNVEIIEGDILDIELPEFNKVVANLPYSISSHITFKLL--KHEFELGILMY 132
Query: 130 QKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPK-AE 188
Q EFARR+++ +++RL V AD +M V + F P P+V S+VV + P+ A
Sbjct: 133 QYEFARRMVSPKNSKDYSRLTVTTNFFADASIIMKVPRSAFKPAPEVKSAVVKLIPRPAS 192
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTL 212
V+ D + F F ++ K L
Sbjct: 193 FDVVDEDFFLTFVTAVFGQRRKKL 216
>gi|124486386|ref|YP_001031002.1| dimethyladenosine transferase [Methanocorpusculum labreanum Z]
gi|124363927|gb|ABN07735.1| dimethyladenosine transferase [Methanocorpusculum labreanum Z]
Length = 258
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 119/216 (55%), Gaps = 4/216 (1%)
Query: 8 KGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEI 67
K QH L + +D I I TVLE+GPG G LT LLE V A+E+D ++
Sbjct: 5 KDQHFLIDTDAVDFIADSIPIQ-GRTVLEVGPGGGVLTAALLERGANVRAVELDGTLLPN 63
Query: 68 LNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATL 127
L +R + +L + DA + P +DLV+AN+PY ISS + +L+ F +A L
Sbjct: 64 LEQRFEEELSTGQLTITRGDASRVPLPAYDLVIANLPYSISSKITFRLL--ETGFETAVL 121
Query: 128 LLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP-K 186
+ Q EFA+R+++ PGD E+ RL+V V+ ADVE ++ + + F P P+VDS+VV I P +
Sbjct: 122 MYQWEFAKRMVSPPGDGEYGRLSVMVQTYADVELILKLPPQAFNPPPEVDSAVVKIIPHE 181
Query: 187 AEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKV 222
+ +N D R FS + KT+ K K +
Sbjct: 182 PPVKILNRDVHAVLVRELFSHRRKTIQNGLKGMKSI 217
>gi|297587466|ref|ZP_06946110.1| dimethyladenosine transferase [Finegoldia magna ATCC 53516]
gi|297574155|gb|EFH92875.1| dimethyladenosine transferase [Finegoldia magna ATCC 53516]
Length = 283
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 130/219 (59%), Gaps = 9/219 (4%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K+ GQ+ L + ++++I+ S I DD V+EIGPG G LT +L++ K +++IEID R
Sbjct: 22 FSKALGQNFLIDGNLIENIIDFSDITEDDYVIEIGPGFGTLTERLVDKCKFLYSIEIDSR 81
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL------VVANIPYGISSPLVAKLVY 117
++++L D D +I++D LK + + + VVAN+PY I++P++ L
Sbjct: 82 LMDVLKYTVGD---RDNFQIINEDVLKVDLNELNHGAKKFKVVANLPYYITTPIIEHLFN 138
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
S T+++QKE A R++A G ++ L++ VK +D + +++ K F+P PKVD
Sbjct: 139 YRDIIESITVMIQKEVANRMVADVGSKDYASLSLFVKQNSDAKIILNAPKTVFMPQPKVD 198
Query: 178 SSVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATF 216
S+VV ++ K D++ + R R+ FSK+ KT+ +F
Sbjct: 199 SAVVNMKLKKLDEDIDQELLRQLIRSGFSKRRKTIVNSF 237
>gi|11499372|ref|NP_070611.1| dimethyladenosine transferase [Archaeoglobus fulgidus DSM 4304]
gi|27151555|sp|O28491.1|RSMA_ARCFU RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|2648762|gb|AAB89464.1| dimethyladenosine transferase (ksgA) [Archaeoglobus fulgidus DSM
4304]
Length = 244
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 118/217 (54%), Gaps = 8/217 (3%)
Query: 5 HKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERM 64
KS GQH+L ++RV+ IV + ++ DD VLE+G GTGNLT LL V IE D M
Sbjct: 4 RKSLGQHMLVDRRVISRIVGYAELSEDDVVLEVGCGTGNLTSALLRKCS-VVGIEKDPLM 62
Query: 65 VEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRS 124
V+ L R +D R +I DALK +FP F VANIPY ISSPL KL+ FR
Sbjct: 63 VKRLRERFSDFIGKGRFRLIQGDALKVDFPYFTKFVANIPYKISSPLTFKLL--KTDFRL 120
Query: 125 ATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIR 184
A ++ Q+EFA RL E NRL V K E + V F P PKV+S++V I
Sbjct: 121 AVVMYQREFAERLCG-----EDNRLGVISKTYCKAEILEIVKPSSFNPPPKVESAIVRIV 175
Query: 185 PKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKK 221
P+ E+ N + + F FS + K +G ++ +K
Sbjct: 176 PEPEVFVENRELFEKFVTFAFSMRRKRMGKIVQEFRK 212
>gi|260663712|ref|ZP_05864600.1| dimethyladenosine transferase [Lactobacillus fermentum 28-3-CHN]
gi|260551763|gb|EEX24879.1| dimethyladenosine transferase [Lactobacillus fermentum 28-3-CHN]
Length = 295
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 128/232 (55%), Gaps = 21/232 (9%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I K GQ+ LTN VL IVR + I DD V+EIGPG G LT KL + + +V A+EID
Sbjct: 20 IHAKKGFGQNFLTNPDVLSGIVRAAGITKDDNVIEIGPGIGALTEKLAQAAGEVVALEID 79
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLV-------------VANIPYGIS 108
E ++ +L+ A G + V+++D LK DLV VAN+PY I+
Sbjct: 80 ESLLPVLDDVLAPYG---NVTVLNQDVLKANLA--DLVQTAFKDPTKPVKVVANLPYYIT 134
Query: 109 SPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKR 168
SP++ L+ + + +++QKE A RL+A PG ++ L + + DV+ +VS++
Sbjct: 135 SPILFALLASQVEWAAVCVMMQKEVADRLVAKPGTKDYGALTLAIDYRMDVKVAFNVSRK 194
Query: 169 DFLPCPKVDSSVVIIRPK-AEIPDVNLDEWRAF--TRTCFSKKNKTLGATFK 217
F+P P VDS++V++ K A +P +E R F R CF+ + K+L K
Sbjct: 195 SFVPAPNVDSAIVVLTQKSAALPVSPFNEDRLFGLIRGCFAHRRKSLWNNLK 246
>gi|184154665|ref|YP_001843005.1| dimethyladenosine transferase [Lactobacillus fermentum IFO 3956]
gi|227514301|ref|ZP_03944350.1| dimethyladenosine transferase [Lactobacillus fermentum ATCC 14931]
gi|183226009|dbj|BAG26525.1| dimethyladenosine transferase [Lactobacillus fermentum IFO 3956]
gi|227087349|gb|EEI22661.1| dimethyladenosine transferase [Lactobacillus fermentum ATCC 14931]
Length = 295
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 128/232 (55%), Gaps = 21/232 (9%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I K GQ+ LTN VL IVR + I DD V+EIGPG G LT KL + + +V A+EID
Sbjct: 20 IHAKKGFGQNFLTNPDVLSGIVRAAGITKDDNVIEIGPGIGALTEKLAQAAGEVVALEID 79
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLV-------------VANIPYGIS 108
E ++ +L+ A G + V+++D LK DLV VAN+PY I+
Sbjct: 80 ESLLPVLDDVLAPYG---NVTVLNQDVLKANLA--DLVQTAFKDPTKPVKVVANLPYYIT 134
Query: 109 SPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKR 168
SP++ L+ + + +++QKE A RL+A PG ++ L + + DV+ +VS++
Sbjct: 135 SPILFALLASQVEWAAVCVMMQKEVADRLVAKPGTKDYGALTLAIDYRMDVKVAFNVSRK 194
Query: 169 DFLPCPKVDSSVVIIRPK-AEIPDVNLDEWRAF--TRTCFSKKNKTLGATFK 217
F+P P VDS++V++ K A +P +E R F R CF+ + K+L K
Sbjct: 195 SFVPAPNVDSAIVVLTQKSAALPVSPFNEDRLFGLIRGCFAHRRKSLWNNLK 246
>gi|425466335|ref|ZP_18845638.1| Ribosomal RNA small subunit methyltransferase A [Microcystis
aeruginosa PCC 9809]
gi|389831207|emb|CCI26228.1| Ribosomal RNA small subunit methyltransferase A [Microcystis
aeruginosa PCC 9809]
Length = 268
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 119/186 (63%), Gaps = 11/186 (5%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQH L ++ +LD I+ +++ +D VLEIGPGTG LT +LL+ ++ V A+EID + IL
Sbjct: 10 GQHWLKDESILDRIIGAANLQSEDRVLEIGPGTGILTRRLLDGARLVVAVEIDRDLWTIL 69
Query: 69 NRRAADSGFHDRLNVISKD--ALKTE-FPQFDLVVANIPYGISSPLVAKLVYG-----TK 120
N++ G D ++I D +LK E P + VVANIPY I+ P++ +L+ T
Sbjct: 70 NKKF---GQQDNFHLIPGDFLSLKPEQLPPVNKVVANIPYNITGPILERLLGSIAHPFTP 126
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
++S TLL+QKE A RL+A P ++ L+V ++ +AD +++ DV +R F P P+VDS+V
Sbjct: 127 PYQSITLLVQKEVAERLVAVPSTKAYSALSVRIQYLADCQWICDVPRRAFSPPPQVDSAV 186
Query: 181 VIIRPK 186
+ + P+
Sbjct: 187 IQLLPR 192
>gi|421770168|ref|ZP_16206869.1| Dimethyladenosine transferase [Lactobacillus rhamnosus LRHMDP2]
gi|421772754|ref|ZP_16209407.1| Dimethyladenosine transferase [Lactobacillus rhamnosus LRHMDP3]
gi|411182696|gb|EKS49841.1| Dimethyladenosine transferase [Lactobacillus rhamnosus LRHMDP2]
gi|411183168|gb|EKS50308.1| Dimethyladenosine transferase [Lactobacillus rhamnosus LRHMDP3]
Length = 294
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 126/223 (56%), Gaps = 17/223 (7%)
Query: 4 FH--KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
FH K GQ+ LT+ ++L IV + ++ D V+EIGPG G LT L + + +V A+EID
Sbjct: 20 FHMRKGLGQNFLTDPQILQKIVAAADVSQQDDVIEIGPGIGALTQFLADQAHQVVALEID 79
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPYGISSPL 111
+R++ IL AD + V+++D LKT + FD VVAN+PY I++P+
Sbjct: 80 DRLLPILAETLAD---YPNTTVVNEDVLKTNLTELVATHFDGNHTLKVVANLPYYITTPI 136
Query: 112 VAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFL 171
+ L+ S T+++QKE A RL A+PG ++ L++ V+LVADV VS+ F+
Sbjct: 137 LLHLLRARLPLHSMTVMMQKEVAARLSAAPGSKDYGSLSIAVQLVADVATAFTVSRHAFV 196
Query: 172 PCPKVDSSVVII--RPKAEIPDVNLDEWRAFTRTCFSKKNKTL 212
P P VDS++V + RP+ N D + R F + KTL
Sbjct: 197 PAPNVDSAIVTLTQRPEPLAAVKNPDSFDRLVRGAFVSRRKTL 239
>gi|116491525|ref|YP_811069.1| dimethyladenosine transferase [Oenococcus oeni PSU-1]
gi|122276293|sp|Q04DR8.1|RSMA_OENOB RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|116092250|gb|ABJ57404.1| dimethyladenosine transferase [Oenococcus oeni PSU-1]
Length = 292
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 122/190 (64%), Gaps = 10/190 (5%)
Query: 4 FHKSK--GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
H SK GQ+ L + VL IV+ ++I PDDTV+EIGPG G+LT +L + +K+V A EID
Sbjct: 22 LHASKRLGQNFLIDLNVLQEIVQGAAIGPDDTVIEIGPGIGSLTEQLAKAAKQVVAYEID 81
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL-----VVANIPYGISSPLVAKLV 116
++++ IL+ + + ++++D LK +F F +VAN+PY I++P++ L+
Sbjct: 82 KKLIPILSETLRP---YKNVEIVNRDILKADFSIFAKNQSLKIVANLPYYITTPILFYLL 138
Query: 117 YGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKV 176
+ +F+S T+++QKE A RL A G ++ L++ ++ +VE ++ V+++ F+P P V
Sbjct: 139 NSSLNFKSVTVMMQKEVAARLQAGVGSKDYGELSLAIQYRVNVEIILPVTRKSFMPSPNV 198
Query: 177 DSSVVIIRPK 186
DS++V + PK
Sbjct: 199 DSAIVQLTPK 208
>gi|166363194|ref|YP_001655467.1| dimethyladenosine transferase [Microcystis aeruginosa NIES-843]
gi|166085567|dbj|BAG00275.1| dimethyladenosine transferase [Microcystis aeruginosa NIES-843]
Length = 268
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 118/186 (63%), Gaps = 11/186 (5%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQH L ++ +LD I+ +++ +D VLEIGPGTG LT +LL+ ++ V A+EID + IL
Sbjct: 10 GQHWLKDESILDRIIGAANLQSEDRVLEIGPGTGILTRRLLDGAQLVVAVEIDRDLWTIL 69
Query: 69 NRRAADSGFHDRLNVISKD--ALKTE-FPQFDLVVANIPYGISSPLVAKLVYG-----TK 120
N++ G D ++I D +LK E P + VVANIPY I+ P++ KL+ T
Sbjct: 70 NKKF---GQQDNFHLIPGDFLSLKPEQLPPVNKVVANIPYNITGPILEKLLGSIAHPFTP 126
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
++S TLL+QKE A RL+A P ++ L+V ++ +AD +++ DV R F P P+VDS+V
Sbjct: 127 PYQSITLLVQKEVAERLVAVPSTKAYSALSVRIQYLADCQWICDVPWRAFSPPPRVDSAV 186
Query: 181 VIIRPK 186
+ + P+
Sbjct: 187 IQLLPR 192
>gi|375090111|ref|ZP_09736430.1| dimethyladenosine transferase [Facklamia languida CCUG 37842]
gi|374566004|gb|EHR37259.1| dimethyladenosine transferase [Facklamia languida CCUG 37842]
Length = 299
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 125/224 (55%), Gaps = 15/224 (6%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS GQ+ L ++L +V + I TV+EIGPG G LT L +KKV++ EID+R V
Sbjct: 29 KSLGQNFLVEPKILQRMVEVAGITDQTTVIEIGPGIGALTEFLALEAKKVYSFEIDQRFV 88
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQF---DL-------VVANIPYGISSPLVAKL 115
EIL AD + + V+ +D LK + DL VVAN+PY I++P++ KL
Sbjct: 89 EILKETLAD---YSNVQVVGQDFLKVDLHDVVYQDLQTADRLVVVANLPYYITTPIIMKL 145
Query: 116 VYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPK 175
+ F+S +L+QKE A R+ AS G +N L + ++ + V ++ F+P P
Sbjct: 146 IESNLPFQSLVMLMQKEVAERMTASVGTKAYNSLTIAIQRTHEARLAFTVPRQVFIPKPN 205
Query: 176 VDSSVVII--RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
VDS+V+ + RP+A + + ++AF + CF+++ KTL K
Sbjct: 206 VDSAVLELRRRPQALVEVADPMAFQAFVQACFTQRRKTLWNNLK 249
>gi|398967697|ref|ZP_10682047.1| dimethyladenosine transferase [Pseudomonas sp. GM30]
gi|398144458|gb|EJM33290.1| dimethyladenosine transferase [Pseudomonas sp. GM30]
Length = 272
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 123/228 (53%), Gaps = 16/228 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ HK++ GQ+ L + V+D I+R S PDD +LEIGPG G LT +L ++ +E
Sbjct: 5 YQHKARKRFGQNFLHDAGVIDRILRSISAKPDDRMLEIGPGQGALTAGILNSGAQLDVVE 64
Query: 60 IDERMVEILNRR-AADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLV 112
+D+ ++ ILN++ A S F N+ DALK +F P VV N+PY IS+PL+
Sbjct: 65 LDKDLIPILNQQFAGKSNF----NLHQGDALKFDFNTLNAAPNSLRVVGNLPYNISTPLI 120
Query: 113 AKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
L+ R +LQKE RL A PG ++ RL++ V+ VE + +V F P
Sbjct: 121 FHLLNNAGIIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNP 180
Query: 173 CPKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFKQ 218
PKVDS++V + P A +P D R F+++ KTL T KQ
Sbjct: 181 PPKVDSAIVRLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNTLKQ 228
>gi|425440265|ref|ZP_18820571.1| Ribosomal RNA small subunit methyltransferase A [Microcystis
aeruginosa PCC 9717]
gi|389719341|emb|CCH96809.1| Ribosomal RNA small subunit methyltransferase A [Microcystis
aeruginosa PCC 9717]
Length = 268
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 115/186 (61%), Gaps = 11/186 (5%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQH L ++ +LD I+ + + +D VLEIGPGTG LT +LL+ ++ V A+EID + IL
Sbjct: 10 GQHWLKDESILDRIISAADLQSEDRVLEIGPGTGILTRRLLDGAQLVVAVEIDRYLWTIL 69
Query: 69 NRRAADSGFHDRLNVISKDAL---KTEFPQFDLVVANIPYGISSPLVAKLVYG-----TK 120
N++ G D ++I D L + P + VVANIPY I+ P++ KL+ T
Sbjct: 70 NKKF---GQQDNFHLIPGDFLTLKPEQLPPVNKVVANIPYNITGPILEKLLGSIAHPFTP 126
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
++S TLL+QKE A RL+A P ++ L+V ++ +AD ++ DV +R F P P+VDS+V
Sbjct: 127 PYQSITLLVQKEVAERLVAVPSTKAYSALSVRIQYLADCRWICDVPRRAFSPPPRVDSAV 186
Query: 181 VIIRPK 186
+ + P+
Sbjct: 187 IQLLPR 192
>gi|168187487|ref|ZP_02622122.1| dimethyladenosine transferase [Clostridium botulinum C str. Eklund]
gi|169294621|gb|EDS76754.1| dimethyladenosine transferase [Clostridium botulinum C str. Eklund]
Length = 281
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/224 (36%), Positives = 127/224 (56%), Gaps = 15/224 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ LT+Q VLD IV S++ +D V+EIGPG G LT +LL+ +K+V AIE+D
Sbjct: 17 FTKSLGQNFLTDQNVLDDIVNGSNVCEEDFVIEIGPGVGTLTKELLKKAKRVCAIELDSD 76
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFD------LVVANIPYGISSPLVAKLVY 117
++ IL D +I KDALK +F + VVAN+PY +++P++A+L+
Sbjct: 77 LIPILTEELKD---FPNFKLIHKDALKVDFNEIIGDEKSVKVVANLPYYVTTPIIARLLK 133
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
F+S T+++QKE A R+ + P E+ L++ V+ D E + V F+P PKVD
Sbjct: 134 EGYKFKSLTIMIQKEVAERIASEPNCKEYGALSILVQYYCDTEILRKVPPTCFIPQPKVD 193
Query: 178 SSVVII----RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
S ++ + P+ ++ D L + R F+ + KTL K
Sbjct: 194 SIIIKLDRLDEPRVKVKDKEL--FFKIVRQSFNMRRKTLRNAIK 235
>gi|418071100|ref|ZP_12708374.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Lactobacillus rhamnosus R0011]
gi|423080252|ref|ZP_17068877.1| dimethyladenosine transferase [Lactobacillus rhamnosus ATCC 21052]
gi|357538594|gb|EHJ22614.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Lactobacillus rhamnosus R0011]
gi|357543317|gb|EHJ25348.1| dimethyladenosine transferase [Lactobacillus rhamnosus ATCC 21052]
Length = 294
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/223 (36%), Positives = 126/223 (56%), Gaps = 17/223 (7%)
Query: 4 FH--KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
FH K GQ+ LT+ ++L IV + ++ D V+EIGPG G LT L + + +V A+EID
Sbjct: 20 FHMRKGLGQNFLTDPQILQKIVAAADVSQQDDVIEIGPGIGALTQFLADQAHQVVALEID 79
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPYGISSPL 111
+R++ IL D + V+++D LKT + FD VVAN+PY I++P+
Sbjct: 80 DRLLPILAETLTD---YPNTTVVNEDVLKTNLTELVATHFDGKHTLKVVANLPYYITTPI 136
Query: 112 VAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFL 171
+ L+ S T+++QKE A RL A+PG ++ L++ V+LVADV VS+ F+
Sbjct: 137 LLHLLQARLPLHSMTVMMQKEVAARLSATPGSKDYGSLSIAVQLVADVTTAFTVSRHAFV 196
Query: 172 PCPKVDSSVVII--RPKAEIPDVNLDEWRAFTRTCFSKKNKTL 212
P P VDS++V + RP+ N D + R F+ + KTL
Sbjct: 197 PAPNVDSAIVTLTQRPEPLAAVKNPDSFDRLVRGAFASRRKTL 239
>gi|169824244|ref|YP_001691855.1| dimethyladenosine transferase [Finegoldia magna ATCC 29328]
gi|167831049|dbj|BAG07965.1| dimethyladenosine transferase [Finegoldia magna ATCC 29328]
Length = 283
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 130/219 (59%), Gaps = 9/219 (4%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + ++++I+ S I DD V+EIGPG G LT +L++ K +++IEID R
Sbjct: 22 FSKSLGQNFLIDGNLIENIIDYSDITEDDYVIEIGPGFGTLTERLVDKCKFLYSIEIDSR 81
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL------VVANIPYGISSPLVAKLVY 117
++++L D + +I++D LK + + + VVAN+PY I++P++ L
Sbjct: 82 LMDVLKYTVGD---RENFKIINEDVLKVDLNELNHEDKKFKVVANLPYYITTPIIEHLFN 138
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
S T+++QKE A R++A G ++ L++ VK +D + +++ K F+P PKVD
Sbjct: 139 YRDIIESITVMVQKEVANRMVADVGSKDYASLSLFVKQNSDAKIILNAPKTVFMPQPKVD 198
Query: 178 SSVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATF 216
S+VV ++ K D++ + R R+ FSK+ KT+ +F
Sbjct: 199 SAVVNMKLKKLDEDIDQELLRQLIRSGFSKRRKTILNSF 237
>gi|153940692|ref|YP_001389445.1| dimethyladenosine transferase [Clostridium botulinum F str.
Langeland]
gi|384460533|ref|YP_005673128.1| dimethyladenosine transferase [Clostridium botulinum F str. 230613]
gi|259494245|sp|A7G9I5.1|RSMA_CLOBL RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|152936588|gb|ABS42086.1| dimethyladenosine transferase [Clostridium botulinum F str.
Langeland]
gi|295317550|gb|ADF97927.1| dimethyladenosine transferase [Clostridium botulinum F str. 230613]
Length = 275
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 133/223 (59%), Gaps = 13/223 (5%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+K+ GQ+ L ++ VL+ I+ + I+ +DTV+EIGPG G LT +LLE +K+V++IE+D
Sbjct: 14 FNKNLGQNFLIDESVLEDIIEGAEISKEDTVIEIGPGVGTLTKELLERAKEVYSIELDGD 73
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL------VVANIPYGISSPLVAKLVY 117
++ IL + ++ +I KDALK +F + +VAN+PY +++P++++L+
Sbjct: 74 LIPILQEELKE---YNNFTLIHKDALKIDFNELMENKESIKLVANLPYYVTTPIISRLLT 130
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
F+S T+++QKE A R+ A P E+ L V V+ + + + VS F+P PKVD
Sbjct: 131 EKCDFKSLTIMIQKEVAERINAEPNCKEYGSLTVLVQYYCNTKIIRKVSPNSFIPRPKVD 190
Query: 178 SSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTLGATFK 217
S V+ + +E P V + + F R+ F+ + KTL + K
Sbjct: 191 SIVIKLDRLSE-PRVRVKSQKLFFNVVRSSFNMRRKTLWNSLK 232
>gi|409350932|ref|ZP_11233871.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
equicursoris CIP 110162]
gi|407877088|emb|CCK85929.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
equicursoris CIP 110162]
Length = 293
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 126/232 (54%), Gaps = 15/232 (6%)
Query: 1 YIFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEI 60
++ K+ GQ+ L + + I + I D V+EIGPG G+LT +LL KV A E+
Sbjct: 21 FVRAKKNLGQNFLVDLNAVQGIAEAAGIQEGDQVIEIGPGIGSLTEQLLLYGGKVFAYEV 80
Query: 61 DERMVEILN----RRAADSGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPYG 106
D+ + EIL +R R ++ KD LK F + FDL VVAN+PY
Sbjct: 81 DDSLPEILETELPQRIDGEPLSSRFKLVLKDVLKANFAEDLAGFFDLTKPVKVVANLPYY 140
Query: 107 ISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVS 166
I++P++ L+ +F S TL++QKE A RL A PG+ ++ L + V+ V+ ++V
Sbjct: 141 ITTPIIFSLLESGLNFTSLTLMMQKEVADRLAAGPGNKDYGPLTIAVQTRMAVDLALNVG 200
Query: 167 KRDFLPCPKVDSSVVIIRPKAEIPDV-NLDEWRAFTRTCFSKKNKTLGATFK 217
F+P PKVDS+VV++ P DV + +++ + CF+++ KTL K
Sbjct: 201 HASFMPQPKVDSAVVVLTPLKTPVDVGDPEKFNRLVKLCFAQRRKTLSNNLK 252
>gi|187777327|ref|ZP_02993800.1| hypothetical protein CLOSPO_00879 [Clostridium sporogenes ATCC
15579]
gi|187774255|gb|EDU38057.1| dimethyladenosine transferase [Clostridium sporogenes ATCC 15579]
Length = 278
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 133/223 (59%), Gaps = 13/223 (5%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+K+ GQ+ L ++ VL+ I+ + I+ +DTV+EIGPG G LT +LLE +K+V++IE+D
Sbjct: 17 FNKNLGQNFLVDESVLEDIIEGAEISKEDTVIEIGPGVGTLTKELLEKAKEVYSIELDGD 76
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQF----DLV--VANIPYGISSPLVAKLVY 117
++ IL + ++ +I KDALK +F D + VAN+PY +++P++++L+
Sbjct: 77 LIPILKEELKE---YNNFTLIHKDALKIDFNGLMENKDSIKLVANLPYYVTTPIISRLLT 133
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
F+S T+++QKE A R+ A P E+ L V V+ D + + VS F+P PKVD
Sbjct: 134 EKCDFKSLTIMIQKEVAERINAEPNCKEYGSLTVLVQYYCDTKIIRKVSPNCFIPRPKVD 193
Query: 178 SSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTLGATFK 217
S V+ + +E P V + + F R+ F+ + KTL + K
Sbjct: 194 SIVIKLDKLSE-PRVKVKSEKLFFNVVRSSFNMRRKTLWNSLK 235
>gi|170761464|ref|YP_001785410.1| dimethyladenosine transferase [Clostridium botulinum A3 str. Loch
Maree]
gi|259494246|sp|B1KRY8.1|RSMA_CLOBM RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|169408453|gb|ACA56864.1| dimethyladenosine transferase [Clostridium botulinum A3 str. Loch
Maree]
Length = 275
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 134/223 (60%), Gaps = 13/223 (5%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+K+ GQ+ L ++ VL+ I++ + I+ +DTV+EIGPG G LT +LLE +K+V++IE+D
Sbjct: 14 FNKNLGQNFLVDESVLEDIIKGAEISKEDTVIEIGPGVGTLTKELLERAKEVYSIELDGD 73
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQF----DLV--VANIPYGISSPLVAKLVY 117
++ IL + ++ +I KDALK +F D + VAN+PY +++P++++L+
Sbjct: 74 LIPILQEELKE---YNNFTLIHKDALKIDFNGLMENKDSIKLVANLPYYVTTPIISRLLK 130
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
F+S T+++QKE A R+ A P E+ L V V+ + E + VS F+P PKVD
Sbjct: 131 EKCDFKSLTIMIQKEVAERIDAEPNCKEYGSLTVLVQYYCNTEIIRKVSPNCFIPRPKVD 190
Query: 178 SSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTLGATFK 217
S V+ + +E P V + + F R+ F+ + KTL + K
Sbjct: 191 SIVIKLDRLSE-PRVRVKSEKLFFNVVRSSFNMRRKTLWNSLK 232
>gi|227528872|ref|ZP_03958921.1| dimethyladenosine transferase [Lactobacillus vaginalis ATCC 49540]
gi|227351195|gb|EEJ41486.1| dimethyladenosine transferase [Lactobacillus vaginalis ATCC 49540]
Length = 297
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 124/221 (56%), Gaps = 17/221 (7%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQ+ LT+ +L IV + + D V+EIGPG G LT KL + + +V A+EID+ ++
Sbjct: 26 KGFGQNFLTDPAILQRIVEAAEVTDADNVIEIGPGIGALTEKLAQAAGQVVAVEIDQDLI 85
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFP-----QFD------LVVANIPYGISSPLVAK 114
+L + A +D + VI++D L+ P QF VVAN+PY I+SP++
Sbjct: 86 PVLEKTLAA---YDNVTVINQDILRANLPELIQQQFTDPTKPIKVVANLPYYITSPILMN 142
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
L+ + S T+++QKE A+RL A PG ++ L + ++ D E +VS+ F+P P
Sbjct: 143 LLASPVEWSSITVMMQKEVAQRLTAKPGTKQYGALTLAIEYQMDAEVAFNVSRHSFIPAP 202
Query: 175 KVDSSVVIIRPKAE---IPDVNLDEWRAFTRTCFSKKNKTL 212
VDS++V+++ + + + + F R CF+ + K+L
Sbjct: 203 NVDSAIVVLKQRQQPLTTKPFDKQKLMGFIRGCFAHRRKSL 243
>gi|426411834|ref|YP_007031933.1| dimethyladenosine transferase [Pseudomonas sp. UW4]
gi|426270051|gb|AFY22128.1| dimethyladenosine transferase [Pseudomonas sp. UW4]
Length = 272
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/226 (35%), Positives = 122/226 (53%), Gaps = 14/226 (6%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ HK++ GQ+ L + V+D I+R +D +LEIGPG G LT LL ++ +E
Sbjct: 5 YQHKARKRFGQNFLHDAGVIDRILRSIHAKAEDRLLEIGPGQGALTQGLLSSGAQLDVVE 64
Query: 60 IDERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL------VVANIPYGISSPLVA 113
+D+ ++ ILN++ AD N+ DALK +F + VV N+PY IS+PL+
Sbjct: 65 LDKDLIPILNQQFADK---SNFNLHQGDALKFDFNSLNAAPGSLRVVGNLPYNISTPLIF 121
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L++ + R +LQKE RL A PG ++ RL++ V+ VE + +V F P
Sbjct: 122 HLLHNSHLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPP 181
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P AE+P D R F+++ KTL T K
Sbjct: 182 PKVDSAIVRLVPHAELPHPAKDHRLLERVVREAFNQRRKTLRNTLK 227
>gi|336394517|ref|ZP_08575916.1| dimethyladenosine transferase [Lactobacillus farciminis KCTC 3681]
Length = 293
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 126/219 (57%), Gaps = 17/219 (7%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS GQ+ LTN++VLD IV S + D+ +EIGPG G LT KL +V++KV A EID+ ++
Sbjct: 27 KSLGQNFLTNEKVLDDIVDASGLKSDEIAIEIGPGIGALTEKLAQVAEKVFAFEIDDNLI 86
Query: 66 EILNRRAADS-GFHDRLNVISKDALKTEFPQF----------DLVVANIPYGISSPLVAK 114
+L AD+ ++D + VI++D LK + +F VVAN+PY I++P++
Sbjct: 87 PVL----ADTLQYYDNIEVINQDILKVDLDEFVKEHGLEGKTIKVVANLPYYITTPIMLN 142
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
L+ F+S L++QKE A+R+ A PG E+ L + V+ + V F+P P
Sbjct: 143 LINSDYPFQSLVLMMQKEVAQRITAKPGHREYGSLTIAVQTQMNARIDRIVGSSSFIPRP 202
Query: 175 KVDSSVVIIR--PKAEIPDVNLDEWRAFTRTCFSKKNKT 211
KVDS+V ++ PK ++ + + R+ F +K K+
Sbjct: 203 KVDSAVAVLDRLPKEQVDIEDPKFFNQVVRSAFMQKRKS 241
>gi|429247034|ref|ZP_19210310.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Clostridium botulinum CFSAN001628]
gi|428755887|gb|EKX78482.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Clostridium botulinum CFSAN001628]
Length = 278
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 133/223 (59%), Gaps = 13/223 (5%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+K+ GQ+ L ++ VL+ I+ + I+ +DTV+EIGPG G LT +LLE +K+V++IE+D
Sbjct: 17 FNKNLGQNFLIDESVLEDIIEGAEISKEDTVIEIGPGVGTLTKELLERAKEVYSIELDGD 76
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQF----DLV--VANIPYGISSPLVAKLVY 117
++ IL + ++ +I KDALK F + D + VAN+PY +++P++++L+
Sbjct: 77 LIPILQEELKE---YNNFTLIHKDALKINFNELMENKDSIKLVANLPYYVTTPIISRLLT 133
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
F+S T+++QKE A R+ A P E+ L V V+ + + + VS F+P PKVD
Sbjct: 134 EKCDFKSLTIMIQKEVAERINAEPNCKEYGSLTVLVQYYCNTKIIRKVSPNSFIPKPKVD 193
Query: 178 SSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTLGATFK 217
S V+ + +E P V + + F R+ F+ + KTL + K
Sbjct: 194 SIVIKLDRLSE-PRVRVKSQKLFFNVVRSSFNMRRKTLWNSLK 235
>gi|352090529|ref|ZP_08954578.1| dimethyladenosine transferase [Rhodanobacter sp. 2APBS1]
gi|389797149|ref|ZP_10200192.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Rhodanobacter sp. 116-2]
gi|351676902|gb|EHA60054.1| dimethyladenosine transferase [Rhodanobacter sp. 2APBS1]
gi|388447523|gb|EIM03523.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Rhodanobacter sp. 116-2]
Length = 262
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 119/224 (53%), Gaps = 15/224 (6%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS GQH L ++R +D IV + +D V+EIGPG G LTL LL V+ ++ AIE+D ++
Sbjct: 7 KSFGQHFLHDRRYIDRIVSAIAPRAEDFVVEIGPGEGALTLPLLAVAGRLTAIELDTDLI 66
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEF---------PQFDLVVANIPYGISSPLVAKLV 116
L RAA +G L++I D LK +F P+ + N+PY ISSP++ V
Sbjct: 67 PGLQARAATTG---ELHIIHADVLKVDFSALAHSHGVPRLR-IAGNLPYYISSPILFHCV 122
Query: 117 YGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKV 176
+ +LQKE R+ A PG + RL+V ++L VE + DV F P PKV
Sbjct: 123 EHAAAIADMHFMLQKEVVERMAAEPGSKVYGRLSVMLQLACRVEPLFDVPPEAFRPPPKV 182
Query: 177 DSSVV--IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
+S+VV + P E+ D + A + F ++ KTL +Q
Sbjct: 183 ESAVVRLLPLPAHELHDAPPEHLHAVVKAAFGQRRKTLANALRQ 226
>gi|377556435|ref|ZP_09786142.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
gastricus PS3]
gi|376168485|gb|EHS87254.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
gastricus PS3]
Length = 297
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 132/230 (57%), Gaps = 17/230 (7%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I K GQ+ LT+ VL+ IV+ + I D V+EIGPG G LT L++ + +V A+EID
Sbjct: 22 IHAKKGFGQNFLTDLNVLNGIVQSAHITQGDNVIEIGPGIGALTEVLVKAAHQVVALEID 81
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALK--------TEF--PQFDL-VVANIPYGISSP 110
++ +L+ A ++ + VI +D LK TEF PQ + VVAN+PY I+SP
Sbjct: 82 GDLLPVLDDVLAP---YNNVKVIHQDILKANLPELIQTEFTNPQQPIKVVANLPYYITSP 138
Query: 111 LVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDF 170
++ L+ ++ + +++QKE A RL A PG + L + ++ + +VS+R F
Sbjct: 139 ILMNLLASEVNWDTICVMMQKEVAERLTAKPGTKAYGSLTLAIEYQMQAKVAFNVSRRSF 198
Query: 171 LPCPKVDSSVVIIRPKA-EIPDVNLDEWRAF--TRTCFSKKNKTLGATFK 217
+P P VDS++V++ P+ EIP++ D+ R F R CF+ + K+L K
Sbjct: 199 VPAPNVDSAIVVLTPRQNEIPELPFDDKRLFGLIRGCFAHRRKSLWNNLK 248
>gi|389844073|ref|YP_006346153.1| dimethyladenosine transferase [Mesotoga prima MesG1.Ag.4.2]
gi|387858819|gb|AFK06910.1| dimethyladenosine transferase [Mesotoga prima MesG1.Ag.4.2]
Length = 265
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/221 (37%), Positives = 124/221 (56%), Gaps = 10/221 (4%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I +K+ GQ+ L + RV IV +NP T++EIG G+G+LT LLE +V EID
Sbjct: 8 IRLNKALGQNFLKSDRVSRRIVESVELNPSTTIVEIGVGSGSLTSILLEKGYRVIGFEID 67
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEF---PQFDLVVANIPYGISSPLVAKLVYG 118
R E NRR +R + +D LK + P VANIPY I+SP++ ++++
Sbjct: 68 TRFSE-GNRRLE----GERCELRYEDFLKADLSTLPDSVTYVANIPYYITSPIIERIMFD 122
Query: 119 TKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDS 178
SF A L++QKE+A RL A+P E+ L VNV ++V + VS+++F+P P+VDS
Sbjct: 123 GPSFDRAVLMVQKEYADRLTATPRTKEYGILTVNVNTFSEVRELFQVSRKEFIPQPEVDS 182
Query: 179 SVVIIR--PKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
V+ + I + D++R F R CFS++ K L K
Sbjct: 183 MVIELSLLENPPIGEARRDQYRKFVRHCFSQRRKKLKNNLK 223
>gi|331701953|ref|YP_004398912.1| ribosomal RNA small subunit methyltransferase A [Lactobacillus
buchneri NRRL B-30929]
gi|329129296|gb|AEB73849.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
buchneri NRRL B-30929]
Length = 296
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/219 (36%), Positives = 123/219 (56%), Gaps = 15/219 (6%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS GQ+ L + VLD+IV + I D V+EIGPG G LT +L + + KV A EID ++
Sbjct: 26 KSLGQNFLVDLGVLDNIVAAAKITKADNVIEIGPGIGGLTEQLAKAANKVVAFEIDANLL 85
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPYGISSPLVAKL 115
+L+ A +D + +I++D LK P+ FD VVAN+PY I++P+V L
Sbjct: 86 PVLDETLAP---YDNIEIINQDILKANLPKIIDDVFDTEKPLKVVANLPYYITTPIVMDL 142
Query: 116 VYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPK 175
+ G F + +++QKE A RL A P + L+V V+ + VE V K F+P PK
Sbjct: 143 ITGETQFDAIVVMMQKEVAERLNAEPSTKPYGSLSVIVQELNQVEISFVVPKTAFIPQPK 202
Query: 176 VDSSVVIIRPKAE--IPDVNLDEWRAFTRTCFSKKNKTL 212
VDS++V + P+ + + + + +F R CF + KTL
Sbjct: 203 VDSAIVKLTPRVKRAVEPFDQKAFISFVRGCFMHQRKTL 241
>gi|170755195|ref|YP_001779707.1| dimethyladenosine transferase [Clostridium botulinum B1 str. Okra]
gi|259494244|sp|B1ID54.1|RSMA_CLOBK RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|169120407|gb|ACA44243.1| dimethyladenosine transferase [Clostridium botulinum B1 str. Okra]
Length = 275
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 133/223 (59%), Gaps = 13/223 (5%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+K+ GQ+ L ++ VL+ I+ + I+ +DTV+EIGPG G LT +LLE +K+V++IE+D
Sbjct: 14 FNKNLGQNFLIDESVLEDIIEGAEISKEDTVIEIGPGVGTLTKELLERAKEVYSIELDGD 73
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQF----DLV--VANIPYGISSPLVAKLVY 117
++ IL + ++ +I KDALK F + D + VAN+PY +++P++++L+
Sbjct: 74 LIPILQEELKE---YNNFTLIHKDALKINFNELMENKDSIKLVANLPYYVTTPIISRLLT 130
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
F+S T+++QKE A R+ A P E+ L V V+ + + + VS F+P PKVD
Sbjct: 131 EKCDFKSLTIMIQKEVAERINAEPNCKEYGSLTVLVQYYCNTKIIRKVSPNSFIPKPKVD 190
Query: 178 SSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTLGATFK 217
S V+ + +E P V + + F R+ F+ + KTL + K
Sbjct: 191 SIVIKLDRLSE-PRVRVKSQKLFFNVVRSSFNMRRKTLWNSLK 232
>gi|406027425|ref|YP_006726257.1| dimethyladenosine transferase [Lactobacillus buchneri CD034]
gi|405125914|gb|AFS00675.1| dimethyladenosine transferase [Lactobacillus buchneri CD034]
Length = 296
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 123/219 (56%), Gaps = 15/219 (6%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS GQ+ L + VLD+IV + I D V+EIGPG G LT +L + + KV A EID ++
Sbjct: 26 KSLGQNFLVDLGVLDNIVAAAKITKADNVIEIGPGIGGLTEQLAKAANKVVAFEIDANLL 85
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPYGISSPLVAKL 115
+L+ A +D + +I++D LK P+ FD VVAN+PY I++P+V L
Sbjct: 86 PVLDETLAP---YDNIEIINQDILKANLPKIIDDVFDTEKPLKVVANLPYYITTPIVMDL 142
Query: 116 VYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPK 175
+ G F + +++QKE A RL A P + L+V V+ + VE V K F+P PK
Sbjct: 143 ITGETQFDAIVVMMQKEVAERLNAEPSTKPYGSLSVIVQELNQVEISFVVPKTAFIPQPK 202
Query: 176 VDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTL 212
VDS++V + P+ + D+ + +F R CF + KTL
Sbjct: 203 VDSAIVKLTPRVKRAVEPFDQKAFISFVRGCFMHQRKTL 241
>gi|373494068|ref|ZP_09584674.1| dimethyladenosine transferase [Eubacterium infirmum F0142]
gi|371969202|gb|EHO86653.1| dimethyladenosine transferase [Eubacterium infirmum F0142]
Length = 297
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 137/243 (56%), Gaps = 20/243 (8%)
Query: 4 FH--KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
FH KS GQ+ LT++ V+DSI+ + IN +D V+EIGPG G LT++ + + KV AIEID
Sbjct: 27 FHNAKSLGQNFLTDKGVIDSIIEATDINEEDLVIEIGPGIGVLTVEAAKEAGKVCAIEID 86
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFP--------QFDLVVANIPYGISSPLVA 113
+ ++ +L+ +D + VI++D LKT Q V+ N+PY I++P++
Sbjct: 87 KNLLPVLDFTLKG---YDNIEVINQDVLKTNLNDIIKSSTFQHTKVIGNLPYYITTPIIM 143
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ + S T+++QKE A R++A PG F +++ V+ +V V DV K F P
Sbjct: 144 YLLENEINIESITIMMQKEVADRIIAGPGSKTFGAISLAVQYYCEVSEVADVPKEVFYPV 203
Query: 174 PKVDSSVVIIRPKAEIPDVNLDEWRAFT--RTCFSKKNKTL-----GATFKQKKKVIELL 226
PKVDS+V+ + + E P +E F+ + F ++ KT+ GA F + + L
Sbjct: 204 PKVDSTVLKLSIRTEKPVQPKNEKLMFSCIKAGFGQRRKTILNSLTGAGFSKDEIKQALE 263
Query: 227 RLS 229
RLS
Sbjct: 264 RLS 266
>gi|386817169|ref|ZP_10104387.1| dimethyladenosine transferase [Thiothrix nivea DSM 5205]
gi|386421745|gb|EIJ35580.1| dimethyladenosine transferase [Thiothrix nivea DSM 5205]
Length = 260
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 124/227 (54%), Gaps = 14/227 (6%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ H++K GQH L ++ ++D ++R S+ P D V+EIGPG G LT LLE+ ++ +E
Sbjct: 4 YAHQAKKRFGQHFLHDRNIIDKMLRALSLQPTDRVVEIGPGPGALTFPLLEMLPRLDVVE 63
Query: 60 IDERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFD------LVVANIPYGISSPLVA 113
ID ++ + G +L++ ++DALK + P ++ N+PY IS+PL+
Sbjct: 64 IDRDVIAWWQEQPQAQG---KLHIHAQDALKLDIPGLRGDSEPLRLIGNLPYNISTPLIF 120
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
+ + R +LQKE R+ A P +++RL+V V+ + +++ + F P
Sbjct: 121 HFLQHREHIRDMLFMLQKEVVDRITAEPNSKDYSRLSVMVQYYCETHYLLKIGPGAFSPP 180
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFKQ 218
PKVDS+VV ++P A P V DE + FS++ KTL T K+
Sbjct: 181 PKVDSAVVYLKPWATPPYVAKDEAQFGKLVAQAFSQRRKTLRNTLKE 227
>gi|424828023|ref|ZP_18252764.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Clostridium sporogenes PA 3679]
gi|365979506|gb|EHN15559.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Clostridium sporogenes PA 3679]
Length = 275
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 132/223 (59%), Gaps = 13/223 (5%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F+K+ GQ+ L ++ VL+ IV + I+ +DTV+EIGPG G LT +LLE +K+V++IE+D
Sbjct: 14 FNKNLGQNFLVDESVLEDIVEGAEISKEDTVIEIGPGVGTLTKELLEKAKEVYSIELDGD 73
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQF----DLV--VANIPYGISSPLVAKLVY 117
++ IL + ++ +I KDALK +F D + VAN+PY +++P++++L+
Sbjct: 74 LIPILQEELKE---YNNFTLIHKDALKIDFNGLMENKDSIKLVANLPYYVTTPIISRLLT 130
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
F+S T+++QKE A R+ A P E+ L V V+ + + + VS F+P PKVD
Sbjct: 131 EKCDFKSLTIMIQKEVAERINAEPNCKEYGSLTVLVQYYCNTKIIRKVSPNCFIPRPKVD 190
Query: 178 SSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTLGATFK 217
S+VI K P V + + F R+ F+ + KTL + K
Sbjct: 191 -SIVIKLDKLSQPRVKVKNEKLFFNVVRSSFNMRRKTLWNSLK 232
>gi|251778936|ref|ZP_04821856.1| dimethyladenosine transferase [Clostridium botulinum E1 str. 'BoNT
E Beluga']
gi|243083251|gb|EES49141.1| dimethyladenosine transferase [Clostridium botulinum E1 str. 'BoNT
E Beluga']
Length = 283
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 126/219 (57%), Gaps = 15/219 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L ++ VL+ IV + +N +D ++EIGPG G LT KLL+ +K+V IE+D
Sbjct: 19 FSKSLGQNFLLDESVLNDIVDGAEVNENDFIIEIGPGVGTLTAKLLQKAKRVTCIELDND 78
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL------VVANIPYGISSPLVAKLVY 117
++ IL + + G +D+ +I DALK +F + +VAN+PY +++P++ KL+
Sbjct: 79 LIPILQQ---ELGEYDKFELIHNDALKVDFNEIMKNEEHVKLVANLPYYVTTPIIVKLLK 135
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
F S T+++QKE A R+ A P E+ L+V V+ + + V VS F+P PKVD
Sbjct: 136 ENHKFESLTIMIQKEVAERINAEPNCKEYGALSVLVQYYCNTKIVRKVSPESFMPRPKVD 195
Query: 178 SSVV----IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTL 212
S V+ + P+ ++ D L R F+ + KTL
Sbjct: 196 SIVIRLDRLSNPRVKVQDEKL--LFDIVRAGFNMRRKTL 232
>gi|395238697|ref|ZP_10416608.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
gigeriorum CRBIP 24.85]
gi|394477374|emb|CCI86585.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
gigeriorum CRBIP 24.85]
Length = 293
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 134/254 (52%), Gaps = 25/254 (9%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+F K+K GQ+ L + + + I+ + I D V+EIGPG G+LT +LL KV A E
Sbjct: 20 YFVKAKKNLGQNFLVDHQAVMGIIEAAEIEAGDQVIEIGPGIGSLTEQLLLAGAKVFAYE 79
Query: 60 IDERMVEILNR----RAADSGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPY 105
+D+ + EIL+ + A R ++ KD L+ +F FD VVAN+PY
Sbjct: 80 VDDSLPEILDNELPAKIAGEDLASRFKLLLKDILQADFKADIGDFFDFSQPIKVVANLPY 139
Query: 106 GISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDV 165
I++P++ L +F S TL++QKE A RL A P ++ L + V+ V+ + V
Sbjct: 140 YITTPIIFSLANSDLNFVSLTLMMQKEVAERLEAQPNSKDYGPLTIAVQTQMAVKLALTV 199
Query: 166 SKRDFLPCPKVDSSVVIIRPKA-EIPDVNLDEWRAFTRTCFSKKNKTLGATFK------- 217
F+P PKVDSSVV++RP A +I ++ + + CF+++ KTL K
Sbjct: 200 DHSSFMPAPKVDSSVVVLRPLAKKIAVGDVKHFNRVVKMCFAQRRKTLNNNLKNLISDSD 259
Query: 218 QKKKVIELLRLSKQ 231
++ K+I L L Q
Sbjct: 260 RRAKIIAELGLKPQ 273
>gi|416355243|ref|ZP_11681793.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Clostridium botulinum C str. Stockholm]
gi|338195249|gb|EGO87555.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Clostridium botulinum C str. Stockholm]
Length = 281
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 127/226 (56%), Gaps = 19/226 (8%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ LT+Q VLD IV S + +D V+EIGPG G LT +LL+ +KKV A+E+D
Sbjct: 17 FTKSLGQNFLTDQTVLDDIVIGSEVCEEDFVIEIGPGVGTLTKELLKKAKKVCAVELDSN 76
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFD------LVVANIPYGISSPLVAKLVY 117
++ IL + + +I KDALK F + VVAN+PY +++P++A+L+
Sbjct: 77 LIPILQEELKE---FNNFQLIHKDALKINFKELIGDEKSVKVVANLPYYVTTPIIARLLK 133
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
+F+S T+++QKE A R+ + P E+ L++ V+ D + V F+P PKVD
Sbjct: 134 EGYNFKSLTIMIQKEVAERIASEPNCKEYGALSILVQYYCDTRIIRKVPPTCFIPQPKVD 193
Query: 178 SSVVIIR------PKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
S +IIR P+ ++ D L + R F+ + KTL K
Sbjct: 194 S--IIIRLDRLNEPRVKVQDKEL--FFKIVRQSFNMRRKTLRNAIK 235
>gi|330508534|ref|YP_004384962.1| dimethyladenosine transferase [Methanosaeta concilii GP6]
gi|328929342|gb|AEB69144.1| dimethyladenosine transferase [Methanosaeta concilii GP6]
Length = 247
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 115/194 (59%), Gaps = 11/194 (5%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQH L ++ ++DSIV + + +D VLEIGPG G LT +L + +V+A+EID + L
Sbjct: 4 GQHFLIDRSIVDSIVSHADLGLEDWVLEIGPGEGILTRELAARAGRVYAVEIDPDLAASL 63
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
A + + VI DAL PQ++ +V+N+PY ISS + +L+ ++ F A L+
Sbjct: 64 CNTAPN------VMVIHADALTVRLPQYNKIVSNLPYNISSKITYRLL--SRPFDLAVLM 115
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
QKEFA+RL A P + RL + + +E + +VS++ F P P VDS++V +RP+ E
Sbjct: 116 FQKEFAQRLKAEPASKIYGRLGMVAGFFSHIEILQNVSRKAFRPVPDVDSAIVRLRPRTE 175
Query: 189 IPDVNLDEWRAFTR 202
P V+ RAF R
Sbjct: 176 RPQVDP---RAFMR 186
>gi|172056080|ref|YP_001812540.1| dimethyladenosine transferase [Exiguobacterium sibiricum 255-15]
gi|171988601|gb|ACB59523.1| dimethyladenosine transferase [Exiguobacterium sibiricum 255-15]
Length = 292
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 128/223 (57%), Gaps = 17/223 (7%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + VL +IV +++ PD VLEIGPG G+LT + + +KKV A+EID+R
Sbjct: 21 FKKSLGQNFLIDLNVLGNIVGAANLTPDSGVLEIGPGIGSLTEQSAKQAKKVVALEIDQR 80
Query: 64 MVEILNRRAADSGFHDRLNVISKDALK--------TEFPQFDL----VVANIPYGISSPL 111
++ IL A + + VI DAL+ EF Q + VVAN+PY +++P+
Sbjct: 81 LLPILEDSLAP---YPHVKVIHGDALELDLETIVDEEFTQQGITDLAVVANLPYYVTTPI 137
Query: 112 VAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFL 171
+ +++ FR+ +++QKE A R+ A PG + L++ ++ A+ E V K+ F+
Sbjct: 138 IMRILEARTPFRTLIMMIQKEVAERIGAQPGTKAYGSLSIAIQYYAEAEVCFTVPKQVFI 197
Query: 172 PCPKVDSSVVIIRPKAEIPDVNLDEWRAF--TRTCFSKKNKTL 212
P P VDS+V+ + + E LDE F TR F+++ KT+
Sbjct: 198 PAPNVDSAVIRLNIRKEPAVKTLDEKLFFEVTRASFAQRRKTI 240
>gi|408410474|ref|ZP_11181687.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus sp.
66c]
gi|408410695|ref|ZP_11181899.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus sp.
66c]
gi|407875161|emb|CCK83705.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus sp.
66c]
gi|407875382|emb|CCK83493.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus sp.
66c]
Length = 293
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 124/232 (53%), Gaps = 15/232 (6%)
Query: 1 YIFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEI 60
++ K+ GQ+ L + + I + I D V+EIGPG G+LT +LL KV A E+
Sbjct: 21 FVRAKKNLGQNFLVDLNAVQGIAEAAGIQEGDQVIEIGPGIGSLTEQLLLYGGKVFAYEV 80
Query: 61 DERMVEILN----RRAADSGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPYG 106
D+ + EIL +R R ++ KD LK F + FDL VVAN+PY
Sbjct: 81 DDSLPEILETELPQRIDGEPLSSRFKLVLKDVLKANFAEDLAGFFDLTKPVKVVANLPYY 140
Query: 107 ISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVS 166
I++P++ L+ +F S TL++QKE A RL A PG ++ L + V+ V ++V
Sbjct: 141 ITTPIIFSLLESGLNFTSLTLMMQKEVADRLAAGPGSKDYGPLTIAVQTRMAVNLALNVG 200
Query: 167 KRDFLPCPKVDSSVVIIRPKAEIPDV-NLDEWRAFTRTCFSKKNKTLGATFK 217
F+P PKVDS+VV++ P DV + +++ + CF+++ KTL K
Sbjct: 201 HASFMPQPKVDSAVVVLTPLKTPVDVGDPEKFNRLVKLCFAQRRKTLSNNLK 252
>gi|303234855|ref|ZP_07321480.1| dimethyladenosine transferase [Finegoldia magna BVS033A4]
gi|302493973|gb|EFL53754.1| dimethyladenosine transferase [Finegoldia magna BVS033A4]
Length = 283
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 130/219 (59%), Gaps = 9/219 (4%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K+ GQ+ L + ++++I+ S I DD V+EIGPG G LT +L++ K +++IEID R
Sbjct: 22 FSKALGQNFLIDGNLIENIIDYSDITEDDYVIEIGPGFGTLTERLVDKCKFLYSIEIDSR 81
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL------VVANIPYGISSPLVAKLVY 117
++++L D + +I++D LK + + + VVAN+PY I++P++ L
Sbjct: 82 LMDVLKYTVGD---RENFKIINEDVLKVDLNELNHEDKKFKVVANLPYYITTPIIEHLFN 138
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
S T+++QKE A R++A G ++ L++ VK +D + +++ K F+P PKVD
Sbjct: 139 YRDIIESITVMVQKEVANRMVADVGSKDYASLSLFVKQNSDAKIILNAPKTVFMPQPKVD 198
Query: 178 SSVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATF 216
S+VV ++ K D++ + R R+ FSK+ KT+ +F
Sbjct: 199 SAVVNMKLKKLDEDIDQELLRQLIRSGFSKRRKTILNSF 237
>gi|253681083|ref|ZP_04861886.1| dimethyladenosine transferase [Clostridium botulinum D str. 1873]
gi|253562932|gb|EES92378.1| dimethyladenosine transferase [Clostridium botulinum D str. 1873]
Length = 281
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 127/226 (56%), Gaps = 19/226 (8%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ LT+Q VLD IV S + +D V+EIGPG G LT +LL+ +KKV A+E+D
Sbjct: 17 FTKSLGQNFLTDQTVLDDIVIGSEVCEEDFVIEIGPGVGTLTKELLKKAKKVCAVELDSN 76
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFD------LVVANIPYGISSPLVAKLVY 117
++ IL + + +I KDALK F + VVAN+PY +++P++A+L+
Sbjct: 77 LIPILQEELKE---FNNFQLIHKDALKINFKELIGDEKSVKVVANLPYYVTTPIIARLLK 133
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
+F+S T+++QKE A R+ + P E+ L++ V+ D + V F+P PKVD
Sbjct: 134 EGYNFKSLTIMIQKEVAERIASEPNCKEYGALSILVQYYCDTTIIRKVPPTCFIPQPKVD 193
Query: 178 SSVVIIR------PKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
S +IIR P+ ++ D L + R F+ + KTL K
Sbjct: 194 S--IIIRLDRLNEPRVKVQDKEL--FFKIVRQSFNMRRKTLRNAIK 235
>gi|428315438|ref|YP_007113320.1| dimethyladenosine transferase [Oscillatoria nigro-viridis PCC 7112]
gi|428239118|gb|AFZ04904.1| dimethyladenosine transferase [Oscillatoria nigro-viridis PCC 7112]
Length = 270
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/240 (37%), Positives = 131/240 (54%), Gaps = 20/240 (8%)
Query: 5 HKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERM 64
K QH L +++ LD IV+ +S++ D VLEIGPGTG LT +LL ++ V A+EID
Sbjct: 7 RKQFAQHWLKSEKALDKIVKAASLD-GDRVLEIGPGTGILTRRLLPAAESVVAVEIDR-- 63
Query: 65 VEILNRRAADSGFHDRLNVISKDALK-------TEFPQF---DLVVANIPYGISSPLVAK 114
++ + A G D ++ D L+ T FP+F + VVANIPY I+ P++ K
Sbjct: 64 -DLCLKLAKQLGKTDNFLLLQGDFLEMDLDAELTAFPKFQNPNKVVANIPYNITGPILQK 122
Query: 115 L-----VYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRD 169
L V K F + LL+QKE A+RL A PG + F L+V V+ +A+ E + DV +D
Sbjct: 123 LLGTISVPAAKPFDAIVLLVQKEVAQRLYAKPGSTAFGALSVRVQYLAECELICDVPSKD 182
Query: 170 FLPCPKVDSSVVIIRPKA-EIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRL 228
F P PKVDS+VV + P+ E VN + F K K L K + +L++L
Sbjct: 183 FFPPPKVDSAVVRLLPRQIETAAVNPRYLENLVKLGFGSKRKMLRNNLKGAVDLDKLVQL 242
>gi|188588306|ref|YP_001919554.1| dimethyladenosine transferase [Clostridium botulinum E3 str. Alaska
E43]
gi|188498587|gb|ACD51723.1| dimethyladenosine transferase [Clostridium botulinum E3 str. Alaska
E43]
Length = 283
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 126/219 (57%), Gaps = 15/219 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L ++ VL+ IV + +N +D ++EIGPG G LT KLL+ +K+V IE+D
Sbjct: 19 FSKSLGQNFLLDESVLNDIVCGAEVNENDFIIEIGPGVGTLTAKLLQKAKRVTCIELDND 78
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL------VVANIPYGISSPLVAKLVY 117
++ IL + + G +D+ +I DALK +F + +VAN+PY +++P++ KL+
Sbjct: 79 LIPILQQ---ELGEYDKFELIHNDALKVDFNEIMKNEEHVKLVANLPYYVTTPIIVKLLK 135
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
F S T+++QKE A R+ A P E+ L+V V+ + + V VS F+P PKVD
Sbjct: 136 ENHKFESLTIMIQKEVAERINAEPNCKEYGALSVLVQYYCNTKIVRKVSPESFMPRPKVD 195
Query: 178 SSVV----IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTL 212
S V+ + P+ ++ D L R F+ + KTL
Sbjct: 196 SIVIRLDRLSNPRVKVQDEKL--LFDIVRAGFNMRRKTL 232
>gi|428220891|ref|YP_007105061.1| dimethyladenosine transferase [Synechococcus sp. PCC 7502]
gi|427994231|gb|AFY72926.1| dimethyladenosine transferase [Synechococcus sp. PCC 7502]
Length = 261
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 118/216 (54%), Gaps = 5/216 (2%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I K GQH L + + L I++ +++ D +LEIGPGTG LT+KLL + + + A+EID
Sbjct: 2 IHPRKQFGQHWLKSDKALAKILQAANLQLTDRILEIGPGTGILTVKLLPLVRSLVAVEID 61
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYG--- 118
+ + L R A+ +L +I D L P + VVANIPY I+SP++ KL+
Sbjct: 62 RDLCQNLRHRFAEPILEQKLELIEGDILSLPLPDCNKVVANIPYNITSPILEKLLGSISQ 121
Query: 119 -TKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
F LL+QKE RL+A G + ++V V+ +A+ F+ DV + F P PKVD
Sbjct: 122 PVAQFEQIVLLVQKEIGDRLVAKAGHKAYGAMSVRVQYLAECHFICDVPAKAFTPPPKVD 181
Query: 178 SSVVIIRPKAEI-PDVNLDEWRAFTRTCFSKKNKTL 212
S+VV + P++ + P + + F+ K K L
Sbjct: 182 SAVVCLLPRSPVKPASDPKFLETIIKLGFATKRKML 217
>gi|427720873|ref|YP_007068867.1| dimethyladenosine transferase [Calothrix sp. PCC 7507]
gi|427353309|gb|AFY36033.1| dimethyladenosine transferase [Calothrix sp. PCC 7507]
Length = 272
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/221 (38%), Positives = 124/221 (56%), Gaps = 21/221 (9%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
QH L +++VLD+IV+ + DD +LEIGPGTG LT +LL + + + A+EID + ++L
Sbjct: 9 AQHWLKSEKVLDAIVKAAGCTSDDRILEIGPGTGILTRRLLPLVQSLVAVEIDRDLCQLL 68
Query: 69 NRRAADSGFHDRLNVISKDALK-------TEFPQF---DLVVANIPYGISSPLVAKLVYG 118
A G + ++ D L T FP+F + VVANIPY I+ P++ KL+ G
Sbjct: 69 ---AKQLGKKENFLLLQGDFLTLDSPSQLTAFPKFQKQNKVVANIPYNITGPIIEKLL-G 124
Query: 119 TKS------FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
T S F S LL+QKE A RL A P F L+V V+ +AD E + V F P
Sbjct: 125 TISNPNLEPFDSIVLLVQKEVAERLYAKPESRAFGALSVRVQYLADCELICPVPAAAFYP 184
Query: 173 CPKVDSSVVIIRPKA-EIPDVNLDEWRAFTRTCFSKKNKTL 212
PKVDS+VV +RP+ E P ++ + + + F+ K K L
Sbjct: 185 APKVDSAVVRLRPRQIETPALDPRKLESLIKLGFAAKRKML 225
>gi|372324025|ref|ZP_09518614.1| Dimethyladenosine transferase [Oenococcus kitaharae DSM 17330]
gi|366982833|gb|EHN58232.1| Dimethyladenosine transferase [Oenococcus kitaharae DSM 17330]
Length = 292
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 124/210 (59%), Gaps = 9/210 (4%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQ+ L + VL I ++IN DDTVLEIGPG G+LT +L + + +V A EID++++ +L
Sbjct: 29 GQNFLIDLNVLRQIAELAAINQDDTVLEIGPGIGSLTEQLAKAAGQVVAYEIDKKLIPVL 88
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFD-----LVVANIPYGISSPLVAKLVYGTKSFR 123
A +D + VI++D LK +F F +VAN+PY I++P++ L+ +F+
Sbjct: 89 AETLAP---YDNVKVINQDILKADFSVFHDAKSLKIVANLPYYITTPILFYLLGEKLAFK 145
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
S T+++QKE A RL A G E+ L++ ++ DV + V + F+P P VDS+VV++
Sbjct: 146 SITVMMQKEVAARLQAQVGSKEYGELSLAIQYRTDVTIRLQVPRSAFMPSPNVDSAVVML 205
Query: 184 RPKAEIPDVNLD-EWRAFTRTCFSKKNKTL 212
PKA + E + + F+ + K+L
Sbjct: 206 TPKAGFKAFPYEKELFSLIKAAFAHRRKSL 235
>gi|227522373|ref|ZP_03952422.1| dimethyladenosine transferase [Lactobacillus hilgardii ATCC 8290]
gi|227090431|gb|EEI25743.1| dimethyladenosine transferase [Lactobacillus hilgardii ATCC 8290]
Length = 301
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 124/219 (56%), Gaps = 15/219 (6%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS GQ+ L + +L++IV + + +D V+EIGPG G LT +L + + +V A EIDE+++
Sbjct: 31 KSLGQNFLIDLNILNNIVEAAELTKNDNVIEIGPGIGGLTEQLAKAANQVLAFEIDEKLL 90
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDL----------VVANIPYGISSPLVAKL 115
+L+ + ++ + +I++D LK P+ VVAN+PY I++P+V L
Sbjct: 91 PVLDETLSP---YNNIEIINQDILKANLPEVVAKRFRTDKPLKVVANLPYYITTPIVMDL 147
Query: 116 VYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPK 175
+ F S +++QKE A RL A PG + L+V V+ DV+ V K F+P PK
Sbjct: 148 LANPVKFESIVVMMQKEVAERLDAKPGTKPYGSLSVIVQQQNDVDISFVVPKTAFIPQPK 207
Query: 176 VDSSVVIIRPKAEIPDVNLD--EWRAFTRTCFSKKNKTL 212
VDS++V + PK ++ D ++ F R CF + KTL
Sbjct: 208 VDSAIVKLSPKMQVDKRPFDHKKFVGFVRGCFMHQRKTL 246
>gi|227509274|ref|ZP_03939323.1| dimethyladenosine transferase [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227512287|ref|ZP_03942336.1| dimethyladenosine transferase [Lactobacillus buchneri ATCC 11577]
gi|227084462|gb|EEI19774.1| dimethyladenosine transferase [Lactobacillus buchneri ATCC 11577]
gi|227191272|gb|EEI71339.1| dimethyladenosine transferase [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 301
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 124/219 (56%), Gaps = 15/219 (6%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS GQ+ L + +L++IV + + +D V+EIGPG G LT +L + + +V A EIDE+++
Sbjct: 31 KSLGQNFLIDLNILNNIVEAAELTKNDNVIEIGPGIGGLTEQLAKAANQVLAFEIDEKLL 90
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDL----------VVANIPYGISSPLVAKL 115
+L+ + ++ + +I++D LK P+ VVAN+PY I++P+V L
Sbjct: 91 PVLDETLSP---YNNIEIINQDILKANLPEVVAKRFRTDKPLKVVANLPYYITTPIVMDL 147
Query: 116 VYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPK 175
+ F S +++QKE A RL A PG + L+V V+ DV+ V K F+P PK
Sbjct: 148 LANPVKFESIVVMMQKEVAERLDAKPGTKPYGSLSVIVQQQNDVDISFVVPKTAFIPQPK 207
Query: 176 VDSSVVIIRPKAEIPDVNLD--EWRAFTRTCFSKKNKTL 212
VDS++V + PK ++ D ++ F R CF + KTL
Sbjct: 208 VDSAIVKLSPKMQVDKRPFDHKKFVGFVRGCFMHQRKTL 246
>gi|407475932|ref|YP_006789809.1| ribosomal RNA small subunit methyltransferase A [Exiguobacterium
antarcticum B7]
gi|407060011|gb|AFS69201.1| Ribosomal RNA small subunit methyltransferase A [Exiguobacterium
antarcticum B7]
Length = 292
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 127/223 (56%), Gaps = 17/223 (7%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + VL +IV +++ PD VLEIGPG G+LT + + +KKV A+EID+R
Sbjct: 21 FKKSLGQNFLIDLNVLGNIVGAANLTPDSGVLEIGPGIGSLTEQSAKQAKKVVALEIDQR 80
Query: 64 MVEILNRRAADSGFHDRLNVISKDALK--------TEFPQFDL----VVANIPYGISSPL 111
++ IL A + + VI DAL+ EF Q + VVAN+PY +++P+
Sbjct: 81 LLPILEDSLAP---YPHVKVIHGDALELDLETIVDQEFTQQGITDLAVVANLPYYVTTPI 137
Query: 112 VAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFL 171
+ +++ FR+ +++QKE A R+ A PG + L++ ++ A+ E V K F+
Sbjct: 138 IMRILEARTPFRTLIMMIQKEVAERIGAKPGTKAYGSLSIAIQYYAEAEVCFTVPKHVFI 197
Query: 172 PCPKVDSSVVIIRPKAEIPDVNLDEWRAF--TRTCFSKKNKTL 212
P P VDS+V+ + + E LDE F TR F+++ KT+
Sbjct: 198 PAPNVDSAVIRLNIRKEPAVKTLDEKLFFEVTRASFAQRRKTI 240
>gi|377555957|ref|ZP_09785681.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[endosymbiont of Bathymodiolus sp.]
Length = 255
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 128/236 (54%), Gaps = 25/236 (10%)
Query: 5 HKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
HK++ GQ+ LT+ RV++ I+ + +D +LEIGPG G +TL LLE K+++ IEID
Sbjct: 4 HKARKRFGQNFLTDNRVIERIIATIAPKFNDNLLEIGPGQGAMTLPLLECVKQLNVIEID 63
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL--------VVANIPYGISSPLVA 113
+ ++ +LN D+ L + DALK FDL VV N+PY ISSPL+
Sbjct: 64 KDLITMLNNLNKDN-----LIIHQGDALK-----FDLSTLTTPLRVVGNLPYNISSPLLF 113
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ T +LQKE R++A G + RL+V ++ +VE + V F P
Sbjct: 114 HLLENRDKVMDMTFMLQKEVVERMVAENGSKTYGRLSVMMQAFFEVELIFTVPPESFEPA 173
Query: 174 PKVDSSVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK----QKKKVIEL 225
PKVDS++V ++P A N + + + FS++ KTLG K Q++ I+L
Sbjct: 174 PKVDSAIVYLKPLAPSKVSNTELFEKIVKAAFSQRRKTLGNCLKSLLLQQQTTIDL 229
>gi|379003793|ref|YP_005259465.1| dimethyladenosine transferase [Pyrobaculum oguniense TE7]
gi|375159246|gb|AFA38858.1| dimethyladenosine transferase [Pyrobaculum oguniense TE7]
Length = 228
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/203 (40%), Positives = 119/203 (58%), Gaps = 11/203 (5%)
Query: 10 QHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILN 69
QH L ++ V + IV D V+E+GPGTG LT L E SK V+AIE+D+ + E L
Sbjct: 7 QHFLRDRSVAEFIVGLVPGGLD--VVEVGPGTGALTFPLAEKSKTVYAIELDKSLAEQLR 64
Query: 70 RRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLL 129
RA + + VI DAL+ E+P+ D V+N+PY I+SPL+ KL + A + +
Sbjct: 65 ARAPPN-----VVVIWGDALQIEWPKADFFVSNMPYSITSPLLLKL---ARHRLPAVVTV 116
Query: 130 QKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAEI 189
Q+E A R+ A+PG E+ RL V ++ + +VE V + R F P PKV S+VV +RPKA
Sbjct: 117 QREVAERMAAAPGTEEYGRLTVAIQCMYEVEVVRVLPPRVFSPPPKVYSAVVTLRPKAPC 176
Query: 190 PDVNLDEWRAFTRTCFSKKNKTL 212
D + + + FT FS + KTL
Sbjct: 177 VD-DFEAFERFTAKLFSARRKTL 198
>gi|154249153|ref|YP_001409978.1| dimethyladenosine transferase [Fervidobacterium nodosum Rt17-B1]
gi|154153089|gb|ABS60321.1| dimethyladenosine transferase [Fervidobacterium nodosum Rt17-B1]
Length = 261
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/218 (38%), Positives = 123/218 (56%), Gaps = 11/218 (5%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS GQ+ L+++ + IV S++ +DT+LEIG G G LT+ L + V AIEID RM
Sbjct: 5 KSLGQNFLSSEIYAEKIVGLSNVEKNDTILEIGAGAGTLTVALAKTGATVFAIEIDNRME 64
Query: 66 EILNRRAADSGFHDRLNVISKDALKTE---FPQFDLVVANIPYGISSPLVAKLVYGTKSF 122
IL R +D + +I +D L+ + P ++NIPY I++P++ KL++ +F
Sbjct: 65 PILKERLEK---YDNVKIIFEDFLEMDISFLPNGYKCISNIPYYITAPILKKLLF--TNF 119
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
T+++QKE RLL PG S L V ++ VADVE ++ V K F+P P VDS V+
Sbjct: 120 SMLTIMMQKEVGERLLEKPGSSNRGFLTVVLQTVADVEKLLLVPKSAFVPNPDVDSIVLK 179
Query: 183 IRPKAEIPDVNLDEWRA---FTRTCFSKKNKTLGATFK 217
I K E P NL E+ + F FS+K KT+ K
Sbjct: 180 ITKKKEFPFSNLSEFESYWTFVSNSFSQKRKTISNNLK 217
>gi|432328221|ref|YP_007246365.1| dimethyladenosine transferase [Aciduliprofundum sp. MAR08-339]
gi|432134930|gb|AGB04199.1| dimethyladenosine transferase [Aciduliprofundum sp. MAR08-339]
Length = 238
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/175 (43%), Positives = 107/175 (61%), Gaps = 3/175 (1%)
Query: 10 QHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILN 69
Q+ L N R+ D IV +++ P D VLEIGPG G LT +LL+ S+ V A+EID + + LN
Sbjct: 6 QNFLINGRIADFIVEHANLTPQDIVLEIGPGRGILTERLLKKSRVV-AVEIDPELYDALN 64
Query: 70 RRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLL 129
+D +L +I DALK FP F V+ANIPY ISSPL+ K++ F +++
Sbjct: 65 LIFSDEIKSGKLQIILGDALKVNFPAFTKVIANIPYHISSPLIFKIL--EYEFEEGIIMV 122
Query: 130 QKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIR 184
QKEFA RL+A G ++ RL+V + E + V + +F P PKVDS+VV I+
Sbjct: 123 QKEFAERLVARKGSKKYGRLSVMMYYHGSAEILKVVKRGNFRPVPKVDSAVVRIK 177
>gi|302380914|ref|ZP_07269376.1| dimethyladenosine transferase [Finegoldia magna ACS-171-V-Col3]
gi|302311292|gb|EFK93311.1| dimethyladenosine transferase [Finegoldia magna ACS-171-V-Col3]
Length = 283
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 129/219 (58%), Gaps = 9/219 (4%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K+ GQ+ L + ++++I+ S I DD V+EIGPG G LT +L++ K +++IEID R
Sbjct: 22 FSKALGQNFLIDGNLIENIIDYSDITEDDYVIEIGPGFGTLTERLVDKCKFLYSIEIDSR 81
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL------VVANIPYGISSPLVAKLVY 117
++++L D + +I++D LK + + VVAN+PY I++P++ L
Sbjct: 82 LMDVLKYTVGD---RENFKIINEDVLKVNLNELNHEDKKFKVVANLPYYITTPIIEHLFN 138
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
S T+++QKE A R++A G ++ L++ VK +D + +++ K F+P PKVD
Sbjct: 139 YRDIIESITVMVQKEVANRMVADVGSKDYASLSLFVKQNSDAKIILNAPKTVFMPQPKVD 198
Query: 178 SSVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATF 216
S+VV ++ K D++ + R R+ FSK+ KT+ +F
Sbjct: 199 SAVVNMKLKKLDEDIDQELLRQLIRSGFSKRRKTILNSF 237
>gi|395243320|ref|ZP_10420307.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
hominis CRBIP 24.179]
gi|394484550|emb|CCI81315.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
hominis CRBIP 24.179]
Length = 294
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 127/234 (54%), Gaps = 21/234 (8%)
Query: 3 FFHKSK--GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEI 60
F H K GQ+ L + + +IV+ + I DD V+EIGPG G+LT +LL KV A E+
Sbjct: 21 FMHAKKNLGQNFLVDLNTIKAIVQAADIQKDDQVIEIGPGIGSLTEQLLLAGAKVLAYEV 80
Query: 61 DERMVEILN----RRAADSGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPYG 106
D+ + EIL+ + R ++ KD LK F + DL +VAN+PY
Sbjct: 81 DQDLPEILHNELPQTIGGQALDQRFKLVMKDVLKANFQEDAGNFLDLNNPVKIVANLPYY 140
Query: 107 ISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVS 166
I++P++ L+ +F S TL++QKE A+RL A P + L + V+ V F ++V
Sbjct: 141 ITTPIIFDLIKSDLNFVSLTLMMQKEVAQRLSAKPKTKAYGPLTLAVQSRMHVNFDLEVM 200
Query: 167 KRDFLPCPKVDSSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTLGATFK 217
F+P PKVDS+VV + P + PD+ D+++ F + F+++ KTL K
Sbjct: 201 HTSFMPQPKVDSAVVTLTPLTQKPDI--DDYQFFDHVVKIAFAQRRKTLSNNLK 252
>gi|318041295|ref|ZP_07973251.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Synechococcus sp. CB0101]
Length = 270
Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 122/226 (53%), Gaps = 19/226 (8%)
Query: 5 HKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLL-EVSKKVHAIEI 60
H+++ GQH L ++RVLD I+ + ++ DTVLE+GPG G LT +LL + V A+E+
Sbjct: 6 HRTRKRFGQHWLKDERVLDQILAAAELSAADTVLEVGPGRGALTERLLASPAAAVRAVEL 65
Query: 61 DERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYG-- 118
D +VE L R + R ++ D L P+ +VVANIPY I+ PL+ +LV
Sbjct: 66 DRDLVEGLQERFSGD---PRFDLTPGDVLAVPLPEAGIVVANIPYNITGPLLERLVGRLD 122
Query: 119 ---TKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPK 175
+ +R LL+Q+E R+ A PG S ++ L+V ++L+A V V R F P PK
Sbjct: 123 RPVAQPYRRLVLLMQQEVGERIRARPGSSAYSALSVRMQLLARCSTVCLVPPRCFQPPPK 182
Query: 176 VDSSVVIIRPKAEIPDVNLDEWRAFT-----RTCFSKKNKTLGATF 216
V S VV I P PD LD A T R CF+ + K L T
Sbjct: 183 VMSEVVAIDPLP--PDQQLDPALARTVETLLRRCFAARRKMLRNTL 226
>gi|145591594|ref|YP_001153596.1| dimethyladenosine transferase [Pyrobaculum arsenaticum DSM 13514]
gi|145283362|gb|ABP50944.1| dimethyladenosine transferase [Pyrobaculum arsenaticum DSM 13514]
Length = 228
Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 83/203 (40%), Positives = 118/203 (58%), Gaps = 11/203 (5%)
Query: 10 QHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILN 69
QH L ++ V + IV D V+E+GPGTG LT L E SK V+AIE+D+ + E L
Sbjct: 7 QHFLRDRSVAEFIVGLVPGGLD--VIEVGPGTGALTFPLAEKSKTVYAIELDKSLAEQLR 64
Query: 70 RRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLL 129
RA + + VI DAL+ E+P+ D V+N+PY I+SPL+ KL + A + +
Sbjct: 65 ARAPPN-----VVVIWGDALQVEWPKADFFVSNMPYSITSPLLLKL---ARHRLPAVVTV 116
Query: 130 QKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAEI 189
Q+E A R+ A PG E+ RL V ++ + +VE V + R F P PKV S+VV +RPKA
Sbjct: 117 QREVAERMAAVPGTEEYGRLTVAIQCMYEVEVVRVLPPRVFSPPPKVYSAVVTLRPKAPC 176
Query: 190 PDVNLDEWRAFTRTCFSKKNKTL 212
D + + + FT FS + KTL
Sbjct: 177 VD-DFEAFERFTAKLFSARRKTL 198
>gi|78189160|ref|YP_379498.1| dimethyladenosine transferase [Chlorobium chlorochromatii CaD3]
gi|119365013|sp|Q3ARC0.1|RSMA_CHLCH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|78171359|gb|ABB28455.1| dimethyladenosine transferase [Chlorobium chlorochromatii CaD3]
Length = 263
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 117/219 (53%), Gaps = 12/219 (5%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQ+ LT++ + V S PDD V+EIGPG G LT +L+E + IE D +
Sbjct: 15 KKLGQNFLTDRNITRKTVLLSGAKPDDQVVEIGPGFGALTRELVEECHNLTVIEKDPTLA 74
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDL------VVANIPYGISSPLVAKLVYGT 119
+ + ++ VI D L F ++ NIPY I+SP++ L+
Sbjct: 75 TFIRNE------YPQIKVIEGDVLTINFSAMAQAGKPLQILGNIPYSITSPILFHLLEHR 128
Query: 120 KSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSS 179
++FRSATL++Q E A RL A P E+ LAV ++ VE++ VS++ F P PKV+S+
Sbjct: 129 RAFRSATLMMQHEVALRLAAKPATKEYGILAVQMQAFCKVEYLFKVSRKVFKPQPKVESA 188
Query: 180 VVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
V+ + P A P ++ D +R F R F ++ KTL K+
Sbjct: 189 VIKLTPHATDPALDADGFRRFVRIAFHQRRKTLLNNLKE 227
>gi|331270584|ref|YP_004397076.1| dimethyladenosine transferase [Clostridium botulinum BKT015925]
gi|329127134|gb|AEB77079.1| dimethyladenosine transferase [Clostridium botulinum BKT015925]
Length = 281
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 82/222 (36%), Positives = 124/222 (55%), Gaps = 11/222 (4%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ LT+Q VLD IV S + +D V+EIGPG G LT +LL+ +KKV A+E+D
Sbjct: 17 FTKSLGQNFLTDQTVLDDIVDGSEVCEEDFVIEIGPGVGTLTKELLKKAKKVCAVELDSN 76
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFD------LVVANIPYGISSPLVAKLVY 117
++ IL + D +I KDALK +F + VVAN+PY +++P++A+L+
Sbjct: 77 LIPILQEELKE---FDNFQLIHKDALKIDFKELIGDEKSVKVVANLPYYVTTPIIARLLK 133
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
F+S T+++QKE A R+ + P E+ L++ V+ D + V F+P PKVD
Sbjct: 134 EGYKFKSLTIMIQKEVAERIASQPNCKEYGALSILVQYYCDTRIIRKVPPTCFIPQPKVD 193
Query: 178 SSVVIIRPKAEIPDVNLDEWRAF--TRTCFSKKNKTLGATFK 217
S ++ + E+ DE F R F+ + KTL K
Sbjct: 194 SIIIRLDRLNELRVKVKDEELFFKIVRQSFNMRRKTLRNAIK 235
>gi|199597856|ref|ZP_03211282.1| Dimethyladenosine transferase (rRNA methylation) [Lactobacillus
rhamnosus HN001]
gi|258509566|ref|YP_003172317.1| dimethyladenosine transferase [Lactobacillus rhamnosus GG]
gi|385829188|ref|YP_005866960.1| dimethyladenosine transferase [Lactobacillus rhamnosus GG]
gi|199591292|gb|EDY99372.1| Dimethyladenosine transferase (rRNA methylation) [Lactobacillus
rhamnosus HN001]
gi|257149493|emb|CAR88466.1| Dimethyladenosine transferase [Lactobacillus rhamnosus GG]
gi|259650833|dbj|BAI42995.1| dimethyladenosine transferase [Lactobacillus rhamnosus GG]
Length = 294
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 82/224 (36%), Positives = 127/224 (56%), Gaps = 19/224 (8%)
Query: 4 FH--KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
FH K GQ+ LT+ ++L IV + ++ D V+EIGPG G LT L + + +V A+EID
Sbjct: 20 FHMRKGLGQNFLTDPQILQKIVAAADVSEQDDVIEIGPGIGALTQFLADQAHQVVALEID 79
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPYGISSPL 111
+R++ IL AD + V+++D LKT + FD VVAN+PY I++P+
Sbjct: 80 DRLLPILAETLAD---YPNTTVVNEDVLKTNLTELVATHFDGNHTLKVVANLPYYITTPI 136
Query: 112 VAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFL 171
+ L+ S T+++QKE A RL A PG ++ L++ V+LVADV VS+ F+
Sbjct: 137 LLHLLRAHLPLHSMTVMMQKEVAARLSAVPGSKDYGSLSIAVQLVADVATAFTVSRHAFV 196
Query: 172 PCPKVDSSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTL 212
P P VDS++V + ++E P + +F R F+ + KTL
Sbjct: 197 PAPNVDSAIVTLTQRSE-PLATVQSPESFDRLVRGAFASRRKTL 239
>gi|187933536|ref|YP_001884370.1| dimethyladenosine transferase [Clostridium botulinum B str. Eklund
17B]
gi|187721689|gb|ACD22910.1| dimethyladenosine transferase [Clostridium botulinum B str. Eklund
17B]
Length = 283
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 125/219 (57%), Gaps = 15/219 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L ++ VL+ IV + +N +D ++EIGPG G LT KLL+ +K V IE+D
Sbjct: 19 FSKSLGQNFLLDESVLNDIVDGAEVNENDFIIEIGPGVGTLTAKLLQKAKMVTCIELDND 78
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL------VVANIPYGISSPLVAKLVY 117
++ IL + + G +D+ +I DALK +F + +VAN+PY +++P++ KL+
Sbjct: 79 LIPILQQ---ELGEYDKFELIHNDALKVDFNEIMKNEEHVKLVANLPYYVTTPIIVKLLK 135
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
F S T+++QKE A R+ A P E+ L+V V+ + + V VS F+P PKVD
Sbjct: 136 ENHKFESLTIMIQKEVAERINAEPNCKEYGALSVLVQYYCNTKIVRKVSPESFMPRPKVD 195
Query: 178 SSVV----IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTL 212
S V+ + P+ ++ D L R F+ + KTL
Sbjct: 196 SIVIRLDRLSNPRVKVQDEKL--LFDIVRAGFNMRRKTL 232
>gi|398901159|ref|ZP_10650110.1| dimethyladenosine transferase [Pseudomonas sp. GM50]
gi|398180278|gb|EJM67864.1| dimethyladenosine transferase [Pseudomonas sp. GM50]
Length = 272
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 123/227 (54%), Gaps = 16/227 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ H+++ GQ+ L + V+D I+R P+D +LEIGPG G LT LL+ ++ +E
Sbjct: 5 YQHRARKRFGQNFLHDAGVIDRILRSIHAKPEDRLLEIGPGQGALTKGLLDSGAQLDVVE 64
Query: 60 IDERMVEILNRR-AADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLV 112
+D+ ++ ILN++ A S FH + DALK +F P VV N+PY IS+PL+
Sbjct: 65 LDKDLIPILNQQFAGKSNFH----LHQGDALKFDFNSLNAAPNSLRVVGNLPYNISTPLI 120
Query: 113 AKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
L++ R +LQKE RL A PG ++ RL++ V+ VE + +V F P
Sbjct: 121 FHLLHNASLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNP 180
Query: 173 CPKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P A +P D R F+++ KTL T K
Sbjct: 181 PPKVDSAIVRLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNTLK 227
>gi|398841896|ref|ZP_10599102.1| dimethyladenosine transferase [Pseudomonas sp. GM102]
gi|398107260|gb|EJL97266.1| dimethyladenosine transferase [Pseudomonas sp. GM102]
Length = 272
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 119/218 (54%), Gaps = 13/218 (5%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQ+ L + V+D I+R P+D +LEIGPG G LT LL+ ++ +E+D+ ++ IL
Sbjct: 14 GQNFLHDAGVIDRILRSIHAKPEDRLLEIGPGQGALTKGLLDSGAQLDVVELDKDLIPIL 73
Query: 69 NRR-AADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLVAKLVYGTKS 121
N++ A+ S FH + DALK +F P VV N+PY IS+PL+ L++
Sbjct: 74 NQQFASKSNFH----LHQGDALKFDFNSLNAAPNSLRVVGNLPYNISTPLIFHLLHNASL 129
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
R +LQKE RL A PG ++ RL++ V+ VE + +V F P PKVDS++V
Sbjct: 130 IRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIV 189
Query: 182 IIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
+ P A +P D R F+++ KTL T K
Sbjct: 190 RLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNTLK 227
>gi|26554486|ref|NP_758420.1| dimethyladenosine transferase [Mycoplasma penetrans HF-2]
gi|33516937|sp|Q8EU92.1|RSMA_MYCPE RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|26454496|dbj|BAC44824.1| dimethyladenosine transferase [Mycoplasma penetrans HF-2]
Length = 272
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 130/233 (55%), Gaps = 15/233 (6%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
F + GQ+ L N+ + IV I PDD VLEIGPG G LT +L +K + +E+D
Sbjct: 18 FFASRKMGQNFLINENIKKKIVDSLEIKPDDHVLEIGPGFGALTKIVLSQTKNLTVVELD 77
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL-----VVANIPYGISSPLVAKLV 116
+R+VE L + + L +I+ D LK +F +F+ +++N+PY ISS ++ K++
Sbjct: 78 KRLVEFLKQE------YKELRIINIDVLKFDFKEFNKDTQYKIISNLPYSISSKIIFKIL 131
Query: 117 YGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKV 176
+F + L++QKE A R+ A G ++N V +++ ++++ + DVS F P P+V
Sbjct: 132 -KYANFSQSVLMVQKEMADRITAKVGTKKYNNFTVLLRITSEIKKLFDVSNNCFFPKPEV 190
Query: 177 DSSVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ---KKKVIELL 226
DS+V+ K + N ++ +F CFS+K KT+ K K+K+ E+
Sbjct: 191 DSTVISFERKKDFDFTNFEKLESFLLKCFSQKRKTIFNNLKNYFPKQKIEEVF 243
>gi|398875249|ref|ZP_10630427.1| dimethyladenosine transferase [Pseudomonas sp. GM67]
gi|398883045|ref|ZP_10638006.1| dimethyladenosine transferase [Pseudomonas sp. GM60]
gi|398197618|gb|EJM84594.1| dimethyladenosine transferase [Pseudomonas sp. GM60]
gi|398208179|gb|EJM94917.1| dimethyladenosine transferase [Pseudomonas sp. GM67]
Length = 272
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 122/227 (53%), Gaps = 16/227 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ HK++ GQ+ L + V+D I+R P+D +LEIGPG G LT LL ++ +E
Sbjct: 5 YQHKARKRFGQNFLHDAGVIDRILRSIHAKPEDRLLEIGPGQGALTQGLLNSGAQLDVVE 64
Query: 60 IDERMVEILNRR-AADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLV 112
+D+ ++ ILN++ A S F N+ DALK +F P VV N+PY IS+PL+
Sbjct: 65 LDKDLIPILNQQFAGKSNF----NLHQGDALKFDFNSLNAAPNSLRVVGNLPYNISTPLI 120
Query: 113 AKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
L++ R +LQKE RL A PG ++ RL++ V+ VE + +V F P
Sbjct: 121 FHLLHNAGIIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNP 180
Query: 173 CPKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P A +P D R F+++ KTL T K
Sbjct: 181 PPKVDSAIVRLVPHAVLPHPAKDHRLLERVVREAFNQRRKTLRNTLK 227
>gi|317969764|ref|ZP_07971154.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Synechococcus sp. CB0205]
Length = 278
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/227 (38%), Positives = 124/227 (54%), Gaps = 21/227 (9%)
Query: 5 HKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVS-KKVHAIEI 60
H+++ GQH L +Q VLD I++ + + DTVLE+GPG G LT +LLE S + V A+E+
Sbjct: 6 HRARKRFGQHWLKDQSVLDRILQAAELTAADTVLEVGPGRGALTERLLESSARAVCAVEL 65
Query: 61 DERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVY--- 117
D +V L R G + R ++ D L E P+ VVANIPY I+ PL+ +LV
Sbjct: 66 DRDLVSGLQER---FGANPRFSLTEGDVLAVELPEATAVVANIPYNITGPLLERLVGRLD 122
Query: 118 --GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPK 175
+ +R LL+Q+E R+ A PG S ++ L+V ++L+A V V R F P PK
Sbjct: 123 RPALQPYRRLVLLVQQEVGERIRARPGSSAYSALSVRMQLLARCSTVCPVPPRCFQPPPK 182
Query: 176 VDSSVVIIRPKAEIP-DVNLDEWRAFT-----RTCFSKKNKTLGATF 216
V S VV + P +P + LD A T R CF+ + K L T
Sbjct: 183 VMSEVVALDP---LPLEQRLDPALAKTVEMLLRRCFAARRKMLRNTL 226
>gi|193212495|ref|YP_001998448.1| dimethyladenosine transferase [Chlorobaculum parvum NCIB 8327]
gi|226729768|sp|B3QMU5.1|RSMA_CHLP8 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|193085972|gb|ACF11248.1| dimethyladenosine transferase [Chlorobaculum parvum NCIB 8327]
Length = 274
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 119/223 (53%), Gaps = 11/223 (4%)
Query: 1 YIFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEI 60
+I K GQ+ L ++ + IVR+S I D VLEIGPG G L+ +LEV AIE
Sbjct: 10 HIAAKKKLGQNFLLDKNIPRKIVRESGIKEGDLVLEIGPGFGALSTAILEVMPSFTAIEK 69
Query: 61 DERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFD-----LVVANIPYGISSPLVAKL 115
D + + H +N+I D LK V+ NIPY I+SP++ +L
Sbjct: 70 DPELARFIREE------HPEINLIEGDFLKVPLEPLTGSGKLAVLGNIPYSITSPILFRL 123
Query: 116 VYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPK 175
+ SATL++Q E A+R+ A PG E+ LAV ++ DV+++ V + F P P+
Sbjct: 124 LDNRHLIESATLMMQHEVAQRITAVPGTKEYGILAVQMQAFCDVKYLFKVGRAVFKPRPE 183
Query: 176 VDSSVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
VDS+V+ + PKA+ P + + +R F R F ++ KTL K+
Sbjct: 184 VDSAVIRLVPKAQNPVEDSEGFRTFVRRAFHQRRKTLWNNLKE 226
>gi|448313719|ref|ZP_21503432.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natronolimnobius innermongolicus JCM 12255]
gi|445597652|gb|ELY51726.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natronolimnobius innermongolicus JCM 12255]
Length = 363
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 120/210 (57%), Gaps = 10/210 (4%)
Query: 8 KGQHILTNQRVLDSI-VRKSSINPDDT-VLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
+ QH L + RVLD + + I+ D + +LEIG GTG LT +LL ++ +V +E D ++
Sbjct: 102 RDQHFLVDDRVLDRLPTYLTEIDADTSHLLEIGGGTGALTDRLLAIADEVTVVERDRKLA 161
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSA 125
L AD RL VI DAL+ P F V+N+PYG+SS + +L+ R
Sbjct: 162 AFLEAEFADEIDAGRLTVIEGDALEVALPDFTASVSNLPYGVSSEITFRLL---PEQRPL 218
Query: 126 TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP 185
L+ Q+EFA R++A PG SE+ RL+V+ + AD E V + K F P P V S+VV + P
Sbjct: 219 VLMFQQEFAERMVAQPGTSEYGRLSVSTQHYADAELVESIPKEAFSPPPAVQSAVVRLEP 278
Query: 186 KAEIPDVNLDE---WRAFTRTCFSKKNKTL 212
+A PD +D+ + F + F+++ KT+
Sbjct: 279 RA--PDYEVDDEAFFLRFVKALFTQRRKTI 306
>gi|227544731|ref|ZP_03974780.1| dimethyladenosine transferase [Lactobacillus reuteri CF48-3A]
gi|338203745|ref|YP_004649890.1| dimethyladenosine transferase [Lactobacillus reuteri SD2112]
gi|227185271|gb|EEI65342.1| dimethyladenosine transferase [Lactobacillus reuteri CF48-3A]
gi|336448985|gb|AEI57600.1| dimethyladenosine transferase [Lactobacillus reuteri SD2112]
Length = 297
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 126/221 (57%), Gaps = 17/221 (7%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS GQ+ LT+ VL +IV + I +D V+EIGPG G LT +L + + +V A+EID+ ++
Sbjct: 26 KSFGQNFLTDLNVLKNIVEAADITANDNVIEIGPGIGALTEQLAQAAGEVLALEIDQDLI 85
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDL-----------VVANIPYGISSPLVAK 114
+L + +D + VI++D L+ P+ VVAN+PY I+SP++
Sbjct: 86 PVLKEVLSP---YDNVKVINQDVLQANLPELIKKEFKDPSRPIKVVANLPYYITSPILMN 142
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
L+ + + +++QKE A+RL A PG ++ L + ++ + DVS++ F+P P
Sbjct: 143 LLASPVEWATICVMMQKEVAQRLTAKPGTKQYGELTLAIEYQMQAKIAFDVSRKVFVPSP 202
Query: 175 KVDSSVVIIRPKAE-IPDVNLDEWR--AFTRTCFSKKNKTL 212
VDS++V++ P+ +P D+ + F R CF+ + K+L
Sbjct: 203 NVDSAIVVLTPRTNPLPVQPFDKQKLFGFIRGCFAHRRKSL 243
>gi|398856717|ref|ZP_10612435.1| dimethyladenosine transferase [Pseudomonas sp. GM79]
gi|398242689|gb|EJN28296.1| dimethyladenosine transferase [Pseudomonas sp. GM79]
Length = 272
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 118/218 (54%), Gaps = 13/218 (5%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQ+ L + V+D I+R P+D +LEIGPG G LT LL ++ +E+D+ ++ IL
Sbjct: 14 GQNFLHDAGVIDRILRSIHAKPEDRLLEIGPGQGALTEGLLNSGAQLDVVELDKDLIPIL 73
Query: 69 NRR-AADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLVAKLVYGTKS 121
N++ A+ S FH + DALK +F P VV N+PY IS+PL+ L++
Sbjct: 74 NQQFASKSNFH----LHQGDALKFDFNSLNAAPNSLRVVGNLPYNISTPLIFHLLHNASL 129
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
R +LQKE RL A PG ++ RL++ V+ VE + +V F P PKVDS++V
Sbjct: 130 IRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIV 189
Query: 182 IIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
+ P A +P D R F+++ KTL T K
Sbjct: 190 RLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNTLK 227
>gi|423334290|ref|ZP_17312070.1| dimethyladenosine transferase [Lactobacillus reuteri ATCC 53608]
gi|337728098|emb|CCC03188.1| dimethyladenosine transferase [Lactobacillus reuteri ATCC 53608]
Length = 297
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 126/221 (57%), Gaps = 17/221 (7%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS GQ+ LT+ VL +IV + I +D V+EIGPG G LT +L + + +V A+EID+ ++
Sbjct: 26 KSFGQNFLTDLNVLKNIVEAADITANDNVIEIGPGIGALTEQLAQAAGEVLALEIDQDLI 85
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDL-----------VVANIPYGISSPLVAK 114
+L + +D + VI++D L+ P+ VVAN+PY I+SP++
Sbjct: 86 PVLKEVLSP---YDNVKVINQDVLQANLPELIKKEFKDPSRPIKVVANLPYYITSPILMN 142
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
L+ + + +++QKE A+RL A PG ++ L + ++ + DVS++ F+P P
Sbjct: 143 LLASPVEWATICVMMQKEVAQRLTAKPGTKQYGALTLAIEYQMQAKIAFDVSRKVFVPAP 202
Query: 175 KVDSSVVIIRPKAE-IPDVNLDEWR--AFTRTCFSKKNKTL 212
VDS++V++ P+ +P D+ + F R CF+ + K+L
Sbjct: 203 NVDSAIVVLTPRPNPLPVQPFDKQKLFGFIRGCFAHRRKSL 243
>gi|423093364|ref|ZP_17081160.1| dimethyladenosine transferase [Pseudomonas fluorescens Q2-87]
gi|397882263|gb|EJK98750.1| dimethyladenosine transferase [Pseudomonas fluorescens Q2-87]
Length = 272
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 123/227 (54%), Gaps = 16/227 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ H+++ GQ+ L + V+D I+R PDD +LEIGPG G LT LL+ ++ +E
Sbjct: 5 YQHRARKRFGQNFLHDPGVIDHILRSIHAKPDDRLLEIGPGQGALTEGLLDSGAQLDVVE 64
Query: 60 IDERMVEILNRR-AADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLV 112
+D+ +V ILN++ A+ S F N+ DALK +F P VV N+PY IS+PL+
Sbjct: 65 LDKDLVPILNQQFASRSNF----NLHQGDALKFDFNSLNAAPNSLRVVGNLPYNISTPLI 120
Query: 113 AKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
L+ R +LQKE RL A PG ++ RL++ V+ VE + +V F P
Sbjct: 121 FHLLSNAGLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNP 180
Query: 173 CPKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P A +P D R F+++ KTL T K
Sbjct: 181 PPKVDSAIVRLVPHAVLPHPAKDHRLLERVVREAFNQRRKTLRNTLK 227
>gi|399000542|ref|ZP_10703268.1| dimethyladenosine transferase [Pseudomonas sp. GM18]
gi|398129769|gb|EJM19125.1| dimethyladenosine transferase [Pseudomonas sp. GM18]
Length = 272
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 122/227 (53%), Gaps = 16/227 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ H+++ GQ+ L + V+D I+R P+D +LEIGPG G LT LL ++ +E
Sbjct: 5 YQHRARKRFGQNFLHDAGVIDRILRSIHAKPEDRLLEIGPGQGALTAGLLNSGAQLDVVE 64
Query: 60 IDERMVEILNRR-AADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLV 112
+D+ ++ ILN++ A S F N+ DALK +F P VV N+PY IS+PL+
Sbjct: 65 LDKDLIPILNQQFAGKSNF----NLHQGDALKFDFNSLNAAPNSLRVVGNLPYNISTPLI 120
Query: 113 AKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
L++ R +LQKE RL A PG ++ RL++ V+ VE + +V F P
Sbjct: 121 FHLLHNASLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNP 180
Query: 173 CPKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P A +P D R F+++ KTL T K
Sbjct: 181 PPKVDSAIVRLVPHAVLPHPAKDHRLLERVVREAFNQRRKTLRNTLK 227
>gi|182420084|ref|ZP_02951318.1| dimethyladenosine transferase [Clostridium butyricum 5521]
gi|237669472|ref|ZP_04529452.1| dimethyladenosine transferase [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182376121|gb|EDT73708.1| dimethyladenosine transferase [Clostridium butyricum 5521]
gi|237654916|gb|EEP52476.1| dimethyladenosine transferase [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 281
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/234 (37%), Positives = 131/234 (55%), Gaps = 18/234 (7%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + VL IV +S++ D ++EIGPG G LT KLL +KKV +IE+D
Sbjct: 19 FSKSLGQNFLIDDSVLTDIVDGASVDDKDFIIEIGPGVGTLTAKLLMKAKKVTSIELDND 78
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEF-------PQFDLVVANIPYGISSPLVAKLV 116
++ IL G H+ ++I DALK +F P LV AN+PY +++P++ KL+
Sbjct: 79 LIPILQEEL---GEHENFDLIHNDALKVDFNSLIGDEPSVKLV-ANLPYYVTTPIIVKLL 134
Query: 117 YGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKV 176
+F+S T+++QKE A R+ A P E+ L+V V+ + V V+ F+P PKV
Sbjct: 135 KDGYNFKSLTIMIQKEVAERINAEPNCKEYGALSVLVQYYCNTSIVRRVAPSCFIPRPKV 194
Query: 177 DSSVVIIRPKAEIPDVNLDEWR---AFTRTCFSKKNKTL---GATFKQKKKVIE 224
+ S+VI + E P VN+ + A R F+ + KTL TF K+ +E
Sbjct: 195 E-SIVIRLDRLEAPRVNVKDENLMFALVRAGFNMRRKTLWNATKTFNLSKEKLE 247
>gi|434403927|ref|YP_007146812.1| dimethyladenosine transferase [Cylindrospermum stagnale PCC 7417]
gi|428258182|gb|AFZ24132.1| dimethyladenosine transferase [Cylindrospermum stagnale PCC 7417]
Length = 271
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/221 (38%), Positives = 123/221 (55%), Gaps = 15/221 (6%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K QH L +++ LD+I++ + DD VLEIGPGTG LT +LL K + A+EID +
Sbjct: 6 KQFAQHWLKSEKALDAIIKAAECTKDDGVLEIGPGTGILTRRLLPAVKSLVAVEIDYDLC 65
Query: 66 EILNRRAADS-------GFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYG 118
++L ++ + G L++ S A F + + VVANIPY I+ P++ KL+ G
Sbjct: 66 KLLAKQLGKTENFLLLQGDFLTLDLASHLAAFPNFQKQNKVVANIPYNITGPIIEKLL-G 124
Query: 119 T------KSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
T + + S LL+QKE A RL A+PG F L+V V+ +A EF+ V F P
Sbjct: 125 TIANPNPEPYDSIVLLVQKEVAERLYANPGSRSFGALSVRVQYLAKCEFICTVPASAFQP 184
Query: 173 CPKVDSSVVIIRPKA-EIPDVNLDEWRAFTRTCFSKKNKTL 212
PKVDS+VV +RP+ EIP + ++ + F K K L
Sbjct: 185 PPKVDSAVVRLRPQTIEIPAHDPKKFENLVKLGFGAKRKML 225
>gi|148543450|ref|YP_001270820.1| dimethyladenosine transferase [Lactobacillus reuteri DSM 20016]
gi|184152859|ref|YP_001841200.1| dimethyladenosine transferase [Lactobacillus reuteri JCM 1112]
gi|227363600|ref|ZP_03847717.1| dimethyladenosine transferase [Lactobacillus reuteri MM2-3]
gi|325681794|ref|ZP_08161313.1| dimethyladenosine transferase [Lactobacillus reuteri MM4-1A]
gi|166987695|sp|A5VI09.1|RSMA_LACRD RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732591|sp|B2G5I8.1|RSMA_LACRJ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|148530484|gb|ABQ82483.1| dimethyladenosine transferase [Lactobacillus reuteri DSM 20016]
gi|183224203|dbj|BAG24720.1| dimethyladenosine transferase [Lactobacillus reuteri JCM 1112]
gi|227071396|gb|EEI09702.1| dimethyladenosine transferase [Lactobacillus reuteri MM2-3]
gi|324978885|gb|EGC15833.1| dimethyladenosine transferase [Lactobacillus reuteri MM4-1A]
Length = 297
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 126/221 (57%), Gaps = 17/221 (7%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS GQ+ LT+ VL +IV + I +D V+EIGPG G LT +L + + +V A+EID+ ++
Sbjct: 26 KSFGQNFLTDLNVLKNIVEAADITANDNVIEIGPGIGALTEQLAQAAGEVLALEIDQDLI 85
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDL-----------VVANIPYGISSPLVAK 114
+L + +D + VI++D L+ P+ VVAN+PY I+SP++
Sbjct: 86 PVLKEVLSP---YDDVKVINQDVLQANLPELIKKEFKDPSRPIKVVANLPYYITSPILMN 142
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
L+ + + +++QKE A+RL A PG ++ L + ++ + DVS++ F+P P
Sbjct: 143 LLASPVEWATICVMMQKEVAQRLTAKPGTKQYGALTLAIEYQMQAKIAFDVSRKVFVPAP 202
Query: 175 KVDSSVVIIRPKAE-IPDVNLDEWR--AFTRTCFSKKNKTL 212
VDS++V++ P+ +P D+ + F R CF+ + K+L
Sbjct: 203 NVDSAIVVLTPRTNPLPVQPFDKQKLFGFIRGCFAHRRKSL 243
>gi|225680654|gb|EEH18938.1| dimethyladenosine transferase [Paracoccidioides brasiliensis Pb03]
Length = 291
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 96/163 (58%)
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
M + +R RL V+ D +KT+ P FD+ ++N PY ISSPL KL+ + R
Sbjct: 1 MAAEVTKRVQGKPEQKRLEVLLGDVIKTDLPYFDVCISNTPYQISSPLTFKLLATNPAPR 60
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
L+ Q+EFA RL A PGD +NRL+VN ++ A ++ +M V K +F P P V+SSVV I
Sbjct: 61 VCILMFQREFAMRLFAKPGDKLYNRLSVNAQMWARIDHIMKVGKNNFKPPPAVESSVVRI 120
Query: 184 RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
PK P ++ DEW R F +KNKT+ ++F V+++L
Sbjct: 121 VPKNPRPQISYDEWDGLLRIAFVRKNKTIRSSFLGTTSVLDML 163
>gi|47459399|ref|YP_016261.1| dimethyladenosine transferase [Mycoplasma mobile 163K]
gi|62900531|sp|Q6KH80.1|RSMA_MYCMO RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|47458729|gb|AAT28050.1| dimethyladenosine transferase rRNA modification enzyme [Mycoplasma
mobile 163K]
Length = 254
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 128/216 (59%), Gaps = 7/216 (3%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L ++ +++ IV + +D VLEIGPG G LT L++ SK V A EID+
Sbjct: 5 FKKSLGQNFLQDKNIIEKIVNFIPLENED-VLEIGPGQGALTNLLVKKSKNVLAYEIDKE 63
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTE--FPQFDLVVANIPYGISSPLVAKLVYGTKS 121
++ L + F + +D LK+E F +++ANIPY I+S ++ K+ K
Sbjct: 64 LIPFLKEKIKAKNFTLK----HEDFLKSEIDFQDKKIIIANIPYFITSDILFKIFENHKF 119
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
F A +++QKE A +L+A DS + +L+V+ + A+++ V++V + F P P VDS+VV
Sbjct: 120 FTKALIMVQKEIADKLIAKANDSNYGKLSVSSQFFANIKKVINVPRTCFYPQPNVDSAVV 179
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
K +I +++++++ F +TCFS++ K L K
Sbjct: 180 YFEFKNDIENIDIEKFLVFIKTCFSQQRKKLSNNLK 215
>gi|194467627|ref|ZP_03073614.1| dimethyladenosine transferase [Lactobacillus reuteri 100-23]
gi|194454663|gb|EDX43560.1| dimethyladenosine transferase [Lactobacillus reuteri 100-23]
Length = 297
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 127/225 (56%), Gaps = 17/225 (7%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I KS GQ+ LT+ VL +IV + I +D V+EIGPG G LT +L + + +V A+EID
Sbjct: 22 IHTKKSFGQNFLTDLNVLKNIVEAADITDNDNVIEIGPGIGALTEQLAQAAGEVLALEID 81
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL-----------VVANIPYGISSP 110
+ ++ +L + +D + VI++D L+ P+ VVAN+PY I+SP
Sbjct: 82 QDLIPVLKEVLSP---YDNVKVINQDVLQANLPELIKKEFKDPSRPIKVVANLPYYITSP 138
Query: 111 LVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDF 170
++ L+ + + +++QKE A+RL A PG ++ L + ++ + DVS++ F
Sbjct: 139 ILMNLLASPVEWATICVMMQKEVAQRLTAKPGTKQYGALTLAIEYQMQAKIAFDVSRKVF 198
Query: 171 LPCPKVDSSVVIIRPKAE-IPDVNLDEWR--AFTRTCFSKKNKTL 212
+P P VDS++V++ P+ +P D+ + F R CF+ + K+L
Sbjct: 199 VPSPNVDSAIVVLTPRTNPLPVQPFDKQKLFGFIRGCFAHRRKSL 243
>gi|114328859|ref|YP_746016.1| dimethyladenosine transferase [Granulibacter bethesdensis CGDNIH1]
gi|114317033|gb|ABI63093.1| dimethyladenosine transferase [Granulibacter bethesdensis CGDNIH1]
Length = 286
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 116/224 (51%), Gaps = 19/224 (8%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLE-VSKKVHAIEIDERM 64
K+ GQH L + ++ IVR++ T +EIGPG G LT LLE +++V AIE+D R
Sbjct: 32 KALGQHFLLDPHLMARIVREAGPMQGRTAIEIGPGPGGLTRALLETAAERVVAIELDHRA 91
Query: 65 VEILNRRAADSGFH-DRLNVISKDALKTEFPQFDL----VVANIPYGISSPLVAKLVYGT 119
+ L A GF+ DRL V+ DA++ + +VAN+PY + +PL+ +
Sbjct: 92 IPALEELA---GFYPDRLTVLEADAMRADLGTLTTGPRRIVANLPYNVGTPLLVGWLRQA 148
Query: 120 KSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSS 179
F S TL+ Q+E A R+ A+PG + RL V + VE +M V F P PKV S+
Sbjct: 149 ALFESMTLMFQQEVAERICAAPGSDAYGRLGVLAQWTCRVEMLMSVPPGAFHPPPKVYSA 208
Query: 180 VVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVI 223
V + P+ E P L F+ + A F Q++K++
Sbjct: 209 VAALWPREEQPSPAL----------FTAMERVTAAAFGQRRKML 242
>gi|119511388|ref|ZP_01630500.1| 16S rRNA dimethylase [Nodularia spumigena CCY9414]
gi|119463933|gb|EAW44858.1| 16S rRNA dimethylase [Nodularia spumigena CCY9414]
Length = 275
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/225 (38%), Positives = 125/225 (55%), Gaps = 22/225 (9%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSIN-PDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERM 64
KS QH L +++ LD+I++ + + DD VLEIGPGTG LT +LL + + + A+EID
Sbjct: 6 KSFAQHWLKSEKALDAIIKAAECHQSDDRVLEIGPGTGILTRRLLPLVRSLVAVEID--- 62
Query: 65 VEILNRRAADSGFHDRLNVISKDALKTEFP----------QFDLVVANIPYGISSPLVAK 114
++ + A G + ++ D L + P Q + VVANIPY I+ P++ K
Sbjct: 63 FDLCKQLAKQLGKKENFLLLQGDFLTLDLPSHLAPFPNFQQPNKVVANIPYNITGPIIEK 122
Query: 115 LVYGT------KSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKR 168
L+ GT + F S LL+QKE A RL A PG F L+V V+ +AD EF+ V
Sbjct: 123 LL-GTIANPNPEPFDSIVLLVQKEVADRLYAHPGSRTFGALSVRVQYLADCEFICTVPAG 181
Query: 169 DFLPCPKVDSSVVIIRPKA-EIPDVNLDEWRAFTRTCFSKKNKTL 212
F P PKVDS+VV +RP+ E P +N ++ + FS K K L
Sbjct: 182 AFYPPPKVDSAVVRLRPRTIETPALNPRKFENLVKLGFSAKRKML 226
>gi|420157495|ref|ZP_14664328.1| dimethyladenosine transferase [Clostridium sp. MSTE9]
gi|394756051|gb|EJF39190.1| dimethyladenosine transferase [Clostridium sp. MSTE9]
Length = 287
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 123/221 (55%), Gaps = 16/221 (7%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K+ GQ+ L N V + +S P+ VLE+GPG G LT +L E ++KV +IE+D R
Sbjct: 21 FSKALGQNFLINPTVCPRMAEQSGAAPETGVLEVGPGIGVLTRELAERAQKVVSIELDRR 80
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKT--------EFPQFDL-VVANIPYGISSPLVAK 114
++ +L AD +D + V++ D LK EF + V AN+PY I+SP++ +
Sbjct: 81 LLPVLEETLAD---YDNVTVVNGDILKLDLKELLQREFAGMPVSVCANLPYYITSPVIMR 137
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
L+ S T+++QKE ARR+ A PG E + V V A+ E + +VS+ FLP P
Sbjct: 138 LLEERLDITSLTVMVQKEAARRICAQPGTRECGAVTVAVHYYAEPEILFEVSRGSFLPAP 197
Query: 175 KVDSSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTL 212
VDSSV+ + + E P V ++ F RT F ++ KT+
Sbjct: 198 NVDSSVIRLTLRKE-PAVRVENEAGFFSLVRTAFGQRRKTM 237
>gi|448309394|ref|ZP_21499255.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natronorubrum bangense JCM 10635]
gi|445590699|gb|ELY44912.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natronorubrum bangense JCM 10635]
Length = 280
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 117/210 (55%), Gaps = 10/210 (4%)
Query: 8 KGQHILTNQRVLDSI-VRKSSINPDDT-VLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
+ QH L + RVLD + ++ D T +LEIG GTG LT +LLE++ +V +E D +
Sbjct: 19 RDQHFLVDDRVLDRLPTYLPELDADTTHLLEIGGGTGVLTDRLLEIADEVTVVERDRTLA 78
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSA 125
L AD RL VI DAL+ E P F V+N+PYG+SS + +L+ R
Sbjct: 79 AFLREEFADEIAVGRLTVIEGDALEVELPPFTASVSNLPYGVSSEITFRLL---PEQRPL 135
Query: 126 TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP 185
L+ Q+EFA R++A PG E+ RL+V+ + AD E V + K F P P V S+VV + P
Sbjct: 136 VLMFQQEFAERMVAEPGTPEYGRLSVSTQHYADAELVESIPKEAFSPPPAVQSAVVRLEP 195
Query: 186 KAEIPDVNLDEWRAFTR---TCFSKKNKTL 212
+ PD +D+ F R F+++ KT+
Sbjct: 196 RD--PDYEVDDEEFFLRFVKALFTQRRKTI 223
>gi|17230721|ref|NP_487269.1| dimethyladenosine transferase [Nostoc sp. PCC 7120]
gi|27151584|sp|Q8YS62.1|RSMA_NOSS1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|17132324|dbj|BAB74928.1| rRNA (adenine-N6,N6)-dimethyltransferase [Nostoc sp. PCC 7120]
Length = 271
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/221 (39%), Positives = 122/221 (55%), Gaps = 21/221 (9%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
QH L +++ LD+IV+ + + +D +LEIGPGTG LT +LL + + A+EID + E+L
Sbjct: 9 AQHWLKSEKALDAIVKAAECSTNDRILEIGPGTGILTRRLLPAVQSLVAVEIDRDLCELL 68
Query: 69 NRRAADSGFHDRLNVISKDALKTE-------FPQF---DLVVANIPYGISSPLVAKLVYG 118
A G + ++ D L + FP+F + VVANIPY I+ P++ KL+ G
Sbjct: 69 ---AKQLGKKENFLLLQGDFLTIDLAANLGSFPKFQKPNKVVANIPYNITGPIIEKLL-G 124
Query: 119 TKS------FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
T S F S LL+QKE A RL A G F L+V V+ +AD EF+ DV F P
Sbjct: 125 TISNPNLEPFDSIVLLIQKEVAERLYAKSGSRTFGALSVRVQYLADCEFICDVPASAFHP 184
Query: 173 CPKVDSSVVIIRPKA-EIPDVNLDEWRAFTRTCFSKKNKTL 212
PKVDS+VV +RP+ EIP + + F K K L
Sbjct: 185 PPKVDSAVVRLRPRQIEIPVNDPKRLENLVKLGFGAKRKML 225
>gi|407979101|ref|ZP_11159923.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus sp. HYC-10]
gi|407414317|gb|EKF35970.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus sp. HYC-10]
Length = 292
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 127/222 (57%), Gaps = 17/222 (7%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + +LD IV + I + V+EIGPG G LT +L + +KKV A EID+R
Sbjct: 22 FKKSLGQNFLIDTNILDRIVDHAEITDETGVIEIGPGIGALTEQLAKRAKKVTAFEIDQR 81
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEF-----PQFD-----LVVANIPYGISSPLVA 113
++ ILN + +D + +I +D LK + QF +VVAN+PY +++P++
Sbjct: 82 LLPILNDTLSP---YDNVTIIHQDVLKADVRKVMEEQFADCKEVMVVANLPYYVTTPIIM 138
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
KL+ + ++LQKE A R+ A+P E+N L++ V+ + + VM V K F+P
Sbjct: 139 KLLEENLPLKGIVVMLQKEVADRMAAAPSSKEYNSLSIAVQFYTEAKTVMVVPKTVFVPQ 198
Query: 174 PKVDSSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTL 212
P VDS+V+ + + E P V++D F R F ++ KTL
Sbjct: 199 PNVDSAVIKLTVR-ETPAVSVDNDAFFFQLIRASFGQRRKTL 239
>gi|404372839|ref|ZP_10978121.1| ribosomal RNA small subunit methyltransferase A [Clostridium sp.
7_2_43FAA]
gi|226914216|gb|EEH99417.1| ribosomal RNA small subunit methyltransferase A [Clostridium sp.
7_2_43FAA]
Length = 281
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 129/218 (59%), Gaps = 13/218 (5%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + V IV + ++ +D V+EIGPG G LT +LL +KKV AIE+D
Sbjct: 19 FSKSLGQNFLIDDSVPRDIVAGAEVDENDLVIEIGPGVGTLTAQLLNKAKKVVAIELDND 78
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFD------LVVANIPYGISSPLVAKLVY 117
++ ILN+ D + + +I KDALK F + +VAN+PY +++P++ KL+
Sbjct: 79 LIPILNQEIGD---NPKFTLIHKDALKVNFNEIIGEEKSVKLVANLPYYVTTPIIVKLLK 135
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
+F+S T+++QKE A R+ A+PG+ ++ L++ V+ + + V V + F+P PKVD
Sbjct: 136 EGYNFKSLTIMIQKEVAERMNANPGNKDYGSLSLLVQYYCNTKIVRRVPPQCFIPRPKVD 195
Query: 178 SSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTL 212
S V+ + +E P V ++ + F R F+ + KTL
Sbjct: 196 SIVIRLDKLSE-PKVKVENEKLFFDIIRNSFNMRRKTL 232
>gi|323340527|ref|ZP_08080782.1| dimethyladenosine transferase [Lactobacillus ruminis ATCC 25644]
gi|417972535|ref|ZP_12613433.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Lactobacillus ruminis ATCC 25644]
gi|323092071|gb|EFZ34688.1| dimethyladenosine transferase [Lactobacillus ruminis ATCC 25644]
gi|346331108|gb|EGX99329.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Lactobacillus ruminis ATCC 25644]
Length = 296
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 126/221 (57%), Gaps = 15/221 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ LT+ +L IV + + +D V+EIGPG G LT +L + + +V A+EID R
Sbjct: 25 FKKSLGQNFLTDLNILKKIVAAAEVGEEDDVIEIGPGIGALTEQLAKSAHQVMALEIDSR 84
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQ-----FD-----LVVANIPYGISSPLVA 113
++ +L+ + +D + ++ +D LK + + FD +VAN+PY I++P+V
Sbjct: 85 LIPVLSETLSP---YDNVKIVEQDVLKADLKELIAQNFDGRHKIKLVANLPYYITTPIVM 141
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ F + +++QKE A RL A PG ++ L+V V+ D + V K F+P
Sbjct: 142 HLLEVDVDFETIVVMMQKEVADRLAAQPGTKDYGSLSVAVQYEMDAKIAFIVPKTVFMPQ 201
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTL 212
PKVDS+++ + K E PDV +DE ++ + F + K+L
Sbjct: 202 PKVDSAIIALNRKDEKPDVPVDEPFFKKMVKGIFLHRRKSL 242
>gi|448303158|ref|ZP_21493108.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natronorubrum sulfidifaciens JCM 14089]
gi|445594165|gb|ELY48332.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natronorubrum sulfidifaciens JCM 14089]
Length = 280
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 120/210 (57%), Gaps = 10/210 (4%)
Query: 8 KGQHILTNQRVLDSI-VRKSSINPDDT-VLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
+ QH L + RVLD + ++++ D + +LEIG GTG LT +LLE++ +V +E D +
Sbjct: 19 RDQHFLVDDRVLDRLPTYLTALDADTSHLLEIGGGTGVLTDRLLEIADEVTVVERDRELA 78
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSA 125
L AD L VI DAL+ E P F V+N+PYG+SS + +L+ R
Sbjct: 79 AFLTEEFADEVAAGELTVIEGDALEVELPDFTASVSNLPYGVSSEITFRLL---PEGRPL 135
Query: 126 TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP 185
L+ Q+EFA R++A PG +E+ RL+V+ + AD E V + K F P P V S+VV + P
Sbjct: 136 VLMFQQEFAERMVAEPGTAEYGRLSVSTQHYADAELVESIPKEAFSPPPAVQSAVVRLEP 195
Query: 186 KAEIPDVNLDE---WRAFTRTCFSKKNKTL 212
+ P+ +D+ + F + F+++ KT+
Sbjct: 196 RE--PEYEVDDEDFFLRFVKALFTQRRKTI 223
>gi|443897390|dbj|GAC74731.1| ribosomal RNA adenine dimethylase [Pseudozyma antarctica T-34]
Length = 240
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 97/147 (65%)
Query: 80 RLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLLQKEFARRLLA 139
+L+++ D KTE P FD+ ++N PY ISSPLV KL+ FR A L+ Q+EFA RL+A
Sbjct: 34 KLDIMIGDFCKTELPYFDVCISNTPYQISSPLVFKLLSHRPLFRCAILMFQREFALRLIA 93
Query: 140 SPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAEIPDVNLDEWRA 199
PGD+ + RL+ NV+L + V+ +M VS+ F P P+V+SSVV I P P + +E+
Sbjct: 94 RPGDNLWCRLSANVQLYSKVDHIMKVSRNSFRPPPQVESSVVRITPLNPPPAIPFEEFDG 153
Query: 200 FTRTCFSKKNKTLGATFKQKKKVIELL 226
TR FS++NKT+ A+F + VI++L
Sbjct: 154 LTRIVFSRRNKTVRASFFDARGVIDML 180
>gi|71894379|ref|YP_278487.1| dimethyladenosine transferase [Mycoplasma synoviae 53]
gi|119365036|sp|Q4A645.1|RSMA_MYCS5 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|71851167|gb|AAZ43776.1| dimethyladenosine transferase [Mycoplasma synoviae 53]
Length = 259
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 127/214 (59%), Gaps = 9/214 (4%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS GQ+ L ++ +++ IV +I ++ VLEIGPG G+LT +LL+ +KKV A EID+ ++
Sbjct: 10 KSLGQNFLRDKNIINKIVNVFNI-ENEKVLEIGPGQGDLTKELLKKAKKVLAFEIDKSLI 68
Query: 66 EILNRRAADSGF----HDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
E L D F D LNV D EF + VVANIPY I+S ++ K+ +
Sbjct: 69 EHLKNEIKDLHFELRDQDFLNVNLND---DEFKDY-YVVANIPYYITSDILLKIYRSFWN 124
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
F+ L++QKE A+R++A +++L+++ + +ADV+ V+K F+P PKVDS+V+
Sbjct: 125 FKGIVLMVQKEVAQRIVAQKNSKNYSKLSISSQYLADVKIEFIVNKNSFIPAPKVDSAVI 184
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGAT 215
++ K I NL++ F CF+ + K L T
Sbjct: 185 SLKFKDNIDKENLEKMLKFFLVCFANRRKKLTFT 218
>gi|395646265|ref|ZP_10434125.1| Ribosomal RNA small subunit methyltransferase A [Methanofollis
liminatans DSM 4140]
gi|395443005|gb|EJG07762.1| Ribosomal RNA small subunit methyltransferase A [Methanofollis
liminatans DSM 4140]
Length = 258
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 113/205 (55%), Gaps = 6/205 (2%)
Query: 10 QHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILN 69
QH L ++R ++ IV S ++ VLEIGPG G LT LL+ KV AIE+D +VE L
Sbjct: 7 QHFLRDRRAIERIVALSEVS-GRNVLEIGPGEGVLTAALLQAGAKVTAIELDPSLVEGLE 65
Query: 70 RRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLL 129
R A +I DA++ +P FD+VVAN+PY SSP+ +L+ F A L+
Sbjct: 66 ERFAGEIRAGTFTLIHGDAVRVPYPAFDIVVANLPYSASSPITFRLL--DAGFERAVLMY 123
Query: 130 QKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAEI 189
Q+EFA R+ A G E RL+V V+ A+V+ ++ F P P+V S+VV + P E
Sbjct: 124 QREFAERMAAPVGTPECGRLSVMVQTYAEVKLCFNLPPGAFSPPPQVASTVVRLTPH-EP 182
Query: 190 PDVNLDE--WRAFTRTCFSKKNKTL 212
P D + A R FS + KT+
Sbjct: 183 PHYIADREVYAAVVRELFSHRRKTV 207
>gi|295425701|ref|ZP_06818388.1| dimethyladenosine transferase [Lactobacillus amylolyticus DSM
11664]
gi|295064717|gb|EFG55638.1| dimethyladenosine transferase [Lactobacillus amylolyticus DSM
11664]
Length = 292
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 121/233 (51%), Gaps = 18/233 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+F K+K GQ+ L +Q + IV + I D V+EIGPG G+LT +LL KV A E
Sbjct: 20 YFVKAKKNLGQNFLVDQNAILGIVNAADIQEGDQVIEIGPGIGSLTEQLLLHGAKVFAYE 79
Query: 60 IDERMVEILNR----RAADSGFHDRLNVISKDALKTEFPQ-----FDL-----VVANIPY 105
+D+ + +IL + D R +++ KD L+ +F + FD VVAN+PY
Sbjct: 80 VDDSLPKILQNELPAKIGDQPLDQRFHLLLKDVLQADFKKDIGAFFDFSQPIKVVANLPY 139
Query: 106 GISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDV 165
I++P++ L F S TL++QKE A RL A G + L + + VE + V
Sbjct: 140 YITTPIIFALAESDLRFASLTLMMQKEVAERLEAKTGSKAYGPLTIATQTRMHVELALQV 199
Query: 166 SKRDFLPCPKVDSSVVIIRPKAEIPDVN-LDEWRAFTRTCFSKKNKTLGATFK 217
F+P PKVDSSVV++ P PDV + + CF+++ KTL K
Sbjct: 200 DHTSFMPRPKVDSSVVVLTPIEHKPDVGRRAHFNKVVKMCFAQRRKTLNNNLK 252
>gi|398983244|ref|ZP_10689916.1| dimethyladenosine transferase [Pseudomonas sp. GM24]
gi|399011946|ref|ZP_10714275.1| dimethyladenosine transferase [Pseudomonas sp. GM16]
gi|398116956|gb|EJM06712.1| dimethyladenosine transferase [Pseudomonas sp. GM16]
gi|398157430|gb|EJM45819.1| dimethyladenosine transferase [Pseudomonas sp. GM24]
Length = 272
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/228 (36%), Positives = 122/228 (53%), Gaps = 16/228 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ HK++ GQ+ L + V+D I+R S +D +LEIGPG G LT LL ++ +E
Sbjct: 5 YQHKARKRFGQNFLHDAGVIDRILRSISAKSEDRLLEIGPGQGALTAGLLSSGAQLDVVE 64
Query: 60 IDERMVEILNRR-AADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLV 112
+D+ ++ ILN++ A S F N+ DALK +F P VV N+PY IS+PL+
Sbjct: 65 LDKDLIPILNQQFAGKSNF----NLHQGDALKFDFNTLNAAPNSLRVVGNLPYNISTPLI 120
Query: 113 AKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
L+ R +LQKE RL A PG ++ RL++ V+ VE + +V F P
Sbjct: 121 FHLLNNAGIIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNP 180
Query: 173 CPKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFKQ 218
PKVDS++V + P A +P D R F+++ KTL T KQ
Sbjct: 181 PPKVDSAIVRLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNTLKQ 228
>gi|154482621|ref|ZP_02025069.1| hypothetical protein EUBVEN_00288 [Eubacterium ventriosum ATCC
27560]
gi|149736521|gb|EDM52407.1| dimethyladenosine transferase [Eubacterium ventriosum ATCC 27560]
Length = 288
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/221 (35%), Positives = 125/221 (56%), Gaps = 16/221 (7%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K GQ+ L + VL+SI+R + I DD VLEIGPG G +T L E +++V A+EID+
Sbjct: 21 FQKKFGQNFLIDSNVLESIIRGAEITKDDFVLEIGPGIGTMTQYLCEAARQVVAVEIDKM 80
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL---------VVANIPYGISSPLVAK 114
++ IL ++ +D + VI++D LK + VVAN+PY I++P++
Sbjct: 81 LIPILEDTLSE---YDNVEVINQDVLKVDIKSLAEEKNNGKPIKVVANLPYYITTPIIMG 137
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
L S T+++QKE A R+ PG ++ L++ V+ A + +++VS F+P P
Sbjct: 138 LFESGVPIDSITIMVQKEVADRMQTGPGSKDYGALSLAVQYYATAKVILNVSATCFMPRP 197
Query: 175 KVDSSVVIIRPKAEIPDVNL-DEWRAF--TRTCFSKKNKTL 212
VDS+V+ + E P VN+ DE F R F+++ KTL
Sbjct: 198 NVDSAVIKLTRHKE-PTVNVADEKLMFKIIRASFNQRRKTL 237
>gi|408479337|ref|ZP_11185556.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas sp. R81]
Length = 270
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/226 (35%), Positives = 120/226 (53%), Gaps = 14/226 (6%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ H+++ GQ+ L + V+D I+R P+D +LEIGPG G LT LL ++ +E
Sbjct: 5 YQHRARKRFGQNFLHDAGVIDRILRSIHAKPEDRLLEIGPGQGALTQGLLASGGQLDVVE 64
Query: 60 IDERMVEILNRRAADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLVA 113
+D+ ++ ILN++ AD N+ DALK +F P VV N+PY IS+PL+
Sbjct: 65 LDKDLIPILNQQFADK---PNFNLHQGDALKFDFNTLNAAPNSLRVVGNLPYNISTPLIF 121
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ R +LQKE RL A PG ++ RL++ V+ VE + +V F P
Sbjct: 122 HLLNNAGIIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPP 181
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P A +P D R F+++ KTL T K
Sbjct: 182 PKVDSAIVRLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNTLK 227
>gi|424925257|ref|ZP_18348618.1| dimethyladenosine transferase [Pseudomonas fluorescens R124]
gi|404306417|gb|EJZ60379.1| dimethyladenosine transferase [Pseudomonas fluorescens R124]
Length = 272
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/235 (35%), Positives = 123/235 (52%), Gaps = 16/235 (6%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ HK++ GQ+ L + V+D I+R S D +LEIGPG G LT LL ++ +E
Sbjct: 5 YQHKARKRFGQNFLHDAGVIDRILRSISAKSGDRMLEIGPGQGALTAGLLNSGAQLDVVE 64
Query: 60 IDERMVEILNRR-AADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLV 112
+D+ ++ ILN++ A S F N+ DALK +F P VV N+PY IS+PL+
Sbjct: 65 LDKDLIPILNQQFAGKSNF----NLHQGDALKFDFNTLNAAPNSLRVVGNLPYNISTPLI 120
Query: 113 AKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
L+ R +LQKE RL A PG ++ RL++ V+ VE + +V F P
Sbjct: 121 FHLLNNAGIIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNP 180
Query: 173 CPKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFKQKKKVIEL 225
PKVDS++V + P A +P D R F+++ KTL T KQ E+
Sbjct: 181 PPKVDSAIVRLVPHAVLPHPAKDHRLLERVVREAFNQRRKTLRNTLKQLMTAAEI 235
>gi|423613668|ref|ZP_17589528.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD107]
gi|401241357|gb|EJR47748.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD107]
Length = 291
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 125/220 (56%), Gaps = 15/220 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + VL+ IV + + P+ +EIGPG G LT +L + +KKV A EID+R
Sbjct: 21 FKKSLGQNFLIDTNVLNRIVDYAEVGPESGAIEIGPGIGALTEQLAKRAKKVLAFEIDQR 80
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEF-----PQFD-----LVVANIPYGISSPLVA 113
++ IL+ A G + VI+KD LK + QF+ +VVAN+PY +++P++
Sbjct: 81 LLPILDETLAPYG---NVTVINKDVLKADVHEVFGEQFEEGQDVMVVANLPYYVTTPILF 137
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
KL+ R +++QKE RL A PG E+ L++ ++ +VE VM V + F+P
Sbjct: 138 KLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVFVPQ 197
Query: 174 PKVDSSVV--IIRPKAEIPDVNLDEWRAFTRTCFSKKNKT 211
P VDS+V+ + RPK + + + R F+++ KT
Sbjct: 198 PNVDSAVIRLLKRPKPVVEVTDEAFFFEVVRASFAQRRKT 237
>gi|407368273|ref|ZP_11114805.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas mandelii JR-1]
Length = 272
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 123/227 (54%), Gaps = 16/227 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ H+++ GQ+ L + V+D I+R P+D +LEIGPG G LT LL ++ +E
Sbjct: 5 YQHRARKRFGQNFLHDAGVIDRILRSIHAKPEDRLLEIGPGQGALTQGLLGSGAQLDVVE 64
Query: 60 IDERMVEILNRR-AADSGFHDRLNVISKDALKTEFPQFDL------VVANIPYGISSPLV 112
+D+ ++ ILN++ A S F N+ DALK +F + VV N+PY IS+PL+
Sbjct: 65 LDKDLIPILNQQFAGKSNF----NLHQGDALKFDFNSLNAAPGSLRVVGNLPYNISTPLI 120
Query: 113 AKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
L++ R +LQKE +R+ A PG ++ RL++ V+ VE + +V F P
Sbjct: 121 FHLLHNASLIRDMHFMLQKEVVQRMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNP 180
Query: 173 CPKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P A +P D R F+++ KTL T K
Sbjct: 181 PPKVDSAIVRLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNTLK 227
>gi|335998358|ref|ZP_08564270.1| dimethyladenosine transferase [Lactobacillus ruminis SPM0211]
gi|335348872|gb|EGM50373.1| dimethyladenosine transferase [Lactobacillus ruminis SPM0211]
Length = 296
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 126/221 (57%), Gaps = 15/221 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ LT+ +L IV + + +D V+EIGPG G LT +L + + +V A+EID R
Sbjct: 25 FKKSLGQNFLTDLNILKKIVAAAEVGEEDDVIEIGPGIGALTEQLAKSAHQVMALEIDSR 84
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQ-----FD-----LVVANIPYGISSPLVA 113
++ +L+ + +D + ++ +D LK + + FD +VAN+PY I++P+V
Sbjct: 85 LIPVLSETLSP---YDNVKIVEQDVLKADLKELIAQNFDGRHKIKLVANLPYYITTPIVM 141
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ F + +++QKE A RL A PG ++ L+V V+ D + V K F+P
Sbjct: 142 HLLDVDVDFETIVVMMQKEVADRLAAQPGTKDYGSLSVAVQYEMDAKIAFIVPKTVFMPQ 201
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTL 212
PKVDS+++ + K E PDV +DE ++ + F + K+L
Sbjct: 202 PKVDSAIIALNRKDEKPDVPVDEPFFKKMVKGIFLHRRKSL 242
>gi|452995111|emb|CCQ93252.1| dimethyladenosine 16S ribosomal RNA transferase [Clostridium
ultunense Esp]
Length = 289
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 128/218 (58%), Gaps = 12/218 (5%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + ++ I ++ +I +D VLEIGPG G LT +L +KKV A+E+D+
Sbjct: 23 FSKSLGQNFLIDGNIVRKIGQEGNITKEDYVLEIGPGIGTLTEELALNAKKVVAVELDKS 82
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL---------VVANIPYGISSPLVAK 114
++ IL+ D + + +I D L+ + + VVAN+PY +++P++AK
Sbjct: 83 LLPILDETLRD---YPNIEIIHGDILRVDINRLIEEKMAGGPIKVVANLPYYVTTPIIAK 139
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
L+ + S +++QKE A R++ASPG ++ L+V VK E ++ V K F+P P
Sbjct: 140 LIEEDLNIESIIIMIQKEVAHRIVASPGSKQYGSLSVFVKFYTQPEILIPVPKTVFMPQP 199
Query: 175 KVDSSVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTL 212
KVDS+V+ + K ++P+++ + + + FSK+ KT+
Sbjct: 200 KVDSAVIRLNIKRDLPEIDREIFFQVVKAAFSKRRKTI 237
>gi|152973889|ref|YP_001373406.1| dimethyladenosine transferase [Bacillus cytotoxicus NVH 391-98]
gi|189028800|sp|A7GJV3.1|RSMA_BACCN RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|152022641|gb|ABS20411.1| dimethyladenosine transferase [Bacillus cytotoxicus NVH 391-98]
Length = 292
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 125/220 (56%), Gaps = 15/220 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + VL+ IV + I P +EIGPG G LT +L + +KKV A EID+R
Sbjct: 21 FKKSLGQNFLIDTNVLNRIVDYAEIGPKGGAIEIGPGIGALTEQLAKRAKKVVAFEIDQR 80
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEF-----PQFD-----LVVANIPYGISSPLVA 113
++ IL+ A +D + +I+KD LK QF+ +VVAN+PY +++P++
Sbjct: 81 LLPILDETLAP---YDNVTIINKDVLKANVHEVFQEQFEEGQDVMVVANLPYYVTTPILF 137
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
KL+ R +++QKE RL A PG ++ L++ ++ +VE VM V + F+P
Sbjct: 138 KLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKDYGSLSIAIQYYTEVETVMTVPRTVFVPQ 197
Query: 174 PKVDSSVV--IIRPKAEIPDVNLDEWRAFTRTCFSKKNKT 211
P VDSSV+ + RPK + ++ + R F+++ KT
Sbjct: 198 PNVDSSVIRLLKRPKPIVEVIDEKFFFEVVRASFAQRRKT 237
>gi|160903048|ref|YP_001568629.1| dimethyladenosine transferase [Petrotoga mobilis SJ95]
gi|160360692|gb|ABX32306.1| dimethyladenosine transferase [Petrotoga mobilis SJ95]
Length = 275
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 125/219 (57%), Gaps = 10/219 (4%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQ+ L+N V IV+KS I+ +D ++EIG G G LT ++ + +KKV EIDER+
Sbjct: 16 KGLGQNFLSNSTVSHEIVKKSEIDENDVIIEIGTGNGILTEEIAKKAKKVITFEIDERLK 75
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDLV-----VANIPYGISSPLVAKLVYGTK 120
+L R S + + +D L T+ +F + +ANIPY ISS ++ K+ +
Sbjct: 76 PLLEERFEGS---KNVEIHFEDFLNTDLSKFKDIPKLKYIANIPYYISSKILEKIFEESP 132
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
F A + QKEF +RL+A S ++ L++ V+ VE +MDVSK +F+P PKVDS +
Sbjct: 133 KFEYAIFMFQKEFGQRLMAKSKKS-YSPLSIFVQTYCTVERIMDVSKNNFIPIPKVDSVI 191
Query: 181 VIIRPKAE-IPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
+ P + + +++ ++ F CFSK+ KT+ K+
Sbjct: 192 LKFNPVYKYVEEIDPKDFMKFVHICFSKRRKTIKNNLKE 230
>gi|377831023|ref|ZP_09814011.1| dimethyladenosine transferase [Lactobacillus mucosae LM1]
gi|377555120|gb|EHT16811.1| dimethyladenosine transferase [Lactobacillus mucosae LM1]
Length = 281
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 129/230 (56%), Gaps = 17/230 (7%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I K GQ+ LT+ VL +IV+ ++I +D V+EIGPG G LT +L + + +V A+EID
Sbjct: 6 IHAKKGFGQNFLTDLNVLKNIVKAAAITKEDNVIEIGPGLGALTEQLAQAAGQVVALEID 65
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFP-----QFD------LVVANIPYGISSP 110
++ +L+ + +D + V+++D LK + P QF VVAN+PY I+SP
Sbjct: 66 TDLLPVLDEVLSP---YDNVKVLNQDVLKADLPALIQEQFADPGRPIKVVANLPYYITSP 122
Query: 111 LVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDF 170
++ L+ ++ + +++QKE A+RL A PG E+ L + ++ VS+ F
Sbjct: 123 ILMGLLESPVAWSAICVMMQKEVAQRLTAQPGTKEYGSLTLAIEYRMQARIAFGVSRHAF 182
Query: 171 LPCPKVDSSVVIIRPKAE-IPDVNLDEWR--AFTRTCFSKKNKTLGATFK 217
+P P VDS++V++ P+ + + DE + F + CF+ + K+L K
Sbjct: 183 VPAPNVDSAIVVLTPRTQPLAAKPYDEGKFFGFVKNCFAHRRKSLWNNLK 232
>gi|452207471|ref|YP_007487593.1| probable dimethyladenosine transferase [Natronomonas moolapensis
8.8.11]
gi|452083571|emb|CCQ36883.1| probable dimethyladenosine transferase [Natronomonas moolapensis
8.8.11]
Length = 273
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/208 (39%), Positives = 114/208 (54%), Gaps = 11/208 (5%)
Query: 10 QHILTNQRVLDSIVRKSSINPD--DT--VLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
QH L + RVLD R PD DT V+EIG GTG LT +LL V+ +V +E D +
Sbjct: 21 QHFLVDDRVLD---RLPGYLPDGADTSHVVEIGGGTGGLTDRLLSVADRVTVVERDPDLA 77
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSA 125
L A L V++ DAL+ + P F V+N+PYG+SS + +L+ + R
Sbjct: 78 AFLREEFAAEIAGGTLTVVAGDALEVDLPAFTASVSNLPYGVSSEIAFRLL---PAGRPL 134
Query: 126 TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP 185
L+ Q EFA R+ A+PG SE+ RL+V AD+E V V K F P P V+SSVV P
Sbjct: 135 VLMFQAEFAERMAAAPGSSEYGRLSVTAGHYADIEVVEAVPKEAFSPPPAVESSVVRATP 194
Query: 186 KAEIPDVNLDE-WRAFTRTCFSKKNKTL 212
+ DV DE + A R F+++ KT+
Sbjct: 195 RVPEYDVPDDESFMALVRAVFTQRRKTM 222
>gi|257388711|ref|YP_003178484.1| dimethyladenosine transferase [Halomicrobium mukohataei DSM 12286]
gi|257171018|gb|ACV48777.1| dimethyladenosine transferase [Halomicrobium mukohataei DSM 12286]
Length = 290
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 116/219 (52%), Gaps = 8/219 (3%)
Query: 10 QHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILN 69
QH L + RVLD I + VLE+G G G LT +LL V+ +V AIE D L
Sbjct: 34 QHFLIDDRVLDRIPGYADQMDRSHVLEVGAGPGALTDRLLAVADRVTAIERDPDFAAHLR 93
Query: 70 RRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLL 129
AD+ DRL ++ DAL + P+F V+N+PYG SS + +L+ K L+
Sbjct: 94 EEFADAIDADRLTIVEGDALDVDLPEFSASVSNLPYGASSEIAFRLLPRGKPL---VLMF 150
Query: 130 QKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKA-- 187
Q+EFA R+ A PG ++ RL+V ADVE V V F P P+VDS++V +RP+
Sbjct: 151 QQEFAERMAADPGSDDYGRLSVTAGHYADVEIVETVPPTAFDPQPRVDSAIVRLRPREPD 210
Query: 188 -EIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIEL 225
+PD + + F + F+++ KT+ + + +L
Sbjct: 211 YSVPDDDF--FMDFLKGVFTQRRKTMRNAVRNTAHITDL 247
>gi|186685005|ref|YP_001868201.1| dimethyladenosine transferase [Nostoc punctiforme PCC 73102]
gi|226732604|sp|B2J0A6.1|RSMA_NOSP7 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|186467457|gb|ACC83258.1| dimethyladenosine transferase [Nostoc punctiforme PCC 73102]
Length = 286
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/244 (36%), Positives = 130/244 (53%), Gaps = 30/244 (12%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDD------TVLEIGPGTGNLTLKLLEVSKKVHAIEIDE 62
QH L +++ LD+I++ + D +LEIGPGTG LT +LL + + + A+EID
Sbjct: 9 AQHWLKSEKALDAIIKAAECTESDRSPKGDCILEIGPGTGILTRRLLPLVQSLIAVEIDR 68
Query: 63 RMVEILNRRAADSGFHDRLNVISKDALKTEFPQF----------DLVVANIPYGISSPLV 112
+ ++L+++ G + ++ D L + P + + VVANIPY I+ P++
Sbjct: 69 DLCQLLSKQL---GKTENFLLLQGDFLTLDLPSYLVAFPNFQKPNKVVANIPYNITGPII 125
Query: 113 AKLVYGT------KSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVS 166
KL+ GT + F S LL+QKE A RL A PG F L+V V+ +A+ E + V
Sbjct: 126 EKLL-GTIANPNPEPFDSIVLLVQKEVAERLYAKPGSKTFGALSVRVQYLAECELICTVP 184
Query: 167 KRDFLPCPKVDSSVVIIRP-KAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIEL 225
F P PKVDS+VV +RP K EIP +N + F + F K K L + VIE
Sbjct: 185 ASAFHPAPKVDSAVVRLRPRKIEIPALNPRQLETFLKLGFGAKRKMLRNNL---QSVIER 241
Query: 226 LRLS 229
RLS
Sbjct: 242 DRLS 245
>gi|300864419|ref|ZP_07109290.1| dimethyladenosine transferase [Oscillatoria sp. PCC 6506]
gi|300337563|emb|CBN54438.1| dimethyladenosine transferase [Oscillatoria sp. PCC 6506]
Length = 281
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 126/238 (52%), Gaps = 23/238 (9%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
QH L +++ L+ IV+ + ++ D VLEIGPGTG LT LL ++ V A+EID + E L
Sbjct: 11 AQHWLKSEKALNQIVKAADLS-QDRVLEIGPGTGILTRSLLPAAQSVVAVEIDRDLCEKL 69
Query: 69 NRRAADSGFHDRLNVISKDALKTE-------FPQF---DLVVANIPYGISSPLVAKLVY- 117
A G D ++ D L + FP+F + VVANIPY I+ P++ KL+
Sbjct: 70 ---AKQLGKVDNFLLVQGDILAMDLEEQLAAFPKFQNPNKVVANIPYNITGPIIEKLLGK 126
Query: 118 ----GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
K F LL+QKE A RL A PG F L+V V+ +A+ E + DV + F P
Sbjct: 127 ISAPAAKPFDLIVLLVQKEVAERLYAKPGSRAFGALSVRVQYLAECELICDVPAKAFYPP 186
Query: 174 PKVDSSVVIIRPKAEIPD-VNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLSK 230
PKVDS+VV +RP+ P +N + + F K K L K IEL RL++
Sbjct: 187 PKVDSAVVRLRPRMVEPQAINPVHLESLIKLGFGSKRKMLRNNL---KGTIELERLAQ 241
>gi|443310298|ref|ZP_21039955.1| dimethyladenosine transferase [Synechocystis sp. PCC 7509]
gi|442779647|gb|ELR89883.1| dimethyladenosine transferase [Synechocystis sp. PCC 7509]
Length = 266
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 118/216 (54%), Gaps = 15/216 (6%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
QH L +++VL I++ + I D +LEIGPGTG LT +LL +++ V A+EID + +L
Sbjct: 9 AQHWLKSEKVLHQIIKAAEITKSDRILEIGPGTGVLTRQLLPLAQSVVAVEIDRDLCALL 68
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDL------VVANIPYGISSPLVAKLVY----- 117
++ G ++ D L P +D VVANIPY I+ P++ KL+
Sbjct: 69 VKQL---GKVSNFLLLQGDILSLALPDYDACKDLNKVVANIPYNITGPILEKLLGKISTP 125
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
+SF S LL+QKE A RL A PG+ F L+V V+ +A+ E V V + F P PKVD
Sbjct: 126 PVQSFDSIVLLVQKEVAERLYAKPGNRAFGALSVRVQYLAECELVCPVPAQCFSPPPKVD 185
Query: 178 SSVVIIRPKAEIPDV-NLDEWRAFTRTCFSKKNKTL 212
S+VV +RP+ +P N + F+ K K L
Sbjct: 186 SAVVRLRPRQILPAATNPRNLETLVKLGFATKRKML 221
>gi|194336270|ref|YP_002018064.1| dimethyladenosine transferase [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308747|gb|ACF43447.1| dimethyladenosine transferase [Pelodictyon phaeoclathratiforme
BU-1]
Length = 262
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 118/218 (54%), Gaps = 11/218 (5%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQ+ LT++ + IV S P D +LEIGPG G LT ++E +E D ++
Sbjct: 16 KKLGQNFLTDRNITRKIVIASGATPQDNILEIGPGFGALTRAIMEFCPLFTVVEKDHKLA 75
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDL-----VVANIPYGISSPLVAKLVYGTK 120
+ + + +LN+I D L+T+ ++ NIPY I++P++ KL+
Sbjct: 76 DFIRSE------YPQLNLIEGDFLETDLAALAHDKPLKILGNIPYSITTPILFKLLEHRH 129
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
+F SATL++Q E A R++A P ++ LAV ++ DV ++ V ++ F P P VDS+V
Sbjct: 130 TFFSATLMMQHEVAMRIVAHPSTKDYGILAVQMQAFCDVNYLFKVGRKVFRPQPGVDSAV 189
Query: 181 VIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
+ + PK +P + D +R F R F ++ KTL K+
Sbjct: 190 LQMTPKNNVPLNDADGFRRFVRIAFHQRRKTLLNNLKE 227
>gi|427414458|ref|ZP_18904648.1| dimethyladenosine transferase [Veillonella ratti ACS-216-V-Col6b]
gi|425714418|gb|EKU77423.1| dimethyladenosine transferase [Veillonella ratti ACS-216-V-Col6b]
Length = 286
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 122/223 (54%), Gaps = 10/223 (4%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I K GQ+ L ++ V+D IV+ + + P + VLEIGPG G LT L + V A+E+D
Sbjct: 21 IHMSKKLGQNFLISRHVVDDIVKAAQLVPGEPVLEIGPGIGTLTQGLAQSKADVTAVELD 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFD-----LVVANIPYGISSPLVAKLV 116
R++E+L+ A +D +N+I D LK P+ VVAN+PY I++P++ L+
Sbjct: 81 RRLLEVLDTTLAG---YDNVNIIHGDILKVNIPELMNHKPFKVVANLPYYITTPIIMSLL 137
Query: 117 YGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKV 176
+++QKE A R++A PG + L+V V+ + + V +VS + FLP P+V
Sbjct: 138 EMKLPIERLVVMVQKEVAERMVAEPGTKAYGALSVAVQYYTEPDIVFEVSPKSFLPPPEV 197
Query: 177 DSSVVIIRPKAEIPDVNLDEWRAF--TRTCFSKKNKTLGATFK 217
S+V+ R + + P DE F + F+++ KT T K
Sbjct: 198 TSAVIRCRLRKDPPVQVADEKLLFRVIKAAFAQRRKTFSNTMK 240
>gi|389571477|ref|ZP_10161572.1| dimethyladenosine transferase [Bacillus sp. M 2-6]
gi|388428877|gb|EIL86667.1| dimethyladenosine transferase [Bacillus sp. M 2-6]
Length = 292
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 126/222 (56%), Gaps = 17/222 (7%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + +LD IV + I + V+EIGPG G LT +L + +KKV A EID+R
Sbjct: 22 FKKSLGQNFLIDTNILDRIVDHAEITDETGVIEIGPGIGALTEQLAKRAKKVTAFEIDQR 81
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEF-----PQFD-----LVVANIPYGISSPLVA 113
++ ILN + +D + +I +D LK + QF +VVAN+PY +++P++
Sbjct: 82 LLPILNDTLSP---YDNVTIIHQDVLKADVRKVIEEQFADCKEVMVVANLPYYVTTPIIM 138
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
KL+ + ++LQKE A R+ A P E+N L++ V+ + + VM V K F+P
Sbjct: 139 KLLEENLPLKGIVVMLQKEVADRMAAVPSSKEYNSLSIAVQFYTEAKTVMVVPKTVFVPQ 198
Query: 174 PKVDSSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTL 212
P VDS+V+ + + E P V++D F R F ++ KTL
Sbjct: 199 PNVDSAVIKLTVR-ETPAVSVDNDTFFFQLIRASFGQRRKTL 239
>gi|329767929|ref|ZP_08259441.1| dimethyladenosine transferase [Gemella haemolysans M341]
gi|328838592|gb|EGF88195.1| dimethyladenosine transferase [Gemella haemolysans M341]
Length = 286
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 126/220 (57%), Gaps = 15/220 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + +L+ IV + +N + V+EIGPG G+LT L + +KKV + EID R
Sbjct: 19 FKKSLGQNFLIDANILNRIVDGAGVNENIGVIEIGPGIGSLTEALAKKAKKVISFEIDGR 78
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFD----------LVVANIPYGISSPLVA 113
++ IL+ AD + + +I+ D LK + + +VVAN+PY I++P++
Sbjct: 79 LLPILSETLAD---YSNVEIINNDILKVDVDKIIAEKMSDCEKIMVVANLPYYITTPILT 135
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ T+ +++QKE A RL A G ++N L + + DVE++ V K+ F+P
Sbjct: 136 HLIENTEKIDGYVVMMQKEVANRLNAKVGTKDYNSLTILLNYYTDVEYLFTVPKKVFVPA 195
Query: 174 PKVDSSVVIIRPKAEIPDVNLD-EWRAFTRTCFSKKNKTL 212
P V+S+VV I K E + D ++ F R+CF ++ KTL
Sbjct: 196 PNVESAVVKIMTK-ETREFETDAKFFKFVRSCFVQRRKTL 234
>gi|414078326|ref|YP_006997644.1| dimethyladenosine transferase [Anabaena sp. 90]
gi|413971742|gb|AFW95831.1| dimethyladenosine transferase [Anabaena sp. 90]
Length = 272
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 124/224 (55%), Gaps = 21/224 (9%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K QH L + + L+SIV+ ++ D VLEIGPGTG LT +LL + K + A+EID +
Sbjct: 6 KQFAQHWLKSDKALNSIVQAANCQETDKVLEIGPGTGILTRRLLPLVKSLLAVEIDRDLC 65
Query: 66 EILNRRAAD-------SGFHDRLNVISKDALKTEFPQF---DLVVANIPYGISSPLVAKL 115
++L ++ + G L+++S+ T FP F + VVANIPY I+ P++ KL
Sbjct: 66 KLLAKQLGEKENFLLLQGDFLTLDLLSQ---LTAFPNFQKQNKVVANIPYNITGPIIEKL 122
Query: 116 VYGTKS------FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRD 169
+ GT S F S LL+QKE A RL A PG F L+V V+ +AD E + V
Sbjct: 123 L-GTISHPNPEPFDSIVLLVQKEVAERLYAKPGSRTFGALSVRVQYLADCELICTVPAAA 181
Query: 170 FLPCPKVDSSVVIIRPKA-EIPDVNLDEWRAFTRTCFSKKNKTL 212
F+P PKVDS+VV + PK EIP + + + F K K L
Sbjct: 182 FVPPPKVDSAVVRLLPKQIEIPAHDPKKLETLIKLGFGSKRKML 225
>gi|300814328|ref|ZP_07094600.1| dimethyladenosine transferase [Peptoniphilus sp. oral taxon 836
str. F0141]
gi|300511595|gb|EFK38823.1| dimethyladenosine transferase [Peptoniphilus sp. oral taxon 836
str. F0141]
Length = 288
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 132/241 (54%), Gaps = 19/241 (7%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K+ GQ+ L + ++ IV + ++ D VLEIGPG G LT +L +KKV +IEID+R
Sbjct: 21 FSKTLGQNFLIDGNIVRKIVDSAEVSEADNVLEIGPGIGTLTEELALRAKKVVSIEIDKR 80
Query: 64 MVEILNRRAADSGFHDRLNVISKDALK--------TEFPQFDL-VVANIPYGISSPLVAK 114
+ ++L +D + +I KD LK EF + VVAN+PY I++P++ K
Sbjct: 81 LKDLLEETLP----YDNVKIIYKDFLKLDLKTLIDEEFKGQNFKVVANLPYYITTPIIEK 136
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
L+ +++ +++QKE A+R A P ++ L+V ++ + V + F+P P
Sbjct: 137 LLLNSENIEIINVMIQKEVAKRFTAQPQTKDYGSLSVFIQFFCKAFYEFTVPRTVFMPKP 196
Query: 175 KVDSSVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ------KKKVIELLRL 228
VDS V + K ++P+++ +E+ R FSK+ KTL + Q K KV E+L L
Sbjct: 197 NVDSGVCKLEVKRDLPNIDREEFFKIVRAAFSKRRKTLVNSLSQSQLNLDKNKVTEILEL 256
Query: 229 S 229
S
Sbjct: 257 S 257
>gi|398937173|ref|ZP_10667212.1| dimethyladenosine transferase [Pseudomonas sp. GM41(2012)]
gi|398167156|gb|EJM55236.1| dimethyladenosine transferase [Pseudomonas sp. GM41(2012)]
Length = 272
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 123/227 (54%), Gaps = 16/227 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ HK++ GQ+ L + V+D I+R P+D +LEIGPG G LT LL ++ +E
Sbjct: 5 YQHKARKRFGQNFLHDAGVIDRILRAIRAKPEDRLLEIGPGQGALTQGLLNSGAQLDVVE 64
Query: 60 IDERMVEILNRR-AADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLV 112
+D+ ++ ILN++ A+ S F ++ DALK +F P VV N+PY IS+PL+
Sbjct: 65 LDKDLIPILNQQFASKSNF----SLHQGDALKFDFTSLNAAPNSLRVVGNLPYNISTPLI 120
Query: 113 AKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
L++ R +LQKE RL A PG ++ RL++ V+ VE + +V F P
Sbjct: 121 FHLLHNASLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNP 180
Query: 173 CPKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P A +P D R F+++ KTL T K
Sbjct: 181 PPKVDSAIVRLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNTLK 227
>gi|448705920|ref|ZP_21700881.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein,
partial [Halobiforma nitratireducens JCM 10879]
gi|445795160|gb|EMA45694.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein,
partial [Halobiforma nitratireducens JCM 10879]
Length = 285
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 121/211 (57%), Gaps = 9/211 (4%)
Query: 8 KGQHILTNQRVLDSI-VRKSSINPDDT-VLEIGPGTGNLTLKLLEV---SKKVHAIEIDE 62
+ QH L + RVLD + I+ D T +LEIG GTG LT +LL + S +V +E D
Sbjct: 22 RDQHFLVDDRVLDRLPTYLEEIDADTTHLLEIGGGTGALTDRLLALAGESGEVTVVERDP 81
Query: 63 RMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSF 122
+ L D+ DRL VI DAL+ + P F V+N+PYG+SS + +L+ K
Sbjct: 82 DLAAFLREEFTDAIDADRLTVIEGDALEVDLPDFTASVSNLPYGVSSEITFRLLPEGKRL 141
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
L+ Q+EFA R++A PG SE+ RL+V+ + AD E V V K F P P V+S+VV
Sbjct: 142 ---VLMFQQEFAERMVAEPGTSEYGRLSVSTQHYADAELVETVPKEAFSPPPAVESAVVR 198
Query: 183 IRPKAEIPDVNLDE-WRAFTRTCFSKKNKTL 212
+RP+ DV+ +E + F + F+++ KT+
Sbjct: 199 LRPRDPEYDVDDEEFFLRFVKALFTQRRKTI 229
>gi|433624239|ref|YP_007257869.1| Ribosomal RNA small subunit methyltransferase A [Mycoplasma cynos
C142]
gi|429534265|emb|CCP23767.1| Ribosomal RNA small subunit methyltransferase A [Mycoplasma cynos
C142]
Length = 259
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 131/228 (57%), Gaps = 7/228 (3%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
IF K GQ+ L + ++ IV IN D V+EIGPG G LT +LL+ K + A EID
Sbjct: 5 IFAKKKYGQNFLHDNNIIKKIVSLVEIN-DLNVIEIGPGRGALTKELLKKVKFLTAYEID 63
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQF--DLVVANIPYGISSPLVAKLVYGT 119
MVEIL + + F +I+KD LK + + +++ANIPY I+S ++ K+
Sbjct: 64 VDMVEILKKEISSEKFE----LINKDFLKVDLSEIKPSIIIANIPYYITSDILFKIFEYR 119
Query: 120 KSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSS 179
+ ++A L++QKE A R++A SE+++L+V+ + +ADV+ V + F+P PKVDS+
Sbjct: 120 EKIKTAILMVQKEVAERIVALNNTSEYSKLSVSSQYLADVKVEFLVPSKCFIPKPKVDSA 179
Query: 180 VVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLR 227
++ + K I + ++ F + CFS + K L K K K+ +L+
Sbjct: 180 IISFKFKDNISNQEWKIYKDFFKLCFSNRRKKLSFALKMKYKMDVILK 227
>gi|282883264|ref|ZP_06291862.1| dimethyladenosine transferase [Peptoniphilus lacrimalis 315-B]
gi|281296894|gb|EFA89392.1| dimethyladenosine transferase [Peptoniphilus lacrimalis 315-B]
Length = 288
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 132/241 (54%), Gaps = 19/241 (7%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K+ GQ+ L + ++ IV + ++ D VLEIGPG G LT +L +KKV +IEID+R
Sbjct: 21 FSKTLGQNFLIDGNIVRKIVDSAEVSEADNVLEIGPGIGTLTEELALRAKKVVSIEIDKR 80
Query: 64 MVEILNRRAADSGFHDRLNVISKDALK--------TEFPQFDL-VVANIPYGISSPLVAK 114
+ ++L +D + +I KD LK EF + VVAN+PY I++P++ K
Sbjct: 81 LEDLLEETLP----YDNVKIIYKDFLKLDLKTLIDEEFKGQNFKVVANLPYYITTPIIEK 136
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
L+ +++ +++QKE A+R A P ++ L+V ++ + V + F+P P
Sbjct: 137 LLLNSENIEIINVMIQKEVAKRFTAQPQTKDYGSLSVFIQFFCRAFYEFTVPRTVFMPKP 196
Query: 175 KVDSSVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ------KKKVIELLRL 228
VDS V + K ++P+++ +E+ R FSK+ KTL + Q K KV E+L L
Sbjct: 197 NVDSGVCKLEVKRDLPNIDREEFFKIVRAAFSKRRKTLVNSLSQSQLNLDKNKVTEILEL 256
Query: 229 S 229
S
Sbjct: 257 S 257
>gi|406671663|ref|ZP_11078902.1| dimethyladenosine transferase [Facklamia hominis CCUG 36813]
gi|405580913|gb|EKB54972.1| dimethyladenosine transferase [Facklamia hominis CCUG 36813]
Length = 303
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 127/223 (56%), Gaps = 14/223 (6%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS GQ+ L ++L+ +V + I+ + TV+EIGPG G LT L +K+V A EID+R V
Sbjct: 29 KSLGQNFLIEPQILNKMVDLADIDKNCTVIEIGPGIGALTQFLAMRAKRVIAFEIDQRFV 88
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFD---------LVVANIPYGISSPLVAKLV 116
EIL+ D D + VI++D LK +F + +VVAN+PY I++P++ L+
Sbjct: 89 EILSETLVD---FDNVTVIAEDILKVDFSKEAYKGLLEEPLMVVANLPYYITTPIIMHLL 145
Query: 117 YGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKV 176
F+S +L+QKE A+R+ AS G +N L+V +++ ++ V + F+P PKV
Sbjct: 146 QSELPFQSLVMLMQKEVAQRMTASVGTKAYNSLSVAIQMQMASQYAFVVPRTVFIPQPKV 205
Query: 177 DSSVVIIR--PKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
DS+V+ + P+ + + + F + CF ++ KTL K
Sbjct: 206 DSAVLKLTRLPQKRVVVADDRLFERFVQQCFKQRRKTLWNNLK 248
>gi|387895972|ref|YP_006326269.1| dimethyladenosine transferase [Pseudomonas fluorescens A506]
gi|387162785|gb|AFJ57984.1| dimethyladenosine transferase [Pseudomonas fluorescens A506]
Length = 270
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 121/227 (53%), Gaps = 16/227 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ H+++ GQ+ L + V+D I+R P+D +LEIGPG G LT LL ++ +E
Sbjct: 5 YQHRARKRFGQNFLHDAGVIDRILRSIHAKPEDRLLEIGPGQGALTQGLLASGGQLDVVE 64
Query: 60 IDERMVEILNRR-AADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLV 112
+D+ ++ ILN++ A S F N+ DALK +F P VV N+PY IS+PL+
Sbjct: 65 LDKDLIPILNQQFAGKSNF----NLHQGDALKFDFNSLNAAPNSLRVVGNLPYNISTPLI 120
Query: 113 AKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
L+ R +LQKE RL A PG ++ RL++ V+ VE + +V F P
Sbjct: 121 FHLLNNAGIIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNP 180
Query: 173 CPKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P A +P D R F+++ KTL T K
Sbjct: 181 PPKVDSAIVRLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNTLK 227
>gi|302873237|ref|YP_003841870.1| dimethyladenosine transferase [Clostridium cellulovorans 743B]
gi|307688596|ref|ZP_07631042.1| dimethyladenosine transferase [Clostridium cellulovorans 743B]
gi|302576094|gb|ADL50106.1| dimethyladenosine transferase [Clostridium cellulovorans 743B]
Length = 282
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 125/224 (55%), Gaps = 15/224 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ LT+ VL+ IV + +N +D V+EIGPG G LT +LL +KKV AIE+D
Sbjct: 17 FTKSLGQNFLTDDSVLNDIVNGAEVNENDVVIEIGPGVGTLTKELLGKAKKVIAIEVDSS 76
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQF----DLV--VANIPYGISSPLVAKLVY 117
++ IL + D +I KDA K +F + D V VAN+PY +++P++ L+
Sbjct: 77 LIPILQEELKE---FDNFTLIHKDATKVDFNELIEGEDTVKIVANLPYYVTTPIITDLLN 133
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
+F S T+++QKE A R+ A+P E+ L + V+ D + V V F+P PKVD
Sbjct: 134 KKYNFTSITVMIQKEVADRINANPSSKEYGALTLLVQYYCDTKIVRVVPPSCFIPQPKVD 193
Query: 178 SSVV----IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
S+V+ + P+A + D L + R F+ + KTL K
Sbjct: 194 STVIRLDKLPAPRAVVEDEEL--FFRIIRDSFNMRRKTLWNGMK 235
>gi|221234694|ref|YP_002517130.1| dimethyladenosine transferase [Caulobacter crescentus NA1000]
gi|220963866|gb|ACL95222.1| dimethyladenosine transferase [Caulobacter crescentus NA1000]
Length = 281
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 116/221 (52%), Gaps = 7/221 (3%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ KS GQH L + V I R + + DTV+E+GPG G LT LLE +V AIE D
Sbjct: 23 LMARKSFGQHFLLDLNVTRKIARLAQVGEGDTVVEVGPGPGGLTRALLETGARVVAIEKD 82
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFD----LVVANIPYGISSPLVAKLVY 117
R + +L A + RL ++ DALK + Q VV+N+PY + + L+ +
Sbjct: 83 SRFLPLLAEVAEVA--EGRLELVEGDALKVDAAQAAGGPAHVVSNLPYNVGTQLLINWLT 140
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
G S TL+ QKE A R++A PGD + RLAV + + + VMD+ + F P PKV
Sbjct: 141 GPFRPLSMTLMFQKEVADRIVAQPGDDAYGRLAVIAQTLCEARTVMDLPAKAFTPPPKVA 200
Query: 178 SSVVIIRPKAEIPDVN-LDEWRAFTRTCFSKKNKTLGATFK 217
S+VV + PKAE P + T F ++ K L ++ K
Sbjct: 201 SAVVRLVPKAEPPPAEVVAALERVTAAAFGQRRKMLRSSLK 241
>gi|440737963|ref|ZP_20917513.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas fluorescens BRIP34879]
gi|440381538|gb|ELQ18065.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas fluorescens BRIP34879]
Length = 270
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 80/227 (35%), Positives = 122/227 (53%), Gaps = 16/227 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ H+++ GQ+ L + V+D I+R P+D +LEIGPG G LT LL ++ +E
Sbjct: 5 YQHRARKRFGQNFLHDAGVIDRILRSIHAKPEDRLLEIGPGQGALTQGLLASGGQLDVVE 64
Query: 60 IDERMVEILNRR-AADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLV 112
+D+ ++ ILN++ A ++ F N+ DALK +F P VV N+PY IS+PL+
Sbjct: 65 LDKDLIPILNQQFAGNTNF----NLHQGDALKFDFNSLNAAPNSLRVVGNLPYNISTPLI 120
Query: 113 AKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
L+ R +LQKE RL A PG ++ RL++ V+ VE + +V F P
Sbjct: 121 FHLLNNASIIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNP 180
Query: 173 CPKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P A +P D R F+++ KTL T K
Sbjct: 181 PPKVDSAIVRLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNTLK 227
>gi|398959140|ref|ZP_10677956.1| dimethyladenosine transferase [Pseudomonas sp. GM33]
gi|398145515|gb|EJM34296.1| dimethyladenosine transferase [Pseudomonas sp. GM33]
Length = 272
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 80/227 (35%), Positives = 122/227 (53%), Gaps = 16/227 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ HK++ GQ+ L + V+D I+R +D +LEIGPG G LT LL ++ +E
Sbjct: 5 YQHKARKRFGQNFLHDAGVIDRILRSIHAKAEDRLLEIGPGQGALTQGLLSSGAQLDVVE 64
Query: 60 IDERMVEILNRR-AADSGFHDRLNVISKDALKTEFPQFDL------VVANIPYGISSPLV 112
+D+ ++ ILN++ A S F N+ DALK +F + VV N+PY IS+PL+
Sbjct: 65 LDKDLIPILNQQFAGKSNF----NLHQGDALKFDFNSLNAAPGSLRVVGNLPYNISTPLI 120
Query: 113 AKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
L++ + R +LQKE RL A PG ++ RL++ V+ VE + +V F P
Sbjct: 121 FHLLHNSHLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNP 180
Query: 173 CPKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P A +P D R F+++ KTL T K
Sbjct: 181 PPKVDSAIVRLVPHAVLPHPAKDHRLLERVVREAFNQRRKTLRNTLK 227
>gi|398908996|ref|ZP_10654330.1| dimethyladenosine transferase [Pseudomonas sp. GM49]
gi|398188935|gb|EJM76223.1| dimethyladenosine transferase [Pseudomonas sp. GM49]
Length = 272
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 80/227 (35%), Positives = 122/227 (53%), Gaps = 16/227 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ HK++ GQ+ L + V+D I+R +D +LEIGPG G LT LL ++ +E
Sbjct: 5 YQHKARKRFGQNFLHDAGVIDRILRSIHAKAEDRLLEIGPGQGALTQGLLSSGAQLDVVE 64
Query: 60 IDERMVEILNRR-AADSGFHDRLNVISKDALKTEFPQFDL------VVANIPYGISSPLV 112
+D+ ++ ILN++ A S F N+ DALK +F + VV N+PY IS+PL+
Sbjct: 65 LDKDLIPILNQQFAGKSNF----NLHQGDALKFDFNSLNATPGSLRVVGNLPYNISTPLI 120
Query: 113 AKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
L++ + R +LQKE RL A PG ++ RL++ V+ VE + +V F P
Sbjct: 121 FHLLHNSHLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNP 180
Query: 173 CPKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P A +P D R F+++ KTL T K
Sbjct: 181 PPKVDSAIVRLVPHAVLPHPAKDHRLLERVVREAFNQRRKTLRNTLK 227
>gi|398981221|ref|ZP_10689405.1| dimethyladenosine transferase [Pseudomonas sp. GM25]
gi|398133939|gb|EJM23120.1| dimethyladenosine transferase [Pseudomonas sp. GM25]
Length = 272
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 121/228 (53%), Gaps = 16/228 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ HK++ GQ+ L + V+D I+R S D +LEIGPG G LT +L ++ +E
Sbjct: 5 YQHKARKRFGQNFLHDAGVIDRILRSISAKAGDRMLEIGPGQGALTAGILNSGAQLDVVE 64
Query: 60 IDERMVEILNRR-AADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLV 112
+D+ ++ ILN++ A S F N+ DALK +F P VV N+PY IS+PL+
Sbjct: 65 LDKDLIPILNQQFAGKSNF----NLHQGDALKFDFNSLNAAPNSLRVVGNLPYNISTPLI 120
Query: 113 AKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
L+ R +LQKE RL A PG ++ RL++ V+ VE + +V F P
Sbjct: 121 FHLLNNAGIIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNP 180
Query: 173 CPKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFKQ 218
PKVDS++V + P A +P D R F+++ KTL T KQ
Sbjct: 181 PPKVDSAIVRLVPHAVLPHPAKDHRLLERVVREAFNQRRKTLRNTLKQ 228
>gi|398866845|ref|ZP_10622319.1| dimethyladenosine transferase [Pseudomonas sp. GM78]
gi|398238858|gb|EJN24579.1| dimethyladenosine transferase [Pseudomonas sp. GM78]
Length = 272
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 80/227 (35%), Positives = 121/227 (53%), Gaps = 16/227 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ HK++ GQ+ L + V+D I+R +D +LEIGPG G LT LL ++ +E
Sbjct: 5 YQHKARKRFGQNFLHDAGVIDRILRSIHAKAEDRLLEIGPGQGALTQGLLSSGAQLDVVE 64
Query: 60 IDERMVEILNRR-AADSGFHDRLNVISKDALKTEFPQFDL------VVANIPYGISSPLV 112
+D+ ++ ILN++ A S F N+ DALK +F + VV N+PY IS+PL+
Sbjct: 65 LDKDLIPILNQQFAGKSNF----NLHQGDALKFDFTSLNAAPGSLRVVGNLPYNISTPLI 120
Query: 113 AKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
L++ R +LQKE RL A PG ++ RL++ V+ VE + +V F P
Sbjct: 121 FHLLHNAHLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNP 180
Query: 173 CPKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P A +P D R F+++ KTL T K
Sbjct: 181 PPKVDSAIVRLVPHAVLPHPAKDHRLLERVVREAFNQRRKTLRNTLK 227
>gi|398890189|ref|ZP_10643876.1| dimethyladenosine transferase [Pseudomonas sp. GM55]
gi|398188492|gb|EJM75794.1| dimethyladenosine transferase [Pseudomonas sp. GM55]
Length = 272
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 80/227 (35%), Positives = 122/227 (53%), Gaps = 16/227 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ HK++ GQ+ L + V+D I+R +D +LEIGPG G LT LL ++ +E
Sbjct: 5 YQHKARKRFGQNFLHDAGVIDRILRSIHAKAEDRLLEIGPGQGALTQGLLSSGAQLDVVE 64
Query: 60 IDERMVEILNRR-AADSGFHDRLNVISKDALKTEFPQFDL------VVANIPYGISSPLV 112
+D+ ++ ILN++ A S F N+ DALK +F + VV N+PY IS+PL+
Sbjct: 65 LDKDLIPILNQQFAGKSNF----NLHQGDALKFDFNSLNAAPGSLRVVGNLPYNISTPLI 120
Query: 113 AKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
L++ + R +LQKE RL A PG ++ RL++ V+ VE + +V F P
Sbjct: 121 FHLLHNSHLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNP 180
Query: 173 CPKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P A +P D R F+++ KTL T K
Sbjct: 181 PPKVDSAIVRLVPHAVLPHPAKDHRLLERVVREAFNQRRKTLRNTLK 227
>gi|148270487|ref|YP_001244947.1| dimethyladenosine transferase [Thermotoga petrophila RKU-1]
gi|166221712|sp|A5IME8.1|RSMA_THEP1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|147736031|gb|ABQ47371.1| dimethyladenosine transferase [Thermotoga petrophila RKU-1]
Length = 260
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 132/227 (58%), Gaps = 8/227 (3%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQ L++ R+ IV++ + P+D V+EIG G G LT +L + +V A EIDE +
Sbjct: 16 KHLGQVFLSDDRIAKRIVKEVGLTPEDVVVEIGAGAGTLTEELAKTGARVIAYEIDESLA 75
Query: 66 EILNRRAADSGFHDRLNVISKDALKT-EFPQFDLVVANIPYGISSPLVAKLVYGTKSFRS 124
+L R + + + + +D LK + P+ + V+NIPY I+ P++ K++ F+
Sbjct: 76 PVLRERLSK---YPNVELRFEDFLKAKDIPEGAICVSNIPYSITGPIMEKII--EWKFKR 130
Query: 125 ATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIR 184
A +++QKE R+LA PG + L+V V+ +V+ + DVS+ F+P P+VDS+VV +R
Sbjct: 131 AIVMVQKEVGERILAKPGKKTYGYLSVVVQTFYEVKKLFDVSRSCFVPNPEVDSTVVDLR 190
Query: 185 PKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLSKQ 231
K+ D++ +++R F F+KK KTL + V E + LS++
Sbjct: 191 RKS--VDLDFEKFRKFVSMIFAKKRKTLKNNLRPFLSVFEGVDLSRR 235
>gi|423699688|ref|ZP_17674178.1| dimethyladenosine transferase [Pseudomonas fluorescens Q8r1-96]
gi|387996837|gb|EIK58167.1| dimethyladenosine transferase [Pseudomonas fluorescens Q8r1-96]
Length = 272
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 122/227 (53%), Gaps = 16/227 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ H+++ GQ+ L + V+D I+R PDD +LEIGPG G LT LL+ ++ +E
Sbjct: 5 YQHRARKRFGQNFLHDAGVIDRILRSIRAKPDDRLLEIGPGQGALTEGLLDSGAQLDVVE 64
Query: 60 IDERMVEILNRR-AADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLV 112
+D+ +V ILN++ A S F ++ DALK +F P VV N+PY IS+PL+
Sbjct: 65 LDKDLVPILNQQFAGRSNF----SLHQGDALKFDFNSLNAAPNSLRVVGNLPYNISTPLI 120
Query: 113 AKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
L+ R +LQKE RL A PG ++ RL++ V+ VE + +V F P
Sbjct: 121 FHLLSNAGLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNP 180
Query: 173 CPKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P A +P D R F+++ KTL T K
Sbjct: 181 PPKVDSAIVRLVPHAVLPHPAKDHRLLERVVREAFNQRRKTLRNTLK 227
>gi|330812131|ref|YP_004356593.1| dimethyladenosine transferase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327380239|gb|AEA71589.1| putative dimethyladenosine transferase [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 272
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 122/227 (53%), Gaps = 16/227 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ H+++ GQ+ L + V+D I+R PDD +LEIGPG G LT LL+ ++ +E
Sbjct: 5 YQHRARKRFGQNFLHDAGVIDRILRSIRAKPDDRLLEIGPGQGALTEGLLDSGAQLDVVE 64
Query: 60 IDERMVEILNRR-AADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLV 112
+D+ +V ILN++ A S F ++ DALK +F P VV N+PY IS+PL+
Sbjct: 65 LDKDLVPILNQQFAGRSNF----SLHQGDALKFDFNSLNAAPNSLRVVGNLPYNISTPLI 120
Query: 113 AKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
L+ R +LQKE RL A PG ++ RL++ V+ VE + +V F P
Sbjct: 121 FHLLSNAGLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNP 180
Query: 173 CPKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P A +P D R F+++ KTL T K
Sbjct: 181 PPKVDSAIVRLVPHAVLPHPAKDHRMLERVVREAFNQRRKTLRNTLK 227
>gi|398924284|ref|ZP_10661101.1| dimethyladenosine transferase [Pseudomonas sp. GM48]
gi|398173615|gb|EJM61445.1| dimethyladenosine transferase [Pseudomonas sp. GM48]
Length = 272
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/227 (35%), Positives = 122/227 (53%), Gaps = 16/227 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ HK++ GQ+ L + V+D I+R +D +LEIGPG G LT LL ++ +E
Sbjct: 5 YQHKARKRFGQNFLHDAGVIDRILRSIHAKTEDRLLEIGPGQGALTQGLLSSGAQLDVVE 64
Query: 60 IDERMVEILNRR-AADSGFHDRLNVISKDALKTEFPQFDL------VVANIPYGISSPLV 112
+D+ ++ ILN++ A S F N+ DALK +F + VV N+PY IS+PL+
Sbjct: 65 LDKDLIPILNQQFAGKSNF----NLHQGDALKFDFNSLNAAPGSLRVVGNLPYNISTPLI 120
Query: 113 AKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
L++ + R +LQKE RL A PG ++ RL++ V+ VE + +V F P
Sbjct: 121 FHLLHNSHLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNP 180
Query: 173 CPKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P A +P D R F+++ KTL T K
Sbjct: 181 PPKVDSAIVRLVPHAVLPHPAKDHRLLERVVREAFNQRRKTLRNTLK 227
>gi|189346402|ref|YP_001942931.1| dimethyladenosine transferase [Chlorobium limicola DSM 245]
gi|226729767|sp|B3EIC2.1|RSMA_CHLL2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|189340549|gb|ACD89952.1| dimethyladenosine transferase [Chlorobium limicola DSM 245]
Length = 263
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 117/218 (53%), Gaps = 11/218 (5%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQ+ LT++ + IVR S P++ +LEIGPG G LT +++EV +E D ++
Sbjct: 15 KQLGQNFLTDRNITRKIVRLSGAKPEENILEIGPGFGALTKEIIEVCPSFTVVEKDPKLA 74
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFD-----LVVANIPYGISSPLVAKLVYGTK 120
+ + +LNVI D LK + ++ NIPY I+SP++ +L+ +
Sbjct: 75 AFIRTE------YPQLNVIEADFLKIDLEAVTGARKLRILGNIPYSITSPILFRLLEYRR 128
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
F ATL++Q E A R++A P E+ LAV ++ DV + V ++ F P P VDS+V
Sbjct: 129 CFMHATLMMQHEVAMRIVAVPSTKEYGILAVQLQAFFDVSYGFRVGRKVFKPQPGVDSAV 188
Query: 181 VIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
+ I PK +P + + + F R F ++ KTL K+
Sbjct: 189 ITITPKEHVPLSDPEGFSRFVRCAFHQRRKTLLNNLKE 226
>gi|312963419|ref|ZP_07777901.1| dimethyladenosine transferase [Pseudomonas fluorescens WH6]
gi|311282225|gb|EFQ60824.1| dimethyladenosine transferase [Pseudomonas fluorescens WH6]
Length = 270
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 121/227 (53%), Gaps = 16/227 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ H+++ GQ+ L + V+D I+R P+D +LEIGPG G LT LL ++ +E
Sbjct: 5 YQHRARKRFGQNFLHDAGVIDRILRSIHAKPEDRLLEIGPGQGALTQGLLASGGQLDVVE 64
Query: 60 IDERMVEILNRR-AADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLV 112
+D+ ++ ILN++ A S F N+ DALK +F P VV N+PY IS+PL+
Sbjct: 65 LDKDLIPILNQQFAGKSNF----NLHQGDALKFDFNTLNAAPNSLRVVGNLPYNISTPLI 120
Query: 113 AKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
L+ R +LQKE RL A PG ++ RL++ V+ VE + +V F P
Sbjct: 121 FHLLNNAGIIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNP 180
Query: 173 CPKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P A +P D R F+++ KTL T K
Sbjct: 181 PPKVDSAIVRLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNTLK 227
>gi|16125931|ref|NP_420495.1| dimethyladenosine transferase [Caulobacter crescentus CB15]
gi|27151598|sp|Q9A7N5.1|RSMA_CAUCR RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|13423097|gb|AAK23663.1| dimethyladenosine transferase [Caulobacter crescentus CB15]
Length = 258
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 115/218 (52%), Gaps = 7/218 (3%)
Query: 5 HKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERM 64
KS GQH L + V I R + + DTV+E+GPG G LT LLE +V AIE D R
Sbjct: 3 RKSFGQHFLLDLNVTRKIARLAQVGEGDTVVEVGPGPGGLTRALLETGARVVAIEKDSRF 62
Query: 65 VEILNRRAADSGFHDRLNVISKDALKTEFPQFDL----VVANIPYGISSPLVAKLVYGTK 120
+ +L A + RL ++ DALK + Q VV+N+PY + + L+ + G
Sbjct: 63 LPLLAEVAEVA--EGRLELVEGDALKVDAAQAAGGPAHVVSNLPYNVGTQLLINWLTGPF 120
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
S TL+ QKE A R++A PGD + RLAV + + + VMD+ + F P PKV S+V
Sbjct: 121 RPLSMTLMFQKEVADRIVAQPGDDAYGRLAVIAQTLCEARTVMDLPAKAFTPPPKVASAV 180
Query: 181 VIIRPKAEIPDVN-LDEWRAFTRTCFSKKNKTLGATFK 217
V + PKAE P + T F ++ K L ++ K
Sbjct: 181 VRLVPKAEPPPAEVVAALERVTAAAFGQRRKMLRSSLK 218
>gi|378953236|ref|YP_005210724.1| protein KsgA [Pseudomonas fluorescens F113]
gi|359763250|gb|AEV65329.1| KsgA [Pseudomonas fluorescens F113]
Length = 272
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 122/227 (53%), Gaps = 16/227 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ H+++ GQ+ L + V+D I+R PDD +LEIGPG G LT LL+ ++ +E
Sbjct: 5 YQHRARKRFGQNFLHDAGVIDRILRSIRAKPDDRLLEIGPGQGALTEGLLDSGAQLDVVE 64
Query: 60 IDERMVEILNRR-AADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLV 112
+D+ +V ILN++ A S F ++ DALK +F P VV N+PY IS+PL+
Sbjct: 65 LDKDLVPILNQQFAGRSNF----SLHQGDALKFDFNSLNAAPNSLRVVGNLPYNISTPLI 120
Query: 113 AKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
L+ R +LQKE RL A PG ++ RL++ V+ VE + +V F P
Sbjct: 121 FHLLSNAGLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNP 180
Query: 173 CPKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P A +P D R F+++ KTL T K
Sbjct: 181 PPKVDSAIVRLVPHAVLPHPAKDHRLLERVVREAFNQRRKTLRNTLK 227
>gi|347524947|ref|YP_004831695.1| Dimethyladenosine transferase [Lactobacillus ruminis ATCC 27782]
gi|345283906|gb|AEN77759.1| Dimethyladenosine transferase [Lactobacillus ruminis ATCC 27782]
Length = 296
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 126/221 (57%), Gaps = 15/221 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ LT+ +L IV + + +D V+EIGPG G LT +L + + +V A+EID R
Sbjct: 25 FKKSLGQNFLTDLNILKKIVAAAEVGEEDDVIEIGPGIGALTEQLAKSAHQVMALEIDSR 84
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQ-----FD-----LVVANIPYGISSPLVA 113
++ +L+ + +D + ++ +D LK + + FD +VAN+PY I++P+V
Sbjct: 85 LIPVLSETLSP---YDNVKIVEQDVLKADLKELIAQNFDGRHKIKLVANLPYYITTPIVM 141
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ F + +++QKE A RL A PG ++ L+V V+ D + V K F+P
Sbjct: 142 HLLEVDVDFETIVVMMQKEVADRLAAQPGTKDYGSLSVAVQYEMDAKIAFIVPKTVFMPQ 201
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTL 212
PKVDS+++ + K E P+V +DE ++ + F + K+L
Sbjct: 202 PKVDSAIIALNRKDEKPNVPVDEPFFKKMVKGIFLHRRKSL 242
>gi|217076587|ref|YP_002334303.1| dimethyladenosine transferase [Thermosipho africanus TCF52B]
gi|217036440|gb|ACJ74962.1| dimethyladenosine transferase [Thermosipho africanus TCF52B]
Length = 261
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 122/216 (56%), Gaps = 21/216 (9%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS GQ+ LTN + IV +++ +TVLEIGPG G +T L++ V A+EID+R+
Sbjct: 16 KSLGQNFLTNLEIAKKIVESANVQTGETVLEIGPGAGTITEFLIKKGANVVAVEIDKRLT 75
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDL--------VVANIPYGISSPLVAKLVY 117
IL+R F + +D LK FD+ VV+NIPY I+ ++ K+++
Sbjct: 76 PILDRFNEFENFK----IYYQDFLK-----FDMKLLGENFKVVSNIPYSITGMIIKKILF 126
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
F +A L++QKE RLLA PG+ + L V V+ D+E V+ VSK +F+P P+VD
Sbjct: 127 S--KFSTAVLMVQKEVGDRLLAKPGEDR-SFLTVVVQTFTDIEKVLHVSKGNFVPPPQVD 183
Query: 178 SSVVIIRPKAEIPD-VNLDEWRAFTRTCFSKKNKTL 212
S V+ K I + N++E+ F CF KK KTL
Sbjct: 184 SVVLKFTRKENIYEKYNIEEFWTFVSKCFEKKRKTL 219
>gi|110598757|ref|ZP_01387018.1| dimethyladenosine transferase [Chlorobium ferrooxidans DSM 13031]
gi|110339621|gb|EAT58135.1| dimethyladenosine transferase [Chlorobium ferrooxidans DSM 13031]
Length = 261
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 119/218 (54%), Gaps = 11/218 (5%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQ+ LT++ + IV S DD +LEIGPG G LT +++ + +E D ++
Sbjct: 15 KKLGQNFLTDRNITRKIVASSGATADDNILEIGPGFGALTREIIAICPTFTVVEKDPKLA 74
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFD-----LVVANIPYGISSPLVAKLVYGTK 120
+ R+ G L V+ D L T+ V+ NIPY I+SP++ KL+ +
Sbjct: 75 AFI--RSEYPG----LKVLEADFLDTDLELLAGEKPLRVLGNIPYSITSPILFKLLEHRR 128
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
SF SATL++Q E A R++A P ++ LAV ++ DV ++ V ++ F P P VDS+V
Sbjct: 129 SFISATLMMQHEVAMRIVARPSTKDYGILAVQMQAFCDVSYLFKVGRKVFRPQPGVDSAV 188
Query: 181 VIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
+ ++PK E P + +R F RT F ++ KTL K+
Sbjct: 189 ISMKPKQESPVEESEGFRRFVRTAFHQRRKTLLNNLKE 226
>gi|447918645|ref|YP_007399213.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas poae RE*1-1-14]
gi|445202508|gb|AGE27717.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas poae RE*1-1-14]
Length = 270
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 119/226 (52%), Gaps = 14/226 (6%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ H+++ GQ+ L + V+D I+R P+D +LEIGPG G LT LL ++ +E
Sbjct: 5 YQHRARKRFGQNFLHDAGVIDRILRSIHAKPEDRLLEIGPGQGALTQGLLASGGQLDVVE 64
Query: 60 IDERMVEILNRRAADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLVA 113
+D+ ++ ILN++ A N+ DALK +F P VV N+PY IS+PL+
Sbjct: 65 LDKDLIPILNQQFAGKA---NFNLHQGDALKFDFNSLNAAPNSLRVVGNLPYNISTPLIF 121
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ R +LQKE RL A PG ++ RL++ V+ VE + +V F P
Sbjct: 122 HLLNNASIIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPP 181
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P A +P D R F+++ KTL T K
Sbjct: 182 PKVDSAIVRLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNTLK 227
>gi|423439778|ref|ZP_17416684.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG4X2-1]
gi|423450061|ref|ZP_17426940.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG5O-1]
gi|423462850|ref|ZP_17439618.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG6O-1]
gi|423532206|ref|ZP_17508624.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HuB2-9]
gi|423542523|ref|ZP_17518913.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HuB4-10]
gi|401127068|gb|EJQ34798.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG5O-1]
gi|401168319|gb|EJQ75584.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HuB4-10]
gi|402421821|gb|EJV54068.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG4X2-1]
gi|402422978|gb|EJV55199.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG6O-1]
gi|402465284|gb|EJV96966.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HuB2-9]
Length = 292
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 124/220 (56%), Gaps = 15/220 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + VL+ IV + I + +EIGPG G LT +L + +KKV A EID+R
Sbjct: 21 FKKSLGQNFLIDTNVLNRIVDHAEIGSESGAIEIGPGIGALTEQLAKRAKKVVAFEIDQR 80
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEF-----PQFD-----LVVANIPYGISSPLVA 113
++ IL+ A + + VI+KD LK + QF+ +VVAN+PY I++P++
Sbjct: 81 LLPILDETLAP---YSNVTVINKDVLKADVHEVFSEQFEEGQDVMVVANLPYYITTPILF 137
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
KL+ R +++QKE RL A PG E+ L++ ++ +VE VM V + F+P
Sbjct: 138 KLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVFVPQ 197
Query: 174 PKVDSSVV--IIRPKAEIPDVNLDEWRAFTRTCFSKKNKT 211
P VDS+++ + RPK + N + R F+++ KT
Sbjct: 198 PNVDSAIIRLLKRPKPVVEVTNETFFFEVVRASFAQRRKT 237
>gi|70732937|ref|YP_262708.1| dimethyladenosine transferase [Pseudomonas protegens Pf-5]
gi|118600886|sp|Q4K4X5.1|RSMA_PSEF5 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|68347236|gb|AAY94842.1| dimethyladenosine transferase [Pseudomonas protegens Pf-5]
Length = 270
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 121/227 (53%), Gaps = 16/227 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ H+++ GQ+ L + V+D I+R P+D +LEIGPG G LT LL ++ +E
Sbjct: 5 YQHRARKRFGQNFLHDAGVIDRILRSIHAKPEDRMLEIGPGQGALTEGLLGSGAQLDVVE 64
Query: 60 IDERMVEILNRR-AADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLV 112
+D+ ++ ILN++ A S F N+ DALK +F P VV N+PY IS+PL+
Sbjct: 65 LDKDLIPILNQQFAGKSNF----NLHQGDALKFDFNTLGAAPGSLRVVGNLPYNISTPLI 120
Query: 113 AKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
L+ R +LQKE RL A PG ++ RL++ V+ VE + +V F P
Sbjct: 121 FHLLQNAGLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNP 180
Query: 173 CPKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P A +P D R F+++ KTL T K
Sbjct: 181 PPKVDSAIVRLVPHAVLPHPAKDHRLLERIVREAFNQRRKTLRNTLK 227
>gi|423376684|ref|ZP_17353968.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG1O-2]
gi|423548754|ref|ZP_17525112.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HuB5-5]
gi|423621439|ref|ZP_17597217.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD148]
gi|401174285|gb|EJQ81496.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HuB5-5]
gi|401263468|gb|EJR69593.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD148]
gi|401641323|gb|EJS59043.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG1O-2]
Length = 292
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 124/220 (56%), Gaps = 15/220 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + VL+ IV + I + +EIGPG G LT +L + +KKV A EID+R
Sbjct: 21 FKKSLGQNFLIDTNVLNRIVDHAEIGSESGAIEIGPGIGALTEQLAKRAKKVVAFEIDQR 80
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEF-----PQFD-----LVVANIPYGISSPLVA 113
++ IL+ A + + VI+KD LK + QF+ +VVAN+PY I++P++
Sbjct: 81 LLPILDETLAP---YSNVTVINKDVLKADVHEVFSEQFEEGQDVMVVANLPYYITTPILF 137
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
KL+ R +++QKE RL A PG E+ L++ ++ +VE VM V + F+P
Sbjct: 138 KLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVFVPQ 197
Query: 174 PKVDSSVV--IIRPKAEIPDVNLDEWRAFTRTCFSKKNKT 211
P VDS+++ + RPK + N + R F+++ KT
Sbjct: 198 PNVDSAIIRLLKRPKPVVEVTNETFFFEVVRASFAQRRKT 237
>gi|76802475|ref|YP_327483.1| dimethyladenosine transferase [Natronomonas pharaonis DSM 2160]
gi|119365037|sp|Q3IPM0.1|RSMA_NATPD RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|76558340|emb|CAI49930.1| probable dimethyladenosine transferase [Natronomonas pharaonis DSM
2160]
Length = 274
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/212 (39%), Positives = 112/212 (52%), Gaps = 15/212 (7%)
Query: 8 KGQHILTNQRVLDSIVRKSSINPD----DTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
+ QH L + RVLD R PD D VLEIG GTG LT +LL+V+ +V IE D
Sbjct: 19 RDQHFLIDDRVLD---RLPGYLPDSADTDHVLEIGGGTGALTDRLLDVADRVTVIERDPG 75
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
+ L AD L VI DAL+ P F V+N+PYG+SS + +L+ R
Sbjct: 76 LATFLTDEFADEIEAGSLTVIEGDALEVPLPDFTASVSNLPYGVSSEIAFRLL---PEKR 132
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
L+ Q+EFA R+ A PG E+ RL+V ADVE V V K F P P V+S+VV
Sbjct: 133 PLVLMFQQEFAERMAAEPGTDEYGRLSVTAGHYADVEVVEPVPKEAFSPPPAVESAVVRT 192
Query: 184 RPKA---EIPDVNLDEWRAFTRTCFSKKNKTL 212
P+ E+PD L + R F+++ KT+
Sbjct: 193 TPREPPYEVPDDEL--FMRLVRAVFTQRRKTM 222
>gi|317495931|ref|ZP_07954294.1| dimethyladenosine transferase [Gemella morbillorum M424]
gi|316914108|gb|EFV35591.1| dimethyladenosine transferase [Gemella morbillorum M424]
Length = 286
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 126/220 (57%), Gaps = 15/220 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + +L+ I+ + IN V+EIGPG G+LT + + +KKV + EID R
Sbjct: 19 FKKSLGQNFLIDANILNRIIDGAGINETVGVIEIGPGIGSLTEAIAKKAKKVISFEIDGR 78
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFD----------LVVANIPYGISSPLVA 113
++ IL+ AD ++ + +I+ D LK + +VVAN+PY I++P++
Sbjct: 79 LLPILSETLAD---YNNVEIINNDILKVDVDNIIAEKMSDCDKIMVVANLPYYITTPILT 135
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ T+ +++Q+E A RL A G ++N L + + DVE++ V K+ F+P
Sbjct: 136 HLIENTEKIDGYVVMMQREVANRLNAKVGTKDYNSLTILLNYYTDVEYLFTVPKKVFVPA 195
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE-WRAFTRTCFSKKNKTL 212
P V+S+VV I K E + +D+ + F R+CF ++ KTL
Sbjct: 196 PNVESAVVKIMTK-EKKEFEVDQKFFKFVRSCFVQRRKTL 234
>gi|423693908|ref|ZP_17668428.1| dimethyladenosine transferase [Pseudomonas fluorescens SS101]
gi|388001371|gb|EIK62700.1| dimethyladenosine transferase [Pseudomonas fluorescens SS101]
Length = 270
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 119/226 (52%), Gaps = 14/226 (6%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ H+++ GQ+ L + V+D I+R P+D +LEIGPG G LT LL ++ +E
Sbjct: 5 YQHRARKRFGQNFLHDAGVIDRILRSIHAKPEDRLLEIGPGQGALTQGLLASGGQLDVVE 64
Query: 60 IDERMVEILNRRAADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLVA 113
+D+ ++ ILN++ A N+ DALK +F P VV N+PY IS+PL+
Sbjct: 65 LDKDLIPILNQQFAGKA---NFNLHQGDALKFDFNSLNAAPNSLRVVGNLPYNISTPLIF 121
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ R +LQKE RL A PG ++ RL++ V+ VE + +V F P
Sbjct: 122 HLLNNAGIIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPP 181
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P A +P D R F+++ KTL T K
Sbjct: 182 PKVDSAIVRLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNTLK 227
>gi|150387987|ref|YP_001318036.1| dimethyladenosine transferase [Alkaliphilus metalliredigens QYMF]
gi|166987687|sp|A6TJK9.1|RSMA_ALKMQ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|149947849|gb|ABR46377.1| dimethyladenosine transferase [Alkaliphilus metalliredigens QYMF]
Length = 287
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 128/240 (53%), Gaps = 21/240 (8%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L +Q +L+ IV + I PDD V+EIGPG G LT + E + KV AIEID
Sbjct: 21 FSKSLGQNFLIDQNILEDIVDGADIQPDDCVIEIGPGIGTLTQFIAEKAHKVVAIEIDRN 80
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL---------VVANIPYGISSPLVAK 114
++ IL AD + + VI++D LK + Q V+AN+PY +++P+V +
Sbjct: 81 LIPILKHTLAD---YQNVEVINQDVLKVDLHQLIADKFEGKPVKVIANLPYYVTTPIVMR 137
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
+ S +++QKE A R+ A PG ++ L++ V+ + E ++ V F+P P
Sbjct: 138 FLEEKVPVDSLVIMIQKEVAVRMQAGPGTKDYGALSIAVQYYCNPEILLKVPPSVFIPQP 197
Query: 175 KVDSSVVIIRPKAEIPDVNL---DEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLSKQ 231
KV+S V+ ++ E P V + D A + F K+ KTL LL+LSK+
Sbjct: 198 KVESIVIKLQVYPE-PKVKVERDDLMFALVKDAFGKRRKTLLNALSSG-----LLQLSKE 251
>gi|451816958|ref|YP_007453159.1| ribosomal RNA small subunit methyltransferase A [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451782937|gb|AGF53905.1| ribosomal RNA small subunit methyltransferase A [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 281
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 132/239 (55%), Gaps = 15/239 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + VL+ IV + +N +D ++EIGPG G LT +LL +KKV +IE+D
Sbjct: 19 FSKSLGQNFLVDDSVLNDIVSGAEVNDEDFIIEIGPGVGTLTAQLLMKAKKVTSIELDND 78
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFD------LVVANIPYGISSPLVAKLVY 117
++ IL + D H +++ KDALK +F + +VAN+PY +++P++ KL+
Sbjct: 79 LIPILQQELGD---HKNFDLVHKDALKVDFNELIGDEKSVKLVANLPYYVTTPIIVKLLK 135
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
+F+S T+++QKE A R+ A P E+ L+V V+ D + + V F+P PKV+
Sbjct: 136 EGYNFKSLTIMIQKEVAERINAEPNTKEYGSLSVLVQYYCDTKILRKVPPTCFIPRPKVE 195
Query: 178 SSVV----IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLSKQK 232
S V+ + P+ + + L R F+ + KTL K K ++ L + +K
Sbjct: 196 SIVIRLDKLDEPRVKAKSIAL--MFELVRAGFNMRRKTLWNAAKSLKVNVDALEKAFEK 252
>gi|448611918|ref|ZP_21662348.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloferax mucosum ATCC BAA-1512]
gi|445742679|gb|ELZ94173.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloferax mucosum ATCC BAA-1512]
Length = 287
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 118/210 (56%), Gaps = 9/210 (4%)
Query: 7 SKGQHILTNQRVLDSIVRKSSINPDDT-VLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
++ QH L + RV+D I + D + VLEIG G G LT +LL V+ +V +E D
Sbjct: 31 NRDQHFLIDDRVVDRIPTYLPADADRSHVLEIGGGPGVLTDRLLAVADRVTVVEQDRSFA 90
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSA 125
+ L R AD+ DRL V+ DAL+ E P+F V+N+PYGISS + +L+ K
Sbjct: 91 DHLRREFADAIAADRLTVLEGDALELELPEFTACVSNLPYGISSEISFRLLPRGKPL--- 147
Query: 126 TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP 185
L+ QKEF R+ A G SE+ RL+V+ + DVE V + F P P V S++V I P
Sbjct: 148 VLMFQKEFGERMAAESGTSEYGRLSVSAQHYGDVEVCEIVPREAFDPKPAVQSAIVRITP 207
Query: 186 KAEIPDVNLDE---WRAFTRTCFSKKNKTL 212
+A PD +D+ + F + F+++ KT+
Sbjct: 208 RA--PDYEVDDEEFFFDFVKALFTQRRKTI 235
>gi|395796297|ref|ZP_10475595.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas sp. Ag1]
gi|421139613|ref|ZP_15599647.1| dimethyladenosine transferase [Pseudomonas fluorescens BBc6R8]
gi|395339599|gb|EJF71442.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas sp. Ag1]
gi|404509185|gb|EKA23121.1| dimethyladenosine transferase [Pseudomonas fluorescens BBc6R8]
Length = 270
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 120/226 (53%), Gaps = 14/226 (6%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ H+++ GQ+ L + V+D I+R P+D +LEIGPG G LT LL+ ++ +E
Sbjct: 5 YQHRARKRFGQNFLHDAGVIDRILRSIHAKPEDRLLEIGPGQGALTQGLLKSGGQLDVVE 64
Query: 60 IDERMVEILNRRAADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLVA 113
+D+ ++ ILN++ A N+ DALK +F P VV N+PY IS+PL+
Sbjct: 65 LDKDLIPILNQQFAGM---PNFNLHQGDALKFDFTSLNAAPNSLRVVGNLPYNISTPLIF 121
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ R +LQKE RL A PG ++ RL++ V+ VE + +V F P
Sbjct: 122 HLLNNAGIIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPP 181
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P A +P D R F+++ KTL T K
Sbjct: 182 PKVDSAIVRLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNTLK 227
>gi|423618776|ref|ZP_17594609.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD115]
gi|401252618|gb|EJR58874.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD115]
Length = 292
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 124/220 (56%), Gaps = 15/220 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + VL+ IV + I + +EIGPG G LT +L + +KKV A EID+R
Sbjct: 21 FKKSLGQNFLIDTNVLNRIVDHAEIGSESGAIEIGPGIGALTEQLAKRAKKVVAFEIDQR 80
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEF-----PQFD-----LVVANIPYGISSPLVA 113
++ IL+ A + + VI+KD LK + QF+ +VVAN+PY I++P++
Sbjct: 81 LLPILDETLAP---YSNVTVINKDVLKADVHEVFSEQFEEGQDVMVVANLPYYITTPILF 137
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
KL+ R +++QKE RL A PG E+ L++ ++ +VE VM V + F+P
Sbjct: 138 KLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVFVPQ 197
Query: 174 PKVDSSVV--IIRPKAEIPDVNLDEWRAFTRTCFSKKNKT 211
P VDS+++ + RPK + N + R F+++ KT
Sbjct: 198 PNVDSAIIRLLKRPKPVVKVTNETFFFEVVRASFAQRRKT 237
>gi|270158275|ref|ZP_06186932.1| dimethyladenosine transferase [Legionella longbeachae D-4968]
gi|289163469|ref|YP_003453607.1| dimethyladenosine transferase (16S rRNA dimethylase) [Legionella
longbeachae NSW150]
gi|269990300|gb|EEZ96554.1| dimethyladenosine transferase [Legionella longbeachae D-4968]
gi|288856642|emb|CBJ10453.1| putative dimethyladenosine transferase (16S rRNA dimethylase)
[Legionella longbeachae NSW150]
Length = 256
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 112/217 (51%), Gaps = 8/217 (3%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQ+ L NQ +++ IV + P D +LEIGPG G LT LL + A+EID +
Sbjct: 7 KRFGQNFLQNQHIINRIVHAINPQPQDNMLEIGPGLGALTQSLLRYLNHLTAVEIDTDLQ 66
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFD---LVVANIPYGISSPLVAKLVYGTKSF 122
+ L SG D+L++I+ DAL ++ QF VV N+PY IS+PL+ L+ T S
Sbjct: 67 KYLTEL---SGIADKLHLIAADALTLDYNQFGPNLRVVGNLPYNISTPLLIHLLKFTASI 123
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
+LQKE R+ A PG + RL V ++ VE + DV F P PKVDS+VV
Sbjct: 124 EDMHFMLQKEVVERMAAQPGCKAYGRLTVMLQYHCTVEHLFDVPPEAFDPKPKVDSAVVR 183
Query: 183 IRPKAEIP--DVNLDEWRAFTRTCFSKKNKTLGATFK 217
+ P P + ++ F+ + KTL K
Sbjct: 184 LVPHRISPFEQIAVERLEYLVAHAFAMRRKTLNNNLK 220
>gi|395495209|ref|ZP_10426788.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas sp. PAMC 25886]
Length = 270
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 120/226 (53%), Gaps = 14/226 (6%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ H+++ GQ+ L + V+D I+R P+D +LEIGPG G LT LL+ ++ +E
Sbjct: 5 YQHRARKRFGQNFLHDAGVIDRILRSIHAKPEDRLLEIGPGQGALTQGLLKSGGQLDVVE 64
Query: 60 IDERMVEILNRRAADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLVA 113
+D+ ++ ILN++ A N+ DALK +F P VV N+PY IS+PL+
Sbjct: 65 LDKDLIPILNQQFASM---PNFNLHQGDALKFDFNSLNAAPNSLRVVGNLPYNISTPLIF 121
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ R +LQKE RL A PG ++ RL++ V+ VE + +V F P
Sbjct: 122 HLLNNAGIIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPP 181
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P A +P D R F+++ KTL T K
Sbjct: 182 PKVDSAIVRLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNTLK 227
>gi|388467103|ref|ZP_10141313.1| dimethyladenosine transferase [Pseudomonas synxantha BG33R]
gi|388010683|gb|EIK71870.1| dimethyladenosine transferase [Pseudomonas synxantha BG33R]
Length = 270
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 119/226 (52%), Gaps = 14/226 (6%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ H+++ GQ+ L + V+D I+R P+D +LEIGPG G LT LL ++ +E
Sbjct: 5 YQHRARKRFGQNFLHDAGVIDRILRSIHAKPEDRLLEIGPGQGALTQGLLASGGQLDVVE 64
Query: 60 IDERMVEILNRRAADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLVA 113
+D+ ++ ILN++ A N+ DALK +F P VV N+PY IS+PL+
Sbjct: 65 LDKDLIPILNQQFAGK---PNFNLHQGDALKFDFNSLNAAPNSLRVVGNLPYNISTPLIF 121
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ R +LQKE RL A PG ++ RL++ V+ VE + +V F P
Sbjct: 122 HLLNNAGIIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPP 181
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P A +P D R F+++ KTL T K
Sbjct: 182 PKVDSAIVRLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNTLK 227
>gi|289193112|ref|YP_003459053.1| dimethyladenosine transferase [Methanocaldococcus sp. FS406-22]
gi|288939562|gb|ADC70317.1| dimethyladenosine transferase [Methanocaldococcus sp. FS406-22]
Length = 274
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 118/207 (57%), Gaps = 8/207 (3%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQ L ++ + V + I DD VLEIG G G LT +L + +KKV+ IEID+ +
Sbjct: 9 GQCFLIDKNFVKKAVESAEITKDDIVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYA 68
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDL--VVANIPYGISSPLVAKLVYGTKSFRSAT 126
N+ + ++ + +I DALK + D VVAN+PY ISSP+ KL+ K F A
Sbjct: 69 NKLKEN---YNNIEIIWGDALKVNLDELDFNKVVANLPYQISSPITFKLI--KKGFDLAV 123
Query: 127 LLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP- 185
L+ Q EFARR++A G ++ RL+V V+ ADVE V V F P PKV S++V I+P
Sbjct: 124 LMYQYEFARRMVAKEGTKDYGRLSVAVQSRADVEIVAKVPPTAFSPRPKVYSAIVKIKPN 183
Query: 186 KAEIPDVNLDEWRAFTRTCFSKKNKTL 212
K + N D + F RT F +NK++
Sbjct: 184 KNKYHIENEDFFDDFLRTIFQHRNKSV 210
>gi|402835685|ref|ZP_10884248.1| dimethyladenosine transferase [Mogibacterium sp. CM50]
gi|402273967|gb|EJU23157.1| dimethyladenosine transferase [Mogibacterium sp. CM50]
Length = 306
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/226 (38%), Positives = 124/226 (54%), Gaps = 20/226 (8%)
Query: 3 FFH-KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
F H KS GQ+ L +Q V+D IV S I+ V+E+GPG G LT +L+EV+ V AIE+D
Sbjct: 37 FKHAKSLGQNFLNDQNVIDDIVAGSLIDEQTLVIEVGPGEGALTSELVEVAGYVIAIELD 96
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFP--------QFDL----VVANIPYGISS 109
+R++ IL + A HD VI D LK + + DL VV N+PY I++
Sbjct: 97 DRLIPILRTKFA---LHDNFEVIHGDILKADIESIVNDAMRKHDLTRTRVVGNLPYYITT 153
Query: 110 PLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRD 169
P++ KL+ F S T+++QKE RLLA PG + V V+ + DVS+
Sbjct: 154 PIIIKLIESKAEFESLTVMMQKEVGDRLLAEPGTKLAGAITYAVHYRCTVDKICDVSREA 213
Query: 170 FLPCPKVDSSVVIIRPKAEIPDVNL-DEWRAF--TRTCFSKKNKTL 212
F P PKVDS V+ + + P V++ DE R F + FS + KTL
Sbjct: 214 FYPVPKVDSLVLRLDMRGA-PAVDVADEDRFFRCIKAGFSMRRKTL 258
>gi|332798095|ref|YP_004459594.1| ribosomal RNA small subunit methyltransferase A [Tepidanaerobacter
acetatoxydans Re1]
gi|438000996|ref|YP_007270739.1| Dimethyladenosine transferase [Tepidanaerobacter acetatoxydans Re1]
gi|332695830|gb|AEE90287.1| Ribosomal RNA small subunit methyltransferase A [Tepidanaerobacter
acetatoxydans Re1]
gi|432177790|emb|CCP24763.1| Dimethyladenosine transferase [Tepidanaerobacter acetatoxydans Re1]
Length = 276
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 126/225 (56%), Gaps = 15/225 (6%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQH L + R L S++ + ++P+D VLEIGPG G LTL+L +K+V A+E D +++
Sbjct: 10 KRLGQHFLIDSRPLLSMIEAAQLSPEDEVLEIGPGLGVLTLELGTRAKRVVAVEKDRQLI 69
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDL--------VVANIPYGISSPLVAKLVY 117
+L+ D + ++ +D LK + + V+AN+PY I++P++ K++
Sbjct: 70 PVLDDLTRD---FKNICILEEDVLKLDLEKMSESLFGGRFKVIANLPYYITNPIIMKIIE 126
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
A L++QKE A+RL A PG ++ L++ VKL ADV + + + FLP PKV+
Sbjct: 127 NRNMVTLAVLMVQKEVAQRLTACPGKKDYGILSIAVKLYADVNMICTIGRESFLPPPKVE 186
Query: 178 SSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTLGATFKQK 219
S+VV + + E P V L + F F ++ KT+ + K +
Sbjct: 187 SAVVRLTLRQE-PRVQLKDESFFFKVVEAAFGERRKTIKNSLKSR 230
>gi|206972590|ref|ZP_03233533.1| dimethyladenosine transferase [Bacillus cereus AH1134]
gi|206732492|gb|EDZ49671.1| dimethyladenosine transferase [Bacillus cereus AH1134]
Length = 292
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 124/220 (56%), Gaps = 15/220 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + VL+ IV + I + +EIGPG G LT +L + +KKV A EID+R
Sbjct: 21 FKKSLGQNFLIDTNVLNRIVDHAEIGSESGAIEIGPGIGALTEQLAKRAKKVVAFEIDQR 80
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEF-----PQFD-----LVVANIPYGISSPLVA 113
++ IL+ A G + VI+KD LK + QF+ +VVAN+PY I++P++
Sbjct: 81 LLPILDETLAPYG---NVTVINKDVLKADVHEVFNEQFEEGQDVMVVANLPYYITTPILF 137
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
KL+ R +++QKE RL A PG E+ L++ ++ +VE VM V + F+P
Sbjct: 138 KLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVFVPQ 197
Query: 174 PKVDSSVV--IIRPKAEIPDVNLDEWRAFTRTCFSKKNKT 211
P VDS+++ + RPK + + + R F+++ KT
Sbjct: 198 PNVDSTIIRLLKRPKPVVEVTDETFFFEVVRASFAQRRKT 237
>gi|30018312|ref|NP_829943.1| dimethyladenosine transferase [Bacillus cereus ATCC 14579]
gi|75759603|ref|ZP_00739689.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218232555|ref|YP_002364891.1| dimethyladenosine transferase [Bacillus cereus B4264]
gi|218895177|ref|YP_002443588.1| dimethyladenosine transferase [Bacillus cereus G9842]
gi|296500873|ref|YP_003662573.1| dimethyladenosine transferase [Bacillus thuringiensis BMB171]
gi|365164140|ref|ZP_09360225.1| ribosomal RNA small subunit methyltransferase A [Bacillus sp.
7_6_55CFAA_CT2]
gi|384184124|ref|YP_005570020.1| dimethyladenosine transferase [Bacillus thuringiensis serovar
chinensis CT-43]
gi|402562867|ref|YP_006605591.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Bacillus
thuringiensis HD-771]
gi|410672413|ref|YP_006924784.1| ribosomal RNA small subunit methyltransferase A [Bacillus
thuringiensis Bt407]
gi|423364604|ref|ZP_17342073.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD022]
gi|423387006|ref|ZP_17364261.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG1X1-2]
gi|423410733|ref|ZP_17387853.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG3O-2]
gi|423427594|ref|ZP_17404625.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG3X2-2]
gi|423433483|ref|ZP_17410487.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG4O-1]
gi|423438922|ref|ZP_17415903.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG4X12-1]
gi|423506603|ref|ZP_17483192.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HD73]
gi|423526660|ref|ZP_17503105.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HuB1-1]
gi|423565601|ref|ZP_17541876.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
MSX-A1]
gi|423589340|ref|ZP_17565426.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD045]
gi|423632839|ref|ZP_17608584.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD154]
gi|423644678|ref|ZP_17620295.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD166]
gi|423651362|ref|ZP_17626932.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD169]
gi|423658436|ref|ZP_17633735.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD200]
gi|434378684|ref|YP_006613328.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus thuringiensis HD-789]
gi|449086707|ref|YP_007419148.1| dimethyladenosine transferase [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|452196417|ref|YP_007476498.1| SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|33516920|sp|Q81JA5.1|RSMA_BACCR RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226729753|sp|B7ISV1.1|RSMA_BACC2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226729754|sp|B7HIK9.1|RSMA_BACC4 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|29893852|gb|AAP07144.1| Dimethyladenosine transferase [Bacillus cereus ATCC 14579]
gi|74492894|gb|EAO56024.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218160512|gb|ACK60504.1| dimethyladenosine transferase [Bacillus cereus B4264]
gi|218541640|gb|ACK94034.1| dimethyladenosine transferase [Bacillus cereus G9842]
gi|296321925|gb|ADH04853.1| dimethyladenosine transferase [Bacillus thuringiensis BMB171]
gi|326937833|gb|AEA13729.1| dimethyladenosine transferase [Bacillus thuringiensis serovar
chinensis CT-43]
gi|363613155|gb|EHL64677.1| ribosomal RNA small subunit methyltransferase A [Bacillus sp.
7_6_55CFAA_CT2]
gi|401072716|gb|EJP81178.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD022]
gi|401107989|gb|EJQ15925.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG3X2-2]
gi|401109964|gb|EJQ17881.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG3O-2]
gi|401111546|gb|EJQ19435.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG4O-1]
gi|401115410|gb|EJQ23262.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG4X12-1]
gi|401193678|gb|EJR00682.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
MSX-A1]
gi|401223993|gb|EJR30553.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD045]
gi|401258883|gb|EJR65064.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD154]
gi|401269462|gb|EJR75492.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD166]
gi|401278414|gb|EJR84347.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD169]
gi|401287769|gb|EJR93540.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD200]
gi|401630260|gb|EJS48066.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG1X1-2]
gi|401791519|gb|AFQ17558.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus thuringiensis HD-771]
gi|401877241|gb|AFQ29408.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus thuringiensis HD-789]
gi|402447428|gb|EJV79280.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HD73]
gi|402455153|gb|EJV86937.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HuB1-1]
gi|409171542|gb|AFV15847.1| ribosomal RNA small subunit methyltransferase A [Bacillus
thuringiensis Bt407]
gi|449020464|gb|AGE75627.1| dimethyladenosine transferase [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|452101810|gb|AGF98749.1| SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 292
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 124/220 (56%), Gaps = 15/220 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + VL+ IV + I + +EIGPG G LT +L + +KKV A EID+R
Sbjct: 21 FKKSLGQNFLIDTNVLNRIVDHAEIGSESGAIEIGPGIGALTEQLAKRAKKVVAFEIDQR 80
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEF-----PQFD-----LVVANIPYGISSPLVA 113
++ IL+ A G + VI+KD LK + QF+ +VVAN+PY I++P++
Sbjct: 81 LLPILDETLAPYG---NVTVINKDVLKADVHEVFNEQFEEGQDVMVVANLPYYITTPILF 137
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
KL+ R +++QKE RL A PG E+ L++ ++ +VE VM V + F+P
Sbjct: 138 KLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVFVPQ 197
Query: 174 PKVDSSVV--IIRPKAEIPDVNLDEWRAFTRTCFSKKNKT 211
P VDS+++ + RPK + + + R F+++ KT
Sbjct: 198 PNVDSAIIRLLKRPKPVVEVTDETFFFEVVRASFAQRRKT 237
>gi|229592954|ref|YP_002875073.1| dimethyladenosine transferase [Pseudomonas fluorescens SBW25]
gi|229364820|emb|CAY52848.1| dimethyladenosine transferase [Pseudomonas fluorescens SBW25]
Length = 270
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 119/226 (52%), Gaps = 14/226 (6%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ H+++ GQ+ L + V+D I+R P+D +LEIGPG G LT LL ++ +E
Sbjct: 5 YQHRARKRFGQNFLHDAGVIDRILRSIHAKPEDRLLEIGPGQGALTQGLLASGGQLDVVE 64
Query: 60 IDERMVEILNRRAADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLVA 113
+D+ ++ ILN++ A N+ DALK +F P VV N+PY IS+PL+
Sbjct: 65 LDKDLIPILNQQFAGM---PNFNLHQGDALKFDFNTLNAAPNSLRVVGNLPYNISTPLIF 121
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ R +LQKE RL A PG ++ RL++ V+ VE + +V F P
Sbjct: 122 HLLNNAGIIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPP 181
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P A +P D R F+++ KTL T K
Sbjct: 182 PKVDSAIVRLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNTLK 227
>gi|30260231|ref|NP_842608.1| dimethyladenosine transferase [Bacillus anthracis str. Ames]
gi|42779120|ref|NP_976367.1| dimethyladenosine transferase [Bacillus cereus ATCC 10987]
gi|47525294|ref|YP_016643.1| dimethyladenosine transferase [Bacillus anthracis str. 'Ames
Ancestor']
gi|47569890|ref|ZP_00240557.1| dimethyladenosine transferase [Bacillus cereus G9241]
gi|49183075|ref|YP_026327.1| dimethyladenosine transferase [Bacillus anthracis str. Sterne]
gi|49477600|ref|YP_034395.1| dimethyladenosine transferase [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52145175|ref|YP_081654.1| dimethyladenosine transferase [Bacillus cereus E33L]
gi|65317501|ref|ZP_00390460.1| COG0030: Dimethyladenosine transferase (rRNA methylation) [Bacillus
anthracis str. A2012]
gi|165872549|ref|ZP_02217181.1| dimethyladenosine transferase [Bacillus anthracis str. A0488]
gi|167635072|ref|ZP_02393389.1| dimethyladenosine transferase [Bacillus anthracis str. A0442]
gi|167641541|ref|ZP_02399789.1| dimethyladenosine transferase [Bacillus anthracis str. A0193]
gi|170688890|ref|ZP_02880092.1| dimethyladenosine transferase [Bacillus anthracis str. A0465]
gi|170707547|ref|ZP_02898000.1| dimethyladenosine transferase [Bacillus anthracis str. A0389]
gi|177655321|ref|ZP_02936850.1| dimethyladenosine transferase [Bacillus anthracis str. A0174]
gi|190568974|ref|ZP_03021875.1| dimethyladenosine transferase [Bacillus anthracis str.
Tsiankovskii-I]
gi|196036349|ref|ZP_03103746.1| dimethyladenosine transferase [Bacillus cereus W]
gi|196041767|ref|ZP_03109057.1| dimethyladenosine transferase [Bacillus cereus NVH0597-99]
gi|206977937|ref|ZP_03238824.1| dimethyladenosine transferase [Bacillus cereus H3081.97]
gi|217957617|ref|YP_002336159.1| dimethyladenosine transferase [Bacillus cereus AH187]
gi|218901242|ref|YP_002449076.1| dimethyladenosine transferase [Bacillus cereus AH820]
gi|222093811|ref|YP_002527860.1| dimethyladenosine transferase [Bacillus cereus Q1]
gi|227812714|ref|YP_002812723.1| dimethyladenosine transferase [Bacillus anthracis str. CDC 684]
gi|229601390|ref|YP_002864692.1| dimethyladenosine transferase [Bacillus anthracis str. A0248]
gi|254682332|ref|ZP_05146193.1| dimethyladenosine transferase [Bacillus anthracis str. CNEVA-9066]
gi|254724182|ref|ZP_05185967.1| dimethyladenosine transferase [Bacillus anthracis str. A1055]
gi|254733577|ref|ZP_05191298.1| dimethyladenosine transferase [Bacillus anthracis str. Western
North America USA6153]
gi|254744655|ref|ZP_05202334.1| dimethyladenosine transferase [Bacillus anthracis str. Kruger B]
gi|254756360|ref|ZP_05208389.1| dimethyladenosine transferase [Bacillus anthracis str. Vollum]
gi|254762416|ref|ZP_05214258.1| dimethyladenosine transferase [Bacillus anthracis str. Australia
94]
gi|300119136|ref|ZP_07056837.1| dimethyladenosine transferase [Bacillus cereus SJ1]
gi|301051777|ref|YP_003789988.1| dimethyladenosine transferase [Bacillus cereus biovar anthracis
str. CI]
gi|375282138|ref|YP_005102571.1| dimethyladenosine transferase [Bacillus cereus NC7401]
gi|384177947|ref|YP_005563709.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Bacillus
thuringiensis serovar finitimus YBT-020]
gi|386733909|ref|YP_006207090.1| Dimethyladenosine transferase [Bacillus anthracis str. H9401]
gi|402554372|ref|YP_006595643.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Bacillus
cereus FRI-35]
gi|421510658|ref|ZP_15957547.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus anthracis str. UR-1]
gi|421640732|ref|ZP_16081310.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus anthracis str. BF1]
gi|423357815|ref|ZP_17335407.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
IS075]
gi|423374905|ref|ZP_17352242.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
AND1407]
gi|423554025|ref|ZP_17530351.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
ISP3191]
gi|423571992|ref|ZP_17548208.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
MSX-A12]
gi|423572816|ref|ZP_17548935.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
MSX-D12]
gi|423608134|ref|ZP_17584026.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD102]
gi|33516921|sp|Q81W00.1|RSMA_BACAN RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|62900500|sp|Q63HJ1.1|RSMA_BACCZ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|62900530|sp|Q6HPX5.1|RSMA_BACHK RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|62900550|sp|Q73FG7.1|RSMA_BACC1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226729752|sp|B7JK47.1|RSMA_BACC0 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226729755|sp|B7HPV2.1|RSMA_BACC7 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|254807857|sp|C3P9I6.1|RSMA_BACAA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|254807858|sp|C3LJ13.1|RSMA_BACAC RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|254807860|sp|B9IZC4.1|RSMA_BACCQ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|30253552|gb|AAP24094.1| dimethyladenosine transferase [Bacillus anthracis str. Ames]
gi|42735035|gb|AAS38975.1| dimethyladenosine transferase [Bacillus cereus ATCC 10987]
gi|47500442|gb|AAT29118.1| dimethyladenosine transferase [Bacillus anthracis str. 'Ames
Ancestor']
gi|47553424|gb|EAL11808.1| dimethyladenosine transferase [Bacillus cereus G9241]
gi|49177002|gb|AAT52378.1| dimethyladenosine transferase [Bacillus anthracis str. Sterne]
gi|49329156|gb|AAT59802.1| dimethyladenosine transferase [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|51978644|gb|AAU20194.1| dimethyladenosine transferase [Bacillus cereus E33L]
gi|164711677|gb|EDR17222.1| dimethyladenosine transferase [Bacillus anthracis str. A0488]
gi|167510526|gb|EDR85924.1| dimethyladenosine transferase [Bacillus anthracis str. A0193]
gi|167529546|gb|EDR92296.1| dimethyladenosine transferase [Bacillus anthracis str. A0442]
gi|170127543|gb|EDS96417.1| dimethyladenosine transferase [Bacillus anthracis str. A0389]
gi|170667114|gb|EDT17875.1| dimethyladenosine transferase [Bacillus anthracis str. A0465]
gi|172080162|gb|EDT65255.1| dimethyladenosine transferase [Bacillus anthracis str. A0174]
gi|190559898|gb|EDV13882.1| dimethyladenosine transferase [Bacillus anthracis str.
Tsiankovskii-I]
gi|195990979|gb|EDX54950.1| dimethyladenosine transferase [Bacillus cereus W]
gi|196027387|gb|EDX66004.1| dimethyladenosine transferase [Bacillus cereus NVH0597-99]
gi|206743843|gb|EDZ55263.1| dimethyladenosine transferase [Bacillus cereus H3081.97]
gi|217065788|gb|ACJ80038.1| dimethyladenosine transferase [Bacillus cereus AH187]
gi|218538262|gb|ACK90660.1| dimethyladenosine transferase [Bacillus cereus AH820]
gi|221237858|gb|ACM10568.1| dimethyladenosine transferase [Bacillus cereus Q1]
gi|227006542|gb|ACP16285.1| dimethyladenosine transferase [Bacillus anthracis str. CDC 684]
gi|229265798|gb|ACQ47435.1| dimethyladenosine transferase [Bacillus anthracis str. A0248]
gi|298723458|gb|EFI64199.1| dimethyladenosine transferase [Bacillus cereus SJ1]
gi|300373946|gb|ADK02850.1| dimethyladenosine transferase [Bacillus cereus biovar anthracis
str. CI]
gi|324324031|gb|ADY19291.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus thuringiensis serovar finitimus YBT-020]
gi|358350659|dbj|BAL15831.1| dimethyladenosine transferase [Bacillus cereus NC7401]
gi|384383761|gb|AFH81422.1| Dimethyladenosine transferase [Bacillus anthracis str. H9401]
gi|401073996|gb|EJP82404.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
IS075]
gi|401093387|gb|EJQ01488.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
AND1407]
gi|401182106|gb|EJQ89248.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
ISP3191]
gi|401199126|gb|EJR06036.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
MSX-A12]
gi|401216740|gb|EJR23446.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
MSX-D12]
gi|401238631|gb|EJR45067.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD102]
gi|401795582|gb|AFQ09441.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus cereus FRI-35]
gi|401819279|gb|EJT18460.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus anthracis str. UR-1]
gi|403392111|gb|EJY89369.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus anthracis str. BF1]
Length = 292
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 124/220 (56%), Gaps = 15/220 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + VL+ IV + I + +EIGPG G LT +L + +KKV A EID+R
Sbjct: 21 FKKSLGQNFLIDTNVLNRIVDHAEIGSESGAIEIGPGIGALTEQLAKRAKKVVAFEIDQR 80
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEF-----PQFD-----LVVANIPYGISSPLVA 113
++ IL+ A G + VI+KD LK + QF+ +VVAN+PY I++P++
Sbjct: 81 LLPILDETLAPYG---NVTVINKDVLKADVHEVFSEQFEEGQDVMVVANLPYYITTPILF 137
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
KL+ R +++QKE RL A PG E+ L++ ++ +VE VM V + F+P
Sbjct: 138 KLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVFVPQ 197
Query: 174 PKVDSSVV--IIRPKAEIPDVNLDEWRAFTRTCFSKKNKT 211
P VDS+++ + RPK + + + R F+++ KT
Sbjct: 198 PNVDSAIIRLLKRPKPVVEVTDETFFFEVVRASFAQRRKT 237
>gi|300853385|ref|YP_003778369.1| dimethyladenosine transferase [Clostridium ljungdahlii DSM 13528]
gi|300433500|gb|ADK13267.1| dimethyladenosine transferase [Clostridium ljungdahlii DSM 13528]
Length = 280
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 127/226 (56%), Gaps = 13/226 (5%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + VLD IV + I+ +D ++EIGPG G LT +LL+ + KV AIE+D
Sbjct: 17 FSKSLGQNFLIDNTVLDDIVNSADISKEDFIIEIGPGVGTLTRELLKKAGKVCAIELDSD 76
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFD------LVVANIPYGISSPLVAKLVY 117
++ IL D +I KDALK +F + +VAN+PY +++P++ +L+
Sbjct: 77 LIPILKEELKD---FKNFELIHKDALKIDFNKIIDDEKNVKIVANLPYYVTTPIITRLLN 133
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
+F++ T+++QKE R+ + P ++ L++ V+ DVE + VS F+P PKV+
Sbjct: 134 ENYNFKTLTIMIQKEVGERISSEPNCKQYGALSILVQYYCDVEVIRKVSPLSFIPRPKVE 193
Query: 178 SSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTLGATFKQKK 220
S+VI K + P V + + + F R F+ + KTL K K
Sbjct: 194 -SIVIKLTKLDEPRVKVKDKKLFFKVVRCSFNMRRKTLWNAVKTLK 238
>gi|398873142|ref|ZP_10628407.1| dimethyladenosine transferase [Pseudomonas sp. GM74]
gi|398200427|gb|EJM87339.1| dimethyladenosine transferase [Pseudomonas sp. GM74]
Length = 269
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 122/227 (53%), Gaps = 16/227 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ HK++ GQ+ L + V+D I+R +D +LEIGPG G LT LL ++ +E
Sbjct: 5 YQHKARKRFGQNFLHDAGVIDRILRSIHAKAEDRLLEIGPGQGALTQGLLSSGAQLDVVE 64
Query: 60 IDERMVEILNRR-AADSGFHDRLNVISKDALKTEFPQFDLV------VANIPYGISSPLV 112
+D+ ++ ILN++ + S F N+ DALK +F + V V N+PY IS+PL+
Sbjct: 65 LDKDLIPILNQQFSGKSNF----NLHQGDALKFDFNSLNAVPGSLRVVGNLPYNISTPLI 120
Query: 113 AKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
L++ + R +LQKE RL A PG ++ RL++ V+ VE + +V F P
Sbjct: 121 FHLLHNSHLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNP 180
Query: 173 CPKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P A +P D R F+++ KTL T K
Sbjct: 181 PPKVDSAIVRLVPHAVLPHPAKDHRLLERVVREAFNQRRKTLRNTLK 227
>gi|159903252|ref|YP_001550596.1| dimethyladenosine transferase [Prochlorococcus marinus str. MIT
9211]
gi|226732610|sp|A9B9Y0.1|RSMA_PROM4 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|159888428|gb|ABX08642.1| putative rRNA (adenine-N6,N6)-dimethyltransferase [Prochlorococcus
marinus str. MIT 9211]
Length = 282
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/238 (39%), Positives = 128/238 (53%), Gaps = 19/238 (7%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKK-VHAIEIDERMVEI 67
GQH L + +L+ IV + + +D VLEIGPG G LT KLL VHAIE+D +V
Sbjct: 13 GQHWLKDVAILEKIVEAAELCENDRVLEIGPGRGALTHKLLNSKVSLVHAIELDTDLVVG 72
Query: 68 LNRRAADSGFHD-RLNVISKDALKTEF--P---QFDLVVANIPYGISSPLVAKLV----- 116
L R FH+ R ++ DALK P + + VVANIPY I+SPL+ +L+
Sbjct: 73 LRERF----FHETRFSLKGGDALKISLLPPDGIEVNKVVANIPYNITSPLLERLIGKLGF 128
Query: 117 YGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKV 176
+ + LLLQKE A R+LA PG S F+ ++V V+L+ V DVS + F P PKV
Sbjct: 129 FPETRYERLVLLLQKEVADRILAMPGQSSFSAMSVRVQLLCKSRSVCDVSPKCFKPSPKV 188
Query: 177 DSSVVIIRPKAEIPDVNLD---EWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLSKQ 231
S VV+I P A +N+D + RT F + K L T + + +L L+ Q
Sbjct: 189 HSKVVVIEPFAFSERLNVDIEKRVESLLRTAFLGRRKKLRNTLASIRPLNQLESLADQ 246
>gi|116333120|ref|YP_794647.1| dimethyladenosine transferase [Lactobacillus brevis ATCC 367]
gi|122270191|sp|Q03T56.1|RSMA_LACBA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|116098467|gb|ABJ63616.1| dimethyladenosine transferase [Lactobacillus brevis ATCC 367]
Length = 296
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 127/220 (57%), Gaps = 17/220 (7%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS GQ+ L++ +L +IV +N D V+EIGPG G LT ++ + + KV A EIDE ++
Sbjct: 27 KSLGQNFLSDLNILRNIVAAGDVNDHDNVIEIGPGIGALTEQIAKRAHKVVAFEIDENLL 86
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFP-----QFDL-----VVANIPYGISSPLVAKL 115
+L+ D + + +I++D LK P +F+ +VAN+PY I++P++ +
Sbjct: 87 PVLDETLMD---YKNVKIINEDILKANLPAVVADEFEADRPLKLVANLPYYITTPILMGV 143
Query: 116 VYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPK 175
+ T F + +++Q E A RL+A PG + L+V ++ A VE +V + F+P P
Sbjct: 144 LQSTVRFEAIVVMMQAEVAERLVAEPGTKAYGSLSVIMQYRAHVEIAFNVPRTAFIPQPN 203
Query: 176 VDSSVVIIRPKAEIPDVNLDEWRA---FTRTCFSKKNKTL 212
VDS+++ + P+ +P VN E +A F + CF+ + K+L
Sbjct: 204 VDSAIIRLTPREALP-VNPYEDKALFSFVKGCFAHRRKSL 242
>gi|77461356|ref|YP_350863.1| dimethyladenosine transferase [Pseudomonas fluorescens Pf0-1]
gi|118600888|sp|Q3K5T2.1|RSMA_PSEPF RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|77385359|gb|ABA76872.1| dimethyladenosine transferase [Pseudomonas fluorescens Pf0-1]
Length = 272
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 121/228 (53%), Gaps = 16/228 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ HK++ GQ+ L + V+D I+R + D +LEIGPG G LT +L ++ +E
Sbjct: 5 YQHKARKRFGQNFLHDAGVIDRILRSINAKAGDRMLEIGPGQGALTAGILNSGAQLDVVE 64
Query: 60 IDERMVEILNRR-AADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLV 112
+D+ ++ ILN++ A S F N+ DALK +F P VV N+PY IS+PL+
Sbjct: 65 LDKDLIPILNQQFAGKSNF----NLHQGDALKFDFNSLNAAPNSLRVVGNLPYNISTPLI 120
Query: 113 AKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
L+ R +LQKE RL A PG ++ RL++ V+ VE + +V F P
Sbjct: 121 FHLLNNAGIIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNP 180
Query: 173 CPKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFKQ 218
PKVDS++V + P A +P D R F+++ KTL T KQ
Sbjct: 181 PPKVDSAIVRLVPHAVLPHPAKDHRLLERVVREAFNQRRKTLRNTLKQ 228
>gi|429192096|ref|YP_007177774.1| dimethyladenosine transferase [Natronobacterium gregoryi SP2]
gi|448323875|ref|ZP_21513323.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natronobacterium gregoryi SP2]
gi|429136314|gb|AFZ73325.1| dimethyladenosine transferase [Natronobacterium gregoryi SP2]
gi|445620388|gb|ELY73888.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natronobacterium gregoryi SP2]
Length = 280
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 121/209 (57%), Gaps = 9/209 (4%)
Query: 10 QHILTNQRVLDSI-VRKSSINPDDT-VLEIGPGTGNLTLKLLEVSKKVHAIEIDER---M 64
QH L + RVLD + I+PD + +LEIG GTG LT +LL ++ + A+ + ER +
Sbjct: 21 QHFLVDDRVLDRLPTYLEEIDPDASHLLEIGGGTGALTDRLLALAGEDGAVTVVERDRDL 80
Query: 65 VEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRS 124
L AD+ RL VI DAL+ + P F ++N+PYG+SS + +L+ K
Sbjct: 81 AAFLREEFADAIDAGRLTVIEGDALEVDLPDFTASISNLPYGVSSEISFRLLPEGKPL-- 138
Query: 125 ATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIR 184
L+ Q+EFA R++A PG SE+ RL+V+ + AD E V + K F P P V+S+VV +R
Sbjct: 139 -VLMFQQEFAERMVAEPGTSEYGRLSVSTQHYADAELVETIPKEAFSPPPAVESAVVRLR 197
Query: 185 PKAEIPDV-NLDEWRAFTRTCFSKKNKTL 212
P+ +V N D + F + F+++ KT+
Sbjct: 198 PREPEYEVENEDFFLRFVKALFTQRRKTI 226
>gi|291457904|ref|ZP_06597294.1| dimethyladenosine transferase [Oribacterium sp. oral taxon 078 str.
F0262]
gi|291419448|gb|EFE93167.1| dimethyladenosine transferase [Oribacterium sp. oral taxon 078 str.
F0262]
Length = 291
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 124/223 (55%), Gaps = 18/223 (8%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K GQ+ L ++ VL I+ S I +D VLEIGPG G LT L E ++KV A+E+D++
Sbjct: 21 FQKRFGQNFLIDESVLRDILAASEITREDCVLEIGPGIGTLTQALCESARKVIAVELDKK 80
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFD---------LVVANIPYGISSPLVAK 114
++ IL + +D L +I DAL+ + + V AN+PY I+SP++
Sbjct: 81 LIPILEE---NLSAYDNLRLIQGDALRLDLTKLIGEENDGHPIKVAANLPYYITSPILMS 137
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
L+ RS T+++Q+E A R+ A PG + L++ V+ A ++ + V+ FLP P
Sbjct: 138 LLESRAPIRSITIMVQREVADRMRALPGTKSYGALSLAVQYYAKIDLIRTVASSCFLPRP 197
Query: 175 KVDSSVVIIRPKAEIPDVNLDEWRAF----TRTCFSKKNKTLG 213
VDS+VV + ++E P+ E +AF R+ F+ + KTL
Sbjct: 198 NVDSAVVKLTLRSETPEN--PEEKAFLFRLIRSAFATRRKTLA 238
>gi|218132712|ref|ZP_03461516.1| hypothetical protein BACPEC_00573 [[Bacteroides] pectinophilus ATCC
43243]
gi|217992438|gb|EEC58441.1| dimethyladenosine transferase [[Bacteroides] pectinophilus ATCC
43243]
Length = 296
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 126/230 (54%), Gaps = 14/230 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K GQ+ L + V++ IVR++ I DD VLEIGPG G +T L E +++V A+EID+
Sbjct: 24 FQKRFGQNFLIDGNVVEKIVREAGITKDDFVLEIGPGIGTMTQILCENAREVAAVEIDKN 83
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL---------VVANIPYGISSPLVAK 114
++ IL A +D ++VI++D LK + + VVAN+PY I++P++
Sbjct: 84 LIPILAETLAP---YDNVSVINEDILKVDVRKLAEEKNDGRPIKVVANLPYYITTPIIMG 140
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
L S T+++QKE A+R+ PG ++ L++ V+ AD + V+ V F+P P
Sbjct: 141 LFESHVPLESITIMVQKEVAQRMQVGPGTKDYGALSLAVQFYADAQIVLKVPASCFMPRP 200
Query: 175 KVDSSVVIIRPKAEIPDVNLDEWRAF--TRTCFSKKNKTLGATFKQKKKV 222
VDS+V+ + + P DE F R F+++ KTL + ++
Sbjct: 201 NVDSAVIKLVRHEDAPVKVKDEQFMFRVIRAAFNQRRKTLANSLANSSEL 250
>gi|297618729|ref|YP_003706834.1| dimethyladenosine transferase [Methanococcus voltae A3]
gi|297377706|gb|ADI35861.1| dimethyladenosine transferase [Methanococcus voltae A3]
Length = 275
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 125/225 (55%), Gaps = 8/225 (3%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQ L ++ + + ++++N DD VLEIG G G LT +L +V+KKV+ IE+D+R+
Sbjct: 17 GQCFLKDKNFVKKAINRANLNNDDIVLEIGLGEGVLTKELAKVAKKVYVIELDKRLEIFA 76
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDL--VVANIPYGISSPLVAKLVYGTKSFRSAT 126
N + + +++I +DALK + D +VAN+PY ISSP+ K + K F A
Sbjct: 77 NEVIKE---YPNVSIIWEDALKVDLDSLDFNKIVANLPYQISSPITFKFLERKKGFDLAI 133
Query: 127 LLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPK 186
L+ Q EFA+R+ E+ RL+V V+ ADV+ + V F P PKVDS++V + K
Sbjct: 134 LMYQYEFAKRMAGKEDTKEYGRLSVAVQYSADVKMICKVPPTAFSPKPKVDSAIVSLVKK 193
Query: 187 AEIPDVNLDE--WRAFTRTCFSKKNKTLGATFKQKKKVIELLRLS 229
DV LDE ++ + F +NKT+G I+L R S
Sbjct: 194 NPEYDV-LDEKMFKNLLKALFQHRNKTVGKALVNSAHEIKLSRES 237
>gi|150020142|ref|YP_001305496.1| dimethyladenosine transferase [Thermosipho melanesiensis BI429]
gi|149792663|gb|ABR30111.1| dimethyladenosine transferase [Thermosipho melanesiensis BI429]
Length = 258
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/216 (40%), Positives = 121/216 (56%), Gaps = 11/216 (5%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQ+ LTN + IV ++ IN +D VLEIGPG G LT L+ K+ A+EID+R+
Sbjct: 16 KGLGQNFLTNTHIAKKIVERADINENDVVLEIGPGAGTLTEFLVLTGAKIIAVEIDKRLK 75
Query: 66 EILNRRAADSGFHDRLNVISKDALKTE---FPQFDLVVANIPYGISSPLVAKLVYGTKSF 122
IL R +D + +I D LK + P+ VVANIPY I+ ++ K+++ F
Sbjct: 76 PILERFNK----YDNIEIIFVDFLKFDVSVLPKGFKVVANIPYSITGMILKKILFS--DF 129
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
A L++QKE RLL PG ++ N L+V V+ V V DVSK +F+P PKVD SVV+
Sbjct: 130 SKAVLMVQKEVGDRLLLPPG-ADRNFLSVVVQSYTMVRKVFDVSKGNFVPRPKVD-SVVL 187
Query: 183 IRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
K E ++ E+ F CF K KTL K+
Sbjct: 188 EFEKTEDFKYDIKEFWDFVSKCFGAKRKTLQNNLKR 223
>gi|220933005|ref|YP_002509913.1| dimethyladenosine transferase [Halothermothrix orenii H 168]
gi|254807869|sp|B8D0I2.1|RSMA_HALOH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|219994315|gb|ACL70918.1| dimethyladenosine transferase [Halothermothrix orenii H 168]
Length = 301
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 130/232 (56%), Gaps = 17/232 (7%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
HK GQ+ L +Q ++D I+ + +N +D V+EIGPG G+LT K++ S +V A E D+R
Sbjct: 22 LHKGLGQNFLIDQNIVDKIINTADLNNEDIVIEIGPGIGSLTQKIVPRSGRVFAFEKDKR 81
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQF----------DLVVANIPYGISSPLVA 113
+V++L R +G+ + L VI +D L+ ++ F V+AN+PY I++P++
Sbjct: 82 LVKVL--RELFNGY-NHLEVIGQDVLEVDWKHFFDSRGISDRSVKVLANLPYYITTPVIM 138
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ +F L++QKE A R+ A+PG ++ L+V V+ +VE V F+P
Sbjct: 139 GLLESNITFSLMVLMVQKEVADRMAAAPGSKDYGALSVAVQYYGEVEIFHKVPPTVFIPR 198
Query: 174 PKVDSSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTLGATFKQKKKV 222
P+V SS++ I+P +E P + F R F ++ KTL + + ++
Sbjct: 199 PRVYSSIIKIKPHSE-PVYRVKNEGFFFKMVRAIFQQRRKTLKNSLTKSSEI 249
>gi|168205777|ref|ZP_02631782.1| dimethyladenosine transferase [Clostridium perfringens E str.
JGS1987]
gi|168209755|ref|ZP_02635380.1| dimethyladenosine transferase [Clostridium perfringens B str. ATCC
3626]
gi|168217634|ref|ZP_02643259.1| dimethyladenosine transferase [Clostridium perfringens NCTC 8239]
gi|170662648|gb|EDT15331.1| dimethyladenosine transferase [Clostridium perfringens E str.
JGS1987]
gi|170712059|gb|EDT24241.1| dimethyladenosine transferase [Clostridium perfringens B str. ATCC
3626]
gi|182380335|gb|EDT77814.1| dimethyladenosine transferase [Clostridium perfringens NCTC 8239]
Length = 285
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 130/232 (56%), Gaps = 13/232 (5%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + V IV + + DD V+EIGPG G LT++LL+ +K+V AIE+D
Sbjct: 22 FSKSLGQNFLIDDSVPRDIVNGADVCEDDLVIEIGPGVGTLTVQLLKRAKRVVAIELDSS 81
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFD------LVVANIPYGISSPLVAKLVY 117
++ IL A+ G + + +I DALK +F + +VAN+PY +++P++ L+
Sbjct: 82 LIPIL---TAELGDNPKFQLIHNDALKVDFNEIIGAEKSVKLVANLPYYVTTPIIVNLLK 138
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
G +F+S T+++QKE A R+ A P ++ L++ V+ + + V V F+P PKVD
Sbjct: 139 GGYNFKSLTIMIQKEVAERMNAEPNCKDYGALSILVQYYCNTKIVRKVPPSCFIPRPKVD 198
Query: 178 SSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTLGATFKQKKKVIELL 226
S+VI + E P V + + F R F+ + KTL K K EL+
Sbjct: 199 -SIVIRLERLEEPSVKVKNEKLFFEIVRHAFNMRRKTLWNATKNVKLPKELM 249
>gi|170289118|ref|YP_001739356.1| dimethyladenosine transferase [Thermotoga sp. RQ2]
gi|226732634|sp|B1LBH5.1|RSMA_THESQ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|170176621|gb|ACB09673.1| dimethyladenosine transferase [Thermotoga sp. RQ2]
Length = 260
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 131/229 (57%), Gaps = 8/229 (3%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
K GQ L++ R+ IV+ + + P+D V+EIG G G LT +L + +V A EIDE
Sbjct: 14 LKKHLGQVFLSDDRIAKRIVKAADLTPEDVVVEIGAGAGTLTEELTKTGARVIAYEIDES 73
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKT-EFPQFDLVVANIPYGISSPLVAKLVYGTKSF 122
+ IL R + + + + +D LK + P+ + V+NIPY I+ PL+ K++ F
Sbjct: 74 LAPILQERLSK---YPNVELRFEDFLKAKDVPEGAICVSNIPYNITGPLMEKII--EWKF 128
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
+ A +++QKE R+LA PG + L+V V+ +V+ + DVS+ F+P P+VDS+VV
Sbjct: 129 KRAIVMVQKEVGERILAKPGKKTYGYLSVVVQTFYEVKKLFDVSRSCFVPNPEVDSTVVD 188
Query: 183 IRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLSKQ 231
++ K D++ ++++ F F+KK KTL K + E + LS++
Sbjct: 189 LKRKP--VDLDFEKFKKFVSMIFAKKRKTLKNNLKPFLSIFEGVDLSRR 235
>gi|355571047|ref|ZP_09042317.1| Ribosomal RNA small subunit methyltransferase A [Methanolinea tarda
NOBI-1]
gi|354826329|gb|EHF10545.1| Ribosomal RNA small subunit methyltransferase A [Methanolinea tarda
NOBI-1]
Length = 256
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 118/216 (54%), Gaps = 4/216 (1%)
Query: 10 QHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILN 69
QH L +++ ++ I + TVLE+GPG G+LT LLE +V A+EID +VE+L+
Sbjct: 7 QHFLVDRKAIERIAGIIRVE-GRTVLEVGPGRGSLTEALLERGARVVAVEIDPGLVEMLS 65
Query: 70 RRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLL 129
R +RL V+ DA+ P FD+VV+N+PY SS + +L+ F A L+
Sbjct: 66 ERFLREIGENRLVVVHGDAVSCPLPGFDVVVSNLPYSASSKITFRLL--ETGFEEAVLMY 123
Query: 130 QKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAEI 189
Q EFA R+LA G E RL+V V+ V V DV + F P PKV S+V+ I P+ +
Sbjct: 124 QSEFADRMLAPAGTPECGRLSVMVQTYCAVGRVFDVPPQAFSPRPKVRSTVLHIVPREPL 183
Query: 190 -PDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIE 224
P + D + R FS + KT+ + K ++E
Sbjct: 184 FPIRDRDLYARVVRALFSHRRKTVRNSLKSAGSMLE 219
>gi|383786185|ref|YP_005470754.1| dimethyladenosine transferase [Fervidobacterium pennivorans DSM
9078]
gi|383109032|gb|AFG34635.1| dimethyladenosine transferase [Fervidobacterium pennivorans DSM
9078]
Length = 276
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/238 (37%), Positives = 127/238 (53%), Gaps = 13/238 (5%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I KS GQ+ L+N+ IV S +N +DTVLEIG G G LT+ L E V+AIEID
Sbjct: 14 ITLKKSLGQNFLSNEVFAKKIVELSEVNKNDTVLEIGAGAGTLTVALAETGATVYAIEID 73
Query: 62 ERMVEILNRRAADSGFHDRLNVISKD--ALKTEF-PQFDLVVANIPYGISSPLVAKLVYG 118
ER+ IL R +++I D AL F P V+NIPY I++P++ +L++
Sbjct: 74 ERLKPILEERLLT---FPNVHLIFSDFLALDLSFLPSGYKCVSNIPYYITAPILKRLIF- 129
Query: 119 TKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDS 178
F + +++QKE RLL PG S L V ++ VA+VE ++ + K F+P P+VDS
Sbjct: 130 -TPFSALFIMMQKEVGERLLEKPGSSNRGFLTVVLQTVANVEKILTIPKSAFVPNPEVDS 188
Query: 179 SVVIIRPKAEIPDVNLDE----WRAFTRTCFSKKNKTLGATFKQKKKVIELLRLSKQK 232
V+ I K P + + WR F FS+K KT+ K K +L L Q+
Sbjct: 189 VVLKITRKEPFPFADGSQLESFWR-FVSNSFSQKRKTIYNNLKTITKDTNVLELIIQE 245
>gi|359409977|ref|ZP_09202442.1| Ribosomal RNA small subunit methyltransferase A [Clostridium sp.
DL-VIII]
gi|357168861|gb|EHI97035.1| Ribosomal RNA small subunit methyltransferase A [Clostridium sp.
DL-VIII]
Length = 283
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 126/219 (57%), Gaps = 15/219 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + VL+ IV + +N +D V+EIGPG G LT +LL+ +KKV +IE+D
Sbjct: 19 FSKSLGQNFLVDDSVLNDIVDGAEVNDEDFVIEIGPGVGTLTAELLKKAKKVTSIELDND 78
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFD------LVVANIPYGISSPLVAKLVY 117
++ IL + + G ++ +I KDALK +F + +VAN+PY +++P++ KL+
Sbjct: 79 LIPILKQ---ELGEYENFELIHKDALKVDFNELIGTEKSVKLVANLPYYVTTPIIVKLLK 135
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
+F+S T+++QKE A R+ + P E+ L+V V+ + + V F+P PKV+
Sbjct: 136 EGYNFKSLTIMIQKEVAERINSDPDCKEYGALSVLVQYYCNTSIIRKVQPACFIPRPKVE 195
Query: 178 SSVV----IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTL 212
S V+ + P+ + D+N R F+ + KTL
Sbjct: 196 SIVIRLDKLNEPRVKTKDINF--MFELVRAGFNMRRKTL 232
>gi|302388630|ref|YP_003824451.1| dimethyladenosine transferase [Thermosediminibacter oceani DSM
16646]
gi|302199258|gb|ADL06828.1| dimethyladenosine transferase [Thermosediminibacter oceani DSM
16646]
Length = 282
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 131/227 (57%), Gaps = 19/227 (8%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQH L ++ L ++ + +N D VLEIGPG G LTL+L +KKV A+E D ++
Sbjct: 16 KRLGQHFLIDEAPLYKMLEAARLNESDEVLEIGPGLGVLTLELCRRAKKVVAVEKDPNLI 75
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQ-----FD---LVVANIPYGISSPLVAKLVY 117
+L + ++ + ++ +D LK + + FD VVAN+PY I+SP++ K++
Sbjct: 76 PVLEKLTKS---YNNICLLREDVLKLDMEKLWREYFDGKFKVVANLPYYITSPVIMKIIN 132
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
A +++QKE A RL+A+PG+ ++ L+V V+L ADV+ V V + FLP PKVD
Sbjct: 133 NRHLIEMAVIMIQKEVAHRLVAAPGNKDYGILSVAVQLYADVDLVCHVGRSAFLPPPKVD 192
Query: 178 SSVV--IIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTLGATFKQK 219
S+VV +++ + +P L++ R F F ++ KT+ + + +
Sbjct: 193 SAVVRLVLKEGSAVP---LEDERLFFKVVEAAFGERRKTVKNSLRSR 236
>gi|118475813|ref|YP_892964.1| dimethyladenosine transferase [Bacillus thuringiensis str. Al
Hakam]
gi|196047365|ref|ZP_03114578.1| dimethyladenosine transferase [Bacillus cereus 03BB108]
gi|225862093|ref|YP_002747471.1| dimethyladenosine transferase [Bacillus cereus 03BB102]
gi|376264068|ref|YP_005116780.1| Dimethyladenosine transferase [Bacillus cereus F837/76]
gi|166221644|sp|A0R8B4.1|RSMA_BACAH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|254807859|sp|C1ESX0.1|RSMA_BACC3 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|118415038|gb|ABK83457.1| dimethyladenosine transferase [Bacillus thuringiensis str. Al
Hakam]
gi|196021767|gb|EDX60461.1| dimethyladenosine transferase [Bacillus cereus 03BB108]
gi|225788520|gb|ACO28737.1| dimethyladenosine transferase [Bacillus cereus 03BB102]
gi|364509868|gb|AEW53267.1| Dimethyladenosine transferase [Bacillus cereus F837/76]
Length = 292
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 124/220 (56%), Gaps = 15/220 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + VL+ IV + I + +EIGPG G LT +L + +KKV A EID+R
Sbjct: 21 FKKSLGQNFLIDTNVLNRIVDHAEIGSESGAIEIGPGIGALTEQLAKRAKKVVAFEIDQR 80
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEF-----PQFD-----LVVANIPYGISSPLVA 113
++ IL+ A G + VI+KD LK + QF+ +VVAN+PY I++P++
Sbjct: 81 LLPILDETLAPYG---NVTVINKDVLKADVHEVFSEQFEEGQDVMVVANLPYYITTPILF 137
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
KL+ R +++QKE RL A PG E+ L++ ++ +VE VM V + F+P
Sbjct: 138 KLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVFVPQ 197
Query: 174 PKVDSSVV--IIRPKAEIPDVNLDEWRAFTRTCFSKKNKT 211
P VDS+++ + RPK + + + R F+++ KT
Sbjct: 198 PNVDSAIIRLLKRPKPVVEVTDEIFFFEVVRASFAQRRKT 237
>gi|423583691|ref|ZP_17559802.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD014]
gi|423633628|ref|ZP_17609281.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD156]
gi|401208323|gb|EJR15090.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD014]
gi|401283338|gb|EJR89233.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD156]
Length = 292
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/223 (36%), Positives = 126/223 (56%), Gaps = 21/223 (9%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + VL+ IV + I + +EIGPG G LT +L + +KKV A EID+R
Sbjct: 21 FKKSLGQNFLIDTNVLNRIVDHAEIGSESGAIEIGPGIGALTEQLAKRAKKVVAFEIDQR 80
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEF-----PQFD-----LVVANIPYGISSPLVA 113
++ IL+ A G + VI+KD LK + QF+ +VVAN+PY I++P++
Sbjct: 81 LLPILDETLAPYG---NVTVINKDVLKADVHEVFNEQFEEGQDVMVVANLPYYITTPILF 137
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
KL+ R +++QKE RL A PG E+ L++ ++ +VE VM V + F+P
Sbjct: 138 KLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVFVPQ 197
Query: 174 PKVDSSVV--IIRPKAEIPDVNLDEWRAF---TRTCFSKKNKT 211
P VDS+++ + RPK P V + + F R F+++ KT
Sbjct: 198 PNVDSAIIRLLKRPK---PVVEVKDETFFFEVVRASFAQRRKT 237
>gi|375006841|ref|YP_004980470.1| ribosomal RNA small subunit methyltransferase A [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|359285686|gb|AEV17370.1| Ribosomal RNA small subunit methyltransferase A [Geobacillus
thermoleovorans CCB_US3_UF5]
Length = 293
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 120/222 (54%), Gaps = 17/222 (7%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + +L IV + I+PD +EIGPG G LT +L +KKV A EID R
Sbjct: 22 FKKSLGQNFLIDANILRKIVDVADISPDTGAIEIGPGIGALTEQLARRAKKVVAFEIDGR 81
Query: 64 MVEILNRRAADS-GFHDRLNVISKDALKTEFPQF----------DLVVANIPYGISSPLV 112
++ IL AD+ +D + + +D LK + +VVAN+PY +++P++
Sbjct: 82 LLPIL----ADTLSAYDNVRIFHQDVLKADLHAVIAEELADVSDRMVVANLPYYVTTPII 137
Query: 113 AKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
KL+ R ++LQKE A RL A PG ++ L + V+ + E VM V + F+P
Sbjct: 138 MKLLTERLPIRGMVVMLQKEVADRLAAKPGTKDYGSLTIAVQYYTEAEVVMTVPRTVFMP 197
Query: 173 CPKVDSSVVIIRPKAEIPDVNLDEWRAF--TRTCFSKKNKTL 212
P VDS+V+ + + P V DE F R F+++ KTL
Sbjct: 198 QPNVDSAVIRLVKRQHPPVVVDDEGVFFQVVRASFAQRRKTL 239
>gi|18311499|ref|NP_563433.1| dimethyladenosine transferase [Clostridium perfringens str. 13]
gi|110799025|ref|YP_697204.1| dimethyladenosine transferase [Clostridium perfringens ATCC 13124]
gi|110801894|ref|YP_699773.1| dimethyladenosine transferase [Clostridium perfringens SM101]
gi|168213441|ref|ZP_02639066.1| dimethyladenosine transferase [Clostridium perfringens CPE str.
F4969]
gi|169343266|ref|ZP_02864277.1| dimethyladenosine transferase [Clostridium perfringens C str.
JGS1495]
gi|182624345|ref|ZP_02952130.1| dimethyladenosine transferase [Clostridium perfringens D str.
JGS1721]
gi|422347582|ref|ZP_16428493.1| ribosomal RNA small subunit methyltransferase A [Clostridium
perfringens WAL-14572]
gi|422875462|ref|ZP_16921947.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Clostridium perfringens F262]
gi|27151580|sp|Q8XHG8.1|RSMA_CLOPE RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|118600857|sp|Q0TMD6.1|RSMA_CLOP1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|118600859|sp|Q0SQ34.1|RSMA_CLOPS RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|18146183|dbj|BAB82223.1| dimethyladenosine transferase [Clostridium perfringens str. 13]
gi|110673672|gb|ABG82659.1| dimethyladenosine transferase [Clostridium perfringens ATCC 13124]
gi|110682395|gb|ABG85765.1| dimethyladenosine transferase [Clostridium perfringens SM101]
gi|169298564|gb|EDS80645.1| dimethyladenosine transferase [Clostridium perfringens C str.
JGS1495]
gi|170715038|gb|EDT27220.1| dimethyladenosine transferase [Clostridium perfringens CPE str.
F4969]
gi|177910563|gb|EDT72936.1| dimethyladenosine transferase [Clostridium perfringens D str.
JGS1721]
gi|373223852|gb|EHP46196.1| ribosomal RNA small subunit methyltransferase A [Clostridium
perfringens WAL-14572]
gi|380303520|gb|EIA15822.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Clostridium perfringens F262]
Length = 285
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 130/232 (56%), Gaps = 13/232 (5%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + V IV + + DD V+EIGPG G LT++LL+ +K+V AIE+D
Sbjct: 22 FSKSLGQNFLIDDSVPRDIVNGADVCEDDLVIEIGPGVGTLTVQLLKRAKRVVAIELDSS 81
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFD------LVVANIPYGISSPLVAKLVY 117
++ IL A+ G + + +I DALK +F + +VAN+PY +++P++ L+
Sbjct: 82 LIPIL---TAELGDNPKFQLIHNDALKVDFNEIIGDEKSVKLVANLPYYVTTPIIVNLLK 138
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
G +F+S T+++QKE A R+ A P ++ L++ V+ + + V V F+P PKVD
Sbjct: 139 GGYNFKSLTIMIQKEVAERMNAEPNCKDYGALSILVQYYCNTKIVRKVPPSCFIPRPKVD 198
Query: 178 SSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTLGATFKQKKKVIELL 226
S+VI + E P V + + F R F+ + KTL K K EL+
Sbjct: 199 -SIVIRLERLEEPSVKVKNEKLFFEIVRHAFNMRRKTLWNATKNVKLPKELM 249
>gi|241888685|ref|ZP_04775992.1| dimethyladenosine transferase [Gemella haemolysans ATCC 10379]
gi|241864708|gb|EER69083.1| dimethyladenosine transferase [Gemella haemolysans ATCC 10379]
Length = 286
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 126/220 (57%), Gaps = 15/220 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + +L+ IV + +N + V+EIGPG G+LT L + +KKV + EID R
Sbjct: 19 FKKSLGQNFLIDANILNRIVDGAGVNGNVGVIEIGPGIGSLTEALAKKAKKVISFEIDGR 78
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFD----------LVVANIPYGISSPLVA 113
++ IL+ AD + + +I+ D LK + + +VVAN+PY I++P++
Sbjct: 79 LLPILSETLAD---YPNVEIINNDILKVDVDKIIAEKMSDCEKIMVVANLPYYITTPILT 135
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ T+ +++QKE A RL A G ++N L + + +VE++ V K+ F+P
Sbjct: 136 HLIENTEKIDGYVVMMQKEVANRLNAKVGTKDYNSLTILLNYYTNVEYLFTVPKKVFVPA 195
Query: 174 PKVDSSVVIIRPKAEIPDVNLD-EWRAFTRTCFSKKNKTL 212
P V+S+VV I K E + D ++ F R+CF ++ KTL
Sbjct: 196 PNVESAVVKIMTK-ETREFETDAKFFKFVRSCFVQRRKTL 234
>gi|157690824|ref|YP_001485286.1| dimethyladenosine transferase [Bacillus pumilus SAFR-032]
gi|166987691|sp|A8F909.1|RSMA_BACP2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|157679582|gb|ABV60726.1| dimethyladenosine transferase [Bacillus pumilus SAFR-032]
Length = 292
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 131/241 (54%), Gaps = 24/241 (9%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + +LD IV + + + V+EIGPG G LT +L + +KKV A EID+R
Sbjct: 22 FKKSLGQNFLIDTNILDRIVDHAEVTDETGVIEIGPGIGALTEQLAKRAKKVTAFEIDQR 81
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFD----------LVVANIPYGISSPLVA 113
++ ILN + +D + +I +D LK + + +VVAN+PY +++P++
Sbjct: 82 LLPILNDTLSP---YDNVTIIHQDVLKADVGKVIEENFADCKEVMVVANLPYYVTTPIIM 138
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
KL+ + ++LQKE A R+ A P E+N L++ V+ + + VM V K F+P
Sbjct: 139 KLLEENLPLKGIVVMLQKEVADRMAAIPSSKEYNSLSIAVQYYTEAKTVMVVPKTVFVPQ 198
Query: 174 PKVDSSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTLGATF-------KQKKKVI 223
P VDS+V+ + + E P V+++ F R F ++ KTL KQ K +I
Sbjct: 199 PNVDSAVIKLTVR-ETPAVSVENDEFFFQLIRASFGQRRKTLMNNLMNNLPDGKQHKAII 257
Query: 224 E 224
E
Sbjct: 258 E 258
>gi|153956353|ref|YP_001397118.1| dimethyladenosine transferase [Clostridium kluyveri DSM 555]
gi|219856668|ref|YP_002473790.1| hypothetical protein CKR_3325 [Clostridium kluyveri NBRC 12016]
gi|146349211|gb|EDK35747.1| KsgA [Clostridium kluyveri DSM 555]
gi|219570392|dbj|BAH08376.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 281
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 125/226 (55%), Gaps = 13/226 (5%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K+ GQ+ L + VL I+ + IN +D V+EIGPG G LT +LL+ +KKV AIE+D
Sbjct: 17 FSKNLGQNFLIDNSVLQDILEGTDINKNDFVIEIGPGVGTLTKELLKRAKKVCAIELDSD 76
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL------VVANIPYGISSPLVAKLVY 117
++ IL + +I KD LKT F + +VAN+PY I++P+++K++
Sbjct: 77 LIAILKEELKH---YPNFELIHKDVLKTNFNEIIKDESSIKIVANLPYYITTPIISKILN 133
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
+F++ T+++QKE R+++ P + L++ V+ DVE + VS F+P PKV+
Sbjct: 134 NKYNFKTLTIMIQKEVGERMISEPNCKRYGALSLLVQYYCDVEVLRKVSPYAFIPSPKVE 193
Query: 178 SSVVIIRPKAEIPDVNL---DEWRAFTRTCFSKKNKTLGATFKQKK 220
S+VI K P V + D + R F+ + KTL K K
Sbjct: 194 -SIVIKLTKLNNPRVKIKSEDLFFRIIRCSFNMRRKTLWNALKALK 238
>gi|295099321|emb|CBK88410.1| dimethyladenosine transferase [Eubacterium cylindroides T2-87]
Length = 289
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 131/247 (53%), Gaps = 22/247 (8%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+F KS GQ+ + RV++ I + + D+ V EIGPG G LT L S +V A EID
Sbjct: 20 VFTKKSYGQNFIIEPRVVEKIADAAIKSKDELVFEIGPGIGALTQYLTMKSNQVIAFEID 79
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEF---------PQFDLVVA-NIPYGISSPL 111
+R+ E+L +D L ++ KD LK + P +V A N+PY I++P+
Sbjct: 80 DRLPEVLENEIG----YDHLKIVLKDILKVDINEEIKKYRKPDQKIVFASNLPYYITTPI 135
Query: 112 VAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFL 171
+ KL T+ T+++QKE A R LAS D E+N L+V + D++ VMDVS+ F
Sbjct: 136 LFKLFEATEPIERITVMMQKEVADRFLASQNDKEYNALSVITQYRCDIKKVMDVSRHVFW 195
Query: 172 PCPKVDSSVV--IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTL----GATFKQKKKVIEL 225
P P VDS+V+ K + D L + + CF ++ KT+ FK K++ ++L
Sbjct: 196 PSPNVDSAVLQFTFHHKYNLKDEEL--FFKMVKACFVQRRKTIYNNFQTLFKDKEEALQL 253
Query: 226 LRLSKQK 232
L ++ K
Sbjct: 254 LEKAQLK 260
>gi|335047426|ref|ZP_08540447.1| dimethyladenosine transferase [Parvimonas sp. oral taxon 110 str.
F0139]
gi|333761234|gb|EGL38789.1| dimethyladenosine transferase [Parvimonas sp. oral taxon 110 str.
F0139]
Length = 253
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 117/194 (60%), Gaps = 12/194 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K+ GQ+ LT++ +L+ IV S+++ D V+EIGPG G LT LLE + KV +IEID R
Sbjct: 20 FSKNFGQNFLTDRNILEKIVEVSAVDKDYGVIEIGPGFGVLTKFLLEKAGKVVSIEIDTR 79
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFD---------LVVANIPYGISSPLVAK 114
+ E+L+ ++ +D + DALK +F + +VVAN+PY +++P++ K
Sbjct: 80 LKEVLDYTLSE---YDNFEFVQSDALKIDFKKLIEEKFTQKKIVVVANLPYYVTTPIITK 136
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
L+ S T+++QKE A+RL+A + + +++ VK AD +VS+ F+P P
Sbjct: 137 LLESDLDLESITIMVQKEVAQRLVADENSKDNSSISLFVKYYADANIAFNVSRNVFVPAP 196
Query: 175 KVDSSVVIIRPKAE 188
VDS+VV ++ K E
Sbjct: 197 NVDSAVVNMKLKKE 210
>gi|268323689|emb|CBH37277.1| Probable dimethyladenosine transferase [uncultured archaeon]
Length = 250
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 119/212 (56%), Gaps = 4/212 (1%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
+S GQ+ L + V +V +S+ +D VLEIG G G++T +L +K+V+A+E D+ +
Sbjct: 16 RSLGQYFLVDNDVAARMVEYASVGSEDLVLEIGAGLGSVTEELARKAKRVYAVEKDKELC 75
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSA 125
EIL + D ++ VI D +K E P+FD VVA+IPY +SSP+ KL+ +F A
Sbjct: 76 EILREQYVDK--KGKIEVIEADIMKLELPEFDKVVASIPYSLSSPITYKLL--LHNFELA 131
Query: 126 TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP 185
LL QKEFA+++ A P + RL+V + +AD+E + V + F P P V +++V
Sbjct: 132 VLLYQKEFAQKMTAEPRSHLYGRLSVIAQALADIEILEIVHRDAFCPSPPVKTAIVRFTE 191
Query: 186 KAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
K + + E+ F F + K + F+
Sbjct: 192 KKKRLVEDKREFIEFVSFAFGHRRKMMRHIFR 223
>gi|399576680|ref|ZP_10770435.1| dimethyladenosine transferase [Halogranum salarium B-1]
gi|399238124|gb|EJN59053.1| dimethyladenosine transferase [Halogranum salarium B-1]
Length = 298
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 115/212 (54%), Gaps = 15/212 (7%)
Query: 8 KGQHILTNQRVLDSIVRKSSINPDDT----VLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
+ QH L + RVLD R + PDD +LE+GPGTG LT +LL ++ V +E D R
Sbjct: 35 QDQHFLVDDRVLD---RVPTYLPDDADTSHILEVGPGTGALTDRLLALADHVTVVERDVR 91
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
+ + L R AD L ++ DAL+ + P F VAN+PYGISS + +L+ K
Sbjct: 92 LADFLRREFADDIEAGDLTILEGDALEVDLPDFTACVANLPYGISSEITFRLLPEGKPL- 150
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
L+ QKEFA R+ A + RL+V+ + AD+E V V F P P VDS+VV
Sbjct: 151 --VLMFQKEFAERMAAESATDAYGRLSVSAQHYADIEVVEPVPPTAFSPPPAVDSAVVRT 208
Query: 184 RPKAEIPDVNLDE---WRAFTRTCFSKKNKTL 212
P+ PD +D+ + F + F+++ KT+
Sbjct: 209 TPRD--PDYEVDDPEFFLDFVKALFTQRRKTI 238
>gi|75911082|ref|YP_325378.1| dimethyladenosine transferase [Anabaena variabilis ATCC 29413]
gi|122064280|sp|Q3M3F3.1|RSMA_ANAVT RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|75704807|gb|ABA24483.1| dimethyladenosine transferase [Anabaena variabilis ATCC 29413]
Length = 271
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/221 (37%), Positives = 124/221 (56%), Gaps = 21/221 (9%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
QH L +++ LD+IV+ + + +D +LEIGPGTG LT +LL + + + A+EID + ++L
Sbjct: 9 AQHWLKSEKALDAIVKAAECSTNDRILEIGPGTGILTRRLLPLVEALLAVEIDRDLCKLL 68
Query: 69 NRRAADSGFHDRLNVISKDALKTE-------FPQF---DLVVANIPYGISSPLVAKLVYG 118
++ G + ++ D L + FP+F + VVANIPY I+ P++ KL+ G
Sbjct: 69 VKQL---GQKENFLLLQGDFLTLDLVANLLTFPKFQKPNKVVANIPYNITGPIIEKLL-G 124
Query: 119 T------KSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
T + F S LL+QKE A RL A G F L+V V+ +AD EF+ DV F P
Sbjct: 125 TIANPNPEPFDSIVLLIQKEVAERLYAKAGSRTFGALSVRVQYLADCEFICDVPAGAFHP 184
Query: 173 CPKVDSSVVIIRPKA-EIPDVNLDEWRAFTRTCFSKKNKTL 212
PKVDS+VV +RP+ +IP + + F K K L
Sbjct: 185 PPKVDSAVVRLRPRQIQIPARDPKRLENLVKLGFGAKRKML 225
>gi|153854785|ref|ZP_01996019.1| hypothetical protein DORLON_02017 [Dorea longicatena DSM 13814]
gi|149752692|gb|EDM62623.1| dimethyladenosine transferase [Dorea longicatena DSM 13814]
Length = 292
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 122/225 (54%), Gaps = 14/225 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K GQ+ L + VLD I++ ++I DD VLEIGPG G +T L + + KV A+EID+
Sbjct: 23 FQKKFGQNFLIDTHVLDKIIQSANITEDDMVLEIGPGIGTMTQYLAQAAGKVIAVEIDKN 82
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFD---------LVVANIPYGISSPLVAK 114
++ IL SG+ D + VI++D LK + + VVAN+PY I++P++
Sbjct: 83 LIPILEDTL--SGY-DNVRVINEDVLKLDLKKLADEENNGKPVKVVANLPYYITTPIIMG 139
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
L S T+++QKE A R+ PG+ ++ L++ V+ AD V +V F+P P
Sbjct: 140 LFENEVPVESITVMVQKEVADRMQTGPGNKDYGALSLAVQYYADPYIVANVPPNCFMPRP 199
Query: 175 KVDSSVVIIRPKAEIPDVNLDEWRAFT--RTCFSKKNKTLGATFK 217
KV S+V+ + E P DE F R F+++ KTL K
Sbjct: 200 KVGSAVIRLTCHQEKPVQVQDEKLMFNIIRASFNQRRKTLANGLK 244
>gi|213967675|ref|ZP_03395822.1| dimethyladenosine transferase [Pseudomonas syringae pv. tomato T1]
gi|301382735|ref|ZP_07231153.1| dimethyladenosine transferase [Pseudomonas syringae pv. tomato
Max13]
gi|302063470|ref|ZP_07255011.1| dimethyladenosine transferase [Pseudomonas syringae pv. tomato K40]
gi|213927451|gb|EEB60999.1| dimethyladenosine transferase [Pseudomonas syringae pv. tomato T1]
Length = 268
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 118/226 (52%), Gaps = 14/226 (6%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
F H+++ GQ+ L + VLD I+R P+D +LEIGPG G LT LL ++ +E
Sbjct: 5 FQHRARKRFGQNFLHDAGVLDKILRAIRAKPEDRLLEIGPGQGALTEGLLNSGAQLDVVE 64
Query: 60 IDERMVEILNRRAADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLVA 113
+D+ ++ ILN + A N+ DALK +F P+ VV N+PY IS+PL+
Sbjct: 65 LDKDLIPILNSQFAS---QPNFNLHQGDALKFDFNTLGAEPRSLRVVGNLPYNISTPLIF 121
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ R +LQKE R+ A PG ++ RL++ V+ VE + +V F P
Sbjct: 122 HLLQNASLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPP 181
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P +P D R F+++ KTL T K
Sbjct: 182 PKVDSAIVRLVPYETLPHPAKDHRVLERVVREAFNQRRKTLRNTLK 227
>gi|383621692|ref|ZP_09948098.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halobiforma lacisalsi AJ5]
gi|448702544|ref|ZP_21699977.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halobiforma lacisalsi AJ5]
gi|445777105|gb|EMA28075.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halobiforma lacisalsi AJ5]
Length = 279
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 120/208 (57%), Gaps = 6/208 (2%)
Query: 8 KGQHILTNQRVLDSI-VRKSSINPD-DTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
+ QH L + RVLD + I+ + + +LEIG GTG LT +LL++ +V +E D +
Sbjct: 19 RDQHFLVDDRVLDRLPTYLEEIDAETNHLLEIGGGTGALTDRLLDLGDEVTVVERDPDLA 78
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSA 125
L AD+ + RL VI DAL+ + P F V+N+PYG+SS + +L+ R
Sbjct: 79 AFLREEFADAIDNGRLTVIEGDALEVDLPDFTASVSNLPYGVSSEITFRLL---PEGRPL 135
Query: 126 TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP 185
L+ Q+EFA R++A PG SE+ RL+V+ + ADVE V V K F P P V+S+VV P
Sbjct: 136 VLMFQQEFAERMVADPGTSEYGRLSVSTQHYADVELVETVPKEAFSPPPAVESAVVRAVP 195
Query: 186 KAEIPDV-NLDEWRAFTRTCFSKKNKTL 212
+ DV + D + F + F+++ KT+
Sbjct: 196 RDPEYDVADEDFFLRFVKALFTQRRKTI 223
>gi|429765068|ref|ZP_19297373.1| dimethyladenosine transferase [Clostridium celatum DSM 1785]
gi|429187013|gb|EKY27935.1| dimethyladenosine transferase [Clostridium celatum DSM 1785]
Length = 281
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 126/218 (57%), Gaps = 13/218 (5%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + V IV + +N +D V+EIGPG G LT++LL+ +KKV AIE+D
Sbjct: 19 FSKSLGQNFLVDDSVPRDIVLGAEVNEEDLVIEIGPGVGTLTVQLLKKAKKVVAIELDND 78
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFD------LVVANIPYGISSPLVAKLVY 117
++ IL + + G + +I DALK +F + +VAN+PY +++P++ KL+
Sbjct: 79 LIPILTQ---ELGENPNFTLIHNDALKVDFNEIIGEEKSVKLVANLPYYVTTPIIVKLLK 135
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
+F+S T+++QKE A R+ A PG+ ++ L++ V+ + V V F+P PKVD
Sbjct: 136 DGYNFKSLTIMIQKEVAERMNAEPGNKDYGALSLLVQYYCNTSIVRKVPPTCFIPRPKVD 195
Query: 178 SSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTL 212
S+VI K + P V + + F R F+ + KTL
Sbjct: 196 -SIVIRLDKLDKPRVQVQNEKLFFDIIRNSFNMRRKTL 232
>gi|332982498|ref|YP_004463939.1| dimethyladenosine transferase [Mahella australiensis 50-1 BON]
gi|332700176|gb|AEE97117.1| dimethyladenosine transferase [Mahella australiensis 50-1 BON]
Length = 299
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 131/223 (58%), Gaps = 16/223 (7%)
Query: 5 HKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERM 64
+K+ GQ+ L N+ L++IV + I+ +D VLEIGPG G LTLKL E + V A+E+D+R+
Sbjct: 25 NKAMGQNFLINKEALNAIVNGADISAEDEVLEIGPGLGTLTLKLSERAAHVTAVEVDKRI 84
Query: 65 VEILNRRAADSGF-----HDRLNVISKDALKTEFP-QFDLVVANIPYGISSPLVAKLVYG 118
+ +L + D G D LN + + +K + +VVAN+PY I++P++ ++
Sbjct: 85 IPLLKQTLQDVGNVSIIEGDFLNPMVAEEIKECLAGKSAIVVANLPYYITTPVLMDIIEN 144
Query: 119 TKSFRSATLLLQKEFARRLLASPGD------SEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
+ A L++QKE A R++A PG ++ L+++V+ D + +++V + DFLP
Sbjct: 145 YIMIKRAVLMMQKEVAYRVVAQPGSRLSGSVKDYGVLSISVQYYMDPQILLEVPRSDFLP 204
Query: 173 CPKVDSSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTL 212
P VDS+VV + + + P V++ + R F + F ++ KTL
Sbjct: 205 SPDVDSAVVRLD-RRDKPAVDVQDERMFFSLVKAAFGQRRKTL 246
>gi|282899539|ref|ZP_06307503.1| 16S rRNA dimethylase [Cylindrospermopsis raciborskii CS-505]
gi|281195418|gb|EFA70351.1| 16S rRNA dimethylase [Cylindrospermopsis raciborskii CS-505]
Length = 281
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 114/198 (57%), Gaps = 20/198 (10%)
Query: 5 HKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERM 64
K QH L +++ L+SIV+ + +D +LEIGPGTG LT +LL + + A+EID +
Sbjct: 5 QKQFAQHWLRSEKALNSIVKAAECQVNDRILEIGPGTGILTKRLLPLVDSLLAVEIDRDL 64
Query: 65 VEILNRRAADSGFHDRLNVISKDALK-------TEFPQF---DLVVANIPYGISSPLVAK 114
E+L ++ G + ++ D L T FP+F + VVANIPY I+ P++ K
Sbjct: 65 CELLAKKL---GARENFLLLQGDFLTLGIASQLTAFPKFQRQNKVVANIPYNITGPIIEK 121
Query: 115 LVYGT------KSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKR 168
L+ GT + F S LL+QKE A+RL A PG F L+V V+ +A+ EF+ V
Sbjct: 122 LL-GTIADPNPQPFDSIVLLIQKEVAQRLYAKPGSRNFGALSVRVQYLAECEFICTVPAS 180
Query: 169 DFLPCPKVDSSVVIIRPK 186
F P PKVDS+VV + P+
Sbjct: 181 AFYPPPKVDSAVVRLLPR 198
>gi|194017982|ref|ZP_03056589.1| dimethyladenosine transferase [Bacillus pumilus ATCC 7061]
gi|194010319|gb|EDW19894.1| dimethyladenosine transferase [Bacillus pumilus ATCC 7061]
Length = 292
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 131/241 (54%), Gaps = 24/241 (9%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + +LD IV + + + V+EIGPG G LT +L + +KKV A EID+R
Sbjct: 22 FKKSLGQNFLIDTNILDRIVDHAEVTDETGVIEIGPGIGALTEQLAKRAKKVTAFEIDQR 81
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFD----------LVVANIPYGISSPLVA 113
++ ILN + +D + +I +D LK + + +VVAN+PY +++P++
Sbjct: 82 LLPILNDTLSP---YDNVTIIHQDVLKADVGKVIEENFADCKEVMVVANLPYYVTTPIIM 138
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
KL+ + ++LQKE A R+ A P E+N L++ V+ + + VM V K F+P
Sbjct: 139 KLLEENLPLKGIVVMLQKEVADRMAAVPSSKEYNSLSIAVQYYTEAKTVMVVPKTVFVPQ 198
Query: 174 PKVDSSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTLGATF-------KQKKKVI 223
P VDS+V+ + + E P V+++ F R F ++ KTL KQ K +I
Sbjct: 199 PNVDSAVIKLTVR-ETPAVSVENDEFFFQLIRASFGQRRKTLMNNLMNNLPDGKQHKVII 257
Query: 224 E 224
E
Sbjct: 258 E 258
>gi|84490322|ref|YP_448554.1| dimethyladenosine transferase [Methanosphaera stadtmanae DSM 3091]
gi|119365032|sp|Q2NE42.1|RSMA_METST RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|84373641|gb|ABC57911.1| KsgA [Methanosphaera stadtmanae DSM 3091]
Length = 271
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 120/205 (58%), Gaps = 7/205 (3%)
Query: 7 SKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVE 66
+K Q+ L + L+ I+ + I ++T+LEIG G G LTL + + +KKV AIE D +V+
Sbjct: 18 NKSQNYLIDDNKLNIILENADIQDNETILEIGAGIGTLTLPMAKKAKKVIAIEKDPIIVD 77
Query: 67 ILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSAT 126
IL ++ + + +I DALK +FP+FD VV+N+PY ISSP+ KL+ F+ A
Sbjct: 78 ILKQQIIKEKLTN-IEIIKDDALKVDFPKFDKVVSNLPYQISSPVTFKLL--EYPFKKAI 134
Query: 127 LLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPK 186
L+ Q EFA+R+ A P E++RL+V + AD + + + F+P PK+ S+V+ + PK
Sbjct: 135 LMYQLEFAKRMQAKPDTHEYSRLSVALSYRADTKIIDTLPPEAFIPKPKIKSAVIELIPK 194
Query: 187 AEIP-DVNLDEWRAFTRTCFSKKNK 210
P D LD R F +NK
Sbjct: 195 NNKPIDKLLDNT---IRALFQHRNK 216
>gi|227824447|ref|ZP_03989279.1| dimethyladenosine transferase [Acidaminococcus sp. D21]
gi|352684421|ref|YP_004896406.1| dimethyladenosine transferase [Acidaminococcus intestini RyC-MR95]
gi|226904946|gb|EEH90864.1| dimethyladenosine transferase [Acidaminococcus sp. D21]
gi|350279076|gb|AEQ22266.1| dimethyladenosine transferase [Acidaminococcus intestini RyC-MR95]
Length = 287
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 114/216 (52%), Gaps = 11/216 (5%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQ+ L N+ V+ I K+ I P D VLE+GPG G LT L E V ++EIDE ++ IL
Sbjct: 34 GQNFLINESVVRGIAEKAKIGPGDLVLEVGPGIGTLTQALAETGANVKSVEIDESLLPIL 93
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFD-----LVVANIPYGISSPLVAKLVYGTKSFR 123
R G+ D + +I D LK + V AN+PY I++P++ L+ +
Sbjct: 94 --RKTLEGY-DNVEIIHGDILKVDLKDITGGKPFTVAANLPYYITTPIIFSLLEANLPLK 150
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+++QKE A R+ A PG + L++ ++ ++ + + V DF+P PKVDS VV+
Sbjct: 151 RIVVMVQKEVAERMAARPGTKAYGPLSLALQYYSEPQLAIPVPAHDFMPAPKVDSMVVVC 210
Query: 184 RPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
K E P VN+D + R FS++ K L K
Sbjct: 211 E-KRESPIVNVDASLYVKVVRAAFSQRRKMLRTCLK 245
>gi|389805962|ref|ZP_10203105.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Rhodanobacter thiooxydans LCS2]
gi|388446416|gb|EIM02449.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Rhodanobacter thiooxydans LCS2]
Length = 262
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 119/224 (53%), Gaps = 15/224 (6%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS GQH L ++R +D IV + P+D ++EIGPG G LTL LL + ++ AIE+D ++
Sbjct: 7 KSFGQHFLHDRRYIDRIVSAIAPRPEDFMVEIGPGEGALTLPLLAAAGRLTAIELDTDLI 66
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEF---------PQFDLVVANIPYGISSPLVAKLV 116
L RAA G L+VI D LK +F PQ + N+PY ISSP++ V
Sbjct: 67 PDLRSRAATVG---ELHVIHADVLKVDFSALAHSHGAPQLR-IAGNLPYYISSPILFHCV 122
Query: 117 YGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKV 176
+ R +LQKE R+ A PG + RL+V ++L VE + DV F P PKV
Sbjct: 123 EHAAAIRDMHFMLQKEVVERMAAEPGSKVYGRLSVMLQLACRVEPLFDVPPEAFRPPPKV 182
Query: 177 DSSVV--IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
+S+VV + P E+ D + A + F ++ KTL +Q
Sbjct: 183 ESAVVRLVPLPVGELHDAPPEHVHAVVKAAFGQRRKTLANALRQ 226
>gi|15790240|ref|NP_280064.1| dimethyladenosine transferase [Halobacterium sp. NRC-1]
gi|169235969|ref|YP_001689169.1| dimethyladenosine transferase [Halobacterium salinarum R1]
gi|27151602|sp|Q9HQH1.1|RSMA_HALSA RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|226732584|sp|B0R506.1|RSMA_HALS3 RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|10580702|gb|AAG19544.1| dimethyladenosine transferase [Halobacterium sp. NRC-1]
gi|167727035|emb|CAP13821.1| probable dimethyladenosine transferase [Halobacterium salinarum R1]
Length = 282
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 114/205 (55%), Gaps = 8/205 (3%)
Query: 10 QHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILN 69
QH L + RVLD I + VLEIG GTG LT +LL V+ +V A+E DE L
Sbjct: 23 QHFLIDDRVLDRIPTYADGFDRGHVLEIGAGTGALTDRLLSVADRVTAVERDESYASFLR 82
Query: 70 RRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLL 129
AD+ L+V++ DAL + P F V+N+PYG++S + +L+ K L+
Sbjct: 83 EEFADAIAAGDLDVVAGDALAVDLPAFTCAVSNLPYGVASEVTFRLLPAGKPM---VLMY 139
Query: 130 QKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAEI 189
Q EFA R+ A PG SE+ RL+V + ADV V V F P P+V+S+VV + P+
Sbjct: 140 QLEFAERMAADPGTSEYGRLSVATQHYADVSIVETVPAAAFDPQPRVESAVVRVTPRD-- 197
Query: 190 PD-VNLDE--WRAFTRTCFSKKNKT 211
PD V DE + +F + F+++ KT
Sbjct: 198 PDYVVADEAFFLSFVKALFTQRRKT 222
>gi|302669432|ref|YP_003829392.1| dimethyladenosine transferase KsgA [Butyrivibrio proteoclasticus
B316]
gi|302393905|gb|ADL32810.1| dimethyladenosine transferase KsgA [Butyrivibrio proteoclasticus
B316]
Length = 292
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 120/215 (55%), Gaps = 14/215 (6%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQ+ L + VLD IV + + DD VLEIGPG G+LT L E + KV A+EID+ ++ +L
Sbjct: 26 GQNFLIDSGVLDGIVSAAGVTKDDCVLEIGPGIGSLTQYLAESAGKVVAVEIDKTLIPVL 85
Query: 69 NRRAADSGFHDRLNVISKDALKTEFP----QFDL-----VVANIPYGISSPLVAKLVYGT 119
++ +D + VI++D LK + +++ VVAN+PY I++P++ KL
Sbjct: 86 ADTLSE---YDNVTVINEDVLKVDIEAIVKEYNGGNPIKVVANLPYYITTPIIMKLFESG 142
Query: 120 KSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSS 179
S T+++QKE A R+ PG+ ++ L++ V A VMDV F+P P V S+
Sbjct: 143 APIESITVMVQKEVADRMAMGPGNKDYGSLSLAVGYYAKASEVMDVPPSSFIPQPGVGSA 202
Query: 180 VVIIRPKAEIPDVNLDEWRAF--TRTCFSKKNKTL 212
VV + +E DE F RT F+++ KTL
Sbjct: 203 VVKLTRYSEPAVCVQDEKYMFEIIRTSFNQRRKTL 237
>gi|374260482|ref|ZP_09619079.1| dimethyladenosine transferase [Legionella drancourtii LLAP12]
gi|363539063|gb|EHL32460.1| dimethyladenosine transferase [Legionella drancourtii LLAP12]
Length = 256
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 124/231 (53%), Gaps = 12/231 (5%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINP--DDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
K GQ+ L ++ V+D I+R SINP +D +LEIGPG G LT LL K++ AIEID
Sbjct: 7 KRFGQNFLQSRHVIDDILR--SINPQLEDNLLEIGPGLGALTEPLLRRLKRMTAIEIDTD 64
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL---VVANIPYGISSPLVAKLVYGTK 120
+ + L+ G +LN+I+ DAL ++ QF V+ N+PY IS+PL+ L+
Sbjct: 65 LQKYLSELPIAQG---KLNLIAADALTVDYSQFGAKLRVIGNLPYNISTPLLIHLLRFAP 121
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
+LQKE R+ A PG ++ RL V ++ DV+++ V F P PKVDS+V
Sbjct: 122 FIEDMHFMLQKEVVERMAAQPGTKDYGRLTVMLQYHCDVDYLFAVPPEAFEPRPKVDSAV 181
Query: 181 VIIRPKAEIP--DVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLS 229
V + P + P V +++ + F+ + KTL K +LL L
Sbjct: 182 VRLVPYEKSPFESVAVEQLERLVASAFAMRRKTLNNNLKGIISAEQLLDLG 232
>gi|116070730|ref|ZP_01467999.1| 16S rRNA dimethylase [Synechococcus sp. BL107]
gi|116066135|gb|EAU71892.1| 16S rRNA dimethylase [Synechococcus sp. BL107]
Length = 274
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 107/188 (56%), Gaps = 14/188 (7%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLL-EVSKKVHAIEIDERMVEI 67
GQH L + RVLD IV + + DD VLE+GPG G LT +LL + ++HAIE+D +V+
Sbjct: 13 GQHWLRDARVLDQIVSAARLQQDDRVLEVGPGRGALTERLLASAAAQIHAIELDRDLVQG 72
Query: 68 LNRRAADSGFHDRLNVISKDALKTEFPQFDL-----VVANIPYGISSPLVAKLVYG---- 118
L+ R G R ++ D L D VVANIPY I+ PL+A+L+
Sbjct: 73 LHDR---FGAQSRFSLREGDVLDAPLHLGDGGFANKVVANIPYNITGPLLARLIGRLDRP 129
Query: 119 -TKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
++ LLLQKE A R+ A PG S F+ L+V ++L+AD V V R F P PKV
Sbjct: 130 VEPTYDCLVLLLQKEVAERIRAQPGRSSFSALSVRMQLLADCSLVCPVPPRCFQPPPKVQ 189
Query: 178 SSVVIIRP 185
S V++++P
Sbjct: 190 SEVILLKP 197
>gi|423399639|ref|ZP_17376812.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG2X1-2]
gi|423461696|ref|ZP_17438492.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG5X2-1]
gi|423480183|ref|ZP_17456895.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG6X1-1]
gi|401135358|gb|EJQ42957.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG5X2-1]
gi|401658245|gb|EJS75742.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG2X1-2]
gi|402423686|gb|EJV55892.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG6X1-1]
Length = 292
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 124/220 (56%), Gaps = 15/220 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + VL+ IV + I + +EIGPG G LT +L + +KKV A EID+R
Sbjct: 21 FKKSLGQNFLIDTNVLNRIVDHAEIGSESGAIEIGPGIGALTEQLAKRAKKVVAFEIDQR 80
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEF-----PQFD-----LVVANIPYGISSPLVA 113
++ IL+ A + + VI+KD LK + QF+ +VVAN+PY I++P++
Sbjct: 81 LLPILDETLAP---YSNVTVINKDVLKADVHEVFSEQFEEGQDVMVVANLPYYITTPILF 137
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
KL+ R +++QKE RL A PG E+ L++ ++ +VE VM V + F+P
Sbjct: 138 KLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVFVPQ 197
Query: 174 PKVDSSVV--IIRPKAEIPDVNLDEWRAFTRTCFSKKNKT 211
P VDS+++ + RPK + + + R F+++ KT
Sbjct: 198 PNVDSAIIRLLKRPKPVVEVTDETFFFEVVRASFAQRRKT 237
>gi|310657782|ref|YP_003935503.1| Dimethyladenosine transferase (S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase) (16S rRNA
dimethylase) (High level kasugamycin resistance protein
ksgA) (Kasugamycin dimethyltransferase) [[Clostridium]
sticklandii]
gi|308824560|emb|CBH20598.1| Dimethyladenosine transferase (S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase) (16S rRNA
dimethylase) (High level kasugamycin resistance protein
ksgA) (Kasugamycin dimethyltransferase) [[Clostridium]
sticklandii]
Length = 289
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 125/220 (56%), Gaps = 14/220 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L ++ VL IV + I+ +DTV+EIGPG G LT +L +K+V +IEID+
Sbjct: 21 FTKSLGQNFLVDEHVLSQIVDSAEIDSEDTVIEIGPGIGTLTRELSYRAKQVISIEIDKN 80
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQF---------DLVVANIPYGISSPLVAK 114
++ IL+ AD D + +I++D LKT+ + VVAN+PY I++P++ +
Sbjct: 81 LIPILSETLAD---RDNIKIINQDILKTDLHELVNEFSPDRKVKVVANLPYYITTPIIMR 137
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
+ ++ +++QKE A R+ A P ++ L+V V+ D + V K F+P P
Sbjct: 138 FLEEKVPLKTMVIMIQKEVANRINAVPSTKDYGSLSVAVQYYCDTDIVAKAPKGAFIPEP 197
Query: 175 KVDSSVVIIRPKAE--IPDVNLDEWRAFTRTCFSKKNKTL 212
VDS+V+ + K + I ++ D + + FSK+ KTL
Sbjct: 198 GVDSAVIKLEVKEDKGIELIDEDLFFEVVKAAFSKRRKTL 237
>gi|423513025|ref|ZP_17489555.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HuA2-1]
gi|402446373|gb|EJV78233.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HuA2-1]
Length = 292
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 124/220 (56%), Gaps = 15/220 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + VL+ IV + I + +EIGPG G LT +L + +KKV A EID+R
Sbjct: 21 FKKSLGQNFLIDTNVLNRIVDHAEIGSESGAIEIGPGIGALTEQLAKRAKKVVAFEIDQR 80
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEF-----PQFD-----LVVANIPYGISSPLVA 113
++ IL+ A + + VI+KD LK + QF+ +VVAN+PY I++P++
Sbjct: 81 LLPILDETLAP---YSNVTVINKDVLKADVHEVFSEQFEEGQDVMVVANLPYYITTPILF 137
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
KL+ R +++QKE RL A PG E+ L++ ++ +VE VM V + F+P
Sbjct: 138 KLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVFVPQ 197
Query: 174 PKVDSSVV--IIRPKAEIPDVNLDEWRAFTRTCFSKKNKT 211
P VDS+++ + RPK + + + R F+++ KT
Sbjct: 198 PNVDSAIIRLLKRPKPVVEVTDETFFFEVVRASFAQRRKT 237
>gi|163938049|ref|YP_001642933.1| dimethyladenosine transferase [Bacillus weihenstephanensis KBAB4]
gi|423370770|ref|ZP_17348174.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD142]
gi|423456672|ref|ZP_17433522.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG5X1-1]
gi|423471689|ref|ZP_17448433.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG6O-2]
gi|423490656|ref|ZP_17467338.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BtB2-4]
gi|423496396|ref|ZP_17473040.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
CER057]
gi|423496810|ref|ZP_17473427.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
CER074]
gi|423520181|ref|ZP_17496662.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HuA2-4]
gi|423520654|ref|ZP_17497127.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HuA4-10]
gi|423556962|ref|ZP_17533265.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
MC67]
gi|423595318|ref|ZP_17571348.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD048]
gi|423597235|ref|ZP_17573235.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD078]
gi|423659640|ref|ZP_17634809.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VDM022]
gi|423671072|ref|ZP_17646101.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VDM034]
gi|423672705|ref|ZP_17647644.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VDM062]
gi|226729756|sp|A9VN54.1|RSMA_BACWK RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|163860246|gb|ABY41305.1| dimethyladenosine transferase [Bacillus weihenstephanensis KBAB4]
gi|401073357|gb|EJP81782.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD142]
gi|401128419|gb|EJQ36109.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG5X1-1]
gi|401149126|gb|EJQ56605.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
CER057]
gi|401155446|gb|EJQ62856.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HuA2-4]
gi|401163991|gb|EJQ71331.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
CER074]
gi|401180550|gb|EJQ87708.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HuA4-10]
gi|401194041|gb|EJR01038.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
MC67]
gi|401222244|gb|EJR28841.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD048]
gi|401239576|gb|EJR46001.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD078]
gi|401293903|gb|EJR99536.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VDM034]
gi|401304659|gb|EJS10209.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VDM022]
gi|401311437|gb|EJS16738.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VDM062]
gi|402429001|gb|EJV61092.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BtB2-4]
gi|402430787|gb|EJV62861.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG6O-2]
Length = 292
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 124/220 (56%), Gaps = 15/220 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + VL+ IV + I + +EIGPG G LT +L + +KKV A EID+R
Sbjct: 21 FKKSLGQNFLIDTNVLNRIVDHAEIGSESGAIEIGPGIGALTEQLAKRAKKVVAFEIDQR 80
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEF-----PQFD-----LVVANIPYGISSPLVA 113
++ IL+ A + + VI+KD LK + QF+ +VVAN+PY I++P++
Sbjct: 81 LLPILDETLAP---YSNVTVINKDVLKADVHEVFSEQFEEGQDVMVVANLPYYITTPILF 137
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
KL+ R +++QKE RL A PG E+ L++ ++ +VE VM V + F+P
Sbjct: 138 KLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVFVPQ 197
Query: 174 PKVDSSVV--IIRPKAEIPDVNLDEWRAFTRTCFSKKNKT 211
P VDS+++ + RPK + + + R F+++ KT
Sbjct: 198 PNVDSAIIRLLKRPKPVVEVTDETFFFEVVRASFAQRRKT 237
>gi|403253630|ref|ZP_10919931.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Thermotoga sp. EMP]
gi|418045493|ref|ZP_12683588.1| Ribosomal RNA small subunit methyltransferase A [Thermotoga
maritima MSB8]
gi|351676378|gb|EHA59531.1| Ribosomal RNA small subunit methyltransferase A [Thermotoga
maritima MSB8]
gi|402811164|gb|EJX25652.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Thermotoga sp. EMP]
Length = 260
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 131/229 (57%), Gaps = 8/229 (3%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
K GQ L++ R+ IV+ + + P+D V+EIG G G LT +L + +V A EIDE
Sbjct: 14 LKKHLGQVFLSDDRIAKRIVKAAELTPEDVVVEIGAGAGTLTEELAKTGARVIAYEIDES 73
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTE-FPQFDLVVANIPYGISSPLVAKLVYGTKSF 122
+ IL R + + + + +D LK + P+ + V+NIPY I+ PL+ K++ F
Sbjct: 74 LAPILQERLSK---YPNVELRFEDFLKAKNVPEGAICVSNIPYNITGPLMEKII--EWKF 128
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
+ A +++QKE R+LA PG + L+V V+ +V+ + DVS+ F+P P+VDS+VV
Sbjct: 129 KRAIVMIQKEVGERILAKPGKKTYGYLSVVVQTFYEVKKLFDVSRSCFVPNPEVDSTVVD 188
Query: 183 IRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLSKQ 231
++ K D++ ++++ F F+KK KTL + + E + LS++
Sbjct: 189 LKRKP--VDLDFEKFKKFVSMIFAKKRKTLKNNLRPFLSIFEGVDLSRR 235
>gi|392958417|ref|ZP_10323929.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus macauensis ZFHKF-1]
gi|391875587|gb|EIT84195.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus macauensis ZFHKF-1]
Length = 291
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 122/220 (55%), Gaps = 15/220 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L ++ +L +IV ++++ + +EIGPG G LT + +KKV A EID+R
Sbjct: 21 FKKSLGQNFLIDRNILSNIVAQANLTEESGAIEIGPGIGALTEFIAREAKKVVAFEIDQR 80
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKT--------EFPQFD--LVVANIPYGISSPLVA 113
++ IL A + +VI D L+ EF + +VVAN+PY +++P++
Sbjct: 81 LLPILKETLAP---YPHASVIHSDILEADVHEVITREFQGIEDIMVVANLPYYVTTPIIM 137
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
KL+ R ++QKE A RL A PG E+N L++ ++ A+ E VM V K F+P
Sbjct: 138 KLLTEKLPIRGIVCMIQKEVADRLAAKPGTKEYNSLSIAIQYYAEAETVMKVPKTVFVPA 197
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKT 211
P VDS+V+ + + E P DE + A R F ++ KT
Sbjct: 198 PNVDSAVIRLTIRKEPPISVKDETFFFALIRASFGQRRKT 237
>gi|166031341|ref|ZP_02234170.1| hypothetical protein DORFOR_01028 [Dorea formicigenerans ATCC
27755]
gi|346307325|ref|ZP_08849463.1| ribosomal RNA small subunit methyltransferase A [Dorea
formicigenerans 4_6_53AFAA]
gi|166028746|gb|EDR47503.1| dimethyladenosine transferase [Dorea formicigenerans ATCC 27755]
gi|345906158|gb|EGX75888.1| ribosomal RNA small subunit methyltransferase A [Dorea
formicigenerans 4_6_53AFAA]
Length = 292
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 122/230 (53%), Gaps = 14/230 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K GQ+ L + VL+ I+ + I DD VLEIGPG G +T L E + KV A+EID+
Sbjct: 23 FQKKFGQNFLIDTHVLEKIISAAGITKDDMVLEIGPGIGTMTQYLAEAAGKVAAVEIDKN 82
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL---------VVANIPYGISSPLVAK 114
++ IL ++ +D + VI+ D LK + VVAN+PY I++P++
Sbjct: 83 LIPILEDTLSE---YDNVMVINDDVLKVDIRGLVEKENGGRPVKVVANLPYYITTPIIMG 139
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
L G S T+++QKE A R+ PG+ ++ L++ V+ AD V +V F+P P
Sbjct: 140 LFEGNVPVESITVMVQKEVADRMQTGPGNKDYGALSLAVQYYADPYIVANVPPNCFMPRP 199
Query: 175 KVDSSVVIIRPKAEIP-DVNLDEWR-AFTRTCFSKKNKTLGATFKQKKKV 222
KV S+V+ + A P V+ ++W R F+++ KTL K+
Sbjct: 200 KVGSAVIRLTRHAAPPVKVDNEKWMFDIIRASFNQRRKTLANGLSNSDKI 249
>gi|282896422|ref|ZP_06304443.1| 16S rRNA dimethylase [Raphidiopsis brookii D9]
gi|281198710|gb|EFA73590.1| 16S rRNA dimethylase [Raphidiopsis brookii D9]
Length = 281
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 113/198 (57%), Gaps = 20/198 (10%)
Query: 5 HKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERM 64
K QH L +++ L+SIV+ + +D +LEIGPGTG LT +LL + + A+EID +
Sbjct: 5 QKQFAQHWLRSEKALNSIVKAAECQANDRILEIGPGTGILTKRLLPLVDSLLAVEIDRDL 64
Query: 65 VEILNRRAADSGFHDRLNVISKDALK-------TEFPQF---DLVVANIPYGISSPLVAK 114
E+L ++ G + ++ D L T FP+F + VVANIPY I+ P++ K
Sbjct: 65 CELLAKKL---GARENFLLLQGDFLTLGIASQLTAFPKFQRQNKVVANIPYNITGPIIEK 121
Query: 115 LVYGT------KSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKR 168
L+ GT + F S LL+QKE A+RL A PG F L+V V+ +A+ EF+ V
Sbjct: 122 LL-GTIADPNPQPFDSIVLLIQKEVAQRLYAKPGSRNFGALSVRVQYLAECEFICTVPAS 180
Query: 169 DFLPCPKVDSSVVIIRPK 186
F P PKVDS VV + P+
Sbjct: 181 AFYPPPKVDSVVVRLLPR 198
>gi|336122175|ref|YP_004576950.1| ribosomal RNA small subunit methyltransferase A
[Methanothermococcus okinawensis IH1]
gi|334856696|gb|AEH07172.1| Ribosomal RNA small subunit methyltransferase A
[Methanothermococcus okinawensis IH1]
Length = 279
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 119/212 (56%), Gaps = 10/212 (4%)
Query: 5 HKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERM 64
+K GQ L ++ ++ V + IN +D VLEIG G G LT +L + +KKV+ IE+D R+
Sbjct: 11 NKKLGQCFLKDKNIVKKAVNAADINKNDIVLEIGLGKGILTKELAKNAKKVYVIELDMRL 70
Query: 65 VEILNRRAADSGFHDRLNVISKDALKTEFPQ--FDLVVANIPYGISSPLVAKLVYGTKSF 122
A+ + + +I DALK + F+ +VAN+PY ISSP+ K + K F
Sbjct: 71 EPFAEEVIAE---YPNVEIIWNDALKVNLDELNFNKIVANLPYQISSPITFKFL--KKDF 125
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
A L+ Q EFA+R++A G E+ RL+V+V+ A+V+FV VS F P PKVDS++V
Sbjct: 126 DVAVLMYQYEFAKRMIAKEGTKEYGRLSVSVQYYANVQFVCKVSPSAFSPKPKVDSAIVK 185
Query: 183 IRPKAEIPDVNLDEWRAF---TRTCFSKKNKT 211
I K L++ F R F KNKT
Sbjct: 186 ITKKEPNELYYLEDKEFFENVVRALFQHKNKT 217
>gi|315654032|ref|ZP_07906948.1| dimethyladenosine transferase [Lactobacillus iners ATCC 55195]
gi|349611934|ref|ZP_08891164.1| ribosomal RNA small subunit methyltransferase A [Lactobacillus sp.
7_1_47FAA]
gi|315488728|gb|EFU78374.1| dimethyladenosine transferase [Lactobacillus iners ATCC 55195]
gi|348608399|gb|EGY58384.1| ribosomal RNA small subunit methyltransferase A [Lactobacillus sp.
7_1_47FAA]
Length = 295
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 125/227 (55%), Gaps = 15/227 (6%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS GQ+ L + ++ IV + + V+EIGPG G+LT +LL KV A E+D +
Sbjct: 26 KSLGQNFLVDLPIVKKIVASAGVVEGSQVIEIGPGIGSLTEQLLLAGAKVLAYEVDPDLP 85
Query: 66 EIL-NRRAADSG---FHDRLNVISKDALKTEFPQ-----FD-----LVVANIPYGISSPL 111
+IL N A G +DR +I KD LK +F FD +VVAN+PY I++P+
Sbjct: 86 DILYNELPAQIGNYELNDRFRIIMKDILKADFATDIADYFDVNRPIIVVANLPYYITTPI 145
Query: 112 VAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFL 171
+ KL++ TL++QKE A R+ AS + L + VK DV+F +V + F+
Sbjct: 146 ILKLMHSPVKISQLTLMMQKEVAERISASHKSKAYGPLTIAVKKDMDVDFAFEVKRTSFM 205
Query: 172 PCPKVDSSVVIIRP-KAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
P PKVDS+VV+++P + ++ + D + + FS++ KTL K
Sbjct: 206 PSPKVDSAVVVLKPLEHKLLIEHEDLFNQIVKLAFSQRRKTLNNNLK 252
>gi|366054192|ref|ZP_09451914.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Lactobacillus suebicus KCTC 3549]
Length = 298
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 125/226 (55%), Gaps = 17/226 (7%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS GQ+ LT+ VL IV + + P+D V+EIGPG G LT +L + +V A+E+D ++
Sbjct: 26 KSLGQNFLTDLNVLSKIVSAADVGPEDNVIEIGPGIGALTEQLALAAGQVVALEVDTSLL 85
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFP-----QFD------LVVANIPYGISSPLVAK 114
+L+ G +D + VI++D L + +FD VVAN+PY I++P++ +
Sbjct: 86 PVLDEVL---GEYDNVKVINQDVLDVDIAALIDREFDDPSKPVKVVANLPYYITTPILLQ 142
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
L+ + ++LQKE A+RL A+PG + L++ V+ D E +V + F+P P
Sbjct: 143 LLNTEVKWSKIVVMLQKEVAQRLAANPGTKAYGTLSLTVQYKMDAELAFEVPRTVFVPSP 202
Query: 175 KVDSSVVIIRPKAEIPDVNLDEWRAFTR---TCFSKKNKTLGATFK 217
VDS++V + P+ + V D+ + R CFS + KTL +
Sbjct: 203 NVDSAIVSLEPRKKELAVKPDDEKLLFRLIKGCFSHRRKTLSNNLQ 248
>gi|423399550|ref|ZP_17376746.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG2X1-1]
gi|423410242|ref|ZP_17387389.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG2X1-3]
gi|401643606|gb|EJS61302.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG2X1-1]
gi|401649051|gb|EJS66641.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG2X1-3]
Length = 292
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 124/220 (56%), Gaps = 15/220 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + VL+ IV + I + +EIGPG G LT +L + +KKV A EID+R
Sbjct: 21 FKKSLGQNFLIDTNVLNRIVDHADIGSESGAIEIGPGIGALTEQLAKRAKKVVAFEIDQR 80
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEF-----PQFD-----LVVANIPYGISSPLVA 113
++ IL+ A + + VI+KD LK + QF+ +VVAN+PY I++P++
Sbjct: 81 LLPILDETLAP---YSNVTVINKDVLKADVHEVFSEQFEEGQDVMVVANLPYYITTPILF 137
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
KL+ R +++QKE RL A PG E+ L++ ++ +VE VM V + F+P
Sbjct: 138 KLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVFVPQ 197
Query: 174 PKVDSSVV--IIRPKAEIPDVNLDEWRAFTRTCFSKKNKT 211
P VDS+++ + RPK + + + R F+++ KT
Sbjct: 198 PNVDSAIIRLLKRPKPVVEVTDETFFFEVVRASFAQRRKT 237
>gi|423485293|ref|ZP_17461980.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG6X1-2]
gi|401135870|gb|EJQ43466.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG6X1-2]
Length = 292
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 124/220 (56%), Gaps = 15/220 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + VL+ IV + I + +EIGPG G LT +L + +KKV A EID+R
Sbjct: 21 FKKSLGQNFLIDTNVLNRIVDYAEIGSESGAIEIGPGIGALTEQLAKRAKKVVAFEIDQR 80
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEF-----PQFD-----LVVANIPYGISSPLVA 113
++ IL+ A + + VI+KD LK + QF+ +VVAN+PY I++P++
Sbjct: 81 LLPILDETLAP---YSNVTVINKDVLKADVHEVFSEQFEEGQDVMVVANLPYYITTPILF 137
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
KL+ R +++QKE RL A PG E+ L++ ++ +VE VM V + F+P
Sbjct: 138 KLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVFVPQ 197
Query: 174 PKVDSSVV--IIRPKAEIPDVNLDEWRAFTRTCFSKKNKT 211
P VDS+++ + RPK + + + R F+++ KT
Sbjct: 198 PNVDSAIIRLLKRPKPVVEVTDETFFFEVVRASFAQRRKT 237
>gi|309803693|ref|ZP_07697783.1| dimethyladenosine transferase [Lactobacillus iners LactinV 11V1-d]
gi|309804982|ref|ZP_07699040.1| dimethyladenosine transferase [Lactobacillus iners LactinV 09V1-c]
gi|309806700|ref|ZP_07700695.1| dimethyladenosine transferase [Lactobacillus iners LactinV 03V1-b]
gi|312874063|ref|ZP_07734098.1| dimethyladenosine transferase [Lactobacillus iners LEAF 2052A-d]
gi|325913223|ref|ZP_08175592.1| dimethyladenosine transferase [Lactobacillus iners UPII 60-B]
gi|308164291|gb|EFO66548.1| dimethyladenosine transferase [Lactobacillus iners LactinV 11V1-d]
gi|308165742|gb|EFO67967.1| dimethyladenosine transferase [Lactobacillus iners LactinV 09V1-c]
gi|308166880|gb|EFO69064.1| dimethyladenosine transferase [Lactobacillus iners LactinV 03V1-b]
gi|311090403|gb|EFQ48812.1| dimethyladenosine transferase [Lactobacillus iners LEAF 2052A-d]
gi|325477487|gb|EGC80630.1| dimethyladenosine transferase [Lactobacillus iners UPII 60-B]
Length = 295
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 128/233 (54%), Gaps = 18/233 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+F K+K GQ+ L + ++ IV + + V+EIGPG G+LT +LL KV A E
Sbjct: 20 YFMKAKKSLGQNFLVDLPIVKKIVASAGVVEGSQVIEIGPGIGSLTEQLLLAGAKVLAYE 79
Query: 60 IDERMVEIL-NRRAADSG---FHDRLNVISKDALKTEFPQ-----FD-----LVVANIPY 105
+D + +IL N A G +DR +I KD LK +F FD +VVAN+PY
Sbjct: 80 VDPDLPDILYNELPAQIGNYELNDRFRIIMKDILKADFATDIADYFDVNRPIIVVANLPY 139
Query: 106 GISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDV 165
I++P++ KL++ TL++QKE A R+ AS + L + VK DV+F +V
Sbjct: 140 YITTPIILKLMHSPVKISQLTLMMQKEVAERISASHKSKAYGPLTIAVKKDMDVDFAFEV 199
Query: 166 SKRDFLPCPKVDSSVVIIRP-KAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
+ F+P PKVDS+VV+++P + ++ + D + + FS++ KTL K
Sbjct: 200 KRTSFMPSPKVDSAVVVLKPLEHKLLIEHEDLFNQIVKLAFSQRRKTLNNNLK 252
>gi|334881255|emb|CCB82094.1| ribosomal RNA small subunit methyltransferase A [Lactobacillus
pentosus MP-10]
Length = 295
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 120/223 (53%), Gaps = 23/223 (10%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS GQ+ LT+Q VL +IV + I +D V+EIGPG G LT L + V A EID+R++
Sbjct: 26 KSLGQNFLTDQNVLHNIVATADIGANDNVIEIGPGIGALTEYLARAAHHVLAFEIDDRLL 85
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQ-----------FDLVVANIPYGISSPLVAK 114
IL+ AD +D + V+++D LK + F LV AN+PY I++P++
Sbjct: 86 PILDETLAD---YDNVTVVNQDILKADLAAMISEHLDNERPFKLV-ANLPYYITTPILMN 141
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
L+ G +F + +++QKE A RL A PG + L + V+ E M V + F+P P
Sbjct: 142 LLAGDVAFENIVVMMQKEVADRLAAEPGTKAYGALTIAVQYRMAAEMAMVVPRTVFVPAP 201
Query: 175 KVDSSVV---IIRPKAEIPDVNLDEWRAF--TRTCFSKKNKTL 212
VDS++V + P+ +P DE F + F+ + K L
Sbjct: 202 NVDSAIVKLTALPPRTHVP---FDEAAFFKVVKAGFAHRRKNL 241
>gi|78184856|ref|YP_377291.1| dimethyladenosine transferase [Synechococcus sp. CC9902]
gi|119365856|sp|Q3AXF3.1|RSMA_SYNS9 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|78169150|gb|ABB26247.1| dimethyladenosine transferase [Synechococcus sp. CC9902]
Length = 274
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 107/188 (56%), Gaps = 14/188 (7%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLL-EVSKKVHAIEIDERMVEI 67
GQH L + RVLD IV + + DD VLE+GPG G LT +LL + ++HAIE+D +V
Sbjct: 13 GQHWLRDARVLDQIVEAARLQQDDCVLEVGPGRGALTERLLASPAAQIHAIELDRDLVRG 72
Query: 68 LNRRAADSGFHDRLNVISKDALKTEFPQFD-----LVVANIPYGISSPLVAKLVYG---- 118
L+ R G R ++ D L+ D VVANIPY I+ PL+A+L+
Sbjct: 73 LHDR---FGSESRFSLREGDVLEAPLHLVDGGFANKVVANIPYNITGPLLARLIGRLDRP 129
Query: 119 -TKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
++ LLLQKE A R+ A PG S F+ L+V ++L+AD V V R F P PKV
Sbjct: 130 VEPTYDCLVLLLQKEVAERIRAKPGRSSFSALSVRMQLLADCSLVCPVPPRCFQPPPKVQ 189
Query: 178 SSVVIIRP 185
S V++++P
Sbjct: 190 SEVILLKP 197
>gi|383315712|ref|YP_005376554.1| dimethyladenosine transferase [Frateuria aurantia DSM 6220]
gi|379042816|gb|AFC84872.1| dimethyladenosine transferase [Frateuria aurantia DSM 6220]
Length = 258
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 116/222 (52%), Gaps = 13/222 (5%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQH L ++ +D IV + P DTV+EIGPG G +T LL+ + ++ AIE+D ++
Sbjct: 7 KHFGQHFLHDRHYVDRIVGAIAPRPADTVVEIGPGEGAMTFPLLKAAGRLTAIELDAELI 66
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDL--------VVANIPYGISSPLVAKLVY 117
L RAA G +L VI D LK + + + N+PY ISSP++ V
Sbjct: 67 PGLEARAASIG---QLQVIRSDILKVDISRLATELGAERLRIAGNLPYYISSPILFHCVD 123
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
+ +LQKE R+ A+PG + RL+V ++L V + V F P PKVD
Sbjct: 124 HAAAIEDMHFMLQKEVVDRMAAAPGSKIYGRLSVMLQLRCQVTPLFIVPPGAFRPPPKVD 183
Query: 178 SSVVIIR--PKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
S+VV ++ P ++PD + + F+++ KTLG T K
Sbjct: 184 SAVVRMQPLPPEQLPDADSRRLHDIVKAAFAQRRKTLGNTLK 225
>gi|404330868|ref|ZP_10971316.1| dimethyladenosine transferase [Sporolactobacillus vineae DSM 21990
= SL153]
Length = 294
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 131/240 (54%), Gaps = 22/240 (9%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS GQ+ L ++ +L +IV+ +++ D V+EIGPG G+LT L E + KV A+EID R+
Sbjct: 24 KSLGQNFLADENILKNIVQAANLTRDSYVVEIGPGAGSLTQYLAEAAGKVVAVEIDGRLK 83
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFD----------LVVANIPYGISSPLVAKL 115
IL + +D + V D LK + P+ VVAN+PY +++P++ KL
Sbjct: 84 AILEETLQN---YDNVVVRFGDVLKMDLPKMIAEEFPADAAVTVVANLPYYVTTPILLKL 140
Query: 116 VYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPK 175
+ RS +++QKE A RL ASPG + L++ V+ +AD VM V + F+P P
Sbjct: 141 LTDHLPLRSIVVMVQKEVADRLEASPGQKSYGSLSIAVQYLADPSIVMTVPRTVFIPQPN 200
Query: 176 VDSSVVI--IRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATF-------KQKKKVIELL 226
VDS+V+ IRP+ + + + R F+ + KTL +QK+ V+++L
Sbjct: 201 VDSAVIRLDIRPEKRVAVTDEPFFFQIIRASFAHRRKTLMNNLMHQLFPKEQKEAVLDVL 260
>gi|395651028|ref|ZP_10438878.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas extremaustralis 14-3 substr. 14-3b]
Length = 270
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/228 (35%), Positives = 120/228 (52%), Gaps = 18/228 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ H+++ GQ+ L + V+D I+R P+D +LEIGPG G LT LL ++ +E
Sbjct: 5 YQHRARKRFGQNFLHDAGVIDRILRSIHAKPEDRLLEIGPGQGALTQGLLASGAQLDVVE 64
Query: 60 IDERMVEILNRRAADSGFHDRLNVI--SKDALKTEF------PQFDLVVANIPYGISSPL 111
+D+ ++ ILN++ F + N I DALK +F P VV N+PY IS+PL
Sbjct: 65 LDKDLIPILNQQ-----FGGKSNFILHQGDALKFDFNTLNAAPNSLRVVGNLPYNISTPL 119
Query: 112 VAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFL 171
+ L+ R +LQKE RL A PG ++ RL++ V+ VE + +V F
Sbjct: 120 IFHLLNNAGIIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFN 179
Query: 172 PCPKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
P PKVDS++V + P A +P D R F+++ KTL T K
Sbjct: 180 PPPKVDSAIVRLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNTLK 227
>gi|138893714|ref|YP_001124167.1| dimethyladenosine transferase [Geobacillus thermodenitrificans
NG80-2]
gi|166221668|sp|A4IJB8.1|RSMA_GEOTN RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|134265227|gb|ABO65422.1| Dimethyladenosine transferase [Geobacillus thermodenitrificans
NG80-2]
Length = 293
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/221 (35%), Positives = 121/221 (54%), Gaps = 17/221 (7%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + +L IV + I+ D +EIGPG G LT +L +KKV A EID R
Sbjct: 22 FKKSLGQNFLIDTNILRKIVDAAGISGDTGAIEIGPGIGALTEQLARRAKKVVAFEIDSR 81
Query: 64 MVEILNRRAADS-GFHDRLNVISKDALKT--------EFPQFD--LVVANIPYGISSPLV 112
++ IL AD+ +D + +I +D LK EF + +VVAN+PY +++P++
Sbjct: 82 LLPIL----ADTLSAYDNVRIIHQDVLKADLHAVIAEEFAEVSDRMVVANLPYYVTTPII 137
Query: 113 AKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
KL+ R +++QKE A RL A PG ++ L + V+ + E VM V + F+P
Sbjct: 138 MKLLTERLPIRGMVVMMQKEVADRLAAKPGTKDYGSLTIAVQYYTEAEVVMTVPRTVFMP 197
Query: 173 CPKVDSSVVIIRPKAEIPDVNLDEWRAF--TRTCFSKKNKT 211
P VDS+V+ + ++ P DE F R F+++ KT
Sbjct: 198 QPNVDSAVIRLTKRSHPPVAVEDEEVFFQVVRASFAQRRKT 238
>gi|15644188|ref|NP_229237.1| dimethyladenosine transferase [Thermotoga maritima MSB8]
gi|27151616|sp|Q9X1F1.1|RSMA_THEMA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|4982002|gb|AAD36507.1|AE001795_10 dimethyladenosine transferase [Thermotoga maritima MSB8]
Length = 279
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 131/229 (57%), Gaps = 8/229 (3%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
K GQ L++ R+ IV+ + + P+D V+EIG G G LT +L + +V A EIDE
Sbjct: 33 LKKHLGQVFLSDDRIAKRIVKAAELTPEDVVVEIGAGAGTLTEELAKTGARVIAYEIDES 92
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTE-FPQFDLVVANIPYGISSPLVAKLVYGTKSF 122
+ IL R + + + + +D LK + P+ + V+NIPY I+ PL+ K++ F
Sbjct: 93 LAPILQERLSK---YPNVELRFEDFLKAKNVPEGAICVSNIPYNITGPLMEKII--EWKF 147
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
+ A +++QKE R+LA PG + L+V V+ +V+ + DVS+ F+P P+VDS+VV
Sbjct: 148 KRAIVMIQKEVGERILAKPGKKTYGYLSVVVQTFYEVKKLFDVSRSCFVPNPEVDSTVVD 207
Query: 183 IRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLSKQ 231
++ K D++ ++++ F F+KK KTL + + E + LS++
Sbjct: 208 LKRKP--VDLDFEKFKKFVSMIFAKKRKTLKNNLRPFLSIFEGVDLSRR 254
>gi|440744084|ref|ZP_20923390.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae BRIP39023]
gi|440374540|gb|ELQ11268.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae BRIP39023]
Length = 268
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 120/226 (53%), Gaps = 14/226 (6%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ H+++ GQ+ L + V+D I+R P+D +LEIGPG G LT LL+ ++ +E
Sbjct: 5 YQHRARKRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTEGLLDSGAQLDVVE 64
Query: 60 IDERMVEILNRRAADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLVA 113
+D+ ++ ILN + A+ N+ DALK +F P+ VV N+PY IS+PL+
Sbjct: 65 LDKDLIPILNGQFANK---PNFNLHQGDALKFDFNTLGAEPRSLRVVGNLPYNISTPLIF 121
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ R +LQKE R+ A PG ++ RL++ V+ VE + +V F P
Sbjct: 122 HLLQNASLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPP 181
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P +P D R F+++ KTL T K
Sbjct: 182 PKVDSAIVRLVPYETLPHPAKDHRVLERIVREAFNQRRKTLRNTLK 227
>gi|347727154|gb|AEP19935.1| dimethyladenosine transferase [Bacillus aquimaris]
Length = 293
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 123/221 (55%), Gaps = 15/221 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + +L +I + + + +EIGPG G LT L S KV A EID+R
Sbjct: 22 FKKSLGQNFLIDPNILRNITEHAGLTKETAAIEIGPGIGALTEHLARTSGKVVAFEIDQR 81
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKT--------EFPQFD--LVVANIPYGISSPLVA 113
++ IL+ + +D + +I++D L+ E ++ +VVAN+PY +++P++
Sbjct: 82 LIPILDDTLSP---YDNVKIINEDILEADVEEIINKELAGYEDIMVVANLPYYVTTPIIL 138
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
KL+ R ++LQKE R+ A PG E+ L++ ++ + E VM V K F+P
Sbjct: 139 KLLMERLPIRGICVMLQKEVGDRISAKPGKKEYGSLSIAIQYYTEAEMVMTVPKTVFMPQ 198
Query: 174 PKVDSSVVII--RPKAEIPDVNLDEWRAFTRTCFSKKNKTL 212
P VDS+V+ + R K + +N D + TR+ F+++ KT+
Sbjct: 199 PNVDSAVIRLTKREKPPVDVINEDFFFTVTRSSFAQRRKTI 239
>gi|37521560|ref|NP_924937.1| rRNA (adenine-N6,N6)-dimethyltransferase [Gloeobacter violaceus PCC
7421]
gi|62900565|sp|Q7NJ41.1|RSMA_GLOVI RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|35212558|dbj|BAC89932.1| rRNA (adenine-N6,N6)-dimethyltransferase [Gloeobacter violaceus PCC
7421]
Length = 272
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 109/190 (57%), Gaps = 9/190 (4%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
++ K GQH L + VLD IV + + D VLEIGPG G+LT +LL V A+EID
Sbjct: 1 MYTLKRFGQHWLNDGAVLDRIVAAAGLACGDRVLEIGPGLGSLTARLLR-QVPVVAVEID 59
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQ-FDLVVANIPYGISSPLVAKLVYG-- 118
R V L R+ G R ++ D L+ P+ ++VVANIPY IS P++AKL
Sbjct: 60 RRAVAQLQRQ---FGGDKRFVLVEGDILREALPEPANVVVANIPYNISGPILAKLTGSLA 116
Query: 119 --TKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKV 176
+ FR+ LL+QKE +R+ A PG + L+V ++ +A+ E + +V F P PKV
Sbjct: 117 QPIRRFRTIVLLVQKELGQRIAAPPGSRTYGALSVRLQYLAECELLFEVPSHCFTPPPKV 176
Query: 177 DSSVVIIRPK 186
DS+V+ + P+
Sbjct: 177 DSAVIRLTPR 186
>gi|422650761|ref|ZP_16713562.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. actinidiae str. M302091]
gi|330963845|gb|EGH64105.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. actinidiae str. M302091]
Length = 268
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 118/226 (52%), Gaps = 14/226 (6%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
F H+++ GQ+ L + V+D I+R P+D +LEIGPG G LT LL ++ +E
Sbjct: 5 FQHRARKRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTEGLLNSGAQLDVVE 64
Query: 60 IDERMVEILNRRAADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLVA 113
+D+ ++ ILN + A N+ DALK +F P+ VV N+PY IS+PL+
Sbjct: 65 LDKDLIPILNSQFASK---PNFNLHQGDALKFDFNTLGAEPRSLRVVGNLPYNISTPLIF 121
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ R +LQKE R+ A PG ++ RL++ V+ VE + +V F P
Sbjct: 122 HLLQNASLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPP 181
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P +P D R F+++ KTL T K
Sbjct: 182 PKVDSAIVRLVPYETLPHPAKDHRVLEQVVREAFNQRRKTLRNTLK 227
>gi|222100031|ref|YP_002534599.1| Dimethyladenosine transferase [Thermotoga neapolitana DSM 4359]
gi|254808100|sp|B9K8F0.1|RSMA_THENN RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|221572421|gb|ACM23233.1| Dimethyladenosine transferase [Thermotoga neapolitana DSM 4359]
Length = 260
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 131/231 (56%), Gaps = 8/231 (3%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I K GQ L++ R+ IV+++ + PDD V+EIG G G LT +L + +V A EID
Sbjct: 12 IRLKKHLGQVFLSDDRIAKRIVKEADLKPDDVVVEIGAGAGTLTEELAKTGARVIAYEID 71
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKT-EFPQFDLVVANIPYGISSPLVAKLVYGTK 120
E + IL R + + + + +D LK + P+ + V+NIPY ++ P++ K++
Sbjct: 72 EGLAPILQERLSK---YPNVELRFEDFLKARDVPEEAICVSNIPYSVTGPIMEKII--EW 126
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
F+ A +++QKE R+L+ PG + L+V V+ +V + DVS+ F+P P+VDS V
Sbjct: 127 RFKKAIVMVQKEVGERILSKPGRKSYGYLSVVVQTFYEVRKLFDVSRSYFVPNPEVDSVV 186
Query: 181 VIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLSKQ 231
V ++ KA +++ +++ F FSKK KTL + V E + LS++
Sbjct: 187 VEMKRKA--VEIDFPQFKKFVSMIFSKKRKTLKNNLRPFLSVFEGVDLSRR 235
>gi|302130722|ref|ZP_07256712.1| dimethyladenosine transferase [Pseudomonas syringae pv. tomato
NCPPB 1108]
Length = 268
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 118/226 (52%), Gaps = 14/226 (6%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
F H+++ GQ+ L + V+D I+R P+D +LEIGPG G LT LL ++ +E
Sbjct: 5 FQHRARKRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTEGLLNSGAQLDVVE 64
Query: 60 IDERMVEILNRRAADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLVA 113
+D+ ++ ILN + A N+ DALK +F P+ VV N+PY IS+PL+
Sbjct: 65 LDKDLIPILNSQFAS---QPNFNLHQGDALKFDFNTLGAEPRSLRVVGNLPYNISTPLIF 121
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ R +LQKE R+ A PG ++ RL++ V+ VE + +V F P
Sbjct: 122 HLLQNASLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPP 181
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P +P D R F+++ KTL T K
Sbjct: 182 PKVDSAIVRLVPYETLPHPAKDHRVLERVVREAFNQRRKTLRNTLK 227
>gi|28867779|ref|NP_790398.1| dimethyladenosine transferase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|422659008|ref|ZP_16721438.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. lachrymans str. M302278]
gi|33516927|sp|Q88A46.1|RSMA_PSESM RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|28851014|gb|AAO54093.1| dimethyladenosine transferase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|331017631|gb|EGH97687.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. lachrymans str. M302278]
Length = 268
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 118/226 (52%), Gaps = 14/226 (6%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
F H+++ GQ+ L + V+D I+R P+D +LEIGPG G LT LL ++ +E
Sbjct: 5 FQHRARKRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTEGLLNSGAQLDVVE 64
Query: 60 IDERMVEILNRRAADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLVA 113
+D+ ++ ILN + A N+ DALK +F P+ VV N+PY IS+PL+
Sbjct: 65 LDKDLIPILNSQFAS---QPNFNLHQGDALKFDFNTLGAEPRSLRVVGNLPYNISTPLIF 121
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ R +LQKE R+ A PG ++ RL++ V+ VE + +V F P
Sbjct: 122 HLLQNASLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPP 181
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P +P D R F+++ KTL T K
Sbjct: 182 PKVDSAIVRLVPYETLPHPAKDHRVLERVVREAFNQRRKTLRNTLK 227
>gi|312871246|ref|ZP_07731344.1| dimethyladenosine transferase [Lactobacillus iners LEAF 3008A-a]
gi|312872808|ref|ZP_07732873.1| dimethyladenosine transferase [Lactobacillus iners LEAF 2062A-h1]
gi|311091850|gb|EFQ50229.1| dimethyladenosine transferase [Lactobacillus iners LEAF 2062A-h1]
gi|311093260|gb|EFQ51606.1| dimethyladenosine transferase [Lactobacillus iners LEAF 3008A-a]
Length = 295
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 125/227 (55%), Gaps = 15/227 (6%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS GQ+ L + ++ IV + + V+EIGPG G+LT +LL KV A E+D +
Sbjct: 26 KSLGQNFLVDLPIVKKIVASAGVVEGSQVIEIGPGIGSLTEQLLLAGAKVLAYEVDPDLP 85
Query: 66 EIL-NRRAADSG---FHDRLNVISKDALKTEFPQ-----FDL-----VVANIPYGISSPL 111
+IL N A G +DR +I KD LK +F FD+ VVAN+PY I++P+
Sbjct: 86 DILYNELPAQIGNYELNDRFRIIMKDILKADFATDIADYFDVNRPISVVANLPYYITTPI 145
Query: 112 VAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFL 171
+ KL++ TL++QKE A R+ AS + L + VK DV+F +V + F+
Sbjct: 146 ILKLMHSPVKISQLTLMMQKEVAERISASHKSKAYGPLTIAVKKDMDVDFAFEVKRTSFM 205
Query: 172 PCPKVDSSVVIIRP-KAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
P PKVDS+VV+++P + ++ + D + + FS++ KTL K
Sbjct: 206 PSPKVDSAVVVLKPLEHKLLIEHEDLFNQIVKLAFSQRRKTLNNNLK 252
>gi|410093045|ref|ZP_11289545.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas viridiflava UASWS0038]
gi|409759578|gb|EKN44789.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas viridiflava UASWS0038]
Length = 268
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 118/227 (51%), Gaps = 14/227 (6%)
Query: 2 IFFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAI 58
++ H+++ GQ+ L + V+D I+R P+D +LEIGPG G LT LL + +
Sbjct: 4 LYQHRARKRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTEGLLNSGAHLDVV 63
Query: 59 EIDERMVEILNRRAADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLV 112
E+D+ ++ ILN + A N+ DALK +F P+ VV N+PY IS+PL+
Sbjct: 64 ELDKDLIPILNSQFAGK---PNFNLHQGDALKFDFNSLGAEPRSLRVVGNLPYNISTPLI 120
Query: 113 AKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
L+ R +LQKE RL A PG ++ RL++ V+ VE + +V F P
Sbjct: 121 FHLLQNASLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNP 180
Query: 173 CPKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P +P D R F+++ KTL T K
Sbjct: 181 PPKVDSAIVRLVPHETLPHPAKDHRLLERVVREAFNQRRKTLRNTLK 227
>gi|261417535|ref|YP_003251217.1| dimethyladenosine transferase [Geobacillus sp. Y412MC61]
gi|319765192|ref|YP_004130693.1| dimethyladenosine transferase [Geobacillus sp. Y412MC52]
gi|261373992|gb|ACX76735.1| dimethyladenosine transferase [Geobacillus sp. Y412MC61]
gi|317110058|gb|ADU92550.1| dimethyladenosine transferase [Geobacillus sp. Y412MC52]
Length = 293
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 120/222 (54%), Gaps = 17/222 (7%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + +L IV + I+PD +EIGPG G LT +L +KKV A EID R
Sbjct: 22 FKKSLGQNFLIDANILRKIVDVADISPDTGAIEIGPGIGALTEQLARRAKKVVAFEIDGR 81
Query: 64 MVEILNRRAADS-GFHDRLNVISKDALKTEFPQF----------DLVVANIPYGISSPLV 112
++ IL AD+ +D + + +D LK + +VVAN+PY +++P++
Sbjct: 82 LLPIL----ADTLSPYDNVRIFHQDVLKADLHAVIAEELADVSDRMVVANLPYYVTTPII 137
Query: 113 AKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
KL+ R ++LQKE A RL A PG ++ L + V+ + E +M V + F+P
Sbjct: 138 MKLLTDRLPIRGMVVMLQKEVADRLAAKPGTKDYGSLTIAVQYYTEAEVIMTVPRTVFMP 197
Query: 173 CPKVDSSVVIIRPKAEIPDVNLDEWRAF--TRTCFSKKNKTL 212
P VDS+V+ + + P V DE F R F+++ KTL
Sbjct: 198 QPNVDSAVIRLVKRQHPPVVVDDEGVFFQVVRASFAQRRKTL 239
>gi|91205019|ref|YP_537374.1| dimethyladenosine transferase [Rickettsia bellii RML369-C]
gi|119365058|sp|Q1RK29.1|RSMA_RICBR RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|91068563|gb|ABE04285.1| Dimethyladenosine transferase [Rickettsia bellii RML369-C]
Length = 268
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 118/219 (53%), Gaps = 9/219 (4%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKV-HAIEIDERM 64
K GQ+ + + + D IVR S + + VLEIGPGTG LT +L + K+ IE DER
Sbjct: 18 KKHGQNFIFDGSLCDKIVRASGLEENSNVLEIGPGTGGLTRSILHKNPKLLTVIETDERC 77
Query: 65 VEILNRRAADSGFHDRLNVISKDALKTEFPQFDL----VVANIPYGISSPLVAKLVYGTK 120
+ +LN +H LN+I +DALK + + +++N+PY I + LV + + +
Sbjct: 78 IPLLNEIKQ---YHPNLNIIKQDALKLKLSDLNTNKITIISNLPYHIGTELVIRWLKESS 134
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
S TL+LQKE R+ A P + RL+V L+A VE DV+ F P PKV S++
Sbjct: 135 LVASMTLMLQKEVVERICAKPSTKAYGRLSVICSLIATVEKCFDVAPTAFYPPPKVYSAI 194
Query: 181 VIIRPKAEIPDVNL-DEWRAFTRTCFSKKNKTLGATFKQ 218
V + P IP+ +L + T+ F+ + K + ++ K
Sbjct: 195 VKLTPLENIPNSDLISKVELITKMAFAGRRKMIKSSLKN 233
>gi|157827650|ref|YP_001496714.1| dimethyladenosine transferase [Rickettsia bellii OSU 85-389]
gi|166221696|sp|A8GXS7.1|RSMA_RICB8 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|157802954|gb|ABV79677.1| dimethyladenosine transferase [Rickettsia bellii OSU 85-389]
Length = 268
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 118/219 (53%), Gaps = 9/219 (4%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKV-HAIEIDERM 64
K GQ+ + + + D IVR S + + VLEIGPGTG LT +L + K+ IE DER
Sbjct: 18 KKHGQNFIFDGSLCDKIVRASGLEENSNVLEIGPGTGGLTRSILHKNPKLLTVIETDERC 77
Query: 65 VEILNRRAADSGFHDRLNVISKDALKTEFPQFDL----VVANIPYGISSPLVAKLVYGTK 120
+ +LN +H LN+I +DALK + + +++N+PY I + LV + + +
Sbjct: 78 IPLLNEIKQ---YHPNLNIIKQDALKLKLSDLNTNKITIISNLPYHIGTELVIRWLKESS 134
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
S TL+LQKE R+ A P + RL+V L+A VE DV+ F P PKV S++
Sbjct: 135 LVASMTLMLQKEVVERICAKPSTKAYGRLSVICSLIATVEKCFDVAPTAFYPPPKVYSAI 194
Query: 181 VIIRPKAEIPDVNL-DEWRAFTRTCFSKKNKTLGATFKQ 218
V + P IP+ +L + T+ F+ + K + ++ K
Sbjct: 195 VKLTPLENIPNSDLISKVELITKMAFAGRRKMIKSSLKN 233
>gi|88604257|ref|YP_504435.1| dimethyladenosine transferase [Methanospirillum hungatei JF-1]
gi|119365031|sp|Q2FSA9.1|RSMA_METHJ RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|88189719|gb|ABD42716.1| dimethyladenosine transferase [Methanospirillum hungatei JF-1]
Length = 256
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 118/211 (55%), Gaps = 4/211 (1%)
Query: 8 KGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEI 67
+ QH LT+ R++ I I+ VLEIGPG G LT LLE +V ++E+D ++E
Sbjct: 5 RDQHFLTDPRIVARIADILDIS-GRIVLEIGPGEGILTEALLERGARVISVELDRTLIER 63
Query: 68 LNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATL 127
L+RR A L ++ DA+K P F++V+AN+PY ISSP+ +L+ F +A L
Sbjct: 64 LSRRFASEIADGSLTLLQGDAVKVPLPPFEIVMANLPYSISSPITFRLL--DIGFEAAIL 121
Query: 128 LLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKA 187
+ QKEFA R++A PG + RL++ ++ A D+ F P P V S+V+ I P+
Sbjct: 122 MYQKEFADRMMAHPGTRDCGRLSIMLQTYARANRCFDLPPGAFSPPPAVRSTVMWIEPRE 181
Query: 188 EI-PDVNLDEWRAFTRTCFSKKNKTLGATFK 217
+ P + + R F+++ KT+ +T K
Sbjct: 182 PLFPIHDRKIYEDLVRELFTRRRKTVQSTLK 212
>gi|238019586|ref|ZP_04600012.1| hypothetical protein VEIDISOL_01455 [Veillonella dispar ATCC 17748]
gi|237863784|gb|EEP65074.1| hypothetical protein VEIDISOL_01455 [Veillonella dispar ATCC 17748]
Length = 284
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 129/239 (53%), Gaps = 20/239 (8%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I K GQ+ L + ++D IV + + P + VLE+GPG G LT L + V AIE+D
Sbjct: 21 IKMSKKLGQNFLIKRGIVDEIVHAAELTPGEPVLEVGPGIGTLTQGLAQSGADVTAIELD 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFD-----LVVANIPYGISSPLVAKLV 116
R++E+L+ A +D + ++ D LK + P VVAN+PY I++P++ L+
Sbjct: 81 RRLLEVLDTTLAS---YDNVRIVHGDVLKLDVPTIMNHKPFKVVANLPYYITTPIIMSLL 137
Query: 117 YGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKV 176
+++QKE A R++A PG ++ L+V V+ + + V+DV + FLP P V
Sbjct: 138 ESKLPIERLVVMVQKEVALRMVAKPGTKDYGALSVAVQYYTEPDIVLDVPPKSFLPAPAV 197
Query: 177 DSSVV--IIRPKAEIPDVNLDEWRAFTRTC---FSKKNKTLGATFK----QKKKVIELL 226
SSV+ ++R K P V++ + + F R F+++ KT T K K ++ ELL
Sbjct: 198 TSSVIRCVLRDK---PPVDVIDEKLFFRVVKAGFAQRRKTFANTMKTTGLSKDRIEELL 253
>gi|196250755|ref|ZP_03149442.1| dimethyladenosine transferase [Geobacillus sp. G11MC16]
gi|196209705|gb|EDY04477.1| dimethyladenosine transferase [Geobacillus sp. G11MC16]
Length = 478
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/221 (35%), Positives = 121/221 (54%), Gaps = 17/221 (7%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + +L IV + I+ D +EIGPG G LT +L +KKV A EID R
Sbjct: 207 FKKSLGQNFLIDTNILRKIVDAAGISGDTGAIEIGPGIGALTEQLARRAKKVVAFEIDSR 266
Query: 64 MVEILNRRAADS-GFHDRLNVISKDALKT--------EFPQFD--LVVANIPYGISSPLV 112
++ IL AD+ +D + +I +D LK EF + +VVAN+PY +++P++
Sbjct: 267 LLPIL----ADTLSAYDNVRIIHQDVLKADLHAVIAEEFAEVSDRMVVANLPYYVTTPII 322
Query: 113 AKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
KL+ R +++QKE A RL A PG ++ L + V+ + E VM V + F+P
Sbjct: 323 MKLLTERLPIRGMVVMMQKEVADRLAAKPGTKDYGSLTIAVQYYTEAEVVMTVPRTVFMP 382
Query: 173 CPKVDSSVVIIRPKAEIPDVNLDEWRAF--TRTCFSKKNKT 211
P VDS+V+ + ++ P DE F R F+++ KT
Sbjct: 383 QPNVDSAVIRLTKRSHPPVAVEDEEVFFQVVRASFAQRRKT 423
>gi|373107972|ref|ZP_09522263.1| dimethyladenosine transferase [Stomatobaculum longum]
gi|371650138|gb|EHO15606.1| dimethyladenosine transferase [Stomatobaculum longum]
Length = 283
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 117/219 (53%), Gaps = 13/219 (5%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K GQ+ L + VLD I + + +D VLEIGPG G LT L E + KV A+EID
Sbjct: 22 FQKKFGQNFLIDSHVLDRIAAAAELTEEDAVLEIGPGIGTLTQHLAERAGKVLAVEIDRT 81
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL--------VVANIPYGISSPLVAKL 115
++ IL AD +D + ++ D L+ + VVAN+PY I++P++ L
Sbjct: 82 LIPILEESLAD---YDNVEILQGDILEQNLDELAEKLGGRPMKVVANLPYYITTPILMTL 138
Query: 116 VYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPK 175
+ S T+++Q+E A R+ ASPG ++ L++ V+ A E V +V FLP PK
Sbjct: 139 LESKLPIVSITVMVQREVAERMQASPGGKDYGALSLAVQYYAAAEIVANVPPHCFLPRPK 198
Query: 176 VDSSVVIIRPKAEIPDVNLDEWRAF--TRTCFSKKNKTL 212
V S+V+ ++ E P +E F R F+++ KTL
Sbjct: 199 VGSAVICLKKYREKPVQAENEALLFRIIRASFNQRRKTL 237
>gi|389848182|ref|YP_006350421.1| dimethyladenosine transferase [Haloferax mediterranei ATCC 33500]
gi|448618389|ref|ZP_21666626.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloferax mediterranei ATCC 33500]
gi|388245488|gb|AFK20434.1| dimethyladenosine transferase [Haloferax mediterranei ATCC 33500]
gi|445746760|gb|ELZ98218.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloferax mediterranei ATCC 33500]
Length = 287
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 116/212 (54%), Gaps = 15/212 (7%)
Query: 8 KGQHILTNQRVLDSIVRKSSINPDDT----VLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
+ QH L + RV+D I + PDDT VLEIG G G LT +LL V+ +V +E D
Sbjct: 32 RDQHFLVDDRVVDRI---PTYLPDDTDHSHVLEIGGGPGVLTDRLLAVADRVTVVEQDRT 88
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
+ L R +D DRL VI DAL+ + P+F V+N+PYGISS + +L+ K
Sbjct: 89 FADHLRREFSDPVEADRLTVIEGDALEADLPEFTACVSNLPYGISSEISFRLLPRGKPL- 147
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
L+ QKEF R+ A G SE+ RL+V+ + DVE V + F P P V S++V +
Sbjct: 148 --VLMFQKEFGERMAAESGTSEYGRLSVSAQHYGDVEVCEIVPREAFDPKPAVQSAIVRV 205
Query: 184 RPKAEIPDVNLDE---WRAFTRTCFSKKNKTL 212
P+ PD +D + F + F+++ KT+
Sbjct: 206 TPRD--PDYEVDNEEFFFDFVKALFTQRRKTI 235
>gi|56418570|ref|YP_145888.1| dimethyladenosine transferase [Geobacillus kaustophilus HTA426]
gi|297528410|ref|YP_003669685.1| dimethyladenosine transferase [Geobacillus sp. C56-T3]
gi|448236344|ref|YP_007400402.1| dimethyladenosine transferase [Geobacillus sp. GHH01]
gi|62900466|sp|Q5L3V8.1|RSMA_GEOKA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|56378412|dbj|BAD74320.1| dimethyladenosine transferase [Geobacillus kaustophilus HTA426]
gi|297251662|gb|ADI25108.1| dimethyladenosine transferase [Geobacillus sp. C56-T3]
gi|445205186|gb|AGE20651.1| dimethyladenosine transferase [Geobacillus sp. GHH01]
Length = 293
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 120/222 (54%), Gaps = 17/222 (7%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + +L IV + I+PD +EIGPG G LT +L +KKV A EID R
Sbjct: 22 FKKSLGQNFLIDANILRKIVDVADISPDTGAIEIGPGIGALTEQLARRAKKVVAFEIDGR 81
Query: 64 MVEILNRRAADS-GFHDRLNVISKDALKTEFPQF----------DLVVANIPYGISSPLV 112
++ IL AD+ +D + + +D LK + +VVAN+PY +++P++
Sbjct: 82 LLPIL----ADTLSPYDNVRIFHQDVLKADLHAVIAEELADVSDRMVVANLPYYVTTPII 137
Query: 113 AKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
KL+ R ++LQKE A RL A PG ++ L + V+ + E +M V + F+P
Sbjct: 138 MKLLTERLPIRGMVVMLQKEVADRLAAKPGTKDYGSLTIAVQYYTEAEVIMTVPRTVFMP 197
Query: 173 CPKVDSSVVIIRPKAEIPDVNLDEWRAF--TRTCFSKKNKTL 212
P VDS+V+ + + P V DE F R F+++ KTL
Sbjct: 198 QPNVDSAVIRLVKRQHPPVVVDDEGVFFQVVRASFAQRRKTL 239
>gi|410726073|ref|ZP_11364333.1| dimethyladenosine transferase [Clostridium sp. Maddingley MBC34-26]
gi|410601505|gb|EKQ56016.1| dimethyladenosine transferase [Clostridium sp. Maddingley MBC34-26]
Length = 283
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 125/222 (56%), Gaps = 11/222 (4%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + VL IV + +N +D ++EIGPG G LT +LL +KKV +IE+D
Sbjct: 19 FSKSLGQNFLVDDSVLRDIVNGADVNNEDFIIEIGPGVGTLTAQLLMKAKKVTSIELDND 78
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFD------LVVANIPYGISSPLVAKLVY 117
++ IL + G ++ +I KDALK +F + +VAN+PY +++P++ KL+
Sbjct: 79 LIPILKE---ELGENENFQLIHKDALKVDFNELIGDEKSVKLVANLPYYVTTPIIVKLLK 135
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
+F+S T+++QKE A R+ A P E+ L+V V+ + + V F+P PKV+
Sbjct: 136 EGYNFKSLTIMIQKEVAERINAEPNCKEYGSLSVLVQYYCNTSIIRRVPPTCFMPRPKVE 195
Query: 178 SSVVIIRPKAE--IPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
S V+ + AE + N+D R F+ + KTL + K
Sbjct: 196 SIVIRLDRLAEPRVKTKNVDLMFELVRNGFNMRRKTLWNSAK 237
>gi|423388189|ref|ZP_17365415.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG1X1-3]
gi|423416565|ref|ZP_17393654.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG3X2-1]
gi|401110219|gb|EJQ18130.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG3X2-1]
gi|401644379|gb|EJS62071.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG1X1-3]
Length = 292
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 126/223 (56%), Gaps = 21/223 (9%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + VL+ IV + I + +EIGPG G LT +L + +KKV A EID+R
Sbjct: 21 FKKSLGQNFLIDTNVLNRIVDHAEIGSESGAIEIGPGIGALTEQLAKRAKKVVAFEIDQR 80
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEF-----PQFD-----LVVANIPYGISSPLVA 113
++ IL+ A + + VI+KD LK + QF+ +VVAN+PY I++P++
Sbjct: 81 LLPILDETLAP---YSNVTVINKDVLKADVHEVFSEQFEEGQDVMVVANLPYYITTPILF 137
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
KL+ R +++QKE RL A PG E+ L++ ++ +VE VM V + F+P
Sbjct: 138 KLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVFVPQ 197
Query: 174 PKVDSSVV--IIRPKAEIPDVNLDEWRAF---TRTCFSKKNKT 211
P VDS+++ + RPK P V + + F R F+++ KT
Sbjct: 198 PNVDSAIIRLLKRPK---PVVEVKDETFFFEVVRASFAQRRKT 237
>gi|302185943|ref|ZP_07262616.1| dimethyladenosine transferase [Pseudomonas syringae pv. syringae
642]
Length = 268
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 119/226 (52%), Gaps = 14/226 (6%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ H+++ GQ+ L + V+D I+R P+D +LEIGPG G LT LL+ ++ +E
Sbjct: 5 YQHRARKRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTEGLLDSGAQLDVVE 64
Query: 60 IDERMVEILNRRAADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLVA 113
+D+ ++ ILN + A N+ DALK +F P+ VV N+PY IS+PL+
Sbjct: 65 LDKDLIPILNSQFAGK---PNFNLHQGDALKFDFNTLGAEPRSLRVVGNLPYNISTPLIF 121
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ R +LQKE R+ A PG ++ RL++ V+ VE + +V F P
Sbjct: 122 HLLQNASLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPP 181
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P +P D R F+++ KTL T K
Sbjct: 182 PKVDSAIVRLVPYETLPHPAKDHRVLERIVREAFNQRRKTLRNTLK 227
>gi|322801725|gb|EFZ22327.1| hypothetical protein SINV_09620 [Solenopsis invicta]
Length = 155
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I F+K KGQHIL N V+ ++V K+++ D VLEIGPGTGN+T+K+L+ +KKV A EID
Sbjct: 21 ILFNKDKGQHILKNPLVIQTMVEKAALRATDVVLEIGPGTGNMTVKMLDKAKKVIACEID 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLV 116
RMV L +R + + +L ++ D LK++ P FDL VANIPY ISSPLV KL+
Sbjct: 81 PRMVAELQKRVQGTVYQSKLQIVLGDVLKSDLPFFDLCVANIPYQISSPLVFKLL 135
>gi|21673632|ref|NP_661697.1| dimethyladenosine transferase [Chlorobium tepidum TLS]
gi|27151567|sp|Q8KE87.1|RSMA_CHLTE RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|21646748|gb|AAM72039.1| dimethyladenosine transferase [Chlorobium tepidum TLS]
Length = 275
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 119/223 (53%), Gaps = 11/223 (4%)
Query: 1 YIFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEI 60
+I K GQ+ L ++ + IVR+S I D V+EIGPG G LT +LEV AIE
Sbjct: 10 HIAAKKKLGQNFLLDRNIPRKIVRESGIKEGDRVVEIGPGFGALTTAILEVMPSFTAIEK 69
Query: 61 DERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL-----VVANIPYGISSPLVAKL 115
D + + NR H ++ +I D LK V+ NIPY I+SP++ +L
Sbjct: 70 DRELAK-FNREE-----HPQIELIEDDFLKVPLEPLAAGGKLSVLGNIPYSITSPILFRL 123
Query: 116 VYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPK 175
+ SATL++Q E A+R+ A PG E+ LAV ++ DV+++ V + F P P
Sbjct: 124 LDNRHLIASATLMIQHEVAQRIAAVPGTKEYGILAVQMQAFCDVKYLFKVGRAVFKPRPD 183
Query: 176 VDSSVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
VDS+V+ + PKA P + + +R F R F ++ KTL K+
Sbjct: 184 VDSAVIKMVPKAVDPVKDSEGFRTFVRRVFHQRRKTLLNNLKE 226
>gi|329768941|ref|ZP_08260368.1| dimethyladenosine transferase [Gemella sanguinis M325]
gi|328836658|gb|EGF86316.1| dimethyladenosine transferase [Gemella sanguinis M325]
Length = 286
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 123/219 (56%), Gaps = 13/219 (5%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + +L+ IV + IN V+EIGPG G+LT + + +K+V + EID R
Sbjct: 19 FKKSLGQNFLIDANILNRIVDGAGINDKVGVIEIGPGIGSLTEAVAKRAKRVISFEIDGR 78
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFD----------LVVANIPYGISSPLVA 113
++ IL+ AD + + +I+ D LK + + +VVAN+PY I++P++
Sbjct: 79 LLPILSETLAD---YSNVEIINNDILKVDVDKIIEEKMSDCEKIMVVANLPYYITTPILT 135
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ TK +++Q+E A RL A G ++N L + + +VE++ V K+ F+P
Sbjct: 136 HLIENTKRIDGYVVMMQREVANRLNAKVGTKDYNSLTILLNYYTNVEYLFTVPKKVFVPA 195
Query: 174 PKVDSSVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTL 212
P V+S+VV I K E ++ F R+CF ++ KTL
Sbjct: 196 PNVESAVVKIMTKDEKEFEADSKFFKFVRSCFVQRRKTL 234
>gi|291520367|emb|CBK75588.1| dimethyladenosine transferase [Butyrivibrio fibrisolvens 16/4]
Length = 284
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 121/220 (55%), Gaps = 15/220 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K GQ+ L + VLD+I+ + I DD VLEIGPG G +T +L E +++V A+EID+
Sbjct: 21 FQKKYGQNFLIDGNVLDNIIDAAGITKDDFVLEIGPGIGTMTQRLCEEAREVVAVEIDKT 80
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFD---------LVVANIPYGISSPLVAK 114
++ IL+ + + VI++D LK + VVAN+PY I++P++
Sbjct: 81 LIPILDDTLST---YKNWTVINQDILKVDIKALADEKNGGKPIKVVANLPYYITTPIIMG 137
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
L S T+++QKE A R+ PG E+ L++ V+ ++ E V +V F+P P
Sbjct: 138 LFESHVPLESITIMVQKEVADRMQEGPGSKEYGALSLAVQYYSNPEIVCEVPPSCFMPQP 197
Query: 175 KVDSSVVIIRPKAEIPDVNLDEWRAFT--RTCFSKKNKTL 212
KV S+V+ ++ E P V DE F R F+++ KTL
Sbjct: 198 KVASTVITLKCH-EKPPVECDEKLLFQIIRASFNQRRKTL 236
>gi|160947751|ref|ZP_02094918.1| hypothetical protein PEPMIC_01686 [Parvimonas micra ATCC 33270]
gi|158446885|gb|EDP23880.1| dimethyladenosine transferase [Parvimonas micra ATCC 33270]
Length = 280
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 134/237 (56%), Gaps = 17/237 (7%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K+ GQ+ LT++ +L+ IV S++ D V+EIGPG G LT LLE + KV +IEID R
Sbjct: 20 FSKNFGQNFLTDRNILEKIVEVSAVGKDYGVIEIGPGFGVLTKFLLEKAGKVVSIEIDTR 79
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFD---------LVVANIPYGISSPLVAK 114
+ E+L+ ++ +D + DALK + + +VVAN+PY +++P++ K
Sbjct: 80 LKEVLDYTLSE---YDNFEFVQSDALKIDLKKLIEEKFTQKKIVVVANLPYYVTTPIITK 136
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
L+ S T+++QKE A+RL+A + + +++ VK AD VS+ F+P P
Sbjct: 137 LLESDLDLESITIMVQKEVAQRLVADENSKDNSSISLFVKYYADANIAFSVSRNVFVPAP 196
Query: 175 KVDSSVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK----QKKKVIELLR 227
VDSSVV ++ K E + ++ + F + KT+ +F +K+K+I++L
Sbjct: 197 NVDSSVVNMKLKKEKFEYEKTMFK-LIKNGFENRRKTILNSFCKSGIEKEKIIKILE 252
>gi|448329924|ref|ZP_21519218.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natrinema versiforme JCM 10478]
gi|445613112|gb|ELY66822.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natrinema versiforme JCM 10478]
Length = 279
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 116/210 (55%), Gaps = 10/210 (4%)
Query: 8 KGQHILTNQRVLDSIVRKSSINPDDT--VLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
+ QH L + RVLD + + + DT +LEIG GTG LT +LL V +V +E D +
Sbjct: 19 RDQHFLVDDRVLDRLPSYLTESDADTSHLLEIGGGTGVLTDRLLAVGDEVTVVERDRELA 78
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSA 125
E L AD L V+ DAL+ + P+F V+N+PYG+SS + +L K
Sbjct: 79 EFLREEFADEIAAGELTVVQGDALEVDLPEFTASVSNLPYGVSSEIAFRLFPEKKPL--- 135
Query: 126 TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP 185
L+ Q+EFA R++A P +E+ RL+V+ + AD+E V + K F P P V S+VV P
Sbjct: 136 VLMFQQEFAERMVAEPNTAEYGRLSVSSQHYADIELVESIPKEAFSPPPAVQSAVVRAIP 195
Query: 186 KAEIPDVNLDE---WRAFTRTCFSKKNKTL 212
+ PD +D+ + F + F+++ KT+
Sbjct: 196 RE--PDYEIDDEDFFLRFVKALFTQRRKTI 223
>gi|433590731|ref|YP_007280227.1| dimethyladenosine transferase [Natrinema pellirubrum DSM 15624]
gi|448331866|ref|ZP_21521116.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natrinema pellirubrum DSM 15624]
gi|433305511|gb|AGB31323.1| dimethyladenosine transferase [Natrinema pellirubrum DSM 15624]
gi|445628435|gb|ELY81742.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natrinema pellirubrum DSM 15624]
Length = 278
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 115/210 (54%), Gaps = 10/210 (4%)
Query: 8 KGQHILTNQRVLDSI-VRKSSINPDDT-VLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
+ QH L + RVLD + +I+ D + +LEIG GTG LT +LL V +V +E D +
Sbjct: 19 RDQHFLVDDRVLDRLPTYLEAIDADTSHLLEIGGGTGALTDRLLAVGDEVTVVERDRDLA 78
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSA 125
E L AD L VI DAL + P F V+N+PYG+SS + +L K
Sbjct: 79 EFLREEFADEIAAGELTVIEGDALAVDLPDFTASVSNLPYGVSSEIAFRLFPEKKPL--- 135
Query: 126 TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP 185
L+ Q+EFA R++A PG SE+ RL+V+ + ADVE V + K F P P V S+VV P
Sbjct: 136 VLMFQQEFAERMVAEPGTSEYGRLSVSSQHYADVELVESIPKEAFDPQPAVQSAVVRAVP 195
Query: 186 KAEIPDVNL---DEWRAFTRTCFSKKNKTL 212
+ PD + D + F + F+++ KT+
Sbjct: 196 RE--PDYTVADEDFFLRFVKAVFTQRRKTV 223
>gi|313893343|ref|ZP_07826917.1| dimethyladenosine transferase [Veillonella sp. oral taxon 158 str.
F0412]
gi|313442112|gb|EFR60530.1| dimethyladenosine transferase [Veillonella sp. oral taxon 158 str.
F0412]
Length = 284
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 129/239 (53%), Gaps = 20/239 (8%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I K GQ+ L + ++D IV + + P + VLE+GPG G LT L + V AIE+D
Sbjct: 21 IKMSKKLGQNFLIKRGIVDEIVHAAELTPGEPVLEVGPGIGTLTQGLAQSGADVTAIELD 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFD-----LVVANIPYGISSPLVAKLV 116
R++E+L+ A +D + ++ D LK + P VVAN+PY I++P++ L+
Sbjct: 81 RRLLEVLDTTLAS---YDNVRIVHGDVLKLDVPTIMNHKPFKVVANLPYYITTPIIMSLL 137
Query: 117 YGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKV 176
+++QKE A R++A PG ++ L+V V+ + + V+DV + FLP P V
Sbjct: 138 ESKLPIERLVVMVQKEVALRMVAKPGTKDYGALSVAVQYYTEPDIVLDVPPKSFLPAPAV 197
Query: 177 DSSVV--IIRPKAEIPDVNLDEWRAFTRTC---FSKKNKTLGATFK----QKKKVIELL 226
SSV+ ++R K P V++ + + F R F+++ KT T K K ++ ELL
Sbjct: 198 TSSVIRCVLRDK---PPVDVIDEKLFFRVVKAGFAQRRKTFSNTMKTTGLSKDRIEELL 253
>gi|429769059|ref|ZP_19301185.1| dimethyladenosine transferase [Brevundimonas diminuta 470-4]
gi|429187974|gb|EKY28867.1| dimethyladenosine transferase [Brevundimonas diminuta 470-4]
Length = 268
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 120/221 (54%), Gaps = 13/221 (5%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV-SKKVHAIEIDERM 64
KS GQH L + V IVR + V+E+GPG G LT LLE + KV +E D R
Sbjct: 19 KSFGQHFLLDLNVTRKIVRYAGPFDGRAVIEVGPGPGGLTRALLESDAGKVVLVEKDPRF 78
Query: 65 VEILNRRAADSGFHDRLNVISKDALKTEFPQFDLV------VANIPYGISSPLVAKLVYG 118
+ +L+ SG RLN++ DALK + + DLV V+N+PY + +PL+ K + G
Sbjct: 79 IPLLSELDDGSG---RLNIVEADALKVK--EADLVEGPAHLVSNLPYNVGTPLLIKWLTG 133
Query: 119 TKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDS 178
S + TL+ QKE A R++A PG+ + RLAV + VA+ VM + F P PKV S
Sbjct: 134 PWSPCALTLMFQKEVAERVVAQPGEDAYGRLAVISQAVAEARIVMHLPAAAFTPPPKVAS 193
Query: 179 SVVIIRPKAEIPDVN-LDEWRAFTRTCFSKKNKTLGATFKQ 218
+VV + P AE P + L T F ++ K L ++ KQ
Sbjct: 194 AVVHLVPLAERPAPDRLKRLERVTAAAFGQRRKMLRSSLKQ 234
>gi|428214092|ref|YP_007087236.1| dimethyladenosine transferase [Oscillatoria acuminata PCC 6304]
gi|428002473|gb|AFY83316.1| dimethyladenosine transferase [Oscillatoria acuminata PCC 6304]
Length = 279
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 135/254 (53%), Gaps = 30/254 (11%)
Query: 3 FFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDE 62
+ K QH L + + L+ IV ++++P D +LEIGPGTG LT +LL ++ V A+EID
Sbjct: 5 YPRKQFAQHWLQSDKALNEIVNAAALSPGDRILEIGPGTGILTRQLLSRAESVVAVEIDR 64
Query: 63 RMVEILNRRAAD--------SGFHDRLNVISKDALKTEFPQF----DLVVANIPYGISSP 110
+ + L ++ + + F D + +++ T+ P+ + VVANIPY I+ P
Sbjct: 65 NLSQKLAKKLGEIPNFLLLCADFLD----LDLESVLTQTPEHFHHPNKVVANIPYNITGP 120
Query: 111 LVAKLVYGT------KSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMD 164
++ KL+ GT S++S LL+QKE A R+ A+PG + L+V V+ VA+ E++
Sbjct: 121 ILEKLL-GTISQPPRMSYQSVVLLIQKEVAERINAAPGSRTYGALSVRVQYVAECEYICT 179
Query: 165 VSKRDFLPCPKVDSSVVIIRPKAEIPDVNLDEW-RAFTRTCFSKKNKTLGATFK------ 217
V + F P PKVDS+VV + P+ + W + FS K K L K
Sbjct: 180 VPAKAFYPAPKVDSAVVRLSPRPLALPADRPRWLETLVKVGFSSKRKMLRNNLKGLIDRD 239
Query: 218 QKKKVIELLRLSKQ 231
Q + +E L ++ Q
Sbjct: 240 QLTQFLEQLNINPQ 253
>gi|451979631|ref|ZP_21928046.1| Ribosomal RNA small subunit methyltransferase A [Nitrospina
gracilis 3/211]
gi|451763159|emb|CCQ89243.1| Ribosomal RNA small subunit methyltransferase A [Nitrospina
gracilis 3/211]
Length = 262
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 123/222 (55%), Gaps = 10/222 (4%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
+S GQ+ LT+ + + IV + I TV+EIGPG G LT LLE K+ A+EID ++
Sbjct: 5 RSLGQNFLTDPAIAEEIVAHAQIEDGGTVIEIGPGPGILTGLLLERCGKLIALEIDPKLC 64
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFD---LVVANIPYGISSPLVAKLVYGTKSF 122
+LN+R + + ++ +DAL ++ Q VV+N+PY + P++ +L++
Sbjct: 65 HLLNKRFKSN---PKFDLHQRDALVYDYSQAGGRFQVVSNLPYYAAMPILKRLIHYGSHI 121
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
+ TL+LQ+E RL+A PG ++ L V + +VE +M+V K++F P PKVDSSV+
Sbjct: 122 ANMTLMLQREVVDRLVAQPGSRDYGSLTVFTQFHCEVERIMEVGKKNFDPPPKVDSSVIR 181
Query: 183 IRPKAEIPDVNLDEWRAF---TRTCFSKKNKTLGATFKQKKK 221
+ P++ P V +D + F F K K L K K
Sbjct: 182 LVPRSA-PPVEVDNLKTFFHVVHAAFFHKRKMLKNNLKSLAK 222
>gi|161611309|ref|YP_007394.2| dimethyladenosine transferase [Candidatus Protochlamydia
amoebophila UWE25]
gi|62900537|sp|Q6ME80.2|RSMA_PARUW RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
Length = 284
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 121/226 (53%), Gaps = 13/226 (5%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
IF K Q+ L + ++ IVR S + P + VLEIGPG G+LT +LEV V A+E D
Sbjct: 18 IFPKKGLSQNFLIDGNIIRKIVRASDVQPGNLVLEIGPGPGSLTQAMLEVEAHVVAVEKD 77
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFP----------QFDLVVANIPYGISSPL 111
+ L R S +L + +D L Q V+AN+PY +++P+
Sbjct: 78 FVLARELKRFQTPS---KQLEIFCEDILMFSVEEELQSRLRDDQKAKVIANLPYHLTTPI 134
Query: 112 VAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFL 171
+A++V K F S T+++Q+E ARR+ A PG S+++ + + + + VS+ F
Sbjct: 135 LAEMVVRRKLFSSLTVMVQEEVARRMTALPGQSDYSSFTIFLNFYSKPRYGFTVSRNCFY 194
Query: 172 PCPKVDSSVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
P PKVDS++V++ K P+++ + TRT F ++ K L A+ K
Sbjct: 195 PAPKVDSAIVVLELKEPPPNIDAQVFFKITRTAFEQRRKMLRASLK 240
>gi|335357755|ref|ZP_08549625.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Lactobacillus animalis KCTC 3501]
Length = 298
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 125/221 (56%), Gaps = 15/221 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ LT+ +L+ IV + + P+D V+EIGPG G LT +L + + +V A+EID+R
Sbjct: 25 FKKSLGQNFLTDINILNKIVAAAEVTPEDDVIEIGPGIGALTEQLAKNAHQVMALEIDDR 84
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQ-----FD-----LVVANIPYGISSPLVA 113
++ +L A +D + V+ +D LK + + FD +VAN+PY I++P++
Sbjct: 85 LIPVLADTLAP---YDNVTVVHQDVLKADLVELIAKNFDGKHKIKLVANLPYYITTPIIL 141
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ F +++QKE A RL A PG ++ L+V V+ D + V K F+P
Sbjct: 142 HLLEAPVDFDRIVVMMQKEVADRLAAVPGTKDYGSLSVAVQYEMDAKVAFIVPKTVFIPQ 201
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTL 212
PKVDS+++++ KA +DE ++ + F + K+L
Sbjct: 202 PKVDSAIIVLEKKAVQTYRPVDEKFFKQMVKGIFLHRRKSL 242
>gi|424074235|ref|ZP_17811645.1| dimethyladenosine transferase [Pseudomonas syringae pv. avellanae
str. ISPaVe037]
gi|407994740|gb|EKG35299.1| dimethyladenosine transferase [Pseudomonas syringae pv. avellanae
str. ISPaVe037]
Length = 268
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 119/226 (52%), Gaps = 14/226 (6%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ H+++ GQ+ L + V+D I+R P+D +LEIGPG G LT LL+ ++ +E
Sbjct: 5 YQHRARKRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTEGLLDSGAQLDVVE 64
Query: 60 IDERMVEILNRRAADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLVA 113
+D+ ++ ILN + A N+ DALK +F P+ VV N+PY IS+PL+
Sbjct: 65 LDKDLIPILNGQFASK---PNFNLHQGDALKFDFNTLGAEPRSLRVVGNLPYNISTPLIF 121
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ R +LQKE R+ A PG ++ RL++ V+ VE + +V F P
Sbjct: 122 HLLQNASLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPP 181
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P +P D R F+++ KTL T K
Sbjct: 182 PKVDSAIVRLVPYETLPHPAKDHRVLERIVREAFNQRRKTLRNTLK 227
>gi|168333630|ref|ZP_02691890.1| dimethyladenosine transferase [Epulopiscium sp. 'N.t. morphotype
B']
Length = 283
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 139/249 (55%), Gaps = 22/249 (8%)
Query: 1 YIFFHKSK-GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
Y F K K GQ+ L ++ VL I+ ++I+ +D VLEIGPG G++T +LLE +++V A+E
Sbjct: 17 YPFILKKKYGQNFLIDEHVLTKIISAANISKNDCVLEIGPGIGSVTQELLEHAQEVIAVE 76
Query: 60 IDERMVEILNRRAADSGFHDRLNVISKDALKTEFPQF------DLVVANIPYGISSPLVA 113
ID+ ++ ILN + G +D +I++D LK + + VVAN+PY I++P++
Sbjct: 77 IDKELIPILNNQF---GSYDNFALINEDFLKLDLKEVLKGXTNIKVVANLPYYITTPIIM 133
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ F + T+++QKE A R+ A PG E+ ++ ++ A V V +V FLP
Sbjct: 134 ALLESELPFINITVMVQKEVADRITALPGTKEYGSISASIAYYAKVRLVANVPMHSFLPR 193
Query: 174 PKVDSSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTLGATF--------KQKKKV 222
P V+S+V+ + P V+L F R FS++ KT+ T KQ K +
Sbjct: 194 PTVNSAVIELELYRN-PPVDLKNKEVFFKVIRAAFSQRRKTILNTLSNNFNIDKKQLKNL 252
Query: 223 IELLRLSKQ 231
+E+ +++
Sbjct: 253 LEVADIAEN 261
>gi|18313918|ref|NP_560585.1| dimethyladenosine transferase [Pyrobaculum aerophilum str. IM2]
gi|27151587|sp|Q8ZTJ4.1|RSMA_PYRAE RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|18161487|gb|AAL64767.1| dimethyladenosine transferase [Pyrobaculum aerophilum str. IM2]
Length = 228
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 117/205 (57%), Gaps = 13/205 (6%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDT-VLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEI 67
QH L + V + I + + P V+E+GPG G LT+ L + SK V+AIEID+ + E
Sbjct: 7 AQHFLRDPSVAEYI---AGLVPSGLDVIEVGPGAGALTIPLAKRSKTVYAIEIDKALAER 63
Query: 68 LNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATL 127
L A + + +I DAL+ E+P+ D V+N+PY I+SPL+ KL+ + A L
Sbjct: 64 LRGIAPPN-----VVIIVGDALEVEWPRADFFVSNVPYSITSPLLFKLI---RHRLPAVL 115
Query: 128 LLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKA 187
+Q+E A RL+A PG ++ RL V V+ DVE + + F P PKV S+VV + PKA
Sbjct: 116 TIQREVAERLVARPGSEDYGRLTVAVQCFYDVEILRVLPPYVFDPPPKVYSAVVRLMPKA 175
Query: 188 EIPDVNLDEWRAFTRTCFSKKNKTL 212
D N DE+ F+ FS + KTL
Sbjct: 176 PCVD-NFDEFEKFSAWLFSARRKTL 199
>gi|254283714|ref|ZP_04958682.1| dimethyladenosine transferase [gamma proteobacterium NOR51-B]
gi|219679917|gb|EED36266.1| dimethyladenosine transferase [gamma proteobacterium NOR51-B]
Length = 265
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 113/224 (50%), Gaps = 14/224 (6%)
Query: 5 HKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
HK + GQ+ L +Q V+D+I + + P D ++EIGPG G LT L+ AIE+D
Sbjct: 11 HKPRKRFGQNFLRDQSVIDAIAQAINPQPGDHLVEIGPGEGALTQALISTECAYDAIELD 70
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL------VVANIPYGISSPLVAKL 115
+ +L A + + S DAL +F Q + VV N+PY IS+PL+ KL
Sbjct: 71 RDLTAVL---LASFSIYSNFALHSADALNFDFSQLRVSEEKLRVVGNLPYNISTPLIFKL 127
Query: 116 VYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPK 175
+ R +LQ E +RL A+PG + R+ V + + V ++DV F P PK
Sbjct: 128 LENIDIIRDMHFMLQLEVVQRLSAAPGSKHWGRVGVMAQYLCQVTHLIDVPPESFYPAPK 187
Query: 176 VDSSVVIIRPKAEIPDVNLD--EWRAFTRTCFSKKNKTLGATFK 217
V S+VV +RP P D R TR F+++ KTL FK
Sbjct: 188 VQSAVVSLRPHHSSPYKACDPVALRTVTRHAFAQRRKTLRNNFK 231
>gi|398997172|ref|ZP_10700002.1| dimethyladenosine transferase [Pseudomonas sp. GM21]
gi|398124665|gb|EJM14171.1| dimethyladenosine transferase [Pseudomonas sp. GM21]
Length = 272
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 120/227 (52%), Gaps = 16/227 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ HK++ GQ+ L + V+D I+R +D VLEIGPG G LT LL ++ +E
Sbjct: 5 YQHKARKRFGQNFLHDAGVIDRILRSIHAKTEDRVLEIGPGQGALTQGLLNSGAQLDVVE 64
Query: 60 IDERMVEILNRR-AADSGFHDRLNVISKDALKTEFPQFDL------VVANIPYGISSPLV 112
+D+ +V ILN++ A S F ++ DALK +F + VV N+PY IS+PL+
Sbjct: 65 LDKDLVPILNQQFAGKSNF----SLHQGDALKFDFTSLNAAPGSLRVVGNLPYNISTPLI 120
Query: 113 AKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
L++ R +LQKE R+ A PG ++ RL++ V+ VE + +V F P
Sbjct: 121 FHLLHNASLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNP 180
Query: 173 CPKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P +P D R F+++ KTL T K
Sbjct: 181 PPKVDSAIVRLVPHTVLPHPAKDHKLLERVVREAFNQRRKTLRNTLK 227
>gi|374578774|ref|ZP_09651868.1| dimethyladenosine transferase [Desulfosporosinus youngiae DSM
17734]
gi|374414856|gb|EHQ87291.1| dimethyladenosine transferase [Desulfosporosinus youngiae DSM
17734]
Length = 274
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 121/219 (55%), Gaps = 12/219 (5%)
Query: 5 HKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERM 64
HKS GQ+ L + V++ I+ S++ PD ++EIGPG G LT L +K+ A+E+D+
Sbjct: 19 HKSLGQNFLISDEVIEHIISASTLQPDVPLVEIGPGLGVLTRVLAPQVEKMWAVELDDHK 78
Query: 65 VEILNRRAADSGFHDRLNVISKDALKTEF-----PQFDLVVANIPYGISSPLVAKLVYGT 119
+ ILN+ + +I +DALK + + ++ N+PY I+SPL+ +
Sbjct: 79 ISILNKELKGH----PIELIHQDALKLDLKDLWGEKMGYLIGNLPYYITSPLIMHFLEQE 134
Query: 120 KSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSS 179
K R T+++QKE A R+ ASPG + L++ V++ A V VMDV F P PKV S+
Sbjct: 135 KQLRGMTIMVQKEVADRIAASPGSKTYGILSIAVQISARVTKVMDVLPSAFWPAPKVTSA 194
Query: 180 VVIIRPKAEIP--DVNLDEWRAFTRTCFSKKNKTLGATF 216
V+ + P D+N ++ + FS++ KTLG +
Sbjct: 195 VIRLD-LCSYPGFDMNRKDFFRVVKAAFSQRRKTLGNSL 232
>gi|289676165|ref|ZP_06497055.1| dimethyladenosine transferase [Pseudomonas syringae pv. syringae
FF5]
gi|440721016|ref|ZP_20901426.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae BRIP34876]
gi|440727217|ref|ZP_20907456.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae BRIP34881]
gi|443641949|ref|ZP_21125799.1| Dimethyladenosine transferase [Pseudomonas syringae pv. syringae
B64]
gi|440364411|gb|ELQ01543.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae BRIP34881]
gi|440364789|gb|ELQ01911.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae BRIP34876]
gi|443281966|gb|ELS40971.1| Dimethyladenosine transferase [Pseudomonas syringae pv. syringae
B64]
Length = 268
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 119/226 (52%), Gaps = 14/226 (6%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ H+++ GQ+ L + V+D I+R P+D +LEIGPG G LT LL+ ++ +E
Sbjct: 5 YQHRARKRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTEGLLDSGAQLDVVE 64
Query: 60 IDERMVEILNRRAADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLVA 113
+D+ ++ ILN + A N+ DALK +F P+ VV N+PY IS+PL+
Sbjct: 65 LDKDLIPILNGQFASK---PNFNLHQGDALKFDFNTLGAEPRSLRVVGNLPYNISTPLIF 121
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ R +LQKE R+ A PG ++ RL++ V+ VE + +V F P
Sbjct: 122 HLLQNASLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPP 181
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P +P D R F+++ KTL T K
Sbjct: 182 PKVDSAIVRLVPYETLPHPAKDHRVLERIVREAFNQRRKTLRNTLK 227
>gi|375091005|ref|ZP_09737311.1| dimethyladenosine transferase [Helcococcus kunzii ATCC 51366]
gi|374564796|gb|EHR36077.1| dimethyladenosine transferase [Helcococcus kunzii ATCC 51366]
Length = 288
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 122/218 (55%), Gaps = 12/218 (5%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K GQ+ L + +V+ +I + I+ +D VLEIGPG G LT +LL +KKV A+E+DER
Sbjct: 23 FSKGLGQNFLIDGKVVRAISEGAKISAEDNVLEIGPGFGTLTEELLLKAKKVVAVELDER 82
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL---------VVANIPYGISSPLVAK 114
+ +L++ G D +++ D LK + Q VVAN+PY I++P++
Sbjct: 83 LNVVLSQTV---GHFDNFVLVNADILKADLKQLVSDQFGDEPFKVVANLPYYITTPIIEL 139
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
+ + +S T ++QKE R+LA+PG+ + L V V + V+ K F+P P
Sbjct: 140 FLESELNVKSLTFMVQKEVGDRILANPGNKIYGSLTVFVNFYSVPSLVVKAPKEIFMPRP 199
Query: 175 KVDSSVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTL 212
KVDS V+ + K ++PDV+ ++ R F+K+ K L
Sbjct: 200 KVDSVVINLEMKEKLPDVDKIKFFKLMRGGFTKRRKNL 237
>gi|119485101|ref|ZP_01619486.1| dimethyladenosine transferase [Lyngbya sp. PCC 8106]
gi|119457329|gb|EAW38454.1| dimethyladenosine transferase [Lyngbya sp. PCC 8106]
Length = 273
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 129/251 (51%), Gaps = 25/251 (9%)
Query: 3 FFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDE 62
+ K QH L + L+ IV + ++ DD +LEIGPGTG LT +LL +++ V A+EID
Sbjct: 3 YPRKQFAQHWLRSPTALNQIVNAAQLSTDDHLLEIGPGTGVLTERLLTLAQTVLAVEIDR 62
Query: 63 RMVEILNRRAADSGFHDRLNVISKDALK-------TEFPQF---DLVVANIPYGISSPLV 112
+ + L G D ++ D L +FP F + VVANIPY I+ P++
Sbjct: 63 DLCKKL---VPKFGKRDNFLLLQGDILTLRLEDYLQDFPNFQNPNKVVANIPYNITGPIL 119
Query: 113 AKLVYG-----TKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSK 167
KL+ + + LL+QKE A+RL A PG F L+V V+ +A EF+ DV
Sbjct: 120 EKLLGNIAQPNPQPYDLMVLLVQKEVAQRLCAGPGSRTFGALSVRVQYLAKCEFICDVPS 179
Query: 168 RDFLPCPKVDSSVVIIRPKA-EIPDVNLDEWRAFTRTCFSKKNKTLGATFK------QKK 220
+ F P PKVDS+VV +RP+ E P + + F+ K K L + Q
Sbjct: 180 KAFYPPPKVDSAVVRLRPRCIEYPAESPKHLEMAVKLGFASKRKMLRNNLQSVIDRDQLT 239
Query: 221 KVIELLRLSKQ 231
+++E L ++ Q
Sbjct: 240 QILEQLEVNPQ 250
>gi|15612620|ref|NP_240923.1| dimethyladenosine transferase [Bacillus halodurans C-125]
gi|27151607|sp|Q9KGK4.1|RSMA_BACHD RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|10172669|dbj|BAB03776.1| dimethyladenosine transferase [Bacillus halodurans C-125]
Length = 289
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 123/222 (55%), Gaps = 17/222 (7%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + VL +IV +S+ P +EIGPG G LT +L +K+V A EID+R
Sbjct: 22 FKKSLGQNFLIDPNVLRNIVDVASLTPQSGAIEIGPGIGALTEQLARQAKRVVAFEIDQR 81
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQ-----FD-----LVVANIPYGISSPLVA 113
++ +L A ++ + VI++D LK + Q F+ +VVAN+PY +++P++
Sbjct: 82 LIPVLRETLAP---YENVTVINEDVLKADVKQVIATTFEEGQDLMVVANLPYYVTTPILM 138
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
KL+ R +++Q E A R+ A PG E+ L++ + A E + V K F+P
Sbjct: 139 KLLEAKLPVRGIVVMIQAEVADRIAAKPGTKEYGSLSIAAQYYATAELAVKVPKTVFVPQ 198
Query: 174 PKVDSSV--VIIRPKAEIPDVNLDEWR-AFTRTCFSKKNKTL 212
P VDS+V + IR K + V +EW A R F+ + KT+
Sbjct: 199 PNVDSAVLRLTIREKPPV-TVADEEWLFAIVRASFANRRKTI 239
>gi|313884585|ref|ZP_07818346.1| dimethyladenosine transferase [Eremococcus coleocola
ACS-139-V-Col8]
gi|312620369|gb|EFR31797.1| dimethyladenosine transferase [Eremococcus coleocola
ACS-139-V-Col8]
Length = 296
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 125/231 (54%), Gaps = 21/231 (9%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I KS GQ+ L +LD +V + I+ D TV+EIGPG G LT L +K+V A EID
Sbjct: 22 IAMKKSLGQNFLIEPNILDKMVAAADIDSDTTVIEIGPGIGALTEFLALSAKQVLAFEID 81
Query: 62 ERMVEIL-NRRAADSGFHDRLNVISKDALKTEF--PQF----DL----VVANIPYGISSP 110
R V IL N AA +D + VI +D LK +F P++ DL VVAN+PY I++P
Sbjct: 82 ARFVSILENTLAA----YDNVKVIHQDILKVDFQAPEYASLKDLDRLVVVANLPYYITTP 137
Query: 111 LVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDF 170
++ L+ F +++QKE A R+ A G +N L + ++L V K F
Sbjct: 138 IIMHLIDSHLPFDRLVMMMQKEVAERMTAQVGTKAYNSLTIAIQLQMQARLDFIVPKNVF 197
Query: 171 LPCPKVDSSVVIIR----PKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
+P P VDS+V+++ P+ ++ D L +++ F + F + KTL +K
Sbjct: 198 IPKPNVDSAVLVLERLATPRLDLAD--LSDFQNFVQAAFVYRRKTLWNNYK 246
>gi|422673107|ref|ZP_16732468.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. aceris str. M302273]
gi|330970842|gb|EGH70908.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. aceris str. M302273]
Length = 268
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 119/226 (52%), Gaps = 14/226 (6%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ H+++ GQ+ L + V+D I+R P+D +LEIGPG G LT LL+ ++ +E
Sbjct: 5 YQHRARKRFGQNFLHDAGVIDKILRAIRARPEDRLLEIGPGQGALTEGLLDSGAQLDVVE 64
Query: 60 IDERMVEILNRRAADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLVA 113
+D+ ++ ILN + A N+ DALK +F P+ VV N+PY IS+PL+
Sbjct: 65 LDKDLIPILNGQFASK---PNFNLHQGDALKFDFNTLGAEPRSLRVVGNLPYNISTPLIF 121
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ R +LQKE R+ A PG ++ RL++ V+ VE + +V F P
Sbjct: 122 HLLQNASLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPP 181
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P +P D R F+++ KTL T K
Sbjct: 182 PKVDSAIVRLVPYETLPHPAKDHRVLERIVREAFNQRRKTLRNTLK 227
>gi|448409534|ref|ZP_21574748.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halosimplex carlsbadense 2-9-1]
gi|445672880|gb|ELZ25449.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halosimplex carlsbadense 2-9-1]
Length = 306
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 114/211 (54%), Gaps = 10/211 (4%)
Query: 7 SKGQHILTNQRVLDSIVRKSS-INPD-DTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERM 64
++ QH L + RVLD + ++ N D VLEIG GTG LT +LL ++V AIE D +
Sbjct: 44 NRDQHFLVDDRVLDRLPEYAAEANVDLSHVLEIGAGTGALTDRLLAAGERVTAIERDPDL 103
Query: 65 VEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRS 124
L A RL V+ DAL+ E P+F V+N+PYG SS L +L+ R
Sbjct: 104 AAFLRDEFAAEIDDGRLTVVEGDALEVELPEFTASVSNLPYGPSSELAFRLL---PEKRP 160
Query: 125 ATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIR 184
L+ Q+EFA R+ A PG ++ RL+V AD E V V K F P P V S+VV
Sbjct: 161 LVLMFQREFAERMAAEPGTDDYGRLSVTAGHYADAEVVEPVPKEAFSPPPAVQSAVVRTT 220
Query: 185 PKAEIPDVNLDE---WRAFTRTCFSKKNKTL 212
P+ PD +D+ + AF + F+++ KT+
Sbjct: 221 PR--DPDYEVDDEDFFMAFLKAVFTQRRKTM 249
>gi|325177054|emb|CCA21009.1| dimethyladenosine transferase putative [Albugo laibachii Nc14]
Length = 323
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/241 (39%), Positives = 129/241 (53%), Gaps = 30/241 (12%)
Query: 9 GQHILTNQRVLDSIVRKSSI---------NPDDT----VLEIGPGTGNLTLKLLEV--SK 53
GQH+L + V+ SI++ + N + VLEIG GTGNLT LL+V +
Sbjct: 21 GQHLLVSNDVIASIIKAADFPSLLLQKAGNQTEERRIRVLEIGSGTGNLTAALLDVDPTI 80
Query: 54 KVHAIEIDERMVEILNRRAAD----SGFHDRLNVISKDALKTEFPQ----FDLVVANIPY 105
+VH +E D MV+ L R S +N I K L F D VVANIPY
Sbjct: 81 QVHGVECDASMVKSLEDRFPSQLRTSQLQLHVNRIEKLRLSDLFSSSQGLIDAVVANIPY 140
Query: 106 GISSPLVAKLV-YGTK---SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEF 161
+SS ++A+LV Y K S + LLLQ+EFA+R+LA+P + + RLAVN LV V+
Sbjct: 141 QLSSLIIARLVSYLHKYPGSVKCIILLLQEEFAQRMLATPHNQNYGRLAVNTSLVGHVDA 200
Query: 162 VMDVSKRDFLPCPKVDSSVVIIRPKAE--IPDVN-LDEWRAFTRTCFSKKNKTLGATFKQ 218
++ V F+P P+VDS V+ + P I D + L E+ A R CF +KNKTL A
Sbjct: 201 LLKVGPEVFIPRPQVDSRVIKVTPHFPRFIRDPSFLREFDALLRICFLRKNKTLRALLTS 260
Query: 219 K 219
K
Sbjct: 261 K 261
>gi|424068226|ref|ZP_17805682.1| dimethyladenosine transferase [Pseudomonas syringae pv. avellanae
str. ISPaVe013]
gi|407998608|gb|EKG39012.1| dimethyladenosine transferase [Pseudomonas syringae pv. avellanae
str. ISPaVe013]
Length = 268
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 119/226 (52%), Gaps = 14/226 (6%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ H+++ GQ+ L + V+D I+R P+D +LEIGPG G LT LL+ ++ +E
Sbjct: 5 YQHRARKRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTEGLLDSGAQLDVVE 64
Query: 60 IDERMVEILNRRAADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLVA 113
+D+ ++ ILN + A N+ DALK +F P+ VV N+PY IS+PL+
Sbjct: 65 LDKDLIPILNGQFASK---PNFNLHQGDALKFDFNTLGAEPRSLRVVGNLPYNISTPLIF 121
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ R +LQKE R+ A PG ++ RL++ V+ VE + +V F P
Sbjct: 122 HLLQSASLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPP 181
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P +P D R F+++ KTL T K
Sbjct: 182 PKVDSAIVRLVPYETLPHPAKDHRVLERIVREAFNQRRKTLRNTLK 227
>gi|363889336|ref|ZP_09316699.1| dimethyladenosine transferase [Eubacteriaceae bacterium CM5]
gi|363893052|ref|ZP_09320192.1| dimethyladenosine transferase [Eubacteriaceae bacterium CM2]
gi|402838006|ref|ZP_10886521.1| dimethyladenosine transferase [Eubacteriaceae bacterium OBRC8]
gi|361961783|gb|EHL14962.1| dimethyladenosine transferase [Eubacteriaceae bacterium CM2]
gi|361966759|gb|EHL19646.1| dimethyladenosine transferase [Eubacteriaceae bacterium CM5]
gi|402274437|gb|EJU23621.1| dimethyladenosine transferase [Eubacteriaceae bacterium OBRC8]
Length = 288
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 122/220 (55%), Gaps = 18/220 (8%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS GQ+ L N+ +L+ I+ + I DD VLEIG G G LT KL E +K+V A+EID+ ++
Sbjct: 24 KSLGQNFLINENILNEIIEAADITKDDVVLEIGTGIGTLTSKLCERAKRVVAVEIDKNLL 83
Query: 66 EILNRRAADSGFHDRLNVISKDALKTE---------FPQFDLVVANIPYGISSPLVAKLV 116
ILN + + +++I+KD LKT+ Q VVAN+PY I++P++ K++
Sbjct: 84 PILNETLS---AYQNIDIINKDILKTDINEELKSLGINQKVKVVANLPYYITTPIIMKIL 140
Query: 117 YGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKV 176
+ L+LQKE A R+ A ++ L++ V+ D + + V K F+P P V
Sbjct: 141 EENVNVSVMVLMLQKEVANRINAQHSTKDYGSLSIAVQYYCDTQIICKVPKNSFIPEPNV 200
Query: 177 DSSVVII----RPKAEIPDVNLDEWRAFTRTCFSKKNKTL 212
DS V+ + + K EI D L + R F+K+ KT+
Sbjct: 201 DSLVIKLTVNEKRKVEIEDEEL--FFKLVRGSFAKRRKTI 238
>gi|66047854|ref|YP_237695.1| dimethyladenosine transferase [Pseudomonas syringae pv. syringae
B728a]
gi|75500351|sp|Q4ZMG5.1|RSMA_PSEU2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|63258561|gb|AAY39657.1| dimethyladenosine transferase [Pseudomonas syringae pv. syringae
B728a]
Length = 268
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 119/226 (52%), Gaps = 14/226 (6%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ H+++ GQ+ L + V+D I+R P+D +LEIGPG G LT LL+ ++ +E
Sbjct: 5 YQHRARKRFGQNFLHDAGVIDKILRAIRARPEDRLLEIGPGQGALTEGLLDSGAQLDVVE 64
Query: 60 IDERMVEILNRRAADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLVA 113
+D+ ++ ILN + A N+ DALK +F P+ VV N+PY IS+PL+
Sbjct: 65 LDKDLIPILNGQFASK---PNFNLHQGDALKFDFNTLGADPRSLRVVGNLPYNISTPLIF 121
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ R +LQKE R+ A PG ++ RL++ V+ VE + +V F P
Sbjct: 122 HLLQNASLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPP 181
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P +P D R F+++ KTL T K
Sbjct: 182 PKVDSAIVRLVPYETLPHPAKDHRVLERIVREAFNQRRKTLRNTLK 227
>gi|309808503|ref|ZP_07702402.1| dimethyladenosine transferase [Lactobacillus iners LactinV 01V1-a]
gi|308168331|gb|EFO70450.1| dimethyladenosine transferase [Lactobacillus iners LactinV 01V1-a]
Length = 295
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 128/233 (54%), Gaps = 18/233 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+F K+K GQ+ L + ++ IV + + V+EIGPG G+LT +LL KV A E
Sbjct: 20 YFMKAKKSLGQNFLVDLPIVKKIVASAGVVEGSQVIEIGPGIGSLTEQLLLAGAKVLAYE 79
Query: 60 IDERMVEIL-NRRAADSG---FHDRLNVISKDALKTEFPQ-----FD-----LVVANIPY 105
+D + +IL N A G +DR +I KD LK +F FD +VVAN+PY
Sbjct: 80 VDPDLPDILYNELPAQIGNYELNDRFRIIMKDILKADFATDIADYFDVNRPIIVVANLPY 139
Query: 106 GISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDV 165
I++P++ KL++ TL++QKE A R+ A+ + L + VK DV+F +V
Sbjct: 140 YITTPIILKLMHSPIKISQLTLMMQKEVAERISAAHKSKAYGPLTIAVKKDMDVDFAFEV 199
Query: 166 SKRDFLPCPKVDSSVVIIRP-KAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
+ F+P PKVDS+VV+++P + ++ + D + + FS++ KTL K
Sbjct: 200 KRTSFMPSPKVDSAVVVLKPLEHKLLIEHEDLFNQIVKLAFSQRRKTLNNNLK 252
>gi|427713431|ref|YP_007062055.1| dimethyladenosine transferase [Synechococcus sp. PCC 6312]
gi|427377560|gb|AFY61512.1| dimethyladenosine transferase [Synechococcus sp. PCC 6312]
Length = 287
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 123/231 (53%), Gaps = 25/231 (10%)
Query: 5 HKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERM 64
K GQH L + RVL I++ ++ P+D VLEIGPGTG LT LL + +V ++E+D
Sbjct: 5 QKRFGQHWLQSSRVLGKILQAGALTPEDHVLEIGPGTGVLTRPLLAAAGQVTSVEVDRDA 64
Query: 65 VEILNRRAADSGFHDRLNVISKDALKTEF-----PQFDLVVANIPYGISSPLVAKLVYGT 119
+ L H N+I D LK + P+ + VVANIPY I+ P++ KL+ GT
Sbjct: 65 YQALTTTLT----HPNWNLILADFLKLDLAALPDPKPNKVVANIPYNITGPILIKLL-GT 119
Query: 120 KS------FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
S F S LL Q E A R+LASP D + L++ V+ +A E + V F P
Sbjct: 120 ISHPQALPFESLVLLTQAEVASRILASPADKAYGALSLRVQYLAKPEKICHVPPTAFFPP 179
Query: 174 PKVDSSVVIIRPKA-----EIPDVNLDEWRAFTRTCFSKKNKTLGATFKQK 219
PKVDS+V+ + P+A + P + LDE + F+ + K L T K +
Sbjct: 180 PKVDSTVIRLTPQAPPIPCDCPPL-LDE---LIQLGFATRRKMLINTLKGR 226
>gi|329920627|ref|ZP_08277314.1| dimethyladenosine transferase [Lactobacillus iners SPIN 1401G]
gi|328935885|gb|EGG32345.1| dimethyladenosine transferase [Lactobacillus iners SPIN 1401G]
Length = 295
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 128/233 (54%), Gaps = 18/233 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+F K+K GQ+ L + ++ IV + + V+EIGPG G+LT +LL KV A E
Sbjct: 20 YFMKAKKSLGQNFLVDLPIVKKIVASAGVVEGSQVIEIGPGIGSLTEQLLLAGAKVLAYE 79
Query: 60 IDERMVEIL-NRRAADSG---FHDRLNVISKDALKTEFPQ-----FD-----LVVANIPY 105
+D + +IL N A G +DR +I KD LK +F FD +VVAN+PY
Sbjct: 80 VDPDLPDILYNELPAQIGNYELNDRFRIIMKDILKADFATDIADYFDVNQPIIVVANLPY 139
Query: 106 GISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDV 165
I++P++ KL++ TL++QKE A R+ A+ + L + VK DV+F +V
Sbjct: 140 YITTPIILKLMHSPIKISQLTLMMQKEVAERISAAHKSKAYGPLTIAVKKDMDVDFAFEV 199
Query: 166 SKRDFLPCPKVDSSVVIIRP-KAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
+ F+P PKVDS+VV+++P + ++ + D + + FS++ KTL K
Sbjct: 200 KRTSFMPSPKVDSAVVVLKPLEHKLLIEHEDLFNQIVKLAFSQRRKTLNNNLK 252
>gi|422618520|ref|ZP_16687217.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. japonica str. M301072]
gi|330898897|gb|EGH30316.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. japonica str. M301072]
Length = 268
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 119/226 (52%), Gaps = 14/226 (6%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ H+++ GQ+ L + V+D I+R P+D +LEIGPG G LT LL+ ++ +E
Sbjct: 5 YQHRARKRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTEGLLDSGAQLDVVE 64
Query: 60 IDERMVEILNRRAADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLVA 113
+D+ ++ ILN + A N+ DALK +F P+ VV N+PY IS+PL+
Sbjct: 65 LDKDLIPILNGQFASK---PNFNLHQGDALKFDFNTLGAEPRSLRVVGNLPYNISTPLIF 121
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ R +LQKE R+ A PG ++ RL++ V+ VE + +V F P
Sbjct: 122 HLLQNASLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPP 181
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P +P D R F+++ KTL T K
Sbjct: 182 PKVDSAIVRLVPYETLPHPAKDHRVLERIVREAFNQRRKTLRNTLK 227
>gi|389793096|ref|ZP_10196271.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Rhodanobacter fulvus Jip2]
gi|388435011|gb|EIL91932.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Rhodanobacter fulvus Jip2]
Length = 262
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 112/223 (50%), Gaps = 13/223 (5%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS GQH L + R +D IV + D VLEIGPG G LTL LL + K+ AIE+D ++
Sbjct: 7 KSFGQHFLHDSRYIDRIVSAMAPRATDFVLEIGPGEGALTLPLLTAAGKLTAIELDTDLI 66
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDL--------VVANIPYGISSPLVAKLVY 117
L RAA G L +I D LK +F + N+PY ISSP++ V
Sbjct: 67 PALQVRAASVG---ELQIIHADVLKVDFTALAQRHGVDRLRIAGNLPYYISSPILFHCVE 123
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
+ +LQKE R+ A PG + RL+V ++L VE + V F P PKV+
Sbjct: 124 HFGAIADMHFMLQKEVVERMAAEPGSKVYGRLSVMLQLACRVEPLFTVPPEAFRPPPKVE 183
Query: 178 SSVVIIRPKAEIPDVNLDEWRAFT--RTCFSKKNKTLGATFKQ 218
S+VV + P A + D +T + F+++ KTL KQ
Sbjct: 184 SAVVRLVPLAPQDRHDADAGDVYTVVKAAFAQRRKTLNNALKQ 226
>gi|292659595|pdb|3GRR|A Chain A, Crystal Structure Of The Complex Between S-Adenosyl
Homocysteine And Methanocaldococcus Jannaschi Dim1.
gi|292659596|pdb|3GRU|A Chain A, Crystal Structure Of The Complex Between Amp And
Methanocaldococcus Jannaschi Dim1
gi|292659597|pdb|3GRV|A Chain A, Crystal Structure Of The Complex Between Adenosine And
Methanocaldococcus Jannaschi Dim1
gi|292659598|pdb|3GRY|A Chain A, Crystal Structure Of The Complex Between S-Adenosyl
Methionine And Methanocaldococcus Jannaschi Dim1
Length = 295
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 121/210 (57%), Gaps = 8/210 (3%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQ L ++ ++ V +++ DD VLEIG G G LT +L + +KKV+ IEID+ +
Sbjct: 26 KKLGQCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLE 85
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDL--VVANIPYGISSPLVAKLVYGTKSFR 123
N+ ++ + +I DALK + + D VVAN+PY ISSP+ KL+ + F
Sbjct: 86 PYANKLKE---LYNNIEIIWGDALKVDLNKLDFNKVVANLPYQISSPITFKLI--KRGFD 140
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A L+ Q EFA+R++A+ G ++ RL+V V+ ADVE V V F P PKV S++V I
Sbjct: 141 LAVLMYQYEFAKRMVAAAGTKDYGRLSVAVQSRADVEIVAKVPPSAFYPKPKVYSAIVKI 200
Query: 184 RP-KAEIPDVNLDEWRAFTRTCFSKKNKTL 212
+P K + N + + F R F +NK++
Sbjct: 201 KPNKGKYHIENENFFDDFLRAIFQHRNKSV 230
>gi|254416619|ref|ZP_05030370.1| dimethyladenosine transferase [Coleofasciculus chthonoplastes PCC
7420]
gi|196176585|gb|EDX71598.1| dimethyladenosine transferase [Coleofasciculus chthonoplastes PCC
7420]
Length = 283
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 119/229 (51%), Gaps = 19/229 (8%)
Query: 5 HKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERM 64
HK QH L +++ L+ I+ + + P D +LEIGPGTG LT +LL + + A+EID
Sbjct: 6 HKQFAQHWLRSEKALNQIITAAKLQPRDRLLEIGPGTGVLTRRLLGEVESLVAVEIDR-- 63
Query: 65 VEILNRRAADSGFHDRLNVISKDALK-------TEFPQF---DLVVANIPYGISSPLVAK 114
++ R G ++ ++ D L FP F + VVANIPY I+ P++
Sbjct: 64 -DLCQRLVKSLGQNENFLLLQGDILSLNLAEHLAAFPHFQSPNKVVANIPYNITGPILQT 122
Query: 115 LVYG-----TKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRD 169
L+ T +F LL+QKE A+RL A PG F L+V V+ +AD +++ DV
Sbjct: 123 LLGTIAQPITPAFELIVLLVQKEVAQRLCAKPGSKAFGALSVRVQYLADCDWICDVPAIA 182
Query: 170 FLPCPKVDSSVVIIRPKAEIPDV-NLDEWRAFTRTCFSKKNKTLGATFK 217
F P PKVDS+VV +RP+ P N + + F+ K K L K
Sbjct: 183 FSPPPKVDSAVVRLRPRIVDPSADNPQQLETLVKLGFASKRKMLRNNLK 231
>gi|329850882|ref|ZP_08265727.1| dimethyladenosine transferase [Asticcacaulis biprosthecum C19]
gi|328841197|gb|EGF90768.1| dimethyladenosine transferase [Asticcacaulis biprosthecum C19]
Length = 275
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 120/224 (53%), Gaps = 15/224 (6%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVH--AIEIDER 63
K+ GQH L + + IVR DTV+E+GPG G LT LLE S+ H A+E D R
Sbjct: 20 KAFGQHFLLDLNITRKIVRLGGPFDGDTVIEVGPGPGGLTRALLE-SEAAHVIAVEKDSR 78
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQF---------DLVVANIPYGISSPLVAK 114
+E+L + F DR VI DALK + Q +V+N+PY + +PL+ K
Sbjct: 79 FLELLGE--LNEVFGDRFEVIEGDALKVDEAQLLADRKLSPQAHIVSNLPYNVGTPLLIK 136
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
+ G +S TL+ Q E A R++A GD ++ RL+V +++ D +MD+ R F P P
Sbjct: 137 WLTGPWRPKSLTLMFQLEVALRVVAPVGDDDYGRLSVISQILCDASKIMDLPARAFTPPP 196
Query: 175 KVDSSVVIIRPKAEIP-DVNLDEWRAFTRTCFSKKNKTLGATFK 217
+VDS+VV + PKA+ P + T F ++ K L ++ K
Sbjct: 197 RVDSAVVRLIPKADRPAPAVIKNLEKVTAAAFGQRRKMLRSSLK 240
>gi|392963272|ref|ZP_10328698.1| Ribosomal RNA small subunit methyltransferase A [Pelosinus
fermentans DSM 17108]
gi|421056830|ref|ZP_15519747.1| dimethyladenosine transferase [Pelosinus fermentans B4]
gi|421059750|ref|ZP_15522312.1| Ribosomal RNA small subunit methyltransferase A [Pelosinus
fermentans B3]
gi|421065070|ref|ZP_15526873.1| Ribosomal RNA small subunit methyltransferase A [Pelosinus
fermentans A12]
gi|421069349|ref|ZP_15530521.1| Ribosomal RNA small subunit methyltransferase A [Pelosinus
fermentans A11]
gi|392438010|gb|EIW15872.1| dimethyladenosine transferase [Pelosinus fermentans B4]
gi|392450369|gb|EIW27422.1| Ribosomal RNA small subunit methyltransferase A [Pelosinus
fermentans A11]
gi|392451096|gb|EIW28090.1| Ribosomal RNA small subunit methyltransferase A [Pelosinus
fermentans DSM 17108]
gi|392458395|gb|EIW34932.1| Ribosomal RNA small subunit methyltransferase A [Pelosinus
fermentans B3]
gi|392459757|gb|EIW36136.1| Ribosomal RNA small subunit methyltransferase A [Pelosinus
fermentans A12]
Length = 280
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 130/242 (53%), Gaps = 19/242 (7%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I K GQ+ L ++ V+ SIV+ ++I DD VLEIGPG G LT L E V A+EID
Sbjct: 21 IRMSKKLGQNFLIDEHVVQSIVKAANITQDDAVLEIGPGIGTLTQGLAEAGAAVTAVEID 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLVAKL 115
R++E+L + ++ + V+ D L+ + P++ VVAN+PY I++P++ L
Sbjct: 81 RRLIEVLAKTLEG---YENIRVVHGDILRIDIGKEVAAPRYK-VVANLPYYITTPIIMGL 136
Query: 116 VYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPK 175
+ ++QKE A+R++A PG ++ L+V V+ E + V F+P P
Sbjct: 137 LEAHMPVDILVTMVQKEVAQRMVAVPGTKDYGSLSVAVQYYTKPEIMFIVPPASFIPPPA 196
Query: 176 VDSSVV--IIRPKAEIPDVNLDEWRAFTR---TCFSKKNKTLGATFKQKKKVIELLRLSK 230
VDS+V+ +R K P V ++E R F R F+++ KTL T K E L++
Sbjct: 197 VDSAVIRCTVREK---PPVEVNE-RIFFRVVKAAFAQRRKTLSNTLKTTGVPAETLKVIL 252
Query: 231 QK 232
+K
Sbjct: 253 EK 254
>gi|374307434|ref|YP_005053865.1| dimethyladenosine transferase [Filifactor alocis ATCC 35896]
gi|320120297|gb|EFE28598.2| dimethyladenosine transferase [Filifactor alocis ATCC 35896]
Length = 286
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 124/218 (56%), Gaps = 11/218 (5%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + +L IV + I +D V+E+G G G LT +L + +KKV+AIEID++
Sbjct: 22 FTKSLGQNFLVDTNILQKIVDSADIQEEDIVIEVGTGIGTLTRELAKRAKKVYAIEIDKK 81
Query: 64 MVEIL-----NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYG 118
++ I+ N D D L V+ +D ++ + + V+ANIPY I++P++ K +
Sbjct: 82 LIPIVKETTSNYNNIDFVNMDFLEVVLEDLIQEKDRKIK-VIANIPYYITTPIIMKCLES 140
Query: 119 TKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDS 178
+ + L++QKE A RL A P + L+V V+ +DVEFV VSK F P PKVDS
Sbjct: 141 SLDISTILLMIQKEVADRLSAEPSTKAYGSLSVAVQYYSDVEFVGKVSKSCFYPQPKVDS 200
Query: 179 SVVIIRPKAE---IPDVNLDEWRAFTRTCFSKKNKTLG 213
+V + K E + D L + ++ F+K+ KT+
Sbjct: 201 GIVKLSKKHEYIFVRDRKL--FSQVVKSAFAKRRKTIS 236
>gi|422296567|ref|ZP_16384234.1| dimethyladenosine transferase [Pseudomonas avellanae BPIC 631]
gi|407992251|gb|EKG33924.1| dimethyladenosine transferase [Pseudomonas avellanae BPIC 631]
Length = 268
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 118/226 (52%), Gaps = 14/226 (6%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
F H+++ GQ+ L + V+D I+R P+D +LEIGPG G LT LL ++ +E
Sbjct: 5 FQHRARKRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTEGLLGSGAQLDVVE 64
Query: 60 IDERMVEILNRRAADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLVA 113
+D+ ++ ILN + A N+ DALK +F P+ VV N+PY IS+PL+
Sbjct: 65 LDKDLIPILNSQFASK---PNFNLHQGDALKFDFNTLGAEPRSLRVVGNLPYNISTPLIF 121
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ R +LQKE R+ A PG ++ RL++ V+ VE + +V F P
Sbjct: 122 HLLQNASLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPP 181
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P +P D R F+++ KTL T K
Sbjct: 182 PKVDSAIVRLVPYETLPHPAKDHRVLERVVREAFNQRRKTLRNTLK 227
>gi|392947700|ref|ZP_10313332.1| Dimethyladenosine transferase [Lactobacillus pentosus KCA1]
gi|392437111|gb|EIW15003.1| Dimethyladenosine transferase [Lactobacillus pentosus KCA1]
Length = 295
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 119/222 (53%), Gaps = 21/222 (9%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS GQ+ LT+Q VL +IV + I +D V+EIGPG G LT L + V A EID+R++
Sbjct: 26 KSLGQNFLTDQNVLHNIVATADIGANDNVIEIGPGIGALTEYLARAAHHVLAFEIDDRLL 85
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDL----------VVANIPYGISSPLVAKL 115
IL+ AD +D + V+++D LK + +VAN+PY I++P++ L
Sbjct: 86 PILDETLAD---YDNVTVVNQDILKADLAAMISEHLDNERPLKLVANLPYYITTPILMNL 142
Query: 116 VYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPK 175
+ G +F + +++QKE A RL A PG + L + V+ E M V + F+P P
Sbjct: 143 LAGDVAFENIVVMMQKEVADRLAAEPGTKAYGALTIAVQYRMAAEMAMVVPRTVFVPAPN 202
Query: 176 VDSSVV---IIRPKAEIPDVNLDEWRAF--TRTCFSKKNKTL 212
VDS++V + P+ +P DE F + F+ + K L
Sbjct: 203 VDSAIVKLTALPPRTHLP---FDEAAFFKVVKAGFAHRRKNL 241
>gi|397779474|ref|YP_006543947.1| dimethyladenosine transferase [Methanoculleus bourgensis MS2]
gi|396937976|emb|CCJ35231.1| dimethyladenosine transferase [Methanoculleus bourgensis MS2]
Length = 266
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 115/214 (53%), Gaps = 4/214 (1%)
Query: 8 KGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEI 67
+ QH L +QR ++ I ++ VLEIGPG G LT LL+ V A+E+D +VE
Sbjct: 5 RDQHFLVDQRAVEKIAGFVDVS-GRRVLEIGPGEGVLTRALLDRGATVVAVEVDPALVEE 63
Query: 68 LNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATL 127
L AD L ++ DA K +FP FD+VVAN+PY SS + +L+ F A L
Sbjct: 64 LEFLFADEIAEGCLQLVPGDATKVDFPPFDIVVANLPYSASSKITFRLL--ESGFEVAVL 121
Query: 128 LLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP-K 186
+ QKEFARR++A PG RL+V V+ A V+ ++++S F P P+V S VV I P +
Sbjct: 122 MYQKEFARRMIARPGKPGVGRLSVMVQTYASVKPLLELSPNSFRPKPQVRSWVVRITPHE 181
Query: 187 AEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKK 220
P + + R FS + KT+ + K
Sbjct: 182 PPYPLADRGVYADVVRVLFSYRRKTVRKALRSGK 215
>gi|420162329|ref|ZP_14669088.1| dimethyladenosine transferase [Weissella koreensis KCTC 3621]
gi|394744362|gb|EJF33316.1| dimethyladenosine transferase [Weissella koreensis KCTC 3621]
Length = 297
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 133/246 (54%), Gaps = 24/246 (9%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS GQ+ LT+ +L +IV ++ DD V+EIGPG G LT +L +K+V A EIDER++
Sbjct: 27 KSLGQNFLTDLNILKNIVLAGNVTKDDNVIEIGPGIGALTEQLARAAKEVVAFEIDERLI 86
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEF----------PQFDL-VVANIPYGISSPLVAK 114
+L + +D + +I++D LK + P L +VAN+PY I++P++ +
Sbjct: 87 SVLGDTLSP---YDNIKIINQDILKVDLMSAVQENFTDPSAPLKIVANLPYYITTPILMQ 143
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
++ + +++QKE A RL A PG E+ L++ V+ V + F+P P
Sbjct: 144 ILESGIEVDAIVVMMQKEVADRLAAEPGTKEYGSLSLTVQYRVQARVAFYVDRTSFIPNP 203
Query: 175 KVDSSVVIIRPKAEIPDVNLDEWRAFT--RTCFSKKNKTL--------GATFKQKKKVIE 224
VDS++V+++P+ + + +E R F + F+ + KTL G + K+++
Sbjct: 204 NVDSAIVVLKPREPLEILPDNEQRLFKLFKIGFAMRRKTLWNNLTTAFGKNGGMQDKLLD 263
Query: 225 LLRLSK 230
L +SK
Sbjct: 264 ALEISK 269
>gi|389680946|ref|ZP_10172292.1| dimethyladenosine transferase [Pseudomonas chlororaphis O6]
gi|388555235|gb|EIM18482.1| dimethyladenosine transferase [Pseudomonas chlororaphis O6]
Length = 272
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 119/226 (52%), Gaps = 14/226 (6%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ H+++ GQ+ L + V+D I+R + D +LEIGPG G LT LL ++ +E
Sbjct: 5 YQHRARKRFGQNFLHDAGVIDRILRSINAKSGDRMLEIGPGQGALTEGLLNSGAQLDVVE 64
Query: 60 IDERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL------VVANIPYGISSPLVA 113
+D+ +V ILN++ A D ++ DALK +F + VV N+PY IS+PL+
Sbjct: 65 LDKDLVPILNQQFAGR---DNFSLHQGDALKFDFNSLNAAPGSLRVVGNLPYNISTPLIF 121
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ R +LQKE RL A PG ++ RL++ V+ VE + +V F P
Sbjct: 122 HLLQNASLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPP 181
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P A +P D R F+++ KTL T K
Sbjct: 182 PKVDSAIVRLVPHAVLPHPAKDHRLLERIVREAFNQRRKTLRNTLK 227
>gi|408373906|ref|ZP_11171598.1| ribosomal RNA adenine dimethylase [Alcanivorax hongdengensis
A-11-3]
gi|407766194|gb|EKF74639.1| ribosomal RNA adenine dimethylase [Alcanivorax hongdengensis
A-11-3]
Length = 270
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 114/215 (53%), Gaps = 12/215 (5%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQH L ++ ++D +VR + P DT++EIGPG G LT LLE +H +E+D ++
Sbjct: 8 KRFGQHFLHDRNLVDRLVRTLGLQPGDTLVEIGPGRGALTYPLLEEMPHLHVVELDRDLI 67
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDL------VVANIPYGISSPLVAKLVYGT 119
+L + + +RL + DAL+ +F VV N+PY IS+PL+ L+ +
Sbjct: 68 ALLRQENSP----ERLTIHESDALRFDFTTLKPADGKLRVVGNLPYNISTPLIFHLLAQS 123
Query: 120 KSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSS 179
+ T +LQKE RL ASPG ++ RL++ V+ +++ V F P PKVDS+
Sbjct: 124 TAISDMTFMLQKEVVDRLTASPGTRDWGRLSIMVQYHCQADYLFFVPPGAFSPPPKVDSA 183
Query: 180 VVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTL 212
VV + P P DE R F+++ K +
Sbjct: 184 VVRLIPHVSPPYPAKDEAHLRRLVTQAFTQRRKAI 218
>gi|347821595|ref|ZP_08875029.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein,
partial [Verminephrobacter aporrectodeae subsp.
tuberculatae At4]
Length = 227
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 121/227 (53%), Gaps = 23/227 (10%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQH LT+Q V+ +IV+ + P +++EIGPG LT L+E ++ IE+D +
Sbjct: 7 KRFGQHFLTDQAVIAAIVQAIAPQPGQSMVEIGPGLAALTQPLVERLGRLSVIELDRDLA 66
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEF--------------PQFDL--VVANIPYGISS 109
+ L R H+RL+VI+ DAL +F PQ L VV N+PY +S+
Sbjct: 67 QRLQR-------HERLDVIAADALTIDFTQLAQTLRTQQADPPQRGLLRVVGNLPYNVST 119
Query: 110 PLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRD 169
P++ L+ ++ +LQKE R+LA P S + RL+V ++ ++ ++ V+ R
Sbjct: 120 PILFHLLAHAQAIEDQHFMLQKEVVERMLAQPATSAYGRLSVMLQWRYAMQHLLSVAPRS 179
Query: 170 FLPCPKVDSSVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATF 216
F P P+V S+V+ +RP A+ ++L R FS++ K L T
Sbjct: 180 FDPPPRVHSAVLRMRPHAQPAPLSLPLLEELVRVAFSQRRKLLRHTL 226
>gi|331006688|ref|ZP_08329965.1| Dimethyladenosine transferase [gamma proteobacterium IMCC1989]
gi|330419496|gb|EGG93885.1| Dimethyladenosine transferase [gamma proteobacterium IMCC1989]
Length = 274
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 122/229 (53%), Gaps = 14/229 (6%)
Query: 1 YIFFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHA 57
Y F HK++ GQ+ LT+Q +++ IV + P D ++EIGPG G +T +L++ ++
Sbjct: 5 YPFAHKARKRFGQNFLTDQNIINRIVTSINAKPSDRLVEIGPGQGAITQQLIQACPQLQV 64
Query: 58 IEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL------VVANIPYGISSPL 111
IE+D ++ IL A + + +DAL+ +F + +V N+PY IS+PL
Sbjct: 65 IELDRDLIPIL---LAQFAKYPEFAIHQQDALRFDFATLMVEKQPLRIVGNLPYNISTPL 121
Query: 112 VAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFL 171
+ L+ + +LQKE RL+A+ G+ + RL++ V+ + E + V F
Sbjct: 122 IFHLLSYQDRIQDMHFMLQKEVVNRLVATAGEKNYGRLSIMVQYYCETEHLFAVPPECFD 181
Query: 172 PCPKVDSSVVIIRPKAEIPDV--NLDEWRAFTRTCFSKKNKTLGATFKQ 218
P PKVDS++V ++P ++P V N+ F ++ KTL T KQ
Sbjct: 182 PQPKVDSAIVRLQPHKKLPYVANNVAHLSHLVNLAFQQRRKTLRNTLKQ 230
>gi|259500886|ref|ZP_05743788.1| dimethyladenosine transferase [Lactobacillus iners DSM 13335]
gi|302190661|ref|ZP_07266915.1| dimethyladenosine transferase [Lactobacillus iners AB-1]
gi|309809117|ref|ZP_07702990.1| dimethyladenosine transferase [Lactobacillus iners SPIN 2503V10-D]
gi|259167580|gb|EEW52075.1| dimethyladenosine transferase [Lactobacillus iners DSM 13335]
gi|308170562|gb|EFO72582.1| dimethyladenosine transferase [Lactobacillus iners SPIN 2503V10-D]
Length = 295
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 128/233 (54%), Gaps = 18/233 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+F K+K GQ+ L + ++ I+ + + V+EIGPG G+LT +LL KV A E
Sbjct: 20 YFMKAKKSLGQNFLVDLPIVKKIIASAGVVEGSQVIEIGPGIGSLTEQLLLAGAKVLAYE 79
Query: 60 IDERMVEIL-NRRAADSG---FHDRLNVISKDALKTEFPQ-----FD-----LVVANIPY 105
+D + +IL N A G +DR +I KD LK +F FD +VVAN+PY
Sbjct: 80 VDPDLPDILYNELPAQIGNYELNDRFRIIMKDILKADFATDIADYFDVNQPIIVVANLPY 139
Query: 106 GISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDV 165
I++P++ KL++ TL++QKE A R+ A+ + L + VK DV+F +V
Sbjct: 140 YITTPIILKLMHSPIKISQLTLMMQKEVAERISAAHKSKAYGPLTIAVKKDMDVDFAFEV 199
Query: 166 SKRDFLPCPKVDSSVVIIRP-KAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
+ F+P PKVDS+VV+++P + ++ + D + + FS++ KTL K
Sbjct: 200 KRTSFMPSPKVDSAVVVLKPLEHKLLIEHEDLFNQIVKLAFSQRRKTLNNNLK 252
>gi|428218642|ref|YP_007103107.1| ribosomal RNA small subunit methyltransferase A [Pseudanabaena sp.
PCC 7367]
gi|427990424|gb|AFY70679.1| Ribosomal RNA small subunit methyltransferase A [Pseudanabaena sp.
PCC 7367]
Length = 278
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 104/186 (55%), Gaps = 8/186 (4%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
QH L + +L IV + ++ DD VLEIGPGTGNLT LL + + A+EID + L
Sbjct: 9 AQHWLNSLDILYKIVAAADLHSDDCVLEIGPGTGNLTEMLLPWVRSLIAVEIDRDLCRQL 68
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQF-DLVVANIPYGISSP----LVAKLVYGTKSFR 123
R+ D +I D L+ P+ + VVANIPY I+SP L+ K+ F
Sbjct: 69 RRKFK---HKDNFELIEADLLQMPLPETPNKVVANIPYNITSPILHRLMGKIAQPVGQFD 125
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
LL+QKE RL A+PG +N L++ + +AD E++ DV + F P PKV S+VV I
Sbjct: 126 RIVLLVQKEIGDRLTANPGTKAYNALSIRTQYLADCEYICDVPPKAFTPPPKVSSAVVSI 185
Query: 184 RPKAEI 189
P++ +
Sbjct: 186 MPRSPL 191
>gi|407707992|ref|YP_006831577.1| yitT family protein [Bacillus thuringiensis MC28]
gi|407385677|gb|AFU16178.1| dimethyladenosine transferase [Bacillus thuringiensis MC28]
Length = 292
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 123/220 (55%), Gaps = 15/220 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + VL+ IV + I + +EIGPG G LT +L + +KKV A EID+R
Sbjct: 21 FKKSLGQNFLIDTNVLNRIVDHAEIGSESGAIEIGPGIGALTEQLAKRAKKVVAFEIDQR 80
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEF-----PQFD-----LVVANIPYGISSPLVA 113
++ IL+ A + + VI+KD LK + QF+ +VVAN+PY I++P++
Sbjct: 81 LLPILDETLAP---YSNVTVINKDVLKADVHEVFSEQFEEGQDVMVVANLPYYITTPILF 137
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
KL+ R +++QKE RL A PG E+ L++ ++ +VE VM V + F+P
Sbjct: 138 KLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVFVPQ 197
Query: 174 PKVDSSVV--IIRPKAEIPDVNLDEWRAFTRTCFSKKNKT 211
P VDS+++ + R K + N + R F+++ KT
Sbjct: 198 PNVDSAIIRLLKRQKPVVEVTNETFFFEVVRASFAQRRKT 237
>gi|312874729|ref|ZP_07734748.1| dimethyladenosine transferase [Lactobacillus iners LEAF 2053A-b]
gi|311089474|gb|EFQ47899.1| dimethyladenosine transferase [Lactobacillus iners LEAF 2053A-b]
Length = 295
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 128/233 (54%), Gaps = 18/233 (7%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+F K+K GQ+ L + ++ I+ + + V+EIGPG G+LT +LL KV A E
Sbjct: 20 YFMKAKKSLGQNFLVDLPIVKKIIASAGVVEGSQVIEIGPGIGSLTEQLLLAGAKVLAYE 79
Query: 60 IDERMVEIL-NRRAADSG---FHDRLNVISKDALKTEFPQ-----FD-----LVVANIPY 105
+D + +IL N A G +DR +I KD LK +F FD +VVAN+PY
Sbjct: 80 VDPDLPDILYNELPAQIGNYELNDRFRIIMKDILKADFATDIADYFDVNRPIIVVANLPY 139
Query: 106 GISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDV 165
I++P++ KL++ TL++QKE A R+ A+ + L + VK DV+F +V
Sbjct: 140 YITTPIILKLMHSPVKISQLTLMMQKEVAERISAAHKSKAYGPLTIAVKKDMDVDFAFEV 199
Query: 166 SKRDFLPCPKVDSSVVIIRP-KAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
+ F+P PKVDS+VV+++P + ++ + D + + FS++ KTL K
Sbjct: 200 KRTSFMPSPKVDSAVVVLKPLEHKLLIEHEDLFNQIVKLAFSQRRKTLNNNLK 252
>gi|399007391|ref|ZP_10709901.1| dimethyladenosine transferase [Pseudomonas sp. GM17]
gi|425901934|ref|ZP_18878525.1| dimethyladenosine transferase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397892756|gb|EJL09233.1| dimethyladenosine transferase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|398120363|gb|EJM10027.1| dimethyladenosine transferase [Pseudomonas sp. GM17]
Length = 272
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 119/226 (52%), Gaps = 14/226 (6%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ H+++ GQ+ L + V+D I+R + D +LEIGPG G LT LL ++ +E
Sbjct: 5 YQHRARKRFGQNFLHDAGVIDRILRSINAKSGDRMLEIGPGQGALTEGLLNSGAQLDVVE 64
Query: 60 IDERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL------VVANIPYGISSPLVA 113
+D+ +V ILN++ A D ++ DALK +F + VV N+PY IS+PL+
Sbjct: 65 LDKDLVPILNQQFAGR---DNFSLHQGDALKFDFNSLNAAPGSLRVVGNLPYNISTPLIF 121
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ R +LQKE RL A PG ++ RL++ V+ VE + +V F P
Sbjct: 122 HLLQNAGLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPP 181
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P A +P D R F+++ KTL T K
Sbjct: 182 PKVDSAIVRLVPHAVLPHPAKDHRLLERIVREAFNQRRKTLRNTLK 227
>gi|419808594|ref|ZP_14333493.1| Dimethyladenosine transferase [Mycoplasma agalactiae 14628]
gi|390605499|gb|EIN14877.1| Dimethyladenosine transferase [Mycoplasma agalactiae 14628]
Length = 262
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 123/216 (56%), Gaps = 8/216 (3%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDD-TVLEIGPGTGNLTLKLLEVSKKVHAIEIDERM 64
K GQ+ L ++ V+ IV INP+ ++EIGPGTG LT L+ K+ A EID M
Sbjct: 12 KKFGQNFLHSESVIQRIV--DIINPEGKQIIEIGPGTGALTKYLVNKCSKLVAFEIDPDM 69
Query: 65 VEILNRRAADSGFHDRLNVISKDALKTEFPQFDL--VVANIPYGISSPLVAKLVYGTKSF 122
++ LN++ + +L + D L Q+ VV NIPY I+S ++ K++ F
Sbjct: 70 IQFLNKQNYFDAENKKL--VHDDFLNANLDQYACFEVVGNIPYYITSEIIFKIIENRFLF 127
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
+ A LL+QKE A R++A+P E+++L++ + VA V+ + VSK +F P PKVDS++V
Sbjct: 128 KRAALLVQKEVADRIVAAPNSYEYSKLSITCQYVAKVKKELFVSKNNFSPVPKVDSAIVT 187
Query: 183 IRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
+ D N D+ + F + CFS + K L + KQ
Sbjct: 188 FDFYQDKND-NYDQLKDFFKLCFSARRKKLIWSLKQ 222
>gi|333909966|ref|YP_004483699.1| ribosomal RNA small subunit methyltransferase A [Methanotorris
igneus Kol 5]
gi|333750555|gb|AEF95634.1| Ribosomal RNA small subunit methyltransferase A [Methanotorris
igneus Kol 5]
Length = 272
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 122/213 (57%), Gaps = 14/213 (6%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERM- 64
K GQ L ++ + V +++ DD VLEIG G G LT +L + +KKV+ IEIDE++
Sbjct: 13 KKLGQCFLIDKNFVKKAVDAANLTKDDVVLEIGLGRGILTEELAKNAKKVYVIEIDEKLR 72
Query: 65 --VEILNRRAADSGFHDRLNVISKDALKTEFPQ--FDLVVANIPYGISSPLVAKLVYGTK 120
E + R +D ++VI DALK F + F+ VVAN+PY ISSP+ KL+
Sbjct: 73 PYAEKITRE------YDNVDVIWGDALKVNFDELGFNKVVANLPYQISSPITFKLL--KT 124
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
F A L+ Q EFA+R++A G ++ RL+V V+ AD+EF+ V F P PKV+S++
Sbjct: 125 DFDVAVLMYQYEFAKRMVAKEGTKDYGRLSVAVQYKADIEFICKVPPSAFSPRPKVNSAI 184
Query: 181 VIIRPKAEIPDVNLDE-WRAFTRTCFSKKNKTL 212
V I + + V +E + R F KNKT+
Sbjct: 185 VKIVKREPLFKVEDEEFFENVLRALFQHKNKTV 217
>gi|339637700|emb|CCC16666.1| ribosomal RNA small subunit methyltransferase A [Lactobacillus
pentosus IG1]
Length = 295
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 119/222 (53%), Gaps = 21/222 (9%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS GQ+ LT+Q VL +IV + I +D V+EIGPG G LT L + V A EID+R++
Sbjct: 26 KSLGQNFLTDQNVLHNIVATADIGVNDNVIEIGPGIGALTEYLARAAHHVLAFEIDDRLL 85
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDL----------VVANIPYGISSPLVAKL 115
IL+ AD +D + V+++D LK + +VAN+PY I++P++ L
Sbjct: 86 PILDETLAD---YDNVTVVNQDILKADLAAMISEHLDNERPLKLVANLPYYITTPILMNL 142
Query: 116 VYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPK 175
+ G +F + +++QKE A RL A PG + L + V+ E M V + F+P P
Sbjct: 143 LAGDVAFENIVVMMQKEVADRLAAEPGTKAYGALTIAVQYRMAAEMAMVVPRTVFVPAPN 202
Query: 176 VDSSVV---IIRPKAEIPDVNLDEWRAF--TRTCFSKKNKTL 212
VDS++V + P+ +P DE F + F+ + K L
Sbjct: 203 VDSAIVKLTALPPRTHVP---FDEAAFFKVVKAGFAHRRKNL 241
>gi|171186169|ref|YP_001795088.1| dimethyladenosine transferase [Pyrobaculum neutrophilum V24Sta]
gi|170935381|gb|ACB40642.1| dimethyladenosine transferase [Pyrobaculum neutrophilum V24Sta]
Length = 227
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 114/203 (56%), Gaps = 11/203 (5%)
Query: 10 QHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILN 69
QH L + I + P VLE+GPG G LT+ L E ++ V+AIE+D R+ E+L
Sbjct: 8 QHFLRDPSAARYIA--ELVPPGLDVLEVGPGRGALTIPLAERARTVYAIEVDRRLAELLR 65
Query: 70 RRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLL 129
+ A + + VI DAL+ E+P+ D V+NIPY I+SPL+ KL + A + +
Sbjct: 66 KTAPPN-----VVVIEGDALEVEWPRADYFVSNIPYSITSPLLMKL---ARHRMPAVVTV 117
Query: 130 QKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAEI 189
Q+E A RL A+PG + RL V V+ +VE + + R F P P+V S+VV + P+
Sbjct: 118 QREVAERLAAAPGGENYGRLTVAVQCHYEVEVLRTLPPRVFQPPPRVYSAVVRLTPRPPC 177
Query: 190 PDVNLDEWRAFTRTCFSKKNKTL 212
+ + D ++ FT FS + KTL
Sbjct: 178 VE-DFDGFQRFTAWLFSARRKTL 199
>gi|150400809|ref|YP_001324575.1| dimethyladenosine transferase [Methanococcus aeolicus Nankai-3]
gi|166221674|sp|A6UTZ1.1|RSMA_META3 RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|150013512|gb|ABR55963.1| dimethyladenosine transferase [Methanococcus aeolicus Nankai-3]
Length = 271
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 120/212 (56%), Gaps = 11/212 (5%)
Query: 5 HKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERM 64
+K GQ L ++ ++ + ++IN +D VLEIG G G LT +L + KKV IE+D+++
Sbjct: 4 NKKLGQCFLKDKNIVKKAINAANINKNDIVLEIGLGKGILTKELAKQCKKVIVIELDKKL 63
Query: 65 VEILNRRAADSGFHDRLNVISKDALKTEFPQ--FDLVVANIPYGISSPLVAKLVYGTKSF 122
EI + + +I DALK + F+ VVAN+PY ISSP+ KL+ F
Sbjct: 64 -EIFWEDIIKE--YPNVEIIWNDALKVNLKELGFNKVVANLPYQISSPITFKLL--DCDF 118
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
A L+ Q EFA+R+ A G E++RL+V+V+ A V++V VS F P PKVDS++V
Sbjct: 119 EVAVLMYQYEFAKRMGAPSGTKEYSRLSVSVQYRAVVDYVCKVSPSAFSPKPKVDSAIVK 178
Query: 183 IRPKAEIPDVNLDEWR---AFTRTCFSKKNKT 211
I K E P N+D W F R F +NK
Sbjct: 179 ITKKNE-PIHNIDNWEFFDGFNRALFQHRNKN 209
>gi|448385115|ref|ZP_21563694.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloterrigena thermotolerans DSM 11522]
gi|445657400|gb|ELZ10228.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloterrigena thermotolerans DSM 11522]
Length = 295
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 115/210 (54%), Gaps = 10/210 (4%)
Query: 8 KGQHILTNQRVLDSI-VRKSSINPDDT-VLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
+ QH L + RVLD + +I+ D + +LEIG GTG LT +LL +V +E D +
Sbjct: 36 RDQHFLVDDRVLDRLPTYLEAIDADTSQLLEIGGGTGALTDRLLAAGDEVTVVERDRDLA 95
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSA 125
E L AD L VI DAL+ + P F V+N+PYG+SS + +L K
Sbjct: 96 EFLREEFADEIAAGELTVIEGDALEVDLPDFTASVSNLPYGVSSEIAFRLFPEKKPL--- 152
Query: 126 TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP 185
L+ Q+EFA R++A PG SE+ RL+V+ + ADVE V + K F P P V S+VV P
Sbjct: 153 VLMFQQEFAERMVAEPGTSEYGRLSVSSQHYADVELVESIPKEAFDPQPAVQSAVVRAVP 212
Query: 186 KAEIPDVNL---DEWRAFTRTCFSKKNKTL 212
+ PD + D + F + F+++ KT+
Sbjct: 213 RE--PDYTVADEDFFLRFVKAVFTQRRKTV 240
>gi|345858285|ref|ZP_08810682.1| dimethyladenosine transferase [Desulfosporosinus sp. OT]
gi|344328601|gb|EGW39982.1| dimethyladenosine transferase [Desulfosporosinus sp. OT]
Length = 280
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 131/235 (55%), Gaps = 17/235 (7%)
Query: 5 HKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERM 64
KS GQ+ L + V++ IV S+++P+ ++EIGPG G LT L +K+ A+E+D
Sbjct: 19 QKSMGQNFLMSDEVINCIVAASTLHPEVPLVEIGPGLGVLTRILATKVQKMWAVELDRHK 78
Query: 65 VEILNRRAADSGFHDRLNVISKDALKTEF-----PQFDLVVANIPYGISSPLVAKLVYGT 119
+ ILN+ G + +I++DALK + Q +V N+PY I+SPL+ + T
Sbjct: 79 IGILNKEL--KGLP--IEIINQDALKLDLNELWGDQMGYLVGNLPYYITSPLIMHFLEQT 134
Query: 120 KSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSS 179
T+++QKE A R+ A PG + L++ V++ A V +MDV F P PKV S+
Sbjct: 135 DRLSGMTIMVQKEVADRIAALPGSKTYGVLSIAVQISAKVTKIMDVLPSSFWPAPKVTSA 194
Query: 180 VVI--IRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK-----QKKKVIELLR 227
V+ +RP + DV+ E+ + FS++ KTLG + +K++VIE L+
Sbjct: 195 VIRLDLRPYSGF-DVDKREFFQVVKAAFSQRRKTLGNSLAGGLGLRKEEVIERLQ 248
>gi|345005063|ref|YP_004807916.1| ribosomal RNA small subunit methyltransferase A [halophilic
archaeon DL31]
gi|344320689|gb|AEN05543.1| Ribosomal RNA small subunit methyltransferase A [halophilic
archaeon DL31]
Length = 289
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 118/210 (56%), Gaps = 15/210 (7%)
Query: 10 QHILTNQRVLDSIVRKSSINPDDT----VLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
QH L + RVLD R + P+ T +LEIG GTG LT +LL V +E D +
Sbjct: 26 QHYLVDDRVLD---RLTGYLPEGTDRSHLLEIGGGTGALTDRLLAAGDHVTVVERDSDLA 82
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSA 125
L + A+ RL+VI DAL + P+F V+N+PYG+SS + +L+ K
Sbjct: 83 AFLRKEFAEDIDAGRLDVIEGDALDVDLPEFTASVSNLPYGVSSEIAFQLLPEKKPL--- 139
Query: 126 TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP 185
L+ QKEFA R++A+PG+ ++ RL+V+ + ADVE V V K F P P V+S+VV P
Sbjct: 140 VLMFQKEFAERMVAAPGEDDYGRLSVSAQHYADVELVEHVPKEAFDPQPSVESAVVRCTP 199
Query: 186 KAEIPDVN-LDE--WRAFTRTCFSKKNKTL 212
+ PD +DE + F + F+++ KT+
Sbjct: 200 RD--PDYEVVDEAFFLRFVKALFTQRRKTM 227
>gi|410453253|ref|ZP_11307211.1| ribosomal RNA small subunit methyltransferase A [Bacillus
bataviensis LMG 21833]
gi|409933376|gb|EKN70304.1| ribosomal RNA small subunit methyltransferase A [Bacillus
bataviensis LMG 21833]
Length = 292
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 126/222 (56%), Gaps = 17/222 (7%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + +L IV ++++ + +EIGPG G LT +L SKKV A EID+R
Sbjct: 22 FKKSLGQNFLIDTNILKKIVSFANLHENSGAIEIGPGIGALTEQLARSSKKVVAFEIDQR 81
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKT--------EFPQFD--LVVANIPYGISSPLVA 113
++ IL + ++ + +I KD L+ EF D +VVAN+PY +++P++
Sbjct: 82 LLPILQDTLSP---YENVEIIHKDVLEADVQTVMEEEFKDIDDIMVVANLPYYVTTPIIM 138
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
KL+ R +LQKE A R+ A PG ++ L++ ++ + E VM V K F+P
Sbjct: 139 KLLEDHLPIRGIVCMLQKEVADRISAKPGTKDYGSLSIAIQYYTEAETVMIVPKTVFVPQ 198
Query: 174 PKVDSSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTL 212
P VDS+V+ + K E P V++ + F TR+ F+++ KTL
Sbjct: 199 PNVDSAVIRLT-KREKPAVSVKDEAFFFQVTRSSFAQRRKTL 239
>gi|417003907|ref|ZP_11942793.1| dimethyladenosine transferase [Anaerococcus prevotii
ACS-065-V-Col13]
gi|325478267|gb|EGC81386.1| dimethyladenosine transferase [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 280
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 128/218 (58%), Gaps = 13/218 (5%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L ++ +D IV + ++ ++ V+EIGPG G +T ++ +V+KKV AIEID+
Sbjct: 21 FSKSLGQNFLVDKNFVDKIVDAADVSGEN-VIEIGPGIGTITYEMAKVAKKVVAIEIDDS 79
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL---------VVANIPYGISSPLVAK 114
++ I+ + D ++I +D LK + + VV+N+PY I++P++ K
Sbjct: 80 LIPIIEENMVE---FDNFDLIHEDILKADLEKIVAEEFAGESFKVVSNLPYYITTPIIEK 136
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
LV + T+++QKE A R+LA+ D E++ L+V VK +D + V +V K F+P P
Sbjct: 137 LVTSNLPCKDMTIMVQKEVADRMLATEKDKEYSSLSVFVKYYSDAKKVTNVPKSVFMPQP 196
Query: 175 KVDSSVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTL 212
K+DS+V+ + + DV+ + + F+K+ KT+
Sbjct: 197 KIDSTVLKLELRKYTDDVDEAKLFSLIHAGFNKRRKTI 234
>gi|207340778|gb|EDZ69021.1| YPL266Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 204
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 85/129 (65%)
Query: 89 LKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNR 148
+KTE P FD+ ++N PY ISSPLV KL+ + R + L+ Q+EFA RLLA PGDS + R
Sbjct: 1 MKTELPYFDICISNTPYQISSPLVFKLINQPRPPRVSILMFQREFALRLLARPGDSLYCR 60
Query: 149 LAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAEIPDVNLDEWRAFTRTCFSKK 208
L+ NV++ A+V +M V K +F P P+V+SSVV + K P V+ +EW R F +K
Sbjct: 61 LSANVQMWANVTHIMKVGKNNFRPPPQVESSVVRLEIKNPRPQVDYNEWDGLLRIVFVRK 120
Query: 209 NKTLGATFK 217
N+T+ A FK
Sbjct: 121 NRTISAGFK 129
>gi|78485998|ref|YP_391923.1| dimethyladenosine transferase [Thiomicrospira crunogena XCL-2]
gi|119365859|sp|Q31F24.1|RSMA_THICR RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|78364284|gb|ABB42249.1| dimethyladenosine transferase [Thiomicrospira crunogena XCL-2]
Length = 266
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 121/227 (53%), Gaps = 19/227 (8%)
Query: 5 HKSK-GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
HK + GQ+ L N R++ IV + PD ++EIGPG LT LL++ KK+ IEID
Sbjct: 6 HKKRFGQNFLNNDRIIQQIVAAIAPKPDQHLVEIGPGEAALTGPLLDIVKKLDIIEIDND 65
Query: 64 MVEILNRR-AADSGFHDRLNVISKDAL----------KTEFPQFDLVVANIPYGISSPLV 112
++ L +R + + FH + DAL +TE P +V N+PY ISSPL+
Sbjct: 66 LIGPLTKRFSHNPAFH----LHHTDALLFDYSQLLEAETETPSLR-IVGNLPYNISSPLL 120
Query: 113 AKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
L+ + + +LQKE R+ A PG + RL+V ++ + E+++ V +F P
Sbjct: 121 FHLLKYARYIQDMHFMLQKEVVERITAQPGVKAYGRLSVMIQYTCETEYLLTVGPENFTP 180
Query: 173 CPKVDSSVVIIRPKAEIPDVNLD--EWRAFTRTCFSKKNKTLGATFK 217
PKVDS++V +RP + P +D ++ + FS+K KTL K
Sbjct: 181 PPKVDSAIVRLRPFEKRPFQAIDDKDFAKLVKQAFSQKRKTLRNNLK 227
>gi|218249123|ref|YP_002374494.1| dimethyladenosine transferase [Cyanothece sp. PCC 8801]
gi|226729777|sp|B7JWJ7.1|RSMA_CYAP8 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|218169601|gb|ACK68338.1| dimethyladenosine transferase [Cyanothece sp. PCC 8801]
Length = 272
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 122/225 (54%), Gaps = 19/225 (8%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
QH L ++ LD I+ + +N D VLEIGPGTG LT +LL + + + A+E+D ++
Sbjct: 9 AQHWLRSETALDQIIEAAQLNMSDLVLEIGPGTGILTRRLLPLVQSIVAVELDR---DLC 65
Query: 69 NRRAADSGFHDRLNVISKDALK-------TEFPQF---DLVVANIPYGISSPLVAKLVYG 118
R A G + ++ D L +FPQF + VVANIPY I+SP++ KL+
Sbjct: 66 YRLAKSFGNFNHFLLLEGDILSLDLTTQLEQFPQFQPINKVVANIPYNITSPILEKLLGS 125
Query: 119 TK-----SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
S+ LL+QKE A+R++ASP + L+V + +A +++ +V + F P
Sbjct: 126 IAHPQHPSYELIVLLMQKEVAQRIVASPQSKAYGALSVRTQYLAQCDYICEVPSKAFDPP 185
Query: 174 PKVDSSVVIIRPKA-EIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
PKVDS+V+ + P++ E P +N + + F+ + K L K
Sbjct: 186 PKVDSAVIRLTPRSLETPAINPQKLDQLVKLGFANRRKMLHNNLK 230
>gi|15669218|ref|NP_248023.1| dimethyladenosine transferase [Methanocaldococcus jannaschii DSM
2661]
gi|27151565|sp|Q58435.1|RSMA_METJA RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|1591684|gb|AAB99033.1| dimethyladenosine transferase (ksgA) [Methanocaldococcus jannaschii
DSM 2661]
Length = 275
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 120/210 (57%), Gaps = 8/210 (3%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQ L ++ ++ V +++ DD VLEIG G G LT +L + +KKV+ IEID+ +
Sbjct: 6 KKLGQCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLE 65
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDL--VVANIPYGISSPLVAKLVYGTKSFR 123
N+ ++ + +I DALK + + D VVAN+PY ISSP+ KL+ + F
Sbjct: 66 PYANKLKE---LYNNIEIIWGDALKVDLNKLDFNKVVANLPYQISSPITFKLI--KRGFD 120
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A L+ Q EFA+R++A G ++ RL+V V+ ADVE V V F P PKV S++V I
Sbjct: 121 LAVLMYQYEFAKRMVAKEGTKDYGRLSVAVQSRADVEIVAKVPPSAFYPKPKVYSAIVKI 180
Query: 184 RP-KAEIPDVNLDEWRAFTRTCFSKKNKTL 212
+P K + N + + F R F +NK++
Sbjct: 181 KPNKGKYHIENENFFDDFLRAIFQHRNKSV 210
>gi|257062209|ref|YP_003140097.1| dimethyladenosine transferase [Cyanothece sp. PCC 8802]
gi|256592375|gb|ACV03262.1| dimethyladenosine transferase [Cyanothece sp. PCC 8802]
Length = 272
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 122/225 (54%), Gaps = 19/225 (8%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
QH L ++ LD I+ + +N D VLEIGPGTG LT +LL + + + A+E+D ++
Sbjct: 9 AQHWLRSETALDQIIEAAQLNMSDLVLEIGPGTGILTRRLLPLVQSIVAVELDR---DLC 65
Query: 69 NRRAADSGFHDRLNVISKDALK-------TEFPQF---DLVVANIPYGISSPLVAKLVYG 118
R A G + ++ D L +FPQF + VVANIPY I+SP++ KL+
Sbjct: 66 YRLAKSFGNFNHFLLLEGDILSLDLTTQLEQFPQFQPINKVVANIPYNITSPILEKLLGS 125
Query: 119 TK-----SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
S+ LL+QKE A+R++ASP + L+V + +A +++ +V + F P
Sbjct: 126 IAHPQHPSYELIVLLMQKEVAQRIVASPQSKAYGALSVRTQYLAQCDYICEVPSKAFDPP 185
Query: 174 PKVDSSVVIIRPKA-EIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
PKVDS+V+ + P++ E P +N + + F+ + K L K
Sbjct: 186 PKVDSAVIRLTPRSLETPAINPQKLDQLVKLGFANRRKMLHNNLK 230
>gi|397662274|ref|YP_006502974.1| ribosomal RNA small subunit methyltransferase A (dimethyladenosine
transferase) [Taylorella equigenitalis ATCC 35865]
gi|394350453|gb|AFN36367.1| ribosomal RNA small subunit methyltransferase A (dimethyladenosine
transferase) [Taylorella equigenitalis ATCC 35865]
gi|399114876|emb|CCG17672.1| ribosomal RNA small subunit methyltransferase A (dimethyladenosine
transferase) [Taylorella equigenitalis 14/56]
Length = 259
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 119/231 (51%), Gaps = 17/231 (7%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQH LT+Q V D IVRK S+N D V+EIGPG LT LL ++ IEID + L
Sbjct: 10 GQHFLTDQSVPDEIVRKLSLNASDCVVEIGPGLSALTNVLLSKLNHLYVIEIDRDLAAKL 69
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDL---VVANIPYGISSPLVAKLVYGTKSFRSA 125
+ +S +L VI D L +F F +V N+PY ISSP++ L+ S
Sbjct: 70 RKTHDES----KLTVIESDVLDVDFSIFPTPLRIVGNLPYNISSPILFHLLKYADSVVDQ 125
Query: 126 TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII-- 183
+LQKE R++A PG SE+ RL+V ++ + ++DV F P PKVDS+VV +
Sbjct: 126 HFMLQKEVVDRMVAKPGSSEYGRLSVMLQERYKMHSILDVPPEAFTPPPKVDSAVVKMLP 185
Query: 184 ----RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLSK 230
RPK + DV + + FS++ K L K E L +++
Sbjct: 186 LASDRPKPKSYDV----FSKVVQQAFSQRRKMLRGVLKSYDIDWEFLNINE 232
>gi|254555556|ref|YP_003061973.1| dimethyladenosine transferase [Lactobacillus plantarum JDM1]
gi|300767100|ref|ZP_07077013.1| dimethyladenosine transferase [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|254044483|gb|ACT61276.1| dimethyladenosine transferase [Lactobacillus plantarum JDM1]
gi|300495638|gb|EFK30793.1| dimethyladenosine transferase [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
Length = 296
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 119/222 (53%), Gaps = 21/222 (9%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS GQ+ LT+Q VL +IV + I +D V+EIGPG G LT L + V A EID+R++
Sbjct: 27 KSLGQNFLTDQNVLHNIVATADIGTNDNVIEIGPGIGALTEYLARAAHHVLAFEIDDRLL 86
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDL----------VVANIPYGISSPLVAKL 115
IL+ AD +D + V+++D LK + +VAN+PY I++P++ +
Sbjct: 87 PILDETLAD---YDNVTVVNQDILKADLAAMISEHLDNERPLKLVANLPYYITTPILMNI 143
Query: 116 VYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPK 175
+ G +F + +++QKE A RL A PG + L + V+ E M V + F+P P
Sbjct: 144 LAGDVAFENIVVMMQKEVADRLAAEPGTKAYGALTIAVQYRMAAEMAMVVPRTVFVPSPN 203
Query: 176 VDSSVV---IIRPKAEIPDVNLDEWRAF--TRTCFSKKNKTL 212
VDS++V + P+ +P DE F + F+ + K L
Sbjct: 204 VDSAIVKLTALPPRTHVP---FDEAAFFKVVKAGFAHRRKNL 242
>gi|358068305|ref|ZP_09154772.1| dimethyladenosine transferase [Johnsonella ignava ATCC 51276]
gi|356693564|gb|EHI55238.1| dimethyladenosine transferase [Johnsonella ignava ATCC 51276]
Length = 303
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 124/219 (56%), Gaps = 13/219 (5%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
K GQ+ L + +LD IV + I DDTVLEIGPG G+LT +L +KKV AIEID+
Sbjct: 21 LSKKYGQNFLIDSNILDMIVAAADIKEDDTVLEIGPGLGSLTQRLASKAKKVVAIEIDKL 80
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQF---------DLVVANIPYGISSPLVAK 114
++ ILN ++ ++ + V+++D LKT+ + VVAN+PY I++P+V K
Sbjct: 81 LIPILNETLSE---YNNIVVLNEDILKTDIGEIIDKYAEAGSIKVVANLPYYITTPIVMK 137
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
L+ G S T+++QKE A R+ A G ++ L++ V V V +S F+P P
Sbjct: 138 LLEGHYPVESITVMVQKEVAERMQAVAGSKDYGALSIAVAYYCAVYMVGVISPNCFIPKP 197
Query: 175 KVDSSVV-IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTL 212
KV+S+V+ ++ + + V+ R F+++ KTL
Sbjct: 198 KVESAVIKLVLGEKCLKAVDEKMLFKIIRASFNQRRKTL 236
>gi|296109078|ref|YP_003616027.1| dimethyladenosine transferase [methanocaldococcus infernus ME]
gi|295433892|gb|ADG13063.1| dimethyladenosine transferase [Methanocaldococcus infernus ME]
Length = 269
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 117/211 (55%), Gaps = 7/211 (3%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
+ KS GQH L ++ + + +++ DD VLEIG G G LT +L + +KKV+ IEID+
Sbjct: 4 YKKSLGQHFLVDKNFVYKAIEGANLKEDDKVLEIGLGKGILTEELCKRAKKVYVIEIDKN 63
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL--VVANIPYGISSPLVAKLVYGTKS 121
+ N + LN+I DALK + D VVAN+PY ISSP+ KL+ +
Sbjct: 64 LESFANSLINK---YKNLNIIWDDALKVNLKEIDYNKVVANLPYQISSPITFKLL--DRG 118
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
F + L+ Q EFA+R++A G ++ RL+V+++ A+ E + V F P PKV S++V
Sbjct: 119 FDLSVLMYQLEFAKRMIAKEGTKDYGRLSVSLQAQANAEILCKVPPSAFYPRPKVWSALV 178
Query: 182 IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTL 212
I P + +N + + R F +NK L
Sbjct: 179 KIEPHNKYKILNKEFFNNLVRGAFQHRNKFL 209
>gi|308179573|ref|YP_003923701.1| dimethyladenosine transferase [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|308045064|gb|ADN97607.1| dimethyladenosine transferase [Lactobacillus plantarum subsp.
plantarum ST-III]
Length = 296
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 119/222 (53%), Gaps = 21/222 (9%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS GQ+ LT+Q VL +IV + I +D V+EIGPG G LT L + V A EID+R++
Sbjct: 27 KSLGQNFLTDQNVLHNIVATADIGTNDNVIEIGPGIGALTEYLARAAHHVLAFEIDDRLL 86
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDL----------VVANIPYGISSPLVAKL 115
IL+ AD +D + V+++D LK + +VAN+PY I++P++ +
Sbjct: 87 PILDETLAD---YDNVTVVNQDILKADLAAMISEHLDNERPLKLVANLPYYITTPILMNI 143
Query: 116 VYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPK 175
+ G +F + +++QKE A RL A PG + L + V+ E M V + F+P P
Sbjct: 144 LAGDVAFENIVVMMQKEVADRLAAEPGTKAYGALTIAVQYRMAAEMAMVVPRTVFVPSPN 203
Query: 176 VDSSVV---IIRPKAEIPDVNLDEWRAF--TRTCFSKKNKTL 212
VDS++V + P+ +P DE F + F+ + K L
Sbjct: 204 VDSAIVKLTALPPRTHVP---FDEAAFFKVVKAGFAHRRKNL 242
>gi|448820147|ref|YP_007413309.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
plantarum ZJ316]
gi|448273644|gb|AGE38163.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
plantarum ZJ316]
Length = 296
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 119/222 (53%), Gaps = 21/222 (9%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS GQ+ LT+Q VL +IV + I +D V+EIGPG G LT L + V A EID+R++
Sbjct: 27 KSLGQNFLTDQNVLHNIVATADIGTNDNVIEIGPGIGALTEYLARAAHHVLAFEIDDRLL 86
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDL----------VVANIPYGISSPLVAKL 115
IL+ AD +D + V+++D LK + +VAN+PY I++P++ +
Sbjct: 87 PILDETLAD---YDNVTVVNQDILKADLAAMISEHLDNERPLKLVANLPYYITTPILMNI 143
Query: 116 VYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPK 175
+ G +F + +++QKE A RL A PG + L + V+ E M V + F+P P
Sbjct: 144 LAGDVAFENIVVMMQKEVADRLAAEPGTKAYGALTIAVQYRVAAEMAMVVPRTVFVPSPN 203
Query: 176 VDSSVV---IIRPKAEIPDVNLDEWRAF--TRTCFSKKNKTL 212
VDS++V + P+ +P DE F + F+ + K L
Sbjct: 204 VDSAIVKLTALPPRTHVP---FDEAAFFKVVKAGFAHRRKNL 242
>gi|388454984|ref|ZP_10137279.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Fluoribacter dumoffii Tex-KL]
Length = 256
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 117/216 (54%), Gaps = 12/216 (5%)
Query: 9 GQHILTNQRVLDSIVRKSSINP--DDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVE 66
GQ+ L N+ ++D IVR +INP +D +LEIGPG G LT LL K+ A+EID + +
Sbjct: 10 GQNFLQNRHIIDDIVR--AINPQAEDNMLEIGPGLGALTEPLLRRLNKLTAVEIDWDLQK 67
Query: 67 ILNRRAADSGFHDRLNVISKDALKTEFPQFDL---VVANIPYGISSPLVAKLVYGTKSFR 123
L +A S ++L++I+ DAL ++ QF VV N+PY IS+PL+ L+
Sbjct: 68 HL---SAMSVAQNKLHLIAADALTLDYSQFGTHLRVVGNLPYNISTPLLIHLLNYASHIE 124
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
+LQKE R+ A PG + RL V ++ VE++ DV F P PKVDS+VV +
Sbjct: 125 DMHFMLQKEVVERMAAQPGSKAYGRLTVMLQYHCVVEYLFDVPPEAFDPQPKVDSAVVRL 184
Query: 184 RPKAEIP--DVNLDEWRAFTRTCFSKKNKTLGATFK 217
P P V+ + + F+ + KTL K
Sbjct: 185 TPHRISPFEKVSAGQLERLVASAFAMRRKTLNNNLK 220
>gi|339634696|ref|YP_004726337.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Weissella koreensis KACC 15510]
gi|338854492|gb|AEJ23658.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Weissella koreensis KACC 15510]
Length = 297
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 132/246 (53%), Gaps = 24/246 (9%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS GQ+ LT+ +L +IV ++ DD V+EIGPG G LT +L +K+V A EIDER++
Sbjct: 27 KSLGQNFLTDLNILKNIVLAGNVTKDDNVIEIGPGIGALTEQLARAAKEVVAFEIDERLI 86
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEF----------PQFDL-VVANIPYGISSPLVAK 114
+L + +D + +I++D LK + P L +VAN+PY I++P++ +
Sbjct: 87 SVLGDTLSP---YDNIKIINQDILKVDLMSAVQENFTDPSAPLKIVANLPYYITTPILMQ 143
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
++ + +++QKE A RL A PG E+ L++ V+ V + F+P P
Sbjct: 144 ILESGIEVDAIVVMMQKEVADRLAAEPGTKEYGSLSLTVQYRVQARVAFYVDRTSFIPNP 203
Query: 175 KVDSSVVIIRPKAEIPDVNLDEWRAFT--RTCFSKKNKTL--------GATFKQKKKVIE 224
VDS++V++ P+ + + +E R F + F+ + KTL G + K+++
Sbjct: 204 NVDSAIVVLEPREPLEILPDNEQRLFKLFKIGFAMRRKTLWNNLTTAFGKNGGMQDKLLD 263
Query: 225 LLRLSK 230
L +SK
Sbjct: 264 ALEISK 269
>gi|187927497|ref|YP_001897984.1| dimethyladenosine transferase [Ralstonia pickettii 12J]
gi|309779801|ref|ZP_07674556.1| dimethyladenosine transferase [Ralstonia sp. 5_7_47FAA]
gi|404385049|ref|ZP_10985438.1| ribosomal RNA small subunit methyltransferase A [Ralstonia sp.
5_2_56FAA]
gi|187724387|gb|ACD25552.1| dimethyladenosine transferase [Ralstonia pickettii 12J]
gi|308921378|gb|EFP67020.1| dimethyladenosine transferase [Ralstonia sp. 5_7_47FAA]
gi|348616473|gb|EGY65973.1| ribosomal RNA small subunit methyltransferase A [Ralstonia sp.
5_2_56FAA]
Length = 281
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 119/230 (51%), Gaps = 15/230 (6%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQ+ L + V+ +IV PDD ++EIGPG G LT+ L+E + + +E+D +V
Sbjct: 16 KRFGQNFLVDDGVIHAIVAAIDPKPDDVLVEIGPGLGALTVPLMERVRTLQVVELDRDLV 75
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFD------LVVANIPYGISSPLVAKLVYGT 119
L +R F DRL V + DAL +F +V N+PY ISSPL+ L
Sbjct: 76 ARLQQR-----FGDRLIVHAGDALAFDFGSLQEAGRPLRIVGNLPYNISSPLLFHLATFA 130
Query: 120 KSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSS 179
R +LQKE R++A+PG F+RL+V +++ +E V+DV F P PKVDS+
Sbjct: 131 DRVRDQHFMLQKEVVDRMVAAPGSKAFSRLSVMLQVRYYMELVLDVPPGSFNPPPKVDSA 190
Query: 180 VVIIRP----KAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIEL 225
VV + P K+ V+L FS++ K L T + VI+
Sbjct: 191 VVRMIPWPADKSPYAPVDLRALGTVVTMAFSQRRKVLRNTLGALRDVIDF 240
>gi|440680353|ref|YP_007155148.1| dimethyladenosine transferase [Anabaena cylindrica PCC 7122]
gi|428677472|gb|AFZ56238.1| dimethyladenosine transferase [Anabaena cylindrica PCC 7122]
Length = 271
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/222 (36%), Positives = 120/222 (54%), Gaps = 15/222 (6%)
Query: 5 HKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERM 64
K QH L +++ LD+IV+ + D +LEIGPGTG LT +LL ++K + A+EID +
Sbjct: 5 RKQFAQHWLKSEKALDAIVKAAQCREGDRILEIGPGTGILTRRLLPLAKSLVAVEIDRDL 64
Query: 65 VEILNRRAAD-------SGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVY 117
++L ++ G L+V S+ F + + VVANIPY I+ P++ KL+
Sbjct: 65 CKLLVKQLGQKENFLLLQGDFLTLDVPSQLLAFNNFQKQNKVVANIPYNITGPIIEKLL- 123
Query: 118 GT------KSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFL 171
GT + + S LL+QKE A RL A PG F L+V V+ +AD E + V F
Sbjct: 124 GTITQPNPEPYDSIVLLVQKEVAERLYAKPGSRTFGALSVRVQYLADCELICTVPASAFH 183
Query: 172 PCPKVDSSVVIIRPKA-EIPDVNLDEWRAFTRTCFSKKNKTL 212
P PKVDS+VV + P+ EIP + + + F K K L
Sbjct: 184 PPPKVDSAVVRLLPRQIEIPANSPKKLENLVKLGFGAKRKML 225
>gi|319778500|ref|YP_004129413.1| dimethyladenosine transferase [Taylorella equigenitalis MCE9]
gi|317108524|gb|ADU91270.1| Dimethyladenosine transferase [Taylorella equigenitalis MCE9]
Length = 259
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 119/231 (51%), Gaps = 17/231 (7%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQH LT+Q V D IVRK S+N D V+EIGPG LT LL ++ IEID + L
Sbjct: 10 GQHFLTDQSVPDEIVRKLSLNASDCVVEIGPGLSALTNVLLSKLNHLYVIEIDRDLAAKL 69
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDL---VVANIPYGISSPLVAKLVYGTKSFRSA 125
+ +S +L VI D L +F F +V N+PY ISSP++ L+ S
Sbjct: 70 RKTHDES----KLTVIESDVLDVDFSIFPTPLRIVGNLPYNISSPILFHLLKYADSVVDQ 125
Query: 126 TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII-- 183
+LQKE R++A PG SE+ RL+V ++ + ++DV F P PKVDS+VV +
Sbjct: 126 HFMLQKEVVDRMVAKPGSSEYGRLSVMLQERYKMHSILDVPPEAFTPPPKVDSAVVKMLP 185
Query: 184 ----RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLSK 230
RPK + DV + + FS++ K L K E L +++
Sbjct: 186 LASDRPKPKSYDV----FSKVVQQAFSQRRKMLRGVLKSYDIDWEFLNINE 232
>gi|347751682|ref|YP_004859247.1| ribosomal RNA small subunit methyltransferase A [Bacillus coagulans
36D1]
gi|347584200|gb|AEP00467.1| Ribosomal RNA small subunit methyltransferase A [Bacillus coagulans
36D1]
Length = 295
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 119/223 (53%), Gaps = 19/223 (8%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + +L +I + + + V+EIGPG G LT L SKKV A EID+R
Sbjct: 22 FKKSLGQNFLIDPNILRNITDTADLTEESGVVEIGPGIGALTEHLARRSKKVVAFEIDKR 81
Query: 64 MVEILNRRAADSGFHDRLNVISKDALK--------TEFPQFD--LVVANIPYGISSPLVA 113
+ IL A + +NVI +D LK TEF + +VVAN+PY +++P++
Sbjct: 82 LAPILKDTLAP---YPNVNVIYEDVLKADVGKVLETEFAGINDIMVVANLPYYVTTPIIL 138
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
K V G R ++LQKE A R+ A PG + L++ ++ E M V K F+P
Sbjct: 139 KFVTGLYPIRGMVVMLQKEVADRISAVPGTKNYGTLSIAIQYYMTAEVAMIVPKTVFMPQ 198
Query: 174 PKVDSSVVII----RPKAEIPDVNLDEWRAFTRTCFSKKNKTL 212
P VDS+VV + +PK E+ D + + F+++ KTL
Sbjct: 199 PNVDSAVVKLVKRDKPKVEVKDEAF--FFQVAKASFAQRRKTL 239
>gi|22298201|ref|NP_681448.1| dimethyladenosine transferase [Thermosynechococcus elongatus BP-1]
gi|27151563|sp|P59157.1|RSMA_THEEB RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|22294380|dbj|BAC08210.1| dimethyladenosine transferase [Thermosynechococcus elongatus BP-1]
Length = 265
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 115/224 (51%), Gaps = 12/224 (5%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I K GQH L ++ +L I+ + ++P D VLEIGPG G LT LL +V A+E+D
Sbjct: 2 IRARKRFGQHWLRSEAILAQIIAAAELHPGDRVLEIGPGRGALTRPLLVSGAEVVAVELD 61
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL--VVANIPYGISSPLVAKLVYGT 119
+ L RR DS +R +I D L+ + VVANIPY I+ PL+ L+
Sbjct: 62 RDLCGQL-RRQFDS---ERFQLIEGDILRLDLAPLGCNKVVANIPYNITGPLLGHLLGSI 117
Query: 120 K-----SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
+F LL+QKE RL+ASPG + L+V V+ +A E V V R F P P
Sbjct: 118 ARPRRPAFERLILLVQKEIGDRLMASPGSKAYGALSVRVQFLATCEKVCAVPPRAFQPPP 177
Query: 175 KVDSSVVIIRPKAEIPDVNLDEW-RAFTRTCFSKKNKTLGATFK 217
KVDS VV +RP +P V +W + F+ + K L K
Sbjct: 178 KVDSVVVCLRPHRTLPRVGSPQWLETLLKQGFATRRKMLANALK 221
>gi|167760646|ref|ZP_02432773.1| hypothetical protein CLOSCI_03028 [Clostridium scindens ATCC 35704]
gi|336422399|ref|ZP_08602547.1| ribosomal RNA small subunit methyltransferase A [Lachnospiraceae
bacterium 5_1_57FAA]
gi|167661771|gb|EDS05901.1| dimethyladenosine transferase [Clostridium scindens ATCC 35704]
gi|336008778|gb|EGN38786.1| ribosomal RNA small subunit methyltransferase A [Lachnospiraceae
bacterium 5_1_57FAA]
Length = 291
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 123/222 (55%), Gaps = 16/222 (7%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K GQ+ L + VLD I+R + I DD VLEIGPG G +T L E + KV A+EID+
Sbjct: 23 FQKKFGQNFLIDTHVLDKIIRAADIGKDDMVLEIGPGIGTMTQYLAEAAGKVIAVEIDKN 82
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQF---------DLVVANIPYGISSPLVAK 114
++ IL SG+ + + +I++D LK + + VVAN+PY I++P++
Sbjct: 83 LIPILTDTL--SGYEN-VQIINEDVLKLDIQRLVEEENAGRPIKVVANLPYYITTPIIMG 139
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
L S T+++QKE A R+ PG+ ++ L++ V+ A+ V +V F+P P
Sbjct: 140 LFESHVPLYSVTVMVQKEVADRMQTGPGNKDYGALSLAVQYYAEPYIVANVPPNCFMPRP 199
Query: 175 KVDSSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTLG 213
KV S+V+ + + E P V +++ R R F+++ KTL
Sbjct: 200 KVGSAVIRLT-RYEKPPVEVEDERLLFDIIRASFNQRRKTLA 240
>gi|333396677|ref|ZP_08478492.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Lactobacillus coryniformis subsp. coryniformis KCTC
3167]
Length = 296
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 122/221 (55%), Gaps = 15/221 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ LT +L I + + D VLEIGPG G+LT +L + + +V A+EID+R
Sbjct: 25 FKKSLGQNFLTEPTILRQIASAAELTTADDVLEIGPGIGSLTEQLAQNAHQVLALEIDQR 84
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFP-----QFD-----LVVANIPYGISSPLVA 113
++ IL A +D + V+++D LK++ FD VVAN+PY I++P++
Sbjct: 85 LLPILADTLAP---YDNVTVLNQDVLKSDLATLIREHFDGQHKVKVVANLPYYITTPILL 141
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
+L+ +F +++QKE A RL A+PG + L+V V+ V+ V K F+P
Sbjct: 142 RLLESGVAFDQIVVMMQKEVAERLAAAPGSKAYGSLSVAVQYQMTVKLAFIVPKTVFVPQ 201
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTL 212
P VDS++V + P V DE + R F+++ K+L
Sbjct: 202 PNVDSAIVSLTRHVTPPAVATDEKVFARLVRGSFAQRRKSL 242
>gi|358449944|ref|ZP_09160418.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Marinobacter manganoxydans MnI7-9]
gi|385333019|ref|YP_005886970.1| dimethyladenosine transferase [Marinobacter adhaerens HP15]
gi|311696169|gb|ADP99042.1| dimethyladenosine transferase [Marinobacter adhaerens HP15]
gi|357225787|gb|EHJ04278.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Marinobacter manganoxydans MnI7-9]
Length = 276
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 117/214 (54%), Gaps = 10/214 (4%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQ+ L + V++ I+R + PDD ++EIGPG G LT ++L V+ K+ +E+D ++
Sbjct: 11 KRFGQNFLHDPGVIEQIIRAINPKPDDAIVEIGPGLGALTEEILAVNPKLQVVELDRDLI 70
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDL-----VVANIPYGISSPLVAKLVYGTK 120
+L + + + + DALK +F Q + ++ N+PY IS+PL+ L+
Sbjct: 71 PVLRTKFFN---YPEFRIHEADALKFDFSQLMVDRPLRIIGNLPYNISTPLIFHLLSQAG 127
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
+ +LQKE +R+ A PGD+ + RL + + V+ + +V F P PKVDS++
Sbjct: 128 VVQDMHFMLQKEVVQRMAAVPGDNNYGRLGIMTQYFCRVQPLFEVGPGAFRPAPKVDSAI 187
Query: 181 VIIRPKAEIPDV--NLDEWRAFTRTCFSKKNKTL 212
V + P +P +L +A RT F+ + KTL
Sbjct: 188 VRLVPHKTLPHPAKDLTTLQAVVRTAFNARRKTL 221
>gi|365926609|ref|ZP_09449372.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Lactobacillus mali KCTC 3596 = DSM 20444]
gi|420264877|ref|ZP_14767477.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Lactobacillus mali KCTC 3596 = DSM 20444]
gi|394429630|gb|EJF02054.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Lactobacillus mali KCTC 3596 = DSM 20444]
Length = 298
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 126/221 (57%), Gaps = 15/221 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ LT+ +L IV ++ +D V+E+GPG G LT ++ + + +V A+EIDE+
Sbjct: 25 FKKSLGQNFLTDINILHKIVAAGDVSENDDVIEVGPGIGALTEQIAKAAHQVLALEIDEQ 84
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQ-----FD-----LVVANIPYGISSPLVA 113
++ +L A G +D + V+ +D LK + + FD VVAN+PY I+SP++
Sbjct: 85 LIPVL---AETLGQYDNVTVVLQDILKADLKELIRNNFDGKHPIKVVANLPYYITSPIIM 141
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ +F + +++QKE A RL A PG ++ L V+ + + V + F+P
Sbjct: 142 HLLDTKIAFSAIVVMMQKEVANRLSAQPGTKDYGALTTRVQYQMECKTAFIVPRTVFIPQ 201
Query: 174 PKVDSSVVIIRPKAE--IPDVNLDEWRAFTRTCFSKKNKTL 212
P VDS++V++ P E + + +++ + + CF+ + K+L
Sbjct: 202 PNVDSAIVVLTPLQEKHLEPYSEEQFFSLVKGCFAHRRKSL 242
>gi|170077519|ref|YP_001734157.1| S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase
[Synechococcus sp. PCC 7002]
gi|226732632|sp|B1XIV9.1|RSMA_SYNP2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|169885188|gb|ACA98901.1| S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase
[Synechococcus sp. PCC 7002]
Length = 273
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 122/232 (52%), Gaps = 25/232 (10%)
Query: 5 HKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERM 64
K GQH LT+Q++LD IV +++ P D VLEIGPG G LT +LL + + ++EID +
Sbjct: 4 RKRFGQHWLTDQQILDEIVAAANLQPTDRVLEIGPGKGALTSRLLPQVEALLSVEIDRDL 63
Query: 65 VEILNRRAADSGFHDRLN--VISKDALKT-------EFPQFD---LVVANIPYGISSPLV 112
+ + + + DR N ++ D L+T +FPQF VVANIPY I+ P++
Sbjct: 64 CKYMVK-----NYGDRPNFLLLEADYLQTDINEFLGDFPQFQNPRKVVANIPYNITGPIL 118
Query: 113 AKLVYGT------KSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVS 166
KL+ GT F S LL+QKE RL+A P F L + V+ +AD E V V
Sbjct: 119 EKLL-GTIDRPNSNPFESIVLLIQKEVGDRLVAHPCTKAFGALTLRVQYLADCETVCVVP 177
Query: 167 KRDFLPCPKVDSSVVIIRPKA-EIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
+ F P PKV+S VV +RP+ P N + F+ K K L K
Sbjct: 178 PKAFYPKPKVESVVVRLRPRPLAQPAQNPKLLATLIKVGFASKRKMLRNNLK 229
>gi|116624617|ref|YP_826773.1| dimethyladenosine transferase [Candidatus Solibacter usitatus
Ellin6076]
gi|116227779|gb|ABJ86488.1| dimethyladenosine transferase [Candidatus Solibacter usitatus
Ellin6076]
Length = 247
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/207 (37%), Positives = 111/207 (53%), Gaps = 8/207 (3%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQH L+N VLD I ++ V+EIGPG G LT KLL+ S +V AIE+D +VE L
Sbjct: 6 GQHFLSNGSVLDRIALAVCPEGEELVIEIGPGKGALTEKLLQRSGRVIAIELDPVLVEYL 65
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLV--VANIPYGISSPLVAKLVYGTKSFRSAT 126
++ RL VI D L T+ Q+ V N+PY I+SP++ + V
Sbjct: 66 RQKFEGE---SRLQVIHADVLHTDLAQWGPVPIAGNLPYYITSPILERSVRAGAP--RTV 120
Query: 127 LLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPK 186
L+QKE A RL+A PG ++ L + L AD + + +V F P PKVDS+VV++ P
Sbjct: 121 FLIQKEVAHRLVAHPGQRDYGYLTLQTALFADTKLLFEVKPGAFKPPPKVDSAVVLLTPH 180
Query: 187 AEIPDV-NLDEWRAFTRTCFSKKNKTL 212
+ + D++ F F +K KTL
Sbjct: 181 GRDYGITDRDKFLKFLSHSFRQKRKTL 207
>gi|448323600|ref|ZP_21513058.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natronococcus amylolyticus DSM 10524]
gi|445599496|gb|ELY53529.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natronococcus amylolyticus DSM 10524]
Length = 279
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 120/224 (53%), Gaps = 12/224 (5%)
Query: 8 KGQHILTNQRVLD---SIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERM 64
+ QH L + RVLD + + + +N +LEIG GTG LT +LL V+ V +E D +
Sbjct: 19 RDQHFLVDDRVLDRLPTYLTEIDVN-TSHLLEIGGGTGALTDRLLAVADAVTVVERDREL 77
Query: 65 VEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRS 124
L AD RL V+ DAL+ + P F V+N+PYG+SS + +L+ R
Sbjct: 78 AAFLREEFADEIDDGRLTVLEGDALEVDLPDFSASVSNLPYGVSSEITFRLL---PEKRP 134
Query: 125 ATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIR 184
L+ Q+EFA R++A PG SE+ RL+V+ + A+ E V + K F P P V S+VV +
Sbjct: 135 LVLMFQQEFAERMVADPGTSEYGRLSVSTQHYAEPELVESIPKEAFSPPPAVRSAVVRLE 194
Query: 185 PKAEIPDVNLDE---WRAFTRTCFSKKNKTLGATFKQKKKVIEL 225
P+ PD +D+ + F + F+++ KT+ + + L
Sbjct: 195 PRE--PDYAVDDEAFFLRFVKAMFTQRRKTIRNAIRNTAHITNL 236
>gi|310825990|ref|YP_003958347.1| hypothetical protein [Eubacterium limosum KIST612]
gi|308737724|gb|ADO35384.1| hypothetical protein ELI_0367 [Eubacterium limosum KIST612]
Length = 285
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 121/223 (54%), Gaps = 16/223 (7%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ F+K GQ+ L ++ ++ IV +++ +DTVLEIGPG G +T L E + KV+++EID
Sbjct: 19 LHFNKRYGQNFLIDENIVRKIVEAGNVHKNDTVLEIGPGIGTMTQVLAEAAGKVYSVEID 78
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQF---DL------VVANIPYGISSPLV 112
++++ +L + D + + +I D LKT+ P +L +VAN+PY +++P++
Sbjct: 79 KKLIPVLAKTLEDC---NNVEIIQGDILKTDIPGLLRTNLQKNPLKIVANLPYYVTTPII 135
Query: 113 AKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
+ T ++QKE RL A PG + L + + A+ E V F+P
Sbjct: 136 MGFLESELPIEQMTFMIQKEVGERLCAEPGTKAYGSLTIAAQFYAETEISFYVPAAVFMP 195
Query: 173 CPKVDSSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTL 212
PKVDS VV ++ +AE P + + + + F + F + KTL
Sbjct: 196 RPKVDSIVVTLKKRAE-PAIRVSDKKLFFQIVKASFLNRRKTL 237
>gi|325912354|ref|ZP_08174750.1| dimethyladenosine transferase [Lactobacillus iners UPII 143-D]
gi|325475825|gb|EGC78995.1| dimethyladenosine transferase [Lactobacillus iners UPII 143-D]
Length = 295
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 125/227 (55%), Gaps = 15/227 (6%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS GQ+ L + ++ I+ + + V+EIGPG G+LT +LL KV A E+D +
Sbjct: 26 KSLGQNFLVDLPIVKKIIASAGVVECSQVIEIGPGIGSLTEQLLLAGAKVLAYEVDPDLP 85
Query: 66 EIL-NRRAADSG---FHDRLNVISKDALKTEFPQ-----FD-----LVVANIPYGISSPL 111
+IL N A G +DR +I KD LK +F FD +VVAN+PY I++P+
Sbjct: 86 DILYNELPAQIGNYELNDRFRIIMKDILKADFATDIADYFDVNQPIIVVANLPYYITTPI 145
Query: 112 VAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFL 171
+ KL++ TL++QKE A R+ A+ + L + VK DV+F +V + F+
Sbjct: 146 ILKLMHSPIKISQLTLMMQKEVAERISAAHKSKAYGPLTIAVKKDMDVDFAFEVKRTSFM 205
Query: 172 PCPKVDSSVVIIRP-KAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
P PKVDS+VV+++P + ++ + D + + FS++ KTL K
Sbjct: 206 PSPKVDSAVVVLKPLEHKLLIEHEDLFNQIVKLAFSQRRKTLNNNLK 252
>gi|421889320|ref|ZP_16320362.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Ralstonia solanacearum K60-1]
gi|378965325|emb|CCF97110.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Ralstonia solanacearum K60-1]
Length = 281
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 120/230 (52%), Gaps = 15/230 (6%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQ+ L ++ V+ +IV PDD ++EIGPG G LT+ L+E + +E+D +V
Sbjct: 16 KRFGQNFLVDEGVIHAIVAAIDPQPDDVLVEIGPGLGALTVPLMERVPTLQVVELDRDLV 75
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDL------VVANIPYGISSPLVAKLVYGT 119
L RR F D+L V + DAL +F + +V N+PY ISSPL+ L
Sbjct: 76 ARLQRR-----FGDKLVVHAGDALAFDFGALHVPGRPLRIVGNLPYNISSPLLFHLSAFA 130
Query: 120 KSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSS 179
R +LQKE R++A+PG F+RL+V +++ +E V+DV F P PKVDS+
Sbjct: 131 DRVRDQHFMLQKEVVERMVAAPGSKAFSRLSVMLQVRYYMELVLDVPPGSFNPPPKVDSA 190
Query: 180 VVIIRP----KAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIEL 225
VV + P K+ V++ FS++ K L T ++ I+
Sbjct: 191 VVRMIPWPADKSPYAPVDMRALGTVVTLAFSQRRKVLRNTLGSLREAIDF 240
>gi|336255447|ref|YP_004598554.1| ribosomal RNA small subunit methyltransferase A [Halopiger
xanaduensis SH-6]
gi|335339436|gb|AEH38675.1| Ribosomal RNA small subunit methyltransferase A [Halopiger
xanaduensis SH-6]
Length = 279
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 122/226 (53%), Gaps = 16/226 (7%)
Query: 8 KGQHILTNQRVLDSI-VRKSSINPDDT-VLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
+ QH L + RVLD + I+ D + +LEIG GTG LT +LL V+ +V +E D ++
Sbjct: 19 RDQHFLVDDRVLDRLPTYLEEIDADASHLLEIGGGTGALTDRLLAVADEVTVVERDRKLA 78
Query: 66 EILN---RRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSF 122
L R A D+G L VI DAL+ + P F V+N+PYG+SS + +L+
Sbjct: 79 AFLREEFREAIDAG---DLTVIEDDALEVDLPDFTASVSNLPYGVSSEIAFRLL---PEG 132
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
R L+ Q+EFA R++A P SE+ RL+V+ + ADVE V + K F P P V S+V+
Sbjct: 133 RPLVLMFQQEFAERMVAEPDTSEYGRLSVSTQHYADVEIVESIPKEAFSPPPAVQSAVIR 192
Query: 183 IRPKAEIPDVNLDEWRAFTR---TCFSKKNKTLGATFKQKKKVIEL 225
P+ PD +D+ F R F+++ KT+ + + L
Sbjct: 193 AVPRD--PDYEVDDEEFFLRFVKALFTQRRKTIRNAIRNTAHITNL 236
>gi|443322232|ref|ZP_21051259.1| dimethyladenosine transferase [Gloeocapsa sp. PCC 73106]
gi|442788022|gb|ELR97728.1| dimethyladenosine transferase [Gloeocapsa sp. PCC 73106]
Length = 265
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 111/187 (59%), Gaps = 13/187 (6%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQH L ++ +L+ I+ + + DD VLEIGPGTG LT +L+E + A+EID + L
Sbjct: 10 GQHWLKSEAILNQIIAAARLCQDDAVLEIGPGTGILTRRLVESVSSLVAVEIDRDLCIKL 69
Query: 69 NRRAADSGFHDRLNVISKDALKTE---FPQFDLVVANIPYGISSPLVAKLVYGT------ 119
+ D + ++I D L+ + +P + VVANIPY I+ P++ KL+ GT
Sbjct: 70 RKLLGD---RENFSLIEADILQLDLNNYPHLNKVVANIPYNITGPILEKLL-GTITNPTG 125
Query: 120 KSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSS 179
++++ LL+QKE A RL+A PG F L+V ++ +AD + V V + F P PKVDS+
Sbjct: 126 QNYQLIVLLIQKEVADRLVAQPGSKTFGALSVRIQYLADCQLVCRVPAKAFQPPPKVDSA 185
Query: 180 VVIIRPK 186
VV + P+
Sbjct: 186 VVSLSPR 192
>gi|386334529|ref|YP_006030700.1| s-adenosylmethionine-6-n',n'-adenosyl (rRNA) dimethyltransferase
[Ralstonia solanacearum Po82]
gi|334196979|gb|AEG70164.1| s-adenosylmethionine-6-n',n'-adenosyl (rRNA) dimethyltransferase
[Ralstonia solanacearum Po82]
Length = 281
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 121/230 (52%), Gaps = 15/230 (6%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQ+ L ++ V+ +IV PDD ++EIGPG G LT+ L+E + +E+D +V
Sbjct: 16 KRFGQNFLVDEGVIHAIVAAIDPQPDDVLVEIGPGLGALTVPLMERVPSLQVVELDRDLV 75
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDL------VVANIPYGISSPLVAKLVYGT 119
L RR F D+L V + DAL +F + +V N+PY ISSPL+ L
Sbjct: 76 ARLQRR-----FGDKLVVHAGDALAFDFGALHVPGRSLRIVGNLPYNISSPLLFHLSAFA 130
Query: 120 KSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSS 179
R +LQKE R++A+PG F+RL+V +++ +E V+DV F P PKVDS+
Sbjct: 131 DRVRDQHFMLQKEVVERMVAAPGSKAFSRLSVMLQVRYYMELVLDVPPGSFNPPPKVDSA 190
Query: 180 VV--IIRPKAEIP--DVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIEL 225
VV I P ++P V++ FS++ K L T ++ I+
Sbjct: 191 VVRMIPWPADKLPYAPVDMRALGTVVTLAFSQRRKVLRNTLGSLREAIDF 240
>gi|268318145|ref|YP_003291864.1| dimethyladenosine transferase [Rhodothermus marinus DSM 4252]
gi|262335679|gb|ACY49476.1| dimethyladenosine transferase [Rhodothermus marinus DSM 4252]
Length = 266
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 118/220 (53%), Gaps = 13/220 (5%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQH L + + IV P+D V+EIGPGTG LT LLE + AIEID R V
Sbjct: 9 KRLGQHFLVDPNIARKIVAALQAAPEDPVVEIGPGTGALTGLLLERYPHLTAIEIDPRAV 68
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFD-------LVVANIPYGISSPLVAKLVYG 118
L R + L+V +D LK + + VV N+PY I+SP++ L+
Sbjct: 69 AELKARWPE------LDVRQEDVLKVNWAELAEEKGGRLHVVGNLPYYITSPILFALLDA 122
Query: 119 TKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDS 178
++ A L++Q+E A RL+A PG + L+V +L A + VS+ F P P+V+S
Sbjct: 123 REALAEAVLMMQREVAERLVAPPGSKTYGILSVAAQLWATPALLFPVSRHVFRPKPRVES 182
Query: 179 SVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
+VV + + +PDV+ + R RT F+++ KTL + ++
Sbjct: 183 AVVRLTFERPLPDVDPELLRQVIRTAFNQRRKTLRNSLRR 222
>gi|121534378|ref|ZP_01666202.1| dimethyladenosine transferase [Thermosinus carboxydivorans Nor1]
gi|121307148|gb|EAX48066.1| dimethyladenosine transferase [Thermosinus carboxydivorans Nor1]
Length = 283
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 126/225 (56%), Gaps = 14/225 (6%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I K GQ+ L +++V+D IV +++ P + VLEIGPG G LT L E V A+E+D
Sbjct: 21 IQMSKKLGQNFLVDEQVVDGIVAAAAVKPGEAVLEIGPGIGTLTQGLAEAGANVTAVELD 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFP------QFDLVVANIPYGISSPLVAKL 115
+++++L + A +D + +I D L+ + +F V+AN+PY I++P++ +L
Sbjct: 81 RQLLDVLAKTLAG---YDNVRIIHGDILRIDISREIRAEKFK-VIANLPYYITTPIIMRL 136
Query: 116 VYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPK 175
+ ++QKE A R++A+PG ++ L+V V+ E + V + F+P P
Sbjct: 137 LEERLPVELMVTMVQKEVAERMVAAPGSKDYGALSVAVQFYTQPEIMFVVPPQAFIPAPA 196
Query: 176 VDSSVVIIRPKAEIPDVNLDEWRAFTR---TCFSKKNKTLGATFK 217
V+S+V+ R ++ P V++ + +AF R F+++ KTL K
Sbjct: 197 VESAVIRCRVRSA-PPVSVTDEKAFFRVVKAAFAQRRKTLANALK 240
>gi|421746753|ref|ZP_16184525.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Cupriavidus necator HPC(L)]
gi|409774681|gb|EKN56267.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Cupriavidus necator HPC(L)]
Length = 266
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 116/225 (51%), Gaps = 15/225 (6%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQ+ L + ++ IV + D ++EIGPG G LT LLE +H +E+D +V
Sbjct: 9 KRFGQNFLVDDSIIHGIVNAIDPHAGDLIVEIGPGLGALTEPLLERLDHLHVVELDRDLV 68
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDL------VVANIPYGISSPLVAKLVYGT 119
E L RR + DR+ + + DAL +F Q +V N+PY ISSPL+ L+
Sbjct: 69 ERLRRR-----YGDRMTIHAGDALAFDFDQLKQPGRPLRIVGNLPYNISSPLLFHLMEFA 123
Query: 120 KSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSS 179
R +LQKE R++A PG F RL++ +++ +E+V+DV F P PKVDS+
Sbjct: 124 DHVRDQHFMLQKEVVERMVAEPGSKAFGRLSIMLQVRYHMEYVLDVPPESFNPPPKVDSA 183
Query: 180 VVIIRPKAEIPDVNLDEWRAFTRTC-FSKKNKTLGATFKQKKKVI 223
VV + P D L R+ C + A F Q++KV+
Sbjct: 184 VVRMIPWPRHEDGRL---RSPYAACDMMVLGDLVTAAFSQRRKVL 225
>gi|117925614|ref|YP_866231.1| dimethyladenosine transferase [Magnetococcus marinus MC-1]
gi|171460784|sp|A0LA32.1|RSMA_MAGSM RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|117609370|gb|ABK44825.1| dimethyladenosine transferase [Magnetococcus marinus MC-1]
Length = 279
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 116/219 (52%), Gaps = 14/219 (6%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQ+ L + V IV + I D VLEIGPG G+LT+ LL+ + V A+E D +++ +L
Sbjct: 23 GQNFLVDPSVAPRIVALAGIKAGDRVLEIGPGVGSLTIPLLQKAGAVTAVEKDRKLLPLL 82
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDL-------VVANIPYGISSPLVAKLVYGTKS 121
AA G L ++ +DAL ++ + AN+PY IS+PL+ L+ +
Sbjct: 83 RVEAAGVG---ALTLVEEDALLVDYTALAQQLGGPLKLAANLPYNISTPLMVHLLDHHAA 139
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
F L+ QKE A+RL A PG + L V L A++ DV FLP PKV S+VV
Sbjct: 140 FECMALMFQKEVAQRLAAEPGSKAYGALTVQCALWAEIRHGFDVPPAAFLPAPKVTSAVV 199
Query: 182 IIRPKAEIPDVNLDEWRAFTR---TCFSKKNKTLGATFK 217
++ + P V +++ R F R F+++ KTL T K
Sbjct: 200 HVQMMRQ-PRVAVEDERHFVRVVKAAFAQRRKTLRNTLK 237
>gi|78187147|ref|YP_375190.1| dimethyladenosine transferase [Chlorobium luteolum DSM 273]
gi|119365044|sp|Q3B3D4.1|RSMA_PELLD RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|78167049|gb|ABB24147.1| dimethyladenosine transferase [Chlorobium luteolum DSM 273]
Length = 273
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 114/216 (52%), Gaps = 11/216 (5%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I K GQ+ LT++ + IV S D +LEIGPG G LT ++LEV +E D
Sbjct: 11 IAVKKKLGQNFLTDRNITRKIVAASGAGSQDRILEIGPGFGALTREILEVCPAFTVVEKD 70
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL-----VVANIPYGISSPLVAKLV 116
+ + + + +L +I D L + + V+ NIPY I++P++ KL+
Sbjct: 71 RALAAFIRQE------YPQLQLIEADFLDIDLERLAAGGPLRVLGNIPYSITTPILFKLL 124
Query: 117 YGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKV 176
+S SATL++Q E A RL+A+P E+ LAV ++ DV ++ V ++ F P P V
Sbjct: 125 ENRRSITSATLMMQHEVAARLVATPSTKEYGILAVQLQTFCDVRYLFKVGRKVFRPQPNV 184
Query: 177 DSSVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTL 212
DS+V+ + PK + + + F RT F ++ KTL
Sbjct: 185 DSAVISMVPKKNVAVEDAQAFSRFVRTAFHQRRKTL 220
>gi|295108631|emb|CBL22584.1| dimethyladenosine transferase [Ruminococcus obeum A2-162]
Length = 290
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 121/230 (52%), Gaps = 14/230 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K GQ+ L + VLD I++ S I DD VLEIGPG G +T L + +++V A+EID+
Sbjct: 23 FQKRFGQNFLIDTHVLDRIIQASEITKDDFVLEIGPGIGTMTQYLADSAREVTAVEIDDA 82
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFD---------LVVANIPYGISSPLVAK 114
++ IL + D +NVI D LKT+ + VVAN+PY I++P++
Sbjct: 83 LIPILKDTLKE---WDNVNVIHGDILKTDIRKIADEKNQGRPIKVVANLPYYITTPIIMG 139
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
L S T+++QKE A R+ PG ++ L++ V+ A E V +V F+P P
Sbjct: 140 LFESHVPVDSITVMVQKEVADRMQTGPGSKDYGALSLAVQYYAKPEIVANVPPNCFMPRP 199
Query: 175 KVDSSVVIIRPKAEIPDVNLDEWRAF--TRTCFSKKNKTLGATFKQKKKV 222
KV S+V+ + P DE F R F+++ KTL K +++
Sbjct: 200 KVGSAVIRLTRHQNPPVTAKDEKLMFRIIRASFNQRRKTLANGLKNSQEL 249
>gi|343520930|ref|ZP_08757898.1| dimethyladenosine transferase [Parvimonas sp. oral taxon 393 str.
F0440]
gi|343396136|gb|EGV08673.1| dimethyladenosine transferase [Parvimonas sp. oral taxon 393 str.
F0440]
Length = 280
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 136/237 (57%), Gaps = 17/237 (7%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K+ GQ+ LT++ +L+ IV S+++ + V+EIGPG G LT LLE + KV +IEID R
Sbjct: 20 FSKNFGQNFLTDRNILEKIVEVSAVDKEYGVIEIGPGFGVLTKFLLEKAGKVVSIEIDTR 79
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFD---------LVVANIPYGISSPLVAK 114
+ E+L+ ++ +D + DALK + + +VVAN+PY +++P++ K
Sbjct: 80 LKEVLDYTLSE---YDNFEFVQSDALKIDLKKLIEEKFIQKKIVVVANLPYYVTTPIITK 136
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
L+ S T+++QKE A+RL+A + + +++ VK AD +VS+ F+P P
Sbjct: 137 LLESDLDLESITIMVQKEVAQRLVADENSKDNSSISMFVKYYADANIAFNVSRNVFVPAP 196
Query: 175 KVDSSVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK----QKKKVIELLR 227
VDS+VV ++ K E + ++ + F + KT+ +F +K+K+I++L
Sbjct: 197 NVDSAVVNMKLKKERFEYEKTMFK-LIKNGFENRRKTILNSFCKSGIEKEKIIKVLE 252
>gi|422642714|ref|ZP_16706130.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae Cit 7]
gi|330955094|gb|EGH55354.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae Cit 7]
Length = 268
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 119/226 (52%), Gaps = 14/226 (6%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ H+++ GQ+ L + V+D I+R P+D +LEIGPG G LT LL+ ++ +E
Sbjct: 5 YQHRARKRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTEGLLDSGAQLDVVE 64
Query: 60 IDERMVEILNRRAADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLVA 113
+D+ ++ ILN + A+ N+ DALK +F P+ V N+PY IS+PL+
Sbjct: 65 LDKDLIPILNGQFANK---PNFNLHQGDALKFDFNTLGAEPRSLRVGGNLPYNISTPLIF 121
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ R +LQKE R+ A PG ++ RL++ V+ VE + +V F P
Sbjct: 122 HLLQNASLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPP 181
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P +P D R F+++ KTL T K
Sbjct: 182 PKVDSAIVRLVPYETLPHPAKDHHVLERIVREAFNQRRKTLRNTLK 227
>gi|335420853|ref|ZP_08551888.1| dimethyladenosine transferase [Salinisphaera shabanensis E1L3A]
gi|334894155|gb|EGM32362.1| dimethyladenosine transferase [Salinisphaera shabanensis E1L3A]
Length = 263
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 115/214 (53%), Gaps = 16/214 (7%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQH L + V+D IV + DD ++EIGPG G LT LLE ++ IEID ++ L
Sbjct: 7 GQHFLHERGVIDRIVSMLAPAADDALVEIGPGQGALTEPLLERVDRLSVIEIDRDLIAEL 66
Query: 69 NRRAA-DSGFHDRLNVISKDALKTEFPQFD------LVVANIPYGISSPLVAKLVYGTKS 121
RAA DS RL VI+ DAL+ ++ +V N+PY ISSPL+ L+
Sbjct: 67 ESRAARDS----RLEVIAGDALRIDYAALAERRGPLRLVGNLPYNISSPLLFALLGSAAP 122
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
+LQKE R+ A PG ++ RL V+V A + + DV+ F P PKV SSVV
Sbjct: 123 IIDMHFMLQKEVVDRMTAEPGSRDYGRLTVSVAARAHAQALFDVAPGAFNPPPKVMSSVV 182
Query: 182 IIRPKAEIPDVNLDEWRAFTR---TCFSKKNKTL 212
+ P+A PD + + + F + FS++ KTL
Sbjct: 183 RVTPRA--PDFEIHDGQLFDQLVTAAFSQRRKTL 214
>gi|171694431|ref|XP_001912140.1| hypothetical protein [Podospora anserina S mat+]
gi|170947164|emb|CAP73969.1| unnamed protein product [Podospora anserina S mat+]
Length = 386
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 102/167 (61%), Gaps = 3/167 (1%)
Query: 57 AIEIDERMVEILNRRAADSGFHDRLNVISKDALK-TEFPQFDLVVANIPYGISSPLVAKL 115
+++ID RM + +R + +L VI D +K E P D +++N PY ISSPL+ K+
Sbjct: 77 SVDIDPRMGAEVTKRVQGTPLAKKLEVILGDVIKMPEMPPCDALISNTPYQISSPLIFKM 136
Query: 116 VYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPK 175
+ R A L+ Q+EFA+RL+A PGD+ ++RL+VNV A + +M V K++F P PK
Sbjct: 137 LAMPNPPRVAVLMFQREFAKRLVAKPGDALYSRLSVNVNFWATCKHIMKVGKQNFKPPPK 196
Query: 176 VDSSVVIIRP--KAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKK 220
V+S VV I P + P++ DE+ R F++KNKTL A+F K+
Sbjct: 197 VESDVVRIEPLIGSARPNIAFDEFDGLLRIAFNRKNKTLNASFAIKE 243
>gi|325264298|ref|ZP_08131029.1| dimethyladenosine transferase [Clostridium sp. D5]
gi|324030369|gb|EGB91653.1| dimethyladenosine transferase [Clostridium sp. D5]
Length = 303
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 121/226 (53%), Gaps = 16/226 (7%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K GQ+ L + VLD I+R + I+ DD VLEIGPG G +T L + KV A+EID
Sbjct: 32 FQKKFGQNFLIDTHVLDKIIRSAEISRDDMVLEIGPGIGTMTQYLACAAGKVIAVEIDRA 91
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL---------VVANIPYGISSPLVAK 114
++ IL GF D + V+++D LK + + VVAN+PY I++P++
Sbjct: 92 LIPILEDTL--DGF-DNVTVLNEDILKVDIAELAERENGGRPIKVVANLPYYITTPIIMG 148
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
L +S T+++QKE A R+ PG ++ L++ V+ A V +V F+P P
Sbjct: 149 LFEKHVPVKSITVMVQKEVAERMQVGPGTKDYGALSLAVQYYAKPYIVANVPPNCFMPRP 208
Query: 175 KVDSSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTLGATFK 217
KV S+V+ + + E P V +D+ R R F+++ KTL K
Sbjct: 209 KVGSAVICLE-RYEKPPVQVDDERLMFRIIRASFNQRRKTLANGMK 253
>gi|427728682|ref|YP_007074919.1| dimethyladenosine transferase [Nostoc sp. PCC 7524]
gi|427364601|gb|AFY47322.1| dimethyladenosine transferase [Nostoc sp. PCC 7524]
Length = 274
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 121/221 (54%), Gaps = 21/221 (9%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
QH L +++ LD+IV+ + + +D +LEIGPGTG LT +LL + + + A+EID + E+L
Sbjct: 9 AQHWLKSEKALDAIVKAAECSTNDRILEIGPGTGILTRRLLPLVQSLLAVEIDRDLCELL 68
Query: 69 NRRAADSGFHDRLNVISKDALKTE-------FPQF---DLVVANIPYGISSPLVAKLVYG 118
A G + ++ D L + FP+F + VVANIPY I+ P++ KL+ G
Sbjct: 69 ---AKQLGKKENFLLLQGDFLTLDLDTNLVAFPKFQQPNKVVANIPYNITGPIIEKLL-G 124
Query: 119 T------KSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
T + F S LL+QKE A RL A G F L+V V+ +A+ E + V F P
Sbjct: 125 TITNPNPQPFDSIVLLIQKEVAERLYAKAGSKTFGALSVRVQYLAECELICHVPAGAFYP 184
Query: 173 CPKVDSSVVIIRPKA-EIPDVNLDEWRAFTRTCFSKKNKTL 212
PKVDS+VV +RP+ P + + F++K K L
Sbjct: 185 PPKVDSAVVRLRPRQIATPANDPKRLETLVKLGFAEKRKML 225
>gi|256810093|ref|YP_003127462.1| dimethyladenosine transferase [Methanocaldococcus fervens AG86]
gi|256793293|gb|ACV23962.1| dimethyladenosine transferase [Methanocaldococcus fervens AG86]
Length = 268
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 118/207 (57%), Gaps = 8/207 (3%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQ L ++ ++ V +++ DD VLEIG G G LT +L + +KKV+ IEID+ +
Sbjct: 9 GQCFLIDKNFVNKAVEAANLTKDDVVLEIGLGKGILTEELAKNAKKVYIIEIDKNLEPYA 68
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDL--VVANIPYGISSPLVAKLVYGTKSFRSAT 126
NR ++ + +I DA+K + D VVAN+PY ISSP+ KL+ K F A
Sbjct: 69 NRLKEK---YNNIEIIWGDAVKVDLSNLDFNKVVANLPYQISSPITFKLL--KKGFDLAV 123
Query: 127 LLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP- 185
L+ Q EFA+R++A G ++ RL+V V+ ADVE + V F P PKV S++V I+P
Sbjct: 124 LMYQYEFAKRMVAKEGTKDYGRLSVAVQSRADVEIIAKVPPNAFSPKPKVFSAIVKIKPN 183
Query: 186 KAEIPDVNLDEWRAFTRTCFSKKNKTL 212
K + N D + F R F +NK++
Sbjct: 184 KNKYHIENEDFFDNFLRAIFQHRNKSV 210
>gi|254787084|ref|YP_003074513.1| dimethyladenosine transferaseS-adenosylmethionine-6-N',N'-adenosyl
dimethyltransferase [Teredinibacter turnerae T7901]
gi|237686969|gb|ACR14233.1| dimethyladenosine transferaseS-adenosylmethionine-6-N',N'-adenosyl
dimethyltransferase [Teredinibacter turnerae T7901]
Length = 267
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 120/225 (53%), Gaps = 16/225 (7%)
Query: 5 HKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
H++K GQ+ L +Q V+++IVR D ++EIGPG G +T LLE + IE+D
Sbjct: 9 HQAKKRFGQNFLQDQGVINAIVRAVHPQEGDNLVEIGPGQGAITGLLLEHCPNLQVIELD 68
Query: 62 ERMVE-ILNRRAADSGFHDRLNVISKDALKTEFPQFDLV------VANIPYGISSPLVAK 114
+ ++ +L + A GF + DAL +F V V N+PY IS+PL+
Sbjct: 69 KDLIPGLLAQFAKFRGF----KIHQTDALNFDFSSLSSVEHPLRIVGNLPYNISTPLIFH 124
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
L+ + R +LQKE RL ASPG+ + RL++ + VE + +V F+P P
Sbjct: 125 LLSFREQVRDMHFMLQKEVVERLAASPGEKNYGRLSIMAQYFCQVENLFEVPPECFIPAP 184
Query: 175 KVDSSVVIIRPKAEIP--DVNLDEWRAFTRTCFSKKNKTLGATFK 217
KVDS++V + P E+P N+ + +T F+++ KTL + K
Sbjct: 185 KVDSAIVRLVPHKELPVKAHNMARFETLVKTAFAQRRKTLRNSLK 229
>gi|126657589|ref|ZP_01728744.1| dimethyladenosine transferase [Cyanothece sp. CCY0110]
gi|126621045|gb|EAZ91759.1| dimethyladenosine transferase [Cyanothece sp. CCY0110]
Length = 270
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 123/220 (55%), Gaps = 19/220 (8%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
QH L ++ L+ I++ +++ D +LEIGPGTG LT +LL + + + A+E+D + + L
Sbjct: 9 AQHWLRSETALEQIIQAANLKNSDRLLEIGPGTGILTRRLLPLVQSLIAVELDWDLCKKL 68
Query: 69 NRRAADSGFHDRLNVISKDALK-------TEFPQF---DLVVANIPYGISSPLVAKLVYG 118
+ G D ++ D LK +FP+F + VVANIPY I+SP++ KL+
Sbjct: 69 VKSL---GNEDNFLLLQGDILKLDIATEAEQFPKFLPINKVVANIPYNITSPILEKLLGN 125
Query: 119 TKS-----FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
S + LL+QKE A+R++ASPG + L++ ++ +AD ++ DV K+ F P
Sbjct: 126 IASPENPPYDLIVLLIQKEVAQRIVASPGSKNYGALSIKMQYLADCNYICDVPKKSFYPP 185
Query: 174 PKVDSSVVIIRPKAEIPD-VNLDEWRAFTRTCFSKKNKTL 212
PKVDS+V+ RP+ + +N + FS + K L
Sbjct: 186 PKVDSAVITFRPRPLLNSAINPKQLETLINLGFSSRRKML 225
>gi|406668942|ref|ZP_11076233.1| dimethyladenosine transferase [Facklamia ignava CCUG 37419]
gi|405585223|gb|EKB59058.1| dimethyladenosine transferase [Facklamia ignava CCUG 37419]
Length = 292
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 121/219 (55%), Gaps = 15/219 (6%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS GQ+ L + +L +V +++ TV+EIGPG G LT L SK+V+A EID+R +
Sbjct: 27 KSLGQNFLMDTNILRKMVTTAALTDQTTVIEIGPGIGALTEFLALHSKQVYAFEIDQRFI 86
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFD----------LVVANIPYGISSPLVAKL 115
IL +D +D + ++ +D L+ +F + +VVAN+PY I++P++ L
Sbjct: 87 AILEDTLSD---YDNVQIVHRDILEVDFSAAEYQDLRQAEDLVVVANLPYYITTPIIMGL 143
Query: 116 VYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPK 175
+ FR +++QKE A+R++A P ++ L++ ++ + E V + F P P
Sbjct: 144 ITSGLPFRKLVMMMQKEVAQRMIAQPQTKDYGSLSIAIQNTMEAELSFIVPRTVFNPPPN 203
Query: 176 VDSSVVII--RPKAEIPDVNLDEWRAFTRTCFSKKNKTL 212
VDS+V+ + R +P + + F + CF+++ KTL
Sbjct: 204 VDSAVLTLTRRMSPLVPVEDTAAFEQFVQVCFTQRRKTL 242
>gi|254431695|ref|ZP_05045398.1| dimethyladenosine transferase [Cyanobium sp. PCC 7001]
gi|197626148|gb|EDY38707.1| dimethyladenosine transferase [Cyanobium sp. PCC 7001]
Length = 300
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/220 (37%), Positives = 118/220 (53%), Gaps = 15/220 (6%)
Query: 5 HKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV-SKKVHAIEI 60
H+++ GQH LT+ VLD IV +++ P + VLEIGPG G LT +LL + V A+E+
Sbjct: 26 HRARKRFGQHWLTDAAVLDRIVAAAALAPGERVLEIGPGRGALTQRLLASDAAAVAAVEL 85
Query: 61 DERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYG-- 118
D +V L +R G R + DAL P D VVANIPY I+ PL+ +LV
Sbjct: 86 DRDLVAGLQQR---FGRDARFELHQGDALTLALPPADKVVANIPYNITGPLLERLVGRLD 142
Query: 119 ---TKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPK 175
+R LLLQ+E A R+ SPG + ++ L+V ++L+ + V V R F P PK
Sbjct: 143 HPVQPPYRRLVLLLQREVAERIRCSPGSASYSALSVRMQLLGECRSVCAVPPRCFQPPPK 202
Query: 176 VDSSVVIIRPK--AEIPDVNLDE-WRAFTRTCFSKKNKTL 212
V S V++I P A +P+ L R F+ + K L
Sbjct: 203 VQSEVIVIEPHGPARLPEAALARTTEQLLRRSFAARRKML 242
>gi|403382814|ref|ZP_10924871.1| dimethyladenosine transferase [Paenibacillus sp. JC66]
Length = 294
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 136/241 (56%), Gaps = 24/241 (9%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L +Q +L IV +++ D+ VLEIGPG G LT KL + +V A+EID+R
Sbjct: 26 FKKSLGQNFLVDQNILARIVDAANLREDEGVLEIGPGIGALTEKLAREAGRVVAVEIDQR 85
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQ-FDL---------VVANIPYGISSPLVA 113
++ IL + + ++ VI D LK + FD VVAN+PY +++P+V
Sbjct: 86 LLPILRDTLS---VYPKVTVIHGDVLKLSLKEIFDQHFAKDQPVSVVANLPYYVTTPIVM 142
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
KL+ + +++QKE A R+ ASPG E+ L++ V+ + + V ++ F+P
Sbjct: 143 KLLEEKLPLKQIVVMIQKEVAERMTASPGGKEYGSLSIAVQYYCEPSVELIVPRQAFVPQ 202
Query: 174 PKVDSSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKT-----LGATFKQKKKVIEL 225
P VDS+V+ ++ + E P V++D+ F + F ++ KT LG+ F++ ++ EL
Sbjct: 203 PNVDSAVIKLKVR-EKPPVDVDDEAFFFKVVQASFGQRRKTIANNLLGSFFQKGQR--EL 259
Query: 226 L 226
L
Sbjct: 260 L 260
>gi|169830264|ref|YP_001716246.1| dimethyladenosine transferase [Candidatus Desulforudis audaxviator
MP104C]
gi|169637108|gb|ACA58614.1| dimethyladenosine transferase [Candidatus Desulforudis audaxviator
MP104C]
Length = 299
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 114/218 (52%), Gaps = 12/218 (5%)
Query: 5 HKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERM 64
KS GQ+ L VLD I+ + + D+ V+EIGPG G LT +L E +V A+EID R+
Sbjct: 27 RKSLGQNFLVAAGVLDKILEAAEVEKDEVVIEIGPGVGALTRRLAEKGARVAAVEIDGRL 86
Query: 65 VEILNRRAADSGFHDRLNVISKDALKTEFPQFDL--------VVANIPYGISSPLVAKLV 116
+ +L D G DR+ +I+ DALK ++ VVAN+PY I+SP VA +
Sbjct: 87 IPLLKEVLGDLG--DRVRLINADALKVDYGALLAEMGAGSFKVVANLPYYITSPFVAGFL 144
Query: 117 YGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKV 176
F L++QKE A R+ A+ G + L+V V + + V VS+ F P P V
Sbjct: 145 EAGYRFERMVLMVQKEVADRMTAANGTESYGALSVLVAYHTEADVVWRVSRHCFYPPPAV 204
Query: 177 DSSVVII--RPKAEIPDVNLDEWRAFTRTCFSKKNKTL 212
DS+VV + RP + + + + R F ++ K L
Sbjct: 205 DSAVVRLMRRPAPAVTVLQPELFFRIVRASFGRRRKML 242
>gi|399078286|ref|ZP_10752822.1| dimethyladenosine transferase [Caulobacter sp. AP07]
gi|398033861|gb|EJL27146.1| dimethyladenosine transferase [Caulobacter sp. AP07]
Length = 273
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 114/226 (50%), Gaps = 16/226 (7%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ +KS GQH L + + I R + + DTV+E+GPG G LT LLE +V A+E+D
Sbjct: 18 LLANKSFGQHFLLDLNITRKIARLAGVGEGDTVIEVGPGPGGLTRALLETGARVVAVEMD 77
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL----VVANIPYGISSPLVAKLVY 117
R + +L A + RL ++ DALK + +V+N+PY + +PL+ +
Sbjct: 78 RRFLPLLEDLAVAA--DGRLTIVQGDALKVDMAAIAGGPAHMVSNLPYNVGTPLLINWLT 135
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
G S TL+ QKE A R+ A D + RLAV + V + VMD+ R F P PKV
Sbjct: 136 GPFRPLSMTLMFQKEVADRIAADVDDDAYGRLAVVSQTVCSAKVVMDLPARAFTPPPKVA 195
Query: 178 SSVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVI 223
S+VV + P PD + + K A F Q++K++
Sbjct: 196 SAVVRLVPLEPAPD----------KAMVAALEKVTAAAFGQRRKML 231
>gi|284165664|ref|YP_003403943.1| dimethyladenosine transferase [Haloterrigena turkmenica DSM 5511]
gi|284015319|gb|ADB61270.1| dimethyladenosine transferase [Haloterrigena turkmenica DSM 5511]
Length = 284
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 117/210 (55%), Gaps = 8/210 (3%)
Query: 8 KGQHILTNQRVLDSI-VRKSSINPD-DTVLEIGPGTGNLTLKLLEVSK--KVHAIEIDER 63
+ QH L + RVLD + I+ D D VLEIG GTG LT +LL + KV +E D
Sbjct: 19 RDQHFLVDDRVLDRLPTYLQEIDADTDHVLEIGGGTGALTDRLLAMGDEGKVTVVERDRE 78
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
+ E L AD L VI DAL+ + P+F ++N+PYG+SS + +L+ R
Sbjct: 79 LAEFLREEFADEIAAGNLTVIEGDALEVDLPEFTASLSNLPYGVSSEITFRLL---PEGR 135
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
L+ Q+EFA R++A PG SE+ RL+V+ + A E V + K F P P V+S+VV +
Sbjct: 136 PLVLMFQREFAERMVAEPGTSEYGRLSVSTQHYAAPEIVETIPKEAFSPPPAVESAVVRL 195
Query: 184 RPKAEIPDVNLDE-WRAFTRTCFSKKNKTL 212
P+ +V +E + F + F+++ KT+
Sbjct: 196 EPRDPDYEVGDEEFFLRFVKALFTQRRKTI 225
>gi|241662027|ref|YP_002980387.1| dimethyladenosine transferase [Ralstonia pickettii 12D]
gi|240864054|gb|ACS61715.1| dimethyladenosine transferase [Ralstonia pickettii 12D]
Length = 281
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 119/230 (51%), Gaps = 15/230 (6%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQ+ L + V+ +IV PDD ++EIGPG G LT+ L+E + + +E+D +V
Sbjct: 16 KRFGQNFLVDDGVIHAIVAAIDPKPDDVLVEIGPGLGALTVPLMERVRTLQVVELDRDLV 75
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDLV------VANIPYGISSPLVAKLVYGT 119
L +R F DRL V + DAL +F V V N+PY ISSPL+ L
Sbjct: 76 ARLQKR-----FGDRLVVHAGDALAFDFGALQEVDRPLRIVGNLPYNISSPLLFHLATFA 130
Query: 120 KSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSS 179
R +LQKE R++A+PG F+RL+V +++ +E V+DV F P PKVDS+
Sbjct: 131 DRVRDQHFMLQKEVVDRMVAAPGSKAFSRLSVMLQVRYYMELVLDVPPGSFNPPPKVDSA 190
Query: 180 VVIIRP----KAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIEL 225
VV + P K+ V++ FS++ K L T + V++
Sbjct: 191 VVRMIPWPADKSPYAPVDMRALGTVVTMAFSQRRKVLRNTLGALRDVVDF 240
>gi|225571219|ref|ZP_03780217.1| hypothetical protein CLOHYLEM_07308 [Clostridium hylemonae DSM
15053]
gi|225160050|gb|EEG72669.1| hypothetical protein CLOHYLEM_07308 [Clostridium hylemonae DSM
15053]
Length = 291
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 127/242 (52%), Gaps = 22/242 (9%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K GQ+ L + VLD I+R + I +D VLEIGPG G +T L E + KV A+EID+
Sbjct: 23 FQKKFGQNFLIDTHVLDKIIRAADITKEDMVLEIGPGIGTMTQYLAEAAGKVVAVEIDKN 82
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL---------VVANIPYGISSPLVAK 114
++ IL D +D + VI++D LK + + VVAN+PY I++P++
Sbjct: 83 LIPILTDTLHD---YDNVTVINEDVLKLDVRELAREENGGRPLKVVANLPYYITTPIIMG 139
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
L S T+++QKE A R+ PG+ ++ L++ V+ A+ V +V F+P P
Sbjct: 140 LFENDVPVESITVMVQKEVADRMQTGPGNKDYGALSLAVQYYAEPYIVANVPPNCFMPRP 199
Query: 175 KVDSSVVII----RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLSK 230
+V S+V+ + +P E+ D L R F+++ KTL K L L+K
Sbjct: 200 RVGSAVIRLTRHEKPPVEVKDEKL--MFDIIRASFNQRRKTLANGLNNSDK----LSLAK 253
Query: 231 QK 232
++
Sbjct: 254 EE 255
>gi|222152162|ref|YP_002561322.1| dimethyladenosine transferase [Macrococcus caseolyticus JCSC5402]
gi|254807873|sp|B9E8V8.1|RSMA_MACCJ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|222121291|dbj|BAH18626.1| dimethyladenosine transferase [Macrococcus caseolyticus JCSC5402]
Length = 296
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 133/248 (53%), Gaps = 27/248 (10%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + V+ +I+ + I+ V+EIGPG G+LT +L + +K+V A EID+R
Sbjct: 23 FKKSLGQNFLVDTNVIRNIIEAAGIDKTSGVIEIGPGMGSLTEQLAKHAKQVLAFEIDQR 82
Query: 64 MVEILNRRAADSGFHDRLNVISKDALK--------TEFPQFD--LVVANIPYGISSPLVA 113
++ IL + +D + VI++D LK T D VVAN+PY I++P++
Sbjct: 83 LIPILGETLSP---YDNVTVINEDILKADVASAIETYLHHCDEIFVVANLPYYITTPILM 139
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ + S +++QKE RL A P + L++ V+ DV+ +M V K F+P
Sbjct: 140 GLLEKNLNINSYVVMMQKEVGERLSAIPSTKAYGSLSIAVQYYTDVKRIMVVPKGVFMPP 199
Query: 174 PKVDSSVVII----RPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATF--------KQKKK 221
P VDS VV + RP+ ++ D NL + TR F ++ KT+ + + K +
Sbjct: 200 PNVDSLVVKLTTLERPRVDVEDENL--FFKLTRGAFVQRRKTILNNYMSLIQDSKEHKSR 257
Query: 222 VIELLRLS 229
+IE L S
Sbjct: 258 IIEWLEAS 265
>gi|407717887|ref|YP_006795292.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Leuconostoc
carnosum JB16]
gi|407241643|gb|AFT81293.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Leuconostoc carnosum JB16]
Length = 295
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 122/220 (55%), Gaps = 18/220 (8%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQ+ LT+ +L IV + I DD VLEIGPG G+LT +L +KKV A+EID +MV
Sbjct: 26 KKLGQNFLTDLNILHGIVDTAEITNDDFVLEIGPGIGSLTEQLARAAKKVVALEIDSQMV 85
Query: 66 EILNRRAADSGFHDRLNVISKDALK--------TEFPQFDLV--VANIPYGISSPLVAKL 115
+L+ +D + VI D LK EF Q V VAN+PY I++P++ +L
Sbjct: 86 AVLSDTLQP---YDNVKVIENDVLKVDLNELIAAEFGQNATVKVVANLPYYITTPILMQL 142
Query: 116 VYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPK 175
+ S+ + +++Q+E A RL A PG E+ L + ++ A + M V+ F P P
Sbjct: 143 LRANISWDNIVVMMQREVADRLNAMPGTKEYGVLTLTLQYFAQAQLAMKVAAASFNPAPN 202
Query: 176 VDSSVVIIRPKAEIPDVNLDE-WRAF--TRTCFSKKNKTL 212
VDS+VV + P P++ +D+ R F + FS + K+L
Sbjct: 203 VDSAVVKLTPLT--PEIVVDQPERLFGVIKGSFSHRRKSL 240
>gi|291526466|emb|CBK92053.1| dimethyladenosine transferase [Eubacterium rectale DSM 17629]
Length = 292
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 132/245 (53%), Gaps = 26/245 (10%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K GQ+ L + +L+ I+ + I DD +LEIGPG G +T L E +++V A+EID
Sbjct: 21 FQKKFGQNFLIDTGILEEIIDSAGITKDDMILEIGPGIGTMTQYLCESARQVIAVEIDTN 80
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL---------VVANIPYGISSPLVAK 114
++ IL ++ +D + VI+ D LK + VVAN+PY I++P++
Sbjct: 81 LIPILKDTLSE---YDNVKVINDDILKVDINALAEEYNNGKPIKVVANLPYYITTPIIMG 137
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
L S T+++QKE A R+ A PG ++ L++ V+ + E V++V F+P P
Sbjct: 138 LFESHVPIDSITIMVQKEVADRMQAGPGKKDYGALSLAVQYYSHPEIVVNVPPSCFMPQP 197
Query: 175 KVDSSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTL----------GATFKQKKK 221
KV SSV+ ++ + E P V++D+ + R F+++ KTL G T +Q ++
Sbjct: 198 KVGSSVISLK-RYEKPVVDVDDEKLMFKIIRASFNQRRKTLANGLNNFGGMGLTKEQIQQ 256
Query: 222 VIELL 226
IE L
Sbjct: 257 SIEAL 261
>gi|239616459|ref|YP_002939781.1| dimethyladenosine transferase [Kosmotoga olearia TBF 19.5.1]
gi|239505290|gb|ACR78777.1| dimethyladenosine transferase [Kosmotoga olearia TBF 19.5.1]
Length = 272
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/222 (36%), Positives = 124/222 (55%), Gaps = 10/222 (4%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I S GQ+ + ++R+L IV+ S I + TV+EIG G G LTLKL + +KKV EID
Sbjct: 12 IHLKDSLGQNFIKDERILSRIVKDSGITDEATVIEIGIGLGTLTLKLAKKAKKVIGFEID 71
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFD----LVVANIPYGISSPLVAKLVY 117
+R +I +D + +I +D LK + +D VANIPY I+SP++ K+++
Sbjct: 72 KRFEQIHKELLSDKN----IQIIYEDFLKADLKDYDSRPLFYVANIPYYITSPILEKILF 127
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
+F +A L++QKE+A RLLA P + L V + V + +VS++ F+P P VD
Sbjct: 128 EGPAFEAAILMVQKEYAERLLAKPSSKSYGALTVTIGAFTMVRRLFNVSRKAFIPAPAVD 187
Query: 178 SSVV--IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
SSVV I+R + +P +R F + FS + K L K
Sbjct: 188 SSVVKLIMREQTLVPLNEKRRFRNFVKLAFSHRRKKLKNNLK 229
>gi|302390854|ref|YP_003826674.1| dimethyladenosine transferase [Acetohalobium arabaticum DSM 5501]
gi|302202931|gb|ADL11609.1| dimethyladenosine transferase [Acetohalobium arabaticum DSM 5501]
Length = 290
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 129/231 (55%), Gaps = 21/231 (9%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I KS GQ+ L ++ ++D I+ + + D V+EIGPG G+LT +L E +K V AIE+D
Sbjct: 20 IQLKKSLGQNFLVDRNIIDKIIVSADLTSYDHVIEIGPGIGSLTQRLAEGAKAVWAIELD 79
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL--------VVANIPYGISSPLVA 113
ER ++IL ++ ++ +N I DAL+ +F Q VVAN+PY I++P++
Sbjct: 80 ERFIKILEENLSN---YNNVNFIQADALEYDFEQLLTKLSGESIKVVANLPYYITTPIIM 136
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDS-EFNRLAVNVKLVADVEFVMDVSKRDFLP 172
+L+ F +++QKE A R++A+P D ++ L++ V+ + E V + F+P
Sbjct: 137 RLLEEKLPFERVVVMVQKEVAERIVATPEDGKKYGSLSLAVRYYSQPEITGTVPRTVFMP 196
Query: 173 CPKVDSSVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVI 223
PKVDS++V + + + P DE F K + A F+Q++K I
Sbjct: 197 QPKVDSAIVKMEIRDKPPVEVKDEELLF---------KVIQAAFQQRRKTI 238
>gi|374635706|ref|ZP_09707299.1| dimethyladenosine transferase [Methanotorris formicicus Mc-S-70]
gi|373561322|gb|EHP87559.1| dimethyladenosine transferase [Methanotorris formicicus Mc-S-70]
Length = 274
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 121/210 (57%), Gaps = 8/210 (3%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQ L ++ + V ++ IN +D VLEIG G G LT +L + +KKV+ IEIDE +
Sbjct: 15 KKLGQCFLIDKNFVKKAVEEAEINKEDIVLEIGLGKGILTEELAKNAKKVYVIEIDEGLK 74
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQ--FDLVVANIPYGISSPLVAKLVYGTKSFR 123
+ +D + +I +DALK + F+ VVAN+PY ISSP+ KL+ +F
Sbjct: 75 PYAEKIKEK---YDNVEIIWEDALKIDLNNLGFNKVVANLPYQISSPITFKLL--KTNFD 129
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
A L+ Q EFA+R++A G +++RL+V V+ ADVEF+ V F P PKV+S++V I
Sbjct: 130 IAVLMYQYEFAKRMVAKEGTKDYSRLSVAVQYKADVEFICKVPPSAFSPRPKVNSAIVKI 189
Query: 184 RPKAEIPDVNLDE-WRAFTRTCFSKKNKTL 212
+ + V +E + R F KNKT+
Sbjct: 190 VKREPLFKVENEEFFENVLRALFQHKNKTV 219
>gi|291526963|emb|CBK92549.1| dimethyladenosine transferase [Eubacterium rectale M104/1]
Length = 288
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 132/245 (53%), Gaps = 26/245 (10%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K GQ+ L + +L+ I+ + I DD +LEIGPG G +T L E +++V A+EID
Sbjct: 21 FQKKFGQNFLIDTGILEEIIDSAGITKDDMILEIGPGIGTMTQYLCESARQVIAVEIDTN 80
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL---------VVANIPYGISSPLVAK 114
++ IL ++ +D + VI+ D LK + VVAN+PY I++P++
Sbjct: 81 LIPILKDTLSE---YDNVKVINDDILKVDINALAEEYNNGKPIKVVANLPYYITTPIIMG 137
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
L S T+++QKE A R+ A PG ++ L++ V+ + E V++V F+P P
Sbjct: 138 LFESHVPIDSITIMVQKEVADRMQAGPGKKDYGALSLAVQYYSHPEIVVNVPPSCFMPQP 197
Query: 175 KVDSSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTL----------GATFKQKKK 221
KV SSV+ ++ + E P V++D+ + R F+++ KTL G T +Q ++
Sbjct: 198 KVGSSVISLK-RYEKPVVDVDDEKLMFKIIRASFNQRRKTLANGLNNFGGMGLTKEQIQQ 256
Query: 222 VIELL 226
IE L
Sbjct: 257 SIEAL 261
>gi|153811992|ref|ZP_01964660.1| hypothetical protein RUMOBE_02385 [Ruminococcus obeum ATCC 29174]
gi|149831891|gb|EDM86977.1| dimethyladenosine transferase [Ruminococcus obeum ATCC 29174]
Length = 290
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 121/230 (52%), Gaps = 14/230 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K GQ+ L + RVLD I+ S I DD VLEIGPG G +T L + +++V A+EID+
Sbjct: 23 FQKRFGQNFLIDTRVLDRIIEASEITKDDFVLEIGPGIGTMTQYLADAAREVTAVEIDDA 82
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFD---------LVVANIPYGISSPLVAK 114
++ IL + D ++VI D LKT+ + VVAN+PY I++P++
Sbjct: 83 LIPILQDTLKE---WDNVSVIHGDILKTDIRKIADEKNQGRPIKVVANLPYYITTPIIMG 139
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
L S T+++QKE A R+ PG ++ L++ V+ A E V +V F+P P
Sbjct: 140 LFESHVPVDSITVMVQKEVADRMQTGPGSKDYGALSLAVQYYAKPEIVANVPPNCFMPRP 199
Query: 175 KVDSSVVIIRPKAEIPDVNLDEWRAF--TRTCFSKKNKTLGATFKQKKKV 222
KV S+V+ + P DE F R F+++ KTL K +++
Sbjct: 200 KVGSAVIRLTRHQNPPVQAKDEKLMFRIIRASFNQRRKTLANGLKNSQEL 249
>gi|87302768|ref|ZP_01085579.1| putative rRNA (adenine-N6,N6)-dimethyltransferase [Synechococcus
sp. WH 5701]
gi|87282651|gb|EAQ74609.1| putative rRNA (adenine-N6,N6)-dimethyltransferase [Synechococcus
sp. WH 5701]
Length = 286
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 113/215 (52%), Gaps = 16/215 (7%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVS-KKVHAIEIDERMVEI 67
GQH LT+ VL+ IV + + P + VLE+GPG G LT +LL + ++HAIE+D +V
Sbjct: 13 GQHWLTDAAVLERIVAAAELQPGERVLEVGPGRGALTERLLATALGELHAIELDRDLVAG 72
Query: 68 LNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYG-----TKSF 122
L + A +R ++ D L+ P D VVANIPY I+ PL+ +LV +
Sbjct: 73 LRQHFAGD---ERFQLLEGDVLRLNLPPADKVVANIPYNITGPLLERLVGRLDRPLASPY 129
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
R LL+Q+E R+ A G S F+ L+V ++L+A V V R F P PKV S V++
Sbjct: 130 RRLVLLVQQEVGERIRAVAGSSAFSALSVRLQLLAHCRSVCAVPPRCFQPSPKVMSEVIV 189
Query: 183 IRPKAEIPDVNLD-----EWRAFTRTCFSKKNKTL 212
I P P L+ + CF+ + K L
Sbjct: 190 IDPLP--PSERLEPELAGRLEGLLKRCFAARRKML 222
>gi|54298928|ref|YP_125297.1| dimethyladenosine transferase [Legionella pneumophila str. Paris]
gi|148361259|ref|YP_001252466.1| dimethyladenosine transferase [Legionella pneumophila str. Corby]
gi|296108598|ref|YP_003620299.1| dimethyladenosine transferase [Legionella pneumophila 2300/99
Alcoy]
gi|397668608|ref|YP_006510145.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Legionella pneumophila subsp. pneumophila]
gi|62900488|sp|Q5X0V1.1|RSMA_LEGPA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|166221673|sp|A5IIC0.1|RSMA_LEGPC RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|53752713|emb|CAH14148.1| hypothetical protein lpp2995 [Legionella pneumophila str. Paris]
gi|148283032|gb|ABQ57120.1| dimethyladenosine transferase [Legionella pneumophila str. Corby]
gi|295650500|gb|ADG26347.1| dimethyladenosine transferase [Legionella pneumophila 2300/99
Alcoy]
gi|395132019|emb|CCD10312.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Legionella pneumophila subsp. pneumophila]
Length = 256
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/219 (36%), Positives = 117/219 (53%), Gaps = 12/219 (5%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINP--DDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
K GQ+ L ++ +++ I+R +INP DD +LEIGPG G LT LL+ ++ AIEID
Sbjct: 7 KRFGQNFLQDKYIINEILR--AINPLADDNMLEIGPGLGALTQPLLQKLNRLTAIEIDTD 64
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFD---LVVANIPYGISSPLVAKLVYGTK 120
+ L R G +LN+I DAL +F QF VV N+PY IS+PL+ L+
Sbjct: 65 LQNYLTRLPVSQG---KLNLIPADALTVDFCQFGPHLRVVGNLPYNISTPLLIYLLKFIT 121
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
+LQKE R+ A+ G + RL+V ++ +VE++ DV F P PKVDS++
Sbjct: 122 CIDDMHFMLQKEVVERIAATHGTKAYGRLSVMLQYHCEVEYLFDVPPEAFEPKPKVDSAI 181
Query: 181 VIIRPKAEIP--DVNLDEWRAFTRTCFSKKNKTLGATFK 217
V + P P VN ++ F+ + KTL K
Sbjct: 182 VRLTPYRVSPFESVNTEKLENIVAKAFAMRRKTLTNNLK 220
>gi|373859308|ref|ZP_09602038.1| dimethyladenosine transferase [Bacillus sp. 1NLA3E]
gi|372450977|gb|EHP24458.1| dimethyladenosine transferase [Bacillus sp. 1NLA3E]
Length = 293
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 118/221 (53%), Gaps = 15/221 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + +L IV + I + +EIGPG G LT +L SKKV A EID+R
Sbjct: 22 FKKSLGQNFLIDPNILKRIVDHAEITEETGTIEIGPGIGALTEQLARSSKKVVAFEIDQR 81
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFD----------LVVANIPYGISSPLVA 113
++ ILN + + VI +D LK + +VVAN+PY +++P++
Sbjct: 82 LLPILNETLDP---YSNVEVIHQDVLKADVKTVMEDRLSDIKDVMVVANLPYYVTTPIIM 138
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
KL+ R ++LQKE A R+ A+PG ++ L++ V+ E VM V K F+P
Sbjct: 139 KLLEEKLPIRGIVVMLQKEVAERITANPGTKDYGSLSIAVQYYTKAEIVMTVPKTVFVPQ 198
Query: 174 PKVDSSVVIIRPKAEIPDVNLDEWRAF--TRTCFSKKNKTL 212
P VDS+V+ + + P +DE F + F+++ KT+
Sbjct: 199 PNVDSAVIRLTVRENPPVTMIDEAFFFRVIKMSFAQRRKTI 239
>gi|52078537|ref|YP_077328.1| dimethyladenosine transferase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|319648566|ref|ZP_08002780.1| dimethyladenosine transferase [Bacillus sp. BT1B_CT2]
gi|404487407|ref|YP_006711513.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|423680435|ref|ZP_17655274.1| dimethyladenosine transferase [Bacillus licheniformis WX-02]
gi|62900505|sp|Q65PH9.1|RSMA_BACLD RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|52001748|gb|AAU21690.1| dimethyladenosine transferase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52346401|gb|AAU39035.1| dimethyladenosine transferase RsmA [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|317389333|gb|EFV70146.1| dimethyladenosine transferase [Bacillus sp. BT1B_CT2]
gi|383441541|gb|EID49250.1| dimethyladenosine transferase [Bacillus licheniformis WX-02]
Length = 292
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 124/222 (55%), Gaps = 17/222 (7%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + +LD IV + + V+EIGPG G LT +L + +KKV A EID+R
Sbjct: 22 FKKSLGQNFLIDTNILDRIVDHAGVTERTGVIEIGPGIGALTEQLAKRAKKVTAFEIDQR 81
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEF-----PQFD-----LVVANIPYGISSPLVA 113
++ IL + +D + VI +D LK + QF +VVAN+PY +++P++
Sbjct: 82 LLPILEDTLSP---YDNVTVIHQDVLKADVRAVMDEQFQDCDEVMVVANLPYYVTTPIIM 138
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
KL+ + ++LQKE A R+ A P E+ L++ V+ + + VM+V K F+P
Sbjct: 139 KLLEENLPLKGIVVMLQKEVADRMAAKPSSKEYGSLSIAVQFYTEAKTVMNVPKTVFVPQ 198
Query: 174 PKVDSSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTL 212
P VDS+V+ + + E P V + + F + F+++ KTL
Sbjct: 199 PNVDSAVIRLTLRKE-PAVAVQDAAFFFQVVKASFAQRRKTL 239
>gi|126459717|ref|YP_001055995.1| dimethyladenosine transferase [Pyrobaculum calidifontis JCM 11548]
gi|126249438|gb|ABO08529.1| dimethyladenosine transferase [Pyrobaculum calidifontis JCM 11548]
Length = 230
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 113/203 (55%), Gaps = 11/203 (5%)
Query: 10 QHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILN 69
QH L ++ V + IV + P VLE+GPG G LT+ L E S+ V+AIEID + E L
Sbjct: 9 QHFLKSREVAEFIV--GLVPPGLDVLEVGPGRGALTIPLAEKSRVVYAIEIDRGLAEELR 66
Query: 70 RRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLL 129
R A + + VI DAL+ E+P V+N+PY I+SPL+ KL + A + +
Sbjct: 67 RAAPPN-----VVVIVGDALEVEWPPAQYFVSNVPYEITSPLLLKL---ARHRLPAVVTV 118
Query: 130 QKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAEI 189
QKE A RL A PG E+ RL V V+ DVE V + F P PKV S+VV + P+
Sbjct: 119 QKEVADRLAAEPGTEEYGRLTVAVRCHYDVEVVRVLPPHAFSPPPKVYSAVVRLTPRPPC 178
Query: 190 PDVNLDEWRAFTRTCFSKKNKTL 212
+ + + ++ FT FS + KTL
Sbjct: 179 IE-DFEGFQRFTAALFSARRKTL 200
>gi|336392333|ref|ZP_08573732.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Lactobacillus coryniformis subsp. torquens KCTC 3535]
Length = 296
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 121/221 (54%), Gaps = 15/221 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ LT +L I + + D VLEIGPG G+LT +L + + +V A+EID+R
Sbjct: 25 FKKSLGQNFLTEPTILRQIASAAELTTADDVLEIGPGIGSLTEQLAQNAHQVLALEIDQR 84
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFP-----QFD-----LVVANIPYGISSPLVA 113
++ IL A +D + V+++D LK++ FD VVAN+PY I++P++
Sbjct: 85 LLPILADTLAP---YDNVTVLNQDVLKSDLATLIRDHFDGQHKVKVVANLPYYITTPILL 141
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
+L+ +F +++QKE A RL A PG + L+V V+ V+ V K F+P
Sbjct: 142 RLLESGVTFDQIVVMMQKEVAERLAADPGSKAYGSLSVAVQYQMTVKLAFIVPKTVFVPQ 201
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTL 212
P VDS++V + P V DE + R F+++ K+L
Sbjct: 202 PNVDSAIVSLTRHVTPPAVATDEKVFARLVRGSFAQRRKSL 242
>gi|260893941|ref|YP_003240038.1| dimethyladenosine transferase [Ammonifex degensii KC4]
gi|260866082|gb|ACX53188.1| dimethyladenosine transferase [Ammonifex degensii KC4]
Length = 297
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/224 (39%), Positives = 124/224 (55%), Gaps = 24/224 (10%)
Query: 5 HKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERM 64
K GQH L + VL IV + ++P DTV+E+GPG G LT +LLE + KV AIE+D R+
Sbjct: 26 RKRWGQHFLVRREVLAKIVEAAELSPADTVVEVGPGLGVLTARLLEKAGKVVAIELDPRL 85
Query: 65 VEILNRRAADSGFHDRLNVISKDALKTEFPQFDL------------VVANIPYGISSPLV 112
L R G H RL ++ DAL+ +F DL VVAN+PY ++SPL+
Sbjct: 86 EAFLRAR---FGEHPRLTLVRGDALECDF---DLLVQEARGFFPYKVVANLPYYLTSPLL 139
Query: 113 AKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
+L+ L+LQKE A RLLASPG E+ L++ V+ V VS+ F P
Sbjct: 140 LRLLTSPWRISLLVLMLQKEVALRLLASPGTKEYGSLSLLVQYRTLPSLVTFVSRHSFYP 199
Query: 173 CPKVDSSVVII----RPKAEIPDVNLDEWRAFTRTCFSKKNKTL 212
P+VDS+VV + RP E+ D ++ + R F+K+ KTL
Sbjct: 200 PPEVDSAVVRLEVRTRPSVEVGDESV--FFGVVRAAFAKRRKTL 241
>gi|448578417|ref|ZP_21643852.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloferax larsenii JCM 13917]
gi|445726958|gb|ELZ78574.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloferax larsenii JCM 13917]
Length = 287
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 117/212 (55%), Gaps = 15/212 (7%)
Query: 8 KGQHILTNQRVLDSIVRKSSINPDDT----VLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
+ QH L + RV+D I + P+DT VLEIG G G LT +LL+V+ +V +E D
Sbjct: 32 RDQHFLVDDRVVDRI---PTYLPEDTDLSHVLEIGGGPGVLTDRLLDVADRVTVVEQDRT 88
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFR 123
+ L R A+ RL V+ DAL+ + P F V+N+PYGISS + +L+ K
Sbjct: 89 FADHLRREFAEEVEAGRLTVLEGDALEIDLPDFSACVSNLPYGISSEISFRLLPEGKPL- 147
Query: 124 SATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVII 183
L+ QKEF R+ A G SE+ RL+V+ + DV+ V + F P P V S++V I
Sbjct: 148 --VLMFQKEFGERMAAESGTSEYGRLSVSAQHYGDVDVCEIVPREAFDPQPAVQSAIVRI 205
Query: 184 RPKAEIPDVNLDE---WRAFTRTCFSKKNKTL 212
P+A PD +D+ + F + F+++ KT+
Sbjct: 206 EPRA--PDYEVDDEEFFLDFVKALFTQRRKTI 235
>gi|298492284|ref|YP_003722461.1| dimethyladenosine transferase ['Nostoc azollae' 0708]
gi|298234202|gb|ADI65338.1| dimethyladenosine transferase ['Nostoc azollae' 0708]
Length = 277
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 121/222 (54%), Gaps = 15/222 (6%)
Query: 5 HKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERM 64
K QH L +++ L++IV+ + D VLEIGPGTG LT +LL + + A+EID +
Sbjct: 5 RKQFAQHWLKSEKALNTIVKAAECQETDRVLEIGPGTGILTRRLLPLVHSLLAVEIDPDL 64
Query: 65 VEILNRRAAD-------SGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVY 117
++L ++ + G LNV S+ ++F + + VVANIPY I+ P++ KL+
Sbjct: 65 CKLLVKQLGERENFLLLQGDFLTLNVPSQLTAFSKFQKQNKVVANIPYNITGPIIEKLL- 123
Query: 118 GT------KSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFL 171
GT + + S LL+QKE A RL A PG F L++ V+ +AD E + V F
Sbjct: 124 GTIASPNPEPYDSIVLLVQKEVAERLYAKPGSRSFGALSLRVQYLADCELICSVPAGAFY 183
Query: 172 PCPKVDSSVVIIRPKA-EIPDVNLDEWRAFTRTCFSKKNKTL 212
P PKVDS+VV + P+ EIP + + + F K K L
Sbjct: 184 PPPKVDSAVVRLLPRQIEIPVNDPKKLENLVKLGFGSKRKML 225
>gi|72160809|ref|YP_288466.1| dimethyladenosine transferase [Thermobifida fusca YX]
gi|119365858|sp|Q47SX4.1|RSMA_THEFY RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|71914541|gb|AAZ54443.1| dimethyladenosine transferase [Thermobifida fusca YX]
Length = 287
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 116/213 (54%), Gaps = 6/213 (2%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K+ GQ+ + + + IVR + ++PDD V+E+GPG G+LTL LL + V A+EID R+
Sbjct: 30 KTLGQNFVIDPGTVRRIVRAAQVSPDDVVVEVGPGLGSLTLALLPHVRHVTAVEIDPRLA 89
Query: 66 EILNRRAAD--SGFHDRLNVISKDALK-TEF--PQFDLVVANIPYGISSPLVAKLVYGTK 120
E L AD + RL V++ DAL+ TE PQ +VAN+PY ++ P+V L+
Sbjct: 90 EALPGTVADHAPAYAHRLRVVTADALRITELPDPQPTALVANLPYNVAVPVVLHLLNLLP 149
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
S +++Q E A RL A PGD + + + ADV + + F P P VDS +
Sbjct: 150 SLEHGLVMVQAEVAERLAARPGDRAYGAPSAKIAWYADVRRAGAIGRTVFWPVPNVDSGL 209
Query: 181 VIIRPKAEIPD-VNLDEWRAFTRTCFSKKNKTL 212
V +R + P + ++ A F+++ KTL
Sbjct: 210 VALRRRPAPPTKASREDVFAVVDAAFAQRRKTL 242
>gi|300705123|ref|YP_003746726.1| s-adenosylmethionine-6-n',n'-adenosyl (rRNA) dimethyltransferase
[Ralstonia solanacearum CFBP2957]
gi|299072787|emb|CBJ44142.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Ralstonia solanacearum CFBP2957]
Length = 281
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 119/230 (51%), Gaps = 15/230 (6%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQ+ L + V+ +IV PDD ++EIGPG G LT+ L+E + +E+D +V
Sbjct: 16 KRFGQNFLVDDGVIHAIVAAIDPQPDDVLVEIGPGLGALTVPLMERVPTLQVVELDRDLV 75
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDL------VVANIPYGISSPLVAKLVYGT 119
L RR F D+L V + DAL +F + +V N+PY ISSPL+ L
Sbjct: 76 ARLQRR-----FGDKLVVHAGDALAFDFGALHVPGRPLRIVGNLPYNISSPLLFHLSAFA 130
Query: 120 KSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSS 179
R +LQKE R++A+PG F+RL+V +++ +E V+DV F P PKVDS+
Sbjct: 131 DRVRDQHFMLQKEVVERMVAAPGSKAFSRLSVMLQVRYYMELVLDVPPGSFNPPPKVDSA 190
Query: 180 VVIIRP----KAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIEL 225
VV + P K+ V++ FS++ K L T ++ I+
Sbjct: 191 VVRMIPWPADKSPYAPVDMRALGTVVALAFSQRRKVLRNTLGSLREAIDF 240
>gi|218780962|ref|YP_002432280.1| dimethyladenosine transferase [Desulfatibacillum alkenivorans
AK-01]
gi|218762346|gb|ACL04812.1| dimethyladenosine transferase [Desulfatibacillum alkenivorans
AK-01]
Length = 289
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 118/214 (55%), Gaps = 8/214 (3%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K+KGQ+ L + + V ++ ++PDD+VLEIGPG G LT+ + +K+V A+E D +
Sbjct: 26 KAKGQNFLADPATARACVERADLSPDDSVLEIGPGLGALTIPMSRKAKQVIAVEWDTNLA 85
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFD-------LVVANIPYGISSPLVAKLVYG 118
++L + G + + ++++D LKT+ +V AN+PY ISS ++ +L+
Sbjct: 86 KVLENQIESLGLSN-ITILNQDILKTDIRGIAERAGGNMVVAANLPYNISSQVLIRLIQN 144
Query: 119 TKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDS 178
F+ A L+ Q E A+R++A PG ++ R+ V + + + + + F P P+VDS
Sbjct: 145 RDLFKKAALMFQTELAQRIMAEPGGKDYGRITVLAQYSSRIRVLYSLGPAHFYPKPQVDS 204
Query: 179 SVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTL 212
V+ K P VN D A + F+K+ KTL
Sbjct: 205 QVLEFLFKEPDPSVNEDILFAVVKAAFAKRRKTL 238
>gi|420145311|ref|ZP_14652781.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
coryniformis subsp. coryniformis CECT 5711]
gi|398403087|gb|EJN56362.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
coryniformis subsp. coryniformis CECT 5711]
Length = 296
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 121/221 (54%), Gaps = 15/221 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ LT +L I + + D VLEIGPG G+LT +L + + +V A+EID+R
Sbjct: 25 FKKSLGQNFLTEPTILRQIASAAELTTADDVLEIGPGIGSLTEQLAQNAHQVLALEIDQR 84
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFP-----QFD-----LVVANIPYGISSPLVA 113
++ IL A +D + V+++D LK++ FD VVAN+PY I++P++
Sbjct: 85 LLPILADTLAP---YDNVTVLNQDVLKSDLATLIRDHFDGQHKVKVVANLPYYITTPILL 141
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
+L+ +F +++QKE A RL A PG + L+V V+ V+ V K F+P
Sbjct: 142 RLLESGVAFDQIVVMMQKEVAERLAADPGSKAYGSLSVAVQYQMTVKLAFIVPKTVFVPQ 201
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTL 212
P VDS++V + P V DE + R F+++ K+L
Sbjct: 202 PNVDSAIVSLTRHVTPPAVATDEKVFARLVRGSFAQRRKSL 242
>gi|339625306|ref|ZP_08661095.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Fructobacillus fructosus KCTC 3544]
Length = 295
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 116/222 (52%), Gaps = 14/222 (6%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQ+ LT+ +L IV+ + + +D V+EIGPG G LT L +KKV A EID MV+IL
Sbjct: 29 GQNFLTDGNILSGIVQAADLTKEDLVVEIGPGIGGLTEYLARAAKKVLAFEIDPDMVKIL 88
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDL----------VVANIPYGISSPLVAKLVYG 118
A +D + ++ +D L+ + VVAN+PY I++P++ L+
Sbjct: 89 AETLAP---YDNVQIVEQDVLEADLKTVLAESFGEKSAVKVVANLPYYITTPILLALLQA 145
Query: 119 TKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDS 178
+ +++QKE A RL A PG E+ L V + A V + V + F P P VDS
Sbjct: 146 GIHWEKLVVMMQKEVADRLSAKPGTKEYGVLTVMLDYYASVAIALKVPAKAFNPSPNVDS 205
Query: 179 SVVIIRPK-AEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQK 219
+VV + PK AE P + + + + CF+ + K+L Q+
Sbjct: 206 AVVTLTPKPAEKPVDHPKQLFSLVKACFAHRRKSLWNNLLQR 247
>gi|389577031|ref|ZP_10167059.1| dimethyladenosine transferase [Eubacterium cellulosolvens 6]
gi|389312516|gb|EIM57449.1| dimethyladenosine transferase [Eubacterium cellulosolvens 6]
Length = 299
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 122/221 (55%), Gaps = 14/221 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K GQ+ L + VL+ IVR + I+ DD V+EIGPG G LT L +++V A+EID+
Sbjct: 31 FQKKFGQNFLIDPHVLEKIVRAADISEDDCVMEIGPGIGTLTQYLARYAREVFAVEIDKN 90
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL---------VVANIPYGISSPLVAK 114
++ IL D + VI++D LK + Q VVAN+PY I++P++ +
Sbjct: 91 LIPILTEDTLKD--WDNVTVINEDCLKVDMKQLVEEHNGGKPVKVVANLPYYITTPILME 148
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
L+ F S T+++QKE A R+ A PG ++ L++ V+ E + +V F+P P
Sbjct: 149 LLEKHVPFESITVMVQKEVADRMQAGPGSKDYGALSLAVQYYTVPEIMANVPPNCFIPRP 208
Query: 175 KVDSSVVIIRPKAEIPDVNL-DEWRAF--TRTCFSKKNKTL 212
V S+V+ ++ + E V + DE F R F+++ KTL
Sbjct: 209 NVGSAVIRLKGRTEENRVQVQDEHLMFRLIRASFAQRRKTL 249
>gi|342215032|ref|ZP_08707701.1| dimethyladenosine transferase [Veillonella sp. oral taxon 780 str.
F0422]
gi|341590138|gb|EGS33387.1| dimethyladenosine transferase [Veillonella sp. oral taxon 780 str.
F0422]
Length = 287
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 117/224 (52%), Gaps = 12/224 (5%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I K GQ+ L + V+D IV+ + + D VLE+GPG G LT L + V ++E+D
Sbjct: 21 IQMSKKLGQNFLIKRTVVDKIVQAAELEVGDAVLEVGPGIGTLTQGLAQSGANVTSVELD 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFD-----LVVANIPYGISSPLVAKLV 116
R++E+L+ +D + +I D LK P+ VVAN+PY I++P++ L+
Sbjct: 81 RRLLEVLDTTLEA---YDNVRIIHGDVLKVNIPELMDHKPFKVVANLPYYITTPIIMSLL 137
Query: 117 YGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKV 176
+++QKE A R++A PG + L+V V+ D VMDV + FLP P+V
Sbjct: 138 ESKLPIERLVVMVQKEVAERMIAKPGTKMYGALSVAVQYYTDPYIVMDVPPKAFLPAPEV 197
Query: 177 DSSVVIIRPKAEIPDVNLDEWRAFTRTC---FSKKNKTLGATFK 217
S+V+ ++E P V + F R F+++ KT T K
Sbjct: 198 TSAVICCPLRSE-PPVKVHSEAYFFRAVKAGFAQRRKTFSNTMK 240
>gi|254429167|ref|ZP_05042874.1| dimethyladenosine transferase [Alcanivorax sp. DG881]
gi|196195336|gb|EDX90295.1| dimethyladenosine transferase [Alcanivorax sp. DG881]
Length = 270
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 113/215 (52%), Gaps = 12/215 (5%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQH L ++ ++D ++R + DT++EIGPG G LT LLE +H +E+D ++
Sbjct: 8 KRFGQHFLHDRNLVDRMIRTLGLQAGDTLVEIGPGRGALTYPLLEEIPHLHVVELDRDLI 67
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFD------LVVANIPYGISSPLVAKLVYGT 119
+L + DRL++ DAL+ +F V+ N+PY IS+PL+ L+
Sbjct: 68 ALLRQENTP----DRLSIHESDALRFDFRALKPADKPLRVIGNLPYNISTPLIFHLLAQA 123
Query: 120 KSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSS 179
+ T +LQKE RL ASPG ++ RL++ V+ +++ V F P P+VDS+
Sbjct: 124 DAISDMTFMLQKEVVERLTASPGTRDWGRLSIMVQYHCQADYLFFVPPEAFSPPPRVDSA 183
Query: 180 VVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTL 212
VV + P A P DE R F+++ K +
Sbjct: 184 VVRLIPHASPPHPADDEDHLRKLVAQAFTQRRKAI 218
>gi|299067921|emb|CBJ39135.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Ralstonia solanacearum CMR15]
Length = 281
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 120/230 (52%), Gaps = 15/230 (6%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQ+ L + V+ +IV PDD ++EIGPG G LT+ L+E + +E+D +V
Sbjct: 16 KRFGQNFLVDDGVIHAIVAAIDPQPDDVLVEIGPGLGALTVPLMERVPTLQVVELDRDLV 75
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDL------VVANIPYGISSPLVAKLVYGT 119
L RR F D+L V + DAL +F + +V N+PY ISSPL+ L
Sbjct: 76 ARLQRR-----FGDKLIVHAGDALAFDFGTLHVPGRSLRIVGNLPYNISSPLLFHLSAFA 130
Query: 120 KSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSS 179
R +LQKE R++A+PG F+RL+V +++ +E V++V F P PKVDS+
Sbjct: 131 DRVRDQHFMLQKEVVERMVAAPGSKAFSRLSVMLQVRYYMELVLEVPPGSFNPPPKVDSA 190
Query: 180 VVIIRP----KAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIEL 225
VV + P K+ V++ FS++ K L T ++VI+
Sbjct: 191 VVRMIPWPADKSPYAPVDMRALGTVVTLAFSQRRKVLRNTLGSLREVIDF 240
>gi|238593367|ref|XP_002393175.1| hypothetical protein MPER_07142 [Moniliophthora perniciosa FA553]
gi|215460264|gb|EEB94105.1| hypothetical protein MPER_07142 [Moniliophthora perniciosa FA553]
Length = 228
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 98/167 (58%), Gaps = 1/167 (0%)
Query: 60 IDERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGT 119
+D RM L +R RL ++ D +K + P FD+ ++N PY ISSPL+ +L+
Sbjct: 1 MDPRMAAELTKRVQGKPEQRRLEIMIGDFVKADLPYFDVCISNTPYQISSPLIFRLLSQR 60
Query: 120 KSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSS 179
R L+ Q+EFA RL+A G ++RL+ NV+L A V+++M V K +F P PKV+SS
Sbjct: 61 PLPRICILMFQREFALRLIAKAGSELWSRLSANVQLYAKVDYLMHVGKNNFRPPPKVESS 120
Query: 180 VVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELL 226
VV I P+ P V +E+ R FS++NKT+ A F K VI +L
Sbjct: 121 VVRIAPRDPPPPVKFEEFDGLGRIVFSRRNKTIHANF-MAKGVIPML 166
>gi|350554186|ref|ZP_08923315.1| Ribosomal RNA small subunit methyltransferase A [Thiorhodospira
sibirica ATCC 700588]
gi|349788320|gb|EGZ42325.1| Ribosomal RNA small subunit methyltransferase A [Thiorhodospira
sibirica ATCC 700588]
Length = 266
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 114/224 (50%), Gaps = 14/224 (6%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQH L + + IV + P DT++EIGPG G +T LLE ++ +E D ++
Sbjct: 7 KRLGQHFLHDANSIRRIVAAIAPRPGDTMVEIGPGLGAITRPLLEALGQLTVVEFDRDVI 66
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDL---------VVANIPYGISSPLVAKLV 116
+L AD G L V +DAL+ +F VV N+PY IS+PL+ L+
Sbjct: 67 PLLQAACADLG---DLRVHQQDALRFDFSSLATPDALQPALRVVGNLPYNISTPLLFHLL 123
Query: 117 YGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKV 176
+ + LLQKE RL A+PG + RL+V V+ VE + V F P P+V
Sbjct: 124 DSHQHIKDMHFLLQKEVVDRLSAAPGSEHYGRLSVMVQYRCQVEALFGVGPGAFRPPPRV 183
Query: 177 DSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFKQ 218
DS+VV + P A +P V DE + + F+++ KTL K+
Sbjct: 184 DSAVVRLLPYARLPCVAEDERQFAQLVQQAFAQRRKTLHNALKR 227
>gi|295689681|ref|YP_003593374.1| dimethyladenosine transferase [Caulobacter segnis ATCC 21756]
gi|295431584|gb|ADG10756.1| dimethyladenosine transferase [Caulobacter segnis ATCC 21756]
Length = 272
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 117/223 (52%), Gaps = 11/223 (4%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ KS GQH L + V I R + I DTV+E+GPG G LT LLE +V AIE D
Sbjct: 18 LMARKSFGQHFLLDLNVTRKIARLAQIGEGDTVVEVGPGPGGLTRALLETGARVVAIEKD 77
Query: 62 ERMVEILNRRA--ADSGFHDRLNVISKDALKTEFPQFD----LVVANIPYGISSPLVAKL 115
R + +L+ A AD RL ++ DALK + Q VV+N+PY + + L+
Sbjct: 78 SRFLPLLSEVAEVADG----RLELVEGDALKVDAAQAAGGPAHVVSNLPYNVGTQLLINW 133
Query: 116 VYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPK 175
+ G S TL+ QKE A R++A P D + RLAV + + + + VMD+ + F P PK
Sbjct: 134 LTGPFRPLSMTLMFQKEVADRIVAQPDDDAYGRLAVIAQTLCEAKTVMDLPAKAFTPPPK 193
Query: 176 VDSSVVIIRPKAEIPDVNL-DEWRAFTRTCFSKKNKTLGATFK 217
V S+VV + P+ + P + T F ++ K L ++ K
Sbjct: 194 VASAVVRLVPRQDPPPAEIVAALERVTAAAFGQRRKMLRSSLK 236
>gi|448622895|ref|ZP_21669544.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloferax denitrificans ATCC 35960]
gi|445753403|gb|EMA04820.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloferax denitrificans ATCC 35960]
Length = 287
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 112/210 (53%), Gaps = 15/210 (7%)
Query: 10 QHILTNQRVLDSIVRKSSINPDDT----VLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
QH L + RV+D I + P+D VLEIG G G LT +LL V+ +V +E D
Sbjct: 34 QHFLVDDRVVDRI---PTYLPEDADRSHVLEIGGGPGVLTDRLLGVADRVTVVEQDRTFA 90
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSA 125
E L R AD RL V+ DAL + P+F V+N+PYGISS + +L+ K
Sbjct: 91 EHLRREFADEVESGRLTVVEGDALDVDLPEFTACVSNLPYGISSEISFRLLPRGKPL--- 147
Query: 126 TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP 185
L+ QKEF R+ A G SE+ RL+V+ + DVE V + F P P V S VV I P
Sbjct: 148 VLMFQKEFGERMAAEAGTSEYGRLSVSTQHYGDVEVCEHVPREAFDPKPAVQSVVVRITP 207
Query: 186 KAEIPDVNLDE---WRAFTRTCFSKKNKTL 212
+ PD +D+ + F + F+++ KT+
Sbjct: 208 RD--PDYEVDDEAFFLDFVKALFTQRRKTI 235
>gi|167646487|ref|YP_001684150.1| dimethyladenosine transferase [Caulobacter sp. K31]
gi|167348917|gb|ABZ71652.1| dimethyladenosine transferase [Caulobacter sp. K31]
Length = 288
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 116/228 (50%), Gaps = 20/228 (8%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
+ +KS GQH L + + I R + + DTV+E+GPG G LT LLE +V A+E+D
Sbjct: 33 LLANKSFGQHFLLDLNITRKIARLAGVGEGDTVIEVGPGPGGLTRTLLETGARVVAVEMD 92
Query: 62 ERMVEILN--RRAADSGFHDRLNVISKDALKTEFPQFD----LVVANIPYGISSPLVAKL 115
+R + +L AAD RL ++ DALK + +V+N+PY + +PL+
Sbjct: 93 KRFLPLLEDLSVAADG----RLTIVQGDALKVDMAAVAGGPAHMVSNLPYNVGTPLLINW 148
Query: 116 VYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPK 175
+ G S TL+ QKE A R+ A D + RLAV + V + VMD+ R F P PK
Sbjct: 149 LTGPFRPLSMTLMFQKEVADRIAADVDDDAYGRLAVVSQTVCTAKVVMDLPARAFTPPPK 208
Query: 176 VDSSVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVI 223
V S+VV + P PD + + K A F Q++K++
Sbjct: 209 VASAVVRLVPLTPAPD----------KAMVAALEKVTAAAFGQRRKML 246
>gi|434387825|ref|YP_007098436.1| dimethyladenosine transferase [Chamaesiphon minutus PCC 6605]
gi|428018815|gb|AFY94909.1| dimethyladenosine transferase [Chamaesiphon minutus PCC 6605]
Length = 284
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/240 (36%), Positives = 126/240 (52%), Gaps = 22/240 (9%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQH L N++VLD I+ + I P D +LEIGPGTG LT +L+ + V A+EID +
Sbjct: 5 KQFGQHWLRNEQVLDRIITAAKIAPTDRILEIGPGTGILTRRLVAAASAVVAVEIDRDLS 64
Query: 66 EILNRRAADSGFHDRLNVISKDALK-------TEFPQF---DLVVANIPYGISSPLVAKL 115
+L ++ G D ++ D L T FP+F + VVANIPY I+ P++ KL
Sbjct: 65 ALLVKKM---GHLDNFILLENDFLNLDVDGNLTAFPKFQQANKVVANIPYNITGPILEKL 121
Query: 116 VY-----GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDF 170
+ + F S LL+QKE RL A P F L++ V+ +A E + V RDF
Sbjct: 122 LGNIVHPAERPFDSIVLLVQKEVGDRLFAKPSTKAFGALSIRVQYLAHCELICPVPARDF 181
Query: 171 LPCPKVDSSVVIIRP-KAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ---KKKVIELL 226
P PKVDS+V+ + P + E+ N R FS + K L + ++ ++ELL
Sbjct: 182 SPPPKVDSAVIRLTPRRLELTANNPKLLNNLVRLGFSTRRKMLRNNLQSAIDRESLVELL 241
>gi|281412793|ref|YP_003346872.1| dimethyladenosine transferase [Thermotoga naphthophila RKU-10]
gi|281373896|gb|ADA67458.1| dimethyladenosine transferase [Thermotoga naphthophila RKU-10]
Length = 260
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 130/229 (56%), Gaps = 8/229 (3%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
K GQ L++ R+ IV+ + + P+D V+EIG G G LT +L + +V A EIDE
Sbjct: 14 LKKHLGQVFLSDDRIAKRIVKAADLTPEDVVVEIGAGAGTLTEELAKTGARVIAYEIDES 73
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKT-EFPQFDLVVANIPYGISSPLVAKLVYGTKSF 122
+ IL R + + + + +D LK + P+ + V+NIPY I+ L+ K++ F
Sbjct: 74 LAPILRERLSK---YPNVELRFEDFLKAKDVPEGAICVSNIPYSITGLLMEKII--EWKF 128
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
+ A +++QKE R+LA PG + L+V V+ +V+ + DVS+ F+P P+VDS+VV
Sbjct: 129 KRAIVMVQKEVGERILAKPGKKTYGYLSVVVQTFYEVKKLFDVSRSCFVPNPEVDSTVVD 188
Query: 183 IRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLSKQ 231
++ K D++ ++++ F F+KK KTL K + E + LS++
Sbjct: 189 LKRKP--VDLDFEKFKKFVSMIFAKKRKTLKNNLKPFLSIFEGVDLSRR 235
>gi|240145093|ref|ZP_04743694.1| dimethyladenosine transferase [Roseburia intestinalis L1-82]
gi|257202765|gb|EEV01050.1| dimethyladenosine transferase [Roseburia intestinalis L1-82]
Length = 290
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 125/240 (52%), Gaps = 18/240 (7%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K GQ+ L + VL+ IV + + DD VLEIGPG G +T L E +++V A+EID
Sbjct: 21 FQKKFGQNFLIDPHVLEKIVEAAGVTKDDFVLEIGPGIGTMTQYLCENAREVTAVEIDTN 80
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL---------VVANIPYGISSPLVAK 114
++ IL + +D + VI++D LK + + + VVAN+PY I++P++
Sbjct: 81 LIPILEDTLSA---YDNVTVINQDILKLDIAKLAMERNGGKPIKVVANLPYYITTPIIMG 137
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
L S T+++QKE A R+ PG ++ L++ V+ A E V +V F+P P
Sbjct: 138 LFESHVPIDSITVMVQKEVADRMQVGPGTKDYGALSLAVQFYAKPEIVANVPPNCFMPRP 197
Query: 175 KVDSSVVIIRPKAEIPDVNLDEWRAF--TRTCFSKKNKTLGATFKQKKKVIELLRLSKQK 232
V S+V+ + E+P DE F R F+++ KTL +V LSK++
Sbjct: 198 NVGSAVIRLTRHEEVPVQVDDEKLMFHIIRASFNQRRKTLANGLSNAPQV----HLSKEE 253
>gi|148377319|ref|YP_001256195.1| dimethyladenosine transferase(S-adenosylmethionine-6-N',
N'-adenosyl(rRNA)dimethyltransferase) (16S rRNA
dimethylase) (high levelkasugamycin resistance protein
ksgA) (kasugamycindimethyltransferase) [Mycoplasma
agalactiae PG2]
gi|148291365|emb|CAL58748.1| Dimethyladenosine transferase(S adenosylmethionine 6 N', N'
adenosyl(rRNA) dimethyltransferase) (16S rRNA
dimethylase) (High levelkasugamycin resistance protein
ksgA) (Kasugamycindimethyltransferase) [Mycoplasma
agalactiae PG2]
Length = 270
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 123/216 (56%), Gaps = 8/216 (3%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDD-TVLEIGPGTGNLTLKLLEVSKKVHAIEIDERM 64
K GQ+ L + V+ IV I+P+ ++EIGPGTG LT L+ K+ A EID M
Sbjct: 20 KKFGQNFLHSDSVIKKIV--DIISPEGKQIIEIGPGTGALTKHLVNKCSKLVAFEIDPDM 77
Query: 65 VEILNRRAADSGFHDRLNVISKDALKTEFPQFDL--VVANIPYGISSPLVAKLVYGTKSF 122
+E LN++ + ++ L + D L Q+ VV NIPY I+S ++ KL+ F
Sbjct: 78 IEFLNQQNYFNSENNML--VHDDFLNANLDQYVYFEVVGNIPYYITSEIIFKLIENRFLF 135
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
+ ATLL+QKE A R++A+P E+++L++ + VA V+ + VSK +F P PKVDS++V
Sbjct: 136 KRATLLVQKEVADRIVAAPNSYEYSKLSITCQYVAKVKKELFVSKNNFSPIPKVDSAIVT 195
Query: 183 IRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
D N ++ + F + CFS + K L + KQ
Sbjct: 196 FDFYQNHND-NYEQLKDFFKLCFSARRKKLIWSLKQ 230
>gi|448356621|ref|ZP_21545348.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natrialba chahannaoensis JCM 10990]
gi|445652733|gb|ELZ05616.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natrialba chahannaoensis JCM 10990]
Length = 284
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 119/212 (56%), Gaps = 9/212 (4%)
Query: 7 SKGQHILTNQRVLDSI-VRKSSINPDDT-VLEIGPGTGNLTLKLLE---VSKKVHAIEID 61
++ QH L + RVLD + + I+ D + VLEIG GTG LT +LLE + +E D
Sbjct: 18 NRDQHFLVDDRVLDRLPTYLTDIDADTSHVLEIGGGTGVLTDRLLETIGADDHLSVVERD 77
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
+ E L +D+ RL VI DAL+ + P+F V+N+PYG+SS + +L+
Sbjct: 78 PPLAEFLQEEFSDAIDAGRLTVIEGDALEVDLPEFTSSVSNLPYGVSSQITFRLL---PE 134
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
R L+ Q+EFA R++A PG SE+ RL+V+ + AD E V + K F P P V S+VV
Sbjct: 135 QRPLVLMFQQEFAERMVADPGTSEYGRLSVSTQHYADAELVESIPKEAFSPPPAVQSAVV 194
Query: 182 IIRPKAEIPDV-NLDEWRAFTRTCFSKKNKTL 212
+ P+ DV N + F + F+++ KT+
Sbjct: 195 RLVPREPEYDVENEAFFLRFVKALFTQRRKTI 226
>gi|397688223|ref|YP_006525542.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Pseudomonas
stutzeri DSM 10701]
gi|395809779|gb|AFN79184.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas stutzeri DSM 10701]
Length = 267
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 117/226 (51%), Gaps = 14/226 (6%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ H+++ GQ+ L + V+D I+R P + ++EIGPG G LT LL ++ +E
Sbjct: 4 YQHRARKRFGQNFLHDAGVIDRILRAIHAKPGEQLVEIGPGQGALTEGLLGSGANLNVVE 63
Query: 60 IDERMVEILNRRAADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLVA 113
+D ++ IL + A H+ ++ DALK +F P VV N+PY IS+PL+
Sbjct: 64 LDLDLIPILQGKFAG---HENFSLHQGDALKFDFARLSETPGSLRVVGNLPYNISTPLIF 120
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ + R +LQKE RL A PG ++ RL++ V+ VE + +V F P
Sbjct: 121 HLLDHARLIRDMHFMLQKEVVERLAAQPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPA 180
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P +P D R FS++ KTL T K
Sbjct: 181 PKVDSAIVRLVPHEVLPHPARDHRLLENLVRQAFSQRRKTLRNTLK 226
>gi|374629545|ref|ZP_09701930.1| dimethyladenosine transferase [Methanoplanus limicola DSM 2279]
gi|373907658|gb|EHQ35762.1| dimethyladenosine transferase [Methanoplanus limicola DSM 2279]
Length = 257
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 114/205 (55%), Gaps = 5/205 (2%)
Query: 10 QHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILN 69
QH L + ++ I + ++ + VLEIGPG G LT LL +V A+E+D ++V L
Sbjct: 7 QHFLVDTEAVERISGYADVSGRN-VLEIGPGKGILTESLLRKGARVIAVELDGKLVPYLE 65
Query: 70 RRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLL 129
+R + L ++ DA++ E P FDLVVAN+PY SS + +L+ F A L+
Sbjct: 66 KRFSGEVKSGNLTIVHGDAIRCEIPDFDLVVANLPYSASSKITFRLI--GMGFEEAVLMY 123
Query: 130 QKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAEI 189
QKEFA +++A PG SE RL+V V+ A V ++++ F P PKV S VV + K E+
Sbjct: 124 QKEFAMKMMALPGTSECGRLSVMVQTYAKVMPLLELLPSSFSPKPKVKSYVVRLTLKDEL 183
Query: 190 --PDVNLDEWRAFTRTCFSKKNKTL 212
P N + + R FS + KT+
Sbjct: 184 TYPINNRELYAIIVRELFSHRRKTI 208
>gi|327311782|ref|YP_004338679.1| dimethyladenosine transferase [Thermoproteus uzoniensis 768-20]
gi|326948261|gb|AEA13367.1| dimethyladenosine transferase [Thermoproteus uzoniensis 768-20]
Length = 228
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 116/203 (57%), Gaps = 13/203 (6%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTV-LEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEI 67
GQH+L ++ V + + + + P+ +V LE+G GTG LTL+L + + KV+AIE+D +
Sbjct: 6 GQHMLRDRSVAEYM---AGLVPEGSVVLEVGAGTGTLTLELAKRASKVYAIELDRALAAY 62
Query: 68 LNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATL 127
L+ RA + + VI DAL+ E+P D +NIPY ISSPL+ +L + A +
Sbjct: 63 LSARAPPN-----VEVIVGDALRLEWPPADFFASNIPYYISSPLLLRL---AERRMPAVV 114
Query: 128 LLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKA 187
+LQ+E A R+ A PG + RL V V+ DVE + V R F P P+V S+VV + P+
Sbjct: 115 MLQREVAERISAEPGSENYGRLTVAVRCNYDVEVLRTVPPRAFSPPPQVYSAVVRLTPRP 174
Query: 188 EIPDVNLDEWRAFTRTCFSKKNK 210
D + + FT FS++ K
Sbjct: 175 PCVD-DFKSFEKFTAMLFSQRRK 196
>gi|323342302|ref|ZP_08082534.1| dimethyladenosine transferase [Erysipelothrix rhusiopathiae ATCC
19414]
gi|322463414|gb|EFY08608.1| dimethyladenosine transferase [Erysipelothrix rhusiopathiae ATCC
19414]
Length = 270
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 118/210 (56%), Gaps = 10/210 (4%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQ+ + + V+ +I +S TVLEIGPG G LT +L E KV A EID MV
Sbjct: 23 KHFGQNFIIDPSVVRNIASQSGAG--GTVLEIGPGLGALTQQLAETYDKVIAYEIDPHMV 80
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFD---LVVANIPYGISSPLVAKLVYGTKSF 122
EILN + +D +NVI +D LK + + V AN+PY I++P++ +L+
Sbjct: 81 EILNETLEE---YDNVNVIHQDFLKADLSMYTEPITVCANLPYYITTPILFRLM--ELDI 135
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
+ T+++QKE A RL ASP +++ L++ ++ DV+ V+ VSK F P P V+S V+
Sbjct: 136 VAMTIMVQKEIADRLGASPQTKDYSSLSIQMQYYFDVKTVLKVSKESFHPRPGVESIVIK 195
Query: 183 IRPKAEIPDVNLDEWRAFTRTCFSKKNKTL 212
+ PK + + + F + CF + KTL
Sbjct: 196 LTPKHQTMPYDEKTFFEFVKKCFQFRRKTL 225
>gi|388543070|ref|ZP_10146362.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas sp. M47T1]
gi|388279156|gb|EIK98726.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas sp. M47T1]
Length = 268
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 117/226 (51%), Gaps = 14/226 (6%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ H+++ GQ+ L + V+D I+R + D VLEIGPG G LT LL ++ +E
Sbjct: 5 YQHRARKRFGQNFLHDAGVIDRILRSINAREGDRVLEIGPGQGALTEGLLNSGAQLDVVE 64
Query: 60 IDERMVEILNRRAADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLVA 113
+D+ +V ILN + A G ++ DALK +F P VV N+PY IS+PL+
Sbjct: 65 LDKDLVPILNNQFAGRG---NFSLHQGDALKFDFHTLGAEPGSLRVVGNLPYNISTPLIF 121
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ R +LQKE RL A PG ++ RL++ V+ V + +V F P
Sbjct: 122 HLLSNASLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVVHLFNVGPGAFNPP 181
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P A +P D R F+++ KTL T K
Sbjct: 182 PKVDSAIVRLVPHATLPHPAKDHRLLERVVREAFNQRRKTLRNTLK 227
>gi|298160150|gb|EFI01179.1| Dimethyladenosine transferase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 268
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 115/226 (50%), Gaps = 14/226 (6%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ H+++ GQ+ L + V+D I+R P+D +LEIGPG G LT LL ++ +E
Sbjct: 5 YQHRARKRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTEGLLNSGAQLDVVE 64
Query: 60 IDERMVEILNRRAADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLVA 113
+D+ ++ IL G N+ DALK +F P VV N+PY IS+PL+
Sbjct: 65 LDKDLIPIL---TGQFGNKPNFNLHQGDALKFDFNSLGAEPHSLRVVGNLPYNISTPLIF 121
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ R +LQKE R+ A PG ++ RL++ V+ VE + +V F P
Sbjct: 122 HLLQNASLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPP 181
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P +P D R F+++ KTL T K
Sbjct: 182 PKVDSAIVRLVPYETLPHPAKDHRVLERIVREAFNQRRKTLRNTLK 227
>gi|51473851|ref|YP_067608.1| dimethyladenosine transferase [Rickettsia typhi str. Wilmington]
gi|383752627|ref|YP_005427727.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Rickettsia
typhi str. TH1527]
gi|383843463|ref|YP_005423966.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Rickettsia
typhi str. B9991CWPP]
gi|62900511|sp|Q68W66.1|RSMA_RICTY RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|51460163|gb|AAU04126.1| dimethyladenosine transferase [Rickettsia typhi str. Wilmington]
gi|380759270|gb|AFE54505.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Rickettsia typhi str. TH1527]
gi|380760110|gb|AFE55344.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Rickettsia typhi str. B9991CWPP]
Length = 268
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 120/218 (55%), Gaps = 9/218 (4%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVS-KKVHAIEIDERM 64
K GQ+ + + + D I+R S+I+ + V+EIGPG G LT +L + K + IEIDER
Sbjct: 18 KKHGQNFIFDSSLCDKIIRASNISENSKVIEIGPGVGGLTRSILHKNPKSLTVIEIDERC 77
Query: 65 VEILNRRAADSGFHDRLNVISKDALKTEFPQ--FD--LVVANIPYGISSPLVAKLVYGTK 120
+ +LN G++ LN+I +D LK +D V++N+PY I + LV +L+ K
Sbjct: 78 IPLLNE---IQGYYPNLNIIKQDVLKINLTDLIYDKVTVISNLPYHIGTELVIRLLKEAK 134
Query: 121 SFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSV 180
+ L+LQKE R+ A P + RL+V ++VA VE DV+ F P PKV S++
Sbjct: 135 LITNMILMLQKEVVERICAMPSTKAYGRLSVICQIVAKVEKCFDVAPTAFYPHPKVYSAI 194
Query: 181 VIIRPKAEIPDVNL-DEWRAFTRTCFSKKNKTLGATFK 217
V I P P + L ++ T+ F+ + K + ++ +
Sbjct: 195 VKIIPLENPPSIALINKVEQITKLVFAGRRKMIKSSLR 232
>gi|172037411|ref|YP_001803912.1| dimethyladenosine transferase [Cyanothece sp. ATCC 51142]
gi|354553707|ref|ZP_08973013.1| dimethyladenosine transferase [Cyanothece sp. ATCC 51472]
gi|254807863|sp|B1WRJ7.1|RSMA_CYAA5 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|171698865|gb|ACB51846.1| rRNA dimethyladenosine transferase [Cyanothece sp. ATCC 51142]
gi|353554424|gb|EHC23814.1| dimethyladenosine transferase [Cyanothece sp. ATCC 51472]
Length = 270
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 115/194 (59%), Gaps = 18/194 (9%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
QH L ++ L+ I++ +++ D +LEIGPGTG LT +LL + + + A+E+D + + L
Sbjct: 9 AQHWLRSETALEQIIQAANLKKSDRLLEIGPGTGILTRRLLPLVQSLIAVELDWDLCKKL 68
Query: 69 NRRAADSGFHDRLNVISKDALK-------TEFPQF---DLVVANIPYGISSPLVAKLVYG 118
+ D D ++ D LK +FP+F + VVANIPY I+SP++ KL+
Sbjct: 69 VKSLGD---EDNFLLLQGDILKLDIATEAQQFPKFLPINKVVANIPYNITSPILDKLLGR 125
Query: 119 TKSFRSAT-----LLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
S + + LL+QKE A+R++A PG + L++ ++ +AD ++ DV K+ F P
Sbjct: 126 ISSPKQPSYDLIVLLIQKEVAQRIIAYPGSKNYGALSIKMQYLADCNYICDVPKKSFYPP 185
Query: 174 PKVDSSVVIIRPKA 187
PKVDS+V+ RP++
Sbjct: 186 PKVDSAVITFRPRS 199
>gi|336112704|ref|YP_004567471.1| dimethyladenosine transferase [Bacillus coagulans 2-6]
gi|335366134|gb|AEH52085.1| dimethyladenosine transferase [Bacillus coagulans 2-6]
Length = 295
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 118/223 (52%), Gaps = 19/223 (8%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + +L +I + + + V+E+GPG G LT L SKKV A EID+R
Sbjct: 22 FKKSLGQNFLIDPNILRNITDTADLTQESGVVEVGPGIGALTEHLARSSKKVVAFEIDKR 81
Query: 64 MVEILNRRAADSGFHDRLNVISKDALK--------TEFPQFD--LVVANIPYGISSPLVA 113
+ IL A + +NVI +D LK TEF + +VVAN+PY +++P++
Sbjct: 82 LAPILEDTLAP---YPNINVIYEDVLKADIEKVLETEFAGINDIMVVANLPYYVTTPIIL 138
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
K V G R ++LQKE A R+ A PG + L++ ++ E M V K F+P
Sbjct: 139 KFVTGQYPIRGMVVMLQKEVADRISAVPGTKNYGTLSIAIQYYMTAEVAMIVPKTVFMPQ 198
Query: 174 PKVDSSVVII----RPKAEIPDVNLDEWRAFTRTCFSKKNKTL 212
P VDS+VV + +PK + D + + F+++ KTL
Sbjct: 199 PNVDSAVVKLVKRDKPKVGVTDEAF--FFQVAKASFAQRRKTL 239
>gi|289649007|ref|ZP_06480350.1| dimethyladenosine transferase [Pseudomonas syringae pv. aesculi
str. 2250]
Length = 268
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 116/226 (51%), Gaps = 14/226 (6%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ H+++ GQ+ L + V+D I+R P+D +LEIGPG G LT LL ++ +E
Sbjct: 5 YQHRARKRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTEGLLNSGAQLDVVE 64
Query: 60 IDERMVEILNRRAADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLVA 113
+D+ ++ IL G N+ DALK +F P+ VV N+PY IS+PL+
Sbjct: 65 LDKDLIPIL---TGQFGNKPNFNLHQGDALKFDFNSLGAEPRSLRVVGNLPYNISTPLIF 121
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ R +LQKE R+ A PG ++ RL++ V+ VE + +V F P
Sbjct: 122 HLLQNASLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPP 181
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P +P D R F+++ KTL T K
Sbjct: 182 PKVDSAIVRLVPYETLPHPAKDHRVLERIVREAFNQRRKTLRNTLK 227
>gi|344173719|emb|CCA88892.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Ralstonia syzygii R24]
Length = 281
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 120/230 (52%), Gaps = 15/230 (6%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQ+ L ++ V+ +IV PDD ++EIGPG G LT+ L+E + +E+D +V
Sbjct: 16 KRFGQNFLVDEGVIHAIVAAIDPQPDDVLVEIGPGLGALTVPLMERVPTLQVVELDRDLV 75
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDL------VVANIPYGISSPLVAKLVYGT 119
L RR F D+L V + DAL +F + +V N+PY ISSPL+ L
Sbjct: 76 ARLQRR-----FGDKLIVHAGDALAFDFGALHVPGRSLRIVGNLPYNISSPLLFHLSAFA 130
Query: 120 KSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSS 179
R +LQKE R++A PG F+RL+V +++ +E V+DV F P PKVDS+
Sbjct: 131 DRIRDQHFMLQKEVVDRMVAVPGSKAFSRLSVMLQVRYYMEPVLDVPPGSFNPPPKVDSA 190
Query: 180 VVIIRP----KAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIEL 225
VV + P K+ V++ FS++ K L T ++VI+
Sbjct: 191 VVRMIPWPADKSPYAPVDMRALGTVVALAFSQRRKVLRNTLGSLREVIDF 240
>gi|311028973|ref|ZP_07707063.1| dimethyladenosine transferase [Bacillus sp. m3-13]
Length = 296
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 122/221 (55%), Gaps = 15/221 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + +L +IV ++ +EIGPG G LT ++ + + KV A EID+R
Sbjct: 22 FKKSLGQNFLIDTNILRNIVEYGEVSEKTAAIEIGPGIGALTEQIAKRAGKVFAFEIDQR 81
Query: 64 MVEILNRRAADSGFHDRLNVISKDALK---TEFPQFDL-------VVANIPYGISSPLVA 113
++ IL + +D + VI KD LK TE +L V+AN+PY +++P++
Sbjct: 82 LLPILEDTLSP---YDNVTVIHKDILKADVTELIGEELKAYEEVRVIANLPYYVTTPIIM 138
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
KL+ +S T++LQKE A R+ A PG E+ L++ V+ E VM V K F+P
Sbjct: 139 KLLQEGLPLKSITVMLQKEVAERMAAKPGTKEYGSLSIAVQYFTQAETVMIVPKTVFVPQ 198
Query: 174 PKVDSSVV--IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTL 212
P VDS+V+ ++R + + + D + R F ++ KT+
Sbjct: 199 PNVDSAVIRLVVREEPPVRVKDEDFFFEVVRASFGQRRKTI 239
>gi|407010616|gb|EKE25458.1| dimethyladenosine transferase [uncultured bacterium]
Length = 268
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 123/221 (55%), Gaps = 19/221 (8%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS GQ+ L + +VL+ IV+ +I+PDD V+EIGPG G LT L+E KKV AIE+D+R++
Sbjct: 8 KSLGQNFLKDDQVLEKIVKNGNISPDDVVIEIGPGQGALTELLVEKCKKVIAIELDDRLI 67
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDL---------VVANIPYGISSPLVAKLV 116
+L + + + + +I D LK P+ + V+ANIPY I++P++ L+
Sbjct: 68 PVLQEKFQ---YDENVEIIHDDILKINLPELIVKNELQSGYKVIANIPYYITAPIIRLLL 124
Query: 117 YGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKV 176
L++QKE A R+ A PG + LAV+V+ ++ ++ V + F P PKV
Sbjct: 125 ETKFPPSEIILMVQKEVAERITAKPGS--MSILAVSVQYYSEARYLFTVPRAAFDPVPKV 182
Query: 177 DSSV--VIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTL 212
DS++ ++ + + +E + F R FS K KTL
Sbjct: 183 DSAIIKIVTSNQQSVTSEKKEEVKKFFRIVRAGFSAKRKTL 223
>gi|282848961|ref|ZP_06258350.1| dimethyladenosine transferase [Veillonella parvula ATCC 17745]
gi|282581236|gb|EFB86630.1| dimethyladenosine transferase [Veillonella parvula ATCC 17745]
Length = 284
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 122/226 (53%), Gaps = 16/226 (7%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID 61
I K GQ+ L + ++D IV + + + VLE+GPG G LT L + V AIE+D
Sbjct: 21 IKMSKKLGQNFLIKRGIVDEIVHAAELTAGEPVLEVGPGIGTLTQGLAQSGADVTAIELD 80
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFD-----LVVANIPYGISSPLVAKLV 116
R++E+L+ A +D + +I D LK + P VVAN+PY I++P++ L+
Sbjct: 81 RRLLEVLDTTLAS---YDNVRIIHGDVLKLDVPTIMNHKPFKVVANLPYYITTPIIMSLL 137
Query: 117 YGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKV 176
+++QKE A R++A PG ++ L+V V+ + + V+DV + FLP P V
Sbjct: 138 ESKLPIERLVVMVQKEVALRMIAKPGTKDYGALSVAVQYYTEPDIVLDVPPKSFLPAPAV 197
Query: 177 DSSVV--IIRPKAEIPDVNLDEWRAFTRTC---FSKKNKTLGATFK 217
SSV+ ++R K P V++ + + F R F+++ KT T K
Sbjct: 198 TSSVIRCVLRNK---PPVDVIDEKLFFRVVKAGFAQRRKTFSNTMK 240
>gi|317473695|ref|ZP_07932982.1| dimethyladenosine transferase [Anaerostipes sp. 3_2_56FAA]
gi|316898816|gb|EFV20843.1| dimethyladenosine transferase [Anaerostipes sp. 3_2_56FAA]
Length = 286
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 122/220 (55%), Gaps = 14/220 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K GQ+ L + VL+ I+ ++I DD VLEIGPG G +T L E +++V A+EID
Sbjct: 21 FQKKFGQNFLIDSHVLEKIIDAANITKDDFVLEIGPGIGTMTQYLSEHAREVMAVEIDHN 80
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL---------VVANIPYGISSPLVAK 114
++ IL A +D + V+++D LK + + VVAN+PY I++P++
Sbjct: 81 LIPILKETLAG---YDNVEVLNEDILKVDIGKIAEKKNQGRPIKVVANLPYYITTPIIMG 137
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
L S T+++QKE A+R+ A PG ++ L++ V+ A+ V +V F+P P
Sbjct: 138 LFEKNVPMDSLTVMVQKEVAQRMQAGPGTKDYGALSLAVQFYAEPYIVANVPPNCFMPRP 197
Query: 175 KVDSSVVIIRPKAEIPDVNLDEWRAFT--RTCFSKKNKTL 212
KV S+V+ + ++P +E F+ R F+++ KTL
Sbjct: 198 KVGSAVICLTRYKDMPVKVKNEQLMFSIIRASFNQRRKTL 237
>gi|433445423|ref|ZP_20409830.1| dimethyladenosine transferase [Anoxybacillus flavithermus
TNO-09.006]
gi|432001071|gb|ELK21956.1| dimethyladenosine transferase [Anoxybacillus flavithermus
TNO-09.006]
Length = 295
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 122/222 (54%), Gaps = 17/222 (7%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L VL IV + ++ V+EIGPG G LT +L +KKV A EID+R
Sbjct: 22 FKKSLGQNFLIEPNVLHRIVDFAQLSERTGVIEIGPGIGALTEQLARRAKKVVAFEIDQR 81
Query: 64 MVEILNRRAADS-GFHDRLNVISKDALKT--------EFPQFD--LVVANIPYGISSPLV 112
++ IL AD+ + +++I +D LK +F D +VVAN+PY +++P++
Sbjct: 82 LLPIL----ADTLSPYTNVSIIHEDILKADVQQVIAEQFTDVDDIMVVANLPYYVTTPII 137
Query: 113 AKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
KL+ G R ++LQKE A R+ A PG ++ L + V+ E VM V + F+P
Sbjct: 138 MKLLTGRLPIRGMVVMLQKEVADRMAAKPGTKDYGSLTIAVQYYTHAETVMHVPRTVFVP 197
Query: 173 CPKVDSSVV--IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTL 212
P VDS+V+ + R + + N D + A R F ++ KT+
Sbjct: 198 KPNVDSAVIRLLKREQPAVSVSNEDFFFAVVRASFGQRRKTI 239
>gi|311070689|ref|YP_003975612.1| dimethyladenosine transferase [Bacillus atrophaeus 1942]
gi|419823447|ref|ZP_14346994.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus atrophaeus C89]
gi|310871206|gb|ADP34681.1| dimethyladenosine transferase [Bacillus atrophaeus 1942]
gi|388472420|gb|EIM09196.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus atrophaeus C89]
Length = 292
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 129/240 (53%), Gaps = 22/240 (9%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + +LD IV + + V+EIGPG G LT +L + +K+V A EID+R
Sbjct: 22 FKKSLGQNFLIDTNILDRIVDHAGVTERTGVIEIGPGIGALTEQLAKRAKQVVAFEIDQR 81
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEF-----PQFD-----LVVANIPYGISSPLVA 113
++ IL + +D + VI +D LK + QF +VVAN+PY +++P++
Sbjct: 82 LLPILKDTLSP---YDNVTVIHQDVLKADVRTVIEEQFHDCDEIMVVANLPYYVTTPIIM 138
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
KL+ + ++LQKE A R+ A P E+ L++ V+ + + VM V K F+P
Sbjct: 139 KLLEENLPLKGIVVMLQKEVAERMAADPSSKEYGSLSIAVQFYTEAKTVMTVPKTVFVPQ 198
Query: 174 PKVDSSVV--IIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATF-------KQKKKVIE 224
P VDS+V+ ++R + VN + + F+++ KTL K+KK +IE
Sbjct: 199 PNVDSAVIRLLLREGPAVDVVNEAFFFQLIKASFAQRRKTLLNNLVNNLPQGKEKKSIIE 258
>gi|428311804|ref|YP_007122781.1| dimethyladenosine transferase [Microcoleus sp. PCC 7113]
gi|428253416|gb|AFZ19375.1| dimethyladenosine transferase [Microcoleus sp. PCC 7113]
Length = 297
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 87/240 (36%), Positives = 127/240 (52%), Gaps = 18/240 (7%)
Query: 5 HKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERM 64
K QH L ++ L+ IV + + + +LEIGPGTG LT +LL ++ V A+EID +
Sbjct: 23 RKQFAQHWLRSEAALNQIVAAAQLQKSERILEIGPGTGILTRRLLPQAESVVAVEIDRDL 82
Query: 65 VEILNR--RAADSGF--HDRLNVISKDALKTEFPQF---DLVVANIPYGISSPLVAKLVY 117
++L + R+ D+ + DA FP F + VVANIPY I+ P++ KL+
Sbjct: 83 CKLLVQKLRSFDNFLLLQGDFLTLDIDAQLASFPAFQNPNKVVANIPYNITGPILEKLL- 141
Query: 118 GTKSFRSA------TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFL 171
GT S +A LL+QKE A RL A P F L+V V+ +A+ E + +V + F
Sbjct: 142 GTISQPAADPFDLIVLLVQKEVAERLYAKPSSRAFGALSVRVQYLAECELICEVPAKAFS 201
Query: 172 PCPKVDSSVVIIRPKAEIPDVNLDEW-RAFTRTCFSKKNKTLGATFKQKKKVIELLRLSK 230
P PKVDS+VV +RP+ P +W + FS K K L K V+E RL++
Sbjct: 202 PPPKVDSAVVRLRPRRVEPQATEPKWLETLLKLGFSSKRKMLRNNL---KSVVECDRLTQ 258
>gi|348590602|ref|YP_004875064.1| Dimethyladenosine transferase [Taylorella asinigenitalis MCE3]
gi|347974506|gb|AEP37041.1| Dimethyladenosine transferase [Taylorella asinigenitalis MCE3]
Length = 254
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 125/236 (52%), Gaps = 17/236 (7%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQH LT+Q V + IVRK SI+PDD ++EIGPG LT LL+ ++ IEID +
Sbjct: 7 KRFGQHFLTDQSVPEEIVRKLSIHPDDHIVEIGPGLSALTDVLLKELNHLYVIEIDRDLA 66
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDL---VVANIPYGISSPLVAKLVYGTKSF 122
+ L R D+ D L V+ D L +F F +V N+PY ISSP++ L+
Sbjct: 67 QRL-RSNYDA---DNLTVVESDVLDVDFSVFPTPLRIVGNLPYNISSPILFHLMQFASGV 122
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
+LQKE R++A PG S++ RL+V ++ + +MDV + F P PKVDS+VV
Sbjct: 123 IDQHFMLQKEVVDRMVAIPGTSDYGRLSVMLQERYKMYSIMDVPPKAFSPPPKVDSAVVR 182
Query: 183 IRPKAEIPDVNLDEWRAF------TRTCFSKKNKTLGATFKQKKKVIELLRLSKQK 232
+ P D++ D+ +++ FS++ K L K + + L + K
Sbjct: 183 MIPL----DISRDKPKSYKTFSDLVLQAFSQRRKMLRGVLKSYEIDWDFLNIDPTK 234
>gi|119871918|ref|YP_929925.1| dimethyladenosine transferase [Pyrobaculum islandicum DSM 4184]
gi|226732612|sp|A1RRK0.1|RSMA_PYRIL RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|119673326|gb|ABL87582.1| dimethyladenosine transferase [Pyrobaculum islandicum DSM 4184]
Length = 235
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 113/204 (55%), Gaps = 11/204 (5%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
QH L + V I D ++E+GPG G LTL L E SK ++AIEID + E L
Sbjct: 7 SQHFLRDTSVAQFITELVPSGLD--IIEVGPGRGALTLPLAEKSKTIYAIEIDPTLAEFL 64
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLL 128
R+A + + VI DAL+ E+P+ D V+NIPY I+SPL+ KL K A +
Sbjct: 65 KRQAPPN-----VVVIVGDALEIEWPRADFFVSNIPYSITSPLLLKL---AKYRLPAVVT 116
Query: 129 LQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAE 188
+QKE A RL+A+PG + RL V ++ DVE + + F P PKV S+VV + P+
Sbjct: 117 IQKEVAERLVAAPGTENYGRLTVAIRCHYDVEVLRILPPHVFSPPPKVYSAVVRLTPRRP 176
Query: 189 IPDVNLDEWRAFTRTCFSKKNKTL 212
+ + + ++ FT FS + KTL
Sbjct: 177 CVE-DFENFQRFTARLFSTRRKTL 199
>gi|374711291|ref|ZP_09715725.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Sporolactobacillus inulinus CASD]
Length = 291
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/221 (35%), Positives = 124/221 (56%), Gaps = 15/221 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
KS GQ+ L ++ +L++I +SI+ + VLEIGPG G LT L +KKV A+EID R
Sbjct: 22 LKKSLGQNFLIDENILNNIATSASIDENSYVLEIGPGAGALTQVLAGRAKKVIAVEIDRR 81
Query: 64 MVEILNRRAADSG-----FHDRLNVISKDALKTEFPQFD--LVVANIPYGISSPLVAKLV 116
+ +L D F D L + L E P VVAN+PY +++P++ KL+
Sbjct: 82 LEAVLADTLQDFDNVSIHFGDVLELDVAQILAQECPPGTSVTVVANLPYYVTTPILMKLL 141
Query: 117 YGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKV 176
G ++ +++QKE A RL A PG+ + L++ V+ +A+ + VM V K F+P P V
Sbjct: 142 TGGLPIKTIVVMIQKEVASRLQADPGEKSYGSLSIAVQYLAEAKIVMTVPKTVFVPQPNV 201
Query: 177 DSSVVI--IRPKAEIPDVNLDEWRAF---TRTCFSKKNKTL 212
DS+V+ +RP+ +I +D+ F R F+++ KTL
Sbjct: 202 DSAVIRLDVRPQKKI---RVDDEAFFFKVVRASFAQRRKTL 239
>gi|218962077|ref|YP_001741852.1| Dimethyladenosine transferase (S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase) (16S rRNA
dimethylase) (High level kasugamycin resistance protein
ksgA) (Kasugamycin dimethyltransferase) [Candidatus
Cloacamonas acidaminovorans]
gi|167730734|emb|CAO81646.1| Dimethyladenosine transferase (S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase) (16S rRNA
dimethylase) (High level kasugamycin resistance protein
ksgA) (Kasugamycin dimethyltransferase) [Candidatus
Cloacamonas acidaminovorans str. Evry]
Length = 267
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 130/235 (55%), Gaps = 16/235 (6%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K+ GQ+ LT++ + + IV + P+D+V EIGPGTG LT ++++ + ++ A E+D R+
Sbjct: 12 KALGQNFLTDKSIAEKIVALGELQPEDSVWEIGPGTGILTDEIIKNNVQLRAFELDRRLY 71
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDL-------VVANIPYGISSPLVAKLVYG 118
+ L+ R + +R+ + D L+ ++ ++ANIPY I+SPL+A L
Sbjct: 72 KYLSAR-----YENRIILEQTDILQVDWNSLIRKDGTPLKLIANIPYQITSPLLALLEEY 126
Query: 119 TKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDS 178
++ F L++QKE A RL A PG+ + L + ++LV D+ + VS+ F P PKVDS
Sbjct: 127 SRFFSRIVLMVQKEVAERLSAKPGNKNYAPLTIRLRLVFDISSKIQVSREKFSPMPKVDS 186
Query: 179 SVVIIRPKAEIPDVNLDE-WRAFTRTCFSKKNKTLGATF---KQKKKVIELLRLS 229
+V+++ P+ P + E + F + KTL K+K EL +LS
Sbjct: 187 AVILLLPRENKPVIKHPEHFHKLLHAAFVHRRKTLANNLIPVLGKEKTEELAKLS 241
>gi|242556505|pdb|3FYD|A Chain A, Crystal Structure Of Dim1 From The Thermophilic Archeon,
Methanocaldococcus Jannaschi
Length = 263
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 119/206 (57%), Gaps = 8/206 (3%)
Query: 10 QHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILN 69
Q L ++ ++ V +++ DD VLEIG G G LT +L + +KKV+ IEID+ + N
Sbjct: 1 QCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYAN 60
Query: 70 RRAADSGFHDRLNVISKDALKTEFPQFDL--VVANIPYGISSPLVAKLVYGTKSFRSATL 127
+ ++ + +I DALK + + D VVAN+PY ISSP+ KL+ + F A L
Sbjct: 61 KLKE---LYNNIEIIWGDALKVDLNKLDFNKVVANLPYQISSPITFKLI--KRGFDLAVL 115
Query: 128 LLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP-K 186
+ Q EFA+R++A+ G ++ RL+V V+ ADVE V V F P PKV S++V I+P K
Sbjct: 116 MYQYEFAKRMVAAAGTKDYGRLSVAVQSRADVEIVAKVPPSAFYPKPKVYSAIVKIKPNK 175
Query: 187 AEIPDVNLDEWRAFTRTCFSKKNKTL 212
+ N + + F R F +NK++
Sbjct: 176 GKYHIENENFFDDFLRAIFQHRNKSV 201
>gi|302383692|ref|YP_003819515.1| dimethyladenosine transferase [Brevundimonas subvibrioides ATCC
15264]
gi|302194320|gb|ADL01892.1| dimethyladenosine transferase [Brevundimonas subvibrioides ATCC
15264]
Length = 270
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 116/221 (52%), Gaps = 13/221 (5%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV-SKKVHAIEIDERM 64
KS GQH L + + IVR + V+E+GPG G LT ++E + V +E D R
Sbjct: 20 KSFGQHFLLDLNITRKIVRLAGPFEGRAVIEVGPGPGGLTRAIVESDAGPVVLVEKDPRF 79
Query: 65 VEILNRRAADSGFHDRLNVISKDALKTEFPQFDLV------VANIPYGISSPLVAKLVYG 118
+ +LN G RL +I DALK + DLV V+N+PY + +PL+ K + G
Sbjct: 80 LPLLNELDTGDG---RLRIIEADALKVV--EADLVAGPAHVVSNLPYNVGTPLLIKWLTG 134
Query: 119 TKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDS 178
+ TL+ QKE A R++A+PGD + RLAV + VA+ VM + F P PKV S
Sbjct: 135 PWIPHAMTLMFQKEVAERIVAAPGDDAYGRLAVIAQAVAEARIVMHLPAAAFTPPPKVAS 194
Query: 179 SVVIIRPKAEIPDVN-LDEWRAFTRTCFSKKNKTLGATFKQ 218
+VV + P A+ PD L T F ++ K L ++ KQ
Sbjct: 195 AVVHLVPHADRPDREMLKRLETVTAAAFGQRRKMLRSSLKQ 235
>gi|448414166|ref|ZP_21577305.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halosarcina pallida JCM 14848]
gi|445682459|gb|ELZ34876.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halosarcina pallida JCM 14848]
Length = 289
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 115/210 (54%), Gaps = 9/210 (4%)
Query: 7 SKGQHILTNQRVLDSIVRKSSINPDDT-VLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
++ QH L + RVL I + D + VLE+G GTG LT +LL ++ +V +E D R+
Sbjct: 33 NQDQHFLVDDRVLARIPEYLPEDADTSHVLEVGGGTGALTDRLLRIADRVTVVERDSRLA 92
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSA 125
L A + RL V+ DAL+ + P+F V+N+PYGISS + +L+
Sbjct: 93 AFLREEFAAEVENGRLTVLEGDALELDLPEFTACVSNLPYGISSEITFRLLPRGVPL--- 149
Query: 126 TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP 185
L+ QKEF R+ A G SE+ RL+V+ + DVE V V K F P P V+S VV + P
Sbjct: 150 VLMFQKEFGERMAAESGTSEYGRLSVSAQHYGDVEVVETVPKGAFSPAPAVESVVVRVTP 209
Query: 186 KAEIPDVNLDE---WRAFTRTCFSKKNKTL 212
+ PD +D+ + F + F+++ KT+
Sbjct: 210 RD--PDYEVDDESFFLDFVKALFTQRRKTI 237
>gi|71735918|ref|YP_272932.1| dimethyladenosine transferase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|257483106|ref|ZP_05637147.1| dimethyladenosine transferase [Pseudomonas syringae pv. tabaci str.
ATCC 11528]
gi|416014380|ref|ZP_11562207.1| dimethyladenosine transferase [Pseudomonas syringae pv. glycinea
str. B076]
gi|416021882|ref|ZP_11567173.1| dimethyladenosine transferase [Pseudomonas syringae pv. glycinea
str. race 4]
gi|422406489|ref|ZP_16483517.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. glycinea str. race 4]
gi|422595492|ref|ZP_16669779.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. lachrymans str. M301315]
gi|422682321|ref|ZP_16740587.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|118600884|sp|Q48NT7.1|RSMA_PSE14 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|71556471|gb|AAZ35682.1| dimethyladenosine transferase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320326009|gb|EFW82067.1| dimethyladenosine transferase [Pseudomonas syringae pv. glycinea
str. B076]
gi|320332056|gb|EFW87992.1| dimethyladenosine transferase [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330881716|gb|EGH15865.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. glycinea str. race 4]
gi|330985796|gb|EGH83899.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. lachrymans str. M301315]
gi|331011661|gb|EGH91717.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. tabaci str. ATCC 11528]
Length = 268
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 116/226 (51%), Gaps = 14/226 (6%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ H+++ GQ+ L + V+D I+R P+D +LEIGPG G LT LL ++ +E
Sbjct: 5 YQHRARKRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTEGLLNSGAQLDVVE 64
Query: 60 IDERMVEILNRRAADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLVA 113
+D+ ++ IL G N+ DALK +F P+ VV N+PY IS+PL+
Sbjct: 65 LDKDLIPIL---TGQFGNKPNFNLHQGDALKFDFNSLGAEPRSLRVVGNLPYNISTPLIF 121
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ R +LQKE R+ A PG ++ RL++ V+ VE + +V F P
Sbjct: 122 HLLQNASLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPP 181
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P +P D R F+++ KTL T K
Sbjct: 182 PKVDSAIVRLVPYETLPHPAKDHRVLERVVREAFNQRRKTLRNTLK 227
>gi|270290912|ref|ZP_06197136.1| dimethyladenosine transferase [Pediococcus acidilactici 7_4]
gi|304386409|ref|ZP_07368742.1| dimethyladenosine transferase [Pediococcus acidilactici DSM 20284]
gi|418068507|ref|ZP_12705789.1| dimethyladenosine transferase [Pediococcus acidilactici MA18/5M]
gi|427441756|ref|ZP_18925413.1| dimethyladenosine transferase [Pediococcus lolii NGRI 0510Q]
gi|270280972|gb|EFA26806.1| dimethyladenosine transferase [Pediococcus acidilactici 7_4]
gi|304327766|gb|EFL94993.1| dimethyladenosine transferase [Pediococcus acidilactici DSM 20284]
gi|357539243|gb|EHJ23262.1| dimethyladenosine transferase [Pediococcus acidilactici MA18/5M]
gi|425786945|dbj|GAC46201.1| dimethyladenosine transferase [Pediococcus lolii NGRI 0510Q]
Length = 297
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 123/220 (55%), Gaps = 17/220 (7%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
KS GQ+ LT+ VL +IV + IN D V+E+GPG G+LT ++ + + +V A EID+ ++
Sbjct: 26 KSLGQNFLTDPNVLVNIVDAAEINDGDDVIEVGPGIGSLTEQIAKRAHQVLAFEIDQNLI 85
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQ-----FD-----LVVANIPYGISSPLVAKL 115
+L+ A +D + +I++D LK + FD +VAN+PY I++P++
Sbjct: 86 PVLDETLAP---YDNITIINEDVLKVNVNEVVAEHFDGQHPIKLVANLPYYITTPILKSF 142
Query: 116 VYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPK 175
+ + +++QKE A RL A PGD E+ L+V V+ + V R F+P PK
Sbjct: 143 MASSLPIAKMVVMMQKEVADRLTAQPGDKEYGSLSVVVQYRMQTQVEFTVPARVFVPQPK 202
Query: 176 VDSSVVIIRPKAEIPDVNLDEWRAFTRT---CFSKKNKTL 212
VDS++V + P+ + P D+ R F +T CF + K L
Sbjct: 203 VDSAIVSLTPRKDWPVYPADD-RDFFKTVHGCFMHRRKNL 241
>gi|443328640|ref|ZP_21057235.1| dimethyladenosine transferase [Xenococcus sp. PCC 7305]
gi|442791771|gb|ELS01263.1| dimethyladenosine transferase [Xenococcus sp. PCC 7305]
Length = 282
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 117/225 (52%), Gaps = 19/225 (8%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQH L + RVLD I + +N D +LEIGPGTG LT +LL V A+EID+ + + L
Sbjct: 14 GQHWLQSDRVLDQIANAAELNSSDRILEIGPGTGVLTRRLLGSVDSVLAVEIDKYLCKKL 73
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQ----FDL------VVANIPYGISSPLVAKLVY- 117
++ + + ++ D L + P+ F L +VANIPY I+ ++ KL+
Sbjct: 74 TKKFQE---YQNFLLLQGDFLALDIPELVKPFPLFQKQTKIVANIPYNITGLILEKLLGS 130
Query: 118 ----GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
TK + S LL+QKE RL A+P E+ L+V ++ +A E + DV + F P
Sbjct: 131 ISQPNTKDYESIVLLIQKEVGDRLTANPSTKEYGALSVRIQYLASCEKICDVPAKAFYPP 190
Query: 174 PKVDSSVVIIRPKA-EIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
PKVDS VV +RP P N+ + + FS + K L K
Sbjct: 191 PKVDSVVVRLRPHTLSNPAENVRQLETLVKLGFSSRRKMLRNNLK 235
>gi|422607556|ref|ZP_16679554.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. mori str. 301020]
gi|330891196|gb|EGH23857.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. mori str. 301020]
Length = 268
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 116/226 (51%), Gaps = 14/226 (6%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ H+++ GQ+ L + V+D I+R P+D +LEIGPG G LT LL ++ +E
Sbjct: 5 YQHRARKRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTEGLLNSGAQLDVVE 64
Query: 60 IDERMVEILNRRAADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLVA 113
+D+ ++ IL G N+ DALK +F P+ VV N+PY IS+PL+
Sbjct: 65 LDKDLIPIL---TGQFGNKPNFNLHQGDALKFDFNSLGAEPRSLRVVGNLPYNISTPLIF 121
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ R +LQKE R+ A PG ++ RL++ V+ VE + +V F P
Sbjct: 122 HLLQNASLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPP 181
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P +P D R F+++ KTL T K
Sbjct: 182 PKVDSAIVRLVPYETLPHPAKDHRVLERVVREAFNQRRKTLRNTLK 227
>gi|227891849|ref|ZP_04009654.1| dimethyladenosine transferase [Lactobacillus salivarius ATCC 11741]
gi|227866312|gb|EEJ73733.1| dimethyladenosine transferase [Lactobacillus salivarius ATCC 11741]
Length = 296
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 136/247 (55%), Gaps = 25/247 (10%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ LT+ +L +IV + ++ +D V+EIGPG G LT +L + + KV A+EID+R
Sbjct: 25 FKKSLGQNFLTDINILKNIVAAAEVSEEDNVIEIGPGIGALTEQLAKRANKVMALEIDDR 84
Query: 64 MVEILNRRAADS-GFHDRLNVISKDALKTEF---------PQFDL-VVANIPYGISSPLV 112
++ +L AD+ ++ + VI +D LK + P L +VAN+PY I++P++
Sbjct: 85 LLPVL----ADTLSPYENVEVIHQDILKADLEALIAEHFEPGHKLKLVANLPYYITTPIL 140
Query: 113 AKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLP 172
L+ F + +++QKE A RL A+PG + L+V V+ D E V K F+P
Sbjct: 141 MHLLDSGIEFETIVVMMQKEVAERLAANPGTKAYGSLSVAVQYEMDSEIAFIVPKTVFVP 200
Query: 173 CPKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTL--------GATFKQKKKV 222
P VDS+++++ K P DE ++ + F + K+L G + K+K+
Sbjct: 201 QPNVDSAIIVLNKKKVKPKEPQDEKHFKKLVKGSFMHRRKSLWNNLQSLYGKDSETKEKM 260
Query: 223 IELLRLS 229
++ L ++
Sbjct: 261 LQALEVA 267
>gi|392423498|ref|YP_006464492.1| dimethyladenosine transferase [Desulfosporosinus acidiphilus SJ4]
gi|391353461|gb|AFM39160.1| dimethyladenosine transferase [Desulfosporosinus acidiphilus SJ4]
Length = 275
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 119/216 (55%), Gaps = 12/216 (5%)
Query: 5 HKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERM 64
HKS GQ L + RV++ IV S++NPD ++EIGPG G LT L +K+ A+E+D
Sbjct: 19 HKSLGQVFLISDRVIEGIVTASTLNPDIPLVEIGPGLGVLTRVLASNMEKMWAVELDSHK 78
Query: 65 VEILNRRAADSGFHDRLNVISKDALKTEFPQF-----DLVVANIPYGISSPLVAKLVYGT 119
++ L + GF ++ I +DAL+ + +V N+PY I+SPL+ +
Sbjct: 79 IDTLKKEL--QGFS--IDFIHQDALELNLRELWGDRKGYLVGNLPYYITSPLIMHFLDQE 134
Query: 120 KSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSS 179
T+++QKE A R+ A PG + L+V V++ A V VMDV DF P PKV SS
Sbjct: 135 DVLSGMTIMVQKEVADRIAARPGSKAYGVLSVAVQISAQVTKVMDVMPSDFWPQPKVTSS 194
Query: 180 VVIIRPKAEIPDVNLDEWRAF--TRTCFSKKNKTLG 213
V+ + ++ P + D+ F + FS++ KTLG
Sbjct: 195 VLRLDLRS-YPGFDADKKSFFRVVKAAFSQRRKTLG 229
>gi|269468227|gb|EEZ79917.1| dimethyladenosine transferase, rRNA methylation [uncultured SUP05
cluster bacterium]
Length = 254
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 119/214 (55%), Gaps = 12/214 (5%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
GQ+ LT+ R++D I+ + +D +LEIGPG G +TL LLE ++H IEID ++ +L
Sbjct: 13 GQNFLTDARIVDRIIATIAPKKNDNLLEIGPGKGAMTLPLLEELNQLHVIEIDTDLIALL 72
Query: 69 NRRAADSGFHDRLNVISKDALK---TEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSA 125
S + L + DALK ++ P VV N+PY ISSP++ L+ + +
Sbjct: 73 Q-----SFGKENLIIHQGDALKFDVSKLPAPLRVVGNLPYNISSPILFHLLNNREYIQDM 127
Query: 126 TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP 185
+LQKE R++AS G+ + RL+V ++ +VE + V F P PKVDS++V ++P
Sbjct: 128 IFMLQKEVVERMVASNGNKTYGRLSVMIQAFFEVEMIFVVPPESFEPAPKVDSAIVYLKP 187
Query: 186 --KAEIPDVNLDEWRAFTRTCFSKKNKTLGATFK 217
K I D+ + + + F+++ KTL K
Sbjct: 188 LEKNLIDDITV--FEKIVKASFAQRRKTLRNCLK 219
>gi|17545237|ref|NP_518639.1| dimethyladenosine transferase [Ralstonia solanacearum GMI1000]
gi|27151581|sp|Q8Y219.1|RSMA_RALSO RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|17427528|emb|CAD14046.1| probable dimethyladenosine transferase
(s-adenosylmethionine-6-n',n'-adenosyl(rrna)
dimethyltransferase) (16s rrna dimethylase) (high level
kasugamycin resistance protein ksga) (kasugamycin
dimethyltransferase) [Ralstonia solanacearum GMI1000]
Length = 281
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 120/230 (52%), Gaps = 15/230 (6%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQ+ L + V+ +IV PDD ++EIGPG G LT+ L+E + +E+D +V
Sbjct: 16 KRFGQNFLVDDGVIHAIVAAIDPQPDDVLVEIGPGLGALTVPLMERVPTLQVVELDRDLV 75
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFDL------VVANIPYGISSPLVAKLVYGT 119
L RR F D+L V + DAL +F + +V N+PY ISSPL+ L
Sbjct: 76 ARLQRR-----FGDKLIVHAGDALAFDFGTLHVPGRSLRIVGNLPYNISSPLLFHLSAFA 130
Query: 120 KSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSS 179
R +LQKE R++A+PG F+RL+V +++ +E V++V F P PKVDS+
Sbjct: 131 DRVRDQHFMLQKEVVDRMVAAPGSKAFSRLSVMLQVRYYMELVLEVPPGSFNPPPKVDSA 190
Query: 180 VVIIRP----KAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIEL 225
VV + P K+ V++ FS++ K L T ++VI+
Sbjct: 191 VVRMIPWPADKSPYAPVDMRALGTVVTLAFSQRRKVLRNTLGSLREVIDF 240
>gi|336066895|ref|YP_004561753.1| dimethyladenosine transferase [Erysipelothrix rhusiopathiae str.
Fujisawa]
gi|334296841|dbj|BAK32712.1| dimethyladenosine transferase [Erysipelothrix rhusiopathiae str.
Fujisawa]
Length = 270
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 117/210 (55%), Gaps = 10/210 (4%)
Query: 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMV 65
K GQ+ + + V+ +I S TVLEIGPG G LT +L E KV A EID MV
Sbjct: 23 KHFGQNFIIDPSVVRNIASHSGAG--GTVLEIGPGLGALTQQLAETYDKVIAYEIDPHMV 80
Query: 66 EILNRRAADSGFHDRLNVISKDALKTEFPQFD---LVVANIPYGISSPLVAKLVYGTKSF 122
EILN + +D +NVI +D LK + + V AN+PY I++P++ +L+
Sbjct: 81 EILNETLEE---YDNVNVIHQDFLKADLSMYTEPITVCANLPYYITTPILFRLM--ELDI 135
Query: 123 RSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVI 182
+ T+++QKE A RL ASP +++ L++ ++ DV+ V+ VSK F P P V+S V+
Sbjct: 136 VAMTIMVQKEIADRLGASPQTKDYSSLSIQMQYYFDVKTVLKVSKESFHPRPGVESIVIK 195
Query: 183 IRPKAEIPDVNLDEWRAFTRTCFSKKNKTL 212
+ PK + + + F + CF + KTL
Sbjct: 196 LTPKHQTMPYDEKTFFEFVKKCFQFRRKTL 225
>gi|225374814|ref|ZP_03752035.1| hypothetical protein ROSEINA2194_00434 [Roseburia inulinivorans DSM
16841]
gi|225213383|gb|EEG95737.1| hypothetical protein ROSEINA2194_00434 [Roseburia inulinivorans DSM
16841]
Length = 288
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 119/222 (53%), Gaps = 16/222 (7%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K GQ+ L + VL+ I+ +S I DD VLEIGPG G +T L E +++V A+EID+
Sbjct: 21 FQKKFGQNFLIDTHVLEKIIEESGITKDDFVLEIGPGIGTMTQYLCENAREVAAVEIDKN 80
Query: 64 MVEILNRRAADS-GFHDRLNVISKDALKTEFPQFDL---------VVANIPYGISSPLVA 113
++ IL AD+ +D + VI+ D LK + + VVAN+PY I++P++
Sbjct: 81 LIPIL----ADTLSAYDNVEVINDDILKVDINKLAEEKNGGKPIKVVANLPYYITTPIIM 136
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L S T+++QKE A R+ PG E+ L++ V+ A E V V F+P
Sbjct: 137 GLFESHVPIDSITIMVQKEVADRMQVGPGTKEYGALSLAVQYYAKPEIVAIVPPNCFMPR 196
Query: 174 PKVDSSVVIIRPKAEIPDVNLDEWRAF--TRTCFSKKNKTLG 213
P V S+V+ + E+P DE F R F+++ KTL
Sbjct: 197 PNVGSAVIRLTRHKEVPVQVNDEKLMFKIIRASFNQRRKTLA 238
>gi|452972522|gb|EME72352.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus sonorensis L12]
Length = 292
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/241 (34%), Positives = 130/241 (53%), Gaps = 24/241 (9%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + +LD IV + + V+EIGPG G LT +L + +KKV A EID+R
Sbjct: 22 FKKSLGQNFLIDTNILDRIVDHAEVTERTGVIEIGPGIGALTEQLAKRAKKVVAFEIDQR 81
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEF-----PQFD-----LVVANIPYGISSPLVA 113
++ IL + +D + VI +D LK + QF +VVAN+PY +++P++
Sbjct: 82 LLPILEDTLSP---YDNVTVIHQDVLKADIKAVMDEQFQGCDEVMVVANLPYYVTTPIIM 138
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
KL+ + ++LQKE A R+ A P E+ L++ V+ + + VM V K F+P
Sbjct: 139 KLLEEHLPLKGIVVMLQKEVADRMAAKPSSKEYGSLSIAVQFYTEAKTVMVVPKTVFVPQ 198
Query: 174 PKVDSSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKT-------LGATFKQKKKVI 223
P VDS+V+ + + E P V + + F + F+++ KT AT K+KK I
Sbjct: 199 PNVDSAVIRLTLR-EAPAVTVKDEAFFFQVVKASFAQRRKTLLNNLVNNLATGKEKKAEI 257
Query: 224 E 224
E
Sbjct: 258 E 258
>gi|374723867|gb|EHR75947.1| 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase
[uncultured marine group II euryarchaeote]
Length = 291
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 112/226 (49%), Gaps = 7/226 (3%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQH L N ++ V + +D VLE+GPG G LT LLEV +V AIEID
Sbjct: 17 FDKSLGQHFLVNDELIQRAVELGEVTENDHVLEVGPGPGVLTEALLEVGCRVTAIEIDPV 76
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQ-FDLVVANIPYGISSPLVAKLVY----- 117
E L A ++L +I DAL ++P D +VANIPY ISSPL+ L
Sbjct: 77 AAEHLRGAFAPEINSEQLVLIEGDALVAQWPNDIDKMVANIPYQISSPLIEHLTRYLRNP 136
Query: 118 GTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVD 177
T + S LL+Q+EFA RL+ +S+ L + L D E V +F P PKV+
Sbjct: 137 RTSAIESVVLLVQEEFAERLVME-YESDVGSLGMTAALDWDCEIEDKVGPHNFSPNPKVN 195
Query: 178 SSVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVI 223
S V + E ++ R CF ++ K L T K+ + I
Sbjct: 196 SRYVTLEAHHEAWPCDVRLVRQMIHQCFGERRKKLRTTLKRSPRRI 241
>gi|238922667|ref|YP_002936180.1| dimethyladenosine transferase [Eubacterium rectale ATCC 33656]
gi|238874339|gb|ACR74046.1| dimethyladenosine transferase [Eubacterium rectale ATCC 33656]
Length = 288
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 133/245 (54%), Gaps = 26/245 (10%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K GQ+ L + +L+ I+ + I DD +LEIGPG G +T L E +++V A+EID
Sbjct: 21 FQKKFGQNFLIDTGILEEIIDSAGITKDDMILEIGPGIGTMTQYLCESARQVIAVEIDTN 80
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL---------VVANIPYGISSPLVAK 114
++ IL ++ +D + VI+ D LK + VVAN+PY I++P++
Sbjct: 81 LIPILKDTLSE---YDNVKVINDDILKVDINALAEEYNNGKPIKVVANLPYYITTPIIMG 137
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
L S T+++QKE A R+ A+PG ++ L++ V+ + E V++V F+P P
Sbjct: 138 LFESHVPIDSITIMVQKEVADRMQAAPGKKDYGALSLAVQYYSHPEIVVNVPPSCFMPQP 197
Query: 175 KVDSSVVIIRPKAEIPDVNLDEWRAF---TRTCFSKKNKTL----------GATFKQKKK 221
KV SSV+ ++ + E P V++++ + R F+++ KTL G T +Q ++
Sbjct: 198 KVGSSVISLK-RYEKPVVDVEDEKLMFKIIRASFNQRRKTLANGLNNFGGMGLTKEQIQQ 256
Query: 222 VIELL 226
IE L
Sbjct: 257 SIEAL 261
>gi|404398415|ref|ZP_10989999.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas fuscovaginae UPB0736]
Length = 272
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 117/226 (51%), Gaps = 14/226 (6%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ H+++ GQ+ L + V+D I+R +D +LEIGPG G LT LL ++ +E
Sbjct: 5 YQHRARKRFGQNFLHDAGVIDRILRAIRAKSEDRMLEIGPGQGALTEGLLSSGAQLDVVE 64
Query: 60 IDERMVEILNRRAADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLVA 113
+D+ +V ILN++ A + DALK +F P VV N+PY IS+PL+
Sbjct: 65 LDKDLVPILNQQFASK---PNFQLHQGDALKFDFTTLNAAPNSLRVVGNLPYNISTPLIF 121
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ R +LQKE RL A PG ++ RL++ V+ VE + +V F P
Sbjct: 122 HLLNNANLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPP 181
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P A +P D R F+++ KTL T K
Sbjct: 182 PKVDSAIVRLVPHAVLPHPAKDHRLLERVVREAFNQRRKTLRNTLK 227
>gi|333373013|ref|ZP_08464932.1| dimethyladenosine transferase [Desmospora sp. 8437]
gi|332971060|gb|EGK10030.1| dimethyladenosine transferase [Desmospora sp. 8437]
Length = 294
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 128/240 (53%), Gaps = 25/240 (10%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
KS GQH LT++R+LD ++ + + P+ VLEIGPG G LT +L + +V A+E+DER
Sbjct: 24 LKKSLGQHFLTDRRILDKMMEAAGLGPEAGVLEIGPGIGALTERLAVEAGQVVAVELDER 83
Query: 64 MVEILNRRAADSGFHDR--LNVISKDALKTEFPQF------DL----VVANIPYGISSPL 111
++ +L+ S F D+ + ++ D + + + D VVAN+PY +++P+
Sbjct: 84 LIPVLS-----SLFSDQPHVRIVQGDVMSLDLSRLLQDHLGDCSRISVVANLPYYVTTPI 138
Query: 112 VAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFL 171
+ +L+ +++QKE A RL ASPG + + V + A+ E+V V F+
Sbjct: 139 LMRLLEEKLPLDRIVIMIQKEVAERLTASPGSKAYGSITVATRYYAETEWVTKVPAHVFV 198
Query: 172 PCPKVDSSVVIIRPKAEIPDVNLDEWRAF--TRTCFSKKNKTL------GATFKQKKKVI 223
P P+VDS+V+ ++ + P DE F R F ++ KTL GA + K+ I
Sbjct: 199 PRPQVDSAVIRLKIRQRPPVEVRDEALLFRVIRAAFGQRRKTLLNALSTGAVDGEGKETI 258
>gi|289627688|ref|ZP_06460642.1| dimethyladenosine transferase [Pseudomonas syringae pv. aesculi
str. NCPPB 3681]
gi|422583663|ref|ZP_16658784.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330868491|gb|EGH03200.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 268
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 116/226 (51%), Gaps = 14/226 (6%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ H+++ GQ+ L + V+D I+R P+D +LEIGPG G LT LL ++ +E
Sbjct: 5 YQHRARKRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTEGLLNSGAQLDVVE 64
Query: 60 IDERMVEILNRRAADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGISSPLVA 113
+D+ ++ IL G N+ DALK +F P+ VV N+PY IS+PL+
Sbjct: 65 LDKDLIPIL---TGQFGNKPNFNLHQGDALKFDFNSLGAEPRSLRVVGNLPYNISTPLIF 121
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ R +LQKE R+ A PG ++ RL++ V+ VE + +V F P
Sbjct: 122 HLLQNASLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHWRVEHLFNVGPGAFNPP 181
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P +P D R F+++ KTL T K
Sbjct: 182 PKVDSAIVRLVPYETLPHPAKDHRVLERIVREAFNQRRKTLRNTLK 227
>gi|448353217|ref|ZP_21541994.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natrialba hulunbeirensis JCM 10989]
gi|445640794|gb|ELY93880.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natrialba hulunbeirensis JCM 10989]
Length = 285
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 121/214 (56%), Gaps = 13/214 (6%)
Query: 7 SKGQHILTNQRVLDSI-VRKSSINPDDT-VLEIGPGTGNLTLKLLE---VSKKVHAIEID 61
++ QH L + RVLD + ++I+ D + VLEIG GTG LT +LLE + +E D
Sbjct: 18 NRDQHFLVDDRVLDRLPTYLTAIDADTSHVLEIGGGTGVLTDRLLETIGADDHLTVVERD 77
Query: 62 ERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKS 121
+ E L +D+ RL VI DAL+ + P+F V+N+PYG+SS + +L+
Sbjct: 78 PPLAEFLQEEFSDAIDAGRLTVIEGDALEVDLPEFTSSVSNLPYGVSSEITFRLL---PE 134
Query: 122 FRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV 181
R L+ Q+EFA R++A P SE+ RL+V+ + AD E V + K F P P V S+VV
Sbjct: 135 QRPLVLMFQQEFAERMVAEPDTSEYGRLSVSTQHYADAELVESIPKEAFSPAPAVQSAVV 194
Query: 182 IIRPKAEIPDVNLDE---WRAFTRTCFSKKNKTL 212
+ P+ PD +++ + F + F+++ KT+
Sbjct: 195 RLVPRE--PDYDVENEAFFLRFVKALFTQRRKTI 226
>gi|167031448|ref|YP_001666679.1| dimethyladenosine transferase [Pseudomonas putida GB-1]
gi|166857936|gb|ABY96343.1| dimethyladenosine transferase [Pseudomonas putida GB-1]
Length = 266
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 117/226 (51%), Gaps = 14/226 (6%)
Query: 3 FFHKSK---GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIE 59
+ H+++ GQ+ L + V+D I+R + + +LEIGPG G LT LL ++ +E
Sbjct: 5 YQHRARKRFGQNFLHDAGVIDRILRAINAKAGEHLLEIGPGQGALTEGLLGSGAQLDVVE 64
Query: 60 IDERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL------VVANIPYGISSPLVA 113
+D+ +V IL + AD G + DALK +F Q + VV N+PY IS+PL+
Sbjct: 65 LDKDLVPILQHKFADRG---NFRLHQGDALKFDFNQLGVPPRSLKVVGNLPYNISTPLIF 121
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
L+ R +LQKE R+ A PG ++ RL++ V+ VE + +V F P
Sbjct: 122 HLLSHAGLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPP 181
Query: 174 PKVDSSVVIIRPKAEIPDVNLDE--WRAFTRTCFSKKNKTLGATFK 217
PKVDS++V + P +P D R F+++ KTL T K
Sbjct: 182 PKVDSAIVRLVPHEVLPHPAKDAKLLEQVVREAFNQRRKTLRNTMK 227
>gi|345020779|ref|ZP_08784392.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Ornithinibacillus scapharcae TW25]
Length = 293
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/221 (35%), Positives = 122/221 (55%), Gaps = 15/221 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F KS GQ+ L + VL +I+ + I+ +EIGPG G LT +L S +V A EID+R
Sbjct: 23 FKKSLGQNFLIDVNVLKNIIGHAGIDKTTGTIEIGPGIGALTEQLAIHSDQVVAFEIDQR 82
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFD----------LVVANIPYGISSPLVA 113
++ IL +D + +NVI +D LK + Q +VAN+PY I++P++
Sbjct: 83 LLPILQDTLSD---FENINVIHEDILKADVQQVIEANFKENQPIHIVANLPYYITTPILM 139
Query: 114 KLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPC 173
KL+ S T+++QKE A R+ A P + L + V+ + + VM+V K F+P
Sbjct: 140 KLLRERLPVDSITVMIQKEVADRMAAKPNTKSYGSLTIAVQYYTEAKVVMNVPKTVFMPQ 199
Query: 174 PKVDSSVVIIRPKAEIPDVNLDEWRAFT--RTCFSKKNKTL 212
P VDSS++ + ++E P DE FT + CF+++ KTL
Sbjct: 200 PNVDSSILRLVSRSEPPVQVEDEDYFFTLVQACFAQRRKTL 240
>gi|167748007|ref|ZP_02420134.1| hypothetical protein ANACAC_02744 [Anaerostipes caccae DSM 14662]
gi|167652584|gb|EDR96713.1| dimethyladenosine transferase [Anaerostipes caccae DSM 14662]
Length = 286
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 122/220 (55%), Gaps = 14/220 (6%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K GQ+ L + VL+ I+ ++I DD VLEIGPG G +T L E +++V A+EID
Sbjct: 21 FQKKFGQNFLIDSHVLEKIIDAANITEDDFVLEIGPGIGTMTQYLSEHAREVMAVEIDHN 80
Query: 64 MVEILNRRAADSGFHDRLNVISKDALKTEFPQFDL---------VVANIPYGISSPLVAK 114
++ IL A +D + V+++D LK + + VVAN+PY I++P++
Sbjct: 81 LIPILKETLAG---YDNVEVLNEDILKVDIGKIAEKKNQGRPIKVVANLPYYITTPIIMG 137
Query: 115 LVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCP 174
L S T+++QKE A+R+ A PG ++ L++ V+ A+ V +V F+P P
Sbjct: 138 LFEKNVPMNSLTVMVQKEVAQRMQAGPGTKDYGALSLAVQFYAEPYIVANVPPNCFMPRP 197
Query: 175 KVDSSVVIIRPKAEIPDVNLDEWRAFT--RTCFSKKNKTL 212
KV S+V+ + ++P +E F+ R F+++ KTL
Sbjct: 198 KVGSAVIRLTRYKDMPVKVKNEQLMFSIIRASFNQRRKTL 237
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.136 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,293,384,354
Number of Sequences: 23463169
Number of extensions: 126240913
Number of successful extensions: 383527
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5806
Number of HSP's successfully gapped in prelim test: 3268
Number of HSP's that attempted gapping in prelim test: 370413
Number of HSP's gapped (non-prelim): 9207
length of query: 232
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 94
effective length of database: 9,121,278,045
effective search space: 857400136230
effective search space used: 857400136230
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 74 (33.1 bits)