Query 047897
Match_columns 232
No_of_seqs 243 out of 3569
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 07:01:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047897.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047897hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tqs_A Ribosomal RNA small sub 100.0 1.9E-50 6.5E-55 325.2 18.8 213 2-218 1-221 (255)
2 3fut_A Dimethyladenosine trans 100.0 7.3E-50 2.5E-54 323.9 20.3 218 2-228 19-243 (271)
3 3uzu_A Ribosomal RNA small sub 100.0 1E-48 3.5E-53 318.8 17.8 212 2-218 14-239 (279)
4 3gru_A Dimethyladenosine trans 100.0 4.6E-47 1.6E-51 310.7 19.2 212 2-218 22-236 (295)
5 3ftd_A Dimethyladenosine trans 100.0 1.2E-45 4E-50 296.7 17.1 209 2-218 3-215 (249)
6 1qyr_A KSGA, high level kasuga 100.0 4.9E-45 1.7E-49 293.3 15.5 204 10-218 1-215 (252)
7 1zq9_A Probable dimethyladenos 100.0 3.4E-43 1.2E-47 288.1 24.2 215 4-218 2-216 (285)
8 2h1r_A Dimethyladenosine trans 100.0 7.9E-42 2.7E-46 281.7 20.8 216 3-219 15-230 (299)
9 1i4w_A Mitochondrial replicati 100.0 2.2E-42 7.6E-47 288.2 14.3 210 3-218 25-292 (353)
10 1qam_A ERMC' methyltransferase 100.0 4.2E-39 1.4E-43 258.3 18.7 206 2-216 2-210 (244)
11 1yub_A Ermam, rRNA methyltrans 100.0 2E-35 6.9E-40 237.1 3.8 205 2-216 1-209 (245)
12 1wy7_A Hypothetical protein PH 99.7 2.1E-16 7E-21 122.8 12.3 104 2-109 19-126 (207)
13 3p9n_A Possible methyltransfer 99.6 1.8E-15 6.3E-20 115.9 9.8 95 14-109 25-127 (189)
14 2okc_A Type I restriction enzy 99.6 7.5E-15 2.6E-19 127.0 13.5 103 5-108 147-266 (445)
15 3tm4_A TRNA (guanine N2-)-meth 99.6 3.7E-15 1.2E-19 126.1 10.7 94 14-108 202-299 (373)
16 4gek_A TRNA (CMO5U34)-methyltr 99.6 9.2E-15 3.1E-19 117.8 11.8 77 28-104 68-148 (261)
17 1dus_A MJ0882; hypothetical pr 99.6 4.7E-14 1.6E-18 107.7 14.2 92 17-108 39-132 (194)
18 3evz_A Methyltransferase; NYSG 99.6 1.7E-14 5.8E-19 113.7 11.9 96 13-110 38-138 (230)
19 3gdh_A Trimethylguanosine synt 99.6 2.3E-15 7.9E-20 119.6 6.8 96 15-110 62-159 (241)
20 3tma_A Methyltransferase; thum 99.6 8E-15 2.7E-19 123.2 10.4 96 12-108 185-285 (354)
21 1nv8_A HEMK protein; class I a 99.6 7E-15 2.4E-19 119.9 9.6 94 17-110 110-207 (284)
22 1ne2_A Hypothetical protein TA 99.6 9.3E-15 3.2E-19 112.9 9.5 97 5-109 24-124 (200)
23 3lpm_A Putative methyltransfer 99.6 7.9E-15 2.7E-19 118.0 9.3 86 23-108 41-132 (259)
24 3lbf_A Protein-L-isoaspartate 99.6 3.9E-14 1.3E-18 110.0 11.8 93 12-105 59-153 (210)
25 3njr_A Precorrin-6Y methylase; 99.6 5.9E-14 2E-18 109.0 12.7 93 12-104 37-131 (204)
26 3e05_A Precorrin-6Y C5,15-meth 99.5 1.5E-13 5E-18 106.4 14.7 99 14-113 24-126 (204)
27 3mti_A RRNA methylase; SAM-dep 99.5 4E-14 1.4E-18 107.9 11.4 79 27-106 19-100 (185)
28 3ldu_A Putative methylase; str 99.5 2.2E-14 7.6E-19 121.6 10.7 94 15-108 180-314 (385)
29 3ldg_A Putative uncharacterize 99.5 3.2E-14 1.1E-18 120.4 11.6 94 15-108 179-313 (384)
30 3k0b_A Predicted N6-adenine-sp 99.5 2.8E-14 9.5E-19 121.3 11.3 94 15-108 186-320 (393)
31 1uwv_A 23S rRNA (uracil-5-)-me 99.5 6.1E-14 2.1E-18 120.8 13.3 100 17-117 273-378 (433)
32 2h00_A Methyltransferase 10 do 99.5 7.6E-14 2.6E-18 111.7 13.0 80 30-109 65-154 (254)
33 2fhp_A Methylase, putative; al 99.5 1.7E-14 5.8E-19 109.8 8.7 94 14-107 27-128 (187)
34 1nkv_A Hypothetical protein YJ 99.5 7.2E-14 2.5E-18 111.7 12.4 91 14-104 20-112 (256)
35 2ozv_A Hypothetical protein AT 99.5 2.3E-14 7.8E-19 115.4 9.4 85 24-108 30-128 (260)
36 2esr_A Methyltransferase; stru 99.5 2.7E-14 9.4E-19 108.0 9.1 91 16-106 16-111 (177)
37 2f8l_A Hypothetical protein LM 99.5 8.3E-14 2.8E-18 116.5 12.3 99 6-107 103-213 (344)
38 3fpf_A Mtnas, putative unchara 99.5 8.9E-14 3E-18 113.0 11.1 85 17-102 109-195 (298)
39 2ift_A Putative methylase HI07 99.5 1.4E-14 4.9E-19 112.1 6.2 92 16-107 38-137 (201)
40 2b3t_A Protein methyltransfera 99.5 1.2E-13 4E-18 112.1 11.1 92 17-110 97-191 (276)
41 3a27_A TYW2, uncharacterized p 99.5 8.9E-14 3.1E-18 112.7 10.3 100 6-106 95-197 (272)
42 2fpo_A Methylase YHHF; structu 99.5 2.6E-14 8.8E-19 110.8 6.8 91 16-107 39-134 (202)
43 3khk_A Type I restriction-modi 99.5 5.3E-14 1.8E-18 124.0 9.4 101 5-107 221-341 (544)
44 3hem_A Cyclopropane-fatty-acyl 99.5 4.6E-13 1.6E-17 109.8 14.5 88 17-105 59-147 (302)
45 3hm2_A Precorrin-6Y C5,15-meth 99.5 2E-13 6.7E-18 103.1 11.1 94 13-107 8-106 (178)
46 2ar0_A M.ecoki, type I restric 99.5 1.3E-13 4.3E-18 121.7 11.5 103 5-108 145-274 (541)
47 3q87_B N6 adenine specific DNA 99.5 4.9E-14 1.7E-18 106.3 7.6 86 12-108 3-91 (170)
48 2yxd_A Probable cobalt-precorr 99.5 2.6E-13 8.8E-18 102.6 11.5 102 13-117 18-121 (183)
49 3bus_A REBM, methyltransferase 99.5 2.9E-13 9.8E-18 109.3 12.5 91 16-106 47-140 (273)
50 3kkz_A Uncharacterized protein 99.5 4.5E-13 1.6E-17 107.9 13.2 92 15-106 30-125 (267)
51 1vbf_A 231AA long hypothetical 99.5 3.1E-13 1.1E-17 106.5 12.0 95 8-106 49-145 (231)
52 3lkd_A Type I restriction-modi 99.5 1.5E-13 5E-18 121.1 10.8 103 5-108 193-310 (542)
53 1vl5_A Unknown conserved prote 99.5 3E-13 1E-17 108.5 11.6 90 16-106 23-114 (260)
54 3ufb_A Type I restriction-modi 99.5 4.9E-13 1.7E-17 117.6 14.0 102 5-108 193-315 (530)
55 1pjz_A Thiopurine S-methyltran 99.5 9.9E-14 3.4E-18 107.6 8.5 88 18-105 10-111 (203)
56 2frn_A Hypothetical protein PH 99.5 1.8E-13 6E-18 111.3 10.3 89 17-107 114-204 (278)
57 3ntv_A MW1564 protein; rossman 99.5 2.2E-13 7.5E-18 107.8 10.4 100 14-113 55-160 (232)
58 2ih2_A Modification methylase 99.5 6.2E-14 2.1E-18 120.2 7.7 94 4-108 14-111 (421)
59 3f4k_A Putative methyltransfer 99.5 5.3E-13 1.8E-17 106.7 12.5 92 15-106 30-125 (257)
60 1ws6_A Methyltransferase; stru 99.5 5.2E-14 1.8E-18 105.5 6.1 91 14-106 23-121 (171)
61 3uwp_A Histone-lysine N-methyl 99.5 1.6E-13 5.5E-18 115.7 9.5 94 14-107 157-264 (438)
62 1l3i_A Precorrin-6Y methyltran 99.5 5.7E-13 2E-17 101.4 11.8 104 13-116 16-121 (192)
63 3eey_A Putative rRNA methylase 99.5 1.9E-13 6.7E-18 105.0 9.2 81 25-105 17-103 (197)
64 3mb5_A SAM-dependent methyltra 99.5 4.5E-13 1.5E-17 107.1 11.1 92 16-107 79-174 (255)
65 3dlc_A Putative S-adenosyl-L-m 99.5 3.2E-13 1.1E-17 105.0 10.0 89 16-105 30-121 (219)
66 3k6r_A Putative transferase PH 99.5 2.2E-13 7.4E-18 110.3 9.1 87 20-108 117-205 (278)
67 1xxl_A YCGJ protein; structura 99.5 7.5E-13 2.6E-17 105.0 12.1 88 16-104 7-96 (239)
68 4dzr_A Protein-(glutamine-N5) 99.5 1.6E-14 5.4E-19 112.2 2.3 91 17-109 16-115 (215)
69 3grz_A L11 mtase, ribosomal pr 99.5 3.2E-13 1.1E-17 104.5 9.7 80 28-108 58-138 (205)
70 3vc1_A Geranyl diphosphate 2-C 99.4 6.6E-13 2.2E-17 109.5 12.1 86 19-104 105-194 (312)
71 4dcm_A Ribosomal RNA large sub 99.4 4.5E-13 1.5E-17 113.2 11.2 91 18-108 210-305 (375)
72 1dl5_A Protein-L-isoaspartate 99.4 6E-13 2E-17 110.1 11.6 92 14-106 59-155 (317)
73 2yxe_A Protein-L-isoaspartate 99.4 8.2E-13 2.8E-17 102.9 11.4 93 13-106 60-157 (215)
74 2igt_A SAM dependent methyltra 99.4 1.9E-13 6.5E-18 113.7 8.2 95 12-106 134-236 (332)
75 1m6y_A S-adenosyl-methyltransf 99.4 2E-13 6.8E-18 111.8 8.0 94 12-107 8-110 (301)
76 1kpg_A CFA synthase;, cyclopro 99.4 9.4E-13 3.2E-17 107.1 11.9 87 17-104 51-138 (287)
77 3dmg_A Probable ribosomal RNA 99.4 7.9E-13 2.7E-17 111.9 11.6 88 18-107 219-310 (381)
78 2jjq_A Uncharacterized RNA met 99.4 1E-12 3.6E-17 112.6 12.4 94 14-109 273-367 (425)
79 2yx1_A Hypothetical protein MJ 99.4 4E-13 1.4E-17 112.0 9.5 78 29-108 194-271 (336)
80 3u81_A Catechol O-methyltransf 99.4 2.6E-13 9E-18 106.4 7.8 97 12-108 40-147 (221)
81 2o57_A Putative sarcosine dime 99.4 1.3E-12 4.5E-17 106.7 12.1 89 16-104 64-159 (297)
82 2fk8_A Methoxy mycolic acid sy 99.4 1.2E-12 4E-17 108.2 11.9 87 17-104 77-164 (318)
83 4hg2_A Methyltransferase type 99.4 3.2E-13 1.1E-17 108.4 8.1 84 16-108 27-112 (257)
84 3ege_A Putative methyltransfer 99.4 3E-13 1E-17 108.7 7.9 94 5-105 9-104 (261)
85 3ofk_A Nodulation protein S; N 99.4 4.9E-13 1.7E-17 104.2 8.6 87 17-106 38-125 (216)
86 1o9g_A RRNA methyltransferase; 99.4 1.3E-13 4.4E-18 110.2 5.4 92 17-108 38-181 (250)
87 3lec_A NADB-rossmann superfami 99.4 7.2E-13 2.4E-17 104.1 9.5 76 29-104 20-100 (230)
88 2xvm_A Tellurite resistance pr 99.4 1.6E-12 5.4E-17 99.7 11.3 85 21-106 23-108 (199)
89 2gb4_A Thiopurine S-methyltran 99.4 8E-13 2.7E-17 105.9 9.9 90 15-104 53-161 (252)
90 2qm3_A Predicted methyltransfe 99.4 1.3E-12 4.6E-17 110.4 11.7 102 5-108 145-254 (373)
91 3jwh_A HEN1; methyltransferase 99.4 1.1E-12 3.9E-17 102.3 10.4 91 16-106 15-113 (217)
92 4hc4_A Protein arginine N-meth 99.4 4.5E-13 1.5E-17 112.8 8.4 74 29-103 82-157 (376)
93 3gu3_A Methyltransferase; alph 99.4 1.4E-12 4.9E-17 106.0 11.1 93 12-106 3-100 (284)
94 3duw_A OMT, O-methyltransferas 99.4 7.6E-13 2.6E-17 103.7 9.1 92 15-106 43-144 (223)
95 3iv6_A Putative Zn-dependent a 99.4 2.9E-13 9.9E-18 108.6 6.7 89 16-106 31-121 (261)
96 3jwg_A HEN1, methyltransferase 99.4 1.3E-12 4.4E-17 102.1 10.2 91 15-105 14-112 (219)
97 3dh0_A SAM dependent methyltra 99.4 1.1E-12 3.7E-17 102.4 9.7 87 19-106 26-117 (219)
98 3v97_A Ribosomal RNA large sub 99.4 1.5E-12 5E-17 118.2 11.8 95 14-108 174-316 (703)
99 1wzn_A SAM-dependent methyltra 99.4 3.6E-12 1.2E-16 101.6 12.6 83 18-102 29-112 (252)
100 1jg1_A PIMT;, protein-L-isoasp 99.4 1.7E-12 5.9E-17 102.7 10.7 92 14-106 75-169 (235)
101 2yvl_A TRMI protein, hypotheti 99.4 5.5E-12 1.9E-16 100.2 13.6 91 16-106 77-169 (248)
102 2pbf_A Protein-L-isoaspartate 99.4 2.3E-12 7.8E-17 101.3 11.2 94 13-106 61-173 (227)
103 3b3j_A Histone-arginine methyl 99.4 1.5E-12 5E-17 113.4 11.0 89 19-108 147-238 (480)
104 2fyt_A Protein arginine N-meth 99.4 2E-12 6.8E-17 108.0 11.4 89 18-107 52-144 (340)
105 3dr5_A Putative O-methyltransf 99.4 1.6E-12 5.3E-17 102.2 10.1 87 18-104 44-138 (221)
106 3gnl_A Uncharacterized protein 99.4 1.4E-12 4.7E-17 103.3 9.7 75 29-103 20-99 (244)
107 2y1w_A Histone-arginine methyl 99.4 2.5E-12 8.4E-17 107.7 11.6 88 18-106 38-127 (348)
108 3ujc_A Phosphoethanolamine N-m 99.4 1.1E-12 3.6E-17 105.3 8.9 87 16-105 41-130 (266)
109 3r0q_C Probable protein argini 99.4 2E-12 6.7E-17 109.4 10.9 85 18-103 51-137 (376)
110 2pwy_A TRNA (adenine-N(1)-)-me 99.4 3.3E-12 1.1E-16 102.1 11.7 90 16-106 82-177 (258)
111 1yzh_A TRNA (guanine-N(7)-)-me 99.4 2.5E-12 8.4E-17 100.3 10.7 77 29-106 40-122 (214)
112 2yqz_A Hypothetical protein TT 99.4 1.3E-12 4.3E-17 104.7 9.2 92 15-108 19-117 (263)
113 3tfw_A Putative O-methyltransf 99.4 2E-12 6.9E-17 103.2 10.3 93 15-107 48-148 (248)
114 4htf_A S-adenosylmethionine-de 99.4 1.9E-12 6.5E-17 105.2 10.3 87 19-106 58-147 (285)
115 1ve3_A Hypothetical protein PH 99.4 2.6E-12 9E-17 100.6 10.7 83 18-104 28-112 (227)
116 3m70_A Tellurite resistance pr 99.4 1.7E-12 6E-17 105.5 9.8 82 24-107 114-196 (286)
117 1u2z_A Histone-lysine N-methyl 99.4 3.5E-12 1.2E-16 109.1 12.0 95 7-104 222-332 (433)
118 2b78_A Hypothetical protein SM 99.4 6.2E-13 2.1E-17 112.8 7.3 94 12-106 195-296 (385)
119 2nxc_A L11 mtase, ribosomal pr 99.4 1.2E-12 4.2E-17 104.9 8.6 79 28-108 118-197 (254)
120 3bt7_A TRNA (uracil-5-)-methyl 99.4 1.1E-12 3.8E-17 110.7 8.7 99 16-116 200-316 (369)
121 2gpy_A O-methyltransferase; st 99.4 2E-12 6.8E-17 102.1 9.6 102 13-114 37-145 (233)
122 3kr9_A SAM-dependent methyltra 99.4 2.3E-12 8E-17 101.0 9.9 75 29-103 14-93 (225)
123 1o54_A SAM-dependent O-methylt 99.4 3.3E-12 1.1E-16 103.5 11.1 92 16-107 98-193 (277)
124 1i1n_A Protein-L-isoaspartate 99.4 4.3E-12 1.5E-16 99.6 11.5 94 12-105 57-161 (226)
125 3lcc_A Putative methyl chlorid 99.4 1.5E-12 5.2E-17 102.8 8.9 87 18-105 55-142 (235)
126 3tr6_A O-methyltransferase; ce 99.4 1.3E-12 4.4E-17 102.5 8.4 91 14-104 48-149 (225)
127 2r6z_A UPF0341 protein in RSP 99.4 1.9E-13 6.4E-18 109.8 3.6 86 23-108 76-174 (258)
128 1i9g_A Hypothetical protein RV 99.4 3.6E-12 1.2E-16 103.3 11.2 92 15-106 84-182 (280)
129 3g5t_A Trans-aconitate 3-methy 99.4 4.8E-12 1.7E-16 103.6 11.7 92 16-108 23-126 (299)
130 3dtn_A Putative methyltransfer 99.4 4.6E-12 1.6E-16 99.8 11.2 87 18-107 31-121 (234)
131 3dxy_A TRNA (guanine-N(7)-)-me 99.4 2.3E-12 8E-17 101.0 9.2 74 30-104 34-114 (218)
132 2avd_A Catechol-O-methyltransf 99.4 2.5E-12 8.5E-17 101.1 9.4 94 11-104 50-154 (229)
133 2b25_A Hypothetical protein; s 99.4 3.8E-12 1.3E-16 106.0 10.9 93 16-108 91-200 (336)
134 3id6_C Fibrillarin-like rRNA/T 99.4 9.6E-12 3.3E-16 98.1 12.5 87 16-105 59-156 (232)
135 3c0k_A UPF0064 protein YCCW; P 99.4 1.7E-12 5.9E-17 110.5 8.7 94 12-107 204-305 (396)
136 2p35_A Trans-aconitate 2-methy 99.4 2.4E-12 8.4E-17 102.8 9.1 87 16-108 19-108 (259)
137 1g6q_1 HnRNP arginine N-methyl 99.4 2.9E-12 9.9E-17 106.5 9.9 86 19-105 27-115 (328)
138 3ajd_A Putative methyltransfer 99.3 8.3E-13 2.8E-17 107.0 6.2 88 20-108 73-169 (274)
139 4df3_A Fibrillarin-like rRNA/T 99.3 6.7E-12 2.3E-16 98.9 11.2 90 17-109 61-161 (233)
140 1yb2_A Hypothetical protein TA 99.3 3.5E-12 1.2E-16 103.3 9.9 88 18-106 98-190 (275)
141 1xdz_A Methyltransferase GIDB; 99.3 1.6E-12 5.5E-17 103.2 7.7 74 29-103 69-149 (240)
142 3ll7_A Putative methyltransfer 99.3 1.9E-12 6.6E-17 109.8 8.5 78 30-108 93-176 (410)
143 3q7e_A Protein arginine N-meth 99.3 2.7E-12 9.3E-17 107.5 9.3 77 27-104 63-142 (349)
144 2pjd_A Ribosomal RNA small sub 99.3 3.4E-12 1.2E-16 106.7 9.7 88 18-107 184-273 (343)
145 1r18_A Protein-L-isoaspartate( 99.3 4.1E-12 1.4E-16 99.9 9.7 95 9-105 62-173 (227)
146 1ixk_A Methyltransferase; open 99.3 3.3E-12 1.1E-16 105.6 9.3 90 17-107 105-199 (315)
147 3ccf_A Cyclopropane-fatty-acyl 99.3 1.5E-12 5.2E-17 105.5 7.2 86 16-107 43-129 (279)
148 2fca_A TRNA (guanine-N(7)-)-me 99.3 5.2E-12 1.8E-16 98.6 9.9 76 29-105 37-118 (213)
149 3g89_A Ribosomal RNA small sub 99.3 2.3E-12 7.8E-17 103.0 7.9 74 29-103 79-159 (249)
150 3g2m_A PCZA361.24; SAM-depende 99.3 4.3E-12 1.5E-16 103.9 9.8 86 15-101 68-156 (299)
151 3bkx_A SAM-dependent methyltra 99.3 2.9E-12 1E-16 103.4 8.4 89 17-105 30-132 (275)
152 2hnk_A SAM-dependent O-methylt 99.3 2.7E-12 9.1E-17 101.8 7.9 92 13-104 43-156 (239)
153 2as0_A Hypothetical protein PH 99.3 3.9E-12 1.3E-16 108.3 9.4 96 11-107 199-301 (396)
154 1jsx_A Glucose-inhibited divis 99.3 5E-12 1.7E-16 97.8 9.0 85 18-103 50-140 (207)
155 1fbn_A MJ fibrillarin homologu 99.3 6.5E-12 2.2E-16 99.0 9.8 86 17-105 58-153 (230)
156 3hnr_A Probable methyltransfer 99.3 3E-12 1E-16 99.9 7.5 82 20-106 35-117 (220)
157 3ocj_A Putative exported prote 99.3 4.2E-12 1.4E-16 104.3 8.7 80 27-106 115-198 (305)
158 2b9e_A NOL1/NOP2/SUN domain fa 99.3 5.3E-12 1.8E-16 103.9 9.3 87 21-108 93-187 (309)
159 1y8c_A S-adenosylmethionine-de 99.3 7.4E-12 2.5E-16 99.0 9.8 88 17-106 22-113 (246)
160 1sui_A Caffeoyl-COA O-methyltr 99.3 6.9E-12 2.4E-16 100.1 9.6 91 14-104 63-165 (247)
161 1zx0_A Guanidinoacetate N-meth 99.3 4.1E-12 1.4E-16 100.5 8.2 83 16-101 47-134 (236)
162 3mgg_A Methyltransferase; NYSG 99.3 8.5E-12 2.9E-16 100.8 10.2 88 18-106 25-116 (276)
163 3r3h_A O-methyltransferase, SA 99.3 6.9E-13 2.4E-17 105.6 3.6 93 12-104 42-145 (242)
164 2pxx_A Uncharacterized protein 99.3 1.2E-11 4.1E-16 95.8 10.6 91 11-105 24-117 (215)
165 4dmg_A Putative uncharacterize 99.3 6.7E-12 2.3E-16 106.5 9.5 92 12-106 197-291 (393)
166 3g5l_A Putative S-adenosylmeth 99.3 1E-11 3.5E-16 99.0 10.0 82 20-105 34-118 (253)
167 1wxx_A TT1595, hypothetical pr 99.3 3.2E-12 1.1E-16 108.4 7.0 92 12-107 194-291 (382)
168 2p8j_A S-adenosylmethionine-de 99.3 1.5E-11 5.3E-16 95.0 9.9 88 15-104 7-98 (209)
169 3c3y_A Pfomt, O-methyltransfer 99.3 1.5E-11 5.3E-16 97.4 10.0 91 14-104 54-156 (237)
170 2kw5_A SLR1183 protein; struct 99.3 2.2E-11 7.5E-16 93.8 10.4 83 17-104 19-103 (202)
171 1ri5_A MRNA capping enzyme; me 99.3 2.3E-11 7.7E-16 99.1 11.0 79 28-106 62-144 (298)
172 1nt2_A Fibrillarin-like PRE-rR 99.3 2.7E-11 9.1E-16 94.4 10.9 85 18-105 43-136 (210)
173 3c3p_A Methyltransferase; NP_9 99.3 1.1E-11 3.9E-16 96.2 8.7 75 29-104 55-135 (210)
174 3pfg_A N-methyltransferase; N, 99.3 2.2E-11 7.4E-16 97.8 10.3 69 29-103 49-118 (263)
175 3bkw_A MLL3908 protein, S-aden 99.3 1.9E-11 6.6E-16 96.6 9.9 81 21-105 34-117 (243)
176 3fzg_A 16S rRNA methylase; met 99.3 1.2E-11 4.1E-16 93.7 8.1 81 19-103 40-123 (200)
177 3sm3_A SAM-dependent methyltra 99.3 2.4E-11 8.4E-16 95.4 10.3 78 29-106 29-112 (235)
178 3ou2_A SAM-dependent methyltra 99.3 2.4E-11 8.3E-16 94.4 10.1 81 19-104 34-116 (218)
179 1g8a_A Fibrillarin-like PRE-rR 99.3 1.7E-11 5.9E-16 96.2 9.3 86 16-104 56-152 (227)
180 1xtp_A LMAJ004091AAA; SGPP, st 99.3 2E-11 6.8E-16 97.2 9.8 85 17-104 80-167 (254)
181 3g07_A 7SK snRNA methylphospha 99.3 5.9E-12 2E-16 102.9 6.8 87 19-105 33-187 (292)
182 2frx_A Hypothetical protein YE 99.3 8.7E-12 3E-16 108.4 8.1 87 21-108 106-200 (479)
183 3l8d_A Methyltransferase; stru 99.3 2.4E-11 8.1E-16 96.1 10.0 83 17-105 42-126 (242)
184 2oyr_A UPF0341 protein YHIQ; a 99.3 3.5E-12 1.2E-16 102.1 5.2 89 20-108 76-177 (258)
185 3d2l_A SAM-dependent methyltra 99.3 3.6E-11 1.2E-15 95.0 10.9 83 16-103 21-104 (243)
186 3cbg_A O-methyltransferase; cy 99.3 1.3E-11 4.3E-16 97.6 8.2 91 14-104 56-157 (232)
187 2r3s_A Uncharacterized protein 99.3 5.3E-11 1.8E-15 98.8 12.3 91 17-108 150-246 (335)
188 3m33_A Uncharacterized protein 99.3 2.7E-11 9.2E-16 95.2 9.9 79 17-102 36-118 (226)
189 3ckk_A TRNA (guanine-N(7)-)-me 99.3 2.7E-11 9.4E-16 95.9 9.9 76 29-105 45-133 (235)
190 3v97_A Ribosomal RNA large sub 99.3 2.1E-11 7.3E-16 110.6 10.4 96 12-109 523-623 (703)
191 3h2b_A SAM-dependent methyltra 99.3 1.4E-11 4.9E-16 94.9 8.0 79 16-104 31-111 (203)
192 2p7i_A Hypothetical protein; p 99.2 1.8E-11 6.3E-16 96.8 8.3 80 20-104 31-112 (250)
193 1x19_A CRTF-related protein; m 99.2 1.1E-10 3.7E-15 98.1 13.4 88 17-105 177-266 (359)
194 2vdv_E TRNA (guanine-N(7)-)-me 99.2 3.4E-11 1.2E-15 95.9 9.8 77 29-106 48-139 (246)
195 2yxl_A PH0851 protein, 450AA l 99.2 3.4E-11 1.2E-15 104.1 10.5 91 17-108 246-343 (450)
196 3s1s_A Restriction endonucleas 99.2 2.4E-11 8.1E-16 109.7 9.7 102 4-107 290-411 (878)
197 3htx_A HEN1; HEN1, small RNA m 99.2 3.4E-11 1.2E-15 109.0 10.7 89 17-106 708-807 (950)
198 3bgv_A MRNA CAP guanine-N7 met 99.2 2.6E-11 9.1E-16 99.8 9.0 93 16-108 18-127 (313)
199 3cgg_A SAM-dependent methyltra 99.2 5E-11 1.7E-15 90.8 10.0 75 22-103 39-115 (195)
200 3m4x_A NOL1/NOP2/SUN family pr 99.2 6.6E-12 2.3E-16 108.2 5.6 89 19-108 94-188 (456)
201 3bzb_A Uncharacterized protein 99.2 5.6E-11 1.9E-15 96.6 10.8 92 17-108 66-177 (281)
202 3m6w_A RRNA methylase; rRNA me 99.2 7.7E-12 2.6E-16 108.0 5.8 89 18-108 89-183 (464)
203 3i9f_A Putative type 11 methyl 99.2 6.1E-12 2.1E-16 94.3 4.4 78 22-106 9-86 (170)
204 3orh_A Guanidinoacetate N-meth 99.2 1.5E-11 5.1E-16 97.4 6.7 84 17-103 48-136 (236)
205 3thr_A Glycine N-methyltransfe 99.2 1.4E-11 4.8E-16 100.3 6.6 87 16-102 43-137 (293)
206 3p2e_A 16S rRNA methylase; met 99.2 1.6E-11 5.4E-16 96.6 6.6 77 29-106 23-108 (225)
207 2ex4_A Adrenal gland protein A 99.2 3.6E-11 1.2E-15 95.3 8.6 74 30-104 79-155 (241)
208 4azs_A Methyltransferase WBDD; 99.2 4.4E-11 1.5E-15 106.4 9.8 74 30-104 66-143 (569)
209 2ipx_A RRNA 2'-O-methyltransfe 99.2 6.9E-11 2.4E-15 93.2 10.0 77 25-104 72-156 (233)
210 3e23_A Uncharacterized protein 99.2 5.6E-11 1.9E-15 92.1 8.6 80 17-105 32-112 (211)
211 1sqg_A SUN protein, FMU protei 99.2 4.6E-11 1.6E-15 102.8 8.8 93 14-108 230-328 (429)
212 3mq2_A 16S rRNA methyltransfer 99.2 3.1E-11 1.1E-15 94.1 7.1 82 22-104 19-107 (218)
213 3ggd_A SAM-dependent methyltra 99.2 2.6E-11 8.8E-16 96.2 6.1 77 28-108 54-137 (245)
214 2bm8_A Cephalosporin hydroxyla 99.2 4.5E-11 1.6E-15 94.7 7.2 83 16-104 67-161 (236)
215 3bxo_A N,N-dimethyltransferase 99.2 1.2E-10 4.2E-15 91.7 9.6 67 29-101 39-106 (239)
216 3gwz_A MMCR; methyltransferase 99.2 5.8E-10 2E-14 94.0 14.1 85 18-104 190-277 (369)
217 4fsd_A Arsenic methyltransfera 99.2 8.3E-11 2.8E-15 99.7 8.6 81 28-108 81-179 (383)
218 1qzz_A RDMB, aclacinomycin-10- 99.2 2.5E-10 8.5E-15 96.2 11.5 89 19-109 171-263 (374)
219 2gs9_A Hypothetical protein TT 99.2 2E-10 6.9E-15 88.9 10.1 75 21-105 28-105 (211)
220 3frh_A 16S rRNA methylase; met 99.2 1.9E-10 6.3E-15 90.3 9.8 74 29-105 104-178 (253)
221 3adn_A Spermidine synthase; am 99.1 6.4E-11 2.2E-15 96.8 7.5 77 29-105 82-167 (294)
222 3bwc_A Spermidine synthase; SA 99.1 8E-11 2.7E-15 96.7 7.6 79 29-107 94-181 (304)
223 3i53_A O-methyltransferase; CO 99.1 2.5E-10 8.7E-15 94.7 10.7 80 23-104 162-244 (332)
224 3e8s_A Putative SAM dependent 99.1 5.1E-11 1.8E-15 92.9 6.0 80 20-106 42-127 (227)
225 3mcz_A O-methyltransferase; ad 99.1 2.7E-10 9.4E-15 95.2 10.8 84 21-105 169-258 (352)
226 1tw3_A COMT, carminomycin 4-O- 99.1 5E-10 1.7E-14 93.9 12.3 85 20-105 173-259 (360)
227 1iy9_A Spermidine synthase; ro 99.1 1.4E-10 4.6E-15 94.0 8.3 78 30-107 75-160 (275)
228 1xj5_A Spermidine synthase 1; 99.1 1.1E-10 3.6E-15 97.1 7.7 77 28-104 118-203 (334)
229 3dp7_A SAM-dependent methyltra 99.1 5.9E-10 2E-14 93.8 12.0 76 29-105 178-258 (363)
230 2i62_A Nicotinamide N-methyltr 99.1 1.6E-10 5.3E-15 92.5 8.0 79 27-105 53-167 (265)
231 2avn_A Ubiquinone/menaquinone 99.1 4.5E-10 1.6E-14 90.0 10.7 67 30-103 54-122 (260)
232 2qe6_A Uncharacterized protein 99.1 4.4E-10 1.5E-14 91.0 10.6 88 16-106 62-168 (274)
233 2vdw_A Vaccinia virus capping 99.1 3.1E-10 1.1E-14 93.1 9.8 75 30-104 48-138 (302)
234 2o07_A Spermidine synthase; st 99.1 1.7E-10 6E-15 94.7 8.2 79 28-106 93-179 (304)
235 1mjf_A Spermidine synthase; sp 99.1 1E-10 3.6E-15 95.0 6.5 78 29-107 74-164 (281)
236 1wg8_A Predicted S-adenosylmet 99.1 1.4E-10 4.9E-15 92.9 7.2 91 12-107 4-101 (285)
237 3dou_A Ribosomal RNA large sub 99.1 3.5E-10 1.2E-14 86.7 8.9 69 28-108 23-104 (191)
238 1p91_A Ribosomal RNA large sub 99.1 5.3E-10 1.8E-14 89.9 10.2 69 29-103 84-156 (269)
239 2ip2_A Probable phenazine-spec 99.1 4.9E-10 1.7E-14 93.0 10.3 86 17-105 155-243 (334)
240 1inl_A Spermidine synthase; be 99.1 2.5E-10 8.5E-15 93.4 7.8 77 30-106 90-174 (296)
241 1uir_A Polyamine aminopropyltr 99.1 3.5E-10 1.2E-14 93.3 8.7 79 29-107 76-163 (314)
242 3dli_A Methyltransferase; PSI- 99.1 1.4E-10 4.7E-15 91.8 5.7 79 17-104 27-110 (240)
243 2pt6_A Spermidine synthase; tr 99.1 1.8E-10 6E-15 95.4 6.6 76 29-104 115-198 (321)
244 2a14_A Indolethylamine N-methy 99.1 1.5E-10 5.1E-15 93.1 6.0 79 27-105 52-166 (263)
245 2wa2_A Non-structural protein 99.1 3.9E-11 1.3E-15 97.2 2.4 83 20-104 72-157 (276)
246 3lcv_B Sisomicin-gentamicin re 99.1 4.4E-10 1.5E-14 89.1 8.0 75 29-105 131-208 (281)
247 3axs_A Probable N(2),N(2)-dime 99.0 1.8E-10 6.3E-15 97.4 6.2 85 29-114 51-143 (392)
248 2b2c_A Spermidine synthase; be 99.0 1.9E-10 6.7E-15 94.8 6.2 77 29-105 107-191 (314)
249 3gjy_A Spermidine synthase; AP 99.0 2.9E-10 1E-14 93.4 7.1 72 32-104 91-168 (317)
250 3hp7_A Hemolysin, putative; st 99.0 6.8E-11 2.3E-15 96.1 3.3 88 18-111 72-167 (291)
251 2oxt_A Nucleoside-2'-O-methylt 99.0 4.6E-11 1.6E-15 96.2 2.2 84 19-104 63-149 (265)
252 3cc8_A Putative methyltransfer 99.0 6.9E-10 2.4E-14 86.6 8.6 79 18-105 21-103 (230)
253 2i7c_A Spermidine synthase; tr 99.0 4.3E-10 1.5E-14 91.4 7.2 79 28-106 76-162 (283)
254 2g72_A Phenylethanolamine N-me 99.0 6.1E-10 2.1E-14 90.6 7.7 88 19-106 58-185 (289)
255 2dul_A N(2),N(2)-dimethylguano 99.0 6.7E-10 2.3E-14 93.8 7.9 82 30-113 47-148 (378)
256 1ej0_A FTSJ; methyltransferase 99.0 3.1E-10 1.1E-14 84.8 5.1 77 20-108 11-101 (180)
257 2cmg_A Spermidine synthase; tr 99.0 3.5E-10 1.2E-14 91.0 5.2 75 29-104 71-148 (262)
258 3opn_A Putative hemolysin; str 99.0 2.7E-10 9.3E-15 90.0 4.2 56 17-72 23-80 (232)
259 2plw_A Ribosomal RNA methyltra 99.0 1.6E-09 5.4E-14 83.2 7.6 74 22-107 13-118 (201)
260 2p41_A Type II methyltransfera 98.9 4.3E-10 1.5E-14 92.4 4.1 80 23-106 75-159 (305)
261 1af7_A Chemotaxis receptor met 98.9 2.8E-09 9.5E-14 86.1 8.5 92 11-102 85-220 (274)
262 4a6d_A Hydroxyindole O-methylt 98.9 9.9E-09 3.4E-13 86.0 11.7 91 19-111 168-261 (353)
263 2aot_A HMT, histamine N-methyl 98.9 8.1E-10 2.8E-14 90.1 4.7 77 29-106 51-146 (292)
264 3lst_A CALO1 methyltransferase 98.9 4.9E-09 1.7E-13 87.6 8.1 83 19-105 173-257 (348)
265 1vlm_A SAM-dependent methyltra 98.9 8.2E-09 2.8E-13 80.4 8.6 63 31-105 48-112 (219)
266 2qfm_A Spermine synthase; sper 98.8 2.8E-09 9.7E-14 88.7 5.9 76 30-105 188-277 (364)
267 3giw_A Protein of unknown func 98.8 2.5E-08 8.6E-13 80.1 11.0 92 16-108 63-173 (277)
268 4e2x_A TCAB9; kijanose, tetron 98.8 2.8E-10 9.7E-15 97.3 -0.5 87 16-106 93-182 (416)
269 3cvo_A Methyltransferase-like 98.8 1.8E-08 6.1E-13 77.4 8.8 72 15-90 17-91 (202)
270 2k4m_A TR8_protein, UPF0146 pr 98.8 1.2E-08 4.2E-13 73.4 6.5 80 15-112 22-107 (153)
271 1fp1_D Isoliquiritigenin 2'-O- 98.8 1.2E-08 4.2E-13 85.9 7.6 77 20-105 198-277 (372)
272 1fp2_A Isoflavone O-methyltran 98.8 1.1E-08 3.8E-13 85.5 7.3 70 27-105 185-256 (352)
273 2nyu_A Putative ribosomal RNA 98.8 2.6E-08 8.9E-13 75.9 8.2 68 28-107 20-109 (196)
274 3reo_A (ISO)eugenol O-methyltr 98.7 2.4E-08 8.4E-13 84.0 8.6 77 20-105 192-271 (368)
275 3p9c_A Caffeic acid O-methyltr 98.7 3.2E-08 1.1E-12 83.2 9.1 77 19-104 189-268 (364)
276 4gqb_A Protein arginine N-meth 98.7 2.5E-08 8.5E-13 88.8 7.0 72 31-103 358-436 (637)
277 2zig_A TTHA0409, putative modi 98.7 1.1E-07 3.6E-12 77.8 9.6 61 14-75 220-280 (297)
278 1zg3_A Isoflavanone 4'-O-methy 98.7 2.4E-08 8.4E-13 83.6 5.7 77 21-106 182-262 (358)
279 2zfu_A Nucleomethylin, cerebra 98.6 2.6E-08 8.9E-13 77.2 5.1 60 28-106 65-126 (215)
280 4fzv_A Putative methyltransfer 98.6 5.3E-08 1.8E-12 81.4 6.3 92 17-108 135-236 (359)
281 3tka_A Ribosomal RNA small sub 98.6 7.1E-08 2.4E-12 79.1 5.6 91 12-107 39-140 (347)
282 3sso_A Methyltransferase; macr 98.5 1.2E-07 4.2E-12 79.8 6.4 78 16-104 203-297 (419)
283 4auk_A Ribosomal RNA large sub 98.5 2.6E-07 8.8E-12 76.9 7.2 83 28-118 209-295 (375)
284 3ua3_A Protein arginine N-meth 98.4 1.4E-07 4.7E-12 84.3 5.0 73 31-104 410-504 (745)
285 2xyq_A Putative 2'-O-methyl tr 98.4 2.6E-07 8.8E-12 75.1 5.5 65 26-106 59-134 (290)
286 1g60_A Adenine-specific methyl 98.4 1E-06 3.5E-11 70.5 8.3 62 14-76 197-258 (260)
287 3o4f_A Spermidine synthase; am 98.4 1.7E-06 5.8E-11 70.1 9.5 77 29-105 82-167 (294)
288 2oo3_A Protein involved in cat 98.2 1.4E-07 4.8E-12 75.7 -0.7 75 31-108 92-172 (283)
289 3p8z_A Mtase, non-structural p 98.1 1.5E-05 5E-10 61.9 8.4 88 19-108 67-157 (267)
290 3lkz_A Non-structural protein 98.1 7E-06 2.4E-10 65.7 6.4 85 19-105 83-170 (321)
291 2ld4_A Anamorsin; methyltransf 98.0 1.6E-06 5.5E-11 64.8 1.8 60 26-104 8-72 (176)
292 3g7u_A Cytosine-specific methy 98.0 1.6E-05 5.3E-10 67.0 7.5 70 32-107 3-83 (376)
293 3evf_A RNA-directed RNA polyme 98.0 8E-06 2.7E-10 65.1 5.0 83 21-106 65-151 (277)
294 1g55_A DNA cytosine methyltran 97.9 7.1E-06 2.4E-10 68.3 4.9 69 32-106 3-79 (343)
295 3gcz_A Polyprotein; flavivirus 97.9 5.2E-06 1.8E-10 66.3 3.4 83 21-106 81-167 (282)
296 3c6k_A Spermine synthase; sper 97.9 1.7E-05 5.7E-10 66.4 6.0 75 30-104 205-293 (381)
297 2c7p_A Modification methylase 97.8 4.9E-05 1.7E-09 62.8 6.7 70 31-108 11-84 (327)
298 2px2_A Genome polyprotein [con 97.7 1.4E-05 4.8E-10 62.9 2.5 84 21-107 64-151 (269)
299 2qy6_A UPF0209 protein YFCK; s 97.7 2.4E-05 8.4E-10 62.3 3.8 75 29-103 59-181 (257)
300 1boo_A Protein (N-4 cytosine-s 97.6 8.9E-05 3E-09 61.1 6.7 62 14-76 237-298 (323)
301 2qrv_A DNA (cytosine-5)-methyl 97.6 0.00013 4.4E-09 59.3 7.2 73 29-107 14-95 (295)
302 1eg2_A Modification methylase 97.6 0.00013 4.3E-09 60.1 7.0 62 14-76 227-291 (319)
303 2wk1_A NOVP; transferase, O-me 97.5 0.00028 9.6E-09 56.9 7.2 75 30-104 106-218 (282)
304 3qv2_A 5-cytosine DNA methyltr 97.4 0.00023 7.9E-09 58.6 6.5 71 31-108 10-89 (327)
305 4h0n_A DNMT2; SAH binding, tra 97.4 0.00015 5E-09 60.0 5.0 70 32-107 4-81 (333)
306 3ubt_Y Modification methylase 97.4 0.00029 9.8E-09 58.0 6.8 68 33-107 2-73 (331)
307 2py6_A Methyltransferase FKBM; 97.3 0.00087 3E-08 57.0 8.3 63 28-90 224-293 (409)
308 3eld_A Methyltransferase; flav 97.2 0.00012 4.2E-09 58.8 2.1 77 28-106 79-158 (300)
309 3me5_A Cytosine-specific methy 97.2 0.0004 1.4E-08 60.1 5.0 76 31-109 88-183 (482)
310 3b5i_A S-adenosyl-L-methionine 96.9 0.0043 1.5E-07 51.9 9.3 92 18-109 35-164 (374)
311 3swr_A DNA (cytosine-5)-methyl 96.1 0.006 2E-07 57.2 5.5 70 31-106 540-629 (1002)
312 1zkd_A DUF185; NESG, RPR58, st 96.0 0.034 1.2E-06 46.6 9.1 51 31-84 81-140 (387)
313 2efj_A 3,7-dimethylxanthine me 95.8 0.022 7.6E-07 47.7 7.2 76 31-109 53-163 (384)
314 3r24_A NSP16, 2'-O-methyl tran 95.8 0.0093 3.2E-07 47.9 4.6 99 27-143 106-212 (344)
315 4f3n_A Uncharacterized ACR, CO 95.8 0.017 5.8E-07 49.1 6.2 65 10-74 109-188 (432)
316 4ft4_B DNA (cytosine-5)-methyl 95.6 0.022 7.4E-07 52.4 7.0 42 31-72 212-260 (784)
317 4dkj_A Cytosine-specific methy 95.1 0.027 9.3E-07 47.6 5.3 43 32-74 11-60 (403)
318 3av4_A DNA (cytosine-5)-methyl 95.0 0.042 1.4E-06 53.1 6.9 71 31-107 851-941 (1330)
319 4fn4_A Short chain dehydrogena 94.8 0.13 4.4E-06 40.6 8.3 72 30-103 6-92 (254)
320 1m6e_X S-adenosyl-L-methionnin 94.7 0.021 7.2E-07 47.5 3.5 80 31-110 52-154 (359)
321 3fwz_A Inner membrane protein 94.5 0.086 2.9E-06 37.3 6.0 70 31-108 7-84 (140)
322 1rjd_A PPM1P, carboxy methyl t 94.3 0.15 5E-06 42.0 7.6 62 30-91 97-179 (334)
323 2dph_A Formaldehyde dismutase; 94.2 0.11 3.9E-06 43.5 7.1 47 24-70 179-228 (398)
324 3ic5_A Putative saccharopine d 94.2 0.33 1.1E-05 32.5 8.3 78 31-118 5-92 (118)
325 3llv_A Exopolyphosphatase-rela 94.1 0.2 6.9E-06 35.2 7.3 64 31-104 6-79 (141)
326 3ucx_A Short chain dehydrogena 93.8 0.4 1.4E-05 37.6 9.1 72 30-103 10-96 (264)
327 1f8f_A Benzyl alcohol dehydrog 93.6 0.19 6.4E-06 41.7 7.3 48 24-71 184-234 (371)
328 3s2e_A Zinc-containing alcohol 93.5 0.28 9.5E-06 40.1 8.0 49 22-70 158-208 (340)
329 3sju_A Keto reductase; short-c 93.4 0.32 1.1E-05 38.5 8.1 72 30-103 23-109 (279)
330 4g81_D Putative hexonate dehyd 93.3 0.23 7.7E-06 39.2 6.8 72 30-103 8-94 (255)
331 3ioy_A Short-chain dehydrogena 92.9 0.51 1.7E-05 38.2 8.7 74 30-103 7-95 (319)
332 1pl8_A Human sorbitol dehydrog 92.9 0.32 1.1E-05 40.0 7.5 47 24-70 165-214 (356)
333 3lyl_A 3-oxoacyl-(acyl-carrier 92.9 0.64 2.2E-05 35.8 8.9 72 30-103 4-90 (247)
334 4da9_A Short-chain dehydrogena 92.5 0.7 2.4E-05 36.6 8.9 73 30-104 28-116 (280)
335 1xg5_A ARPG836; short chain de 92.3 0.69 2.4E-05 36.4 8.6 74 30-103 31-119 (279)
336 1kol_A Formaldehyde dehydrogen 92.3 0.46 1.6E-05 39.7 7.9 46 25-70 180-228 (398)
337 3o26_A Salutaridine reductase; 92.3 0.67 2.3E-05 36.8 8.6 74 30-104 11-100 (311)
338 2qq5_A DHRS1, dehydrogenase/re 92.2 0.64 2.2E-05 36.2 8.2 72 30-103 4-91 (260)
339 1yb1_A 17-beta-hydroxysteroid 92.1 0.88 3E-05 35.7 8.9 71 30-103 30-116 (272)
340 1uuf_A YAHK, zinc-type alcohol 92.1 0.44 1.5E-05 39.5 7.3 47 24-70 188-236 (369)
341 3l4b_C TRKA K+ channel protien 91.9 0.51 1.7E-05 35.8 7.1 66 34-108 3-78 (218)
342 2ae2_A Protein (tropinone redu 91.9 0.78 2.7E-05 35.7 8.3 72 30-103 8-95 (260)
343 3r1i_A Short-chain type dehydr 91.7 0.44 1.5E-05 37.7 6.8 72 30-103 31-117 (276)
344 2rhc_B Actinorhodin polyketide 91.7 1 3.5E-05 35.5 8.9 72 30-103 21-107 (277)
345 1lss_A TRK system potassium up 91.7 2.2 7.5E-05 29.2 9.8 66 31-105 4-79 (140)
346 3sx2_A Putative 3-ketoacyl-(ac 91.7 0.78 2.7E-05 36.1 8.2 72 30-103 12-110 (278)
347 4fgs_A Probable dehydrogenase 91.7 0.45 1.5E-05 37.9 6.7 69 30-103 28-111 (273)
348 1e3j_A NADP(H)-dependent ketos 91.6 0.58 2E-05 38.4 7.5 47 24-70 162-210 (352)
349 4egf_A L-xylulose reductase; s 91.6 1 3.4E-05 35.3 8.7 72 30-103 19-106 (266)
350 3pxx_A Carveol dehydrogenase; 91.5 0.85 2.9E-05 35.9 8.3 72 30-103 9-107 (287)
351 3fpc_A NADP-dependent alcohol 91.5 0.49 1.7E-05 38.8 7.0 50 22-71 158-210 (352)
352 3uve_A Carveol dehydrogenase ( 91.4 0.88 3E-05 36.0 8.3 72 30-103 10-112 (286)
353 1ae1_A Tropinone reductase-I; 91.4 0.92 3.1E-05 35.7 8.3 72 30-103 20-107 (273)
354 3two_A Mannitol dehydrogenase; 91.3 0.38 1.3E-05 39.4 6.2 73 22-103 168-242 (348)
355 3lf2_A Short chain oxidoreduct 91.3 1 3.4E-05 35.2 8.4 74 30-103 7-95 (265)
356 3pgx_A Carveol dehydrogenase; 91.3 0.96 3.3E-05 35.7 8.4 72 30-103 14-113 (280)
357 3uog_A Alcohol dehydrogenase; 91.3 0.52 1.8E-05 38.9 7.0 48 24-71 183-232 (363)
358 3t4x_A Oxidoreductase, short c 91.3 0.96 3.3E-05 35.4 8.3 74 30-103 9-93 (267)
359 3t7c_A Carveol dehydrogenase; 91.3 0.93 3.2E-05 36.2 8.3 72 30-103 27-125 (299)
360 1id1_A Putative potassium chan 91.2 0.9 3.1E-05 32.3 7.4 67 32-105 4-81 (153)
361 3qiv_A Short-chain dehydrogena 91.1 1.3 4.5E-05 34.1 8.9 72 30-103 8-94 (253)
362 3h7a_A Short chain dehydrogena 91.1 0.87 3E-05 35.4 7.8 72 30-103 6-91 (252)
363 3rkr_A Short chain oxidoreduct 91.0 1.3 4.4E-05 34.5 8.7 73 30-104 28-115 (262)
364 4ibo_A Gluconate dehydrogenase 90.9 0.49 1.7E-05 37.3 6.2 72 30-103 25-111 (271)
365 1geg_A Acetoin reductase; SDR 90.7 1.5 5.1E-05 34.0 8.8 70 32-103 3-87 (256)
366 3rku_A Oxidoreductase YMR226C; 90.6 1.4 4.6E-05 35.1 8.7 74 30-103 32-123 (287)
367 3cxt_A Dehydrogenase with diff 90.6 1.2 4.3E-05 35.4 8.4 72 30-103 33-119 (291)
368 1e7w_A Pteridine reductase; di 90.6 1.5 5.1E-05 34.8 8.9 61 30-92 8-73 (291)
369 1pqw_A Polyketide synthase; ro 90.5 0.42 1.4E-05 35.5 5.2 47 24-70 32-81 (198)
370 3tsc_A Putative oxidoreductase 90.4 1.3 4.3E-05 34.9 8.3 72 30-103 10-109 (277)
371 3ftp_A 3-oxoacyl-[acyl-carrier 90.4 0.77 2.6E-05 36.2 6.9 72 30-103 27-113 (270)
372 4fs3_A Enoyl-[acyl-carrier-pro 90.4 0.86 2.9E-05 35.6 7.2 74 30-104 5-95 (256)
373 4g65_A TRK system potassium up 90.2 0.46 1.6E-05 40.8 5.8 61 32-101 4-74 (461)
374 1cdo_A Alcohol dehydrogenase; 90.2 0.58 2E-05 38.7 6.3 47 24-70 186-235 (374)
375 3m6i_A L-arabinitol 4-dehydrog 90.0 0.84 2.9E-05 37.5 7.2 49 23-71 172-223 (363)
376 3grk_A Enoyl-(acyl-carrier-pro 90.0 1.7 5.9E-05 34.5 8.8 72 30-104 30-118 (293)
377 3tjr_A Short chain dehydrogena 89.9 1.8 6.2E-05 34.6 8.9 72 30-103 30-116 (301)
378 3gms_A Putative NADPH:quinone 89.9 0.46 1.6E-05 38.7 5.5 49 23-71 137-188 (340)
379 1piw_A Hypothetical zinc-type 89.8 0.68 2.3E-05 38.1 6.4 47 24-70 173-221 (360)
380 1p0f_A NADP-dependent alcohol 89.8 0.59 2E-05 38.7 6.1 47 24-70 185-234 (373)
381 3l9w_A Glutathione-regulated p 89.8 0.6 2.1E-05 39.5 6.1 65 31-105 4-78 (413)
382 3c85_A Putative glutathione-re 89.8 0.68 2.3E-05 34.0 5.8 66 31-104 39-114 (183)
383 3o38_A Short chain dehydrogena 89.7 1.9 6.6E-05 33.4 8.8 74 30-104 21-110 (266)
384 2jhf_A Alcohol dehydrogenase E 89.7 0.68 2.3E-05 38.3 6.3 47 24-70 185-234 (374)
385 3gaf_A 7-alpha-hydroxysteroid 89.7 1.6 5.4E-05 33.9 8.2 72 30-103 11-97 (256)
386 2qhx_A Pteridine reductase 1; 89.6 1.9 6.6E-05 34.9 8.9 61 30-92 45-110 (328)
387 3abi_A Putative uncharacterize 89.5 0.73 2.5E-05 38.1 6.4 79 31-120 16-102 (365)
388 1w6u_A 2,4-dienoyl-COA reducta 89.5 2 6.7E-05 34.1 8.8 72 30-103 25-112 (302)
389 3imf_A Short chain dehydrogena 89.5 1.4 4.8E-05 34.2 7.8 72 30-103 5-91 (257)
390 2fzw_A Alcohol dehydrogenase c 89.4 0.7 2.4E-05 38.2 6.2 48 24-71 184-234 (373)
391 1e3i_A Alcohol dehydrogenase, 89.4 0.73 2.5E-05 38.1 6.4 47 24-70 189-238 (376)
392 4e6p_A Probable sorbitol dehyd 89.4 1.8 6.2E-05 33.6 8.4 69 30-103 7-90 (259)
393 3tfo_A Putative 3-oxoacyl-(acy 89.4 1.7 6E-05 34.0 8.3 72 30-103 3-89 (264)
394 3oec_A Carveol dehydrogenase ( 89.3 1.3 4.6E-05 35.6 7.7 72 30-103 45-143 (317)
395 3v8b_A Putative dehydrogenase, 89.2 2.2 7.4E-05 33.8 8.8 72 30-103 27-113 (283)
396 4ej6_A Putative zinc-binding d 89.1 1.1 3.9E-05 37.0 7.3 49 23-71 175-226 (370)
397 2uyo_A Hypothetical protein ML 89.1 1.7 5.7E-05 35.2 8.1 58 32-90 104-164 (310)
398 3ius_A Uncharacterized conserv 89.1 2.6 8.9E-05 32.9 9.2 63 32-104 6-72 (286)
399 1jvb_A NAD(H)-dependent alcoho 89.0 1.4 4.7E-05 36.0 7.7 48 23-70 163-214 (347)
400 1v3u_A Leukotriene B4 12- hydr 89.0 0.96 3.3E-05 36.7 6.7 46 24-69 139-187 (333)
401 3f9i_A 3-oxoacyl-[acyl-carrier 88.9 2 6.7E-05 33.0 8.2 70 30-104 13-93 (249)
402 2hcy_A Alcohol dehydrogenase 1 88.9 0.9 3.1E-05 37.1 6.5 48 23-70 162-212 (347)
403 1xq1_A Putative tropinone redu 88.9 1.4 4.9E-05 34.1 7.5 71 30-103 13-100 (266)
404 3oig_A Enoyl-[acyl-carrier-pro 88.8 2 6.8E-05 33.4 8.2 74 30-104 6-96 (266)
405 4dry_A 3-oxoacyl-[acyl-carrier 88.8 1 3.5E-05 35.7 6.6 73 30-103 32-119 (281)
406 3ged_A Short-chain dehydrogena 88.8 1 3.4E-05 35.3 6.3 66 32-103 3-83 (247)
407 3awd_A GOX2181, putative polyo 88.7 2.7 9.2E-05 32.3 8.9 71 30-103 12-98 (260)
408 1mxh_A Pteridine reductase 2; 88.7 1.9 6.4E-05 33.8 8.0 71 30-103 10-102 (276)
409 3f1l_A Uncharacterized oxidore 88.7 1.7 5.8E-05 33.6 7.7 73 30-103 11-100 (252)
410 1rjw_A ADH-HT, alcohol dehydro 88.6 1.4 4.9E-05 35.8 7.5 47 24-70 158-206 (339)
411 2h6e_A ADH-4, D-arabinose 1-de 88.5 1.1 3.9E-05 36.5 6.8 44 27-71 168-215 (344)
412 2jah_A Clavulanic acid dehydro 88.3 3.1 0.0001 32.0 8.9 72 30-103 6-92 (247)
413 3jv7_A ADH-A; dehydrogenase, n 88.3 1.3 4.6E-05 36.0 7.1 44 27-70 168-214 (345)
414 3uko_A Alcohol dehydrogenase c 88.2 0.62 2.1E-05 38.6 5.1 48 23-70 186-236 (378)
415 3op4_A 3-oxoacyl-[acyl-carrier 87.9 1.9 6.6E-05 33.2 7.5 69 30-103 8-91 (248)
416 4b7c_A Probable oxidoreductase 87.9 0.95 3.3E-05 36.7 6.0 45 24-68 143-190 (336)
417 1vj0_A Alcohol dehydrogenase, 87.7 1.6 5.6E-05 36.1 7.4 47 24-70 188-238 (380)
418 3svt_A Short-chain type dehydr 87.6 3.4 0.00011 32.4 8.9 74 30-103 10-99 (281)
419 1zem_A Xylitol dehydrogenase; 87.6 3.5 0.00012 32.0 8.9 72 30-103 6-92 (262)
420 3zv4_A CIS-2,3-dihydrobiphenyl 87.5 2 6.9E-05 33.8 7.5 69 30-103 4-87 (281)
421 2eih_A Alcohol dehydrogenase; 87.4 1.5 5.2E-05 35.6 6.9 45 26-70 162-209 (343)
422 3qlj_A Short chain dehydrogena 87.3 1.1 3.8E-05 36.1 6.1 72 30-103 26-122 (322)
423 3v2h_A D-beta-hydroxybutyrate 87.3 2.7 9.2E-05 33.1 8.2 73 30-103 24-112 (281)
424 3pk0_A Short-chain dehydrogena 86.9 3.1 0.00011 32.3 8.3 73 30-103 9-96 (262)
425 2j3h_A NADP-dependent oxidored 86.8 1.2 4.1E-05 36.2 6.0 47 24-70 149-198 (345)
426 3nyw_A Putative oxidoreductase 86.6 3.5 0.00012 31.8 8.4 74 30-103 6-95 (250)
427 3iht_A S-adenosyl-L-methionine 86.6 1.9 6.4E-05 31.2 6.0 43 17-60 28-72 (174)
428 4hp8_A 2-deoxy-D-gluconate 3-d 86.6 3.4 0.00012 32.2 8.2 70 30-103 8-87 (247)
429 4imr_A 3-oxoacyl-(acyl-carrier 86.6 1.9 6.3E-05 34.0 6.8 72 30-103 32-117 (275)
430 3k31_A Enoyl-(acyl-carrier-pro 86.5 1.6 5.6E-05 34.7 6.5 72 30-104 29-117 (296)
431 2b4q_A Rhamnolipids biosynthes 86.3 2.2 7.7E-05 33.5 7.2 71 30-103 28-113 (276)
432 3goh_A Alcohol dehydrogenase, 86.3 0.96 3.3E-05 36.4 5.1 47 24-71 136-184 (315)
433 2c0c_A Zinc binding alcohol de 86.2 2.2 7.6E-05 35.0 7.4 47 24-70 157-206 (362)
434 1iy8_A Levodione reductase; ox 86.2 4.8 0.00016 31.2 9.0 74 30-103 12-100 (267)
435 3grp_A 3-oxoacyl-(acyl carrier 85.9 2.5 8.6E-05 33.0 7.3 70 30-104 26-110 (266)
436 3tox_A Short chain dehydrogena 85.8 1.7 5.7E-05 34.4 6.2 72 30-103 7-93 (280)
437 4dyv_A Short-chain dehydrogena 85.7 2.1 7.1E-05 33.7 6.7 69 30-103 27-110 (272)
438 3rd5_A Mypaa.01249.C; ssgcid, 85.7 2.5 8.5E-05 33.4 7.2 69 30-103 15-94 (291)
439 4eso_A Putative oxidoreductase 85.7 4.8 0.00016 31.1 8.7 69 30-103 7-90 (255)
440 4iin_A 3-ketoacyl-acyl carrier 85.7 3.8 0.00013 31.9 8.2 72 30-103 28-115 (271)
441 3ai3_A NADPH-sorbose reductase 85.6 4.9 0.00017 31.0 8.8 72 30-103 6-93 (263)
442 1xu9_A Corticosteroid 11-beta- 85.6 3.9 0.00013 32.1 8.3 71 30-102 27-113 (286)
443 1yb5_A Quinone oxidoreductase; 85.6 2 6.9E-05 35.2 6.7 46 25-70 165-213 (351)
444 1fmc_A 7 alpha-hydroxysteroid 85.5 3.9 0.00013 31.3 8.1 71 30-103 10-96 (255)
445 3jyn_A Quinone oxidoreductase; 85.4 1.7 5.7E-05 35.1 6.1 48 24-71 134-184 (325)
446 2d8a_A PH0655, probable L-thre 85.4 1.8 6.2E-05 35.3 6.4 46 24-70 162-210 (348)
447 3l77_A Short-chain alcohol deh 85.3 5.6 0.00019 30.0 8.9 71 31-103 2-88 (235)
448 4eye_A Probable oxidoreductase 85.2 1.5 5E-05 35.8 5.7 48 24-71 153-203 (342)
449 2zig_A TTHA0409, putative modi 85.2 0.32 1.1E-05 39.1 1.6 30 79-108 20-53 (297)
450 1xkq_A Short-chain reductase f 84.8 4.5 0.00015 31.7 8.3 74 30-103 5-94 (280)
451 3e03_A Short chain dehydrogena 84.8 2.2 7.7E-05 33.4 6.5 72 30-103 5-98 (274)
452 4eez_A Alcohol dehydrogenase 1 84.7 3.2 0.00011 33.7 7.6 49 23-71 156-207 (348)
453 3ek2_A Enoyl-(acyl-carrier-pro 84.7 2.4 8.1E-05 32.9 6.6 72 29-103 12-100 (271)
454 3ip1_A Alcohol dehydrogenase, 84.7 1.9 6.5E-05 36.0 6.3 45 27-71 210-257 (404)
455 3s55_A Putative short-chain de 84.7 5.8 0.0002 31.0 8.9 72 30-103 9-107 (281)
456 1y1p_A ARII, aldehyde reductas 84.7 7.5 0.00026 30.9 9.8 72 30-103 10-91 (342)
457 2zat_A Dehydrogenase/reductase 84.5 5 0.00017 30.9 8.4 72 30-103 13-99 (260)
458 3ppi_A 3-hydroxyacyl-COA dehyd 84.5 4 0.00014 32.0 7.8 68 30-102 29-110 (281)
459 2nwq_A Probable short-chain de 84.4 4.8 0.00016 31.5 8.3 69 32-103 22-105 (272)
460 1cyd_A Carbonyl reductase; sho 84.3 5.2 0.00018 30.3 8.3 67 30-103 6-84 (244)
461 3qwb_A Probable quinone oxidor 84.2 2 6.9E-05 34.7 6.1 45 26-70 144-191 (334)
462 3rih_A Short chain dehydrogena 84.1 3 0.0001 33.2 7.0 73 30-103 40-127 (293)
463 4g65_A TRK system potassium up 84.0 1.6 5.3E-05 37.5 5.5 83 14-102 216-307 (461)
464 4eue_A Putative reductase CA_C 84.0 5.7 0.00019 33.6 8.9 74 28-103 57-159 (418)
465 3vyw_A MNMC2; tRNA wobble urid 83.9 2.8 9.5E-05 33.9 6.6 73 31-103 97-194 (308)
466 3d3w_A L-xylulose reductase; u 83.9 5.5 0.00019 30.2 8.3 68 30-103 6-84 (244)
467 4gkb_A 3-oxoacyl-[acyl-carrier 83.8 2.2 7.6E-05 33.5 6.0 71 30-103 6-91 (258)
468 3ijr_A Oxidoreductase, short c 83.6 5.7 0.0002 31.4 8.5 72 30-103 46-133 (291)
469 2gdz_A NAD+-dependent 15-hydro 83.5 6.7 0.00023 30.3 8.7 75 30-104 6-95 (267)
470 4dmm_A 3-oxoacyl-[acyl-carrier 83.4 5.5 0.00019 31.1 8.2 72 30-103 27-114 (269)
471 2ew8_A (S)-1-phenylethanol deh 83.4 4 0.00014 31.4 7.3 69 30-103 6-90 (249)
472 1vl8_A Gluconate 5-dehydrogena 83.4 6.9 0.00024 30.4 8.8 73 30-104 20-108 (267)
473 2uvd_A 3-oxoacyl-(acyl-carrier 83.4 5.7 0.0002 30.3 8.2 71 31-103 4-90 (246)
474 1wly_A CAAR, 2-haloacrylate re 83.3 3.2 0.00011 33.5 7.0 46 25-70 140-188 (333)
475 3l6e_A Oxidoreductase, short-c 83.2 7.2 0.00025 29.7 8.6 69 31-104 3-86 (235)
476 3asu_A Short-chain dehydrogena 83.1 6 0.00021 30.4 8.2 66 33-103 2-82 (248)
477 3edm_A Short chain dehydrogena 83.1 4.6 0.00016 31.3 7.6 72 30-103 7-94 (259)
478 4dup_A Quinone oxidoreductase; 83.1 2.1 7.2E-05 35.0 5.8 48 24-71 161-211 (353)
479 1iz0_A Quinone oxidoreductase; 83.1 1.6 5.5E-05 34.8 5.0 43 28-70 123-168 (302)
480 1qor_A Quinone oxidoreductase; 83.1 2.2 7.4E-05 34.4 5.8 46 25-70 135-183 (327)
481 1wma_A Carbonyl reductase [NAD 82.9 5.5 0.00019 30.6 8.0 71 30-103 3-90 (276)
482 2hmt_A YUAA protein; RCK, KTN, 82.5 0.95 3.2E-05 31.3 3.1 65 31-105 6-80 (144)
483 2cfc_A 2-(R)-hydroxypropyl-COM 82.5 7.3 0.00025 29.6 8.5 70 31-103 2-88 (250)
484 2j8z_A Quinone oxidoreductase; 82.5 2.4 8.1E-05 34.7 5.9 47 24-70 156-205 (354)
485 2g1u_A Hypothetical protein TM 82.5 2.4 8.2E-05 30.1 5.3 68 29-105 17-94 (155)
486 3oid_A Enoyl-[acyl-carrier-pro 82.4 5.6 0.00019 30.8 7.8 72 30-103 3-90 (258)
487 4dcm_A Ribosomal RNA large sub 82.4 4.1 0.00014 33.8 7.4 85 30-118 38-125 (375)
488 2gn4_A FLAA1 protein, UDP-GLCN 82.3 5.1 0.00017 32.5 7.8 70 30-104 20-100 (344)
489 3nrc_A Enoyl-[acyl-carrier-pro 82.3 4 0.00014 32.0 7.0 72 29-104 24-112 (280)
490 3kvo_A Hydroxysteroid dehydrog 82.3 3.1 0.00011 34.0 6.5 72 30-103 44-137 (346)
491 1gee_A Glucose 1-dehydrogenase 82.2 6.6 0.00023 30.1 8.2 71 30-103 6-93 (261)
492 1yxm_A Pecra, peroxisomal tran 82.1 8.3 0.00028 30.4 8.9 73 30-103 17-108 (303)
493 3e8x_A Putative NAD-dependent 82.1 6.4 0.00022 29.7 8.0 67 30-105 20-94 (236)
494 3n74_A 3-ketoacyl-(acyl-carrie 82.1 7.2 0.00025 30.0 8.4 69 30-103 8-91 (261)
495 3a28_C L-2.3-butanediol dehydr 82.1 6.2 0.00021 30.4 8.0 71 31-103 2-89 (258)
496 1xhl_A Short-chain dehydrogena 82.0 6.6 0.00023 31.1 8.3 74 30-103 25-114 (297)
497 1ja9_A 4HNR, 1,3,6,8-tetrahydr 81.8 6.9 0.00023 30.2 8.2 71 30-103 20-107 (274)
498 2c07_A 3-oxoacyl-(acyl-carrier 81.7 7.5 0.00026 30.4 8.5 70 31-103 44-129 (285)
499 3afn_B Carbonyl reductase; alp 81.4 4.5 0.00015 30.9 6.9 72 30-104 6-94 (258)
500 3uf0_A Short-chain dehydrogena 81.4 6.9 0.00023 30.6 8.1 71 30-103 30-114 (273)
No 1
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=100.00 E-value=1.9e-50 Score=325.16 Aligned_cols=213 Identities=33% Similarity=0.569 Sum_probs=191.2
Q ss_pred ccccCCCcccccCCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccE
Q 047897 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRL 81 (232)
Q Consensus 2 ~~~~k~~gq~fl~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~ 81 (232)
++++|++||||++|+.+++.|++.+++.++++|||||||+|.+|..+++.+.+|+|+|+|+++++.+++++... +++
T Consensus 1 ~~~~k~~GQnFL~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~~---~~v 77 (255)
T 3tqs_A 1 MPMRKRFGQHFLHDSFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQQ---KNI 77 (255)
T ss_dssp --------CCEECCHHHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTTC---TTE
T ss_pred CCCCCcCCcccccCHHHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhhC---CCc
Confidence 57899999999999999999999999999999999999999999999998899999999999999999998652 589
Q ss_pred EEEEcCCCCCCCC------CcceeecccCcccchHHHHHHhcCCCCccceEehhHHHHHHHHhcCCCCCcccchhheeee
Q 047897 82 NVISKDALKTEFP------QFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKL 155 (232)
Q Consensus 82 ~~~~~D~~~~~~~------~~D~Vi~n~p~~~~~~~l~~~~~~~~~~~~~~~~~q~e~~~rl~~~~g~~~~~~~~~~~~~ 155 (232)
+++++|+++++++ ++| |++|+||+++++++.+++.....+..+++|+|+|+|+|+++.||++.|+.+|+.+|+
T Consensus 78 ~~i~~D~~~~~~~~~~~~~~~~-vv~NlPY~is~~il~~ll~~~~~~~~~~lm~QkEva~Rl~a~pg~k~yg~lsv~~q~ 156 (255)
T 3tqs_A 78 TIYQNDALQFDFSSVKTDKPLR-VVGNLPYNISTPLLFHLFSQIHCIEDMHFMLQKEVVRRITAEVGSHDYGRLSVMAQY 156 (255)
T ss_dssp EEEESCTTTCCGGGSCCSSCEE-EEEECCHHHHHHHHHHHHHTGGGEEEEEEEEEHHHHHHHTCCTTSTTCSHHHHHHHH
T ss_pred EEEEcchHhCCHHHhccCCCeE-EEecCCcccCHHHHHHHHhCCCChheEEEEEeHHHHHHhhCCCCCCccchhhheeee
Confidence 9999999998763 356 999999999999999999987788899999999999999999999999999999999
Q ss_pred eeeeEEEEEecCCCcccCCCccEEEEEEEeC-CCCC-CCCHHHHHHHHHHhhcCCCchHHhhcCC
Q 047897 156 VADVEFVMDVSKRDFLPCPKVDSSVVIIRPK-AEIP-DVNLDEWRAFTRTCFSKKNKTLGATFKQ 218 (232)
Q Consensus 156 ~~~~~~~~~~~~~~f~P~p~v~s~~~~~~~~-~~~~-~~~~~~~~~~~~~~f~~rrk~l~~~~~~ 218 (232)
+++++.++++|++.|.|+|+|+|+|+++.++ +..+ ..+.+.|..+++.+|.+|||+|+|+|+.
T Consensus 157 ~~~~~~~~~v~~~~F~P~PkVdSavv~l~~~~~~~~~~~~~~~~~~~v~~~F~~rrK~l~~~L~~ 221 (255)
T 3tqs_A 157 FCDNTYLFTVSPQAFTPPPRVESAIIRLIPRHNFTPVAKNLDQLSHVVKEAFSYRRKTVGNALKK 221 (255)
T ss_dssp HEEEEEEEEECGGGEESCCSSCEEEEEEEECCSCSSCCSCHHHHHHHHHHHHHSTTSCHHHHTTT
T ss_pred eEEEEEEEEEChHHccCCCCCeEEEEEEEECCCCCCccccHHHHHHHHHHHHHccChHHHHHHhh
Confidence 9999999999999999999999999999998 4432 5678899999999999999999999875
No 2
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=100.00 E-value=7.3e-50 Score=323.85 Aligned_cols=218 Identities=34% Similarity=0.472 Sum_probs=201.0
Q ss_pred ccccCCCcccccCCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccE
Q 047897 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRL 81 (232)
Q Consensus 2 ~~~~k~~gq~fl~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~ 81 (232)
++++|++||||++|+.+++.|++.+++.++ +|||||||+|.+|..+++.+.+|+|+|+|+++++.+++++.. +++
T Consensus 19 ~~~~k~~GQnfL~d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~~~----~~v 93 (271)
T 3fut_A 19 LFADKRFGQNFLVSEAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLSG----LPV 93 (271)
T ss_dssp CCCSTTSSCCEECCHHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTTT----SSE
T ss_pred CCccccCCccccCCHHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCC----CCE
Confidence 578999999999999999999999999989 999999999999999999889999999999999999999863 579
Q ss_pred EEEEcCCCCCCCC---CcceeecccCcccchHHHHHHhcCCCCccceEehhHHHHHHHHhcCCCCCcccchhheeeeeee
Q 047897 82 NVISKDALKTEFP---QFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVAD 158 (232)
Q Consensus 82 ~~~~~D~~~~~~~---~~D~Vi~n~p~~~~~~~l~~~~~~~~~~~~~~~~~q~e~~~rl~~~~g~~~~~~~~~~~~~~~~ 158 (232)
+++++|+++++++ .+|.|++|+||+++++++.+++.. ..+..+++|+|+|+|+|+++.||++.|+.+++.+|++++
T Consensus 94 ~vi~~D~l~~~~~~~~~~~~iv~NlPy~iss~il~~ll~~-~~~~~~~lm~QkEva~Rl~A~pg~k~yg~lSv~~q~~~~ 172 (271)
T 3fut_A 94 RLVFQDALLYPWEEVPQGSLLVANLPYHIATPLVTRLLKT-GRFARLVFLVQKEVAERMTARPKTPAYGVLTLRVAHHAV 172 (271)
T ss_dssp EEEESCGGGSCGGGSCTTEEEEEEECSSCCHHHHHHHHHH-CCEEEEEEEEEHHHHHHHTCCTTSTTCSHHHHHHHHHEE
T ss_pred EEEECChhhCChhhccCccEEEecCcccccHHHHHHHhcC-CCCCEEEEEeeeeeeeecccCCCCCcccHHHHHHHHHee
Confidence 9999999998765 689999999999999999999987 778899999999999999999999999999999999999
Q ss_pred eEEEEEecCCCcccCCCccEEEEEEEeCCCCCCCCHHHHHHHHHHhhcCCCchHHhhcCC----hHHHHHHHHh
Q 047897 159 VEFVMDVSKRDFLPCPKVDSSVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ----KKKVIELLRL 228 (232)
Q Consensus 159 ~~~~~~~~~~~f~P~p~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~f~~rrk~l~~~~~~----~~~~~~~~~~ 228 (232)
++.++++|++.|.|+|+|+|+|+++.+++... .+.|..+++.+|.+|||+|+|+|+. .+.+.+.|..
T Consensus 173 ~~~~~~v~~~~F~P~PkVdSavv~l~p~~~~~---~~~~~~~v~~~F~~rrKtL~n~L~~~~~~~~~~~~~l~~ 243 (271)
T 3fut_A 173 AERLFDLPPGAFFPPPKVWSSLVRLTPTGALD---DPGLFRLVEAAFGKRRKTLLNALAAAGYPKARVEEALRA 243 (271)
T ss_dssp EEEEEEECGGGEESCCSSCEEEEEEEECSCCC---CHHHHHHHHHHTSSTTSCHHHHHHHTTCCHHHHHHHHHH
T ss_pred EEEEEEEChHHeECCCCCcEEEEEEEECCCCc---HHHHHHHHHHHHhcCCcHHHHHHHhhcCCHHHHHHHHHH
Confidence 99999999999999999999999999987543 4789999999999999999998863 4556666654
No 3
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=100.00 E-value=1e-48 Score=318.75 Aligned_cols=212 Identities=32% Similarity=0.493 Sum_probs=192.9
Q ss_pred ccccCCCcccccCCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCe----EEEEEcCHHHHHHHHHHHhhcCC
Q 047897 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKK----VHAIEIDERMVEILNRRAADSGF 77 (232)
Q Consensus 2 ~~~~k~~gq~fl~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~----v~~vD~~~~~~~~a~~~~~~~~~ 77 (232)
++++|++||||++|+.+++.|++.+++.++++|||||||+|.+|..+++.+.+ |+|+|+|+++++.++++.
T Consensus 14 ~~~~k~~GQ~fL~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~----- 88 (279)
T 3uzu_A 14 HFARKRFGQNFLVDHGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF----- 88 (279)
T ss_dssp ----CCCSCCEECCHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-----
T ss_pred CCccccCCccccCCHHHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-----
Confidence 46789999999999999999999999999999999999999999999996666 999999999999999994
Q ss_pred CccEEEEEcCCCCCCCCC--------cceeecccCcccchHHHHHHhcCCCCccceEehhHHHHHHHHhcCCCCCcccch
Q 047897 78 HDRLNVISKDALKTEFPQ--------FDLVVANIPYGISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRL 149 (232)
Q Consensus 78 ~~~~~~~~~D~~~~~~~~--------~D~Vi~n~p~~~~~~~l~~~~~~~~~~~~~~~~~q~e~~~rl~~~~g~~~~~~~ 149 (232)
.++++++++|+++++++. .+.|++|+||+++++++.+++.....+..+++|+|+|+|+|+++.||++.|+.+
T Consensus 89 ~~~v~~i~~D~~~~~~~~~~~~~~~~~~~vv~NlPY~iss~il~~ll~~~~~~~~~~~m~QkEva~Rl~A~pg~k~yg~l 168 (279)
T 3uzu_A 89 GELLELHAGDALTFDFGSIARPGDEPSLRIIGNLPYNISSPLLFHLMSFAPVVIDQHFMLQNEVVERMVAEPGTKAFSRL 168 (279)
T ss_dssp GGGEEEEESCGGGCCGGGGSCSSSSCCEEEEEECCHHHHHHHHHHHGGGGGGEEEEEEEEEHHHHHHHTCCTTSTTCCHH
T ss_pred CCCcEEEECChhcCChhHhcccccCCceEEEEccCccccHHHHHHHHhccCCccEEEEEeeHHHHHHHhCCCCCCcccHH
Confidence 168999999999987653 236999999999999999999988888999999999999999999999999999
Q ss_pred hheeeeeeeeEEEEEecCCCcccCCCccEEEEEEEeCCCC--CCCCHHHHHHHHHHhhcCCCchHHhhcCC
Q 047897 150 AVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAEI--PDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~f~P~p~v~s~~~~~~~~~~~--~~~~~~~~~~~~~~~f~~rrk~l~~~~~~ 218 (232)
++.+|++++++.++++|++.|.|+|+|+|+|+++.|++.. ...+.+.|..+++.+|.+|||+|+|+|+.
T Consensus 169 Sv~~q~~~~~~~~~~v~~~~F~P~PkVdSavv~l~p~~~~~~~~~~~~~~~~~v~~~F~~rrK~l~n~L~~ 239 (279)
T 3uzu_A 169 SVMLQYRYVMDKLIDVPPESFQPPPKVDSAIVRMIPHAPHELPAVDPAVLGEVVTAAFSQRRKMLRNTLGG 239 (279)
T ss_dssp HHHHHHHEEEEEEEEECGGGEESCCSSCEEEEEEEECCGGGSCSSCHHHHHHHHHHHGGGTTSBHHHHTGG
T ss_pred HHHHhhheEEEEEEEEChHHccCCCCCeEEEEEEEecCCCCCCcccHHHHHHHHHHHHhccChHHHHHHHh
Confidence 9999999999999999999999999999999999998753 35678899999999999999999998863
No 4
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=100.00 E-value=4.6e-47 Score=310.71 Aligned_cols=212 Identities=37% Similarity=0.541 Sum_probs=188.6
Q ss_pred ccccCCCcccccCCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccE
Q 047897 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRL 81 (232)
Q Consensus 2 ~~~~k~~gq~fl~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~ 81 (232)
++++|++||||++|+.+++.|++.+++.++++|||||||+|.+|..+++.+.+|+|+|+|+.+++.+++++... +++
T Consensus 22 ~~~~k~~GQnfL~d~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~~~---~~v 98 (295)
T 3gru_A 22 FKPKKKLGQCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKELY---NNI 98 (295)
T ss_dssp --------CCEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHHHC---SSE
T ss_pred CCCccccCccccCCHHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhccC---CCe
Confidence 57899999999999999999999999999999999999999999999998899999999999999999998732 579
Q ss_pred EEEEcCCCCCCCC--CcceeecccCcccchHHHHHHhcCCCCccceEehhHHHHHHHHhcCCCCCcccchhheeeeeeee
Q 047897 82 NVISKDALKTEFP--QFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADV 159 (232)
Q Consensus 82 ~~~~~D~~~~~~~--~~D~Vi~n~p~~~~~~~l~~~~~~~~~~~~~~~~~q~e~~~rl~~~~g~~~~~~~~~~~~~~~~~ 159 (232)
+++++|+++.+++ .||.|++|+||+++++++.+++.. .+..+.+++|+|++.|+++.||++.|+.+++.++++++.
T Consensus 99 ~vi~gD~l~~~~~~~~fD~Iv~NlPy~is~pil~~lL~~--~~~~~~lm~Q~eva~Rl~a~pg~k~yg~Lsv~~q~~~~~ 176 (295)
T 3gru_A 99 EIIWGDALKVDLNKLDFNKVVANLPYQISSPITFKLIKR--GFDLAVLMYQYEFAKRMVAAAGTKDYGRLSVAVQSRADV 176 (295)
T ss_dssp EEEESCTTTSCGGGSCCSEEEEECCGGGHHHHHHHHHHH--CCSEEEEEEEHHHHHHHHCCTTSTTCSHHHHHHHTTEEE
T ss_pred EEEECchhhCCcccCCccEEEEeCcccccHHHHHHHHhc--ccceEEEeeecccccEEEecCCCcchhHHHHHHHhhccE
Confidence 9999999998765 599999999999999999999974 467789999999999999999999999999999999999
Q ss_pred EEEEEecCCCcccCCCccEEEEEEEeCCCC-CCCCHHHHHHHHHHhhcCCCchHHhhcCC
Q 047897 160 EFVMDVSKRDFLPCPKVDSSVVIIRPKAEI-PDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218 (232)
Q Consensus 160 ~~~~~~~~~~f~P~p~v~s~~~~~~~~~~~-~~~~~~~~~~~~~~~f~~rrk~l~~~~~~ 218 (232)
+.+++++++.|.|+|+|+|+++.+.+++.. ...+.+.|..+++.+|.+|||+|+|+|+.
T Consensus 177 ~~~~~v~~~~F~P~PkVdSavv~l~~~~~~~~~~~~~~~~~~v~~~F~~rrK~l~n~L~~ 236 (295)
T 3gru_A 177 EIVAKVPPSAFYPKPKVYSAIVKIKPNKGKYHIENENFFDDFLRAIFQHRNKSVRKALID 236 (295)
T ss_dssp EEEEEECGGGEESCCSSCEEEEEEEECHHHHCCSCHHHHHHHHHHHHTTTTSBHHHHHHH
T ss_pred EEEEEECcccCCCcCCCeEEEEEEEcCCCCCCcccHHHHHHHHHHHHccCchHHHHHHhh
Confidence 999999999999999999999999998422 23467889999999999999999999863
No 5
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=100.00 E-value=1.2e-45 Score=296.70 Aligned_cols=209 Identities=36% Similarity=0.540 Sum_probs=187.9
Q ss_pred ccccCCCcccccCCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc-CCeEEEEEcCHHHHHHHHHHHhhcCCCcc
Q 047897 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV-SKKVHAIEIDERMVEILNRRAADSGFHDR 80 (232)
Q Consensus 2 ~~~~k~~gq~fl~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ 80 (232)
++++|++||||++|+.+++.|++.+++.++++|||||||+|.+|..+++. ..+|+|+|+|+.+++.++++ . ..+
T Consensus 3 ~~~~k~~GQnfl~d~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~-~----~~~ 77 (249)
T 3ftd_A 3 VRLKKSFGQHLLVSEGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI-G----DER 77 (249)
T ss_dssp -----CCCSSCEECHHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS-C----CTT
T ss_pred CCCCCcccccccCCHHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc-c----CCC
Confidence 47899999999999999999999999989999999999999999999997 48999999999999999887 2 157
Q ss_pred EEEEEcCCCCCCCCC---cceeecccCcccchHHHHHHhcCCCCccceEehhHHHHHHHHhcCCCCCcccchhheeeeee
Q 047897 81 LNVISKDALKTEFPQ---FDLVVANIPYGISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVA 157 (232)
Q Consensus 81 ~~~~~~D~~~~~~~~---~D~Vi~n~p~~~~~~~l~~~~~~~~~~~~~~~~~q~e~~~rl~~~~g~~~~~~~~~~~~~~~ 157 (232)
++++++|+++++++. ...|++|+||+++++++.+++.....+..+++|+|+|+++|+++ ++.|+.+++.++.++
T Consensus 78 v~~i~~D~~~~~~~~~~~~~~vv~NlPy~i~~~il~~ll~~~~~~~~~~~m~Qkeva~Rl~a---~k~yg~lsv~~q~~~ 154 (249)
T 3ftd_A 78 LEVINEDASKFPFCSLGKELKVVGNLPYNVASLIIENTVYNKDCVPLAVFMVQKEVAEKLQG---KKDTGWLSVFVRTFY 154 (249)
T ss_dssp EEEECSCTTTCCGGGSCSSEEEEEECCTTTHHHHHHHHHHTGGGCSEEEEEEEHHHHHHHHT---SSCCCHHHHHHHHHE
T ss_pred eEEEEcchhhCChhHccCCcEEEEECchhccHHHHHHHHhcCCCCceEEEEEeHHHHHHhhc---cccccHHHHHHHhHE
Confidence 999999999987653 34899999999999999999998878899999999999999988 899999999999999
Q ss_pred eeEEEEEecCCCcccCCCccEEEEEEEeCCCCCCCCHHHHHHHHHHhhcCCCchHHhhcCC
Q 047897 158 DVEFVMDVSKRDFLPCPKVDSSVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218 (232)
Q Consensus 158 ~~~~~~~~~~~~f~P~p~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~f~~rrk~l~~~~~~ 218 (232)
+++.++++|++.|.|+|+|+|+++.+.+++.......+.|..+++.+|.+|||+|+|+|+.
T Consensus 155 ~~~~~~~v~~~~F~P~PkV~savv~l~~~~~~~~~~~~~~~~~v~~~F~~rrk~l~~~l~~ 215 (249)
T 3ftd_A 155 DVNYVMTVPPRFFVPPPKVQSAVIKLVKNEKFPVKDLKNYKKFLTKIFQNRRKVLRKKIPE 215 (249)
T ss_dssp EEEEEEEECGGGEESCCSSCEEEEEEEECCCSCCCCHHHHHHHHHHHHSSTTSCGGGTSCH
T ss_pred EEEEEEEEChHHccCCCCCeEEEEEEEECCCCCcchHHHHHHHHHHHHhCcChhHHHHHHH
Confidence 9999999999999999999999999999876543347889999999999999999999864
No 6
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=100.00 E-value=4.9e-45 Score=293.30 Aligned_cols=204 Identities=31% Similarity=0.471 Sum_probs=186.5
Q ss_pred ccccCCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCe--EEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcC
Q 047897 10 QHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKK--VHAIEIDERMVEILNRRAADSGFHDRLNVISKD 87 (232)
Q Consensus 10 q~fl~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~--v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D 87 (232)
|||++|+.+++.|++.+++.++++|||||||+|.+|. +.. +.+ |+|+|+|+.+++.+++++... ++++++++|
T Consensus 1 QnfL~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~~~~~~a~~~~~~~---~~v~~i~~D 75 (252)
T 1qyr_A 1 QNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTE-PVG-ERLDQLTVIELDRDLAARLQTHPFLG---PKLTIYQQD 75 (252)
T ss_dssp CCEECCHHHHHHHHHHHCCCTTCCEEEECCTTTTTHH-HHH-TTCSCEEEECCCHHHHHHHHTCTTTG---GGEEEECSC
T ss_pred CCCcCCHHHHHHHHHhcCCCCcCEEEEECCCCcHHHH-hhh-CCCCeEEEEECCHHHHHHHHHHhccC---CceEEEECc
Confidence 8999999999999999999899999999999999999 654 567 999999999999999987543 589999999
Q ss_pred CCCCCCC-------CcceeecccCcccchHHHHHHhcCCCCccceEehhHHHHHHHHhcCCCCCcccchhheeeeeeeeE
Q 047897 88 ALKTEFP-------QFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVE 160 (232)
Q Consensus 88 ~~~~~~~-------~~D~Vi~n~p~~~~~~~l~~~~~~~~~~~~~~~~~q~e~~~rl~~~~g~~~~~~~~~~~~~~~~~~ 160 (232)
+++++++ ..|.|++|+||+++++++.+++.....+..+++|+|+|+++|++++||++.|+.+++.++++++++
T Consensus 76 ~~~~~~~~~~~~~~~~~~vvsNlPY~i~~~il~~ll~~~~~~~~~~~m~QkEva~Rl~a~pG~k~yg~lsv~~q~~~~~~ 155 (252)
T 1qyr_A 76 AMTFNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVI 155 (252)
T ss_dssp GGGCCHHHHHHHHTSCEEEEEECCTTTHHHHHHHHHTTGGGEEEEEEEEEHHHHHHHHCCTTSTTCSHHHHHHHHHEEEE
T ss_pred hhhCCHHHhhcccCCceEEEECCCCCccHHHHHHHHhcCCCcceEEEEEeHHHHHHhcCCCCCccccHHHHHHHHHheEE
Confidence 9998754 236899999999999999999988777889999999999999999999999999999999999999
Q ss_pred EEEEecCCCcccCCCccEEEEEEEeCCCC-CC-CCHHHHHHHHHHhhcCCCchHHhhcCC
Q 047897 161 FVMDVSKRDFLPCPKVDSSVVIIRPKAEI-PD-VNLDEWRAFTRTCFSKKNKTLGATFKQ 218 (232)
Q Consensus 161 ~~~~~~~~~f~P~p~v~s~~~~~~~~~~~-~~-~~~~~~~~~~~~~f~~rrk~l~~~~~~ 218 (232)
.++.+|++.|.|+|+|+|+++.+.+++.. .. .+.+.|..+++.+|++|||+|+|+|+.
T Consensus 156 ~~~~v~~~~F~P~PkV~Savv~l~~~~~~~~~~~~~~~~~~~v~~~F~~rrK~l~n~l~~ 215 (252)
T 1qyr_A 156 PVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNSLGN 215 (252)
T ss_dssp EEEEECGGGEESCCSSCEEEEEEEECSSCSSCCSCHHHHHHHHHHHHHTTTSBHHHHTTT
T ss_pred EEEEEChHHccCCCCceEEEEEEEEcCcCCCCccCHHHHHHHHHHHHHhCCcHHHHHHhh
Confidence 99999999999999999999999998753 22 577889999999999999999999975
No 7
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=100.00 E-value=3.4e-43 Score=288.11 Aligned_cols=215 Identities=49% Similarity=0.791 Sum_probs=196.6
Q ss_pred ccCCCcccccCCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEE
Q 047897 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNV 83 (232)
Q Consensus 4 ~~k~~gq~fl~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~ 83 (232)
.+|++||||++|+.+++.+++.+++.++++|||||||+|.+|..+++.+.+|+|+|+|+.+++.+++++...+..+++++
T Consensus 2 ~~k~~gq~fl~d~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~ 81 (285)
T 1zq9_A 2 SNTGIGQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVASKLQV 81 (285)
T ss_dssp ------CCEECCHHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHTTSTTGGGEEE
T ss_pred CCCCCCcCccCCHHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHHHhcCCCCceEE
Confidence 47899999999999999999999998999999999999999999999888999999999999999999876665468999
Q ss_pred EEcCCCCCCCCCcceeecccCcccchHHHHHHhcCCCCccceEehhHHHHHHHHhcCCCCCcccchhheeeeeeeeEEEE
Q 047897 84 ISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVM 163 (232)
Q Consensus 84 ~~~D~~~~~~~~~D~Vi~n~p~~~~~~~l~~~~~~~~~~~~~~~~~q~e~~~rl~~~~g~~~~~~~~~~~~~~~~~~~~~ 163 (232)
+++|+++.+.+.||.|++|+||+++++++.+++.+......+.+++|+|+++|++.+||+..|+.+++..+++++++.++
T Consensus 82 ~~~D~~~~~~~~fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y~~lsv~~~~~~~~~~~~ 161 (285)
T 1zq9_A 82 LVGDVLKTDLPFFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLM 161 (285)
T ss_dssp EESCTTTSCCCCCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTCSHHHHHHHHHEEEEEEE
T ss_pred EEcceecccchhhcEEEEecCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCcccchhhhhhhhhhheeeeE
Confidence 99999998888999999999999999999999998888899999999999999999999999999999999999999999
Q ss_pred EecCCCcccCCCccEEEEEEEeCCCCCCCCHHHHHHHHHHhhcCCCchHHhhcCC
Q 047897 164 DVSKRDFLPCPKVDSSVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218 (232)
Q Consensus 164 ~~~~~~f~P~p~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~f~~rrk~l~~~~~~ 218 (232)
.++++.|.|+|+|+|+++.+.++......+.+.|..+++.+|.+|||+|+|+|+.
T Consensus 162 ~v~~~~F~P~p~v~savv~~~~~~~~~~~~~~~~~~~~~~~F~~rrK~l~~~l~~ 216 (285)
T 1zq9_A 162 KVGKNNFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKS 216 (285)
T ss_dssp EECGGGEESCCSSCEEEEEEEECSSCCSCCHHHHHHHHHHHHTTTTSBHHHHTTS
T ss_pred EEChhhCCCCCCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHhcchhHHHHHhch
Confidence 9999999999999999999999876555677889999999999999999999975
No 8
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=100.00 E-value=7.9e-42 Score=281.71 Aligned_cols=216 Identities=48% Similarity=0.747 Sum_probs=190.6
Q ss_pred cccCCCcccccCCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEE
Q 047897 3 FFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLN 82 (232)
Q Consensus 3 ~~~k~~gq~fl~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~ 82 (232)
+++|.+||||++++.+++.+++.+++.++++|||||||+|.+|..+++.+.+|+|+|+|+.+++.+++++...+. ++++
T Consensus 15 ~~~k~~Gq~fl~~~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~~~~~-~~v~ 93 (299)
T 2h1r_A 15 ENLYFQGQHLLKNPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCLYEGY-NNLE 93 (299)
T ss_dssp --------CEECCHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHHHTTC-CCEE
T ss_pred cchhccccceecCHHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCC-CceE
Confidence 468999999999999999999999988999999999999999999999888999999999999999999977666 5899
Q ss_pred EEEcCCCCCCCCCcceeecccCcccchHHHHHHhcCCCCccceEehhHHHHHHHHhcCCCCCcccchhheeeeeeeeEEE
Q 047897 83 VISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFV 162 (232)
Q Consensus 83 ~~~~D~~~~~~~~~D~Vi~n~p~~~~~~~l~~~~~~~~~~~~~~~~~q~e~~~rl~~~~g~~~~~~~~~~~~~~~~~~~~ 162 (232)
++++|+++.+.++||+|++|+||++.++++.+++.+......+.+++|+|.+.|++++||+..|+.+++.++.+++++.+
T Consensus 94 ~~~~D~~~~~~~~~D~Vv~n~py~~~~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G~~~y~~ls~~~~~~~~~~~~ 173 (299)
T 2h1r_A 94 VYEGDAIKTVFPKFDVCTANIPYKISSPLIFKLISHRPLFKCAVLMFQKEFAERMLANVGDSNYSRLTINVKLFCKVTKV 173 (299)
T ss_dssp C----CCSSCCCCCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTTSTTCCHHHHHHHHHEEEEEE
T ss_pred EEECchhhCCcccCCEEEEcCCcccccHHHHHHHhcCCccceeeehHHHHHHHHHhcCCCCcchhHHHHHHHHhhceEEE
Confidence 99999999988899999999999999999999998888888899999999999999999999999999999999999999
Q ss_pred EEecCCCcccCCCccEEEEEEEeCCCCCCCCHHHHHHHHHHhhcCCCchHHhhcCCh
Q 047897 163 MDVSKRDFLPCPKVDSSVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQK 219 (232)
Q Consensus 163 ~~~~~~~f~P~p~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~f~~rrk~l~~~~~~~ 219 (232)
..++++.|.|+|+|+|+++.+.++......+.+.|..+++.+|.+|||+|+|.|+..
T Consensus 174 ~~v~~~~F~p~p~V~s~vv~~~~~~~~~~~~~~~~~~~v~~~F~~rrKtl~~~l~~~ 230 (299)
T 2h1r_A 174 CNVNRSSFNPPPKVDSVIVKLIPKESSFLTNFDEWDNLLRICFSRKRKTLHAIFKRN 230 (299)
T ss_dssp EEECGGGEESCCSSCEEEEEEEECGGGGGSCHHHHHHHHHHHHTTTTSBHHHHHTSH
T ss_pred EEECchhcCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHhhcchHHHHHhhhh
Confidence 999999999999999999999987654346788899999999999999999999753
No 9
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=100.00 E-value=2.2e-42 Score=288.19 Aligned_cols=210 Identities=20% Similarity=0.249 Sum_probs=187.0
Q ss_pred cccCCCcccccCCHHHHHHHHHhcCCCC------CCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhh
Q 047897 3 FFHKSKGQHILTNQRVLDSIVRKSSINP------DDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAAD 74 (232)
Q Consensus 3 ~~~k~~gq~fl~~~~~~~~i~~~~~~~~------~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~ 74 (232)
+++|++|||||+|++++++|++.+++.+ ++.|||||+|.|.+|..|++. +.+|+++|+|+.+++.+++.+ .
T Consensus 25 ~~kk~lGQnFL~d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~ 103 (353)
T 1i4w_A 25 KLKFFYGFKYLWNPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E 103 (353)
T ss_dssp SSCCGGGCCCBCCHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T
T ss_pred CCCCCCCcCccCCHHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c
Confidence 5789999999999999999999998764 589999999999999999984 679999999999999999887 2
Q ss_pred cCCCccEEEEEcCCCCCC-C----CC-------------c---ceeecccCcccchHHHHHHhcCC--------CCccce
Q 047897 75 SGFHDRLNVISKDALKTE-F----PQ-------------F---DLVVANIPYGISSPLVAKLVYGT--------KSFRSA 125 (232)
Q Consensus 75 ~~~~~~~~~~~~D~~~~~-~----~~-------------~---D~Vi~n~p~~~~~~~l~~~~~~~--------~~~~~~ 125 (232)
. ++++++++|+++++ + .. + -.|++|+||+++++++.+++... .....+
T Consensus 104 --~-~~l~ii~~D~l~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~vvaNLPYnIstpil~~ll~~~~~~~~l~~~~~~~m 180 (353)
T 1i4w_A 104 --G-SPLQILKRDPYDWSTYSNLIDEERIFVPEVQSSDHINDKFLTVANVTGEGSEGLIMQWLSCIGNKNWLYRFGKVKM 180 (353)
T ss_dssp --T-SSCEEECSCTTCHHHHHHHTTTTCSSCCCCCCTTSEEEEEEEEEECCSTTHHHHHHHHHHHHHHTCGGGGGSEEEE
T ss_pred --C-CCEEEEECCccchhhHHHhhcccccccccccccccCCCceEEEEECCCchHHHHHHHHHHhccccccccccCcceE
Confidence 1 68999999998764 1 11 0 17999999999999999988632 245688
Q ss_pred EehhHHHHHHHHhcCCCCCcccchhheeeeeeeeEEEEEec---CCCcccCC----------Cc--------cEEEEEEE
Q 047897 126 TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVS---KRDFLPCP----------KV--------DSSVVIIR 184 (232)
Q Consensus 126 ~~~~q~e~~~rl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~f~P~p----------~v--------~s~~~~~~ 184 (232)
++|+|+|+|+|++++||++.|+++++.+|++++++.++.++ ++.|.|+| +| +|+|+++.
T Consensus 181 ~lmvQkEvA~Rl~A~PGsk~yg~LSV~~q~~~~v~~l~~v~~~~~~~F~P~P~~k~~p~~~PkV~~~~~~~~dSaVV~l~ 260 (353)
T 1i4w_A 181 LLWMPSTTARKLLARPGMHSRSKCSVVREAFTDTKLIAISDANELKGFDSQCIEEWDPILFSAAEIWPTKGKPIALVEMD 260 (353)
T ss_dssp EEEEEHHHHHHHHCCTTSTTCCHHHHHHHHHEEEEEEEESCGGGGGGSCHHHHHHHCCEECCGGGBSSCSCCCEEEEEEE
T ss_pred EEEeEHHHHHHhcCCCCCccccHHHHHHHHHcceEEEEecCCccCCCccCCCcccccccccCcccccCCCCCceEEEEEE
Confidence 99999999999999999999999999999999999999999 99999998 88 99999999
Q ss_pred eCCCCCCCCHHHHHHHHHHhhcCCCchHHhhcCC
Q 047897 185 PKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218 (232)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~f~~rrk~l~~~~~~ 218 (232)
|++. ..+.+.|..+++.+|.+|||+|+|+|+.
T Consensus 261 p~~~--~~~~~~~~~vvr~~F~qRRKtL~n~L~~ 292 (353)
T 1i4w_A 261 PIDF--DFDVDNWDYVTRHLMILKRTPLNTVMDS 292 (353)
T ss_dssp ECCC--CSCHHHHHHHHHHHHTTTTSCTTTGGGG
T ss_pred ECCC--cccHHHHHHHHHHHHhhchHHHHHHHHh
Confidence 9876 4677889999999999999999999974
No 10
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=100.00 E-value=4.2e-39 Score=258.27 Aligned_cols=206 Identities=28% Similarity=0.448 Sum_probs=176.5
Q ss_pred ccccCCCcccccCCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccE
Q 047897 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRL 81 (232)
Q Consensus 2 ~~~~k~~gq~fl~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~ 81 (232)
++++|++||||++|+.+++.+++.+++.++++|||||||+|.+|..+++.+.+|+|+|+|+.+++.+++++... +++
T Consensus 2 ~~~~k~~gQ~fl~d~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~---~~v 78 (244)
T 1qam_A 2 NEKNIKHSQNFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLVDH---DNF 78 (244)
T ss_dssp --------CCBCCCHHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTTTC---CSE
T ss_pred CCCCccCCccccCCHHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHHHhhccC---CCe
Confidence 57899999999999999999999999888999999999999999999998899999999999999999998642 579
Q ss_pred EEEEcCCCCCCCCC--cceeecccCcccchHHHHHHhcCCCCccceEehhHHHHHHHHhcCCCCCcccchhheeeeeeee
Q 047897 82 NVISKDALKTEFPQ--FDLVVANIPYGISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADV 159 (232)
Q Consensus 82 ~~~~~D~~~~~~~~--~D~Vi~n~p~~~~~~~l~~~~~~~~~~~~~~~~~q~e~~~rl~~~~g~~~~~~~~~~~~~~~~~ 159 (232)
+++++|+++++.+. ...|++|+||+++++++.+++.+ .....+.+++|+|.+.|++++|| .+++..+.+++.
T Consensus 79 ~~~~~D~~~~~~~~~~~~~vv~nlPy~~~~~~l~~~l~~-~~~~~~~lm~q~e~a~rll~~~G-----~l~v~~~~~~~~ 152 (244)
T 1qam_A 79 QVLNKDILQFKFPKNQSYKIFGNIPYNISTDIIRKIVFD-SIADEIYLIVEYGFAKRLLNTKR-----SLALFLMAEVDI 152 (244)
T ss_dssp EEECCCGGGCCCCSSCCCEEEEECCGGGHHHHHHHHHHS-CCCSEEEEEEEHHHHHHHTCTTS-----HHHHHHTTTEEE
T ss_pred EEEEChHHhCCcccCCCeEEEEeCCcccCHHHHHHHHhc-CCCCeEEEEEEHHHHHHHhcCCc-----chhHHhhhhEeE
Confidence 99999999987652 23699999999999999998876 45667888999999999998875 588889999999
Q ss_pred EEEEEecCCCcccCCCccEEEEEEEeCCCCC-CCCHHHHHHHHHHhhcCCCchHHhhc
Q 047897 160 EFVMDVSKRDFLPCPKVDSSVVIIRPKAEIP-DVNLDEWRAFTRTCFSKKNKTLGATF 216 (232)
Q Consensus 160 ~~~~~~~~~~f~P~p~v~s~~~~~~~~~~~~-~~~~~~~~~~~~~~f~~rrk~l~~~~ 216 (232)
+.+..++++.|.|+|+|+|+++.+.++.... ..+.+.|..+++.+|++|||+|.|.+
T Consensus 153 ~~~~~v~~~~F~P~p~v~s~vv~~~~~~~~~~~~~~~~~~~~v~~~F~~rrk~l~~~~ 210 (244)
T 1qam_A 153 SILSMVPREYFHPKPKVNSSLIRLNRKKSRISHKDKQKYNYFVMKWVNKEYKKIFTKN 210 (244)
T ss_dssp EEEEEECGGGSBSCCSSCEEEEEEEECCCSSCGGGHHHHHHHHHHHHTTCGGGTCCHH
T ss_pred EEEEEEChhhccCCCCceEEEEEEEECCCCCCcccHHHHHHHHHHHHhhccccccchH
Confidence 9999999999999999999999999865432 24567899999999999999999875
No 11
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=100.00 E-value=2e-35 Score=237.10 Aligned_cols=205 Identities=25% Similarity=0.443 Sum_probs=177.4
Q ss_pred ccccCCCcccccCCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccE
Q 047897 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRL 81 (232)
Q Consensus 2 ~~~~k~~gq~fl~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~ 81 (232)
++++|++||||++++.+++.+++.+++.++++|||||||+|.++..+++.+.+|+|+|+|+.+++.++++... .+++
T Consensus 1 ~~~~k~~gq~fl~~~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~~---~~~v 77 (245)
T 1yub_A 1 MNKNIKYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLKL---NTRV 77 (245)
T ss_dssp CCCCCCSCCCBCCCTTTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTTT---CSEE
T ss_pred CCCCcccCCCCCCCHHHHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhcc---CCce
Confidence 4789999999999999999999999988899999999999999999999889999999999999999888752 2589
Q ss_pred EEEEcCCCCCCCC---CcceeecccCcccchHHHHHHhcCCCCccceEehhHHHHHHHHhcCCCCCcccchhheeeeeee
Q 047897 82 NVISKDALKTEFP---QFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVAD 158 (232)
Q Consensus 82 ~~~~~D~~~~~~~---~~D~Vi~n~p~~~~~~~l~~~~~~~~~~~~~~~~~q~e~~~rl~~~~g~~~~~~~~~~~~~~~~ 158 (232)
+++++|+.+.+.+ +| .|++|+||+++++++.+++.+ .......+|+|.+.+.|+++++|. +++..+.+++
T Consensus 78 ~~~~~D~~~~~~~~~~~f-~vv~n~Py~~~~~~~~~~~~~-~~~~~~~lm~q~e~a~rll~~~G~-----l~v~~~~~~~ 150 (245)
T 1yub_A 78 TLIHQDILQFQFPNKQRY-KIVGNIPYHLSTQIIKKVVFE-SRASDIYLIVEEGFYKRTLDIHRT-----LGLLLHTQVS 150 (245)
T ss_dssp EECCSCCTTTTCCCSSEE-EEEEECCSSSCHHHHHHHHHH-CCCEEEEEEEESSHHHHHHCGGGS-----HHHHTTTTBC
T ss_pred EEEECChhhcCcccCCCc-EEEEeCCccccHHHHHHHHhC-CCCCeEEEEeeHHHHHHHhCCCCc-----hhhhheehee
Confidence 9999999998753 57 899999999999998888765 345667889999999999988753 7777778888
Q ss_pred eEEEEEecCCCcccCCCccEEEEEEEeCCCCCC-CCHHHHHHHHHHhhcCCCchHHhhc
Q 047897 159 VEFVMDVSKRDFLPCPKVDSSVVIIRPKAEIPD-VNLDEWRAFTRTCFSKKNKTLGATF 216 (232)
Q Consensus 159 ~~~~~~~~~~~f~P~p~v~s~~~~~~~~~~~~~-~~~~~~~~~~~~~f~~rrk~l~~~~ 216 (232)
.+.+..+++..|.|.|+|+++++++.+++.... .+...|...++.+|.+|||++.|.+
T Consensus 151 ~~~~~~v~~~~f~P~p~v~s~~v~~~~~~~~~~~~~~~~~~~~~~~~f~~rrk~l~~~~ 209 (245)
T 1yub_A 151 IQQLLKLPAECFHPKPKVNSVLIKLTRHTTDVPDKYWKLYTYFVSKWVNREYRQLFTKN 209 (245)
T ss_dssp CCEEEEECCTTSBSSCCSCEEEEEECBCSCSSCHHHHHHHHHHHHHHHHTCHHHHCSSS
T ss_pred EEEEEEECchhccCCCCceEEEEEEEECCCCCCcccHHHHHHHHHHHHhhcchhhhchH
Confidence 888999999999999999999999987443222 2345699999999999999999875
No 12
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.69 E-value=2.1e-16 Score=122.79 Aligned_cols=104 Identities=21% Similarity=0.263 Sum_probs=89.2
Q ss_pred ccccCCCcccccCCHHHHHHHHHhcC---CCCCCEEEEEcCCccHhHHHHHhcC-CeEEEEEcCHHHHHHHHHHHhhcCC
Q 047897 2 IFFHKSKGQHILTNQRVLDSIVRKSS---INPDDTVLEIGPGTGNLTLKLLEVS-KKVHAIEIDERMVEILNRRAADSGF 77 (232)
Q Consensus 2 ~~~~k~~gq~fl~~~~~~~~i~~~~~---~~~~~~vLDiG~G~G~~t~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~ 77 (232)
.+.++.+|| |.+++.+.+.++..+. ..++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.+++++...++
T Consensus 19 ~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~ 97 (207)
T 1wy7_A 19 KNPKVWLEQ-YRTPGNAASELLWLAYSLGDIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKG 97 (207)
T ss_dssp SSCCGGGTC-CCCCHHHHHHHHHHHHHTTSSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT
T ss_pred CCcccceee-ecCchHHHHHHHHHHHHcCCCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 356778888 8888999888876553 4578899999999999999999864 5799999999999999999988775
Q ss_pred CccEEEEEcCCCCCCCCCcceeecccCcccch
Q 047897 78 HDRLNVISKDALKTEFPQFDLVVANIPYGISS 109 (232)
Q Consensus 78 ~~~~~~~~~D~~~~~~~~~D~Vi~n~p~~~~~ 109 (232)
+++++++|+.+++ .+||+|++|+||+...
T Consensus 98 --~~~~~~~d~~~~~-~~~D~v~~~~p~~~~~ 126 (207)
T 1wy7_A 98 --KFKVFIGDVSEFN-SRVDIVIMNPPFGSQR 126 (207)
T ss_dssp --SEEEEESCGGGCC-CCCSEEEECCCCSSSS
T ss_pred --CEEEEECchHHcC-CCCCEEEEcCCCcccc
Confidence 6999999999975 4899999999998763
No 13
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.62 E-value=1.8e-15 Score=115.87 Aligned_cols=95 Identities=25% Similarity=0.355 Sum_probs=78.9
Q ss_pred CCHHHHHHHHHhcCC---CCCCEEEEEcCCccHhHHHHHhcC-CeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCC
Q 047897 14 TNQRVLDSIVRKSSI---NPDDTVLEIGPGTGNLTLKLLEVS-KKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDAL 89 (232)
Q Consensus 14 ~~~~~~~~i~~~~~~---~~~~~vLDiG~G~G~~t~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~ 89 (232)
+...+.+.+++.+.. .++.+|||+|||+|.++..++..+ .+|+|+|+|+.+++.+++++...++ ++++++++|+.
T Consensus 25 ~~~~~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~ 103 (189)
T 3p9n_A 25 TTDRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGL-SGATLRRGAVA 103 (189)
T ss_dssp -CHHHHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTC-SCEEEEESCHH
T ss_pred CcHHHHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCC-CceEEEEccHH
Confidence 446677777666532 478899999999999999887754 5899999999999999999998887 68999999998
Q ss_pred CCC----CCCcceeecccCcccch
Q 047897 90 KTE----FPQFDLVVANIPYGISS 109 (232)
Q Consensus 90 ~~~----~~~~D~Vi~n~p~~~~~ 109 (232)
+.. .++||+|++|+||+...
T Consensus 104 ~~~~~~~~~~fD~i~~~~p~~~~~ 127 (189)
T 3p9n_A 104 AVVAAGTTSPVDLVLADPPYNVDS 127 (189)
T ss_dssp HHHHHCCSSCCSEEEECCCTTSCH
T ss_pred HHHhhccCCCccEEEECCCCCcch
Confidence 753 35899999999998753
No 14
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.61 E-value=7.5e-15 Score=126.95 Aligned_cols=103 Identities=22% Similarity=0.366 Sum_probs=88.8
Q ss_pred cCCCcccccCCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc---------------CCeEEEEEcCHHHHHHHH
Q 047897 5 HKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV---------------SKKVHAIEIDERMVEILN 69 (232)
Q Consensus 5 ~k~~gq~fl~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~---------------~~~v~~vD~~~~~~~~a~ 69 (232)
++..|| |++++.+++.|++.+.+.++.+|||+|||+|.++..+++. ..+++|+|+++.+++.|+
T Consensus 147 ~~~~G~-fyTP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~ 225 (445)
T 2okc_A 147 KSGAGQ-YFTPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLAS 225 (445)
T ss_dssp TTCCGG-GCCCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHH
T ss_pred cccCCc-ccCcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHH
Confidence 456787 5688999999999998888899999999999999888762 368999999999999999
Q ss_pred HHHhhcCCCc-cEEEEEcCCCCCCCC-CcceeecccCcccc
Q 047897 70 RRAADSGFHD-RLNVISKDALKTEFP-QFDLVVANIPYGIS 108 (232)
Q Consensus 70 ~~~~~~~~~~-~~~~~~~D~~~~~~~-~~D~Vi~n~p~~~~ 108 (232)
.++..+|... +..++++|++..+.. .||+|++|+||+..
T Consensus 226 ~nl~l~g~~~~~~~i~~gD~l~~~~~~~fD~Iv~NPPf~~~ 266 (445)
T 2okc_A 226 MNLYLHGIGTDRSPIVCEDSLEKEPSTLVDVILANPPFGTR 266 (445)
T ss_dssp HHHHHTTCCSSCCSEEECCTTTSCCSSCEEEEEECCCSSCC
T ss_pred HHHHHhCCCcCCCCEeeCCCCCCcccCCcCEEEECCCCCCc
Confidence 9998887632 688999999987654 89999999999864
No 15
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.60 E-value=3.7e-15 Score=126.10 Aligned_cols=94 Identities=19% Similarity=0.316 Sum_probs=83.7
Q ss_pred CCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCC--eEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCC
Q 047897 14 TNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSK--KVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKT 91 (232)
Q Consensus 14 ~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~ 91 (232)
.++.+.+.++..+ +.++.+|||+|||+|.++..++..+. +|+|+|+|+.+++.|++++...|+.++++++++|+.++
T Consensus 202 l~~~la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~ 280 (373)
T 3tm4_A 202 LKASIANAMIELA-ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQL 280 (373)
T ss_dssp CCHHHHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGG
T ss_pred ccHHHHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhC
Confidence 3688999999888 88899999999999999999999665 99999999999999999999998867899999999998
Q ss_pred CC--CCcceeecccCcccc
Q 047897 92 EF--PQFDLVVANIPYGIS 108 (232)
Q Consensus 92 ~~--~~~D~Vi~n~p~~~~ 108 (232)
+. .+||+|++|+||+..
T Consensus 281 ~~~~~~fD~Ii~npPyg~r 299 (373)
T 3tm4_A 281 SQYVDSVDFAISNLPYGLK 299 (373)
T ss_dssp GGTCSCEEEEEEECCCC--
T ss_pred CcccCCcCEEEECCCCCcc
Confidence 75 379999999999754
No 16
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.59 E-value=9.2e-15 Score=117.77 Aligned_cols=77 Identities=23% Similarity=0.298 Sum_probs=69.8
Q ss_pred CCCCCEEEEEcCCccHhHHHHHh----cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCCCcceeeccc
Q 047897 28 INPDDTVLEIGPGTGNLTLKLLE----VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANI 103 (232)
Q Consensus 28 ~~~~~~vLDiG~G~G~~t~~l~~----~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vi~n~ 103 (232)
++++.+|||+|||+|.++..+++ .+.+|+|+|+|+.|++.|++++...+...+++++++|+.+++.+++|+|+++.
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~v~~~~ 147 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLNF 147 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEEEEEES
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccccccccceeee
Confidence 56889999999999999999987 35699999999999999999999887767899999999999999999999875
Q ss_pred C
Q 047897 104 P 104 (232)
Q Consensus 104 p 104 (232)
.
T Consensus 148 ~ 148 (261)
T 4gek_A 148 T 148 (261)
T ss_dssp C
T ss_pred e
Confidence 4
No 17
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.58 E-value=4.7e-14 Score=107.66 Aligned_cols=92 Identities=16% Similarity=0.362 Sum_probs=81.3
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCc-cEEEEEcCCCCCCC-C
Q 047897 17 RVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHD-RLNVISKDALKTEF-P 94 (232)
Q Consensus 17 ~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-~~~~~~~D~~~~~~-~ 94 (232)
...+.+++.+...++.+|||+|||+|.++..+++.+.+++|+|+++.+++.+++++...+... +++++.+|+.+... .
T Consensus 39 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 118 (194)
T 1dus_A 39 KGTKILVENVVVDKDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKDR 118 (194)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCTTS
T ss_pred hHHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccccC
Confidence 688889999988889999999999999999999888899999999999999999998877642 49999999987543 3
Q ss_pred CcceeecccCcccc
Q 047897 95 QFDLVVANIPYGIS 108 (232)
Q Consensus 95 ~~D~Vi~n~p~~~~ 108 (232)
+||+|++|+||+..
T Consensus 119 ~~D~v~~~~~~~~~ 132 (194)
T 1dus_A 119 KYNKIITNPPIRAG 132 (194)
T ss_dssp CEEEEEECCCSTTC
T ss_pred CceEEEECCCcccc
Confidence 79999999998864
No 18
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.58 E-value=1.7e-14 Score=113.71 Aligned_cols=96 Identities=23% Similarity=0.294 Sum_probs=75.9
Q ss_pred cCCHHHHHHHHHhcCCCCCCEEEEEcCC-ccHhHHHHHhc-CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCC
Q 047897 13 LTNQRVLDSIVRKSSINPDDTVLEIGPG-TGNLTLKLLEV-SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALK 90 (232)
Q Consensus 13 l~~~~~~~~i~~~~~~~~~~~vLDiG~G-~G~~t~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~ 90 (232)
+.++...+.++-...+.++.+|||+||| +|.++..+++. +.+|+|+|+|+.+++.|++++...+. +++++++|+..
T Consensus 38 ~~p~~~~~~l~~~~~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~ 115 (230)
T 3evz_A 38 LVTTPISRYIFLKTFLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNS--NVRLVKSNGGI 115 (230)
T ss_dssp CCCCHHHHHHHHHTTCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTC--CCEEEECSSCS
T ss_pred EeCCCchhhhHhHhhcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCC--CcEEEeCCchh
Confidence 3344455666344445788999999999 99999999986 89999999999999999999998876 69999999643
Q ss_pred ---CCCCCcceeecccCcccchH
Q 047897 91 ---TEFPQFDLVVANIPYGISSP 110 (232)
Q Consensus 91 ---~~~~~~D~Vi~n~p~~~~~~ 110 (232)
++.++||+|++|+||.....
T Consensus 116 ~~~~~~~~fD~I~~npp~~~~~~ 138 (230)
T 3evz_A 116 IKGVVEGTFDVIFSAPPYYDKPL 138 (230)
T ss_dssp STTTCCSCEEEEEECCCCC----
T ss_pred hhhcccCceeEEEECCCCcCCcc
Confidence 33358999999999987543
No 19
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.57 E-value=2.3e-15 Score=119.56 Aligned_cols=96 Identities=23% Similarity=0.286 Sum_probs=80.1
Q ss_pred CHHHHHHHHHhcC-CCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCC
Q 047897 15 NQRVLDSIVRKSS-INPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEF 93 (232)
Q Consensus 15 ~~~~~~~i~~~~~-~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~ 93 (232)
+..+.+.++..+. ..++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.+++++...++.++++++++|+.+.+.
T Consensus 62 ~~~~~~~l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 141 (241)
T 3gdh_A 62 PEKIAEHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLAS 141 (241)
T ss_dssp CHHHHHHHHHHHHHHSCCSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGG
T ss_pred HHHHHHHHHHHhhhccCCCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcc
Confidence 3445566555442 236889999999999999999998899999999999999999999988875689999999988754
Q ss_pred -CCcceeecccCcccchH
Q 047897 94 -PQFDLVVANIPYGISSP 110 (232)
Q Consensus 94 -~~~D~Vi~n~p~~~~~~ 110 (232)
.+||+|++|+||+....
T Consensus 142 ~~~~D~v~~~~~~~~~~~ 159 (241)
T 3gdh_A 142 FLKADVVFLSPPWGGPDY 159 (241)
T ss_dssp GCCCSEEEECCCCSSGGG
T ss_pred cCCCCEEEECCCcCCcch
Confidence 38999999999987543
No 20
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.57 E-value=8e-15 Score=123.18 Aligned_cols=96 Identities=23% Similarity=0.330 Sum_probs=85.2
Q ss_pred ccCCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcC---CeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCC
Q 047897 12 ILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVS---KKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDA 88 (232)
Q Consensus 12 fl~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~ 88 (232)
...++.+++.++..+.+.++.+|||+|||+|.++..++... .+++|+|+|+.+++.|++++...|+. +++++++|+
T Consensus 185 a~l~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~ 263 (354)
T 3tma_A 185 GSLTPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADA 263 (354)
T ss_dssp CSCCHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCG
T ss_pred CCcCHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCCh
Confidence 34568899999999999899999999999999999999843 89999999999999999999999885 899999999
Q ss_pred CCCCC--CCcceeecccCcccc
Q 047897 89 LKTEF--PQFDLVVANIPYGIS 108 (232)
Q Consensus 89 ~~~~~--~~~D~Vi~n~p~~~~ 108 (232)
.+++. +.||+|++|+||+..
T Consensus 264 ~~~~~~~~~~D~Ii~npPyg~r 285 (354)
T 3tma_A 264 RHLPRFFPEVDRILANPPHGLR 285 (354)
T ss_dssp GGGGGTCCCCSEEEECCCSCC-
T ss_pred hhCccccCCCCEEEECCCCcCc
Confidence 99764 368999999999764
No 21
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.57 E-value=7e-15 Score=119.89 Aligned_cols=94 Identities=24% Similarity=0.380 Sum_probs=78.6
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc-CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCCC
Q 047897 17 RVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV-SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFPQ 95 (232)
Q Consensus 17 ~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~~ 95 (232)
.+++.+++.+...++.+|||+|||+|.++..++.. +.+|+|+|+|+.+++.|++++...++.++++++++|+.+...++
T Consensus 110 ~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~~~ 189 (284)
T 1nv8_A 110 ELVELALELIRKYGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEK 189 (284)
T ss_dssp HHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGGGG
T ss_pred HHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcccc
Confidence 35556665554346679999999999999999985 78999999999999999999999888667999999998843347
Q ss_pred c---ceeecccCcccchH
Q 047897 96 F---DLVVANIPYGISSP 110 (232)
Q Consensus 96 ~---D~Vi~n~p~~~~~~ 110 (232)
| |+|++|+||.....
T Consensus 190 f~~~D~IvsnPPyi~~~~ 207 (284)
T 1nv8_A 190 FASIEMILSNPPYVKSSA 207 (284)
T ss_dssp TTTCCEEEECCCCBCGGG
T ss_pred cCCCCEEEEcCCCCCccc
Confidence 8 99999999987653
No 22
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.57 E-value=9.3e-15 Score=112.87 Aligned_cols=97 Identities=20% Similarity=0.277 Sum_probs=74.8
Q ss_pred cCCCcccccCCHHHHHHHHHhc---CCCCCCEEEEEcCCccHhHHHHHhcC-CeEEEEEcCHHHHHHHHHHHhhcCCCcc
Q 047897 5 HKSKGQHILTNQRVLDSIVRKS---SINPDDTVLEIGPGTGNLTLKLLEVS-KKVHAIEIDERMVEILNRRAADSGFHDR 80 (232)
Q Consensus 5 ~k~~gq~fl~~~~~~~~i~~~~---~~~~~~~vLDiG~G~G~~t~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~ 80 (232)
+..++| |.+++.+.+.++..+ ...++.+|||+|||+|.++..++..+ .+|+|+|+|+.+++.+++++. +
T Consensus 24 ~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~------~ 96 (200)
T 1ne2_A 24 KNYLEQ-YPTDASTAAYFLIEIYNDGNIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG------G 96 (200)
T ss_dssp -------CCCCHHHHHHHHHHHHHHTSSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT------T
T ss_pred ccceee-cCCCHHHHHHHHHHHHhcCCCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC------C
Confidence 334455 566778877777655 34577899999999999999999864 479999999999999999874 5
Q ss_pred EEEEEcCCCCCCCCCcceeecccCcccch
Q 047897 81 LNVISKDALKTEFPQFDLVVANIPYGISS 109 (232)
Q Consensus 81 ~~~~~~D~~~~~~~~~D~Vi~n~p~~~~~ 109 (232)
++++++|+.+++ ++||+|++|+||+...
T Consensus 97 ~~~~~~d~~~~~-~~~D~v~~~~p~~~~~ 124 (200)
T 1ne2_A 97 VNFMVADVSEIS-GKYDTWIMNPPFGSVV 124 (200)
T ss_dssp SEEEECCGGGCC-CCEEEEEECCCC----
T ss_pred CEEEECcHHHCC-CCeeEEEECCCchhcc
Confidence 899999999876 6899999999998764
No 23
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.57 E-value=7.9e-15 Score=117.97 Aligned_cols=86 Identities=24% Similarity=0.407 Sum_probs=73.4
Q ss_pred HHhcCCC-CCCEEEEEcCCccHhHHHHHhcC-CeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC----CCCc
Q 047897 23 VRKSSIN-PDDTVLEIGPGTGNLTLKLLEVS-KKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE----FPQF 96 (232)
Q Consensus 23 ~~~~~~~-~~~~vLDiG~G~G~~t~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~----~~~~ 96 (232)
...+.+. ++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|++++...++.++++++++|+.+.. ..+|
T Consensus 41 ~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~f 120 (259)
T 3lpm_A 41 AKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERA 120 (259)
T ss_dssp HHHCCCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCE
T ss_pred HHHhcCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCc
Confidence 3445667 78999999999999999999854 4999999999999999999999888778999999998875 3489
Q ss_pred ceeecccCcccc
Q 047897 97 DLVVANIPYGIS 108 (232)
Q Consensus 97 D~Vi~n~p~~~~ 108 (232)
|+|++|+||...
T Consensus 121 D~Ii~npPy~~~ 132 (259)
T 3lpm_A 121 DIVTCNPPYFAT 132 (259)
T ss_dssp EEEEECCCC---
T ss_pred cEEEECCCCCCC
Confidence 999999999655
No 24
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.55 E-value=3.9e-14 Score=110.05 Aligned_cols=93 Identities=18% Similarity=0.269 Sum_probs=82.5
Q ss_pred ccCCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCC
Q 047897 12 ILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKT 91 (232)
Q Consensus 12 fl~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~ 91 (232)
+...+.+...+++.+++.++.+|||+|||+|.++..+++.+.+|+++|+++.+++.+++++...+. ++++++.+|+.+.
T Consensus 59 ~~~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~ 137 (210)
T 3lbf_A 59 TISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLDL-HNVSTRHGDGWQG 137 (210)
T ss_dssp EECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEESCGGGC
T ss_pred EeCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCC-CceEEEECCcccC
Confidence 445689999999999999999999999999999999999889999999999999999999998887 4799999999886
Q ss_pred CC--CCcceeecccCc
Q 047897 92 EF--PQFDLVVANIPY 105 (232)
Q Consensus 92 ~~--~~~D~Vi~n~p~ 105 (232)
.. .+||+|+++.+.
T Consensus 138 ~~~~~~~D~i~~~~~~ 153 (210)
T 3lbf_A 138 WQARAPFDAIIVTAAP 153 (210)
T ss_dssp CGGGCCEEEEEESSBC
T ss_pred CccCCCccEEEEccch
Confidence 54 379999987543
No 25
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.55 E-value=5.9e-14 Score=108.97 Aligned_cols=93 Identities=14% Similarity=0.214 Sum_probs=82.0
Q ss_pred ccCCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCC
Q 047897 12 ILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKT 91 (232)
Q Consensus 12 fl~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~ 91 (232)
.++.+.+...+++.+.+.++++|||+|||+|.++..+++.+.+|+|+|+++.+++.|++++...+++++++++.+|+.+.
T Consensus 37 ~~~~~~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~ 116 (204)
T 3njr_A 37 QITKSPMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAA 116 (204)
T ss_dssp CCCCHHHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGG
T ss_pred CCCcHHHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhh
Confidence 45667888889999998899999999999999999999988999999999999999999999888855899999999883
Q ss_pred -C-CCCcceeecccC
Q 047897 92 -E-FPQFDLVVANIP 104 (232)
Q Consensus 92 -~-~~~~D~Vi~n~p 104 (232)
+ .+.||+|+++..
T Consensus 117 ~~~~~~~D~v~~~~~ 131 (204)
T 3njr_A 117 LADLPLPEAVFIGGG 131 (204)
T ss_dssp GTTSCCCSEEEECSC
T ss_pred cccCCCCCEEEECCc
Confidence 3 247999998753
No 26
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.55 E-value=1.5e-13 Score=106.44 Aligned_cols=99 Identities=15% Similarity=0.206 Sum_probs=84.9
Q ss_pred CCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcC--CeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCC
Q 047897 14 TNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVS--KKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKT 91 (232)
Q Consensus 14 ~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~ 91 (232)
+.+.+...+++.+.+.++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.+++++...++ ++++++.+|+.+.
T Consensus 24 ~~~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~ 102 (204)
T 3e05_A 24 TKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVA-RNVTLVEAFAPEG 102 (204)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTC-TTEEEEECCTTTT
T ss_pred ChHHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeCChhhh
Confidence 667888899999999999999999999999999999854 8999999999999999999998887 6899999999765
Q ss_pred CC--CCcceeecccCcccchHHHH
Q 047897 92 EF--PQFDLVVANIPYGISSPLVA 113 (232)
Q Consensus 92 ~~--~~~D~Vi~n~p~~~~~~~l~ 113 (232)
.. +.||+|+++.+.+.....+.
T Consensus 103 ~~~~~~~D~i~~~~~~~~~~~~l~ 126 (204)
T 3e05_A 103 LDDLPDPDRVFIGGSGGMLEEIID 126 (204)
T ss_dssp CTTSCCCSEEEESCCTTCHHHHHH
T ss_pred hhcCCCCCEEEECCCCcCHHHHHH
Confidence 33 58999999887664444443
No 27
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.55 E-value=4e-14 Score=107.86 Aligned_cols=79 Identities=23% Similarity=0.296 Sum_probs=68.7
Q ss_pred CCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCC---CCCCcceeeccc
Q 047897 27 SINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKT---EFPQFDLVVANI 103 (232)
Q Consensus 27 ~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~---~~~~~D~Vi~n~ 103 (232)
.+.++++|||+|||+|.++..+++.+.+|+|+|+|+.+++.|++++...++ ++++++++|+.++ ..++||+|++|+
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~~~~~l~~~~~~~fD~v~~~~ 97 (185)
T 3mti_A 19 VLDDESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLSDLGI-ENTELILDGHENLDHYVREPIRAAIFNL 97 (185)
T ss_dssp TCCTTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHHTC-CCEEEEESCGGGGGGTCCSCEEEEEEEE
T ss_pred hCCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCcHHHHHhhccCCcCEEEEeC
Confidence 356789999999999999999999889999999999999999999998887 6899999888773 334799999997
Q ss_pred Ccc
Q 047897 104 PYG 106 (232)
Q Consensus 104 p~~ 106 (232)
+|.
T Consensus 98 ~~~ 100 (185)
T 3mti_A 98 GYL 100 (185)
T ss_dssp C--
T ss_pred CCC
Confidence 664
No 28
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.55 E-value=2.2e-14 Score=121.62 Aligned_cols=94 Identities=17% Similarity=0.335 Sum_probs=83.7
Q ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcC----------------------------------------Ce
Q 047897 15 NQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVS----------------------------------------KK 54 (232)
Q Consensus 15 ~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~----------------------------------------~~ 54 (232)
.+.+++.|+...++.++..|||+|||+|.++..++..+ .+
T Consensus 180 ~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 259 (385)
T 3ldu_A 180 RETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFK 259 (385)
T ss_dssp CHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCC
T ss_pred cHHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCce
Confidence 47899999999999899999999999999999887632 47
Q ss_pred EEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC-CcceeecccCcccc
Q 047897 55 VHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP-QFDLVVANIPYGIS 108 (232)
Q Consensus 55 v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~-~~D~Vi~n~p~~~~ 108 (232)
|+|+|+|+.+++.|++|+...|+.+++++.++|+.+++.+ ++|+|++||||...
T Consensus 260 V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv~NPPyg~r 314 (385)
T 3ldu_A 260 IYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSEDEFGFIITNPPYGER 314 (385)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEEECCCCCCS
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcCCCCcEEEECCCCcCc
Confidence 9999999999999999999999866899999999998764 79999999999743
No 29
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.55 E-value=3.2e-14 Score=120.45 Aligned_cols=94 Identities=20% Similarity=0.359 Sum_probs=83.8
Q ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcC----------------------------------------Ce
Q 047897 15 NQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVS----------------------------------------KK 54 (232)
Q Consensus 15 ~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~----------------------------------------~~ 54 (232)
.+.+++.|+...++.++..+||++||+|.++.+++..+ .+
T Consensus 179 ~e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 258 (384)
T 3ldg_A 179 KENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLD 258 (384)
T ss_dssp CHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCC
T ss_pred cHHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCce
Confidence 47899999999999999999999999999998887622 35
Q ss_pred EEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC-CcceeecccCcccc
Q 047897 55 VHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP-QFDLVVANIPYGIS 108 (232)
Q Consensus 55 v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~-~~D~Vi~n~p~~~~ 108 (232)
|+|+|+|+.+++.|++|+...|+.++++++++|+.+++.+ +||+|++||||+..
T Consensus 259 v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv~NPPYG~r 313 (384)
T 3ldg_A 259 ISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNKINGVLISNPPYGER 313 (384)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCCCCSCEEEECCCCTTT
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCccCCcCEEEECCchhhc
Confidence 9999999999999999999999877799999999998764 79999999999743
No 30
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.55 E-value=2.8e-14 Score=121.25 Aligned_cols=94 Identities=22% Similarity=0.398 Sum_probs=84.0
Q ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcC----------------------------------------Ce
Q 047897 15 NQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVS----------------------------------------KK 54 (232)
Q Consensus 15 ~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~----------------------------------------~~ 54 (232)
.+.+++.++...++.++..|||++||+|.++..++..+ .+
T Consensus 186 ~e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 265 (393)
T 3k0b_A 186 KETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLN 265 (393)
T ss_dssp CHHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCC
T ss_pred cHHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCce
Confidence 48899999999999999999999999999998887622 35
Q ss_pred EEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC-CcceeecccCcccc
Q 047897 55 VHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP-QFDLVVANIPYGIS 108 (232)
Q Consensus 55 v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~-~~D~Vi~n~p~~~~ 108 (232)
|+|+|+|+.+++.|++|+...|+.++++++++|+.+.+.+ +||+|++||||+..
T Consensus 266 V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv~NPPYg~r 320 (393)
T 3k0b_A 266 IIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVANPPYGER 320 (393)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEECCCCCCS
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCCCCCCEEEECCCCccc
Confidence 9999999999999999999999876799999999998764 79999999999754
No 31
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.54 E-value=6.1e-14 Score=120.82 Aligned_cols=100 Identities=19% Similarity=0.283 Sum_probs=85.2
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC----
Q 047897 17 RVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE---- 92 (232)
Q Consensus 17 ~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~---- 92 (232)
.+++.+++.++..++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|++++..+++ .+++++++|+.+..
T Consensus 273 ~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~n~~~~~~-~~v~f~~~d~~~~l~~~~ 351 (433)
T 1uwv_A 273 KMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGL-QNVTFYHENLEEDVTKQP 351 (433)
T ss_dssp HHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEECCTTSCCSSSG
T ss_pred HHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHHHHHHcCC-CceEEEECCHHHHhhhhh
Confidence 4666667777777888999999999999999999889999999999999999999998887 48999999998832
Q ss_pred C--CCcceeecccCcccchHHHHHHhc
Q 047897 93 F--PQFDLVVANIPYGISSPLVAKLVY 117 (232)
Q Consensus 93 ~--~~~D~Vi~n~p~~~~~~~l~~~~~ 117 (232)
. .+||+|++|+|+....+.+..+..
T Consensus 352 ~~~~~fD~Vv~dPPr~g~~~~~~~l~~ 378 (433)
T 1uwv_A 352 WAKNGFDKVLLDPARAGAAGVMQQIIK 378 (433)
T ss_dssp GGTTCCSEEEECCCTTCCHHHHHHHHH
T ss_pred hhcCCCCEEEECCCCccHHHHHHHHHh
Confidence 2 379999999999877766665554
No 32
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.54 E-value=7.6e-14 Score=111.71 Aligned_cols=80 Identities=15% Similarity=0.214 Sum_probs=67.1
Q ss_pred CCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCC---CC-----CCccee
Q 047897 30 PDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKT---EF-----PQFDLV 99 (232)
Q Consensus 30 ~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~---~~-----~~~D~V 99 (232)
++.+|||+|||+|.++..++.. +.+|+|+|+|+.+++.|++++...++.++++++++|+.+. +. .+||+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 4679999999999999998873 6899999999999999999999888766799999997652 22 369999
Q ss_pred ecccCcccch
Q 047897 100 VANIPYGISS 109 (232)
Q Consensus 100 i~n~p~~~~~ 109 (232)
++|+||+...
T Consensus 145 ~~npp~~~~~ 154 (254)
T 2h00_A 145 MCNPPFFANQ 154 (254)
T ss_dssp EECCCCC---
T ss_pred EECCCCccCc
Confidence 9999998654
No 33
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.54 E-value=1.7e-14 Score=109.84 Aligned_cols=94 Identities=23% Similarity=0.315 Sum_probs=79.7
Q ss_pred CCHHHHHHHHHhcC-CCCCCEEEEEcCCccHhHHHHHhcC-CeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCC
Q 047897 14 TNQRVLDSIVRKSS-INPDDTVLEIGPGTGNLTLKLLEVS-KKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKT 91 (232)
Q Consensus 14 ~~~~~~~~i~~~~~-~~~~~~vLDiG~G~G~~t~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~ 91 (232)
+.+.+.+.+++.+. ..++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|++++...++.++++++++|+.+.
T Consensus 27 ~~~~~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 106 (187)
T 2fhp_A 27 TTDKVKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRA 106 (187)
T ss_dssp CCHHHHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH
T ss_pred CHHHHHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHH
Confidence 34678888888774 4578899999999999999888754 799999999999999999999887756899999999874
Q ss_pred C------CCCcceeecccCccc
Q 047897 92 E------FPQFDLVVANIPYGI 107 (232)
Q Consensus 92 ~------~~~~D~Vi~n~p~~~ 107 (232)
. ..+||+|++|+||+.
T Consensus 107 ~~~~~~~~~~fD~i~~~~~~~~ 128 (187)
T 2fhp_A 107 LEQFYEEKLQFDLVLLDPPYAK 128 (187)
T ss_dssp HHHHHHTTCCEEEEEECCCGGG
T ss_pred HHHHHhcCCCCCEEEECCCCCc
Confidence 2 358999999999763
No 34
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.54 E-value=7.2e-14 Score=111.71 Aligned_cols=91 Identities=18% Similarity=0.287 Sum_probs=80.6
Q ss_pred CCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc-CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC
Q 047897 14 TNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV-SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE 92 (232)
Q Consensus 14 ~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~ 92 (232)
..+..++.+++.+.+.++.+|||||||+|.++..+++. +.+|+|+|+++.+++.+++++...++.++++++.+|+.+.+
T Consensus 20 ~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~ 99 (256)
T 1nkv_A 20 FTEEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYV 99 (256)
T ss_dssp CCHHHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCC
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCC
Confidence 34788999999999889999999999999999999984 67999999999999999999998887668999999999876
Q ss_pred C-CCcceeecccC
Q 047897 93 F-PQFDLVVANIP 104 (232)
Q Consensus 93 ~-~~~D~Vi~n~p 104 (232)
. .+||+|+++-.
T Consensus 100 ~~~~fD~V~~~~~ 112 (256)
T 1nkv_A 100 ANEKCDVAACVGA 112 (256)
T ss_dssp CSSCEEEEEEESC
T ss_pred cCCCCCEEEECCC
Confidence 5 47999998543
No 35
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.54 E-value=2.3e-14 Score=115.40 Aligned_cols=85 Identities=20% Similarity=0.301 Sum_probs=71.7
Q ss_pred HhcCCCCCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhh---cCCCccEEEEEcCCCCC-------
Q 047897 24 RKSSINPDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAAD---SGFHDRLNVISKDALKT------- 91 (232)
Q Consensus 24 ~~~~~~~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~---~~~~~~~~~~~~D~~~~------- 91 (232)
..+...++.+|||+|||+|.++..++.. ..+|+|+|+++.+++.|++++.. .++.++++++++|+.+.
T Consensus 30 ~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~ 109 (260)
T 2ozv_A 30 SLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEA 109 (260)
T ss_dssp HTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHT
T ss_pred HHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhh
Confidence 4455667889999999999999999984 57999999999999999999988 77766899999999887
Q ss_pred --CCCCcceeecccCcccc
Q 047897 92 --EFPQFDLVVANIPYGIS 108 (232)
Q Consensus 92 --~~~~~D~Vi~n~p~~~~ 108 (232)
+..+||+|++|+||...
T Consensus 110 ~~~~~~fD~Vv~nPPy~~~ 128 (260)
T 2ozv_A 110 GLPDEHFHHVIMNPPYNDA 128 (260)
T ss_dssp TCCTTCEEEEEECCCC---
T ss_pred ccCCCCcCEEEECCCCcCC
Confidence 13479999999999875
No 36
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.53 E-value=2.7e-14 Score=107.99 Aligned_cols=91 Identities=19% Similarity=0.331 Sum_probs=76.5
Q ss_pred HHHHHHHHHhcC-CCCCCEEEEEcCCccHhHHHHHhc-CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCC-C
Q 047897 16 QRVLDSIVRKSS-INPDDTVLEIGPGTGNLTLKLLEV-SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKT-E 92 (232)
Q Consensus 16 ~~~~~~i~~~~~-~~~~~~vLDiG~G~G~~t~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~-~ 92 (232)
..+.+.+++.+. ..++.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.+++++...++.++++++.+|+.+. +
T Consensus 16 ~~~~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 95 (177)
T 2esr_A 16 DKVRGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAID 95 (177)
T ss_dssp --CHHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHH
T ss_pred HHHHHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHH
Confidence 456677777775 567889999999999999999886 4699999999999999999999888766899999999873 2
Q ss_pred --CCCcceeecccCcc
Q 047897 93 --FPQFDLVVANIPYG 106 (232)
Q Consensus 93 --~~~~D~Vi~n~p~~ 106 (232)
...||+|++|+||+
T Consensus 96 ~~~~~fD~i~~~~~~~ 111 (177)
T 2esr_A 96 CLTGRFDLVFLDPPYA 111 (177)
T ss_dssp HBCSCEEEEEECCSSH
T ss_pred hhcCCCCEEEECCCCC
Confidence 24799999999985
No 37
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.52 E-value=8.3e-14 Score=116.53 Aligned_cols=99 Identities=14% Similarity=0.254 Sum_probs=79.6
Q ss_pred CCCcccccCCHHHHHHHHHhc----CCCCCCEEEEEcCCccHhHHHHHhcC-------CeEEEEEcCHHHHHHHHHHHhh
Q 047897 6 KSKGQHILTNQRVLDSIVRKS----SINPDDTVLEIGPGTGNLTLKLLEVS-------KKVHAIEIDERMVEILNRRAAD 74 (232)
Q Consensus 6 k~~gq~fl~~~~~~~~i~~~~----~~~~~~~vLDiG~G~G~~t~~l~~~~-------~~v~~vD~~~~~~~~a~~~~~~ 74 (232)
+.+|+.| +++.+...+...+ +..++.+|||+|||+|.++..+++.. .+++|+|+++.+++.|+.++..
T Consensus 103 ~~~g~~~-TP~~i~~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~ 181 (344)
T 2f8l_A 103 IQVNHQM-TPDSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADL 181 (344)
T ss_dssp CCGGGCC-CCHHHHHHHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHH
T ss_pred cccCcCC-ChHHHHHHHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHh
Confidence 4578855 7677765544433 44567899999999999999988732 7899999999999999999988
Q ss_pred cCCCccEEEEEcCCCCCCC-CCcceeecccCccc
Q 047897 75 SGFHDRLNVISKDALKTEF-PQFDLVVANIPYGI 107 (232)
Q Consensus 75 ~~~~~~~~~~~~D~~~~~~-~~~D~Vi~n~p~~~ 107 (232)
.|. ++.++++|++.... ..||+|++|+||+.
T Consensus 182 ~g~--~~~i~~~D~l~~~~~~~fD~Ii~NPPfg~ 213 (344)
T 2f8l_A 182 QRQ--KMTLLHQDGLANLLVDPVDVVISDLPVGY 213 (344)
T ss_dssp HTC--CCEEEESCTTSCCCCCCEEEEEEECCCSE
T ss_pred CCC--CceEEECCCCCccccCCccEEEECCCCCC
Confidence 776 58999999987543 48999999999854
No 38
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.51 E-value=8.9e-14 Score=112.98 Aligned_cols=85 Identities=22% Similarity=0.306 Sum_probs=73.3
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCccHhHHHH-Hh-cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC
Q 047897 17 RVLDSIVRKSSINPDDTVLEIGPGTGNLTLKL-LE-VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP 94 (232)
Q Consensus 17 ~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l-~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~ 94 (232)
.+++.....+++.++++|||||||+|.++..+ ++ .+++|+|+|+|+++++.|++++...|+ ++++++++|+.+++..
T Consensus 109 ~l~~~E~~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l~d~ 187 (298)
T 3fpf_A 109 ELLKNEAALGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVIDGL 187 (298)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGGGGC
T ss_pred HHHHHHHHHcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhCCCC
Confidence 45555557788999999999999999877554 44 689999999999999999999998888 7999999999998867
Q ss_pred Ccceeecc
Q 047897 95 QFDLVVAN 102 (232)
Q Consensus 95 ~~D~Vi~n 102 (232)
+||+|+++
T Consensus 188 ~FDvV~~~ 195 (298)
T 3fpf_A 188 EFDVLMVA 195 (298)
T ss_dssp CCSEEEEC
T ss_pred CcCEEEEC
Confidence 89999864
No 39
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.51 E-value=1.4e-14 Score=112.14 Aligned_cols=92 Identities=22% Similarity=0.319 Sum_probs=74.4
Q ss_pred HHHHHHHHHhcCCC-CCCEEEEEcCCccHhHHHHHhcC-CeEEEEEcCHHHHHHHHHHHhhcCCC-ccEEEEEcCCCCCC
Q 047897 16 QRVLDSIVRKSSIN-PDDTVLEIGPGTGNLTLKLLEVS-KKVHAIEIDERMVEILNRRAADSGFH-DRLNVISKDALKTE 92 (232)
Q Consensus 16 ~~~~~~i~~~~~~~-~~~~vLDiG~G~G~~t~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~-~~~~~~~~D~~~~~ 92 (232)
..+.+.+++.+... ++.+|||+|||+|.++..++..+ .+|+|+|+|+.+++.|++++...++. ++++++++|+.+..
T Consensus 38 ~~~~~~l~~~l~~~~~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~ 117 (201)
T 2ift_A 38 DRVKETLFNWLMPYIHQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFL 117 (201)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHT
T ss_pred HHHHHHHHHHHHHhcCCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHH
Confidence 34555666555432 67899999999999999877754 69999999999999999999988863 47999999987742
Q ss_pred ----CCC-cceeecccCccc
Q 047897 93 ----FPQ-FDLVVANIPYGI 107 (232)
Q Consensus 93 ----~~~-~D~Vi~n~p~~~ 107 (232)
..+ ||+|++|+||+.
T Consensus 118 ~~~~~~~~fD~I~~~~~~~~ 137 (201)
T 2ift_A 118 KQPQNQPHFDVVFLDPPFHF 137 (201)
T ss_dssp TSCCSSCCEEEEEECCCSSS
T ss_pred HhhccCCCCCEEEECCCCCC
Confidence 247 999999999863
No 40
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.50 E-value=1.2e-13 Score=112.08 Aligned_cols=92 Identities=20% Similarity=0.341 Sum_probs=78.0
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHh--cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC-C
Q 047897 17 RVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLE--VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE-F 93 (232)
Q Consensus 17 ~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~-~ 93 (232)
.+++.+++.+. .++.+|||+|||+|.++..++. ...+|+|+|+|+.+++.+++++...+++ +++++++|+.+.. .
T Consensus 97 ~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~-~v~~~~~d~~~~~~~ 174 (276)
T 2b3t_A 97 CLVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSALAG 174 (276)
T ss_dssp HHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCSTTGGGTT
T ss_pred HHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEEcchhhhccc
Confidence 36666777665 5678999999999999999986 3689999999999999999999988874 7999999998753 3
Q ss_pred CCcceeecccCcccchH
Q 047897 94 PQFDLVVANIPYGISSP 110 (232)
Q Consensus 94 ~~~D~Vi~n~p~~~~~~ 110 (232)
.+||+|++|+||.....
T Consensus 175 ~~fD~Iv~npPy~~~~~ 191 (276)
T 2b3t_A 175 QQFAMIVSNPPYIDEQD 191 (276)
T ss_dssp CCEEEEEECCCCBCTTC
T ss_pred CCccEEEECCCCCCccc
Confidence 48999999999987643
No 41
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.50 E-value=8.9e-14 Score=112.66 Aligned_cols=100 Identities=17% Similarity=0.142 Sum_probs=81.5
Q ss_pred CCCcccccCCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEE
Q 047897 6 KSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAADSGFHDRLNV 83 (232)
Q Consensus 6 k~~gq~fl~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~ 83 (232)
...+..|+.++...+.......+.++++|||+|||+|.++..+++. ..+|+|+|+++.+++.|++++..+++ +++.+
T Consensus 95 ~~~~~~f~~~~~~~e~~~~~~~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l-~~~~~ 173 (272)
T 3a27_A 95 LDVAKIMWSQGNIEERKRMAFISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKL-NNVIP 173 (272)
T ss_dssp EETTTSCCCGGGHHHHHHHHTSCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTC-SSEEE
T ss_pred EechhEEECCCchHHHHHHHHhcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC-CCEEE
Confidence 3444555666655555554555678899999999999999999985 45999999999999999999999887 47999
Q ss_pred EEcCCCCCCC-CCcceeecccCcc
Q 047897 84 ISKDALKTEF-PQFDLVVANIPYG 106 (232)
Q Consensus 84 ~~~D~~~~~~-~~~D~Vi~n~p~~ 106 (232)
+++|+.+.+. ..||+|++|+|+.
T Consensus 174 ~~~d~~~~~~~~~~D~Vi~d~p~~ 197 (272)
T 3a27_A 174 ILADNRDVELKDVADRVIMGYVHK 197 (272)
T ss_dssp EESCGGGCCCTTCEEEEEECCCSS
T ss_pred EECChHHcCccCCceEEEECCccc
Confidence 9999998843 3799999999973
No 42
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.50 E-value=2.6e-14 Score=110.81 Aligned_cols=91 Identities=20% Similarity=0.254 Sum_probs=75.3
Q ss_pred HHHHHHHHHhcCCC-CCCEEEEEcCCccHhHHHHHhcC-CeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCC-C
Q 047897 16 QRVLDSIVRKSSIN-PDDTVLEIGPGTGNLTLKLLEVS-KKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKT-E 92 (232)
Q Consensus 16 ~~~~~~i~~~~~~~-~~~~vLDiG~G~G~~t~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~-~ 92 (232)
..+.+.+++.+... ++.+|||+|||+|.++..++..+ .+|+|+|+|+.+++.|++++...++ ++++++++|+.+. +
T Consensus 39 ~~~~~~l~~~l~~~~~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~D~~~~~~ 117 (202)
T 2fpo_A 39 DRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKA-GNARVVNSNAMSFLA 117 (202)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCHHHHHS
T ss_pred HHHHHHHHHHHHhhcCCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEECCHHHHHh
Confidence 45666666665432 67899999999999999877754 5999999999999999999998887 5899999998773 3
Q ss_pred C--CCcceeecccCccc
Q 047897 93 F--PQFDLVVANIPYGI 107 (232)
Q Consensus 93 ~--~~~D~Vi~n~p~~~ 107 (232)
. ..||+|++|+||+.
T Consensus 118 ~~~~~fD~V~~~~p~~~ 134 (202)
T 2fpo_A 118 QKGTPHNIVFVDPPFRR 134 (202)
T ss_dssp SCCCCEEEEEECCSSST
T ss_pred hcCCCCCEEEECCCCCC
Confidence 2 47999999999874
No 43
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=99.50 E-value=5.3e-14 Score=124.05 Aligned_cols=101 Identities=17% Similarity=0.193 Sum_probs=85.5
Q ss_pred cCCCcccccCCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc-----------------CCeEEEEEcCHHHHHH
Q 047897 5 HKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV-----------------SKKVHAIEIDERMVEI 67 (232)
Q Consensus 5 ~k~~gq~fl~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~-----------------~~~v~~vD~~~~~~~~ 67 (232)
++..|| |++++.+++.|++.+.+.++ +|||.+||+|.+...+++. ...++|+|+++.++..
T Consensus 221 ~k~~G~-fyTP~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~l 298 (544)
T 3khk_A 221 GKQGGQ-YYTPKSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKL 298 (544)
T ss_dssp TCCSTT-TCCCHHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHH
T ss_pred CccCCe-EeCCHHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHH
Confidence 467788 77889999999999987666 9999999999988877541 4589999999999999
Q ss_pred HHHHHhhcCCCccEEEEEcCCCCCCC---CCcceeecccCccc
Q 047897 68 LNRRAADSGFHDRLNVISKDALKTEF---PQFDLVVANIPYGI 107 (232)
Q Consensus 68 a~~~~~~~~~~~~~~~~~~D~~~~~~---~~~D~Vi~n~p~~~ 107 (232)
|+.++..+|+..++.+.++|.+..+. ..||+|++||||..
T Consensus 299 A~~Nl~l~gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~ 341 (544)
T 3khk_A 299 AAMNMVIRGIDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNM 341 (544)
T ss_dssp HHHHHHHTTCCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSC
T ss_pred HHHHHHHhCCCcccceeccchhcCcccccccccEEEECCCcCC
Confidence 99999988876565568999887653 37999999999985
No 44
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.50 E-value=4.6e-13 Score=109.84 Aligned_cols=88 Identities=16% Similarity=0.099 Sum_probs=78.4
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc-CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCCC
Q 047897 17 RVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV-SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFPQ 95 (232)
Q Consensus 17 ~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~~ 95 (232)
..++.+++.+++.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.+++++...++.++++++.+|+.++ .++
T Consensus 59 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~ 137 (302)
T 3hem_A 59 AKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF-DEP 137 (302)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC-CCC
T ss_pred HHHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc-CCC
Confidence 35667888888889999999999999999999985 7999999999999999999999988867899999999988 568
Q ss_pred cceeecccCc
Q 047897 96 FDLVVANIPY 105 (232)
Q Consensus 96 ~D~Vi~n~p~ 105 (232)
||+|+++..+
T Consensus 138 fD~v~~~~~~ 147 (302)
T 3hem_A 138 VDRIVSLGAF 147 (302)
T ss_dssp CSEEEEESCG
T ss_pred ccEEEEcchH
Confidence 9999987543
No 45
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.49 E-value=2e-13 Score=103.07 Aligned_cols=94 Identities=22% Similarity=0.325 Sum_probs=79.9
Q ss_pred cCCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCC
Q 047897 13 LTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALK 90 (232)
Q Consensus 13 l~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~ 90 (232)
++.+.+.+.+++.+.+.++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.+++++...+.+.++ ++++|+.+
T Consensus 8 ~t~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~ 86 (178)
T 3hm2_A 8 LTKQHVRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPR 86 (178)
T ss_dssp SHHHHHHHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTG
T ss_pred ccHHHHHHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHh
Confidence 355778888999998889999999999999999999884 689999999999999999999988875589 88999854
Q ss_pred -CCC--CCcceeecccCccc
Q 047897 91 -TEF--PQFDLVVANIPYGI 107 (232)
Q Consensus 91 -~~~--~~~D~Vi~n~p~~~ 107 (232)
++. ++||+|+++.+.+.
T Consensus 87 ~~~~~~~~~D~i~~~~~~~~ 106 (178)
T 3hm2_A 87 AFDDVPDNPDVIFIGGGLTA 106 (178)
T ss_dssp GGGGCCSCCSEEEECC-TTC
T ss_pred hhhccCCCCCEEEECCcccH
Confidence 333 57999999877655
No 46
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.49 E-value=1.3e-13 Score=121.74 Aligned_cols=103 Identities=15% Similarity=0.254 Sum_probs=83.5
Q ss_pred cCCCcccccCCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc--------------------CCeEEEEEcCHHH
Q 047897 5 HKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV--------------------SKKVHAIEIDERM 64 (232)
Q Consensus 5 ~k~~gq~fl~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~--------------------~~~v~~vD~~~~~ 64 (232)
++..|| |++++.+++.|++.+.+.++.+|+|+|||+|.++..+++. ...++|+|+++.+
T Consensus 145 ~~~~G~-fyTP~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~ 223 (541)
T 2ar0_A 145 KSGAGQ-YFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGT 223 (541)
T ss_dssp -----C-CCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHH
T ss_pred cccCCe-eeCCHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHH
Confidence 356787 6688999999999998888899999999999999888762 1379999999999
Q ss_pred HHHHHHHHhhcCCCc----cEEEEEcCCCCCC---CCCcceeecccCcccc
Q 047897 65 VEILNRRAADSGFHD----RLNVISKDALKTE---FPQFDLVVANIPYGIS 108 (232)
Q Consensus 65 ~~~a~~~~~~~~~~~----~~~~~~~D~~~~~---~~~~D~Vi~n~p~~~~ 108 (232)
++.|+.++..+|... ++.+.++|++..+ ...||+|++||||...
T Consensus 224 ~~lA~~nl~l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~ 274 (541)
T 2ar0_A 224 RRLALMNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSA 274 (541)
T ss_dssp HHHHHHHHHTTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTC
T ss_pred HHHHHHHHHHhCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccc
Confidence 999999998887742 2789999998753 3489999999999865
No 47
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.49 E-value=4.9e-14 Score=106.28 Aligned_cols=86 Identities=23% Similarity=0.242 Sum_probs=69.5
Q ss_pred ccCCHHHHHHHHHhcCC--CCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCC
Q 047897 12 ILTNQRVLDSIVRKSSI--NPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDAL 89 (232)
Q Consensus 12 fl~~~~~~~~i~~~~~~--~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~ 89 (232)
.++++...+.+++.+.. .++.+|||+|||+|.++..+++.+ +|+|+|+|+.+++. .++++++++|+.
T Consensus 3 v~~P~~~~~~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~~-~v~gvD~s~~~~~~----------~~~~~~~~~d~~ 71 (170)
T 3q87_B 3 WYEPGEDTYTLMDALEREGLEMKIVLDLGTSTGVITEQLRKRN-TVVSTDLNIRALES----------HRGGNLVRADLL 71 (170)
T ss_dssp SCCCCHHHHHHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTTS-EEEEEESCHHHHHT----------CSSSCEEECSTT
T ss_pred ccCcCccHHHHHHHHHhhcCCCCeEEEeccCccHHHHHHHhcC-cEEEEECCHHHHhc----------ccCCeEEECChh
Confidence 34455556666666544 567799999999999999999987 99999999999987 157899999998
Q ss_pred CCCC-CCcceeecccCcccc
Q 047897 90 KTEF-PQFDLVVANIPYGIS 108 (232)
Q Consensus 90 ~~~~-~~~D~Vi~n~p~~~~ 108 (232)
+... ++||+|++|+||+..
T Consensus 72 ~~~~~~~fD~i~~n~~~~~~ 91 (170)
T 3q87_B 72 CSINQESVDVVVFNPPYVPD 91 (170)
T ss_dssp TTBCGGGCSEEEECCCCBTT
T ss_pred hhcccCCCCEEEECCCCccC
Confidence 7432 489999999999853
No 48
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.49 E-value=2.6e-13 Score=102.64 Aligned_cols=102 Identities=20% Similarity=0.285 Sum_probs=86.0
Q ss_pred cCCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC
Q 047897 13 LTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE 92 (232)
Q Consensus 13 l~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~ 92 (232)
...+.+.+.+++.+...++.+|||+|||+|.++..+++.+.+++|+|+++.+++.+++++...++ ++++++++|+.+ +
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~~d~~~-~ 95 (183)
T 2yxd_A 18 ITKEEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNLAKFNI-KNCQIIKGRAED-V 95 (183)
T ss_dssp CCCHHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHHHHTTC-CSEEEEESCHHH-H
T ss_pred cCHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHcCC-CcEEEEECCccc-c
Confidence 45578889999999888899999999999999999999888999999999999999999998887 579999999987 3
Q ss_pred C--CCcceeecccCcccchHHHHHHhc
Q 047897 93 F--PQFDLVVANIPYGISSPLVAKLVY 117 (232)
Q Consensus 93 ~--~~~D~Vi~n~p~~~~~~~l~~~~~ 117 (232)
. ++||+|+++.+ ......+..+..
T Consensus 96 ~~~~~~D~i~~~~~-~~~~~~l~~~~~ 121 (183)
T 2yxd_A 96 LDKLEFNKAFIGGT-KNIEKIIEILDK 121 (183)
T ss_dssp GGGCCCSEEEECSC-SCHHHHHHHHHH
T ss_pred ccCCCCcEEEECCc-ccHHHHHHHHhh
Confidence 3 37999999988 444445544443
No 49
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.49 E-value=2.9e-13 Score=109.26 Aligned_cols=91 Identities=27% Similarity=0.422 Sum_probs=79.6
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHh-cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC
Q 047897 16 QRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLE-VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP 94 (232)
Q Consensus 16 ~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~ 94 (232)
..+++.+++.+++.++.+|||||||+|.++..+++ .+.+|+|+|+|+.+++.+++++...++.++++++.+|+.+++++
T Consensus 47 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 126 (273)
T 3bus_A 47 DRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFE 126 (273)
T ss_dssp HHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSC
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCC
Confidence 35677888888888999999999999999999988 57899999999999999999998888767899999999988764
Q ss_pred --CcceeecccCcc
Q 047897 95 --QFDLVVANIPYG 106 (232)
Q Consensus 95 --~~D~Vi~n~p~~ 106 (232)
+||+|+++-.++
T Consensus 127 ~~~fD~v~~~~~l~ 140 (273)
T 3bus_A 127 DASFDAVWALESLH 140 (273)
T ss_dssp TTCEEEEEEESCTT
T ss_pred CCCccEEEEechhh
Confidence 799999875543
No 50
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.48 E-value=4.5e-13 Score=107.90 Aligned_cols=92 Identities=22% Similarity=0.316 Sum_probs=79.7
Q ss_pred CHHHHHHHHHhcC-CCCCCEEEEEcCCccHhHHHHHhc-CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC
Q 047897 15 NQRVLDSIVRKSS-INPDDTVLEIGPGTGNLTLKLLEV-SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE 92 (232)
Q Consensus 15 ~~~~~~~i~~~~~-~~~~~~vLDiG~G~G~~t~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~ 92 (232)
.+.....+++.+. +.++.+|||||||+|.++..+++. ..+|+|+|+++.+++.+++++...+++++++++.+|+.+++
T Consensus 30 ~~~~~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 109 (267)
T 3kkz_A 30 SPEVTLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLP 109 (267)
T ss_dssp CHHHHHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC
T ss_pred CHHHHHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCC
Confidence 4667777887776 678899999999999999999985 45999999999999999999998888778999999999887
Q ss_pred CC--CcceeecccCcc
Q 047897 93 FP--QFDLVVANIPYG 106 (232)
Q Consensus 93 ~~--~~D~Vi~n~p~~ 106 (232)
.+ +||+|+++.+++
T Consensus 110 ~~~~~fD~i~~~~~~~ 125 (267)
T 3kkz_A 110 FRNEELDLIWSEGAIY 125 (267)
T ss_dssp CCTTCEEEEEESSCGG
T ss_pred CCCCCEEEEEEcCCce
Confidence 53 799999876543
No 51
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.48 E-value=3.1e-13 Score=106.46 Aligned_cols=95 Identities=24% Similarity=0.283 Sum_probs=81.7
Q ss_pred CcccccCCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcC
Q 047897 8 KGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKD 87 (232)
Q Consensus 8 ~gq~fl~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D 87 (232)
.||+ ...+.+++.+++.+.+.++.+|||+|||+|.++..+++.+.+|+|+|+++.+++.+++++...+ +++++.+|
T Consensus 49 ~~~~-~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~v~~~~~d 124 (231)
T 1vbf_A 49 PGIN-TTALNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLSYYN---NIKLILGD 124 (231)
T ss_dssp TTEE-ECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHTTCS---SEEEEESC
T ss_pred CCCc-cCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHHhhcC---CeEEEECC
Confidence 4565 5568999999999998899999999999999999999977999999999999999999997654 69999999
Q ss_pred CCCC-C-CCCcceeecccCcc
Q 047897 88 ALKT-E-FPQFDLVVANIPYG 106 (232)
Q Consensus 88 ~~~~-~-~~~~D~Vi~n~p~~ 106 (232)
+.+. + ..+||+|+++.+++
T Consensus 125 ~~~~~~~~~~fD~v~~~~~~~ 145 (231)
T 1vbf_A 125 GTLGYEEEKPYDRVVVWATAP 145 (231)
T ss_dssp GGGCCGGGCCEEEEEESSBBS
T ss_pred cccccccCCCccEEEECCcHH
Confidence 9873 2 24799999876543
No 52
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=99.48 E-value=1.5e-13 Score=121.05 Aligned_cols=103 Identities=19% Similarity=0.213 Sum_probs=86.7
Q ss_pred cCCCcccccCCHHHHHHHHHhcC----CCCCCEEEEEcCCccHhHHHHHhc-----CCeEEEEEcCHHHHHHHHHHHhhc
Q 047897 5 HKSKGQHILTNQRVLDSIVRKSS----INPDDTVLEIGPGTGNLTLKLLEV-----SKKVHAIEIDERMVEILNRRAADS 75 (232)
Q Consensus 5 ~k~~gq~fl~~~~~~~~i~~~~~----~~~~~~vLDiG~G~G~~t~~l~~~-----~~~v~~vD~~~~~~~~a~~~~~~~ 75 (232)
.|+.|| |+|++.+++.|++.+. ..++.+|+|.+||+|.+...+++. ...++|+|+++.++..|+.++..+
T Consensus 193 ~k~~G~-fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~ 271 (542)
T 3lkd_A 193 GKKAGE-FYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILH 271 (542)
T ss_dssp --CCSS-CCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHT
T ss_pred cccCCe-ecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHc
Confidence 567788 7788999999999886 457889999999999998888773 568999999999999999999888
Q ss_pred CCC-ccEEEEEcCCCCC--C---CCCcceeecccCcccc
Q 047897 76 GFH-DRLNVISKDALKT--E---FPQFDLVVANIPYGIS 108 (232)
Q Consensus 76 ~~~-~~~~~~~~D~~~~--~---~~~~D~Vi~n~p~~~~ 108 (232)
|.. +++.+.++|.+.. + ...||+|++||||...
T Consensus 272 gi~~~~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~ 310 (542)
T 3lkd_A 272 GVPIENQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAK 310 (542)
T ss_dssp TCCGGGEEEEESCTTTSCSCCSSCCCBSEEEECCCTTCC
T ss_pred CCCcCccceEecceecccccccccccccEEEecCCcCCc
Confidence 875 4789999999876 3 2379999999999743
No 53
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.48 E-value=3e-13 Score=108.52 Aligned_cols=90 Identities=19% Similarity=0.383 Sum_probs=77.0
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC-
Q 047897 16 QRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP- 94 (232)
Q Consensus 16 ~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~- 94 (232)
..-++.+++.+...++.+|||+|||+|.++..+++...+|+|+|+++.+++.+++++...+. ++++++.+|+.+++++
T Consensus 23 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~l~~~~ 101 (260)
T 1vl5_A 23 GSDLAKLMQIAALKGNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGNGH-QQVEYVQGDAEQMPFTD 101 (260)
T ss_dssp CCCHHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEECCC-CCCSCT
T ss_pred HHHHHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCC-CceEEEEecHHhCCCCC
Confidence 34556777888888899999999999999999999778999999999999999999988776 4799999999988764
Q ss_pred -CcceeecccCcc
Q 047897 95 -QFDLVVANIPYG 106 (232)
Q Consensus 95 -~~D~Vi~n~p~~ 106 (232)
+||+|+++...+
T Consensus 102 ~~fD~V~~~~~l~ 114 (260)
T 1vl5_A 102 ERFHIVTCRIAAH 114 (260)
T ss_dssp TCEEEEEEESCGG
T ss_pred CCEEEEEEhhhhH
Confidence 799999975543
No 54
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=99.48 E-value=4.9e-13 Score=117.64 Aligned_cols=102 Identities=17% Similarity=0.269 Sum_probs=86.4
Q ss_pred cCCCcccccCCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc---------------CCeEEEEEcCHHHHHHHH
Q 047897 5 HKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV---------------SKKVHAIEIDERMVEILN 69 (232)
Q Consensus 5 ~k~~gq~fl~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~---------------~~~v~~vD~~~~~~~~a~ 69 (232)
+++.|| |+|++.+++.|++.+.+.++++|+|.+||+|.+...+.+. ...++|+|+++.++..|+
T Consensus 193 ~g~~Gq-fyTP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~ 271 (530)
T 3ufb_A 193 AGDSGE-FYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQ 271 (530)
T ss_dssp SSSCCC-CCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHH
T ss_pred cCcCce-ECCcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHH
Confidence 456788 7799999999999999999999999999999998777651 246999999999999999
Q ss_pred HHHhhcCCCccEEEEEcCCCCCCC------CCcceeecccCcccc
Q 047897 70 RRAADSGFHDRLNVISKDALKTEF------PQFDLVVANIPYGIS 108 (232)
Q Consensus 70 ~~~~~~~~~~~~~~~~~D~~~~~~------~~~D~Vi~n~p~~~~ 108 (232)
.++..+|. +...+.++|.+..+. ..||+|++||||+..
T Consensus 272 mNl~lhg~-~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~ 315 (530)
T 3ufb_A 272 MNLLLHGL-EYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGE 315 (530)
T ss_dssp HHHHHHTC-SCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCB
T ss_pred HHHHhcCC-ccccccccccccCchhhhcccccceEEEecCCCCcc
Confidence 99988887 356788999887643 269999999999754
No 55
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.48 E-value=9.9e-14 Score=107.57 Aligned_cols=88 Identities=14% Similarity=0.023 Sum_probs=71.4
Q ss_pred HHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcC-----------CCccEEEEEc
Q 047897 18 VLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSG-----------FHDRLNVISK 86 (232)
Q Consensus 18 ~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~-----------~~~~~~~~~~ 86 (232)
.+..+++.+.+.++.+|||+|||+|..+..+++.+.+|+|+|+|+.|++.|+++..... ...+++++++
T Consensus 10 ~l~~~~~~l~~~~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 89 (203)
T 1pjz_A 10 DLQQYWSSLNVVPGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCG 89 (203)
T ss_dssp HHHHHHHHHCCCTTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEE
T ss_pred HHHHHHHhcccCCCCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEEC
Confidence 34445566667788999999999999999999988999999999999999999875310 0147999999
Q ss_pred CCCCCCC---CCcceeecccCc
Q 047897 87 DALKTEF---PQFDLVVANIPY 105 (232)
Q Consensus 87 D~~~~~~---~~~D~Vi~n~p~ 105 (232)
|+.+++. ++||+|+++..+
T Consensus 90 d~~~l~~~~~~~fD~v~~~~~l 111 (203)
T 1pjz_A 90 DFFALTARDIGHCAAFYDRAAM 111 (203)
T ss_dssp CCSSSTHHHHHSEEEEEEESCG
T ss_pred ccccCCcccCCCEEEEEECcch
Confidence 9999875 379999986543
No 56
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.48 E-value=1.8e-13 Score=111.27 Aligned_cols=89 Identities=21% Similarity=0.237 Sum_probs=76.0
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCC-eEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC-
Q 047897 17 RVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSK-KVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP- 94 (232)
Q Consensus 17 ~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~- 94 (232)
.....+.+.+ .++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|++++..+++.++++++++|+.++...
T Consensus 114 ~~~~~l~~~~--~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~ 191 (278)
T 2frn_A 114 KERVRMAKVA--KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGEN 191 (278)
T ss_dssp HHHHHHHHHC--CTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCS
T ss_pred HHHHHHHHhC--CCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccC
Confidence 4455555554 4688999999999999999999655 69999999999999999999888866799999999988654
Q ss_pred CcceeecccCccc
Q 047897 95 QFDLVVANIPYGI 107 (232)
Q Consensus 95 ~~D~Vi~n~p~~~ 107 (232)
.||+|++|+|+..
T Consensus 192 ~fD~Vi~~~p~~~ 204 (278)
T 2frn_A 192 IADRILMGYVVRT 204 (278)
T ss_dssp CEEEEEECCCSSG
T ss_pred CccEEEECCchhH
Confidence 7999999999654
No 57
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.47 E-value=2.2e-13 Score=107.75 Aligned_cols=100 Identities=21% Similarity=0.323 Sum_probs=82.1
Q ss_pred CCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHh--cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCC
Q 047897 14 TNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLE--VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKT 91 (232)
Q Consensus 14 ~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~ 91 (232)
..+...+.+...+...++.+|||||||+|..+..++. .+.+|+++|+++.+++.|++++...++.++++++.+|+.+.
T Consensus 55 ~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 134 (232)
T 3ntv_A 55 VDRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQ 134 (232)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGC
T ss_pred cCHHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHH
Confidence 3467777776666666788999999999999999998 67899999999999999999999988866899999999875
Q ss_pred C----CCCcceeecccCcccchHHHH
Q 047897 92 E----FPQFDLVVANIPYGISSPLVA 113 (232)
Q Consensus 92 ~----~~~~D~Vi~n~p~~~~~~~l~ 113 (232)
. ..+||+|+++.+.......+.
T Consensus 135 ~~~~~~~~fD~V~~~~~~~~~~~~l~ 160 (232)
T 3ntv_A 135 FENVNDKVYDMIFIDAAKAQSKKFFE 160 (232)
T ss_dssp HHHHTTSCEEEEEEETTSSSHHHHHH
T ss_pred HHhhccCCccEEEEcCcHHHHHHHHH
Confidence 3 258999998876544444433
No 58
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.47 E-value=6.2e-14 Score=120.15 Aligned_cols=94 Identities=28% Similarity=0.346 Sum_probs=75.6
Q ss_pred ccCCCcccccCCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHh---cCCeEEEEEcCHHHHHHHHHHHhhcCCCcc
Q 047897 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLE---VSKKVHAIEIDERMVEILNRRAADSGFHDR 80 (232)
Q Consensus 4 ~~k~~gq~fl~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ 80 (232)
.++..|| |.+++.+++.|++.+...++.+|||+|||+|.++..+++ ...+++|+|+|+.+++.| .+
T Consensus 14 ~~~~~g~-~~TP~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----------~~ 82 (421)
T 2ih2_A 14 APRSLGR-VETPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----------PW 82 (421)
T ss_dssp --------CCCCHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----------TT
T ss_pred hcccCce-EeCCHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----------CC
Confidence 3567788 667899999999999866677999999999999999987 357999999999998776 35
Q ss_pred EEEEEcCCCCCCC-CCcceeecccCcccc
Q 047897 81 LNVISKDALKTEF-PQFDLVVANIPYGIS 108 (232)
Q Consensus 81 ~~~~~~D~~~~~~-~~~D~Vi~n~p~~~~ 108 (232)
++++++|+.+... +.||+|++|+||...
T Consensus 83 ~~~~~~D~~~~~~~~~fD~Ii~NPPy~~~ 111 (421)
T 2ih2_A 83 AEGILADFLLWEPGEAFDLILGNPPYGIV 111 (421)
T ss_dssp EEEEESCGGGCCCSSCEEEEEECCCCCCB
T ss_pred CcEEeCChhhcCccCCCCEEEECcCccCc
Confidence 8999999998764 489999999999754
No 59
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.47 E-value=5.3e-13 Score=106.66 Aligned_cols=92 Identities=23% Similarity=0.320 Sum_probs=78.6
Q ss_pred CHHHHHHHHHhc-CCCCCCEEEEEcCCccHhHHHHHhcC-CeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC
Q 047897 15 NQRVLDSIVRKS-SINPDDTVLEIGPGTGNLTLKLLEVS-KKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE 92 (232)
Q Consensus 15 ~~~~~~~i~~~~-~~~~~~~vLDiG~G~G~~t~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~ 92 (232)
.+.....+++.+ .+.++.+|||+|||+|.++..+++.. .+|+|+|+++.+++.+++++...++.++++++++|+.+++
T Consensus 30 ~~~~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 109 (257)
T 3f4k_A 30 SPEATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLP 109 (257)
T ss_dssp CHHHHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCS
T ss_pred CHHHHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCC
Confidence 356777777776 56778899999999999999999854 4999999999999999999999888777999999998887
Q ss_pred CC--CcceeecccCcc
Q 047897 93 FP--QFDLVVANIPYG 106 (232)
Q Consensus 93 ~~--~~D~Vi~n~p~~ 106 (232)
.+ +||+|+++..++
T Consensus 110 ~~~~~fD~v~~~~~l~ 125 (257)
T 3f4k_A 110 FQNEELDLIWSEGAIY 125 (257)
T ss_dssp SCTTCEEEEEEESCSC
T ss_pred CCCCCEEEEEecChHh
Confidence 54 799999875543
No 60
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.47 E-value=5.2e-14 Score=105.49 Aligned_cols=91 Identities=15% Similarity=0.211 Sum_probs=76.2
Q ss_pred CCHHHHHHHHHhcCC--CCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCC
Q 047897 14 TNQRVLDSIVRKSSI--NPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKT 91 (232)
Q Consensus 14 ~~~~~~~~i~~~~~~--~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~ 91 (232)
....+.+.+++.+.. .++.+|||+|||+|.++..+++.+..|+|+|+|+.+++.+++++...++ +++++++|+.+.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~ 100 (171)
T 1ws6_A 23 SPVRLRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGL--GARVVALPVEVF 100 (171)
T ss_dssp CCHHHHHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTC--CCEEECSCHHHH
T ss_pred CHHHHHHHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHcCC--ceEEEeccHHHH
Confidence 446677777776653 2678999999999999999999777799999999999999999988765 699999999874
Q ss_pred -C-----CCCcceeecccCcc
Q 047897 92 -E-----FPQFDLVVANIPYG 106 (232)
Q Consensus 92 -~-----~~~~D~Vi~n~p~~ 106 (232)
+ .++||+|++|+||+
T Consensus 101 ~~~~~~~~~~~D~i~~~~~~~ 121 (171)
T 1ws6_A 101 LPEAKAQGERFTVAFMAPPYA 121 (171)
T ss_dssp HHHHHHTTCCEEEEEECCCTT
T ss_pred HHhhhccCCceEEEEECCCCc
Confidence 2 12699999999985
No 61
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.47 E-value=1.6e-13 Score=115.71 Aligned_cols=94 Identities=15% Similarity=0.194 Sum_probs=78.7
Q ss_pred CCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHh-cCC-eEEEEEcCHHHHHHHHHHH-------hhcCC-CccEEE
Q 047897 14 TNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLE-VSK-KVHAIEIDERMVEILNRRA-------ADSGF-HDRLNV 83 (232)
Q Consensus 14 ~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~-~~~-~v~~vD~~~~~~~~a~~~~-------~~~~~-~~~~~~ 83 (232)
+.+..+..+++.+++.++++|||||||+|.++..++. .+. +|+|||+++.+++.|+++. ...|+ .+++++
T Consensus 157 t~~~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVef 236 (438)
T 3uwp_A 157 TSFDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTL 236 (438)
T ss_dssp THHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEE
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEE
Confidence 4578899999999999999999999999999999886 344 6999999999999998864 33454 258999
Q ss_pred EEcCCCCCCC----CCcceeecccCccc
Q 047897 84 ISKDALKTEF----PQFDLVVANIPYGI 107 (232)
Q Consensus 84 ~~~D~~~~~~----~~~D~Vi~n~p~~~ 107 (232)
+++|+.+.++ ..+|+|++|.+|..
T Consensus 237 i~GD~~~lp~~d~~~~aDVVf~Nn~~F~ 264 (438)
T 3uwp_A 237 ERGDFLSEEWRERIANTSVIFVNNFAFG 264 (438)
T ss_dssp EECCTTSHHHHHHHHTCSEEEECCTTCC
T ss_pred EECcccCCccccccCCccEEEEcccccC
Confidence 9999999875 36899999987653
No 62
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.46 E-value=5.7e-13 Score=101.40 Aligned_cols=104 Identities=21% Similarity=0.274 Sum_probs=87.5
Q ss_pred cCCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCC-C
Q 047897 13 LTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALK-T 91 (232)
Q Consensus 13 l~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~-~ 91 (232)
...+.+...+++.+.+.++.+|||+|||+|.++..+++...+|+++|+++.+++.+++++...+..++++++++|+.+ +
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 95 (192)
T 1l3i_A 16 PTAMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEAL 95 (192)
T ss_dssp CCCHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHH
T ss_pred CChHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhc
Confidence 456788888899888889999999999999999999987799999999999999999999888775689999999877 3
Q ss_pred CC-CCcceeecccCcccchHHHHHHh
Q 047897 92 EF-PQFDLVVANIPYGISSPLVAKLV 116 (232)
Q Consensus 92 ~~-~~~D~Vi~n~p~~~~~~~l~~~~ 116 (232)
+. +.||+|+++.+++.....+..+.
T Consensus 96 ~~~~~~D~v~~~~~~~~~~~~l~~~~ 121 (192)
T 1l3i_A 96 CKIPDIDIAVVGGSGGELQEILRIIK 121 (192)
T ss_dssp TTSCCEEEEEESCCTTCHHHHHHHHH
T ss_pred ccCCCCCEEEECCchHHHHHHHHHHH
Confidence 32 47999999888665555554443
No 63
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.46 E-value=1.9e-13 Score=105.03 Aligned_cols=81 Identities=22% Similarity=0.336 Sum_probs=70.4
Q ss_pred hcCCCCCCEEEEEcCCccHhHHHHHhc---CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC---CCCcce
Q 047897 25 KSSINPDDTVLEIGPGTGNLTLKLLEV---SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE---FPQFDL 98 (232)
Q Consensus 25 ~~~~~~~~~vLDiG~G~G~~t~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~---~~~~D~ 98 (232)
...+.++.+|||+|||+|.++..+++. ..+|+|+|+++.+++.|++++...++.++++++++|+.+++ .++||+
T Consensus 17 ~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~ 96 (197)
T 3eey_A 17 KMFVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKA 96 (197)
T ss_dssp HHHCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEE
T ss_pred HhcCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceE
Confidence 334568889999999999999999884 36999999999999999999998887668999999988764 247999
Q ss_pred eecccCc
Q 047897 99 VVANIPY 105 (232)
Q Consensus 99 Vi~n~p~ 105 (232)
|++|+||
T Consensus 97 v~~~~~~ 103 (197)
T 3eey_A 97 VMFNLGY 103 (197)
T ss_dssp EEEEESB
T ss_pred EEEcCCc
Confidence 9999987
No 64
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.45 E-value=4.5e-13 Score=107.14 Aligned_cols=92 Identities=28% Similarity=0.396 Sum_probs=81.3
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc---CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC
Q 047897 16 QRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV---SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE 92 (232)
Q Consensus 16 ~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~ 92 (232)
+..+..++..+++.++.+|||+|||+|.++..+++. ..+|+++|+++.+++.|++++...+++++++++++|+.+..
T Consensus 79 ~~~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 158 (255)
T 3mb5_A 79 PKDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGI 158 (255)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCC
T ss_pred HhHHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhcc
Confidence 567778889999999999999999999999999985 78999999999999999999998888666999999998753
Q ss_pred -CCCcceeecccCccc
Q 047897 93 -FPQFDLVVANIPYGI 107 (232)
Q Consensus 93 -~~~~D~Vi~n~p~~~ 107 (232)
..+||+|++|+|...
T Consensus 159 ~~~~~D~v~~~~~~~~ 174 (255)
T 3mb5_A 159 EEENVDHVILDLPQPE 174 (255)
T ss_dssp CCCSEEEEEECSSCGG
T ss_pred CCCCcCEEEECCCCHH
Confidence 237999999988654
No 65
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.45 E-value=3.2e-13 Score=105.01 Aligned_cols=89 Identities=24% Similarity=0.444 Sum_probs=77.7
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc-CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC
Q 047897 16 QRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV-SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP 94 (232)
Q Consensus 16 ~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~ 94 (232)
+.+.+.+++.+...++ +|||+|||+|.++..+++. +.+++|+|+++.+++.+++++...+..++++++++|+.+++.+
T Consensus 30 ~~~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 108 (219)
T 3dlc_A 30 PIIAENIINRFGITAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIE 108 (219)
T ss_dssp HHHHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSC
T ss_pred HHHHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCC
Confidence 5677888888877666 9999999999999999984 7799999999999999999999888767899999999987754
Q ss_pred --CcceeecccCc
Q 047897 95 --QFDLVVANIPY 105 (232)
Q Consensus 95 --~~D~Vi~n~p~ 105 (232)
+||+|+++..+
T Consensus 109 ~~~~D~v~~~~~l 121 (219)
T 3dlc_A 109 DNYADLIVSRGSV 121 (219)
T ss_dssp TTCEEEEEEESCG
T ss_pred cccccEEEECchH
Confidence 79999997653
No 66
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.45 E-value=2.2e-13 Score=110.26 Aligned_cols=87 Identities=21% Similarity=0.233 Sum_probs=75.9
Q ss_pred HHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcC-CeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC-Ccc
Q 047897 20 DSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVS-KKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP-QFD 97 (232)
Q Consensus 20 ~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~-~~D 97 (232)
.++.+.. .+|++|||+|||+|.++..++..+ .+|+|+|+|+.+++.+++|+..+++.++++++++|+.++... .||
T Consensus 117 ~ri~~~~--~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~D 194 (278)
T 3k6r_A 117 VRMAKVA--KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIAD 194 (278)
T ss_dssp HHHHHHC--CTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEE
T ss_pred HHHHHhc--CCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccCCC
Confidence 3455554 579999999999999999999854 699999999999999999999999988899999999988654 799
Q ss_pred eeecccCcccc
Q 047897 98 LVVANIPYGIS 108 (232)
Q Consensus 98 ~Vi~n~p~~~~ 108 (232)
.|+.|+|+...
T Consensus 195 ~Vi~~~p~~~~ 205 (278)
T 3k6r_A 195 RILMGYVVRTH 205 (278)
T ss_dssp EEEECCCSSGG
T ss_pred EEEECCCCcHH
Confidence 99999987654
No 67
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.45 E-value=7.5e-13 Score=104.98 Aligned_cols=88 Identities=20% Similarity=0.434 Sum_probs=78.3
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC-
Q 047897 16 QRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP- 94 (232)
Q Consensus 16 ~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~- 94 (232)
+.....+++.+++.++.+|||+|||+|.++..+++.+.+|+|+|+++.+++.+++++...+. ++++++.+|+.+++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~ 85 (239)
T 1xxl_A 7 HHSLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEKGV-ENVRFQQGTAESLPFPD 85 (239)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTC-CSEEEEECBTTBCCSCT
T ss_pred CCCcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCC-CCeEEEecccccCCCCC
Confidence 55667788888999999999999999999999999888999999999999999999988776 4799999999988764
Q ss_pred -CcceeecccC
Q 047897 95 -QFDLVVANIP 104 (232)
Q Consensus 95 -~~D~Vi~n~p 104 (232)
+||+|+++..
T Consensus 86 ~~fD~v~~~~~ 96 (239)
T 1xxl_A 86 DSFDIITCRYA 96 (239)
T ss_dssp TCEEEEEEESC
T ss_pred CcEEEEEECCc
Confidence 7999998754
No 68
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.45 E-value=1.6e-14 Score=112.20 Aligned_cols=91 Identities=16% Similarity=0.298 Sum_probs=58.0
Q ss_pred HHHHHHHHhcCC-CCCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC-
Q 047897 17 RVLDSIVRKSSI-NPDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE- 92 (232)
Q Consensus 17 ~~~~~i~~~~~~-~~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~- 92 (232)
.+++.+++.+.. .++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.+++++...+. +++++++|+.+..
T Consensus 16 ~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~ 93 (215)
T 4dzr_A 16 VLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA--VVDWAAADGIEWLI 93 (215)
T ss_dssp HHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC---------------------CCHHHHHHHHH
T ss_pred HHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC--ceEEEEcchHhhhh
Confidence 355666666654 67889999999999999999995 56999999999999999999987764 6899999998732
Q ss_pred C-----CCcceeecccCcccch
Q 047897 93 F-----PQFDLVVANIPYGISS 109 (232)
Q Consensus 93 ~-----~~~D~Vi~n~p~~~~~ 109 (232)
. .+||+|++|+||+...
T Consensus 94 ~~~~~~~~fD~i~~npp~~~~~ 115 (215)
T 4dzr_A 94 ERAERGRPWHAIVSNPPYIPTG 115 (215)
T ss_dssp HHHHTTCCBSEEEECCCCCC--
T ss_pred hhhhccCcccEEEECCCCCCCc
Confidence 2 5799999999997664
No 69
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.45 E-value=3.2e-13 Score=104.50 Aligned_cols=80 Identities=28% Similarity=0.346 Sum_probs=70.3
Q ss_pred CCCCCEEEEEcCCccHhHHHHHhcC-CeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCCCcceeecccCcc
Q 047897 28 INPDDTVLEIGPGTGNLTLKLLEVS-KKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYG 106 (232)
Q Consensus 28 ~~~~~~vLDiG~G~G~~t~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vi~n~p~~ 106 (232)
+.++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|++++...+.. +++++.+|+.+...++||+|+++.+++
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~fD~i~~~~~~~ 136 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIY-DIALQKTSLLADVDGKFDLIVANILAE 136 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC-CCEEEESSTTTTCCSCEEEEEEESCHH
T ss_pred ccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeccccccCCCCceEEEECCcHH
Confidence 4578899999999999999998854 59999999999999999999988774 499999999987767999999998875
Q ss_pred cc
Q 047897 107 IS 108 (232)
Q Consensus 107 ~~ 108 (232)
..
T Consensus 137 ~~ 138 (205)
T 3grz_A 137 IL 138 (205)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 70
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.45 E-value=6.6e-13 Score=109.50 Aligned_cols=86 Identities=20% Similarity=0.291 Sum_probs=75.4
Q ss_pred HHHHHHhcC-CCCCCEEEEEcCCccHhHHHHHhc-CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC--
Q 047897 19 LDSIVRKSS-INPDDTVLEIGPGTGNLTLKLLEV-SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP-- 94 (232)
Q Consensus 19 ~~~i~~~~~-~~~~~~vLDiG~G~G~~t~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~-- 94 (232)
.+.+++.+. +.++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.+++++...++.++++++.+|+.+.+++
T Consensus 105 ~~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 184 (312)
T 3vc1_A 105 AEFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKG 184 (312)
T ss_dssp HHHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTT
T ss_pred HHHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCC
Confidence 344667776 778999999999999999999986 8899999999999999999999988867899999999988754
Q ss_pred CcceeecccC
Q 047897 95 QFDLVVANIP 104 (232)
Q Consensus 95 ~~D~Vi~n~p 104 (232)
.||+|+++-.
T Consensus 185 ~fD~V~~~~~ 194 (312)
T 3vc1_A 185 AVTASWNNES 194 (312)
T ss_dssp CEEEEEEESC
T ss_pred CEeEEEECCc
Confidence 8999998643
No 71
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.45 E-value=4.5e-13 Score=113.24 Aligned_cols=91 Identities=19% Similarity=0.226 Sum_probs=75.5
Q ss_pred HHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhhcCCCc--cEEEEEcCCCCCCC
Q 047897 18 VLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAADSGFHD--RLNVISKDALKTEF 93 (232)
Q Consensus 18 ~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~--~~~~~~~D~~~~~~ 93 (232)
..+.+++.+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++..+++.+ +++++.+|+.+...
T Consensus 210 ~~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~ 289 (375)
T 4dcm_A 210 GARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVE 289 (375)
T ss_dssp HHHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCC
T ss_pred HHHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCC
Confidence 3445677887777789999999999999999984 6899999999999999999999887632 58999999988433
Q ss_pred -CCcceeecccCcccc
Q 047897 94 -PQFDLVVANIPYGIS 108 (232)
Q Consensus 94 -~~~D~Vi~n~p~~~~ 108 (232)
.+||+|++|+||+..
T Consensus 290 ~~~fD~Ii~nppfh~~ 305 (375)
T 4dcm_A 290 PFRFNAVLCNPPFHQQ 305 (375)
T ss_dssp TTCEEEEEECCCC---
T ss_pred CCCeeEEEECCCcccC
Confidence 389999999999754
No 72
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.45 E-value=6e-13 Score=110.09 Aligned_cols=92 Identities=18% Similarity=0.299 Sum_probs=80.2
Q ss_pred CCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcC---CeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCC
Q 047897 14 TNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVS---KKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALK 90 (232)
Q Consensus 14 ~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~ 90 (232)
..+.+.+.+++.+.+.++++|||||||+|.++..+++.+ .+|+|+|+|+++++.+++++...++ ++++++.+|+.+
T Consensus 59 ~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~-~~v~~~~~d~~~ 137 (317)
T 1dl5_A 59 SQPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGI-ENVIFVCGDGYY 137 (317)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEESCGGG
T ss_pred cCHHHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCC-CCeEEEECChhh
Confidence 357899999999999999999999999999999999843 4599999999999999999998887 469999999988
Q ss_pred CCC--CCcceeecccCcc
Q 047897 91 TEF--PQFDLVVANIPYG 106 (232)
Q Consensus 91 ~~~--~~~D~Vi~n~p~~ 106 (232)
... .+||+|+++.+.+
T Consensus 138 ~~~~~~~fD~Iv~~~~~~ 155 (317)
T 1dl5_A 138 GVPEFSPYDVIFVTVGVD 155 (317)
T ss_dssp CCGGGCCEEEEEECSBBS
T ss_pred ccccCCCeEEEEEcCCHH
Confidence 543 4799999987654
No 73
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.44 E-value=8.2e-13 Score=102.90 Aligned_cols=93 Identities=22% Similarity=0.274 Sum_probs=79.8
Q ss_pred cCCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcC---CeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCC
Q 047897 13 LTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVS---KKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDAL 89 (232)
Q Consensus 13 l~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~ 89 (232)
+..+.+...+++.+.+.++.+|||+|||+|.++..+++.. .+|+++|+++.+++.+++++...+. ++++++.+|+.
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~ 138 (215)
T 2yxe_A 60 ISAIHMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGY-DNVIVIVGDGT 138 (215)
T ss_dssp ECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTC-TTEEEEESCGG
T ss_pred eCcHHHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC-CCeEEEECCcc
Confidence 3558899999999988899999999999999999999843 7999999999999999999988776 46999999986
Q ss_pred CCC--CCCcceeecccCcc
Q 047897 90 KTE--FPQFDLVVANIPYG 106 (232)
Q Consensus 90 ~~~--~~~~D~Vi~n~p~~ 106 (232)
... ..+||+|+++.+++
T Consensus 139 ~~~~~~~~fD~v~~~~~~~ 157 (215)
T 2yxe_A 139 LGYEPLAPYDRIYTTAAGP 157 (215)
T ss_dssp GCCGGGCCEEEEEESSBBS
T ss_pred cCCCCCCCeeEEEECCchH
Confidence 543 24799999886644
No 74
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.44 E-value=1.9e-13 Score=113.71 Aligned_cols=95 Identities=14% Similarity=0.149 Sum_probs=76.1
Q ss_pred ccCCHHHHHHHHHhcC-CCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCc-cEEEEEcCCC
Q 047897 12 ILTNQRVLDSIVRKSS-INPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHD-RLNVISKDAL 89 (232)
Q Consensus 12 fl~~~~~~~~i~~~~~-~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-~~~~~~~D~~ 89 (232)
|+..+...+.+.+.+. ..++.+|||+|||+|.++..++..+.+|+++|+|+.+++.|++++..+++.+ +++++++|+.
T Consensus 134 f~dq~~~~~~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~ 213 (332)
T 2igt_A 134 FPEQIVHWEWLKNAVETADRPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAM 213 (332)
T ss_dssp CGGGHHHHHHHHHHHHHSSSCCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHH
T ss_pred chHHHHHHHHHHHHHHhcCCCCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHH
Confidence 3333344444555443 3467899999999999999999977799999999999999999999888754 5999999998
Q ss_pred CCC------CCCcceeecccCcc
Q 047897 90 KTE------FPQFDLVVANIPYG 106 (232)
Q Consensus 90 ~~~------~~~~D~Vi~n~p~~ 106 (232)
++. ...||+|++|+|+.
T Consensus 214 ~~l~~~~~~~~~fD~Ii~dPP~~ 236 (332)
T 2igt_A 214 KFIQREERRGSTYDIILTDPPKF 236 (332)
T ss_dssp HHHHHHHHHTCCBSEEEECCCSE
T ss_pred HHHHHHHhcCCCceEEEECCccc
Confidence 753 24799999999963
No 75
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.44 E-value=2e-13 Score=111.85 Aligned_cols=94 Identities=13% Similarity=0.267 Sum_probs=81.8
Q ss_pred ccCCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCC
Q 047897 12 ILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDAL 89 (232)
Q Consensus 12 fl~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~ 89 (232)
+.+.+.+++.+++.+.+.++.+|||+|||+|..+..+++. +.+|+|+|+|+.+++.|++++...+ ++++++++|+.
T Consensus 8 ~~h~pvLl~e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g--~~v~~v~~d~~ 85 (301)
T 1m6y_A 8 QRHIPVMVREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS--DRVSLFKVSYR 85 (301)
T ss_dssp SSCCCTTHHHHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT--TTEEEEECCGG
T ss_pred ccccHHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCHH
Confidence 3455778899999999889999999999999999999984 5899999999999999999998876 58999999998
Q ss_pred CCCC-------CCcceeecccCccc
Q 047897 90 KTEF-------PQFDLVVANIPYGI 107 (232)
Q Consensus 90 ~~~~-------~~~D~Vi~n~p~~~ 107 (232)
+++. ..||.|++|+|+..
T Consensus 86 ~l~~~l~~~g~~~~D~Vl~D~gvSs 110 (301)
T 1m6y_A 86 EADFLLKTLGIEKVDGILMDLGVST 110 (301)
T ss_dssp GHHHHHHHTTCSCEEEEEEECSCCH
T ss_pred HHHHHHHhcCCCCCCEEEEcCccch
Confidence 7641 47999999998643
No 76
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.43 E-value=9.4e-13 Score=107.08 Aligned_cols=87 Identities=17% Similarity=0.216 Sum_probs=76.6
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHh-cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCCC
Q 047897 17 RVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLE-VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFPQ 95 (232)
Q Consensus 17 ~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~~ 95 (232)
..++.+++.+++.++.+|||||||+|.++..+++ .+.+|+|+|+|+.+++.+++++...+..++++++.+|+.+++ ++
T Consensus 51 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~ 129 (287)
T 1kpg_A 51 AKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD-EP 129 (287)
T ss_dssp HHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC-CC
T ss_pred HHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC-CC
Confidence 3566777888888899999999999999999995 677999999999999999999988877678999999998887 78
Q ss_pred cceeecccC
Q 047897 96 FDLVVANIP 104 (232)
Q Consensus 96 ~D~Vi~n~p 104 (232)
||+|+++-.
T Consensus 130 fD~v~~~~~ 138 (287)
T 1kpg_A 130 VDRIVSIGA 138 (287)
T ss_dssp CSEEEEESC
T ss_pred eeEEEEeCc
Confidence 999998643
No 77
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.43 E-value=7.9e-13 Score=111.88 Aligned_cols=88 Identities=24% Similarity=0.386 Sum_probs=74.9
Q ss_pred HHHHHHHhcC--CCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC-
Q 047897 18 VLDSIVRKSS--INPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP- 94 (232)
Q Consensus 18 ~~~~i~~~~~--~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~- 94 (232)
+++.+.+.+. ..++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.+++++...++. ++++.+|+.+...+
T Consensus 219 ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n~~~~~~~--v~~~~~D~~~~~~~~ 296 (381)
T 3dmg_A 219 LLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGLEANALK--AQALHSDVDEALTEE 296 (381)
T ss_dssp HHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHHHHHTTCC--CEEEECSTTTTSCTT
T ss_pred HHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCC--eEEEEcchhhccccC
Confidence 4445544442 346789999999999999999998889999999999999999999988753 89999999987654
Q ss_pred -CcceeecccCccc
Q 047897 95 -QFDLVVANIPYGI 107 (232)
Q Consensus 95 -~~D~Vi~n~p~~~ 107 (232)
+||+|++|+||+.
T Consensus 297 ~~fD~Ii~npp~~~ 310 (381)
T 3dmg_A 297 ARFDIIVTNPPFHV 310 (381)
T ss_dssp CCEEEEEECCCCCT
T ss_pred CCeEEEEECCchhh
Confidence 8999999999986
No 78
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.43 E-value=1e-12 Score=112.64 Aligned_cols=94 Identities=19% Similarity=0.256 Sum_probs=77.1
Q ss_pred CCHHHHHHHHHhcC-CCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC
Q 047897 14 TNQRVLDSIVRKSS-INPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE 92 (232)
Q Consensus 14 ~~~~~~~~i~~~~~-~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~ 92 (232)
.++...+.+.+.+. +.++.+|||+|||+|.++..+++.+.+|+|+|+++.+++.|++++..+++. ++++.+|+.+..
T Consensus 273 ~n~~~~e~l~~~~~~~~~~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~n~~~ngl~--v~~~~~d~~~~~ 350 (425)
T 2jjq_A 273 TNSYQAVNLVRKVSELVEGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEINNVD--AEFEVASDREVS 350 (425)
T ss_dssp SBHHHHHHHHHHHHHHCCSSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCC--EEEEECCTTTCC
T ss_pred cCHHHHHHHHHHhhccCCCCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChHHcC
Confidence 44555444433221 457889999999999999999998889999999999999999999988873 999999999876
Q ss_pred CCCcceeecccCcccch
Q 047897 93 FPQFDLVVANIPYGISS 109 (232)
Q Consensus 93 ~~~~D~Vi~n~p~~~~~ 109 (232)
...||+|++|+|+....
T Consensus 351 ~~~fD~Vv~dPPr~g~~ 367 (425)
T 2jjq_A 351 VKGFDTVIVDPPRAGLH 367 (425)
T ss_dssp CTTCSEEEECCCTTCSC
T ss_pred ccCCCEEEEcCCccchH
Confidence 55899999999975443
No 79
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.43 E-value=4e-13 Score=112.04 Aligned_cols=78 Identities=21% Similarity=0.344 Sum_probs=71.2
Q ss_pred CCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCCCcceeecccCcccc
Q 047897 29 NPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGIS 108 (232)
Q Consensus 29 ~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vi~n~p~~~~ 108 (232)
.++.+|||+|||+|.++.. ++.+.+|+|+|+|+.+++.+++++..+++.++++++++|+.+.. ..||+|++|+|+...
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~-~~fD~Vi~dpP~~~~ 271 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD-VKGNRVIMNLPKFAH 271 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC-CCEEEEEECCTTTGG
T ss_pred CCCCEEEEccCccCHHHHh-ccCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc-CCCcEEEECCcHhHH
Confidence 4788999999999999999 88778999999999999999999999988668999999999887 789999999997643
No 80
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.43 E-value=2.6e-13 Score=106.40 Aligned_cols=97 Identities=12% Similarity=0.144 Sum_probs=76.9
Q ss_pred ccCCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHh---cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCC
Q 047897 12 ILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLE---VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDA 88 (232)
Q Consensus 12 fl~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~ 88 (232)
+...+...+.+...+...++.+|||||||+|..+..+++ .+.+|+++|+++.+++.|++++...++.++++++++|+
T Consensus 40 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 119 (221)
T 3u81_A 40 MNVGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGAS 119 (221)
T ss_dssp GGCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCH
T ss_pred cccCHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCH
Confidence 345556555555555555678999999999999999998 26899999999999999999999988866899999998
Q ss_pred CCC----CC----CCcceeecccCcccc
Q 047897 89 LKT----EF----PQFDLVVANIPYGIS 108 (232)
Q Consensus 89 ~~~----~~----~~~D~Vi~n~p~~~~ 108 (232)
.+. +. .+||+|+++.+.+..
T Consensus 120 ~~~l~~~~~~~~~~~fD~V~~d~~~~~~ 147 (221)
T 3u81_A 120 QDLIPQLKKKYDVDTLDMVFLDHWKDRY 147 (221)
T ss_dssp HHHGGGTTTTSCCCCCSEEEECSCGGGH
T ss_pred HHHHHHHHHhcCCCceEEEEEcCCcccc
Confidence 552 11 479999998654443
No 81
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.42 E-value=1.3e-12 Score=106.72 Aligned_cols=89 Identities=13% Similarity=0.201 Sum_probs=77.8
Q ss_pred HHHHHHHHHhc----CCCCCCEEEEEcCCccHhHHHHHhc-CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCC
Q 047897 16 QRVLDSIVRKS----SINPDDTVLEIGPGTGNLTLKLLEV-SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALK 90 (232)
Q Consensus 16 ~~~~~~i~~~~----~~~~~~~vLDiG~G~G~~t~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~ 90 (232)
...++.+++.+ .+.++.+|||||||+|.++..+++. +.+|+|+|+++.+++.++++....++.++++++.+|+.+
T Consensus 64 ~~~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 143 (297)
T 2o57_A 64 LRTDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLE 143 (297)
T ss_dssp HHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTS
T ss_pred HHHHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCccc
Confidence 44667777877 7788999999999999999999985 789999999999999999999888876789999999999
Q ss_pred CCCC--CcceeecccC
Q 047897 91 TEFP--QFDLVVANIP 104 (232)
Q Consensus 91 ~~~~--~~D~Vi~n~p 104 (232)
++++ +||+|+++-.
T Consensus 144 ~~~~~~~fD~v~~~~~ 159 (297)
T 2o57_A 144 IPCEDNSYDFIWSQDA 159 (297)
T ss_dssp CSSCTTCEEEEEEESC
T ss_pred CCCCCCCEeEEEecch
Confidence 8764 7999998643
No 82
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.42 E-value=1.2e-12 Score=108.18 Aligned_cols=87 Identities=17% Similarity=0.161 Sum_probs=77.3
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc-CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCCC
Q 047897 17 RVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV-SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFPQ 95 (232)
Q Consensus 17 ~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~~ 95 (232)
..++.+++.+++.++.+|||||||+|.++..+++. +.+|+|+|+++.+++.++++....++.++++++.+|+.+++ .+
T Consensus 77 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~ 155 (318)
T 2fk8_A 77 AKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA-EP 155 (318)
T ss_dssp HHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC-CC
T ss_pred HHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC-CC
Confidence 45677788888888999999999999999999985 88999999999999999999998887668999999998886 68
Q ss_pred cceeecccC
Q 047897 96 FDLVVANIP 104 (232)
Q Consensus 96 ~D~Vi~n~p 104 (232)
||+|+++..
T Consensus 156 fD~v~~~~~ 164 (318)
T 2fk8_A 156 VDRIVSIEA 164 (318)
T ss_dssp CSEEEEESC
T ss_pred cCEEEEeCh
Confidence 999998754
No 83
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.42 E-value=3.2e-13 Score=108.42 Aligned_cols=84 Identities=21% Similarity=0.296 Sum_probs=70.8
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC-
Q 047897 16 QRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP- 94 (232)
Q Consensus 16 ~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~- 94 (232)
+.+.+.+.+... .+.+|||||||+|.++..+++.+.+|+|+|+|+.|++.|+++ ++++++++|+++++++
T Consensus 27 ~~l~~~l~~~~~--~~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml~~a~~~-------~~v~~~~~~~e~~~~~~ 97 (257)
T 4hg2_A 27 RALFRWLGEVAP--ARGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQIRQALRH-------PRVTYAVAPAEDTGLPP 97 (257)
T ss_dssp HHHHHHHHHHSS--CSSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHHHTCCCC-------TTEEEEECCTTCCCCCS
T ss_pred HHHHHHHHHhcC--CCCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhhhhhhhc-------CCceeehhhhhhhcccC
Confidence 567777777664 456899999999999999999999999999999999877542 5799999999998765
Q ss_pred -CcceeecccCcccc
Q 047897 95 -QFDLVVANIPYGIS 108 (232)
Q Consensus 95 -~~D~Vi~n~p~~~~ 108 (232)
+||+|++...+|+.
T Consensus 98 ~sfD~v~~~~~~h~~ 112 (257)
T 4hg2_A 98 ASVDVAIAAQAMHWF 112 (257)
T ss_dssp SCEEEEEECSCCTTC
T ss_pred CcccEEEEeeehhHh
Confidence 79999998766655
No 84
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.42 E-value=3e-13 Score=108.71 Aligned_cols=94 Identities=19% Similarity=0.253 Sum_probs=78.1
Q ss_pred cCCCcccccCCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEE
Q 047897 5 HKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVI 84 (232)
Q Consensus 5 ~k~~gq~fl~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~ 84 (232)
...|.+....++.+.+.+++.+...++.+|||||||+|.++..+++.+.+|+|+|+|+.+++.++++. +++++
T Consensus 9 a~~y~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~-------~~~~~ 81 (261)
T 3ege_A 9 GKQYSQTRVPDIRIVNAIINLLNLPKGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQAVVHP-------QVEWF 81 (261)
T ss_dssp ----CCSBCCCHHHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSSCCCT-------TEEEE
T ss_pred HHHHhhcccccHHHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHHHHHhcc-------CCEEE
Confidence 34455556667889999999998888999999999999999999998899999999999998776553 69999
Q ss_pred EcCCCCCCCC--CcceeecccCc
Q 047897 85 SKDALKTEFP--QFDLVVANIPY 105 (232)
Q Consensus 85 ~~D~~~~~~~--~~D~Vi~n~p~ 105 (232)
.+|+.+++++ +||+|+++..+
T Consensus 82 ~~d~~~~~~~~~~fD~v~~~~~l 104 (261)
T 3ege_A 82 TGYAENLALPDKSVDGVISILAI 104 (261)
T ss_dssp CCCTTSCCSCTTCBSEEEEESCG
T ss_pred ECchhhCCCCCCCEeEEEEcchH
Confidence 9999988764 79999987653
No 85
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.42 E-value=4.9e-13 Score=104.22 Aligned_cols=87 Identities=23% Similarity=0.221 Sum_probs=72.7
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCC-CC
Q 047897 17 RVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEF-PQ 95 (232)
Q Consensus 17 ~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~-~~ 95 (232)
.....+...+...++.+|||+|||+|.++..+++.+.+|+|+|+++.+++.++++.... ++++++++|+.+.+. .+
T Consensus 38 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~~~ 114 (216)
T 3ofk_A 38 RHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKRW---SHISWAATDILQFSTAEL 114 (216)
T ss_dssp HHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTTTC---SSEEEEECCTTTCCCSCC
T ss_pred HHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhcccC---CCeEEEEcchhhCCCCCC
Confidence 44444555666677889999999999999999998889999999999999999998764 479999999999874 38
Q ss_pred cceeecccCcc
Q 047897 96 FDLVVANIPYG 106 (232)
Q Consensus 96 ~D~Vi~n~p~~ 106 (232)
||+|+++..++
T Consensus 115 fD~v~~~~~l~ 125 (216)
T 3ofk_A 115 FDLIVVAEVLY 125 (216)
T ss_dssp EEEEEEESCGG
T ss_pred ccEEEEccHHH
Confidence 99999976544
No 86
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.42 E-value=1.3e-13 Score=110.19 Aligned_cols=92 Identities=21% Similarity=0.295 Sum_probs=72.1
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc----CCeEEEEEcCHHHHHHHHHHHhhc---CCCcc---------
Q 047897 17 RVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV----SKKVHAIEIDERMVEILNRRAADS---GFHDR--------- 80 (232)
Q Consensus 17 ~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~----~~~v~~vD~~~~~~~~a~~~~~~~---~~~~~--------- 80 (232)
.+++.+++.+...++.+|||+|||+|.++..++.. +.+|+|+|+|+.+++.|++++... ++..+
T Consensus 38 ~l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~ 117 (250)
T 1o9g_A 38 EIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSE 117 (250)
T ss_dssp HHHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhh
Confidence 45555555554446779999999999999999875 578999999999999999988765 33222
Q ss_pred ----------------EE-------------EEEcCCCCCC------CC-CcceeecccCcccc
Q 047897 81 ----------------LN-------------VISKDALKTE------FP-QFDLVVANIPYGIS 108 (232)
Q Consensus 81 ----------------~~-------------~~~~D~~~~~------~~-~~D~Vi~n~p~~~~ 108 (232)
++ ++++|+.+.. .. +||+|++|+||...
T Consensus 118 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~ 181 (250)
T 1o9g_A 118 RFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGER 181 (250)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGS
T ss_pred hcccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeecc
Confidence 66 9999998854 33 79999999998644
No 87
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.42 E-value=7.2e-13 Score=104.08 Aligned_cols=76 Identities=14% Similarity=0.222 Sum_probs=66.2
Q ss_pred CCCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC--Ccceee-ccc
Q 047897 29 NPDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP--QFDLVV-ANI 103 (232)
Q Consensus 29 ~~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~--~~D~Vi-~n~ 103 (232)
.++++|+|||||+|.++..++.. ..+|+|+|+++.+++.|++|+..+|+.++++++.+|.++...+ +||+|+ +++
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGm 99 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGM 99 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCC
Confidence 47789999999999999999984 4589999999999999999999999877899999999987654 699755 554
Q ss_pred C
Q 047897 104 P 104 (232)
Q Consensus 104 p 104 (232)
-
T Consensus 100 G 100 (230)
T 3lec_A 100 G 100 (230)
T ss_dssp C
T ss_pred c
Confidence 3
No 88
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.42 E-value=1.6e-12 Score=99.73 Aligned_cols=85 Identities=18% Similarity=0.275 Sum_probs=73.1
Q ss_pred HHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCC-CCccee
Q 047897 21 SIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEF-PQFDLV 99 (232)
Q Consensus 21 ~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~-~~~D~V 99 (232)
.+++.++..++.+|||+|||+|.++..+++.+.+++|+|+++.+++.+++++...+. ++++++.+|+.+.+. .+||+|
T Consensus 23 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~~~~~~~D~v 101 (199)
T 2xvm_A 23 EVLEAVKVVKPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIENL-DNLHTRVVDLNNLTFDRQYDFI 101 (199)
T ss_dssp HHHHHTTTSCSCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC-TTEEEEECCGGGCCCCCCEEEE
T ss_pred HHHHHhhccCCCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhCCC-CCcEEEEcchhhCCCCCCceEE
Confidence 455666666788999999999999999999888999999999999999999988776 479999999998765 479999
Q ss_pred ecccCcc
Q 047897 100 VANIPYG 106 (232)
Q Consensus 100 i~n~p~~ 106 (232)
+++.+++
T Consensus 102 ~~~~~l~ 108 (199)
T 2xvm_A 102 LSTVVLM 108 (199)
T ss_dssp EEESCGG
T ss_pred EEcchhh
Confidence 9876544
No 89
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.41 E-value=8e-13 Score=105.86 Aligned_cols=90 Identities=10% Similarity=-0.045 Sum_probs=70.7
Q ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhh----------c------CCC
Q 047897 15 NQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAAD----------S------GFH 78 (232)
Q Consensus 15 ~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~----------~------~~~ 78 (232)
++.+.+.+.....+.++.+|||+|||+|..+..|++.+.+|+|+|+|+.+++.|+++... . ...
T Consensus 53 ~~~l~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (252)
T 2gb4_A 53 HQLLKKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSS 132 (252)
T ss_dssp CHHHHHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETT
T ss_pred CHHHHHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCC
Confidence 345555554444445788999999999999999999999999999999999999887641 0 011
Q ss_pred ccEEEEEcCCCCCCC---CCcceeecccC
Q 047897 79 DRLNVISKDALKTEF---PQFDLVVANIP 104 (232)
Q Consensus 79 ~~~~~~~~D~~~~~~---~~~D~Vi~n~p 104 (232)
.+++++++|+.+++. ++||+|+++..
T Consensus 133 ~~i~~~~~D~~~l~~~~~~~FD~V~~~~~ 161 (252)
T 2gb4_A 133 GSISLYCCSIFDLPRANIGKFDRIWDRGA 161 (252)
T ss_dssp SSEEEEESCTTTGGGGCCCCEEEEEESSS
T ss_pred CceEEEECccccCCcccCCCEEEEEEhhh
Confidence 579999999999865 47999997644
No 90
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.41 E-value=1.3e-12 Score=110.37 Aligned_cols=102 Identities=16% Similarity=0.324 Sum_probs=82.4
Q ss_pred cCCCcccccCCHHHHHHHHHh--cCCCCCCEEEEEcCCccHhHHHHHhcC--CeEEEEEcCHHHHHHHHHHHhhcCCCcc
Q 047897 5 HKSKGQHILTNQRVLDSIVRK--SSINPDDTVLEIGPGTGNLTLKLLEVS--KKVHAIEIDERMVEILNRRAADSGFHDR 80 (232)
Q Consensus 5 ~k~~gq~fl~~~~~~~~i~~~--~~~~~~~~vLDiG~G~G~~t~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~ 80 (232)
...+.|.+.+.+.....++.. ....++.+|||+| |+|.++..++..+ .+|+|+|+|+.+++.|++++...|+. +
T Consensus 145 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~-~ 222 (373)
T 2qm3_A 145 LHEFDQAYVTPETTVARVILMHTRGDLENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYE-D 222 (373)
T ss_dssp CGGGTCCCBCHHHHHHHHHHHHHTTCSTTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCC-C
T ss_pred chhcCCeecCHHHHHHHHHHHhhcCCCCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-C
Confidence 345667676666666666533 2233578999999 9999999998843 69999999999999999999988874 8
Q ss_pred EEEEEcCCCC-CCC---CCcceeecccCcccc
Q 047897 81 LNVISKDALK-TEF---PQFDLVVANIPYGIS 108 (232)
Q Consensus 81 ~~~~~~D~~~-~~~---~~~D~Vi~n~p~~~~ 108 (232)
++++.+|+.+ ++. .+||+|++|+||+..
T Consensus 223 v~~~~~D~~~~l~~~~~~~fD~Vi~~~p~~~~ 254 (373)
T 2qm3_A 223 IEIFTFDLRKPLPDYALHKFDTFITDPPETLE 254 (373)
T ss_dssp EEEECCCTTSCCCTTTSSCBSEEEECCCSSHH
T ss_pred EEEEEChhhhhchhhccCCccEEEECCCCchH
Confidence 9999999998 553 379999999999764
No 91
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.41 E-value=1.1e-12 Score=102.29 Aligned_cols=91 Identities=21% Similarity=0.295 Sum_probs=75.4
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcC--CeEEEEEcCHHHHHHHHHHHhhcCCCc----cEEEEEcCCC
Q 047897 16 QRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVS--KKVHAIEIDERMVEILNRRAADSGFHD----RLNVISKDAL 89 (232)
Q Consensus 16 ~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~----~~~~~~~D~~ 89 (232)
+...+.+.+.+...++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.+++++...++.. +++++.+|+.
T Consensus 15 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 94 (217)
T 3jwh_A 15 QQRMNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALT 94 (217)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTT
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcc
Confidence 4566677777766678899999999999999999854 699999999999999999998776643 7999999997
Q ss_pred CCCC--CCcceeecccCcc
Q 047897 90 KTEF--PQFDLVVANIPYG 106 (232)
Q Consensus 90 ~~~~--~~~D~Vi~n~p~~ 106 (232)
..+. .+||+|+++-.++
T Consensus 95 ~~~~~~~~fD~v~~~~~l~ 113 (217)
T 3jwh_A 95 YQDKRFHGYDAATVIEVIE 113 (217)
T ss_dssp SCCGGGCSCSEEEEESCGG
T ss_pred cccccCCCcCEEeeHHHHH
Confidence 6665 3899999875543
No 92
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.41 E-value=4.5e-13 Score=112.79 Aligned_cols=74 Identities=27% Similarity=0.429 Sum_probs=66.4
Q ss_pred CCCCEEEEEcCCccHhHHHHHhcC-CeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC-Ccceeeccc
Q 047897 29 NPDDTVLEIGPGTGNLTLKLLEVS-KKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP-QFDLVVANI 103 (232)
Q Consensus 29 ~~~~~vLDiG~G~G~~t~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~-~~D~Vi~n~ 103 (232)
.+|.+|||||||+|.++..+++.+ .+|+|||.++ +++.|+++++.+|+.++++++++|+.++..+ ++|+|++.+
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~DvivsE~ 157 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEW 157 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCC
T ss_pred cCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEEeec
Confidence 468899999999999999888865 6899999986 8999999999999988999999999998776 899999864
No 93
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.41 E-value=1.4e-12 Score=106.05 Aligned_cols=93 Identities=17% Similarity=0.223 Sum_probs=78.7
Q ss_pred ccCCHHHHHHHHHhc-CCCCCCEEEEEcCCccHhHHHHHhc---CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcC
Q 047897 12 ILTNQRVLDSIVRKS-SINPDDTVLEIGPGTGNLTLKLLEV---SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKD 87 (232)
Q Consensus 12 fl~~~~~~~~i~~~~-~~~~~~~vLDiG~G~G~~t~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D 87 (232)
++.++..++.+++.+ .+.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.+++++...+ .+++++.+|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~v~~~~~d 80 (284)
T 3gu3_A 3 LYYNDDYVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLP--YDSEFLEGD 80 (284)
T ss_dssp TTCCHHHHHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSS--SEEEEEESC
T ss_pred cccchHHHHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEEcc
Confidence 344678888888766 5667889999999999999999984 5899999999999999999998765 379999999
Q ss_pred CCCCCCC-CcceeecccCcc
Q 047897 88 ALKTEFP-QFDLVVANIPYG 106 (232)
Q Consensus 88 ~~~~~~~-~~D~Vi~n~p~~ 106 (232)
+.+++.+ +||+|+++...+
T Consensus 81 ~~~~~~~~~fD~v~~~~~l~ 100 (284)
T 3gu3_A 81 ATEIELNDKYDIAICHAFLL 100 (284)
T ss_dssp TTTCCCSSCEEEEEEESCGG
T ss_pred hhhcCcCCCeeEEEECChhh
Confidence 9998765 799999976543
No 94
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.40 E-value=7.6e-13 Score=103.71 Aligned_cols=92 Identities=21% Similarity=0.228 Sum_probs=74.3
Q ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc---CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCC
Q 047897 15 NQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV---SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKT 91 (232)
Q Consensus 15 ~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~ 91 (232)
++.....+...+...++.+|||||||+|..+..+++. +.+|+++|+++.+++.+++++...++.++++++.+|+.+.
T Consensus 43 ~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 122 (223)
T 3duw_A 43 SPTQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDS 122 (223)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHH
T ss_pred CHHHHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH
Confidence 4555444444444557789999999999999999984 6899999999999999999999888866799999999764
Q ss_pred CC-------CCcceeecccCcc
Q 047897 92 EF-------PQFDLVVANIPYG 106 (232)
Q Consensus 92 ~~-------~~~D~Vi~n~p~~ 106 (232)
.. ..||+|+++.+..
T Consensus 123 ~~~~~~~~~~~fD~v~~d~~~~ 144 (223)
T 3duw_A 123 LQQIENEKYEPFDFIFIDADKQ 144 (223)
T ss_dssp HHHHHHTTCCCCSEEEECSCGG
T ss_pred HHHHHhcCCCCcCEEEEcCCcH
Confidence 11 4699999887643
No 95
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.40 E-value=2.9e-13 Score=108.65 Aligned_cols=89 Identities=25% Similarity=0.263 Sum_probs=69.1
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCC-CCC-C
Q 047897 16 QRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDAL-KTE-F 93 (232)
Q Consensus 16 ~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~-~~~-~ 93 (232)
+..++.+++.+.+.++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.+++++.... -...+...+.. ... .
T Consensus 31 ~~~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~~~~--v~~~~~~~~~~~~~~~~ 108 (261)
T 3iv6_A 31 PSDRENDIFLENIVPGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALADRC--VTIDLLDITAEIPKELA 108 (261)
T ss_dssp CCHHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTSSSC--CEEEECCTTSCCCGGGT
T ss_pred HHHHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcc--ceeeeeecccccccccC
Confidence 5788899999998999999999999999999999999999999999999999999986531 12333322220 011 2
Q ss_pred CCcceeecccCcc
Q 047897 94 PQFDLVVANIPYG 106 (232)
Q Consensus 94 ~~~D~Vi~n~p~~ 106 (232)
++||+|+++..++
T Consensus 109 ~~fD~Vv~~~~l~ 121 (261)
T 3iv6_A 109 GHFDFVLNDRLIN 121 (261)
T ss_dssp TCCSEEEEESCGG
T ss_pred CCccEEEEhhhhH
Confidence 3799999986543
No 96
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.40 E-value=1.3e-12 Score=102.06 Aligned_cols=91 Identities=18% Similarity=0.276 Sum_probs=75.2
Q ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcC--CeEEEEEcCHHHHHHHHHHHhhcCCCc----cEEEEEcCC
Q 047897 15 NQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVS--KKVHAIEIDERMVEILNRRAADSGFHD----RLNVISKDA 88 (232)
Q Consensus 15 ~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~----~~~~~~~D~ 88 (232)
++...+.+.+.+...++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.+++++...++.+ +++++.+|+
T Consensus 14 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 93 (219)
T 3jwg_A 14 NQQRLGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSL 93 (219)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCS
T ss_pred hHHHHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcc
Confidence 35666777777665678899999999999999999854 799999999999999999997766543 799999999
Q ss_pred CCCCC--CCcceeecccCc
Q 047897 89 LKTEF--PQFDLVVANIPY 105 (232)
Q Consensus 89 ~~~~~--~~~D~Vi~n~p~ 105 (232)
...+. .+||+|+++-.+
T Consensus 94 ~~~~~~~~~fD~V~~~~~l 112 (219)
T 3jwg_A 94 VYRDKRFSGYDAATVIEVI 112 (219)
T ss_dssp SSCCGGGTTCSEEEEESCG
T ss_pred cccccccCCCCEEEEHHHH
Confidence 77665 389999986543
No 97
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.40 E-value=1.1e-12 Score=102.38 Aligned_cols=87 Identities=22% Similarity=0.410 Sum_probs=75.0
Q ss_pred HHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcC---CeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC-
Q 047897 19 LDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVS---KKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP- 94 (232)
Q Consensus 19 ~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~- 94 (232)
.+.+++.+.+.++.+|||+|||+|.++..+++.. .+|+|+|+++.+++.+++++...++ ++++++.+|+.+.+.+
T Consensus 26 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~~~~~ 104 (219)
T 3dh0_A 26 PEKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGL-KNVEVLKSEENKIPLPD 104 (219)
T ss_dssp HHHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTC-TTEEEEECBTTBCSSCS
T ss_pred HHHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEecccccCCCCC
Confidence 4567777788889999999999999999999843 7999999999999999999988877 4799999999987654
Q ss_pred -CcceeecccCcc
Q 047897 95 -QFDLVVANIPYG 106 (232)
Q Consensus 95 -~~D~Vi~n~p~~ 106 (232)
+||+|+++..++
T Consensus 105 ~~fD~v~~~~~l~ 117 (219)
T 3dh0_A 105 NTVDFIFMAFTFH 117 (219)
T ss_dssp SCEEEEEEESCGG
T ss_pred CCeeEEEeehhhh
Confidence 799999875543
No 98
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.40 E-value=1.5e-12 Score=118.22 Aligned_cols=95 Identities=22% Similarity=0.350 Sum_probs=82.7
Q ss_pred CCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc------------------------------------------
Q 047897 14 TNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV------------------------------------------ 51 (232)
Q Consensus 14 ~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~------------------------------------------ 51 (232)
..+.+++.|+...++.++..|||++||+|.++..++..
T Consensus 174 l~e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~ 253 (703)
T 3v97_A 174 IKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLA 253 (703)
T ss_dssp SCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccc
Confidence 34889999999999888999999999999999887752
Q ss_pred --CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC----CcceeecccCcccc
Q 047897 52 --SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP----QFDLVVANIPYGIS 108 (232)
Q Consensus 52 --~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~----~~D~Vi~n~p~~~~ 108 (232)
..+++|+|+|+.+++.|++|+...|+.+.+++.++|+.++..+ ++|+|++||||+..
T Consensus 254 ~~~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~R 316 (703)
T 3v97_A 254 EYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGER 316 (703)
T ss_dssp HCCCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC-
T ss_pred cCCccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCcccc
Confidence 1479999999999999999999999977799999999987432 79999999999753
No 99
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.40 E-value=3.6e-12 Score=101.58 Aligned_cols=83 Identities=25% Similarity=0.462 Sum_probs=70.6
Q ss_pred HHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC-Cc
Q 047897 18 VLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP-QF 96 (232)
Q Consensus 18 ~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~-~~ 96 (232)
.++.++......++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.++++....+. +++++++|+.+.+.+ +|
T Consensus 29 ~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~f 106 (252)
T 1wzn_A 29 FVEEIFKEDAKREVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKAKERNL--KIEFLQGDVLEIAFKNEF 106 (252)
T ss_dssp HHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CCEEEESCGGGCCCCSCE
T ss_pred HHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEECChhhcccCCCc
Confidence 445555555556778999999999999999999888999999999999999999987664 699999999987765 79
Q ss_pred ceeecc
Q 047897 97 DLVVAN 102 (232)
Q Consensus 97 D~Vi~n 102 (232)
|+|++.
T Consensus 107 D~v~~~ 112 (252)
T 1wzn_A 107 DAVTMF 112 (252)
T ss_dssp EEEEEC
T ss_pred cEEEEc
Confidence 999863
No 100
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.40 E-value=1.7e-12 Score=102.65 Aligned_cols=92 Identities=21% Similarity=0.339 Sum_probs=78.0
Q ss_pred CCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcC-CeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCC-C
Q 047897 14 TNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVS-KKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALK-T 91 (232)
Q Consensus 14 ~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~-~ 91 (232)
..+.+...+++.+.+.++.+|||+|||+|.++..+++.. .+|+++|+++.+++.+++++...++ .+++++.+|+.. +
T Consensus 75 ~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~ 153 (235)
T 1jg1_A 75 SAPHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGV-KNVHVILGDGSKGF 153 (235)
T ss_dssp CCHHHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTC-CSEEEEESCGGGCC
T ss_pred ccHHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCC-CCcEEEECCcccCC
Confidence 458899999999988899999999999999999999854 8999999999999999999988887 469999999732 2
Q ss_pred CCC-CcceeecccCcc
Q 047897 92 EFP-QFDLVVANIPYG 106 (232)
Q Consensus 92 ~~~-~~D~Vi~n~p~~ 106 (232)
+.. .||+|+++.+.+
T Consensus 154 ~~~~~fD~Ii~~~~~~ 169 (235)
T 1jg1_A 154 PPKAPYDVIIVTAGAP 169 (235)
T ss_dssp GGGCCEEEEEECSBBS
T ss_pred CCCCCccEEEECCcHH
Confidence 222 499999876543
No 101
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.40 E-value=5.5e-12 Score=100.21 Aligned_cols=91 Identities=21% Similarity=0.235 Sum_probs=79.9
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC-C-
Q 047897 16 QRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE-F- 93 (232)
Q Consensus 16 ~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~-~- 93 (232)
+..+..++..+++.++++|||+|||+|.++..+++.+.+|+++|+++.+++.++++....++.++++++.+|+.+.. .
T Consensus 77 ~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 156 (248)
T 2yvl_A 77 PKDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPE 156 (248)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCT
T ss_pred chhHHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCC
Confidence 56667888888888999999999999999999998888999999999999999999988887668999999998864 2
Q ss_pred CCcceeecccCcc
Q 047897 94 PQFDLVVANIPYG 106 (232)
Q Consensus 94 ~~~D~Vi~n~p~~ 106 (232)
..||+|++++|..
T Consensus 157 ~~~D~v~~~~~~~ 169 (248)
T 2yvl_A 157 GIFHAAFVDVREP 169 (248)
T ss_dssp TCBSEEEECSSCG
T ss_pred CcccEEEECCcCH
Confidence 3799999998743
No 102
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.39 E-value=2.3e-12 Score=101.25 Aligned_cols=94 Identities=15% Similarity=0.244 Sum_probs=78.2
Q ss_pred cCCHHHHHHHHHhc--CCCCCCEEEEEcCCccHhHHHHHhcC-------CeEEEEEcCHHHHHHHHHHHhhcCC----Cc
Q 047897 13 LTNQRVLDSIVRKS--SINPDDTVLEIGPGTGNLTLKLLEVS-------KKVHAIEIDERMVEILNRRAADSGF----HD 79 (232)
Q Consensus 13 l~~~~~~~~i~~~~--~~~~~~~vLDiG~G~G~~t~~l~~~~-------~~v~~vD~~~~~~~~a~~~~~~~~~----~~ 79 (232)
...+.+...+++.+ .+.++.+|||||||+|.++..+++.. .+|+++|+++.+++.+++++...++ ..
T Consensus 61 ~~~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~ 140 (227)
T 2pbf_A 61 ISAPHMHALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKID 140 (227)
T ss_dssp ECCHHHHHHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSST
T ss_pred cCChHHHHHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccC
Confidence 44588888888887 47788999999999999999999854 4999999999999999999987762 25
Q ss_pred cEEEEEcCCCCCC----C--CCcceeecccCcc
Q 047897 80 RLNVISKDALKTE----F--PQFDLVVANIPYG 106 (232)
Q Consensus 80 ~~~~~~~D~~~~~----~--~~~D~Vi~n~p~~ 106 (232)
+++++.+|+.+.. . .+||+|+++.+.+
T Consensus 141 ~v~~~~~d~~~~~~~~~~~~~~fD~I~~~~~~~ 173 (227)
T 2pbf_A 141 NFKIIHKNIYQVNEEEKKELGLFDAIHVGASAS 173 (227)
T ss_dssp TEEEEECCGGGCCHHHHHHHCCEEEEEECSBBS
T ss_pred CEEEEECChHhcccccCccCCCcCEEEECCchH
Confidence 7999999998854 2 4799999876543
No 103
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.39 E-value=1.5e-12 Score=113.40 Aligned_cols=89 Identities=22% Similarity=0.377 Sum_probs=75.2
Q ss_pred HHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc-CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC-Cc
Q 047897 19 LDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV-SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP-QF 96 (232)
Q Consensus 19 ~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~-~~ 96 (232)
.+.+++.+...++.+|||||||+|.++..+++. ..+|+|+|+++ +++.|++++...++.++++++++|+.+++.+ +|
T Consensus 147 ~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~~~f 225 (480)
T 3b3j_A 147 QRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQV 225 (480)
T ss_dssp HHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCE
T ss_pred HHHHHHhhhhcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccCCCe
Confidence 445666666567889999999999999999885 46999999998 9999999999888877899999999987654 79
Q ss_pred ceeecccC-cccc
Q 047897 97 DLVVANIP-YGIS 108 (232)
Q Consensus 97 D~Vi~n~p-~~~~ 108 (232)
|+|+++.+ |+..
T Consensus 226 D~Ivs~~~~~~~~ 238 (480)
T 3b3j_A 226 DIIISEPMGYMLF 238 (480)
T ss_dssp EEEECCCCHHHHT
T ss_pred EEEEEeCchHhcC
Confidence 99999988 4443
No 104
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.39 E-value=2e-12 Score=107.97 Aligned_cols=89 Identities=22% Similarity=0.335 Sum_probs=74.5
Q ss_pred HHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcC-CeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC--
Q 047897 18 VLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVS-KKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP-- 94 (232)
Q Consensus 18 ~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~-- 94 (232)
..+.+.+.+...++.+|||||||+|.++..+++.+ .+|+|+|+++ +++.|++++...++.++++++++|+.+++.+
T Consensus 52 ~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 130 (340)
T 2fyt_A 52 YRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVE 130 (340)
T ss_dssp HHHHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCS
T ss_pred HHHHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCC
Confidence 33555566666788899999999999999999865 5999999997 9999999999888867899999999987654
Q ss_pred Ccceeeccc-Cccc
Q 047897 95 QFDLVVANI-PYGI 107 (232)
Q Consensus 95 ~~D~Vi~n~-p~~~ 107 (232)
+||+|+++. +|..
T Consensus 131 ~~D~Ivs~~~~~~l 144 (340)
T 2fyt_A 131 KVDVIISEWMGYFL 144 (340)
T ss_dssp CEEEEEECCCBTTB
T ss_pred cEEEEEEcCchhhc
Confidence 799999986 4443
No 105
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.39 E-value=1.6e-12 Score=102.16 Aligned_cols=87 Identities=15% Similarity=0.289 Sum_probs=71.0
Q ss_pred HHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc---CCeEEEEEcCHHHHHHHHHHHhhcCCC-ccEEEEEcCCCCCC-
Q 047897 18 VLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV---SKKVHAIEIDERMVEILNRRAADSGFH-DRLNVISKDALKTE- 92 (232)
Q Consensus 18 ~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~~~~~~~D~~~~~- 92 (232)
++..++...+..++.+|||||||+|..+..+++. +.+|+++|+|+.+++.|++++...|+. ++++++.+|+.+..
T Consensus 44 ~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~ 123 (221)
T 3dr5_A 44 LLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMS 123 (221)
T ss_dssp HHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGG
T ss_pred HHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHH
Confidence 3344444444444569999999999999999882 689999999999999999999999886 68999999997642
Q ss_pred ---CCCcceeecccC
Q 047897 93 ---FPQFDLVVANIP 104 (232)
Q Consensus 93 ---~~~~D~Vi~n~p 104 (232)
.++||+|+++.+
T Consensus 124 ~~~~~~fD~V~~d~~ 138 (221)
T 3dr5_A 124 RLANDSYQLVFGQVS 138 (221)
T ss_dssp GSCTTCEEEEEECCC
T ss_pred HhcCCCcCeEEEcCc
Confidence 348999998764
No 106
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.39 E-value=1.4e-12 Score=103.28 Aligned_cols=75 Identities=16% Similarity=0.239 Sum_probs=65.2
Q ss_pred CCCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC--Ccceee-ccc
Q 047897 29 NPDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP--QFDLVV-ANI 103 (232)
Q Consensus 29 ~~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~--~~D~Vi-~n~ 103 (232)
.++++|||||||+|.++..++.. ..+|+|+|+|+.+++.|++|+..+|+.++++++.+|.++...+ +||+|+ +++
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iviagm 99 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGM 99 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeCC
Confidence 47789999999999999999984 4589999999999999999999999877899999999987554 499766 443
No 107
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.39 E-value=2.5e-12 Score=107.75 Aligned_cols=88 Identities=22% Similarity=0.328 Sum_probs=75.4
Q ss_pred HHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcC-CeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC-C
Q 047897 18 VLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVS-KKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP-Q 95 (232)
Q Consensus 18 ~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~-~ 95 (232)
..+.+++.+...++.+|||||||+|.++..+++.+ .+|+|+|+++ +++.|++++...++.++++++.+|+.+.+.+ +
T Consensus 38 y~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~ 116 (348)
T 2y1w_A 38 YQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQ 116 (348)
T ss_dssp HHHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSC
T ss_pred HHHHHHhccccCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCCCc
Confidence 45667777776788999999999999999999854 5999999996 8899999999888867899999999987654 7
Q ss_pred cceeecccCcc
Q 047897 96 FDLVVANIPYG 106 (232)
Q Consensus 96 ~D~Vi~n~p~~ 106 (232)
||+|+++.+.+
T Consensus 117 ~D~Ivs~~~~~ 127 (348)
T 2y1w_A 117 VDIIISEPMGY 127 (348)
T ss_dssp EEEEEECCCBT
T ss_pred eeEEEEeCchh
Confidence 99999987643
No 108
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.39 E-value=1.1e-12 Score=105.25 Aligned_cols=87 Identities=26% Similarity=0.472 Sum_probs=75.5
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc-CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC
Q 047897 16 QRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV-SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP 94 (232)
Q Consensus 16 ~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~ 94 (232)
...++.+++.+.+.++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.++++.... ++++++.+|+.+.+.+
T Consensus 41 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~ 117 (266)
T 3ujc_A 41 LEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN---NKIIFEANDILTKEFP 117 (266)
T ss_dssp HHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC---TTEEEEECCTTTCCCC
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC---CCeEEEECccccCCCC
Confidence 456778888888888999999999999999999985 889999999999999999988654 5799999999987653
Q ss_pred --CcceeecccCc
Q 047897 95 --QFDLVVANIPY 105 (232)
Q Consensus 95 --~~D~Vi~n~p~ 105 (232)
+||+|+++..+
T Consensus 118 ~~~fD~v~~~~~l 130 (266)
T 3ujc_A 118 ENNFDLIYSRDAI 130 (266)
T ss_dssp TTCEEEEEEESCG
T ss_pred CCcEEEEeHHHHH
Confidence 89999987543
No 109
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.38 E-value=2e-12 Score=109.45 Aligned_cols=85 Identities=19% Similarity=0.354 Sum_probs=73.5
Q ss_pred HHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCC-eEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC-C
Q 047897 18 VLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSK-KVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP-Q 95 (232)
Q Consensus 18 ~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~-~ 95 (232)
..+.+.+.....++.+|||+|||+|.++..+++.+. +|+|+|++ .+++.|++++...++.++++++++|+.+++.+ +
T Consensus 51 ~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 129 (376)
T 3r0q_C 51 YFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLPEK 129 (376)
T ss_dssp HHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCSSC
T ss_pred HHHHHHhccccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcCCc
Confidence 344455555667889999999999999999999665 99999999 99999999999988877899999999998764 8
Q ss_pred cceeeccc
Q 047897 96 FDLVVANI 103 (232)
Q Consensus 96 ~D~Vi~n~ 103 (232)
||+|+++.
T Consensus 130 ~D~Iv~~~ 137 (376)
T 3r0q_C 130 VDVIISEW 137 (376)
T ss_dssp EEEEEECC
T ss_pred ceEEEEcC
Confidence 99999976
No 110
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.38 E-value=3.3e-12 Score=102.11 Aligned_cols=90 Identities=20% Similarity=0.235 Sum_probs=78.8
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc---CCeEEEEEcCHHHHHHHHHHHhhc-CCCccEEEEEcCCCCC
Q 047897 16 QRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV---SKKVHAIEIDERMVEILNRRAADS-GFHDRLNVISKDALKT 91 (232)
Q Consensus 16 ~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~-~~~~~~~~~~~D~~~~ 91 (232)
+..+..+++.+++.++.+|||+|||+|.++..+++. +.+|+++|+++.+++.+++++... |. ++++++++|+.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~-~~v~~~~~d~~~~ 160 (258)
T 2pwy_A 82 PKDASAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQV-ENVRFHLGKLEEA 160 (258)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCC-CCEEEEESCGGGC
T ss_pred chHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC-CCEEEEECchhhc
Confidence 566678888888889999999999999999999985 689999999999999999999877 63 6899999999987
Q ss_pred CCC--CcceeecccCcc
Q 047897 92 EFP--QFDLVVANIPYG 106 (232)
Q Consensus 92 ~~~--~~D~Vi~n~p~~ 106 (232)
+.+ .||+|++++|..
T Consensus 161 ~~~~~~~D~v~~~~~~~ 177 (258)
T 2pwy_A 161 ELEEAAYDGVALDLMEP 177 (258)
T ss_dssp CCCTTCEEEEEEESSCG
T ss_pred CCCCCCcCEEEECCcCH
Confidence 443 799999998754
No 111
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.38 E-value=2.5e-12 Score=100.30 Aligned_cols=77 Identities=16% Similarity=0.278 Sum_probs=67.5
Q ss_pred CCCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC--C--CCcceeecc
Q 047897 29 NPDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE--F--PQFDLVVAN 102 (232)
Q Consensus 29 ~~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~--~--~~~D~Vi~n 102 (232)
.++.+|||||||+|.++..+++. ..+++|+|+++.+++.|++++...++ ++++++++|+.+++ + .+||.|++|
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~D~i~~~ 118 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGV-PNIKLLWVDGSDLTDYFEDGEIDRLYLN 118 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-SSEEEEECCSSCGGGTSCTTCCSEEEEE
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhcCCCCCCEEEEE
Confidence 35789999999999999999884 57999999999999999999998887 68999999998854 3 379999999
Q ss_pred cCcc
Q 047897 103 IPYG 106 (232)
Q Consensus 103 ~p~~ 106 (232)
.|..
T Consensus 119 ~~~~ 122 (214)
T 1yzh_A 119 FSDP 122 (214)
T ss_dssp SCCC
T ss_pred CCCC
Confidence 8754
No 112
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.38 E-value=1.3e-12 Score=104.69 Aligned_cols=92 Identities=21% Similarity=0.351 Sum_probs=74.8
Q ss_pred CHHHHHHHHHhc-----CCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCC
Q 047897 15 NQRVLDSIVRKS-----SINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDAL 89 (232)
Q Consensus 15 ~~~~~~~i~~~~-----~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~ 89 (232)
++...+.+++.+ .+.++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.+++++ ..+ .++++++.+|+.
T Consensus 19 ~~~~~~~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-~~~-~~~~~~~~~d~~ 96 (263)
T 2yqz_A 19 PPEVAGQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKI-AGV-DRKVQVVQADAR 96 (263)
T ss_dssp CHHHHHHHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHT-TTS-CTTEEEEESCTT
T ss_pred ChHHHHHHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-hcc-CCceEEEEcccc
Confidence 455555555554 5667889999999999999999998899999999999999999998 222 268999999999
Q ss_pred CCCCC--CcceeecccCcccc
Q 047897 90 KTEFP--QFDLVVANIPYGIS 108 (232)
Q Consensus 90 ~~~~~--~~D~Vi~n~p~~~~ 108 (232)
+++++ +||+|+++..++..
T Consensus 97 ~~~~~~~~fD~v~~~~~l~~~ 117 (263)
T 2yqz_A 97 AIPLPDESVHGVIVVHLWHLV 117 (263)
T ss_dssp SCCSCTTCEEEEEEESCGGGC
T ss_pred cCCCCCCCeeEEEECCchhhc
Confidence 88754 79999997665544
No 113
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.38 E-value=2e-12 Score=103.25 Aligned_cols=93 Identities=18% Similarity=0.251 Sum_probs=73.9
Q ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc---CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCC
Q 047897 15 NQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV---SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKT 91 (232)
Q Consensus 15 ~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~ 91 (232)
++.....+...+...++.+|||||||+|..+..+++. +.+|+++|+++.+++.|++++...++.++++++.+|+.+.
T Consensus 48 ~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~ 127 (248)
T 3tfw_A 48 AANQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQS 127 (248)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHH
T ss_pred CHHHHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH
Confidence 3444444433334457789999999999999999984 6899999999999999999999988867899999999763
Q ss_pred -C----CCCcceeecccCccc
Q 047897 92 -E----FPQFDLVVANIPYGI 107 (232)
Q Consensus 92 -~----~~~~D~Vi~n~p~~~ 107 (232)
+ .++||+|+++.+...
T Consensus 128 l~~~~~~~~fD~V~~d~~~~~ 148 (248)
T 3tfw_A 128 LESLGECPAFDLIFIDADKPN 148 (248)
T ss_dssp HHTCCSCCCCSEEEECSCGGG
T ss_pred HHhcCCCCCeEEEEECCchHH
Confidence 2 237999998875433
No 114
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.38 E-value=1.9e-12 Score=105.22 Aligned_cols=87 Identities=21% Similarity=0.344 Sum_probs=72.6
Q ss_pred HHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC-C--CC
Q 047897 19 LDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE-F--PQ 95 (232)
Q Consensus 19 ~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~-~--~~ 95 (232)
+..+++.+... +.+|||||||+|.++..+++.+.+|+|+|+++.+++.+++++...++.++++++.+|+.+.+ . .+
T Consensus 58 l~~~l~~~~~~-~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 136 (285)
T 4htf_A 58 LDRVLAEMGPQ-KLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETP 136 (285)
T ss_dssp HHHHHHHTCSS-CCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSC
T ss_pred HHHHHHhcCCC-CCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCC
Confidence 33455555543 67999999999999999999889999999999999999999998887678999999999886 2 48
Q ss_pred cceeecccCcc
Q 047897 96 FDLVVANIPYG 106 (232)
Q Consensus 96 ~D~Vi~n~p~~ 106 (232)
||+|+++-.++
T Consensus 137 fD~v~~~~~l~ 147 (285)
T 4htf_A 137 VDLILFHAVLE 147 (285)
T ss_dssp EEEEEEESCGG
T ss_pred ceEEEECchhh
Confidence 99999875543
No 115
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.38 E-value=2.6e-12 Score=100.60 Aligned_cols=83 Identities=22% Similarity=0.312 Sum_probs=69.8
Q ss_pred HHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC--C
Q 047897 18 VLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP--Q 95 (232)
Q Consensus 18 ~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~--~ 95 (232)
+.+.+.+.+ .++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.++++....+ .+++++.+|+.+.+.+ +
T Consensus 28 ~~~~l~~~~--~~~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~~~~~ 103 (227)
T 1ve3_A 28 LEPLLMKYM--KKRGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAKSRE--SNVEFIVGDARKLSFEDKT 103 (227)
T ss_dssp HHHHHHHSC--CSCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCTTSCCSCTTC
T ss_pred HHHHHHHhc--CCCCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC--CCceEEECchhcCCCCCCc
Confidence 344444444 347899999999999999999877799999999999999999998766 5799999999987653 7
Q ss_pred cceeecccC
Q 047897 96 FDLVVANIP 104 (232)
Q Consensus 96 ~D~Vi~n~p 104 (232)
||+|+++.+
T Consensus 104 ~D~v~~~~~ 112 (227)
T 1ve3_A 104 FDYVIFIDS 112 (227)
T ss_dssp EEEEEEESC
T ss_pred EEEEEEcCc
Confidence 999999877
No 116
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.38 E-value=1.7e-12 Score=105.49 Aligned_cols=82 Identities=18% Similarity=0.314 Sum_probs=70.6
Q ss_pred HhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC-Ccceeecc
Q 047897 24 RKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP-QFDLVVAN 102 (232)
Q Consensus 24 ~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~-~~D~Vi~n 102 (232)
+.+...++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.+++++...++ +++++.+|+.+.+.. +||+|+++
T Consensus 114 ~~~~~~~~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~fD~i~~~ 191 (286)
T 3m70_A 114 DAAKIISPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKENL--NISTALYDINAANIQENYDFIVST 191 (286)
T ss_dssp HHHHHSCSCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCGGGCCCCSCEEEEEEC
T ss_pred HHhhccCCCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHcCC--ceEEEEeccccccccCCccEEEEc
Confidence 333334788999999999999999999888999999999999999999988775 699999999987654 79999998
Q ss_pred cCccc
Q 047897 103 IPYGI 107 (232)
Q Consensus 103 ~p~~~ 107 (232)
.+++.
T Consensus 192 ~~~~~ 196 (286)
T 3m70_A 192 VVFMF 196 (286)
T ss_dssp SSGGG
T ss_pred cchhh
Confidence 76553
No 117
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.38 E-value=3.5e-12 Score=109.08 Aligned_cols=95 Identities=18% Similarity=0.309 Sum_probs=77.7
Q ss_pred CCcccccCCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHH-------HHHHhhcCC
Q 047897 7 SKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEIL-------NRRAADSGF 77 (232)
Q Consensus 7 ~~gq~fl~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a-------~~~~~~~~~ 77 (232)
.+|+. .+.++..+++.+++.++++|||||||+|.++..++.. ..+|+|+|+++.+++.| ++++...|+
T Consensus 222 ~yGet---~p~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl 298 (433)
T 1u2z_A 222 VYGEL---LPNFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGM 298 (433)
T ss_dssp CCCCB---CHHHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred ccccc---cHHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCC
Confidence 44553 3889999999999999999999999999999999983 35899999999999998 889888774
Q ss_pred C-ccEEEEEcCCCCC------CCCCcceeecccC
Q 047897 78 H-DRLNVISKDALKT------EFPQFDLVVANIP 104 (232)
Q Consensus 78 ~-~~~~~~~~D~~~~------~~~~~D~Vi~n~p 104 (232)
. .+++++++|.... ...+||+|++|..
T Consensus 299 ~~~nV~~i~gD~~~~~~~~~~~~~~FDvIvvn~~ 332 (433)
T 1u2z_A 299 RLNNVEFSLKKSFVDNNRVAELIPQCDVILVNNF 332 (433)
T ss_dssp CCCCEEEEESSCSTTCHHHHHHGGGCSEEEECCT
T ss_pred CCCceEEEEcCccccccccccccCCCCEEEEeCc
Confidence 2 6899999876532 1347999998743
No 118
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.38 E-value=6.2e-13 Score=112.84 Aligned_cols=94 Identities=13% Similarity=0.157 Sum_probs=77.3
Q ss_pred ccCCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcC-CeEEEEEcCHHHHHHHHHHHhhcCCCc-cEEEEEcCCC
Q 047897 12 ILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVS-KKVHAIEIDERMVEILNRRAADSGFHD-RLNVISKDAL 89 (232)
Q Consensus 12 fl~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~-~~~~~~~D~~ 89 (232)
|+.|+...+.++...- .++.+|||+|||+|.++..++..+ .+|+|+|+|+.+++.|++|+..+++.+ +++++++|+.
T Consensus 195 ff~~~~~~~~~~~~~~-~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~ 273 (385)
T 2b78_A 195 IFLDQRQVRNELINGS-AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF 273 (385)
T ss_dssp SCGGGHHHHHHHHHTT-TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH
T ss_pred cCCcHHHHHHHHHHHh-cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHH
Confidence 4456666666665442 477899999999999999999854 589999999999999999999988854 8999999997
Q ss_pred CCC------CCCcceeecccCcc
Q 047897 90 KTE------FPQFDLVVANIPYG 106 (232)
Q Consensus 90 ~~~------~~~~D~Vi~n~p~~ 106 (232)
+.. ...||+|++|+|+.
T Consensus 274 ~~l~~~~~~~~~fD~Ii~DPP~~ 296 (385)
T 2b78_A 274 DYFKYARRHHLTYDIIIIDPPSF 296 (385)
T ss_dssp HHHHHHHHTTCCEEEEEECCCCC
T ss_pred HHHHHHHHhCCCccEEEECCCCC
Confidence 742 23799999999984
No 119
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.37 E-value=1.2e-12 Score=104.88 Aligned_cols=79 Identities=25% Similarity=0.437 Sum_probs=68.1
Q ss_pred CCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCC-CCCCCcceeecccCcc
Q 047897 28 INPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALK-TEFPQFDLVVANIPYG 106 (232)
Q Consensus 28 ~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~-~~~~~~D~Vi~n~p~~ 106 (232)
+.++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.+++++..++.. ++++.+|+.+ ++..+||+|++|++.+
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d~~~~~~~~~fD~Vv~n~~~~ 195 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSLEAALPFGPFDLLVANLYAE 195 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCHHHHGGGCCEEEEEEECCHH
T ss_pred cCCCCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChhhcCcCCCCCEEEECCcHH
Confidence 457889999999999999999987779999999999999999999988763 8999999877 3345899999998754
Q ss_pred cc
Q 047897 107 IS 108 (232)
Q Consensus 107 ~~ 108 (232)
..
T Consensus 196 ~~ 197 (254)
T 2nxc_A 196 LH 197 (254)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 120
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.37 E-value=1.1e-12 Score=110.71 Aligned_cols=99 Identities=21% Similarity=0.209 Sum_probs=78.8
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC---
Q 047897 16 QRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE--- 92 (232)
Q Consensus 16 ~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~--- 92 (232)
+.+.+.+++.++.. +.+|||+|||+|.++..+++...+|+|+|+++.+++.|++|+..+++ ++++++.+|+.+..
T Consensus 200 ~~l~~~~~~~~~~~-~~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~~n~~~ng~-~~v~~~~~d~~~~~~~~ 277 (369)
T 3bt7_A 200 IQMLEWALDVTKGS-KGDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAANHI-DNVQIIRMAAEEFTQAM 277 (369)
T ss_dssp HHHHHHHHHHTTTC-CSEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHHHHHHHTTC-CSEEEECCCSHHHHHHH
T ss_pred HHHHHHHHHHhhcC-CCEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECCHHHHHHHH
Confidence 34555666666654 57899999999999999998888999999999999999999999888 58999999997642
Q ss_pred -C--------------CCcceeecccCcccchHHHHHHh
Q 047897 93 -F--------------PQFDLVVANIPYGISSPLVAKLV 116 (232)
Q Consensus 93 -~--------------~~~D~Vi~n~p~~~~~~~l~~~~ 116 (232)
. ..||+|+.|+|+....+.+...+
T Consensus 278 ~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~g~~~~~~~~l 316 (369)
T 3bt7_A 278 NGVREFNRLQGIDLKSYQCETIFVDPPRSGLDSETEKMV 316 (369)
T ss_dssp SSCCCCTTGGGSCGGGCCEEEEEECCCTTCCCHHHHHHH
T ss_pred hhccccccccccccccCCCCEEEECcCccccHHHHHHHH
Confidence 1 26999999999864433333333
No 121
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.37 E-value=2e-12 Score=102.08 Aligned_cols=102 Identities=22% Similarity=0.397 Sum_probs=83.5
Q ss_pred cCCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCC
Q 047897 13 LTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALK 90 (232)
Q Consensus 13 l~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~ 90 (232)
..++.....+...+...++.+|||+|||+|..+..+++. +.+|+++|+++.+++.|++++...++.++++++.+|+.+
T Consensus 37 ~~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 116 (233)
T 2gpy_A 37 IMDLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQ 116 (233)
T ss_dssp CCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGG
T ss_pred CcCHHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHH
Confidence 456777777777776667889999999999999999984 689999999999999999999988876679999999987
Q ss_pred C-C----CCCcceeecccCcccchHHHHH
Q 047897 91 T-E----FPQFDLVVANIPYGISSPLVAK 114 (232)
Q Consensus 91 ~-~----~~~~D~Vi~n~p~~~~~~~l~~ 114 (232)
. + ...||+|+++.+.......+..
T Consensus 117 ~~~~~~~~~~fD~I~~~~~~~~~~~~l~~ 145 (233)
T 2gpy_A 117 LGEKLELYPLFDVLFIDAAKGQYRRFFDM 145 (233)
T ss_dssp SHHHHTTSCCEEEEEEEGGGSCHHHHHHH
T ss_pred HHHhcccCCCccEEEECCCHHHHHHHHHH
Confidence 5 2 2479999998876543434333
No 122
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.37 E-value=2.3e-12 Score=100.96 Aligned_cols=75 Identities=20% Similarity=0.296 Sum_probs=64.3
Q ss_pred CCCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCC-CCCC-Ccceee-ccc
Q 047897 29 NPDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALK-TEFP-QFDLVV-ANI 103 (232)
Q Consensus 29 ~~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~-~~~~-~~D~Vi-~n~ 103 (232)
.++++|+|||||+|.++..++.. ..+|+|+|+++.+++.|++|+..+|+.++++++.+|+++ ++.. +||.|+ +++
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~IviaG~ 93 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAGM 93 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEEEcCC
Confidence 47789999999999999999984 468999999999999999999999997789999999975 4433 599665 444
No 123
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.37 E-value=3.3e-12 Score=103.55 Aligned_cols=92 Identities=18% Similarity=0.267 Sum_probs=79.4
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc---CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC
Q 047897 16 QRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV---SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE 92 (232)
Q Consensus 16 ~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~ 92 (232)
+..+..++..+++.++.+|||+|||+|.++..+++. ..+|+++|+++.+++.+++++...++.++++++.+|+.+..
T Consensus 98 ~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 177 (277)
T 1o54_A 98 PKDSSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGF 177 (277)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCC
T ss_pred HHHHHHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcc
Confidence 455567888888889999999999999999999985 67999999999999999999988877568999999998862
Q ss_pred -CCCcceeecccCccc
Q 047897 93 -FPQFDLVVANIPYGI 107 (232)
Q Consensus 93 -~~~~D~Vi~n~p~~~ 107 (232)
...||+|++|+|..+
T Consensus 178 ~~~~~D~V~~~~~~~~ 193 (277)
T 1o54_A 178 DEKDVDALFLDVPDPW 193 (277)
T ss_dssp SCCSEEEEEECCSCGG
T ss_pred cCCccCEEEECCcCHH
Confidence 247999999998653
No 124
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.37 E-value=4.3e-12 Score=99.57 Aligned_cols=94 Identities=14% Similarity=0.182 Sum_probs=78.0
Q ss_pred ccCCHHHHHHHHHhcC--CCCCCEEEEEcCCccHhHHHHHhc-C--CeEEEEEcCHHHHHHHHHHHhhcCC----CccEE
Q 047897 12 ILTNQRVLDSIVRKSS--INPDDTVLEIGPGTGNLTLKLLEV-S--KKVHAIEIDERMVEILNRRAADSGF----HDRLN 82 (232)
Q Consensus 12 fl~~~~~~~~i~~~~~--~~~~~~vLDiG~G~G~~t~~l~~~-~--~~v~~vD~~~~~~~~a~~~~~~~~~----~~~~~ 82 (232)
.+.++.+...+++.+. +.++.+|||+|||+|.++..+++. + .+|+++|+++.+++.+++++...+. .++++
T Consensus 57 ~~~~p~~~~~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~ 136 (226)
T 1i1n_A 57 TISAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQ 136 (226)
T ss_dssp EECCHHHHHHHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEE
T ss_pred eecCHHHHHHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEE
Confidence 3456888888888886 778899999999999999999884 2 6999999999999999999987553 25799
Q ss_pred EEEcCCCCCCC--CCcceeecccCc
Q 047897 83 VISKDALKTEF--PQFDLVVANIPY 105 (232)
Q Consensus 83 ~~~~D~~~~~~--~~~D~Vi~n~p~ 105 (232)
++.+|+..... .+||+|+++.++
T Consensus 137 ~~~~d~~~~~~~~~~fD~i~~~~~~ 161 (226)
T 1i1n_A 137 LVVGDGRMGYAEEAPYDAIHVGAAA 161 (226)
T ss_dssp EEESCGGGCCGGGCCEEEEEECSBB
T ss_pred EEECCcccCcccCCCcCEEEECCch
Confidence 99999986543 379999988764
No 125
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.37 E-value=1.5e-12 Score=102.79 Aligned_cols=87 Identities=18% Similarity=0.253 Sum_probs=71.1
Q ss_pred HHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC-Cc
Q 047897 18 VLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP-QF 96 (232)
Q Consensus 18 ~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~-~~ 96 (232)
.+..++......+ .+|||+|||+|.++..+++.+.+|+|+|+++.+++.+++++...+...+++++.+|+.+.+.+ +|
T Consensus 55 ~l~~~~~~~~~~~-~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~f 133 (235)
T 3lcc_A 55 LIVHLVDTSSLPL-GRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELF 133 (235)
T ss_dssp HHHHHHHTTCSCC-EEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCE
T ss_pred HHHHHHHhcCCCC-CCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCe
Confidence 4444555555444 499999999999999999888899999999999999999997654446799999999997654 89
Q ss_pred ceeecccCc
Q 047897 97 DLVVANIPY 105 (232)
Q Consensus 97 D~Vi~n~p~ 105 (232)
|+|+++..+
T Consensus 134 D~v~~~~~l 142 (235)
T 3lcc_A 134 DLIFDYVFF 142 (235)
T ss_dssp EEEEEESST
T ss_pred eEEEEChhh
Confidence 999986543
No 126
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.37 E-value=1.3e-12 Score=102.47 Aligned_cols=91 Identities=16% Similarity=0.201 Sum_probs=73.4
Q ss_pred CCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc---CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCC
Q 047897 14 TNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV---SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALK 90 (232)
Q Consensus 14 ~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~ 90 (232)
.++.....+...+...++.+|||+|||+|..+..+++. +.+|+++|+++.+++.+++++...++.++++++++|+.+
T Consensus 48 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 127 (225)
T 3tr6_A 48 TAPEQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKD 127 (225)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHH
Confidence 44554444444444446789999999999999999984 789999999999999999999988886679999999966
Q ss_pred CC-C-------CCcceeecccC
Q 047897 91 TE-F-------PQFDLVVANIP 104 (232)
Q Consensus 91 ~~-~-------~~~D~Vi~n~p 104 (232)
.. . .+||+|+++.+
T Consensus 128 ~~~~~~~~~~~~~fD~v~~~~~ 149 (225)
T 3tr6_A 128 TLAELIHAGQAWQYDLIYIDAD 149 (225)
T ss_dssp HHHHHHTTTCTTCEEEEEECSC
T ss_pred HHHHhhhccCCCCccEEEECCC
Confidence 41 1 57999998765
No 127
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.37 E-value=1.9e-13 Score=109.83 Aligned_cols=86 Identities=16% Similarity=0.138 Sum_probs=69.9
Q ss_pred HHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCH-------HHHHHHHHHHhhcCCCccEEEEEcCCCCC-C-C
Q 047897 23 VRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDE-------RMVEILNRRAADSGFHDRLNVISKDALKT-E-F 93 (232)
Q Consensus 23 ~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~-------~~~~~a~~~~~~~~~~~~~~~~~~D~~~~-~-~ 93 (232)
.+.+...++.+|||+|||+|.++..++..+.+|+|+|+++ .+++.++++....++.++++++++|+.++ + .
T Consensus 76 ~~a~~~~~~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~ 155 (258)
T 2r6z_A 76 AKAVNHTAHPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPAL 155 (258)
T ss_dssp HHHTTGGGCCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHH
T ss_pred HHHhCcCCcCeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhh
Confidence 3334555678999999999999999999888999999999 99999999887666544599999999874 2 1
Q ss_pred ----CCcceeecccCcccc
Q 047897 94 ----PQFDLVVANIPYGIS 108 (232)
Q Consensus 94 ----~~~D~Vi~n~p~~~~ 108 (232)
.+||+|++|+||...
T Consensus 156 ~~~~~~fD~V~~dP~~~~~ 174 (258)
T 2r6z_A 156 VKTQGKPDIVYLDPMYPER 174 (258)
T ss_dssp HHHHCCCSEEEECCCC---
T ss_pred hccCCCccEEEECCCCCCc
Confidence 579999999998653
No 128
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.37 E-value=3.6e-12 Score=103.28 Aligned_cols=92 Identities=27% Similarity=0.356 Sum_probs=80.0
Q ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc---CCeEEEEEcCHHHHHHHHHHHhhc-C-CCccEEEEEcCCC
Q 047897 15 NQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV---SKKVHAIEIDERMVEILNRRAADS-G-FHDRLNVISKDAL 89 (232)
Q Consensus 15 ~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~-~-~~~~~~~~~~D~~ 89 (232)
.+..+..+++.+++.++.+|||+|||+|.++..+++. ..+|+++|+++.+++.+++++... + +.++++++++|+.
T Consensus 84 ~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~ 163 (280)
T 1i9g_A 84 YPKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLA 163 (280)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGG
T ss_pred cHHHHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchH
Confidence 4678888999999999999999999999999999983 689999999999999999999876 4 3368999999998
Q ss_pred CCCC--CCcceeecccCcc
Q 047897 90 KTEF--PQFDLVVANIPYG 106 (232)
Q Consensus 90 ~~~~--~~~D~Vi~n~p~~ 106 (232)
+.+. ..||+|++++|..
T Consensus 164 ~~~~~~~~~D~v~~~~~~~ 182 (280)
T 1i9g_A 164 DSELPDGSVDRAVLDMLAP 182 (280)
T ss_dssp GCCCCTTCEEEEEEESSCG
T ss_pred hcCCCCCceeEEEECCcCH
Confidence 8764 3799999998744
No 129
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.36 E-value=4.8e-12 Score=103.60 Aligned_cols=92 Identities=12% Similarity=0.152 Sum_probs=74.9
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHH---hcCCeEEEEEcCHHHHHHHHHHHhhc-CCCccEEEEEcCCCCC
Q 047897 16 QRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLL---EVSKKVHAIEIDERMVEILNRRAADS-GFHDRLNVISKDALKT 91 (232)
Q Consensus 16 ~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~---~~~~~v~~vD~~~~~~~~a~~~~~~~-~~~~~~~~~~~D~~~~ 91 (232)
+.+.+.+..... .++.+|||||||+|.++..++ ..+.+|+|+|+++.+++.+++++... +...+++++++|+.++
T Consensus 23 ~~~~~~l~~~~~-~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~ 101 (299)
T 3g5t_A 23 SDFYKMIDEYHD-GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDF 101 (299)
T ss_dssp HHHHHHHHHHCC-SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCC
T ss_pred HHHHHHHHHHhc-CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhC
Confidence 566666666543 578899999999999999999 46789999999999999999999876 3336899999999987
Q ss_pred CC--------CCcceeecccCcccc
Q 047897 92 EF--------PQFDLVVANIPYGIS 108 (232)
Q Consensus 92 ~~--------~~~D~Vi~n~p~~~~ 108 (232)
+. .+||+|+++..++..
T Consensus 102 ~~~~~~~~~~~~fD~V~~~~~l~~~ 126 (299)
T 3g5t_A 102 KFLGADSVDKQKIDMITAVECAHWF 126 (299)
T ss_dssp GGGCTTTTTSSCEEEEEEESCGGGS
T ss_pred CccccccccCCCeeEEeHhhHHHHh
Confidence 53 369999998665443
No 130
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.36 E-value=4.6e-12 Score=99.83 Aligned_cols=87 Identities=25% Similarity=0.409 Sum_probs=72.2
Q ss_pred HHHHHHHhcC-CCCCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC
Q 047897 18 VLDSIVRKSS-INPDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP 94 (232)
Q Consensus 18 ~~~~i~~~~~-~~~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~ 94 (232)
..+.+++.+. ..++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.+++++...+ +++++.+|+.+.+.+
T Consensus 31 ~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~~ 107 (234)
T 3dtn_A 31 FYGVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL---KVKYIEADYSKYDFE 107 (234)
T ss_dssp HHHHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT---TEEEEESCTTTCCCC
T ss_pred HHHHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC---CEEEEeCchhccCCC
Confidence 3455566654 457789999999999999999985 7899999999999999999986543 799999999998765
Q ss_pred -CcceeecccCccc
Q 047897 95 -QFDLVVANIPYGI 107 (232)
Q Consensus 95 -~~D~Vi~n~p~~~ 107 (232)
+||+|+++.+++.
T Consensus 108 ~~fD~v~~~~~l~~ 121 (234)
T 3dtn_A 108 EKYDMVVSALSIHH 121 (234)
T ss_dssp SCEEEEEEESCGGG
T ss_pred CCceEEEEeCcccc
Confidence 8999999765443
No 131
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.36 E-value=2.3e-12 Score=100.95 Aligned_cols=74 Identities=23% Similarity=0.310 Sum_probs=64.6
Q ss_pred CCCEEEEEcCCccHhHHHHHh--cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCC-----CCCCcceeecc
Q 047897 30 PDDTVLEIGPGTGNLTLKLLE--VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKT-----EFPQFDLVVAN 102 (232)
Q Consensus 30 ~~~~vLDiG~G~G~~t~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vi~n 102 (232)
++.+|||||||+|.++..+++ ....|+|+|+++.+++.|++++...++ .|++++.+|+.+. +..++|.|+++
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l-~nv~~~~~Da~~~l~~~~~~~~~d~v~~~ 112 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGL-SNLRVMCHDAVEVLHKMIPDNSLRMVQLF 112 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTC-SSEEEECSCHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCC-CcEEEEECCHHHHHHHHcCCCChheEEEe
Confidence 567999999999999999998 357899999999999999999988887 5799999999873 34589999998
Q ss_pred cC
Q 047897 103 IP 104 (232)
Q Consensus 103 ~p 104 (232)
.|
T Consensus 113 ~~ 114 (218)
T 3dxy_A 113 FP 114 (218)
T ss_dssp SC
T ss_pred CC
Confidence 44
No 132
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.36 E-value=2.5e-12 Score=101.13 Aligned_cols=94 Identities=19% Similarity=0.230 Sum_probs=77.7
Q ss_pred cccCCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc---CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcC
Q 047897 11 HILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV---SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKD 87 (232)
Q Consensus 11 ~fl~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D 87 (232)
.+..++...+.+...+...++.+|||+|||+|..+..+++. +.+|+++|+++.+++.+++++...++.++++++++|
T Consensus 50 ~~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d 129 (229)
T 2avd_A 50 DSMMTCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKP 129 (229)
T ss_dssp GGSCCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESC
T ss_pred CCccCHHHHHHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcC
Confidence 35566776666655555567889999999999999999983 689999999999999999999988876789999999
Q ss_pred CCCC--CC------CCcceeecccC
Q 047897 88 ALKT--EF------PQFDLVVANIP 104 (232)
Q Consensus 88 ~~~~--~~------~~~D~Vi~n~p 104 (232)
+.+. .. .+||+|+++.+
T Consensus 130 ~~~~~~~~~~~~~~~~~D~v~~d~~ 154 (229)
T 2avd_A 130 ALETLDELLAAGEAGTFDVAVVDAD 154 (229)
T ss_dssp HHHHHHHHHHTTCTTCEEEEEECSC
T ss_pred HHHHHHHHHhcCCCCCccEEEECCC
Confidence 8764 11 57999999876
No 133
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.36 E-value=3.8e-12 Score=106.04 Aligned_cols=93 Identities=25% Similarity=0.399 Sum_probs=76.0
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc-C--CeEEEEEcCHHHHHHHHHHHhhcC----------CCccEE
Q 047897 16 QRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV-S--KKVHAIEIDERMVEILNRRAADSG----------FHDRLN 82 (232)
Q Consensus 16 ~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~-~--~~v~~vD~~~~~~~~a~~~~~~~~----------~~~~~~ 82 (232)
+.....+++.+++.++.+|||+|||+|.++..+++. + .+|+|+|+++.+++.|++++...+ ...+++
T Consensus 91 ~~~~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~ 170 (336)
T 2b25_A 91 PKDINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVD 170 (336)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEE
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceE
Confidence 666788888888899999999999999999999984 3 899999999999999999987532 225799
Q ss_pred EEEcCCCCC--CC--CCcceeecccCcccc
Q 047897 83 VISKDALKT--EF--PQFDLVVANIPYGIS 108 (232)
Q Consensus 83 ~~~~D~~~~--~~--~~~D~Vi~n~p~~~~ 108 (232)
++.+|+.+. +. .+||+|++++|....
T Consensus 171 ~~~~d~~~~~~~~~~~~fD~V~~~~~~~~~ 200 (336)
T 2b25_A 171 FIHKDISGATEDIKSLTFDAVALDMLNPHV 200 (336)
T ss_dssp EEESCTTCCC-------EEEEEECSSSTTT
T ss_pred EEECChHHcccccCCCCeeEEEECCCCHHH
Confidence 999999886 22 369999998875433
No 134
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.36 E-value=9.6e-12 Score=98.10 Aligned_cols=87 Identities=18% Similarity=0.258 Sum_probs=69.7
Q ss_pred HHHHHHHHHhcC---CCCCCEEEEEcCCccHhHHHHHh---cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCC
Q 047897 16 QRVLDSIVRKSS---INPDDTVLEIGPGTGNLTLKLLE---VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDAL 89 (232)
Q Consensus 16 ~~~~~~i~~~~~---~~~~~~vLDiG~G~G~~t~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~ 89 (232)
..+...++..++ +.++++|||+|||+|..+..+++ ...+|+|+|+++.+++.+.+..... .|+.++.+|+.
T Consensus 59 skla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r---~nv~~i~~Da~ 135 (232)
T 3id6_C 59 SKLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR---PNIFPLLADAR 135 (232)
T ss_dssp CHHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC---TTEEEEECCTT
T ss_pred HHHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc---CCeEEEEcccc
Confidence 467777777665 78999999999999999999988 3569999999999876665555432 47999999997
Q ss_pred CCC-----CCCcceeecccCc
Q 047897 90 KTE-----FPQFDLVVANIPY 105 (232)
Q Consensus 90 ~~~-----~~~~D~Vi~n~p~ 105 (232)
... .++||+|++|.+.
T Consensus 136 ~~~~~~~~~~~~D~I~~d~a~ 156 (232)
T 3id6_C 136 FPQSYKSVVENVDVLYVDIAQ 156 (232)
T ss_dssp CGGGTTTTCCCEEEEEECCCC
T ss_pred cchhhhccccceEEEEecCCC
Confidence 642 2479999999875
No 135
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.35 E-value=1.7e-12 Score=110.53 Aligned_cols=94 Identities=17% Similarity=0.221 Sum_probs=76.2
Q ss_pred ccCCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc-CCeEEEEEcCHHHHHHHHHHHhhcCC-CccEEEEEcCCC
Q 047897 12 ILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV-SKKVHAIEIDERMVEILNRRAADSGF-HDRLNVISKDAL 89 (232)
Q Consensus 12 fl~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~~~D~~ 89 (232)
|+.++.....++..+ .++.+|||+|||+|.++..++.. ..+|+|+|+++.+++.|++++..+++ .++++++++|+.
T Consensus 204 ff~~~~~~~~~l~~~--~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~ 281 (396)
T 3c0k_A 204 YYLDQRDSRLATRRY--VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVF 281 (396)
T ss_dssp SCGGGHHHHHHHHHH--CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHH
T ss_pred cCcCHHHHHHHHHHh--hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHH
Confidence 343444444444444 47789999999999999999996 46999999999999999999998887 558999999998
Q ss_pred CCC------CCCcceeecccCccc
Q 047897 90 KTE------FPQFDLVVANIPYGI 107 (232)
Q Consensus 90 ~~~------~~~~D~Vi~n~p~~~ 107 (232)
+.. ...||+|++|+|+..
T Consensus 282 ~~~~~~~~~~~~fD~Ii~dpP~~~ 305 (396)
T 3c0k_A 282 KLLRTYRDRGEKFDVIVMDPPKFV 305 (396)
T ss_dssp HHHHHHHHTTCCEEEEEECCSSTT
T ss_pred HHHHHHHhcCCCCCEEEECCCCCC
Confidence 753 247999999999744
No 136
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.35 E-value=2.4e-12 Score=102.85 Aligned_cols=87 Identities=21% Similarity=0.211 Sum_probs=74.7
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCC
Q 047897 16 QRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEF 93 (232)
Q Consensus 16 ~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~ 93 (232)
......+++.+...++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.++++. ++++++.+|+.+++.
T Consensus 19 ~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~------~~~~~~~~d~~~~~~ 92 (259)
T 2p35_A 19 TRPARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL------PNTNFGKADLATWKP 92 (259)
T ss_dssp GHHHHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS------TTSEEEECCTTTCCC
T ss_pred HHHHHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC------CCcEEEECChhhcCc
Confidence 466778888888888899999999999999999985 889999999999999999882 579999999998763
Q ss_pred -CCcceeecccCcccc
Q 047897 94 -PQFDLVVANIPYGIS 108 (232)
Q Consensus 94 -~~~D~Vi~n~p~~~~ 108 (232)
.+||+|+++..++..
T Consensus 93 ~~~fD~v~~~~~l~~~ 108 (259)
T 2p35_A 93 AQKADLLYANAVFQWV 108 (259)
T ss_dssp SSCEEEEEEESCGGGS
T ss_pred cCCcCEEEEeCchhhC
Confidence 379999998776654
No 137
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.35 E-value=2.9e-12 Score=106.47 Aligned_cols=86 Identities=20% Similarity=0.430 Sum_probs=71.8
Q ss_pred HHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcC-CeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC--C
Q 047897 19 LDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVS-KKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP--Q 95 (232)
Q Consensus 19 ~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~--~ 95 (232)
.+.+.+.+...++.+|||+|||+|.++..+++.+ .+|+|+|++ .+++.|++++...++.++++++++|+.+.+.+ +
T Consensus 27 ~~ai~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 105 (328)
T 1g6q_1 27 RNAIIQNKDLFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPK 105 (328)
T ss_dssp HHHHHHHHHHHTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSC
T ss_pred HHHHHhhHhhcCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCc
Confidence 3444444445578899999999999999999865 599999999 59999999999888877899999999987654 7
Q ss_pred cceeecccCc
Q 047897 96 FDLVVANIPY 105 (232)
Q Consensus 96 ~D~Vi~n~p~ 105 (232)
||+|+++.+.
T Consensus 106 ~D~Ivs~~~~ 115 (328)
T 1g6q_1 106 VDIIISEWMG 115 (328)
T ss_dssp EEEEEECCCB
T ss_pred ccEEEEeCch
Confidence 9999998763
No 138
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.35 E-value=8.3e-13 Score=107.05 Aligned_cols=88 Identities=19% Similarity=0.181 Sum_probs=74.4
Q ss_pred HHHHHhcCCCCCCEEEEEcCCccHhHHHHHh--cC-CeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC----
Q 047897 20 DSIVRKSSINPDDTVLEIGPGTGNLTLKLLE--VS-KKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE---- 92 (232)
Q Consensus 20 ~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~--~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~---- 92 (232)
..+...+++.++++|||+|||+|..|..+++ .+ .+|+|+|+++.+++.+++++...|+ .+++++++|+.+++
T Consensus 73 ~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~-~~v~~~~~D~~~~~~~~~ 151 (274)
T 3ajd_A 73 MIPPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGV-LNTIIINADMRKYKDYLL 151 (274)
T ss_dssp GHHHHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEESCHHHHHHHHH
T ss_pred HHHHHHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCC-CcEEEEeCChHhcchhhh
Confidence 3445566778899999999999999999987 34 7999999999999999999999887 48999999998764
Q ss_pred --CCCcceeecccCcccc
Q 047897 93 --FPQFDLVVANIPYGIS 108 (232)
Q Consensus 93 --~~~~D~Vi~n~p~~~~ 108 (232)
...||.|++|+|+...
T Consensus 152 ~~~~~fD~Vl~d~Pcs~~ 169 (274)
T 3ajd_A 152 KNEIFFDKILLDAPCSGN 169 (274)
T ss_dssp HTTCCEEEEEEEECCC--
T ss_pred hccccCCEEEEcCCCCCC
Confidence 3479999999998653
No 139
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.35 E-value=6.7e-12 Score=98.87 Aligned_cols=90 Identities=16% Similarity=0.234 Sum_probs=73.8
Q ss_pred HHHHHHHH---hcCCCCCCEEEEEcCCccHhHHHHHh---cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCC
Q 047897 17 RVLDSIVR---KSSINPDDTVLEIGPGTGNLTLKLLE---VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALK 90 (232)
Q Consensus 17 ~~~~~i~~---~~~~~~~~~vLDiG~G~G~~t~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~ 90 (232)
++.+.++. .+.+++|++|||+|||+|.++..+++ ...+|+|+|++++|++.+++++... +|+..+.+|+.+
T Consensus 61 klaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~---~ni~~V~~d~~~ 137 (233)
T 4df3_A 61 KLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR---RNIFPILGDARF 137 (233)
T ss_dssp HHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC---TTEEEEESCTTC
T ss_pred HHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh---cCeeEEEEeccC
Confidence 45666665 35688999999999999999999998 4589999999999999999988764 579999999876
Q ss_pred CC-----CCCcceeecccCcccch
Q 047897 91 TE-----FPQFDLVVANIPYGISS 109 (232)
Q Consensus 91 ~~-----~~~~D~Vi~n~p~~~~~ 109 (232)
.. .+.+|+|+++++++...
T Consensus 138 p~~~~~~~~~vDvVf~d~~~~~~~ 161 (233)
T 4df3_A 138 PEKYRHLVEGVDGLYADVAQPEQA 161 (233)
T ss_dssp GGGGTTTCCCEEEEEECCCCTTHH
T ss_pred ccccccccceEEEEEEeccCChhH
Confidence 42 23689999998876553
No 140
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.35 E-value=3.5e-12 Score=103.33 Aligned_cols=88 Identities=20% Similarity=0.317 Sum_probs=70.0
Q ss_pred HHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc---CCeEEEEEcCHHHHHHHHHHHhhc-CCCccEEEEEcCCCCCCC
Q 047897 18 VLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV---SKKVHAIEIDERMVEILNRRAADS-GFHDRLNVISKDALKTEF 93 (232)
Q Consensus 18 ~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~-~~~~~~~~~~~D~~~~~~ 93 (232)
.++.+++.+++.++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.+++++... |. ++++++.+|+.+...
T Consensus 98 ~~~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~-~~v~~~~~d~~~~~~ 176 (275)
T 1yb2_A 98 DASYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI-GNVRTSRSDIADFIS 176 (275)
T ss_dssp --------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC-TTEEEECSCTTTCCC
T ss_pred hHHHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC-CcEEEEECchhccCc
Confidence 3446677778888999999999999999999885 689999999999999999999887 75 589999999988422
Q ss_pred -CCcceeecccCcc
Q 047897 94 -PQFDLVVANIPYG 106 (232)
Q Consensus 94 -~~~D~Vi~n~p~~ 106 (232)
.+||+|++++|..
T Consensus 177 ~~~fD~Vi~~~~~~ 190 (275)
T 1yb2_A 177 DQMYDAVIADIPDP 190 (275)
T ss_dssp SCCEEEEEECCSCG
T ss_pred CCCccEEEEcCcCH
Confidence 3799999988743
No 141
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.35 E-value=1.6e-12 Score=103.20 Aligned_cols=74 Identities=16% Similarity=0.244 Sum_probs=65.1
Q ss_pred CCCCEEEEEcCCccHhHHHHHh--cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCC-----CCcceeec
Q 047897 29 NPDDTVLEIGPGTGNLTLKLLE--VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEF-----PQFDLVVA 101 (232)
Q Consensus 29 ~~~~~vLDiG~G~G~~t~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~-----~~~D~Vi~ 101 (232)
.++.+|||+|||+|.++..++. .+.+|+|+|+++.+++.++++....++ ++++++++|+.+++. ++||+|++
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~fD~V~~ 147 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQL-ENTTFCHDRAETFGQRKDVRESYDIVTA 147 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTC-SSEEEEESCHHHHTTCTTTTTCEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC-CCEEEEeccHHHhcccccccCCccEEEE
Confidence 4678999999999999999985 578999999999999999999998887 479999999987652 47999998
Q ss_pred cc
Q 047897 102 NI 103 (232)
Q Consensus 102 n~ 103 (232)
+.
T Consensus 148 ~~ 149 (240)
T 1xdz_A 148 RA 149 (240)
T ss_dssp EC
T ss_pred ec
Confidence 65
No 142
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.35 E-value=1.9e-12 Score=109.83 Aligned_cols=78 Identities=12% Similarity=0.076 Sum_probs=69.3
Q ss_pred CCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhc--CCCccEEEEEcCCCCC-CC---CCcceeeccc
Q 047897 30 PDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADS--GFHDRLNVISKDALKT-EF---PQFDLVVANI 103 (232)
Q Consensus 30 ~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~~~~~~~~~~D~~~~-~~---~~~D~Vi~n~ 103 (232)
++.+|||+|||+|..+..+++.+.+|+|+|+|+.+++.+++|+... |+ ++++++++|+.+. +. .+||+|++||
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~N~~~~~~gl-~~i~~i~~Da~~~L~~~~~~~fDvV~lDP 171 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARHNIPLLLNEG-KDVNILTGDFKEYLPLIKTFHPDYIYVDP 171 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHSCTT-CEEEEEESCGGGSHHHHHHHCCSEEEECC
T ss_pred CCCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHhHHHhccCC-CcEEEEECcHHHhhhhccCCCceEEEECC
Confidence 4889999999999999999998899999999999999999999987 77 6899999999985 22 3799999999
Q ss_pred Ccccc
Q 047897 104 PYGIS 108 (232)
Q Consensus 104 p~~~~ 108 (232)
||...
T Consensus 172 Prr~~ 176 (410)
T 3ll7_A 172 ARRSG 176 (410)
T ss_dssp EEC--
T ss_pred CCcCC
Confidence 99763
No 143
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.35 E-value=2.7e-12 Score=107.53 Aligned_cols=77 Identities=21% Similarity=0.382 Sum_probs=67.6
Q ss_pred CCCCCCEEEEEcCCccHhHHHHHhcC-CeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC--Ccceeeccc
Q 047897 27 SINPDDTVLEIGPGTGNLTLKLLEVS-KKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP--QFDLVVANI 103 (232)
Q Consensus 27 ~~~~~~~vLDiG~G~G~~t~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~--~~D~Vi~n~ 103 (232)
.+.++.+|||+|||+|.++..+++.+ .+|+|+|++ ++++.|++++...++.++++++++|+.+.+.+ +||+|+++.
T Consensus 63 ~~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~ 141 (349)
T 3q7e_A 63 HLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEW 141 (349)
T ss_dssp HHHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECC
T ss_pred ccCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcc
Confidence 34578899999999999999999964 599999999 49999999999988877799999999988654 899999986
Q ss_pred C
Q 047897 104 P 104 (232)
Q Consensus 104 p 104 (232)
+
T Consensus 142 ~ 142 (349)
T 3q7e_A 142 M 142 (349)
T ss_dssp C
T ss_pred c
Confidence 4
No 144
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.34 E-value=3.4e-12 Score=106.71 Aligned_cols=88 Identities=18% Similarity=0.312 Sum_probs=76.1
Q ss_pred HHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcC--CeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCCC
Q 047897 18 VLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVS--KKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFPQ 95 (232)
Q Consensus 18 ~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~~ 95 (232)
..+.+++.+...++.+|||+|||+|.++..+++.+ .+|+++|+|+.+++.+++++...+.. .+++.+|+.+...++
T Consensus 184 ~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~--~~~~~~d~~~~~~~~ 261 (343)
T 2pjd_A 184 GSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVE--GEVFASNVFSEVKGR 261 (343)
T ss_dssp HHHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCC--CEEEECSTTTTCCSC
T ss_pred HHHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC--CEEEEccccccccCC
Confidence 56777788866667899999999999999998843 69999999999999999999887753 678999998876668
Q ss_pred cceeecccCccc
Q 047897 96 FDLVVANIPYGI 107 (232)
Q Consensus 96 ~D~Vi~n~p~~~ 107 (232)
||+|++|+||+.
T Consensus 262 fD~Iv~~~~~~~ 273 (343)
T 2pjd_A 262 FDMIISNPPFHD 273 (343)
T ss_dssp EEEEEECCCCCS
T ss_pred eeEEEECCCccc
Confidence 999999999985
No 145
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.34 E-value=4.1e-12 Score=99.93 Aligned_cols=95 Identities=15% Similarity=0.262 Sum_probs=77.8
Q ss_pred cccccCCHHHHHHHHHhc--CCCCCCEEEEEcCCccHhHHHHHhc-C-------CeEEEEEcCHHHHHHHHHHHhhcC--
Q 047897 9 GQHILTNQRVLDSIVRKS--SINPDDTVLEIGPGTGNLTLKLLEV-S-------KKVHAIEIDERMVEILNRRAADSG-- 76 (232)
Q Consensus 9 gq~fl~~~~~~~~i~~~~--~~~~~~~vLDiG~G~G~~t~~l~~~-~-------~~v~~vD~~~~~~~~a~~~~~~~~-- 76 (232)
|| .+..|.+...+++.+ .+.++.+|||+|||+|.++..+++. + .+|+++|+++.+++.+++++...+
T Consensus 62 ~~-~~~~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~ 140 (227)
T 1r18_A 62 GV-TISAPHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRS 140 (227)
T ss_dssp TE-EECCHHHHHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred CC-ccCChHHHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCcc
Confidence 44 344688899999988 4778899999999999999999882 3 599999999999999999987654
Q ss_pred ---CCccEEEEEcCCCCC-CC-CCcceeecccCc
Q 047897 77 ---FHDRLNVISKDALKT-EF-PQFDLVVANIPY 105 (232)
Q Consensus 77 ---~~~~~~~~~~D~~~~-~~-~~~D~Vi~n~p~ 105 (232)
. .+++++.+|+.+. +. .+||+|+++.+.
T Consensus 141 ~~~~-~~v~~~~~d~~~~~~~~~~fD~I~~~~~~ 173 (227)
T 1r18_A 141 MLDS-GQLLIVEGDGRKGYPPNAPYNAIHVGAAA 173 (227)
T ss_dssp HHHH-TSEEEEESCGGGCCGGGCSEEEEEECSCB
T ss_pred ccCC-CceEEEECCcccCCCcCCCccEEEECCch
Confidence 2 4799999999873 22 479999987654
No 146
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.34 E-value=3.3e-12 Score=105.57 Aligned_cols=90 Identities=14% Similarity=0.149 Sum_probs=76.4
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc---CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCC
Q 047897 17 RVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV---SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEF 93 (232)
Q Consensus 17 ~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~ 93 (232)
.....+...+++.++.+|||+|||+|..|..+++. ..+|+|+|+++.+++.+++++...|+ .+++++++|+.+++.
T Consensus 105 ~~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~-~~v~~~~~D~~~~~~ 183 (315)
T 1ixk_A 105 ASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGV-LNVILFHSSSLHIGE 183 (315)
T ss_dssp HHHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTC-CSEEEESSCGGGGGG
T ss_pred HHHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CeEEEEECChhhccc
Confidence 44444556678889999999999999999999973 47999999999999999999998887 479999999988753
Q ss_pred --CCcceeecccCccc
Q 047897 94 --PQFDLVVANIPYGI 107 (232)
Q Consensus 94 --~~~D~Vi~n~p~~~ 107 (232)
..||.|++|+|+..
T Consensus 184 ~~~~fD~Il~d~Pcsg 199 (315)
T 1ixk_A 184 LNVEFDKILLDAPCTG 199 (315)
T ss_dssp GCCCEEEEEEECCTTS
T ss_pred ccccCCEEEEeCCCCC
Confidence 37999999999643
No 147
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.34 E-value=1.5e-12 Score=105.52 Aligned_cols=86 Identities=21% Similarity=0.263 Sum_probs=73.0
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC-
Q 047897 16 QRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP- 94 (232)
Q Consensus 16 ~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~- 94 (232)
+.+.+.+++.+.+.++.+|||||||+|.++..+++.+.+|+|+|+++.+++.++++. +++.++.+|+.+++.+
T Consensus 43 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~ 116 (279)
T 3ccf_A 43 WQYGEDLLQLLNPQPGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQNY------PHLHFDVADARNFRVDK 116 (279)
T ss_dssp SSSCCHHHHHHCCCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHC------TTSCEEECCTTTCCCSS
T ss_pred HHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHhhC------CCCEEEECChhhCCcCC
Confidence 345556677777778899999999999999999998899999999999999999875 4688999999988765
Q ss_pred CcceeecccCccc
Q 047897 95 QFDLVVANIPYGI 107 (232)
Q Consensus 95 ~~D~Vi~n~p~~~ 107 (232)
+||+|+++..++.
T Consensus 117 ~fD~v~~~~~l~~ 129 (279)
T 3ccf_A 117 PLDAVFSNAMLHW 129 (279)
T ss_dssp CEEEEEEESCGGG
T ss_pred CcCEEEEcchhhh
Confidence 7999999766543
No 148
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.34 E-value=5.2e-12 Score=98.56 Aligned_cols=76 Identities=17% Similarity=0.215 Sum_probs=65.8
Q ss_pred CCCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC----CCCcceeecc
Q 047897 29 NPDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE----FPQFDLVVAN 102 (232)
Q Consensus 29 ~~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~----~~~~D~Vi~n 102 (232)
.++.+|||||||+|.++..+++. +.+|+|+|+++.+++.|++++...++ ++++++++|+.+++ ..++|.|+++
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~-~nv~~~~~d~~~l~~~~~~~~~d~v~~~ 115 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEA-QNVKLLNIDADTLTDVFEPGEVKRVYLN 115 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCC-SSEEEECCCGGGHHHHCCTTSCCEEEEE
T ss_pred CCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhcCcCCcCEEEEE
Confidence 35779999999999999999883 68999999999999999999988887 58999999998753 3479999887
Q ss_pred cCc
Q 047897 103 IPY 105 (232)
Q Consensus 103 ~p~ 105 (232)
.|.
T Consensus 116 ~~~ 118 (213)
T 2fca_A 116 FSD 118 (213)
T ss_dssp SCC
T ss_pred CCC
Confidence 654
No 149
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.34 E-value=2.3e-12 Score=103.03 Aligned_cols=74 Identities=18% Similarity=0.173 Sum_probs=65.5
Q ss_pred CCCCEEEEEcCCccHhHHHHHh--cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCC-----CCcceeec
Q 047897 29 NPDDTVLEIGPGTGNLTLKLLE--VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEF-----PQFDLVVA 101 (232)
Q Consensus 29 ~~~~~vLDiG~G~G~~t~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~-----~~~D~Vi~ 101 (232)
.++.+|||||||+|..+..++. ...+|+++|+++.+++.+++++...++ .+++++++|+.+++. ++||+|++
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l-~~v~~~~~d~~~~~~~~~~~~~fD~I~s 157 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGL-KGARALWGRAEVLAREAGHREAYARAVA 157 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTC-SSEEEEECCHHHHTTSTTTTTCEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC-CceEEEECcHHHhhcccccCCCceEEEE
Confidence 4678999999999999999887 468999999999999999999999888 469999999988653 47999998
Q ss_pred cc
Q 047897 102 NI 103 (232)
Q Consensus 102 n~ 103 (232)
+.
T Consensus 158 ~a 159 (249)
T 3g89_A 158 RA 159 (249)
T ss_dssp ES
T ss_pred CC
Confidence 64
No 150
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.33 E-value=4.3e-12 Score=103.89 Aligned_cols=86 Identities=22% Similarity=0.378 Sum_probs=72.8
Q ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCC--ccEEEEEcCCCCCC
Q 047897 15 NQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFH--DRLNVISKDALKTE 92 (232)
Q Consensus 15 ~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~--~~~~~~~~D~~~~~ 92 (232)
.......+++.+...++ +|||||||+|.++..+++.+.+|+|+|+|+.+++.+++++...+.. .+++++++|+.+++
T Consensus 68 ~~~~~~~~~~~~~~~~~-~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~ 146 (299)
T 3g2m_A 68 GTSEAREFATRTGPVSG-PVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFA 146 (299)
T ss_dssp CHHHHHHHHHHHCCCCS-CEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCC
T ss_pred ccHHHHHHHHhhCCCCC-cEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCC
Confidence 45677778887765444 8999999999999999998899999999999999999999876531 47999999999987
Q ss_pred CC-Ccceeec
Q 047897 93 FP-QFDLVVA 101 (232)
Q Consensus 93 ~~-~~D~Vi~ 101 (232)
.+ +||+|++
T Consensus 147 ~~~~fD~v~~ 156 (299)
T 3g2m_A 147 LDKRFGTVVI 156 (299)
T ss_dssp CSCCEEEEEE
T ss_pred cCCCcCEEEE
Confidence 65 7998874
No 151
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.33 E-value=2.9e-12 Score=103.42 Aligned_cols=89 Identities=24% Similarity=0.270 Sum_probs=73.8
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc-C--CeEEEEEcCHH------HHHHHHHHHhhcCCCccEEEEEcC
Q 047897 17 RVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV-S--KKVHAIEIDER------MVEILNRRAADSGFHDRLNVISKD 87 (232)
Q Consensus 17 ~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~-~--~~v~~vD~~~~------~~~~a~~~~~~~~~~~~~~~~~~D 87 (232)
.....+++.+.+.++.+|||||||+|.++..+++. + .+|+|+|+++. +++.+++++...++.++++++.+|
T Consensus 30 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d 109 (275)
T 3bkx_A 30 AHRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNT 109 (275)
T ss_dssp HHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSC
T ss_pred HHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECC
Confidence 45567777888889999999999999999999984 3 89999999997 999999999887776689999998
Q ss_pred -C--CCCCC--CCcceeecccCc
Q 047897 88 -A--LKTEF--PQFDLVVANIPY 105 (232)
Q Consensus 88 -~--~~~~~--~~~D~Vi~n~p~ 105 (232)
. ...++ .+||+|+++.++
T Consensus 110 ~~~~~~~~~~~~~fD~v~~~~~l 132 (275)
T 3bkx_A 110 NLSDDLGPIADQHFDRVVLAHSL 132 (275)
T ss_dssp CTTTCCGGGTTCCCSEEEEESCG
T ss_pred hhhhccCCCCCCCEEEEEEccch
Confidence 3 33333 479999987654
No 152
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.33 E-value=2.7e-12 Score=101.83 Aligned_cols=92 Identities=16% Similarity=0.217 Sum_probs=76.4
Q ss_pred cCCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc---CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCC
Q 047897 13 LTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV---SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDAL 89 (232)
Q Consensus 13 l~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~ 89 (232)
..++...+.+...+...++.+|||||||+|..+..+++. +.+|+++|+++.+++.|++++...+..++++++.+|+.
T Consensus 43 ~~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~ 122 (239)
T 2hnk_A 43 QISPEEGQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSAL 122 (239)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH
T ss_pred ccCHHHHHHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHH
Confidence 455777777777666667889999999999999999984 68999999999999999999988887567999999987
Q ss_pred CC-C-----------------C-CCcceeecccC
Q 047897 90 KT-E-----------------F-PQFDLVVANIP 104 (232)
Q Consensus 90 ~~-~-----------------~-~~~D~Vi~n~p 104 (232)
+. + . .+||+|+++..
T Consensus 123 ~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~ 156 (239)
T 2hnk_A 123 ETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDAD 156 (239)
T ss_dssp HHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSC
T ss_pred HHHHHHHhhcccccccccccCCCCCcCEEEEeCC
Confidence 63 1 1 57999998743
No 153
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.33 E-value=3.9e-12 Score=108.35 Aligned_cols=96 Identities=25% Similarity=0.341 Sum_probs=78.7
Q ss_pred cccCCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc-CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCC
Q 047897 11 HILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV-SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDAL 89 (232)
Q Consensus 11 ~fl~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~ 89 (232)
.|+.++.....++..+ ..++.+|||+|||+|.++..++.. ..+|+|+|+++.+++.|++++..+++.++++++++|+.
T Consensus 199 g~f~~~~~~~~~~~~~-~~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~ 277 (396)
T 2as0_A 199 GFFLDQRENRLALEKW-VQPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAF 277 (396)
T ss_dssp CCCSTTHHHHHHHGGG-CCTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH
T ss_pred CccCCHHHHHHHHHHH-hhCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHH
Confidence 3555555556665544 247889999999999999999986 46999999999999999999999887558999999998
Q ss_pred CCC------CCCcceeecccCccc
Q 047897 90 KTE------FPQFDLVVANIPYGI 107 (232)
Q Consensus 90 ~~~------~~~~D~Vi~n~p~~~ 107 (232)
+.. ..+||+|++|+|+..
T Consensus 278 ~~~~~~~~~~~~fD~Vi~dpP~~~ 301 (396)
T 2as0_A 278 EEMEKLQKKGEKFDIVVLDPPAFV 301 (396)
T ss_dssp HHHHHHHHTTCCEEEEEECCCCSC
T ss_pred HHHHHHHhhCCCCCEEEECCCCCC
Confidence 753 247999999999754
No 154
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.32 E-value=5e-12 Score=97.78 Aligned_cols=85 Identities=14% Similarity=0.263 Sum_probs=70.0
Q ss_pred HHHHHHHhcCCC---CCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC
Q 047897 18 VLDSIVRKSSIN---PDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE 92 (232)
Q Consensus 18 ~~~~i~~~~~~~---~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~ 92 (232)
+.+.+++.+... ++.+|||+|||+|.++..++.. +.+++|+|+++.+++.+++++...++. +++++++|+.+.+
T Consensus 50 ~~~~~~~~l~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~ 128 (207)
T 1jsx_A 50 LVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLE-NIEPVQSRVEEFP 128 (207)
T ss_dssp HHHHHHHHHHHGGGCCSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCS-SEEEEECCTTTSC
T ss_pred HHHHHHhhhhhhhhcCCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEecchhhCC
Confidence 455555554322 3789999999999999999983 689999999999999999999988773 5999999999876
Q ss_pred C-CCcceeeccc
Q 047897 93 F-PQFDLVVANI 103 (232)
Q Consensus 93 ~-~~~D~Vi~n~ 103 (232)
. .+||+|+++.
T Consensus 129 ~~~~~D~i~~~~ 140 (207)
T 1jsx_A 129 SEPPFDGVISRA 140 (207)
T ss_dssp CCSCEEEEECSC
T ss_pred ccCCcCEEEEec
Confidence 3 4799999864
No 155
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.32 E-value=6.5e-12 Score=99.05 Aligned_cols=86 Identities=21% Similarity=0.350 Sum_probs=70.5
Q ss_pred HHHHHH---HHhcCCCCCCEEEEEcCCccHhHHHHHhcC--CeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCC-
Q 047897 17 RVLDSI---VRKSSINPDDTVLEIGPGTGNLTLKLLEVS--KKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALK- 90 (232)
Q Consensus 17 ~~~~~i---~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~- 90 (232)
.+++.+ ++.+.+.++.+|||+|||+|.++..+++.. .+|+|+|+++.+++.+++++... +++.++.+|+.+
T Consensus 58 ~~~~~i~~~l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~ 134 (230)
T 1fbn_A 58 KLAAAIIKGLKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER---ENIIPILGDANKP 134 (230)
T ss_dssp HHHHHHHTTCCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC---TTEEEEECCTTCG
T ss_pred HHHHHHHhcccccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC---CCeEEEECCCCCc
Confidence 344666 555566788999999999999999999853 79999999999999999998654 579999999987
Q ss_pred ---CCC-CCcceeecccCc
Q 047897 91 ---TEF-PQFDLVVANIPY 105 (232)
Q Consensus 91 ---~~~-~~~D~Vi~n~p~ 105 (232)
.+. ..||+|+.+++.
T Consensus 135 ~~~~~~~~~~D~v~~~~~~ 153 (230)
T 1fbn_A 135 QEYANIVEKVDVIYEDVAQ 153 (230)
T ss_dssp GGGTTTSCCEEEEEECCCS
T ss_pred ccccccCccEEEEEEecCC
Confidence 544 479999977653
No 156
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.32 E-value=3e-12 Score=99.91 Aligned_cols=82 Identities=30% Similarity=0.428 Sum_probs=69.2
Q ss_pred HHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC-Ccce
Q 047897 20 DSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP-QFDL 98 (232)
Q Consensus 20 ~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~-~~D~ 98 (232)
..+++.+...++.+|||+|||+|.++..+++.+.+++|+|+++.+++.+++++. .+++++.+|+.+++.+ +||+
T Consensus 35 ~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~d~~~~~~~~~fD~ 109 (220)
T 3hnr_A 35 EDILEDVVNKSFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAKEKLP-----KEFSITEGDFLSFEVPTSIDT 109 (220)
T ss_dssp HHHHHHHHHTCCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHHHHSC-----TTCCEESCCSSSCCCCSCCSE
T ss_pred HHHHHHhhccCCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCC-----CceEEEeCChhhcCCCCCeEE
Confidence 345555555578899999999999999999988999999999999999999874 3689999999998764 8999
Q ss_pred eecccCcc
Q 047897 99 VVANIPYG 106 (232)
Q Consensus 99 Vi~n~p~~ 106 (232)
|+++..++
T Consensus 110 v~~~~~l~ 117 (220)
T 3hnr_A 110 IVSTYAFH 117 (220)
T ss_dssp EEEESCGG
T ss_pred EEECcchh
Confidence 99976543
No 157
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.32 E-value=4.2e-12 Score=104.32 Aligned_cols=80 Identities=20% Similarity=0.191 Sum_probs=69.6
Q ss_pred CCCCCCEEEEEcCCccHhHHHHH--h-cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC-Ccceeecc
Q 047897 27 SINPDDTVLEIGPGTGNLTLKLL--E-VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP-QFDLVVAN 102 (232)
Q Consensus 27 ~~~~~~~vLDiG~G~G~~t~~l~--~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~-~~D~Vi~n 102 (232)
.+.++.+|||||||+|.++..++ . .+.+|+|+|+|+.+++.+++++...++.++++++++|+.+.+.+ +||+|+++
T Consensus 115 ~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~ 194 (305)
T 3ocj_A 115 HLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLTSN 194 (305)
T ss_dssp HCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEEECC
T ss_pred hCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEEEEC
Confidence 34678899999999999999985 2 56799999999999999999999888767799999999998754 89999997
Q ss_pred cCcc
Q 047897 103 IPYG 106 (232)
Q Consensus 103 ~p~~ 106 (232)
.+++
T Consensus 195 ~~~~ 198 (305)
T 3ocj_A 195 GLNI 198 (305)
T ss_dssp SSGG
T ss_pred Chhh
Confidence 6644
No 158
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.32 E-value=5.3e-12 Score=103.86 Aligned_cols=87 Identities=16% Similarity=0.174 Sum_probs=74.7
Q ss_pred HHHHhcCCCCCCEEEEEcCCccHhHHHHHh---cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCC----
Q 047897 21 SIVRKSSINPDDTVLEIGPGTGNLTLKLLE---VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEF---- 93 (232)
Q Consensus 21 ~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~---- 93 (232)
.....+++.++++|||+|||+|..|..+++ ...+|+|+|+++.+++.+++++...|+ .+++++++|+.+++.
T Consensus 93 l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~-~~v~~~~~D~~~~~~~~~~ 171 (309)
T 2b9e_A 93 LPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGV-SCCELAEEDFLAVSPSDPR 171 (309)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEECCGGGSCTTCGG
T ss_pred HHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC-CeEEEEeCChHhcCccccc
Confidence 344566778999999999999999999988 247999999999999999999999888 579999999988643
Q ss_pred -CCcceeecccCcccc
Q 047897 94 -PQFDLVVANIPYGIS 108 (232)
Q Consensus 94 -~~~D~Vi~n~p~~~~ 108 (232)
..||.|++|+|+...
T Consensus 172 ~~~fD~Vl~D~PcSg~ 187 (309)
T 2b9e_A 172 YHEVHYILLDPSCSGS 187 (309)
T ss_dssp GTTEEEEEECCCCCC-
T ss_pred cCCCCEEEEcCCcCCC
Confidence 369999999998654
No 159
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.32 E-value=7.4e-12 Score=99.04 Aligned_cols=88 Identities=23% Similarity=0.325 Sum_probs=72.0
Q ss_pred HHHHHHHHhcCC--CCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC
Q 047897 17 RVLDSIVRKSSI--NPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP 94 (232)
Q Consensus 17 ~~~~~i~~~~~~--~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~ 94 (232)
.+.+.+.+.+.. .++.+|||+|||+|.++..+++.+.+++|+|+++.+++.++++....+. +++++.+|+.+.+.+
T Consensus 22 ~~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~ 99 (246)
T 1y8c_A 22 KWSDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGL--KPRLACQDISNLNIN 99 (246)
T ss_dssp HHHHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTC--CCEEECCCGGGCCCS
T ss_pred HHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHHhhcCC--CeEEEecccccCCcc
Confidence 445555554432 2678999999999999999999888999999999999999999987653 699999999987664
Q ss_pred -Ccceeeccc-Ccc
Q 047897 95 -QFDLVVANI-PYG 106 (232)
Q Consensus 95 -~~D~Vi~n~-p~~ 106 (232)
+||+|+++. .++
T Consensus 100 ~~fD~v~~~~~~l~ 113 (246)
T 1y8c_A 100 RKFDLITCCLDSTN 113 (246)
T ss_dssp CCEEEEEECTTGGG
T ss_pred CCceEEEEcCcccc
Confidence 899999875 443
No 160
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.31 E-value=6.9e-12 Score=100.11 Aligned_cols=91 Identities=16% Similarity=0.188 Sum_probs=73.0
Q ss_pred CCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc---CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCC
Q 047897 14 TNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV---SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALK 90 (232)
Q Consensus 14 ~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~ 90 (232)
..+.....+...+...++.+|||||||+|..+..+++. +.+|+++|+++.+++.|++++...++.++++++.+|+.+
T Consensus 63 ~~~~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~ 142 (247)
T 1sui_A 63 TSADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALP 142 (247)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHH
Confidence 44554444444444446779999999999999999883 689999999999999999999988886789999999976
Q ss_pred C-C--------CCCcceeecccC
Q 047897 91 T-E--------FPQFDLVVANIP 104 (232)
Q Consensus 91 ~-~--------~~~~D~Vi~n~p 104 (232)
. + .++||+|+++.+
T Consensus 143 ~l~~l~~~~~~~~~fD~V~~d~~ 165 (247)
T 1sui_A 143 VLDEMIKDEKNHGSYDFIFVDAD 165 (247)
T ss_dssp HHHHHHHSGGGTTCBSEEEECSC
T ss_pred HHHHHHhccCCCCCEEEEEEcCc
Confidence 4 2 357999998754
No 161
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.31 E-value=4.1e-12 Score=100.52 Aligned_cols=83 Identities=16% Similarity=0.188 Sum_probs=68.6
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcC-CeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCC--C
Q 047897 16 QRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVS-KKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKT--E 92 (232)
Q Consensus 16 ~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~--~ 92 (232)
..+++.+...+ ..++.+|||||||+|.++..+++.+ .+|+|+|+|+.+++.|+++....+ .+++++++|+.+. +
T Consensus 47 ~~~~~~l~~~~-~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~ 123 (236)
T 1zx0_A 47 TPYMHALAAAA-SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPT 123 (236)
T ss_dssp HHHHHHHHHHH-TTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGG
T ss_pred HHHHHHHHhhc-CCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcC--CCeEEEecCHHHhhcc
Confidence 45556665554 4578899999999999999998743 499999999999999999988766 5799999999876 5
Q ss_pred C--CCcceeec
Q 047897 93 F--PQFDLVVA 101 (232)
Q Consensus 93 ~--~~~D~Vi~ 101 (232)
+ .+||+|++
T Consensus 124 ~~~~~fD~V~~ 134 (236)
T 1zx0_A 124 LPDGHFDGILY 134 (236)
T ss_dssp SCTTCEEEEEE
T ss_pred cCCCceEEEEE
Confidence 4 37999998
No 162
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.31 E-value=8.5e-12 Score=100.79 Aligned_cols=88 Identities=18% Similarity=0.327 Sum_probs=73.4
Q ss_pred HHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC-
Q 047897 18 VLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP- 94 (232)
Q Consensus 18 ~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~- 94 (232)
+.+.+.....+.++.+|||||||+|.++..+++. +.+|+|+|+++.+++.+++++...+. ++++++.+|+.+.+.+
T Consensus 25 l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~~~~~ 103 (276)
T 3mgg_A 25 LEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGI-KNVKFLQANIFSLPFED 103 (276)
T ss_dssp HHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEECCGGGCCSCT
T ss_pred HHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-CCcEEEEcccccCCCCC
Confidence 3334444455678899999999999999999984 78999999999999999999988877 4799999999987754
Q ss_pred -CcceeecccCcc
Q 047897 95 -QFDLVVANIPYG 106 (232)
Q Consensus 95 -~~D~Vi~n~p~~ 106 (232)
+||+|+++..++
T Consensus 104 ~~fD~v~~~~~l~ 116 (276)
T 3mgg_A 104 SSFDHIFVCFVLE 116 (276)
T ss_dssp TCEEEEEEESCGG
T ss_pred CCeeEEEEechhh
Confidence 799999876543
No 163
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.31 E-value=6.9e-13 Score=105.60 Aligned_cols=93 Identities=17% Similarity=0.153 Sum_probs=76.3
Q ss_pred ccCCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHh---cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCC
Q 047897 12 ILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLE---VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDA 88 (232)
Q Consensus 12 fl~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~ 88 (232)
+..++.....+...+...++.+|||||||+|..+..+++ .+.+|+++|+++.+++.|++++...++.++++++.+|+
T Consensus 42 ~~i~~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda 121 (242)
T 3r3h_A 42 MQVAPEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPA 121 (242)
T ss_dssp TSCCHHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCH
T ss_pred CccCHHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 335566555555555555678999999999999999998 36899999999999999999999988877899999999
Q ss_pred CCCC--------CCCcceeecccC
Q 047897 89 LKTE--------FPQFDLVVANIP 104 (232)
Q Consensus 89 ~~~~--------~~~~D~Vi~n~p 104 (232)
.+.. .++||+|+++.+
T Consensus 122 ~~~l~~~~~~~~~~~fD~V~~d~~ 145 (242)
T 3r3h_A 122 LDTLHSLLNEGGEHQFDFIFIDAD 145 (242)
T ss_dssp HHHHHHHHHHHCSSCEEEEEEESC
T ss_pred HHHHHHHhhccCCCCEeEEEEcCC
Confidence 7642 258999999865
No 164
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.31 E-value=1.2e-11 Score=95.85 Aligned_cols=91 Identities=20% Similarity=0.353 Sum_probs=71.6
Q ss_pred cccCCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCC-eEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCC
Q 047897 11 HILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSK-KVHAIEIDERMVEILNRRAADSGFHDRLNVISKDAL 89 (232)
Q Consensus 11 ~fl~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~ 89 (232)
.|..+...+..++... +.++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.++++.... ++++++.+|+.
T Consensus 24 ~~~~~~~~~~~~l~~~-~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~---~~i~~~~~d~~ 99 (215)
T 2pxx_A 24 DWFGDFSSFRALLEPE-LRPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAHV---PQLRWETMDVR 99 (215)
T ss_dssp CTTCCHHHHHHHHGGG-CCTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTTC---TTCEEEECCTT
T ss_pred ccccCHHHHHHHHHHh-cCCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcccC---CCcEEEEcchh
Confidence 3444454444444433 25778999999999999999998654 8999999999999999998642 57999999999
Q ss_pred CCCCC--CcceeecccCc
Q 047897 90 KTEFP--QFDLVVANIPY 105 (232)
Q Consensus 90 ~~~~~--~~D~Vi~n~p~ 105 (232)
+++.+ +||+|+++.++
T Consensus 100 ~~~~~~~~fD~v~~~~~~ 117 (215)
T 2pxx_A 100 KLDFPSASFDVVLEKGTL 117 (215)
T ss_dssp SCCSCSSCEEEEEEESHH
T ss_pred cCCCCCCcccEEEECcch
Confidence 87654 79999988664
No 165
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.30 E-value=6.7e-12 Score=106.53 Aligned_cols=92 Identities=20% Similarity=0.273 Sum_probs=73.3
Q ss_pred ccCCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCC
Q 047897 12 ILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKT 91 (232)
Q Consensus 12 fl~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~ 91 (232)
++.++...+.++... ..++.+|||+|||+|.++..++..+..|+|+|+|+.+++.+++|+..+++. ..+.++|+.+.
T Consensus 197 ~f~dqr~~r~~l~~~-~~~g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n~~~ng~~--~~~~~~D~~~~ 273 (393)
T 4dmg_A 197 YYLDQRENRRLFEAM-VRPGERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQAALRLGLR--VDIRHGEALPT 273 (393)
T ss_dssp SCGGGHHHHHHHHTT-CCTTCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCC--CEEEESCHHHH
T ss_pred cCCCHHHHHHHHHHH-hcCCCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHhCCC--CcEEEccHHHH
Confidence 334455555555543 235889999999999999999998778999999999999999999998875 35669999875
Q ss_pred C---CCCcceeecccCcc
Q 047897 92 E---FPQFDLVVANIPYG 106 (232)
Q Consensus 92 ~---~~~~D~Vi~n~p~~ 106 (232)
. .+.||+|++|+|+.
T Consensus 274 l~~~~~~fD~Ii~dpP~f 291 (393)
T 4dmg_A 274 LRGLEGPFHHVLLDPPTL 291 (393)
T ss_dssp HHTCCCCEEEEEECCCCC
T ss_pred HHHhcCCCCEEEECCCcC
Confidence 2 23599999999973
No 166
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.30 E-value=1e-11 Score=99.03 Aligned_cols=82 Identities=20% Similarity=0.270 Sum_probs=69.1
Q ss_pred HHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCC-eEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC--Cc
Q 047897 20 DSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSK-KVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP--QF 96 (232)
Q Consensus 20 ~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~--~~ 96 (232)
..+.+.+...++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.++++.. ..+++++.+|+.+++.+ +|
T Consensus 34 ~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~~~~~f 109 (253)
T 3g5l_A 34 HELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT----SPVVCYEQKAIEDIAIEPDAY 109 (253)
T ss_dssp HHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC----CTTEEEEECCGGGCCCCTTCE
T ss_pred HHHHHhhhccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc----cCCeEEEEcchhhCCCCCCCe
Confidence 3455566666788999999999999999999765 99999999999999999876 25799999999988763 89
Q ss_pred ceeecccCc
Q 047897 97 DLVVANIPY 105 (232)
Q Consensus 97 D~Vi~n~p~ 105 (232)
|+|+++..+
T Consensus 110 D~v~~~~~l 118 (253)
T 3g5l_A 110 NVVLSSLAL 118 (253)
T ss_dssp EEEEEESCG
T ss_pred EEEEEchhh
Confidence 999987543
No 167
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.30 E-value=3.2e-12 Score=108.41 Aligned_cols=92 Identities=20% Similarity=0.213 Sum_probs=75.5
Q ss_pred ccCCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCC
Q 047897 12 ILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKT 91 (232)
Q Consensus 12 fl~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~ 91 (232)
|+.++.....++..+ ++.+|||+|||+|.++..++..+.+|+|+|+++.+++.|++++..+++. +++++++|+.+.
T Consensus 194 ~f~~~~~~~~~~~~~---~~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n~~~n~~~-~~~~~~~d~~~~ 269 (382)
T 1wxx_A 194 AYLDQRENRLYMERF---RGERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARLNGLG-NVRVLEANAFDL 269 (382)
T ss_dssp CCGGGHHHHHHGGGC---CEEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHHHHTTCT-TEEEEESCHHHH
T ss_pred cccchHHHHHHHHhc---CCCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCC-CceEEECCHHHH
Confidence 444444444444444 6789999999999999999987789999999999999999999998874 599999999875
Q ss_pred C------CCCcceeecccCccc
Q 047897 92 E------FPQFDLVVANIPYGI 107 (232)
Q Consensus 92 ~------~~~~D~Vi~n~p~~~ 107 (232)
. ...||+|++|+|+..
T Consensus 270 ~~~~~~~~~~fD~Ii~dpP~~~ 291 (382)
T 1wxx_A 270 LRRLEKEGERFDLVVLDPPAFA 291 (382)
T ss_dssp HHHHHHTTCCEEEEEECCCCSC
T ss_pred HHHHHhcCCCeeEEEECCCCCC
Confidence 3 247999999999744
No 168
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.29 E-value=1.5e-11 Score=95.02 Aligned_cols=88 Identities=24% Similarity=0.254 Sum_probs=67.7
Q ss_pred CHHHHHHHHHhc-CCCCCCEEEEEcCCccHhHH-HHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC
Q 047897 15 NQRVLDSIVRKS-SINPDDTVLEIGPGTGNLTL-KLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE 92 (232)
Q Consensus 15 ~~~~~~~i~~~~-~~~~~~~vLDiG~G~G~~t~-~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~ 92 (232)
++.....+++.+ ...++.+|||+|||+|.++. .+...+.+|+|+|+|+.+++.+++++...+ .+++++.+|+.+.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~ 84 (209)
T 2p8j_A 7 RQPQLYRFLKYCNESNLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENN--FKLNISKGDIRKLP 84 (209)
T ss_dssp SCTHHHHHHHHHHHSSSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHT--CCCCEEECCTTSCC
T ss_pred hhhhHHHHHHHHhccCCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEECchhhCC
Confidence 344444444433 23467899999999999854 445577899999999999999999987765 46899999999887
Q ss_pred CC--CcceeecccC
Q 047897 93 FP--QFDLVVANIP 104 (232)
Q Consensus 93 ~~--~~D~Vi~n~p 104 (232)
.+ +||+|+++.+
T Consensus 85 ~~~~~fD~v~~~~~ 98 (209)
T 2p8j_A 85 FKDESMSFVYSYGT 98 (209)
T ss_dssp SCTTCEEEEEECSC
T ss_pred CCCCceeEEEEcCh
Confidence 54 7999998643
No 169
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.28 E-value=1.5e-11 Score=97.44 Aligned_cols=91 Identities=20% Similarity=0.189 Sum_probs=72.6
Q ss_pred CCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc---CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCC
Q 047897 14 TNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV---SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALK 90 (232)
Q Consensus 14 ~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~ 90 (232)
.++.....+...+...++.+|||||||+|..+..+++. +.+|+++|+++.+++.|++++...|+.++++++.+|+.+
T Consensus 54 ~~~~~~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~ 133 (237)
T 3c3y_A 54 TSPLAGQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAML 133 (237)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 34554444433344446779999999999999999983 689999999999999999999988886689999999976
Q ss_pred C-C--------CCCcceeecccC
Q 047897 91 T-E--------FPQFDLVVANIP 104 (232)
Q Consensus 91 ~-~--------~~~~D~Vi~n~p 104 (232)
. + .++||+|+++.+
T Consensus 134 ~l~~l~~~~~~~~~fD~I~~d~~ 156 (237)
T 3c3y_A 134 ALDNLLQGQESEGSYDFGFVDAD 156 (237)
T ss_dssp HHHHHHHSTTCTTCEEEEEECSC
T ss_pred HHHHHHhccCCCCCcCEEEECCc
Confidence 4 1 357999998754
No 170
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.28 E-value=2.2e-11 Score=93.76 Aligned_cols=83 Identities=13% Similarity=0.214 Sum_probs=69.5
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC--
Q 047897 17 RVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP-- 94 (232)
Q Consensus 17 ~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~-- 94 (232)
..+..++..+. ++ +|||+|||+|.++..+++.+.+|+|+|+++.+++.++++....+. ++.++.+|+.+.+.+
T Consensus 19 ~~l~~~~~~~~--~~-~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~ 93 (202)
T 2kw5_A 19 DFLVSVANQIP--QG-KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLAQEKGV--KITTVQSNLADFDIVAD 93 (202)
T ss_dssp SSHHHHHHHSC--SS-EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHTC--CEEEECCBTTTBSCCTT
T ss_pred HHHHHHHHhCC--CC-CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcChhhcCCCcC
Confidence 34555555553 55 999999999999999999888999999999999999999987764 699999999887653
Q ss_pred CcceeecccC
Q 047897 95 QFDLVVANIP 104 (232)
Q Consensus 95 ~~D~Vi~n~p 104 (232)
+||+|+++..
T Consensus 94 ~fD~v~~~~~ 103 (202)
T 2kw5_A 94 AWEGIVSIFC 103 (202)
T ss_dssp TCSEEEEECC
T ss_pred CccEEEEEhh
Confidence 7999998754
No 171
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.28 E-value=2.3e-11 Score=99.11 Aligned_cols=79 Identities=19% Similarity=0.301 Sum_probs=67.7
Q ss_pred CCCCCEEEEEcCCccHhHHHHHhcC-CeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCC---CCcceeeccc
Q 047897 28 INPDDTVLEIGPGTGNLTLKLLEVS-KKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEF---PQFDLVVANI 103 (232)
Q Consensus 28 ~~~~~~vLDiG~G~G~~t~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~---~~~D~Vi~n~ 103 (232)
+.++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.+++++...+...+++++.+|+.+.+. .+||+|+++.
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 141 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQF 141 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEES
T ss_pred CCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECc
Confidence 4578899999999999999988855 49999999999999999999887765689999999998765 3799999875
Q ss_pred Ccc
Q 047897 104 PYG 106 (232)
Q Consensus 104 p~~ 106 (232)
..+
T Consensus 142 ~l~ 144 (298)
T 1ri5_A 142 SFH 144 (298)
T ss_dssp CGG
T ss_pred hhh
Confidence 543
No 172
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.28 E-value=2.7e-11 Score=94.36 Aligned_cols=85 Identities=20% Similarity=0.296 Sum_probs=65.1
Q ss_pred HHHHHHHh--cCCCCCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCC--
Q 047897 18 VLDSIVRK--SSINPDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKT-- 91 (232)
Q Consensus 18 ~~~~i~~~--~~~~~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~-- 91 (232)
+...+... +.+.++.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.+.+..... .++.++.+|+.+.
T Consensus 43 l~~~~~~~l~~~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~---~~v~~~~~d~~~~~~ 119 (210)
T 1nt2_A 43 LAAMILKGHRLKLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER---NNIIPLLFDASKPWK 119 (210)
T ss_dssp HHHHHHTSCCCCCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC---SSEEEECSCTTCGGG
T ss_pred HHHHHHhhcccCCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC---CCeEEEEcCCCCchh
Confidence 33444443 45678899999999999999999884 379999999999887777766543 4689999998763
Q ss_pred --CC-CCcceeecccCc
Q 047897 92 --EF-PQFDLVVANIPY 105 (232)
Q Consensus 92 --~~-~~~D~Vi~n~p~ 105 (232)
+. ++||+|+++++.
T Consensus 120 ~~~~~~~fD~V~~~~~~ 136 (210)
T 1nt2_A 120 YSGIVEKVDLIYQDIAQ 136 (210)
T ss_dssp TTTTCCCEEEEEECCCS
T ss_pred hcccccceeEEEEeccC
Confidence 22 479999998643
No 173
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.28 E-value=1.1e-11 Score=96.18 Aligned_cols=75 Identities=24% Similarity=0.296 Sum_probs=64.5
Q ss_pred CCCCEEEEEcCCccHhHHHHHhc---CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCC-C--CCCcceeecc
Q 047897 29 NPDDTVLEIGPGTGNLTLKLLEV---SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKT-E--FPQFDLVVAN 102 (232)
Q Consensus 29 ~~~~~vLDiG~G~G~~t~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~-~--~~~~D~Vi~n 102 (232)
.++.+|||||||+|..+..+++. +.+|+++|+|+.+++.|++++...++.++++++++|+.+. + .+ ||+|+++
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~ 133 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMD 133 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEE
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEc
Confidence 35679999999999999999984 6899999999999999999998887766799999999764 2 23 9999987
Q ss_pred cC
Q 047897 103 IP 104 (232)
Q Consensus 103 ~p 104 (232)
.+
T Consensus 134 ~~ 135 (210)
T 3c3p_A 134 CD 135 (210)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 174
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.27 E-value=2.2e-11 Score=97.76 Aligned_cols=69 Identities=20% Similarity=0.267 Sum_probs=61.7
Q ss_pred CCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC-Ccceeeccc
Q 047897 29 NPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP-QFDLVVANI 103 (232)
Q Consensus 29 ~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~-~~D~Vi~n~ 103 (232)
.++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|++++ .+++++.+|+.+++.+ +||+|+++.
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~fD~v~~~~ 118 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARRRN------PDAVLHHGDMRDFSLGRRFSAVTCMF 118 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHHHC------TTSEEEECCTTTCCCSCCEEEEEECT
T ss_pred CCCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhC------CCCEEEECChHHCCccCCcCEEEEcC
Confidence 35689999999999999999998889999999999999999986 3689999999998754 899999875
No 175
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.27 E-value=1.9e-11 Score=96.62 Aligned_cols=81 Identities=17% Similarity=0.226 Sum_probs=68.5
Q ss_pred HHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCC-eEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC--Ccc
Q 047897 21 SIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSK-KVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP--QFD 97 (232)
Q Consensus 21 ~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~--~~D 97 (232)
.+.+.+...++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.++++... .+++++.+|+.+.+.+ +||
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~~~~~~fD 109 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD----TGITYERADLDKLHLPQDSFD 109 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS----SSEEEEECCGGGCCCCTTCEE
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc----CCceEEEcChhhccCCCCCce
Confidence 456666666788999999999999999998776 999999999999999988754 3699999999887653 799
Q ss_pred eeecccCc
Q 047897 98 LVVANIPY 105 (232)
Q Consensus 98 ~Vi~n~p~ 105 (232)
+|+++..+
T Consensus 110 ~v~~~~~l 117 (243)
T 3bkw_A 110 LAYSSLAL 117 (243)
T ss_dssp EEEEESCG
T ss_pred EEEEeccc
Confidence 99987553
No 176
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.27 E-value=1.2e-11 Score=93.75 Aligned_cols=81 Identities=15% Similarity=0.127 Sum_probs=63.5
Q ss_pred HHHHHHhcCCCCCCEEEEEcCCccHhHHHHHh--cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC-CCC
Q 047897 19 LDSIVRKSSINPDDTVLEIGPGTGNLTLKLLE--VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE-FPQ 95 (232)
Q Consensus 19 ~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~-~~~ 95 (232)
...+...+ .+.++|||+|||+|.++..++. +..+|+|+|+|+.|++.+++++...|...++++ +|..+.. .++
T Consensus 40 Y~~~~~~l--~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~~~~ 115 (200)
T 3fzg_A 40 YTYVFGNI--KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVYKGT 115 (200)
T ss_dssp HHHHHHHS--CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHTTSE
T ss_pred HHHHHhhc--CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCCCCC
Confidence 33444445 4577999999999999999977 367999999999999999999999887546766 5655433 347
Q ss_pred cceeeccc
Q 047897 96 FDLVVANI 103 (232)
Q Consensus 96 ~D~Vi~n~ 103 (232)
||+|++.-
T Consensus 116 ~DvVLa~k 123 (200)
T 3fzg_A 116 YDVVFLLK 123 (200)
T ss_dssp EEEEEEET
T ss_pred cChhhHhh
Confidence 99999864
No 177
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.27 E-value=2.4e-11 Score=95.38 Aligned_cols=78 Identities=24% Similarity=0.440 Sum_probs=67.5
Q ss_pred CCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCC----CccEEEEEcCCCCCCCC--Ccceeecc
Q 047897 29 NPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGF----HDRLNVISKDALKTEFP--QFDLVVAN 102 (232)
Q Consensus 29 ~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~~~~~~~D~~~~~~~--~~D~Vi~n 102 (232)
.++.+|||+|||+|.++..+++.+.+|+|+|+++.+++.++++....++ ..+++++.+|+.+.+.+ +||+|+++
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 108 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQ 108 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEEc
Confidence 4788999999999999999999888999999999999999999987665 23689999999988753 79999987
Q ss_pred cCcc
Q 047897 103 IPYG 106 (232)
Q Consensus 103 ~p~~ 106 (232)
..++
T Consensus 109 ~~l~ 112 (235)
T 3sm3_A 109 AFLT 112 (235)
T ss_dssp SCGG
T ss_pred chhh
Confidence 5543
No 178
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.27 E-value=2.4e-11 Score=94.36 Aligned_cols=81 Identities=23% Similarity=0.273 Sum_probs=66.4
Q ss_pred HHHHHHhcC-CCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC-CCCc
Q 047897 19 LDSIVRKSS-INPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE-FPQF 96 (232)
Q Consensus 19 ~~~i~~~~~-~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~-~~~~ 96 (232)
.+.+++.+. ..++.+|||+|||+|.++..+++.+.+|+|+|+++.+++.+++ .+. .+++++++|+.+.. .++|
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~----~~~-~~~~~~~~d~~~~~~~~~~ 108 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGR----HGL-DNVEFRQQDLFDWTPDRQW 108 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGG----GCC-TTEEEEECCTTSCCCSSCE
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHh----cCC-CCeEEEecccccCCCCCce
Confidence 344555544 5677899999999999999999988899999999999999988 333 57999999998873 2489
Q ss_pred ceeecccC
Q 047897 97 DLVVANIP 104 (232)
Q Consensus 97 D~Vi~n~p 104 (232)
|+|+++..
T Consensus 109 D~v~~~~~ 116 (218)
T 3ou2_A 109 DAVFFAHW 116 (218)
T ss_dssp EEEEEESC
T ss_pred eEEEEech
Confidence 99998654
No 179
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.27 E-value=1.7e-11 Score=96.24 Aligned_cols=86 Identities=22% Similarity=0.404 Sum_probs=70.1
Q ss_pred HHHHHHHHH---hcCCCCCCEEEEEcCCccHhHHHHHhc---CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCC
Q 047897 16 QRVLDSIVR---KSSINPDDTVLEIGPGTGNLTLKLLEV---SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDAL 89 (232)
Q Consensus 16 ~~~~~~i~~---~~~~~~~~~vLDiG~G~G~~t~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~ 89 (232)
+.+...++. .+.+.++.+|||+|||+|.++..+++. ..+|+|+|+++.+++.+++++... ++++++.+|+.
T Consensus 56 ~~~~~~i~~~l~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~---~~v~~~~~d~~ 132 (227)
T 1g8a_A 56 SKLGAAIMNGLKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER---RNIVPILGDAT 132 (227)
T ss_dssp CHHHHHHHTTCCCCCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC---TTEEEEECCTT
T ss_pred hhHHHHHHhhHHhcCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc---CCCEEEEccCC
Confidence 445566643 334678899999999999999999974 379999999999999999998764 57999999998
Q ss_pred CCC----C-CCcceeecccC
Q 047897 90 KTE----F-PQFDLVVANIP 104 (232)
Q Consensus 90 ~~~----~-~~~D~Vi~n~p 104 (232)
+.. . ++||+|++++|
T Consensus 133 ~~~~~~~~~~~~D~v~~~~~ 152 (227)
T 1g8a_A 133 KPEEYRALVPKVDVIFEDVA 152 (227)
T ss_dssp CGGGGTTTCCCEEEEEECCC
T ss_pred CcchhhcccCCceEEEECCC
Confidence 732 2 37999999987
No 180
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.27 E-value=2e-11 Score=97.22 Aligned_cols=85 Identities=20% Similarity=0.241 Sum_probs=71.4
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc-CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC-
Q 047897 17 RVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV-SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP- 94 (232)
Q Consensus 17 ~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~- 94 (232)
..+..+++.+...++.+|||||||+|.++..+++. ..+|+|+|+++.+++.+++++... .+++++.+|+.+++.+
T Consensus 80 ~~~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~~ 156 (254)
T 1xtp_A 80 EGSRNFIASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM---PVGKFILASMETATLPP 156 (254)
T ss_dssp HHHHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS---SEEEEEESCGGGCCCCS
T ss_pred HHHHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC---CceEEEEccHHHCCCCC
Confidence 34466777777778899999999999999999885 567999999999999999998654 4799999999887654
Q ss_pred -CcceeecccC
Q 047897 95 -QFDLVVANIP 104 (232)
Q Consensus 95 -~~D~Vi~n~p 104 (232)
+||+|+++..
T Consensus 157 ~~fD~v~~~~~ 167 (254)
T 1xtp_A 157 NTYDLIVIQWT 167 (254)
T ss_dssp SCEEEEEEESC
T ss_pred CCeEEEEEcch
Confidence 7999998654
No 181
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.27 E-value=5.9e-12 Score=102.92 Aligned_cols=87 Identities=17% Similarity=0.269 Sum_probs=65.5
Q ss_pred HHHHHHhcCCC--CCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhhcCC-----------------
Q 047897 19 LDSIVRKSSIN--PDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAADSGF----------------- 77 (232)
Q Consensus 19 ~~~i~~~~~~~--~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~----------------- 77 (232)
.+.+++.+... ++.+|||||||+|.++..++.. +.+|+|+|+|+.+++.|++++...+.
T Consensus 33 ~~~~l~~l~~~~~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (292)
T 3g07_A 33 EDGRLRVLKPEWFRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAE 112 (292)
T ss_dssp -CGGGGTSCGGGTTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC----------------------
T ss_pred hhHHHHhhhhhhcCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccc
Confidence 33344444332 6789999999999999999984 68999999999999999998765432
Q ss_pred ----------------------------------------CccEEEEEcCCCCCC-------CCCcceeecccCc
Q 047897 78 ----------------------------------------HDRLNVISKDALKTE-------FPQFDLVVANIPY 105 (232)
Q Consensus 78 ----------------------------------------~~~~~~~~~D~~~~~-------~~~~D~Vi~n~p~ 105 (232)
+.+++++++|+...+ .++||+|+++-..
T Consensus 113 ~~~~~~~~~~~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl 187 (292)
T 3g07_A 113 GEEGTTTVRKRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLT 187 (292)
T ss_dssp -----------------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCH
T ss_pred cccccccccccccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHH
Confidence 148999999998654 3489999986543
No 182
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.26 E-value=8.7e-12 Score=108.40 Aligned_cols=87 Identities=15% Similarity=0.197 Sum_probs=74.3
Q ss_pred HHHHhcCCC--CCCEEEEEcCCccHhHHHHHhc---CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCC--
Q 047897 21 SIVRKSSIN--PDDTVLEIGPGTGNLTLKLLEV---SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEF-- 93 (232)
Q Consensus 21 ~i~~~~~~~--~~~~vLDiG~G~G~~t~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~-- 93 (232)
.+...+++. ++++|||+|||+|..|..+++. ..+|+|+|+|+.+++.+++++...|+ .++.++++|+.+++.
T Consensus 106 l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~-~nv~~~~~D~~~~~~~~ 184 (479)
T 2frx_A 106 LPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGI-SNVALTHFDGRVFGAAV 184 (479)
T ss_dssp HHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTC-CSEEEECCCSTTHHHHS
T ss_pred HHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCCHHHhhhhc
Confidence 344556666 8999999999999999999983 47999999999999999999999887 479999999988642
Q ss_pred -CCcceeecccCcccc
Q 047897 94 -PQFDLVVANIPYGIS 108 (232)
Q Consensus 94 -~~~D~Vi~n~p~~~~ 108 (232)
..||.|++|+|+...
T Consensus 185 ~~~fD~Il~D~PcSg~ 200 (479)
T 2frx_A 185 PEMFDAILLDAPCSGE 200 (479)
T ss_dssp TTCEEEEEEECCCCCG
T ss_pred cccCCEEEECCCcCCc
Confidence 479999999998643
No 183
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.26 E-value=2.4e-11 Score=96.08 Aligned_cols=83 Identities=24% Similarity=0.327 Sum_probs=69.2
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC--
Q 047897 17 RVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP-- 94 (232)
Q Consensus 17 ~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~-- 94 (232)
.+++.+.+.+. ++.+|||||||+|.++..+++.+.+|+|+|+++.+++.++++... .+++++.+|+.+.+.+
T Consensus 42 ~~~~~l~~~~~--~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~~~~~ 115 (242)
T 3l8d_A 42 TIIPFFEQYVK--KEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKGKERGEG----PDLSFIKGDLSSLPFENE 115 (242)
T ss_dssp THHHHHHHHSC--TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHTTTCB----TTEEEEECBTTBCSSCTT
T ss_pred HHHHHHHHHcC--CCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhccc----CCceEEEcchhcCCCCCC
Confidence 45556655553 778999999999999999999888999999999999999988522 5799999999988753
Q ss_pred CcceeecccCc
Q 047897 95 QFDLVVANIPY 105 (232)
Q Consensus 95 ~~D~Vi~n~p~ 105 (232)
+||+|+++..+
T Consensus 116 ~fD~v~~~~~l 126 (242)
T 3l8d_A 116 QFEAIMAINSL 126 (242)
T ss_dssp CEEEEEEESCT
T ss_pred CccEEEEcChH
Confidence 89999986543
No 184
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=99.26 E-value=3.5e-12 Score=102.13 Aligned_cols=89 Identities=20% Similarity=0.367 Sum_probs=70.8
Q ss_pred HHHHHhcCCCCC--CEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhc-------C-CCccEEEEEcCCC
Q 047897 20 DSIVRKSSINPD--DTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADS-------G-FHDRLNVISKDAL 89 (232)
Q Consensus 20 ~~i~~~~~~~~~--~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~-------~-~~~~~~~~~~D~~ 89 (232)
+.+.+.+.+.++ .+|||+|||+|..+..++..+++|+++|+++.+++.+++++... + +..+++++++|+.
T Consensus 76 e~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~ 155 (258)
T 2oyr_A 76 EAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSL 155 (258)
T ss_dssp SHHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHH
T ss_pred HHHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHH
Confidence 345566666677 89999999999999999998889999999999888877776432 1 2247999999997
Q ss_pred CC-C-C-CCcceeecccCcccc
Q 047897 90 KT-E-F-PQFDLVVANIPYGIS 108 (232)
Q Consensus 90 ~~-~-~-~~~D~Vi~n~p~~~~ 108 (232)
++ + . ++||+|+.|+||...
T Consensus 156 ~~L~~~~~~fDvV~lDP~y~~~ 177 (258)
T 2oyr_A 156 TALTDITPRPQVVYLDPMFPHK 177 (258)
T ss_dssp HHSTTCSSCCSEEEECCCCCCC
T ss_pred HHHHhCcccCCEEEEcCCCCCc
Confidence 74 2 1 379999999999754
No 185
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.26 E-value=3.6e-11 Score=95.04 Aligned_cols=83 Identities=23% Similarity=0.414 Sum_probs=70.6
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC-
Q 047897 16 QRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP- 94 (232)
Q Consensus 16 ~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~- 94 (232)
..+.+.+.+.+. ++.+|||+|||+|.++..+++. .+|+|+|+++.+++.++++....+ .+++++.+|+.+.+.+
T Consensus 21 ~~~~~~~~~~~~--~~~~vLdiG~G~G~~~~~l~~~-~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~~~ 95 (243)
T 3d2l_A 21 PEWVAWVLEQVE--PGKRIADIGCGTGTATLLLADH-YEVTGVDLSEEMLEIAQEKAMETN--RHVDFWVQDMRELELPE 95 (243)
T ss_dssp HHHHHHHHHHSC--TTCEEEEESCTTCHHHHHHTTT-SEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCGGGCCCSS
T ss_pred HHHHHHHHHHcC--CCCeEEEecCCCCHHHHHHhhC-CeEEEEECCHHHHHHHHHhhhhcC--CceEEEEcChhhcCCCC
Confidence 456667777664 5689999999999999999988 899999999999999999998765 4699999999887654
Q ss_pred Ccceeeccc
Q 047897 95 QFDLVVANI 103 (232)
Q Consensus 95 ~~D~Vi~n~ 103 (232)
+||+|+++.
T Consensus 96 ~fD~v~~~~ 104 (243)
T 3d2l_A 96 PVDAITILC 104 (243)
T ss_dssp CEEEEEECT
T ss_pred CcCEEEEeC
Confidence 799999853
No 186
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.26 E-value=1.3e-11 Score=97.60 Aligned_cols=91 Identities=21% Similarity=0.246 Sum_probs=72.2
Q ss_pred CCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc---CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCC
Q 047897 14 TNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV---SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALK 90 (232)
Q Consensus 14 ~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~ 90 (232)
.++...+.+...+...++.+|||||||+|..+..+++. +.+|+++|+++.+++.|++++...++.++++++.+|+.+
T Consensus 56 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~ 135 (232)
T 3cbg_A 56 ISPEQAQFLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALA 135 (232)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 44555544444444446779999999999999999983 579999999999999999999888876689999999865
Q ss_pred C----CC----CCcceeecccC
Q 047897 91 T----EF----PQFDLVVANIP 104 (232)
Q Consensus 91 ~----~~----~~~D~Vi~n~p 104 (232)
. +. ++||+|+++.+
T Consensus 136 ~l~~l~~~~~~~~fD~V~~d~~ 157 (232)
T 3cbg_A 136 TLEQLTQGKPLPEFDLIFIDAD 157 (232)
T ss_dssp HHHHHHTSSSCCCEEEEEECSC
T ss_pred HHHHHHhcCCCCCcCEEEECCC
Confidence 2 11 57999998765
No 187
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.26 E-value=5.3e-11 Score=98.80 Aligned_cols=91 Identities=15% Similarity=0.263 Sum_probs=74.8
Q ss_pred HHHHHHHHhcCC--CCCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC
Q 047897 17 RVLDSIVRKSSI--NPDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE 92 (232)
Q Consensus 17 ~~~~~i~~~~~~--~~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~ 92 (232)
..+..+++.++. .++.+|||+|||+|.++..+++. +.+++++|++ .+++.+++++...++.++++++.+|+.+.+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 228 (335)
T 2r3s_A 150 NPAQLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVD 228 (335)
T ss_dssp HHHHHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSC
T ss_pred hhHHHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCC
Confidence 344566677776 77889999999999999999984 6799999999 999999999988877668999999998866
Q ss_pred CC-Ccceeecc-cCcccc
Q 047897 93 FP-QFDLVVAN-IPYGIS 108 (232)
Q Consensus 93 ~~-~~D~Vi~n-~p~~~~ 108 (232)
.+ .||+|+++ +.+++.
T Consensus 229 ~~~~~D~v~~~~~l~~~~ 246 (335)
T 2r3s_A 229 YGNDYDLVLLPNFLHHFD 246 (335)
T ss_dssp CCSCEEEEEEESCGGGSC
T ss_pred CCCCCcEEEEcchhccCC
Confidence 55 59999984 444443
No 188
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.26 E-value=2.7e-11 Score=95.19 Aligned_cols=79 Identities=18% Similarity=0.262 Sum_probs=65.2
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCC-CCCC--
Q 047897 17 RVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDAL-KTEF-- 93 (232)
Q Consensus 17 ~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~-~~~~-- 93 (232)
.+++.++.... .++.+|||+|||+|.++..+++.+.+|+|+|+++.+++.++++. ++++++++|+. .++.
T Consensus 36 ~l~~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~ 108 (226)
T 3m33_A 36 LTFDLWLSRLL-TPQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARANA------PHADVYEWNGKGELPAGL 108 (226)
T ss_dssp HHHHHHHHHHC-CTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHC------TTSEEEECCSCSSCCTTC
T ss_pred HHHHHHHHhcC-CCCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhC------CCceEEEcchhhccCCcC
Confidence 45555554332 57789999999999999999998899999999999999999982 57999999994 4553
Q ss_pred -CCcceeecc
Q 047897 94 -PQFDLVVAN 102 (232)
Q Consensus 94 -~~~D~Vi~n 102 (232)
.+||+|+++
T Consensus 109 ~~~fD~v~~~ 118 (226)
T 3m33_A 109 GAPFGLIVSR 118 (226)
T ss_dssp CCCEEEEEEE
T ss_pred CCCEEEEEeC
Confidence 379999987
No 189
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.25 E-value=2.7e-11 Score=95.90 Aligned_cols=76 Identities=20% Similarity=0.337 Sum_probs=62.5
Q ss_pred CCCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhh------cCCCccEEEEEcCCCC-CC----CCC
Q 047897 29 NPDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAAD------SGFHDRLNVISKDALK-TE----FPQ 95 (232)
Q Consensus 29 ~~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~------~~~~~~~~~~~~D~~~-~~----~~~ 95 (232)
.++.+|||||||+|.++..+++. ...|+|+|+++.+++.|++++.. .+. .|+.++++|+.+ ++ ..+
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~-~nv~~~~~d~~~~l~~~~~~~~ 123 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGF-QNIACLRSNAMKHLPNFFYKGQ 123 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCC-TTEEEEECCTTTCHHHHCCTTC
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCC-CeEEEEECcHHHhhhhhCCCcC
Confidence 45678999999999999999883 57999999999999999988753 344 589999999987 33 348
Q ss_pred cceeecccCc
Q 047897 96 FDLVVANIPY 105 (232)
Q Consensus 96 ~D~Vi~n~p~ 105 (232)
+|.|+++.|-
T Consensus 124 ~D~v~~~~~d 133 (235)
T 3ckk_A 124 LTKMFFLFPD 133 (235)
T ss_dssp EEEEEEESCC
T ss_pred eeEEEEeCCC
Confidence 9999887653
No 190
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.25 E-value=2.1e-11 Score=110.61 Aligned_cols=96 Identities=18% Similarity=0.242 Sum_probs=76.0
Q ss_pred ccCCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcC-CeEEEEEcCHHHHHHHHHHHhhcCCC-ccEEEEEcCCC
Q 047897 12 ILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVS-KKVHAIEIDERMVEILNRRAADSGFH-DRLNVISKDAL 89 (232)
Q Consensus 12 fl~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~-~~~~~~~~D~~ 89 (232)
++.|....+.++... .++.+|||+|||+|.++..++..+ .+|+++|+|+.+++.+++|+..+++. ++++++++|+.
T Consensus 523 ~f~d~r~~r~~l~~~--~~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~ 600 (703)
T 3v97_A 523 LFLDHRIARRMLGQM--SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCL 600 (703)
T ss_dssp CCGGGHHHHHHHHHH--CTTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHH
T ss_pred CcccHHHHHHHHHHh--cCCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHH
Confidence 333445555555443 268899999999999999999855 46999999999999999999999885 58999999998
Q ss_pred CC---CCCCcceeecccCcccch
Q 047897 90 KT---EFPQFDLVVANIPYGISS 109 (232)
Q Consensus 90 ~~---~~~~~D~Vi~n~p~~~~~ 109 (232)
++ ...+||+|++|+|+...+
T Consensus 601 ~~l~~~~~~fD~Ii~DPP~f~~~ 623 (703)
T 3v97_A 601 AWLREANEQFDLIFIDPPTFSNS 623 (703)
T ss_dssp HHHHHCCCCEEEEEECCCSBC--
T ss_pred HHHHhcCCCccEEEECCccccCC
Confidence 74 224799999999975543
No 191
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.25 E-value=1.4e-11 Score=94.87 Aligned_cols=79 Identities=16% Similarity=0.281 Sum_probs=65.4
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCC--
Q 047897 16 QRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEF-- 93 (232)
Q Consensus 16 ~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~-- 93 (232)
..++..+.... +.+|||+|||+|.++..+++.+.+|+|+|+++.+++.++++. ++++++.+|+.+++.
T Consensus 31 ~~~l~~~~~~~----~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~ 100 (203)
T 3h2b_A 31 RVLIEPWATGV----DGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELARQTH------PSVTFHHGTITDLSDSP 100 (203)
T ss_dssp HHHHHHHHHHC----CSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHHHHC------TTSEEECCCGGGGGGSC
T ss_pred HHHHHHHhccC----CCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC------CCCeEEeCcccccccCC
Confidence 34455544432 678999999999999999998889999999999999999884 469999999998765
Q ss_pred CCcceeecccC
Q 047897 94 PQFDLVVANIP 104 (232)
Q Consensus 94 ~~~D~Vi~n~p 104 (232)
.+||+|+++..
T Consensus 101 ~~fD~v~~~~~ 111 (203)
T 3h2b_A 101 KRWAGLLAWYS 111 (203)
T ss_dssp CCEEEEEEESS
T ss_pred CCeEEEEehhh
Confidence 37999998654
No 192
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.24 E-value=1.8e-11 Score=96.81 Aligned_cols=80 Identities=20% Similarity=0.280 Sum_probs=65.2
Q ss_pred HHHHHhcC-CCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCC-CCcc
Q 047897 20 DSIVRKSS-INPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEF-PQFD 97 (232)
Q Consensus 20 ~~i~~~~~-~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~-~~~D 97 (232)
+.+++.+. ..++.+|||||||+|.++..+++.+.+|+|+|+++.+++.++++... +++++++|+.+... .+||
T Consensus 31 ~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~-----~v~~~~~d~~~~~~~~~fD 105 (250)
T 2p7i_A 31 PFMVRAFTPFFRPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRLKD-----GITYIHSRFEDAQLPRRYD 105 (250)
T ss_dssp HHHHHHHGGGCCSSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHHSCS-----CEEEEESCGGGCCCSSCEE
T ss_pred HHHHHHHHhhcCCCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhhhC-----CeEEEEccHHHcCcCCccc
Confidence 44444443 34677899999999999999999888999999999999999998742 69999999988743 3799
Q ss_pred eeecccC
Q 047897 98 LVVANIP 104 (232)
Q Consensus 98 ~Vi~n~p 104 (232)
+|+++-.
T Consensus 106 ~v~~~~~ 112 (250)
T 2p7i_A 106 NIVLTHV 112 (250)
T ss_dssp EEEEESC
T ss_pred EEEEhhH
Confidence 9998643
No 193
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.24 E-value=1.1e-10 Score=98.05 Aligned_cols=88 Identities=18% Similarity=0.404 Sum_probs=76.2
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC
Q 047897 17 RVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP 94 (232)
Q Consensus 17 ~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~ 94 (232)
...+.+++.++..++.+|||||||+|.++..+++. ..+++++|+ +.+++.+++++...++.++++++.+|+.+.+.+
T Consensus 177 ~~~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 255 (359)
T 1x19_A 177 FAIQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYP 255 (359)
T ss_dssp HHHHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCC
T ss_pred hhHHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCC
Confidence 45667778888888899999999999999999983 679999999 999999999998887766799999999988777
Q ss_pred CcceeecccCc
Q 047897 95 QFDLVVANIPY 105 (232)
Q Consensus 95 ~~D~Vi~n~p~ 105 (232)
..|+|+++..+
T Consensus 256 ~~D~v~~~~vl 266 (359)
T 1x19_A 256 EADAVLFCRIL 266 (359)
T ss_dssp CCSEEEEESCG
T ss_pred CCCEEEEechh
Confidence 67999886554
No 194
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.24 E-value=3.4e-11 Score=95.90 Aligned_cols=77 Identities=23% Similarity=0.354 Sum_probs=63.5
Q ss_pred CCCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhhc--------CCCccEEEEEcCCCC-CC----C
Q 047897 29 NPDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAADS--------GFHDRLNVISKDALK-TE----F 93 (232)
Q Consensus 29 ~~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~--------~~~~~~~~~~~D~~~-~~----~ 93 (232)
.++.+|||||||+|.++..++.. ..+|+|+|+++.+++.+++++... ++ ++++++.+|+.+ ++ .
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~-~nv~~~~~D~~~~l~~~~~~ 126 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGF-QNINVLRGNAMKFLPNFFEK 126 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTT-TTEEEEECCTTSCGGGTSCT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCC-CcEEEEeccHHHHHHHhccc
Confidence 36779999999999999999984 468999999999999999998765 66 589999999987 33 3
Q ss_pred CCcceeecccCcc
Q 047897 94 PQFDLVVANIPYG 106 (232)
Q Consensus 94 ~~~D~Vi~n~p~~ 106 (232)
..+|.|+.+.|..
T Consensus 127 ~~~d~v~~~~p~p 139 (246)
T 2vdv_E 127 GQLSKMFFCFPDP 139 (246)
T ss_dssp TCEEEEEEESCCC
T ss_pred cccCEEEEECCCc
Confidence 3788888765543
No 195
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.24 E-value=3.4e-11 Score=104.14 Aligned_cols=91 Identities=22% Similarity=0.259 Sum_probs=77.1
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHh--cC-CeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC-
Q 047897 17 RVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLE--VS-KKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE- 92 (232)
Q Consensus 17 ~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~--~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~- 92 (232)
.....+...+++.++++|||+|||+|..|..+++ .+ .+|+|+|+++.+++.+++++...|+ .+++++++|+.+.+
T Consensus 246 ~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~-~~v~~~~~D~~~~~~ 324 (450)
T 2yxl_A 246 EASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGI-KIVKPLVKDARKAPE 324 (450)
T ss_dssp HHHHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCTTCCSS
T ss_pred chhHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC-CcEEEEEcChhhcch
Confidence 3444455667788899999999999999999998 33 7999999999999999999998887 47999999998875
Q ss_pred -C--CCcceeecccCcccc
Q 047897 93 -F--PQFDLVVANIPYGIS 108 (232)
Q Consensus 93 -~--~~~D~Vi~n~p~~~~ 108 (232)
+ ..||.|++|+|+...
T Consensus 325 ~~~~~~fD~Vl~D~Pcsg~ 343 (450)
T 2yxl_A 325 IIGEEVADKVLLDAPCTSS 343 (450)
T ss_dssp SSCSSCEEEEEEECCCCCG
T ss_pred hhccCCCCEEEEcCCCCCC
Confidence 3 369999999998654
No 196
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=99.24 E-value=2.4e-11 Score=109.71 Aligned_cols=102 Identities=19% Similarity=0.245 Sum_probs=78.1
Q ss_pred ccCCCcccccCCHHHHHHHHHh----cC--CCCCCEEEEEcCCccHhHHHHHhcC-----CeEEEEEcCHHHHHHH--HH
Q 047897 4 FHKSKGQHILTNQRVLDSIVRK----SS--INPDDTVLEIGPGTGNLTLKLLEVS-----KKVHAIEIDERMVEIL--NR 70 (232)
Q Consensus 4 ~~k~~gq~fl~~~~~~~~i~~~----~~--~~~~~~vLDiG~G~G~~t~~l~~~~-----~~v~~vD~~~~~~~~a--~~ 70 (232)
.++..|| |.+++.+++.|++. ++ ..++.+|||+|||+|.++..+++.. .+++|+|+|+.+++.| +.
T Consensus 290 ~Rkk~Gq-FYTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~Rl 368 (878)
T 3s1s_A 290 GRGHEGV-VPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRL 368 (878)
T ss_dssp SCCCCBS-SSCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHH
T ss_pred hCCcCce-EcCCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHH
Confidence 4567787 78889999999887 22 2357899999999999999988732 4799999999999999 66
Q ss_pred HHhh----cCCCccEEEEEcCCCCCC---CCCcceeecccCccc
Q 047897 71 RAAD----SGFHDRLNVISKDALKTE---FPQFDLVVANIPYGI 107 (232)
Q Consensus 71 ~~~~----~~~~~~~~~~~~D~~~~~---~~~~D~Vi~n~p~~~ 107 (232)
++.. .+. ....+..+|+.+.. ...||+|++||||..
T Consensus 369 NL~lN~LlhGi-~~~~I~~dD~L~~~~~~~~kFDVVIgNPPYg~ 411 (878)
T 3s1s_A 369 GLLFPQLVSSN-NAPTITGEDVCSLNPEDFANVSVVVMNPPYVS 411 (878)
T ss_dssp HTTSTTTCBTT-BCCEEECCCGGGCCGGGGTTEEEEEECCBCCS
T ss_pred HHHHhhhhcCC-CcceEEecchhcccccccCCCCEEEECCCccc
Confidence 6544 233 23456677777643 347999999999954
No 197
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.24 E-value=3.4e-11 Score=108.98 Aligned_cols=89 Identities=11% Similarity=0.174 Sum_probs=73.3
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcC---CeEEEEEcCHHHHHHHHHHHhhc------CCCccEEEEEcC
Q 047897 17 RVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVS---KKVHAIEIDERMVEILNRRAADS------GFHDRLNVISKD 87 (232)
Q Consensus 17 ~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~------~~~~~~~~~~~D 87 (232)
..++.+++.+...++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|++++... +. .+++++++|
T Consensus 708 qRle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl-~nVefiqGD 786 (950)
T 3htx_A 708 QRVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNV-KSATLYDGS 786 (950)
T ss_dssp HHHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSC-SEEEEEESC
T ss_pred HHHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCC-CceEEEECc
Confidence 345566666666688899999999999999999965 79999999999999999976532 44 489999999
Q ss_pred CCCCCCC--CcceeecccCcc
Q 047897 88 ALKTEFP--QFDLVVANIPYG 106 (232)
Q Consensus 88 ~~~~~~~--~~D~Vi~n~p~~ 106 (232)
+.+++.+ .||+|+++-.++
T Consensus 787 a~dLp~~d~sFDlVV~~eVLe 807 (950)
T 3htx_A 787 ILEFDSRLHDVDIGTCLEVIE 807 (950)
T ss_dssp TTSCCTTSCSCCEEEEESCGG
T ss_pred hHhCCcccCCeeEEEEeCchh
Confidence 9998764 899999875544
No 198
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.23 E-value=2.6e-11 Score=99.85 Aligned_cols=93 Identities=24% Similarity=0.276 Sum_probs=71.8
Q ss_pred HHHHHHHHHhcCC--CCCCEEEEEcCCccHhHHHHHh-cCCeEEEEEcCHHHHHHHHHHHhhcC------CCccEEEEEc
Q 047897 16 QRVLDSIVRKSSI--NPDDTVLEIGPGTGNLTLKLLE-VSKKVHAIEIDERMVEILNRRAADSG------FHDRLNVISK 86 (232)
Q Consensus 16 ~~~~~~i~~~~~~--~~~~~vLDiG~G~G~~t~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~------~~~~~~~~~~ 86 (232)
..+++.+++.+.. .++.+|||+|||+|.++..+++ ...+++|+|+++.+++.++++....+ ...+++++++
T Consensus 18 ~~l~~~~~~~l~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~ 97 (313)
T 3bgv_A 18 SVLIGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITA 97 (313)
T ss_dssp HHHHHHHHHHHHHTC--CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEEC
T ss_pred HHHHHHHHHHhhhccCCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEe
Confidence 3555666655432 3678999999999999999987 46799999999999999999986541 1147999999
Q ss_pred CCCCCC----C----CCcceeecccCcccc
Q 047897 87 DALKTE----F----PQFDLVVANIPYGIS 108 (232)
Q Consensus 87 D~~~~~----~----~~~D~Vi~n~p~~~~ 108 (232)
|+.+.+ + .+||+|+++...++.
T Consensus 98 D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~ 127 (313)
T 3bgv_A 98 DSSKELLIDKFRDPQMCFDICSCQFVCHYS 127 (313)
T ss_dssp CTTTSCSTTTCSSTTCCEEEEEEETCGGGG
T ss_pred cccccchhhhcccCCCCEEEEEEecchhhc
Confidence 998875 2 279999998877654
No 199
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.23 E-value=5e-11 Score=90.75 Aligned_cols=75 Identities=16% Similarity=0.268 Sum_probs=63.8
Q ss_pred HHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC--Cccee
Q 047897 22 IVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP--QFDLV 99 (232)
Q Consensus 22 i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~--~~D~V 99 (232)
+++.+ +.++.+|||+|||+|.++..+++.+.+++|+|+++.+++.++++. .+++++.+|+.+.+.+ +||+|
T Consensus 39 ~l~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~~D~i 111 (195)
T 3cgg_A 39 LIDAM-APRGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQDF------PEARWVVGDLSVDQISETDFDLI 111 (195)
T ss_dssp HHHHH-SCTTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHC------TTSEEEECCTTTSCCCCCCEEEE
T ss_pred HHHHh-ccCCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHHhC------CCCcEEEcccccCCCCCCceeEE
Confidence 44443 457889999999999999999998889999999999999999886 3588999999987653 79999
Q ss_pred eccc
Q 047897 100 VANI 103 (232)
Q Consensus 100 i~n~ 103 (232)
+++.
T Consensus 112 ~~~~ 115 (195)
T 3cgg_A 112 VSAG 115 (195)
T ss_dssp EECC
T ss_pred EECC
Confidence 9873
No 200
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.23 E-value=6.6e-12 Score=108.21 Aligned_cols=89 Identities=17% Similarity=0.184 Sum_probs=75.7
Q ss_pred HHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc---CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC---
Q 047897 19 LDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV---SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE--- 92 (232)
Q Consensus 19 ~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~--- 92 (232)
...+...+++.++++|||+|||+|..|..+++. ..+|+|+|+|+.+++.+++++...|+ .++.++++|+.++.
T Consensus 94 s~l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~-~nv~v~~~Da~~l~~~~ 172 (456)
T 3m4x_A 94 AMIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGV-SNAIVTNHAPAELVPHF 172 (456)
T ss_dssp THHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTC-SSEEEECCCHHHHHHHH
T ss_pred HHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCC-CceEEEeCCHHHhhhhc
Confidence 344455667788999999999999999999872 47999999999999999999999998 47999999998764
Q ss_pred CCCcceeecccCcccc
Q 047897 93 FPQFDLVVANIPYGIS 108 (232)
Q Consensus 93 ~~~~D~Vi~n~p~~~~ 108 (232)
...||.|++|+|+...
T Consensus 173 ~~~FD~Il~DaPCSg~ 188 (456)
T 3m4x_A 173 SGFFDRIVVDAPCSGE 188 (456)
T ss_dssp TTCEEEEEEECCCCCG
T ss_pred cccCCEEEECCCCCCc
Confidence 2479999999997543
No 201
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.23 E-value=5.6e-11 Score=96.59 Aligned_cols=92 Identities=15% Similarity=0.237 Sum_probs=66.7
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCC-eEEEEEc-CHHHHHHHHHHH-----hhcCCC----ccEEEEE
Q 047897 17 RVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSK-KVHAIEI-DERMVEILNRRA-----ADSGFH----DRLNVIS 85 (232)
Q Consensus 17 ~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~-~v~~vD~-~~~~~~~a~~~~-----~~~~~~----~~~~~~~ 85 (232)
.+++.+.+.....++.+|||+|||+|.++..++..+. +|+|+|+ |+.+++.+++++ ...++. ++++++.
T Consensus 66 ~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~ 145 (281)
T 3bzb_A 66 ALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVP 145 (281)
T ss_dssp HHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEE
T ss_pred HHHHHHHhcchhcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEE
Confidence 3555555555445788999999999999999988655 9999999 899999999999 544442 3688886
Q ss_pred cCCCCC--------CCCCcceeec-ccCcccc
Q 047897 86 KDALKT--------EFPQFDLVVA-NIPYGIS 108 (232)
Q Consensus 86 ~D~~~~--------~~~~~D~Vi~-n~p~~~~ 108 (232)
.|..+. +..+||+|++ +++|+..
T Consensus 146 ~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~ 177 (281)
T 3bzb_A 146 YRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQ 177 (281)
T ss_dssp CCTTSCTHHHHHHHSCSSBSEEEEESCCSCGG
T ss_pred ecCCCccHHHHhhccCCCCCEEEEeCcccChH
Confidence 665442 2357999887 7777643
No 202
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.23 E-value=7.7e-12 Score=107.96 Aligned_cols=89 Identities=19% Similarity=0.159 Sum_probs=75.3
Q ss_pred HHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc---CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC--
Q 047897 18 VLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV---SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE-- 92 (232)
Q Consensus 18 ~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~-- 92 (232)
....+...+++.++.+|||+|||+|..|..+++. ..+|+|+|+|+.+++.+++++...|+. +.++++|+.+++
T Consensus 89 ss~l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~--v~~~~~Da~~l~~~ 166 (464)
T 3m6w_A 89 SAQAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP--LAVTQAPPRALAEA 166 (464)
T ss_dssp TTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC--CEEECSCHHHHHHH
T ss_pred HHHHHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe--EEEEECCHHHhhhh
Confidence 3344556677788999999999999999999972 369999999999999999999999984 999999998765
Q ss_pred -CCCcceeecccCcccc
Q 047897 93 -FPQFDLVVANIPYGIS 108 (232)
Q Consensus 93 -~~~~D~Vi~n~p~~~~ 108 (232)
...||.|++|+|+...
T Consensus 167 ~~~~FD~Il~D~PcSg~ 183 (464)
T 3m6w_A 167 FGTYFHRVLLDAPCSGE 183 (464)
T ss_dssp HCSCEEEEEEECCCCCG
T ss_pred ccccCCEEEECCCcCCc
Confidence 2479999999998543
No 203
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.22 E-value=6.1e-12 Score=94.25 Aligned_cols=78 Identities=15% Similarity=0.214 Sum_probs=64.5
Q ss_pred HHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCCCcceeec
Q 047897 22 IVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVA 101 (232)
Q Consensus 22 i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vi~ 101 (232)
+++.+++.++.+|||+|||+|.++..+++...+++|+|+++.+++.++++. ++++++.+| ...+..+||+|++
T Consensus 9 ~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~------~~v~~~~~d-~~~~~~~~D~v~~ 81 (170)
T 3i9f_A 9 YLPNIFEGKKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEKF------DSVITLSDP-KEIPDNSVDFILF 81 (170)
T ss_dssp THHHHHSSCCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHHHC------TTSEEESSG-GGSCTTCEEEEEE
T ss_pred HHHhcCcCCCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHHHHhC------CCcEEEeCC-CCCCCCceEEEEE
Confidence 344455668889999999999999999986669999999999999999982 579999999 5555568999998
Q ss_pred ccCcc
Q 047897 102 NIPYG 106 (232)
Q Consensus 102 n~p~~ 106 (232)
+..++
T Consensus 82 ~~~l~ 86 (170)
T 3i9f_A 82 ANSFH 86 (170)
T ss_dssp ESCST
T ss_pred ccchh
Confidence 75543
No 204
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.22 E-value=1.5e-11 Score=97.44 Aligned_cols=84 Identities=17% Similarity=0.172 Sum_probs=67.1
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc-CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCC----
Q 047897 17 RVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV-SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKT---- 91 (232)
Q Consensus 17 ~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~---- 91 (232)
.+.+.+.+.+. .+|.+|||||||+|..+..+++. +.+|++||+|+.+++.|+++....+ .++.++.+|+.+.
T Consensus 48 ~~m~~~a~~~~-~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~--~~~~~~~~~a~~~~~~~ 124 (236)
T 3orh_A 48 PYMHALAAAAS-SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTL 124 (236)
T ss_dssp HHHHHHHHHHT-TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGS
T ss_pred HHHHHHHHhhc-cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCC--CceEEEeehHHhhcccc
Confidence 34444554443 57889999999999999999884 5789999999999999999998776 4689999998653
Q ss_pred CCCCcceeeccc
Q 047897 92 EFPQFDLVVANI 103 (232)
Q Consensus 92 ~~~~~D~Vi~n~ 103 (232)
+..+||.|+.+.
T Consensus 125 ~~~~FD~i~~D~ 136 (236)
T 3orh_A 125 PDGHFDGILYDT 136 (236)
T ss_dssp CTTCEEEEEECC
T ss_pred cccCCceEEEee
Confidence 334799998764
No 205
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.21 E-value=1.4e-11 Score=100.33 Aligned_cols=87 Identities=16% Similarity=0.178 Sum_probs=70.1
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCC---ccEEEEEcCCCCCC
Q 047897 16 QRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFH---DRLNVISKDALKTE 92 (232)
Q Consensus 16 ~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~---~~~~~~~~D~~~~~ 92 (232)
..+.+.+.+.+...++.+|||||||+|.++..+++.+.+|+|+|+|+.+++.++++....+.. .++.+..+|+.+++
T Consensus 43 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~ 122 (293)
T 3thr_A 43 AEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLD 122 (293)
T ss_dssp HHHHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHH
T ss_pred HHHHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCc
Confidence 445556666665567889999999999999999998889999999999999999987433221 46889999998865
Q ss_pred -----CCCcceeecc
Q 047897 93 -----FPQFDLVVAN 102 (232)
Q Consensus 93 -----~~~~D~Vi~n 102 (232)
..+||+|+++
T Consensus 123 ~~~~~~~~fD~V~~~ 137 (293)
T 3thr_A 123 KDVPAGDGFDAVICL 137 (293)
T ss_dssp HHSCCTTCEEEEEEC
T ss_pred cccccCCCeEEEEEc
Confidence 3489999985
No 206
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.21 E-value=1.6e-11 Score=96.64 Aligned_cols=77 Identities=19% Similarity=0.298 Sum_probs=62.0
Q ss_pred CCCCEEEEEcCCccHhHHHHHh--cCCeEEEEEcC-HHHHHHH---HHHHhhcCCCccEEEEEcCCCCCCCC---Cccee
Q 047897 29 NPDDTVLEIGPGTGNLTLKLLE--VSKKVHAIEID-ERMVEIL---NRRAADSGFHDRLNVISKDALKTEFP---QFDLV 99 (232)
Q Consensus 29 ~~~~~vLDiG~G~G~~t~~l~~--~~~~v~~vD~~-~~~~~~a---~~~~~~~~~~~~~~~~~~D~~~~~~~---~~D~V 99 (232)
.++.+|||||||+|.++..+++ .+.+|+|+|+| +.|++.| +++....++ .++.++++|+.+++.. .+|.|
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~-~~v~~~~~d~~~l~~~~~d~v~~i 101 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGL-SNVVFVIAAAESLPFELKNIADSI 101 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCC-SSEEEECCBTTBCCGGGTTCEEEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCC-CCeEEEEcCHHHhhhhccCeEEEE
Confidence 5778999999999999999984 67899999999 7777666 888777777 5899999999998643 34566
Q ss_pred ecccCcc
Q 047897 100 VANIPYG 106 (232)
Q Consensus 100 i~n~p~~ 106 (232)
.+|+|+.
T Consensus 102 ~~~~~~~ 108 (225)
T 3p2e_A 102 SILFPWG 108 (225)
T ss_dssp EEESCCH
T ss_pred EEeCCCc
Confidence 6677643
No 207
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.21 E-value=3.6e-11 Score=95.26 Aligned_cols=74 Identities=18% Similarity=0.225 Sum_probs=63.6
Q ss_pred CCCEEEEEcCCccHhHHHHHhc-CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC--CcceeecccC
Q 047897 30 PDDTVLEIGPGTGNLTLKLLEV-SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP--QFDLVVANIP 104 (232)
Q Consensus 30 ~~~~vLDiG~G~G~~t~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~--~~D~Vi~n~p 104 (232)
++.+|||||||+|.++..+++. ..+|+|+|+++.+++.+++++...+. .+++++.+|+.+++.+ +||+|+++..
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 155 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGK-RVRNYFCCGLQDFTPEPDSYDVIWIQWV 155 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGG-GEEEEEECCGGGCCCCSSCEEEEEEESC
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCC-ceEEEEEcChhhcCCCCCCEEEEEEcch
Confidence 5789999999999999999885 56999999999999999999876542 5799999999887654 6999998744
No 208
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.21 E-value=4.4e-11 Score=106.39 Aligned_cols=74 Identities=16% Similarity=0.171 Sum_probs=64.8
Q ss_pred CCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCC----CCCCcceeecccC
Q 047897 30 PDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKT----EFPQFDLVVANIP 104 (232)
Q Consensus 30 ~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~----~~~~~D~Vi~n~p 104 (232)
.+.+|||||||.|.++..|++.+..|+|||.++.+++.|+..+...|. -++++.++|++++ ...+||+|++.-.
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~~~a~~~~~-~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~ 143 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRALAEENPD-FAAEFRVGRIEEVIAALEEGEFDLAIGLSV 143 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTSTT-SEEEEEECCHHHHHHHCCTTSCSEEEEESC
T ss_pred CCCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHhcCC-CceEEEECCHHHHhhhccCCCccEEEECcc
Confidence 456999999999999999999999999999999999999999987764 3699999999876 2348999998643
No 209
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.21 E-value=6.9e-11 Score=93.21 Aligned_cols=77 Identities=21% Similarity=0.308 Sum_probs=64.9
Q ss_pred hcCCCCCCEEEEEcCCccHhHHHHHhc---CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC-----CCCc
Q 047897 25 KSSINPDDTVLEIGPGTGNLTLKLLEV---SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE-----FPQF 96 (232)
Q Consensus 25 ~~~~~~~~~vLDiG~G~G~~t~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~-----~~~~ 96 (232)
.+.+.++.+|||+|||+|.++..+++. ..+|+|+|+++.+++.+.+++... .+++++.+|+.+.. .++|
T Consensus 72 ~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~~~~~ 148 (233)
T 2ipx_A 72 QIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR---TNIIPVIEDARHPHKYRMLIAMV 148 (233)
T ss_dssp CCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC---TTEEEECSCTTCGGGGGGGCCCE
T ss_pred eecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc---CCeEEEEcccCChhhhcccCCcE
Confidence 455678899999999999999999984 379999999999888888887664 57999999998732 2479
Q ss_pred ceeecccC
Q 047897 97 DLVVANIP 104 (232)
Q Consensus 97 D~Vi~n~p 104 (232)
|+|++++|
T Consensus 149 D~V~~~~~ 156 (233)
T 2ipx_A 149 DVIFADVA 156 (233)
T ss_dssp EEEEECCC
T ss_pred EEEEEcCC
Confidence 99999987
No 210
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.19 E-value=5.6e-11 Score=92.12 Aligned_cols=80 Identities=19% Similarity=0.174 Sum_probs=65.9
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC-C
Q 047897 17 RVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP-Q 95 (232)
Q Consensus 17 ~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~-~ 95 (232)
..+..++..+ .++.+|||+|||+|.++..+++.+.+|+|+|+++.+++.+++++ ++.++.+|+.+++.. +
T Consensus 32 ~~~~~~~~~~--~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~d~~~~~~~~~ 102 (211)
T 3e23_A 32 ATLTKFLGEL--PAGAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRL-------GRPVRTMLFHQLDAIDA 102 (211)
T ss_dssp HHHHHHHTTS--CTTCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-------TSCCEECCGGGCCCCSC
T ss_pred HHHHHHHHhc--CCCCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHhc-------CCceEEeeeccCCCCCc
Confidence 4455555544 46789999999999999999998889999999999999999987 366788999888743 7
Q ss_pred cceeecccCc
Q 047897 96 FDLVVANIPY 105 (232)
Q Consensus 96 ~D~Vi~n~p~ 105 (232)
||+|+++..+
T Consensus 103 fD~v~~~~~l 112 (211)
T 3e23_A 103 YDAVWAHACL 112 (211)
T ss_dssp EEEEEECSCG
T ss_pred EEEEEecCch
Confidence 9999987543
No 211
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.19 E-value=4.6e-11 Score=102.76 Aligned_cols=93 Identities=19% Similarity=0.299 Sum_probs=79.0
Q ss_pred CCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCC
Q 047897 14 TNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKT 91 (232)
Q Consensus 14 ~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~ 91 (232)
.+......+...+++.++.+|||+|||+|..|..+++. ..+|+|+|+++.+++.+++++...|. +++++++|+.+.
T Consensus 230 ~qd~~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~--~~~~~~~D~~~~ 307 (429)
T 1sqg_A 230 VQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM--KATVKQGDGRYP 307 (429)
T ss_dssp ECCHHHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC--CCEEEECCTTCT
T ss_pred eeCHHHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC--CeEEEeCchhhc
Confidence 34556666677778889999999999999999999983 37999999999999999999998886 378999999887
Q ss_pred C--C--CCcceeecccCcccc
Q 047897 92 E--F--PQFDLVVANIPYGIS 108 (232)
Q Consensus 92 ~--~--~~~D~Vi~n~p~~~~ 108 (232)
+ + ..||.|++|+|+...
T Consensus 308 ~~~~~~~~fD~Vl~D~Pcsg~ 328 (429)
T 1sqg_A 308 SQWCGEQQFDRILLDAPCSAT 328 (429)
T ss_dssp HHHHTTCCEEEEEEECCCCCG
T ss_pred hhhcccCCCCEEEEeCCCCcc
Confidence 5 2 479999999998654
No 212
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.19 E-value=3.1e-11 Score=94.13 Aligned_cols=82 Identities=23% Similarity=0.294 Sum_probs=63.0
Q ss_pred HHHhcCCCCCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHH----hhcCCCccEEEEEcCCCCCCCC-
Q 047897 22 IVRKSSINPDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRA----ADSGFHDRLNVISKDALKTEFP- 94 (232)
Q Consensus 22 i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~----~~~~~~~~~~~~~~D~~~~~~~- 94 (232)
.++.+.+.++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.+.+++ ...+. ++++++++|+.+++.+
T Consensus 19 ~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~-~~v~~~~~d~~~l~~~~ 97 (218)
T 3mq2_A 19 EFEQLRSQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGL-PNLLYLWATAERLPPLS 97 (218)
T ss_dssp HHHHHHTTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCC-TTEEEEECCSTTCCSCC
T ss_pred HHHHhhccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCC-CceEEEecchhhCCCCC
Confidence 344555678889999999999999999995 789999999999888643333 33454 4899999999998764
Q ss_pred CcceeecccC
Q 047897 95 QFDLVVANIP 104 (232)
Q Consensus 95 ~~D~Vi~n~p 104 (232)
..|.|+..++
T Consensus 98 ~~d~v~~~~~ 107 (218)
T 3mq2_A 98 GVGELHVLMP 107 (218)
T ss_dssp CEEEEEEESC
T ss_pred CCCEEEEEcc
Confidence 2277775555
No 213
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.17 E-value=2.6e-11 Score=96.25 Aligned_cols=77 Identities=16% Similarity=0.205 Sum_probs=64.3
Q ss_pred CCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC-------Ccceee
Q 047897 28 INPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP-------QFDLVV 100 (232)
Q Consensus 28 ~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~-------~~D~Vi 100 (232)
+.++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.+++++.. .+++++++|+.+.+.. .||+|+
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~~~d~v~ 129 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKENTA----ANISYRLLDGLVPEQAAQIHSEIGDANIY 129 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHSCC----TTEEEEECCTTCHHHHHHHHHHHCSCEEE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhCcc----cCceEEECcccccccccccccccCccEEE
Confidence 45778999999999999999999777999999999999999998732 4799999999886543 389999
Q ss_pred cccCcccc
Q 047897 101 ANIPYGIS 108 (232)
Q Consensus 101 ~n~p~~~~ 108 (232)
++..++..
T Consensus 130 ~~~~~~~~ 137 (245)
T 3ggd_A 130 MRTGFHHI 137 (245)
T ss_dssp EESSSTTS
T ss_pred EcchhhcC
Confidence 87654433
No 214
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.17 E-value=4.5e-11 Score=94.69 Aligned_cols=83 Identities=13% Similarity=0.083 Sum_probs=65.6
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc------CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCC
Q 047897 16 QRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV------SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDAL 89 (232)
Q Consensus 16 ~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~ 89 (232)
+.....+.+.+...++.+|||||||+|..+..+++. +.+|+|+|+++.+++.|+. . .++++++++|+.
T Consensus 67 p~~~~~l~~~l~~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~----~--~~~v~~~~gD~~ 140 (236)
T 2bm8_A 67 PDTQAVYHDMLWELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS----D--MENITLHQGDCS 140 (236)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG----G--CTTEEEEECCSS
T ss_pred HHHHHHHHHHHHhcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc----c--CCceEEEECcch
Confidence 666666666555456789999999999999999875 6899999999999988871 1 257999999998
Q ss_pred CC---CC--C-CcceeecccC
Q 047897 90 KT---EF--P-QFDLVVANIP 104 (232)
Q Consensus 90 ~~---~~--~-~~D~Vi~n~p 104 (232)
+. +. . +||+|+++..
T Consensus 141 ~~~~l~~~~~~~fD~I~~d~~ 161 (236)
T 2bm8_A 141 DLTTFEHLREMAHPLIFIDNA 161 (236)
T ss_dssp CSGGGGGGSSSCSSEEEEESS
T ss_pred hHHHHHhhccCCCCEEEECCc
Confidence 84 32 2 6999997654
No 215
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.16 E-value=1.2e-10 Score=91.67 Aligned_cols=67 Identities=18% Similarity=0.261 Sum_probs=59.3
Q ss_pred CCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC-Ccceeec
Q 047897 29 NPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP-QFDLVVA 101 (232)
Q Consensus 29 ~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~-~~D~Vi~ 101 (232)
.++.+|||+|||+|.++..+++.+.+++|+|+++.+++.++++. ++++++.+|+.+.+.+ +||+|++
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~D~v~~ 106 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARKRL------PDATLHQGDMRDFRLGRKFSAVVS 106 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHHHC------TTCEEEECCTTTCCCSSCEEEEEE
T ss_pred CCCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhC------CCCEEEECCHHHcccCCCCcEEEE
Confidence 46789999999999999999987679999999999999999875 4689999999987654 7999994
No 216
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.16 E-value=5.8e-10 Score=93.98 Aligned_cols=85 Identities=18% Similarity=0.276 Sum_probs=72.1
Q ss_pred HHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHh--cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC-
Q 047897 18 VLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLE--VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP- 94 (232)
Q Consensus 18 ~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~- 94 (232)
....+++.++..++.+|||+|||+|.++..+++ +..+++++|+ +.+++.+++++...++.++++++.+|+.+ +.+
T Consensus 190 ~~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~-~~p~ 267 (369)
T 3gwz_A 190 EAGQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFE-TIPD 267 (369)
T ss_dssp HHHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTT-CCCS
T ss_pred hHHHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCC-CCCC
Confidence 345667777777889999999999999999998 4679999999 99999999999888876789999999983 444
Q ss_pred CcceeecccC
Q 047897 95 QFDLVVANIP 104 (232)
Q Consensus 95 ~~D~Vi~n~p 104 (232)
.||+|++.-.
T Consensus 268 ~~D~v~~~~v 277 (369)
T 3gwz_A 268 GADVYLIKHV 277 (369)
T ss_dssp SCSEEEEESC
T ss_pred CceEEEhhhh
Confidence 7999887543
No 217
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.15 E-value=8.3e-11 Score=99.69 Aligned_cols=81 Identities=20% Similarity=0.259 Sum_probs=67.0
Q ss_pred CCCCCEEEEEcCCccHhHHHHHh---cCCeEEEEEcCHHHHHHHHHHHhhc-----C-C-CccEEEEEcCCCCC------
Q 047897 28 INPDDTVLEIGPGTGNLTLKLLE---VSKKVHAIEIDERMVEILNRRAADS-----G-F-HDRLNVISKDALKT------ 91 (232)
Q Consensus 28 ~~~~~~vLDiG~G~G~~t~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~-----~-~-~~~~~~~~~D~~~~------ 91 (232)
+.++.+|||+|||+|.++..+++ .+.+|+|+|+++.+++.+++++... | . .++++++.+|+.++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 45788999999999999999988 3569999999999999999998654 3 2 15799999999876
Q ss_pred CCC--CcceeecccCcccc
Q 047897 92 EFP--QFDLVVANIPYGIS 108 (232)
Q Consensus 92 ~~~--~~D~Vi~n~p~~~~ 108 (232)
+++ +||+|+++..++..
T Consensus 161 ~~~~~~fD~V~~~~~l~~~ 179 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLS 179 (383)
T ss_dssp CCCTTCEEEEEEESCGGGC
T ss_pred CCCCCCEEEEEEccchhcC
Confidence 443 79999998776654
No 218
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.15 E-value=2.5e-10 Score=96.22 Aligned_cols=89 Identities=24% Similarity=0.317 Sum_probs=73.2
Q ss_pred HHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC-C
Q 047897 19 LDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP-Q 95 (232)
Q Consensus 19 ~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~-~ 95 (232)
...+++.+++.++.+|||||||+|.++..+++. ..+++++|+ +.+++.+++++...++.++++++.+|+.+ +.+ .
T Consensus 171 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~ 248 (374)
T 1qzz_A 171 YEAPADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLPVT 248 (374)
T ss_dssp THHHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSCC
T ss_pred HHHHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCCC
Confidence 355666777778899999999999999999983 579999999 99999999999888876689999999986 233 5
Q ss_pred cceeecccCcc-cch
Q 047897 96 FDLVVANIPYG-ISS 109 (232)
Q Consensus 96 ~D~Vi~n~p~~-~~~ 109 (232)
||+|+++..++ +..
T Consensus 249 ~D~v~~~~vl~~~~~ 263 (374)
T 1qzz_A 249 ADVVLLSFVLLNWSD 263 (374)
T ss_dssp EEEEEEESCGGGSCH
T ss_pred CCEEEEeccccCCCH
Confidence 99999865543 443
No 219
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.15 E-value=2e-10 Score=88.89 Aligned_cols=75 Identities=25% Similarity=0.369 Sum_probs=61.6
Q ss_pred HHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCC-eEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC--Ccc
Q 047897 21 SIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSK-KVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP--QFD 97 (232)
Q Consensus 21 ~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~--~~D 97 (232)
.++..+.. ++.+|||+|||+|.++..+ +. +++|+|+++.+++.++++. .+++++++|+.+++.+ +||
T Consensus 28 ~~l~~~~~-~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD 97 (211)
T 2gs9_A 28 RALKGLLP-PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA------PEATWVRAWGEALPFPGESFD 97 (211)
T ss_dssp HHHHTTCC-CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC------TTSEEECCCTTSCCSCSSCEE
T ss_pred HHHHHhcC-CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC------CCcEEEEcccccCCCCCCcEE
Confidence 34444433 7889999999999999888 55 9999999999999999886 3688999999988754 799
Q ss_pred eeecccCc
Q 047897 98 LVVANIPY 105 (232)
Q Consensus 98 ~Vi~n~p~ 105 (232)
+|+++...
T Consensus 98 ~v~~~~~l 105 (211)
T 2gs9_A 98 VVLLFTTL 105 (211)
T ss_dssp EEEEESCT
T ss_pred EEEEcChh
Confidence 99987553
No 220
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.15 E-value=1.9e-10 Score=90.34 Aligned_cols=74 Identities=18% Similarity=0.121 Sum_probs=64.9
Q ss_pred CCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC-CcceeecccCc
Q 047897 29 NPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP-QFDLVVANIPY 105 (232)
Q Consensus 29 ~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~-~~D~Vi~n~p~ 105 (232)
.+..+|||||||+|-++..+. ...+++|+|+|+.+++.+++++...+ .+..+..+|....+.+ ++|+|+++..+
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~-~~~~y~a~DId~~~i~~ar~~~~~~g--~~~~~~v~D~~~~~~~~~~DvvLllk~l 178 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER-GIASVWGCDIHQGLGDVITPFAREKD--WDFTFALQDVLCAPPAEAGDLALIFKLL 178 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT-TCSEEEEEESBHHHHHHHHHHHHHTT--CEEEEEECCTTTSCCCCBCSEEEEESCH
T ss_pred CCCCeEEEecCCccHHHHHhc-cCCeEEEEeCCHHHHHHHHHHHHhcC--CCceEEEeecccCCCCCCcchHHHHHHH
Confidence 457799999999999999988 78899999999999999999998877 4689999999877665 89999987543
No 221
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.15 E-value=6.4e-11 Score=96.81 Aligned_cols=77 Identities=18% Similarity=0.365 Sum_probs=62.2
Q ss_pred CCCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhhcC---C-CccEEEEEcCCCCCC---CCCccee
Q 047897 29 NPDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAADSG---F-HDRLNVISKDALKTE---FPQFDLV 99 (232)
Q Consensus 29 ~~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~---~-~~~~~~~~~D~~~~~---~~~~D~V 99 (232)
.+..+|||||||+|.++..+++. ..+|+++|+|+.+++.|++++...+ + .++++++.+|+.++. .++||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 35679999999999999999984 5789999999999999999986541 1 258999999998763 2479999
Q ss_pred ecccCc
Q 047897 100 VANIPY 105 (232)
Q Consensus 100 i~n~p~ 105 (232)
++|++.
T Consensus 162 i~D~~~ 167 (294)
T 3adn_A 162 ISDCTD 167 (294)
T ss_dssp EECC--
T ss_pred EECCCC
Confidence 998764
No 222
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.14 E-value=8e-11 Score=96.74 Aligned_cols=79 Identities=22% Similarity=0.260 Sum_probs=63.4
Q ss_pred CCCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhh---cCCCccEEEEEcCCCCCC----CCCccee
Q 047897 29 NPDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAAD---SGFHDRLNVISKDALKTE----FPQFDLV 99 (232)
Q Consensus 29 ~~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~---~~~~~~~~~~~~D~~~~~----~~~~D~V 99 (232)
.++.+|||||||+|.++..+++. ..+|+++|+|+.+++.+++++.. ....++++++.+|+.++. ..+||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 46789999999999999999984 57999999999999999998742 112268999999998753 3479999
Q ss_pred ecccCccc
Q 047897 100 VANIPYGI 107 (232)
Q Consensus 100 i~n~p~~~ 107 (232)
++|.+.+.
T Consensus 174 i~d~~~~~ 181 (304)
T 3bwc_A 174 IIDTTDPA 181 (304)
T ss_dssp EEECC---
T ss_pred EECCCCcc
Confidence 99987543
No 223
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.14 E-value=2.5e-10 Score=94.75 Aligned_cols=80 Identities=20% Similarity=0.270 Sum_probs=66.8
Q ss_pred HHhcCCCCCCEEEEEcCCccHhHHHHHh--cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC-Cccee
Q 047897 23 VRKSSINPDDTVLEIGPGTGNLTLKLLE--VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP-QFDLV 99 (232)
Q Consensus 23 ~~~~~~~~~~~vLDiG~G~G~~t~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~-~~D~V 99 (232)
++.++..+..+|||||||+|.++..+++ +..+++++|+ +.+++.+++++...++.++++++.+|+.+ +.+ .||+|
T Consensus 162 ~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~p~~~D~v 239 (332)
T 3i53_A 162 AAKYDWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFD-PLPAGAGGY 239 (332)
T ss_dssp GGSSCCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCCCSCSEE
T ss_pred HHhCCCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCC-CCCCCCcEE
Confidence 3444555678999999999999999988 5679999999 99999999999888876789999999973 344 89999
Q ss_pred ecccC
Q 047897 100 VANIP 104 (232)
Q Consensus 100 i~n~p 104 (232)
++.-.
T Consensus 240 ~~~~v 244 (332)
T 3i53_A 240 VLSAV 244 (332)
T ss_dssp EEESC
T ss_pred EEehh
Confidence 87543
No 224
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.13 E-value=5.1e-11 Score=92.94 Aligned_cols=80 Identities=19% Similarity=0.215 Sum_probs=64.5
Q ss_pred HHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCC---C--CC
Q 047897 20 DSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKT---E--FP 94 (232)
Q Consensus 20 ~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~---~--~~ 94 (232)
..+++.+...++.+|||+|||+|.++..+++.+.+|+|+|+++.+++.++++ .++.++.+|+.++ + ..
T Consensus 42 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~~ 114 (227)
T 3e8s_A 42 QAILLAILGRQPERVLDLGCGEGWLLRALADRGIEAVGVDGDRTLVDAARAA-------GAGEVHLASYAQLAEAKVPVG 114 (227)
T ss_dssp HHHHHHHHHTCCSEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHT-------CSSCEEECCHHHHHTTCSCCC
T ss_pred HHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHCCCEEEEEcCCHHHHHHHHHh-------cccccchhhHHhhcccccccC
Confidence 4455555555678999999999999999999888999999999999999987 2467888888776 2 23
Q ss_pred -CcceeecccCcc
Q 047897 95 -QFDLVVANIPYG 106 (232)
Q Consensus 95 -~~D~Vi~n~p~~ 106 (232)
+||+|+++..++
T Consensus 115 ~~fD~v~~~~~l~ 127 (227)
T 3e8s_A 115 KDYDLICANFALL 127 (227)
T ss_dssp CCEEEEEEESCCC
T ss_pred CCccEEEECchhh
Confidence 599999976544
No 225
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.13 E-value=2.7e-10 Score=95.22 Aligned_cols=84 Identities=14% Similarity=0.206 Sum_probs=70.9
Q ss_pred HHHHhcCCCC-CCEEEEEcCCccHhHHHHHh--cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC--CC-
Q 047897 21 SIVRKSSINP-DDTVLEIGPGTGNLTLKLLE--VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE--FP- 94 (232)
Q Consensus 21 ~i~~~~~~~~-~~~vLDiG~G~G~~t~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~--~~- 94 (232)
.+++.++..+ +.+|||||||+|.++..+++ +..+++++|+ +.+++.++++....++.++++++.+|+.+.+ .+
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 247 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGG 247 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTC
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCC
Confidence 5566666666 78999999999999999998 4679999999 8899999999988877678999999999875 44
Q ss_pred CcceeecccCc
Q 047897 95 QFDLVVANIPY 105 (232)
Q Consensus 95 ~~D~Vi~n~p~ 105 (232)
.||+|+++-..
T Consensus 248 ~~D~v~~~~vl 258 (352)
T 3mcz_A 248 AADVVMLNDCL 258 (352)
T ss_dssp CEEEEEEESCG
T ss_pred CccEEEEeccc
Confidence 69999985443
No 226
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.13 E-value=5e-10 Score=93.93 Aligned_cols=85 Identities=18% Similarity=0.287 Sum_probs=70.0
Q ss_pred HHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCCCcc
Q 047897 20 DSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFD 97 (232)
Q Consensus 20 ~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~~~D 97 (232)
..+++.++..++.+|||||||+|.++..+++. ..+++++|+ +.+++.+++++...++.++++++.+|+.+.....||
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D 251 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPRKAD 251 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCCSSCEE
T ss_pred HHHHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCCCCCcc
Confidence 45566667778889999999999999999883 578999999 999999999998888766899999999863222599
Q ss_pred eeecccCc
Q 047897 98 LVVANIPY 105 (232)
Q Consensus 98 ~Vi~n~p~ 105 (232)
+|+++..+
T Consensus 252 ~v~~~~vl 259 (360)
T 1tw3_A 252 AIILSFVL 259 (360)
T ss_dssp EEEEESCG
T ss_pred EEEEcccc
Confidence 98886554
No 227
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.13 E-value=1.4e-10 Score=94.04 Aligned_cols=78 Identities=21% Similarity=0.376 Sum_probs=64.6
Q ss_pred CCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhhc--CC-CccEEEEEcCCCCC---CCCCcceeec
Q 047897 30 PDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAADS--GF-HDRLNVISKDALKT---EFPQFDLVVA 101 (232)
Q Consensus 30 ~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~--~~-~~~~~~~~~D~~~~---~~~~~D~Vi~ 101 (232)
.+.+|||||||+|.++..+++. ..+|+++|+|+.+++.|++++... ++ .++++++.+|+.+. ..++||+|++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~ 154 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV 154 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEE
Confidence 5679999999999999999984 479999999999999999998542 22 36899999999764 2347999999
Q ss_pred ccCccc
Q 047897 102 NIPYGI 107 (232)
Q Consensus 102 n~p~~~ 107 (232)
|+|.+.
T Consensus 155 d~~~~~ 160 (275)
T 1iy9_A 155 DSTEPV 160 (275)
T ss_dssp SCSSCC
T ss_pred CCCCCC
Confidence 987643
No 228
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.12 E-value=1.1e-10 Score=97.14 Aligned_cols=77 Identities=23% Similarity=0.397 Sum_probs=63.9
Q ss_pred CCCCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhhc--CC-CccEEEEEcCCCCC----CCCCcce
Q 047897 28 INPDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAADS--GF-HDRLNVISKDALKT----EFPQFDL 98 (232)
Q Consensus 28 ~~~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~--~~-~~~~~~~~~D~~~~----~~~~~D~ 98 (232)
...+.+|||||||+|.++..+++. ..+|+++|+|+.+++.|++++... ++ .++++++.+|+.+. +..+||+
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDl 197 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDA 197 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEE
T ss_pred CCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccE
Confidence 345679999999999999999984 579999999999999999998642 33 25899999998764 2347999
Q ss_pred eecccC
Q 047897 99 VVANIP 104 (232)
Q Consensus 99 Vi~n~p 104 (232)
|++|++
T Consensus 198 Ii~d~~ 203 (334)
T 1xj5_A 198 VIVDSS 203 (334)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 999875
No 229
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.11 E-value=5.9e-10 Score=93.76 Aligned_cols=76 Identities=20% Similarity=0.351 Sum_probs=65.6
Q ss_pred CCCCEEEEEcCCccHhHHHHHh--cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCC--CCC-Ccceeeccc
Q 047897 29 NPDDTVLEIGPGTGNLTLKLLE--VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKT--EFP-QFDLVVANI 103 (232)
Q Consensus 29 ~~~~~vLDiG~G~G~~t~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~--~~~-~~D~Vi~n~ 103 (232)
....+|||||||+|.++..+++ ++.+++++|+ +.+++.+++++...++.++++++.+|+.+. +.+ .||+|++.-
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~~ 256 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWMSQ 256 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEEES
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEEec
Confidence 4567999999999999999998 5789999999 999999999998887767899999999986 354 899988754
Q ss_pred Cc
Q 047897 104 PY 105 (232)
Q Consensus 104 p~ 105 (232)
..
T Consensus 257 vl 258 (363)
T 3dp7_A 257 FL 258 (363)
T ss_dssp CS
T ss_pred hh
Confidence 43
No 230
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.11 E-value=1.6e-10 Score=92.51 Aligned_cols=79 Identities=13% Similarity=0.144 Sum_probs=62.8
Q ss_pred CCCCCCEEEEEcCCccHhHHHHHhcCC-eEEEEEcCHHHHHHHHHHHhhcCC----------------------------
Q 047897 27 SINPDDTVLEIGPGTGNLTLKLLEVSK-KVHAIEIDERMVEILNRRAADSGF---------------------------- 77 (232)
Q Consensus 27 ~~~~~~~vLDiG~G~G~~t~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~---------------------------- 77 (232)
...++.+|||+|||+|.++..++..+. +|+|+|+++.+++.+++++...+.
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 335678999999999999999888665 999999999999999998865320
Q ss_pred CccE-EEEEcCCCCCCC------CCcceeecccCc
Q 047897 78 HDRL-NVISKDALKTEF------PQFDLVVANIPY 105 (232)
Q Consensus 78 ~~~~-~~~~~D~~~~~~------~~~D~Vi~n~p~ 105 (232)
..++ .++.+|+.+.+. ++||+|+++...
T Consensus 133 ~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l 167 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCL 167 (265)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCH
T ss_pred hhhheeEEEeeeccCCCCCccccCCccEEEEhhhh
Confidence 0127 999999987642 479999987543
No 231
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.11 E-value=4.5e-10 Score=89.95 Aligned_cols=67 Identities=28% Similarity=0.415 Sum_probs=58.5
Q ss_pred CCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC--Ccceeeccc
Q 047897 30 PDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP--QFDLVVANI 103 (232)
Q Consensus 30 ~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~--~~D~Vi~n~ 103 (232)
++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.++++.. .+ ++.+|+.+++.+ +||+|+++.
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~-----~~--~~~~d~~~~~~~~~~fD~v~~~~ 122 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAREKGV-----KN--VVEAKAEDLPFPSGAFEAVLALG 122 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHHTC-----SC--EEECCTTSCCSCTTCEEEEEECS
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHHHHHHHHhhcC-----CC--EEECcHHHCCCCCCCEEEEEEcc
Confidence 67899999999999999999988899999999999999998864 12 889999887753 799999853
No 232
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.11 E-value=4.4e-10 Score=90.97 Aligned_cols=88 Identities=17% Similarity=0.116 Sum_probs=66.1
Q ss_pred HHHHHHHHHhcC-CCCCCEEEEEcCCc---cHhHHHHHh--cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCC
Q 047897 16 QRVLDSIVRKSS-INPDDTVLEIGPGT---GNLTLKLLE--VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDAL 89 (232)
Q Consensus 16 ~~~~~~i~~~~~-~~~~~~vLDiG~G~---G~~t~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~ 89 (232)
+.+++.+++.+. ..+..+|||||||+ |.++..+.+ .+.+|+++|+|+.|++.+++++... ++++++.+|+.
T Consensus 62 ~~~~~~~~~~l~~~~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~---~~v~~~~~D~~ 138 (274)
T 2qe6_A 62 RKVLVRGVRFLAGEAGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKD---PNTAVFTADVR 138 (274)
T ss_dssp HHHHHHHHHHHHTTTCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTC---TTEEEEECCTT
T ss_pred hHHHHHHHHHHhhccCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCC---CCeEEEEeeCC
Confidence 344445555443 23447999999999 988876665 4689999999999999999998542 57999999997
Q ss_pred C-------------CCCCCcceeecccCcc
Q 047897 90 K-------------TEFPQFDLVVANIPYG 106 (232)
Q Consensus 90 ~-------------~~~~~~D~Vi~n~p~~ 106 (232)
+ +++++||+|+++..++
T Consensus 139 ~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh 168 (274)
T 2qe6_A 139 DPEYILNHPDVRRMIDFSRPAAIMLVGMLH 168 (274)
T ss_dssp CHHHHHHSHHHHHHCCTTSCCEEEETTTGG
T ss_pred CchhhhccchhhccCCCCCCEEEEEechhh
Confidence 5 3345789998875444
No 233
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.11 E-value=3.1e-10 Score=93.09 Aligned_cols=75 Identities=17% Similarity=0.129 Sum_probs=57.0
Q ss_pred CCCEEEEEcCCccHhHHHHHh-cCCeEEEEEcCHHHHHHHHHHHhhcCCCc-----cEEEEEcCC------CC----CCC
Q 047897 30 PDDTVLEIGPGTGNLTLKLLE-VSKKVHAIEIDERMVEILNRRAADSGFHD-----RLNVISKDA------LK----TEF 93 (232)
Q Consensus 30 ~~~~vLDiG~G~G~~t~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-----~~~~~~~D~------~~----~~~ 93 (232)
++.+|||||||+|..+..++. .+.+|+|+|+|+.|++.|+++....+... ++++..+|+ .+ .+.
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 478999999999987766665 45799999999999999999987654311 367888887 22 233
Q ss_pred CCcceeecccC
Q 047897 94 PQFDLVVANIP 104 (232)
Q Consensus 94 ~~~D~Vi~n~p 104 (232)
++||+|++...
T Consensus 128 ~~FD~V~~~~~ 138 (302)
T 2vdw_A 128 GKFNIIDWQFA 138 (302)
T ss_dssp SCEEEEEEESC
T ss_pred CCeeEEEECch
Confidence 58999998643
No 234
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.11 E-value=1.7e-10 Score=94.68 Aligned_cols=79 Identities=20% Similarity=0.351 Sum_probs=64.1
Q ss_pred CCCCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhh--cCC-CccEEEEEcCCCCC---CCCCccee
Q 047897 28 INPDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAAD--SGF-HDRLNVISKDALKT---EFPQFDLV 99 (232)
Q Consensus 28 ~~~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~--~~~-~~~~~~~~~D~~~~---~~~~~D~V 99 (232)
...+.+|||||||+|.++..+++. ..+|+++|+|+.+++.|++++.. .++ .++++++.+|+.+. ...+||+|
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~I 172 (304)
T 2o07_A 93 HPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVI 172 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEE
Confidence 345679999999999999999984 47999999999999999999864 232 36899999999763 23479999
Q ss_pred ecccCcc
Q 047897 100 VANIPYG 106 (232)
Q Consensus 100 i~n~p~~ 106 (232)
++|.|.+
T Consensus 173 i~d~~~~ 179 (304)
T 2o07_A 173 ITDSSDP 179 (304)
T ss_dssp EEECC--
T ss_pred EECCCCC
Confidence 9998754
No 235
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.10 E-value=1e-10 Score=95.01 Aligned_cols=78 Identities=23% Similarity=0.373 Sum_probs=64.3
Q ss_pred CCCCEEEEEcCCccHhHHHHHhc-CCeEEEEEcCHHHHHHHHHHHhhc--CC--------CccEEEEEcCCCCCC--CCC
Q 047897 29 NPDDTVLEIGPGTGNLTLKLLEV-SKKVHAIEIDERMVEILNRRAADS--GF--------HDRLNVISKDALKTE--FPQ 95 (232)
Q Consensus 29 ~~~~~vLDiG~G~G~~t~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~--~~--------~~~~~~~~~D~~~~~--~~~ 95 (232)
..+.+|||||||+|.++..+++. ..+|+++|+|+.+++.|++++ .. ++ .++++++.+|+.+.. ..+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~ 152 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRG 152 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcccCC
Confidence 45679999999999999999985 569999999999999999998 33 22 368999999986542 357
Q ss_pred cceeecccCccc
Q 047897 96 FDLVVANIPYGI 107 (232)
Q Consensus 96 ~D~Vi~n~p~~~ 107 (232)
||+|++|+|.+.
T Consensus 153 fD~Ii~d~~~~~ 164 (281)
T 1mjf_A 153 FDVIIADSTDPV 164 (281)
T ss_dssp EEEEEEECCCCC
T ss_pred eeEEEECCCCCC
Confidence 999999988643
No 236
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=99.10 E-value=1.4e-10 Score=92.88 Aligned_cols=91 Identities=12% Similarity=0.144 Sum_probs=78.8
Q ss_pred ccCCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCC
Q 047897 12 ILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKT 91 (232)
Q Consensus 12 fl~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~ 91 (232)
|.+-|-+++.+++.+.+.+++.++|.+||.|+.|..+++.+.+|+|+|.|+.+++.+++ +.. +++.++++|+.++
T Consensus 4 ~~H~pVLl~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~~g~VigiD~Dp~Ai~~A~~-L~~----~rv~lv~~~f~~l 78 (285)
T 1wg8_A 4 MTHVPVLYQEALDLLAVRPGGVYVDATLGGAGHARGILERGGRVIGLDQDPEAVARAKG-LHL----PGLTVVQGNFRHL 78 (285)
T ss_dssp CCCCCTTHHHHHHHHTCCTTCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHH-TCC----TTEEEEESCGGGH
T ss_pred CCchhHHHHHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHCCCEEEEEeCCHHHHHHHHh-hcc----CCEEEEECCcchH
Confidence 34557889999999999999999999999999999999988899999999999999998 644 4899999999876
Q ss_pred C-------CCCcceeecccCccc
Q 047897 92 E-------FPQFDLVVANIPYGI 107 (232)
Q Consensus 92 ~-------~~~~D~Vi~n~p~~~ 107 (232)
+ ..++|.|+.|+.+..
T Consensus 79 ~~~L~~~g~~~vDgIL~DLGvSS 101 (285)
T 1wg8_A 79 KRHLAALGVERVDGILADLGVSS 101 (285)
T ss_dssp HHHHHHTTCSCEEEEEEECSCCH
T ss_pred HHHHHHcCCCCcCEEEeCCcccc
Confidence 3 246899999987654
No 237
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.09 E-value=3.5e-10 Score=86.65 Aligned_cols=69 Identities=26% Similarity=0.388 Sum_probs=57.0
Q ss_pred CCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCC-------------C
Q 047897 28 INPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEF-------------P 94 (232)
Q Consensus 28 ~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~-------------~ 94 (232)
+.++.+|||+|||+|.++..+++.+.+|+|+|+++.. .. ++++++++|+.+.+. +
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~-----------~~-~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEME-----------EI-AGVRFIRCDIFKETIFDDIDRALREEGIE 90 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCC-----------CC-TTCEEEECCTTSSSHHHHHHHHHHHHTCS
T ss_pred CCCCCEEEEEeecCCHHHHHHHHcCCcEEEEeccccc-----------cC-CCeEEEEccccCHHHHHHHHHHhhcccCC
Confidence 4678999999999999999999988999999999741 12 579999999988641 3
Q ss_pred CcceeecccCcccc
Q 047897 95 QFDLVVANIPYGIS 108 (232)
Q Consensus 95 ~~D~Vi~n~p~~~~ 108 (232)
.||+|++|++.+.+
T Consensus 91 ~~D~Vlsd~~~~~~ 104 (191)
T 3dou_A 91 KVDDVVSDAMAKVS 104 (191)
T ss_dssp SEEEEEECCCCCCC
T ss_pred cceEEecCCCcCCC
Confidence 89999999865443
No 238
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.09 E-value=5.3e-10 Score=89.89 Aligned_cols=69 Identities=14% Similarity=0.313 Sum_probs=60.1
Q ss_pred CCCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC--Ccceeeccc
Q 047897 29 NPDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP--QFDLVVANI 103 (232)
Q Consensus 29 ~~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~--~~D~Vi~n~ 103 (232)
.++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.++++. .++.++.+|+.+++.+ +||+|+++.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~ 156 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY------PQVTFCVASSHRLPFSDTSMDAIIRIY 156 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC------TTSEEEECCTTSCSBCTTCEEEEEEES
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC------CCcEEEEcchhhCCCCCCceeEEEEeC
Confidence 46789999999999999999984 689999999999999998875 4688999999887653 799999864
No 239
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.09 E-value=4.9e-10 Score=92.99 Aligned_cols=86 Identities=19% Similarity=0.283 Sum_probs=70.9
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHh--cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC
Q 047897 17 RVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLE--VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP 94 (232)
Q Consensus 17 ~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~ 94 (232)
.....+++.++..+ .+|||+|||+|.++..+++ +..+++++|+ +.+++.+++++...++.++++++.+|+.+ +.+
T Consensus 155 ~~~~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~ 231 (334)
T 2ip2_A 155 LAFHEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP 231 (334)
T ss_dssp HHHHHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC
T ss_pred HHHHHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC
Confidence 34566777777666 8999999999999999988 3679999999 99999999998776655689999999987 343
Q ss_pred -CcceeecccCc
Q 047897 95 -QFDLVVANIPY 105 (232)
Q Consensus 95 -~~D~Vi~n~p~ 105 (232)
.||+|+++-..
T Consensus 232 ~~~D~v~~~~vl 243 (334)
T 2ip2_A 232 SNGDIYLLSRII 243 (334)
T ss_dssp SSCSEEEEESCG
T ss_pred CCCCEEEEchhc
Confidence 69999986554
No 240
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.07 E-value=2.5e-10 Score=93.44 Aligned_cols=77 Identities=21% Similarity=0.336 Sum_probs=61.7
Q ss_pred CCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhh--cCC-CccEEEEEcCCCCC-C--CCCcceeec
Q 047897 30 PDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAAD--SGF-HDRLNVISKDALKT-E--FPQFDLVVA 101 (232)
Q Consensus 30 ~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~--~~~-~~~~~~~~~D~~~~-~--~~~~D~Vi~ 101 (232)
.+.+|||||||+|.++..+++. ..+|+++|+|+.+++.+++++.. .++ .++++++.+|+.+. + ..+||+|++
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 4579999999999999999984 57999999999999999999854 222 26899999998763 2 247999999
Q ss_pred ccCcc
Q 047897 102 NIPYG 106 (232)
Q Consensus 102 n~p~~ 106 (232)
|+|.+
T Consensus 170 d~~~~ 174 (296)
T 1inl_A 170 DSTDP 174 (296)
T ss_dssp EC---
T ss_pred cCCCc
Confidence 98754
No 241
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.07 E-value=3.5e-10 Score=93.29 Aligned_cols=79 Identities=24% Similarity=0.420 Sum_probs=65.2
Q ss_pred CCCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhh--cC-C-CccEEEEEcCCCCC---CCCCccee
Q 047897 29 NPDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAAD--SG-F-HDRLNVISKDALKT---EFPQFDLV 99 (232)
Q Consensus 29 ~~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~--~~-~-~~~~~~~~~D~~~~---~~~~~D~V 99 (232)
..+.+|||||||+|.++..+++. ..+|+++|+|+.+++.|++++.. .+ + .++++++.+|+.+. ...+||+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 35679999999999999999984 57999999999999999999864 12 1 26899999999774 23479999
Q ss_pred ecccCccc
Q 047897 100 VANIPYGI 107 (232)
Q Consensus 100 i~n~p~~~ 107 (232)
+++.+.+.
T Consensus 156 i~d~~~~~ 163 (314)
T 1uir_A 156 IIDLTDPV 163 (314)
T ss_dssp EEECCCCB
T ss_pred EECCCCcc
Confidence 99987654
No 242
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.07 E-value=1.4e-10 Score=91.83 Aligned_cols=79 Identities=23% Similarity=0.262 Sum_probs=62.3
Q ss_pred HHHHHHHHhcC-CCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCC--C-
Q 047897 17 RVLDSIVRKSS-INPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKT--E- 92 (232)
Q Consensus 17 ~~~~~i~~~~~-~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~--~- 92 (232)
.+.+.+...+. +.++.+|||||||+|.++..+++.+.+|+|+|+|+.+++.++++ ++++.+|+.+. +
T Consensus 27 ~~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~---------~~~~~~d~~~~~~~~ 97 (240)
T 3dli_A 27 LVKARLRRYIPYFKGCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFCEGK---------FNVVKSDAIEYLKSL 97 (240)
T ss_dssp HHHHHHGGGGGGTTTCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHHHTT---------SEEECSCHHHHHHTS
T ss_pred HHHHHHHHHHhhhcCCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHHHHHhh---------cceeeccHHHHhhhc
Confidence 34444444443 35678999999999999999998888999999999999988765 66888998774 3
Q ss_pred -CCCcceeecccC
Q 047897 93 -FPQFDLVVANIP 104 (232)
Q Consensus 93 -~~~~D~Vi~n~p 104 (232)
..+||+|+++-.
T Consensus 98 ~~~~fD~i~~~~~ 110 (240)
T 3dli_A 98 PDKYLDGVMISHF 110 (240)
T ss_dssp CTTCBSEEEEESC
T ss_pred CCCCeeEEEECCc
Confidence 348999998644
No 243
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.06 E-value=1.8e-10 Score=95.37 Aligned_cols=76 Identities=25% Similarity=0.439 Sum_probs=63.2
Q ss_pred CCCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhhc--CC-CccEEEEEcCCCCC---CCCCcceee
Q 047897 29 NPDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAADS--GF-HDRLNVISKDALKT---EFPQFDLVV 100 (232)
Q Consensus 29 ~~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~--~~-~~~~~~~~~D~~~~---~~~~~D~Vi 100 (232)
..+.+|||||||+|.++..+++. ..+|+++|+|+.+++.|++++... ++ .++++++.+|+.+. ..++||+|+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 35679999999999999999984 589999999999999999998652 22 25899999998764 234799999
Q ss_pred cccC
Q 047897 101 ANIP 104 (232)
Q Consensus 101 ~n~p 104 (232)
+|++
T Consensus 195 ~d~~ 198 (321)
T 2pt6_A 195 VDSS 198 (321)
T ss_dssp EECC
T ss_pred ECCc
Confidence 9874
No 244
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.06 E-value=1.5e-10 Score=93.06 Aligned_cols=79 Identities=18% Similarity=0.180 Sum_probs=60.3
Q ss_pred CCCCCCEEEEEcCCccHhHHHHHhcC-CeEEEEEcCHHHHHHHHHHHhhcCC----------------------------
Q 047897 27 SINPDDTVLEIGPGTGNLTLKLLEVS-KKVHAIEIDERMVEILNRRAADSGF---------------------------- 77 (232)
Q Consensus 27 ~~~~~~~vLDiG~G~G~~t~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~---------------------------- 77 (232)
...++.+|||||||+|.++..++..+ .+|+|+|+|+.+++.|++++.....
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 44577899999999998887777655 4799999999999999988754310
Q ss_pred CccEE-EEEcCCCCC-C-----CCCcceeecccCc
Q 047897 78 HDRLN-VISKDALKT-E-----FPQFDLVVANIPY 105 (232)
Q Consensus 78 ~~~~~-~~~~D~~~~-~-----~~~~D~Vi~n~p~ 105 (232)
..++. ++.+|+.+. + .++||+|+++...
T Consensus 132 ~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l 166 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAM 166 (263)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCH
T ss_pred HhhhheEEeccccCCCCCCccccCCCCEeeehHHH
Confidence 01344 899999884 2 3479999998654
No 245
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.06 E-value=3.9e-11 Score=97.18 Aligned_cols=83 Identities=19% Similarity=0.178 Sum_probs=61.5
Q ss_pred HHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhh-cCCCccEEEE--EcCCCCCCCCCc
Q 047897 20 DSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAAD-SGFHDRLNVI--SKDALKTEFPQF 96 (232)
Q Consensus 20 ~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~~~~~--~~D~~~~~~~~~ 96 (232)
..+.+...+.++.+|||+|||+|.++..+++. .+|+|+|+++ ++..+++.... .....++.++ ++|+.+++..+|
T Consensus 72 ~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~-~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~~~~f 149 (276)
T 2wa2_A 72 AWIDERGGVELKGTVVDLGCGRGSWSYYAASQ-PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKMEPFQA 149 (276)
T ss_dssp HHHHHTTSCCCCEEEEEESCTTCHHHHHHHTS-TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCCCCCC
T ss_pred HHHHHcCCCCCCCEEEEeccCCCHHHHHHHHc-CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCCCCCc
Confidence 44555544567889999999999999999988 8999999998 54333221110 0111268999 999999886689
Q ss_pred ceeecccC
Q 047897 97 DLVVANIP 104 (232)
Q Consensus 97 D~Vi~n~p 104 (232)
|+|+++..
T Consensus 150 D~Vvsd~~ 157 (276)
T 2wa2_A 150 DTVLCDIG 157 (276)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 99999876
No 246
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.05 E-value=4.4e-10 Score=89.10 Aligned_cols=75 Identities=15% Similarity=0.164 Sum_probs=64.6
Q ss_pred CCCCEEEEEcCCccHhHHHHHh--cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC-CcceeecccCc
Q 047897 29 NPDDTVLEIGPGTGNLTLKLLE--VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP-QFDLVVANIPY 105 (232)
Q Consensus 29 ~~~~~vLDiG~G~G~~t~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~-~~D~Vi~n~p~ 105 (232)
.+..+|||||||.|-++..++. ...+|+|+|+|+.+++.+++++...|+. ..+...|...-+.+ .+|+++++..+
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~--~~~~v~D~~~~~p~~~~DvaL~lkti 208 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVP--HRTNVADLLEDRLDEPADVTLLLKTL 208 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCC--EEEEECCTTTSCCCSCCSEEEETTCH
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCC--ceEEEeeecccCCCCCcchHHHHHHH
Confidence 3466999999999999999887 4689999999999999999999998864 88899998876554 89999987643
No 247
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.05 E-value=1.8e-10 Score=97.40 Aligned_cols=85 Identities=16% Similarity=0.187 Sum_probs=70.3
Q ss_pred CCCCEEEEEcCCccHhHHHHHhc--C-CeEEEEEcCHHHHHHHHHHHhhcCCCcc-EEEEEcCCCCCC----CCCcceee
Q 047897 29 NPDDTVLEIGPGTGNLTLKLLEV--S-KKVHAIEIDERMVEILNRRAADSGFHDR-LNVISKDALKTE----FPQFDLVV 100 (232)
Q Consensus 29 ~~~~~vLDiG~G~G~~t~~l~~~--~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~-~~~~~~D~~~~~----~~~~D~Vi 100 (232)
.++.+|||++||+|.++..++.. + .+|+++|+++.+++.+++|++.+++.++ ++++++|+.++. ...||+|+
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~ 130 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVD 130 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEE
Confidence 35789999999999999999983 4 6899999999999999999999998655 999999996642 23799999
Q ss_pred cccCcccchHHHHH
Q 047897 101 ANIPYGISSPLVAK 114 (232)
Q Consensus 101 ~n~p~~~~~~~l~~ 114 (232)
.|+ |....+++..
T Consensus 131 lDP-~g~~~~~l~~ 143 (392)
T 3axs_A 131 LDP-FGTPVPFIES 143 (392)
T ss_dssp ECC-SSCCHHHHHH
T ss_pred ECC-CcCHHHHHHH
Confidence 997 5544455443
No 248
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.05 E-value=1.9e-10 Score=94.76 Aligned_cols=77 Identities=26% Similarity=0.473 Sum_probs=63.7
Q ss_pred CCCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhhc--CC-CccEEEEEcCCCCC---CCCCcceee
Q 047897 29 NPDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAADS--GF-HDRLNVISKDALKT---EFPQFDLVV 100 (232)
Q Consensus 29 ~~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~--~~-~~~~~~~~~D~~~~---~~~~~D~Vi 100 (232)
..+.+|||||||+|.++..+++. ..+|+++|+|+.+++.|++++... ++ .++++++.+|+.+. ...+||+|+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 35679999999999999999984 579999999999999999998653 22 36899999999764 234799999
Q ss_pred cccCc
Q 047897 101 ANIPY 105 (232)
Q Consensus 101 ~n~p~ 105 (232)
+|.+.
T Consensus 187 ~d~~~ 191 (314)
T 2b2c_A 187 TDSSD 191 (314)
T ss_dssp ECCC-
T ss_pred EcCCC
Confidence 98853
No 249
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.05 E-value=2.9e-10 Score=93.36 Aligned_cols=72 Identities=11% Similarity=0.188 Sum_probs=61.4
Q ss_pred CEEEEEcCCccHhHHHHHh--cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCC----CCCCcceeecccC
Q 047897 32 DTVLEIGPGTGNLTLKLLE--VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKT----EFPQFDLVVANIP 104 (232)
Q Consensus 32 ~~vLDiG~G~G~~t~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~----~~~~~D~Vi~n~p 104 (232)
.+|||||||+|.++..+++ .+.+|++||+|+.+++.|++++.... .++++++.+|+.++ +..+||+|+++.+
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~-~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~ 168 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPR-APRVKIRVDDARMVAESFTPASRDVIIRDVF 168 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCC-TTTEEEEESCHHHHHHTCCTTCEEEEEECCS
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccC-CCceEEEECcHHHHHhhccCCCCCEEEECCC
Confidence 4899999999999999998 46799999999999999999986532 26899999999765 2347999999864
No 250
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.05 E-value=6.8e-11 Score=96.05 Aligned_cols=88 Identities=16% Similarity=0.183 Sum_probs=61.1
Q ss_pred HHHHHHHhcCCC-CCCEEEEEcCCccHhHHHHHhcC-CeEEEEEcCHHHHHHHHHHHhhcCCCccEEEE-EcCCCC----
Q 047897 18 VLDSIVRKSSIN-PDDTVLEIGPGTGNLTLKLLEVS-KKVHAIEIDERMVEILNRRAADSGFHDRLNVI-SKDALK---- 90 (232)
Q Consensus 18 ~~~~i~~~~~~~-~~~~vLDiG~G~G~~t~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~-~~D~~~---- 90 (232)
-+..+++.+.+. ++.+|||+|||+|.+|..+++.+ .+|+|+|+++.|++.+.++. +++... ..|+..
T Consensus 72 Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~------~rv~~~~~~ni~~l~~~ 145 (291)
T 3hp7_A 72 KLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQD------DRVRSMEQYNFRYAEPV 145 (291)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTC------TTEEEECSCCGGGCCGG
T ss_pred HHHHHHHhcCCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC------cccceecccCceecchh
Confidence 344566666655 56799999999999999998865 69999999999998854432 233322 233333
Q ss_pred -CCCCCcceeecccCcccchHH
Q 047897 91 -TEFPQFDLVVANIPYGISSPL 111 (232)
Q Consensus 91 -~~~~~~D~Vi~n~p~~~~~~~ 111 (232)
++.++||.|+++..|+.....
T Consensus 146 ~l~~~~fD~v~~d~sf~sl~~v 167 (291)
T 3hp7_A 146 DFTEGLPSFASIDVSFISLNLI 167 (291)
T ss_dssp GCTTCCCSEEEECCSSSCGGGT
T ss_pred hCCCCCCCEEEEEeeHhhHHHH
Confidence 233359999999887655433
No 251
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.04 E-value=4.6e-11 Score=96.24 Aligned_cols=84 Identities=10% Similarity=0.098 Sum_probs=61.7
Q ss_pred HHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhh-cCCCccEEEE--EcCCCCCCCCC
Q 047897 19 LDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAAD-SGFHDRLNVI--SKDALKTEFPQ 95 (232)
Q Consensus 19 ~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~~~~~--~~D~~~~~~~~ 95 (232)
+..+.+...+.++.+|||+|||+|.++..+++. .+|+|+|+++ ++..+++.... .....++.++ ++|+.+++..+
T Consensus 63 L~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~-~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~~~~ 140 (265)
T 2oxt_A 63 LAWMEERGYVELTGRVVDLGCGRGGWSYYAASR-PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLPVER 140 (265)
T ss_dssp HHHHHHHTSCCCCEEEEEESCTTSHHHHHHHTS-TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSCCCC
T ss_pred HHHHHHcCCCCCCCEEEEeCcCCCHHHHHHHHc-CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCCCCC
Confidence 345555545667889999999999999999988 8999999998 53322211100 0011268899 99999988668
Q ss_pred cceeecccC
Q 047897 96 FDLVVANIP 104 (232)
Q Consensus 96 ~D~Vi~n~p 104 (232)
||+|+++..
T Consensus 141 fD~V~sd~~ 149 (265)
T 2oxt_A 141 TDVIMCDVG 149 (265)
T ss_dssp CSEEEECCC
T ss_pred CcEEEEeCc
Confidence 999999876
No 252
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.04 E-value=6.9e-10 Score=86.62 Aligned_cols=79 Identities=23% Similarity=0.256 Sum_probs=63.1
Q ss_pred HHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCC--CCC--
Q 047897 18 VLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALK--TEF-- 93 (232)
Q Consensus 18 ~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~--~~~-- 93 (232)
+...+++.+. .++.+|||+|||+|.++..+++.+.+++|+|+++.+++.++++. .+++.+|+.+ .+.
T Consensus 21 ~~~~l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~--------~~~~~~d~~~~~~~~~~ 91 (230)
T 3cc8_A 21 VNPNLLKHIK-KEWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAKEKL--------DHVVLGDIETMDMPYEE 91 (230)
T ss_dssp CCHHHHTTCC-TTCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHHHHHHTTS--------SEEEESCTTTCCCCSCT
T ss_pred HHHHHHHHhc-cCCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC--------CcEEEcchhhcCCCCCC
Confidence 3445566665 67889999999999999999987789999999999999988764 2678999876 333
Q ss_pred CCcceeecccCc
Q 047897 94 PQFDLVVANIPY 105 (232)
Q Consensus 94 ~~~D~Vi~n~p~ 105 (232)
.+||+|+++-.+
T Consensus 92 ~~fD~v~~~~~l 103 (230)
T 3cc8_A 92 EQFDCVIFGDVL 103 (230)
T ss_dssp TCEEEEEEESCG
T ss_pred CccCEEEECChh
Confidence 379999986543
No 253
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.03 E-value=4.3e-10 Score=91.44 Aligned_cols=79 Identities=23% Similarity=0.367 Sum_probs=64.5
Q ss_pred CCCCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhhcC--C-CccEEEEEcCCCCCC---CCCccee
Q 047897 28 INPDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAADSG--F-HDRLNVISKDALKTE---FPQFDLV 99 (232)
Q Consensus 28 ~~~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~--~-~~~~~~~~~D~~~~~---~~~~D~V 99 (232)
..++.+|||||||+|.++..+++. ..+|+++|+|+.+++.|++++...+ + .++++++.+|+.+.. .++||+|
T Consensus 76 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (283)
T 2i7c_A 76 SKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVI 155 (283)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CCCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEE
Confidence 345679999999999999999984 5799999999999999999986432 1 268999999997642 3479999
Q ss_pred ecccCcc
Q 047897 100 VANIPYG 106 (232)
Q Consensus 100 i~n~p~~ 106 (232)
+++.+.+
T Consensus 156 i~d~~~~ 162 (283)
T 2i7c_A 156 IVDSSDP 162 (283)
T ss_dssp EEECCCT
T ss_pred EEcCCCC
Confidence 9987543
No 254
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.01 E-value=6.1e-10 Score=90.57 Aligned_cols=88 Identities=16% Similarity=0.143 Sum_probs=60.6
Q ss_pred HHHHHHhcCC--CCCCEEEEEcCCccHhHHHHHh-cCCeEEEEEcCHHHHHHHHHHHhhc-----------------CCC
Q 047897 19 LDSIVRKSSI--NPDDTVLEIGPGTGNLTLKLLE-VSKKVHAIEIDERMVEILNRRAADS-----------------GFH 78 (232)
Q Consensus 19 ~~~i~~~~~~--~~~~~vLDiG~G~G~~t~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~-----------------~~~ 78 (232)
++.+.+.+.. .++.+|||||||+|.++..++. .+.+|+|+|+|+.|++.|++++... +..
T Consensus 58 ~~~l~~~l~~~~~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~ 137 (289)
T 2g72_A 58 LRCLAQTFATGEVSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKG 137 (289)
T ss_dssp HHHHHHHHHTSCSCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSC
T ss_pred HHHHHHHhCCCCCCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcc
Confidence 3444444422 3678999999999995544444 4789999999999999999876421 100
Q ss_pred ------------ccEEEEEcCCCC-CCC-------CCcceeecccCcc
Q 047897 79 ------------DRLNVISKDALK-TEF-------PQFDLVVANIPYG 106 (232)
Q Consensus 79 ------------~~~~~~~~D~~~-~~~-------~~~D~Vi~n~p~~ 106 (232)
..++++.+|+.+ .++ .+||+|+++..++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~ 185 (289)
T 2g72_A 138 ECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLE 185 (289)
T ss_dssp CCHHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHH
T ss_pred cchhhhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhh
Confidence 025788889987 442 2499999986543
No 255
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.01 E-value=6.7e-10 Score=93.77 Aligned_cols=82 Identities=16% Similarity=0.159 Sum_probs=67.7
Q ss_pred CCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhhc---------------CCCccEEEEEcCCCCCC
Q 047897 30 PDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAADS---------------GFHDRLNVISKDALKTE 92 (232)
Q Consensus 30 ~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~---------------~~~~~~~~~~~D~~~~~ 92 (232)
++.+|||+|||+|.++..++.. +.+|+++|+|+.+++.+++|+..+ ++. +++++++|+.++.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~-~i~v~~~Da~~~~ 125 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEK-TIVINHDDANRLM 125 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSS-EEEEEESCHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCC-ceEEEcCcHHHHH
Confidence 6789999999999999999884 468999999999999999999988 763 5999999997653
Q ss_pred ---CCCcceeecccCcccchHHHH
Q 047897 93 ---FPQFDLVVANIPYGISSPLVA 113 (232)
Q Consensus 93 ---~~~~D~Vi~n~p~~~~~~~l~ 113 (232)
...||+|+.|+|+. ..+++.
T Consensus 126 ~~~~~~fD~I~lDP~~~-~~~~l~ 148 (378)
T 2dul_A 126 AERHRYFHFIDLDPFGS-PMEFLD 148 (378)
T ss_dssp HHSTTCEEEEEECCSSC-CHHHHH
T ss_pred HhccCCCCEEEeCCCCC-HHHHHH
Confidence 23799999887543 344443
No 256
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.00 E-value=3.1e-10 Score=84.79 Aligned_cols=77 Identities=17% Similarity=0.307 Sum_probs=61.2
Q ss_pred HHHHHhcC-CCCCCEEEEEcCCccHhHHHHHhc---CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC---
Q 047897 20 DSIVRKSS-INPDDTVLEIGPGTGNLTLKLLEV---SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE--- 92 (232)
Q Consensus 20 ~~i~~~~~-~~~~~~vLDiG~G~G~~t~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~--- 92 (232)
..+++... +.++.+|||+|||+|.++..+++. +.+++|+|+++ +++. .+++++.+|+.+.+
T Consensus 11 ~~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-----------~~~~~~~~d~~~~~~~~ 78 (180)
T 1ej0_A 11 DEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-----------VGVDFLQGDFRDELVMK 78 (180)
T ss_dssp HHHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-----------TTEEEEESCTTSHHHHH
T ss_pred HHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-----------CcEEEEEcccccchhhh
Confidence 34555544 567889999999999999999884 47999999999 6532 46999999998864
Q ss_pred -----C--CCcceeecccCcccc
Q 047897 93 -----F--PQFDLVVANIPYGIS 108 (232)
Q Consensus 93 -----~--~~~D~Vi~n~p~~~~ 108 (232)
. .+||+|++|.|++..
T Consensus 79 ~~~~~~~~~~~D~i~~~~~~~~~ 101 (180)
T 1ej0_A 79 ALLERVGDSKVQVVMSDMAPNMS 101 (180)
T ss_dssp HHHHHHTTCCEEEEEECCCCCCC
T ss_pred hhhccCCCCceeEEEECCCcccc
Confidence 3 479999999887654
No 257
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.99 E-value=3.5e-10 Score=90.95 Aligned_cols=75 Identities=11% Similarity=0.066 Sum_probs=62.8
Q ss_pred CCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhc--CC-CccEEEEEcCCCCCCCCCcceeecccC
Q 047897 29 NPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADS--GF-HDRLNVISKDALKTEFPQFDLVVANIP 104 (232)
Q Consensus 29 ~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~-~~~~~~~~~D~~~~~~~~~D~Vi~n~p 104 (232)
..+.+|||||||+|.++..+++.+.+|+++|+|+.+++.|++++... ++ .++++++.+|+.++. .+||+|+++.+
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~-~~fD~Ii~d~~ 148 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI-KKYDLIFCLQE 148 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC-CCEEEEEESSC
T ss_pred CCCCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH-hhCCEEEECCC
Confidence 35679999999999999999875589999999999999999876431 11 258999999999876 78999999864
No 258
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.98 E-value=2.7e-10 Score=89.96 Aligned_cols=56 Identities=23% Similarity=0.333 Sum_probs=46.3
Q ss_pred HHHHHHHHhcCCC-CCCEEEEEcCCccHhHHHHHhcC-CeEEEEEcCHHHHHHHHHHH
Q 047897 17 RVLDSIVRKSSIN-PDDTVLEIGPGTGNLTLKLLEVS-KKVHAIEIDERMVEILNRRA 72 (232)
Q Consensus 17 ~~~~~i~~~~~~~-~~~~vLDiG~G~G~~t~~l~~~~-~~v~~vD~~~~~~~~a~~~~ 72 (232)
.-++.+++.+.+. ++.+|||||||+|.++..+++.+ .+|+|+|+++.|++.++++.
T Consensus 23 ~kL~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~ 80 (232)
T 3opn_A 23 LKLEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSD 80 (232)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTC
T ss_pred HHHHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhC
Confidence 3456667777654 46699999999999999999976 59999999999999987764
No 259
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.95 E-value=1.6e-09 Score=83.19 Aligned_cols=74 Identities=16% Similarity=0.236 Sum_probs=57.5
Q ss_pred HHHhcC-CCCCCEEEEEcCCccHhHHHHHhc----CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC----
Q 047897 22 IVRKSS-INPDDTVLEIGPGTGNLTLKLLEV----SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE---- 92 (232)
Q Consensus 22 i~~~~~-~~~~~~vLDiG~G~G~~t~~l~~~----~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~---- 92 (232)
+.+... +.++.+|||+|||+|.++..+++. ..+|+|+|+++.. .. ++++++++|+.+.+
T Consensus 13 ~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~-~~v~~~~~d~~~~~~~~~ 80 (201)
T 2plw_A 13 LDNKYLFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PI-PNVYFIQGEIGKDNMNNI 80 (201)
T ss_dssp HHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CC-TTCEEEECCTTTTSSCCC
T ss_pred HHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CC-CCceEEEccccchhhhhh
Confidence 444443 467889999999999999999983 4799999999831 12 46899999998875
Q ss_pred ---------------------C--CCcceeecccCccc
Q 047897 93 ---------------------F--PQFDLVVANIPYGI 107 (232)
Q Consensus 93 ---------------------~--~~~D~Vi~n~p~~~ 107 (232)
+ .+||+|+++.+.++
T Consensus 81 ~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~ 118 (201)
T 2plw_A 81 KNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPC 118 (201)
T ss_dssp -----------CHHHHHHHHHHTTCCEEEEEECCCCCC
T ss_pred ccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCC
Confidence 2 37999999876554
No 260
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.94 E-value=4.3e-10 Score=92.35 Aligned_cols=80 Identities=18% Similarity=0.282 Sum_probs=59.1
Q ss_pred HHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEc----CHHHHHHHHHHHhhcCCCccEEEEEc-CCCCCCCCCcc
Q 047897 23 VRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEI----DERMVEILNRRAADSGFHDRLNVISK-DALKTEFPQFD 97 (232)
Q Consensus 23 ~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~----~~~~~~~a~~~~~~~~~~~~~~~~~~-D~~~~~~~~~D 97 (232)
.+...+.++.+|||+|||+|.++..+++. .+|+|+|+ ++.+++.+. ....+. +++.++.+ |+.+++.++||
T Consensus 75 ~~~~~~~~g~~VLDlGcG~G~~s~~la~~-~~V~gvD~~~~~~~~~~~~~~--~~~~~~-~~v~~~~~~D~~~l~~~~fD 150 (305)
T 2p41_A 75 VERNLVTPEGKVVDLGCGRGGWSYYCGGL-KNVREVKGLTKGGPGHEEPIP--MSTYGW-NLVRLQSGVDVFFIPPERCD 150 (305)
T ss_dssp HHTTSSCCCEEEEEETCTTSHHHHHHHTS-TTEEEEEEECCCSTTSCCCCC--CCSTTG-GGEEEECSCCTTTSCCCCCS
T ss_pred HHcCCCCCCCEEEEEcCCCCHHHHHHHhc-CCEEEEeccccCchhHHHHHH--hhhcCC-CCeEEEeccccccCCcCCCC
Confidence 44433467889999999999999999987 68999999 554332111 111121 57999999 99988777999
Q ss_pred eeecccCcc
Q 047897 98 LVVANIPYG 106 (232)
Q Consensus 98 ~Vi~n~p~~ 106 (232)
+|++|.+.+
T Consensus 151 ~V~sd~~~~ 159 (305)
T 2p41_A 151 TLLCDIGES 159 (305)
T ss_dssp EEEECCCCC
T ss_pred EEEECCccc
Confidence 999998754
No 261
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.93 E-value=2.8e-09 Score=86.10 Aligned_cols=92 Identities=16% Similarity=0.277 Sum_probs=63.3
Q ss_pred cccCCHHHHHHHHHhc-CCCCCCEEEEEcCCccH----hHHHHHhc------CCeEEEEEcCHHHHHHHHHHHhh-----
Q 047897 11 HILTNQRVLDSIVRKS-SINPDDTVLEIGPGTGN----LTLKLLEV------SKKVHAIEIDERMVEILNRRAAD----- 74 (232)
Q Consensus 11 ~fl~~~~~~~~i~~~~-~~~~~~~vLDiG~G~G~----~t~~l~~~------~~~v~~vD~~~~~~~~a~~~~~~----- 74 (232)
.|+.|+...+.+.+.+ +-.++.+|+|+|||+|. ++..+++. +.+|+|+|+|+.+++.|++....
T Consensus 85 ~FfRd~~~f~~l~~~llp~~~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~ 164 (274)
T 1af7_A 85 AFFREAHHFPILAEHARRRHGEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELK 164 (274)
T ss_dssp CTTTTTTHHHHHHHHHHHSCSCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGT
T ss_pred cccCChHHHHHHHHHccCCCCCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhh
Confidence 3555555554444322 11235689999999998 55556552 35899999999999999987510
Q ss_pred ------------------cC---C----CccEEEEEcCCCCCCC---CCcceeecc
Q 047897 75 ------------------SG---F----HDRLNVISKDALKTEF---PQFDLVVAN 102 (232)
Q Consensus 75 ------------------~~---~----~~~~~~~~~D~~~~~~---~~~D~Vi~n 102 (232)
.| + ..++.|.++|+.+.++ ++||+|+|.
T Consensus 165 ~~~~~~~~~~f~~~~~~~~~~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~cr 220 (274)
T 1af7_A 165 TLSPQQLQRYFMRGTGPHEGLVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCR 220 (274)
T ss_dssp TSCHHHHHHHEEECCTTSCSEEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEEC
T ss_pred cCCHHHHHHHhhccccCCCCceeechhhcccCeEEecccCCCCCCcCCCeeEEEEC
Confidence 00 0 0269999999998544 479999983
No 262
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.92 E-value=9.9e-09 Score=85.96 Aligned_cols=91 Identities=14% Similarity=0.210 Sum_probs=70.6
Q ss_pred HHHHHHhcCCCCCCEEEEEcCCccHhHHHHHh--cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCCCc
Q 047897 19 LDSIVRKSSINPDDTVLEIGPGTGNLTLKLLE--VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFPQF 96 (232)
Q Consensus 19 ~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 96 (232)
...+++..+.....+|+|||||+|.++..+++ +..+++..|. |.+++.++++....+ .+|++++.+|+.+.+.+.+
T Consensus 168 ~~~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~-~~rv~~~~gD~~~~~~~~~ 245 (353)
T 4a6d_A 168 GRSVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQE-EEQIDFQEGDFFKDPLPEA 245 (353)
T ss_dssp HHHHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC---CCSEEEEESCTTTSCCCCC
T ss_pred HHHHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcc-cCceeeecCccccCCCCCc
Confidence 34555666777788999999999999999998 5678888887 889999999887555 3799999999998777788
Q ss_pred ceeec-ccCcccchHH
Q 047897 97 DLVVA-NIPYGISSPL 111 (232)
Q Consensus 97 D~Vi~-n~p~~~~~~~ 111 (232)
|+++. ++-.++..+.
T Consensus 246 D~~~~~~vlh~~~d~~ 261 (353)
T 4a6d_A 246 DLYILARVLHDWADGK 261 (353)
T ss_dssp SEEEEESSGGGSCHHH
T ss_pred eEEEeeeecccCCHHH
Confidence 98776 4444455443
No 263
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.91 E-value=8.1e-10 Score=90.05 Aligned_cols=77 Identities=13% Similarity=0.257 Sum_probs=55.2
Q ss_pred CCCCEEEEEcCCccHhHHHHHh------cCCeE--EEEEcCHHHHHHHHHHHhhc-CCCccE--EEEEcCCCCCC-----
Q 047897 29 NPDDTVLEIGPGTGNLTLKLLE------VSKKV--HAIEIDERMVEILNRRAADS-GFHDRL--NVISKDALKTE----- 92 (232)
Q Consensus 29 ~~~~~vLDiG~G~G~~t~~l~~------~~~~v--~~vD~~~~~~~~a~~~~~~~-~~~~~~--~~~~~D~~~~~----- 92 (232)
.++.+|||||||+|.++..++. ....| +|+|+|++|++.+++++... +. +++ .+..+|+.+++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~ 129 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNL-ENVKFAWHKETSSEYQSRMLE 129 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSC-TTEEEEEECSCHHHHHHHHHT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCC-CcceEEEEecchhhhhhhhcc
Confidence 4677999999999987764432 23444 99999999999999998653 33 344 55677776542
Q ss_pred ---CCCcceeecccCcc
Q 047897 93 ---FPQFDLVVANIPYG 106 (232)
Q Consensus 93 ---~~~~D~Vi~n~p~~ 106 (232)
..+||+|+++...+
T Consensus 130 ~~~~~~fD~V~~~~~l~ 146 (292)
T 2aot_A 130 KKELQKWDFIHMIQMLY 146 (292)
T ss_dssp TTCCCCEEEEEEESCGG
T ss_pred ccCCCceeEEEEeeeee
Confidence 35799999875544
No 264
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.87 E-value=4.9e-09 Score=87.59 Aligned_cols=83 Identities=22% Similarity=0.310 Sum_probs=62.0
Q ss_pred HHHHHHhcCCCCCCEEEEEcCCccHhHHHHHh--cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCCCc
Q 047897 19 LDSIVRKSSINPDDTVLEIGPGTGNLTLKLLE--VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFPQF 96 (232)
Q Consensus 19 ~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 96 (232)
...+++.+++.++.+|||||||+|.++..+++ +..+++++|+ +.++. +++....+..++++++.+|+.+ +.++|
T Consensus 173 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~-~~p~~ 248 (348)
T 3lst_A 173 HLILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLR-EVPHA 248 (348)
T ss_dssp HHHHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTT-CCCCC
T ss_pred HHHHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCC-CCCCC
Confidence 34566777778888999999999999999998 4568899999 44544 4444334444689999999973 33389
Q ss_pred ceeecccCc
Q 047897 97 DLVVANIPY 105 (232)
Q Consensus 97 D~Vi~n~p~ 105 (232)
|+|+++-..
T Consensus 249 D~v~~~~vl 257 (348)
T 3lst_A 249 DVHVLKRIL 257 (348)
T ss_dssp SEEEEESCG
T ss_pred cEEEEehhc
Confidence 999886443
No 265
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.86 E-value=8.2e-09 Score=80.39 Aligned_cols=63 Identities=29% Similarity=0.399 Sum_probs=54.3
Q ss_pred CCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC--CcceeecccCc
Q 047897 31 DDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP--QFDLVVANIPY 105 (232)
Q Consensus 31 ~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~--~~D~Vi~n~p~ 105 (232)
+.+|||+|||+|.++..++.. +|+|+++.+++.++++ +++++.+|+.+.+.+ .||+|+++-.+
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~----~~vD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~v~~~~~l 112 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK----IGVEPSERMAEIARKR--------GVFVLKGTAENLPLKDESFDFALMVTTI 112 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC----EEEESCHHHHHHHHHT--------TCEEEECBTTBCCSCTTCEEEEEEESCG
T ss_pred CCcEEEeCCCCCHHHHHHHHH----hccCCCHHHHHHHHhc--------CCEEEEcccccCCCCCCCeeEEEEcchH
Confidence 779999999999999988765 9999999999999886 378999999887764 79999987543
No 266
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.85 E-value=2.8e-09 Score=88.66 Aligned_cols=76 Identities=21% Similarity=0.394 Sum_probs=62.6
Q ss_pred CCCEEEEEcCCccHhHHHHHhc-CCeEEEEEcCHHHHHHHHHHHhhcC---CC----ccEEEEEcCCCCCC------CCC
Q 047897 30 PDDTVLEIGPGTGNLTLKLLEV-SKKVHAIEIDERMVEILNRRAADSG---FH----DRLNVISKDALKTE------FPQ 95 (232)
Q Consensus 30 ~~~~vLDiG~G~G~~t~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~---~~----~~~~~~~~D~~~~~------~~~ 95 (232)
.+.+||+||||+|.++..+++. ..+|++||+|+.+++.|++++.... ++ ++++++.+|+.++. .+.
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~ 267 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 267 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCC
Confidence 4679999999999999999884 4789999999999999999986321 21 27999999998753 247
Q ss_pred cceeecccCc
Q 047897 96 FDLVVANIPY 105 (232)
Q Consensus 96 ~D~Vi~n~p~ 105 (232)
||+||.|+|.
T Consensus 268 fDvII~D~~d 277 (364)
T 2qfm_A 268 FDYVINDLTA 277 (364)
T ss_dssp EEEEEEECCS
T ss_pred ceEEEECCCC
Confidence 9999999865
No 267
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.84 E-value=2.5e-08 Score=80.08 Aligned_cols=92 Identities=13% Similarity=0.119 Sum_probs=62.7
Q ss_pred HHHHHHHHHhcCCC-CCCEEEEEcCCc--cHhHHHHHh---cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCC
Q 047897 16 QRVLDSIVRKSSIN-PDDTVLEIGPGT--GNLTLKLLE---VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDAL 89 (232)
Q Consensus 16 ~~~~~~i~~~~~~~-~~~~vLDiG~G~--G~~t~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~ 89 (232)
+..+.+.++.+... ....+||||||+ |..+..+++ ...+|+++|.|+.|++.+++++...+. .+++++++|+.
T Consensus 63 r~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~-~~~~~v~aD~~ 141 (277)
T 3giw_A 63 RDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPE-GRTAYVEADML 141 (277)
T ss_dssp HHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSS-SEEEEEECCTT
T ss_pred HHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCC-CcEEEEEeccc
Confidence 33444444444322 336899999997 444555544 578999999999999999999875432 57999999998
Q ss_pred CCC--------CCCcc-----eeecccCcccc
Q 047897 90 KTE--------FPQFD-----LVVANIPYGIS 108 (232)
Q Consensus 90 ~~~--------~~~~D-----~Vi~n~p~~~~ 108 (232)
+.+ ...|| .|++|-..|+.
T Consensus 142 ~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l 173 (277)
T 3giw_A 142 DPASILDAPELRDTLDLTRPVALTVIAIVHFV 173 (277)
T ss_dssp CHHHHHTCHHHHTTCCTTSCCEEEEESCGGGS
T ss_pred ChhhhhcccccccccCcCCcchHHhhhhHhcC
Confidence 752 12344 57777666544
No 268
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.84 E-value=2.8e-10 Score=97.30 Aligned_cols=87 Identities=14% Similarity=0.124 Sum_probs=63.9
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccE-EEEEcCCCCCC--
Q 047897 16 QRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRL-NVISKDALKTE-- 92 (232)
Q Consensus 16 ~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~~D~~~~~-- 92 (232)
...++.+++.+.+.++.+|||||||+|.++..+++.+.+|+|+|+|+.+++.|+++ +.+... .+..+|+.+++
T Consensus 93 ~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l~~~ 168 (416)
T 4e2x_A 93 AMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDVRRT 168 (416)
T ss_dssp HHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhcccC
Confidence 34566777778878889999999999999999999888999999999999999876 221111 12223333333
Q ss_pred CCCcceeecccCcc
Q 047897 93 FPQFDLVVANIPYG 106 (232)
Q Consensus 93 ~~~~D~Vi~n~p~~ 106 (232)
..+||+|+++-.++
T Consensus 169 ~~~fD~I~~~~vl~ 182 (416)
T 4e2x_A 169 EGPANVIYAANTLC 182 (416)
T ss_dssp HCCEEEEEEESCGG
T ss_pred CCCEEEEEECChHH
Confidence 24799999875543
No 269
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.81 E-value=1.8e-08 Score=77.45 Aligned_cols=72 Identities=18% Similarity=0.234 Sum_probs=57.5
Q ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc-CCeEEEEEcCHHHHHHHHHHHhhcCC--CccEEEEEcCCCC
Q 047897 15 NQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV-SKKVHAIEIDERMVEILNRRAADSGF--HDRLNVISKDALK 90 (232)
Q Consensus 15 ~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~~~D~~~ 90 (232)
++...+.+...+ .+..+|||+|| |+-|..+++. +.+|+++|.|+++.+.+++++...|+ .++++++.+|+.+
T Consensus 17 ~~~~~~~L~~~l--~~a~~VLEiGt--GySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~ 91 (202)
T 3cvo_A 17 PPAEAEALRMAY--EEAEVILEYGS--GGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGP 91 (202)
T ss_dssp CHHHHHHHHHHH--HHCSEEEEESC--SHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSS
T ss_pred CHHHHHHHHHHh--hCCCEEEEECc--hHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchh
Confidence 444444443333 45679999998 4777777774 68999999999999999999999987 6799999999765
No 270
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.78 E-value=1.2e-08 Score=73.44 Aligned_cols=80 Identities=19% Similarity=0.221 Sum_probs=62.6
Q ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCCcc-HhHHHHHh-cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC
Q 047897 15 NQRVLDSIVRKSSINPDDTVLEIGPGTG-NLTLKLLE-VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE 92 (232)
Q Consensus 15 ~~~~~~~i~~~~~~~~~~~vLDiG~G~G-~~t~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~ 92 (232)
+..+++.|.+... ++++|||||||+| ..+..|++ .+..|+++|+++..++ ++.+|+.+..
T Consensus 22 ~e~LaeYI~~~~~--~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~----------------~v~dDiF~P~ 83 (153)
T 2k4m_A 22 WNDLAVYIIRCSG--PGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG----------------IVRDDITSPR 83 (153)
T ss_dssp HHHHHHHHHHHSC--SSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT----------------EECCCSSSCC
T ss_pred HHHHHHHHHhcCC--CCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc----------------eEEccCCCCc
Confidence 4567777777663 5679999999999 59999997 8899999999986543 8889999876
Q ss_pred C---CCcceee-cccCcccchHHH
Q 047897 93 F---PQFDLVV-ANIPYGISSPLV 112 (232)
Q Consensus 93 ~---~~~D~Vi-~n~p~~~~~~~l 112 (232)
. ..+|+|. .|+|--...+++
T Consensus 84 ~~~Y~~~DLIYsirPP~El~~~i~ 107 (153)
T 2k4m_A 84 MEIYRGAALIYSIRPPAEIHSSLM 107 (153)
T ss_dssp HHHHTTEEEEEEESCCTTTHHHHH
T ss_pred ccccCCcCEEEEcCCCHHHHHHHH
Confidence 5 3799994 588865555443
No 271
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.77 E-value=1.2e-08 Score=85.93 Aligned_cols=77 Identities=13% Similarity=0.203 Sum_probs=61.5
Q ss_pred HHHHHhcC-CCCCCEEEEEcCCccHhHHHHHh--cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCCCc
Q 047897 20 DSIVRKSS-INPDDTVLEIGPGTGNLTLKLLE--VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFPQF 96 (232)
Q Consensus 20 ~~i~~~~~-~~~~~~vLDiG~G~G~~t~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 96 (232)
..+++.++ +.++.+|||||||+|.++..+++ ...+++++|+ +.+++.+++. ++++++.+|+.+ +.+.+
T Consensus 198 ~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~-~~~~~ 268 (372)
T 1fp1_D 198 KRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL-------SGIEHVGGDMFA-SVPQG 268 (372)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTT-CCCCE
T ss_pred HHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc-------CCCEEEeCCccc-CCCCC
Confidence 45556664 66778999999999999999998 3568899999 9998876641 469999999988 56669
Q ss_pred ceeecccCc
Q 047897 97 DLVVANIPY 105 (232)
Q Consensus 97 D~Vi~n~p~ 105 (232)
|+|+++...
T Consensus 269 D~v~~~~~l 277 (372)
T 1fp1_D 269 DAMILKAVC 277 (372)
T ss_dssp EEEEEESSG
T ss_pred CEEEEeccc
Confidence 999986543
No 272
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.77 E-value=1.1e-08 Score=85.51 Aligned_cols=70 Identities=20% Similarity=0.327 Sum_probs=57.3
Q ss_pred CCCCCCEEEEEcCCccHhHHHHHh--cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCCCcceeecccC
Q 047897 27 SINPDDTVLEIGPGTGNLTLKLLE--VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIP 104 (232)
Q Consensus 27 ~~~~~~~vLDiG~G~G~~t~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vi~n~p 104 (232)
++.++.+|||||||+|.++..+++ ++.+++++|+ +.+++.+++. ++++++.+|+.+ +.+.||+|+++..
T Consensus 185 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~-~~p~~D~v~~~~~ 255 (352)
T 1fp2_A 185 VFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS-------NNLTYVGGDMFT-SIPNADAVLLKYI 255 (352)
T ss_dssp HHTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB-------TTEEEEECCTTT-CCCCCSEEEEESC
T ss_pred ccccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC-------CCcEEEeccccC-CCCCccEEEeehh
Confidence 345678999999999999999998 3679999999 9998877651 359999999987 5567999998654
Q ss_pred c
Q 047897 105 Y 105 (232)
Q Consensus 105 ~ 105 (232)
.
T Consensus 256 l 256 (352)
T 1fp2_A 256 L 256 (352)
T ss_dssp G
T ss_pred h
Confidence 3
No 273
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.75 E-value=2.6e-08 Score=75.91 Aligned_cols=68 Identities=12% Similarity=0.228 Sum_probs=53.4
Q ss_pred CCCCCEEEEEcCCccHhHHHHHhc-C----------CeEEEEEcCHHHHHHHHHHHhhcCCCccEEEE-EcCCCCCC---
Q 047897 28 INPDDTVLEIGPGTGNLTLKLLEV-S----------KKVHAIEIDERMVEILNRRAADSGFHDRLNVI-SKDALKTE--- 92 (232)
Q Consensus 28 ~~~~~~vLDiG~G~G~~t~~l~~~-~----------~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~-~~D~~~~~--- 92 (232)
+.++.+|||+|||+|.++..+++. + .+|+|+|+++.. .. .+++++ .+|+.+.+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~-~~~~~~~~~d~~~~~~~~ 87 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PL-EGATFLCPADVTDPRTSQ 87 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CC-TTCEEECSCCTTSHHHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cC-CCCeEEEeccCCCHHHHH
Confidence 567899999999999999999984 3 789999999831 12 468899 99987643
Q ss_pred -------CCCcceeecccCccc
Q 047897 93 -------FPQFDLVVANIPYGI 107 (232)
Q Consensus 93 -------~~~~D~Vi~n~p~~~ 107 (232)
..+||+|+++.+.+.
T Consensus 88 ~~~~~~~~~~fD~V~~~~~~~~ 109 (196)
T 2nyu_A 88 RILEVLPGRRADVILSDMAPNA 109 (196)
T ss_dssp HHHHHSGGGCEEEEEECCCCCC
T ss_pred HHHHhcCCCCCcEEEeCCCCCC
Confidence 237999999875443
No 274
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.75 E-value=2.4e-08 Score=84.01 Aligned_cols=77 Identities=13% Similarity=0.225 Sum_probs=60.0
Q ss_pred HHHHHhcC-CCCCCEEEEEcCCccHhHHHHHh--cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCCCc
Q 047897 20 DSIVRKSS-INPDDTVLEIGPGTGNLTLKLLE--VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFPQF 96 (232)
Q Consensus 20 ~~i~~~~~-~~~~~~vLDiG~G~G~~t~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 96 (232)
..+++.++ ..++.+|||||||+|.++..+++ +..+++++|+ +.+++.++++ ++++++.+|+.+ +.+.-
T Consensus 192 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~-~~p~~ 262 (368)
T 3reo_A 192 KKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF-------SGVEHLGGDMFD-GVPKG 262 (368)
T ss_dssp HHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTT-CCCCC
T ss_pred HHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc-------CCCEEEecCCCC-CCCCC
Confidence 44555555 56778999999999999999998 5678999999 8888776532 579999999987 55544
Q ss_pred ceeecccCc
Q 047897 97 DLVVANIPY 105 (232)
Q Consensus 97 D~Vi~n~p~ 105 (232)
|+|++....
T Consensus 263 D~v~~~~vl 271 (368)
T 3reo_A 263 DAIFIKWIC 271 (368)
T ss_dssp SEEEEESCG
T ss_pred CEEEEechh
Confidence 998876543
No 275
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.74 E-value=3.2e-08 Score=83.18 Aligned_cols=77 Identities=13% Similarity=0.200 Sum_probs=60.8
Q ss_pred HHHHHHhcC-CCCCCEEEEEcCCccHhHHHHHh--cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCCC
Q 047897 19 LDSIVRKSS-INPDDTVLEIGPGTGNLTLKLLE--VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFPQ 95 (232)
Q Consensus 19 ~~~i~~~~~-~~~~~~vLDiG~G~G~~t~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~~ 95 (232)
...+++.++ ..+..+|||||||+|.++..+++ +..+++++|+ +.+++.+++. ++++++.+|+.+ +.+.
T Consensus 189 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~D~~~-~~p~ 259 (364)
T 3p9c_A 189 TKKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF-------PGVTHVGGDMFK-EVPS 259 (364)
T ss_dssp HHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTT-CCCC
T ss_pred HHHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc-------CCeEEEeCCcCC-CCCC
Confidence 445666665 66778999999999999999998 5678999999 8888766532 579999999987 5554
Q ss_pred cceeecccC
Q 047897 96 FDLVVANIP 104 (232)
Q Consensus 96 ~D~Vi~n~p 104 (232)
-|+|++.-.
T Consensus 260 ~D~v~~~~v 268 (364)
T 3p9c_A 260 GDTILMKWI 268 (364)
T ss_dssp CSEEEEESC
T ss_pred CCEEEehHH
Confidence 498887543
No 276
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.69 E-value=2.5e-08 Score=88.84 Aligned_cols=72 Identities=19% Similarity=0.293 Sum_probs=59.8
Q ss_pred CCEEEEEcCCccHhHHHHHh----cCC--eEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC-Ccceeeccc
Q 047897 31 DDTVLEIGPGTGNLTLKLLE----VSK--KVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP-QFDLVVANI 103 (232)
Q Consensus 31 ~~~vLDiG~G~G~~t~~l~~----~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~-~~D~Vi~n~ 103 (232)
+..|||+|||+|-+....++ .+. +|+|||.++ ++..+++....+++.++++++++|++++..+ ++|+||+-.
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~LPEKVDIIVSEw 436 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSEL 436 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCCCSSCEEEEECCC
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceeccCCcccCEEEEEc
Confidence 45799999999999555554 222 689999997 6778888998889989999999999998876 899999853
No 277
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.66 E-value=1.1e-07 Score=77.78 Aligned_cols=61 Identities=21% Similarity=0.253 Sum_probs=55.2
Q ss_pred CCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhc
Q 047897 14 TNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADS 75 (232)
Q Consensus 14 ~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~ 75 (232)
.+..+++.+++... .+++.|||++||+|..+.+++..+.+++|+|+++.+++.|++++...
T Consensus 220 ~p~~l~~~~i~~~~-~~~~~vlD~f~GsGt~~~~a~~~g~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 220 FPLELAERLVRMFS-FVGDVVLDPFAGTGTTLIAAARWGRRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp SCHHHHHHHHHHHC-CTTCEEEETTCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHHh
Confidence 35688999998876 67899999999999999999999999999999999999999999765
No 278
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.65 E-value=2.4e-08 Score=83.61 Aligned_cols=77 Identities=21% Similarity=0.335 Sum_probs=60.1
Q ss_pred HHHHhc--CCCCCCEEEEEcCCccHhHHHHHh--cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCCCc
Q 047897 21 SIVRKS--SINPDDTVLEIGPGTGNLTLKLLE--VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFPQF 96 (232)
Q Consensus 21 ~i~~~~--~~~~~~~vLDiG~G~G~~t~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 96 (232)
.+++.. ++.++.+|||||||+|.++..+++ ...+++++|+ +.+++.+++ . ++++++.+|+.+ +.+.+
T Consensus 182 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~-~~~~~ 252 (358)
T 1zg3_A 182 LVLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG------N-ENLNFVGGDMFK-SIPSA 252 (358)
T ss_dssp HHHHHTHHHHHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC------C-SSEEEEECCTTT-CCCCC
T ss_pred HHHHhcchhccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc------C-CCcEEEeCccCC-CCCCc
Confidence 344444 344668999999999999999998 3568999999 788876654 1 469999999988 66689
Q ss_pred ceeecccCcc
Q 047897 97 DLVVANIPYG 106 (232)
Q Consensus 97 D~Vi~n~p~~ 106 (232)
|+|+++..++
T Consensus 253 D~v~~~~vlh 262 (358)
T 1zg3_A 253 DAVLLKWVLH 262 (358)
T ss_dssp SEEEEESCGG
T ss_pred eEEEEccccc
Confidence 9999876544
No 279
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.64 E-value=2.6e-08 Score=77.17 Aligned_cols=60 Identities=17% Similarity=0.186 Sum_probs=49.3
Q ss_pred CCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC--CcceeecccCc
Q 047897 28 INPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP--QFDLVVANIPY 105 (232)
Q Consensus 28 ~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~--~~D~Vi~n~p~ 105 (232)
..++.+|||+|||+|.++..+. .+++|+|+++. +++++.+|+.+.+.+ +||+|+++..+
T Consensus 65 ~~~~~~vLDiG~G~G~~~~~l~---~~v~~~D~s~~----------------~~~~~~~d~~~~~~~~~~fD~v~~~~~l 125 (215)
T 2zfu_A 65 RPASLVVADFGCGDCRLASSIR---NPVHCFDLASL----------------DPRVTVCDMAQVPLEDESVDVAVFCLSL 125 (215)
T ss_dssp SCTTSCEEEETCTTCHHHHHCC---SCEEEEESSCS----------------STTEEESCTTSCSCCTTCEEEEEEESCC
T ss_pred cCCCCeEEEECCcCCHHHHHhh---ccEEEEeCCCC----------------CceEEEeccccCCCCCCCEeEEEEehhc
Confidence 3567899999999999998873 79999999987 356889999887654 79999987665
Q ss_pred c
Q 047897 106 G 106 (232)
Q Consensus 106 ~ 106 (232)
+
T Consensus 126 ~ 126 (215)
T 2zfu_A 126 M 126 (215)
T ss_dssp C
T ss_pred c
Confidence 4
No 280
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.60 E-value=5.3e-08 Score=81.37 Aligned_cols=92 Identities=21% Similarity=0.242 Sum_probs=75.4
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhhcCCC-----ccEEEEEcCCC
Q 047897 17 RVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAADSGFH-----DRLNVISKDAL 89 (232)
Q Consensus 17 ~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~-----~~~~~~~~D~~ 89 (232)
......+..+++++|++|||+++|+|+-|..+++. ...|+++|+++.-++.+++++...+.. .++.+...|+.
T Consensus 135 ~aS~l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~ 214 (359)
T 4fzv_A 135 AASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGR 214 (359)
T ss_dssp GGGHHHHHHHCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGG
T ss_pred HHHHHHHHHhCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchh
Confidence 33344456678899999999999999999999884 357999999999999999999876542 47899999998
Q ss_pred CCC---CCCcceeecccCcccc
Q 047897 90 KTE---FPQFDLVVANIPYGIS 108 (232)
Q Consensus 90 ~~~---~~~~D~Vi~n~p~~~~ 108 (232)
.++ ...||.|+.+.|...+
T Consensus 215 ~~~~~~~~~fD~VLlDaPCSg~ 236 (359)
T 4fzv_A 215 KWGELEGDTYDRVLVDVPCTTD 236 (359)
T ss_dssp GHHHHSTTCEEEEEEECCCCCH
T ss_pred hcchhccccCCEEEECCccCCC
Confidence 763 3479999999998754
No 281
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.56 E-value=7.1e-08 Score=79.10 Aligned_cols=91 Identities=16% Similarity=0.233 Sum_probs=74.0
Q ss_pred ccCCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhc---CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCC
Q 047897 12 ILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV---SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDA 88 (232)
Q Consensus 12 fl~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~ 88 (232)
|.+-|-+++++++.+.+.+++.++|..||.|+.|..+++. ..+|+|+|.|+.+++.++ ++ . .++++++++++
T Consensus 39 ~~H~pVLl~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL--~--~~Rv~lv~~nF 113 (347)
T 3tka_A 39 YKHTTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI--D--DPRFSIIHGPF 113 (347)
T ss_dssp ---CCTTTHHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC--C--CTTEEEEESCG
T ss_pred CCcccccHHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh--c--CCcEEEEeCCH
Confidence 4456788999999999999999999999999999999983 479999999999999984 44 1 26899999999
Q ss_pred CCCC-------CC-CcceeecccCccc
Q 047897 89 LKTE-------FP-QFDLVVANIPYGI 107 (232)
Q Consensus 89 ~~~~-------~~-~~D~Vi~n~p~~~ 107 (232)
.++. .. ++|.|+.|+.+..
T Consensus 114 ~~l~~~L~~~g~~~~vDgILfDLGVSS 140 (347)
T 3tka_A 114 SALGEYVAERDLIGKIDGILLDLGVSS 140 (347)
T ss_dssp GGHHHHHHHTTCTTCEEEEEEECSCCH
T ss_pred HHHHHHHHhcCCCCcccEEEECCccCH
Confidence 8762 12 5899999987653
No 282
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.52 E-value=1.2e-07 Score=79.83 Aligned_cols=78 Identities=26% Similarity=0.375 Sum_probs=59.5
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEcCC------ccHhHHHHHh---cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEc
Q 047897 16 QRVLDSIVRKSSINPDDTVLEIGPG------TGNLTLKLLE---VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISK 86 (232)
Q Consensus 16 ~~~~~~i~~~~~~~~~~~vLDiG~G------~G~~t~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~ 86 (232)
....+++++.+. .++.+||||||| +|..+..+++ ...+|+|+|+++.+. . . .++++++++
T Consensus 203 ~~~Ye~lL~~l~-~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~------~--~--~~rI~fv~G 271 (419)
T 3sso_A 203 TPHYDRHFRDYR-NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH------V--D--ELRIRTIQG 271 (419)
T ss_dssp HHHHHHHHGGGT-TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG------G--C--BTTEEEEEC
T ss_pred HHHHHHHHHhhc-CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh------h--c--CCCcEEEEe
Confidence 456777776664 346799999999 7777777775 368999999999972 1 1 268999999
Q ss_pred CCCCCCC--------CCcceeecccC
Q 047897 87 DALKTEF--------PQFDLVVANIP 104 (232)
Q Consensus 87 D~~~~~~--------~~~D~Vi~n~p 104 (232)
|+.++++ .+||+|+++..
T Consensus 272 Da~dlpf~~~l~~~d~sFDlVisdgs 297 (419)
T 3sso_A 272 DQNDAEFLDRIARRYGPFDIVIDDGS 297 (419)
T ss_dssp CTTCHHHHHHHHHHHCCEEEEEECSC
T ss_pred cccccchhhhhhcccCCccEEEECCc
Confidence 9988643 47999999754
No 283
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.48 E-value=2.6e-07 Score=76.95 Aligned_cols=83 Identities=16% Similarity=0.257 Sum_probs=62.5
Q ss_pred CCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC--CcceeecccCc
Q 047897 28 INPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP--QFDLVVANIPY 105 (232)
Q Consensus 28 ~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~--~~D~Vi~n~p~ 105 (232)
+.+|.+|||+||++|+.|..+++.+.+|+|||..+ |-..+ ... ++++++++|+..+..+ ++|+|+|++..
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~-l~~~l----~~~---~~V~~~~~d~~~~~~~~~~~D~vvsDm~~ 280 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGP-MAQSL----MDT---GQVTWLREDGFKFRPTRSNISWMVCDMVE 280 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTTCEEEEECSSC-CCHHH----HTT---TCEEEECSCTTTCCCCSSCEEEEEECCSS
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhh-cChhh----ccC---CCeEEEeCccccccCCCCCcCEEEEcCCC
Confidence 46899999999999999999999999999999754 22221 111 6799999999987654 79999999866
Q ss_pred ccc--hHHHHHHhcC
Q 047897 106 GIS--SPLVAKLVYG 118 (232)
Q Consensus 106 ~~~--~~~l~~~~~~ 118 (232)
+.. ...+..++..
T Consensus 281 ~p~~~~~l~~~wl~~ 295 (375)
T 4auk_A 281 KPAKVAALMAQWLVN 295 (375)
T ss_dssp CHHHHHHHHHHHHHT
T ss_pred ChHHhHHHHHHHHhc
Confidence 554 2334444443
No 284
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.45 E-value=1.4e-07 Score=84.31 Aligned_cols=73 Identities=19% Similarity=0.284 Sum_probs=56.7
Q ss_pred CCEEEEEcCCccHhHHHHHh---c------------CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCC--
Q 047897 31 DDTVLEIGPGTGNLTLKLLE---V------------SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEF-- 93 (232)
Q Consensus 31 ~~~vLDiG~G~G~~t~~l~~---~------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~-- 93 (232)
+..|||+|||+|.++...+. . ..+|+|||.++.++..++.... +++.++++++++|+.++..
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccccc
Confidence 45799999999999754322 1 2399999999987766666554 6777789999999999865
Q ss_pred -----CCcceeecccC
Q 047897 94 -----PQFDLVVANIP 104 (232)
Q Consensus 94 -----~~~D~Vi~n~p 104 (232)
++.|+||+-+.
T Consensus 489 ~~~~~ekVDIIVSElm 504 (745)
T 3ua3_A 489 KDRGFEQPDIIVSELL 504 (745)
T ss_dssp HHTTCCCCSEEEECCC
T ss_pred ccCCCCcccEEEEecc
Confidence 48999999654
No 285
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.42 E-value=2.6e-07 Score=75.07 Aligned_cols=65 Identities=11% Similarity=0.229 Sum_probs=49.5
Q ss_pred cCCCCCCEEEEEcC------CccHhHHHHHh---cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEE-EEcCCCCCCCC-
Q 047897 26 SSINPDDTVLEIGP------GTGNLTLKLLE---VSKKVHAIEIDERMVEILNRRAADSGFHDRLNV-ISKDALKTEFP- 94 (232)
Q Consensus 26 ~~~~~~~~vLDiG~------G~G~~t~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~-~~~D~~~~~~~- 94 (232)
+.+.++.+|||+|| |+|. ..+++ ...+|+|+|+++. . +++++ +++|+.+.+.+
T Consensus 59 l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v------~~v~~~i~gD~~~~~~~~ 122 (290)
T 2xyq_A 59 LAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------V------SDADSTLIGDCATVHTAN 122 (290)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------B------CSSSEEEESCGGGCCCSS
T ss_pred cCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------C------CCCEEEEECccccCCccC
Confidence 35678899999999 4476 33333 2579999999997 1 35788 99999987654
Q ss_pred CcceeecccCcc
Q 047897 95 QFDLVVANIPYG 106 (232)
Q Consensus 95 ~~D~Vi~n~p~~ 106 (232)
+||+|++|++.+
T Consensus 123 ~fD~Vvsn~~~~ 134 (290)
T 2xyq_A 123 KWDLIISDMYDP 134 (290)
T ss_dssp CEEEEEECCCCC
T ss_pred cccEEEEcCCcc
Confidence 799999997533
No 286
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=98.38 E-value=1e-06 Score=70.49 Aligned_cols=62 Identities=21% Similarity=0.335 Sum_probs=54.4
Q ss_pred CCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcC
Q 047897 14 TNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSG 76 (232)
Q Consensus 14 ~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~ 76 (232)
.+..+++.+++... .+++.|||..||+|..+.++.+.+.+++|+|+++..++.+++++...+
T Consensus 197 ~p~~l~~~~i~~~~-~~~~~vlD~f~GsGtt~~~a~~~gr~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 197 KPRDLIERIIRASS-NPNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp CCHHHHHHHHHHHC-CTTCEEEESSCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC--
T ss_pred CCHHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcc
Confidence 35678899988775 688999999999999999999999999999999999999999997644
No 287
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.38 E-value=1.7e-06 Score=70.09 Aligned_cols=77 Identities=19% Similarity=0.348 Sum_probs=63.7
Q ss_pred CCCCEEEEEcCCccHhHHHHHh--cCCeEEEEEcCHHHHHHHHHHHhhc--C--CCccEEEEEcCCCCCCC---CCccee
Q 047897 29 NPDDTVLEIGPGTGNLTLKLLE--VSKKVHAIEIDERMVEILNRRAADS--G--FHDRLNVISKDALKTEF---PQFDLV 99 (232)
Q Consensus 29 ~~~~~vLDiG~G~G~~t~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~--~--~~~~~~~~~~D~~~~~~---~~~D~V 99 (232)
....+||=||.|.|..++++++ ...+|+.||+|+.+++.+++.+... + .++|++++.+|+..+-. ..||+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 3457899999999999999998 3579999999999999999987532 1 13799999999988643 379999
Q ss_pred ecccCc
Q 047897 100 VANIPY 105 (232)
Q Consensus 100 i~n~p~ 105 (232)
+.+++-
T Consensus 162 i~D~~d 167 (294)
T 3o4f_A 162 ISDCTD 167 (294)
T ss_dssp EESCCC
T ss_pred EEeCCC
Confidence 998753
No 288
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.20 E-value=1.4e-07 Score=75.68 Aligned_cols=75 Identities=13% Similarity=0.176 Sum_probs=64.6
Q ss_pred CCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCC------CCCCcceeecccC
Q 047897 31 DDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKT------EFPQFDLVVANIP 104 (232)
Q Consensus 31 ~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~------~~~~~D~Vi~n~p 104 (232)
+..+||+-+|+|.++..+++.+.+++.+|.++..++..++|+.. .+++++++.|+... +.+.||+|+.+||
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~~d~~vfvE~~~~a~~~L~~Nl~~---~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPP 168 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHF---NKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPS 168 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCTTSEEEEECCSHHHHHHHTTSCCT---TSCEEEECSCHHHHHHHHCSCTTSCEEEEECCC
T ss_pred CCCceeEeCCcHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHhCc---CCcEEEEeCcHHHHHHHhcCCCCCccEEEECCC
Confidence 45689999999999999999889999999999999999999975 26799999997652 2236999999999
Q ss_pred cccc
Q 047897 105 YGIS 108 (232)
Q Consensus 105 ~~~~ 108 (232)
|...
T Consensus 169 Ye~k 172 (283)
T 2oo3_A 169 YERK 172 (283)
T ss_dssp CCST
T ss_pred CCCC
Confidence 9953
No 289
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.08 E-value=1.5e-05 Score=61.93 Aligned_cols=88 Identities=16% Similarity=0.219 Sum_probs=62.3
Q ss_pred HHHHHHhcCCCCCCEEEEEcCCccHhHHHHHh--cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEc-CCCCCCCCC
Q 047897 19 LDSIVRKSSINPDDTVLEIGPGTGNLTLKLLE--VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISK-DALKTEFPQ 95 (232)
Q Consensus 19 ~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~-D~~~~~~~~ 95 (232)
+..|.+...+.++.+|+|+||++|..+..++. ...+|+|+|+-..-.+. -......|+ +.++|..+ |+...+..+
T Consensus 67 L~ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~-P~~~~s~gw-n~v~fk~gvDv~~~~~~~ 144 (267)
T 3p8z_A 67 LQWFVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEE-PVPMSTYGW-NIVKLMSGKDVFYLPPEK 144 (267)
T ss_dssp HHHHHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCC-CCCCCCTTT-TSEEEECSCCGGGCCCCC
T ss_pred HHHHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccC-cchhhhcCc-CceEEEeccceeecCCcc
Confidence 34555666678899999999999999997777 34689999987542210 001123455 47999999 987776678
Q ss_pred cceeecccCcccc
Q 047897 96 FDLVVANIPYGIS 108 (232)
Q Consensus 96 ~D~Vi~n~p~~~~ 108 (232)
+|.|+|++-=...
T Consensus 145 ~DtllcDIgeSs~ 157 (267)
T 3p8z_A 145 CDTLLCDIGESSP 157 (267)
T ss_dssp CSEEEECCCCCCS
T ss_pred ccEEEEecCCCCC
Confidence 9999999733333
No 290
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.06 E-value=7e-06 Score=65.74 Aligned_cols=85 Identities=16% Similarity=0.208 Sum_probs=59.4
Q ss_pred HHHHHHhcCCCCCCEEEEEcCCccHhHHHHHh--cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEc-CCCCCCCCC
Q 047897 19 LDSIVRKSSINPDDTVLEIGPGTGNLTLKLLE--VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISK-DALKTEFPQ 95 (232)
Q Consensus 19 ~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~-D~~~~~~~~ 95 (232)
+..|.+...+.++.+|||+||++|..+..++. ...+|+|+|+-..-.+.= ......+. .-+.++.+ |+..++..+
T Consensus 83 L~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P-~~~~ql~w-~lV~~~~~~Dv~~l~~~~ 160 (321)
T 3lkz_A 83 LRWLVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEP-QLVQSYGW-NIVTMKSGVDVFYRPSEC 160 (321)
T ss_dssp HHHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCC-CCCCBTTG-GGEEEECSCCTTSSCCCC
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCc-chhhhcCC-cceEEEeccCHhhCCCCC
Confidence 34555666678889999999999999997776 346799999876411000 00012222 34888888 987777678
Q ss_pred cceeecccCc
Q 047897 96 FDLVVANIPY 105 (232)
Q Consensus 96 ~D~Vi~n~p~ 105 (232)
+|.|+|++--
T Consensus 161 ~D~ivcDige 170 (321)
T 3lkz_A 161 CDTLLCDIGE 170 (321)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEEECcc
Confidence 9999999863
No 291
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.01 E-value=1.6e-06 Score=64.84 Aligned_cols=60 Identities=13% Similarity=0.161 Sum_probs=49.1
Q ss_pred cCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCC---C--Ccceee
Q 047897 26 SSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEF---P--QFDLVV 100 (232)
Q Consensus 26 ~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~---~--~~D~Vi 100 (232)
+++.+|++|||+|||. +++|+++.|++.|+++.. .+++++.+|+.+++. + +||+|+
T Consensus 8 ~g~~~g~~vL~~~~g~--------------v~vD~s~~ml~~a~~~~~-----~~~~~~~~d~~~~~~~~~~~~~fD~V~ 68 (176)
T 2ld4_A 8 FGISAGQFVAVVWDKS--------------SPVEALKGLVDKLQALTG-----NEGRVSVENIKQLLQSAHKESSFDIIL 68 (176)
T ss_dssp TTCCTTSEEEEEECTT--------------SCHHHHHHHHHHHHHHTT-----TTSEEEEEEGGGGGGGCCCSSCEEEEE
T ss_pred cCCCCCCEEEEecCCc--------------eeeeCCHHHHHHHHHhcc-----cCcEEEEechhcCccccCCCCCEeEEE
Confidence 4567899999999996 239999999999999864 248899999988765 3 799999
Q ss_pred cccC
Q 047897 101 ANIP 104 (232)
Q Consensus 101 ~n~p 104 (232)
++..
T Consensus 69 ~~~~ 72 (176)
T 2ld4_A 69 SGLV 72 (176)
T ss_dssp ECCS
T ss_pred ECCh
Confidence 8654
No 292
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.98 E-value=1.6e-05 Score=66.98 Aligned_cols=70 Identities=19% Similarity=0.174 Sum_probs=58.3
Q ss_pred CEEEEEcCCccHhHHHHHhcCCe-EEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC----------CCCcceee
Q 047897 32 DTVLEIGPGTGNLTLKLLEVSKK-VHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE----------FPQFDLVV 100 (232)
Q Consensus 32 ~~vLDiG~G~G~~t~~l~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~----------~~~~D~Vi 100 (232)
.+++|+.||.|.++..+.+.+.+ |.++|+|+.+++..+.|+ ++..++++|+.++. ...+|+|+
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~------~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ 76 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINF------PRSLHVQEDVSLLNAEIIKGFFKNDMPIDGII 76 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHC------TTSEEECCCGGGCCHHHHHHHHCSCCCCCEEE
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhC------CCCceEecChhhcCHHHHHhhcccCCCeeEEE
Confidence 47999999999999999886665 569999999999998886 35678899998873 24789999
Q ss_pred cccCccc
Q 047897 101 ANIPYGI 107 (232)
Q Consensus 101 ~n~p~~~ 107 (232)
+.+|+..
T Consensus 77 ggpPCQ~ 83 (376)
T 3g7u_A 77 GGPPCQG 83 (376)
T ss_dssp ECCCCCT
T ss_pred ecCCCCC
Confidence 9999653
No 293
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.95 E-value=8e-06 Score=65.10 Aligned_cols=83 Identities=12% Similarity=0.121 Sum_probs=52.0
Q ss_pred HHHHhcCCCCCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCC--CCCCCCCc
Q 047897 21 SIVRKSSINPDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDA--LKTEFPQF 96 (232)
Q Consensus 21 ~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~--~~~~~~~~ 96 (232)
++.+...+.++.+|||+|||+|..+..++.. ...+.|+|+.-++....... ...+ .++..+.+++ ..++...+
T Consensus 65 ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~-~~~g--~~ii~~~~~~dv~~l~~~~~ 141 (277)
T 3evf_A 65 WFHERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNV-QSLG--WNIITFKDKTDIHRLEPVKC 141 (277)
T ss_dssp HHHHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCC-CBTT--GGGEEEECSCCTTTSCCCCC
T ss_pred HHHHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccccccc-CcCC--CCeEEEeccceehhcCCCCc
Confidence 3444555678889999999999999988763 45788888875431000000 0011 1344556654 33444589
Q ss_pred ceeecccCcc
Q 047897 97 DLVVANIPYG 106 (232)
Q Consensus 97 D~Vi~n~p~~ 106 (232)
|+|++++.-+
T Consensus 142 DlVlsD~apn 151 (277)
T 3evf_A 142 DTLLCDIGES 151 (277)
T ss_dssp SEEEECCCCC
T ss_pred cEEEecCccC
Confidence 9999998544
No 294
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.95 E-value=7.1e-06 Score=68.27 Aligned_cols=69 Identities=22% Similarity=0.331 Sum_probs=56.8
Q ss_pred CEEEEEcCCccHhHHHHHhcC---CeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCC---C--Ccceeeccc
Q 047897 32 DTVLEIGPGTGNLTLKLLEVS---KKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEF---P--QFDLVVANI 103 (232)
Q Consensus 32 ~~vLDiG~G~G~~t~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~---~--~~D~Vi~n~ 103 (232)
.+|+|+.||.|.++..+...+ ..|+++|+|+.+++..+.|+. +..++++|+.++.. + .+|+|++++
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~------~~~~~~~Di~~~~~~~~~~~~~D~l~~gp 76 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP------HTQLLAKTIEGITLEEFDRLSFDMILMSP 76 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT------TSCEECSCGGGCCHHHHHHHCCSEEEECC
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc------ccccccCCHHHccHhHcCcCCcCEEEEcC
Confidence 479999999999999998865 368999999999999999973 34578899988753 1 589999999
Q ss_pred Ccc
Q 047897 104 PYG 106 (232)
Q Consensus 104 p~~ 106 (232)
|+.
T Consensus 77 PCq 79 (343)
T 1g55_A 77 PCQ 79 (343)
T ss_dssp C--
T ss_pred CCc
Confidence 954
No 295
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.93 E-value=5.2e-06 Score=66.29 Aligned_cols=83 Identities=22% Similarity=0.223 Sum_probs=53.6
Q ss_pred HHHHhcCCCCCCEEEEEcCCccHhHHHHHh--cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEE-c-CCCCCCCCCc
Q 047897 21 SIVRKSSINPDDTVLEIGPGTGNLTLKLLE--VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVIS-K-DALKTEFPQF 96 (232)
Q Consensus 21 ~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~-~-D~~~~~~~~~ 96 (232)
+|.+...+.++.+|||+|||+|.++..++. ....|+|+|+...+...+... ...+ .++.... . |+..++...+
T Consensus 81 ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~~~g--~~ii~~~~~~dv~~l~~~~~ 157 (282)
T 3gcz_A 81 WMEERGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-TTLG--WNLIRFKDKTDVFNMEVIPG 157 (282)
T ss_dssp HHHHTTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-CBTT--GGGEEEECSCCGGGSCCCCC
T ss_pred HHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-ccCC--CceEEeeCCcchhhcCCCCc
Confidence 444555677888999999999999998886 346789999976532211100 0111 2333333 2 5555555689
Q ss_pred ceeecccCcc
Q 047897 97 DLVVANIPYG 106 (232)
Q Consensus 97 D~Vi~n~p~~ 106 (232)
|+|+|++.-+
T Consensus 158 DvVLSDmApn 167 (282)
T 3gcz_A 158 DTLLCDIGES 167 (282)
T ss_dssp SEEEECCCCC
T ss_pred CEEEecCccC
Confidence 9999998655
No 296
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.89 E-value=1.7e-05 Score=66.36 Aligned_cols=75 Identities=21% Similarity=0.386 Sum_probs=60.6
Q ss_pred CCCEEEEEcCCccHhHHHHHh-cCCeEEEEEcCHHHHHHHHHHHhhcC---C----CccEEEEEcCCCCCC------CCC
Q 047897 30 PDDTVLEIGPGTGNLTLKLLE-VSKKVHAIEIDERMVEILNRRAADSG---F----HDRLNVISKDALKTE------FPQ 95 (232)
Q Consensus 30 ~~~~vLDiG~G~G~~t~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~---~----~~~~~~~~~D~~~~~------~~~ 95 (232)
+..+||=||.|.|..++++++ ...+|+.||+|+.+++.|++.+.... + .++++++.+|+.++- ...
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~ 284 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 284 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCc
Confidence 457999999999999999998 56789999999999999999874311 1 146899999997652 237
Q ss_pred cceeecccC
Q 047897 96 FDLVVANIP 104 (232)
Q Consensus 96 ~D~Vi~n~p 104 (232)
||+||.+++
T Consensus 285 yDvIIvDl~ 293 (381)
T 3c6k_A 285 FDYVINDLT 293 (381)
T ss_dssp EEEEEEECC
T ss_pred eeEEEECCC
Confidence 999999864
No 297
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.75 E-value=4.9e-05 Score=62.76 Aligned_cols=70 Identities=19% Similarity=0.237 Sum_probs=56.9
Q ss_pred CCEEEEEcCCccHhHHHHHhcCC-eEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCC---CCcceeecccCcc
Q 047897 31 DDTVLEIGPGTGNLTLKLLEVSK-KVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEF---PQFDLVVANIPYG 106 (232)
Q Consensus 31 ~~~vLDiG~G~G~~t~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~---~~~D~Vi~n~p~~ 106 (232)
+.+++|+.||.|.++..+...+. .|.++|+|+.+++..+.|+... . ++|+.++.. +.+|+|++++|+.
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~------~--~~Di~~~~~~~~~~~D~l~~gpPCQ 82 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEK------P--EGDITQVNEKTIPDHDILCAGFPCQ 82 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCC------C--BSCGGGSCGGGSCCCSEEEEECCCT
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCC------C--cCCHHHcCHhhCCCCCEEEECCCCC
Confidence 46899999999999999988665 4678999999999999997431 1 688887643 4689999999986
Q ss_pred cc
Q 047897 107 IS 108 (232)
Q Consensus 107 ~~ 108 (232)
.-
T Consensus 83 ~f 84 (327)
T 2c7p_A 83 AF 84 (327)
T ss_dssp TT
T ss_pred Cc
Confidence 43
No 298
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.70 E-value=1.4e-05 Score=62.89 Aligned_cols=84 Identities=14% Similarity=0.179 Sum_probs=50.9
Q ss_pred HHHHhcCCCCCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhh-cCCCccEEEEEc-CCCCCCCCCc
Q 047897 21 SIVRKSSINPDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAAD-SGFHDRLNVISK-DALKTEFPQF 96 (232)
Q Consensus 21 ~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~~~~~~~-D~~~~~~~~~ 96 (232)
+|-+..-++++.+|+|+||++|..+..+++. ...|.|..+..+. .. ...... .|+ .=+.+..+ |+.+.+...+
T Consensus 64 EIdeK~likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~~-~P~~~~~~Gv-~~i~~~~G~Df~~~~~~~~ 140 (269)
T 2px2_A 64 WLVERRFVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-HE-EPMLMQSYGW-NIVTMKSGVDVFYKPSEIS 140 (269)
T ss_dssp HHHHTTSCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-SC-CCCCCCSTTG-GGEEEECSCCGGGSCCCCC
T ss_pred HHHHcCCCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-cc-CCCcccCCCc-eEEEeeccCCccCCCCCCC
Confidence 3444444678999999999999999999885 3344444443221 00 000000 111 11355557 9998765689
Q ss_pred ceeecccCccc
Q 047897 97 DLVVANIPYGI 107 (232)
Q Consensus 97 D~Vi~n~p~~~ 107 (232)
|+|+|++.=+.
T Consensus 141 DvVLSDMAPnS 151 (269)
T 2px2_A 141 DTLLCDIGESS 151 (269)
T ss_dssp SEEEECCCCCC
T ss_pred CEEEeCCCCCC
Confidence 99999973343
No 299
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.68 E-value=2.4e-05 Score=62.33 Aligned_cols=75 Identities=19% Similarity=0.072 Sum_probs=52.6
Q ss_pred CCCCEEEEEcCCccHhHHHHHhc--------------CCeEEEEEcCH--------------HHHHHHHHHHhhcC----
Q 047897 29 NPDDTVLEIGPGTGNLTLKLLEV--------------SKKVHAIEIDE--------------RMVEILNRRAADSG---- 76 (232)
Q Consensus 29 ~~~~~vLDiG~G~G~~t~~l~~~--------------~~~v~~vD~~~--------------~~~~~a~~~~~~~~---- 76 (232)
.+..+|||||+|+|..+..+++. ..+++++|.++ ++.+.+++++..+.
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 34568999999999988776541 14899999887 44446777765410
Q ss_pred ------CC---ccEEEEEcCCCCC-CC------CCcceeeccc
Q 047897 77 ------FH---DRLNVISKDALKT-EF------PQFDLVVANI 103 (232)
Q Consensus 77 ------~~---~~~~~~~~D~~~~-~~------~~~D~Vi~n~ 103 (232)
+. .+++++.||+.+. +. ..||+|+.+.
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~ 181 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDG 181 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECS
T ss_pred chhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECC
Confidence 11 4688999999773 21 1699999874
No 300
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=97.65 E-value=8.9e-05 Score=61.10 Aligned_cols=62 Identities=23% Similarity=0.252 Sum_probs=55.0
Q ss_pred CCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcC
Q 047897 14 TNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSG 76 (232)
Q Consensus 14 ~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~ 76 (232)
.+..+++.+++... .+|+.|||..||+|..+.+....+.+.+|+|+++..++.+++++...+
T Consensus 237 kp~~l~~~~i~~~~-~~~~~VlDpF~GsGtt~~aa~~~gr~~ig~e~~~~~~~~~~~r~~~~~ 298 (323)
T 1boo_A 237 FPAKLPEFFIRMLT-EPDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYVAASAFRFLDNN 298 (323)
T ss_dssp CCTHHHHHHHHHHC-CTTCEEEETTCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHGGGSCSC
T ss_pred CCHHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCCCEEEEeCCHHHHHHHHHHHHhcc
Confidence 45688999987763 688999999999999999999999999999999999999999987655
No 301
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=97.62 E-value=0.00013 Score=59.32 Aligned_cols=73 Identities=21% Similarity=0.141 Sum_probs=58.9
Q ss_pred CCCCEEEEEcCCccHhHHHHHhcCCe---EEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCC------CCccee
Q 047897 29 NPDDTVLEIGPGTGNLTLKLLEVSKK---VHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEF------PQFDLV 99 (232)
Q Consensus 29 ~~~~~vLDiG~G~G~~t~~l~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~------~~~D~V 99 (232)
..+.+++|+.||.|.++..+.+.+.+ |.++|+|+..++..+.|+ +...++.+|+.++.. +.+|++
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~------~~~~~~~~DI~~i~~~~i~~~~~~Dll 87 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRH------QGKIMYVGDVRSVTQKHIQEWGPFDLV 87 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHT------TTCEEEECCGGGCCHHHHHHTCCCSEE
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhC------CCCceeCCChHHccHHHhcccCCcCEE
Confidence 34568999999999999999886654 589999999998888776 235688999988753 258999
Q ss_pred ecccCccc
Q 047897 100 VANIPYGI 107 (232)
Q Consensus 100 i~n~p~~~ 107 (232)
++.+|+..
T Consensus 88 ~ggpPCQ~ 95 (295)
T 2qrv_A 88 IGGSPCND 95 (295)
T ss_dssp EECCCCGG
T ss_pred EecCCCcc
Confidence 99998754
No 302
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=97.60 E-value=0.00013 Score=60.05 Aligned_cols=62 Identities=19% Similarity=0.259 Sum_probs=53.2
Q ss_pred CCHHHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCH---HHHHHHHHHHhhcC
Q 047897 14 TNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDE---RMVEILNRRAADSG 76 (232)
Q Consensus 14 ~~~~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~---~~~~~a~~~~~~~~ 76 (232)
.+..+++.+++... .+++.|||.-||+|..+.+....+.+.+|+|+++ ..++.+++++...+
T Consensus 227 kp~~l~~~~i~~~~-~~~~~vlDpF~GsGtt~~aa~~~~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 227 KPAAVIERLVRALS-HPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp CCHHHHHHHHHHHS-CTTCEEEETTCTTCHHHHHHHHHTCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCHHHHHHHHHHhC-CCCCEEEecCCCCCHHHHHHHHcCCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 56889999998764 6789999999999999999999999999999999 99999999987544
No 303
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.47 E-value=0.00028 Score=56.85 Aligned_cols=75 Identities=9% Similarity=0.067 Sum_probs=58.3
Q ss_pred CCCEEEEEcCCccHhHHHHHh-------cCCeEEEEEcCHH--------------------------HHHHHHHHHhhcC
Q 047897 30 PDDTVLEIGPGTGNLTLKLLE-------VSKKVHAIEIDER--------------------------MVEILNRRAADSG 76 (232)
Q Consensus 30 ~~~~vLDiG~G~G~~t~~l~~-------~~~~v~~vD~~~~--------------------------~~~~a~~~~~~~~ 76 (232)
....|||+|+..|.-+..++. ...+|+++|..+. .++.+++++...|
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~g 185 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYD 185 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcC
Confidence 345899999999998887765 1678999996421 4677899999998
Q ss_pred CC-ccEEEEEcCCCCC-C---CCCcceeecccC
Q 047897 77 FH-DRLNVISKDALKT-E---FPQFDLVVANIP 104 (232)
Q Consensus 77 ~~-~~~~~~~~D~~~~-~---~~~~D~Vi~n~p 104 (232)
+. ++++++.||+.+. + ..++|+|+.+.-
T Consensus 186 l~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD 218 (282)
T 2wk1_A 186 LLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGD 218 (282)
T ss_dssp CCSTTEEEEESCHHHHSTTCCCCCEEEEEECCC
T ss_pred CCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCC
Confidence 84 7999999999763 2 237899998753
No 304
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=97.44 E-value=0.00023 Score=58.65 Aligned_cols=71 Identities=17% Similarity=0.140 Sum_probs=57.1
Q ss_pred CCEEEEEcCCccHhHHHHHhcC---CeE-EEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC-----Ccceeec
Q 047897 31 DDTVLEIGPGTGNLTLKLLEVS---KKV-HAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP-----QFDLVVA 101 (232)
Q Consensus 31 ~~~vLDiG~G~G~~t~~l~~~~---~~v-~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~-----~~D~Vi~ 101 (232)
.-+++|+.||.|.++..+.+.+ ..| .++|+|+.+++..+.|+.. . ++++|+.++... .+|++++
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~------~-~~~~DI~~~~~~~i~~~~~Dil~g 82 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE------E-VQVKNLDSISIKQIESLNCNTWFM 82 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC------C-CBCCCTTTCCHHHHHHTCCCEEEE
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC------C-cccCChhhcCHHHhccCCCCEEEe
Confidence 4589999999999999998865 456 6999999999999998732 2 678899887532 5899999
Q ss_pred ccCcccc
Q 047897 102 NIPYGIS 108 (232)
Q Consensus 102 n~p~~~~ 108 (232)
.+|...-
T Consensus 83 gpPCQ~f 89 (327)
T 3qv2_A 83 SPPCQPY 89 (327)
T ss_dssp CCCCTTC
T ss_pred cCCccCc
Confidence 9996544
No 305
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=97.41 E-value=0.00015 Score=60.00 Aligned_cols=70 Identities=16% Similarity=0.266 Sum_probs=56.7
Q ss_pred CEEEEEcCCccHhHHHHHhcC---CeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCC-----Ccceeeccc
Q 047897 32 DTVLEIGPGTGNLTLKLLEVS---KKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFP-----QFDLVVANI 103 (232)
Q Consensus 32 ~~vLDiG~G~G~~t~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~-----~~D~Vi~n~ 103 (232)
-+++|+.||.|.++..+.+.+ .-|.++|+|+.+++..+.|+. ...++.+|+.++... .+|++++.+
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~------~~~~~~~DI~~~~~~~~~~~~~D~l~ggp 77 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFP------ETNLLNRNIQQLTPQVIKKWNVDTILMSP 77 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT------TSCEECCCGGGCCHHHHHHTTCCEEEECC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCC------CCceeccccccCCHHHhccCCCCEEEecC
Confidence 379999999999999998755 357799999999999988873 345778999887532 589999999
Q ss_pred Cccc
Q 047897 104 PYGI 107 (232)
Q Consensus 104 p~~~ 107 (232)
|...
T Consensus 78 PCQ~ 81 (333)
T 4h0n_A 78 PCQP 81 (333)
T ss_dssp CCCC
T ss_pred CCcc
Confidence 8663
No 306
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=97.41 E-value=0.00029 Score=58.02 Aligned_cols=68 Identities=19% Similarity=0.295 Sum_probs=56.0
Q ss_pred EEEEEcCCccHhHHHHHhcCCe-EEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCC---CCcceeecccCccc
Q 047897 33 TVLEIGPGTGNLTLKLLEVSKK-VHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEF---PQFDLVVANIPYGI 107 (232)
Q Consensus 33 ~vLDiG~G~G~~t~~l~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~---~~~D~Vi~n~p~~~ 107 (232)
+|||+-||.|.++..+-+.+.+ +.++|+|+.+++..+.|+. -.++.+|+.++.. +..|++++.+|+..
T Consensus 2 kvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~-------~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ~ 73 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHS-------AKLIKGDISKISSDEFPKCDGIIGGPPSQS 73 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHCC-------SEEEESCGGGCCGGGSCCCSEEECCCCGGG
T ss_pred eEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHCC-------CCcccCChhhCCHhhCCcccEEEecCCCCC
Confidence 6999999999999999886655 5599999999999888862 3578899988754 47899999998763
No 307
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=97.27 E-value=0.00087 Score=56.97 Aligned_cols=63 Identities=17% Similarity=0.194 Sum_probs=50.9
Q ss_pred CCCCCEEEEEcCCccHhHHHHH-h-c--CCeEEEEEcCHHHHHHHHHHHhh--cCCC-ccEEEEEcCCCC
Q 047897 28 INPDDTVLEIGPGTGNLTLKLL-E-V--SKKVHAIEIDERMVEILNRRAAD--SGFH-DRLNVISKDALK 90 (232)
Q Consensus 28 ~~~~~~vLDiG~G~G~~t~~l~-~-~--~~~v~~vD~~~~~~~~a~~~~~~--~~~~-~~~~~~~~D~~~ 90 (232)
+.+++.++|||++.|..+..++ + . ..+|+++|.++..++.++++... ++.. +++++++.-+-+
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~~ 293 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAGE 293 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEECS
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEEC
Confidence 4688999999999999999887 3 2 27999999999999999999987 2222 578887765543
No 308
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.20 E-value=0.00012 Score=58.81 Aligned_cols=77 Identities=14% Similarity=0.163 Sum_probs=47.7
Q ss_pred CCCCCEEEEEcCCccHhHHHHHhc--CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEc-CCCCCCCCCcceeecccC
Q 047897 28 INPDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISK-DALKTEFPQFDLVVANIP 104 (232)
Q Consensus 28 ~~~~~~vLDiG~G~G~~t~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~-D~~~~~~~~~D~Vi~n~p 104 (232)
+.++.+|||+||++|.++..+++. ...|+|+|+...+...... ....+. +-+.+..+ |+..+....+|+|++|+.
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~~~~~-~iv~~~~~~di~~l~~~~~DlVlsD~A 156 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQTLGW-NIVKFKDKSNVFTMPTEPSDTLLCDIG 156 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCBTTG-GGEEEECSCCTTTSCCCCCSEEEECCC
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-ccccCC-ceEEeecCceeeecCCCCcCEEeecCc
Confidence 457889999999999999999973 4578999987532110000 000011 11333322 444555458999999975
Q ss_pred cc
Q 047897 105 YG 106 (232)
Q Consensus 105 ~~ 106 (232)
-+
T Consensus 157 Pn 158 (300)
T 3eld_A 157 ES 158 (300)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 309
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=97.15 E-value=0.0004 Score=60.14 Aligned_cols=76 Identities=14% Similarity=0.210 Sum_probs=58.2
Q ss_pred CCEEEEEcCCccHhHHHHHhcCCe-EEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC-----------------
Q 047897 31 DDTVLEIGPGTGNLTLKLLEVSKK-VHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE----------------- 92 (232)
Q Consensus 31 ~~~vLDiG~G~G~~t~~l~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~----------------- 92 (232)
.-+++|+.||.|+++..+.+.+.+ |.++|+|+.+++..+.|+... +...++.+|+.++.
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~~---p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i~ 164 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYCD---PATHHFNEDIRDITLSHQEGVSDEAAAEHIR 164 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCCC---TTTCEEESCTHHHHCTTCTTSCHHHHHHHHH
T ss_pred cceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhcccC---CCcceeccchhhhhhccccccchhhHHhhhh
Confidence 357999999999999999886644 789999999999888886321 23456788987653
Q ss_pred --CCCcceeecccCcccch
Q 047897 93 --FPQFDLVVANIPYGISS 109 (232)
Q Consensus 93 --~~~~D~Vi~n~p~~~~~ 109 (232)
.+.+|++++.+|+..-+
T Consensus 165 ~~~~~~Dvl~gGpPCQ~FS 183 (482)
T 3me5_A 165 QHIPEHDVLLAGFPCQPFS 183 (482)
T ss_dssp HHSCCCSEEEEECCCCCC-
T ss_pred hcCCCCCEEEecCCCcchh
Confidence 23689999999976543
No 310
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=96.94 E-value=0.0043 Score=51.95 Aligned_cols=92 Identities=11% Similarity=0.115 Sum_probs=50.5
Q ss_pred HHHHHHHhcCCCC-----CCEEEEEcCCccHhHHHHHh-----------------cCCeEEEEEcCHHHHHHHHHHHhhc
Q 047897 18 VLDSIVRKSSINP-----DDTVLEIGPGTGNLTLKLLE-----------------VSKKVHAIEIDERMVEILNRRAADS 75 (232)
Q Consensus 18 ~~~~i~~~~~~~~-----~~~vLDiG~G~G~~t~~l~~-----------------~~~~v~~vD~~~~~~~~a~~~~~~~ 75 (232)
++++.++.+.... ..+|+|+|||+|..|..++. +..+|+.-|+-..-....=+.+...
T Consensus 35 ~~~~ai~~l~~~~~~~~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~ 114 (374)
T 3b5i_A 35 LLEETLENVHLNSSASPPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPL 114 (374)
T ss_dssp HHHHHHHTSCCCCSSSCCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCB
T ss_pred HHHHHHHHhhccccCCCCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhh
Confidence 3344445554433 46899999999999988843 1235666665544333222222211
Q ss_pred C-----------CCccEEEEEc---CCCC--CCCCCcceeecccCcccch
Q 047897 76 G-----------FHDRLNVISK---DALK--TEFPQFDLVVANIPYGISS 109 (232)
Q Consensus 76 ~-----------~~~~~~~~~~---D~~~--~~~~~~D~Vi~n~p~~~~~ 109 (232)
. ...+-.++.+ .+.. +|..++|+|+++...||-+
T Consensus 115 ~~~~~~~~~~~~~~~~~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls 164 (374)
T 3b5i_A 115 VSNTCMEECLAADGNRSYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLS 164 (374)
T ss_dssp CCCC--CCC---CCCBCSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCS
T ss_pred hhhcchhhhccccCCCceEEEecChhhhcccCCCcceEEEEecceeeeec
Confidence 0 0001112332 2222 2334899999999988875
No 311
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=96.14 E-value=0.006 Score=57.24 Aligned_cols=70 Identities=14% Similarity=0.180 Sum_probs=52.9
Q ss_pred CCEEEEEcCCccHhHHHHHhcCC--eEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCC-----------------C
Q 047897 31 DDTVLEIGPGTGNLTLKLLEVSK--KVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALK-----------------T 91 (232)
Q Consensus 31 ~~~vLDiG~G~G~~t~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~-----------------~ 91 (232)
.-+++|+-||.|+++..+.+.+. -+.|+|+|+.+++..+.|+ ++..++.+|+.+ +
T Consensus 540 ~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~------p~~~~~~~DI~~l~~~~~~~di~~~~~~~l 613 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNN------PGSTVFTEDCNILLKLVMAGETTNSRGQRL 613 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHC------TTSEEECSCHHHHHHHHHHTCSBCTTCCBC
T ss_pred CCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhC------CCCccccccHHHHhhhccchhhhhhhhhhc
Confidence 34799999999999999988664 5779999999999888886 335566665421 1
Q ss_pred CC-CCcceeecccCcc
Q 047897 92 EF-PQFDLVVANIPYG 106 (232)
Q Consensus 92 ~~-~~~D~Vi~n~p~~ 106 (232)
+. ..+|+|++.+|..
T Consensus 614 p~~~~vDll~GGpPCQ 629 (1002)
T 3swr_A 614 PQKGDVEMLCGGPPCQ 629 (1002)
T ss_dssp CCTTTCSEEEECCCCT
T ss_pred ccCCCeeEEEEcCCCc
Confidence 11 2689999999854
No 312
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=96.02 E-value=0.034 Score=46.63 Aligned_cols=51 Identities=25% Similarity=0.351 Sum_probs=38.0
Q ss_pred CCEEEEEcCCccHhHHHHHh---------cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEE
Q 047897 31 DDTVLEIGPGTGNLTLKLLE---------VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVI 84 (232)
Q Consensus 31 ~~~vLDiG~G~G~~t~~l~~---------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~ 84 (232)
.-.|+|+|+|.|.++..+++ ...+++.||+|+.+.+.=++++... +++.+.
T Consensus 81 ~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~---~~v~W~ 140 (387)
T 1zkd_A 81 TLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGI---RNIHWH 140 (387)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTC---SSEEEE
T ss_pred CcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCC---CCeEEe
Confidence 34699999999999888875 1238999999999988766666442 245554
No 313
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=95.84 E-value=0.022 Score=47.75 Aligned_cols=76 Identities=11% Similarity=-0.005 Sum_probs=48.3
Q ss_pred CCEEEEEcCCccHhHHHHHhc-------------------CCeEEEEEcC-----------HHHHHHHHHHHhhcCCCcc
Q 047897 31 DDTVLEIGPGTGNLTLKLLEV-------------------SKKVHAIEID-----------ERMVEILNRRAADSGFHDR 80 (232)
Q Consensus 31 ~~~vLDiG~G~G~~t~~l~~~-------------------~~~v~~vD~~-----------~~~~~~a~~~~~~~~~~~~ 80 (232)
.-+|+|+|||+|..|..++.. ..+|+..|+- +.+.+.+++. .|...+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~---~g~~~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKE---NGRKIG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHH---TCCCTT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhh---ccCCCC
Confidence 468999999999999887762 1346677765 3333333221 121112
Q ss_pred EEEEEcCCCCC-----CCCCcceeecccCcccch
Q 047897 81 LNVISKDALKT-----EFPQFDLVVANIPYGISS 109 (232)
Q Consensus 81 ~~~~~~D~~~~-----~~~~~D~Vi~n~p~~~~~ 109 (232)
..|+.|....+ |..++|+|++|...||.+
T Consensus 130 ~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls 163 (384)
T 2efj_A 130 SCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLS 163 (384)
T ss_dssp SEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCS
T ss_pred ceEEEecchhhhhccCCCCceEEEEecceeeecC
Confidence 35666665553 334899999999988865
No 314
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=95.83 E-value=0.0093 Score=47.92 Aligned_cols=99 Identities=12% Similarity=0.174 Sum_probs=57.0
Q ss_pred CCCCCCEEEEEcC------CccHhHHHHHhc-CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCC-CCcce
Q 047897 27 SINPDDTVLEIGP------GTGNLTLKLLEV-SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEF-PQFDL 98 (232)
Q Consensus 27 ~~~~~~~vLDiG~------G~G~~t~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~-~~~D~ 98 (232)
....+++|||+|+ -+|.....-..+ +..|+++|+.+-.. . .. .+++||..+... .++|+
T Consensus 106 ~vp~gmrVLDLGA~s~kg~APGS~VLr~~~p~g~~VVavDL~~~~s-----------d-a~-~~IqGD~~~~~~~~k~DL 172 (344)
T 3r24_A 106 AVPYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFVS-----------D-AD-STLIGDCATVHTANKWDL 172 (344)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCCBC-----------S-SS-EEEESCGGGEEESSCEEE
T ss_pred eecCCCEEEeCCCCCCCCCCCcHHHHHHhCCCCcEEEEeeCccccc-----------C-CC-eEEEccccccccCCCCCE
Confidence 4557899999995 777732221123 46999999977311 1 23 459999876554 48999
Q ss_pred eecccCcccchHHHHHHhcCCCCccceEehhHHHHHHHHhcCCCC
Q 047897 99 VVANIPYGISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGD 143 (232)
Q Consensus 99 Vi~n~p~~~~~~~l~~~~~~~~~~~~~~~~~q~e~~~rl~~~~g~ 143 (232)
|+|++--+.+.. ......-.......-.++++..+++.|+
T Consensus 173 VISDMAPNtTG~-----~D~d~~Rs~~L~ElALdfA~~~LkpGGs 212 (344)
T 3r24_A 173 IISDMYDPRTKH-----VTKENDSKEGFFTYLCGFIKQKLALGGS 212 (344)
T ss_dssp EEECCCCTTSCS-----SCSCCCCCCTHHHHHHHHHHHHEEEEEE
T ss_pred EEecCCCCcCCc-----cccchhHHHHHHHHHHHHHHHhCcCCCE
Confidence 999974333321 1111100111223344677777776654
No 315
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=95.76 E-value=0.017 Score=49.10 Aligned_cols=65 Identities=15% Similarity=0.246 Sum_probs=45.9
Q ss_pred ccccCCHHHHHHHHH--------hcCCCCCCEEEEEcCCccHhHHHHHh---c----CCeEEEEEcCHHHHHHHHHHHhh
Q 047897 10 QHILTNQRVLDSIVR--------KSSINPDDTVLEIGPGTGNLTLKLLE---V----SKKVHAIEIDERMVEILNRRAAD 74 (232)
Q Consensus 10 q~fl~~~~~~~~i~~--------~~~~~~~~~vLDiG~G~G~~t~~l~~---~----~~~v~~vD~~~~~~~~a~~~~~~ 74 (232)
-.|.|.|++..-+-+ .......-.|+|+|+|+|.++..+++ . ..+++.||+|+.+.+.=++++..
T Consensus 109 GDFiTAPeiS~~FGe~la~~~~~~~~~~g~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 109 SDFVTAPELSPLFAQTLARPVAQALDASGTRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp -CCSSCGGGHHHHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred CCccCchhhhHHHHHHHHHHHHHHHHhcCCCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 358888776443222 21111246899999999999988876 1 24799999999998887777754
No 316
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=95.64 E-value=0.022 Score=52.41 Aligned_cols=42 Identities=17% Similarity=0.248 Sum_probs=35.4
Q ss_pred CCEEEEEcCCccHhHHHHHhcC-------CeEEEEEcCHHHHHHHHHHH
Q 047897 31 DDTVLEIGPGTGNLTLKLLEVS-------KKVHAIEIDERMVEILNRRA 72 (232)
Q Consensus 31 ~~~vLDiG~G~G~~t~~l~~~~-------~~v~~vD~~~~~~~~a~~~~ 72 (232)
..+|+|+-||.|+++.-+-..+ .-+.++|+|+.+++..+.|+
T Consensus 212 ~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 212 TATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 3579999999999998887633 35779999999999998886
No 317
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=95.10 E-value=0.027 Score=47.60 Aligned_cols=43 Identities=14% Similarity=0.006 Sum_probs=36.5
Q ss_pred CEEEEEcCCccHhHHHHHhcC---Ce----EEEEEcCHHHHHHHHHHHhh
Q 047897 32 DTVLEIGPGTGNLTLKLLEVS---KK----VHAIEIDERMVEILNRRAAD 74 (232)
Q Consensus 32 ~~vLDiG~G~G~~t~~l~~~~---~~----v~~vD~~~~~~~~a~~~~~~ 74 (232)
-+|+|+.||.|+++..+.+.+ .- |.++|+|+.+++..+.++..
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~ 60 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSK 60 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCS
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCC
Confidence 489999999999999998744 33 78999999999999888854
No 318
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=95.03 E-value=0.042 Score=53.05 Aligned_cols=71 Identities=14% Similarity=0.179 Sum_probs=53.0
Q ss_pred CCEEEEEcCCccHhHHHHHhcCC--eEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCC------------C-----C
Q 047897 31 DDTVLEIGPGTGNLTLKLLEVSK--KVHAIEIDERMVEILNRRAADSGFHDRLNVISKDAL------------K-----T 91 (232)
Q Consensus 31 ~~~vLDiG~G~G~~t~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~------------~-----~ 91 (232)
.-+++|+.||.|+++..+...+. -+.++|+++.+++..+.|+. ...++.+|+. + +
T Consensus 851 ~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~p------~~~~~~~DI~~l~~~~~~gdi~~~~~~~l 924 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNP------GTTVFTEDCNVLLKLVMAGEVTNSLGQRL 924 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHCT------TSEEECSCHHHHHHHHTTTCSBCSSCCBC
T ss_pred CceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC------CCcEeeccHHHHhHhhhccchhhhhhhhc
Confidence 45799999999999999988764 47799999999998888862 3445555532 1 1
Q ss_pred CC-CCcceeecccCccc
Q 047897 92 EF-PQFDLVVANIPYGI 107 (232)
Q Consensus 92 ~~-~~~D~Vi~n~p~~~ 107 (232)
+. ..+|+|++.+|...
T Consensus 925 p~~~~vDvl~GGpPCQ~ 941 (1330)
T 3av4_A 925 PQKGDVEMLCGGPPCQG 941 (1330)
T ss_dssp CCTTTCSEEEECCCCTT
T ss_pred cccCccceEEecCCCcc
Confidence 11 25799999998654
No 319
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=94.84 E-value=0.13 Score=40.60 Aligned_cols=72 Identities=19% Similarity=0.309 Sum_probs=56.4
Q ss_pred CCCEEEEEcCCccH---hHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------CC
Q 047897 30 PDDTVLEIGPGTGN---LTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------FP 94 (232)
Q Consensus 30 ~~~~vLDiG~G~G~---~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~~ 94 (232)
+|+.+|=-|.+.|. ++..+++.+++|+.+|.+++.++.+.+.+...| .++.++.+|+.+.. +.
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g--~~~~~~~~Dvt~~~~v~~~~~~~~~~~G 83 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMG--KEVLGVKADVSKKKDVEEFVRRTFETYS 83 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 57788888887773 556666689999999999998888888887766 56999999998753 23
Q ss_pred Ccceeeccc
Q 047897 95 QFDLVVANI 103 (232)
Q Consensus 95 ~~D~Vi~n~ 103 (232)
..|+++.|-
T Consensus 84 ~iDiLVNNA 92 (254)
T 4fn4_A 84 RIDVLCNNA 92 (254)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 578888764
No 320
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=94.67 E-value=0.021 Score=47.47 Aligned_cols=80 Identities=9% Similarity=0.015 Sum_probs=52.4
Q ss_pred CCEEEEEcCCccHhHHHHHhc------------------CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCC--
Q 047897 31 DDTVLEIGPGTGNLTLKLLEV------------------SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALK-- 90 (232)
Q Consensus 31 ~~~vLDiG~G~G~~t~~l~~~------------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~-- 90 (232)
.-+|+|+||++|..|..+... ..+|+..|.-......+-+.+.......+..|+.|....
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 356899999999988876653 246888898877777666665431100023455544333
Q ss_pred -C--CCCCcceeecccCcccchH
Q 047897 91 -T--EFPQFDLVVANIPYGISSP 110 (232)
Q Consensus 91 -~--~~~~~D~Vi~n~p~~~~~~ 110 (232)
- |..++|+|++|...||.+.
T Consensus 132 ~rlfp~~S~d~v~Ss~aLHWls~ 154 (359)
T 1m6e_X 132 GRLFPRNTLHFIHSSYSLMWLSQ 154 (359)
T ss_dssp SCCSCTTCBSCEEEESCTTBCSS
T ss_pred hccCCCCceEEEEehhhhhhccc
Confidence 3 3348999999999888753
No 321
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.49 E-value=0.086 Score=37.28 Aligned_cols=70 Identities=24% Similarity=0.327 Sum_probs=47.4
Q ss_pred CCEEEEEcCCc-cH-hHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------CCCcceeecc
Q 047897 31 DDTVLEIGPGT-GN-LTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------FPQFDLVVAN 102 (232)
Q Consensus 31 ~~~vLDiG~G~-G~-~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------~~~~D~Vi~n 102 (232)
.++|+=+|+|. |. ++..|.+.+.+|+++|.+++.++.+++ . .+.++.+|+.+.. ....|.|+..
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~----g~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 78 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----R----GVRAVLGNAANEEIMQLAHLECAKWLILT 78 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T----TCEEEESCTTSHHHHHHTTGGGCSEEEEC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----c----CCCEEECCCCCHHHHHhcCcccCCEEEEE
Confidence 35688888865 32 233333468899999999998877654 2 3668999987642 2367888877
Q ss_pred cCcccc
Q 047897 103 IPYGIS 108 (232)
Q Consensus 103 ~p~~~~ 108 (232)
.|-...
T Consensus 79 ~~~~~~ 84 (140)
T 3fwz_A 79 IPNGYE 84 (140)
T ss_dssp CSCHHH
T ss_pred CCChHH
Confidence 664433
No 322
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=94.27 E-value=0.15 Score=41.99 Aligned_cols=62 Identities=23% Similarity=0.271 Sum_probs=46.2
Q ss_pred CCCEEEEEcCCccHhHHHHHhcCCeEEEEEcC-HHHHHHHHHHHhhcC--------------------CCccEEEEEcCC
Q 047897 30 PDDTVLEIGPGTGNLTLKLLEVSKKVHAIEID-ERMVEILNRRAADSG--------------------FHDRLNVISKDA 88 (232)
Q Consensus 30 ~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~-~~~~~~a~~~~~~~~--------------------~~~~~~~~~~D~ 88 (232)
+...|+.+|||.......+......+.-+|+| |+.++.-++.+...+ ..++..++.+|+
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~DL 176 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACDL 176 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECCT
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecCC
Confidence 45689999999999999998743455666666 888888777776541 125788999998
Q ss_pred CCC
Q 047897 89 LKT 91 (232)
Q Consensus 89 ~~~ 91 (232)
.+.
T Consensus 177 ~d~ 179 (334)
T 1rjd_A 177 NDI 179 (334)
T ss_dssp TCH
T ss_pred CCc
Confidence 774
No 323
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=94.20 E-value=0.11 Score=43.50 Aligned_cols=47 Identities=15% Similarity=0.225 Sum_probs=38.4
Q ss_pred HhcCCCCCCEEEEEcCCc-cHhHHHHHh-cCC-eEEEEEcCHHHHHHHHH
Q 047897 24 RKSSINPDDTVLEIGPGT-GNLTLKLLE-VSK-KVHAIEIDERMVEILNR 70 (232)
Q Consensus 24 ~~~~~~~~~~vLDiG~G~-G~~t~~l~~-~~~-~v~~vD~~~~~~~~a~~ 70 (232)
+.++++++++||-+|+|. |.++..+++ .+. +|+++|.+++..+.+++
T Consensus 179 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 228 (398)
T 2dph_A 179 VSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD 228 (398)
T ss_dssp HHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence 456778999999999976 777777777 566 99999999988877654
No 324
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.19 E-value=0.33 Score=32.52 Aligned_cols=78 Identities=17% Similarity=0.217 Sum_probs=52.8
Q ss_pred CCEEEEEcCCccHhHHHHHh----cC-CeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC-----CCCcceee
Q 047897 31 DDTVLEIGPGTGNLTLKLLE----VS-KKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE-----FPQFDLVV 100 (232)
Q Consensus 31 ~~~vLDiG~G~G~~t~~l~~----~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~-----~~~~D~Vi 100 (232)
+.+|+=+|+ |.++..++. .+ .+|+++|.+++-.+.+. . ..+.++.+|..+.. ...+|+|+
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~----~~~~~~~~d~~~~~~~~~~~~~~d~vi 74 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R----MGVATKQVDAKDEAGLAKALGGFDAVI 74 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T----TTCEEEECCTTCHHHHHHHTTTCSEEE
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h----CCCcEEEecCCCHHHHHHHHcCCCEEE
Confidence 457888888 555555444 56 78999999987766544 1 34677888876532 23679999
Q ss_pred cccCcccchHHHHHHhcC
Q 047897 101 ANIPYGISSPLVAKLVYG 118 (232)
Q Consensus 101 ~n~p~~~~~~~l~~~~~~ 118 (232)
...|+....+++......
T Consensus 75 ~~~~~~~~~~~~~~~~~~ 92 (118)
T 3ic5_A 75 SAAPFFLTPIIAKAAKAA 92 (118)
T ss_dssp ECSCGGGHHHHHHHHHHT
T ss_pred ECCCchhhHHHHHHHHHh
Confidence 888877666655554443
No 325
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.11 E-value=0.2 Score=35.15 Aligned_cols=64 Identities=17% Similarity=0.267 Sum_probs=45.2
Q ss_pred CCEEEEEcCCccHhHHHHHh----cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------CCCcceee
Q 047897 31 DDTVLEIGPGTGNLTLKLLE----VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------FPQFDLVV 100 (232)
Q Consensus 31 ~~~vLDiG~G~G~~t~~l~~----~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------~~~~D~Vi 100 (232)
..+|+=+|+|. ++..+++ .+.+|+++|.+++.++.+++. .+.++.+|+.+.. ....|.|+
T Consensus 6 ~~~v~I~G~G~--iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~--------~~~~~~gd~~~~~~l~~~~~~~~d~vi 75 (141)
T 3llv_A 6 RYEYIVIGSEA--AGVGLVRELTAAGKKVLAVDKSKEKIELLEDE--------GFDAVIADPTDESFYRSLDLEGVSAVL 75 (141)
T ss_dssp CCSEEEECCSH--HHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT--------TCEEEECCTTCHHHHHHSCCTTCSEEE
T ss_pred CCEEEEECCCH--HHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC--------CCcEEECCCCCHHHHHhCCcccCCEEE
Confidence 35688888854 4544444 688999999999887766532 2668899987642 34678888
Q ss_pred cccC
Q 047897 101 ANIP 104 (232)
Q Consensus 101 ~n~p 104 (232)
...|
T Consensus 76 ~~~~ 79 (141)
T 3llv_A 76 ITGS 79 (141)
T ss_dssp ECCS
T ss_pred EecC
Confidence 7766
No 326
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=93.76 E-value=0.4 Score=37.56 Aligned_cols=72 Identities=19% Similarity=0.278 Sum_probs=54.8
Q ss_pred CCCEEEEEcCCccH---hHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------CC
Q 047897 30 PDDTVLEIGPGTGN---LTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------FP 94 (232)
Q Consensus 30 ~~~~vLDiG~G~G~---~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~~ 94 (232)
.+.++|=.|++.|. ++..+++.+.+|+.++.+++.++.+.+.+...+ .++.++.+|+.+.. ++
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 87 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG--RRALSVGTDITDDAQVAHLVDETMKAYG 87 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 56788888887663 556666689999999999988877777776655 57999999998753 23
Q ss_pred Ccceeeccc
Q 047897 95 QFDLVVANI 103 (232)
Q Consensus 95 ~~D~Vi~n~ 103 (232)
..|++|.|-
T Consensus 88 ~id~lv~nA 96 (264)
T 3ucx_A 88 RVDVVINNA 96 (264)
T ss_dssp CCSEEEECC
T ss_pred CCcEEEECC
Confidence 578888774
No 327
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=93.65 E-value=0.19 Score=41.69 Aligned_cols=48 Identities=19% Similarity=0.311 Sum_probs=38.9
Q ss_pred HhcCCCCCCEEEEEcCCc-cHhHHHHHh-cCC-eEEEEEcCHHHHHHHHHH
Q 047897 24 RKSSINPDDTVLEIGPGT-GNLTLKLLE-VSK-KVHAIEIDERMVEILNRR 71 (232)
Q Consensus 24 ~~~~~~~~~~vLDiG~G~-G~~t~~l~~-~~~-~v~~vD~~~~~~~~a~~~ 71 (232)
+..++.++++||-+|+|. |.++..+++ .+. +|+++|.+++..+.+++.
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~l 234 (371)
T 1f8f_A 184 NALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL 234 (371)
T ss_dssp TTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc
Confidence 556788999999999876 777777777 566 799999999988887654
No 328
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=93.50 E-value=0.28 Score=40.09 Aligned_cols=49 Identities=20% Similarity=0.410 Sum_probs=40.1
Q ss_pred HHHhcCCCCCCEEEEEcCCc-cHhHHHHHh-cCCeEEEEEcCHHHHHHHHH
Q 047897 22 IVRKSSINPDDTVLEIGPGT-GNLTLKLLE-VSKKVHAIEIDERMVEILNR 70 (232)
Q Consensus 22 i~~~~~~~~~~~vLDiG~G~-G~~t~~l~~-~~~~v~~vD~~~~~~~~a~~ 70 (232)
.++...++++++||-+|+|. |.++..+++ .+.+|+++|.+++-.+.+++
T Consensus 158 ~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~ 208 (340)
T 3s2e_A 158 GLKVTDTRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARR 208 (340)
T ss_dssp HHHTTTCCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred HHHHcCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence 34566788999999999875 777777777 67899999999998887765
No 329
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=93.44 E-value=0.32 Score=38.52 Aligned_cols=72 Identities=18% Similarity=0.195 Sum_probs=52.4
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------CC
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------FP 94 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~~ 94 (232)
.+.++|=.|++.| .++..|++.+.+|++++.+++.++.+.+.+...+ .++.++.+|+.+.. ++
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 100 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAG--HDVDGSSCDVTSTDEVHAAVAAAVERFG 100 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4678888887665 2555566688999999999988877777766554 56999999998753 12
Q ss_pred Ccceeeccc
Q 047897 95 QFDLVVANI 103 (232)
Q Consensus 95 ~~D~Vi~n~ 103 (232)
..|++|.|.
T Consensus 101 ~id~lv~nA 109 (279)
T 3sju_A 101 PIGILVNSA 109 (279)
T ss_dssp SCCEEEECC
T ss_pred CCcEEEECC
Confidence 578888774
No 330
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=93.25 E-value=0.23 Score=39.20 Aligned_cols=72 Identities=15% Similarity=0.134 Sum_probs=55.0
Q ss_pred CCCEEEEEcCCccH---hHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------CC
Q 047897 30 PDDTVLEIGPGTGN---LTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------FP 94 (232)
Q Consensus 30 ~~~~vLDiG~G~G~---~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~~ 94 (232)
.|+++|=-|.+.|. ++..+++.+++|+..|.+++.++.+.+.+...+ .++..+.+|+.+.. +.
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 85 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG--YDAHGVAFDVTDELAIEAAFSKLDAEGI 85 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT--CCEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 57778888877663 556666689999999999998887777777666 46889999998752 33
Q ss_pred Ccceeeccc
Q 047897 95 QFDLVVANI 103 (232)
Q Consensus 95 ~~D~Vi~n~ 103 (232)
..|+++.|-
T Consensus 86 ~iDiLVNNA 94 (255)
T 4g81_D 86 HVDILINNA 94 (255)
T ss_dssp CCCEEEECC
T ss_pred CCcEEEECC
Confidence 679888874
No 331
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=92.92 E-value=0.51 Score=38.22 Aligned_cols=74 Identities=19% Similarity=0.221 Sum_probs=54.4
Q ss_pred CCCEEEEEcCCccH---hHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------CC
Q 047897 30 PDDTVLEIGPGTGN---LTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------FP 94 (232)
Q Consensus 30 ~~~~vLDiG~G~G~---~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~~ 94 (232)
.+.+||=.|++.|. ++..|++.+.+|++++.+++-.+.+.+.+...+...++.++.+|+.+.. ++
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 86 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG 86 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence 46688888877653 5555666889999999999888777777665543247999999998753 13
Q ss_pred Ccceeeccc
Q 047897 95 QFDLVVANI 103 (232)
Q Consensus 95 ~~D~Vi~n~ 103 (232)
..|++|.|-
T Consensus 87 ~id~lv~nA 95 (319)
T 3ioy_A 87 PVSILCNNA 95 (319)
T ss_dssp CEEEEEECC
T ss_pred CCCEEEECC
Confidence 568888774
No 332
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=92.89 E-value=0.32 Score=40.04 Aligned_cols=47 Identities=19% Similarity=0.345 Sum_probs=37.8
Q ss_pred HhcCCCCCCEEEEEcCCc-cHhHHHHHh-cCC-eEEEEEcCHHHHHHHHH
Q 047897 24 RKSSINPDDTVLEIGPGT-GNLTLKLLE-VSK-KVHAIEIDERMVEILNR 70 (232)
Q Consensus 24 ~~~~~~~~~~vLDiG~G~-G~~t~~l~~-~~~-~v~~vD~~~~~~~~a~~ 70 (232)
+.+++.++++||-+|+|. |.++..+++ .+. +|+++|.+++-.+.+++
T Consensus 165 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 214 (356)
T 1pl8_A 165 RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE 214 (356)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 456788999999999875 677777776 566 89999999988877764
No 333
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=92.85 E-value=0.64 Score=35.79 Aligned_cols=72 Identities=15% Similarity=0.192 Sum_probs=52.1
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------CC
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------FP 94 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~~ 94 (232)
.+.++|=.|++.| .++..+++.+.+|++++.+++..+.+.+.+...+ .++.++.+|+.+.. .+
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKG--FKARGLVLNISDIESIQNFFAEIKAENL 81 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 3567777776554 2455555578999999999988877777776655 46999999998752 22
Q ss_pred Ccceeeccc
Q 047897 95 QFDLVVANI 103 (232)
Q Consensus 95 ~~D~Vi~n~ 103 (232)
..|.+|.|.
T Consensus 82 ~id~li~~A 90 (247)
T 3lyl_A 82 AIDILVNNA 90 (247)
T ss_dssp CCSEEEECC
T ss_pred CCCEEEECC
Confidence 578888774
No 334
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=92.53 E-value=0.7 Score=36.57 Aligned_cols=73 Identities=16% Similarity=0.150 Sum_probs=51.7
Q ss_pred CCCEEEEEcCCccH---hHHHHHhcCCeEEEEEc-CHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCC------------
Q 047897 30 PDDTVLEIGPGTGN---LTLKLLEVSKKVHAIEI-DERMVEILNRRAADSGFHDRLNVISKDALKTEF------------ 93 (232)
Q Consensus 30 ~~~~vLDiG~G~G~---~t~~l~~~~~~v~~vD~-~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~------------ 93 (232)
.+.++|=.|++.|. ++..+++.+.+|+.++. +++..+...+.+...+ .++.++.+|+.+...
T Consensus 28 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 105 (280)
T 4da9_A 28 ARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLG--ARVIFLRADLADLSSHQATVDAVVAEF 105 (280)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTT--CCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 56778888876652 55556668899999995 6666666655555544 569999999987642
Q ss_pred CCcceeecccC
Q 047897 94 PQFDLVVANIP 104 (232)
Q Consensus 94 ~~~D~Vi~n~p 104 (232)
+..|++|.|.-
T Consensus 106 g~iD~lvnnAg 116 (280)
T 4da9_A 106 GRIDCLVNNAG 116 (280)
T ss_dssp SCCCEEEEECC
T ss_pred CCCCEEEECCC
Confidence 25788887753
No 335
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=92.33 E-value=0.69 Score=36.42 Aligned_cols=74 Identities=20% Similarity=0.210 Sum_probs=50.7
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCC------------C
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEF------------P 94 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~------------~ 94 (232)
.+.++|=.|++.| .++..+++.+.+|++++.++.-.+.+.+.+...+...++.++.+|+.+... .
T Consensus 31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 110 (279)
T 1xg5_A 31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS 110 (279)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 4567887775544 234444457899999999988777666666555543568899999987531 2
Q ss_pred Ccceeeccc
Q 047897 95 QFDLVVANI 103 (232)
Q Consensus 95 ~~D~Vi~n~ 103 (232)
.+|+||.|.
T Consensus 111 ~iD~vi~~A 119 (279)
T 1xg5_A 111 GVDICINNA 119 (279)
T ss_dssp CCSEEEECC
T ss_pred CCCEEEECC
Confidence 578888764
No 336
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=92.31 E-value=0.46 Score=39.71 Aligned_cols=46 Identities=15% Similarity=0.212 Sum_probs=37.2
Q ss_pred hcCCCCCCEEEEEcCCc-cHhHHHHHh-cCC-eEEEEEcCHHHHHHHHH
Q 047897 25 KSSINPDDTVLEIGPGT-GNLTLKLLE-VSK-KVHAIEIDERMVEILNR 70 (232)
Q Consensus 25 ~~~~~~~~~vLDiG~G~-G~~t~~l~~-~~~-~v~~vD~~~~~~~~a~~ 70 (232)
.++++++++||-+|+|. |.++..+++ .+. +|+++|.+++-++.+++
T Consensus 180 ~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~ 228 (398)
T 1kol_A 180 TAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA 228 (398)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred HcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH
Confidence 45778999999999866 677777777 566 79999999998888764
No 337
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=92.29 E-value=0.67 Score=36.84 Aligned_cols=74 Identities=15% Similarity=0.125 Sum_probs=52.5
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCC-C------------C
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKT-E------------F 93 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~-~------------~ 93 (232)
.+.++|=.|++.| .++..|++.+.+|++++.++.-.+.+.+.+...+- .++.++.+|+.+. . .
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~~~v~~~~~~~~~~~ 89 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNH-ENVVFHQLDVTDPIATMSSLADFIKTHF 89 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC-CSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-CceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence 4667887776655 24445555789999999998877776666655432 4799999999886 2 1
Q ss_pred CCcceeecccC
Q 047897 94 PQFDLVVANIP 104 (232)
Q Consensus 94 ~~~D~Vi~n~p 104 (232)
+..|++|.|.-
T Consensus 90 g~iD~lv~nAg 100 (311)
T 3o26_A 90 GKLDILVNNAG 100 (311)
T ss_dssp SSCCEEEECCC
T ss_pred CCCCEEEECCc
Confidence 25799998754
No 338
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=92.19 E-value=0.64 Score=36.22 Aligned_cols=72 Identities=15% Similarity=0.233 Sum_probs=49.2
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC-------------C
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE-------------F 93 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~-------------~ 93 (232)
.+.++|=.|++.| .++..+++.+.+|++++.+++..+.+.+.+...+ .++.++.+|+.+.. +
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~~ 81 (260)
T 2qq5_A 4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLG--GQCVPVVCDSSQESEVRSLFEQVDREQQ 81 (260)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS--SEEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcC--CceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 3567777775544 2344445578999999999877766655554444 46889999998742 3
Q ss_pred CCcceeeccc
Q 047897 94 PQFDLVVANI 103 (232)
Q Consensus 94 ~~~D~Vi~n~ 103 (232)
+..|++|.|-
T Consensus 82 g~id~lvnnA 91 (260)
T 2qq5_A 82 GRLDVLVNNA 91 (260)
T ss_dssp TCCCEEEECC
T ss_pred CCceEEEECC
Confidence 3568888876
No 339
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=92.10 E-value=0.88 Score=35.72 Aligned_cols=71 Identities=17% Similarity=0.259 Sum_probs=49.9
Q ss_pred CCCEEEEEcCCccHhHHHH----HhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------C
Q 047897 30 PDDTVLEIGPGTGNLTLKL----LEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------F 93 (232)
Q Consensus 30 ~~~~vLDiG~G~G~~t~~l----~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~ 93 (232)
.+.++|=.|++ |.++..+ ++.+.+|++++.++...+...+.+...+ .++.++.+|+.+.. +
T Consensus 30 ~~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 106 (272)
T 1yb1_A 30 TGEIVLITGAG-HGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG--AKVHTFVVDCSNREDIYSSAKKVKAEI 106 (272)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcC--CeEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 45678877765 4444444 4478999999999887776666655444 46999999998742 1
Q ss_pred CCcceeeccc
Q 047897 94 PQFDLVVANI 103 (232)
Q Consensus 94 ~~~D~Vi~n~ 103 (232)
+.+|.||.|.
T Consensus 107 g~iD~li~~A 116 (272)
T 1yb1_A 107 GDVSILVNNA 116 (272)
T ss_dssp CCCSEEEECC
T ss_pred CCCcEEEECC
Confidence 3578888775
No 340
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=92.06 E-value=0.44 Score=39.52 Aligned_cols=47 Identities=26% Similarity=0.333 Sum_probs=38.0
Q ss_pred HhcCCCCCCEEEEEcCCc-cHhHHHHHh-cCCeEEEEEcCHHHHHHHHH
Q 047897 24 RKSSINPDDTVLEIGPGT-GNLTLKLLE-VSKKVHAIEIDERMVEILNR 70 (232)
Q Consensus 24 ~~~~~~~~~~vLDiG~G~-G~~t~~l~~-~~~~v~~vD~~~~~~~~a~~ 70 (232)
..++++++++||-+|+|. |.++..+++ .+.+|++++.+++-.+.+++
T Consensus 188 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~ 236 (369)
T 1uuf_A 188 RHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA 236 (369)
T ss_dssp HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 445778999999999875 666777776 67889999999988888775
No 341
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=91.93 E-value=0.51 Score=35.84 Aligned_cols=66 Identities=23% Similarity=0.260 Sum_probs=44.8
Q ss_pred EEEEcCCccHhHHHHHh----cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------CCCcceeeccc
Q 047897 34 VLEIGPGTGNLTLKLLE----VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------FPQFDLVVANI 103 (232)
Q Consensus 34 vLDiG~G~G~~t~~l~~----~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------~~~~D~Vi~n~ 103 (232)
|+=+|+ |.++..+++ .+.+|+++|.+++.++.+.+.. ++.++.+|+.+.. ....|.|++..
T Consensus 3 iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~-------~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 73 (218)
T 3l4b_C 3 VIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL-------KATIIHGDGSHKEILRDAEVSKNDVVVILT 73 (218)
T ss_dssp EEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS-------SSEEEESCTTSHHHHHHHTCCTTCEEEECC
T ss_pred EEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc-------CCeEEEcCCCCHHHHHhcCcccCCEEEEec
Confidence 455564 666666555 6789999999998877654432 3668999997642 34678888766
Q ss_pred Ccccc
Q 047897 104 PYGIS 108 (232)
Q Consensus 104 p~~~~ 108 (232)
+-...
T Consensus 74 ~~d~~ 78 (218)
T 3l4b_C 74 PRDEV 78 (218)
T ss_dssp SCHHH
T ss_pred CCcHH
Confidence 64433
No 342
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=91.88 E-value=0.78 Score=35.72 Aligned_cols=72 Identities=15% Similarity=0.184 Sum_probs=49.8
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------C-
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------F- 93 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~- 93 (232)
.+.++|=.|++.| .++..+++.+.+|++++.+++..+.+.+.+...+ .++.++.+|+.+.. +
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG--FKVEASVCDLSSRSERQELMNTVANHFH 85 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4567887776544 2444455578999999999887766555554433 46889999998752 1
Q ss_pred CCcceeeccc
Q 047897 94 PQFDLVVANI 103 (232)
Q Consensus 94 ~~~D~Vi~n~ 103 (232)
...|++|.|.
T Consensus 86 g~id~lv~~A 95 (260)
T 2ae2_A 86 GKLNILVNNA 95 (260)
T ss_dssp TCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 4678888774
No 343
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=91.73 E-value=0.44 Score=37.70 Aligned_cols=72 Identities=19% Similarity=0.281 Sum_probs=52.8
Q ss_pred CCCEEEEEcCCccH---hHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------CC
Q 047897 30 PDDTVLEIGPGTGN---LTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------FP 94 (232)
Q Consensus 30 ~~~~vLDiG~G~G~---~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~~ 94 (232)
.+.++|=.|++.|. ++..+++.+.+|+.++.+++..+.+.+.+...+ .++.++.+|+.+.. ++
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 108 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVG--GKALPIRCDVTQPDQVRGMLDQMTGELG 108 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 46788888876552 555556688999999999887777776666554 46889999998753 12
Q ss_pred Ccceeeccc
Q 047897 95 QFDLVVANI 103 (232)
Q Consensus 95 ~~D~Vi~n~ 103 (232)
..|++|.|.
T Consensus 109 ~iD~lvnnA 117 (276)
T 3r1i_A 109 GIDIAVCNA 117 (276)
T ss_dssp CCSEEEECC
T ss_pred CCCEEEECC
Confidence 578888774
No 344
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=91.70 E-value=1 Score=35.46 Aligned_cols=72 Identities=15% Similarity=0.204 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------CC
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------FP 94 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~~ 94 (232)
.+.++|=.|++.| .++..|++.+.+|++++.+++-.+.+.+.+...+ .++.++.+|+.+.. ++
T Consensus 21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 98 (277)
T 2rhc_B 21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG--VEADGRTCDVRSVPEIEALVAAVVERYG 98 (277)
T ss_dssp TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 4567888887654 2444455578999999999877766555555444 46889999997642 12
Q ss_pred Ccceeeccc
Q 047897 95 QFDLVVANI 103 (232)
Q Consensus 95 ~~D~Vi~n~ 103 (232)
..|++|.|.
T Consensus 99 ~iD~lv~~A 107 (277)
T 2rhc_B 99 PVDVLVNNA 107 (277)
T ss_dssp SCSEEEECC
T ss_pred CCCEEEECC
Confidence 578888774
No 345
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=91.69 E-value=2.2 Score=29.20 Aligned_cols=66 Identities=18% Similarity=0.216 Sum_probs=42.1
Q ss_pred CCEEEEEcCCccHhHHHHHh----cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCC------CCCCcceee
Q 047897 31 DDTVLEIGPGTGNLTLKLLE----VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKT------EFPQFDLVV 100 (232)
Q Consensus 31 ~~~vLDiG~G~G~~t~~l~~----~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~------~~~~~D~Vi 100 (232)
+.+|+=+|+ |.++..+++ .+.+|+++|.+++.++.+++.. .+.++.+|..+. .....|.|+
T Consensus 4 ~m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~-------~~~~~~~d~~~~~~l~~~~~~~~d~vi 74 (140)
T 1lss_A 4 GMYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-------DALVINGDCTKIKTLEDAGIEDADMYI 74 (140)
T ss_dssp -CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-------SSEEEESCTTSHHHHHHTTTTTCSEEE
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc-------CcEEEEcCCCCHHHHHHcCcccCCEEE
Confidence 356777876 555544443 6789999999988766554321 255677877542 134678888
Q ss_pred cccCc
Q 047897 101 ANIPY 105 (232)
Q Consensus 101 ~n~p~ 105 (232)
...|.
T Consensus 75 ~~~~~ 79 (140)
T 1lss_A 75 AVTGK 79 (140)
T ss_dssp ECCSC
T ss_pred EeeCC
Confidence 76654
No 346
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=91.68 E-value=0.78 Score=36.07 Aligned_cols=72 Identities=19% Similarity=0.299 Sum_probs=50.9
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcC------------HHHHHHHHHHHhhcCCCccEEEEEcCCCCCC--
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEID------------ERMVEILNRRAADSGFHDRLNVISKDALKTE-- 92 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~------------~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~-- 92 (232)
.+.++|=.|++.| .++..|++.+.+|+++|.+ ++.++...+.....+ .++.++.+|+.+..
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v 89 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG--SRIVARQADVRDRESL 89 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT--CCEEEEECCTTCHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcC--CeEEEEeCCCCCHHHH
Confidence 4678888887655 2555566689999999987 555655555555544 57999999998753
Q ss_pred ----------CCCcceeeccc
Q 047897 93 ----------FPQFDLVVANI 103 (232)
Q Consensus 93 ----------~~~~D~Vi~n~ 103 (232)
++..|++|.|-
T Consensus 90 ~~~~~~~~~~~g~id~lv~nA 110 (278)
T 3sx2_A 90 SAALQAGLDELGRLDIVVANA 110 (278)
T ss_dssp HHHHHHHHHHHCCCCEEEECC
T ss_pred HHHHHHHHHHcCCCCEEEECC
Confidence 12579998874
No 347
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=91.67 E-value=0.45 Score=37.86 Aligned_cols=69 Identities=12% Similarity=0.145 Sum_probs=51.0
Q ss_pred CCCEEEEEcCCccH---hHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------CC
Q 047897 30 PDDTVLEIGPGTGN---LTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------FP 94 (232)
Q Consensus 30 ~~~~vLDiG~G~G~---~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~~ 94 (232)
+|+++|=-|.+.|. ++..|++.+++|+.+|.+++.++.+.+.+ + .++..+.+|+.+.. +.
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g--~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 102 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---G--GGAVGIQADSANLAELDRLYEKVKAEAG 102 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C--TTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---C--CCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 57788888987773 56666668999999999998777655444 3 46778899998753 23
Q ss_pred Ccceeeccc
Q 047897 95 QFDLVVANI 103 (232)
Q Consensus 95 ~~D~Vi~n~ 103 (232)
..|++|.|-
T Consensus 103 ~iDiLVNNA 111 (273)
T 4fgs_A 103 RIDVLFVNA 111 (273)
T ss_dssp CEEEEEECC
T ss_pred CCCEEEECC
Confidence 568888774
No 348
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=91.57 E-value=0.58 Score=38.37 Aligned_cols=47 Identities=23% Similarity=0.338 Sum_probs=37.5
Q ss_pred HhcCCCCCCEEEEEcCCc-cHhHHHHHh-cCCeEEEEEcCHHHHHHHHH
Q 047897 24 RKSSINPDDTVLEIGPGT-GNLTLKLLE-VSKKVHAIEIDERMVEILNR 70 (232)
Q Consensus 24 ~~~~~~~~~~vLDiG~G~-G~~t~~l~~-~~~~v~~vD~~~~~~~~a~~ 70 (232)
+..+++++++||-+|+|. |.++..+++ .+.+|+++|.+++-.+.+++
T Consensus 162 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~ 210 (352)
T 1e3j_A 162 RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN 210 (352)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH
Confidence 456788999999999864 666666666 67789999999988887764
No 349
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=91.55 E-value=1 Score=35.30 Aligned_cols=72 Identities=14% Similarity=0.206 Sum_probs=51.6
Q ss_pred CCCEEEEEcCCccH---hHHHHHhcCCeEEEEEcCHHHHHHHHHHHhh-cCCCccEEEEEcCCCCCCC------------
Q 047897 30 PDDTVLEIGPGTGN---LTLKLLEVSKKVHAIEIDERMVEILNRRAAD-SGFHDRLNVISKDALKTEF------------ 93 (232)
Q Consensus 30 ~~~~vLDiG~G~G~---~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~~~~~~~D~~~~~~------------ 93 (232)
.+.++|=.|++.|. ++..+++.+.+|+.++.+++-++.+.+.+.. .+ .++.++.+|+.+...
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 96 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFG--TDVHTVAIDLAEPDAPAELARRAAEAF 96 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC--CCEEEEECCTTSTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 46678877776552 4555555789999999998877766665543 33 469999999988642
Q ss_pred CCcceeeccc
Q 047897 94 PQFDLVVANI 103 (232)
Q Consensus 94 ~~~D~Vi~n~ 103 (232)
+..|++|.|.
T Consensus 97 g~id~lv~nA 106 (266)
T 4egf_A 97 GGLDVLVNNA 106 (266)
T ss_dssp TSCSEEEEEC
T ss_pred CCCCEEEECC
Confidence 2578888774
No 350
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=91.51 E-value=0.85 Score=35.93 Aligned_cols=72 Identities=26% Similarity=0.344 Sum_probs=51.2
Q ss_pred CCCEEEEEcCCccH---hHHHHHhcCCeEEEEEcC------------HHHHHHHHHHHhhcCCCccEEEEEcCCCCCC--
Q 047897 30 PDDTVLEIGPGTGN---LTLKLLEVSKKVHAIEID------------ERMVEILNRRAADSGFHDRLNVISKDALKTE-- 92 (232)
Q Consensus 30 ~~~~vLDiG~G~G~---~t~~l~~~~~~v~~vD~~------------~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~-- 92 (232)
.+.++|=.|++.|. ++..|++.+.+|+.+|.+ .+.++.+...+...+ .++.++.+|+.+..
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v 86 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG--RKAYTAEVDVRDRAAV 86 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT--SCEEEEECCTTCHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC--CceEEEEccCCCHHHH
Confidence 46788888876652 555566689999999987 666666655555544 57999999998753
Q ss_pred ----------CCCcceeeccc
Q 047897 93 ----------FPQFDLVVANI 103 (232)
Q Consensus 93 ----------~~~~D~Vi~n~ 103 (232)
++..|++|.|-
T Consensus 87 ~~~~~~~~~~~g~id~lv~nA 107 (287)
T 3pxx_A 87 SRELANAVAEFGKLDVVVANA 107 (287)
T ss_dssp HHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHcCCCCEEEECC
Confidence 12578888874
No 351
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=91.46 E-value=0.49 Score=38.81 Aligned_cols=50 Identities=20% Similarity=0.249 Sum_probs=39.4
Q ss_pred HHHhcCCCCCCEEEEEcCCc-cHhHHHHHh-cCC-eEEEEEcCHHHHHHHHHH
Q 047897 22 IVRKSSINPDDTVLEIGPGT-GNLTLKLLE-VSK-KVHAIEIDERMVEILNRR 71 (232)
Q Consensus 22 i~~~~~~~~~~~vLDiG~G~-G~~t~~l~~-~~~-~v~~vD~~~~~~~~a~~~ 71 (232)
.++...++++++||=+|+|. |.++..+++ .+. +|+++|.+++-.+.+++.
T Consensus 158 al~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l 210 (352)
T 3fpc_A 158 GAELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEY 210 (352)
T ss_dssp HHHHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHH
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHh
Confidence 34667788999999999875 667777776 566 899999999888877664
No 352
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=91.45 E-value=0.88 Score=35.95 Aligned_cols=72 Identities=15% Similarity=0.243 Sum_probs=51.2
Q ss_pred CCCEEEEEcCCccH---hHHHHHhcCCeEEEEEcC----------------HHHHHHHHHHHhhcCCCccEEEEEcCCCC
Q 047897 30 PDDTVLEIGPGTGN---LTLKLLEVSKKVHAIEID----------------ERMVEILNRRAADSGFHDRLNVISKDALK 90 (232)
Q Consensus 30 ~~~~vLDiG~G~G~---~t~~l~~~~~~v~~vD~~----------------~~~~~~a~~~~~~~~~~~~~~~~~~D~~~ 90 (232)
.+.++|=.|++.|. ++..+++.+.+|+++|.+ .+.++...+.....+ .++.++.+|+.+
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~ 87 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHN--RRIVTAEVDVRD 87 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTT--CCEEEEECCTTC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcC--CceEEEEcCCCC
Confidence 46788888887663 555666689999999987 555555555555444 579999999987
Q ss_pred CC------------CCCcceeeccc
Q 047897 91 TE------------FPQFDLVVANI 103 (232)
Q Consensus 91 ~~------------~~~~D~Vi~n~ 103 (232)
.. ++..|++|.|.
T Consensus 88 ~~~v~~~~~~~~~~~g~id~lv~nA 112 (286)
T 3uve_A 88 YDALKAAVDSGVEQLGRLDIIVANA 112 (286)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECC
Confidence 52 12578888874
No 353
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=91.41 E-value=0.92 Score=35.65 Aligned_cols=72 Identities=18% Similarity=0.212 Sum_probs=50.2
Q ss_pred CCCEEEEEcCCccH---hHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------C-
Q 047897 30 PDDTVLEIGPGTGN---LTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------F- 93 (232)
Q Consensus 30 ~~~~vLDiG~G~G~---~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~- 93 (232)
.+.++|=.|++.|. ++..+++.+.+|++++.+++.++.+.+.+...+ .++.++.+|+.+.. +
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 97 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG--LNVEGSVCDLLSRTERDKLMQTVAHVFD 97 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 46678888865542 444455578999999999877766555554444 46889999997642 2
Q ss_pred CCcceeeccc
Q 047897 94 PQFDLVVANI 103 (232)
Q Consensus 94 ~~~D~Vi~n~ 103 (232)
...|++|.|.
T Consensus 98 g~id~lv~nA 107 (273)
T 1ae1_A 98 GKLNILVNNA 107 (273)
T ss_dssp SCCCEEEECC
T ss_pred CCCcEEEECC
Confidence 4678888874
No 354
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=91.35 E-value=0.38 Score=39.44 Aligned_cols=73 Identities=16% Similarity=0.241 Sum_probs=49.3
Q ss_pred HHHhcCCCCCCEEEEEcCCc-cHhHHHHHh-cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCCCccee
Q 047897 22 IVRKSSINPDDTVLEIGPGT-GNLTLKLLE-VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLV 99 (232)
Q Consensus 22 i~~~~~~~~~~~vLDiG~G~-G~~t~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~V 99 (232)
.+...+++++++||-+|+|. |.++..+++ .+.+|++++.+++-.+.+++ .|. +. ++ .|...+.. .+|+|
T Consensus 168 ~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa-~~--v~-~~~~~~~~-~~D~v 238 (348)
T 3two_A 168 PLKFSKVTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS----MGV-KH--FY-TDPKQCKE-ELDFI 238 (348)
T ss_dssp HHHHTTCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH----TTC-SE--EE-SSGGGCCS-CEEEE
T ss_pred HHHhcCCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh----cCC-Ce--ec-CCHHHHhc-CCCEE
Confidence 34556788999999999865 666777776 67899999999988887765 332 22 22 34332222 68888
Q ss_pred eccc
Q 047897 100 VANI 103 (232)
Q Consensus 100 i~n~ 103 (232)
+-..
T Consensus 239 id~~ 242 (348)
T 3two_A 239 ISTI 242 (348)
T ss_dssp EECC
T ss_pred EECC
Confidence 8543
No 355
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=91.32 E-value=1 Score=35.24 Aligned_cols=74 Identities=18% Similarity=0.104 Sum_probs=52.3
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------CC
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------FP 94 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~~ 94 (232)
.+.++|=.|++.| .++..+++.+.+|+.++.+++-.+.+.+.+....-..++.++.+|+.+.. ++
T Consensus 7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 86 (265)
T 3lf2_A 7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLG 86 (265)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 4667888887765 25555666889999999998887776666654211135899999998753 12
Q ss_pred Ccceeeccc
Q 047897 95 QFDLVVANI 103 (232)
Q Consensus 95 ~~D~Vi~n~ 103 (232)
..|++|.|.
T Consensus 87 ~id~lvnnA 95 (265)
T 3lf2_A 87 CASILVNNA 95 (265)
T ss_dssp SCSEEEECC
T ss_pred CCCEEEECC
Confidence 578888875
No 356
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=91.31 E-value=0.96 Score=35.66 Aligned_cols=72 Identities=21% Similarity=0.286 Sum_probs=52.1
Q ss_pred CCCEEEEEcCCccH---hHHHHHhcCCeEEEEEc-------------CHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC-
Q 047897 30 PDDTVLEIGPGTGN---LTLKLLEVSKKVHAIEI-------------DERMVEILNRRAADSGFHDRLNVISKDALKTE- 92 (232)
Q Consensus 30 ~~~~vLDiG~G~G~---~t~~l~~~~~~v~~vD~-------------~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~- 92 (232)
.+.++|=.|++.|. ++..+++.+.+|+++|. +++.++.+.+.....+ .++.++.+|+.+..
T Consensus 14 ~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~ 91 (280)
T 3pgx_A 14 QGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQG--RKALTRVLDVRDDAA 91 (280)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT--CCEEEEECCTTCHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHH
Confidence 56788888877663 55566668999999998 6666666666665554 56899999998753
Q ss_pred -----------CCCcceeeccc
Q 047897 93 -----------FPQFDLVVANI 103 (232)
Q Consensus 93 -----------~~~~D~Vi~n~ 103 (232)
++..|++|.|-
T Consensus 92 v~~~~~~~~~~~g~id~lvnnA 113 (280)
T 3pgx_A 92 LRELVADGMEQFGRLDVVVANA 113 (280)
T ss_dssp HHHHHHHHHHHHCCCCEEEECC
T ss_pred HHHHHHHHHHHcCCCCEEEECC
Confidence 12578888874
No 357
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=91.29 E-value=0.52 Score=38.90 Aligned_cols=48 Identities=15% Similarity=0.192 Sum_probs=38.2
Q ss_pred HhcCCCCCCEEEEEcCCc-cHhHHHHHh-cCCeEEEEEcCHHHHHHHHHH
Q 047897 24 RKSSINPDDTVLEIGPGT-GNLTLKLLE-VSKKVHAIEIDERMVEILNRR 71 (232)
Q Consensus 24 ~~~~~~~~~~vLDiG~G~-G~~t~~l~~-~~~~v~~vD~~~~~~~~a~~~ 71 (232)
+..+++++++||=+|+|. |.++..+++ .+.+|++++.+++-.+.+++.
T Consensus 183 ~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l 232 (363)
T 3uog_A 183 EKGHLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFAL 232 (363)
T ss_dssp TTTCCCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHc
Confidence 456778999999999765 666666666 678999999999888877653
No 358
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=91.28 E-value=0.96 Score=35.42 Aligned_cols=74 Identities=18% Similarity=0.215 Sum_probs=51.1
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC--------CCCcce
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE--------FPQFDL 98 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~--------~~~~D~ 98 (232)
.+.++|=.|++.| .++..+++.+.+|+.++.+++-.+.+.+.+...+....+.++.+|..+.. ++..|+
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~ 88 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDI 88 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCE
Confidence 4567887776554 24455555789999999998877766666554432246888999987642 236788
Q ss_pred eeccc
Q 047897 99 VVANI 103 (232)
Q Consensus 99 Vi~n~ 103 (232)
+|.|.
T Consensus 89 lv~nA 93 (267)
T 3t4x_A 89 LINNL 93 (267)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 88774
No 359
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=91.25 E-value=0.93 Score=36.21 Aligned_cols=72 Identities=18% Similarity=0.260 Sum_probs=51.0
Q ss_pred CCCEEEEEcCCccH---hHHHHHhcCCeEEEEEcC------------HHHHHHHHHHHhhcCCCccEEEEEcCCCCCC--
Q 047897 30 PDDTVLEIGPGTGN---LTLKLLEVSKKVHAIEID------------ERMVEILNRRAADSGFHDRLNVISKDALKTE-- 92 (232)
Q Consensus 30 ~~~~vLDiG~G~G~---~t~~l~~~~~~v~~vD~~------------~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~-- 92 (232)
.+.++|=.|++.|. ++..+++.+.+|+++|.+ ++.++.+.+.+...+ .++.++.+|+.+..
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v 104 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG--RRIIASQVDVRDFDAM 104 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHH
Confidence 46788888877663 555666689999999987 555555555555544 57999999998753
Q ss_pred ----------CCCcceeeccc
Q 047897 93 ----------FPQFDLVVANI 103 (232)
Q Consensus 93 ----------~~~~D~Vi~n~ 103 (232)
++..|++|.|-
T Consensus 105 ~~~~~~~~~~~g~iD~lv~nA 125 (299)
T 3t7c_A 105 QAAVDDGVTQLGRLDIVLANA 125 (299)
T ss_dssp HHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHhCCCCEEEECC
Confidence 12578888764
No 360
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=91.23 E-value=0.9 Score=32.26 Aligned_cols=67 Identities=19% Similarity=0.232 Sum_probs=43.4
Q ss_pred CEEEEEcCCccHhHHHHHh----cCCeEEEEEcC-HHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------CCCcceee
Q 047897 32 DTVLEIGPGTGNLTLKLLE----VSKKVHAIEID-ERMVEILNRRAADSGFHDRLNVISKDALKTE------FPQFDLVV 100 (232)
Q Consensus 32 ~~vLDiG~G~G~~t~~l~~----~~~~v~~vD~~-~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------~~~~D~Vi 100 (232)
.+|+=+|+ |.++..+++ .+.+|+.+|.+ ++.++...+... ..+.++.+|+.+.. ....|.|+
T Consensus 4 ~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~-----~~~~~i~gd~~~~~~l~~a~i~~ad~vi 76 (153)
T 1id1_A 4 DHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG-----DNADVIPGDSNDSSVLKKAGIDRCRAIL 76 (153)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC-----TTCEEEESCTTSHHHHHHHTTTTCSEEE
T ss_pred CcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc-----CCCeEEEcCCCCHHHHHHcChhhCCEEE
Confidence 45666775 666665554 67899999998 455544443321 34789999987642 34678888
Q ss_pred cccCc
Q 047897 101 ANIPY 105 (232)
Q Consensus 101 ~n~p~ 105 (232)
+..+.
T Consensus 77 ~~~~~ 81 (153)
T 1id1_A 77 ALSDN 81 (153)
T ss_dssp ECSSC
T ss_pred EecCC
Confidence 76553
No 361
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=91.14 E-value=1.3 Score=34.12 Aligned_cols=72 Identities=19% Similarity=0.291 Sum_probs=53.4
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------CC
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------FP 94 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~~ 94 (232)
.+.++|=.|++.| .++..+++.+.+|+.++.+++..+.+.+.+...+ .++.++.+|+.+.. ++
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g 85 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG--GTAISVAVDVSDPESAKAMADRTLAEFG 85 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4668888887655 2555556678999999999988877777766544 57899999998753 12
Q ss_pred Ccceeeccc
Q 047897 95 QFDLVVANI 103 (232)
Q Consensus 95 ~~D~Vi~n~ 103 (232)
..|.+|.|.
T Consensus 86 ~id~li~~A 94 (253)
T 3qiv_A 86 GIDYLVNNA 94 (253)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 578888875
No 362
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=91.11 E-value=0.87 Score=35.39 Aligned_cols=72 Identities=21% Similarity=0.206 Sum_probs=53.2
Q ss_pred CCCEEEEEcCCccH---hHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCC-----------CC
Q 047897 30 PDDTVLEIGPGTGN---LTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEF-----------PQ 95 (232)
Q Consensus 30 ~~~~vLDiG~G~G~---~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~-----------~~ 95 (232)
.+.++|=.|++.|. ++..+++.+.+|++++.+++.++.+.+.+...+ .++.++.+|+.+... +.
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~g~ 83 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG--GRIVARSLDARNEDEVTAFLNAADAHAP 83 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECcCCCHHHHHHHHHHHHhhCC
Confidence 46678888877662 555566688999999999888777777776554 579999999987531 25
Q ss_pred cceeeccc
Q 047897 96 FDLVVANI 103 (232)
Q Consensus 96 ~D~Vi~n~ 103 (232)
.|++|.|.
T Consensus 84 id~lv~nA 91 (252)
T 3h7a_A 84 LEVTIFNV 91 (252)
T ss_dssp EEEEEECC
T ss_pred ceEEEECC
Confidence 68888764
No 363
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=90.97 E-value=1.3 Score=34.53 Aligned_cols=73 Identities=16% Similarity=0.225 Sum_probs=52.9
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCC------------C
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEF------------P 94 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~------------~ 94 (232)
.+.++|=.|++.| .++..+++.+.+|++++.+++.++.+.+.+...+ .++.++.+|+.+... +
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g 105 (262)
T 3rkr_A 28 SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG--GEAESHACDLSHSDAIAAFATGVLAAHG 105 (262)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC--CceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence 5678888886554 2444455578999999999988877777776554 579999999987531 2
Q ss_pred CcceeecccC
Q 047897 95 QFDLVVANIP 104 (232)
Q Consensus 95 ~~D~Vi~n~p 104 (232)
..|.+|.|.-
T Consensus 106 ~id~lv~~Ag 115 (262)
T 3rkr_A 106 RCDVLVNNAG 115 (262)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 5788887753
No 364
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=90.85 E-value=0.49 Score=37.33 Aligned_cols=72 Identities=17% Similarity=0.166 Sum_probs=52.1
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------CC
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------FP 94 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~~ 94 (232)
.+.++|=.|++.| .++..|++.+.+|+.++.+++-.+.+.+.+...+ .++.++.+|+.+.. ++
T Consensus 25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 102 (271)
T 4ibo_A 25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVG--HDAEAVAFDVTSESEIIEAFARLDEQGI 102 (271)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT--CCEEECCCCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence 4667887776554 2455555578999999999988777777666555 46899999998753 12
Q ss_pred Ccceeeccc
Q 047897 95 QFDLVVANI 103 (232)
Q Consensus 95 ~~D~Vi~n~ 103 (232)
..|++|.|-
T Consensus 103 ~iD~lv~nA 111 (271)
T 4ibo_A 103 DVDILVNNA 111 (271)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 578888774
No 365
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=90.67 E-value=1.5 Score=33.98 Aligned_cols=70 Identities=19% Similarity=0.363 Sum_probs=47.9
Q ss_pred CEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------CCCc
Q 047897 32 DTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------FPQF 96 (232)
Q Consensus 32 ~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~~~~ 96 (232)
.++|=.|++.| .++..|++.+.+|++++.+++-.+.+.+.+...+ .++.++.+|+.+.. ++..
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 80 (256)
T 1geg_A 3 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAG--GHAVAVKVDVSDRDQVFAAVEQARKTLGGF 80 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 46777776544 2444455578999999999877666555554444 46889999998752 1257
Q ss_pred ceeeccc
Q 047897 97 DLVVANI 103 (232)
Q Consensus 97 D~Vi~n~ 103 (232)
|++|.|.
T Consensus 81 d~lv~nA 87 (256)
T 1geg_A 81 DVIVNNA 87 (256)
T ss_dssp CEEEECC
T ss_pred CEEEECC
Confidence 8888875
No 366
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=90.63 E-value=1.4 Score=35.10 Aligned_cols=74 Identities=24% Similarity=0.268 Sum_probs=51.1
Q ss_pred CCCEEEEEcCCccH---hHHHHHhcCC---eEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCC----------
Q 047897 30 PDDTVLEIGPGTGN---LTLKLLEVSK---KVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEF---------- 93 (232)
Q Consensus 30 ~~~~vLDiG~G~G~---~t~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~---------- 93 (232)
.+.++|=.|++.|. ++..+++.+. +|+.++.+.+.++.+.+.+.......++.++.+|+.+...
T Consensus 32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 111 (287)
T 3rku_A 32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ 111 (287)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 46788888876552 3444444455 9999999998887777666543222578999999987531
Q ss_pred --CCcceeeccc
Q 047897 94 --PQFDLVVANI 103 (232)
Q Consensus 94 --~~~D~Vi~n~ 103 (232)
+..|++|.|-
T Consensus 112 ~~g~iD~lVnnA 123 (287)
T 3rku_A 112 EFKDIDILVNNA 123 (287)
T ss_dssp GGCSCCEEEECC
T ss_pred hcCCCCEEEECC
Confidence 2578888774
No 367
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=90.61 E-value=1.2 Score=35.37 Aligned_cols=72 Identities=14% Similarity=0.153 Sum_probs=49.6
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------CC
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------FP 94 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~~ 94 (232)
.+.++|=.|++.| .++..|++.+.+|++++.+++..+.+.+.+...+ .++.++.+|+.+.. ++
T Consensus 33 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 110 (291)
T 3cxt_A 33 KGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAG--INAHGYVCDVTDEDGIQAMVAQIESEVG 110 (291)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4667888886544 2444455578999999999877766555555444 46888999998752 12
Q ss_pred Ccceeeccc
Q 047897 95 QFDLVVANI 103 (232)
Q Consensus 95 ~~D~Vi~n~ 103 (232)
..|++|.|.
T Consensus 111 ~iD~lvnnA 119 (291)
T 3cxt_A 111 IIDILVNNA 119 (291)
T ss_dssp CCCEEEECC
T ss_pred CCcEEEECC
Confidence 478888774
No 368
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=90.59 E-value=1.5 Score=34.81 Aligned_cols=61 Identities=10% Similarity=-0.006 Sum_probs=42.2
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEE-cCHHHHHHHHHHHh-hcCCCccEEEEEcCCCCCC
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIE-IDERMVEILNRRAA-DSGFHDRLNVISKDALKTE 92 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD-~~~~~~~~a~~~~~-~~~~~~~~~~~~~D~~~~~ 92 (232)
.+.++|=.|++.| .++..|++.+.+|+.++ .+++.++.+.+.+. ..+ .++.++.+|+.+..
T Consensus 8 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~ 73 (291)
T 1e7w_A 8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP--NSAITVQADLSNVA 73 (291)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST--TCEEEEECCCSSSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcC--CeeEEEEeecCCcc
Confidence 3567777776554 24444555789999999 99877766655554 333 46899999998765
No 369
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=90.46 E-value=0.42 Score=35.55 Aligned_cols=47 Identities=17% Similarity=0.343 Sum_probs=34.7
Q ss_pred HhcCCCCCCEEEEEcC--CccHhHHHHHh-cCCeEEEEEcCHHHHHHHHH
Q 047897 24 RKSSINPDDTVLEIGP--GTGNLTLKLLE-VSKKVHAIEIDERMVEILNR 70 (232)
Q Consensus 24 ~~~~~~~~~~vLDiG~--G~G~~t~~l~~-~~~~v~~vD~~~~~~~~a~~ 70 (232)
+..++.++++||..|+ |.|..+..++. .+.+|+++|.+++..+.+++
T Consensus 32 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~ 81 (198)
T 1pqw_A 32 EVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR 81 (198)
T ss_dssp TTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT
T ss_pred HHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 3456788999999995 45655555555 67899999999887766543
No 370
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=90.45 E-value=1.3 Score=34.89 Aligned_cols=72 Identities=15% Similarity=0.254 Sum_probs=50.8
Q ss_pred CCCEEEEEcCCccH---hHHHHHhcCCeEEEEEc-------------CHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC-
Q 047897 30 PDDTVLEIGPGTGN---LTLKLLEVSKKVHAIEI-------------DERMVEILNRRAADSGFHDRLNVISKDALKTE- 92 (232)
Q Consensus 30 ~~~~vLDiG~G~G~---~t~~l~~~~~~v~~vD~-------------~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~- 92 (232)
.+.++|=.|++.|. ++..+++.+.+|+++|. +.+.++...+.....+ .++.++.+|+.+..
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~ 87 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN--RRIVAAVVDTRDFDR 87 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC--CeEEEEECCCCCHHH
Confidence 46788888876652 55556668999999998 5666665555555444 56999999998753
Q ss_pred -----------CCCcceeeccc
Q 047897 93 -----------FPQFDLVVANI 103 (232)
Q Consensus 93 -----------~~~~D~Vi~n~ 103 (232)
++..|++|.|-
T Consensus 88 v~~~~~~~~~~~g~id~lvnnA 109 (277)
T 3tsc_A 88 LRKVVDDGVAALGRLDIIVANA 109 (277)
T ss_dssp HHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHcCCCCEEEECC
Confidence 13578888874
No 371
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=90.37 E-value=0.77 Score=36.15 Aligned_cols=72 Identities=15% Similarity=0.150 Sum_probs=51.3
Q ss_pred CCCEEEEEcCCccH---hHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------CC
Q 047897 30 PDDTVLEIGPGTGN---LTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------FP 94 (232)
Q Consensus 30 ~~~~vLDiG~G~G~---~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~~ 94 (232)
.+.++|=.|++.|. ++..|++.+.+|++++.+++..+...+.+...+ .++.++.+|+.+.. ++
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (270)
T 3ftp_A 27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAG--LEGRGAVLNVNDATAVDALVESTLKEFG 104 (270)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHT--CCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 46677777765542 445555578999999999988777776666555 45888999998752 12
Q ss_pred Ccceeeccc
Q 047897 95 QFDLVVANI 103 (232)
Q Consensus 95 ~~D~Vi~n~ 103 (232)
..|++|.|-
T Consensus 105 ~iD~lvnnA 113 (270)
T 3ftp_A 105 ALNVLVNNA 113 (270)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 578888774
No 372
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=90.36 E-value=0.86 Score=35.59 Aligned_cols=74 Identities=16% Similarity=0.098 Sum_probs=54.7
Q ss_pred CCCEEEEEcC----CccH-hHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------
Q 047897 30 PDDTVLEIGP----GTGN-LTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------ 92 (232)
Q Consensus 30 ~~~~vLDiG~----G~G~-~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------ 92 (232)
+|+++|=-|+ |.|. ++..|++.+++|+.++.+++..+.+.+.+...+- .++.++.+|+.+..
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQ-PEAHLYQIDVQSDEEVINGFEQIGKD 83 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTC-SSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 5778888885 3443 6666777899999999999888887777766543 46889999997752
Q ss_pred CCCcceeecccC
Q 047897 93 FPQFDLVVANIP 104 (232)
Q Consensus 93 ~~~~D~Vi~n~p 104 (232)
+...|+++.|..
T Consensus 84 ~G~iD~lvnnAg 95 (256)
T 4fs3_A 84 VGNIDGVYHSIA 95 (256)
T ss_dssp HCCCSEEEECCC
T ss_pred hCCCCEEEeccc
Confidence 235788887754
No 373
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=90.21 E-value=0.46 Score=40.82 Aligned_cols=61 Identities=20% Similarity=0.318 Sum_probs=43.2
Q ss_pred CEEEEEcCCccHhHHHHHh----cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------CCCcceeec
Q 047897 32 DTVLEIGPGTGNLTLKLLE----VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------FPQFDLVVA 101 (232)
Q Consensus 32 ~~vLDiG~G~G~~t~~l~~----~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------~~~~D~Vi~ 101 (232)
.+|+=+||| ..+..+++ .+..|+.+|.|++.++.+.+.+ .+..++||+.+.. .+..|++++
T Consensus 4 M~iiI~G~G--~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-------~~~~i~Gd~~~~~~L~~Agi~~ad~~ia 74 (461)
T 4g65_A 4 MKIIILGAG--QVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-------DLRVVNGHASHPDVLHEAGAQDADMLVA 74 (461)
T ss_dssp EEEEEECCS--HHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-------SCEEEESCTTCHHHHHHHTTTTCSEEEE
T ss_pred CEEEEECCC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-------CcEEEEEcCCCHHHHHhcCCCcCCEEEE
Confidence 456666665 45555554 5788999999999988777654 3678999998753 236676665
No 374
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=90.18 E-value=0.58 Score=38.70 Aligned_cols=47 Identities=15% Similarity=0.268 Sum_probs=36.7
Q ss_pred HhcCCCCCCEEEEEcCCc-cHhHHHHHh-cCC-eEEEEEcCHHHHHHHHH
Q 047897 24 RKSSINPDDTVLEIGPGT-GNLTLKLLE-VSK-KVHAIEIDERMVEILNR 70 (232)
Q Consensus 24 ~~~~~~~~~~vLDiG~G~-G~~t~~l~~-~~~-~v~~vD~~~~~~~~a~~ 70 (232)
+..+++++++||-+|+|. |.++..+++ .+. +|+++|.+++-.+.+++
T Consensus 186 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~ 235 (374)
T 1cdo_A 186 NTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV 235 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence 456778899999999764 566666666 566 89999999988887764
No 375
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=90.05 E-value=0.84 Score=37.52 Aligned_cols=49 Identities=20% Similarity=0.331 Sum_probs=39.3
Q ss_pred HHhcCCCCCCEEEEEcCCc-cHhHHHHHh-cCCe-EEEEEcCHHHHHHHHHH
Q 047897 23 VRKSSINPDDTVLEIGPGT-GNLTLKLLE-VSKK-VHAIEIDERMVEILNRR 71 (232)
Q Consensus 23 ~~~~~~~~~~~vLDiG~G~-G~~t~~l~~-~~~~-v~~vD~~~~~~~~a~~~ 71 (232)
++..++++|++||=+|+|. |.++..+++ .+.+ |+++|.+++-.+.+++.
T Consensus 172 l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l 223 (363)
T 3m6i_A 172 LQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI 223 (363)
T ss_dssp HHHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH
T ss_pred HHHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence 3566788999999999865 666667776 5665 99999999999998876
No 376
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=90.03 E-value=1.7 Score=34.55 Aligned_cols=72 Identities=11% Similarity=0.111 Sum_probs=51.4
Q ss_pred CCCEEEEEcCCc----c-HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------
Q 047897 30 PDDTVLEIGPGT----G-NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------ 92 (232)
Q Consensus 30 ~~~~vLDiG~G~----G-~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------ 92 (232)
.+.++|=.|++. | .++..+++.+.+|+.++.++...+.+.+..... +++.++.+|+.+..
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEEL---GAFVAGHCDVADAASIDAVFETLEKK 106 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHH---TCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc---CCceEEECCCCCHHHHHHHHHHHHHh
Confidence 567889888763 2 356666678999999999977666666555443 35889999998752
Q ss_pred CCCcceeecccC
Q 047897 93 FPQFDLVVANIP 104 (232)
Q Consensus 93 ~~~~D~Vi~n~p 104 (232)
++..|++|.|.-
T Consensus 107 ~g~iD~lVnnAG 118 (293)
T 3grk_A 107 WGKLDFLVHAIG 118 (293)
T ss_dssp TSCCSEEEECCC
T ss_pred cCCCCEEEECCc
Confidence 235788888753
No 377
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=89.93 E-value=1.8 Score=34.55 Aligned_cols=72 Identities=13% Similarity=0.136 Sum_probs=54.2
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCC------------C
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEF------------P 94 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~------------~ 94 (232)
.+.++|=.|++.| .++..+++.+.+|++++.+++.++.+.+.+...+ .++.++.+|+.+... +
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG--FDAHGVVCDVRHLDEMVRLADEAFRLLG 107 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 5678888887765 2555556688999999999988887777776655 469999999987531 2
Q ss_pred Ccceeeccc
Q 047897 95 QFDLVVANI 103 (232)
Q Consensus 95 ~~D~Vi~n~ 103 (232)
..|++|.|.
T Consensus 108 ~id~lvnnA 116 (301)
T 3tjr_A 108 GVDVVFSNA 116 (301)
T ss_dssp SCSEEEECC
T ss_pred CCCEEEECC
Confidence 578888874
No 378
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=89.92 E-value=0.46 Score=38.75 Aligned_cols=49 Identities=20% Similarity=0.276 Sum_probs=39.7
Q ss_pred HHhcCCCCCCEEEEEcCC--ccHhHHHHHh-cCCeEEEEEcCHHHHHHHHHH
Q 047897 23 VRKSSINPDDTVLEIGPG--TGNLTLKLLE-VSKKVHAIEIDERMVEILNRR 71 (232)
Q Consensus 23 ~~~~~~~~~~~vLDiG~G--~G~~t~~l~~-~~~~v~~vD~~~~~~~~a~~~ 71 (232)
.+.+.++++++||-+|+| .|..+..+++ .+.+|++++.+++-.+.+++.
T Consensus 137 ~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l 188 (340)
T 3gms_A 137 TETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRL 188 (340)
T ss_dssp HTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH
T ss_pred HHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhC
Confidence 356778899999999987 5677777776 688999999999888877763
No 379
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=89.84 E-value=0.68 Score=38.11 Aligned_cols=47 Identities=17% Similarity=0.215 Sum_probs=37.2
Q ss_pred HhcCCCCCCEEEEEcCCc-cHhHHHHHh-cCCeEEEEEcCHHHHHHHHH
Q 047897 24 RKSSINPDDTVLEIGPGT-GNLTLKLLE-VSKKVHAIEIDERMVEILNR 70 (232)
Q Consensus 24 ~~~~~~~~~~vLDiG~G~-G~~t~~l~~-~~~~v~~vD~~~~~~~~a~~ 70 (232)
..++++++++||-+|+|. |.++..+++ .+.+|++++.+++-.+.+++
T Consensus 173 ~~~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~ 221 (360)
T 1piw_A 173 VRNGCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMK 221 (360)
T ss_dssp HHTTCSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 446788999999999854 566666666 67899999999888887765
No 380
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=89.83 E-value=0.59 Score=38.67 Aligned_cols=47 Identities=11% Similarity=0.156 Sum_probs=36.7
Q ss_pred HhcCCCCCCEEEEEcCCc-cHhHHHHHh-cCC-eEEEEEcCHHHHHHHHH
Q 047897 24 RKSSINPDDTVLEIGPGT-GNLTLKLLE-VSK-KVHAIEIDERMVEILNR 70 (232)
Q Consensus 24 ~~~~~~~~~~vLDiG~G~-G~~t~~l~~-~~~-~v~~vD~~~~~~~~a~~ 70 (232)
+..+++++++||=+|+|. |.++..+++ .+. +|+++|.+++-.+.+++
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 234 (373)
T 1p0f_A 185 NTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE 234 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH
Confidence 456788999999999864 566666666 566 89999999988887764
No 381
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=89.82 E-value=0.6 Score=39.47 Aligned_cols=65 Identities=17% Similarity=0.200 Sum_probs=45.3
Q ss_pred CCEEEEEcCCccHhHHHHHh----cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------CCCcceee
Q 047897 31 DDTVLEIGPGTGNLTLKLLE----VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------FPQFDLVV 100 (232)
Q Consensus 31 ~~~vLDiG~G~G~~t~~l~~----~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------~~~~D~Vi 100 (232)
+.+|+=+|+|. ++..+++ .+..|+++|.|++.++.+++ . .+.++.||+.+.. ....|.|+
T Consensus 4 ~~~viIiG~Gr--~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~----g~~vi~GDat~~~~L~~agi~~A~~vi 73 (413)
T 3l9w_A 4 GMRVIIAGFGR--FGQITGRLLLSSGVKMVVLDHDPDHIETLRK----F----GMKVFYGDATRMDLLESAGAAKAEVLI 73 (413)
T ss_dssp CCSEEEECCSH--HHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----T----TCCCEESCTTCHHHHHHTTTTTCSEEE
T ss_pred CCeEEEECCCH--HHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----C----CCeEEEcCCCCHHHHHhcCCCccCEEE
Confidence 45677788755 4444433 68899999999999887763 2 2568999998752 34677777
Q ss_pred cccCc
Q 047897 101 ANIPY 105 (232)
Q Consensus 101 ~n~p~ 105 (232)
+.++-
T Consensus 74 v~~~~ 78 (413)
T 3l9w_A 74 NAIDD 78 (413)
T ss_dssp ECCSS
T ss_pred ECCCC
Confidence 65553
No 382
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=89.80 E-value=0.68 Score=33.98 Aligned_cols=66 Identities=32% Similarity=0.369 Sum_probs=42.5
Q ss_pred CCEEEEEcCCc-cH-hHHHHHhc-CCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCC-------CCCCcceee
Q 047897 31 DDTVLEIGPGT-GN-LTLKLLEV-SKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKT-------EFPQFDLVV 100 (232)
Q Consensus 31 ~~~vLDiG~G~-G~-~t~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~-------~~~~~D~Vi 100 (232)
+++|+=+|+|. |. ++..|.+. +.+|+++|.+++.++.+++ .| +.++.+|..+. .....|.|+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~----~g----~~~~~gd~~~~~~l~~~~~~~~ad~vi 110 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS----EG----RNVISGDATDPDFWERILDTGHVKLVL 110 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH----TT----CCEEECCTTCHHHHHTBCSCCCCCEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH----CC----CCEEEcCCCCHHHHHhccCCCCCCEEE
Confidence 55788888754 22 22333336 8899999999987766543 22 45677887542 234678888
Q ss_pred cccC
Q 047897 101 ANIP 104 (232)
Q Consensus 101 ~n~p 104 (232)
...|
T Consensus 111 ~~~~ 114 (183)
T 3c85_A 111 LAMP 114 (183)
T ss_dssp ECCS
T ss_pred EeCC
Confidence 7655
No 383
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=89.70 E-value=1.9 Score=33.45 Aligned_cols=74 Identities=26% Similarity=0.293 Sum_probs=54.0
Q ss_pred CCCEEEEEcC-CccH---hHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------C
Q 047897 30 PDDTVLEIGP-GTGN---LTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------F 93 (232)
Q Consensus 30 ~~~~vLDiG~-G~G~---~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~ 93 (232)
.+.++|=.|+ |.|. ++..+++.+.+|+.++.+++-.+.+.+.+...+- .++.++.+|+.+.. +
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 99 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGL-GRVEAVVCDVTSTEAVDALITQTVEKA 99 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCS-SCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCC-CceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence 4667888887 5542 6666777899999999999887777776654432 57999999998753 1
Q ss_pred CCcceeecccC
Q 047897 94 PQFDLVVANIP 104 (232)
Q Consensus 94 ~~~D~Vi~n~p 104 (232)
+..|++|.|.-
T Consensus 100 g~id~li~~Ag 110 (266)
T 3o38_A 100 GRLDVLVNNAG 110 (266)
T ss_dssp SCCCEEEECCC
T ss_pred CCCcEEEECCC
Confidence 25688888743
No 384
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=89.66 E-value=0.68 Score=38.29 Aligned_cols=47 Identities=11% Similarity=0.203 Sum_probs=36.5
Q ss_pred HhcCCCCCCEEEEEcCCc-cHhHHHHHh-cCC-eEEEEEcCHHHHHHHHH
Q 047897 24 RKSSINPDDTVLEIGPGT-GNLTLKLLE-VSK-KVHAIEIDERMVEILNR 70 (232)
Q Consensus 24 ~~~~~~~~~~vLDiG~G~-G~~t~~l~~-~~~-~v~~vD~~~~~~~~a~~ 70 (232)
+..+++++++||-+|+|. |.++..+++ .+. +|+++|.+++-.+.+++
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~ 234 (374)
T 2jhf_A 185 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE 234 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 456778899999999765 566666666 566 89999999988887754
No 385
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=89.66 E-value=1.6 Score=33.92 Aligned_cols=72 Identities=11% Similarity=0.190 Sum_probs=52.7
Q ss_pred CCCEEEEEcCCccH---hHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCC------------C
Q 047897 30 PDDTVLEIGPGTGN---LTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEF------------P 94 (232)
Q Consensus 30 ~~~~vLDiG~G~G~---~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~------------~ 94 (232)
.+.++|=.|++.|. ++..+++.+.+|+.++.+++-.+.+.+.+...+ .++.++.+|+.+... +
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 88 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAG--GKAIGLECNVTDEQHREAVIKAALDQFG 88 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 46678877776552 455555578999999999988877777766555 579999999987531 2
Q ss_pred Ccceeeccc
Q 047897 95 QFDLVVANI 103 (232)
Q Consensus 95 ~~D~Vi~n~ 103 (232)
..|+++.|.
T Consensus 89 ~id~lv~nA 97 (256)
T 3gaf_A 89 KITVLVNNA 97 (256)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 578888774
No 386
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=89.60 E-value=1.9 Score=34.92 Aligned_cols=61 Identities=10% Similarity=-0.027 Sum_probs=41.7
Q ss_pred CCCEEEEEcCCccH---hHHHHHhcCCeEEEEE-cCHHHHHHHHHHHh-hcCCCccEEEEEcCCCCCC
Q 047897 30 PDDTVLEIGPGTGN---LTLKLLEVSKKVHAIE-IDERMVEILNRRAA-DSGFHDRLNVISKDALKTE 92 (232)
Q Consensus 30 ~~~~vLDiG~G~G~---~t~~l~~~~~~v~~vD-~~~~~~~~a~~~~~-~~~~~~~~~~~~~D~~~~~ 92 (232)
.+.++|=.|++.|. ++..|++.+.+|++++ .+++.++.+.+.+. ..+ .++.++.+|+.+..
T Consensus 45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~d~~ 110 (328)
T 2qhx_A 45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP--NSAITVQADLSNVA 110 (328)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST--TCEEEEECCCSSSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcC--CeEEEEEeeCCCch
Confidence 35677766655442 4444445789999999 99877766655554 333 46899999998765
No 387
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=89.53 E-value=0.73 Score=38.07 Aligned_cols=79 Identities=16% Similarity=0.201 Sum_probs=53.0
Q ss_pred CCEEEEEcCCccHhHHHHHh---cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC-----CCCcceeecc
Q 047897 31 DDTVLEIGPGTGNLTLKLLE---VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE-----FPQFDLVVAN 102 (232)
Q Consensus 31 ~~~vLDiG~G~G~~t~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~-----~~~~D~Vi~n 102 (232)
..+|+=+|| |..+..+++ ....|+..|++.+-++.+++ .+..+..|+.+.. ....|+|++-
T Consensus 16 ~mkilvlGa--G~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~~---------~~~~~~~d~~d~~~l~~~~~~~DvVi~~ 84 (365)
T 3abi_A 16 HMKVLILGA--GNIGRAIAWDLKDEFDVYIGDVNNENLEKVKE---------FATPLKVDASNFDKLVEVMKEFELVIGA 84 (365)
T ss_dssp CCEEEEECC--SHHHHHHHHHHTTTSEEEEEESCHHHHHHHTT---------TSEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred ccEEEEECC--CHHHHHHHHHHhcCCCeEEEEcCHHHHHHHhc---------cCCcEEEecCCHHHHHHHHhCCCEEEEe
Confidence 357999998 444444443 56789999999877765532 3455677876543 1367999988
Q ss_pred cCcccchHHHHHHhcCCC
Q 047897 103 IPYGISSPLVAKLVYGTK 120 (232)
Q Consensus 103 ~p~~~~~~~l~~~~~~~~ 120 (232)
+|+....+++...++...
T Consensus 85 ~p~~~~~~v~~~~~~~g~ 102 (365)
T 3abi_A 85 LPGFLGFKSIKAAIKSKV 102 (365)
T ss_dssp CCGGGHHHHHHHHHHHTC
T ss_pred cCCcccchHHHHHHhcCc
Confidence 887777666666555443
No 388
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=89.47 E-value=2 Score=34.08 Aligned_cols=72 Identities=15% Similarity=0.255 Sum_probs=48.1
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhc-CCCccEEEEEcCCCCCC------------C
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADS-GFHDRLNVISKDALKTE------------F 93 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~-~~~~~~~~~~~D~~~~~------------~ 93 (232)
.+.++|=.|++.| .++..+++.+.+|++++.+++..+...+.+... + .++.++.+|+.+.. +
T Consensus 25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 102 (302)
T 1w6u_A 25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG--NKVHAIQCDVRDPDMVQNTVSELIKVA 102 (302)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS--SCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC--CceEEEEeCCCCHHHHHHHHHHHHHHc
Confidence 3567887776544 244444557899999999987666555544332 3 46999999998642 1
Q ss_pred CCcceeeccc
Q 047897 94 PQFDLVVANI 103 (232)
Q Consensus 94 ~~~D~Vi~n~ 103 (232)
+.+|+||.|.
T Consensus 103 g~id~li~~A 112 (302)
T 1w6u_A 103 GHPNIVINNA 112 (302)
T ss_dssp CSCSEEEECC
T ss_pred CCCCEEEECC
Confidence 2568888764
No 389
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=89.46 E-value=1.4 Score=34.20 Aligned_cols=72 Identities=14% Similarity=0.257 Sum_probs=52.0
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------CC
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------FP 94 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~~ 94 (232)
.+.++|=.|++.| .++..+++.+.+|+.++.+++..+.+.+.+...+ .++.++.+|+.+.. ++
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 82 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFP--GQILTVQMDVRNTDDIQKMIEQIDEKFG 82 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCST--TCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4567787776554 2455555578999999999988887777765544 57999999998752 12
Q ss_pred Ccceeeccc
Q 047897 95 QFDLVVANI 103 (232)
Q Consensus 95 ~~D~Vi~n~ 103 (232)
..|++|.|.
T Consensus 83 ~id~lv~nA 91 (257)
T 3imf_A 83 RIDILINNA 91 (257)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 578888774
No 390
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=89.45 E-value=0.7 Score=38.18 Aligned_cols=48 Identities=10% Similarity=0.214 Sum_probs=37.0
Q ss_pred HhcCCCCCCEEEEEcCCc-cHhHHHHHh-cCC-eEEEEEcCHHHHHHHHHH
Q 047897 24 RKSSINPDDTVLEIGPGT-GNLTLKLLE-VSK-KVHAIEIDERMVEILNRR 71 (232)
Q Consensus 24 ~~~~~~~~~~vLDiG~G~-G~~t~~l~~-~~~-~v~~vD~~~~~~~~a~~~ 71 (232)
+..+++++++||-+|+|. |.++..+++ .+. +|+++|.+++-.+.+++.
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~l 234 (373)
T 2fzw_A 184 NTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF 234 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc
Confidence 456778899999999764 556666666 566 899999999888887653
No 391
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=89.41 E-value=0.73 Score=38.12 Aligned_cols=47 Identities=17% Similarity=0.257 Sum_probs=36.4
Q ss_pred HhcCCCCCCEEEEEcCCc-cHhHHHHHh-cCC-eEEEEEcCHHHHHHHHH
Q 047897 24 RKSSINPDDTVLEIGPGT-GNLTLKLLE-VSK-KVHAIEIDERMVEILNR 70 (232)
Q Consensus 24 ~~~~~~~~~~vLDiG~G~-G~~t~~l~~-~~~-~v~~vD~~~~~~~~a~~ 70 (232)
+..++.++++||=+|+|. |.++..+++ .+. +|+++|.+++-.+.+++
T Consensus 189 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 238 (376)
T 1e3i_A 189 NTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA 238 (376)
T ss_dssp TTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 456778899999999764 566666666 566 89999999988877754
No 392
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=89.40 E-value=1.8 Score=33.56 Aligned_cols=69 Identities=16% Similarity=0.226 Sum_probs=48.9
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------CC
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------FP 94 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~~ 94 (232)
.+.++|=.|++.| .++..+++.+.+|+.++.+++-.+...+.+ + .++.++.+|+.+.. ++
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g 81 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---G--PAAYAVQMDVTRQDSIDAAIAATVEHAG 81 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C--TTEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C--CCceEEEeeCCCHHHHHHHHHHHHHHcC
Confidence 4668888886655 245555568899999999987766555444 2 46889999998753 12
Q ss_pred Ccceeeccc
Q 047897 95 QFDLVVANI 103 (232)
Q Consensus 95 ~~D~Vi~n~ 103 (232)
..|++|.|.
T Consensus 82 ~id~lv~~A 90 (259)
T 4e6p_A 82 GLDILVNNA 90 (259)
T ss_dssp SCCEEEECC
T ss_pred CCCEEEECC
Confidence 578888874
No 393
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=89.39 E-value=1.7 Score=34.00 Aligned_cols=72 Identities=18% Similarity=0.213 Sum_probs=52.2
Q ss_pred CCCEEEEEcCCccH---hHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------CC
Q 047897 30 PDDTVLEIGPGTGN---LTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------FP 94 (232)
Q Consensus 30 ~~~~vLDiG~G~G~---~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~~ 94 (232)
.+.++|=.|++.|. ++..|++.+.+|+.++.+++.++.+.+.+...+ .++.++.+|+.+.. ++
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 80 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAG--GTALAQVLDVTDRHSVAAFAQAAVDTWG 80 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 35677777776552 455555688999999999988877777776654 57889999998753 12
Q ss_pred Ccceeeccc
Q 047897 95 QFDLVVANI 103 (232)
Q Consensus 95 ~~D~Vi~n~ 103 (232)
..|++|.|.
T Consensus 81 ~iD~lVnnA 89 (264)
T 3tfo_A 81 RIDVLVNNA 89 (264)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 578888774
No 394
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=89.34 E-value=1.3 Score=35.64 Aligned_cols=72 Identities=18% Similarity=0.314 Sum_probs=49.5
Q ss_pred CCCEEEEEcCCccH---hHHHHHhcCCeEEEEEcC------------HHHHHHHHHHHhhcCCCccEEEEEcCCCCCC--
Q 047897 30 PDDTVLEIGPGTGN---LTLKLLEVSKKVHAIEID------------ERMVEILNRRAADSGFHDRLNVISKDALKTE-- 92 (232)
Q Consensus 30 ~~~~vLDiG~G~G~---~t~~l~~~~~~v~~vD~~------------~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~-- 92 (232)
.+.++|=.|++.|. ++..|++.+.+|+++|.+ .+.++...+.....+ .++.++.+|+.+..
T Consensus 45 ~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v 122 (317)
T 3oec_A 45 QGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQG--RRIIARQADVRDLASL 122 (317)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHH
Confidence 46678888876552 555566689999999986 555555555554444 56999999998753
Q ss_pred ----------CCCcceeeccc
Q 047897 93 ----------FPQFDLVVANI 103 (232)
Q Consensus 93 ----------~~~~D~Vi~n~ 103 (232)
++..|++|.|-
T Consensus 123 ~~~~~~~~~~~g~iD~lVnnA 143 (317)
T 3oec_A 123 QAVVDEALAEFGHIDILVSNV 143 (317)
T ss_dssp HHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHcCCCCEEEECC
Confidence 12578888874
No 395
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=89.24 E-value=2.2 Score=33.77 Aligned_cols=72 Identities=26% Similarity=0.338 Sum_probs=52.9
Q ss_pred CCCEEEEEcCCccH---hHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------CC
Q 047897 30 PDDTVLEIGPGTGN---LTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------FP 94 (232)
Q Consensus 30 ~~~~vLDiG~G~G~---~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~~ 94 (232)
.+.++|=.|++.|. ++..+++.+.+|+.++.+++.++.+.+.+...+ .++.++.+|+.+.. ++
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAG--GQAIALEADVSDELQMRNAVRDLVLKFG 104 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTT--CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 46678888876652 555556688999999999988777777665544 57899999998752 12
Q ss_pred Ccceeeccc
Q 047897 95 QFDLVVANI 103 (232)
Q Consensus 95 ~~D~Vi~n~ 103 (232)
..|++|.|.
T Consensus 105 ~iD~lVnnA 113 (283)
T 3v8b_A 105 HLDIVVANA 113 (283)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 578888764
No 396
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=89.10 E-value=1.1 Score=36.97 Aligned_cols=49 Identities=24% Similarity=0.252 Sum_probs=38.6
Q ss_pred HHhcCCCCCCEEEEEcCCc-cHhHHHHHh-cCC-eEEEEEcCHHHHHHHHHH
Q 047897 23 VRKSSINPDDTVLEIGPGT-GNLTLKLLE-VSK-KVHAIEIDERMVEILNRR 71 (232)
Q Consensus 23 ~~~~~~~~~~~vLDiG~G~-G~~t~~l~~-~~~-~v~~vD~~~~~~~~a~~~ 71 (232)
++...++++++||=+|+|. |.++..+++ .+. +|+++|.+++-.+.+++.
T Consensus 175 l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l 226 (370)
T 4ej6_A 175 VDLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV 226 (370)
T ss_dssp HHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc
Confidence 3567788999999999865 666666666 566 899999999988877764
No 397
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=89.10 E-value=1.7 Score=35.20 Aligned_cols=58 Identities=12% Similarity=0.165 Sum_probs=46.0
Q ss_pred CEEEEEcCCccHhHHHHHh-cCCeEEEEEcCHHHHHHHHHHHhhcCC--CccEEEEEcCCCC
Q 047897 32 DTVLEIGPGTGNLTLKLLE-VSKKVHAIEIDERMVEILNRRAADSGF--HDRLNVISKDALK 90 (232)
Q Consensus 32 ~~vLDiG~G~G~~t~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~~~D~~~ 90 (232)
..|+++|||.=.....+.. .+.+++=+| .|..++..++.+...+. .++..++.+|+.+
T Consensus 104 ~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d 164 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ 164 (310)
T ss_dssp CEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS
T ss_pred CeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh
Confidence 4699999999888777664 346888888 69999999999875432 3688999999987
No 398
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=89.10 E-value=2.6 Score=32.91 Aligned_cols=63 Identities=10% Similarity=0.091 Sum_probs=47.3
Q ss_pred CEEEEEcCCccHhHHHHHh----cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCCCCcceeecccC
Q 047897 32 DTVLEIGPGTGNLTLKLLE----VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIP 104 (232)
Q Consensus 32 ~~vLDiG~G~G~~t~~l~~----~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vi~n~p 104 (232)
.+||=.| + |.++..+++ .+.+|++++.++.-.+.... .+++++.+|..++....+|.||....
T Consensus 6 ~~ilVtG-a-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--------~~~~~~~~D~~d~~~~~~d~vi~~a~ 72 (286)
T 3ius_A 6 GTLLSFG-H-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA--------SGAEPLLWPGEEPSLDGVTHLLISTA 72 (286)
T ss_dssp CEEEEET-C-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH--------TTEEEEESSSSCCCCTTCCEEEECCC
T ss_pred CcEEEEC-C-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh--------CCCeEEEecccccccCCCCEEEECCC
Confidence 5789999 4 888777766 67899999998865443321 35899999998876557898887654
No 399
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=89.05 E-value=1.4 Score=36.00 Aligned_cols=48 Identities=31% Similarity=0.648 Sum_probs=37.5
Q ss_pred HHhcCCCCCCEEEEEcCC--ccHhHHHHHh-c-CCeEEEEEcCHHHHHHHHH
Q 047897 23 VRKSSINPDDTVLEIGPG--TGNLTLKLLE-V-SKKVHAIEIDERMVEILNR 70 (232)
Q Consensus 23 ~~~~~~~~~~~vLDiG~G--~G~~t~~l~~-~-~~~v~~vD~~~~~~~~a~~ 70 (232)
+...++.++++||-+|+| .|..+..+++ . +.+|+++|.+++..+.+++
T Consensus 163 l~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~ 214 (347)
T 1jvb_A 163 VRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR 214 (347)
T ss_dssp HHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH
T ss_pred HHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 345678899999999997 4555656655 6 8999999999988887754
No 400
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=89.04 E-value=0.96 Score=36.66 Aligned_cols=46 Identities=15% Similarity=0.191 Sum_probs=36.0
Q ss_pred HhcCCCCCCEEEEEcC--CccHhHHHHHh-cCCeEEEEEcCHHHHHHHH
Q 047897 24 RKSSINPDDTVLEIGP--GTGNLTLKLLE-VSKKVHAIEIDERMVEILN 69 (232)
Q Consensus 24 ~~~~~~~~~~vLDiG~--G~G~~t~~l~~-~~~~v~~vD~~~~~~~~a~ 69 (232)
+..++.++++||-.|+ |.|..+..++. .+.+|+++|.+++..+.++
T Consensus 139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~ 187 (333)
T 1v3u_A 139 EVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK 187 (333)
T ss_dssp TTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred HhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 4567788999999998 55666666555 6789999999988877763
No 401
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=88.94 E-value=2 Score=33.00 Aligned_cols=70 Identities=20% Similarity=0.251 Sum_probs=49.5
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC--------CCCcce
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE--------FPQFDL 98 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~--------~~~~D~ 98 (232)
++.+||=.|++.| .++..+++.+.+|++++.+++.++...+.+. .++.+..+|..+.. ....|+
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~id~ 87 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK-----DNYTIEVCNLANKEECSNLISKTSNLDI 87 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-----SSEEEEECCTTSHHHHHHHHHTCSCCSE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc-----cCccEEEcCCCCHHHHHHHHHhcCCCCE
Confidence 5678887776655 2445555578999999999887766655542 46889999987642 135788
Q ss_pred eecccC
Q 047897 99 VVANIP 104 (232)
Q Consensus 99 Vi~n~p 104 (232)
+|.|.-
T Consensus 88 li~~Ag 93 (249)
T 3f9i_A 88 LVCNAG 93 (249)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 888753
No 402
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=88.91 E-value=0.9 Score=37.12 Aligned_cols=48 Identities=19% Similarity=0.311 Sum_probs=36.9
Q ss_pred HHhcCCCCCCEEEEEcC--CccHhHHHHHh-cCCeEEEEEcCHHHHHHHHH
Q 047897 23 VRKSSINPDDTVLEIGP--GTGNLTLKLLE-VSKKVHAIEIDERMVEILNR 70 (232)
Q Consensus 23 ~~~~~~~~~~~vLDiG~--G~G~~t~~l~~-~~~~v~~vD~~~~~~~~a~~ 70 (232)
+...++.++++||-+|+ |.|..+..++. .+.+|++++.+++..+.+++
T Consensus 162 l~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~ 212 (347)
T 2hcy_A 162 LKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS 212 (347)
T ss_dssp HHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHH
T ss_pred HHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH
Confidence 34457788999999998 46666666665 67899999999887776654
No 403
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=88.90 E-value=1.4 Score=34.14 Aligned_cols=71 Identities=15% Similarity=0.128 Sum_probs=47.9
Q ss_pred CCCEEEEEcCCccHhHHH----HHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCC------------
Q 047897 30 PDDTVLEIGPGTGNLTLK----LLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEF------------ 93 (232)
Q Consensus 30 ~~~~vLDiG~G~G~~t~~----l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~------------ 93 (232)
.+.++|=.|++ |.++.. |++.+.+|++++.++.-.+...+.+...+ .++.++.+|+.+...
T Consensus 13 ~~k~vlITGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 89 (266)
T 1xq1_A 13 KAKTVLVTGGT-KGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKG--FQVTGSVCDASLRPEREKLMQTVSSMF 89 (266)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeeEEEECCCCCHHHHHHHHHHHHHHh
Confidence 35677766654 444444 44478999999999877666555554443 468899999876421
Q ss_pred -CCcceeeccc
Q 047897 94 -PQFDLVVANI 103 (232)
Q Consensus 94 -~~~D~Vi~n~ 103 (232)
...|.||.|.
T Consensus 90 ~~~id~li~~A 100 (266)
T 1xq1_A 90 GGKLDILINNL 100 (266)
T ss_dssp TTCCSEEEEEC
T ss_pred CCCCcEEEECC
Confidence 4568888764
No 404
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=88.82 E-value=2 Score=33.38 Aligned_cols=74 Identities=11% Similarity=0.099 Sum_probs=52.7
Q ss_pred CCCEEEEEcCC--cc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCC-----------
Q 047897 30 PDDTVLEIGPG--TG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEF----------- 93 (232)
Q Consensus 30 ~~~~vLDiG~G--~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~----------- 93 (232)
.+.++|=.|++ .| .++..+++.+.+|+.++.++...+.+.+.....+- .++.++.+|+.+...
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDR-NDSIILPCDVTNDAEIETCFASIKEQ 84 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSS-CCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCC-CCceEEeCCCCCHHHHHHHHHHHHHH
Confidence 46678888865 33 26666777899999999988777766666655442 368999999987631
Q ss_pred -CCcceeecccC
Q 047897 94 -PQFDLVVANIP 104 (232)
Q Consensus 94 -~~~D~Vi~n~p 104 (232)
+..|.++.|.-
T Consensus 85 ~g~id~li~~Ag 96 (266)
T 3oig_A 85 VGVIHGIAHCIA 96 (266)
T ss_dssp HSCCCEEEECCC
T ss_pred hCCeeEEEEccc
Confidence 25688887753
No 405
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=88.79 E-value=1 Score=35.67 Aligned_cols=73 Identities=18% Similarity=0.199 Sum_probs=48.8
Q ss_pred CCCEEEEEcCCccH---hHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------CC
Q 047897 30 PDDTVLEIGPGTGN---LTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------FP 94 (232)
Q Consensus 30 ~~~~vLDiG~G~G~---~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~~ 94 (232)
.+.++|=.|++.|. ++..+++.+.+|+.++.+++..+.+.+.+...+- ..+.++.+|+.+.. ++
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 110 (281)
T 4dry_A 32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTG-NIVRAVVCDVGDPDQVAALFAAVRAEFA 110 (281)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS-SCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-CeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 46678877765542 4444555789999999998877766666544331 34689999998753 12
Q ss_pred Ccceeeccc
Q 047897 95 QFDLVVANI 103 (232)
Q Consensus 95 ~~D~Vi~n~ 103 (232)
..|++|.|.
T Consensus 111 ~iD~lvnnA 119 (281)
T 4dry_A 111 RLDLLVNNA 119 (281)
T ss_dssp CCSEEEECC
T ss_pred CCCEEEECC
Confidence 568888774
No 406
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=88.75 E-value=1 Score=35.25 Aligned_cols=66 Identities=27% Similarity=0.384 Sum_probs=46.8
Q ss_pred CEEEEEcCCccH---hHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------CCCc
Q 047897 32 DTVLEIGPGTGN---LTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------FPQF 96 (232)
Q Consensus 32 ~~vLDiG~G~G~---~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~~~~ 96 (232)
++||=-|++.|. ++..+++.+++|+.+|.+++..+...+ .+ .++..+.+|+.+.. +...
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~----~~--~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~i 76 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK----ER--PNLFYFHGDVADPLTLKKFVEYAMEKLQRI 76 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT----TC--TTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----hc--CCEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 467777877763 566667789999999999876543322 22 46889999998752 2357
Q ss_pred ceeeccc
Q 047897 97 DLVVANI 103 (232)
Q Consensus 97 D~Vi~n~ 103 (232)
|++|.|-
T Consensus 77 DiLVNNA 83 (247)
T 3ged_A 77 DVLVNNA 83 (247)
T ss_dssp CEEEECC
T ss_pred CEEEECC
Confidence 8888774
No 407
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=88.71 E-value=2.7 Score=32.35 Aligned_cols=71 Identities=23% Similarity=0.287 Sum_probs=48.9
Q ss_pred CCCEEEEEcCCccHhHHH----HHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCC------------
Q 047897 30 PDDTVLEIGPGTGNLTLK----LLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEF------------ 93 (232)
Q Consensus 30 ~~~~vLDiG~G~G~~t~~----l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~------------ 93 (232)
.+.++|=.|++ |.++.. |++.+.+|++++.++...+...+.+...+ .++.++.+|+.+...
T Consensus 12 ~~k~vlItGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (260)
T 3awd_A 12 DNRVAIVTGGA-QNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEG--HDVSSVVMDVTNTESVQNAVRSVHEQE 88 (260)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 45678877765 444444 44478999999999877665555555444 469999999987531
Q ss_pred CCcceeeccc
Q 047897 94 PQFDLVVANI 103 (232)
Q Consensus 94 ~~~D~Vi~n~ 103 (232)
+..|.||.|.
T Consensus 89 ~~id~vi~~A 98 (260)
T 3awd_A 89 GRVDILVACA 98 (260)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 2578888764
No 408
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=88.69 E-value=1.9 Score=33.76 Aligned_cols=71 Identities=13% Similarity=0.056 Sum_probs=47.3
Q ss_pred CCCEEEEEcCCccHhHHH----HHhcCCeEEEEEc-CHHHHHHHHHHHhhc-CCCccEEEEEcCCCCC----CC------
Q 047897 30 PDDTVLEIGPGTGNLTLK----LLEVSKKVHAIEI-DERMVEILNRRAADS-GFHDRLNVISKDALKT----EF------ 93 (232)
Q Consensus 30 ~~~~vLDiG~G~G~~t~~----l~~~~~~v~~vD~-~~~~~~~a~~~~~~~-~~~~~~~~~~~D~~~~----~~------ 93 (232)
.+.++|=.|++ |.++.. |++.+.+|++++. +++..+.+.+.+... + .++.++.+|+.+. ..
T Consensus 10 ~~k~~lVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~ 86 (276)
T 1mxh_A 10 ECPAAVITGGA-RRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARA--GSAVLCKGDLSLSSSLLDCCEDIID 86 (276)
T ss_dssp -CCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST--TCEEEEECCCSSSTTHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcC--CceEEEeccCCCccccHHHHHHHHH
Confidence 35577766655 444444 4447899999999 877666555555433 3 4688999999876 21
Q ss_pred ------CCcceeeccc
Q 047897 94 ------PQFDLVVANI 103 (232)
Q Consensus 94 ------~~~D~Vi~n~ 103 (232)
+..|++|.|-
T Consensus 87 ~~~~~~g~id~lv~nA 102 (276)
T 1mxh_A 87 CSFRAFGRCDVLVNNA 102 (276)
T ss_dssp HHHHHHSCCCEEEECC
T ss_pred HHHHhcCCCCEEEECC
Confidence 1468888774
No 409
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=88.69 E-value=1.7 Score=33.61 Aligned_cols=73 Identities=16% Similarity=0.231 Sum_probs=50.0
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCC--CCCC------------
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDA--LKTE------------ 92 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~--~~~~------------ 92 (232)
.+.++|=.|++.| .++..|++.+.+|+.++.+++-++.+.+.+...+- .++.++.+|+ .+..
T Consensus 11 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (252)
T 3f1l_A 11 NDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETG-RQPQWFILDLLTCTSENCQQLAQRIAVN 89 (252)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS-CCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC-CCceEEEEecccCCHHHHHHHHHHHHHh
Confidence 4678888887655 24555556889999999998877766666544331 3688899998 3321
Q ss_pred CCCcceeeccc
Q 047897 93 FPQFDLVVANI 103 (232)
Q Consensus 93 ~~~~D~Vi~n~ 103 (232)
++..|++|.|.
T Consensus 90 ~g~id~lv~nA 100 (252)
T 3f1l_A 90 YPRLDGVLHNA 100 (252)
T ss_dssp CSCCSEEEECC
T ss_pred CCCCCEEEECC
Confidence 12578888774
No 410
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=88.60 E-value=1.4 Score=35.80 Aligned_cols=47 Identities=19% Similarity=0.396 Sum_probs=36.8
Q ss_pred HhcCCCCCCEEEEEcCC-ccHhHHHHHh-cCCeEEEEEcCHHHHHHHHH
Q 047897 24 RKSSINPDDTVLEIGPG-TGNLTLKLLE-VSKKVHAIEIDERMVEILNR 70 (232)
Q Consensus 24 ~~~~~~~~~~vLDiG~G-~G~~t~~l~~-~~~~v~~vD~~~~~~~~a~~ 70 (232)
....+.++++||-+|+| .|..+..+++ .+.+|++++.+++-.+.+++
T Consensus 158 ~~~~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 206 (339)
T 1rjw_A 158 KVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE 206 (339)
T ss_dssp HHHTCCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 44477889999999985 3666666666 67899999999988887764
No 411
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=88.49 E-value=1.1 Score=36.47 Aligned_cols=44 Identities=14% Similarity=0.232 Sum_probs=35.7
Q ss_pred CCCCCCEEEEEcCCc-cHhHHHHHh-c--CCeEEEEEcCHHHHHHHHHH
Q 047897 27 SINPDDTVLEIGPGT-GNLTLKLLE-V--SKKVHAIEIDERMVEILNRR 71 (232)
Q Consensus 27 ~~~~~~~vLDiG~G~-G~~t~~l~~-~--~~~v~~vD~~~~~~~~a~~~ 71 (232)
++ ++++||-+|+|. |.++..+++ . +.+|++++.+++-.+.+++.
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~l 215 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALEL 215 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHH
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHh
Confidence 67 899999999864 566666666 6 88999999999888887653
No 412
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=88.32 E-value=3.1 Score=32.01 Aligned_cols=72 Identities=17% Similarity=0.250 Sum_probs=50.5
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------CC
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------FP 94 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~~ 94 (232)
.+.++|=.|++.| .++..+++.+.+|++++.+++.++.+.+.+...+ .++.++.+|+.+.. ++
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~g 83 (247)
T 2jah_A 6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAG--AKVHVLELDVADRQGVDAAVASTVEALG 83 (247)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 3567888886654 2444555578999999999887776666555444 46889999998752 12
Q ss_pred Ccceeeccc
Q 047897 95 QFDLVVANI 103 (232)
Q Consensus 95 ~~D~Vi~n~ 103 (232)
..|++|.|.
T Consensus 84 ~id~lv~nA 92 (247)
T 2jah_A 84 GLDILVNNA 92 (247)
T ss_dssp CCSEEEECC
T ss_pred CCCEEEECC
Confidence 578888764
No 413
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=88.31 E-value=1.3 Score=36.02 Aligned_cols=44 Identities=25% Similarity=0.566 Sum_probs=36.2
Q ss_pred CCCCCCEEEEEcCCc-cHhHHHHHh-c-CCeEEEEEcCHHHHHHHHH
Q 047897 27 SINPDDTVLEIGPGT-GNLTLKLLE-V-SKKVHAIEIDERMVEILNR 70 (232)
Q Consensus 27 ~~~~~~~vLDiG~G~-G~~t~~l~~-~-~~~v~~vD~~~~~~~~a~~ 70 (232)
.++++++||=+|+|. |.++..+++ . +.+|+++|.+++-.+.+++
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~ 214 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALARE 214 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence 677899999999865 667777776 4 7899999999998887765
No 414
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=88.25 E-value=0.62 Score=38.64 Aligned_cols=48 Identities=21% Similarity=0.341 Sum_probs=37.2
Q ss_pred HHhcCCCCCCEEEEEcCCc-cHhHHHHHh-cCC-eEEEEEcCHHHHHHHHH
Q 047897 23 VRKSSINPDDTVLEIGPGT-GNLTLKLLE-VSK-KVHAIEIDERMVEILNR 70 (232)
Q Consensus 23 ~~~~~~~~~~~vLDiG~G~-G~~t~~l~~-~~~-~v~~vD~~~~~~~~a~~ 70 (232)
.+...++++++||=+|+|. |.++..+++ .+. +|+++|.+++-++.+++
T Consensus 186 ~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~ 236 (378)
T 3uko_A 186 WNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKK 236 (378)
T ss_dssp HTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHT
T ss_pred HhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 3556788899999999864 666666766 565 89999999988877654
No 415
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=87.93 E-value=1.9 Score=33.23 Aligned_cols=69 Identities=20% Similarity=0.238 Sum_probs=49.2
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------CC
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------FP 94 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~~ 94 (232)
.+.++|=.|++.| .++..+++.+.+|++++.+++..+...+.+. .+..++.+|+.+.. ++
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 82 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG-----DNGKGMALNVTNPESIEAVLKAITDEFG 82 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG-----GGEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-----ccceEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 4667888887655 2555566689999999999887766655553 35778999998753 12
Q ss_pred Ccceeeccc
Q 047897 95 QFDLVVANI 103 (232)
Q Consensus 95 ~~D~Vi~n~ 103 (232)
..|+++.|-
T Consensus 83 ~iD~lv~nA 91 (248)
T 3op4_A 83 GVDILVNNA 91 (248)
T ss_dssp CCSEEEECC
T ss_pred CCCEEEECC
Confidence 578888874
No 416
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=87.89 E-value=0.95 Score=36.72 Aligned_cols=45 Identities=16% Similarity=0.171 Sum_probs=36.7
Q ss_pred HhcCCCCCCEEEEEcC--CccHhHHHHHh-cCCeEEEEEcCHHHHHHH
Q 047897 24 RKSSINPDDTVLEIGP--GTGNLTLKLLE-VSKKVHAIEIDERMVEIL 68 (232)
Q Consensus 24 ~~~~~~~~~~vLDiG~--G~G~~t~~l~~-~~~~v~~vD~~~~~~~~a 68 (232)
+...++++++||-+|+ |.|..+..+++ .+.+|++++.+++-.+.+
T Consensus 143 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~ 190 (336)
T 4b7c_A 143 DVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFL 190 (336)
T ss_dssp HTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 5678889999999998 55667777666 678999999999877766
No 417
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=87.69 E-value=1.6 Score=36.11 Aligned_cols=47 Identities=15% Similarity=0.202 Sum_probs=36.3
Q ss_pred HhcC-CCCCCEEEEEcCCc-cHhHHHHHh-cC-CeEEEEEcCHHHHHHHHH
Q 047897 24 RKSS-INPDDTVLEIGPGT-GNLTLKLLE-VS-KKVHAIEIDERMVEILNR 70 (232)
Q Consensus 24 ~~~~-~~~~~~vLDiG~G~-G~~t~~l~~-~~-~~v~~vD~~~~~~~~a~~ 70 (232)
+.++ ++++++||-+|+|. |.++..+++ .+ .+|++++.+++-.+.+++
T Consensus 188 ~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~ 238 (380)
T 1vj0_A 188 DEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE 238 (380)
T ss_dssp HTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH
T ss_pred HhcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH
Confidence 4566 78899999999653 556666666 56 699999999988887764
No 418
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=87.64 E-value=3.4 Score=32.45 Aligned_cols=74 Identities=16% Similarity=0.176 Sum_probs=52.8
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCC-ccEEEEEcCCCCCC------------C
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFH-DRLNVISKDALKTE------------F 93 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~~~~~~~D~~~~~------------~ 93 (232)
.+.++|=.|++.| .++..+++.+.+|+.++.+++..+.+.+.+...+.. .++.++.+|+.+.. +
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 89 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWH 89 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 4667888887655 255556668899999999998877777766654421 27899999998753 1
Q ss_pred CCcceeeccc
Q 047897 94 PQFDLVVANI 103 (232)
Q Consensus 94 ~~~D~Vi~n~ 103 (232)
+..|++|.|-
T Consensus 90 g~id~lv~nA 99 (281)
T 3svt_A 90 GRLHGVVHCA 99 (281)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 2568888764
No 419
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=87.59 E-value=3.5 Score=31.98 Aligned_cols=72 Identities=18% Similarity=0.287 Sum_probs=50.6
Q ss_pred CCCEEEEEcCCccH---hHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------CC
Q 047897 30 PDDTVLEIGPGTGN---LTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------FP 94 (232)
Q Consensus 30 ~~~~vLDiG~G~G~---~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~~ 94 (232)
.+.++|=.|++.|. ++..+++.+.+|+.++.+++..+.+.+.+...+ .++.++.+|+.+.. ++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (262)
T 1zem_A 6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKG--VEARSYVCDVTSEEAVIGTVDSVVRDFG 83 (262)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT--SCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 45678878876552 444555578999999999887776666655444 46889999997753 12
Q ss_pred Ccceeeccc
Q 047897 95 QFDLVVANI 103 (232)
Q Consensus 95 ~~D~Vi~n~ 103 (232)
..|++|.|.
T Consensus 84 ~id~lv~nA 92 (262)
T 1zem_A 84 KIDFLFNNA 92 (262)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 578888775
No 420
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=87.46 E-value=2 Score=33.84 Aligned_cols=69 Identities=16% Similarity=0.265 Sum_probs=49.0
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------CC
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------FP 94 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~~ 94 (232)
.+.++|=.|++.| .++..+++.+.+|+.++.+++.++...+.. + .++.++.+|+.+.. ++
T Consensus 4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 78 (281)
T 3zv4_A 4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH---G--GNAVGVVGDVRSLQDQKRAAERCLAAFG 78 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---B--TTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc---C--CcEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 4567888887765 355556668899999999987766544432 2 56899999998753 12
Q ss_pred Ccceeeccc
Q 047897 95 QFDLVVANI 103 (232)
Q Consensus 95 ~~D~Vi~n~ 103 (232)
..|++|.|.
T Consensus 79 ~iD~lvnnA 87 (281)
T 3zv4_A 79 KIDTLIPNA 87 (281)
T ss_dssp CCCEEECCC
T ss_pred CCCEEEECC
Confidence 568888774
No 421
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=87.38 E-value=1.5 Score=35.65 Aligned_cols=45 Identities=18% Similarity=0.273 Sum_probs=37.1
Q ss_pred cCCCCCCEEEEEcC--CccHhHHHHHh-cCCeEEEEEcCHHHHHHHHH
Q 047897 26 SSINPDDTVLEIGP--GTGNLTLKLLE-VSKKVHAIEIDERMVEILNR 70 (232)
Q Consensus 26 ~~~~~~~~vLDiG~--G~G~~t~~l~~-~~~~v~~vD~~~~~~~~a~~ 70 (232)
.+++++++||-+|+ |.|..+..+++ .+.+|++++.+++..+.+++
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~ 209 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKA 209 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence 46778999999998 66777777776 67899999999988887764
No 422
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=87.35 E-value=1.1 Score=36.13 Aligned_cols=72 Identities=17% Similarity=0.241 Sum_probs=49.8
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcC----------HHHHHHHHHHHhhcCCCccEEEEEcCCCCCC----
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEID----------ERMVEILNRRAADSGFHDRLNVISKDALKTE---- 92 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~----------~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~---- 92 (232)
.+.++|=.|++.| .++..|++.+.+|+.+|.+ .+..+...+.+...+ .++.++.+|+.+..
T Consensus 26 ~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~ 103 (322)
T 3qlj_A 26 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAG--GEAVADGSNVADWDQAAG 103 (322)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTT--CEEEEECCCTTSHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHH
Confidence 5678888887655 2455555688999999987 555555555555544 57889999998753
Q ss_pred --------CCCcceeeccc
Q 047897 93 --------FPQFDLVVANI 103 (232)
Q Consensus 93 --------~~~~D~Vi~n~ 103 (232)
++..|++|.|-
T Consensus 104 ~~~~~~~~~g~iD~lv~nA 122 (322)
T 3qlj_A 104 LIQTAVETFGGLDVLVNNA 122 (322)
T ss_dssp HHHHHHHHHSCCCEEECCC
T ss_pred HHHHHHHHcCCCCEEEECC
Confidence 12578888774
No 423
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=87.31 E-value=2.7 Score=33.12 Aligned_cols=73 Identities=15% Similarity=0.162 Sum_probs=50.0
Q ss_pred CCCEEEEEcCCccH---hHHHHHhcCCeEEEEEc-CHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------C
Q 047897 30 PDDTVLEIGPGTGN---LTLKLLEVSKKVHAIEI-DERMVEILNRRAADSGFHDRLNVISKDALKTE------------F 93 (232)
Q Consensus 30 ~~~~vLDiG~G~G~---~t~~l~~~~~~v~~vD~-~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~ 93 (232)
.+.++|=.|++.|. ++..+++.+.+|+.++. +++..+...+.+.... ..++.++.+|+.+.. +
T Consensus 24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 102 (281)
T 3v2h_A 24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLS-SGTVLHHPADMTKPSEIADMMAMVADRF 102 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTC-SSCEEEECCCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhcc-CCcEEEEeCCCCCHHHHHHHHHHHHHHC
Confidence 46688888876652 55555668899999998 6666665555554331 157899999998752 2
Q ss_pred CCcceeeccc
Q 047897 94 PQFDLVVANI 103 (232)
Q Consensus 94 ~~~D~Vi~n~ 103 (232)
+..|++|.|-
T Consensus 103 g~iD~lv~nA 112 (281)
T 3v2h_A 103 GGADILVNNA 112 (281)
T ss_dssp SSCSEEEECC
T ss_pred CCCCEEEECC
Confidence 3578888774
No 424
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=86.92 E-value=3.1 Score=32.29 Aligned_cols=73 Identities=15% Similarity=0.184 Sum_probs=51.9
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------CC
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------FP 94 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~~ 94 (232)
.+.++|=.|++.| .++..+++.+.+|+.++.+++-.+.+.+.+...+- .++.++.+|+.+.. ++
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 87 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGS-GKVIGVQTDVSDRAQCDALAGRAVEEFG 87 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSS-SCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCC-CcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 4667777776554 24445555789999999999888777776665442 47999999998753 12
Q ss_pred Ccceeeccc
Q 047897 95 QFDLVVANI 103 (232)
Q Consensus 95 ~~D~Vi~n~ 103 (232)
..|++|.|.
T Consensus 88 ~id~lvnnA 96 (262)
T 3pk0_A 88 GIDVVCANA 96 (262)
T ss_dssp CCSEEEECC
T ss_pred CCCEEEECC
Confidence 578888774
No 425
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=86.80 E-value=1.2 Score=36.20 Aligned_cols=47 Identities=19% Similarity=0.174 Sum_probs=37.1
Q ss_pred HhcCCCCCCEEEEEcC--CccHhHHHHHh-cCCeEEEEEcCHHHHHHHHH
Q 047897 24 RKSSINPDDTVLEIGP--GTGNLTLKLLE-VSKKVHAIEIDERMVEILNR 70 (232)
Q Consensus 24 ~~~~~~~~~~vLDiG~--G~G~~t~~l~~-~~~~v~~vD~~~~~~~~a~~ 70 (232)
+..+++++++||-.|+ |.|..+..+++ .+.+|++++.+++..+.+++
T Consensus 149 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~ 198 (345)
T 2j3h_A 149 EVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKT 198 (345)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred HHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 4567789999999997 56666666666 67899999999887777653
No 426
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=86.61 E-value=3.5 Score=31.77 Aligned_cols=74 Identities=16% Similarity=0.195 Sum_probs=52.2
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCC-ccEEEEEcCCCCCC------------C
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFH-DRLNVISKDALKTE------------F 93 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~~~~~~~D~~~~~------------~ 93 (232)
.+.++|=.|++.| .++..+++.+.+|+.++.+++-++.+.+.+...... .++.++.+|+.+.. +
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKY 85 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhc
Confidence 4567888887665 255556667899999999998877776666544211 46889999998753 1
Q ss_pred CCcceeeccc
Q 047897 94 PQFDLVVANI 103 (232)
Q Consensus 94 ~~~D~Vi~n~ 103 (232)
+..|++|.|.
T Consensus 86 g~iD~lvnnA 95 (250)
T 3nyw_A 86 GAVDILVNAA 95 (250)
T ss_dssp CCEEEEEECC
T ss_pred CCCCEEEECC
Confidence 2578888774
No 427
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=86.61 E-value=1.9 Score=31.21 Aligned_cols=43 Identities=19% Similarity=0.295 Sum_probs=31.4
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCccHhHHHHHh--cCCeEEEEEc
Q 047897 17 RVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLE--VSKKVHAIEI 60 (232)
Q Consensus 17 ~~~~~i~~~~~~~~~~~vLDiG~G~G~~t~~l~~--~~~~v~~vD~ 60 (232)
..++..+......+| -|||+|-|.|..=-.+.+ +..+++++|.
T Consensus 28 ~~L~~a~~~v~~~~G-pVlElGLGNGRTydHLRe~~P~R~I~vfDR 72 (174)
T 3iht_A 28 ACLEHAIAQTAGLSG-PVYELGLGNGRTYHHLRQHVQGREIYVFER 72 (174)
T ss_dssp HHHHHHHHHTTTCCS-CEEEECCTTCHHHHHHHHHCCSSCEEEEES
T ss_pred HHHHHHHHHhcCCCC-ceEEecCCCChhHHHHHHhCCCCcEEEEEe
Confidence 344445555544444 699999999998888877 6789999984
No 428
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=86.61 E-value=3.4 Score=32.24 Aligned_cols=70 Identities=19% Similarity=0.190 Sum_probs=48.3
Q ss_pred CCCEEEEEcCCccH---hHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCC-------CCccee
Q 047897 30 PDDTVLEIGPGTGN---LTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEF-------PQFDLV 99 (232)
Q Consensus 30 ~~~~vLDiG~G~G~---~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~-------~~~D~V 99 (232)
+|+++|=-|.+.|. ++..|++.+.+|+..|.+.. +.+.+.....+ .++..+.+|+.+... ...|++
T Consensus 8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g--~~~~~~~~Dv~d~~~v~~~~~~g~iDiL 83 (247)
T 4hp8_A 8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDG--GNASALLIDFADPLAAKDSFTDAGFDIL 83 (247)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTT--CCEEEEECCTTSTTTTTTSSTTTCCCEE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhC--CcEEEEEccCCCHHHHHHHHHhCCCCEE
Confidence 47778877877763 56666668999999998853 23333444444 568899999987532 257988
Q ss_pred eccc
Q 047897 100 VANI 103 (232)
Q Consensus 100 i~n~ 103 (232)
+.|-
T Consensus 84 VNNA 87 (247)
T 4hp8_A 84 VNNA 87 (247)
T ss_dssp EECC
T ss_pred EECC
Confidence 8773
No 429
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=86.60 E-value=1.9 Score=34.00 Aligned_cols=72 Identities=18% Similarity=0.207 Sum_probs=51.7
Q ss_pred CCCEEEEEcCCccH---hHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCC-----------CC
Q 047897 30 PDDTVLEIGPGTGN---LTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEF-----------PQ 95 (232)
Q Consensus 30 ~~~~vLDiG~G~G~---~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~-----------~~ 95 (232)
.+.++|=.|++.|. ++..+++.+.+|+.++.+++..+.+.+.+...+ .++.++.+|+.+... ..
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~g~ 109 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASG--GTAQELAGDLSEAGAGTDLIERAEAIAP 109 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTT--CCEEEEECCTTSTTHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 46678877766552 455555578999999999877776666665544 579999999987632 25
Q ss_pred cceeeccc
Q 047897 96 FDLVVANI 103 (232)
Q Consensus 96 ~D~Vi~n~ 103 (232)
.|++|.|-
T Consensus 110 iD~lvnnA 117 (275)
T 4imr_A 110 VDILVINA 117 (275)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 78888774
No 430
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=86.51 E-value=1.6 Score=34.70 Aligned_cols=72 Identities=15% Similarity=0.189 Sum_probs=50.2
Q ss_pred CCCEEEEEcCCc----c-HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------
Q 047897 30 PDDTVLEIGPGT----G-NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------ 92 (232)
Q Consensus 30 ~~~~vLDiG~G~----G-~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------ 92 (232)
.+.++|=.|++. | .++..|++.+.+|+.++.++...+.+.+.....+ ++.++.+|+.+..
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLG---VKLTVPCDVSDAESVDNMFKVLAEE 105 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHT---CCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC---CeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 466888888743 3 2566666689999999999876666655554443 4678999998753
Q ss_pred CCCcceeecccC
Q 047897 93 FPQFDLVVANIP 104 (232)
Q Consensus 93 ~~~~D~Vi~n~p 104 (232)
++..|++|.|.-
T Consensus 106 ~g~iD~lVnnAG 117 (296)
T 3k31_A 106 WGSLDFVVHAVA 117 (296)
T ss_dssp HSCCSEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 125788888753
No 431
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=86.33 E-value=2.2 Score=33.51 Aligned_cols=71 Identities=20% Similarity=0.222 Sum_probs=48.5
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------CC
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------FP 94 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~~ 94 (232)
.+.++|=.|++.| .++..+++.+.+|++++.+++..+...+.+... +++.++.+|+.+.. ++
T Consensus 28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (276)
T 2b4q_A 28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY---GDCQAIPADLSSEAGARRLAQALGELSA 104 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTS---SCEEECCCCTTSHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CceEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 4667888886554 244445557899999999987766555555432 26888899987742 12
Q ss_pred Ccceeeccc
Q 047897 95 QFDLVVANI 103 (232)
Q Consensus 95 ~~D~Vi~n~ 103 (232)
..|++|.|.
T Consensus 105 ~iD~lvnnA 113 (276)
T 2b4q_A 105 RLDILVNNA 113 (276)
T ss_dssp CCSEEEECC
T ss_pred CCCEEEECC
Confidence 578888774
No 432
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=86.27 E-value=0.96 Score=36.35 Aligned_cols=47 Identities=21% Similarity=0.314 Sum_probs=37.2
Q ss_pred HhcCCCCCCEEEEEcCCc-cHhHHHHHh-cCCeEEEEEcCHHHHHHHHHH
Q 047897 24 RKSSINPDDTVLEIGPGT-GNLTLKLLE-VSKKVHAIEIDERMVEILNRR 71 (232)
Q Consensus 24 ~~~~~~~~~~vLDiG~G~-G~~t~~l~~-~~~~v~~vD~~~~~~~~a~~~ 71 (232)
+..+++++++||=+|+|. |.++..+++ .+.+|++++ +++-.+.+++.
T Consensus 136 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~l 184 (315)
T 3goh_A 136 EKIPLTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKR 184 (315)
T ss_dssp TTSCCCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHH
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHc
Confidence 556788999999999953 667777776 678999999 88877877663
No 433
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=86.24 E-value=2.2 Score=35.04 Aligned_cols=47 Identities=17% Similarity=0.245 Sum_probs=37.8
Q ss_pred HhcCCCCCCEEEEEc--CCccHhHHHHHh-cCCeEEEEEcCHHHHHHHHH
Q 047897 24 RKSSINPDDTVLEIG--PGTGNLTLKLLE-VSKKVHAIEIDERMVEILNR 70 (232)
Q Consensus 24 ~~~~~~~~~~vLDiG--~G~G~~t~~l~~-~~~~v~~vD~~~~~~~~a~~ 70 (232)
+..+++++++||-+| .|.|..+..+++ .+.+|++++.+++-.+.+++
T Consensus 157 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~ 206 (362)
T 2c0c_A 157 ELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS 206 (362)
T ss_dssp HHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred HhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH
Confidence 445778999999999 466777777776 67899999999888877765
No 434
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=86.21 E-value=4.8 Score=31.22 Aligned_cols=74 Identities=18% Similarity=0.255 Sum_probs=49.9
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------CC
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------FP 94 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~~ 94 (232)
.+.++|=.|++.| .++..|++.+.+|++++.+++-.+.+.+.+.......++.++.+|+.+.. ++
T Consensus 12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 91 (267)
T 1iy8_A 12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG 91 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4667888887655 24455555789999999998776665555543311146889999998753 12
Q ss_pred Ccceeeccc
Q 047897 95 QFDLVVANI 103 (232)
Q Consensus 95 ~~D~Vi~n~ 103 (232)
..|++|.|.
T Consensus 92 ~id~lv~nA 100 (267)
T 1iy8_A 92 RIDGFFNNA 100 (267)
T ss_dssp CCSEEEECC
T ss_pred CCCEEEECC
Confidence 468888774
No 435
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=85.92 E-value=2.5 Score=33.03 Aligned_cols=70 Identities=16% Similarity=0.164 Sum_probs=48.8
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------CC
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------FP 94 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~~ 94 (232)
.+.++|=.|++.| .++..+++.+.+|+.++.+++.++.+.+.. + .++.++.+|+.+.. ++
T Consensus 26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 100 (266)
T 3grp_A 26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL---G--KDVFVFSANLSDRKSIKQLAEVAEREME 100 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C--SSEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C--CceEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 4667887786655 245555567899999999987666554433 3 46899999998753 12
Q ss_pred CcceeecccC
Q 047897 95 QFDLVVANIP 104 (232)
Q Consensus 95 ~~D~Vi~n~p 104 (232)
..|++|.|.-
T Consensus 101 ~iD~lvnnAg 110 (266)
T 3grp_A 101 GIDILVNNAG 110 (266)
T ss_dssp SCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 5788888753
No 436
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=85.75 E-value=1.7 Score=34.38 Aligned_cols=72 Identities=17% Similarity=0.215 Sum_probs=52.1
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------CC
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------FP 94 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~~ 94 (232)
.+.++|=.|++.| .++..+++.+.+|++++.+++.++.+.+.+...+ .++.++.+|+.+.. ++
T Consensus 7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 84 (280)
T 3tox_A 7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGG--GEAAALAGDVGDEALHEALVELAVRRFG 84 (280)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTT--CCEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4667887887655 2555556688999999999988777766665544 57899999998752 12
Q ss_pred Ccceeeccc
Q 047897 95 QFDLVVANI 103 (232)
Q Consensus 95 ~~D~Vi~n~ 103 (232)
..|++|.|.
T Consensus 85 ~iD~lvnnA 93 (280)
T 3tox_A 85 GLDTAFNNA 93 (280)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 578888774
No 437
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=85.71 E-value=2.1 Score=33.66 Aligned_cols=69 Identities=16% Similarity=0.245 Sum_probs=47.5
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------CC
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------FP 94 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~~ 94 (232)
.+.++|=.|++.| .++..+++.+.+|+.++.+++.++.+.+.+ + .++.++.+|+.+.. ++
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 101 (272)
T 4dyv_A 27 GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI---G--DDALCVPTDVTDPDSVRALFTATVEKFG 101 (272)
T ss_dssp -CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---T--SCCEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---C--CCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4567777776554 244555557899999999987766555544 2 46889999998753 12
Q ss_pred Ccceeeccc
Q 047897 95 QFDLVVANI 103 (232)
Q Consensus 95 ~~D~Vi~n~ 103 (232)
..|++|.|.
T Consensus 102 ~iD~lVnnA 110 (272)
T 4dyv_A 102 RVDVLFNNA 110 (272)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 578888774
No 438
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=85.67 E-value=2.5 Score=33.40 Aligned_cols=69 Identities=20% Similarity=0.184 Sum_probs=47.7
Q ss_pred CCCEEEEEcCCccH---hHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC--------CCCcce
Q 047897 30 PDDTVLEIGPGTGN---LTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE--------FPQFDL 98 (232)
Q Consensus 30 ~~~~vLDiG~G~G~---~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~--------~~~~D~ 98 (232)
.+.++|=.|++.|. ++..|++.+.+|++++.++.-.+.+.+.+ ..++.++.+|+.+.. ....|+
T Consensus 15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~ 89 (291)
T 3rd5_A 15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-----AGQVEVRELDLQDLSSVRRFADGVSGADV 89 (291)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS-----SSEEEEEECCTTCHHHHHHHHHTCCCEEE
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----cCCeeEEEcCCCCHHHHHHHHHhcCCCCE
Confidence 46788888866542 44445557899999999987665544332 257999999998753 125688
Q ss_pred eeccc
Q 047897 99 VVANI 103 (232)
Q Consensus 99 Vi~n~ 103 (232)
+|.|.
T Consensus 90 lv~nA 94 (291)
T 3rd5_A 90 LINNA 94 (291)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 88764
No 439
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=85.67 E-value=4.8 Score=31.12 Aligned_cols=69 Identities=19% Similarity=0.259 Sum_probs=50.0
Q ss_pred CCCEEEEEcCCccH---hHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------CC
Q 047897 30 PDDTVLEIGPGTGN---LTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------FP 94 (232)
Q Consensus 30 ~~~~vLDiG~G~G~---~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~~ 94 (232)
.+.++|=.|++.|. ++..+++.+.+|+.++.+++.++...+.. + .++.++.+|+.+.. ++
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---G--PRVHALRSDIADLNEIAVLGAAAGQTLG 81 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---G--GGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C--CcceEEEccCCCHHHHHHHHHHHHHHhC
Confidence 46788888876652 55555668899999999988776665554 2 57899999998753 12
Q ss_pred Ccceeeccc
Q 047897 95 QFDLVVANI 103 (232)
Q Consensus 95 ~~D~Vi~n~ 103 (232)
..|+++.|-
T Consensus 82 ~id~lv~nA 90 (255)
T 4eso_A 82 AIDLLHINA 90 (255)
T ss_dssp SEEEEEECC
T ss_pred CCCEEEECC
Confidence 578888774
No 440
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=85.66 E-value=3.8 Score=31.95 Aligned_cols=72 Identities=21% Similarity=0.232 Sum_probs=50.7
Q ss_pred CCCEEEEEcCCccH---hHHHHHhcCCeEEEEEc-CHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------C
Q 047897 30 PDDTVLEIGPGTGN---LTLKLLEVSKKVHAIEI-DERMVEILNRRAADSGFHDRLNVISKDALKTE------------F 93 (232)
Q Consensus 30 ~~~~vLDiG~G~G~---~t~~l~~~~~~v~~vD~-~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~ 93 (232)
.+.++|=.|++.|. ++..+++.+.+|+.++. ++...+...+.+...+ .++.++.+|+.+.. .
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~ 105 (271)
T 4iin_A 28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKG--YKAAVIKFDAASESDFIEAIQTIVQSD 105 (271)
T ss_dssp SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHhc
Confidence 46678877876552 45555557899999998 5666666666666554 46999999998752 1
Q ss_pred CCcceeeccc
Q 047897 94 PQFDLVVANI 103 (232)
Q Consensus 94 ~~~D~Vi~n~ 103 (232)
+..|.+|.|.
T Consensus 106 g~id~li~nA 115 (271)
T 4iin_A 106 GGLSYLVNNA 115 (271)
T ss_dssp SSCCEEEECC
T ss_pred CCCCEEEECC
Confidence 2578888774
No 441
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=85.63 E-value=4.9 Score=31.03 Aligned_cols=72 Identities=15% Similarity=0.229 Sum_probs=48.5
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhc-CCCccEEEEEcCCCCCC------------C
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADS-GFHDRLNVISKDALKTE------------F 93 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~-~~~~~~~~~~~D~~~~~------------~ 93 (232)
.+.++|=.|++.| .++..+++.+.+|++++.+++-.+.+.+.+... + .++.++.+|+.+.. +
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (263)
T 3ai3_A 6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFG--VRVLEVAVDVATPEGVDAVVESVRSSF 83 (263)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC--CCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3567887776554 244445557899999999987666555444332 3 46889999998752 1
Q ss_pred CCcceeeccc
Q 047897 94 PQFDLVVANI 103 (232)
Q Consensus 94 ~~~D~Vi~n~ 103 (232)
+..|++|.|.
T Consensus 84 g~id~lv~~A 93 (263)
T 3ai3_A 84 GGADILVNNA 93 (263)
T ss_dssp SSCSEEEECC
T ss_pred CCCCEEEECC
Confidence 2578888775
No 442
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=85.62 E-value=3.9 Score=32.09 Aligned_cols=71 Identities=11% Similarity=0.180 Sum_probs=48.7
Q ss_pred CCCEEEEEcCCccHhHHH----HHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------C
Q 047897 30 PDDTVLEIGPGTGNLTLK----LLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------F 93 (232)
Q Consensus 30 ~~~~vLDiG~G~G~~t~~----l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~ 93 (232)
.+.++|=.|++ |.++.. +++.+.+|++++.+++-++.+.+.+...+. .++.++.+|+.+.. .
T Consensus 27 ~~k~vlITGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 104 (286)
T 1xu9_A 27 QGKKVIVTGAS-KGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA-ASAHYIAGTMEDMTFAEQFVAQAGKLM 104 (286)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC-SEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCC-CceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 35678877765 444444 444789999999998877766655544432 36899999998742 1
Q ss_pred CCcceeecc
Q 047897 94 PQFDLVVAN 102 (232)
Q Consensus 94 ~~~D~Vi~n 102 (232)
+..|++|.|
T Consensus 105 g~iD~li~n 113 (286)
T 1xu9_A 105 GGLDMLILN 113 (286)
T ss_dssp TSCSEEEEC
T ss_pred CCCCEEEEC
Confidence 257888866
No 443
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=85.56 E-value=2 Score=35.16 Aligned_cols=46 Identities=17% Similarity=0.242 Sum_probs=35.7
Q ss_pred hcCCCCCCEEEEEcC--CccHhHHHHHh-cCCeEEEEEcCHHHHHHHHH
Q 047897 25 KSSINPDDTVLEIGP--GTGNLTLKLLE-VSKKVHAIEIDERMVEILNR 70 (232)
Q Consensus 25 ~~~~~~~~~vLDiG~--G~G~~t~~l~~-~~~~v~~vD~~~~~~~~a~~ 70 (232)
..+++++++||-.|+ |.|..+..+++ .+.+|++++.+++-.+.+++
T Consensus 165 ~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 213 (351)
T 1yb5_A 165 SACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ 213 (351)
T ss_dssp TSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred hhCCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH
Confidence 457788999999997 45666666665 68899999999987776654
No 444
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=85.47 E-value=3.9 Score=31.26 Aligned_cols=71 Identities=11% Similarity=0.160 Sum_probs=48.4
Q ss_pred CCCEEEEEcCCccHhHHHHH----hcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------C
Q 047897 30 PDDTVLEIGPGTGNLTLKLL----EVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------F 93 (232)
Q Consensus 30 ~~~~vLDiG~G~G~~t~~l~----~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~ 93 (232)
.+.++|=.|+ +|.++..++ +.+.+|++++.+++..+...+.+...+ .++.++.+|+.+.. +
T Consensus 10 ~~~~vlVtGa-sggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 86 (255)
T 1fmc_A 10 DGKCAIITGA-GAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG--GQAFACRCDITSEQELSALADFAISKL 86 (255)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-ccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhC--CceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 3567776664 455555544 468899999999877666555555444 46889999997642 1
Q ss_pred CCcceeeccc
Q 047897 94 PQFDLVVANI 103 (232)
Q Consensus 94 ~~~D~Vi~n~ 103 (232)
..+|.||.|.
T Consensus 87 ~~~d~vi~~A 96 (255)
T 1fmc_A 87 GKVDILVNNA 96 (255)
T ss_dssp SSCCEEEECC
T ss_pred CCCCEEEECC
Confidence 2578888764
No 445
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=85.42 E-value=1.7 Score=35.14 Aligned_cols=48 Identities=13% Similarity=0.196 Sum_probs=37.3
Q ss_pred HhcCCCCCCEEEEEcC--CccHhHHHHHh-cCCeEEEEEcCHHHHHHHHHH
Q 047897 24 RKSSINPDDTVLEIGP--GTGNLTLKLLE-VSKKVHAIEIDERMVEILNRR 71 (232)
Q Consensus 24 ~~~~~~~~~~vLDiG~--G~G~~t~~l~~-~~~~v~~vD~~~~~~~~a~~~ 71 (232)
+..+++++++||=+|+ |.|..+..+++ .+.+|++++.+++-.+.+++.
T Consensus 134 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ 184 (325)
T 3jyn_A 134 QTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKAL 184 (325)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc
Confidence 3456788999999983 45667766666 688999999999888877653
No 446
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=85.37 E-value=1.8 Score=35.26 Aligned_cols=46 Identities=22% Similarity=0.270 Sum_probs=35.5
Q ss_pred HhcCCCCCCEEEEEcCCc-cHhHHHHHh-cCC-eEEEEEcCHHHHHHHHH
Q 047897 24 RKSSINPDDTVLEIGPGT-GNLTLKLLE-VSK-KVHAIEIDERMVEILNR 70 (232)
Q Consensus 24 ~~~~~~~~~~vLDiG~G~-G~~t~~l~~-~~~-~v~~vD~~~~~~~~a~~ 70 (232)
+..++ ++++||-+|+|. |..+..+++ .+. +|++++.+++-.+.+++
T Consensus 162 ~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~ 210 (348)
T 2d8a_A 162 LAGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKK 210 (348)
T ss_dssp TTSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHH
T ss_pred HhcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 45567 899999999853 556666665 566 99999999988887764
No 447
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=85.30 E-value=5.6 Score=30.05 Aligned_cols=71 Identities=20% Similarity=0.181 Sum_probs=48.8
Q ss_pred CCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHh-hcCCCccEEEEEcCCCCCC------------CC
Q 047897 31 DDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAA-DSGFHDRLNVISKDALKTE------------FP 94 (232)
Q Consensus 31 ~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~~~~~~~~D~~~~~------------~~ 94 (232)
+.++|=.|++.| .++..+++.+.+|+.++.+++-.+.+.+.+. ..+ .++.++.+|+.+.. ++
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQG--VEVFYHHLDVSKAESVEEFSKKVLERFG 79 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC--CCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC--CeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence 456777776554 2444555578999999999887766655553 333 46999999998753 12
Q ss_pred Ccceeeccc
Q 047897 95 QFDLVVANI 103 (232)
Q Consensus 95 ~~D~Vi~n~ 103 (232)
..|++|.|.
T Consensus 80 ~id~li~~A 88 (235)
T 3l77_A 80 DVDVVVANA 88 (235)
T ss_dssp SCSEEEECC
T ss_pred CCCEEEECC
Confidence 578888774
No 448
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=85.23 E-value=1.5 Score=35.81 Aligned_cols=48 Identities=23% Similarity=0.429 Sum_probs=38.5
Q ss_pred HhcCCCCCCEEEEEcC--CccHhHHHHHh-cCCeEEEEEcCHHHHHHHHHH
Q 047897 24 RKSSINPDDTVLEIGP--GTGNLTLKLLE-VSKKVHAIEIDERMVEILNRR 71 (232)
Q Consensus 24 ~~~~~~~~~~vLDiG~--G~G~~t~~l~~-~~~~v~~vD~~~~~~~~a~~~ 71 (232)
+...++++++||=+|+ |.|..+..+++ .+.+|++++.+++-.+.+++.
T Consensus 153 ~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ 203 (342)
T 4eye_A 153 RRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSV 203 (342)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc
Confidence 4567788999999997 55677777776 678999999999888877763
No 449
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=85.23 E-value=0.32 Score=39.12 Aligned_cols=30 Identities=23% Similarity=0.170 Sum_probs=23.6
Q ss_pred ccEEEEEcCCCCC----CCCCcceeecccCcccc
Q 047897 79 DRLNVISKDALKT----EFPQFDLVVANIPYGIS 108 (232)
Q Consensus 79 ~~~~~~~~D~~~~----~~~~~D~Vi~n~p~~~~ 108 (232)
++.+++++|+++. +.+++|+|++||||...
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~ 53 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYWTL 53 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCC
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCCCc
Confidence 4678999999873 33489999999999754
No 450
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=84.79 E-value=4.5 Score=31.68 Aligned_cols=74 Identities=19% Similarity=0.309 Sum_probs=49.5
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCC-CccEEEEEcCCCCCC------------C
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGF-HDRLNVISKDALKTE------------F 93 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~~~D~~~~~------------~ 93 (232)
.+.++|=.|++.| .++..+++.+.+|++++.+++..+.+.+.+...+. ..++.++.+|+.+.. +
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (280)
T 1xkq_A 5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF 84 (280)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence 3567777776544 24444555789999999998877666555544331 126899999998752 1
Q ss_pred CCcceeeccc
Q 047897 94 PQFDLVVANI 103 (232)
Q Consensus 94 ~~~D~Vi~n~ 103 (232)
+..|++|.|.
T Consensus 85 g~iD~lv~nA 94 (280)
T 1xkq_A 85 GKIDVLVNNA 94 (280)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 2578888874
No 451
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=84.75 E-value=2.2 Score=33.40 Aligned_cols=72 Identities=15% Similarity=0.219 Sum_probs=48.4
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHH-------HHHHHHHHhhcCCCccEEEEEcCCCCCC-------
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERM-------VEILNRRAADSGFHDRLNVISKDALKTE------- 92 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~-------~~~a~~~~~~~~~~~~~~~~~~D~~~~~------- 92 (232)
.+.++|=.|++.| .++..+++.+.+|+.++.+.+- ++...+.....+ .++.++.+|+.+..
T Consensus 5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~ 82 (274)
T 3e03_A 5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAG--GQGLALKCDIREEDQVRAAVA 82 (274)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHT--SEEEEEECCTTCHHHHHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcC--CeEEEEeCCCCCHHHHHHHHH
Confidence 4668888888766 3555566688999999988642 333333333333 57999999998753
Q ss_pred -----CCCcceeeccc
Q 047897 93 -----FPQFDLVVANI 103 (232)
Q Consensus 93 -----~~~~D~Vi~n~ 103 (232)
++..|++|.|.
T Consensus 83 ~~~~~~g~iD~lvnnA 98 (274)
T 3e03_A 83 ATVDTFGGIDILVNNA 98 (274)
T ss_dssp HHHHHHSCCCEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 12578888874
No 452
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=84.70 E-value=3.2 Score=33.67 Aligned_cols=49 Identities=20% Similarity=0.407 Sum_probs=36.7
Q ss_pred HHhcCCCCCCEEEEEcCCccH-hHHHHHh--cCCeEEEEEcCHHHHHHHHHH
Q 047897 23 VRKSSINPDDTVLEIGPGTGN-LTLKLLE--VSKKVHAIEIDERMVEILNRR 71 (232)
Q Consensus 23 ~~~~~~~~~~~vLDiG~G~G~-~t~~l~~--~~~~v~~vD~~~~~~~~a~~~ 71 (232)
++...++++++||=+|+|.+. ++..+++ .+.+|+++|.+++-.+.+++.
T Consensus 156 l~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~ 207 (348)
T 4eez_A 156 IKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKI 207 (348)
T ss_dssp HHHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHT
T ss_pred ecccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhc
Confidence 455677899999999998754 4444444 478999999999877766554
No 453
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=84.70 E-value=2.4 Score=32.90 Aligned_cols=72 Identities=14% Similarity=0.113 Sum_probs=49.4
Q ss_pred CCCCEEEEEcCC-ccH----hHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC-----------
Q 047897 29 NPDDTVLEIGPG-TGN----LTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE----------- 92 (232)
Q Consensus 29 ~~~~~vLDiG~G-~G~----~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~----------- 92 (232)
.++.+||=.|++ +|. ++..+++.+.+|+.++.+....+.+++..... +++.++.+|+.+..
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~ 88 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF---GSELVFPCDVADDAQIDALFASLKT 88 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHT---TCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHc---CCcEEEECCCCCHHHHHHHHHHHHH
Confidence 357789988864 233 44555557899999998876666665555443 34788999998753
Q ss_pred -CCCcceeeccc
Q 047897 93 -FPQFDLVVANI 103 (232)
Q Consensus 93 -~~~~D~Vi~n~ 103 (232)
++..|++|.|.
T Consensus 89 ~~g~id~lv~nA 100 (271)
T 3ek2_A 89 HWDSLDGLVHSI 100 (271)
T ss_dssp HCSCEEEEEECC
T ss_pred HcCCCCEEEECC
Confidence 12568888774
No 454
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=84.69 E-value=1.9 Score=36.03 Aligned_cols=45 Identities=27% Similarity=0.367 Sum_probs=35.2
Q ss_pred CCCCCCEEEEEcCCc-cHhHHHHHh-cCC-eEEEEEcCHHHHHHHHHH
Q 047897 27 SINPDDTVLEIGPGT-GNLTLKLLE-VSK-KVHAIEIDERMVEILNRR 71 (232)
Q Consensus 27 ~~~~~~~vLDiG~G~-G~~t~~l~~-~~~-~v~~vD~~~~~~~~a~~~ 71 (232)
++.++++||=+|+|. |.++..+++ .+. +|+++|.+++-.+.+++.
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l 257 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKEL 257 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc
Confidence 577899999999854 556666666 566 999999999888887654
No 455
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=84.68 E-value=5.8 Score=31.01 Aligned_cols=72 Identities=15% Similarity=0.157 Sum_probs=49.9
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcC------------HHHHHHHHHHHhhcCCCccEEEEEcCCCCCC--
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEID------------ERMVEILNRRAADSGFHDRLNVISKDALKTE-- 92 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~------------~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~-- 92 (232)
.+.++|=.|++.| .++..+++.+.+|+.++.+ .+.++...+.....+ .++.++.+|+.+..
T Consensus 9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v 86 (281)
T 3s55_A 9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTG--RRCISAKVDVKDRAAL 86 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcC--CeEEEEeCCCCCHHHH
Confidence 4678888887665 2555556688999999986 455555555554444 57999999998752
Q ss_pred ----------CCCcceeeccc
Q 047897 93 ----------FPQFDLVVANI 103 (232)
Q Consensus 93 ----------~~~~D~Vi~n~ 103 (232)
++..|++|.|-
T Consensus 87 ~~~~~~~~~~~g~id~lv~nA 107 (281)
T 3s55_A 87 ESFVAEAEDTLGGIDIAITNA 107 (281)
T ss_dssp HHHHHHHHHHHTCCCEEEECC
T ss_pred HHHHHHHHHhcCCCCEEEECC
Confidence 12578888774
No 456
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=84.67 E-value=7.5 Score=30.93 Aligned_cols=72 Identities=19% Similarity=0.143 Sum_probs=46.9
Q ss_pred CCCEEEEEcCCccHhHHHHHh----cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEE-EcCCCCCCC-----CCccee
Q 047897 30 PDDTVLEIGPGTGNLTLKLLE----VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVI-SKDALKTEF-----PQFDLV 99 (232)
Q Consensus 30 ~~~~vLDiG~G~G~~t~~l~~----~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~-~~D~~~~~~-----~~~D~V 99 (232)
++.+||=.| |+|.++..+++ .+.+|++++.++.-.+.+.+.+.... ..+++++ .+|+.+... ..+|.|
T Consensus 10 ~~~~vlVTG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~v 87 (342)
T 1y1p_A 10 EGSLVLVTG-ANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY-PGRFETAVVEDMLKQGAYDEVIKGAAGV 87 (342)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHS-TTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred CCCEEEEEC-CccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccC-CCceEEEEecCCcChHHHHHHHcCCCEE
Confidence 466788777 45666665544 68899999998776554444432211 1468888 799876532 257888
Q ss_pred eccc
Q 047897 100 VANI 103 (232)
Q Consensus 100 i~n~ 103 (232)
|.+.
T Consensus 88 ih~A 91 (342)
T 1y1p_A 88 AHIA 91 (342)
T ss_dssp EECC
T ss_pred EEeC
Confidence 8764
No 457
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=84.52 E-value=5 Score=30.95 Aligned_cols=72 Identities=15% Similarity=0.127 Sum_probs=48.3
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------CC
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------FP 94 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~~ 94 (232)
.+.++|=.|++.| .++..|++.+.+|++++.+++-.+...+.+...+ .++.++.+|+.+.. ++
T Consensus 13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g 90 (260)
T 2zat_A 13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEG--LSVTGTVCHVGKAEDRERLVAMAVNLHG 90 (260)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4567777775544 2444445578999999999877665555554444 46888999987642 12
Q ss_pred Ccceeeccc
Q 047897 95 QFDLVVANI 103 (232)
Q Consensus 95 ~~D~Vi~n~ 103 (232)
..|++|.|.
T Consensus 91 ~iD~lv~~A 99 (260)
T 2zat_A 91 GVDILVSNA 99 (260)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 578888774
No 458
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=84.49 E-value=4 Score=31.95 Aligned_cols=68 Identities=13% Similarity=0.195 Sum_probs=48.0
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC-----------CCC
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE-----------FPQ 95 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~-----------~~~ 95 (232)
.+.++|=.|++.| .++..+++.+.+|+.++.+++-++.+.+.+ + .++.++.+|+.+.. +..
T Consensus 29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~~ 103 (281)
T 3ppi_A 29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL---G--NRAEFVSTNVTSEDSVLAAIEAANQLGR 103 (281)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C--TTEEEEECCTTCHHHHHHHHHHHTTSSE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---C--CceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 4567888887665 255555568899999999988776655554 2 56999999998752 124
Q ss_pred cceeecc
Q 047897 96 FDLVVAN 102 (232)
Q Consensus 96 ~D~Vi~n 102 (232)
.|.++.|
T Consensus 104 id~lv~~ 110 (281)
T 3ppi_A 104 LRYAVVA 110 (281)
T ss_dssp EEEEEEC
T ss_pred CCeEEEc
Confidence 6777765
No 459
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=84.45 E-value=4.8 Score=31.52 Aligned_cols=69 Identities=14% Similarity=0.193 Sum_probs=47.6
Q ss_pred CEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------CCCc
Q 047897 32 DTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------FPQF 96 (232)
Q Consensus 32 ~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~~~~ 96 (232)
.++|=.|++.| .++..|++.+.+|++++.+++.++.+.+.+... .++.++.+|+.+.. ++..
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 98 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK---TRVLPLTLDVRDRAAMSAAVDNLPEEFATL 98 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT---SCEEEEECCTTCHHHHHHHHHTCCGGGSSC
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC---CcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 56787776554 255555668899999999987776655554322 36889999997642 1246
Q ss_pred ceeeccc
Q 047897 97 DLVVANI 103 (232)
Q Consensus 97 D~Vi~n~ 103 (232)
|++|.|.
T Consensus 99 D~lvnnA 105 (272)
T 2nwq_A 99 RGLINNA 105 (272)
T ss_dssp CEEEECC
T ss_pred CEEEECC
Confidence 8888875
No 460
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=84.32 E-value=5.2 Score=30.33 Aligned_cols=67 Identities=19% Similarity=0.195 Sum_probs=43.5
Q ss_pred CCCEEEEEcCCccHhHHH----HHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC--------CCCcc
Q 047897 30 PDDTVLEIGPGTGNLTLK----LLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE--------FPQFD 97 (232)
Q Consensus 30 ~~~~vLDiG~G~G~~t~~----l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~--------~~~~D 97 (232)
.+.++|=.|++ |.++.. +++.+.+|++++.++.-.+...+.. .+++++.+|+.+.. .+..|
T Consensus 6 ~~~~vlVTGas-ggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~id 78 (244)
T 1cyd_A 6 SGLRALVTGAG-KGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC------PGIEPVCVDLGDWDATEKALGGIGPVD 78 (244)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHHTTCCCCS
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc------cCCCcEEecCCCHHHHHHHHHHcCCCC
Confidence 45678877754 444444 4447899999999986655433321 24667789987642 23578
Q ss_pred eeeccc
Q 047897 98 LVVANI 103 (232)
Q Consensus 98 ~Vi~n~ 103 (232)
.|+.|.
T Consensus 79 ~vi~~A 84 (244)
T 1cyd_A 79 LLVNNA 84 (244)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 888774
No 461
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=84.16 E-value=2 Score=34.74 Aligned_cols=45 Identities=20% Similarity=0.290 Sum_probs=35.7
Q ss_pred cCCCCCCEEEEEcC--CccHhHHHHHh-cCCeEEEEEcCHHHHHHHHH
Q 047897 26 SSINPDDTVLEIGP--GTGNLTLKLLE-VSKKVHAIEIDERMVEILNR 70 (232)
Q Consensus 26 ~~~~~~~~vLDiG~--G~G~~t~~l~~-~~~~v~~vD~~~~~~~~a~~ 70 (232)
..++++++||=+|+ |.|..+..+++ .+.+|++++.+++-.+.+++
T Consensus 144 ~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 191 (334)
T 3qwb_A 144 YHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKE 191 (334)
T ss_dssp SCCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 46788999999994 45666666666 68899999999988877765
No 462
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=84.07 E-value=3 Score=33.15 Aligned_cols=73 Identities=18% Similarity=0.217 Sum_probs=51.6
Q ss_pred CCCEEEEEcCCccH---hHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------CC
Q 047897 30 PDDTVLEIGPGTGN---LTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------FP 94 (232)
Q Consensus 30 ~~~~vLDiG~G~G~---~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~~ 94 (232)
.+.++|=.|++.|. ++..|++.+.+|+.++.+++-.+.+.+.+...+. .++.++.+|+.+.. ++
T Consensus 40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 118 (293)
T 3rih_A 40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGA-GNVIGVRLDVSDPGSCADAARTVVDAFG 118 (293)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSS-SCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCC-CcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 45678877765552 4555555789999999998877776666655442 47899999998752 12
Q ss_pred Ccceeeccc
Q 047897 95 QFDLVVANI 103 (232)
Q Consensus 95 ~~D~Vi~n~ 103 (232)
..|++|.|-
T Consensus 119 ~iD~lvnnA 127 (293)
T 3rih_A 119 ALDVVCANA 127 (293)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 568888774
No 463
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=84.05 E-value=1.6 Score=37.48 Aligned_cols=83 Identities=23% Similarity=0.259 Sum_probs=55.4
Q ss_pred CCHHHHHHHHHhcCC--CCCCEEEEEcCCccH-hHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCC
Q 047897 14 TNQRVLDSIVRKSSI--NPDDTVLEIGPGTGN-LTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALK 90 (232)
Q Consensus 14 ~~~~~~~~i~~~~~~--~~~~~vLDiG~G~G~-~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~ 90 (232)
..++-++.+.+.+.. .+-.+|+=+|.|.-+ .....++....|..+|.|++.++.+.+.+ ++..+++||+.+
T Consensus 216 ~~~~~i~~~~~~~g~~~~~~~~v~I~GgG~ig~~lA~~L~~~~~v~iIE~d~~r~~~la~~l------~~~~Vi~GD~td 289 (461)
T 4g65_A 216 AASNHIRSVMSELQRLEKPYRRIMIVGGGNIGASLAKRLEQTYSVKLIERNLQRAEKLSEEL------ENTIVFCGDAAD 289 (461)
T ss_dssp EETTTHHHHHHHTTGGGSCCCEEEEECCSHHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHC------TTSEEEESCTTC
T ss_pred eccchHHHHHHhhccccccccEEEEEcchHHHHHHHHHhhhcCceEEEecCHHHHHHHHHHC------CCceEEeccccc
Confidence 344555666666543 234578877776533 22223335689999999999988887776 468899999988
Q ss_pred CC------CCCcceeecc
Q 047897 91 TE------FPQFDLVVAN 102 (232)
Q Consensus 91 ~~------~~~~D~Vi~n 102 (232)
.. .+..|.+++-
T Consensus 290 ~~~L~ee~i~~~D~~ia~ 307 (461)
T 4g65_A 290 QELLTEENIDQVDVFIAL 307 (461)
T ss_dssp HHHHHHTTGGGCSEEEEC
T ss_pred hhhHhhcCchhhcEEEEc
Confidence 53 2367877763
No 464
>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*
Probab=83.97 E-value=5.7 Score=33.55 Aligned_cols=74 Identities=19% Similarity=0.253 Sum_probs=47.5
Q ss_pred CCCCCEEEEEcCCccH-h----HHHHHhcCCeEEEEEcCHHH------------HHHHHHHHhhcCCCccEEEEEcCCCC
Q 047897 28 INPDDTVLEIGPGTGN-L----TLKLLEVSKKVHAIEIDERM------------VEILNRRAADSGFHDRLNVISKDALK 90 (232)
Q Consensus 28 ~~~~~~vLDiG~G~G~-~----t~~l~~~~~~v~~vD~~~~~------------~~~a~~~~~~~~~~~~~~~~~~D~~~ 90 (232)
...+.++|=.|+++|. . +..+++.+.+|++++.+... .+.+.+.....| .++..+.+|+.+
T Consensus 57 ~~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~Dvtd 134 (418)
T 4eue_A 57 FRGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKG--LVAKNFIEDAFS 134 (418)
T ss_dssp CCCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTT--CCEEEEESCTTC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcC--CcEEEEEeeCCC
Confidence 4567889999988774 2 22233358999999876422 233344444444 458899999987
Q ss_pred CC------------CCCcceeeccc
Q 047897 91 TE------------FPQFDLVVANI 103 (232)
Q Consensus 91 ~~------------~~~~D~Vi~n~ 103 (232)
.. +...|++|.|.
T Consensus 135 ~~~v~~~v~~i~~~~G~IDiLVnNA 159 (418)
T 4eue_A 135 NETKDKVIKYIKDEFGKIDLFVYSL 159 (418)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECC
Confidence 52 23678888774
No 465
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=83.95 E-value=2.8 Score=33.87 Aligned_cols=73 Identities=22% Similarity=0.172 Sum_probs=40.5
Q ss_pred CCEEEEEcCCccHhHHHHHh------cCC--eEEEEEcCH---------HHHHHHHHHHhhcC-C-Cc--cEEEEEcCCC
Q 047897 31 DDTVLEIGPGTGNLTLKLLE------VSK--KVHAIEIDE---------RMVEILNRRAADSG-F-HD--RLNVISKDAL 89 (232)
Q Consensus 31 ~~~vLDiG~G~G~~t~~l~~------~~~--~v~~vD~~~---------~~~~~a~~~~~~~~-~-~~--~~~~~~~D~~ 89 (232)
.-+|||+|-|+|......+. ... +++++|.++ ...+..+....... . .+ .+++..||+.
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~ 176 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDAR 176 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHH
Confidence 34799999999986544332 223 467777642 11222222222110 0 12 3567889986
Q ss_pred CC----CCCCcceeeccc
Q 047897 90 KT----EFPQFDLVVANI 103 (232)
Q Consensus 90 ~~----~~~~~D~Vi~n~ 103 (232)
+. +...+|+++.+.
T Consensus 177 ~~l~~l~~~~~Da~flDg 194 (308)
T 3vyw_A 177 KRIKEVENFKADAVFHDA 194 (308)
T ss_dssp HHGGGCCSCCEEEEEECC
T ss_pred HHHhhhcccceeEEEeCC
Confidence 53 223689999873
No 466
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=83.87 E-value=5.5 Score=30.20 Aligned_cols=68 Identities=24% Similarity=0.262 Sum_probs=43.6
Q ss_pred CCCEEEEEcCCccH---hHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC--------CCCcce
Q 047897 30 PDDTVLEIGPGTGN---LTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE--------FPQFDL 98 (232)
Q Consensus 30 ~~~~vLDiG~G~G~---~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~--------~~~~D~ 98 (232)
++.++|=.|++.|. ++..+++.+.+|++++.+++-.+...+.. .+.+++.+|+.+.. .+..|.
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~id~ 79 (244)
T 3d3w_A 6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC------PGIEPVCVDLGDWEATERALGSVGPVDL 79 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHHTTCCCCCE
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc------CCCCEEEEeCCCHHHHHHHHHHcCCCCE
Confidence 45678877765442 44444557899999999986655443322 23567789987642 235788
Q ss_pred eeccc
Q 047897 99 VVANI 103 (232)
Q Consensus 99 Vi~n~ 103 (232)
||.|.
T Consensus 80 vi~~A 84 (244)
T 3d3w_A 80 LVNNA 84 (244)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 88764
No 467
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=83.80 E-value=2.2 Score=33.45 Aligned_cols=71 Identities=18% Similarity=0.222 Sum_probs=50.2
Q ss_pred CCCEEEEEcCCccH---hHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------CC
Q 047897 30 PDDTVLEIGPGTGN---LTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------FP 94 (232)
Q Consensus 30 ~~~~vLDiG~G~G~---~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~~ 94 (232)
+|+++|=-|++.|. ++..+++.+.+|+.++.+.+-.+.+.+.. ..+ .++.++.+|+.+.. +.
T Consensus 6 ~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~-~~~--~~~~~~~~Dv~~~~~v~~~v~~~~~~~G 82 (258)
T 4gkb_A 6 QDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALA-QRQ--PRATYLPVELQDDAQCRDAVAQTIATFG 82 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHH-HHC--TTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHH-hcC--CCEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence 57788888988774 56667778999999998876555444433 333 46889999998752 23
Q ss_pred Ccceeeccc
Q 047897 95 QFDLVVANI 103 (232)
Q Consensus 95 ~~D~Vi~n~ 103 (232)
..|+++.|-
T Consensus 83 ~iDiLVNnA 91 (258)
T 4gkb_A 83 RLDGLVNNA 91 (258)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 578888773
No 468
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=83.65 E-value=5.7 Score=31.36 Aligned_cols=72 Identities=14% Similarity=0.260 Sum_probs=49.5
Q ss_pred CCCEEEEEcCCccH---hHHHHHhcCCeEEEEEcCHH-HHHHHHHHHhhcCCCccEEEEEcCCCCCC------------C
Q 047897 30 PDDTVLEIGPGTGN---LTLKLLEVSKKVHAIEIDER-MVEILNRRAADSGFHDRLNVISKDALKTE------------F 93 (232)
Q Consensus 30 ~~~~vLDiG~G~G~---~t~~l~~~~~~v~~vD~~~~-~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~ 93 (232)
.+.++|=.|++.|. ++..+++.+.+|+.++.+.. ..+.+.+.....+ .++.++.+|+.+.. +
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG--VKCVLLPGDLSDEQHCKDIVQETVRQL 123 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT--CCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 46788888876652 55555668899999998865 4444555555444 57999999998753 1
Q ss_pred CCcceeeccc
Q 047897 94 PQFDLVVANI 103 (232)
Q Consensus 94 ~~~D~Vi~n~ 103 (232)
+..|++|.|.
T Consensus 124 g~iD~lvnnA 133 (291)
T 3ijr_A 124 GSLNILVNNV 133 (291)
T ss_dssp SSCCEEEECC
T ss_pred CCCCEEEECC
Confidence 2578888773
No 469
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=83.47 E-value=6.7 Score=30.33 Aligned_cols=75 Identities=17% Similarity=0.165 Sum_probs=48.9
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------CC
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------FP 94 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~~ 94 (232)
.+.++|=.|++.| .++..+++.+.+|++++.+++..+.+.+.+.......++.++.+|+.+.. ++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (267)
T 2gdz_A 6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG 85 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence 4567888886544 24444555789999999998766555444432211146889999998752 12
Q ss_pred CcceeecccC
Q 047897 95 QFDLVVANIP 104 (232)
Q Consensus 95 ~~D~Vi~n~p 104 (232)
..|++|.|.-
T Consensus 86 ~id~lv~~Ag 95 (267)
T 2gdz_A 86 RLDILVNNAG 95 (267)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 4688888753
No 470
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=83.44 E-value=5.5 Score=31.07 Aligned_cols=72 Identities=19% Similarity=0.266 Sum_probs=50.0
Q ss_pred CCCEEEEEcCCccH---hHHHHHhcCCeEEEEEc-CHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------C
Q 047897 30 PDDTVLEIGPGTGN---LTLKLLEVSKKVHAIEI-DERMVEILNRRAADSGFHDRLNVISKDALKTE------------F 93 (232)
Q Consensus 30 ~~~~vLDiG~G~G~---~t~~l~~~~~~v~~vD~-~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~ 93 (232)
.+.++|=.|++.|. ++..+++.+.+|+.++. +++..+...+.+...+ .++.++.+|+.+.. +
T Consensus 27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~d~~~v~~~~~~~~~~~ 104 (269)
T 4dmm_A 27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAG--GEAFAVKADVSQESEVEALFAAVIERW 104 (269)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 46678877766542 45555558899999988 6666666666665544 46899999998753 1
Q ss_pred CCcceeeccc
Q 047897 94 PQFDLVVANI 103 (232)
Q Consensus 94 ~~~D~Vi~n~ 103 (232)
+..|++|.|.
T Consensus 105 g~id~lv~nA 114 (269)
T 4dmm_A 105 GRLDVLVNNA 114 (269)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 2578888874
No 471
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=83.44 E-value=4 Score=31.37 Aligned_cols=69 Identities=16% Similarity=0.249 Sum_probs=45.2
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCH-HHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------C
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDE-RMVEILNRRAADSGFHDRLNVISKDALKTE------------F 93 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~-~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~ 93 (232)
.+.++|=.|++.| .++..+++.+.+|++++.++ +-.+. .+...+ .++.++.+|+.+.. +
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (249)
T 2ew8_A 6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNLG--RRVLTVKCDVSQPGDVEAFGKQVISTF 80 (249)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhcC--CcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 4567888886554 24444555789999999887 54432 222223 46889999997752 1
Q ss_pred CCcceeeccc
Q 047897 94 PQFDLVVANI 103 (232)
Q Consensus 94 ~~~D~Vi~n~ 103 (232)
+..|++|.|.
T Consensus 81 g~id~lv~nA 90 (249)
T 2ew8_A 81 GRCDILVNNA 90 (249)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 3578888774
No 472
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=83.39 E-value=6.9 Score=30.41 Aligned_cols=73 Identities=18% Similarity=0.146 Sum_probs=48.8
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHH-hhcCCCccEEEEEcCCCCCC------------C
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRA-ADSGFHDRLNVISKDALKTE------------F 93 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~~~~~~~D~~~~~------------~ 93 (232)
.+.++|=.|++.| .++..|++.+.+|++++.+++-++.+.+.+ ...+ .++.++.+|+.+.. +
T Consensus 20 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 97 (267)
T 1vl8_A 20 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG--VETMAFRCDVSNYEEVKKLLEAVKEKF 97 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4567888886554 244445557899999999987666554444 3333 46888999997742 1
Q ss_pred CCcceeecccC
Q 047897 94 PQFDLVVANIP 104 (232)
Q Consensus 94 ~~~D~Vi~n~p 104 (232)
+..|++|.|.-
T Consensus 98 g~iD~lvnnAg 108 (267)
T 1vl8_A 98 GKLDTVVNAAG 108 (267)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 25788887743
No 473
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=83.38 E-value=5.7 Score=30.35 Aligned_cols=71 Identities=20% Similarity=0.281 Sum_probs=47.0
Q ss_pred CCEEEEEcCCcc---HhHHHHHhcCCeEEEEEc-CHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------CC
Q 047897 31 DDTVLEIGPGTG---NLTLKLLEVSKKVHAIEI-DERMVEILNRRAADSGFHDRLNVISKDALKTE------------FP 94 (232)
Q Consensus 31 ~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~-~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~~ 94 (232)
+.++|=.|++.| .++..+++.+.+|++++. +++..+.+.+.+...+ .++.++.+|+.+.. ++
T Consensus 4 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (246)
T 2uvd_A 4 GKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLG--SDAIAVRADVANAEDVTNMVKQTVDVFG 81 (246)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 556776665543 234444457899999998 7776665555554443 46889999998752 12
Q ss_pred Ccceeeccc
Q 047897 95 QFDLVVANI 103 (232)
Q Consensus 95 ~~D~Vi~n~ 103 (232)
..|++|.|.
T Consensus 82 ~id~lv~nA 90 (246)
T 2uvd_A 82 QVDILVNNA 90 (246)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 578888774
No 474
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=83.28 E-value=3.2 Score=33.48 Aligned_cols=46 Identities=20% Similarity=0.293 Sum_probs=36.5
Q ss_pred hcCCCCCCEEEEEcC--CccHhHHHHHh-cCCeEEEEEcCHHHHHHHHH
Q 047897 25 KSSINPDDTVLEIGP--GTGNLTLKLLE-VSKKVHAIEIDERMVEILNR 70 (232)
Q Consensus 25 ~~~~~~~~~vLDiG~--G~G~~t~~l~~-~~~~v~~vD~~~~~~~~a~~ 70 (232)
..+++++++||-.|+ |.|..+..++. .+.+|++++.+++..+.+++
T Consensus 140 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~ 188 (333)
T 1wly_A 140 THKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK 188 (333)
T ss_dssp TSCCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred hhCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 456788999999995 66776666665 67899999999988777765
No 475
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=83.19 E-value=7.2 Score=29.65 Aligned_cols=69 Identities=19% Similarity=0.152 Sum_probs=48.9
Q ss_pred CCEEEEEcCCccH---hHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------CCC
Q 047897 31 DDTVLEIGPGTGN---LTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------FPQ 95 (232)
Q Consensus 31 ~~~vLDiG~G~G~---~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~~~ 95 (232)
+.++|=.|++.|. ++..+++.+.+|++++.+++.++...+... .++.++.+|+.+.. ++.
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 77 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG-----NAVIGIVADLAHHEDVDVAFAAAVEWGGL 77 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-----GGEEEEECCTTSHHHHHHHHHHHHHHHCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-----CCceEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 4567878876552 455556688999999999887776665552 35889999998752 125
Q ss_pred cceeecccC
Q 047897 96 FDLVVANIP 104 (232)
Q Consensus 96 ~D~Vi~n~p 104 (232)
.|++|.|.-
T Consensus 78 id~lvnnAg 86 (235)
T 3l6e_A 78 PELVLHCAG 86 (235)
T ss_dssp CSEEEEECC
T ss_pred CcEEEECCC
Confidence 688887743
No 476
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=83.13 E-value=6 Score=30.37 Aligned_cols=66 Identities=23% Similarity=0.326 Sum_probs=43.1
Q ss_pred EEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------CCCcc
Q 047897 33 TVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------FPQFD 97 (232)
Q Consensus 33 ~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~~~~D 97 (232)
++|=.|++.| .++..+++.+.+|++++.+++.++.+.+.+. .++.++.+|+.+.. ++..|
T Consensus 2 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 76 (248)
T 3asu_A 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG-----DNLYIAQLDVRNRAAIEEMLASLPAEWCNID 76 (248)
T ss_dssp EEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-----TTEEEEECCTTCHHHHHHHHHTSCTTTCCCC
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-----CceEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence 3454554433 2445555578999999999876665544432 36889999987642 23578
Q ss_pred eeeccc
Q 047897 98 LVVANI 103 (232)
Q Consensus 98 ~Vi~n~ 103 (232)
++|.|.
T Consensus 77 ~lvnnA 82 (248)
T 3asu_A 77 ILVNNA 82 (248)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 888764
No 477
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=83.13 E-value=4.6 Score=31.26 Aligned_cols=72 Identities=13% Similarity=0.114 Sum_probs=50.2
Q ss_pred CCCEEEEEcCCccH---hHHHHHhcCCeEEEE-EcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------C
Q 047897 30 PDDTVLEIGPGTGN---LTLKLLEVSKKVHAI-EIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------F 93 (232)
Q Consensus 30 ~~~~vLDiG~G~G~---~t~~l~~~~~~v~~v-D~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~ 93 (232)
.+.++|=.|++.|. ++..+++.+.+|+.+ +.+++..+.+.+.+...+ .++.++.+|+.+.. +
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLG--RSALAIKADLTNAAEVEAAISAAADKF 84 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTT--SCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 46788888876652 555566688999988 666666666666665544 56889999998753 1
Q ss_pred CCcceeeccc
Q 047897 94 PQFDLVVANI 103 (232)
Q Consensus 94 ~~~D~Vi~n~ 103 (232)
+..|+++.|-
T Consensus 85 g~id~lv~nA 94 (259)
T 3edm_A 85 GEIHGLVHVA 94 (259)
T ss_dssp CSEEEEEECC
T ss_pred CCCCEEEECC
Confidence 2578888764
No 478
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=83.11 E-value=2.1 Score=35.00 Aligned_cols=48 Identities=21% Similarity=0.284 Sum_probs=37.2
Q ss_pred HhcCCCCCCEEEEEc--CCccHhHHHHHh-cCCeEEEEEcCHHHHHHHHHH
Q 047897 24 RKSSINPDDTVLEIG--PGTGNLTLKLLE-VSKKVHAIEIDERMVEILNRR 71 (232)
Q Consensus 24 ~~~~~~~~~~vLDiG--~G~G~~t~~l~~-~~~~v~~vD~~~~~~~~a~~~ 71 (232)
+...++++++||=+| .|.|..+..+++ .+.+|++++.+++-.+.+++.
T Consensus 161 ~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l 211 (353)
T 4dup_A 161 QMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERL 211 (353)
T ss_dssp TTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH
T ss_pred HhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc
Confidence 456778899999985 345666666666 688999999999988887763
No 479
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=83.10 E-value=1.6 Score=34.78 Aligned_cols=43 Identities=14% Similarity=0.197 Sum_probs=34.6
Q ss_pred CCCCCEEEEEcC--CccHhHHHHHh-cCCeEEEEEcCHHHHHHHHH
Q 047897 28 INPDDTVLEIGP--GTGNLTLKLLE-VSKKVHAIEIDERMVEILNR 70 (232)
Q Consensus 28 ~~~~~~vLDiG~--G~G~~t~~l~~-~~~~v~~vD~~~~~~~~a~~ 70 (232)
++++++||-+|+ |.|..+..+++ .+.+|++++.+++-.+.+++
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 168 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA 168 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence 788999999997 45667777766 67899999999887777654
No 480
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=83.08 E-value=2.2 Score=34.42 Aligned_cols=46 Identities=15% Similarity=0.195 Sum_probs=35.6
Q ss_pred hcCCCCCCEEEEEcC--CccHhHHHHHh-cCCeEEEEEcCHHHHHHHHH
Q 047897 25 KSSINPDDTVLEIGP--GTGNLTLKLLE-VSKKVHAIEIDERMVEILNR 70 (232)
Q Consensus 25 ~~~~~~~~~vLDiG~--G~G~~t~~l~~-~~~~v~~vD~~~~~~~~a~~ 70 (232)
..+++++++||-.|+ |.|..+..++. .+.+|++++.+++..+.+++
T Consensus 135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~ 183 (327)
T 1qor_A 135 TYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK 183 (327)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH
T ss_pred hhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 456788999999993 55666655555 67899999999988877765
No 481
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=82.86 E-value=5.5 Score=30.63 Aligned_cols=71 Identities=18% Similarity=0.103 Sum_probs=48.2
Q ss_pred CCCEEEEEcCCccHhHHH----HHh-cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCC-----------
Q 047897 30 PDDTVLEIGPGTGNLTLK----LLE-VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEF----------- 93 (232)
Q Consensus 30 ~~~~vLDiG~G~G~~t~~----l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~----------- 93 (232)
.+.++|=.| |+|.++.. |++ .+.+|++++.++.-.+.+.+.+...+ .++.++.+|+.+...
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 79 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG--LSPRFHQLDIDDLQSIRALRDFLRKE 79 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC--CeeEEEECCCCCHHHHHHHHHHHHHh
Confidence 456777666 44555444 455 68899999999877766666665444 468899999987421
Q ss_pred -CCcceeeccc
Q 047897 94 -PQFDLVVANI 103 (232)
Q Consensus 94 -~~~D~Vi~n~ 103 (232)
+.+|+||.|.
T Consensus 80 ~g~id~li~~A 90 (276)
T 1wma_A 80 YGGLDVLVNNA 90 (276)
T ss_dssp HSSEEEEEECC
T ss_pred cCCCCEEEECC
Confidence 2578888764
No 482
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=82.54 E-value=0.95 Score=31.29 Aligned_cols=65 Identities=18% Similarity=0.330 Sum_probs=41.6
Q ss_pred CCEEEEEcCCccHhHHHHHh----cCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------CCCcceee
Q 047897 31 DDTVLEIGPGTGNLTLKLLE----VSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------FPQFDLVV 100 (232)
Q Consensus 31 ~~~vLDiG~G~G~~t~~l~~----~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------~~~~D~Vi 100 (232)
+.+|+=+|+ |.++..+++ .+.+|+++|.+++..+.++ .. ...++.+|..+.. ....|.|+
T Consensus 6 ~~~v~I~G~--G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~----~~----~~~~~~~d~~~~~~l~~~~~~~~d~vi 75 (144)
T 2hmt_A 6 NKQFAVIGL--GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SY----ATHAVIANATEENELLSLGIRNFEYVI 75 (144)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT----TT----CSEEEECCTTCHHHHHTTTGGGCSEEE
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----Hh----CCEEEEeCCCCHHHHHhcCCCCCCEEE
Confidence 456888886 555555544 5788999999986554332 11 2356778775421 23678888
Q ss_pred cccCc
Q 047897 101 ANIPY 105 (232)
Q Consensus 101 ~n~p~ 105 (232)
...+.
T Consensus 76 ~~~~~ 80 (144)
T 2hmt_A 76 VAIGA 80 (144)
T ss_dssp ECCCS
T ss_pred ECCCC
Confidence 77664
No 483
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=82.53 E-value=7.3 Score=29.60 Aligned_cols=70 Identities=17% Similarity=0.243 Sum_probs=46.5
Q ss_pred CCEEEEEcCCccHhHHH----HHhcCCeEEEEEcCHHHHHHHHHHH-hhcCCCccEEEEEcCCCCCCC------------
Q 047897 31 DDTVLEIGPGTGNLTLK----LLEVSKKVHAIEIDERMVEILNRRA-ADSGFHDRLNVISKDALKTEF------------ 93 (232)
Q Consensus 31 ~~~vLDiG~G~G~~t~~----l~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~~~~~~~D~~~~~~------------ 93 (232)
+.++|=.|++ |.++.. +++.+.+|++++.++.-.+...+.+ ...+ .++.++.+|+.+...
T Consensus 2 ~k~vlItGas-ggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (250)
T 2cfc_A 2 SRVAIVTGAS-SGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYA--DKVLRVRADVADEGDVNAAIAATMEQF 78 (250)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTG--GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 3467777754 444444 4447899999999987666555444 2222 578999999987521
Q ss_pred CCcceeeccc
Q 047897 94 PQFDLVVANI 103 (232)
Q Consensus 94 ~~~D~Vi~n~ 103 (232)
+..|.||.|.
T Consensus 79 ~~id~li~~A 88 (250)
T 2cfc_A 79 GAIDVLVNNA 88 (250)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 2578888774
No 484
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=82.50 E-value=2.4 Score=34.72 Aligned_cols=47 Identities=13% Similarity=0.197 Sum_probs=35.8
Q ss_pred HhcCCCCCCEEEEEcC--CccHhHHHHHh-cCCeEEEEEcCHHHHHHHHH
Q 047897 24 RKSSINPDDTVLEIGP--GTGNLTLKLLE-VSKKVHAIEIDERMVEILNR 70 (232)
Q Consensus 24 ~~~~~~~~~~vLDiG~--G~G~~t~~l~~-~~~~v~~vD~~~~~~~~a~~ 70 (232)
+..++.++++||-.|+ |.|..+..++. .+.+|++++.+++-.+.+++
T Consensus 156 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 205 (354)
T 2j8z_A 156 LVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEK 205 (354)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 3456788999999984 45666666655 67899999999988887744
No 485
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=82.49 E-value=2.4 Score=30.06 Aligned_cols=68 Identities=18% Similarity=0.144 Sum_probs=41.8
Q ss_pred CCCCEEEEEcCCccHhHHHHH----hcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCC------CCCCcce
Q 047897 29 NPDDTVLEIGPGTGNLTLKLL----EVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKT------EFPQFDL 98 (232)
Q Consensus 29 ~~~~~vLDiG~G~G~~t~~l~----~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~------~~~~~D~ 98 (232)
.++.+|+=+|+|. ++..++ ..+.+|+++|.+++.++.+++ . ....++.+|..+. ....+|+
T Consensus 17 ~~~~~v~IiG~G~--iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~----~g~~~~~~d~~~~~~l~~~~~~~ad~ 87 (155)
T 2g1u_A 17 QKSKYIVIFGCGR--LGSLIANLASSSGHSVVVVDKNEYAFHRLNS---E----FSGFTVVGDAAEFETLKECGMEKADM 87 (155)
T ss_dssp CCCCEEEEECCSH--HHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---T----CCSEEEESCTTSHHHHHTTTGGGCSE
T ss_pred cCCCcEEEECCCH--HHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---c----CCCcEEEecCCCHHHHHHcCcccCCE
Confidence 3567899998754 433333 367899999999875543321 1 1245677776542 1235788
Q ss_pred eecccCc
Q 047897 99 VVANIPY 105 (232)
Q Consensus 99 Vi~n~p~ 105 (232)
|+...|.
T Consensus 88 Vi~~~~~ 94 (155)
T 2g1u_A 88 VFAFTND 94 (155)
T ss_dssp EEECSSC
T ss_pred EEEEeCC
Confidence 8876553
No 486
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=82.41 E-value=5.6 Score=30.76 Aligned_cols=72 Identities=15% Similarity=0.215 Sum_probs=49.7
Q ss_pred CCCEEEEEcCCccH---hHHHHHhcCCeEEEE-EcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------C
Q 047897 30 PDDTVLEIGPGTGN---LTLKLLEVSKKVHAI-EIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------F 93 (232)
Q Consensus 30 ~~~~vLDiG~G~G~---~t~~l~~~~~~v~~v-D~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~ 93 (232)
.+.++|=.|++.|. ++..|++.+.+|+.+ +.+++..+...+.+...+ .++.++.+|+.+.. +
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLG--VKVLVVKANVGQPAKIKEMFQQIDETF 80 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45677777765542 444555578999886 788877776666665544 56999999998753 1
Q ss_pred CCcceeeccc
Q 047897 94 PQFDLVVANI 103 (232)
Q Consensus 94 ~~~D~Vi~n~ 103 (232)
+..|++|.|-
T Consensus 81 g~id~lv~nA 90 (258)
T 3oid_A 81 GRLDVFVNNA 90 (258)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 2568888775
No 487
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=82.40 E-value=4.1 Score=33.77 Aligned_cols=85 Identities=15% Similarity=0.087 Sum_probs=55.8
Q ss_pred CCCEEEEEcCCccHhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCc-cEEEEEcCCCCCCCCCcceeecccCcccc
Q 047897 30 PDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHD-RLNVISKDALKTEFPQFDLVVANIPYGIS 108 (232)
Q Consensus 30 ~~~~vLDiG~G~G~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-~~~~~~~D~~~~~~~~~D~Vi~n~p~~~~ 108 (232)
.+.+||.++.+-|.++..++.. .++.+.=|--....++.|+..+++++ ++.+... .+.....+|+|+..+|-+..
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~--~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~lpk~~~ 113 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH--KPYSIGDSYISELATRENLRLNGIDESSVKFLDS--TADYPQQPGVVLIKVPKTLA 113 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG--CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEET--TSCCCSSCSEEEEECCSCHH
T ss_pred CCCCEEEECCCCCHHHHhhccC--CceEEEhHHHHHHHHHHHHHHcCCCccceEeccc--ccccccCCCEEEEEcCCCHH
Confidence 4568999999999999998753 45556434444556778888888753 3555433 33333478999998886554
Q ss_pred --hHHHHHHhcC
Q 047897 109 --SPLVAKLVYG 118 (232)
Q Consensus 109 --~~~l~~~~~~ 118 (232)
...+..+...
T Consensus 114 ~l~~~L~~l~~~ 125 (375)
T 4dcm_A 114 LLEQQLRALRKV 125 (375)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHhh
Confidence 2234444443
No 488
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=82.29 E-value=5.1 Score=32.50 Aligned_cols=70 Identities=20% Similarity=0.279 Sum_probs=48.7
Q ss_pred CCCEEEEEcCCccHhHHHHHh----c-CC-eEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC-----CCCcce
Q 047897 30 PDDTVLEIGPGTGNLTLKLLE----V-SK-KVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE-----FPQFDL 98 (232)
Q Consensus 30 ~~~~vLDiG~G~G~~t~~l~~----~-~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~-----~~~~D~ 98 (232)
.+.+||=.| |+|.++..+++ . +. +|++++.++.-.+...+.+.. .++.++.+|+.+.. +..+|.
T Consensus 20 ~~k~vlVTG-atG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~----~~v~~~~~Dl~d~~~l~~~~~~~D~ 94 (344)
T 2gn4_A 20 DNQTILITG-GTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFND----PRMRFFIGDVRDLERLNYALEGVDI 94 (344)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCC----TTEEEEECCTTCHHHHHHHTTTCSE
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcC----CCEEEEECCCCCHHHHHHHHhcCCE
Confidence 456788666 56776666655 5 75 999999998766555544431 46999999998753 236798
Q ss_pred eecccC
Q 047897 99 VVANIP 104 (232)
Q Consensus 99 Vi~n~p 104 (232)
||.+..
T Consensus 95 Vih~Aa 100 (344)
T 2gn4_A 95 CIHAAA 100 (344)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 887654
No 489
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=82.29 E-value=4 Score=32.00 Aligned_cols=72 Identities=11% Similarity=0.185 Sum_probs=47.2
Q ss_pred CCCCEEEEEcCC----ccH-hHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC-----------
Q 047897 29 NPDDTVLEIGPG----TGN-LTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE----------- 92 (232)
Q Consensus 29 ~~~~~vLDiG~G----~G~-~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~----------- 92 (232)
-.+.++|=.|.+ .|. ++..+++.+.+|+.++.+. ..+.+++..... +++.++.+|+.+..
T Consensus 24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~l~~~~---~~~~~~~~Dl~~~~~v~~~~~~~~~ 99 (280)
T 3nrc_A 24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ-FKDRVEKLCAEF---NPAAVLPCDVISDQEIKDLFVELGK 99 (280)
T ss_dssp TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT-CHHHHHHHHGGG---CCSEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch-HHHHHHHHHHhc---CCceEEEeecCCHHHHHHHHHHHHH
Confidence 356788888843 342 6666667889999999987 222333332222 35889999998753
Q ss_pred -CCCcceeecccC
Q 047897 93 -FPQFDLVVANIP 104 (232)
Q Consensus 93 -~~~~D~Vi~n~p 104 (232)
++..|++|.|.-
T Consensus 100 ~~g~id~li~nAg 112 (280)
T 3nrc_A 100 VWDGLDAIVHSIA 112 (280)
T ss_dssp HCSSCCEEEECCC
T ss_pred HcCCCCEEEECCc
Confidence 235799888753
No 490
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=82.27 E-value=3.1 Score=34.02 Aligned_cols=72 Identities=17% Similarity=0.177 Sum_probs=48.9
Q ss_pred CCCEEEEEcCCccH---hHHHHHhcCCeEEEEEcCHHH-------HHHHHHHHhhcCCCccEEEEEcCCCCCC-------
Q 047897 30 PDDTVLEIGPGTGN---LTLKLLEVSKKVHAIEIDERM-------VEILNRRAADSGFHDRLNVISKDALKTE------- 92 (232)
Q Consensus 30 ~~~~vLDiG~G~G~---~t~~l~~~~~~v~~vD~~~~~-------~~~a~~~~~~~~~~~~~~~~~~D~~~~~------- 92 (232)
.+.++|=.|++.|. ++..+++.+.+|+.++.+++- ++.+.+.+...+ .++.++.+|+.+..
T Consensus 44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g--~~~~~~~~Dv~d~~~v~~~~~ 121 (346)
T 3kvo_A 44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVG--GKALPCIVDVRDEQQISAAVE 121 (346)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHH
Confidence 46788888877652 555566688999999988652 333334444444 57899999998753
Q ss_pred -----CCCcceeeccc
Q 047897 93 -----FPQFDLVVANI 103 (232)
Q Consensus 93 -----~~~~D~Vi~n~ 103 (232)
++..|++|.|.
T Consensus 122 ~~~~~~g~iDilVnnA 137 (346)
T 3kvo_A 122 KAIKKFGGIDILVNNA 137 (346)
T ss_dssp HHHHHHSCCCEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 12578888774
No 491
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=82.18 E-value=6.6 Score=30.11 Aligned_cols=71 Identities=14% Similarity=0.107 Sum_probs=47.2
Q ss_pred CCCEEEEEcCCccHhHHH----HHhcCCeEEEEEc-CHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCC-----------
Q 047897 30 PDDTVLEIGPGTGNLTLK----LLEVSKKVHAIEI-DERMVEILNRRAADSGFHDRLNVISKDALKTEF----------- 93 (232)
Q Consensus 30 ~~~~vLDiG~G~G~~t~~----l~~~~~~v~~vD~-~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~----------- 93 (232)
.+.++|=.|++ |.++.. +++.+.+|++++. +++..+...+.+...+ .++.++.+|+.+...
T Consensus 6 ~~k~vlITGas-ggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (261)
T 1gee_A 6 EGKVVVITGSS-TGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVG--GEAIAVKGDVTVESDVINLVQSAIKE 82 (261)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHH
Confidence 35677767754 444444 4447899999999 7766655555554433 468899999986521
Q ss_pred -CCcceeeccc
Q 047897 94 -PQFDLVVANI 103 (232)
Q Consensus 94 -~~~D~Vi~n~ 103 (232)
+..|+||.|.
T Consensus 83 ~g~id~li~~A 93 (261)
T 1gee_A 83 FGKLDVMINNA 93 (261)
T ss_dssp HSCCCEEEECC
T ss_pred cCCCCEEEECC
Confidence 2578888764
No 492
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=82.12 E-value=8.3 Score=30.35 Aligned_cols=73 Identities=14% Similarity=0.086 Sum_probs=48.7
Q ss_pred CCCEEEEEcCCccHhHHH----HHhcCCeEEEEEcCHHHHHHHHHHHhhcC---CCccEEEEEcCCCCCCC---------
Q 047897 30 PDDTVLEIGPGTGNLTLK----LLEVSKKVHAIEIDERMVEILNRRAADSG---FHDRLNVISKDALKTEF--------- 93 (232)
Q Consensus 30 ~~~~vLDiG~G~G~~t~~----l~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~~~~~~~D~~~~~~--------- 93 (232)
.+.++|=.|++ |.++.. +++.+.+|++++.+++..+.+.+.+.... ...++.++.+|+.+...
T Consensus 17 ~~k~vlVTGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 95 (303)
T 1yxm_A 17 QGQVAIVTGGA-TGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL 95 (303)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHH
Confidence 45678888864 444444 44478999999999877766555554310 11469999999987521
Q ss_pred ---CCcceeeccc
Q 047897 94 ---PQFDLVVANI 103 (232)
Q Consensus 94 ---~~~D~Vi~n~ 103 (232)
+..|+||.|.
T Consensus 96 ~~~g~id~li~~A 108 (303)
T 1yxm_A 96 DTFGKINFLVNNG 108 (303)
T ss_dssp HHHSCCCEEEECC
T ss_pred HHcCCCCEEEECC
Confidence 2478888764
No 493
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=82.11 E-value=6.4 Score=29.69 Aligned_cols=67 Identities=19% Similarity=0.219 Sum_probs=43.9
Q ss_pred CCCEEEEEcCCccHhHHHHH----hcCCeEEEEEcCHHHHHHHHHHHhhcCCCccE-EEEEcCCCCC---CCCCcceeec
Q 047897 30 PDDTVLEIGPGTGNLTLKLL----EVSKKVHAIEIDERMVEILNRRAADSGFHDRL-NVISKDALKT---EFPQFDLVVA 101 (232)
Q Consensus 30 ~~~~vLDiG~G~G~~t~~l~----~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~~D~~~~---~~~~~D~Vi~ 101 (232)
.+.+||=.|+ +|.++..++ +.+.+|++++.++.-.+.... .++ +++.+|+.+. .+...|.||.
T Consensus 20 ~~~~ilVtGa-tG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~--------~~~~~~~~~Dl~~~~~~~~~~~D~vi~ 90 (236)
T 3e8x_A 20 QGMRVLVVGA-NGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE--------RGASDIVVANLEEDFSHAFASIDAVVF 90 (236)
T ss_dssp -CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH--------TTCSEEEECCTTSCCGGGGTTCSEEEE
T ss_pred CCCeEEEECC-CChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh--------CCCceEEEcccHHHHHHHHcCCCEEEE
Confidence 4678887774 455555544 478999999999875543321 247 8999998721 1236799988
Q ss_pred ccCc
Q 047897 102 NIPY 105 (232)
Q Consensus 102 n~p~ 105 (232)
+...
T Consensus 91 ~ag~ 94 (236)
T 3e8x_A 91 AAGS 94 (236)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 7643
No 494
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=82.09 E-value=7.2 Score=29.97 Aligned_cols=69 Identities=22% Similarity=0.302 Sum_probs=50.2
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCC------------C
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEF------------P 94 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~------------~ 94 (232)
.+.++|=.|++.| .++..+++.+.+|++++.+++-++.+.+.. + .++.++.+|+.+... +
T Consensus 8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g 82 (261)
T 3n74_A 8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI---G--DAALAVAADISKEADVDAAVEAALSKFG 82 (261)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C--TTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---C--CceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 4668888887765 255666668899999999988776665544 2 468999999987531 2
Q ss_pred Ccceeeccc
Q 047897 95 QFDLVVANI 103 (232)
Q Consensus 95 ~~D~Vi~n~ 103 (232)
..|++|.|.
T Consensus 83 ~id~li~~A 91 (261)
T 3n74_A 83 KVDILVNNA 91 (261)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 568888774
No 495
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=82.08 E-value=6.2 Score=30.38 Aligned_cols=71 Identities=13% Similarity=0.209 Sum_probs=47.0
Q ss_pred CCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHH--HHHHHHHHhhcCCCccEEEEEcCCCCCC------------C
Q 047897 31 DDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERM--VEILNRRAADSGFHDRLNVISKDALKTE------------F 93 (232)
Q Consensus 31 ~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~--~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~ 93 (232)
+.++|=.|++.| .++..+++.+.+|++++.+++. .+...+.+...+ .++.++.+|+.+.. +
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 79 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAAD--QKAVFVGLDVTDKANFDSAIDEAAEKL 79 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 356777776544 2444455578999999998765 554444444433 46889999998753 1
Q ss_pred CCcceeeccc
Q 047897 94 PQFDLVVANI 103 (232)
Q Consensus 94 ~~~D~Vi~n~ 103 (232)
+..|++|.|.
T Consensus 80 g~iD~lv~nA 89 (258)
T 3a28_C 80 GGFDVLVNNA 89 (258)
T ss_dssp TCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 2578888874
No 496
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=82.02 E-value=6.6 Score=31.14 Aligned_cols=74 Identities=18% Similarity=0.349 Sum_probs=49.2
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCC-CccEEEEEcCCCCCC------------C
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGF-HDRLNVISKDALKTE------------F 93 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~~~D~~~~~------------~ 93 (232)
.+.++|=.|++.| .++..+++.+.+|++++.+++-++...+.+...+. ..++.++.+|+.+.. +
T Consensus 25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 104 (297)
T 1xhl_A 25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF 104 (297)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 4567777776544 24444455789999999998777666555544331 116899999998753 1
Q ss_pred CCcceeeccc
Q 047897 94 PQFDLVVANI 103 (232)
Q Consensus 94 ~~~D~Vi~n~ 103 (232)
+..|++|.|.
T Consensus 105 g~iD~lvnnA 114 (297)
T 1xhl_A 105 GKIDILVNNA 114 (297)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 2578888874
No 497
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=81.77 E-value=6.9 Score=30.19 Aligned_cols=71 Identities=15% Similarity=0.097 Sum_probs=47.5
Q ss_pred CCCEEEEEcCCccHhHHHHH----hcCCeEEEEEc-CHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCC-----------
Q 047897 30 PDDTVLEIGPGTGNLTLKLL----EVSKKVHAIEI-DERMVEILNRRAADSGFHDRLNVISKDALKTEF----------- 93 (232)
Q Consensus 30 ~~~~vLDiG~G~G~~t~~l~----~~~~~v~~vD~-~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~----------- 93 (232)
.+.++|=.|+ +|.++..++ +.+.+|++++. ++...+...+.+...+ .++.++.+|+.+...
T Consensus 20 ~~k~vlItGa-sggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 96 (274)
T 1ja9_A 20 AGKVALTTGA-GRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLG--AQGVAIQADISKPSEVVALFDKAVSH 96 (274)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 3567886665 455555544 47889999998 7766665555554444 468899999987531
Q ss_pred -CCcceeeccc
Q 047897 94 -PQFDLVVANI 103 (232)
Q Consensus 94 -~~~D~Vi~n~ 103 (232)
...|.||.|.
T Consensus 97 ~~~~d~vi~~A 107 (274)
T 1ja9_A 97 FGGLDFVMSNS 107 (274)
T ss_dssp HSCEEEEECCC
T ss_pred cCCCCEEEECC
Confidence 2568888764
No 498
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=81.72 E-value=7.5 Score=30.45 Aligned_cols=70 Identities=17% Similarity=0.226 Sum_probs=47.8
Q ss_pred CCEEEEEcCCccHhHHHHH----hcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCC------------CC
Q 047897 31 DDTVLEIGPGTGNLTLKLL----EVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTE------------FP 94 (232)
Q Consensus 31 ~~~vLDiG~G~G~~t~~l~----~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------------~~ 94 (232)
+.++|=.|++ |.++..++ +.+.+|++++.+++-.+.+.+.+...+ .++.++.+|+.+.. ++
T Consensus 44 ~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~d~~~v~~~~~~~~~~~~ 120 (285)
T 2c07_A 44 NKVALVTGAG-RGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFG--YESSGYAGDVSKKEEISEVINKILTEHK 120 (285)
T ss_dssp SCEEEEESTT-SHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcC--CceeEEECCCCCHHHHHHHHHHHHHhcC
Confidence 5678877765 45444444 468899999988776666555555433 46889999998752 13
Q ss_pred Ccceeeccc
Q 047897 95 QFDLVVANI 103 (232)
Q Consensus 95 ~~D~Vi~n~ 103 (232)
..|.||.|.
T Consensus 121 ~id~li~~A 129 (285)
T 2c07_A 121 NVDILVNNA 129 (285)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 578888774
No 499
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=81.37 E-value=4.5 Score=30.93 Aligned_cols=72 Identities=15% Similarity=0.145 Sum_probs=47.3
Q ss_pred CCCEEEEEcCCccHhHHHHH----hcCCeEEEEEcC-HHHHHHHHHHHhhcCCCccEEEEEcCCCCCCC-----------
Q 047897 30 PDDTVLEIGPGTGNLTLKLL----EVSKKVHAIEID-ERMVEILNRRAADSGFHDRLNVISKDALKTEF----------- 93 (232)
Q Consensus 30 ~~~~vLDiG~G~G~~t~~l~----~~~~~v~~vD~~-~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~----------- 93 (232)
.+.++|=.|+ +|.++..++ +.+.+|++++.+ ++-++.+.+.+...+ .++.++.+|+.+...
T Consensus 6 ~~k~vlVTGa-sggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (258)
T 3afn_B 6 KGKRVLITGS-SQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADG--GDAAFFAADLATSEACQQLVDEFVAK 82 (258)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHH
Confidence 3567776665 455555544 478999999988 655555544444433 579999999987531
Q ss_pred -CCcceeecccC
Q 047897 94 -PQFDLVVANIP 104 (232)
Q Consensus 94 -~~~D~Vi~n~p 104 (232)
+..|.||.|.-
T Consensus 83 ~g~id~vi~~Ag 94 (258)
T 3afn_B 83 FGGIDVLINNAG 94 (258)
T ss_dssp HSSCSEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 25788887653
No 500
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=81.36 E-value=6.9 Score=30.60 Aligned_cols=71 Identities=21% Similarity=0.292 Sum_probs=48.1
Q ss_pred CCCEEEEEcCCcc---HhHHHHHhcCCeEEEEEcCHHHHHHHHHHHhhcCCCccEEEEEcCCCCCCC-----------CC
Q 047897 30 PDDTVLEIGPGTG---NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEF-----------PQ 95 (232)
Q Consensus 30 ~~~~vLDiG~G~G---~~t~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~~-----------~~ 95 (232)
.+.++|=.|++.| .++..+++.+.+|++++.++...+.+.+ +...+ .++.++.+|+.+... ..
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~-~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~g~ 106 (273)
T 3uf0_A 30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADE-IADGG--GSAEAVVADLADLEGAANVAEELAATRR 106 (273)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHH-HHTTT--CEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHH-HHhcC--CcEEEEEecCCCHHHHHHHHHHHHhcCC
Confidence 4678888887665 2555566688999999966554444433 33333 578999999987531 25
Q ss_pred cceeeccc
Q 047897 96 FDLVVANI 103 (232)
Q Consensus 96 ~D~Vi~n~ 103 (232)
.|++|.|.
T Consensus 107 iD~lv~nA 114 (273)
T 3uf0_A 107 VDVLVNNA 114 (273)
T ss_dssp CCEEEECC
T ss_pred CcEEEECC
Confidence 78888774
Done!