RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 047897
(232 letters)
>d1i4wa_ c.66.1.24 (A:) Transcription factor sc-mtTFB {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 322
Score = 154 bits (389), Expect = 3e-46
Identities = 42/273 (15%), Positives = 77/273 (28%), Gaps = 64/273 (23%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINP------DDTVLEIGPGTGNLTLKLLEVS--KKV 55
G L N V + I K + + VL++ PG G + ++
Sbjct: 11 LKFFYGFKYLWNPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQY 70
Query: 56 HAIEIDERMVEILNRRAADSGFHDRLNVISKDALK---------------------TEFP 94
+E + + LN + L ++ +D
Sbjct: 71 SLLEKRSSLYKFLNAKFEG----SPLQILKRDPYDWSTYSNLIDEERIFVPEVQSSDHIN 126
Query: 95 QFDLVVANIPYGISSPLVAKLVYGTKS--------FRSATLLLQKEFARRLLASPGDSEF 146
L VAN+ S L+ + + + L + AR+LLA PG
Sbjct: 127 DKFLTVANVTGEGSEGLIMQWLSCIGNKNWLYRFGKVKMLLWMPSTTARKLLARPGMHSR 186
Query: 147 NRLAVNVKLVADVEFV---------------------MDVSKRDFLPCPKVDSSVVIIRP 185
++ +V + D + + + S + P ++V +
Sbjct: 187 SKCSVVREAFTDTKLIAISDANELKGFDSQCIEEWDPILFSAAEIWPTKGKPIALVEM-- 244
Query: 186 KAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQ 218
D ++D W TR K L
Sbjct: 245 DPIDFDFDVDNWDYVTRHLMILKRTPLNTVMDS 277
>d1zq9a1 c.66.1.24 (A:36-313) Probable dimethyladenosine transferase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 278
Score = 148 bits (375), Expect = 1e-44
Identities = 105/216 (48%), Positives = 140/216 (64%)
Query: 10 QHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILN 69
QHIL N +++SI+ K+++ P D VLE+GPGTGN+T+KLLE +KKV A E+D R+V L+
Sbjct: 1 QHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELH 60
Query: 70 RRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLL 129
+R + +L V+ D LKT+ P FD VAN+PY ISSP V KL+ FR A L+
Sbjct: 61 KRVQGTPVASKLQVLVGDVLKTDLPFFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMF 120
Query: 130 QKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAEI 189
Q+EFA RL+A PGD + RL++N +L+A V+ +M V K +F P PKV+SSVV I PK
Sbjct: 121 QREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVVRIEPKNPP 180
Query: 190 PDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIEL 225
P +N EW R F +KNKTL A FK L
Sbjct: 181 PPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLL 216
>d1qyra_ c.66.1.24 (A:) High level kasugamycin resistance protein
KsgA {Escherichia coli [TaxId: 562]}
Length = 252
Score = 122 bits (306), Expect = 8e-35
Identities = 63/231 (27%), Positives = 102/231 (44%), Gaps = 8/231 (3%)
Query: 10 QHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILN 69
Q+ L +Q V+DSIV + ++EIGPG LT + E ++ IE+D + L
Sbjct: 1 QNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQ 60
Query: 70 RRAADSGFHDRLNV----ISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSA 125
+ L + Q V N+PY IS+PL+ L T +
Sbjct: 61 THPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADM 120
Query: 126 TLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRP 185
+LQKE RL+A P + RL+V + +V V++V F P PKVDS+VV + P
Sbjct: 121 HFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVP 180
Query: 186 KAEIP--DVNLDEWRAFTRTCFSKKNKTLGATFKQ--KKKVIELLRLSKQK 232
A +P ++ T F+++ KT+ + +V+ + +
Sbjct: 181 HATMPHPVKDVRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTGMGIDPAM 231
>d1yuba_ c.66.1.24 (A:) rRNA adenine dimethylase {Streptococcus
pneumoniae, Ermam [TaxId: 1313]}
Length = 245
Score = 107 bits (267), Expect = 5e-29
Identities = 54/226 (23%), Positives = 114/226 (50%), Gaps = 14/226 (6%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
Q+ LT+++VL+ I+++ ++ DTV EIG G G+LT KL ++SK+V +IE+D + +
Sbjct: 8 SQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLS 67
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQFD--LVVANIPYGISSPLVAKLVYGTKSFRSAT 126
+ + + ++ +D L+ +FP +V NIPY +S+ ++ K+V+ +++
Sbjct: 68 SEKLKLNTRVTLIH---QDILQFQFPNKQRYKIVGNIPYHLSTQIIKKVVFESRASDIYL 124
Query: 127 LLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVV-IIRP 185
++ + + R L + + ++ ++ + F P PKV+S ++ + R
Sbjct: 125 IVEEGFYKR------TLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRH 178
Query: 186 KAEIPDVNLDEWRAFTRTCFSKKNKTL--GATFKQKKKVIELLRLS 229
++PD + F +++ + L F Q K ++ LS
Sbjct: 179 TTDVPDKYWKLYTYFVSKWVNREYRQLFTKNQFHQAMKHAKVNNLS 224
>d1qama_ c.66.1.24 (A:) rRNA adenine dimethylase {Bacillus subtilis,
Ermc' [TaxId: 1423]}
Length = 235
Score = 101 bits (253), Expect = 5e-27
Identities = 56/206 (27%), Positives = 104/206 (50%), Gaps = 12/206 (5%)
Query: 10 QHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILN 69
Q+ +T++ +D I+ +N D + EIG G G+ TL+L++ V AIEID ++ +
Sbjct: 1 QNFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTE 60
Query: 70 RRAADSGFHDRLNVISKDALKTEFPQF--DLVVANIPYGISSPLVAKLVYGTKSFRSATL 127
+ D V++KD L+ +FP+ + NIPY IS+ ++ K+V+ + L
Sbjct: 61 NKLVDHDNF---QVLNKDILQFKFPKNQSYKIFGNIPYNISTDIIRKIVFDSI-ADEIYL 116
Query: 128 LLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKA 187
+++ FA+RL + LA+ + D+ + V + F P PKV+SS++ + K
Sbjct: 117 IVEYGFAKRL-----LNTKRSLALFLMAEVDISILSMVPREYFHPKPKVNSSLIRLNRKK 171
Query: 188 E-IPDVNLDEWRAFTRTCFSKKNKTL 212
I + ++ F +K+ K +
Sbjct: 172 SRISHKDKQKYNYFVMKWVNKEYKKI 197
>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT)
{Archaeon Methanobacterium thermoautotrophicum [TaxId:
145262]}
Length = 186
Score = 61.0 bits (147), Expect = 3e-12
Identities = 37/155 (23%), Positives = 61/155 (39%), Gaps = 7/155 (4%)
Query: 4 FHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDER 63
F K+ T V I+ + +D +++G GTG +TL+L ++V+AI+ +
Sbjct: 7 FIKNPSVPGPTAMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPE 66
Query: 64 MVEILNRRAADSGFHDRLNVISKDA--LKTEFPQFDLVVANIPYG----ISSPLVAKLVY 117
+ G D + ++ DA + P D+ V G I + KL
Sbjct: 67 AISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDIDIAVVGGSGGELQEILRIIKDKLKP 126
Query: 118 GTKSFRSATLLLQKEFARRLLASPG-DSEFNRLAV 151
G + +A LL K A L G D L +
Sbjct: 127 GGRIIVTAILLETKFEAMECLRDLGFDVNITELNI 161
>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus
halodurans [TaxId: 86665]}
Length = 231
Score = 48.5 bits (114), Expect = 1e-07
Identities = 10/49 (20%), Positives = 28/49 (57%)
Query: 19 LDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEI 67
L +++ +++ ++ VL++ G G++ KKV A ++ E ++++
Sbjct: 4 LAKLMQIAALKGNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKV 52
>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone
methyltransferase Dot1l {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 406
Score = 48.1 bits (114), Expect = 3e-07
Identities = 10/82 (12%), Positives = 29/82 (35%), Gaps = 2/82 (2%)
Query: 14 TNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRR 71
L + ++ + DT +++G G GN ++ EI + ++ +
Sbjct: 200 LLPNFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQ 259
Query: 72 AADSGFHDRLNVISKDALKTEF 93
+ +L + + ++
Sbjct: 260 YEELKKRCKLYGMRLNNVEFSL 281
>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 324
Score = 47.5 bits (112), Expect = 4e-07
Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Query: 22 IVRKSSINPDDTVLEIGPGTGNLTLKLLE---VSKKVHAIEIDERMVEILNRRAADSGFH 78
I+ INP DTVLE G G+G ++L L + +V + E+ + ++ +
Sbjct: 90 ILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDS 149
Query: 79 DRLNVISKDALKTEFPQFDL 98
+L+ + + +F D+
Sbjct: 150 WKLSHVEEWPDNVDFIHKDI 169
>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus
subtilis [TaxId: 1423]}
Length = 234
Score = 46.9 bits (110), Expect = 5e-07
Identities = 9/46 (19%), Positives = 21/46 (45%)
Query: 19 LDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERM 64
L +++ + + VL+IG G G+ L ++ ++ + M
Sbjct: 5 LGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEM 50
>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone
methyltransferase Dot1l {Human (Homo sapiens) [TaxId:
9606]}
Length = 328
Score = 47.1 bits (111), Expect = 5e-07
Identities = 12/101 (11%), Positives = 37/101 (36%), Gaps = 4/101 (3%)
Query: 14 TNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVS--KKVHAIEIDERMVEILNRR 71
T+ ++ ++ + + DD +++G G G + L++ + K + +E + +
Sbjct: 135 TSFDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETM 194
Query: 72 AADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLV 112
+ + + + D + I++ V
Sbjct: 195 DREFRKWMKWYGKKHA--EYTLERGDFLSEEWRERIANTSV 233
>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852
{Thermoplasma acidophilum [TaxId: 2303]}
Length = 250
Score = 46.2 bits (109), Expect = 7e-07
Identities = 12/66 (18%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Query: 22 IVRKSSINPDDTVLEIGPGTGNLTLKLLE---VSKKVHAIEIDERMVEILNRRAADSGFH 78
I+ + + P +LE+G G+GN++ +L + +E DE ++ ++
Sbjct: 77 IIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI 136
Query: 79 DRLNVI 84
+
Sbjct: 137 GNVRTS 142
>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase
3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 311
Score = 46.4 bits (109), Expect = 9e-07
Identities = 18/83 (21%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Query: 15 NQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV-SKKVHAIEIDERMVEILNRRAA 73
+ D I + I D VL++G GTG L++ + +KKV ++ E + + ++
Sbjct: 20 TESYRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAMDIIRL 79
Query: 74 DSGFHDRLNVISKDALKTEFPQF 96
+ D + +I + P
Sbjct: 80 N-KLEDTITLIKGKIEEVHLPVE 101
>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase
{Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}
Length = 252
Score = 45.3 bits (106), Expect = 1e-06
Identities = 13/75 (17%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Query: 21 SIVRKSSINPDDTVLEIGPGTGNLTLKLLEVS-KKVHAIEIDERMVEILNRRAADSGFHD 79
+ + + D+VL++G G G LK + + ++I E + RA +
Sbjct: 15 ACLIRLYTKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRF 74
Query: 80 RLNVISKDALKTEFP 94
++ ++D+
Sbjct: 75 KVFFRAQDSYGRHMD 89
>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli
[TaxId: 562]}
Length = 245
Score = 45.0 bits (105), Expect = 3e-06
Identities = 20/105 (19%), Positives = 40/105 (38%), Gaps = 5/105 (4%)
Query: 3 FFHKSKGQHILTN---QRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLE-VSKKVHAI 58
F S+ +H + N + ++ R + P +L++G G+G + I
Sbjct: 3 IFTISESEHRIHNPFTEEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGI 62
Query: 59 EIDERMVEILNRRAADSGFHDRLNVISKDAL-KTEFPQFDLVVAN 102
++ RRA + G +R++ I DA + D+
Sbjct: 63 DMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVANEKCDVAACV 107
>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus
jannaschii [TaxId: 2190]}
Length = 230
Score = 44.3 bits (104), Expect = 3e-06
Identities = 12/72 (16%), Positives = 24/72 (33%), Gaps = 2/72 (2%)
Query: 28 INPDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAADSGFHDRLNVIS 85
I D +L +G G + ++ V+AIE R++ L A+ + +
Sbjct: 72 IKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDA 131
Query: 86 KDALKTEFPQFD 97
+
Sbjct: 132 NKPQEYANIVEK 143
>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 328
Score = 44.9 bits (105), Expect = 3e-06
Identities = 16/78 (20%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 20 DSIVRKSSINPDDTVLEIGPGTGNLTLKLLE-VSKKVHAIEIDERMVEILNRRAADSGFH 78
++I++ + D VL++G GTG L++ + +K V +++ ++E+ +GF
Sbjct: 28 NAIIQNKDLFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFS 86
Query: 79 DRLNVISKDALKTEFPQF 96
D++ ++ P
Sbjct: 87 DKITLLRGKLEDVHLPFP 104
>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 316
Score = 44.0 bits (103), Expect = 6e-06
Identities = 16/79 (20%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Query: 20 DSIVRKSSINPDDTVLEIGPGTGNLTLKLLEV-SKKVHAIEIDERMVEILNRRAADSGFH 78
+S+ + D VL++G GTG L + + ++KV IE + + + +
Sbjct: 23 NSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLD 81
Query: 79 DRLNVISKDALKTEFPQFD 97
+ +I + E P
Sbjct: 82 HVVTIIKGKVEEVELPVEK 100
>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus
fulgidus [TaxId: 2234]}
Length = 209
Score = 42.8 bits (100), Expect = 1e-05
Identities = 14/80 (17%), Positives = 29/80 (36%), Gaps = 5/80 (6%)
Query: 28 INPDDTVLEIGPGTGNLTLKL--LEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVIS 85
+ D+ VL +G +G L + ++A+E + E L + + +
Sbjct: 54 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVR---ERNNIIPLL 110
Query: 86 KDALKTEFPQFDLVVANIPY 105
DA K + ++ Y
Sbjct: 111 FDASKPWKYSGIVEKVDLIY 130
>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793
{Pyrococcus horikoshii [TaxId: 53953]}
Length = 260
Score = 42.5 bits (99), Expect = 1e-05
Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 2/81 (2%)
Query: 28 INPDDTVLEIGPGTGNLTLKLLEVSK-KVHAIEIDERMVEILNRRAADSGFHDRLNVISK 86
PD+ V+++ G G+L+L + K KV AIE D + L + DR++ +
Sbjct: 105 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNM 164
Query: 87 DALKT-EFPQFDLVVANIPYG 106
D D ++
Sbjct: 165 DNRDFPGENIADRILMGYVVR 185
>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 264
Score = 42.7 bits (100), Expect = 1e-05
Identities = 24/90 (26%), Positives = 34/90 (37%), Gaps = 7/90 (7%)
Query: 22 IVRKSSINPDDTVLEIGPGTGNLTLKLLEV---SKKVHAIEIDERMVEIL--NRRAADSG 76
IV + I P VLE G G+G LTL LL + +V + E E N
Sbjct: 88 IVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQ 147
Query: 77 FHDRLNVISKDALKTEF--PQFDLVVANIP 104
D ++ D +E D V ++
Sbjct: 148 PPDNWRLVVSDLADSELPDGSVDRAVLDML 177
>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga
maritima [TaxId: 2336]}
Length = 266
Score = 40.9 bits (95), Expect = 5e-05
Identities = 19/125 (15%), Positives = 39/125 (31%), Gaps = 7/125 (5%)
Query: 2 IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLE---VSKKVHAI 58
+ + I+ + I + D +++ G G+G + L S KV A
Sbjct: 76 EIMNMKRRTQIVYPKDS-SFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAY 134
Query: 59 EIDERMVEILNRRAADSGFHDRLNVISKDA---LKTEFPQFDLVVANIPYGISSPLVAKL 115
E E ++ G +R+ + +D + + P+ L
Sbjct: 135 EKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEKDVDALFLDVPDPWNYIDKCWEAL 194
Query: 116 VYGTK 120
G +
Sbjct: 195 KGGGR 199
>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus
horikoshii [TaxId: 53953]}
Length = 227
Score = 39.3 bits (91), Expect = 1e-04
Identities = 12/79 (15%), Positives = 26/79 (32%), Gaps = 3/79 (3%)
Query: 28 INPDDTVLEIGPGTGNLTLKLLEV---SKKVHAIEIDERMVEILNRRAADSGFHDRLNVI 84
I P +VL +G +G + ++ K+ IE R++ L + +
Sbjct: 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGD 130
Query: 85 SKDALKTEFPQFDLVVANI 103
+ + + V
Sbjct: 131 ATKPEEYRALVPKVDVIFE 149
>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase
{Pseudomonas syringae [TaxId: 317]}
Length = 201
Score = 37.8 bits (86), Expect = 4e-04
Identities = 11/62 (17%), Positives = 15/62 (24%)
Query: 19 LDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFH 78
L ++ P VL G L V E+ E VE +
Sbjct: 9 LQQYWSSLNVVPGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHI 68
Query: 79 DR 80
Sbjct: 69 TS 70
>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase,
INMT {Human (Homo sapiens) [TaxId: 9606]}
Length = 257
Score = 38.1 bits (87), Expect = 5e-04
Identities = 11/69 (15%), Positives = 22/69 (31%), Gaps = 1/69 (1%)
Query: 25 KSSINPDDTVLEIGPGTGNLTLKL-LEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNV 83
DT+++IG G + + + + + +R E L +
Sbjct: 46 GPGGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTP 105
Query: 84 ISKDALKTE 92
K A + E
Sbjct: 106 AVKFACELE 114
>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase
{Sulfolobus tokodaii [TaxId: 111955]}
Length = 224
Score = 37.1 bits (85), Expect = 8e-04
Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 9 GQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEIL 68
G + T + ++ + ++ VLEIG G G T + E+ KV ++EI+E+M
Sbjct: 50 GINT-TALNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYA 108
Query: 69 NRRAADSGFHD 79
++ +
Sbjct: 109 SKLLSYYNNIK 119
>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 292
Score = 37.2 bits (85), Expect = 0.001
Identities = 10/94 (10%), Positives = 32/94 (34%)
Query: 16 QRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADS 75
++ + VL++ GTG ++ L+E V +++ ++M++ + +
Sbjct: 42 AEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNR 101
Query: 76 GFHDRLNVISKDALKTEFPQFDLVVANIPYGISS 109
+ + D+ + +
Sbjct: 102 RKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVIC 135
>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 280
Score = 36.5 bits (83), Expect = 0.002
Identities = 15/106 (14%), Positives = 33/106 (31%), Gaps = 18/106 (16%)
Query: 15 NQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKK--------VHAIEIDERMVE 66
++++ I R + +L IG G G + L++L + +E +
Sbjct: 25 DKKLPGIIGRIGDTKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIA 84
Query: 67 ILNRRAADSGFHDRLN----------VISKDALKTEFPQFDLVVAN 102
A + + S+ K E ++D +
Sbjct: 85 KYKELVAKISNLENVKFAWHKETSSEYQSRMLEKKELQKWDFIHMI 130
>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738
{Erwinia carotovora [TaxId: 554]}
Length = 225
Score = 36.1 bits (82), Expect = 0.002
Identities = 9/39 (23%), Positives = 16/39 (41%)
Query: 26 SSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERM 64
+ +LE+G G+ T +L E + +E E
Sbjct: 16 TPFFRPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEA 54
>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 224
Score = 35.6 bits (81), Expect = 0.003
Identities = 10/54 (18%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Query: 28 INPDDTVLEIGPGTGNLTL---KLLEVSKKVHAIEIDERMVEILNRRAADSGFH 78
++ L++G G+G LT +++ + KV I+ + +V+
Sbjct: 74 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPT 127
>d2ih2a1 c.66.1.27 (A:21-243) DNA methylase TaqI, N-terminal
domain {Thermus aquaticus [TaxId: 271]}
Length = 223
Score = 35.1 bits (79), Expect = 0.004
Identities = 14/88 (15%), Positives = 26/88 (29%), Gaps = 3/88 (3%)
Query: 12 ILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLE---VSKKVHAIEIDERMVEIL 68
+ T V+D +V + VLE G E + + +EID + +++
Sbjct: 1 VETPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP 60
Query: 69 NRRAADSGFHDRLNVISKDALKTEFPQF 96
L P +
Sbjct: 61 PWAEGILADFLLWEPGEAFDLILGNPPY 88
>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305
{Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Length = 251
Score = 35.1 bits (79), Expect = 0.005
Identities = 14/64 (21%), Positives = 31/64 (48%)
Query: 1 YIFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEI 60
Y ++ + + + ++ I ++ + VL++ GTG TL+L E +V +++
Sbjct: 12 YDTIYRRRIERVKAEIDFVEEIFKEDAKREVRRVLDLACGTGIPTLELAERGYEVVGLDL 71
Query: 61 DERM 64
E M
Sbjct: 72 HEEM 75
>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine
N-methyltransferase, PNMTase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 263
Score = 34.4 bits (78), Expect = 0.007
Identities = 10/81 (12%), Positives = 22/81 (27%), Gaps = 7/81 (8%)
Query: 3 FFHKSKGQHILTNQRVLDSIVR------KSSINPDDTVLEIGPGTGNLTLKLL-EVSKKV 55
+ + V +R + T+++IG G L + +
Sbjct: 21 NNYAPPRGDLCNPNGVGPWKLRCLAQTFATGEVSGRTLIDIGSGPTVYQLLSACSHFEDI 80
Query: 56 HAIEIDERMVEILNRRAADSG 76
+ E + L R +
Sbjct: 81 TMTDFLEVNRQELGRWLQEEP 101
>d1eg2a_ c.66.1.11 (A:) m.RsrI N6 adenosine-specific DNA
methyltransferase {Rhodobacter sphaeroides [TaxId:
1063]}
Length = 279
Score = 34.3 bits (77), Expect = 0.008
Identities = 12/81 (14%), Positives = 28/81 (34%), Gaps = 9/81 (11%)
Query: 26 SSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVIS 85
+ +P TVL+ G+G ++ + + E + +L +
Sbjct: 203 ALSHPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQK---------QLTFLQ 253
Query: 86 KDALKTEFPQFDLVVANIPYG 106
D L + +++V +G
Sbjct: 254 DDGLIDKARSYEIVEGAANFG 274
>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus
cereus [TaxId: 1396]}
Length = 281
Score = 33.7 bits (76), Expect = 0.012
Identities = 12/56 (21%), Positives = 22/56 (39%), Gaps = 4/56 (7%)
Query: 15 NQRVLDSIVRK-SSINPDDTVLEIGPGTGNLTLKLLEVSK---KVHAIEIDERMVE 66
N + +V I +++ G G G L L L+ + K I+ E ++
Sbjct: 11 NDDYVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLA 66
>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371
{Clostridium acetobutylicum [TaxId: 1488]}
Length = 246
Score = 33.1 bits (74), Expect = 0.020
Identities = 13/62 (20%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Query: 17 RVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSG 76
+ ++++ D L++ GTGNLT L K A+++ + M+ + G
Sbjct: 25 DFIIEKCVENNLVFD-DYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQG 83
Query: 77 FH 78
Sbjct: 84 LK 85
>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB
{Salmonella typhimurium [TaxId: 90371]}
Length = 198
Score = 32.2 bits (72), Expect = 0.033
Identities = 17/100 (17%), Positives = 36/100 (36%), Gaps = 5/100 (5%)
Query: 3 FFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDE 62
+F + G R ++ + + L++G G G +L L V A + +
Sbjct: 8 YFTEKYGLT-----RTHSDVLAAAKVVAPGRTLDLGCGNGRNSLYLAANGYDVTAWDKNP 62
Query: 63 RMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVAN 102
+ L R A G + + T ++D +++
Sbjct: 63 ASMANLERIKAAEGLDNLQTDLVDLNTLTFDGEYDFILST 102
>d2h00a1 c.66.1.54 (A:5-254) Methyltransferase 10 domain containing
protein METT10D {Human (Homo sapiens) [TaxId: 9606]}
Length = 250
Score = 31.3 bits (70), Expect = 0.068
Identities = 13/100 (13%), Positives = 28/100 (28%), Gaps = 12/100 (12%)
Query: 18 VLDSIVRKSSINPDDTVLEIGPGTGN----LTLKLLEVSKKVHAIEIDERMVEILNRRAA 73
++ ++ + I GTG L A E+D+ +
Sbjct: 47 WVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVE 106
Query: 74 DSGFHDRLNV--------ISKDALKTEFPQFDLVVANIPY 105
+ D + V + + +D + N P+
Sbjct: 107 QNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFCMCNPPF 146
>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 197
Score = 30.5 bits (68), Expect = 0.12
Identities = 12/49 (24%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Query: 31 DDTVLEIGPGTGNLTLKLLEVS-KKVHAIEIDERMVEILNRRAADSGFH 78
+V++ G G G L + + V A +ID +E R F
Sbjct: 49 GRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCGGVNFM 97
>d1yzha1 c.66.1.53 (A:8-211) tRNA
(guanine-N(7)-)-methyltransferase TrmB {Streptococcus
pneumoniae [TaxId: 1313]}
Length = 204
Score = 29.9 bits (66), Expect = 0.18
Identities = 8/36 (22%), Positives = 17/36 (47%)
Query: 29 NPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERM 64
N + +E+G G G + + + ++ I ID +
Sbjct: 30 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQK 65
>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB
{Streptomyces purpurascens [TaxId: 1924]}
Length = 256
Score = 29.9 bits (66), Expect = 0.22
Identities = 18/85 (21%), Positives = 30/85 (35%), Gaps = 1/85 (1%)
Query: 16 QRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAI-EIDERMVEILNRRAAD 74
++ + VL++G G G + + + + E RR AD
Sbjct: 67 DLAYEAPADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVELAGPAERARRRFAD 126
Query: 75 SGFHDRLNVISKDALKTEFPQFDLV 99
+G DR+ V D K D+V
Sbjct: 127 AGLADRVTVAEGDFFKPLPVTADVV 151
>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia
coli [TaxId: 562]}
Length = 268
Score = 29.9 bits (66), Expect = 0.24
Identities = 12/87 (13%), Positives = 27/87 (31%), Gaps = 2/87 (2%)
Query: 16 QRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADS 75
+ + + +R+ + VL+IG G G T + ++ +D V I
Sbjct: 70 RDAIVAQLRERLDDKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYP 129
Query: 76 GFHDRLNVISKDALKTEFPQFDLVVAN 102
+ + D ++
Sbjct: 130 QVTFCVASSHRLPFSDT--SMDAIIRI 154
>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa
(LmjF30.0810) {Leishmania major [TaxId: 5664]}
Length = 254
Score = 29.6 bits (65), Expect = 0.27
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 34 VLEIGPGTGNLTLKLLE-VSKKVHAIEIDERMVE 66
L+ G G G +T LL + +E + M+E
Sbjct: 97 ALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLE 130
>d2bb3a1 c.90.1.1 (A:1-195) Precorrin-6y methylase CbiE
{Archaeoglobus fulgidus [TaxId: 2234]}
Length = 195
Score = 29.4 bits (65), Expect = 0.29
Identities = 7/38 (18%), Positives = 13/38 (34%)
Query: 37 IGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAAD 74
G G T + E+ ++ I R +E+
Sbjct: 7 SGTCRGQTTERAKEIIERAEVIYGSRRALELAGVVDDS 44
>d2py6a1 c.66.1.56 (A:14-408) Methyltransferase FkbM
{Methylobacillus flagellatus [TaxId: 405]}
Length = 395
Score = 29.6 bits (66), Expect = 0.32
Identities = 10/62 (16%), Positives = 23/62 (37%), Gaps = 4/62 (6%)
Query: 27 SINPDDTVLEIGPGTGNLTLKLLEVS----KKVHAIEIDERMVEILNRRAADSGFHDRLN 82
+ + +++ G G L+ V+ ++V IE D ++ L + +
Sbjct: 209 RFSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFAS 268
Query: 83 VI 84
I
Sbjct: 269 RI 270
>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase
{Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 215
Score = 29.0 bits (64), Expect = 0.42
Identities = 16/82 (19%), Positives = 28/82 (34%)
Query: 29 NPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDA 88
P +LE+G G+G + E+ K + +R + ++VI D
Sbjct: 77 KPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDG 136
Query: 89 LKTEFPQFDLVVANIPYGISSP 110
K P+ V + G
Sbjct: 137 SKGFPPKAPYDVIIVTAGAPKI 158
>d2oyra1 c.66.1.55 (A:1-250) Hypothetical protein YhiQ {Shigella
flexneri [TaxId: 623]}
Length = 250
Score = 28.1 bits (62), Expect = 0.81
Identities = 21/119 (17%), Positives = 41/119 (34%), Gaps = 14/119 (11%)
Query: 1 YIFFHKSKGQHILTNQRVL-DSIVRKSSINPD--DTVLEIGPGTGNLTLKLLEVSKKVHA 57
++ F H +++ + I D V++ G G L V +V
Sbjct: 56 FVDFVGGAMAHRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGCRVRM 115
Query: 58 IEIDERMVEILN---RRAADSG-----FHDRLNVI---SKDALKTEFPQFDLVVANIPY 105
+E + + +L+ R +RL +I S AL P+ +V + +
Sbjct: 116 LERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVVYLDPMF 174
>d2fcaa1 c.66.1.53 (A:10-213) tRNA
(guanine-N(7)-)-methyltransferase TrmB {Bacillus
subtilis [TaxId: 1423]}
Length = 204
Score = 27.5 bits (60), Expect = 0.98
Identities = 9/52 (17%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Query: 29 NPDDTVLEIGPGTGNLTLKLLEV--SKKVHAIEIDERMVEILNRRAADSGFH 78
N + +E+G G G + + IE+ + ++ ++ DS
Sbjct: 28 NDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQ 79
>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 309
Score = 27.4 bits (60), Expect = 1.4
Identities = 15/103 (14%), Positives = 35/103 (33%), Gaps = 9/103 (8%)
Query: 15 NQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAAD 74
+ L + V + VL + TG +L +V ++ ++ +
Sbjct: 119 HWEWLKNAVETAD--RPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVL 176
Query: 75 SGFHD-RLNVISKDALK------TEFPQFDLVVANIPYGISSP 110
+G + I +DA+K +D+++ + P
Sbjct: 177 AGLEQAPIRWICEDAMKFIQREERRGSTYDIILTDPPKFGRGT 219
>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase
TM1293 {Thermotoga maritima [TaxId: 2336]}
Length = 208
Score = 27.0 bits (58), Expect = 1.8
Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Query: 10 QHILTNQRVLDSIVRK-SSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERM 64
+ L ++ S ++ + P+ +EIG GTG + K +E ERM
Sbjct: 15 RWFLVHRFAYLSELQAVKCLLPEGRGVEIGVGTGRFAVP----LKIKIGVEPSERM 66
>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces
salmonicolor [TaxId: 5005]}
Length = 342
Score = 26.7 bits (57), Expect = 2.9
Identities = 12/71 (16%), Positives = 23/71 (32%), Gaps = 5/71 (7%)
Query: 21 SIVRKSSINPDDTVLEIGPGTG----NLTLKLLEVSKKVHAIEIDERMVEILNRRAADSG 76
+ + + + VL G G ++ +LLE KV + L +R
Sbjct: 1 AKIDNAVLPEGSLVLVTG-ANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY 59
Query: 77 FHDRLNVISKD 87
+ +D
Sbjct: 60 PGRFETAVVED 70
>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol
dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}
Length = 171
Score = 26.0 bits (56), Expect = 3.0
Identities = 7/47 (14%), Positives = 16/47 (34%)
Query: 23 VRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILN 69
R+ + VL G G + L+ + + + + L+
Sbjct: 19 CRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLS 65
>d2hkja1 a.156.1.3 (A:229-306) Topoisomerase VI-B subunit middle
domain {Archaeon Sulfolobus shibatae [TaxId: 2286]}
Length = 78
Score = 24.8 bits (54), Expect = 3.1
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 104 PYGISSPLVAKLVYGTKSFRSATLLLQKEFAR 135
PYG+ + L+ K + L EF
Sbjct: 5 PYGVDREEIKILINNLKRDYTIKEFLVNEFQS 36
>d1wdea_ c.90.1.1 (A:) Diphthine synthase, DphB {Aeropyrum pernix
[TaxId: 56636]}
Length = 289
Score = 25.1 bits (54), Expect = 8.7
Identities = 5/22 (22%), Positives = 10/22 (45%)
Query: 37 IGPGTGNLTLKLLEVSKKVHAI 58
G G TL+ L+ ++ +
Sbjct: 10 WGYAPGMQTLEALDAVRRADVV 31
>d2nmza1 b.50.1.1 (A:1-99) Human immunodeficiency virus type 1
protease {Human immunodeficiency virus type 1 [TaxId:
11676]}
Length = 99
Score = 23.7 bits (52), Expect = 10.0
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Query: 31 DDTVLEIGPGTGNLTLKLLEVSK---KVHAIEIDERMVEILNRRA 72
DDTV+E G K++ KV + D+ ++EI +A
Sbjct: 29 DDTVIEEMSLPGRWKPKMIGGIGGFIKVR--QYDQIIIEIAGHKA 71
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.136 0.382
Gapped
Lambda K H
0.267 0.0559 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 816,185
Number of extensions: 36579
Number of successful extensions: 158
Number of sequences better than 10.0: 1
Number of HSP's gapped: 142
Number of HSP's successfully gapped: 58
Length of query: 232
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 150
Effective length of database: 1,281,736
Effective search space: 192260400
Effective search space used: 192260400
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (23.8 bits)