Citrus Sinensis ID: 047898

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-
Protein Sequence
LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNIADFNLSNQAPNMAARLHSTRVLGTFSYHAP
Secondary Structure (PSIPRED)
ccccccccEEEEEccccEEEEEEEEEccccHHHHcccccccccccHHHHHHHHHHHHHHHHHHccccccccEEEccccccccccccccccccccccEEEcccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccEEEEEEEEccccEEEEEEEcccccHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEcccHccHHHcccHEEcccccccEEEEEEEEccccccc
Coil and Loop (DISEMBL)
LKHENLVELLGYCVEGNLRDELIWIIHVITCkkgvqgaqpspvldwMTRVRIVVDALRGLEylhekvqpsiiqrdirssniadfnlsnqapnMAARLHSTRVLgtfsyhap
Flexible Loop (DISEMBL)
LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGvqgaqpspvldwmTRVRIVVDALRGLEYlhekvqpsiiqrdiRSSNIADFNLSNQAPNMAARLHSTRVLGTFSYHAP
Low Complexity Region (SEG)
LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNIADFNLSNQAPNMAARLHSTRVLGTFSYHAP
Disordered region (IsUnstruct)
*****LVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNIADFN****************VL********
Disordered Region (DISOPRED)
LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNIADFNLSNQAPNMAARLHSTRVLGTFSYHAP
Disordered Region (DISEMBL)
LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNIADFNLSNQAPNMAARLHSTRVLGTFSYHAP
Disordered Region (DISPRO)
**HENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNIADFNLSNQAPNMAARLHSTRVLGTFSYHAP
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNIADFNLSNQAPNMAARLHSTRVLGTFSYHAP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	111	2.2.26 [Sep-21-2011]
B9DFG5	408	PTI1-like tyrosine-protei	no	no	1.0	0.272	0.645	5e-41
Q8H1G6	361	PTI1-like tyrosine-protei	no	no	1.0	0.307	0.629	2e-39
O49339	366	PTI1-like tyrosine-protei	no	no	1.0	0.303	0.622	4e-39
O80719	365	Probable receptor-like pr	no	no	0.972	0.295	0.607	5e-36
Q41328	354	Pto-interacting protein 1	N/A	no	0.972	0.305	0.607	6e-36
P93749	365	Probable protein kinase A	no	no	0.990	0.301	0.554	1e-32
Q8GX23	670	Proline-rich receptor-lik	no	no	0.981	0.162	0.413	7e-17
Q9CAL8	710	Proline-rich receptor-lik	no	no	0.972	0.152	0.401	5e-16
Q9FE20	456	Serine/threonine-protein	no	no	1.0	0.243	0.368	6e-16
Q9LQQ8	423	Probable serine/threonine	no	no	0.909	0.238	0.382	7e-16

>sp|B9DFG5|PTI13_ARATH PTI1-like tyrosine-protein kinase 3 OS=Arabidopsis thaliana GN=PTI13 PE=1 SV=1

 Score =  166 bits (419), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 82/127 (64%), Positives = 93/127 (73%), Gaps = 16/127 (12%)

Query: 1   LKHENLVELLGYCVEGNLR------DELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVV 54
           LKH+N VEL GYCVEGN R        +  +  ++  +KGVQGAQP P LDW+ RVRI V
Sbjct: 165 LKHDNFVELFGYCVEGNFRILAYEFATMGSLHDILHGRKGVQGAQPGPTLDWIQRVRIAV 224

Query: 55  DALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLG 104
           DA RGLEYLHEKVQP++I RDIRSSN          IADFNLSNQ+P+MAARLHSTRVLG
Sbjct: 225 DAARGLEYLHEKVQPAVIHRDIRSSNVLLFEDFKAKIADFNLSNQSPDMAARLHSTRVLG 284

Query: 105 TFSYHAP 111
           TF YHAP
Sbjct: 285 TFGYHAP 291

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 0EC: .EC: 2

>sp|Q8H1G6|PTI11_ARATH PTI1-like tyrosine-protein kinase 1 OS=Arabidopsis thaliana GN=PTI11 PE=1 SV=1

 Score =  160 bits (405), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 80/127 (62%), Positives = 94/127 (74%), Gaps = 16/127 (12%)

Query: 1   LKHENLVELLGYCVEGNLR------DELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVV 54
           LKHENL++LLG+CV+GNLR        +  +  ++  +KGVQGAQP P LDW+TRV+I V
Sbjct: 120 LKHENLIQLLGFCVDGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPTLDWITRVKIAV 179

Query: 55  DALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLG 104
           +A RGLEYLHEK QP +I RDIRSSN          IADFNLSNQAP+ AARLHSTRVLG
Sbjct: 180 EAARGLEYLHEKSQPPVIHRDIRSSNVLLFEDYKAKIADFNLSNQAPDNAARLHSTRVLG 239

Query: 105 TFSYHAP 111
           TF YHAP
Sbjct: 240 TFGYHAP 246

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|O49339|PTI12_ARATH PTI1-like tyrosine-protein kinase 2 OS=Arabidopsis thaliana GN=PTI12 PE=1 SV=1

 Score =  159 bits (402), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 79/127 (62%), Positives = 94/127 (74%), Gaps = 16/127 (12%)

Query: 1   LKHENLVELLGYCVEGNLR------DELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVV 54
           LKHENL++L+GYCV+ NLR        +  +  ++  +KGVQGAQP P LDW+TRV+I V
Sbjct: 123 LKHENLIQLVGYCVDENLRVLAYEFATMGSLHDILHGRKGVQGAQPGPTLDWLTRVKIAV 182

Query: 55  DALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLG 104
           +A RGLEYLHEKVQP +I RDIRSSN          +ADFNLSNQAP+ AARLHSTRVLG
Sbjct: 183 EAARGLEYLHEKVQPPVIHRDIRSSNVLLFEDYQAKVADFNLSNQAPDNAARLHSTRVLG 242

Query: 105 TFSYHAP 111
           TF YHAP
Sbjct: 243 TFGYHAP 249

Probable tyrosine-protein kinase involved in oxidative burst-mediated signaling leading to specific genes expression.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|O80719|Y2706_ARATH Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1

 Score =  149 bits (376), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 79/130 (60%), Positives = 89/130 (68%), Gaps = 22/130 (16%)

Query: 1   LKHENLVELLGYCVEGNLR---------DELIWIIHVITCKKGVQGAQPSPVLDWMTRVR 51
           LKH+N V+LLGYCV+GN R           L  I+H    +KGV+GAQP PVL W  RV+
Sbjct: 123 LKHDNFVQLLGYCVDGNSRILSYEFANNGSLHDILH---GRKGVKGAQPGPVLSWYQRVK 179

Query: 52  IVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTR 101
           I V A RGLEYLHEK  P II RDI+SSN          IADF+LSNQAP+MAARLHSTR
Sbjct: 180 IAVGAARGLEYLHEKANPHIIHRDIKSSNVLLFEDDVAKIADFDLSNQAPDMAARLHSTR 239

Query: 102 VLGTFSYHAP 111
           VLGTF YHAP
Sbjct: 240 VLGTFGYHAP 249

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q41328|PTI1_SOLLC Pto-interacting protein 1 OS=Solanum lycopersicum GN=PTI1 PE=1 SV=2

 Score =  149 bits (375), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 79/130 (60%), Positives = 89/130 (68%), Gaps = 22/130 (16%)

Query: 1   LKHENLVELLGYCVEGNLR---------DELIWIIHVITCKKGVQGAQPSPVLDWMTRVR 51
           LK EN+VELLGYCV+G  R           L  I+H    +KGV+GAQP PVL W  RV+
Sbjct: 118 LKDENVVELLGYCVDGGFRVLAYEYAPNGSLHDILH---GRKGVKGAQPGPVLSWAQRVK 174

Query: 52  IVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTR 101
           I V A +GLEYLHEK QP II RDI+SSN          IADF+LSNQAP+MAARLHSTR
Sbjct: 175 IAVGAAKGLEYLHEKAQPHIIHRDIKSSNILLFDDDVAKIADFDLSNQAPDMAARLHSTR 234

Query: 102 VLGTFSYHAP 111
           VLGTF YHAP
Sbjct: 235 VLGTFGYHAP 244

A serine-threonine kinase involved in the hypersensitive response (HR)-mediated signaling cascade.

Solanum lycopersicum (taxid: 4081)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P93749|Y2197_ARATH Probable protein kinase At2g41970 OS=Arabidopsis thaliana GN=At2g41970 PE=2 SV=1

 Score =  137 bits (346), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 71/128 (55%), Positives = 88/128 (68%), Gaps = 18/128 (14%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWII-------HVITCKKGVQGAQPSPVLDWMTRVRIV 53
           LKH++ VELLGYC+E N R  LI+          V+  +KGVQGA+P PVL+W  RV+I 
Sbjct: 124 LKHDHFVELLGYCLEANNRI-LIYQFATKGSLHDVLHGRKGVQGAEPGPVLNWNQRVKIA 182

Query: 54  VDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRVL 103
             A +GLE+LHEKVQP I+ RD+RSSN+          ADFNL+N + + AARLHSTRVL
Sbjct: 183 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFVAKMADFNLTNASSDTAARLHSTRVL 242

Query: 104 GTFSYHAP 111
           GTF YHAP
Sbjct: 243 GTFGYHAP 250

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q8GX23|PERK5_ARATH Proline-rich receptor-like protein kinase PERK5 OS=Arabidopsis thaliana GN=PERK5 PE=2 SV=1

 Score = 85.9 bits (211), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 50/121 (41%), Positives = 69/121 (57%), Gaps = 12/121 (9%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGL 60
           + H +LV L+GYC+ G  R  +   I   T +  + G +  PVLDW TRV+I + + RGL
Sbjct: 363 VHHRHLVSLVGYCISGGQRLLVYEFIPNNTLEFHLHG-KGRPVLDWPTRVKIALGSARGL 421

Query: 61  EYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRVLGTFSYHA 110
            YLHE   P II RDI+++NI          ADF L+  + +    + STRV+GTF Y A
Sbjct: 422 AYLHEDCHPRIIHRDIKAANILLDFSFETKVADFGLAKLSQDNYTHV-STRVMGTFGYLA 480

Query: 111 P 111
           P
Sbjct: 481 P 481

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9CAL8|PEK13_ARATH Proline-rich receptor-like protein kinase PERK13 OS=Arabidopsis thaliana GN=PERK13 PE=2 SV=1

 Score = 82.8 bits (203), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 49/122 (40%), Positives = 69/122 (56%), Gaps = 14/122 (11%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGL 60
           + H +LV L+GYC+  + R  +   +   T +  + G +  PVL+W  RVRI + + +GL
Sbjct: 404 VHHRHLVSLVGYCIADSERLLIYEYVPNQTLEHHLHG-KGRPVLEWARRVRIAIGSAKGL 462

Query: 61  EYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLH-STRVLGTFSYH 109
            YLHE   P II RDI+S+NI          ADF L+    N + + H STRV+GTF Y 
Sbjct: 463 AYLHEDCHPKIIHRDIKSANILLDDEFEAQVADFGLAKL--NDSTQTHVSTRVMGTFGYL 520

Query: 110 AP 111
           AP
Sbjct: 521 AP 522

Regulates negatively root hairs elongation.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FE20|PBS1_ARATH Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1

 Score = 82.8 bits (203), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 45/122 (36%), Positives = 65/122 (53%), Gaps = 11/122 (9%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSP-VLDWMTRVRIVVDALRG 59
           L H NLV L+GYC +G+ R  +   + + + +  +    P    LDW  R++I   A +G
Sbjct: 138 LHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNMRMKIAAGAAKG 197

Query: 60  LEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRVLGTFSYH 109
           LE+LH+K  P +I RD +SSNI          +DF L+   P       STRV+GT+ Y 
Sbjct: 198 LEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYC 257

Query: 110 AP 111
           AP
Sbjct: 258 AP 259

Protein kinase required for plant defense mechanism mediated by the disease resistance (R) protein RPS5. In case of infection by Pseudomonas syringae, RPS5 specifically recognizes the avrPphB type III effector avirulence protein and triggers a defense reaction. AvrPphB may trigger RPS5-mediated defense mechanism via the cleavage of PBS1. Both kinase activity and cleavage by avrPphB are independently required to trigger the RPS5-mediated resistance.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LQQ8|RLCK7_ARATH Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1

 Score = 82.4 bits (202), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 49/128 (38%), Positives = 69/128 (53%), Gaps = 27/128 (21%)

Query: 3   HENLVELLGYCVEGNLR---------DELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIV 53
           H NLV+L+G+C EG+ R           L   +HV+       G +P   LDW TR++I 
Sbjct: 157 HPNLVKLIGFCAEGDQRLLVYEYMPQGSLEDHLHVLP-----SGKKP---LDWNTRMKIA 208

Query: 54  VDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRVL 103
             A RGLEYLH+++ P +I RD++ SNI          +DF L+   P+      STRV+
Sbjct: 209 AGAARGLEYLHDRMTPPVIYRDLKCSNILLGEDYQPKLSDFGLAKVGPSGDKTHVSTRVM 268

Query: 104 GTFSYHAP 111
           GT+ Y AP
Sbjct: 269 GTYGYCAP 276

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	111
297745178	401	unnamed protein product [Vitis vinifera]	1.0	0.276	0.708	3e-42
409893136	273	hypothetical protein, partial [Scutellar	1.0	0.406	0.692	6e-42
359478064	495	PREDICTED: PTI1-like tyrosine-protein ki	1.0	0.224	0.708	7e-42
224093188	368	predicted protein [Populus trichocarpa]	1.0	0.301	0.677	2e-41
449446223	366	PREDICTED: PTI1-like tyrosine-protein ki	1.0	0.303	0.685	2e-41
449499433	366	PREDICTED: LOW QUALITY PROTEIN: PTI1-lik	1.0	0.303	0.685	2e-41
449469154	471	PREDICTED: PTI1-like tyrosine-protein ki	1.0	0.235	0.692	2e-41
255579414	406	Serine/threonine-protein kinase PBS1, pu	1.0	0.273	0.677	7e-41
115441637	369	Os01g0899000 [Oryza sativa Japonica Grou	1.0	0.300	0.669	2e-40
218189537	369	hypothetical protein OsI_04798 [Oryza sa	1.0	0.300	0.669	2e-40

>gi|297745178|emb|CBI39170.3| unnamed protein product [Vitis vinifera]

 Score =  175 bits (444), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 90/127 (70%), Positives = 97/127 (76%), Gaps = 16/127 (12%)

Query: 1   LKHENLVELLGYCVEGNLR------DELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVV 54
           LKHENLVELLGYCV+GNLR        +  +  ++  +KGVQGAQP PVLDWM RVRI V
Sbjct: 162 LKHENLVELLGYCVDGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMQRVRIAV 221

Query: 55  DALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLG 104
           DA RGLEYLHEKVQPSII RDIRSSN          IADFNLSNQAP+MAARLHSTRVLG
Sbjct: 222 DAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLG 281

Query: 105 TFSYHAP 111
           TF YHAP
Sbjct: 282 TFGYHAP 288

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|409893136|gb|AFV46209.1| hypothetical protein, partial [Scutellaria baicalensis]

 Score =  174 bits (441), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 88/127 (69%), Positives = 96/127 (75%), Gaps = 16/127 (12%)

Query: 1   LKHENLVELLGYCVEGNLR------DELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVV 54
           LKH+NLVELLGYCV+GNLR        +  +  ++  +KGVQGAQP P LDWM RVRI V
Sbjct: 111 LKHDNLVELLGYCVDGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPTLDWMQRVRIAV 170

Query: 55  DALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLG 104
           DA RGLEYLHEKVQPSII RDIRSSN          IADFNLSNQAP+MAARLHSTRVLG
Sbjct: 171 DAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDYKAKIADFNLSNQAPDMAARLHSTRVLG 230

Query: 105 TFSYHAP 111
           TF YHAP
Sbjct: 231 TFGYHAP 237

Source: Scutellaria baicalensis

Species: Scutellaria baicalensis

Genus: Scutellaria

Family: Lamiaceae

Order: Lamiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359478064|ref|XP_002272354.2| PREDICTED: PTI1-like tyrosine-protein kinase 3 [Vitis vinifera]

 Score =  174 bits (441), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 90/127 (70%), Positives = 97/127 (76%), Gaps = 16/127 (12%)

Query: 1   LKHENLVELLGYCVEGNLR------DELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVV 54
           LKHENLVELLGYCV+GNLR        +  +  ++  +KGVQGAQP PVLDWM RVRI V
Sbjct: 256 LKHENLVELLGYCVDGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMQRVRIAV 315

Query: 55  DALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLG 104
           DA RGLEYLHEKVQPSII RDIRSSN          IADFNLSNQAP+MAARLHSTRVLG
Sbjct: 316 DAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLG 375

Query: 105 TFSYHAP 111
           TF YHAP
Sbjct: 376 TFGYHAP 382

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224093188|ref|XP_002309825.1| predicted protein [Populus trichocarpa] gi|222852728|gb|EEE90275.1| predicted protein [Populus trichocarpa]

 Score =  172 bits (437), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 86/127 (67%), Positives = 96/127 (75%), Gaps = 16/127 (12%)

Query: 1   LKHENLVELLGYCVEGNLR------DELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVV 54
           LKHEN VELLGYCVEGNLR        +  +  ++  +KGVQGAQP PVLDWM RVRI V
Sbjct: 123 LKHENFVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMQRVRIAV 182

Query: 55  DALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLG 104
           DA RG+EYLHEKVQP++I RD+RSSN          IADFNLSNQAP+MAARLHSTRVLG
Sbjct: 183 DAARGMEYLHEKVQPAVIHRDVRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLG 242

Query: 105 TFSYHAP 111
           TF YHAP
Sbjct: 243 TFGYHAP 249

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449446223|ref|XP_004140871.1| PREDICTED: PTI1-like tyrosine-protein kinase 3-like [Cucumis sativus]

 Score =  172 bits (437), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 87/127 (68%), Positives = 97/127 (76%), Gaps = 16/127 (12%)

Query: 1   LKHENLVELLGYCVEGNLR------DELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVV 54
           LKHENLVELLGYCVEGN+R        +  +  V+  +KGVQGAQP PVLDWM RVRI V
Sbjct: 123 LKHENLVELLGYCVEGNIRVLAYEYATMGSLHDVLHGRKGVQGAQPGPVLDWMQRVRIAV 182

Query: 55  DALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLG 104
           D+ +GLEYLHEKVQP+II RDIRSSN          +ADFNLSNQAP+MAARLHSTRVLG
Sbjct: 183 DSAKGLEYLHEKVQPAIIHRDIRSSNVLLFEDFKAKVADFNLSNQAPDMAARLHSTRVLG 242

Query: 105 TFSYHAP 111
           TF YHAP
Sbjct: 243 TFGYHAP 249

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449499433|ref|XP_004160815.1| PREDICTED: LOW QUALITY PROTEIN: PTI1-like tyrosine-protein kinase 3-like [Cucumis sativus]

 Score =  172 bits (436), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 87/127 (68%), Positives = 97/127 (76%), Gaps = 16/127 (12%)

Query: 1   LKHENLVELLGYCVEGNLR------DELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVV 54
           LKHENLVELLGYCVEGN+R        +  +  V+  +KGVQGAQP PVLDWM RVRI V
Sbjct: 123 LKHENLVELLGYCVEGNIRVLAYEYATMGSLHDVLHGRKGVQGAQPGPVLDWMQRVRIAV 182

Query: 55  DALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLG 104
           D+ +GLEYLHEKVQP+II RDIRSSN          +ADFNLSNQAP+MAARLHSTRVLG
Sbjct: 183 DSAKGLEYLHEKVQPAIIHRDIRSSNVLLFEDFKAKVADFNLSNQAPDMAARLHSTRVLG 242

Query: 105 TFSYHAP 111
           TF YHAP
Sbjct: 243 TFGYHAP 249

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449469154|ref|XP_004152286.1| PREDICTED: PTI1-like tyrosine-protein kinase 3-like [Cucumis sativus] gi|449502300|ref|XP_004161602.1| PREDICTED: PTI1-like tyrosine-protein kinase 3-like [Cucumis sativus]

 Score =  172 bits (436), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 88/127 (69%), Positives = 95/127 (74%), Gaps = 16/127 (12%)

Query: 1   LKHENLVELLGYCVEGNLR------DELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVV 54
           LKHEN VEL GYCVEGNLR        +  +  ++  +KGVQGAQP PVLDWM RVRI V
Sbjct: 230 LKHENFVELHGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMQRVRIAV 289

Query: 55  DALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLG 104
           DA RGLEYLHEKVQPSII RD+RSSN          IADFNLSNQAP+MAARLHSTRVLG
Sbjct: 290 DAARGLEYLHEKVQPSIIHRDVRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLG 349

Query: 105 TFSYHAP 111
           TF YHAP
Sbjct: 350 TFGYHAP 356

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255579414|ref|XP_002530551.1| Serine/threonine-protein kinase PBS1, putative [Ricinus communis] gi|223529913|gb|EEF31842.1| Serine/threonine-protein kinase PBS1, putative [Ricinus communis]

 Score =  171 bits (432), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 86/127 (67%), Positives = 96/127 (75%), Gaps = 16/127 (12%)

Query: 1   LKHENLVELLGYCVEGNLR------DELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVV 54
           LKH+N+VELLGYCVEGNLR        +  +  ++  +KGVQGAQP P LDWM RV+I V
Sbjct: 162 LKHDNVVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPTLDWMQRVKIAV 221

Query: 55  DALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLG 104
           DA RGLEYLHEKVQP+II RDIRSSN          IADFNLSNQAP+MAARLHSTRVLG
Sbjct: 222 DAARGLEYLHEKVQPAIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLG 281

Query: 105 TFSYHAP 111
           TF YHAP
Sbjct: 282 TFGYHAP 288

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115441637|ref|NP_001045098.1| Os01g0899000 [Oryza sativa Japonica Group] gi|56784334|dbj|BAD82355.1| putative protein kinase Pti1 [Oryza sativa Japonica Group] gi|113534629|dbj|BAF07012.1| Os01g0899000 [Oryza sativa Japonica Group] gi|215768457|dbj|BAH00686.1| unnamed protein product [Oryza sativa Japonica Group] gi|222619687|gb|EEE55819.1| hypothetical protein OsJ_04421 [Oryza sativa Japonica Group]

 Score =  169 bits (428), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 85/127 (66%), Positives = 94/127 (74%), Gaps = 16/127 (12%)

Query: 1   LKHENLVELLGYCVEGNLR------DELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVV 54
           LKHEN V++LGYC EGNLR        +  +  V+  +KGVQGAQP P LDWM RVRI V
Sbjct: 124 LKHENFVDMLGYCTEGNLRLVAYEFATMGSLHDVLHGRKGVQGAQPGPALDWMQRVRIAV 183

Query: 55  DALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRVLG 104
           DA +GLEYLHEKVQPSI+ RDIRSSNI          ADFNLSNQAP+MAARLHSTRVLG
Sbjct: 184 DAAKGLEYLHEKVQPSIVHRDIRSSNILLFEDFKAKVADFNLSNQAPDMAARLHSTRVLG 243

Query: 105 TFSYHAP 111
           TF YHAP
Sbjct: 244 TFGYHAP 250

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|218189537|gb|EEC71964.1| hypothetical protein OsI_04798 [Oryza sativa Indica Group]

 Score =  169 bits (428), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 85/127 (66%), Positives = 94/127 (74%), Gaps = 16/127 (12%)

Query: 1   LKHENLVELLGYCVEGNLR------DELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVV 54
           LKHEN V++LGYC EGNLR        +  +  V+  +KGVQGAQP P LDWM RVRI V
Sbjct: 124 LKHENFVDMLGYCTEGNLRLVAYEFATMGSLHDVLHGRKGVQGAQPGPALDWMQRVRIAV 183

Query: 55  DALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRVLG 104
           DA +GLEYLHEKVQPSI+ RDIRSSNI          ADFNLSNQAP+MAARLHSTRVLG
Sbjct: 184 DAAKGLEYLHEKVQPSIVHRDIRSSNILLFEDFKAKVADFNLSNQAPDMAARLHSTRVLG 243

Query: 105 TFSYHAP 111
           TF YHAP
Sbjct: 244 TFGYHAP 250

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	111
TAIR|locus:2081277	408	AT3G59350 [Arabidopsis thalian	1.0	0.272	0.661	1e-36
TAIR|locus:2009115	361	AT1G06700 [Arabidopsis thalian	1.0	0.307	0.645	9.2e-36
TAIR|locus:2054502	366	AT2G30740 [Arabidopsis thalian	1.0	0.303	0.637	1.2e-35
TAIR|locus:2054492	338	AT2G30730 [Arabidopsis thalian	1.0	0.328	0.590	9.8e-32
TAIR|locus:2088990	364	AT3G17410 [Arabidopsis thalian	0.990	0.302	0.593	5.4e-31
TAIR|locus:2098083	361	AT3G62220 [Arabidopsis thalian	1.0	0.307	0.582	1.4e-30
TAIR|locus:2064557	365	AT2G41970 [Arabidopsis thalian	0.990	0.301	0.562	1.3e-29
TAIR|locus:2023767	363	AT1G48210 [Arabidopsis thalian	1.0	0.305	0.551	3.1e-28
TAIR|locus:2023752	364	AT1G48220 [Arabidopsis thalian	1.0	0.304	0.468	3e-21
TAIR|locus:2139474	670	PERK5 "proline-rich extensin-l	0.972	0.161	0.432	2.1e-15

TAIR|locus:2081277 AT3G59350 [Arabidopsis thaliana (taxid:3702)]

 Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
 Identities = 84/127 (66%), Positives = 95/127 (74%)

Query:     1 LKHENLVELLGYCVEGNLRD---ELIWI--IH-VITCKKGVQGAQPSPVLDWMTRVRIVV 54
             LKH+N VEL GYCVEGN R    E   +  +H ++  +KGVQGAQP P LDW+ RVRI V
Sbjct:   165 LKHDNFVELFGYCVEGNFRILAYEFATMGSLHDILHGRKGVQGAQPGPTLDWIQRVRIAV 224

Query:    55 DALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLG 104
             DA RGLEYLHEKVQP++I RDIRSSN          IADFNLSNQ+P+MAARLHSTRVLG
Sbjct:   225 DAARGLEYLHEKVQPAVIHRDIRSSNVLLFEDFKAKIADFNLSNQSPDMAARLHSTRVLG 284

Query:   105 TFSYHAP 111
             TF YHAP
Sbjct:   285 TFGYHAP 291

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IPI

GO:0005886 "plasma membrane" evidence=IDA

GO:0010200 "response to chitin" evidence=RCA

TAIR|locus:2009115 AT1G06700 [Arabidopsis thaliana (taxid:3702)]

 Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
 Identities = 82/127 (64%), Positives = 96/127 (75%)

Query:     1 LKHENLVELLGYCVEGNLRD---ELIWI--IH-VITCKKGVQGAQPSPVLDWMTRVRIVV 54
             LKHENL++LLG+CV+GNLR    E   +  +H ++  +KGVQGAQP P LDW+TRV+I V
Sbjct:   120 LKHENLIQLLGFCVDGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPTLDWITRVKIAV 179

Query:    55 DALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLG 104
             +A RGLEYLHEK QP +I RDIRSSN          IADFNLSNQAP+ AARLHSTRVLG
Sbjct:   180 EAARGLEYLHEKSQPPVIHRDIRSSNVLLFEDYKAKIADFNLSNQAPDNAARLHSTRVLG 239

Query:   105 TFSYHAP 111
             TF YHAP
Sbjct:   240 TFGYHAP 246

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IPI

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2054502 AT2G30740 [Arabidopsis thaliana (taxid:3702)]

 Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
 Identities = 81/127 (63%), Positives = 96/127 (75%)

Query:     1 LKHENLVELLGYCVEGNLRD---ELIWI--IH-VITCKKGVQGAQPSPVLDWMTRVRIVV 54
             LKHENL++L+GYCV+ NLR    E   +  +H ++  +KGVQGAQP P LDW+TRV+I V
Sbjct:   123 LKHENLIQLVGYCVDENLRVLAYEFATMGSLHDILHGRKGVQGAQPGPTLDWLTRVKIAV 182

Query:    55 DALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRVLG 104
             +A RGLEYLHEKVQP +I RDIRSSN+          ADFNLSNQAP+ AARLHSTRVLG
Sbjct:   183 EAARGLEYLHEKVQPPVIHRDIRSSNVLLFEDYQAKVADFNLSNQAPDNAARLHSTRVLG 242

Query:   105 TFSYHAP 111
             TF YHAP
Sbjct:   243 TFGYHAP 249

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2054492 AT2G30730 [Arabidopsis thaliana (taxid:3702)]

 Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
 Identities = 75/127 (59%), Positives = 93/127 (73%)

Query:     1 LKHENLVELLGYCVEGNLRD---ELIWI--IH-VITCKKGVQGAQPSPVLDWMTRVRIVV 54
             LKHENL++L+GYCV+ NLR    E   +  +H ++  +KGVQ A P P LDW+TRV+I V
Sbjct:    99 LKHENLIQLVGYCVDENLRVLAYEFATMGSLHDILHGRKGVQDALPGPTLDWITRVKIAV 158

Query:    55 DALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRVLG 104
             +A RGLEYLHEKVQP +I RDIRSSNI          ADFNLSNQ+P+ AARL STRVLG
Sbjct:   159 EAARGLEYLHEKVQPQVIHRDIRSSNILLFDDYQAKIADFNLSNQSPDNAARLQSTRVLG 218

Query:   105 TFSYHAP 111
             +F Y++P
Sbjct:   219 SFGYYSP 225

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2088990 AT3G17410 [Arabidopsis thaliana (taxid:3702)]

 Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
 Identities = 76/128 (59%), Positives = 90/128 (70%)

Query:     1 LKHENLVELLGYCVEGNLRDELIW------IIH-VITCKKGVQGAQPSPVLDWMTRVRIV 53
             L+ EN+V LLGYCV+G LR  L +       +H ++  +KGV+GAQP PVL W  RV+I 
Sbjct:   119 LRQENVVALLGYCVDGPLR-VLAYEYAPNGSLHDILHGRKGVKGAQPGPVLSWHQRVKIA 177

Query:    54 VDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVL 103
             V A RGLEYLHEK  P +I RDI+SSN          IADF+LSNQAP+MAARLHSTRVL
Sbjct:   178 VGAARGLEYLHEKANPHVIHRDIKSSNVLLFDDDVAKIADFDLSNQAPDMAARLHSTRVL 237

Query:   104 GTFSYHAP 111
             GTF YHAP
Sbjct:   238 GTFGYHAP 245

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006499 "N-terminal protein myristoylation" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042631 "cellular response to water deprivation" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

TAIR|locus:2098083 AT3G62220 [Arabidopsis thaliana (taxid:3702)]

 Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
 Identities = 74/127 (58%), Positives = 88/127 (69%)

Query:     1 LKHENLVELLGYCVEGNLRDELIWI-----IH-VITCKKGVQGAQPSPVLDWMTRVRIVV 54
             LKH N VELLGY V+GN R  +        +H ++  +KGV+GA+P P+L W  RV+I V
Sbjct:   119 LKHVNFVELLGYSVDGNSRILVFEFAQNGSLHDILHGRKGVKGAKPGPLLSWHQRVKIAV 178

Query:    55 DALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLG 104
              A RGLEYLHEK  P +I RDI+SSN          IADF+LSNQAP+MAARLHSTRVLG
Sbjct:   179 GAARGLEYLHEKANPHVIHRDIKSSNVLIFDNDVAKIADFDLSNQAPDMAARLHSTRVLG 238

Query:   105 TFSYHAP 111
             TF YHAP
Sbjct:   239 TFGYHAP 245

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2064557 AT2G41970 [Arabidopsis thaliana (taxid:3702)]

 Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
 Identities = 72/128 (56%), Positives = 90/128 (70%)

Query:     1 LKHENLVELLGYCVEGNLRDELIW------IIH-VITCKKGVQGAQPSPVLDWMTRVRIV 53
             LKH++ VELLGYC+E N R  LI+       +H V+  +KGVQGA+P PVL+W  RV+I 
Sbjct:   124 LKHDHFVELLGYCLEANNRI-LIYQFATKGSLHDVLHGRKGVQGAEPGPVLNWNQRVKIA 182

Query:    54 VDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRVL 103
               A +GLE+LHEKVQP I+ RD+RSSN+          ADFNL+N + + AARLHSTRVL
Sbjct:   183 YGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFVAKMADFNLTNASSDTAARLHSTRVL 242

Query:   104 GTFSYHAP 111
             GTF YHAP
Sbjct:   243 GTFGYHAP 250

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

TAIR|locus:2023767 AT1G48210 [Arabidopsis thaliana (taxid:3702)]

 Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
 Identities = 70/127 (55%), Positives = 85/127 (66%)

Query:     1 LKHENLVELLGYCVEGNLRD---ELI--WIIH-VITCKKGVQGAQPSPVLDWMTRVRIVV 54
             L+H+N+  L+GYCV+G LR    E      +H  +  KKG +GA   PV+ W  RV+I V
Sbjct:   118 LRHDNVTALMGYCVDGPLRVLAYEFAPKGSLHDTLHGKKGAKGALRGPVMTWQQRVKIAV 177

Query:    55 DALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLG 104
              A RGLEYLHEKV P +I RDI+SSN          I DF+LS+QAP+MAARLHSTRVLG
Sbjct:   178 GAARGLEYLHEKVSPQVIHRDIKSSNVLLFDDDVAKIGDFDLSDQAPDMAARLHSTRVLG 237

Query:   105 TFSYHAP 111
             TF YHAP
Sbjct:   238 TFGYHAP 244

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2023752 AT1G48220 [Arabidopsis thaliana (taxid:3702)]

 Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
 Identities = 60/128 (46%), Positives = 76/128 (59%)

Query:     1 LKHENLVELLGYCVEGNLRD-----ELIWIIH-VITCKKGVQGAQPSPVLDWMTRVRIVV 54
             L HEN+V L+ YCV+G LR           +H V+  + GV GA   PV+ W  RV+I +
Sbjct:   118 LHHENVVALMAYCVDGPLRVLAYEFATYGTLHDVLHGQTGVIGALQGPVMTWQRRVKIAL 177

Query:    55 DALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRV-L 103
              A RGLEYLH+KV P +I RDI++SNI           DF+L +QAPNMA RLHS R+ L
Sbjct:   178 GAARGLEYLHKKVNPQVIHRDIKASNILLFDDDIAKIGDFDLYDQAPNMAGRLHSCRMAL 237

Query:   104 GTFSYHAP 111
             G    H P
Sbjct:   238 GASRSHCP 245

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2139474 PERK5 "proline-rich extensin-like receptor kinase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 204 (76.9 bits), Expect = 2.1e-15, P = 2.1e-15
 Identities = 51/118 (43%), Positives = 69/118 (58%)

Query:     3 HENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEY 62
             H +LV L+GYC+ G  R  +   I   T +  + G +  PVLDW TRV+I + + RGL Y
Sbjct:   365 HRHLVSLVGYCISGGQRLLVYEFIPNNTLEFHLHG-KGRPVLDWPTRVKIALGSARGLAY 423

Query:    63 LHEKVQPSIIQRDIRSSNIA-DFNLSNQAPNMA-ARL------H-STRVLGTFSYHAP 111
             LHE   P II RDI+++NI  DF+   +  +   A+L      H STRV+GTF Y AP
Sbjct:   424 LHEDCHPRIIHRDIKAANILLDFSFETKVADFGLAKLSQDNYTHVSTRVMGTFGYLAP 481

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

GO:0048610 "cellular process involved in reproduction" evidence=RCA

GO:0048868 "pollen tube development" evidence=RCA

GO:0051510 "regulation of unidimensional cell growth" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	111
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-14
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	2e-09
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	8e-09
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-08
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-08
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	7e-08
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	4e-07
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	2e-06
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	2e-06
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	2e-06
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	3e-06
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	3e-06
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-05
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	1e-05
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	4e-05
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	5e-05
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	7e-05
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	8e-05
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	1e-04
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	1e-04
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	2e-04
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	2e-04
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	2e-04
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	3e-04
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	4e-04
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	5e-04
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	5e-04
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	5e-04
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	7e-04
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	0.001
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	0.001
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	0.001
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	0.001
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	0.001
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	0.002
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	0.002
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	0.002
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	0.002
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	0.002
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	0.002
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	0.003

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 65.3 bits (160), Expect = 2e-14
 Identities = 39/135 (28%), Positives = 53/135 (39%), Gaps = 44/135 (32%)

Query: 1   LKHENLVELLG-------------YCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWM 47
           L H N+V+L G             YC  G+L+D L                +    L   
Sbjct: 48  LNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLK---------------ENEGKLSED 92

Query: 48  TRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI-----------ADFNLSNQAPNMAAR 96
             +RI++  L GLEYLH      II RD++  NI           ADF LS    +  + 
Sbjct: 93  EILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSL 149

Query: 97  LHSTRVLGTFSYHAP 111
           L +    GT +Y AP
Sbjct: 150 LKTIV--GTPAYMAP 162

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 52.5 bits (127), Expect = 2e-09
 Identities = 27/110 (24%), Positives = 41/110 (37%), Gaps = 33/110 (30%)

Query: 1   LKHENLVELLGYCVE-------------GNLRDELIWIIHVITCKKGVQGAQPSPVLDWM 47
           L H N+V LLG C E             G+L D      ++   +  V  +     L   
Sbjct: 53  LGHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLD------YLRKSRP-VFPSPEKSTLSLK 105

Query: 48  TRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLS 87
             +   +   +G+EYL  K     + RD+ + N          I+DF LS
Sbjct: 106 DLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLS 152

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 51.0 bits (123), Expect = 8e-09
 Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 25/102 (24%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKG-----VQGAQPSPVLDWMTRVRIVVD 55
           L H N+V+LLG C E    +E ++I+ +   + G     ++  +  P L     +   + 
Sbjct: 58  LDHPNVVKLLGVCTE----EEPLYIV-MEYMEGGDLLSYLR--KNRPKLSLSDLLSFALQ 110

Query: 56  ALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLS 87
             RG+EYL  K   + I RD+ + N          I+DF LS
Sbjct: 111 IARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLS 149

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 49.6 bits (119), Expect = 2e-08
 Identities = 39/134 (29%), Positives = 52/134 (38%), Gaps = 44/134 (32%)

Query: 1   LKHENLVELLG-------------YCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWM 47
           L H N+V L+              YC  G+L D L         + G         L   
Sbjct: 55  LSHPNIVRLIDAFEDKDHLYLVMEYCEGGDLFDYLS--------RGGP--------LSED 98

Query: 48  TRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARL 97
              +I +  LRGLEYLH      II RD++  NI          ADF L+ +    ++  
Sbjct: 99  EAKKIALQILRGLEYLHSN---GIIHRDLKPENILLDENGVVKIADFGLAKKL-LKSSSS 154

Query: 98  HSTRVLGTFSYHAP 111
            +T V GT  Y AP
Sbjct: 155 LTTFV-GTPWYMAP 167

Length = 260

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 49.5 bits (119), Expect = 2e-08
 Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 24/102 (23%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKG-----VQGAQPSPVLDWMTRVRIVVD 55
           L H N+V+LLG C E    +E + I+ +     G     ++  +P   L     +   + 
Sbjct: 58  LDHPNIVKLLGVCTE----EEPLMIV-MEYMPGGDLLDYLRKNRP-KELSLSDLLSFALQ 111

Query: 56  ALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLS 87
             RG+EYL  K   + I RD+ + N          I+DF LS
Sbjct: 112 IARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLS 150

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 48.3 bits (116), Expect = 7e-08
 Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 29/104 (27%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVIT--CKKG-----VQGAQPSPVLDWMTRVRIV 53
           L H N+V LLG C +G    E ++I   +T     G     ++  +    L     +++ 
Sbjct: 58  LSHPNIVRLLGVCTQG----EPLYI---VTEYMPGGDLLDFLR--KHGEKLTLKDLLQMA 108

Query: 54  VDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLS 87
           +   +G+EYL  K   + + RD+ + N          I+DF LS
Sbjct: 109 LQIAKGMEYLESK---NFVHRDLAARNCLVTENLVVKISDFGLS 149

Length = 258

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 46.1 bits (110), Expect = 4e-07
 Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 44/134 (32%)

Query: 1   LKHENLVELLG-------------YCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWM 47
           LKH N+V+ +G             Y   G+LR     II     K G      S V  ++
Sbjct: 56  LKHPNIVKYIGSIETSDSLYIILEYAENGSLRQ----IIK----KFG--PFPESLVAVYV 105

Query: 48  TRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARL 97
            +V      L+GL YLHE+    +I RDI+++NI          ADF ++ +  +++   
Sbjct: 106 YQV------LQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDD 156

Query: 98  HSTRVLGTFSYHAP 111
            S  V+GT  + AP
Sbjct: 157 AS--VVGTPYWMAP 168

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 44.2 bits (105), Expect = 2e-06
 Identities = 37/90 (41%), Positives = 45/90 (50%), Gaps = 21/90 (23%)

Query: 32  KKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI---------- 81
            K VQG  P  +L      +I V  L+GL YLHEK +  II RD++ SNI          
Sbjct: 90  LKEVQGRIPERILG-----KIAVAVLKGLTYLHEKHK--IIHRDVKPSNILVNSRGQIKL 142

Query: 82  ADFNLSNQAPNMAARLHSTRVLGTFSYHAP 111
            DF +S Q  N  A+   T V GT SY AP
Sbjct: 143 CDFGVSGQLVNSLAK---TFV-GTSSYMAP 168

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 44.1 bits (105), Expect = 2e-06
 Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 16/67 (23%)

Query: 55  DALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRVLG 104
           + L+GLEYLH      II RDI+++NI           DF LS Q   ++       ++G
Sbjct: 106 ELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQ---LSDTKARNTMVG 159

Query: 105 TFSYHAP 111
           T  + AP
Sbjct: 160 TPYWMAP 166

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 44.1 bits (105), Expect = 2e-06
 Identities = 36/137 (26%), Positives = 49/137 (35%), Gaps = 46/137 (33%)

Query: 1   LKHENLVELLG---------------YCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLD 45
           L+H N+V   G               Y   G+L   L         KK   G  P PV  
Sbjct: 56  LQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLL---------KKF--GKLPEPV-- 102

Query: 46  WMTRVRIVV-DALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMA 94
               +R      L GL YLH      I+ RDI+ +NI          ADF  + +  ++ 
Sbjct: 103 ----IRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIE 155

Query: 95  ARLHSTRVLGTFSYHAP 111
               +  V GT  + AP
Sbjct: 156 TGEGTGSVRGTPYWMAP 172

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 43.9 bits (104), Expect = 3e-06
 Identities = 37/138 (26%), Positives = 47/138 (34%), Gaps = 48/138 (34%)

Query: 1   LKHENLVELLG-------------YCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWM 47
           LKH NLV+  G             YC  G L +           + G        +LD  
Sbjct: 56  LKHPNLVKYYGVEVHREKVYIFMEYCSGGTLEE---------LLEHG-------RILDEH 99

Query: 48  TRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFN----LSNQAPNM 93
                 +  L GL YLH      I+ RDI+ +NI           DF     L N    M
Sbjct: 100 VIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTM 156

Query: 94  AARLHSTRVLGTFSYHAP 111
              + S    GT +Y AP
Sbjct: 157 GEEVQSLA--GTPAYMAP 172

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 43.8 bits (104), Expect = 3e-06
 Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 30/121 (24%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGL 60
            K+ +L  ++ YC  G++ D ++ I       K +   + + +L            L+GL
Sbjct: 68  FKNTDLWIVMEYCGAGSVSD-IMKI-----TNKTLTEEEIAAIL---------YQTLKGL 112

Query: 61  EYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRVLGTFSYHA 110
           EYLH       I RDI++ NI          ADF +S Q  +  A+ ++  V+GT  + A
Sbjct: 113 EYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNT--VIGTPFWMA 167

Query: 111 P 111
           P
Sbjct: 168 P 168

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 37/134 (27%), Positives = 46/134 (34%), Gaps = 45/134 (33%)

Query: 1   LKHENLVELLG-------------YCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWM 47
           LKH N+V L               YC  G+L D L                +    L   
Sbjct: 54  LKHPNIVRLYDVFEDEDKLYLVMEYCEGGDLFDLL----------------KKRGRLSED 97

Query: 48  TRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARL 97
                +   L  LEYLH K    I+ RD++  NI          ADF L+ Q        
Sbjct: 98  EARFYLRQILSALEYLHSK---GIVHRDLKPENILLDEDGHVKLADFGLARQLDP--GEK 152

Query: 98  HSTRVLGTFSYHAP 111
            +T V GT  Y AP
Sbjct: 153 LTTFV-GTPEYMAP 165

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 42.0 bits (99), Expect = 1e-05
 Identities = 26/71 (36%), Positives = 32/71 (45%), Gaps = 17/71 (23%)

Query: 51  RIVVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHST 100
           +I    L+GL YLH +    II RDI+ SNI           DF +S +  N  A    T
Sbjct: 109 KIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLA---GT 162

Query: 101 RVLGTFSYHAP 111
              GT  Y AP
Sbjct: 163 FT-GTSFYMAP 172

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 40.4 bits (95), Expect = 4e-05
 Identities = 37/133 (27%), Positives = 53/133 (39%), Gaps = 43/133 (32%)

Query: 2   KHENLVELLG-------------YCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMT 48
           +H N+V   G             YC  G+L+D    I  V       +G      + ++ 
Sbjct: 58  RHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQD----IYQVT------RGPLSELQIAYVC 107

Query: 49  RVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLH 98
           R     + L+GL YLHE      I RDI+ +NI          ADF +S Q     A+  
Sbjct: 108 R-----ETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRK 159

Query: 99  STRVLGTFSYHAP 111
           S   +GT  + AP
Sbjct: 160 S--FIGTPYWMAP 170

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 40.3 bits (95), Expect = 5e-05
 Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 19/82 (23%)

Query: 40  PSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQ 89
           P PVL ++ R       L+GL+YLH K    II RDI+ SN          IADF +S  
Sbjct: 97  PEPVLAYIAR-----QILKGLDYLHTKRH--IIHRDIKPSNLLINSKGEVKIADFGISKV 149

Query: 90  APNMAARLHSTRVLGTFSYHAP 111
             N   +  +T V GT +Y +P
Sbjct: 150 LENTLDQ-CNTFV-GTVTYMSP 169

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 39.7 bits (93), Expect = 7e-05
 Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 40/113 (35%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVIT--CKKGVQGAQPSPVLDWM-TRVRIVV--- 54
           L+H NLV+LLG  ++GN        ++++T    KG        ++D++ +R R V+   
Sbjct: 57  LRHPNLVQLLGVVLQGN-------PLYIVTEYMAKGS-------LVDYLRSRGRAVITLA 102

Query: 55  -------DALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQA 90
                  D   G+EYL EK   + + RD+ + N+          +DF L+ +A
Sbjct: 103 QQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEA 152

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 39.7 bits (93), Expect = 8e-05
 Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 16/71 (22%)

Query: 51  RIVVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHST 100
           +I +  LRGL YL EK +  I+ RD++ SNI           DF +S Q  +  A     
Sbjct: 103 KISIAVLRGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----N 156

Query: 101 RVLGTFSYHAP 111
             +GT SY +P
Sbjct: 157 SFVGTRSYMSP 167

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 39.3 bits (92), Expect = 1e-04
 Identities = 39/128 (30%), Positives = 58/128 (45%), Gaps = 30/128 (23%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTR------VR-IV 53
           L+H N+VEL    V G   D +  ++    C++ +     + +LD M        V+ ++
Sbjct: 63  LRHPNIVELK-EVVVGKHLDSIFLVMEY--CEQDL-----ASLLDNMPTPFSESQVKCLM 114

Query: 54  VDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVL 103
           +  LRGL+YLHE     II RD++ SN          IADF L+      A     T  +
Sbjct: 115 LQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAK--PMTPKV 169

Query: 104 GTFSYHAP 111
            T  Y AP
Sbjct: 170 VTLWYRAP 177

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 39.0 bits (92), Expect = 1e-04
 Identities = 34/142 (23%), Positives = 53/142 (37%), Gaps = 56/142 (39%)

Query: 1   LKHENLVEL-------------LGYCVEGNLRDELIWIIHVITCKKGVQGAQPSP---VL 44
           L H N+++              + Y   G+L  ++         KK  +  +P P   +L
Sbjct: 56  LNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKI---------KKQKKEGKPFPEEQIL 106

Query: 45  DWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMA 94
           DW  ++         L+YLH +    I+ RDI+  NI           DF +S       
Sbjct: 107 DWFVQL------CLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKV----- 152

Query: 95  ARLHSTR-----VLGTFSYHAP 111
             L ST      V+GT  Y +P
Sbjct: 153 --LSSTVDLAKTVVGTPYYLSP 172

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 14/65 (21%)

Query: 57  LRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRVLGTF 106
           L GL+YLH      I+ RDI+ SNI          ADF L+       +  ++ RV+ T 
Sbjct: 110 LEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVI-TL 165

Query: 107 SYHAP 111
            Y  P
Sbjct: 166 WYRPP 170

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 38.5 bits (90), Expect = 2e-04
 Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 16/63 (25%)

Query: 59  GLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRVLGTFSY 108
            LEYLH K    II RDI+  NI           DFN++ +         +T   GT  Y
Sbjct: 112 ALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVT---PDTLTTSTSGTPGY 165

Query: 109 HAP 111
            AP
Sbjct: 166 MAP 168

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 38.6 bits (90), Expect = 2e-04
 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 20/82 (24%)

Query: 40  PSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQ 89
           P  +L      +I V  ++ LEYLH K+  S+I RD++ SN+           DF +S  
Sbjct: 101 PEDILG-----KIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGY 153

Query: 90  APNMAARLHSTRVLGTFSYHAP 111
             +  A+   T   G   Y AP
Sbjct: 154 LVDSVAK---TIDAGCKPYMAP 172

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 38.0 bits (89), Expect = 3e-04
 Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 15/70 (21%)

Query: 52  IVVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTR 101
           I+ + L GLEYLHE+     I RDI+++NI          ADF +S Q  +  ++ ++  
Sbjct: 103 ILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTF- 158

Query: 102 VLGTFSYHAP 111
            +GT  + AP
Sbjct: 159 -VGTPFWMAP 167

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 37.6 bits (88), Expect = 4e-04
 Identities = 32/137 (23%), Positives = 50/137 (36%), Gaps = 37/137 (27%)

Query: 1   LKHENLVELLGYCVEGNLRD----------ELIWIIHVITCKKGVQGAQPSPVLDWMTRV 50
           LKHEN+V L+   +E   +           +L  II      K V       +   M + 
Sbjct: 59  LKHENVVSLVEVFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVS------IPPSMVK- 111

Query: 51  RIVVDALRGLEYLHEKVQPSIIQRDIRSSN--------------IADFNLSN--QAPNMA 94
            ++   L G+ YLH      ++ RD++ +N              I D  L+    AP + 
Sbjct: 112 SLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAP-LK 167

Query: 95  ARLHSTRVLGTFSYHAP 111
                  V+ T  Y AP
Sbjct: 168 PLADLDPVVVTIWYRAP 184

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 37.4 bits (87), Expect = 5e-04
 Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 26/104 (25%)

Query: 1   LKHENLVELLGYCVEG-NLRDELIWI----IHVITCKKGVQGAQPSPVLDWMTRVRIVVD 55
           L+H N+V+ LG   E  NL   L  +    +  +  K    G+ P PV+   TR      
Sbjct: 59  LQHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKK---YGSFPEPVIRLYTR-----Q 110

Query: 56  ALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQ 89
            L GLEYLH++   + + RDI+ +NI          ADF ++ Q
Sbjct: 111 ILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQ 151

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 37.2 bits (86), Expect = 5e-04
 Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 10/83 (12%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQ--GAQPSPVLDWMTRVRIVVDALR 58
           LKH N+V+ LG C++ N     +  +   +    +   G  P PV    T+       L 
Sbjct: 59  LKHVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTK-----QILD 113

Query: 59  GLEYLHEKVQPSIIQRDIRSSNI 81
           G+ YLH      ++ RDI+ +N+
Sbjct: 114 GVAYLHNN---CVVHRDIKGNNV 133

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 37.3 bits (87), Expect = 5e-04
 Identities = 33/125 (26%), Positives = 53/125 (42%), Gaps = 23/125 (18%)

Query: 3   HENLVELLGYCVEGNLRDELIWIIHVI----TCKKGVQGAQPSPVLDWMTRVRIVVDALR 58
           H N+V+     V G    + +W++       +    ++ + P   LD      ++ + L+
Sbjct: 58  HPNVVKYYTSFVVG----DELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLK 113

Query: 59  GLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTR--VLGTF 106
           GLEYLH   Q   I RDI++ NI          ADF +S    +   R    R   +GT 
Sbjct: 114 GLEYLHSNGQ---IHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTP 170

Query: 107 SYHAP 111
            + AP
Sbjct: 171 CWMAP 175

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 37.0 bits (85), Expect = 7e-04
 Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 22/97 (22%)

Query: 31  CKKGVQGAQPSPVLDWMTRV------RIVVDALRGLEYLHEKVQPSIIQRDIRSSNI--- 81
           C + + G     VL    R+      ++ +  LRGL YL EK Q  I+ RD++ SNI   
Sbjct: 81  CMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVN 138

Query: 82  -------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP 111
                   DF +S Q  +  A       +GT SY +P
Sbjct: 139 SRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMSP 171

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 36.6 bits (85), Expect = 0.001
 Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 15/70 (21%)

Query: 52  IVVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTR 101
           I V  ++ L YL E+++  II RD++ SNI           DF +S Q  +  A+   TR
Sbjct: 112 IAVATVKALNYLKEELK--IIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAK---TR 166

Query: 102 VLGTFSYHAP 111
             G   Y AP
Sbjct: 167 DAGCRPYMAP 176

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 36.3 bits (84), Expect = 0.001
 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 17/71 (23%)

Query: 51  RIVVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHST 100
           RI +  LRGL+ LHE+    I+ RD++S+NI           D  +S       A+    
Sbjct: 107 RIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAK---- 159

Query: 101 RVLGTFSYHAP 111
             +GT  Y AP
Sbjct: 160 TQIGTPHYMAP 170

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 36.3 bits (84), Expect = 0.001
 Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 16/121 (13%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGL 60
           L H N+V+ LG+  E       I++ +V     G          + + R       L GL
Sbjct: 65  LDHLNIVQYLGF--ETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVR-FFTEQVLEGL 121

Query: 61  EYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHA 110
            YLH K    I+ RD+++ N          I+DF +S ++ ++     +  + G+  + A
Sbjct: 122 AYLHSK---GILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMA 178

Query: 111 P 111
           P
Sbjct: 179 P 179

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 36.0 bits (84), Expect = 0.001
 Identities = 36/137 (26%), Positives = 55/137 (40%), Gaps = 49/137 (35%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIH----------VIT-CKKGVQGAQPSPVLDWMTR 49
            KH N+V+         L  + +W++           +IT     +   Q +        
Sbjct: 72  CKHPNIVDYYD-SY---LVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIA-------- 119

Query: 50  VRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARL-- 97
             +  + L+GLEYLH +   ++I RDI+S NI          ADF         AA+L  
Sbjct: 120 -YVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGF-------AAQLTK 168

Query: 98  -HSTR--VLGTFSYHAP 111
             S R  V+GT  + AP
Sbjct: 169 EKSKRNSVVGTPYWMAP 185

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 36.2 bits (84), Expect = 0.001
 Identities = 30/109 (27%), Positives = 38/109 (34%), Gaps = 26/109 (23%)

Query: 2   KHENLVELLG-------------YCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMT 48
           KH+N++ LLG             Y   GNLRD L                 P   L    
Sbjct: 74  KHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKD 133

Query: 49  RVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLS 87
            V       RG+E+L  K     I RD+ + N          IADF L+
Sbjct: 134 LVSFAYQVARGMEFLASK---KCIHRDLAARNVLVTEDHVMKIADFGLA 179

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 36.2 bits (83), Expect = 0.002
 Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 17/105 (16%)

Query: 18  LRDELIWII-HVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDI 76
           L+D  +WII   +     +   +P P LD      I+ + L+GL+YLH + +   I RDI
Sbjct: 72  LKDTKLWIIMEYLGGGSALDLLEPGP-LDETQIATILREILKGLDYLHSEKK---IHRDI 127

Query: 77  RSSNI----------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP 111
           +++N+          ADF ++ Q  +   ++     +GT  + AP
Sbjct: 128 KAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNTFVGTPFWMAP 170

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 36.0 bits (83), Expect = 0.002
 Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 32/131 (24%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWM-----TRVR-IVV 54
           L+HEN+V+ LG  ++ +         H+    + V G   + +L+       T VR  V 
Sbjct: 63  LQHENIVQYLGSSLDAD---------HLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVR 113

Query: 55  DALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAP----NMAARLHST 100
             L+GL YLH +    II RDI+ +N          I+DF +S +      +        
Sbjct: 114 QILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARP 170

Query: 101 RVLGTFSYHAP 111
            + G+  + AP
Sbjct: 171 SLQGSVFWMAP 181

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 36.1 bits (84), Expect = 0.002
 Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 15/70 (21%)

Query: 52  IVVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTR 101
           I+ + LRGL YLHE     +I RDI+  NI           DF +S Q  +   R ++  
Sbjct: 118 ILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRRNT-- 172

Query: 102 VLGTFSYHAP 111
            +GT  + AP
Sbjct: 173 FIGTPYWMAP 182

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 35.9 bits (83), Expect = 0.002
 Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 29/104 (27%)

Query: 3   HENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGA-------QPSPVLDWMTRVRIVVD 55
           H N+V+L+G CV+     + I+I+  +     V G        +    L     +++ +D
Sbjct: 51  HPNIVKLIGVCVQ----KQPIYIVMEL-----VPGGSLLTFLRKKKNRLTVKKLLQMSLD 101

Query: 56  ALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQ 89
           A  G+EYL  K   + I RD+ + N          I+DF +S +
Sbjct: 102 AAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRE 142

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 35.8 bits (83), Expect = 0.002
 Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 24/96 (25%)

Query: 30  TC----KKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI---- 81
           TC     K +QG  P  +L  MT     V  ++ L YL EK    +I RD++ SNI    
Sbjct: 98  TCLDKLLKRIQGPIPEDILGKMT-----VAIVKALHYLKEK--HGVIHRDVKPSNILLDA 150

Query: 82  ------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP 111
                  DF +S +  +  A+   TR  G  +Y AP
Sbjct: 151 SGNVKLCDFGISGRLVDSKAK---TRSAGCAAYMAP 183

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 35.2 bits (81), Expect = 0.002
 Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 22/78 (28%)

Query: 50  VRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-----------IADFNLSNQAPNMAARLH 98
           +      LRGL YLHE     II RD++ +N           IADF     A  +AA+  
Sbjct: 106 INYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADF---GAAARLAAKGT 159

Query: 99  ST-----RVLGTFSYHAP 111
                  ++LGT ++ AP
Sbjct: 160 GAGEFQGQLLGTIAFMAP 177

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 35.2 bits (81), Expect = 0.003
 Identities = 35/133 (26%), Positives = 49/133 (36%), Gaps = 38/133 (28%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVL--DW-------MTRVR 51
           LKH N+V+ LG   E                 + V G   S +L   W        T + 
Sbjct: 62  LKHRNIVQYLGSDSENG---------FFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIF 112

Query: 52  IVVDALRGLEYLHEKVQPSIIQRDIRSSN-----------IADFNLSNQAPNMAARLH-- 98
                L GL+YLH+     I+ RDI+  N           I+DF  S +     A ++  
Sbjct: 113 YTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSKR----LAGINPC 165

Query: 99  STRVLGTFSYHAP 111
           +    GT  Y AP
Sbjct: 166 TETFTGTLQYMAP 178

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	111
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.92
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.91
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.91
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.91
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.9
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.89
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.89
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.87
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.87
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.87
KOG0578	550	consensus p21-activated serine/threonine protein k	99.86
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.86
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.86
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.86
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.84
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.84
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.84
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.83
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.83
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.83
KOG0198	313	consensus MEKK and related serine/threonine protei	99.82
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.81
KOG0589	426	consensus Serine/threonine protein kinase [General	99.81
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.81
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.81
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.81
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.8
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.8
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.8
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.79
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.79
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.79
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.78
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.78
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.78
KOG0584	632	consensus Serine/threonine protein kinase [General	99.78
PTZ00267	478	NIMA-related protein kinase; Provisional	99.77
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.77
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.77
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.77
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.76
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.76
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.76
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.75
KOG3653	534	consensus Transforming growth factor beta/activin	99.75
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.75
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.75
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.75
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.75
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.75
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.75
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.75
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.74
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.74
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.74
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.74
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.74
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.73
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.73
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.73
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.73
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.73
PHA03211	461	serine/threonine kinase US3; Provisional	99.73
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.73
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.73
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.73
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.72
KOG0586	596	consensus Serine/threonine protein kinase [General	99.72
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.72
PHA03212	391	serine/threonine kinase US3; Provisional	99.72
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.72
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.72
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.72
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.72
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.72
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.72
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.71
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.71
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.71
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.71
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.71
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.71
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.7
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.7
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.7
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.7
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.7
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.7
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.7
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.7
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.7
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.7
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.69
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.69
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.69
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.69
PHA03207	392	serine/threonine kinase US3; Provisional	99.69
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.69
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.69
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.69
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.69
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.69
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.69
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.69
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.69
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.69
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.68
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.68
PTZ00036	440	glycogen synthase kinase; Provisional	99.68
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.68
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.68
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.68
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.68
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.67
PHA03209	357	serine/threonine kinase US3; Provisional	99.67
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.67
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.67
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.67
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.67
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.67
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.67
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.67
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.67
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.66
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.66
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.66
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.66
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.66
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.66
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.66
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.66
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.66
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.65
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.65
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.65
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.65
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.65
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.65
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.65
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.65
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.65
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.65
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.65
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.65
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.64
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.64
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.64
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.64
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.64
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.64
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.64
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.64
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.64
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.64
KOG1152	772	consensus Signal transduction serine/threonine kin	99.63
PHA03210	501	serine/threonine kinase US3; Provisional	99.63
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.63
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.63
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.63
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.63
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.63
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.62
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.62
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.62
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.62
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.62
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.62
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.62
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.62
PHA02988	283	hypothetical protein; Provisional	99.62
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.62
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.61
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.61
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.61
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.61
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.61
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.61
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.61
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.61
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.61
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.61
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.61
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.61
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.61
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.6
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.6
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.6
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.6
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.6
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.6
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.6
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.6
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.6
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.6
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.6
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.6
PTZ00283	496	serine/threonine protein kinase; Provisional	99.6
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.6
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.6
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.6
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.6
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.6
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.6
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.6
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.59
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.59
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.59
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.59
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.59
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.59
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.59
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.59
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.59
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.59
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.59
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.58
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.58
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.58
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.58
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.58
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.58
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.58
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.58
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.58
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.58
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.58
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.57
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.57
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.57
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.57
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.57
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.57
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.57
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.57
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.57
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.57
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.57
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.57
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.57
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.57
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.57
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.56
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.56
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.56
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.56
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.56
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.56
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.56
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.56
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.56
KOG0610	459	consensus Putative serine/threonine protein kinase	99.56
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.56
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.56
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.55
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.55
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.55
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.55
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.55
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.55
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.55
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.55
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.55
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.55
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.55
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.55
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.55
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.54
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.54
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.54
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.54
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.54
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.54
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.54
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.54
PHA02882	294	putative serine/threonine kinase; Provisional	99.54
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.54
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.54
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.54
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.54
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.53
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.53
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.53
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.53
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.53
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.53
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.53
PLN00009	294	cyclin-dependent kinase A; Provisional	99.53
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.53
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.52
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.52
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.52
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.52
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.52
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.52
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.51
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.51
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.51
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.51
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.51
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.51
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.51
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.51
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.51
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.51
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.5
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.5
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.5
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.5
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.5
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.5
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.5
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.5
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.5
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.5
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.5
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.49
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.49
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.49
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.49
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.49
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.49
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.49
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.49
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.49
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.49
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.49
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.49
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.48
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.48
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.48
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.48
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.48
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.48
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.48
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.48
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.48
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.48
KOG0605	550	consensus NDR and related serine/threonine kinases	99.48
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.48
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.48
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.47
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.47
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.47
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.47
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.47
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.47
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.47
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.46
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.46
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.46
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.46
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.46
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.46
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.46
PTZ00284	467	protein kinase; Provisional	99.45
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.45
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.45
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.45
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.44
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.44
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.43
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.43
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.42
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.42
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.41
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.41
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.41
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.41
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.41
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.41
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.41
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.4
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.4
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.4
PLN00181	793	protein SPA1-RELATED; Provisional	99.4
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.4
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.39
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.39
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.38
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.38
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.38
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.38
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.37
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.37
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.36
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.36
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.32
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.31
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.27
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.26
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.21
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.21
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.15
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.14
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.14
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.13
PRK10345	210	hypothetical protein; Provisional	99.11
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.1
PRK09188	365	serine/threonine protein kinase; Provisional	99.06
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.06
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.05
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.05
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.05
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	98.99
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	98.97
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	98.96
KOG1167	418	consensus Serine/threonine protein kinase of the C	98.92
KOG1290	590	consensus Serine/threonine protein kinase [Signal	98.9
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	98.89
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	98.87
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	98.84
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	98.76
COG0515	384	SPS1 Serine/threonine protein kinase [General func	98.75
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	98.7
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.69
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	98.54
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	98.52
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	98.52
PRK14879	211	serine/threonine protein kinase; Provisional	98.47
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	98.35
smart00090	237	RIO RIO-like kinase.	98.35
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.24
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	98.19
PRK12274	218	serine/threonine protein kinase; Provisional	98.06
KOG0590	601	consensus Checkpoint kinase and related serine/thr	97.99
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	97.93
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	97.91
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	97.86
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	97.82
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	97.77
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	97.77
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	97.71
KOG1266	458	consensus Protein kinase [Signal transduction mech	97.41
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	97.38
KOG3087	229	consensus Serine/threonine protein kinase [General	96.97
KOG0606	1205	consensus Microtubule-associated serine/threonine	96.94
KOG1243	690	consensus Protein kinase [General function predict	96.92
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	96.63
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	96.38
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	96.15
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	95.96
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	95.8
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	95.41
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	95.34
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	94.51
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	94.4
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	94.27
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	92.51
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	89.42
PRK09902	216	hypothetical protein; Provisional	87.81
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	87.01
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	85.61
KOG0576	829	consensus Mitogen-activated protein kinase kinase	84.35
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	81.49

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.92  E-value=1e-25  Score=133.47  Aligned_cols=102  Identities=25%  Similarity=0.329  Sum_probs=83.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      |+|||||.+++++..++...++.||+..|++...+.   ....+++..+..++.|++.|+++||++   +|+|||+||.|
T Consensus        66 l~H~nIV~l~d~~~~~~~i~lVMEyC~gGDLs~yi~---~~~~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQN  139 (429)
T KOG0595|consen   66 LKHPNIVRLLDCIEDDDFIYLVMEYCNGGDLSDYIR---RRGRLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQN  139 (429)
T ss_pred             cCCcceeeEEEEEecCCeEEEEEEeCCCCCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcce
Confidence            689999999999999775555555555555544444   333499999999999999999999999   99999999999


Q ss_pred             ----------------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                      |.|||+++.+.+..-   ..+.+|++-||||
T Consensus       140 iLLs~~~~~~~~~~LKIADFGfAR~L~~~~~---a~tlcGSplYMAP  183 (429)
T KOG0595|consen  140 ILLSTTARNDTSPVLKIADFGFARFLQPGSM---AETLCGSPLYMAP  183 (429)
T ss_pred             EEeccCCCCCCCceEEecccchhhhCCchhH---HHHhhCCccccCH
Confidence                            479999998875432   5678999999998

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=1.2e-24  Score=130.83  Aligned_cols=108  Identities=44%  Similarity=0.749  Sum_probs=89.4

Q ss_pred             CCCccceeeeeeeeeCCc-cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEGNL-RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~   79 (111)
                      ++|||+|+|+|+|.+.+. ..++|++|.++++.+.+...... .++|.++..++.+++.|+.|||...++.|+|||+|++
T Consensus       128 l~H~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKss  206 (361)
T KOG1187|consen  128 LRHPNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSS  206 (361)
T ss_pred             CCCcCcccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHH
Confidence            589999999999998884 88999999999887777765543 5899999999999999999999987778999999999


Q ss_pred             C----------cCCCcccccCCCCccccccccc-CccccccCC
Q 047898           80 N----------IADFNLSNQAPNMAARLHSTRV-LGTFSYHAP  111 (111)
Q Consensus        80 n----------i~~~g~~~~~~~~~~~~~~~~~-~~~~~~~aP  111 (111)
                      |          ++|||+++........  ..+. .||..|+||
T Consensus       207 NILLD~~~~aKlsDFGLa~~~~~~~~~--~~~~~~gt~gY~~P  247 (361)
T KOG1187|consen  207 NILLDEDFNAKLSDFGLAKLGPEGDTS--VSTTVMGTFGYLAP  247 (361)
T ss_pred             HeeECCCCCEEccCccCcccCCccccc--eeeecCCCCccCCh
Confidence            9          4899999655431111  2222 789999988

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.91  E-value=1e-24  Score=130.77  Aligned_cols=105  Identities=33%  Similarity=0.478  Sum_probs=87.5

Q ss_pred             CCCccceeeeeeeeeCC-ccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC-eeecCCCC
Q 047898            1 LKHENLVELLGYCVEGN-LRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPS-IIQRDIRS   78 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~-i~h~~l~~   78 (111)
                      ++|||||+++|+|.++. ...++.+++..+.+...+... ....+++..+..++.+++.|+.|+|++   + |+|||+|+
T Consensus        96 l~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~  171 (362)
T KOG0192|consen   96 LRHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKS  171 (362)
T ss_pred             CCCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccCh
Confidence            68999999999999876 567888999999888877664 334499999999999999999999999   7 99999999


Q ss_pred             CC-----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           79 SN-----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        79 ~n-----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +|           |+|||+++........  .....||+.||||
T Consensus       172 ~NiLv~~~~~~~KI~DFGlsr~~~~~~~~--~~~~~GT~~wMAP  213 (362)
T KOG0192|consen  172 DNILVDLKGKTLKIADFGLSREKVISKTS--MTSVAGTYRWMAP  213 (362)
T ss_pred             hhEEEcCCCCEEEECCCccceeecccccc--ccCCCCCccccCh
Confidence            99           5899999866543211  2336899999998

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.91  E-value=7.1e-25  Score=134.88  Aligned_cols=103  Identities=28%  Similarity=0.379  Sum_probs=87.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      |+|||||+++++|++.+.-.++.|.++.+++..++.   ....+++.++..+..||+.|+.|||+.   +|+|||+|-.|
T Consensus        75 L~HpnIV~f~~~FEDs~nVYivLELC~~~sL~el~K---rrk~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGN  148 (592)
T KOG0575|consen   75 LKHPNIVQFYHFFEDSNNVYIVLELCHRGSLMELLK---RRKPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGN  148 (592)
T ss_pred             cCCCcEEeeeeEeecCCceEEEEEecCCccHHHHHH---hcCCCCcHHHHHHHHHHHHHHHHHHhc---Cceecccchhh
Confidence            689999999999999776666667776666555544   334499999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                |.|||+|..+....+.  ..+.+||+.|.||
T Consensus       149 lfL~~~~~VKIgDFGLAt~le~~~Er--k~TlCGTPNYIAP  187 (592)
T KOG0575|consen  149 LFLNENMNVKIGDFGLATQLEYDGER--KKTLCGTPNYIAP  187 (592)
T ss_pred             eeecCcCcEEecccceeeeecCcccc--cceecCCCcccCh
Confidence                      6999999988766554  5678999999998

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.90  E-value=2.1e-24  Score=128.32  Aligned_cols=102  Identities=25%  Similarity=0.305  Sum_probs=83.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      |+|||||+++++|..++...++.++++.|++.+...   .+..+.+..-..++.|++.|+.|||++   +|+||||||+|
T Consensus       233 L~HP~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv---~nk~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeN  306 (475)
T KOG0615|consen  233 LSHPNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVV---ANKYLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPEN  306 (475)
T ss_pred             cCCCCEEEEeeeeecCCceEEEEEEecCccHHHHHH---hccccccchhHHHHHHHHHHHHHHHHc---CcccccCCcce
Confidence            689999999999999776666777777766655443   344477777788999999999999999   99999999999


Q ss_pred             -------------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 -------------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 -------------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                   |+|||+++......-   ..+++||+.|.||
T Consensus       307 ILl~~~~e~~llKItDFGlAK~~g~~sf---m~TlCGTpsYvAP  347 (475)
T KOG0615|consen  307 ILLSNDAEDCLLKITDFGLAKVSGEGSF---MKTLCGTPSYVAP  347 (475)
T ss_pred             EEeccCCcceEEEecccchhhcccccee---hhhhcCCccccCh
Confidence                         489999997763322   5688999999998

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.89  E-value=5.1e-24  Score=124.78  Aligned_cols=103  Identities=23%  Similarity=0.241  Sum_probs=85.5

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||+||.++-.|++++...++.+++..|.+..-+.   +...++++++.+|++.++.|+.|||+.   +|+|||+||+|
T Consensus        82 v~hPFiv~l~ysFQt~~kLylVld~~~GGeLf~hL~---~eg~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPEN  155 (357)
T KOG0598|consen   82 IKHPFIVKLIYSFQTEEKLYLVLDYLNGGELFYHLQ---REGRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPEN  155 (357)
T ss_pred             CCCCcEeeeEEecccCCeEEEEEeccCCccHHHHHH---hcCCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHH
Confidence            589999999999999887767767766665544443   344499999999999999999999999   99999999999


Q ss_pred             c----------CCCcccccCCCCcccccccccCccccccCC
Q 047898           81 I----------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 i----------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |          .|||+++........  +.+++||+.||||
T Consensus       156 ILLd~~GHi~LtDFgL~k~~~~~~~~--t~tfcGT~eYmAP  194 (357)
T KOG0598|consen  156 ILLDEQGHIKLTDFGLCKEDLKDGDA--TRTFCGTPEYMAP  194 (357)
T ss_pred             eeecCCCcEEEeccccchhcccCCCc--cccccCCccccCh
Confidence            3          899999876555443  5678999999998

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.89  E-value=9.8e-24  Score=123.75  Aligned_cols=100  Identities=27%  Similarity=0.339  Sum_probs=85.2

Q ss_pred             CCccceeeeeeeeeCCc-cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeecCCCCC
Q 047898            2 KHENLVELLGYCVEGNL-RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHE-KVQPSIIQRDIRSS   79 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~-~~~~~i~h~~l~~~   79 (111)
                      +||+||.++|.|+..+. ..+..|||+.+++...+...   ..+++.....++.+++.|+.|||. .   +|+|||+||+
T Consensus       135 ~spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~~---g~i~E~~L~~ia~~VL~GL~YLh~~~---~IIHRDIKPs  208 (364)
T KOG0581|consen  135 QSPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKRV---GRIPEPVLGKIARAVLRGLSYLHEER---KIIHRDIKPS  208 (364)
T ss_pred             CCCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhhcc---CeeeccCCHH
Confidence            68999999999999874 66777888888877776544   338999999999999999999996 6   9999999999


Q ss_pred             C----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           80 N----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |          |+|||+++.+-+.    ...+++||..||||
T Consensus       209 NlLvNskGeVKicDFGVS~~lvnS----~a~tfvGT~~YMsP  246 (364)
T KOG0581|consen  209 NLLVNSKGEVKICDFGVSGILVNS----IANTFVGTSAYMSP  246 (364)
T ss_pred             HeeeccCCCEEeccccccHHhhhh----hcccccccccccCh
Confidence            9          5999999877655    24678999999998

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.87  E-value=9e-24  Score=122.00  Aligned_cols=103  Identities=22%  Similarity=0.270  Sum_probs=86.3

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      |+|+|+|.++++|........+++++++..+..+-..-.+   ++...+..++.|++.|+.|+|++   +++|||+||+|
T Consensus        58 LkH~NLVnLiEVFrrkrklhLVFE~~dhTvL~eLe~~p~G---~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPEN  131 (396)
T KOG0593|consen   58 LKHENLVNLIEVFRRKRKLHLVFEYCDHTVLHELERYPNG---VPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPEN  131 (396)
T ss_pred             cccchHHHHHHHHHhcceeEEEeeecchHHHHHHHhccCC---CCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhh
Confidence            6899999999999998888889999998776655443333   88999999999999999999999   99999999999


Q ss_pred             c----------CCCcccccCCCCcccccccccCccccccCC
Q 047898           81 I----------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 i----------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |          +|||+||.+......  ..-.+.|.||.||
T Consensus       132 ILit~~gvvKLCDFGFAR~L~~pgd~--YTDYVATRWYRaP  170 (396)
T KOG0593|consen  132 ILITQNGVVKLCDFGFARTLSAPGDN--YTDYVATRWYRAP  170 (396)
T ss_pred             eEEecCCcEEeccchhhHhhcCCcch--hhhhhhhhhccCh
Confidence            3          899999988753322  3446789999998

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.87  E-value=1.3e-22  Score=123.19  Aligned_cols=106  Identities=23%  Similarity=0.290  Sum_probs=87.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      |+|++||+++|+|...++..++.++|..+++.+++... ....+...+...++.||++||+||.++   ++||||+..+|
T Consensus       258 L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~-~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARN  333 (468)
T KOG0197|consen  258 LRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTR-EGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARN  333 (468)
T ss_pred             CcccCeEEEEEEEecCCceEEEEEecccCcHHHHhhhc-CCCccchHHHHHHHHHHHHHHHHHHhC---Cccchhhhhhh
Confidence            68999999999999988788888999999998888763 333488899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                |+|||+++. ..+..++.....--++.|.||
T Consensus       334 iLV~~~~~vKIsDFGLAr~-~~d~~Y~~~~~~kfPIkWtAP  373 (468)
T KOG0197|consen  334 ILVDEDLVVKISDFGLARL-IGDDEYTASEGGKFPIKWTAP  373 (468)
T ss_pred             eeeccCceEEEcccccccc-cCCCceeecCCCCCCceecCH
Confidence                      599999994 344444333344456788887

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.87  E-value=1.3e-23  Score=120.36  Aligned_cols=109  Identities=22%  Similarity=0.309  Sum_probs=79.2

Q ss_pred             CCCccceeeee-eeeeCCc-cchhhhhhhhhhcccCcC-CCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCC-CeeecCC
Q 047898            1 LKHENLVELLG-YCVEGNL-RDELIWIIHVITCKKGVQ-GAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQP-SIIQRDI   76 (111)
Q Consensus         1 l~h~~iv~l~~-~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~-~i~h~~l   76 (111)
                      |+|||||++++ .|.+... ..++.++...|++..... .......+++.+++.++.|++.|+..+|+.-+. .++||||
T Consensus        75 L~HpNIVqYy~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDI  154 (375)
T KOG0591|consen   75 LNHPNIVQYYAHSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDI  154 (375)
T ss_pred             cCCchHHHHHHHhhhccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccC
Confidence            68999999998 5544333 334444444454433322 222344489999999999999999999993211 3899999


Q ss_pred             CCCCc----------CCCcccccCCCCcccccccccCccccccCC
Q 047898           77 RSSNI----------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        77 ~~~ni----------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      ||+||          .|||+++.+.+...-  ..+.+||++||+|
T Consensus       155 KPaNIFl~~~gvvKLGDfGL~r~l~s~~tf--A~S~VGTPyYMSP  197 (375)
T KOG0591|consen  155 KPANIFLTANGVVKLGDFGLGRFLSSKTTF--AHSLVGTPYYMSP  197 (375)
T ss_pred             cchheEEcCCCceeeccchhHhHhcchhHH--HHhhcCCCcccCH
Confidence            99993          899999988766543  5778999999998

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.86  E-value=9.5e-23  Score=124.80  Aligned_cols=102  Identities=26%  Similarity=0.396  Sum_probs=87.3

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      .+|+|||.+++.|.-.+..+.+.++|+.+.+.+..    ....+++.++..++.+++.||.|||.+   +|+|||||..|
T Consensus       327 ~~H~NiVnfl~Sylv~deLWVVMEym~ggsLTDvV----t~~~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDn  399 (550)
T KOG0578|consen  327 LHHPNIVNFLDSYLVGDELWVVMEYMEGGSLTDVV----TKTRMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDN  399 (550)
T ss_pred             ccchHHHHHHHHhcccceeEEEEeecCCCchhhhh----hcccccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccce
Confidence            47999999999999888888888998887755443    344488999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                +.|||++.++......  -.+.+||++||||
T Consensus       400 ILL~~~g~vKltDFGFcaqi~~~~~K--R~TmVGTPYWMAP  438 (550)
T KOG0578|consen  400 ILLTMDGSVKLTDFGFCAQISEEQSK--RSTMVGTPYWMAP  438 (550)
T ss_pred             eEeccCCcEEEeeeeeeeccccccCc--cccccCCCCccch
Confidence                      4899999988765533  4678999999998

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.86  E-value=1.3e-22  Score=128.67  Aligned_cols=108  Identities=26%  Similarity=0.384  Sum_probs=91.5

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCC-----------CCCCCHHHHHHHHHHHHHHHHHhhhcCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQP-----------SPVLDWMTRVRIVVDALRGLEYLHEKVQP   69 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~l~~~~~~~~~~~i~~~l~~lh~~~~~   69 (111)
                      |+|||||+|+|+|..+++...++|||.++++..++....+           ...++..+++.++.||+.||.||-++   
T Consensus       546 l~H~nIVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---  622 (774)
T KOG1026|consen  546 LQHPNIVRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---  622 (774)
T ss_pred             ccCCCeEEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence            6899999999999999999999999999998777654322           12278889999999999999999999   


Q ss_pred             CeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           70 SIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        70 ~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +++|||+-.+|          |+|||+++...+.+.+.....-.-+++||+|
T Consensus       623 ~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMpp  674 (774)
T KOG1026|consen  623 HFVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPP  674 (774)
T ss_pred             cccccchhhhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCH
Confidence            99999999999          6999999998887766443333458999997

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.86  E-value=7.3e-22  Score=120.00  Aligned_cols=104  Identities=24%  Similarity=0.263  Sum_probs=80.3

Q ss_pred             CCCccceeeeeeeeeC--CccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 047898            1 LKHENLVELLGYCVEG--NLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRS   78 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~   78 (111)
                      |+||||++|.+..+..  ....++++||++-..+.+.   .+.-.|+..++..++.|++.|+.|||++   +++|||||.
T Consensus       173 l~HpNIikL~eivt~~~~~siYlVFeYMdhDL~GLl~---~p~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~  246 (560)
T KOG0600|consen  173 LDHPNIIKLEEIVTSKLSGSIYLVFEYMDHDLSGLLS---SPGVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKG  246 (560)
T ss_pred             cCCCcccceeeEEEecCCceEEEEEecccchhhhhhc---CCCcccChHHHHHHHHHHHHHHHHHhhc---Ceeeccccc
Confidence            6899999999999876  3445667777754333221   2233489999999999999999999999   999999999


Q ss_pred             CC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           79 SN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        79 ~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +|          |.|||+++......... ....+.|.||.+|
T Consensus       247 SNiLidn~G~LKiaDFGLAr~y~~~~~~~-~T~rVvTLWYRpP  288 (560)
T KOG0600|consen  247 SNILIDNNGVLKIADFGLARFYTPSGSAP-YTSRVVTLWYRPP  288 (560)
T ss_pred             cceEEcCCCCEEeccccceeeccCCCCcc-cccceEEeeccCh
Confidence            99          58999999665544321 3456779999987

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.86  E-value=2.7e-22  Score=121.18  Aligned_cols=100  Identities=21%  Similarity=0.332  Sum_probs=81.1

Q ss_pred             CccceeeeeeeeeCC-ccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            3 HENLVELLGYCVEGN-LRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         3 h~~iv~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      |||||++++++.+.+ ...+++|+|+. .+..+...  +...|++..+..++.||+.|+.|+|.+   ++.|||+||+| 
T Consensus        68 hpniikL~Evi~d~~~~L~fVfE~Md~-NLYqLmK~--R~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENi  141 (538)
T KOG0661|consen   68 HPNIIKLKEVIRDNDRILYFVFEFMDC-NLYQLMKD--RNRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENI  141 (538)
T ss_pred             CCcchhhHHHhhccCceEeeeHHhhhh-hHHHHHhh--cCCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhhe
Confidence            999999999999877 44555565553 23333333  245599999999999999999999999   99999999999 


Q ss_pred             ---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                               |+|||+||.+.+...+   ...+.|.||+||
T Consensus       142 Li~~~~~iKiaDFGLARev~SkpPY---TeYVSTRWYRAP  178 (538)
T KOG0661|consen  142 LISGNDVIKIADFGLAREVRSKPPY---TEYVSTRWYRAP  178 (538)
T ss_pred             EecccceeEecccccccccccCCCc---chhhhcccccch
Confidence                     4899999998877653   456889999998

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.84  E-value=1.9e-21  Score=111.58  Aligned_cols=101  Identities=23%  Similarity=0.309  Sum_probs=84.1

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      -||+|+++.++++++.+.+.+++.+..+.+-+.+   .+...+++.+...++.|+..|+.|+|..   .|+|||+||+| 
T Consensus        81 GHP~II~l~D~yes~sF~FlVFdl~prGELFDyL---ts~VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENI  154 (411)
T KOG0599|consen   81 GHPYIIDLQDVYESDAFVFLVFDLMPRGELFDYL---TSKVTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENI  154 (411)
T ss_pred             CCCcEEEeeeeccCcchhhhhhhhcccchHHHHh---hhheeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhhe
Confidence            5999999999999988777777777776655444   3444488999999999999999999999   99999999999 


Q ss_pred             ---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                               |+|||++..+....+   ....+||+.|+||
T Consensus       155 Llddn~~i~isDFGFa~~l~~Gek---LrelCGTPgYLAP  191 (411)
T KOG0599|consen  155 LLDDNMNIKISDFGFACQLEPGEK---LRELCGTPGYLAP  191 (411)
T ss_pred             eeccccceEEeccceeeccCCchh---HHHhcCCCcccCh
Confidence                     489999987765443   4567899999998

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.84  E-value=1.4e-21  Score=112.44  Aligned_cols=100  Identities=24%  Similarity=0.271  Sum_probs=81.5

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||+++++.+.|.+......+.+++..+.+-..+   ++...++.+.+.+++.+++.|+.|+|++   .+++||+||+|
T Consensus       101 v~~PFlv~l~~t~~d~~~lymvmeyv~GGElFS~L---rk~~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPEN  174 (355)
T KOG0616|consen  101 VSHPFLVKLYGTFKDNSNLYMVMEYVPGGELFSYL---RKSGRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPEN  174 (355)
T ss_pred             ccCceeEEEEEeeccCCeEEEEEeccCCccHHHHH---HhcCCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHH
Confidence            47999999999999877666665665555443333   3334499999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                |.|||+++.....     +.+.+||+.|+||
T Consensus       175 iLlD~~G~iKitDFGFAK~v~~r-----T~TlCGTPeYLAP  210 (355)
T KOG0616|consen  175 LLLDQNGHIKITDFGFAKRVSGR-----TWTLCGTPEYLAP  210 (355)
T ss_pred             eeeccCCcEEEEeccceEEecCc-----EEEecCCccccCh
Confidence                      4899999877544     3567999999998

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.84  E-value=3.4e-21  Score=116.33  Aligned_cols=101  Identities=20%  Similarity=0.240  Sum_probs=77.9

Q ss_pred             CccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC--
Q 047898            3 HENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN--   80 (111)
Q Consensus         3 h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n--   80 (111)
                      ||||+++++++.......++.++...++   ++........+.+..+..++.|++.|+.|||++   +|+|||+|++|  
T Consensus        79 HpnI~~l~ev~~t~~~~~ivmEy~~gGd---L~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENil  152 (370)
T KOG0583|consen   79 HPNIIRLLEVFATPTKIYIVMEYCSGGD---LFDYIVNKGRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENIL  152 (370)
T ss_pred             CCCEeEEEEEEecCCeEEEEEEecCCcc---HHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEE
Confidence            9999999999998776444444444433   333333344488899999999999999999999   99999999999  


Q ss_pred             ---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                               ++|||++.........  ..+.+||+.|+||
T Consensus       153 ld~~~~~~Kl~DFG~s~~~~~~~~~--l~t~cGsp~Y~aP  190 (370)
T KOG0583|consen  153 LDGNEGNLKLSDFGLSAISPGEDGL--LKTFCGSPAYAAP  190 (370)
T ss_pred             ecCCCCCEEEeccccccccCCCCCc--ccCCCCCcccCCH
Confidence                     4899999876312111  5678999999998

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.83  E-value=1e-21  Score=124.14  Aligned_cols=106  Identities=27%  Similarity=0.372  Sum_probs=88.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      |+|.|||+++|+|..++...++.+.+..+++..++....+...-.+.++.+|..||++|+.|||.+   .|+|||||..|
T Consensus       629 LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDN  705 (1226)
T KOG4279|consen  629 LRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDN  705 (1226)
T ss_pred             HhhHhHHHHhhccCCCCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCc
Confidence            589999999999998887777777777777766666554443346788999999999999999999   99999999999


Q ss_pred             -----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 -----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 -----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                 |+|||.++.+-.-+..  +.++.||..||||
T Consensus       706 VLvNTySGvlKISDFGTsKRLAginP~--TETFTGTLQYMAP  745 (1226)
T KOG4279|consen  706 VLVNTYSGVLKISDFGTSKRLAGINPC--TETFTGTLQYMAP  745 (1226)
T ss_pred             EEEeeccceEEecccccchhhccCCcc--ccccccchhhhCh
Confidence                       6999999887665544  6778999999998

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.83  E-value=1e-20  Score=114.66  Aligned_cols=106  Identities=32%  Similarity=0.470  Sum_probs=76.3

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCC-CCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPV-LDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~   79 (111)
                      ++|||||+|+++.-+++. ..+|.+++.+..+..... ..... +...++..++..++.|+.|||.+   +|+||||||+
T Consensus       165 l~H~nVV~LiEvLDDP~s-~~~YlVley~s~G~v~w~-p~d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPs  239 (576)
T KOG0585|consen  165 LHHPNVVKLIEVLDDPES-DKLYLVLEYCSKGEVKWC-PPDKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPS  239 (576)
T ss_pred             cCCcCeeEEEEeecCccc-CceEEEEEeccCCccccC-CCCcccccHHHHHHHHHHHHHHHHHHHhc---Ceeccccchh
Confidence            589999999999887664 334444444433323222 22333 88999999999999999999999   9999999999


Q ss_pred             C----------cCCCcccccCCCCcc-cc--cccccCccccccCC
Q 047898           80 N----------IADFNLSNQAPNMAA-RL--HSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n----------i~~~g~~~~~~~~~~-~~--~~~~~~~~~~~~aP  111 (111)
                      |          |+|||++........ ..  .....+||+.||||
T Consensus       240 NLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~AP  284 (576)
T KOG0585|consen  240 NLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAP  284 (576)
T ss_pred             heEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccch
Confidence            9          599999875522111 10  13446899999998

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.83  E-value=6e-21  Score=111.59  Aligned_cols=103  Identities=27%  Similarity=0.390  Sum_probs=78.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhc--ccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITC--KKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRS   78 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~   78 (111)
                      .+|||||.+.++.+..+.. .+|.+|+.+.-  ...+ ...+ ..+...++..+..|++.|+.|||.+   -|+|||+|+
T Consensus       132 ~~H~NIV~vkEVVvG~~~d-~iy~VMe~~EhDLksl~-d~m~-q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~  205 (419)
T KOG0663|consen  132 ARHPNIVEVKEVVVGSNMD-KIYIVMEYVEHDLKSLM-ETMK-QPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKT  205 (419)
T ss_pred             cCCCCeeeeEEEEeccccc-eeeeeHHHHHhhHHHHH-Hhcc-CCCchHHHHHHHHHHHHHHHHHhhc---eeEecccch
Confidence            4799999999999876533 35555553322  1122 1112 3488899999999999999999999   999999999


Q ss_pred             CC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           79 SN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        79 ~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +|          |+|||+||...+..++  ....+-|.||.||
T Consensus       206 SNLLm~~~G~lKiaDFGLAR~ygsp~k~--~T~lVVTLWYRaP  246 (419)
T KOG0663|consen  206 SNLLLSHKGILKIADFGLAREYGSPLKP--YTPLVVTLWYRAP  246 (419)
T ss_pred             hheeeccCCcEEecccchhhhhcCCccc--CcceEEEeeecCH
Confidence            99          5999999988776554  4556789999987

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.82  E-value=2.6e-20  Score=109.63  Aligned_cols=106  Identities=26%  Similarity=0.322  Sum_probs=80.9

Q ss_pred             CCCccceeeeeeeeeCCc--cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 047898            1 LKHENLVELLGYCVEGNL--RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRS   78 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~   78 (111)
                      ++|||||+++|.....+.  ..++.+|...+++.+.......  .++++.+..+..|++.|+.|+|++   +++|+|+|+
T Consensus        71 l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~  145 (313)
T KOG0198|consen   71 LNHPNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKP  145 (313)
T ss_pred             CCCCCEEeeCCccccccCeeeEeeeeccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCccc
Confidence            579999999998555443  4455566667766666655443  399999999999999999999999   999999999


Q ss_pred             CC-----------cCCCcccccCCCCccc-ccccccCccccccCC
Q 047898           79 SN-----------IADFNLSNQAPNMAAR-LHSTRVLGTFSYHAP  111 (111)
Q Consensus        79 ~n-----------i~~~g~~~~~~~~~~~-~~~~~~~~~~~~~aP  111 (111)
                      +|           |+|||.+......... .......||+.||||
T Consensus       146 ~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maP  190 (313)
T KOG0198|consen  146 ANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAP  190 (313)
T ss_pred             ceEEEeCCCCeEEeccCccccccccccccccccccccCCccccCc
Confidence            99           4799988766541111 113457899999998

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.81  E-value=1.4e-20  Score=117.72  Aligned_cols=102  Identities=20%  Similarity=0.204  Sum_probs=84.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      |+||||++++++.++......+++|+..|.+-+.+..   ...+++.+...++.||+.|+.|||..   +|+|||+||+|
T Consensus        69 i~HpnVl~LydVwe~~~~lylvlEyv~gGELFdylv~---kG~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpEN  142 (786)
T KOG0588|consen   69 IEHPNVLRLYDVWENKQHLYLVLEYVPGGELFDYLVR---KGPLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPEN  142 (786)
T ss_pred             hcCCCeeeeeeeeccCceEEEEEEecCCchhHHHHHh---hCCCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchh
Confidence            5899999999999998877777787777766555543   34489999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                |+|||.|..-.....   ..+-+|++.|.||
T Consensus       143 lLLd~~~nIKIADFGMAsLe~~gkl---LeTSCGSPHYA~P  180 (786)
T KOG0588|consen  143 LLLDVKNNIKIADFGMASLEVPGKL---LETSCGSPHYAAP  180 (786)
T ss_pred             hhhhcccCEeeeccceeecccCCcc---ccccCCCcccCCc
Confidence                      699999875444322   5677999999998

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.81  E-value=4e-21  Score=116.17  Aligned_cols=105  Identities=22%  Similarity=0.292  Sum_probs=88.9

Q ss_pred             CCCccceeeeeeeeeCCc-cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEGNL-RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~   79 (111)
                      ++|||||.+++.++.++. ..++.+|.+.++........+ ...+++.++..++.|++.|+.|||++   +|+|||+|..
T Consensus        60 ~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~  135 (426)
T KOG0589|consen   60 LLHPNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCA  135 (426)
T ss_pred             ccCCCeeeeccchhcCCceEEEEEeecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhh
Confidence            589999999999998887 667778888777766665544 23489999999999999999999998   9999999999


Q ss_pred             C----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           80 N----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |          +.|||+++.+.+....  ..+.+||+.||+|
T Consensus       136 Nifltk~~~VkLgDfGlaK~l~~~~~~--a~tvvGTp~YmcP  175 (426)
T KOG0589|consen  136 NIFLTKDKKVKLGDFGLAKILNPEDSL--ASTVVGTPYYMCP  175 (426)
T ss_pred             hhhccccCceeecchhhhhhcCCchhh--hheecCCCcccCH
Confidence            9          4899999988776533  5678999999987

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.81  E-value=1.3e-20  Score=107.22  Aligned_cols=103  Identities=26%  Similarity=0.325  Sum_probs=80.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+.+.++|...+...+++++|+.-. .....  .+.-.++...+..++.+++.|++|||++   .|+|||+||.|
T Consensus        58 l~h~nIi~LiD~F~~~~~l~lVfEfm~tdL-e~vIk--d~~i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnN  131 (318)
T KOG0659|consen   58 LKHPNIIELIDVFPHKSNLSLVFEFMPTDL-EVVIK--DKNIILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNN  131 (318)
T ss_pred             ccCcchhhhhhhccCCCceEEEEEeccccH-HHHhc--ccccccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccc
Confidence            589999999999999887777877776332 22222  2333488889999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                +.|||+++...+....  ....+.|.||.||
T Consensus       132 LLis~~g~lKiADFGLAr~f~~p~~~--~~~~V~TRWYRAP  170 (318)
T KOG0659|consen  132 LLISSDGQLKIADFGLARFFGSPNRI--QTHQVVTRWYRAP  170 (318)
T ss_pred             eEEcCCCcEEeecccchhccCCCCcc--cccceeeeeccCh
Confidence                      4899999988765443  2223678899987

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.81  E-value=1.8e-20  Score=116.23  Aligned_cols=107  Identities=24%  Similarity=0.301  Sum_probs=91.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||+++|+|...++...+.+||++++++.++..+.... ........++.||++|+.||.+.   +++|||+.++|
T Consensus       592 LkhPNIveLvGVC~~DePicmI~EYmEnGDLnqFl~aheapt-~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rN  667 (807)
T KOG1094|consen  592 LKHPNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHELPT-AETAPGVSICTQIASGMAYLESL---NFVHRDLATRN  667 (807)
T ss_pred             cCCCCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhccCcc-cccchhHHHHHHHHHHHHHHHhh---chhhccccccc
Confidence            589999999999999999999999999999998887654333 45566778999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                |+|||.+|.+.+...+......+.+++|||+
T Consensus       668 cLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmaw  708 (807)
T KOG1094|consen  668 CLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAW  708 (807)
T ss_pred             eeecCcccEEecCcccccccccCCceeeecceeeeeeehhH
Confidence                      6999999988877665444456778999985

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.81  E-value=7.9e-21  Score=117.88  Aligned_cols=102  Identities=25%  Similarity=0.360  Sum_probs=81.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      |+|+|||.+.|+|....-..++.+++..+.+...+...   ...+......+..+|+.|+.|||.+   .|||||+|.-|
T Consensus       169 LkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~---~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPN  242 (904)
T KOG4721|consen  169 LKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAG---RPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPN  242 (904)
T ss_pred             ccCcceeeEeeeecCCceeEEeeeccccccHHHHHhcc---CccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCc
Confidence            68999999999999865555566666666666555432   2377788889999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                |+|||.++.+.....   .-+++||..||||
T Consensus       243 iLIs~~d~VKIsDFGTS~e~~~~ST---kMSFaGTVaWMAP  280 (904)
T KOG4721|consen  243 ILISYDDVVKISDFGTSKELSDKST---KMSFAGTVAWMAP  280 (904)
T ss_pred             eEeeccceEEeccccchHhhhhhhh---hhhhhhhHhhhCH
Confidence                      589999887655422   2457899999998

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.80  E-value=2.5e-20  Score=116.54  Aligned_cols=101  Identities=25%  Similarity=0.296  Sum_probs=82.0

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +||++++++.+|++.+..+++.+|...++   .. .......+++.++.+|++.++.|++|||.+   +||+||+|-+| 
T Consensus       427 ~HPFL~~L~~~fQT~~~l~fvmey~~Ggd---m~-~~~~~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNi  499 (694)
T KOG0694|consen  427 RHPFLVNLFSCFQTKEHLFFVMEYVAGGD---LM-HHIHTDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNL  499 (694)
T ss_pred             cCCeEeecccccccCCeEEEEEEecCCCc---EE-EEEecccccHHHHHHHHHHHHHHHHHHHhc---Cceeeecchhhe
Confidence            69999999999999776655555555544   22 222334499999999999999999999999   99999999999 


Q ss_pred             ---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                               |+|||+++........  +++++||+.||||
T Consensus       500 LLD~eGh~kiADFGlcKe~m~~g~~--TsTfCGTpey~aP  537 (694)
T KOG0694|consen  500 LLDTEGHVKIADFGLCKEGMGQGDR--TSTFCGTPEFLAP  537 (694)
T ss_pred             EEcccCcEEecccccccccCCCCCc--cccccCChhhcCh
Confidence                     5899999876644443  6889999999998

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.80  E-value=8.3e-20  Score=109.99  Aligned_cols=107  Identities=24%  Similarity=0.319  Sum_probs=88.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||++++.+|......+.+.-+|..|+..+++...-+.. +++..+..+..+++.|+.|+|.+   +-||||+|+.|
T Consensus        81 ~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~G-l~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgn  156 (516)
T KOG0582|consen   81 IDHPNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDG-LEEASIATILREVLKALDYLHQN---GHIHRDVKAGN  156 (516)
T ss_pred             cCCCCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHcccc-ccHHHHHHHHHHHHHHHHHHHhc---Cceeccccccc
Confidence            589999999999999888888888888887777665444433 88888999999999999999999   99999999999


Q ss_pred             c----------CCCcccccCCCCccccc-c-cccCccccccCC
Q 047898           81 I----------ADFNLSNQAPNMAARLH-S-TRVLGTFSYHAP  111 (111)
Q Consensus        81 i----------~~~g~~~~~~~~~~~~~-~-~~~~~~~~~~aP  111 (111)
                      |          +|||++..+........ . .+++|+++||||
T Consensus       157 ILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAP  199 (516)
T KOG0582|consen  157 ILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAP  199 (516)
T ss_pred             EEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcccccCh
Confidence            4          89998877665443321 2 567899999998

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.80  E-value=4.8e-20  Score=113.11  Aligned_cols=104  Identities=29%  Similarity=0.385  Sum_probs=83.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||+++|++....+..++.+.+..+.+.+.+.....  .++..+...++.+.+.|+.|||++   +++||||-.+|
T Consensus       218 l~H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~--~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARN  292 (474)
T KOG0194|consen  218 LNHPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKK--SLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARN  292 (474)
T ss_pred             CCCCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHH
Confidence            6899999999999998888888888888888777765433  489999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                |+|||+++.-......  ....-.+.+|+||
T Consensus       293 cL~~~~~~vKISDFGLs~~~~~~~~~--~~~~klPirWLAP  331 (474)
T KOG0194|consen  293 CLYSKKGVVKISDFGLSRAGSQYVMK--KFLKKLPIRWLAP  331 (474)
T ss_pred             heecCCCeEEeCccccccCCcceeec--cccccCcceecCh
Confidence                      6999998765311111  1122356889988

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.79  E-value=1.1e-19  Score=106.88  Aligned_cols=105  Identities=23%  Similarity=0.312  Sum_probs=74.8

Q ss_pred             CCCccceeeeeeeeeCCccc-----hhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecC
Q 047898            1 LKHENLVELLGYCVEGNLRD-----ELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRD   75 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~   75 (111)
                      ++|||||++.-+|.......     .+.++|........-.+-.....++...+..+..|+.+|+.|+|+.   +|+|||
T Consensus        74 l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRD  150 (364)
T KOG0658|consen   74 LDHPNIVRLLYFFSSSTESDEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRD  150 (364)
T ss_pred             cCCcCeeeEEEEEEecCCCchhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCC
Confidence            58999999998888655442     2445554332222222222233477777888999999999999998   999999


Q ss_pred             CCCCC-----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           76 IRSSN-----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        76 l~~~n-----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +||.|           |+|||.|+.+.....   ..+...|..|+||
T Consensus       151 IKPqNlLvD~~tg~LKicDFGSAK~L~~~ep---niSYicSRyYRaP  194 (364)
T KOG0658|consen  151 IKPQNLLVDPDTGVLKICDFGSAKVLVKGEP---NISYICSRYYRAP  194 (364)
T ss_pred             CChheEEEcCCCCeEEeccCCcceeeccCCC---ceeEEEeccccCH
Confidence            99999           599999987654432   2445677888887

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.79  E-value=2.7e-20  Score=104.46  Aligned_cols=103  Identities=28%  Similarity=0.383  Sum_probs=82.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      |+||||.+++++|.+.....++.++...++....+..... ..++..+...+..|++.|+.|+|.+   +++|||++|+|
T Consensus        79 L~hpnilrlY~~fhd~~riyLilEya~~gel~k~L~~~~~-~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpen  154 (281)
T KOG0580|consen   79 LRHPNILRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRM-KRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPEN  154 (281)
T ss_pred             cCCccHHhhhhheeccceeEEEEEecCCchHHHHHHhccc-ccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHH
Confidence            6899999999999987666666666666666666654333 3388889999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+.... .+.   -.+.+||.-|++|
T Consensus       155 lLlg~~~~lkiAdfGwsV~~p-~~k---R~tlcgt~dyl~p  191 (281)
T KOG0580|consen  155 LLLGSAGELKIADFGWSVHAP-SNK---RKTLCGTLDYLPP  191 (281)
T ss_pred             hccCCCCCeeccCCCceeecC-CCC---ceeeecccccCCH
Confidence                      58999987554 222   3678899999887

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.79  E-value=4.3e-20  Score=114.40  Aligned_cols=102  Identities=27%  Similarity=0.281  Sum_probs=81.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      |+|||||.+++.|++....+.+.++... ++...+..   ...++++++..++.+++.|+.|+|+.   +|+|+|+||.|
T Consensus        58 lkHpniv~m~esfEt~~~~~vVte~a~g-~L~~il~~---d~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqn  130 (808)
T KOG0597|consen   58 LKHPNIVEMLESFETSAHLWVVTEYAVG-DLFTILEQ---DGKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQN  130 (808)
T ss_pred             cCCcchhhHHHhhcccceEEEEehhhhh-hHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcce
Confidence            6899999999999987766666655443 33333332   33399999999999999999999999   99999999999


Q ss_pred             c----------CCCcccccCCCCcccccccccCccccccCC
Q 047898           81 I----------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 i----------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |          +|||+++.+...+.  ...+..||+.||||
T Consensus       131 iLl~~~~~~KlcdFg~Ar~m~~~t~--vltsikGtPlYmAP  169 (808)
T KOG0597|consen  131 ILLEKGGTLKLCDFGLARAMSTNTS--VLTSIKGTPLYMAP  169 (808)
T ss_pred             eeecCCCceeechhhhhhhcccCce--eeeeccCcccccCH
Confidence            4          89999997765432  24567899999998

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.78  E-value=8.7e-20  Score=119.33  Aligned_cols=108  Identities=21%  Similarity=0.367  Sum_probs=89.8

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCC----CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQP----SPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDI   76 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l   76 (111)
                      ++|||||+++|+|.+.+...++.++|+.+++..++...+.    ...+.......++.+++.|+.||+++   +++||||
T Consensus       752 f~HpNiv~liGv~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDL  828 (1025)
T KOG1095|consen  752 FDHPNIVSLIGVCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDL  828 (1025)
T ss_pred             CCCcceeeEEEeecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcch
Confidence            5899999999999998888899999999998888775532    23488889999999999999999999   9999999


Q ss_pred             CCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           77 RSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        77 ~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      ..+|          |.|||+|+.+.....+.......-+.+||||
T Consensus       829 AaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~P  873 (1025)
T KOG1095|consen  829 AARNCLLDERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPP  873 (1025)
T ss_pred             hhhheeecccCcEEEcccchhHhhhhchheeccCccccceecCCH
Confidence            9999          6999999976655444333334557899998

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.78  E-value=3.3e-20  Score=111.51  Aligned_cols=102  Identities=18%  Similarity=0.218  Sum_probs=79.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      |+||||++++++|++...-.++.+|...+.+.+.   ......+++.+...++.||++++.|||.+   +++|||+|.+|
T Consensus       110 LNHPhII~IyEVFENkdKIvivMEYaS~GeLYDY---iSer~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLEN  183 (668)
T KOG0611|consen  110 LNHPHIIQIYEVFENKDKIVIVMEYASGGELYDY---ISERGSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLEN  183 (668)
T ss_pred             cCCCceeehhhhhcCCceEEEEEEecCCccHHHH---HHHhccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhh
Confidence            6899999999999986544444444444444443   33444599999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                |.|||++.......   ..++++|++-|.+|
T Consensus       184 ILLD~N~NiKIADFGLSNly~~~k---fLqTFCGSPLYASP  221 (668)
T KOG0611|consen  184 ILLDQNNNIKIADFGLSNLYADKK---FLQTFCGSPLYASP  221 (668)
T ss_pred             eeecCCCCeeeeccchhhhhcccc---HHHHhcCCcccCCc
Confidence                      58999987654332   26788999988876

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.78  E-value=1.3e-19  Score=111.14  Aligned_cols=104  Identities=22%  Similarity=0.237  Sum_probs=83.5

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      .||.|++|+--|++.....++.++..+|++...+...   ..|++.....++.+|+.|++|+|++   +|||||+||+| 
T Consensus       132 ~hPgivkLy~TFQD~~sLYFvLe~A~nGdll~~i~K~---Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENI  205 (604)
T KOG0592|consen  132 GHPGIVKLYFTFQDEESLYFVLEYAPNGDLLDLIKKY---GSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENI  205 (604)
T ss_pred             CCCCeEEEEEEeecccceEEEEEecCCCcHHHHHHHh---CcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhhe
Confidence            6999999999999977776777777777766665544   4489999999999999999999999   99999999999 


Q ss_pred             ---------cCCCcccccCCCCccc---------ccc--cccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAAR---------LHS--TRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~---------~~~--~~~~~~~~~~aP  111 (111)
                               |.|||.++.+......         ...  .+++||-.|.+|
T Consensus       206 LLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSP  256 (604)
T KOG0592|consen  206 LLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSP  256 (604)
T ss_pred             eEcCCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCH
Confidence                     5899999876643221         112  458899999876

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.78  E-value=1.1e-19  Score=112.80  Aligned_cols=103  Identities=25%  Similarity=0.385  Sum_probs=80.2

Q ss_pred             CCCccceeeeeeeeeCCc--cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 047898            1 LKHENLVELLGYCVEGNL--RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRS   78 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~   78 (111)
                      |+|||||+++.+..+...  ..++.+.+..|.+.....+   ...+....+..++.||+.||.|||++ .|+|+|||+|-
T Consensus        98 L~H~NIirfy~SW~d~~n~~in~iTEL~TSGtLr~Y~kk---~~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKC  173 (632)
T KOG0584|consen   98 LKHPNIIRFYDSWVDTDNKTINFITELFTSGTLREYRKK---HRRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKC  173 (632)
T ss_pred             CCCCceeeeeeheecCCCceeeeeeecccCCcHHHHHHH---hccCCHHHHHHHHHHHHHHhhhhhcC-CCCcccccccc
Confidence            689999999999987665  3345566666665544443   33478888999999999999999998 56899999999


Q ss_pred             CC-----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           79 SN-----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        79 ~n-----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      .|           |.|+|+|.......    .....||+.||||
T Consensus       174 DNIFinG~~G~VKIGDLGLAtl~r~s~----aksvIGTPEFMAP  213 (632)
T KOG0584|consen  174 DNIFVNGNLGEVKIGDLGLATLLRKSH----AKSVIGTPEFMAP  213 (632)
T ss_pred             ceEEEcCCcCceeecchhHHHHhhccc----cceeccCccccCh
Confidence            99           58999987654332    2346899999998

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.77  E-value=3.7e-19  Score=110.98  Aligned_cols=108  Identities=17%  Similarity=0.171  Sum_probs=81.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCC-CCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQG-AQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~   79 (111)
                      ++||||++++++|...+...++++++..+++...+.. ......++..+...++.|++.|+.|+|+.   +++||||||+
T Consensus       122 l~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~  198 (478)
T PTZ00267        122 CDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSA  198 (478)
T ss_pred             CCCCCEeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHH
Confidence            5899999999999988877777777776665443321 12233478888999999999999999999   9999999999


Q ss_pred             C----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           80 N----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |          ++|||++.............+..||+.|+||
T Consensus       199 NIll~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aP  240 (478)
T PTZ00267        199 NIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAP  240 (478)
T ss_pred             hEEECCCCcEEEEeCcCceecCCccccccccccCCCccccCH
Confidence            9          3799998765433221113445789999998

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.77  E-value=6.6e-20  Score=115.35  Aligned_cols=103  Identities=26%  Similarity=0.278  Sum_probs=82.6

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCc
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI   81 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~ni   81 (111)
                      +||+||++++.|+..+..+++.+++..|...........  .++.+++..++.|++.++.|||++   +|||||++..||
T Consensus        87 dHP~ivkLl~ayy~enkLwiliEFC~GGAVDaimlEL~r--~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNi  161 (1187)
T KOG0579|consen   87 DHPVIVKLLSAYYFENKLWILIEFCGGGAVDAIMLELGR--VLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNI  161 (1187)
T ss_pred             CChHHHHHHHHHhccCceEEEEeecCCchHhHHHHHhcc--ccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccce
Confidence            699999999988877767777777766655545444433  389999999999999999999999   999999999994


Q ss_pred             ----------CCCcccccCCCCcccccccccCccccccCC
Q 047898           82 ----------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        82 ----------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                .|||++.........  -.++.||++||||
T Consensus       162 L~TldGdirLADFGVSAKn~~t~qk--RDsFIGTPYWMAP  199 (1187)
T KOG0579|consen  162 LLTLDGDIRLADFGVSAKNKSTRQK--RDSFIGTPYWMAP  199 (1187)
T ss_pred             EEEecCcEeeecccccccchhHHhh--hccccCCcccccc
Confidence                      899998655444333  4678999999998

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.77  E-value=4.7e-19  Score=103.70  Aligned_cols=105  Identities=27%  Similarity=0.304  Sum_probs=73.6

Q ss_pred             CCCcc-ceeeeeeeeeCC------ccchhhhhhhhhhcccCcCCCCCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCee
Q 047898            1 LKHEN-LVELLGYCVEGN------LRDELIWIIHVITCKKGVQGAQPS-PVLDWMTRVRIVVDALRGLEYLHEKVQPSII   72 (111)
Q Consensus         1 l~h~~-iv~l~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~   72 (111)
                      |+|+| ||.+.+++.+.+      ....++++++ .++...+...... ..++...+..++.|++.|+.|||++   +|+
T Consensus        67 L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~Il  142 (323)
T KOG0594|consen   67 LSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GIL  142 (323)
T ss_pred             hCCCcceEEEEeeeeecccccccceEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---Cee
Confidence            57889 999999998766      2223444433 1111111111110 2367788999999999999999999   999


Q ss_pred             ecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           73 QRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        73 h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |||+||.|          ++|||+++........  ..+.++|.||.||
T Consensus       143 HRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~--yt~evvTlWYRaP  189 (323)
T KOG0594|consen  143 HRDLKPQNLLISSSGVLKLADFGLARAFSIPMRT--YTPEVVTLWYRAP  189 (323)
T ss_pred             cccCCcceEEECCCCcEeeeccchHHHhcCCccc--ccccEEEeeccCH
Confidence            99999999          4899999855433221  3556789999987

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.77  E-value=5.2e-19  Score=105.57  Aligned_cols=103  Identities=20%  Similarity=0.153  Sum_probs=77.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++.+++...+...++++++..+.+...+.   ....+++.++..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        52 l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~---~~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~N  125 (323)
T cd05571          52 TRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLS---RERVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLEN  125 (323)
T ss_pred             CCCCCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHH
Confidence            579999999999998776666666665554433332   223478899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++........  .....||+.|+||
T Consensus       126 Ill~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aP  164 (323)
T cd05571         126 LMLDKDGHIKITDFGLCKEGISDGAT--MKTFCGTPEYLAP  164 (323)
T ss_pred             EEECCCCCEEEeeCCCCcccccCCCc--ccceecCccccCh
Confidence                      4899988754332221  2345688999998

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.76  E-value=3.9e-20  Score=104.77  Aligned_cols=102  Identities=22%  Similarity=0.282  Sum_probs=76.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      |+|||||++.+.+.+.....++++.|..+++   .......-..++..+..+..|++.++.|+|.+   +|+|||++|+|
T Consensus        67 LqHP~IvrL~~ti~~~~~~ylvFe~m~G~dl---~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~n  140 (355)
T KOG0033|consen   67 LQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPEN  140 (355)
T ss_pred             cCCCcEeehhhhhcccceeEEEEecccchHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhh
Confidence            6899999999999887766666666654432   11111111245566778899999999999999   99999999999


Q ss_pred             -------------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 -------------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 -------------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                   +.|||++..+. .  ......++||+.||||
T Consensus       141 llLASK~~~A~vKL~~FGvAi~l~-~--g~~~~G~~GtP~fmaP  181 (355)
T KOG0033|consen  141 LLLASKAKGAAVKLADFGLAIEVN-D--GEAWHGFAGTPGYLSP  181 (355)
T ss_pred             eeeeeccCCCceeecccceEEEeC-C--ccccccccCCCcccCH
Confidence                         48999998876 2  2225677899999998

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.76  E-value=4.2e-19  Score=109.47  Aligned_cols=103  Identities=18%  Similarity=0.243  Sum_probs=77.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||+++++.-+.....++.+.-+.+++.+....+..  .+.++....|+.||+.++.|+|..   +++|||+||+|
T Consensus        74 VQHpNiVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe~--Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPEN  148 (864)
T KOG4717|consen   74 VQHPNIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHEE--GLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPEN  148 (864)
T ss_pred             hcCcCeeeeeehhcccceEEEEEEecCCchHHHHHHhhhc--cccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcce
Confidence            5899999999998775444333333334444433333322  388889999999999999999999   99999999999


Q ss_pred             -----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 -----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 -----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                 +.|||++..+....+   ..+.+|+..|-||
T Consensus       149 VVFFEKlGlVKLTDFGFSNkf~PG~k---L~TsCGSLAYSAP  187 (864)
T KOG4717|consen  149 VVFFEKLGLVKLTDFGFSNKFQPGKK---LTTSCGSLAYSAP  187 (864)
T ss_pred             eEEeeecCceEeeeccccccCCCcch---hhcccchhhccCc
Confidence                       389999877655433   4667888888887

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=9.3e-19  Score=104.05  Aligned_cols=103  Identities=21%  Similarity=0.191  Sum_probs=78.1

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+...++.+++..+.+...+..   ...+++.++..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        50 l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~N  123 (312)
T cd05585          50 VNCPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQR---EGRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPEN  123 (312)
T ss_pred             CCCCcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHH
Confidence            5799999999999887766666666665554443332   23488899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++........  .....||+.|+||
T Consensus       124 ili~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aP  162 (312)
T cd05585         124 ILLDYQGHIALCDFGLCKLNMKDDDK--TNTFCGTPEYLAP  162 (312)
T ss_pred             eEECCCCcEEEEECcccccCccCCCc--cccccCCcccCCH
Confidence                      4799988754332221  2345688999987

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.75  E-value=1.3e-18  Score=103.94  Aligned_cols=103  Identities=22%  Similarity=0.189  Sum_probs=77.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||++++++|...+...++.+++..+.+...+.   ....+++.++..++.|++.|+.|+|++   +++|+|++|+|
T Consensus        52 l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~---~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~N  125 (323)
T cd05595          52 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLS---RERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLEN  125 (323)
T ss_pred             CCCCCCcceeeEEecCCEEEEEEeCCCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHH
Confidence            579999999999998776666666666555433332   223488899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++........  .....|+..|+||
T Consensus       126 Ill~~~~~~kL~Dfg~~~~~~~~~~~--~~~~~gt~~y~aP  164 (323)
T cd05595         126 LMLDKDGHIKITDFGLCKEGISDGAT--MKTFCGTPEYLAP  164 (323)
T ss_pred             EEEcCCCCEEecccHHhccccCCCCc--cccccCCcCcCCc
Confidence                      4899987654332211  2345688899988

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.75  E-value=2.3e-19  Score=108.66  Aligned_cols=107  Identities=29%  Similarity=0.429  Sum_probs=79.3

Q ss_pred             CCCccceeeeeeeeeCCccc----hhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcC------CCC
Q 047898            1 LKHENLVELLGYCVEGNLRD----ELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKV------QPS   70 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~------~~~   70 (111)
                      ++|+||+++++.-..+....    ++.++-+.+++-+.+    .....+|....+++..++.|++|||...      ++.
T Consensus       261 m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL~dyL----~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~  336 (534)
T KOG3653|consen  261 MKHENILQFIGAEKRGTADRMEYWLVTEFHPKGSLCDYL----KANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPP  336 (534)
T ss_pred             ccchhHHHhhchhccCCccccceeEEeeeccCCcHHHHH----HhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCc
Confidence            68999999999887665332    233333344433333    3444899999999999999999999643      568


Q ss_pred             eeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           71 IIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        71 i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |+|||+|+.|          |+|||++..+............+||.+||||
T Consensus       337 IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAP  387 (534)
T KOG3653|consen  337 IAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAP  387 (534)
T ss_pred             cccccccccceEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCH
Confidence            9999999999          5899999877654333334457999999998

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.75  E-value=6.5e-19  Score=102.10  Aligned_cols=103  Identities=17%  Similarity=0.181  Sum_probs=76.3

Q ss_pred             CCccceeeeeeeeeCCc----cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCC
Q 047898            2 KHENLVELLGYCVEGNL----RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIR   77 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~   77 (111)
                      .|||||.++++|.+.-.    ..++.+.|+.+.+-..... ++...+++.++..++.||..|+.|||+.   +|.|||+|
T Consensus       113 ~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~-~g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlK  188 (400)
T KOG0604|consen  113 GHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQD-RGDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLK  188 (400)
T ss_pred             CCCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHH-cccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCC
Confidence            48999999999986322    1223344455544333332 2344499999999999999999999999   99999999


Q ss_pred             CCC-------------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           78 SSN-------------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        78 ~~n-------------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |+|             +.|||+++.-.....   ..+.+.|++|.||
T Consensus       189 pENLLyt~t~~na~lKLtDfGFAK~t~~~~~---L~TPc~TPyYvaP  232 (400)
T KOG0604|consen  189 PENLLYTTTSPNAPLKLTDFGFAKETQEPGD---LMTPCFTPYYVAP  232 (400)
T ss_pred             hhheeeecCCCCcceEecccccccccCCCcc---ccCCcccccccCH
Confidence            999             489999986543222   4566789999887

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.75  E-value=1.1e-18  Score=102.57  Aligned_cols=105  Identities=26%  Similarity=0.383  Sum_probs=76.2

Q ss_pred             CCCccceeeeeeeeeCCc--cchhhhhhh--hhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCC
Q 047898            1 LKHENLVELLGYCVEGNL--RDELIWIIH--VITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDI   76 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l   76 (111)
                      ++|+||+.+.+++..+..  ...+|.+.+  ..++...+.   .+..++......+..|++.|+.|+|+.   +++|||+
T Consensus        78 ~~HeNIi~l~di~~p~~~~~f~DvYiV~elMetDL~~iik---~~~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDL  151 (359)
T KOG0660|consen   78 LRHENIIGLLDIFRPPSRDKFNDVYLVFELMETDLHQIIK---SQQDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDL  151 (359)
T ss_pred             hcCCCcceEEeecccccccccceeEEehhHHhhHHHHHHH---cCccccHHHHHHHHHHHHHhcchhhcc---ccccccc
Confidence            589999999999986221  222333332  344444433   233388888899999999999999999   9999999


Q ss_pred             CCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           77 RSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        77 ~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      ||.|          |.|||++|...........+..+.|.||.||
T Consensus       152 KPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAP  196 (359)
T KOG0660|consen  152 KPSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAP  196 (359)
T ss_pred             chhheeeccCCCEEeccccceeeccccCcccchhcceeeeeecCH
Confidence            9999          5999999987543111113556889999998

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.75  E-value=1e-18  Score=105.04  Aligned_cols=100  Identities=18%  Similarity=0.201  Sum_probs=78.1

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.+.+...++++++..+.+...+..   ...++...+..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        88 l~hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~N  161 (340)
T PTZ00426         88 INHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRR---NKRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPEN  161 (340)
T ss_pred             CCCCCCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHH
Confidence            5799999999999987766666676665555444432   23488899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||++......     ..+..||+.||||
T Consensus       162 ILl~~~~~ikL~DFG~a~~~~~~-----~~~~~gt~~y~aP  197 (340)
T PTZ00426        162 LLLDKDGFIKMTDFGFAKVVDTR-----TYTLCGTPEYIAP  197 (340)
T ss_pred             EEECCCCCEEEecCCCCeecCCC-----cceecCChhhcCH
Confidence                      4899988765322     2345688889987

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.75  E-value=2.9e-18  Score=102.44  Aligned_cols=103  Identities=21%  Similarity=0.182  Sum_probs=77.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHE-KVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~-~~~~~i~h~~l~~~   79 (111)
                      ++||||+++.+++...+...++++++..+.+...+.   ....+++.++..++.|++.|+.|+|+ .   +++|+|++|+
T Consensus        52 ~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~---~~~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~  125 (325)
T cd05594          52 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLS---RERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLE  125 (325)
T ss_pred             CCCCCCCceEEEEEcCCEEEEEEeCCCCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCC
Confidence            479999999999988776666666666554433332   22348899999999999999999997 7   9999999999


Q ss_pred             C----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           80 N----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |          ++|||+++........  .....|+..|+||
T Consensus       126 NIll~~~~~~kL~Dfg~~~~~~~~~~~--~~~~~gt~~y~aP  165 (325)
T cd05594         126 NLMLDKDGHIKITDFGLCKEGIKDGAT--MKTFCGTPEYLAP  165 (325)
T ss_pred             eEEECCCCCEEEecCCCCeecCCCCcc--cccccCCcccCCH
Confidence            9          4899987654332221  2345688899987

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.75  E-value=1.8e-18  Score=103.36  Aligned_cols=103  Identities=22%  Similarity=0.199  Sum_probs=77.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++...+...++.+++..+.+...+..   ...++..+...++.|++.|+.|+|+.   +++|+|++++|
T Consensus        53 ~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~N  126 (325)
T cd05602          53 VKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQR---ERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPEN  126 (325)
T ss_pred             CCCCCCCceeEEEEcCCeEEEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHH
Confidence            4799999999999887766666666665544433322   23377788888999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++........  .....|++.|+||
T Consensus       127 ili~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aP  165 (325)
T cd05602         127 ILLDSQGHIVLTDFGLCKENIEHNGT--TSTFCGTPEYLAP  165 (325)
T ss_pred             eEECCCCCEEEccCCCCcccccCCCC--cccccCCccccCH
Confidence                      4899988754332221  2345688999987

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.75  E-value=1.6e-18  Score=103.55  Aligned_cols=103  Identities=22%  Similarity=0.205  Sum_probs=77.5

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+...++.+++..+.+...+.   ....+++.++..++.|++.|+.|+|+.   +++|+|++++|
T Consensus        53 ~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~---~~~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~N  126 (325)
T cd05604          53 VKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQ---RERSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPEN  126 (325)
T ss_pred             CCCCCCccEEEEEecCCEEEEEEcCCCCCCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHH
Confidence            579999999999988776666666666554433322   233488899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++........  .....|+..|+||
T Consensus       127 Ill~~~~~~kL~DfG~~~~~~~~~~~--~~~~~gt~~y~aP  165 (325)
T cd05604         127 ILLDSQGHVVLTDFGLCKEGIAQSDT--TTTFCGTPEYLAP  165 (325)
T ss_pred             eEECCCCCEEEeecCCcccCCCCCCC--cccccCChhhCCH
Confidence                      4799988754332221  2345688899987

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.75  E-value=2.1e-18  Score=103.21  Aligned_cols=103  Identities=22%  Similarity=0.192  Sum_probs=77.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++.+++...+...++++++..+.+...+.   ....+++.++..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        52 l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~---~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~N  125 (328)
T cd05593          52 TRHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLS---RERVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLEN  125 (328)
T ss_pred             CCCCCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHH
Confidence            479999999999998776666666666554433322   223488999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++........  .....||+.|+||
T Consensus       126 Ill~~~~~~kL~DfG~~~~~~~~~~~--~~~~~gt~~y~aP  164 (328)
T cd05593         126 LMLDKDGHIKITDFGLCKEGITDAAT--MKTFCGTPEYLAP  164 (328)
T ss_pred             eEECCCCcEEEecCcCCccCCCcccc--cccccCCcCccCh
Confidence                      3799988754332221  2345688899988

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.74  E-value=1.7e-18  Score=108.92  Aligned_cols=105  Identities=23%  Similarity=0.284  Sum_probs=84.9

Q ss_pred             CCCccceeeeeeeeeCC------ccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeec
Q 047898            1 LKHENLVELLGYCVEGN------LRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQR   74 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~   74 (111)
                      |+|+|||+++++=.+..      ....+.+++..+++...+..-.....+++.+...+...+..|+.|||.+   +|+||
T Consensus        68 Lnh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHR  144 (732)
T KOG4250|consen   68 LNHPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHR  144 (732)
T ss_pred             cCchhhhhhcccCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---Cceec
Confidence            57999999999876544      1223445556666666776666777799999999999999999999999   99999


Q ss_pred             CCCCCCc--------------CCCcccccCCCCcccccccccCccccccCC
Q 047898           75 DIRSSNI--------------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        75 ~l~~~ni--------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      ||||.||              .|||.|+.+..+..   ..+..||..|++|
T Consensus       145 DlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s~---~~S~vGT~~YLhP  192 (732)
T KOG4250|consen  145 DLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNSL---FTSLVGTEEYLHP  192 (732)
T ss_pred             cCCCCcEEEeecCCCceEEeeecccccccCCCCCe---eeeecCchhhcCh
Confidence            9999993              89999997765543   4678899999998

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.74  E-value=2.1e-18  Score=102.89  Aligned_cols=103  Identities=22%  Similarity=0.202  Sum_probs=76.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.+.+...++++++..+.+...+.   ....++..++..++.|++.|+.|+|+.   +++|+||+|+|
T Consensus        53 ~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~---~~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~N  126 (321)
T cd05603          53 LKHPFLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQ---RERCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPEN  126 (321)
T ss_pred             CCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHH
Confidence            579999999999988776666666666554433222   223478888889999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                +.|||+++........  .....|++.|+||
T Consensus       127 Ill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aP  165 (321)
T cd05603         127 ILLDSQGHVVLTDFGLCKEGVEPEET--TSTFCGTPEYLAP  165 (321)
T ss_pred             eEECCCCCEEEccCCCCccCCCCCCc--cccccCCcccCCH
Confidence                      4899987653322211  2345688889987

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.74  E-value=1.8e-18  Score=103.58  Aligned_cols=102  Identities=23%  Similarity=0.217  Sum_probs=78.0

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +||||+++++++...+...++++++..+.+...+..   ...++...+..++.|++.|+.|+|++   +++|+|++|+| 
T Consensus        54 ~hp~iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~---~~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Ni  127 (329)
T cd05618          54 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNV  127 (329)
T ss_pred             CCCcCCceeeEEEeCCEEEEEEeCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHE
Confidence            799999999999987766667777765554333322   23488999999999999999999999   99999999999 


Q ss_pred             ---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                               ++|||+++........  .....||..|+||
T Consensus       128 li~~~~~~kL~DfG~~~~~~~~~~~--~~~~~gt~~y~aP  165 (329)
T cd05618         128 LLDSEGHIKLTDYGMCKEGLRPGDT--TSTFCGTPNYIAP  165 (329)
T ss_pred             EECCCCCEEEeeCCccccccCCCCc--cccccCCccccCH
Confidence                     4799988754322221  2345688889987

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.74  E-value=2.4e-18  Score=102.47  Aligned_cols=102  Identities=25%  Similarity=0.289  Sum_probs=77.4

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +||||+++++++...+...++++++..+.+...+..   ...++..++..++.|++.|+.|+|+.   +++|+|++++| 
T Consensus        54 ~hp~i~~~~~~~~~~~~~~lv~e~~~gg~L~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Ni  127 (316)
T cd05592          54 EHPFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQS---SGRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNV  127 (316)
T ss_pred             CCCCccceeeEEEcCCEEEEEEcCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHe
Confidence            799999999999887766666666665554333322   23388889999999999999999999   99999999999 


Q ss_pred             ---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                               ++|||+++........  .....||..|+||
T Consensus       128 ll~~~~~~kL~Dfg~a~~~~~~~~~--~~~~~gt~~y~aP  165 (316)
T cd05592         128 LLDKDGHIKIADFGMCKENMNGEGK--ASTFCGTPDYIAP  165 (316)
T ss_pred             EECCCCCEEEccCcCCeECCCCCCc--cccccCCccccCH
Confidence                     3799988754332221  3345688999987

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.74  E-value=2.9e-18  Score=102.39  Aligned_cols=103  Identities=22%  Similarity=0.211  Sum_probs=77.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+...++.+++..+.+...+..   ...+++.++..++.|++.|+.|+|++   +++|+|++++|
T Consensus        53 l~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~N  126 (323)
T cd05575          53 VKHPFLVGLHYSFQTADKLYFVLDYVNGGELFFHLQR---ERSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPEN  126 (323)
T ss_pred             CCCCCCCCeeEEEEeCCEEEEEEcCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHH
Confidence            5799999999999887766666666655544333322   23478888999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++........  .....|++.|+||
T Consensus       127 Ill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aP  165 (323)
T cd05575         127 ILLDSQGHVVLTDFGLCKEGIEHSKT--TSTFCGTPEYLAP  165 (323)
T ss_pred             eEECCCCcEEEeccCCCcccccCCCc--cccccCChhhcCh
Confidence                      3799987654322221  2345688899987

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.73  E-value=3e-18  Score=102.53  Aligned_cols=102  Identities=22%  Similarity=0.208  Sum_probs=77.2

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +||||+++++++...+...++++++..+.+...+..   ...+++..+..++.|++.|+.|+|++   +++|+|++|+| 
T Consensus        54 ~hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~---~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Ni  127 (329)
T cd05588          54 NHPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQR---QRKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNV  127 (329)
T ss_pred             CCCCCCceEEEEEcCCEEEEEEeCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHe
Confidence            699999999999987766666666665544333322   23489999999999999999999999   99999999999 


Q ss_pred             ---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                               ++|||+++........  .....||..|+||
T Consensus       128 li~~~~~~kL~Dfg~~~~~~~~~~~--~~~~~gt~~y~aP  165 (329)
T cd05588         128 LLDAEGHIKLTDYGMCKEGIRPGDT--TSTFCGTPNYIAP  165 (329)
T ss_pred             EECCCCCEEECcCccccccccCCCc--cccccCCccccCH
Confidence                     4899988643322221  2345688899987

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.73  E-value=3.1e-18  Score=102.05  Aligned_cols=103  Identities=19%  Similarity=0.212  Sum_probs=77.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+....+++++..+.+...+.   ....+++..+..++.|++.|+.|+|++   +++|+|++++|
T Consensus        55 l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~---~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~N  128 (318)
T cd05582          55 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLS---KEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPEN  128 (318)
T ss_pred             CCCCCcccEEEEEEcCCEEEEEEcCCCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHH
Confidence            579999999999998776666666665554433332   223488999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||++.........  .....|+..|+||
T Consensus       129 il~~~~~~~kL~Dfg~~~~~~~~~~~--~~~~~g~~~y~aP  167 (318)
T cd05582         129 ILLDEEGHIKLTDFGLSKESIDHEKK--AYSFCGTVEYMAP  167 (318)
T ss_pred             eEECCCCcEEEeeccCCcccCCCCCc--eecccCChhhcCH
Confidence                      4799988755433221  2345678888887

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.73  E-value=3.3e-18  Score=102.07  Aligned_cols=102  Identities=23%  Similarity=0.233  Sum_probs=77.6

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +||||+++++++...+...++++++..+.+...+..   ...++..++..++.|++.|+.|+|+.   +++|+|++|+| 
T Consensus        54 ~h~~iv~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~---~~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NI  127 (320)
T cd05590          54 NHPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQK---SRRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNV  127 (320)
T ss_pred             CCCchhceeeEEEcCCEEEEEEcCCCCchHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHe
Confidence            699999999999987766666666665555433322   23388899999999999999999999   99999999999 


Q ss_pred             ---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                               ++|||+++........  .....||+.|+||
T Consensus       128 li~~~~~~kL~DfG~~~~~~~~~~~--~~~~~gt~~y~aP  165 (320)
T cd05590         128 LLDHEGHCKLADFGMCKEGIFNGKT--TSTFCGTPDYIAP  165 (320)
T ss_pred             EECCCCcEEEeeCCCCeecCcCCCc--ccccccCccccCH
Confidence                     4799987654322221  3345688999987

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.73  E-value=3.6e-18  Score=101.99  Aligned_cols=103  Identities=22%  Similarity=0.267  Sum_probs=76.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+....+++++..+.+...+.   ....++...+..++.|++.|+.|+|+.   +++|+|++++|
T Consensus        57 l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~N  130 (323)
T cd05584          57 VKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMHLE---REGIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPEN  130 (323)
T ss_pred             CCCCchhceeeEEecCCeEEEEEeCCCCchHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHH
Confidence            589999999999988765555656655544433332   223377888888999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++........  .....|++.|+||
T Consensus       131 il~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aP  169 (323)
T cd05584         131 ILLDAQGHVKLTDFGLCKESIHEGTV--THTFCGTIEYMAP  169 (323)
T ss_pred             eEECCCCCEEEeeCcCCeecccCCCc--ccccCCCccccCh
Confidence                      4899987654332221  2345688899988

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.73  E-value=6.7e-18  Score=100.85  Aligned_cols=102  Identities=25%  Similarity=0.315  Sum_probs=77.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++..++....+.+++..+.+.....    ...+++.+...++.|++.|+.|+|+.   +++|+|++++|
T Consensus        59 l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~~~----~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~N  131 (324)
T cd05589          59 ERHPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHIH----TDVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDN  131 (324)
T ss_pred             cCCCChhceeeEEEcCCEEEEEEcCCCCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHH
Confidence            469999999999998776666666665554432221    22388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++........  .....|+..||||
T Consensus       132 ill~~~~~~kL~Dfg~~~~~~~~~~~--~~~~~g~~~y~aP  170 (324)
T cd05589         132 LLLDTEGFVKIADFGLCKEGMGFGDR--TSTFCGTPEFLAP  170 (324)
T ss_pred             eEECCCCcEEeCcccCCccCCCCCCc--ccccccCccccCH
Confidence                      4799987654332221  2345688899987

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.73  E-value=7e-18  Score=104.73  Aligned_cols=105  Identities=23%  Similarity=0.290  Sum_probs=75.3

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      |+|+|||++++++...+...++++++. +.+...+..  ....+++.++..++.|++.|+.|+|+.   +++|+|||++|
T Consensus       217 L~HpnIv~l~~~~~~~~~~~lv~e~~~-~~L~~~l~~--~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~N  290 (461)
T PHA03211        217 LSHPAVLALLDVRVVGGLTCLVLPKYR-SDLYTYLGA--RLRPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTEN  290 (461)
T ss_pred             CCCCCCCcEEEEEEECCEEEEEEEccC-CCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHH
Confidence            589999999999988765555544432 222222211  122488999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++...............||..|+||
T Consensus       291 ILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~AP  331 (461)
T PHA03211        291 VLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAP  331 (461)
T ss_pred             EEECCCCCEEEcccCCceecccccccccccccCCCcCCcCH
Confidence                      4899998765433221112345689999987

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.73  E-value=6.8e-18  Score=99.93  Aligned_cols=108  Identities=20%  Similarity=0.307  Sum_probs=75.5

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCC----------------CCCCCCCHHHHHHHHHHHHHHHHHhh
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGA----------------QPSPVLDWMTRVRIVVDALRGLEYLH   64 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~l~~~~~~~~~~~i~~~l~~lh   64 (111)
                      ++||||+++++++...+....+.+++..+.+...+...                .....+++.+...++.|++.|+.|+|
T Consensus        76 l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH  155 (304)
T cd05096          76 LKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLS  155 (304)
T ss_pred             cCCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH
Confidence            57999999999998876666666666544433222110                11123678888999999999999999


Q ss_pred             hcCCCCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           65 EKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        65 ~~~~~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +.   +++|+|++|+|          ++|||.++...............++..|+||
T Consensus       156 ~~---~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aP  209 (304)
T cd05096         156 SL---NFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAW  209 (304)
T ss_pred             HC---CccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCH
Confidence            99   99999999999          4899988765433221112233456778876

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.73  E-value=5.5e-18  Score=101.41  Aligned_cols=102  Identities=20%  Similarity=0.126  Sum_probs=77.0

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +||||+.+++++.......++.+++..+.+...+.   ....++..++..++.|++.|+.|+|++   +++|+|++|+| 
T Consensus        54 ~~p~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~---~~~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Ni  127 (330)
T cd05586          54 ESPFIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQ---KEGRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENI  127 (330)
T ss_pred             CCCcCcceEEEEecCCeEEEEEcCCCCChHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHe
Confidence            69999999999988776666666665554433332   223488899999999999999999999   99999999999 


Q ss_pred             ---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                               ++|||+++........  .....||..|+||
T Consensus       128 li~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aP  165 (330)
T cd05586         128 LLDATGHIALCDFGLSKANLTDNKT--TNTFCGTTEYLAP  165 (330)
T ss_pred             EECCCCCEEEecCCcCcCCCCCCCC--ccCccCCccccCH
Confidence                     4899988654332221  2345688899987

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.73  E-value=4.9e-18  Score=101.19  Aligned_cols=103  Identities=23%  Similarity=0.255  Sum_probs=77.3

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.+.+...++++++..+++...+..   ...++..+...++.|++.|+.|+|+.   +++|+|++++|
T Consensus        53 ~~hp~iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~N  126 (316)
T cd05619          53 WEHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQS---CHKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDN  126 (316)
T ss_pred             cCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHH
Confidence            3799999999999987766666666665555443322   23378889999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||++.........  .....||..|+||
T Consensus       127 il~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aP  165 (316)
T cd05619         127 ILLDTDGHIKIADFGMCKENMLGDAK--TCTFCGTPDYIAP  165 (316)
T ss_pred             EEECCCCCEEEccCCcceECCCCCCc--eeeecCCccccCH
Confidence                      4899987643222211  2345688899987

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.72  E-value=2.4e-18  Score=109.70  Aligned_cols=105  Identities=18%  Similarity=0.290  Sum_probs=89.3

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||++|-|+.....+..++.|+|+++.+..++...+++  +++.|...+...|+.||.||.+.   +.+|||+-.+|
T Consensus       687 FdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGq--ftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARN  761 (996)
T KOG0196|consen  687 FDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQ--FTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARN  761 (996)
T ss_pred             CCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCc--eEeehHHHHHHHHHHHhHHHhhc---Cchhhhhhhhh
Confidence            58999999999999999889999999999999999877655  99999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCc--cccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLG--TFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~--~~~~~aP  111 (111)
                                ++|||++|.+.++... ..++..|  +++|.||
T Consensus       762 ILVNsnLvCKVsDFGLSRvledd~~~-~ytt~GGKIPiRWTAP  803 (996)
T KOG0196|consen  762 ILVNSNLVCKVSDFGLSRVLEDDPEA-AYTTLGGKIPIRWTAP  803 (996)
T ss_pred             eeeccceEEEeccccceeecccCCCc-cccccCCccceeecCh
Confidence                      4999999977665532 1233333  4678887

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.72  E-value=2.1e-18  Score=106.92  Aligned_cols=102  Identities=22%  Similarity=0.196  Sum_probs=77.3

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      |+|||||+++.+.........+.+|...+...+.   ..............++.|+.++++|||++   .++|||++.+|
T Consensus       112 l~HPnIvkl~~v~~t~~~lylV~eya~~ge~~~y---l~~~gr~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eN  185 (596)
T KOG0586|consen  112 LNHPNIVKLFSVIETEATLYLVMEYASGGELFDY---LVKHGRMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAEN  185 (596)
T ss_pred             cCCcceeeeeeeeeecceeEEEEEeccCchhHHH---HHhcccchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhh
Confidence            6899999999999985544444444444433333   33333355577888899999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                |+|||++..+....   ...+++|++.|.||
T Consensus       186 ilL~~~mnikIaDfgfS~~~~~~~---~lqt~cgsppyAaP  223 (596)
T KOG0586|consen  186 ILLDENMNIKIADFGFSTFFDYGL---MLQTFCGSPPYAAP  223 (596)
T ss_pred             cccccccceeeeccccceeecccc---cccccCCCCCccCh
Confidence                      58999998765332   25788999999987

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.72  E-value=4.6e-18  Score=101.43  Aligned_cols=102  Identities=23%  Similarity=0.206  Sum_probs=76.9

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +||||+++++++...+...++++++..+.+...+.   ....+++..+..++.|++.|+.|+|+.   +++|+|++|+| 
T Consensus        54 ~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~---~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Ni  127 (321)
T cd05591          54 KHPFLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQ---RSRKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNI  127 (321)
T ss_pred             CCCCccceeeEEEcCCeEEEEEeCCCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHe
Confidence            69999999999998776666666666554433332   223378888999999999999999999   99999999999 


Q ss_pred             ---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                               ++|||++.........  .....|+..|+||
T Consensus       128 ll~~~~~~kL~Dfg~~~~~~~~~~~--~~~~~gt~~y~aP  165 (321)
T cd05591         128 LLDAEGHCKLADFGMCKEGILNGVT--TTTFCGTPDYIAP  165 (321)
T ss_pred             EECCCCCEEEeecccceecccCCcc--ccccccCccccCH
Confidence                     4799987654332221  2345688889987

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.72  E-value=8.9e-18  Score=102.62  Aligned_cols=103  Identities=22%  Similarity=0.319  Sum_probs=72.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++........+.+++. +.+...+   .....+++.++..++.|++.|+.|+|++   +++|+|+||+|
T Consensus       140 l~HpnIv~~~~~~~~~~~~~lv~e~~~-~~L~~~l---~~~~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~N  212 (391)
T PHA03212        140 INHPSIIQLKGTFTYNKFTCLILPRYK-TDLYCYL---AAKRNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAEN  212 (391)
T ss_pred             CCCCCCCCEeEEEEECCeeEEEEecCC-CCHHHHH---HhcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHh
Confidence            689999999999987664444433332 2221111   1223378889999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||++......... ......||+.|+||
T Consensus       213 Ill~~~~~vkL~DFG~a~~~~~~~~~-~~~~~~gt~~y~aP  252 (391)
T PHA03212        213 IFINHPGDVCLGDFGAACFPVDINAN-KYYGWAGTIATNAP  252 (391)
T ss_pred             EEEcCCCCEEEEeCCccccccccccc-ccccccCccCCCCh
Confidence                      4899988653322111 12345788999988

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.72  E-value=4.5e-18  Score=101.82  Aligned_cols=100  Identities=23%  Similarity=0.297  Sum_probs=76.5

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+...++.+++..+.+...+..   ...++...+..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        75 l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~N  148 (329)
T PTZ00263         75 LSHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRK---AGRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPEN  148 (329)
T ss_pred             CCCCCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHH
Confidence            5799999999999987766666666655554433332   23378888888999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++......     ....|++.|+||
T Consensus       149 Ill~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aP  184 (329)
T PTZ00263        149 LLLDNKGHVKVTDFGFAKKVPDRT-----FTLCGTPEYLAP  184 (329)
T ss_pred             EEECCCCCEEEeeccCceEcCCCc-----ceecCChhhcCH
Confidence                      47999887553321     234678889887

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.72  E-value=5.7e-18  Score=102.81  Aligned_cols=103  Identities=15%  Similarity=0.145  Sum_probs=78.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.+.....++.+++..+.+...+..    ..++..++..++.|++.|+.|+|+.   +++|||++|+|
T Consensus       100 ~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~----~~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~N  172 (370)
T cd05621         100 ANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSN----YDVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDN  172 (370)
T ss_pred             CCCCCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHH
Confidence            4799999999999987766666666665555444321    2378888999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||++......... ...+..||+.|+||
T Consensus       173 ILl~~~~~~kL~DFG~a~~~~~~~~~-~~~~~~gt~~Y~aP  212 (370)
T cd05621         173 MLLDKHGHLKLADFGTCMKMDETGMV-RCDTAVGTPDYISP  212 (370)
T ss_pred             EEECCCCCEEEEecccceecccCCce-ecccCCCCcccCCH
Confidence                      4899998765432211 12345789999997

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.72  E-value=6e-18  Score=102.59  Aligned_cols=99  Identities=21%  Similarity=0.298  Sum_probs=79.4

Q ss_pred             CccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC--
Q 047898            3 HENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN--   80 (111)
Q Consensus         3 h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n--   80 (111)
                      |||||++.++|++.....++.+.+..+.+.+.....    .+++..+..++.|++.++.|+|+.   +++|||+||+|  
T Consensus        95 hpniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L  167 (382)
T KOG0032|consen   95 HPNIVQLKDAFEDPDSVYLVMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLL  167 (382)
T ss_pred             CCCEEEEEEEEEcCCeEEEEEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHee
Confidence            999999999999877555555665555544433332    288999999999999999999999   99999999999  


Q ss_pred             ------------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ------------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ------------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                  ++|||++..... ...  ....+||+.|+||
T Consensus       168 ~~~~~~~~~~ik~~DFGla~~~~~-~~~--~~~~~Gtp~y~AP  207 (382)
T KOG0032|consen  168 LASKDEGSGRIKLIDFGLAKFIKP-GER--LHTIVGTPEYVAP  207 (382)
T ss_pred             eccccCCCCcEEEeeCCCceEccC-Cce--EeeecCCccccCc
Confidence                        379999987765 222  5667999999998

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.72  E-value=9.3e-18  Score=99.98  Aligned_cols=102  Identities=24%  Similarity=0.258  Sum_probs=75.8

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +||||+++++++...+...++++++..+.+...+.   ....++..++..++.|++.|+.|+|+.   +++|+|++|+| 
T Consensus        54 ~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Ni  127 (316)
T cd05620          54 ENPFLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQ---DKGRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNV  127 (316)
T ss_pred             CCCCccCeeEEEEeCCEEEEEECCCCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHe
Confidence            79999999999998776556666665544433322   223478889999999999999999999   99999999999 


Q ss_pred             ---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                               ++|||+++........  .....|+..|+||
T Consensus       128 l~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aP  165 (316)
T cd05620         128 MLDRDGHIKIADFGMCKENVFGDNR--ASTFCGTPDYIAP  165 (316)
T ss_pred             EECCCCCEEeCccCCCeecccCCCc--eeccCCCcCccCH
Confidence                     4899987643222211  2345688899987

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.72  E-value=1.5e-17  Score=98.99  Aligned_cols=105  Identities=18%  Similarity=0.290  Sum_probs=74.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||++++++|.... ...+.+++..+.+.+.+...  ...+++.....++.|++.|+.|+|++   +++|+|++++|
T Consensus        66 l~h~niv~~~g~~~~~~-~~~v~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~N  139 (316)
T cd05108          66 VDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARN  139 (316)
T ss_pred             CCCCCCCeEEEEEcCCC-ceeeeecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHHhc---Ceeccccchhh
Confidence            57999999999998654 34455555555554444322  22378888899999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.++...............++..|+||
T Consensus       140 ill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~ap  180 (316)
T cd05108         140 VLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMAL  180 (316)
T ss_pred             eEecCCCcEEEccccccccccCCCcceeccCCccceeecCh
Confidence                      4899998866543322111222345668876

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.72  E-value=2.4e-17  Score=95.89  Aligned_cols=76  Identities=20%  Similarity=0.278  Sum_probs=59.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++........+.+++..+.+.......  ...+++.....++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        61 l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~N  135 (262)
T cd05077          61 VSHKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRK--SDVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKN  135 (262)
T ss_pred             CCCCCEeeEEEEEecCCCCEEEEecccCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCccc
Confidence            58999999999998876666666666655443333221  22378888999999999999999999   99999999999


Q ss_pred             c
Q 047898           81 I   81 (111)
Q Consensus        81 i   81 (111)
                      |
T Consensus       136 i  136 (262)
T cd05077         136 I  136 (262)
T ss_pred             E
Confidence            3

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.71  E-value=5.6e-18  Score=112.33  Aligned_cols=105  Identities=30%  Similarity=0.365  Sum_probs=82.3

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      |+|||+|+++|+=.+++...++.++++.|.+...+...   ...++.....+..|++.|+.|||.+   +|+|||+|++|
T Consensus      1291 lnHpNlV~YyGVEvHRekv~IFMEyC~~GsLa~ll~~g---ri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aN 1364 (1509)
T KOG4645|consen 1291 LNHPNLVRYYGVEVHREKVYIFMEYCEGGSLASLLEHG---RIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPAN 1364 (1509)
T ss_pred             ccCccccccCceeecHHHHHHHHHHhccCcHHHHHHhc---chhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccc
Confidence            68999999999999877666777777777665554332   2256666667788999999999999   99999999999


Q ss_pred             c----------CCCcccccCCCCcccc--cccccCccccccCC
Q 047898           81 I----------ADFNLSNQAPNMAARL--HSTRVLGTFSYHAP  111 (111)
Q Consensus        81 i----------~~~g~~~~~~~~~~~~--~~~~~~~~~~~~aP  111 (111)
                      |          .|||.+..+.+..+..  ..+...||+-||||
T Consensus      1365 I~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAP 1407 (1509)
T KOG4645|consen 1365 ILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAP 1407 (1509)
T ss_pred             eeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCc
Confidence            4          7999998776654222  14567899999998

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.71  E-value=2e-17  Score=99.23  Aligned_cols=65  Identities=23%  Similarity=0.370  Sum_probs=49.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           44 LDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        44 l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +++.+...++.|++.|+.|+|+.   +++|+|+||+|          ++|||+++...............++..|+||
T Consensus       171 l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aP  245 (338)
T cd05102         171 LTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAP  245 (338)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCc
Confidence            77788889999999999999999   99999999999          3899998765433222112233456778887

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.71  E-value=9.9e-18  Score=100.27  Aligned_cols=102  Identities=21%  Similarity=0.198  Sum_probs=76.9

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +|+||+.+++++...+...++++++..+.+...+.   ....+++.++..++.|++.|+.|+|+.   +++|+|++|+| 
T Consensus        54 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~---~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Ni  127 (327)
T cd05617          54 SNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQ---RQRKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNV  127 (327)
T ss_pred             CCCCEeeEEEEEEeCCEEEEEEeCCCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHE
Confidence            68999999999988776666666666554433332   223488999999999999999999999   99999999999 


Q ss_pred             ---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                               ++|||++.........  .....||..|+||
T Consensus       128 li~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aP  165 (327)
T cd05617         128 LLDADGHIKLTDYGMCKEGLGPGDT--TSTFCGTPNYIAP  165 (327)
T ss_pred             EEeCCCCEEEeccccceeccCCCCc--eecccCCcccCCH
Confidence                     4899988643322211  2345688899987

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.71  E-value=1.1e-17  Score=101.26  Aligned_cols=84  Identities=13%  Similarity=0.115  Sum_probs=67.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++.+.+.....++++++..+.+...+..   ...++..++..++.|++.|+.|+|++   +++|||++|+|
T Consensus        58 ~~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~N  131 (363)
T cd05628          58 ADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMK---KDTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDN  131 (363)
T ss_pred             CCCCCcceEEEEEecCCeEEEEEcCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHH
Confidence            4799999999999987766666676665555444432   23488999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccC
Q 047898           81 ----------IADFNLSNQA   90 (111)
Q Consensus        81 ----------i~~~g~~~~~   90 (111)
                                ++|||+++..
T Consensus       132 ILi~~~~~vkL~DFGla~~~  151 (363)
T cd05628         132 LLLDSKGHVKLSDFGLCTGL  151 (363)
T ss_pred             eEECCCCCEEEeeccCcccc
Confidence                      4799988654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.71  E-value=1.3e-17  Score=98.00  Aligned_cols=104  Identities=23%  Similarity=0.259  Sum_probs=77.3

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|++|+.+.+++...+....+++++..+.+....... ....+++.++..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        57 l~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~N  132 (285)
T cd05631          57 VNSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNM-GNPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPEN  132 (285)
T ss_pred             cCCCcEEEEEEEEccCCeEEEEEEecCCCcHHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHH
Confidence            57999999999998877666666666655543333221 223488899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||++........   .....|+..|+||
T Consensus       133 ill~~~~~~kl~Dfg~~~~~~~~~~---~~~~~g~~~y~aP  170 (285)
T cd05631         133 ILLDDRGHIRISDLGLAVQIPEGET---VRGRVGTVGYMAP  170 (285)
T ss_pred             EEECCCCCEEEeeCCCcEEcCCCCe---ecCCCCCCCccCH
Confidence                      379998876432221   2334678889987

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.71  E-value=1.4e-17  Score=101.23  Aligned_cols=83  Identities=16%  Similarity=0.129  Sum_probs=66.3

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.+.....++++++..+++...+..   ...++...+..++.|++.|+.|+|+.   +++|+|+||+|
T Consensus        58 l~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~N  131 (377)
T cd05629          58 SDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIK---YDTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDN  131 (377)
T ss_pred             CCCCCcceEEEEEEcCCeeEEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHH
Confidence            4799999999999987766666666655555443322   23478888899999999999999999   99999999999


Q ss_pred             ----------cCCCccccc
Q 047898           81 ----------IADFNLSNQ   89 (111)
Q Consensus        81 ----------i~~~g~~~~   89 (111)
                                ++|||+++.
T Consensus       132 Ill~~~~~~kl~DfGla~~  150 (377)
T cd05629         132 ILIDRGGHIKLSDFGLSTG  150 (377)
T ss_pred             EEECCCCCEEEeecccccc
Confidence                      379998753

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.70  E-value=1.5e-17  Score=96.93  Aligned_cols=108  Identities=19%  Similarity=0.263  Sum_probs=74.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCC--CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQP--SPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRS   78 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~   78 (111)
                      ++|+||+++++.+........+.+++..+++...+.....  ....++.....++.|++.|+.|+|++   +++|+|++|
T Consensus        52 l~h~nii~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp  128 (269)
T cd05042          52 LNHPNVLQCLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLAL  128 (269)
T ss_pred             CCCCCcceEEEEECCCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccH
Confidence            5799999999999887766666666665555544433221  12246777888999999999999999   999999999


Q ss_pred             CC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           79 SN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        79 ~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +|          ++|||.+................++..|+||
T Consensus       129 ~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  171 (269)
T cd05042         129 RNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAP  171 (269)
T ss_pred             hheEecCCCcEEEeccccccccccchheeccCCCCCcccccCH
Confidence            99          4899987643322111111222345567776

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.70  E-value=1.5e-17  Score=97.89  Aligned_cols=103  Identities=23%  Similarity=0.350  Sum_probs=73.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++........+++++.. .+...+..  ....++...+..++.|++.|+.|+|++   +++|+|++|+|
T Consensus        60 l~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~N  133 (288)
T cd07871          60 LKHANIVTLHDIIHTERCLTLVFEYLDS-DLKQYLDN--CGNLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQN  133 (288)
T ss_pred             CCCCCEeeEEEEEcCCCeEEEEEeCCCc-CHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHH
Confidence            5899999999999876654455555442 22222211  122368888899999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.++........  .....++..|+||
T Consensus       134 il~~~~~~~kl~DfG~~~~~~~~~~~--~~~~~~~~~y~aP  172 (288)
T cd07871         134 LLINEKGELKLADFGLARAKSVPTKT--YSNEVVTLWYRPP  172 (288)
T ss_pred             EEECCCCCEEECcCcceeeccCCCcc--ccCceecccccCh
Confidence                      4899988654332221  2334567888887

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.70  E-value=1.4e-17  Score=100.77  Aligned_cols=84  Identities=14%  Similarity=0.145  Sum_probs=68.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.+++...++++++..+.+...+..   ...++..++..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        58 l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~N  131 (364)
T cd05599          58 ADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMK---KDTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDN  131 (364)
T ss_pred             CCCCCCcceEEEEEcCCeEEEEECCCCCcHHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHH
Confidence            4799999999999987766667677666655544432   23388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccC
Q 047898           81 ----------IADFNLSNQA   90 (111)
Q Consensus        81 ----------i~~~g~~~~~   90 (111)
                                ++|||++..+
T Consensus       132 Il~~~~~~~kl~Dfg~~~~~  151 (364)
T cd05599         132 LLLDAKGHIKLSDFGLCTGL  151 (364)
T ss_pred             eEECCCCCEEEeecccceec
Confidence                      3789987654

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.70  E-value=7.8e-18  Score=105.73  Aligned_cols=104  Identities=28%  Similarity=0.335  Sum_probs=83.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||+++|+|.... -+++.+....|.++..+......  ++......++.|++.++.||++.   +++||||-.+|
T Consensus       448 fdHphIikLIGv~~e~P-~WivmEL~~~GELr~yLq~nk~s--L~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRN  521 (974)
T KOG4257|consen  448 FDHPHIIKLIGVCVEQP-MWIVMELAPLGELREYLQQNKDS--LPLRTLTLYCYQICTALAYLESK---RFVHRDIAARN  521 (974)
T ss_pred             CCCcchhheeeeeeccc-eeEEEecccchhHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhh
Confidence            58999999999998643 56666777777777777654333  88888999999999999999999   99999999999


Q ss_pred             c----------CCCcccccCCCCcccccccccCccccccCC
Q 047898           81 I----------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 i----------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |          .|||++|.+.....+..+ ....++.||||
T Consensus       522 iLVsSp~CVKLaDFGLSR~~ed~~yYkaS-~~kLPIKWmaP  561 (974)
T KOG4257|consen  522 ILVSSPQCVKLADFGLSRYLEDDAYYKAS-RGKLPIKWMAP  561 (974)
T ss_pred             eeecCcceeeecccchhhhccccchhhcc-ccccceeecCc
Confidence            3          899999988766654322 34457889998

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.70  E-value=7.5e-18  Score=105.36  Aligned_cols=99  Identities=27%  Similarity=0.346  Sum_probs=74.5

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      |+|||+|.+.|+|......+++.+|+... ..+++..+.+  .+...++..++.+.+.|+.|||+.   +.||||+|..|
T Consensus        83 l~HPntieYkgCyLre~TaWLVMEYClGS-AsDlleVhkK--plqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGN  156 (948)
T KOG0577|consen   83 LRHPNTIEYKGCYLREHTAWLVMEYCLGS-ASDLLEVHKK--PLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGN  156 (948)
T ss_pred             ccCCCcccccceeeccchHHHHHHHHhcc-HHHHHHHHhc--cchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccc
Confidence            68999999999999766556665554422 2222222222  277888889999999999999999   99999999999


Q ss_pred             c----------CCCcccccCCCCcccccccccCccccccCC
Q 047898           81 I----------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 i----------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |          .|||.+.....      ..+++||++||||
T Consensus       157 ILLse~g~VKLaDFGSAsi~~P------AnsFvGTPywMAP  191 (948)
T KOG0577|consen  157 ILLSEPGLVKLADFGSASIMAP------ANSFVGTPYWMAP  191 (948)
T ss_pred             eEecCCCeeeeccccchhhcCc------hhcccCCccccch
Confidence            4          78887654422      3568999999998

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.70  E-value=2.9e-17  Score=97.23  Aligned_cols=103  Identities=24%  Similarity=0.325  Sum_probs=73.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++........+++++. +.+...+..  ....++...+..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        60 l~h~niv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~N  133 (303)
T cd07869          60 LKHANIVLLHDIIHTKETLTLVFEYVH-TDLCQYMDK--HPGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQN  133 (303)
T ss_pred             CCCCCcCeEEEEEecCCeEEEEEECCC-cCHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHH
Confidence            579999999999988765555555553 222222221  123378888899999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+.........  .....++..|+||
T Consensus       134 ill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aP  172 (303)
T cd07869         134 LLISDTGELKLADFGLARAKSVPSHT--YSNEVVTLWYRPP  172 (303)
T ss_pred             EEECCCCCEEECCCCcceeccCCCcc--CCCCcccCCCCCh
Confidence                      4899987644322211  2334578889887

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.70  E-value=4.2e-17  Score=95.44  Aligned_cols=76  Identities=16%  Similarity=0.244  Sum_probs=61.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.+.....++.+++..+.+...+...  ...+++..+..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        73 l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~N  147 (274)
T cd05076          73 VSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKE--KGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKN  147 (274)
T ss_pred             CCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCccc
Confidence            57999999999999877666777777766654444322  23378888999999999999999999   99999999999


Q ss_pred             c
Q 047898           81 I   81 (111)
Q Consensus        81 i   81 (111)
                      +
T Consensus       148 i  148 (274)
T cd05076         148 I  148 (274)
T ss_pred             E
Confidence            4

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.70  E-value=2.1e-17  Score=100.61  Aligned_cols=83  Identities=18%  Similarity=0.135  Sum_probs=66.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++.+.+...++++++..+.+...+..   ...+++..+..++.|++.|+.|+|+.   +++|+|+||+|
T Consensus        58 l~h~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~---~~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~N  131 (381)
T cd05626          58 ADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIR---MEVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDN  131 (381)
T ss_pred             cCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHH
Confidence            5799999999999987766666666665555444332   23378888889999999999999999   99999999999


Q ss_pred             ----------cCCCccccc
Q 047898           81 ----------IADFNLSNQ   89 (111)
Q Consensus        81 ----------i~~~g~~~~   89 (111)
                                ++|||++..
T Consensus       132 ili~~~~~~kL~DFGl~~~  150 (381)
T cd05626         132 ILIDLDGHIKLTDFGLCTG  150 (381)
T ss_pred             EEECCCCCEEEeeCcCCcc
Confidence                      379998653

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.70  E-value=2.1e-17  Score=96.99  Aligned_cols=106  Identities=20%  Similarity=0.232  Sum_probs=77.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCC-CCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQG-AQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~   79 (111)
                      ++|+||+++.+++........+++++..+.+...... ......+++.++..++.|++.|+.|+|+.   +++|+|++++
T Consensus        50 l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~  126 (280)
T cd05608          50 VHSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPE  126 (280)
T ss_pred             CCCCcEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHH
Confidence            5799999999999887666566666665554332211 12233488999999999999999999999   9999999999


Q ss_pred             C----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           80 N----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |          ++|||.+.........  .....++..|+||
T Consensus       127 Nili~~~~~~~l~dfg~~~~~~~~~~~--~~~~~g~~~y~aP  166 (280)
T cd05608         127 NVLLDNDGNVRISDLGLAVELKDGQSK--TKGYAGTPGFMAP  166 (280)
T ss_pred             HEEECCCCCEEEeeCccceecCCCCcc--ccccCCCcCccCH
Confidence            9          3789988655433221  2334678889887

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.70  E-value=2.2e-17  Score=100.29  Aligned_cols=103  Identities=15%  Similarity=0.125  Sum_probs=77.5

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.+.....++.+++..+.+...+..    ..++...+..++.|++.|+.|+|++   +++|+|++|+|
T Consensus       100 ~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~N  172 (371)
T cd05622         100 ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDN  172 (371)
T ss_pred             CCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHH
Confidence            4799999999999887766666666665555443321    2378888888999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||++......... ......||+.|+||
T Consensus       173 Ill~~~~~ikL~DfG~a~~~~~~~~~-~~~~~~gt~~y~aP  212 (371)
T cd05622         173 MLLDKSGHLKLADFGTCMKMNKEGMV-RCDTAVGTPDYISP  212 (371)
T ss_pred             EEECCCCCEEEEeCCceeEcCcCCcc-cccCcccCccccCH
Confidence                      4799998765432211 12345789999998

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.69  E-value=4.6e-17  Score=98.30  Aligned_cols=99  Identities=25%  Similarity=0.384  Sum_probs=73.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++...+....+++++..+.+..       ....+...+..++.|++.|+.|+|++   +++|+|++++|
T Consensus       129 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~-------~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~N  198 (353)
T PLN00034        129 VNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEG-------THIADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSN  198 (353)
T ss_pred             CCCCCcceeeeEeccCCeEEEEEecCCCCcccc-------cccCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHH
Confidence            579999999999988776666666665543321       11245677788999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++........  .....|+..|+||
T Consensus       199 Ill~~~~~~kL~DfG~~~~~~~~~~~--~~~~~gt~~y~aP  237 (353)
T PLN00034        199 LLINSAKNVKIADFGVSRILAQTMDP--CNSSVGTIAYMSP  237 (353)
T ss_pred             EEEcCCCCEEEcccccceeccccccc--ccccccCccccCc
Confidence                      4899988765433221  2334678889887

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.69  E-value=2.3e-17  Score=100.49  Aligned_cols=82  Identities=17%  Similarity=0.109  Sum_probs=65.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++.+.+...++++++..+.+...+..   ...++...+..++.|++.|+.|+|++   +++|+|+||+|
T Consensus        58 ~~h~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~---~~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~N  131 (382)
T cd05625          58 ADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIR---MGIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDN  131 (382)
T ss_pred             CCCCcCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHH
Confidence            4799999999999987766666666665554444332   23378888899999999999999999   99999999999


Q ss_pred             ----------cCCCcccc
Q 047898           81 ----------IADFNLSN   88 (111)
Q Consensus        81 ----------i~~~g~~~   88 (111)
                                ++|||++.
T Consensus       132 ILl~~~g~~kL~DFGla~  149 (382)
T cd05625         132 ILIDRDGHIKLTDFGLCT  149 (382)
T ss_pred             EEECCCCCEEEeECCCCc
Confidence                      37999865

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.69  E-value=4.1e-17  Score=99.25  Aligned_cols=65  Identities=26%  Similarity=0.412  Sum_probs=49.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           44 LDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        44 l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +++.++..++.|++.|+.|+|++   +++|+|++|+|          ++|||+++...............++..||||
T Consensus       209 l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aP  283 (374)
T cd05106         209 LDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAP  283 (374)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCH
Confidence            67888899999999999999999   99999999999          4899998765433221111222345678887

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.69  E-value=6.8e-18  Score=104.95  Aligned_cols=104  Identities=26%  Similarity=0.456  Sum_probs=76.5

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +|.||+-+.|+|.++.. .++...++...++..++...  ..|+..+...++.|++.|+.|||.+   +|||+|+|..| 
T Consensus       446 RH~NIlLFMG~~~~p~~-AIiTqwCeGsSLY~hlHv~e--tkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNI  519 (678)
T KOG0193|consen  446 RHENILLFMGACMNPPL-AIITQWCEGSSLYTHLHVQE--TKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNI  519 (678)
T ss_pred             chhhheeeehhhcCCce-eeeehhccCchhhhhccchh--hhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccce
Confidence            69999999999998775 55555555555555554333  3388899999999999999999999   99999999999 


Q ss_pred             ---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                               |.|||++..-.-.....-.....|...||||
T Consensus       520 Fl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAP  559 (678)
T KOG0193|consen  520 FLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAP  559 (678)
T ss_pred             EEccCCcEEEecccceeeeeeeccccccCCCccchhhhcH
Confidence                     5899986421111111113345678889998

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.69  E-value=2.9e-17  Score=100.40  Aligned_cols=104  Identities=20%  Similarity=0.245  Sum_probs=74.1

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++........+++++. +.+...+   .....+++.++..++.|++.|+.|+|++   +++|+|++++|
T Consensus       143 l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l---~~~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~N  215 (392)
T PHA03207        143 ISHRAIINLIHAYRWKSTVCMVMPKYK-CDLFTYV---DRSGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTEN  215 (392)
T ss_pred             cCCCCccceeeeEeeCCEEEEEehhcC-CCHHHHH---HhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHH
Confidence            589999999999987654444433332 2222222   2233488999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||++................||..|+||
T Consensus       216 ill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aP  256 (392)
T PHA03207        216 IFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSP  256 (392)
T ss_pred             EEEcCCCCEEEccCccccccCcccccccccccccccCccCH
Confidence                      4899988765443222112345688899987

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.69  E-value=2.2e-17  Score=100.36  Aligned_cols=82  Identities=17%  Similarity=0.127  Sum_probs=66.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++.+.+.+...++++++..+.+...+..   ...++...+..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        58 l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~---~~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~N  131 (376)
T cd05598          58 ADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIR---LGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDN  131 (376)
T ss_pred             CCCCCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHH
Confidence            5799999999999987766666676666655444432   23378888889999999999999999   99999999999


Q ss_pred             ----------cCCCcccc
Q 047898           81 ----------IADFNLSN   88 (111)
Q Consensus        81 ----------i~~~g~~~   88 (111)
                                ++|||++.
T Consensus       132 ill~~~~~ikL~DFG~a~  149 (376)
T cd05598         132 ILIDRDGHIKLTDFGLCT  149 (376)
T ss_pred             EEECCCCCEEEEeCCCCc
Confidence                      37999864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.69  E-value=1.9e-17  Score=99.18  Aligned_cols=100  Identities=24%  Similarity=0.263  Sum_probs=78.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+...++++++..+.+...+..   ...+++.++..++.|++.|+.|+|+.   +++|+|++++|
T Consensus        58 ~~h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~N  131 (333)
T cd05600          58 TKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNN---LGVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPEN  131 (333)
T ss_pred             CCCCCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHH
Confidence            4699999999999987766666677666655544432   23378889999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||++......     .....|++.|+||
T Consensus       132 il~~~~~~~kL~Dfg~a~~~~~~-----~~~~~gt~~y~aP  167 (333)
T cd05600         132 FLIDASGHIKLTDFGLSKGIVTY-----ANSVVGSPDYMAP  167 (333)
T ss_pred             EEECCCCCEEEEeCcCCcccccc-----cCCcccCccccCh
Confidence                      3799988755431     2345688889887

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.69  E-value=5.5e-17  Score=98.68  Aligned_cols=66  Identities=24%  Similarity=0.372  Sum_probs=49.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           43 VLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        43 ~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      .+++..+..++.|++.|+.|+|+.   +++|+|++|+|          ++|||+++...............++..|+||
T Consensus       210 ~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aP  285 (375)
T cd05104         210 ALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAP  285 (375)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCcccccccCCCCCCcceeCh
Confidence            367888899999999999999999   99999999999          4799998765443322111223345668887

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.69  E-value=3e-17  Score=98.01  Aligned_cols=102  Identities=24%  Similarity=0.197  Sum_probs=76.4

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +|++|+++.+++...+...++++++..+.+...+..   ...+++.++..++.|++.|+.|+|+.   +++|+|++|+| 
T Consensus        59 ~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Ni  132 (323)
T cd05616          59 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQ---VGRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNV  132 (323)
T ss_pred             CCCeEeeEEEEEecCCEEEEEEcCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHe
Confidence            578999999999887766666666665554433322   23378899999999999999999999   99999999999 


Q ss_pred             ---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                               ++|||+++........  .....||+.|+||
T Consensus       133 ll~~~~~~kL~DfG~~~~~~~~~~~--~~~~~gt~~y~aP  170 (323)
T cd05616         133 MLDSEGHIKIADFGMCKENMWDGVT--TKTFCGTPDYIAP  170 (323)
T ss_pred             EECCCCcEEEccCCCceecCCCCCc--cccCCCChhhcCH
Confidence                     4899988654322211  2345688899987

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.69  E-value=5.5e-17  Score=94.60  Aligned_cols=108  Identities=17%  Similarity=0.219  Sum_probs=74.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCC-CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQ-PSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~   79 (111)
                      ++||||+++++.|........+++++..+++...+.... .....+...+..++.|++.|+.|+|+.   +++|+|++++
T Consensus        52 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~  128 (268)
T cd05086          52 LQHPNILQCLGQCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALR  128 (268)
T ss_pred             cCCcchhheEEEecCCCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccc
Confidence            589999999999998766666666666555544433221 122356677788999999999999999   9999999999


Q ss_pred             C----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           80 N----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |          ++|||.+................++..|+||
T Consensus       129 nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  170 (268)
T cd05086         129 NCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAP  170 (268)
T ss_pred             eEEEcCCccEEecccccccccCcchhhhcccCCcCcccccCc
Confidence            9          3799987543222111111234556677776

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.69  E-value=2.5e-17  Score=98.17  Aligned_cols=102  Identities=25%  Similarity=0.269  Sum_probs=75.8

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +||||+++++++...+....+++++..+.+.....   ....+++.++..++.|++.|+.|+|+.   +++|+|++++| 
T Consensus        54 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~---~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Ni  127 (318)
T cd05570          54 KHPFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQ---RSGRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNV  127 (318)
T ss_pred             CCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHe
Confidence            69999999999988776666666665554433322   222488999999999999999999999   99999999999 


Q ss_pred             ---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                               ++|||+++........  .....++..|+||
T Consensus       128 ll~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aP  165 (318)
T cd05570         128 LLDSEGHIKIADFGMCKEGILGGVT--TSTFCGTPDYIAP  165 (318)
T ss_pred             EECCCCcEEecccCCCeecCcCCCc--ccceecCccccCH
Confidence                     4799987643222221  2334678889887

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.69  E-value=2.3e-17  Score=98.86  Aligned_cols=105  Identities=15%  Similarity=0.067  Sum_probs=77.8

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++.+.+...++.+++..+++...+...  ...++..++..++.|++.|+.|+|++   +++|+|++++|
T Consensus        58 ~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~N  132 (331)
T cd05597          58 GDRRWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKF--EDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDN  132 (331)
T ss_pred             CCCCCCCceEEEEecCCeEEEEEecCCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHH
Confidence            47999999999999877666666666655554443221  22378889999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+......... ......||+.||||
T Consensus       133 ill~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aP  172 (331)
T cd05597         133 VLLDKNGHIRLADFGSCLRLLADGTV-QSNVAVGTPDYISP  172 (331)
T ss_pred             EEECCCCCEEEEECCceeecCCCCCc-cccceeccccccCH
Confidence                      4789987655433221 12224588899987

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.69  E-value=2.5e-17  Score=100.02  Aligned_cols=103  Identities=16%  Similarity=0.130  Sum_probs=77.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.++....++++++..+++...+..    ..++......++.|++.|+.|+|+.   +++|+|++|+|
T Consensus       100 ~~h~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~----~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~N  172 (370)
T cd05596         100 ANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSN----YDIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDN  172 (370)
T ss_pred             CCCCCcceEEEEEecCCEEEEEEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHH
Confidence            4799999999999887766667677666555444321    2377888888999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||++......... ......||+.|+||
T Consensus       173 ILl~~~~~~kL~DfG~~~~~~~~~~~-~~~~~~gt~~y~aP  212 (370)
T cd05596         173 MLLDKSGHLKLADFGTCMKMDANGMV-RCDTAVGTPDYISP  212 (370)
T ss_pred             EEEcCCCCEEEEeccceeeccCCCcc-cCCCCCCCcCeECH
Confidence                      4899988765432211 12345688999987

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.69  E-value=2.6e-17  Score=98.58  Aligned_cols=103  Identities=20%  Similarity=0.144  Sum_probs=76.4

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +|++|+++++++...+....+.+++..+.+...+..   ...+++.++..++.|++.|+.|+|++   +++|+|++++| 
T Consensus        63 ~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Ni  136 (332)
T cd05614          63 QSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQ---RDNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENI  136 (332)
T ss_pred             CCCCcccEEEEEecCCEEEEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHe
Confidence            589999999999877655566666655544333322   23388899999999999999999999   99999999999 


Q ss_pred             ---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                               ++|||+++........ ......||..|+||
T Consensus       137 li~~~~~~kl~DfG~~~~~~~~~~~-~~~~~~gt~~y~aP  175 (332)
T cd05614         137 LLDSEGHVVLTDFGLSKEFLSEEKE-RTYSFCGTIEYMAP  175 (332)
T ss_pred             EECCCCCEEEeeCcCCccccccCCC-ccccccCCccccCH
Confidence                     4899988765433221 12345688999987

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.68  E-value=6.1e-17  Score=98.34  Aligned_cols=103  Identities=22%  Similarity=0.204  Sum_probs=78.7

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +.++||.+--.|++++-..++ ..++++....+..+..+.+.+++.++.+|+.+|+.|+.+||+.   +|+.||+||+| 
T Consensus       243 ~s~FiVslaYAfeTkd~LClV-LtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNI  318 (591)
T KOG0986|consen  243 SSPFIVSLAYAFETKDALCLV-LTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENI  318 (591)
T ss_pred             ccCcEEEEeeeecCCCceEEE-EEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhhe
Confidence            457788887777776644444 3344444445555666667799999999999999999999999   99999999999 


Q ss_pred             ---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                               |+|+|++-.+.....   ....+||..||||
T Consensus       319 LLDd~GhvRISDLGLAvei~~g~~---~~~rvGT~GYMAP  355 (591)
T KOG0986|consen  319 LLDDHGHVRISDLGLAVEIPEGKP---IRGRVGTVGYMAP  355 (591)
T ss_pred             eeccCCCeEeeccceEEecCCCCc---cccccCcccccCH
Confidence                     589998876654432   2345899999998

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.68  E-value=4.4e-17  Score=97.53  Aligned_cols=105  Identities=15%  Similarity=0.088  Sum_probs=78.8

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++.+++...+...++++++..+.+...+....  ..+++..+..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        58 ~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~N  132 (330)
T cd05601          58 SNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYE--DQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPEN  132 (330)
T ss_pred             CCCCCCcceeeEEecCCeEEEEECCCCCCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHh
Confidence            479999999999988776666667666655544443321  2388899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||++......... ......+|+.|+||
T Consensus       133 Ill~~~~~~kL~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aP  172 (330)
T cd05601         133 VLIDRTGHIKLADFGSAARLTANKMV-NSKLPVGTPDYIAP  172 (330)
T ss_pred             eEECCCCCEEeccCCCCeECCCCCce-eeecccCCccccCH
Confidence                      4899998765433221 12334678889887

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.68  E-value=4.2e-17  Score=100.98  Aligned_cols=104  Identities=23%  Similarity=0.275  Sum_probs=70.2

Q ss_pred             CCCccceeeeeeeeeCCc-----cc---hhhhhhhhhhcccCcC-CCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCe
Q 047898            1 LKHENLVELLGYCVEGNL-----RD---ELIWIIHVITCKKGVQ-GAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSI   71 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~-----~~---~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i   71 (111)
                      ++|+||+++.+++.....     ..   .+.+++... +...+. .......++...+..++.|++.|+.|||+.   ++
T Consensus       116 l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~~-l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~I  191 (440)
T PTZ00036        116 LNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQT-VHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FI  191 (440)
T ss_pred             cCCCCCcceeeeEeecccccCCCceEEEEEEecCCcc-HHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CE
Confidence            589999999988754211     11   222333211 111111 112234488899999999999999999999   99


Q ss_pred             eecCCCCCC-----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           72 IQRDIRSSN-----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        72 ~h~~l~~~n-----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +|||++|+|           ++|||+++.......   .....+|+.|+||
T Consensus       192 iHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~~---~~~~~~t~~y~aP  239 (440)
T PTZ00036        192 CHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQR---SVSYICSRFYRAP  239 (440)
T ss_pred             ecCCcCHHHEEEcCCCCceeeeccccchhccCCCC---cccCCCCcCccCH
Confidence            999999999           489999876543322   2335678889987

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.68  E-value=1.4e-17  Score=100.46  Aligned_cols=107  Identities=22%  Similarity=0.276  Sum_probs=82.0

Q ss_pred             CCCccceeeeeeeeeCCccch----hhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhh-----cCCCCe
Q 047898            1 LKHENLVELLGYCVEGNLRDE----LIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHE-----KVQPSI   71 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~-----~~~~~i   71 (111)
                      |+|+||..+++.-..++....    +..|-+.|++.+.+.+    ..++...+..++..+++|+.+||.     +.+|.|
T Consensus       262 LRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r----~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaI  337 (513)
T KOG2052|consen  262 LRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNR----NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAI  337 (513)
T ss_pred             hccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhh----ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchh
Confidence            689999999988776554433    4455556666555543    338899999999999999999995     447789


Q ss_pred             eecCCCCCC----------cCCCcccccCCCCcccc--cccccCccccccCC
Q 047898           72 IQRDIRSSN----------IADFNLSNQAPNMAARL--HSTRVLGTFSYHAP  111 (111)
Q Consensus        72 ~h~~l~~~n----------i~~~g~~~~~~~~~~~~--~~~~~~~~~~~~aP  111 (111)
                      .|||+|+.|          |.|+|++....+.+...  .....+||.+||||
T Consensus       338 AHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAP  389 (513)
T KOG2052|consen  338 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAP  389 (513)
T ss_pred             hccccccccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccCh
Confidence            999999999          58999987766654432  24567999999998

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.68  E-value=9.4e-18  Score=98.90  Aligned_cols=100  Identities=22%  Similarity=0.276  Sum_probs=75.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.+.+....+++++..+.+...+..   ...++......++.|++.|+.|+|++   +++|+|++|+|
T Consensus        58 l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~N  131 (291)
T cd05612          58 VSHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRN---SGRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPEN  131 (291)
T ss_pred             CCCCcHhhhHhhhccCCeEEEEEeCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHH
Confidence            5799999999999886655556666655544433322   23378888899999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||++......     .....|++.|+||
T Consensus       132 Ili~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aP  167 (291)
T cd05612         132 ILLDKEGHIKLTDFGFAKKLRDR-----TWTLCGTPEYLAP  167 (291)
T ss_pred             eEECCCCCEEEEecCcchhccCC-----cccccCChhhcCH
Confidence                      3789988755332     1234678888887

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.68  E-value=4.4e-17  Score=97.65  Aligned_cols=105  Identities=15%  Similarity=0.074  Sum_probs=79.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|++|+++++++.+.+...++++++..+++...+...  ...++...+..++.|++.|+.|+|+.   +++|+|++++|
T Consensus        58 ~~~~~i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~--~~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~N  132 (332)
T cd05623          58 GDNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKF--EDRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDN  132 (332)
T ss_pred             CCCCCEeeEEEEEecCCEEEEEEeccCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHH
Confidence            47999999999999877666777777666655554322  22378888999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||++......... ......||+.|+||
T Consensus       133 ili~~~~~~kL~DfG~a~~~~~~~~~-~~~~~~gt~~y~aP  172 (332)
T cd05623         133 ILMDMNGHIRLADFGSCLKLMEDGTV-QSSVAVGTPDYISP  172 (332)
T ss_pred             EEECCCCCEEEeecchheecccCCcc-eecccccCccccCH
Confidence                      4799988654332221 12335688999987

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.68  E-value=5.6e-17  Score=98.14  Aligned_cols=84  Identities=13%  Similarity=0.137  Sum_probs=67.3

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|++|+++++.+.+.+...++++++..+.+...+..   ...++...+..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        58 l~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~N  131 (360)
T cd05627          58 ADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMK---KDTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDN  131 (360)
T ss_pred             CCCCCEeeEEEEEEcCCEEEEEEeCCCCccHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHH
Confidence            4799999999999987766666666665555444332   23388899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccC
Q 047898           81 ----------IADFNLSNQA   90 (111)
Q Consensus        81 ----------i~~~g~~~~~   90 (111)
                                ++|||++..+
T Consensus       132 Ili~~~~~vkL~DfG~~~~~  151 (360)
T cd05627         132 LLLDAKGHVKLSDFGLCTGL  151 (360)
T ss_pred             EEECCCCCEEEeeccCCccc
Confidence                      3799987654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.67  E-value=9.4e-18  Score=100.90  Aligned_cols=103  Identities=27%  Similarity=0.395  Sum_probs=83.8

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      .+++||.++++.+..+...+.+.+++..+...+.+..   ...+.+.....+..+++.|+.|+|.+   +.+|||+++.|
T Consensus        68 ~~~~~it~yygsyl~g~~LwiiMey~~gGsv~~lL~~---~~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaan  141 (467)
T KOG0201|consen   68 CDSPNITEYYGSYLKGTKLWIIMEYCGGGSVLDLLKS---GNILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAAN  141 (467)
T ss_pred             cCcchHHhhhhheeecccHHHHHHHhcCcchhhhhcc---CCCCccceeeeehHHHHHHhhhhhhc---ceecccccccc
Confidence            3678999999999998888888788777666555532   22246666677788999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                +.|||++.++..+...  ..+++||+.||||
T Consensus       142 il~s~~g~vkl~DfgVa~ql~~~~~r--r~tfvGTPfwMAP  180 (467)
T KOG0201|consen  142 ILLSESGDVKLADFGVAGQLTNTVKR--RKTFVGTPFWMAP  180 (467)
T ss_pred             eeEeccCcEEEEecceeeeeechhhc--cccccccccccch
Confidence                      3899999988777665  4778999999998

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.67  E-value=6e-17  Score=97.95  Aligned_cols=102  Identities=24%  Similarity=0.295  Sum_probs=73.5

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++........+++++. +.+...+..  ....+++.++..++.|++.|+.|+|+.   +++|+|++++|
T Consensus       114 l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~N  187 (357)
T PHA03209        114 VNHPSVIRMKDTLVSGAITCMVLPHYS-SDLYTYLTK--RSRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTEN  187 (357)
T ss_pred             CCCCCCcChhheEEeCCeeEEEEEccC-CcHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHH
Confidence            589999999999998765544444432 222222221  223488999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.++.......   .....||..|+||
T Consensus       188 ill~~~~~~kl~DfG~a~~~~~~~~---~~~~~gt~~y~aP  225 (357)
T PHA03209        188 IFINDVDQVCIGDLGAAQFPVVAPA---FLGLAGTVETNAP  225 (357)
T ss_pred             EEECCCCCEEEecCccccccccCcc---cccccccccccCC
Confidence                      489998864322211   2335678889987

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.67  E-value=6.2e-17  Score=100.32  Aligned_cols=103  Identities=24%  Similarity=0.272  Sum_probs=79.3

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      +.||.||.+...|++++.-+.+.+-+..-.+...+....  ..+++....+++.||+.++.|||.+   +|+|.|+||+|
T Consensus       620 l~HPGiV~le~M~ET~ervFVVMEKl~GDMLEMILSsEk--gRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPEN  694 (888)
T KOG4236|consen  620 LHHPGIVNLECMFETPERVFVVMEKLHGDMLEMILSSEK--GRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPEN  694 (888)
T ss_pred             cCCCCeeEEEEeecCCceEEEEehhhcchHHHHHHHhhc--ccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchh
Confidence            579999999999999775555444443323333333322  2388888899999999999999999   99999999999


Q ss_pred             -------------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 -------------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 -------------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                   ++|||++|.+.+..-+   .+.+||+.|+||
T Consensus       695 VLLas~~~FPQvKlCDFGfARiIgEksFR---rsVVGTPAYLaP  735 (888)
T KOG4236|consen  695 VLLASASPFPQVKLCDFGFARIIGEKSFR---RSVVGTPAYLAP  735 (888)
T ss_pred             eeeccCCCCCceeeccccceeecchhhhh---hhhcCCccccCH
Confidence                         4899999988766443   456899999998

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.67  E-value=9.4e-17  Score=94.45  Aligned_cols=103  Identities=27%  Similarity=0.426  Sum_probs=70.1

Q ss_pred             CCCccceeeeeeeeeCC-----ccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecC
Q 047898            1 LKHENLVELLGYCVEGN-----LRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRD   75 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~   75 (111)
                      ++||||++++++|....     ....+++++. +.+...+.. .....+++.++..++.|++.|+.|+|+.   +++|+|
T Consensus        61 ~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~d  135 (290)
T cd07862          61 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDK-VPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRD  135 (290)
T ss_pred             cCCCCcceEEEEEecccCCCCCcEEEEEccCC-CCHHHHHHh-CCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCC
Confidence            36999999999986321     1122333332 222222221 1223378899999999999999999999   999999


Q ss_pred             CCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           76 IRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        76 l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      ++|+|          ++|||.++.......   .....++..|+||
T Consensus       136 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aP  178 (290)
T cd07862         136 LKPQNILVTSSGQIKLADFGLARIYSFQMA---LTSVVVTLWYRAP  178 (290)
T ss_pred             CCHHHEEEcCCCCEEEccccceEeccCCcc---cccccccccccCh
Confidence            99999          489998865433211   2345678889987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.67  E-value=1.1e-16  Score=93.87  Aligned_cols=104  Identities=18%  Similarity=0.183  Sum_probs=76.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++.+++..+.....+++++..+.+....... ....+++.++..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        50 l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~N  125 (277)
T cd05607          50 VNSPFIVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNV-GERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPEN  125 (277)
T ss_pred             cCCCcEEEEEEEEecCCeEEEEEecCCCCCHHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHh
Confidence            57999999999998876665666666555443333221 222378888899999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+........   .....++..|+||
T Consensus       126 ili~~~~~~~l~Dfg~~~~~~~~~~---~~~~~~~~~y~aP  163 (277)
T cd05607         126 VLLDDQGNCRLSDLGLAVELKDGKT---ITQRAGTNGYMAP  163 (277)
T ss_pred             EEEcCCCCEEEeeceeeeecCCCce---eeccCCCCCccCH
Confidence                      478998765543321   1234577788887

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.67  E-value=1.3e-16  Score=93.49  Aligned_cols=105  Identities=21%  Similarity=0.298  Sum_probs=72.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.... ...+.+++..+++...+...  ...+++..+..++.|++.|+.|+|+.   +++|+|++++|
T Consensus        66 l~h~~iv~~~~~~~~~~-~~~i~e~~~~gsL~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~n  139 (279)
T cd05111          66 LDHAYIVRLLGICPGAS-LQLVTQLSPLGSLLDHVRQH--RDSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARN  139 (279)
T ss_pred             CCCCCcceEEEEECCCc-cEEEEEeCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcce
Confidence            47999999999886432 33444555555554444322  22378899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.++...............++..|++|
T Consensus       140 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~p  180 (279)
T cd05111         140 ILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMAL  180 (279)
T ss_pred             EEEcCCCcEEEcCCccceeccCCCcccccCCCCCcccccCH
Confidence                      4899988765433221112233456677776

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.67  E-value=5.1e-17  Score=97.36  Aligned_cols=105  Identities=15%  Similarity=0.082  Sum_probs=78.8

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|++|+++.+++.+.+...++++++..+.+...+...  ...++...+..++.|++.|+.|+|+.   +++|+|++++|
T Consensus        58 ~~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~N  132 (331)
T cd05624          58 GDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKF--EDRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDN  132 (331)
T ss_pred             CCCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHH
Confidence            47999999999999877666676776666555444321  22378888999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||++......... ......|++.|+||
T Consensus       133 ill~~~~~~kl~DfG~a~~~~~~~~~-~~~~~~gt~~y~aP  172 (331)
T cd05624         133 VLLDMNGHIRLADFGSCLKMNQDGTV-QSSVAVGTPDYISP  172 (331)
T ss_pred             EEEcCCCCEEEEeccceeeccCCCce-eeccccCCcccCCH
Confidence                      4799988755433221 12235688899987

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.67  E-value=8e-17  Score=94.70  Aligned_cols=104  Identities=23%  Similarity=0.265  Sum_probs=77.1

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++.+..++....+++++..+.+....... ....+++..+..++.|++.|+.|+|+.   +++|+|++++|
T Consensus        57 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~N  132 (285)
T cd05605          57 VNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNM-GNPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPEN  132 (285)
T ss_pred             cCCCCEeeeeeeecCCCeEEEEEeccCCCcHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHH
Confidence            57999999999998877666666666655554333221 223488999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                +.|||.+........   .....++..|+||
T Consensus       133 il~~~~~~~~l~Dfg~~~~~~~~~~---~~~~~~~~~y~aP  170 (285)
T cd05605         133 ILLDDYGHIRISDLGLAVEIPEGET---IRGRVGTVGYMAP  170 (285)
T ss_pred             EEECCCCCEEEeeCCCceecCCCCc---cccccCCCCccCc
Confidence                      478998765432221   2234678888887

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.67  E-value=1.5e-16  Score=93.33  Aligned_cols=108  Identities=24%  Similarity=0.334  Sum_probs=75.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCC-------------CCCCCCHHHHHHHHHHHHHHHHHhhhcC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQ-------------PSPVLDWMTRVRIVVDALRGLEYLHEKV   67 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~~~~~~~~~~i~~~l~~lh~~~   67 (111)
                      ++||||+++++++...+....+++++..+.+...+....             ....++..++..++.|++.|+.|+|+. 
T Consensus        65 l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~-  143 (283)
T cd05048          65 LQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH-  143 (283)
T ss_pred             cCCcccceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC-
Confidence            579999999999987766656666655444433332211             113478888999999999999999999 


Q ss_pred             CCCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           68 QPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        68 ~~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                        +++|+|++|+|          ++|||+++...............++..|+||
T Consensus       144 --~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  195 (283)
T cd05048         144 --HFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPP  195 (283)
T ss_pred             --CeeccccccceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCH
Confidence              99999999999          4799988755433221112233456778887

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.67  E-value=1.7e-16  Score=95.12  Aligned_cols=102  Identities=24%  Similarity=0.323  Sum_probs=77.3

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+....+++++..+++...+..   ...++...+..++.|++.|+.|+|+..  +++|+|++++|
T Consensus        60 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~N  134 (331)
T cd06649          60 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKE---AKRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSN  134 (331)
T ss_pred             CCCCCCCeEEEEEEECCEEEEEeecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhh
Confidence            5799999999999987766667677666555444432   233788889999999999999999851  59999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||++.......    .....++..|+||
T Consensus       135 il~~~~~~~kl~Dfg~~~~~~~~~----~~~~~g~~~y~aP  171 (331)
T cd06649         135 ILVNSRGEIKLCDFGVSGQLIDSM----ANSFVGTRSYMSP  171 (331)
T ss_pred             EEEcCCCcEEEccCcccccccccc----cccCCCCcCcCCH
Confidence                      48999887553322    2344678889887

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.66  E-value=2.5e-17  Score=96.20  Aligned_cols=107  Identities=27%  Similarity=0.286  Sum_probs=79.3

Q ss_pred             CCCccceeeeeeeee-CCccchhhhhhhhh--hcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCC
Q 047898            1 LKHENLVELLGYCVE-GNLRDELIWIIHVI--TCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIR   77 (111)
Q Consensus         1 l~h~~iv~l~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~   77 (111)
                      |+|||||.+..+|.+ ......+++|.++-  ....+.. ......++...+..++.|++.|+.|||++   =++|||+|
T Consensus        84 l~h~nvi~Lv~Vfl~~d~~v~l~fdYAEhDL~~II~fHr-~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLK  159 (438)
T KOG0666|consen   84 LKHPNVISLVKVFLSHDKKVWLLFDYAEHDLWHIIKFHR-ASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLK  159 (438)
T ss_pred             hcCCcchhHHHHHhccCceEEEEehhhhhhHHHHHHHhc-cchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCC
Confidence            589999999999987 33334455555532  2222222 22334688888999999999999999999   99999999


Q ss_pred             CCC--------------cCCCcccccCCCCccccc-ccccCccccccCC
Q 047898           78 SSN--------------IADFNLSNQAPNMAARLH-STRVLGTFSYHAP  111 (111)
Q Consensus        78 ~~n--------------i~~~g~~~~~~~~~~~~~-~~~~~~~~~~~aP  111 (111)
                      |+|              |.|+|++|.+.+.-++.. ....+.|+||.||
T Consensus       160 PaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAP  208 (438)
T KOG0666|consen  160 PANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAP  208 (438)
T ss_pred             cceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecCh
Confidence            999              489999998877655532 3445679999998

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.66  E-value=1.8e-16  Score=92.44  Aligned_cols=108  Identities=23%  Similarity=0.274  Sum_probs=74.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCC--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQ--PSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRS   78 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~   78 (111)
                      ++||||+++++++.+......+++++..+++...+....  .....++..+..++.|++.|+.|+|+.   +++|+|+++
T Consensus        52 l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp  128 (269)
T cd05087          52 LQHSNLLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLAL  128 (269)
T ss_pred             CCCCCEeeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCc
Confidence            579999999999988766656666666555544432211  122356677778899999999999999   999999999


Q ss_pred             CC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           79 SN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        79 ~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +|          ++|||.+................++..|+||
T Consensus       129 ~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  171 (269)
T cd05087         129 RNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAP  171 (269)
T ss_pred             ceEEEcCCCcEEECCccccccccCcceeecCCCcCCcccccCH
Confidence            99          4799987644332211112223456678876

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.66  E-value=1.6e-16  Score=93.00  Aligned_cols=108  Identities=17%  Similarity=0.296  Sum_probs=74.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCC-------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeee
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQP-------SPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQ   73 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h   73 (111)
                      ++|+||+++++++..++....+.+++..+++...+.....       ...+++.++..++.|++.|+.|+|+.   +++|
T Consensus        66 l~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH  142 (277)
T cd05062          66 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVH  142 (277)
T ss_pred             CCCCCeeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---Cccc
Confidence            5799999999999877766666666655544333221111       12357788889999999999999999   9999


Q ss_pred             cCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           74 RDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        74 ~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +|++|+|          ++|||+++...............++..|+||
T Consensus       143 ~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  190 (277)
T cd05062         143 RDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP  190 (277)
T ss_pred             CCcchheEEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcCh
Confidence            9999999          3789987755433221111223346678887

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.66  E-value=8.9e-17  Score=96.06  Aligned_cols=102  Identities=23%  Similarity=0.200  Sum_probs=75.0

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +|++|+++.+++...+...++++++..+.+.....   ....+++.++..++.|++.|+.|+|+.   +++|+|++|+| 
T Consensus        59 ~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~---~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Ni  132 (323)
T cd05615          59 KPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQ---QVGKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNV  132 (323)
T ss_pred             CCCchhheeeEEecCCEEEEEEcCCCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHe
Confidence            35788889999988766556666666554433332   223488999999999999999999999   99999999999 


Q ss_pred             ---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                               ++|||+++........  .....||..|+||
T Consensus       133 ll~~~~~ikL~Dfg~~~~~~~~~~~--~~~~~gt~~y~aP  170 (323)
T cd05615         133 MLDSEGHIKIADFGMCKEHMVDGVT--TRTFCGTPDYIAP  170 (323)
T ss_pred             EECCCCCEEEeccccccccCCCCcc--ccCccCCccccCH
Confidence                     4899988754322211  2345688899987

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.66  E-value=2.6e-16  Score=92.28  Aligned_cols=104  Identities=28%  Similarity=0.301  Sum_probs=76.1

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+|++++++++...+....+++++..+.+......  ....+++..+..++.|++.|+.|+|+.   +++|+|++++|
T Consensus        59 l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~--~~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~n  133 (282)
T cd06643          59 CDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--LERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGN  133 (282)
T ss_pred             CCCCCeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCccc
Confidence            5799999999999887766666666665544333222  123388899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||++.........  .....++..|+||
T Consensus       134 ili~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aP  172 (282)
T cd06643         134 ILFTLDGDIKLADFGVSAKNTRTIQR--RDSFIGTPYWMAP  172 (282)
T ss_pred             EEEccCCCEEEccccccccccccccc--cccccccccccCH
Confidence                      3889987654332211  2234567778877

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.66  E-value=1.5e-16  Score=93.28  Aligned_cols=108  Identities=19%  Similarity=0.246  Sum_probs=72.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcC-------------CCCCCCCCCHHHHHHHHHHHHHHHHHhhhcC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQ-------------GAQPSPVLDWMTRVRIVVDALRGLEYLHEKV   67 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~   67 (111)
                      ++||||+++++++........+.++...+.+...+.             .......+++..+..++.|++.|+.|+|+. 
T Consensus        65 l~h~~iv~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~-  143 (283)
T cd05091          65 LQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH-  143 (283)
T ss_pred             CCCCCcCeEEEEEcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc-
Confidence            579999999999987665544444443332221111             111122378888899999999999999999 


Q ss_pred             CCCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           68 QPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        68 ~~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                        +++|+|++|.|          ++|||+++...............+++.|+||
T Consensus       144 --gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  195 (283)
T cd05091         144 --HVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSP  195 (283)
T ss_pred             --CccccccchhheEecCCCceEecccccccccccchheeeccCccCCccccCH
Confidence              99999999999          4799987765433221112223446678887

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.66  E-value=2.6e-16  Score=92.31  Aligned_cols=105  Identities=22%  Similarity=0.300  Sum_probs=74.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++..+.....+.+++. +.+............++..++..++.|++.|+.|+|+.   +++|+|++++|
T Consensus        56 l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~n  131 (285)
T cd07861          56 LQHPNIVCLQDVLMQESRLYLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQN  131 (285)
T ss_pred             cCCCCEeeeEEEEeeCCeEEEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHH
Confidence            579999999999998665555555554 33333333323334488999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+.........  .....++..|+||
T Consensus       132 il~~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~y~aP  170 (285)
T cd07861         132 LLIDNKGVIKLADFGLARAFGIPVRV--YTHEVVTLWYRAP  170 (285)
T ss_pred             EEEcCCCcEEECcccceeecCCCccc--ccCCcccccccCh
Confidence                      4788887644322111  1223456777776

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.66  E-value=8.6e-17  Score=93.47  Aligned_cols=107  Identities=24%  Similarity=0.377  Sum_probs=75.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||++++|++...+...++++++..+.+.+.+... ....+++.+...++.|++.|+.|+|+.   +++|++++++|
T Consensus        58 l~h~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~-~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~n  133 (259)
T PF07714_consen   58 LRHPNIVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSK-NKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSN  133 (259)
T ss_dssp             HSBTTBE-EEEEEESSSSEEEEEE--TTEBHHHHHHHT-CTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGG
T ss_pred             cccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccc---ccccccccccc
Confidence            47999999999999766666777777777666555443 123388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||++....................|+||
T Consensus       134 ill~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aP  174 (259)
T PF07714_consen  134 ILLDSNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAP  174 (259)
T ss_dssp             EEEETTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-H
T ss_pred             ccccccccccccccccccccccccccccccccccccccccc
Confidence                      4788888766332222112233456677776

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.66  E-value=9.8e-17  Score=94.26  Aligned_cols=104  Identities=18%  Similarity=0.210  Sum_probs=76.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++...+....+++++..+...... .  ....++...+..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        57 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~-~--~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~N  130 (287)
T cd07848          57 LKQENIVELKEAFRRRGKLYLVFEYVEKNMLELLE-E--MPNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPEN  130 (287)
T ss_pred             CCCccccchhhhEecCCEEEEEEecCCCCHHHHHH-h--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHH
Confidence            57999999999998877666666666544322221 1  122378889999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+......... ......++..|+||
T Consensus       131 ill~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aP  170 (287)
T cd07848         131 LLISHNDVLKLCDFGFARNLSEGSNA-NYTEYVATRWYRSP  170 (287)
T ss_pred             EEEcCCCcEEEeeccCcccccccccc-cccccccccccCCc
Confidence                      4799988765432211 12334678889987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.65  E-value=6.9e-17  Score=97.25  Aligned_cols=86  Identities=17%  Similarity=0.144  Sum_probs=68.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++.+.+...++.+++..+.+...+...   ..++...+..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        58 ~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~N  131 (350)
T cd05573          58 ADSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRK---DVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDN  131 (350)
T ss_pred             cCCCCccchhhheecCCeEEEEEcCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHH
Confidence            46999999999998877666666666655554444332   3488899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCC
Q 047898           81 ----------IADFNLSNQAPN   92 (111)
Q Consensus        81 ----------i~~~g~~~~~~~   92 (111)
                                +.|||.+.....
T Consensus       132 Ill~~~~~~kL~Dfg~~~~~~~  153 (350)
T cd05573         132 ILIDADGHIKLADFGLCKKMNK  153 (350)
T ss_pred             eEECCCCCEEeecCCCCccCcc
Confidence                      379998876543

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.65  E-value=1.5e-17  Score=104.81  Aligned_cols=106  Identities=24%  Similarity=0.307  Sum_probs=84.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||+|+|+|+|....+..++.++|.++.+.+.+.+-.+.- ++.-..+.++.||.+|+.||..+   ++||||+-.+|
T Consensus       320 ikHpNLVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRecnr~e-v~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARN  395 (1157)
T KOG4278|consen  320 IKHPNLVQLLGVCTHEPPFYIITEFMCYGNLLDYLRECNRSE-VPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARN  395 (1157)
T ss_pred             hcCccHHHHhhhhccCCCeEEEEecccCccHHHHHHHhchhh-cchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhh
Confidence            689999999999998887788889999988887776554433 66667778899999999999999   99999999998


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                +.|||+++.+..++..- ....--++.|.||
T Consensus       396 CLVgEnhiVKvADFGLsRlMtgDTYTA-HAGAKFPIKWTAP  435 (1157)
T KOG4278|consen  396 CLVGENHIVKVADFGLSRLMTGDTYTA-HAGAKFPIKWTAP  435 (1157)
T ss_pred             ccccccceEEeeccchhhhhcCCceec-ccCccCcccccCc
Confidence                      58999999887775431 2222335678776

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.65  E-value=1.6e-16  Score=94.94  Aligned_cols=101  Identities=23%  Similarity=0.187  Sum_probs=73.3

Q ss_pred             CccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC--
Q 047898            3 HENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN--   80 (111)
Q Consensus         3 h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n--   80 (111)
                      |++|+.+.+++...+...++++++..+++...+.   ....+++.++..++.|++.|+.|+|+.   +++|+|++|+|  
T Consensus        60 ~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~---~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nil  133 (324)
T cd05587          60 PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ---QVGKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVM  133 (324)
T ss_pred             CCceeeeEEEEEcCCEEEEEEcCCCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeE
Confidence            3568889999887766656666665554433332   223378889999999999999999999   99999999999  


Q ss_pred             --------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 --------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 --------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                              ++|||+++........  .....||..|+||
T Consensus       134 l~~~~~~kL~Dfg~~~~~~~~~~~--~~~~~gt~~y~aP  170 (324)
T cd05587         134 LDAEGHIKIADFGMCKENIFGGKT--TRTFCGTPDYIAP  170 (324)
T ss_pred             EcCCCCEEEeecCcceecCCCCCc--eeeecCCccccCh
Confidence                    4899987643322211  2345688899987

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.65  E-value=4.1e-16  Score=91.88  Aligned_cols=108  Identities=20%  Similarity=0.319  Sum_probs=76.8

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCC-------------CCCCCCCHHHHHHHHHHHHHHHHHhhhcC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGA-------------QPSPVLDWMTRVRIVVDALRGLEYLHEKV   67 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~l~~~~~~~~~~~i~~~l~~lh~~~   67 (111)
                      ++|+||+++++++........+++++..+.+...+...             .....+++.++..++.+++.|+.++|++ 
T Consensus        64 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-  142 (291)
T cd05094          64 LQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ-  142 (291)
T ss_pred             CCCCCcceEEEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC-
Confidence            57999999999999877666666666655443332211             1112378899999999999999999999 


Q ss_pred             CCCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           68 QPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        68 ~~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                        +++|+|++|+|          ++|||.+................++..|+||
T Consensus       143 --~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aP  194 (291)
T cd05094         143 --HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPP  194 (291)
T ss_pred             --CeeecccCcceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecCh
Confidence              99999999999          3899988755443221112223456778877

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.65  E-value=3.7e-16  Score=91.95  Aligned_cols=108  Identities=21%  Similarity=0.334  Sum_probs=76.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCC----------CCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQG----------AQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPS   70 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~   70 (111)
                      ++|+||+++++++...+....+++++..+.+...+..          ......+++.++..++.|++.++.|+|++   +
T Consensus        64 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~  140 (288)
T cd05093          64 LQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---H  140 (288)
T ss_pred             CCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---C
Confidence            5799999999999987766666666654444332221          11223489999999999999999999999   9


Q ss_pred             eeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           71 IIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        71 i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      ++|+|++|+|          ++|||.++...............++..|+||
T Consensus       141 i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  191 (288)
T cd05093         141 FVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPP  191 (288)
T ss_pred             eeecccCcceEEEccCCcEEeccCCccccccCCceeecCCCCCccccccCH
Confidence            9999999999          4789988755433221112223345678877

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.65  E-value=3e-16  Score=93.03  Aligned_cols=106  Identities=23%  Similarity=0.297  Sum_probs=76.2

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +|+||+++++++...+....+++++..+++...+.... ...+++.+...++.+++.|+.|+|++   +++|+|++|+| 
T Consensus        97 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Ni  172 (302)
T cd05055          97 NHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKR-ESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNV  172 (302)
T ss_pred             CCCCcceEEEEEecCCceEEEEEcCCCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceE
Confidence            69999999999988776666666665555544433222 22378999999999999999999999   99999999999 


Q ss_pred             ---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                               ++|||.++...............++..|+||
T Consensus       173 l~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  212 (302)
T cd05055         173 LLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAP  212 (302)
T ss_pred             EEcCCCeEEECCCcccccccCCCceeecCCCCcccccCCH
Confidence                     4799988765433221111223445678776

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.65  E-value=2e-16  Score=92.09  Aligned_cols=103  Identities=26%  Similarity=0.313  Sum_probs=76.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+....+.+++..+.+......   ...++..++..++.|++.|+.|+|+.   +++|+|++++|
T Consensus        63 l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~n  136 (267)
T cd06645          63 CKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHV---TGPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGAN  136 (267)
T ss_pred             CCCCCeeeEEEEEEeCCEEEEEEeccCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHH
Confidence            5799999999999887766666666555554443322   22388899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+.........  .....++..|+||
T Consensus       137 ili~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~y~aP  175 (267)
T cd06645         137 ILLTDNGHVKLADFGVSAQITATIAK--RKSFIGTPYWMAP  175 (267)
T ss_pred             EEECCCCCEEECcceeeeEccCcccc--cccccCcccccCh
Confidence                      3789987654332211  2334677888887

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.65  E-value=1e-16  Score=96.06  Aligned_cols=104  Identities=24%  Similarity=0.354  Sum_probs=71.4

Q ss_pred             CCCccceeeeeeeeeCCcc-----chhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecC
Q 047898            1 LKHENLVELLGYCVEGNLR-----DELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRD   75 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~   75 (111)
                      ++||||+++++++......     .++++++. +.+...+   .....+++..+..++.|++.|+.|+|++   +++|+|
T Consensus        56 l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l---~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~d  128 (338)
T cd07859          56 LRHPDIVEIKHIMLPPSRREFKDIYVVFELME-SDLHQVI---KANDDLTPEHHQFFLYQLLRALKYIHTA---NVFHRD  128 (338)
T ss_pred             CCCCCEeeecceEeccCCCCCceEEEEEecCC-CCHHHHH---HhcccCCHHHHHHHHHHHHHHHHHHHHC---CeecCC
Confidence            5799999999998754321     22333332 2222222   2233488999999999999999999999   999999


Q ss_pred             CCCCC----------cCCCcccccCCCCccc-ccccccCccccccCC
Q 047898           76 IRSSN----------IADFNLSNQAPNMAAR-LHSTRVLGTFSYHAP  111 (111)
Q Consensus        76 l~~~n----------i~~~g~~~~~~~~~~~-~~~~~~~~~~~~~aP  111 (111)
                      ++|+|          ++|||.++........ .......++..|+||
T Consensus       129 lkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aP  175 (338)
T cd07859         129 LKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAP  175 (338)
T ss_pred             CCHHHeEECCCCcEEEccCccccccccccCccccccCCCCCCCcCCH
Confidence            99999          4899998755433221 112335688889987

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.65  E-value=1.6e-17  Score=97.33  Aligned_cols=104  Identities=21%  Similarity=0.297  Sum_probs=74.8

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCc
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI   81 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~ni   81 (111)
                      .|+||++++++|++.+...++++-|..++   ++........+.+.++..+...|+.|++|||.+   +|.|||+||+||
T Consensus       134 gh~nilqLiefFEdd~~FYLVfEKm~GGp---lLshI~~~~~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENi  207 (463)
T KOG0607|consen  134 GHKNILQLIEFFEDDTRFYLVFEKMRGGP---LLSHIQKRKHFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENI  207 (463)
T ss_pred             CCccHHHHHHHhcccceEEEEEecccCch---HHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccce
Confidence            48999999999998665544444444443   444444455699999999999999999999999   999999999993


Q ss_pred             -------------CCCcccccCCCCc--cccc---ccccCccccccCC
Q 047898           82 -------------ADFNLSNQAPNMA--ARLH---STRVLGTFSYHAP  111 (111)
Q Consensus        82 -------------~~~g~~~~~~~~~--~~~~---~~~~~~~~~~~aP  111 (111)
                                   +||.+........  ....   ..+.+|+-.||||
T Consensus       208 LC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAP  255 (463)
T KOG0607|consen  208 LCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAP  255 (463)
T ss_pred             eecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcch
Confidence                         6665544333222  1111   2455788889998

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.65  E-value=3.4e-16  Score=91.20  Aligned_cols=105  Identities=15%  Similarity=0.171  Sum_probs=74.1

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++..++...++++++..+.+...+...  ...+++.++..++.|++.|+.|+|++   +++|+|++|+|
T Consensus        63 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~n  137 (266)
T cd05064          63 FDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKH--EGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHK  137 (266)
T ss_pred             CCCCCcCeEEEEEecCCCcEEEEEeCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhh
Confidence            57999999999999877666666666666555444322  22478999999999999999999999   99999999999


Q ss_pred             c----------CCCcccccCCCCcccccccccCccccccCC
Q 047898           81 I----------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 i----------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +          +|||.+......... ......++..|+||
T Consensus       138 ili~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aP  177 (266)
T cd05064         138 VLVNSDLVCKISGFRRLQEDKSEAIY-TTMSGKSPVLWAAP  177 (266)
T ss_pred             EEEcCCCcEEECCCcccccccccchh-cccCCCCceeecCH
Confidence            3          778765443221111 01122345567776

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.65  E-value=3.7e-16  Score=92.14  Aligned_cols=108  Identities=21%  Similarity=0.241  Sum_probs=74.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCC--------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCee
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQ--------PSPVLDWMTRVRIVVDALRGLEYLHEKVQPSII   72 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~   72 (111)
                      ++|+||+++++++........+.+++..+.+...+....        ....+++.++..++.|++.|+.|+|+.   +++
T Consensus        76 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~  152 (296)
T cd05051          76 LSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFV  152 (296)
T ss_pred             cCCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Ccc
Confidence            579999999999987665555555554443333322211        122478999999999999999999999   999


Q ss_pred             ecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           73 QRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        73 h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |+|++|+|          ++|||.++...............++..|+||
T Consensus       153 H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  201 (296)
T cd05051         153 HRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAW  201 (296)
T ss_pred             ccccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCH
Confidence            99999999          3789988755433221112233456678876

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.65  E-value=6.3e-17  Score=88.40  Aligned_cols=103  Identities=24%  Similarity=0.288  Sum_probs=77.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|.|||+++++.-.......++++++.- +.......  +..++...+..++.|++.|+.|+|++   +++|||+||.|
T Consensus        58 lkhknivrl~dvlhsdkkltlvfe~cdqd-lkkyfdsl--ng~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqn  131 (292)
T KOG0662|consen   58 LKHKNIVRLHDVLHSDKKLTLVFEFCDQD-LKKYFDSL--NGDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQN  131 (292)
T ss_pred             hhhcceeehhhhhccCceeEEeHHHhhHH-HHHHHHhc--CCcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcce
Confidence            58999999999988777666666666532 22222222  23378888889999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                +.|||+++.+.....+  .+..+.|.||.+|
T Consensus       132 llin~ngelkladfglarafgipvrc--ysaevvtlwyrpp  170 (292)
T KOG0662|consen  132 LLINRNGELKLADFGLARAFGIPVRC--YSAEVVTLWYRPP  170 (292)
T ss_pred             EEeccCCcEEecccchhhhcCCceEe--eeceeeeeeccCc
Confidence                      4899999877654433  3455678888876

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.64  E-value=3.5e-16  Score=91.78  Aligned_cols=108  Identities=21%  Similarity=0.255  Sum_probs=74.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCC--------------CCCCCCCHHHHHHHHHHHHHHHHHhhhc
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGA--------------QPSPVLDWMTRVRIVVDALRGLEYLHEK   66 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~l~~~~~~~~~~~i~~~l~~lh~~   66 (111)
                      ++||||+++++++..+.....+++++..+.+...+...              .....+++.+...++.+++.|+.|+|++
T Consensus        64 l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~  143 (283)
T cd05090          64 LHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH  143 (283)
T ss_pred             CCCCCeeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc
Confidence            57999999999998877666666665544433322110              1122378888899999999999999999


Q ss_pred             CCCCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           67 VQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        67 ~~~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                         +++|+|++|+|          ++|||++................++..|+||
T Consensus       144 ---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  195 (283)
T cd05090         144 ---FFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPP  195 (283)
T ss_pred             ---CeehhccccceEEEcCCCcEEeccccccccccCCcceecccCCCccceecCh
Confidence               99999999999          4899988765433221112223345567776

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.64  E-value=3.9e-16  Score=92.71  Aligned_cols=103  Identities=22%  Similarity=0.348  Sum_probs=72.8

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++...+....+++++.. .+...+..  ....++..++..++.|++.|+.|+|++   +++|+|++|+|
T Consensus        61 l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~N  134 (309)
T cd07872          61 LKHANIVTLHDIVHTDKSLTLVFEYLDK-DLKQYMDD--CGNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQN  134 (309)
T ss_pred             CCCCCcceEEEEEeeCCeEEEEEeCCCC-CHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHH
Confidence            5799999999999887665555555542 22222111  122378888889999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+.........  .....++..|+||
T Consensus       135 ill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aP  173 (309)
T cd07872         135 LLINERGELKLADFGLARAKSVPTKT--YSNEVVTLWYRPP  173 (309)
T ss_pred             EEECCCCCEEECccccceecCCCccc--cccccccccccCC
Confidence                      4899988654332211  2233567778887

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.64  E-value=3.8e-17  Score=96.19  Aligned_cols=102  Identities=21%  Similarity=0.186  Sum_probs=80.1

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +||.+..+.-.|+......++.++...+.   +.....+...+++++..++...|++++.|||+.   +|+.||+|.+| 
T Consensus       226 ~HPFLt~LKYsFQt~drlCFVMeyanGGe---Lf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENL  299 (516)
T KOG0690|consen  226 RHPFLTSLKYSFQTQDRLCFVMEYANGGE---LFFHLSRERVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENL  299 (516)
T ss_pred             cCcHHHHhhhhhccCceEEEEEEEccCce---EeeehhhhhcccchhhhhhhHHHHHHhhhhhhC---Ceeeeechhhhh
Confidence            68999999888988665545444444433   333334455599999999999999999999999   99999999999 


Q ss_pred             ---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                               |.|||+++.-......  ..+++||+.|+||
T Consensus       300 lLDkDGHIKitDFGLCKE~I~~g~t--~kTFCGTPEYLAP  337 (516)
T KOG0690|consen  300 LLDKDGHIKITDFGLCKEEIKYGDT--TKTFCGTPEYLAP  337 (516)
T ss_pred             eeccCCceEeeecccchhcccccce--eccccCChhhcCc
Confidence                     5899999876555443  5789999999998

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.64  E-value=6e-16  Score=90.66  Aligned_cols=105  Identities=21%  Similarity=0.317  Sum_probs=73.3

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++.. .....+.+++..+.+.+.+...  ...+++..+..++.|++.|+.|+|++   +++|+|++++|
T Consensus        66 l~h~~i~~~~~~~~~-~~~~~v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~n  139 (279)
T cd05057          66 VDHPHVVRLLGICLS-SQVQLITQLMPLGCLLDYVRNH--KDNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARN  139 (279)
T ss_pred             CCCCCcceEEEEEec-CceEEEEecCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcce
Confidence            579999999999987 4344555555555544443322  22378999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.++...............++..|+||
T Consensus       140 il~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~P  180 (279)
T cd05057         140 VLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMAL  180 (279)
T ss_pred             EEEcCCCeEEECCCcccccccCcccceecCCCcccccccCH
Confidence                      4799988765533322111112234567776

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.64  E-value=5e-16  Score=92.06  Aligned_cols=105  Identities=20%  Similarity=0.288  Sum_probs=72.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.... ...+.+++..+.+.......  ...+++..+..++.|++.|+.|+|++   +++|+|++|+|
T Consensus        66 l~h~niv~~~~~~~~~~-~~~v~e~~~~g~l~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~N  139 (303)
T cd05110          66 MDHPHLVRLLGVCLSPT-IQLVTQLMPHGCLLDYVHEH--KDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARN  139 (303)
T ss_pred             CCCCCcccEEEEEcCCC-ceeeehhcCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHhhc---Ceeccccccce
Confidence            57999999999997643 33444555544444333221  22378888999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.++...............++..|+||
T Consensus       140 ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~P  180 (303)
T cd05110         140 VLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMAL  180 (303)
T ss_pred             eeecCCCceEEccccccccccCcccccccCCCccccccCCH
Confidence                      3799988765433221112223345667776

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.64  E-value=1.9e-16  Score=97.99  Aligned_cols=102  Identities=18%  Similarity=0.303  Sum_probs=78.4

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhc--ccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITC--KKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSS   79 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~   79 (111)
                      .|.+||+++++=...   ..+|.+|+.|+.  ...+.....  ..+.-.+.+++.|++.++.+.|..   +|+|.|+||+
T Consensus       418 g~~~IIqL~DYEv~d---~~lYmvmE~Gd~DL~kiL~k~~~--~~~~~~lk~ywkqML~aV~~IH~~---gIVHSDLKPA  489 (677)
T KOG0596|consen  418 GHDKIIQLYDYEVTD---GYLYMVMECGDIDLNKILKKKKS--IDPDWFLKFYWKQMLLAVKTIHQH---GIVHSDLKPA  489 (677)
T ss_pred             CCceEEEEeeeeccC---ceEEEEeecccccHHHHHHhccC--CCchHHHHHHHHHHHHHHHHHHHh---ceeecCCCcc
Confidence            367899999998773   345556665543  333332222  233226788999999999999999   9999999999


Q ss_pred             C---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           80 N---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |         ++|||++..+..++..+...+.+||+.||+|
T Consensus       490 NFLlVkG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsP  530 (677)
T KOG0596|consen  490 NFLLVKGRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSP  530 (677)
T ss_pred             cEEEEeeeEEeeeechhcccCccccceeeccccCcccccCH
Confidence            9         5999999999988877777788999999998

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.64  E-value=5.5e-16  Score=90.81  Aligned_cols=105  Identities=18%  Similarity=0.254  Sum_probs=72.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++.... ...+++++..+.+...+...  ...+++.++..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        66 ~~~~~i~~~~~~~~~~~-~~l~~~~~~~g~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~N  139 (279)
T cd05109          66 VGSPYVCRLLGICLTST-VQLVTQLMPYGCLLDYVREN--KDRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARN  139 (279)
T ss_pred             cCCCCCceEEEEEcCCC-cEEEEEcCCCCCHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---Ceeccccccce
Confidence            47999999999997643 33455555555554444322  23488899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.++...............++..|++|
T Consensus       140 il~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~P  180 (279)
T cd05109         140 VLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMAL  180 (279)
T ss_pred             EEEcCCCcEEECCCCceeecccccceeecCCCccchhhCCH
Confidence                      4899988765432211111112234567776

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.64  E-value=3.4e-16  Score=93.95  Aligned_cols=102  Identities=22%  Similarity=0.311  Sum_probs=76.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||++++++|...+...++++++..+++...+..   ...++...+..++.+++.|+.|+|+..  +++|+|++++|
T Consensus        60 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~N  134 (333)
T cd06650          60 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSN  134 (333)
T ss_pred             CCCCcccceeEEEEECCEEEEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhh
Confidence            5799999999999987766666676665555444432   223788888899999999999999741  69999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||++.......    .....++..|+||
T Consensus       135 ili~~~~~~kL~Dfg~~~~~~~~~----~~~~~~~~~y~aP  171 (333)
T cd06650         135 ILVNSRGEIKLCDFGVSGQLIDSM----ANSFVGTRSYMSP  171 (333)
T ss_pred             EEEcCCCCEEEeeCCcchhhhhhc----cccCCCCccccCH
Confidence                      37899876543221    2234678888887

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.64  E-value=7e-16  Score=89.51  Aligned_cols=75  Identities=16%  Similarity=0.266  Sum_probs=60.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++..+.....+.+++..+.+...+....  ..+++.....++.|++.|+.|+|+.   +++|+|++++|
T Consensus        56 ~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~n  130 (258)
T cd05078          56 LSHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNK--NLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKN  130 (258)
T ss_pred             CCCCChhheeeEEEeCCCcEEEEecCCCCcHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccce
Confidence            479999999999998776666666666665554443322  2378888899999999999999999   99999999999

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.64  E-value=6e-16  Score=91.69  Aligned_cols=107  Identities=25%  Similarity=0.399  Sum_probs=74.7

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCC-------------CCCCCCHHHHHHHHHHHHHHHHHhhhcCC
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQ-------------PSPVLDWMTRVRIVVDALRGLEYLHEKVQ   68 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~~~~~~~~~~i~~~l~~lh~~~~   68 (111)
                      +||||+++++++........+++++..+.+...+....             ....+++.++..++.|++.|+.|+|+.  
T Consensus        79 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~--  156 (304)
T cd05101          79 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ--  156 (304)
T ss_pred             cCCCchheeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC--
Confidence            69999999999988766656666665544433322111             122378888899999999999999999  


Q ss_pred             CCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           69 PSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        69 ~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                       +++|+|++++|          ++|||.++...............++..|+||
T Consensus       157 -givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aP  208 (304)
T cd05101         157 -KCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAP  208 (304)
T ss_pred             -CeeecccccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCc
Confidence             99999999999          4799988766443222112223345668877

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.63  E-value=7.3e-17  Score=100.42  Aligned_cols=99  Identities=23%  Similarity=0.337  Sum_probs=79.8

Q ss_pred             CccceeeeeeeeeCCccchhhhhhh-hhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            3 HENLVELLGYCVEGNLRDELIWIIH-VITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         3 h~~iv~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      |+||++++++|++.+.   ++..++ +++..++.......+.+++.+...++.|++.|+.+||++   +|+|||||-+| 
T Consensus       628 H~NIlKlLdfFEddd~---yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenv  701 (772)
T KOG1152|consen  628 HENILKLLDFFEDDDY---YYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENV  701 (772)
T ss_pred             ccchhhhhheeecCCe---eEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhcccccccc---CceecccccccE
Confidence            9999999999998552   333333 666677777777777799999999999999999999999   99999999999 


Q ss_pred             ---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                               +.|||.+....+..    ...++||..|.||
T Consensus       702 ivd~~g~~klidfgsaa~~ksgp----fd~f~gtv~~aap  737 (772)
T KOG1152|consen  702 IVDSNGFVKLIDFGSAAYTKSGP----FDVFVGTVDYAAP  737 (772)
T ss_pred             EEecCCeEEEeeccchhhhcCCC----cceeeeeccccch
Confidence                     47898877654433    3467899999887

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.63  E-value=6.5e-16  Score=97.07  Aligned_cols=106  Identities=19%  Similarity=0.201  Sum_probs=70.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCC--CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGA--QPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRS   78 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~   78 (111)
                      ++|+||+++++++...+....+.+++.. .+...+...  .........+...++.|++.|+.|+|++   +++|+||||
T Consensus       220 l~HpnIv~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP  295 (501)
T PHA03210        220 LNHENILKIEEILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKL  295 (501)
T ss_pred             CCCCCcCcEeEEEEECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCH
Confidence            5899999999999886654443332211 111111100  0011133556778899999999999999   999999999


Q ss_pred             CC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           79 SN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        79 ~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +|          ++|||+++.+...... ......|+..|+||
T Consensus       296 ~NILl~~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~aP  337 (501)
T PHA03210        296 ENIFLNCDGKIVLGDFGTAMPFEKEREA-FDYGWVGTVATNSP  337 (501)
T ss_pred             HHEEECCCCCEEEEeCCCceecCccccc-ccccccCCcCCCCc
Confidence            99          4899998765433221 12345788999987

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.63  E-value=7.5e-16  Score=89.66  Aligned_cols=106  Identities=19%  Similarity=0.255  Sum_probs=75.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++.+++...+....+.+++..+.+........  ..+++.++..++.+++.|+.++|+.   +++|+|++|+|
T Consensus        62 l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~n  136 (266)
T cd05033          62 FDHPNIIRLEGVVTKSRPVMIITEYMENGSLDKFLREND--GKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARN  136 (266)
T ss_pred             CCCCCcceEeEEEecCCceEEEEEcCCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcce
Confidence            579999999999988766656666655555444433222  2478999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+................++..|+||
T Consensus       137 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~P  177 (266)
T cd05033         137 ILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAP  177 (266)
T ss_pred             EEEcCCCCEEECccchhhcccccccceeccCCCCCccccCh
Confidence                      3789988766422211111122334567776

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.63  E-value=8.8e-16  Score=89.97  Aligned_cols=108  Identities=23%  Similarity=0.280  Sum_probs=71.9

Q ss_pred             CCCccceeeeeeeeeC-CccchhhhhhhhhhcccCcCCCCC-----CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeec
Q 047898            1 LKHENLVELLGYCVEG-NLRDELIWIIHVITCKKGVQGAQP-----SPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQR   74 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~   74 (111)
                      ++|+||+++++++... .....++++...+.+...+.....     ...+++.++..++.+++.|+.|+|+.   +++|+
T Consensus        65 l~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~  141 (280)
T cd05043          65 LSHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHK  141 (280)
T ss_pred             CCCCCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeec
Confidence            5899999999988764 323333344444443333322111     13488999999999999999999999   99999


Q ss_pred             CCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           75 DIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        75 ~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |++++|          ++|||+++.+.............++..|+||
T Consensus       142 di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~ap  188 (280)
T cd05043         142 DIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMAL  188 (280)
T ss_pred             ccCHhhEEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCH
Confidence            999999          4789998765433221111223345567776

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.63  E-value=7.6e-16  Score=90.69  Aligned_cols=108  Identities=18%  Similarity=0.269  Sum_probs=73.5

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCC---------------------CCCCCCCCHHHHHHHHHHHHHH
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQG---------------------AQPSPVLDWMTRVRIVVDALRG   59 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~l~~~~~~~~~~~i~~~   59 (111)
                      ++||||+++++.+...+....+++++..+.+...+..                     ......+++.++..++.|++.|
T Consensus        60 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~  139 (290)
T cd05045          60 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRG  139 (290)
T ss_pred             CCCCCEeeEEEEEecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHH
Confidence            5799999999999877666555565554433322111                     0111237888999999999999


Q ss_pred             HHHhhhcCCCCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           60 LEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        60 l~~lh~~~~~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +.|+|+.   +++|+|++|+|          +.|||+++...............++..|+||
T Consensus       140 l~~LH~~---~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~ap  198 (290)
T cd05045         140 MQYLAEM---KLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAI  198 (290)
T ss_pred             HHHHHHC---CeehhhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCH
Confidence            9999999   99999999999          3799988755433221111222345567766

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.63  E-value=3.5e-16  Score=95.93  Aligned_cols=66  Identities=23%  Similarity=0.390  Sum_probs=49.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           43 VLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        43 ~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      .+++.++..++.|++.|+.|+|+.   +++|+|++++|          ++|||+++...............++..|+||
T Consensus       233 ~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aP  308 (400)
T cd05105         233 GLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAP  308 (400)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceECh
Confidence            367788889999999999999999   99999999999          3799988765433222112223456778887

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.63  E-value=8.1e-16  Score=92.03  Aligned_cols=77  Identities=17%  Similarity=0.219  Sum_probs=62.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||++++++|...+....+.+++..+.+.+....... ..+++.++..++.|++.|+.|+|++   +++|+|++|+|
T Consensus        56 l~hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~N  131 (327)
T cd08227          56 FNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFM-DGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASH  131 (327)
T ss_pred             cCCCCeeeEEEEEEECCEEEEEEeccCCCcHHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhh
Confidence            5899999999999988777777777776665555433222 2378899999999999999999999   99999999999


Q ss_pred             c
Q 047898           81 I   81 (111)
Q Consensus        81 i   81 (111)
                      |
T Consensus       132 i  132 (327)
T cd08227         132 I  132 (327)
T ss_pred             E
Confidence            4

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.62  E-value=7.4e-16  Score=90.78  Aligned_cols=107  Identities=25%  Similarity=0.363  Sum_probs=74.1

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCC-------------CCCCCCCHHHHHHHHHHHHHHHHHhhhcCC
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGA-------------QPSPVLDWMTRVRIVVDALRGLEYLHEKVQ   68 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~   68 (111)
                      +|+||+++++++...+....+++++..+.+...+...             .....+++..+..++.|++.|+.|+|+.  
T Consensus        74 ~h~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~--  151 (293)
T cd05053          74 KHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK--  151 (293)
T ss_pred             CCCCeeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC--
Confidence            6999999999998877665565655544433322110             1223488899999999999999999999  


Q ss_pred             CCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           69 PSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        69 ~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                       +++|+|++|+|          +.|||.++...............++..|+||
T Consensus       152 -~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  203 (293)
T cd05053         152 -KCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAP  203 (293)
T ss_pred             -CccccccceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCH
Confidence             99999999999          4899988765433221111222344567776

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.62  E-value=9e-17  Score=98.95  Aligned_cols=101  Identities=23%  Similarity=0.272  Sum_probs=80.1

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +.|.||+++-.|.+   ...+|..|+.+..+...--.+....++.....+++..+++|++|||++   +|+.||+||+| 
T Consensus       478 ~s~fIvrLYrTfrd---~kyvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENl  551 (732)
T KOG0614|consen  478 RSDFIVRLYRTFRD---SKYVYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENL  551 (732)
T ss_pred             CchHHHHHHHHhcc---chhhhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhc---CceeccCChhhe
Confidence            35788999888887   345566666555555544444444588889999999999999999999   99999999999 


Q ss_pred             ---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                               +.|||+++.+.+..+   +-+++||+.|.||
T Consensus       552 lLd~~Gy~KLVDFGFAKki~~g~K---TwTFcGTpEYVAP  588 (732)
T KOG0614|consen  552 LLDNRGYLKLVDFGFAKKIGSGRK---TWTFCGTPEYVAP  588 (732)
T ss_pred             eeccCCceEEeehhhHHHhccCCc---eeeecCCcccccc
Confidence                     489999998876654   4678999999998

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.62  E-value=5.6e-16  Score=90.56  Aligned_cols=108  Identities=18%  Similarity=0.258  Sum_probs=75.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCC-------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeee
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQ-------PSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQ   73 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h   73 (111)
                      ++|+||+++++++........+.+++..+.+...+....       ....+++.++..++.|++.|+.|+|+.   +++|
T Consensus        66 ~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H  142 (277)
T cd05032          66 FNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVH  142 (277)
T ss_pred             CCCCceeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---Cccc
Confidence            479999999999988776666666655444443332211       122367888999999999999999999   9999


Q ss_pred             cCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           74 RDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        74 ~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +|++|+|          ++|||.++...............++..|+||
T Consensus       143 ~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  190 (277)
T cd05032         143 RDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP  190 (277)
T ss_pred             cccChheEEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCH
Confidence            9999999          4789987655433221112223445667776

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.62  E-value=5.7e-16  Score=91.12  Aligned_cols=104  Identities=22%  Similarity=0.269  Sum_probs=76.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+.+.+.+...+....+++++..+.+...... .+...+++.++..++.|++.|+.|+|+.   +++|+|++++|
T Consensus        57 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~N  132 (285)
T cd05632          57 VNSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYN-MGNPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPEN  132 (285)
T ss_pred             cCCcCceeEEEEEecCCEEEEEEEeccCccHHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHH
Confidence            5799999999999887766566666655544333322 1223489999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+........   .....++..|+||
T Consensus       133 ili~~~~~~kl~Dfg~~~~~~~~~~---~~~~~g~~~~~aP  170 (285)
T cd05632         133 ILLDDYGHIRISDLGLAVKIPEGES---IRGRVGTVGYMAP  170 (285)
T ss_pred             EEECCCCCEEEecCCcceecCCCCc---ccCCCCCcCccCh
Confidence                      478998765432211   2234678888887

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.62  E-value=8.3e-16  Score=90.17  Aligned_cols=108  Identities=19%  Similarity=0.294  Sum_probs=74.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCC------------CCCCCCHHHHHHHHHHHHHHHHHhhhcCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQ------------PSPVLDWMTRVRIVVDALRGLEYLHEKVQ   68 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~l~~~~~~~~~~~i~~~l~~lh~~~~   68 (111)
                      ++|+||+++++++........+++++..+.+...+....            ....+++.++..++.|++.|+.|+|+.  
T Consensus        64 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~--  141 (280)
T cd05092          64 LQHQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL--  141 (280)
T ss_pred             CCCCCCceEEEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC--
Confidence            589999999999988776666666665544433322211            112378899999999999999999999  


Q ss_pred             CCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           69 PSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        69 ~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                       +++|+|++|+|          ++|||.+................++..|+||
T Consensus       142 -~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  193 (280)
T cd05092         142 -HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPP  193 (280)
T ss_pred             -CeecccccHhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCH
Confidence             99999999999          4789887654332211111122345667776

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.62  E-value=2.5e-15  Score=89.51  Aligned_cols=107  Identities=24%  Similarity=0.293  Sum_probs=70.7

Q ss_pred             CCCccceeeeeeeeeCCcc--chhhhhhhhhhcccCc------CCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCee
Q 047898            1 LKHENLVELLGYCVEGNLR--DELIWIIHVITCKKGV------QGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSII   72 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~--~~~~~~~~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~   72 (111)
                      ++||||+++.+++......  ..+++++.. .+...+      ........++...+..++.|++.|+.|+|+.   +++
T Consensus        55 l~h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~iv  130 (317)
T cd07868          55 LKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVL  130 (317)
T ss_pred             cCCCCCcceeeeEecCCCcEEEEEEeccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEE
Confidence            5799999999998754322  122233221 111111      0111222478889999999999999999999   999


Q ss_pred             ecCCCCCC--------------cCCCcccccCCCCcccc-cccccCccccccCC
Q 047898           73 QRDIRSSN--------------IADFNLSNQAPNMAARL-HSTRVLGTFSYHAP  111 (111)
Q Consensus        73 h~~l~~~n--------------i~~~g~~~~~~~~~~~~-~~~~~~~~~~~~aP  111 (111)
                      |+|++|+|              ++|||+++......... ......+|+.|+||
T Consensus       131 HrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aP  184 (317)
T cd07868         131 HRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAP  184 (317)
T ss_pred             cCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCC
Confidence            99999999              37899887654332211 12345678899998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.62  E-value=1.2e-15  Score=88.41  Aligned_cols=105  Identities=22%  Similarity=0.299  Sum_probs=74.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++........+++++..+.+...+....  ..+++.....++.+++.|+.|+|+.   +++|+|++++|
T Consensus        56 l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~n  130 (256)
T cd05114          56 LSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQ--GKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARN  130 (256)
T ss_pred             CCCCCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcce
Confidence            589999999999988776666666666555544433221  2378889999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                +.|||.++........ ......++..|+||
T Consensus       131 i~i~~~~~~kl~d~g~~~~~~~~~~~-~~~~~~~~~~y~aP  170 (256)
T cd05114         131 CLVSSTGVVKVSDFGMTRYVLDDEYT-SSSGAKFPVKWSPP  170 (256)
T ss_pred             EEEcCCCeEEECCCCCccccCCCcee-ccCCCCCchhhCCh
Confidence                      4789887654332211 01122344567776

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.62  E-value=8.6e-16  Score=88.89  Aligned_cols=105  Identities=21%  Similarity=0.236  Sum_probs=75.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++.+++........+++++..+.+....... ....++......++.+++.|+.++|+.   +++|+|+++.|
T Consensus        55 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~n  130 (255)
T cd08219          55 MKHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQ-RGKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKN  130 (255)
T ss_pred             CCCCCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcce
Confidence            57999999999998877666666666554443333221 223378888999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.++........  .....++..|+||
T Consensus       131 ili~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~aP  169 (255)
T cd08219         131 IFLTQNGKVKLGDFGSARLLTSPGAY--ACTYVGTPYYVPP  169 (255)
T ss_pred             EEECCCCcEEEcccCcceeecccccc--cccccCCccccCH
Confidence                      3788887655332211  2234566777776

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>PHA02988 hypothetical protein; Provisional

Probab=99.62  E-value=6.5e-16  Score=90.89  Aligned_cols=101  Identities=12%  Similarity=0.199  Sum_probs=71.9

Q ss_pred             CCCccceeeeeeeee--CC--ccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCC
Q 047898            1 LKHENLVELLGYCVE--GN--LRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDI   76 (111)
Q Consensus         1 l~h~~iv~l~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l   76 (111)
                      ++||||+++++++.+  .+  ....+++++..+.+...+..   ...+++.+...++.+++.|+.++|+..  +++|+|+
T Consensus        75 l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdl  149 (283)
T PHA02988         75 IDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDK---EKDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNL  149 (283)
T ss_pred             cCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhh---CCCCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcC
Confidence            589999999999976  22  22345555555555544432   234788889999999999999999732  7789999


Q ss_pred             CCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           77 RSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        77 ~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +++|          +.|||+++......     ....++..|+||
T Consensus       150 kp~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aP  189 (283)
T PHA02988        150 TSVSFLVTENYKLKIICHGLEKILSSPP-----FKNVNFMVYFSY  189 (283)
T ss_pred             ChhhEEECCCCcEEEcccchHhhhcccc-----ccccCcccccCH
Confidence            9999          47899877543321     223567778877

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.62  E-value=6.6e-16  Score=89.90  Aligned_cols=103  Identities=24%  Similarity=0.311  Sum_probs=74.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+....+.+++..+.+...+..   ...++..+...++.|++.|+.|+|+.   +++|+|+++.|
T Consensus        63 ~~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~n  136 (267)
T cd06646          63 CKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHV---TGPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGAN  136 (267)
T ss_pred             cCCCCeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHH
Confidence            4799999999999887766556566555444433322   22378889999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                +.|||.+.........  .....++..|+||
T Consensus       137 ill~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~y~~P  175 (267)
T cd06646         137 ILLTDNGDVKLADFGVAAKITATIAK--RKSFIGTPYWMAP  175 (267)
T ss_pred             EEECCCCCEEECcCccceeecccccc--cCccccCccccCH
Confidence                      4789987755332211  1233566777776

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.61  E-value=1.4e-15  Score=87.94  Aligned_cols=85  Identities=27%  Similarity=0.442  Sum_probs=65.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++........+.+++..+.+...+..  ....+++.++..++.|++.|+.|+|+.   +++|+|++|.|
T Consensus        50 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~n  124 (252)
T cd05084          50 YSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRT--EGPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARN  124 (252)
T ss_pred             CCCCCcceEEEEEcCCCCeEEEEeeccCCcHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhC---Cccccccchhe
Confidence            5799999999999886655555555554444433322  122378889999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccC
Q 047898           81 ----------IADFNLSNQA   90 (111)
Q Consensus        81 ----------i~~~g~~~~~   90 (111)
                                ++|||.++..
T Consensus       125 il~~~~~~~kl~dfg~~~~~  144 (252)
T cd05084         125 CLVTEKNVLKISDFGMSREE  144 (252)
T ss_pred             EEEcCCCcEEECccccCccc
Confidence                      4889887654

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.61  E-value=6.8e-16  Score=90.42  Aligned_cols=104  Identities=24%  Similarity=0.255  Sum_probs=75.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++.+++..+.....+.+++..+.+.......  ...++..++..++.|++.|+.|+|+.   +++|+|++++|
T Consensus        59 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~n  133 (280)
T cd06611          59 CKHPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLEL--ERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGN  133 (280)
T ss_pred             CCCCceeEEEEEEecCCeEEEEeeccCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhh
Confidence            57999999999999877666666666655554443321  22388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                +.|||.+.........  .....++..|++|
T Consensus       134 ili~~~~~~~l~d~g~~~~~~~~~~~--~~~~~~~~~y~~P  172 (280)
T cd06611         134 ILLTLDGDVKLADFGVSAKNKSTLQK--RDTFIGTPYWMAP  172 (280)
T ss_pred             EEECCCCCEEEccCccchhhcccccc--cceeecchhhcCH
Confidence                      3788876554332221  1233466667766

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.61  E-value=1.1e-15  Score=90.51  Aligned_cols=103  Identities=22%  Similarity=0.339  Sum_probs=72.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++...+....+++++.. .+...+..  ....++...+..++.|++.|+.|+|+.   +++|+|++++|
T Consensus        61 l~h~nI~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~--~~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~N  134 (301)
T cd07873          61 LKHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDD--CGNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQN  134 (301)
T ss_pred             cCCCCcceEEEEEecCCeEEEEEecccc-CHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHH
Confidence            5899999999999887655555555542 22222221  122378888999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+.........  .....++..|+||
T Consensus       135 il~~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~~P  173 (301)
T cd07873         135 LLINERGELKLADFGLARAKSIPTKT--YSNEVVTLWYRPP  173 (301)
T ss_pred             EEECCCCcEEECcCcchhccCCCCCc--ccccceeecccCc
Confidence                      4889987654322211  1223456777776

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.61  E-value=8e-16  Score=99.40  Aligned_cols=103  Identities=24%  Similarity=0.230  Sum_probs=74.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++.......++++++..+.+...+..   ...++...+..++.|++.|+.|||++   +++|+||+|+|
T Consensus        61 l~hp~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~---~~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~N  134 (669)
T cd05610          61 SKSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHI---YGYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDN  134 (669)
T ss_pred             cCCCCcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHH
Confidence            5799999999999887766666666655555444322   22378888999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++........  .....+++.|++|
T Consensus       135 ILl~~~g~vkL~DFGls~~~~~~~~~--~~~~~~t~~~~~p  173 (669)
T cd05610         135 MLISNEGHIKLTDFGLSKVTLNRELN--MMDILTTPSMAKP  173 (669)
T ss_pred             EEEcCCCCEEEEeCCCCccccCCccc--ccccccCccccCc
Confidence                      4799998865433221  2223455555554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.61  E-value=1.6e-15  Score=90.31  Aligned_cols=107  Identities=24%  Similarity=0.382  Sum_probs=73.2

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCC-------------CCCCCCCHHHHHHHHHHHHHHHHHhhhcCC
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGA-------------QPSPVLDWMTRVRIVVDALRGLEYLHEKVQ   68 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~   68 (111)
                      +||||+++++++........+++++..+.+...+...             .....+++.+...++.|++.|+.|+|++  
T Consensus        76 ~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~--  153 (314)
T cd05099          76 KHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR--  153 (314)
T ss_pred             CCCCeeeEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC--
Confidence            5999999999998766555555665554443332211             1123478889999999999999999999  


Q ss_pred             CCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           69 PSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        69 ~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                       +++|+|++++|          ++|||.++...............++..|+||
T Consensus       154 -gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  205 (314)
T cd05099         154 -RCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAP  205 (314)
T ss_pred             -CeeeccccceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCH
Confidence             99999999999          4799988765432221111112234567776

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.61  E-value=7.4e-16  Score=90.66  Aligned_cols=104  Identities=21%  Similarity=0.226  Sum_probs=75.8

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|++++.+.+.+...+...++++++..+++...+.. .+...++..++..++.|++.|+.|+|+.   +++|+|++++|
T Consensus        57 l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~-~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~N  132 (285)
T cd05630          57 VNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYH-MGEAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPEN  132 (285)
T ss_pred             CCCCCeeeeeEEEecCCEEEEEEEecCCCcHHHHHHH-hcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHH
Confidence            5799999999999887665556666655544333322 1223388889999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                +.|||.+........   .....|+..|+||
T Consensus       133 il~~~~~~~~l~Dfg~~~~~~~~~~---~~~~~g~~~y~aP  170 (285)
T cd05630         133 ILLDDHGHIRISDLGLAVHVPEGQT---IKGRVGTVGYMAP  170 (285)
T ss_pred             EEECCCCCEEEeeccceeecCCCcc---ccCCCCCccccCh
Confidence                      378998765432221   1234678888887

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.61  E-value=1.3e-15  Score=89.67  Aligned_cols=108  Identities=19%  Similarity=0.302  Sum_probs=73.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCC-------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeee
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQ-------PSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQ   73 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h   73 (111)
                      ++|+||+++++++..+.....+++++..+.+...+....       .....+...+..++.|++.|+.|+|+.   +++|
T Consensus        66 l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H  142 (288)
T cd05061          66 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVH  142 (288)
T ss_pred             CCCCCeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcC
Confidence            579999999999988776666666665554443332211       122356677888999999999999999   9999


Q ss_pred             cCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           74 RDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        74 ~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +|++|+|          ++|||+++...............++..|+||
T Consensus       143 ~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~p  190 (288)
T cd05061         143 RDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP  190 (288)
T ss_pred             CCCChheEEEcCCCcEEECcCCccccccccccccccCCCcccccccCH
Confidence            9999999          3799988755432221111122345567776

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.61  E-value=1.7e-15  Score=89.48  Aligned_cols=108  Identities=21%  Similarity=0.279  Sum_probs=74.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCC---------CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCe
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGA---------QPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSI   71 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i   71 (111)
                      ++|+|++++++++........+++++..+++...+...         .....+++.+...++.+++.|+.|+|+.   ++
T Consensus        74 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i  150 (295)
T cd05097          74 LKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NF  150 (295)
T ss_pred             CCCCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---Ce
Confidence            58999999999998877666666666554443322111         1112367888999999999999999999   99


Q ss_pred             eecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           72 IQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        72 ~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +|+|++|+|          ++|||.+................++..|+||
T Consensus       151 ~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  200 (295)
T cd05097         151 VHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAW  200 (295)
T ss_pred             eccccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecCh
Confidence            999999999          4789987655432211111223345667776

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.61  E-value=5.8e-16  Score=90.08  Aligned_cols=106  Identities=19%  Similarity=0.305  Sum_probs=76.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCC-CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQ-PSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~   79 (111)
                      ++||||+++++++...+....+++++..+.+........ ....++..++..++.+++.|+.|+|++   +++|+|++++
T Consensus        59 l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~  135 (267)
T cd08228          59 LNHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPA  135 (267)
T ss_pred             CCCcceeeeeeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHH
Confidence            579999999999988766666666665554433332211 223378888999999999999999999   9999999999


Q ss_pred             C----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           80 N----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |          ++|||.+.........  .....++..|+||
T Consensus       136 nil~~~~~~~~l~d~g~~~~~~~~~~~--~~~~~~~~~~~aP  175 (267)
T cd08228         136 NVFITATGVVKLGDLGLGRFFSSKTTA--AHSLVGTPYYMSP  175 (267)
T ss_pred             HEEEcCCCCEEECccccceeccchhHH--HhcCCCCccccCh
Confidence            9          3788887655433221  2234567778877

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.61  E-value=1.6e-15  Score=90.11  Aligned_cols=101  Identities=24%  Similarity=0.322  Sum_probs=75.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHE-KVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~-~~~~~i~h~~l~~~   79 (111)
                      ++||||++++++|...+....+++++..+.+...+..   ...++......++.|++.|+.|+|+ .   +++|+|+++.
T Consensus        56 l~h~~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dl~p~  129 (308)
T cd06615          56 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK---AGRIPENILGKISIAVLRGLTYLREKH---KIMHRDVKPS  129 (308)
T ss_pred             CCCCCCCeEEEEEeeCCEEEEEeeccCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhhC---CEEECCCChH
Confidence            5799999999999987766666676665555444332   2337888899999999999999997 5   8999999999


Q ss_pred             C----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           80 N----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |          ++|||.+.......    .....++..|+||
T Consensus       130 nil~~~~~~~~l~dfg~~~~~~~~~----~~~~~~~~~~~aP  167 (308)
T cd06615         130 NILVNSRGEIKLCDFGVSGQLIDSM----ANSFVGTRSYMSP  167 (308)
T ss_pred             HEEEecCCcEEEccCCCcccccccc----cccCCCCcCccCh
Confidence            9          47888876543221    2234567777776

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.61  E-value=1.3e-15  Score=88.84  Aligned_cols=89  Identities=27%  Similarity=0.386  Sum_probs=62.9

Q ss_pred             CCCccceeeeeeeeeCCc------cchhhhhhhhhhcccCcCC---CCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCe
Q 047898            1 LKHENLVELLGYCVEGNL------RDELIWIIHVITCKKGVQG---AQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSI   71 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~------~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i   71 (111)
                      ++|+||+++++++.....      ...+++++..+++......   ......+++.....++.|++.|+.|+|++   ++
T Consensus        57 l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i  133 (272)
T cd05075          57 FDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SF  133 (272)
T ss_pred             CCCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---Ce
Confidence            589999999998764321      1233344444443322211   11223378899999999999999999999   99


Q ss_pred             eecCCCCCC----------cCCCcccccCCC
Q 047898           72 IQRDIRSSN----------IADFNLSNQAPN   92 (111)
Q Consensus        72 ~h~~l~~~n----------i~~~g~~~~~~~   92 (111)
                      +|+|++|+|          ++|||.++....
T Consensus       134 ~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  164 (272)
T cd05075         134 IHRDLAARNCMLNENMNVCVADFGLSKKIYN  164 (272)
T ss_pred             eccccchhheEEcCCCCEEECCCCcccccCc
Confidence            999999999          489998876543

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.61  E-value=1.1e-15  Score=89.84  Aligned_cols=108  Identities=24%  Similarity=0.318  Sum_probs=73.1

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCC-------------------CCCCCCCCHHHHHHHHHHHHHHHH
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQG-------------------AQPSPVLDWMTRVRIVVDALRGLE   61 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~l~~~~~~~~~~~i~~~l~   61 (111)
                      ++||||+++++++........+++++..+.+...+..                   ......+++.++..++.+++.|+.
T Consensus        65 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~  144 (288)
T cd05050          65 FDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMA  144 (288)
T ss_pred             cCCCchheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHH
Confidence            5799999999999887666566565554433322211                   111233788889999999999999


Q ss_pred             HhhhcCCCCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           62 YLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        62 ~lh~~~~~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      ++|+.   +++|+|++|+|          ++|||.++................+..|+||
T Consensus       145 ~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  201 (288)
T cd05050         145 YLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPP  201 (288)
T ss_pred             HHHhC---CeecccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCH
Confidence            99999   99999999999          4789987755433221111122334557765

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.61  E-value=2e-15  Score=87.99  Aligned_cols=87  Identities=17%  Similarity=0.274  Sum_probs=67.5

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+....+++++..+.+...+...  ...+++.++..++.|++.|+.++|+.   +++|+|++++|
T Consensus        62 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~n  136 (267)
T cd05066          62 FDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKH--DGQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARN  136 (267)
T ss_pred             CCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhc
Confidence            57999999999998776655555665555444443322  22378889999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCC
Q 047898           81 ----------IADFNLSNQAPN   92 (111)
Q Consensus        81 ----------i~~~g~~~~~~~   92 (111)
                                +.|||.+.....
T Consensus       137 ili~~~~~~~l~dfg~~~~~~~  158 (267)
T cd05066         137 ILVNSNLVCKVSDFGLSRVLED  158 (267)
T ss_pred             EEECCCCeEEeCCCCccccccc
Confidence                      379998876544

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.60  E-value=8.1e-16  Score=88.92  Aligned_cols=105  Identities=20%  Similarity=0.245  Sum_probs=77.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||++++++++........+++++..+.+...+... ....++..++..++.+++.|+.|+|+.   +++|+|++++|
T Consensus        56 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~n  131 (256)
T cd08529          56 LDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQ-RGRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLN  131 (256)
T ss_pred             cCCCCeehheeeeccCCEEEEEEEeCCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcce
Confidence            58999999999999877666666666655554443322 123478888999999999999999999   99999999999


Q ss_pred             c----------CCCcccccCCCCcccccccccCccccccCC
Q 047898           81 I----------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 i----------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |          +|||.+.........  .....++..|+||
T Consensus       132 ili~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aP  170 (256)
T cd08529         132 LFLDAYDNVKIGDLGVAKLLSDNTNF--ANTIVGTPYYLSP  170 (256)
T ss_pred             EEEeCCCCEEEcccccceeccCccch--hhccccCccccCH
Confidence            3          788887655433221  2234567778776

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.60  E-value=1.4e-15  Score=88.07  Aligned_cols=105  Identities=19%  Similarity=0.285  Sum_probs=77.1

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++.+.+....+++++..+.+...+.... ...++..++..++.|++.++.++|+.   +++|+|++++|
T Consensus        56 ~~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~n  131 (256)
T cd08221          56 LQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLN  131 (256)
T ss_pred             CCCCCeeEEEeEEecCCeEEEEEEecCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHh
Confidence            579999999999998776666666666555544443222 23478899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+.........  .....++..|+||
T Consensus       132 i~~~~~~~~kl~d~~~~~~~~~~~~~--~~~~~~~~~y~ap  170 (256)
T cd08221         132 IFLTKAGLIKLGDFGISKILGSEYSM--AETVVGTPYYMSP  170 (256)
T ss_pred             EEEeCCCCEEECcCcceEEccccccc--ccccCCCccccCH
Confidence                      4788887655433211  2334567777776

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.60  E-value=2.1e-15  Score=88.89  Aligned_cols=104  Identities=26%  Similarity=0.265  Sum_probs=73.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++.+++...+...++++++..+.+.......  ...+++.++..++.|++.++.++|+.   +++|+|++++|
T Consensus        66 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~N  140 (292)
T cd06644          66 CNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLEL--DRGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGN  140 (292)
T ss_pred             CCCCcEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcce
Confidence            57999999999998776555555655544433222221  22378899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+.........  .....++..|+||
T Consensus       141 ili~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aP  179 (292)
T cd06644         141 VLLTLDGDIKLADFGVSAKNVKTLQR--RDSFIGTPYWMAP  179 (292)
T ss_pred             EEEcCCCCEEEccCccceeccccccc--cceecCCccccCc
Confidence                      4789887643322111  1233456677776

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.60  E-value=1.6e-15  Score=93.08  Aligned_cols=66  Identities=24%  Similarity=0.442  Sum_probs=48.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           43 VLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        43 ~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      .+++.++..++.|++.|+.|+|+.   +++|+|++++|          ++|||+++...............++..|+||
T Consensus       235 ~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aP  310 (401)
T cd05107         235 ALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAP  310 (401)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeCh
Confidence            367778888999999999999999   99999999999          3789988754332221111223456778876

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.60  E-value=1.6e-15  Score=88.03  Aligned_cols=106  Identities=19%  Similarity=0.237  Sum_probs=75.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++...+....+++++..+++...+... ....+++.++..++.+++.|+.|+|+.   +++|+|++|+|
T Consensus        58 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~n  133 (261)
T cd05072          58 LQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSD-EGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAAN  133 (261)
T ss_pred             CCCCCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC---Ceeccccchhh
Confidence            57999999999998877666666666655554444322 223378888899999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                +.|||.++........ ......++..|+||
T Consensus       134 ili~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aP  173 (261)
T cd05072         134 VLVSESLMCKIADFGLARVIEDNEYT-AREGAKFPIKWTAP  173 (261)
T ss_pred             EEecCCCcEEECCCccceecCCCcee-ccCCCccceecCCH
Confidence                      4789988765432211 01122345567776

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.60  E-value=1.7e-15  Score=89.00  Aligned_cols=103  Identities=29%  Similarity=0.451  Sum_probs=69.5

Q ss_pred             CCCccceeeeeeeeeCCc-----cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecC
Q 047898            1 LKHENLVELLGYCVEGNL-----RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRD   75 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~   75 (111)
                      ++||||+++++++.....     ...+++++. +.+...+.. .....++..++..++.|++.|+.|+|+.   +++|+|
T Consensus        59 ~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~d  133 (288)
T cd07863          59 FDHPNIVRLMDVCATSRTDRETKVTLVFEHVD-QDLRTYLDK-VPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRD  133 (288)
T ss_pred             cCCCCeeeeeeeeccccCCCCceEEEEEcccc-cCHHHHHHh-cCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCC
Confidence            369999999999875321     122223332 122222222 1223388999999999999999999999   999999


Q ss_pred             CCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           76 IRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        76 l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      ++|+|          ++|||+++.......   .....++..|+||
T Consensus       134 ikp~Nili~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aP  176 (288)
T cd07863         134 LKPENILVTSGGQVKLADFGLARIYSCQMA---LTPVVVTLWYRAP  176 (288)
T ss_pred             CCHHHEEECCCCCEEECccCccccccCccc---CCCccccccccCc
Confidence            99999          489998875532211   2234567888887

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.60  E-value=9.4e-16  Score=93.19  Aligned_cols=103  Identities=27%  Similarity=0.365  Sum_probs=70.1

Q ss_pred             CCCccceeeeeeeeeCC-----ccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecC
Q 047898            1 LKHENLVELLGYCVEGN-----LRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRD   75 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~   75 (111)
                      ++|+||+++++++...+     ....+.+++. +.+....   .....++...+..++.|++.|+.|+|+.   +++|+|
T Consensus        56 l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~---~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~d  128 (372)
T cd07853          56 FKHDNVLSALDILQPPHIDPFEEIYVVTELMQ-SDLHKII---VSPQPLSSDHVKVFLYQILRGLKYLHSA---GILHRD  128 (372)
T ss_pred             CCCCCcCCHhheecCCCccccceEEEEeeccc-cCHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCC
Confidence            58999999999998654     1222223322 1111111   2233488999999999999999999999   999999


Q ss_pred             CCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           76 IRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        76 l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      ++|+|          ++|||+++........ ......++..|+||
T Consensus       129 lkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~-~~~~~~~~~~y~aP  173 (372)
T cd07853         129 IKPGNLLVNSNCVLKICDFGLARVEEPDESK-HMTQEVVTQYYRAP  173 (372)
T ss_pred             CChHHEEECCCCCEEeccccceeecccCccc-cCCCCCcCCCcCCH
Confidence            99999          4899988754332211 12233567788886

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.60  E-value=1.9e-15  Score=90.69  Aligned_cols=107  Identities=27%  Similarity=0.396  Sum_probs=73.6

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCC-------------CCCCCCCHHHHHHHHHHHHHHHHHhhhcCC
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGA-------------QPSPVLDWMTRVRIVVDALRGLEYLHEKVQ   68 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~   68 (111)
                      +|+||++++++|...+....+++++..+.+...+...             .....+++.+...++.|++.|+.|+|+.  
T Consensus        76 ~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~--  153 (334)
T cd05100          76 KHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ--  153 (334)
T ss_pred             CCCCeeeeeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC--
Confidence            6999999999998876555666666555443333221             1122378888899999999999999999  


Q ss_pred             CCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           69 PSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        69 ~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                       +++|+|++|+|          ++|||.++...............++..|+||
T Consensus       154 -givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  205 (334)
T cd05100         154 -KCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAP  205 (334)
T ss_pred             -CeeccccccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCH
Confidence             99999999999          4789988755432211111122334567776

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.60  E-value=2.2e-15  Score=87.40  Aligned_cols=87  Identities=23%  Similarity=0.405  Sum_probs=69.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++...+....+++++..+++........ ...+++.+...++.+++.|+.|+|+.   +++|+|++++|
T Consensus        59 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~n  134 (261)
T cd05148          59 LRHKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPE-GQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARN  134 (261)
T ss_pred             CCCcchhheeeeEecCCCeEEEEeecccCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcce
Confidence            579999999999988776666667666655555544332 23478899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCC
Q 047898           81 ----------IADFNLSNQAP   91 (111)
Q Consensus        81 ----------i~~~g~~~~~~   91 (111)
                                ++|||.+....
T Consensus       135 ilv~~~~~~kl~d~g~~~~~~  155 (261)
T cd05148         135 ILVGEDLVCKVADFGLARLIK  155 (261)
T ss_pred             EEEcCCceEEEccccchhhcC
Confidence                      47898876554

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.60  E-value=2.7e-15  Score=88.65  Aligned_cols=89  Identities=20%  Similarity=0.336  Sum_probs=66.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCC--------CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCee
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGA--------QPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSII   72 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~   72 (111)
                      ++|+||+++++++........+++++..+.+...+...        .....+++.+...++.|++.|+.|+|+.   +++
T Consensus        76 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~  152 (296)
T cd05095          76 LKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFV  152 (296)
T ss_pred             CCCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---Cee
Confidence            57999999999998877665666655544443322211        1122367888999999999999999999   999


Q ss_pred             ecCCCCCC----------cCCCcccccCCC
Q 047898           73 QRDIRSSN----------IADFNLSNQAPN   92 (111)
Q Consensus        73 h~~l~~~n----------i~~~g~~~~~~~   92 (111)
                      |+|++|+|          +.|||.++....
T Consensus       153 H~dlkp~Nili~~~~~~~l~dfg~~~~~~~  182 (296)
T cd05095         153 HRDLATRNCLVGKNYTIKIADFGMSRNLYS  182 (296)
T ss_pred             cccCChheEEEcCCCCEEeccCcccccccC
Confidence            99999999          379998875543

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.60  E-value=2.2e-15  Score=87.39  Aligned_cols=105  Identities=22%  Similarity=0.280  Sum_probs=72.5

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++........+.+++..+.+...+...  ...+++.++..++.|++.|+.|+|+.   +++|+|+++.|
T Consensus        56 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~n  130 (256)
T cd05113          56 LSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREH--GKRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARN  130 (256)
T ss_pred             CCCCCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcce
Confidence            58999999999998766555555555444444333221  12478899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.++........ ......++..|++|
T Consensus       131 ili~~~~~~kl~d~g~~~~~~~~~~~-~~~~~~~~~~y~~p  170 (256)
T cd05113         131 CLVDDQGCVKVSDFGLSRYVLDDEYT-SSVGSKFPVRWSPP  170 (256)
T ss_pred             EEEcCCCCEEECCCccceecCCCcee-ecCCCccChhhCCH
Confidence                      4788887654332211 01112344556665

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.60  E-value=2.5e-15  Score=87.25  Aligned_cols=86  Identities=21%  Similarity=0.335  Sum_probs=64.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++... ....+.+++..+++...+..  ....+++.++..++.|++.|+.|+|++   +++|+|++|+|
T Consensus        52 l~h~~ii~~~~~~~~~-~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~n  125 (257)
T cd05115          52 LDNPYIVRMIGVCEAE-ALMLVMEMASGGPLNKFLSG--KKDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARN  125 (257)
T ss_pred             cCCCCeEEEEEEEcCC-CeEEEEEeCCCCCHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhc---Ceeecccchhe
Confidence            5799999999998643 23444455555444443322  123488999999999999999999999   99999999999


Q ss_pred             c----------CCCcccccCCC
Q 047898           81 I----------ADFNLSNQAPN   92 (111)
Q Consensus        81 i----------~~~g~~~~~~~   92 (111)
                      +          +|||++.....
T Consensus       126 il~~~~~~~kl~dfg~~~~~~~  147 (257)
T cd05115         126 VLLVNQHYAKISDFGLSKALGA  147 (257)
T ss_pred             EEEcCCCcEEeccCCccccccC
Confidence            3          79998875443

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.60  E-value=8.3e-16  Score=96.47  Aligned_cols=108  Identities=19%  Similarity=0.228  Sum_probs=73.9

Q ss_pred             CCCccceeeeeeeeeCCcc--------chhhhhhhhhhcccCcCC-CCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCe
Q 047898            1 LKHENLVELLGYCVEGNLR--------DELIWIIHVITCKKGVQG-AQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSI   71 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i   71 (111)
                      ++|+|++++.+.+......        ..+++++..+++...+.. ......++...+..++.|++.|+.|+|+.   ++
T Consensus        88 ~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~I  164 (496)
T PTZ00283         88 CDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HM  164 (496)
T ss_pred             CCCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CE
Confidence            4689999998877643321        123344444444333321 11233488889999999999999999999   99


Q ss_pred             eecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           72 IQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        72 ~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +|+|++|+|          ++|||+++...............||+.|+||
T Consensus       165 iHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aP  214 (496)
T PTZ00283        165 IHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAP  214 (496)
T ss_pred             ecCCCCHHHEEEeCCCCEEEEecccCeeccccccccccccccCCcceeCH
Confidence            999999999          4899998765433222123456789999998

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.60  E-value=2e-15  Score=87.32  Aligned_cols=108  Identities=25%  Similarity=0.353  Sum_probs=77.8

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCC------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeec
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQP------SPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQR   74 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~   74 (111)
                      ++|+|++++++++.......++.+++..+++...+.....      ...+++.+...++.|++.|+.++|+.   +++|+
T Consensus        53 ~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~  129 (262)
T cd00192          53 LGHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHR  129 (262)
T ss_pred             cCCCChheeeeeecCCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccC
Confidence            4799999999999986655566666655555444433211      24489999999999999999999999   99999


Q ss_pred             CCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           75 DIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        75 ~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |++|+|          ++|||.+................++..|+||
T Consensus       130 di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  176 (262)
T cd00192         130 DLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAP  176 (262)
T ss_pred             ccCcceEEECCCCcEEEcccccccccccccccccccCCCcCccccCH
Confidence            999999          3789888766543211112234456778876

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.60  E-value=1.4e-15  Score=88.67  Aligned_cols=106  Identities=27%  Similarity=0.377  Sum_probs=73.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++..++....+++++..+.+...+.........+...+..++.|++.|+.|+|+.   +++|+|++++|
T Consensus        62 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~n  138 (268)
T cd06624          62 LKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDN  138 (268)
T ss_pred             cCCCCeeeeeeeeccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHH
Confidence            589999999999988776666666665555544443221111127778888999999999999999   99999999999


Q ss_pred             -----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 -----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 -----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                 ++|||.+.........  .....++..|+||
T Consensus       139 il~~~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~aP  178 (268)
T cd06624         139 VLVNTYSGVVKISDFGTSKRLAGINPC--TETFTGTLQYMAP  178 (268)
T ss_pred             EEEcCCCCeEEEecchhheecccCCCc--cccCCCCccccCh
Confidence                       3678776654332211  2233466777776

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.60  E-value=1.9e-15  Score=88.10  Aligned_cols=89  Identities=26%  Similarity=0.411  Sum_probs=64.0

Q ss_pred             CCCccceeeeeeeeeCCc------cchhhhhhhhhhcccCcCCC---CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCe
Q 047898            1 LKHENLVELLGYCVEGNL------RDELIWIIHVITCKKGVQGA---QPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSI   71 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i   71 (111)
                      ++|+||+++++++...+.      ...+.+++..+++...+...   .....+++..+..++.|++.|+.|+|+.   ++
T Consensus        58 l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i  134 (273)
T cd05035          58 FDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NF  134 (273)
T ss_pred             CCCCCeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence            579999999998876543      22333444444433222111   1223488889999999999999999999   99


Q ss_pred             eecCCCCCC----------cCCCcccccCCC
Q 047898           72 IQRDIRSSN----------IADFNLSNQAPN   92 (111)
Q Consensus        72 ~h~~l~~~n----------i~~~g~~~~~~~   92 (111)
                      +|+|++|+|          ++|||.++....
T Consensus       135 ~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~  165 (273)
T cd05035         135 IHRDLAARNCMLREDMTVCVADFGLSKKIYS  165 (273)
T ss_pred             eccccchheEEECCCCeEEECCccceeeccc
Confidence            999999999          489998876543

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.60  E-value=2.4e-15  Score=88.09  Aligned_cols=87  Identities=26%  Similarity=0.354  Sum_probs=66.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCC----CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQ----PSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDI   76 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l   76 (111)
                      ++|+||+++++++.+......+++++..+.+...+....    ....+++.++..++.|++.|+.|+|+.   +++|+|+
T Consensus        66 l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dl  142 (277)
T cd05036          66 FNHQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDI  142 (277)
T ss_pred             CCCCCEeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccc
Confidence            579999999999988766655656655544443332211    122488899999999999999999999   9999999


Q ss_pred             CCCCc-------------CCCcccccC
Q 047898           77 RSSNI-------------ADFNLSNQA   90 (111)
Q Consensus        77 ~~~ni-------------~~~g~~~~~   90 (111)
                      +++||             +|||.++..
T Consensus       143 kp~nil~~~~~~~~~~kl~dfg~~~~~  169 (277)
T cd05036         143 AARNCLLTCKGPGRVAKIADFGMARDI  169 (277)
T ss_pred             chheEEEeccCCCcceEeccCcccccc
Confidence            99993             678877655

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.60  E-value=3.3e-15  Score=88.90  Aligned_cols=107  Identities=24%  Similarity=0.301  Sum_probs=70.5

Q ss_pred             CCCccceeeeeeeeeCCcc--chhhhhhhhhhcccCc------CCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCee
Q 047898            1 LKHENLVELLGYCVEGNLR--DELIWIIHVITCKKGV------QGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSII   72 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~--~~~~~~~~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~   72 (111)
                      ++||||+++.+++......  ..+++++.. .+....      ........+++..+..++.|++.|+.|+|+.   +++
T Consensus        55 l~h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~iv  130 (317)
T cd07867          55 LKHPNVIALQKVFLSHSDRKVWLLFDYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVL  130 (317)
T ss_pred             CCCCCeeeEEEEEeccCCCeEEEEEeeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEE
Confidence            5799999999998653322  223333321 111111      1111223478888999999999999999999   999


Q ss_pred             ecCCCCCC--------------cCCCcccccCCCCcccc-cccccCccccccCC
Q 047898           73 QRDIRSSN--------------IADFNLSNQAPNMAARL-HSTRVLGTFSYHAP  111 (111)
Q Consensus        73 h~~l~~~n--------------i~~~g~~~~~~~~~~~~-~~~~~~~~~~~~aP  111 (111)
                      |+|++|+|              ++|||+++......... ......+|..|+||
T Consensus       131 H~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aP  184 (317)
T cd07867         131 HRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAP  184 (317)
T ss_pred             cCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCc
Confidence            99999999              37899887654332211 12345678889988

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.60  E-value=2.8e-15  Score=87.98  Aligned_cols=103  Identities=20%  Similarity=0.255  Sum_probs=74.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+|++++.+++..+.....+++++..+.+.....   ....+++.++..++.|++.|+.|+|+.   +++|+|++++|
T Consensus        57 ~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~---~~~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~n  130 (286)
T cd07847          57 LKHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEK---NPRGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPEN  130 (286)
T ss_pred             CCCCCEeeeeeEEeeCCEEEEEEeccCccHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhh
Confidence            579999999999998776666666666544333222   122388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+.........  .....++..|+||
T Consensus       131 il~~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~aP  169 (286)
T cd07847         131 ILITKQGQIKLCDFGFARILTGPGDD--YTDYVATRWYRAP  169 (286)
T ss_pred             EEEcCCCcEEECccccceecCCCccc--ccCcccccccCCH
Confidence                      4889888765433211  1223455666665

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.60  E-value=9.7e-16  Score=100.72  Aligned_cols=87  Identities=21%  Similarity=0.285  Sum_probs=65.1

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCC--------CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCee
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGA--------QPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSII   72 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~   72 (111)
                      ++||||+++++++.+++....+++++..+++...+...        ......++..+..++.|++.|+.|+|+.   +++
T Consensus        59 L~HPNIVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GII  135 (932)
T PRK13184         59 LIHPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVL  135 (932)
T ss_pred             CCCcCcCeEEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---Ccc
Confidence            57999999999998877666666666555443332211        0112255677888999999999999999   999


Q ss_pred             ecCCCCCCc----------CCCcccccC
Q 047898           73 QRDIRSSNI----------ADFNLSNQA   90 (111)
Q Consensus        73 h~~l~~~ni----------~~~g~~~~~   90 (111)
                      |||+||+||          +|||.++..
T Consensus       136 HRDLKPeNILLd~dg~vKLiDFGLAk~i  163 (932)
T PRK13184        136 HRDLKPDNILLGLFGEVVILDWGAAIFK  163 (932)
T ss_pred             ccCCchheEEEcCCCCEEEEecCcceec
Confidence            999999993          789988755

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.59  E-value=2.8e-15  Score=87.20  Aligned_cols=106  Identities=23%  Similarity=0.306  Sum_probs=74.3

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++...+....+.+++..+.+...+... ....+++..+..++.|++.|+.++|+.   +++|+|++|+|
T Consensus        59 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~n  134 (263)
T cd05052          59 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARN  134 (263)
T ss_pred             CCCCChhheEEEEcCCCCcEEEEEeCCCCcHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcce
Confidence            57999999999998766555565666555554443322 223378888999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+......... .......+..|+||
T Consensus       135 il~~~~~~~kl~df~~~~~~~~~~~~-~~~~~~~~~~y~aP  174 (263)
T cd05052         135 CLVGENHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTAP  174 (263)
T ss_pred             EEEcCCCcEEeCCCccccccccceee-ccCCCCCccccCCH
Confidence                      4899987765433211 01112234557776

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.59  E-value=1.3e-15  Score=98.16  Aligned_cols=104  Identities=26%  Similarity=0.356  Sum_probs=80.6

Q ss_pred             CCccceeeeeeeee-----CCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCC
Q 047898            2 KHENLVELLGYCVE-----GNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDI   76 (111)
Q Consensus         2 ~h~~iv~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l   76 (111)
                      .|||++.++|+|..     +++.+++.+++..|+.-++..... ...+.+.-...++..++.|+.+||..   .++|||+
T Consensus        74 ~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDi  149 (953)
T KOG0587|consen   74 HHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHNN---KVIHRDI  149 (953)
T ss_pred             CCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecc
Confidence            59999999999974     344555666665554444433333 23378888888999999999999999   9999999


Q ss_pred             CCCCc----------CCCcccccCCCCcccccccccCccccccCC
Q 047898           77 RSSNI----------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        77 ~~~ni----------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +..||          .|||+++++.++...  ..+.+||+.||||
T Consensus       150 kG~NiLLT~e~~VKLvDFGvSaQldsT~gr--RnT~iGtP~WMAP  192 (953)
T KOG0587|consen  150 KGQNVLLTENAEVKLVDFGVSAQLDSTVGR--RNTFIGTPYWMAP  192 (953)
T ss_pred             cCceEEEeccCcEEEeeeeeeeeeeccccc--ccCcCCCcccccc
Confidence            99994          799999988776555  4667899999998

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.59  E-value=2.1e-15  Score=89.56  Aligned_cols=107  Identities=26%  Similarity=0.398  Sum_probs=73.6

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCC-------------CCCCCCHHHHHHHHHHHHHHHHHhhhcCC
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQ-------------PSPVLDWMTRVRIVVDALRGLEYLHEKVQ   68 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~~~~~~~~~~i~~~l~~lh~~~~   68 (111)
                      +|+||+++++++...+....+++++..+.+...+....             ....+++.++..++.|++.|+.|+|+.  
T Consensus        82 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~--  159 (307)
T cd05098          82 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK--  159 (307)
T ss_pred             CCCCEeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC--
Confidence            69999999999988776666666655544433332211             112378889999999999999999999  


Q ss_pred             CCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           69 PSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        69 ~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                       +++|+|++|+|          ++|||.+................++..|+||
T Consensus       160 -gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aP  211 (307)
T cd05098         160 -KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP  211 (307)
T ss_pred             -CcccccccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeCh
Confidence             99999999999          3789887655432211001112234568876

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.59  E-value=2.5e-15  Score=86.99  Aligned_cols=74  Identities=18%  Similarity=0.286  Sum_probs=58.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.. .....+++++..+.+...+.....  .++...+..++.|++.|+.|+|++   +++|+|++|+|
T Consensus        58 l~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~N  131 (259)
T cd05037          58 LSHKHLVKLYGVCVR-DENIMVEEYVKFGPLDVFLHREKN--NVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKN  131 (259)
T ss_pred             CCCcchhheeeEEec-CCcEEEEEcCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccce
Confidence            579999999999987 445555566665555444433221  478888999999999999999999   99999999999

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.59  E-value=2.6e-15  Score=87.89  Aligned_cols=108  Identities=22%  Similarity=0.360  Sum_probs=75.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGA-----------QPSPVLDWMTRVRIVVDALRGLEYLHEKVQP   69 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~   69 (111)
                      ++|+||+++++++........+++++..+.+...+...           .....+++.++..++.|++.|+.++|++   
T Consensus        65 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---  141 (280)
T cd05049          65 FQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---  141 (280)
T ss_pred             cCCCCchheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---
Confidence            57999999999999877666666666554443332211           1123378888999999999999999999   


Q ss_pred             CeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           70 SIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        70 ~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +++|+|++|+|          ++|||.++...............+++.|+||
T Consensus       142 ~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aP  193 (280)
T cd05049         142 HFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPP  193 (280)
T ss_pred             CeeccccccceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecCh
Confidence            99999999999          3789987654332211111223346678877

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.59  E-value=3e-15  Score=87.35  Aligned_cols=105  Identities=23%  Similarity=0.364  Sum_probs=74.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+|++++++++...+....+++++..+++...+...   ..++...+..++.|++.|+.++|+.   +++|+|++++|
T Consensus        65 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~n  138 (272)
T cd06629          65 LDHLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTY---GRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADN  138 (272)
T ss_pred             cCCCCcceEEEEeccCCceEEEEecCCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhh
Confidence            57999999999998876665666666655544443322   3378888889999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+................++..|+||
T Consensus       139 il~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~P  179 (272)
T cd06629         139 LLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAP  179 (272)
T ss_pred             EEEcCCCeEEEeeccccccccccccccccccccCCccccCH
Confidence                      3788887654332211112223456667766

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.59  E-value=9.6e-16  Score=92.61  Aligned_cols=102  Identities=26%  Similarity=0.372  Sum_probs=68.9

Q ss_pred             CCCccceeeeeeeeeCCcc---chhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCC
Q 047898            1 LKHENLVELLGYCVEGNLR---DELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIR   77 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~   77 (111)
                      ++||||+++++++......   ..++.+++.... ......  ...++..++..++.|++.|+.|+|+.   +++|+|++
T Consensus        73 l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDik  146 (355)
T cd07874          73 VNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVI--QMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLK  146 (355)
T ss_pred             hCCCchhceeeeeeccccccccceeEEEhhhhcc-cHHHHH--hhcCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCC
Confidence            4799999999998754321   112222222211 111111  12278888899999999999999999   99999999


Q ss_pred             CCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           78 SSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        78 ~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |+|          ++|||+++.......   .....+|..|+||
T Consensus       147 p~Nill~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aP  187 (355)
T cd07874         147 PSNIVVKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYYRAP  187 (355)
T ss_pred             hHHEEECCCCCEEEeeCcccccCCCccc---cCCccccCCccCH
Confidence            999          489999875433221   2345678889987

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.59  E-value=1.7e-15  Score=88.54  Aligned_cols=102  Identities=27%  Similarity=0.381  Sum_probs=69.7

Q ss_pred             CCCccceeeeeeeeeCCccch---hhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDE---LIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIR   77 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~   77 (111)
                      ++|+||++++.+|...+....   ++.+++.++..   ......-.++..++..++.|.+.|+.++|+.   +|+|||+|
T Consensus        72 v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~~n---l~~vi~~elDH~tis~i~yq~~~~ik~lhs~---~IihRdLk  145 (369)
T KOG0665|consen   72 VNHKNIISLLNVFTPQKTLEEFQEVYLVMELMDAN---LCQVILMELDHETISYILYQMLCGIKHLHSA---GIIHRDLK  145 (369)
T ss_pred             hcccceeeeeeccCccccHHHHHhHHHHHHhhhhH---HHHHHHHhcchHHHHHHHHHHHHHHHHHHhc---ceeecccC
Confidence            589999999999986443322   33333322211   1111112277788999999999999999999   99999999


Q ss_pred             CCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           78 SSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        78 ~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |+|          |.|||.++....+   ...+..+.+..|.||
T Consensus       146 Psnivv~~~~~lKi~dfg~ar~e~~~---~~mtpyVvtRyyrap  186 (369)
T KOG0665|consen  146 PSNIVVNSDCTLKILDFGLARTEDTD---FMMTPYVVTRYYRAP  186 (369)
T ss_pred             cccceecchhheeeccchhhcccCcc---cccCchhheeeccCc
Confidence            999          4899998765433   112344566777776

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.59  E-value=3.6e-15  Score=87.45  Aligned_cols=97  Identities=25%  Similarity=0.301  Sum_probs=72.8

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+....+.+++..+.+...       ..+++..+..++.|++.|+.|+|+.   +++|+|++++|
T Consensus        56 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~N  125 (279)
T cd06619          56 CDSPYIIGFYGAFFVENRISICTEFMDGGSLDVY-------RKIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSN  125 (279)
T ss_pred             CCCCCeeeEEEEEEECCEEEEEEecCCCCChHHh-------hcCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHH
Confidence            5799999999999987766555555554433211       1267888889999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||++.......    .....++..|+||
T Consensus       126 ill~~~~~~~l~dfg~~~~~~~~~----~~~~~~~~~y~aP  162 (279)
T cd06619         126 MLVNTRGQVKLCDFGVSTQLVNSI----AKTYVGTNAYMAP  162 (279)
T ss_pred             EEECCCCCEEEeeCCcceeccccc----ccCCCCChhhcCc
Confidence                      48999886553322    2234677788877

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.59  E-value=2.5e-15  Score=87.12  Aligned_cols=104  Identities=27%  Similarity=0.347  Sum_probs=73.5

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.......+++++...+.+.......  ...++..++..++.|++.|+.|+|+.   +++|+|++++|
T Consensus        57 ~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~n  131 (262)
T cd06613          57 CRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVT--RGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGAN  131 (262)
T ss_pred             CCCCChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhh
Confidence            58999999999998876555555555444433332221  12378899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+.........  .....++..|+||
T Consensus       132 i~i~~~~~~~l~d~g~~~~~~~~~~~--~~~~~~~~~y~~P  170 (262)
T cd06613         132 ILLTEDGDVKLADFGVSAQLTATIAK--RKSFIGTPYWMAP  170 (262)
T ss_pred             EEECCCCCEEECccccchhhhhhhhc--cccccCCccccCc
Confidence                      4788887654432211  1233566677776

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.59  E-value=1.9e-15  Score=89.35  Aligned_cols=102  Identities=25%  Similarity=0.352  Sum_probs=75.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++.+.+..+.....+++++..+.+.....    ...+++.+...++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        74 ~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~----~~~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~N  146 (296)
T cd06654          74 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT----ETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDN  146 (296)
T ss_pred             CCCCCEeeEEEEEEeCCEEEEeecccCCCCHHHHHH----hcCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHH
Confidence            479999999999988776666767766555544332    12378889999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+.........  .....+++.|+||
T Consensus       147 ill~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aP  185 (296)
T cd06654         147 ILLGMDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAP  185 (296)
T ss_pred             EEEcCCCCEEECccccchhccccccc--cCcccCCccccCH
Confidence                      4889887654332211  1234567778876

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.58  E-value=1.6e-15  Score=91.83  Aligned_cols=102  Identities=26%  Similarity=0.363  Sum_probs=68.4

Q ss_pred             CCCccceeeeeeeeeCCcc---chhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCC
Q 047898            1 LKHENLVELLGYCVEGNLR---DELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIR   77 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~   77 (111)
                      ++||||+++++++......   ..++.+++.... ......  ...++..++..++.|++.|+.|+|+.   +++|+|++
T Consensus        77 l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~--~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlk  150 (359)
T cd07876          77 VNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVI--HMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLK  150 (359)
T ss_pred             CCCCCEeeeeeeeccCCCccccceeEEEEeCCCc-CHHHHH--hccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCC
Confidence            5799999999998754321   112222222211 111111  12277888889999999999999999   99999999


Q ss_pred             CCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           78 SSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        78 ~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |+|          ++|||+++.......   .....+|..|+||
T Consensus       151 p~NIl~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aP  191 (359)
T cd07876         151 PSNIVVKSDCTLKILDFGLARTACTNFM---MTPYVVTRYYRAP  191 (359)
T ss_pred             HHHEEECCCCCEEEecCCCccccccCcc---CCCCcccCCCCCc
Confidence            999          489998875433221   2334678889987

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.58  E-value=1.8e-15  Score=88.78  Aligned_cols=100  Identities=17%  Similarity=0.189  Sum_probs=74.3

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +|+||+.+.+++...+....+++++..+.+...+.   ....+++.++..++.|++.|+.|+|+.   +++|+|++++| 
T Consensus        55 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~---~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Ni  128 (279)
T cd05633          55 DCPFIVCMTYAFHTPDKLCFILDLMNGGDLHYHLS---QHGVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANI  128 (279)
T ss_pred             CCCcEeEEEEEEecCCeEEEEEecCCCCCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHE
Confidence            58999999999987665556666666555433332   223489999999999999999999999   99999999999 


Q ss_pred             ---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                               ++|||++.......    .....++..|+||
T Consensus       129 l~~~~~~~~l~dfg~~~~~~~~~----~~~~~~~~~y~aP  164 (279)
T cd05633         129 LLDEHGHVRISDLGLACDFSKKK----PHASVGTHGYMAP  164 (279)
T ss_pred             EECCCCCEEEccCCcceeccccC----ccCcCCCcCccCH
Confidence                     37899876443221    1223577888887

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.58  E-value=1.1e-15  Score=89.61  Aligned_cols=103  Identities=22%  Similarity=0.282  Sum_probs=72.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++.+......+.+++.. .+...+..  ....+++.++..++.|++.|+.|+|+.   +++|+|++++|
T Consensus        56 l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~n  129 (284)
T cd07839          56 LKHKNIVRLYDVLHSDKKLTLVFEYCDQ-DLKKYFDS--CNGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQN  129 (284)
T ss_pred             cCCCCeeeHHHHhccCCceEEEEecCCC-CHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHH
Confidence            5799999999999887655555555542 22222211  123388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.++........  .....++..|+||
T Consensus       130 il~~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~y~aP  168 (284)
T cd07839         130 LLINKNGELKLADFGLARAFGIPVRC--YSAEVVTLWYRPP  168 (284)
T ss_pred             EEEcCCCcEEECccchhhccCCCCCC--cCCCccccCCcCh
Confidence                      4899987754332211  1223456778877

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.58  E-value=2.9e-15  Score=88.47  Aligned_cols=103  Identities=29%  Similarity=0.377  Sum_probs=74.1

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++.+......+++++ .+.+...+....  ..+++..+..++.|++.|+.|+|+.   +++|+|++++|
T Consensus        59 ~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~n  132 (298)
T cd07841          59 LKHPNIIGLLDVFGHKSNINLVFEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNN  132 (298)
T ss_pred             cCCCCChhhhheeecCCEEEEEEccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhh
Confidence            57999999999999866566666666 444443333221  2488999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+.........  .....++..|+||
T Consensus       133 ill~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~y~aP  171 (298)
T cd07841         133 LLIASDGVLKLADFGLARSFGSPNRK--MTHQVVTRWYRAP  171 (298)
T ss_pred             EEEcCCCCEEEccceeeeeccCCCcc--ccccccceeeeCH
Confidence                      4788887665433221  1222345566665

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.58  E-value=6.9e-15  Score=85.43  Aligned_cols=87  Identities=22%  Similarity=0.370  Sum_probs=67.8

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++...+....+.+++..+.+........ ...+++.++..++.+++.|+.++|+.   +++|+|++++|
T Consensus        58 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~N  133 (261)
T cd05068          58 LRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARN  133 (261)
T ss_pred             CCCCCccceeEEEecCCCeeeeeecccCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcce
Confidence            579999999999988766656666655555544433222 23478999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCC
Q 047898           81 ----------IADFNLSNQAP   91 (111)
Q Consensus        81 ----------i~~~g~~~~~~   91 (111)
                                ++|||.+....
T Consensus       134 il~~~~~~~~l~dfg~~~~~~  154 (261)
T cd05068         134 VLVGENNICKVADFGLARVIK  154 (261)
T ss_pred             EEEcCCCCEEECCcceEEEcc
Confidence                      48898877654

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.58  E-value=3.2e-15  Score=87.67  Aligned_cols=100  Identities=17%  Similarity=0.202  Sum_probs=74.9

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +||+|+.+.+++...+....+++++..+.+...+.   ....+++.++..++.|++.|+.|+|+.   +++|+|++++| 
T Consensus        55 ~~~~i~~~~~~~~~~~~~~~v~e~~~g~~L~~~l~---~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~ni  128 (278)
T cd05606          55 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS---QHGVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANI  128 (278)
T ss_pred             CCCcEeeeeeeeecCCEEEEEEecCCCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHE
Confidence            58999999999988776666666666554433332   223489999999999999999999999   99999999999 


Q ss_pred             ---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                               ++|||.+.......    .....++..|+||
T Consensus       129 li~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~y~aP  164 (278)
T cd05606         129 LLDEHGHVRISDLGLACDFSKKK----PHASVGTHGYMAP  164 (278)
T ss_pred             EECCCCCEEEccCcCccccCccC----CcCcCCCcCCcCc
Confidence                     47999876543222    1234577888887

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.58  E-value=2.7e-15  Score=96.30  Aligned_cols=106  Identities=18%  Similarity=0.277  Sum_probs=69.8

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCC-CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGA-QPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      +|||||++++.-.+..+..+..+.+. +.+.+..... ................|++.|+++||+.   +++|||+||.|
T Consensus       561 ~H~NviRyyc~E~d~qF~YIalELC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQN  636 (903)
T KOG1027|consen  561 EHPNVIRYYCSEQDRQFLYIALELCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQN  636 (903)
T ss_pred             CCCceEEEEeeccCCceEEEEehHhh-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCce
Confidence            69999999887666554433333332 1222221111 0000011123456678999999999999   99999999999


Q ss_pred             ---------------cCCCcccccCCCCcccc-cccccCccccccCC
Q 047898           81 ---------------IADFNLSNQAPNMAARL-HSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------------i~~~g~~~~~~~~~~~~-~~~~~~~~~~~~aP  111 (111)
                                     |+|||+++.+....... ..++..||-.|+||
T Consensus       637 ILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~AP  683 (903)
T KOG1027|consen  637 ILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAP  683 (903)
T ss_pred             EEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCH
Confidence                           48999999887765432 24567799999998

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.58  E-value=3e-15  Score=87.48  Aligned_cols=107  Identities=22%  Similarity=0.345  Sum_probs=73.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCC------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeec
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQP------SPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQR   74 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~   74 (111)
                      ++|+||+++++++........+++++..+.+...+.....      ...+++.++..++.|++.++.|+|++   +++|+
T Consensus        65 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~  141 (275)
T cd05046          65 LSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHR  141 (275)
T ss_pred             cCCcceeeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccC
Confidence            5799999999999876666666666655555444433221      11488999999999999999999999   99999


Q ss_pred             CCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           75 DIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        75 ~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |++|+|          +++||++......... ......++..|++|
T Consensus       142 dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~y~~P  187 (275)
T cd05046         142 DLAARNCLVSSQREVKVSLLSLSKDVYNSEYY-KLRNALIPLRWLAP  187 (275)
T ss_pred             cCccceEEEeCCCcEEEcccccccccCccccc-ccCCceeEEeecCh
Confidence            999999          3677776543222111 11222345557665

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.58  E-value=2.7e-15  Score=88.37  Aligned_cols=100  Identities=23%  Similarity=0.279  Sum_probs=74.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++..+.....+.+++..+.+...+..   ...++..+...++.|++.|+.++|+.   +++|+|++|+|
T Consensus        58 l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~---~~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~n  131 (290)
T cd05580          58 IRHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRK---SGRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPEN  131 (290)
T ss_pred             CCCCCccceeeEEEcCCeEEEEEecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHH
Confidence            5799999999999887666566666655544333322   23488889999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                +.|||++......     .....+++.|+||
T Consensus       132 ili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aP  167 (290)
T cd05580         132 LLLDSDGYIKITDFGFAKRVKGR-----TYTLCGTPEYLAP  167 (290)
T ss_pred             EEECCCCCEEEeeCCCccccCCC-----CCCCCCCccccCh
Confidence                      3788887665433     1233567777776

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.58  E-value=1.7e-15  Score=91.14  Aligned_cols=101  Identities=31%  Similarity=0.461  Sum_probs=68.2

Q ss_pred             CCCccceeeeeeeeeCCcc---chhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCC
Q 047898            1 LKHENLVELLGYCVEGNLR---DELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIR   77 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~   77 (111)
                      ++|+||+++++++......   ...+..++.. ... +........++..++..++.|++.|+.|+|+.   +++|+|++
T Consensus        71 l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdik  145 (343)
T cd07878          71 MKHENVIGLLDVFTPATSIENFNEVYLVTNLM-GAD-LNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLK  145 (343)
T ss_pred             cCCCchhhhhhhhcccccccccCcEEEEeecC-CCC-HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCC
Confidence            5799999999988643221   1111222211 111 11111123388999999999999999999999   99999999


Q ss_pred             CCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           78 SSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        78 ~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |+|          ++|||++......     .....++..|+||
T Consensus       146 p~Nil~~~~~~~kl~Dfg~~~~~~~~-----~~~~~~t~~y~aP  184 (343)
T cd07878         146 PSNVAVNEDCELRILDFGLARQADDE-----MTGYVATRWYRAP  184 (343)
T ss_pred             hhhEEECCCCCEEEcCCccceecCCC-----cCCccccccccCc
Confidence            999          4899988754332     2234678888887

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.58  E-value=1.6e-15  Score=88.25  Aligned_cols=106  Identities=19%  Similarity=0.314  Sum_probs=75.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCC-CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGA-QPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~   79 (111)
                      ++|+||+++++++..++....+++++..+.+...+... .....+++.+...++.+++.|+.|+|+.   +++|+|++++
T Consensus        59 ~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~  135 (267)
T cd08229          59 LNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPA  135 (267)
T ss_pred             ccCCchhhhhheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHH
Confidence            57999999999998877666666665544443333211 1223478899999999999999999999   9999999999


Q ss_pred             C----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           80 N----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |          ++|||.+.........  .....++..|+||
T Consensus       136 nili~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~ap  175 (267)
T cd08229         136 NVFITATGVVKLGDLGLGRFFSSKTTA--AHSLVGTPYYMSP  175 (267)
T ss_pred             HEEEcCCCCEEECcchhhhccccCCcc--cccccCCcCccCH
Confidence            9          3788877655433221  2233566777776

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.57  E-value=4e-15  Score=86.25  Aligned_cols=86  Identities=23%  Similarity=0.293  Sum_probs=66.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++...+....+.+++..+.+.+.+...  ...+++.....++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        56 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~n  130 (256)
T cd05059          56 LSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRER--KGKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARN  130 (256)
T ss_pred             CCCCCEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhh
Confidence            57999999999998776555555555544444333221  22478899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCC
Q 047898           81 ----------IADFNLSNQAP   91 (111)
Q Consensus        81 ----------i~~~g~~~~~~   91 (111)
                                ++|||.++...
T Consensus       131 i~i~~~~~~kl~dfg~~~~~~  151 (256)
T cd05059         131 CLVGEDNVVKVSDFGLARYVL  151 (256)
T ss_pred             EEECCCCcEEECCcccceecc
Confidence                      48899877554

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.57  E-value=5.8e-15  Score=86.97  Aligned_cols=103  Identities=24%  Similarity=0.314  Sum_probs=70.8

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++.+++..++....+++++. +.+......  ....++..++..++.|++.|+.|+|+.   +++|+|++++|
T Consensus        60 l~h~ni~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~N  133 (291)
T cd07870          60 LKHANIVLLHDIIHTKETLTFVFEYMH-TDLAQYMIQ--HPGGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQN  133 (291)
T ss_pred             cCCCCEeEEEEEEecCCeEEEEEeccc-CCHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHH
Confidence            579999999999987665555555553 222222211  122367788888999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.++........  .....++..|+||
T Consensus       134 il~~~~~~~~l~Dfg~~~~~~~~~~~--~~~~~~~~~y~aP  172 (291)
T cd07870         134 LLISYLGELKLADFGLARAKSIPSQT--YSSEVVTLWYRPP  172 (291)
T ss_pred             EEEcCCCcEEEeccccccccCCCCCC--CCCccccccccCC
Confidence                      3789987654332211  1223456777776

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.57  E-value=2.5e-15  Score=87.23  Aligned_cols=105  Identities=24%  Similarity=0.365  Sum_probs=74.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+....+++++..+.+...+..   ...++......++.+++.|+.++|+.   +++|+|++++|
T Consensus        61 l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~n  134 (263)
T cd06625          61 LQHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKA---YGALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGAN  134 (263)
T ss_pred             CCCCCeeeeEEEEccCCeEEEEEEECCCCcHHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHH
Confidence            5799999999999987755555555554443333222   23377888899999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCccccc-ccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLH-STRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~-~~~~~~~~~~~aP  111 (111)
                                ++|||.++.......... .....++..|+||
T Consensus       135 ilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aP  176 (263)
T cd06625         135 ILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSP  176 (263)
T ss_pred             EEEcCCCCEEEeecccceeccccccccccccCCCcCccccCc
Confidence                      478988765443221110 1234566778877

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.57  E-value=4.6e-15  Score=90.74  Aligned_cols=108  Identities=22%  Similarity=0.304  Sum_probs=79.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      |+||-||+++++|.-.+..+.  .+++++..+++-.+..-+...++.++..++.||+.++.||-.. +++|||-|++|.|
T Consensus       524 LDHpRIVKlYDyfslDtdsFC--TVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgN  600 (775)
T KOG1151|consen  524 LDHPRIVKLYDYFSLDTDSFC--TVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGN  600 (775)
T ss_pred             cCcceeeeeeeeeeeccccce--eeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCcc
Confidence            689999999999986554333  2333333333333334444588899999999999999999886 6689999999999


Q ss_pred             -------------cCCCcccccCCCCcccc-----cccccCccccccCC
Q 047898           81 -------------IADFNLSNQAPNMAARL-----HSTRVLGTFSYHAP  111 (111)
Q Consensus        81 -------------i~~~g~~~~~~~~~~~~-----~~~~~~~~~~~~aP  111 (111)
                                   |.|||+++.+..+....     .++...||.||++|
T Consensus       601 ILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPP  649 (775)
T KOG1151|consen  601 ILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPP  649 (775)
T ss_pred             EEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCc
Confidence                         48999999876554321     14557899999987

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.57  E-value=1e-15  Score=90.39  Aligned_cols=102  Identities=24%  Similarity=0.388  Sum_probs=75.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++.+..++....+++++..+.+.....    ...+++.+...++.|++.|+.|+|+.   +++|+|++++|
T Consensus        76 l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~----~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~N  148 (292)
T cd06658          76 YHHENVVDMYNSYLVGDELWVVMEFLEGGALTDIVT----HTRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDS  148 (292)
T ss_pred             CCCCcHHHHHHheecCCeEEEEEeCCCCCcHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHH
Confidence            579999999999988776666666666554433321    12378889999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                +.|||.+.........  .....++..|+||
T Consensus       149 ill~~~~~~kL~dfg~~~~~~~~~~~--~~~~~~~~~y~aP  187 (292)
T cd06658         149 ILLTSDGRIKLSDFGFCAQVSKEVPK--RKSLVGTPYWMAP  187 (292)
T ss_pred             EEEcCCCCEEEccCcchhhccccccc--CceeecCccccCH
Confidence                      4889887654332211  2234567778887

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.57  E-value=5.8e-15  Score=86.01  Aligned_cols=87  Identities=18%  Similarity=0.271  Sum_probs=68.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+|++++.+++...+....+++++..+.+...+...  ...+++.+...++.+++.|+.|+|+.   +++|+|++++|
T Consensus        63 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~N  137 (268)
T cd05063          63 FSHHNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDH--DGEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARN  137 (268)
T ss_pred             CCCCCeeEEEEEEccCCCcEEEEEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---Ceeccccchhh
Confidence            57999999999998877666666666555554443322  23478899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCC
Q 047898           81 ----------IADFNLSNQAPN   92 (111)
Q Consensus        81 ----------i~~~g~~~~~~~   92 (111)
                                ++|||++.....
T Consensus       138 ili~~~~~~kl~dfg~~~~~~~  159 (268)
T cd05063         138 ILVNSNLECKVSDFGLSRVLED  159 (268)
T ss_pred             EEEcCCCcEEECCCccceeccc
Confidence                      389998875543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.57  E-value=1.7e-15  Score=96.91  Aligned_cols=107  Identities=22%  Similarity=0.271  Sum_probs=83.3

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCC------C-----C--CCCCHHHHHHHHHHHHHHHHHhhhcCC
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQ------P-----S--PVLDWMTRVRIVVDALRGLEYLHEKVQ   68 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-----~--~~l~~~~~~~~~~~i~~~l~~lh~~~~   68 (111)
                      +|+||+.+.|+|..++....+.++...+.+..++...+      .     .  ..++......++.||+.|+.||.+.  
T Consensus       360 ~H~niv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~--  437 (609)
T KOG0200|consen  360 KHPNIVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV--  437 (609)
T ss_pred             CCcchhhheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC--
Confidence            69999999999999777778888888887776665443      0     0  1278888999999999999999999  


Q ss_pred             CCeeecCCCCCC----------cCCCcccccCCCCcccccc-cccCccccccCC
Q 047898           69 PSIIQRDIRSSN----------IADFNLSNQAPNMAARLHS-TRVLGTFSYHAP  111 (111)
Q Consensus        69 ~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~-~~~~~~~~~~aP  111 (111)
                       +++|||+-.+|          |+|||+++........... ....-+..||||
T Consensus       438 -~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmAp  490 (609)
T KOG0200|consen  438 -PCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAP  490 (609)
T ss_pred             -CccchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCH
Confidence             99999999999          5999999976655444211 111146679998

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.57  E-value=2.5e-15  Score=89.13  Aligned_cols=102  Identities=21%  Similarity=0.201  Sum_probs=83.9

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +||.+|-+..+|++....+++.+++..+++.--++..+   .++++.+.++...|+.++.|+|+.   +|+.||+|..| 
T Consensus       309 n~pflvglhscfqtesrlffvieyv~ggdlmfhmqrqr---klpeeharfys~ei~lal~flh~r---giiyrdlkldnv  382 (593)
T KOG0695|consen  309 NNPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNV  382 (593)
T ss_pred             CCCeEEehhhhhcccceEEEEEEEecCcceeeehhhhh---cCcHHHhhhhhHHHHHHHHHHhhc---Ceeeeeccccce
Confidence            58999999999998887777777777776655554433   389999999999999999999999   99999999999 


Q ss_pred             ---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                               +.|+|.++.-......  +++++||+.|.||
T Consensus       383 lldaeghikltdygmcke~l~~gd~--tstfcgtpnyiap  420 (593)
T KOG0695|consen  383 LLDAEGHIKLTDYGMCKEGLGPGDT--TSTFCGTPNYIAP  420 (593)
T ss_pred             EEccCCceeecccchhhcCCCCCcc--cccccCCCcccch
Confidence                     3789988765444433  6789999999998

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.57  E-value=3.3e-15  Score=88.62  Aligned_cols=85  Identities=28%  Similarity=0.403  Sum_probs=65.2

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCC-------------CCCCCCCHHHHHHHHHHHHHHHHHhhhcCC
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGA-------------QPSPVLDWMTRVRIVVDALRGLEYLHEKVQ   68 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~   68 (111)
                      +|+||+++++++...+....+.+++..+.+...+...             .....++..++..++.|++.|+.|+|+.  
T Consensus        66 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~--  143 (303)
T cd05088          66 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK--  143 (303)
T ss_pred             CCCCcceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC--
Confidence            7999999999998877666666665554443333211             1123478899999999999999999999  


Q ss_pred             CCeeecCCCCCC----------cCCCccccc
Q 047898           69 PSIIQRDIRSSN----------IADFNLSNQ   89 (111)
Q Consensus        69 ~~i~h~~l~~~n----------i~~~g~~~~   89 (111)
                       +++|+|++|+|          ++|||.+..
T Consensus       144 -gi~H~dlkp~Nili~~~~~~kl~dfg~~~~  173 (303)
T cd05088         144 -QFIHRDLAARNILVGENYVAKIADFGLSRG  173 (303)
T ss_pred             -CccccccchheEEecCCCcEEeCccccCcc
Confidence             99999999999          488998753

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.57  E-value=5.5e-15  Score=88.92  Aligned_cols=66  Identities=23%  Similarity=0.367  Sum_probs=50.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           43 VLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        43 ~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      .+++..+..++.|++.|+.|+|++   +++|+|++|+|          ++|||+++.+.............++..|+||
T Consensus       169 ~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aP  244 (337)
T cd05054         169 PLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP  244 (337)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCc
Confidence            478888999999999999999999   99999999999          3899998766443322112233455678887

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.57  E-value=6.9e-15  Score=85.76  Aligned_cols=86  Identities=19%  Similarity=0.278  Sum_probs=67.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++.+++.+.+....+.+++..+.+...+...  ...+++.++..++.|++.|+.++|++   +++|+|++++|
T Consensus        62 l~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~n  136 (269)
T cd05065          62 FDHPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQN--DGQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARN  136 (269)
T ss_pred             CCCcCcceEEEEECCCCceEEEEecCCCCcHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChhe
Confidence            57999999999998877666666666555444433322  23478899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCC
Q 047898           81 ----------IADFNLSNQAP   91 (111)
Q Consensus        81 ----------i~~~g~~~~~~   91 (111)
                                +.|||.+....
T Consensus       137 ili~~~~~~kl~dfg~~~~~~  157 (269)
T cd05065         137 ILVNSNLVCKVSDFGLSRFLE  157 (269)
T ss_pred             EEEcCCCcEEECCCccccccc
Confidence                      37888876543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.57  E-value=3.8e-15  Score=86.67  Aligned_cols=105  Identities=26%  Similarity=0.420  Sum_probs=74.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++.+++...+....+++++..+.+...+..   ...++..++..++.|++.|+.++|+.   +++|+|++|+|
T Consensus        63 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~n  136 (267)
T cd06628          63 LQHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNN---YGAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGAN  136 (267)
T ss_pred             cCCCCeeeEEEEEEeCCccEEEEEecCCCCHHHHHHh---ccCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHH
Confidence            5799999999999887655555565554443333322   23378888899999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccc----cccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARL----HSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~----~~~~~~~~~~~~aP  111 (111)
                                ++|||.++.........    ......++..|+||
T Consensus       137 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~p  181 (267)
T cd06628         137 ILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAP  181 (267)
T ss_pred             EEEcCCCCEEecccCCCcccccccccCCccccccccCCCcCccCh
Confidence                      47898877654221110    01223466677776

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.57  E-value=4.7e-15  Score=85.88  Aligned_cols=106  Identities=24%  Similarity=0.329  Sum_probs=74.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++.. .....+.+++..+.+...+..... ..+++.....++.|++.|+.++|+.   +++|+|++|+|
T Consensus        53 l~h~~iv~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~n  127 (257)
T cd05040          53 LDHENLIRLYGVVLT-HPLMMVTELAPLGSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARN  127 (257)
T ss_pred             cCCCCccceeEEEcC-CeEEEEEEecCCCcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCccc
Confidence            579999999999887 444455555554544444333221 3478999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCccc-ccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAAR-LHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~-~~~~~~~~~~~~~aP  111 (111)
                                ++|||.++........ .......++..|+||
T Consensus       128 il~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~p  169 (257)
T cd05040         128 ILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAP  169 (257)
T ss_pred             EEEecCCEEEeccccccccccccccceecccCCCCCceecCH
Confidence                      4899988766442211 011123455667776

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.57  E-value=5.3e-15  Score=87.20  Aligned_cols=103  Identities=23%  Similarity=0.308  Sum_probs=71.7

Q ss_pred             CCCccceeeeeeeeeC--CccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 047898            1 LKHENLVELLGYCVEG--NLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRS   78 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~   78 (111)
                      ++||||+++.+++...  ....++++++.. .+...+...  ...+++.+...++.|++.|+.|+|+.   +++|+|+++
T Consensus        61 l~h~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p  134 (293)
T cd07843          61 LQHPNIVTVKEVVVGSNLDKIYMVMEYVEH-DLKSLMETM--KQPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKT  134 (293)
T ss_pred             cCCCCEEEEEEEEEecCCCcEEEEehhcCc-CHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCH
Confidence            5799999999999876  434444454432 222222221  12488999999999999999999999   999999999


Q ss_pred             CC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           79 SN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        79 ~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +|          +.|||.+.........  .....++..|+||
T Consensus       135 ~nili~~~~~~~l~d~g~~~~~~~~~~~--~~~~~~~~~~~aP  175 (293)
T cd07843         135 SNLLLNNRGILKICDFGLAREYGSPLKP--YTQLVVTLWYRAP  175 (293)
T ss_pred             HHEEECCCCcEEEeecCceeeccCCccc--cccccccccccCc
Confidence            99          3788887765443211  1223456778877

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.57  E-value=3.7e-15  Score=88.15  Aligned_cols=102  Identities=25%  Similarity=0.391  Sum_probs=75.5

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+|++++++++...+....+++++..+.+.....    ...+++.++..++.+++.|+.++|+.   +++|+|++++|
T Consensus        73 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~----~~~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~N  145 (296)
T cd06655          73 LKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVT----ETCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDN  145 (296)
T ss_pred             cCCCceeeeeeeEecCceEEEEEEecCCCcHHHHHH----hcCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHH
Confidence            579999999999988766666666665554433322    12378899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||++.........  .....++..|+||
T Consensus       146 ili~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aP  184 (296)
T cd06655         146 VLLGMDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAP  184 (296)
T ss_pred             EEECCCCCEEEccCccchhccccccc--CCCcCCCccccCc
Confidence                      4888887655433221  2234567778877

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.56  E-value=6e-15  Score=86.14  Aligned_cols=98  Identities=19%  Similarity=0.209  Sum_probs=72.9

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +|+|+++++++|...+....+++++..+++...+...   ..+++.++..++.|++.|+.++|+.   +++|+|++++| 
T Consensus        67 ~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~ni  140 (267)
T PHA03390         67 DNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKE---GKLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENV  140 (267)
T ss_pred             cCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHE
Confidence            6999999999999877665666666555554443322   2489999999999999999999999   99999999999 


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.++.....      ....++..|+||
T Consensus       141 l~~~~~~~~~l~dfg~~~~~~~~------~~~~~~~~y~aP  175 (267)
T PHA03390        141 LYDRAKDRIYLCDYGLCKIIGTP------SCYDGTLDYFSP  175 (267)
T ss_pred             EEeCCCCeEEEecCccceecCCC------ccCCCCCcccCh
Confidence                      3677776544221      123466777776

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.56  E-value=8.8e-15  Score=85.79  Aligned_cols=105  Identities=25%  Similarity=0.287  Sum_probs=72.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCC-CCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQG-AQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~   79 (111)
                      ++||||+++++++...+....+++++. +.+...+.. ......+++.++..++.|++.|+.|+|++.  +++|+|++++
T Consensus        57 ~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~  133 (283)
T cd06617          57 VDCPYTVTFYGALFREGDVWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPS  133 (283)
T ss_pred             cCCCCeeeeeEEEecCCcEEEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHH
Confidence            379999999999988776666666664 222222221 112234899999999999999999999843  7999999999


Q ss_pred             C----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           80 N----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |          ++|||.++.......   .....++..|+||
T Consensus       134 nil~~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aP  172 (283)
T cd06617         134 NVLINRNGQVKLCDFGISGYLVDSVA---KTIDAGCKPYMAP  172 (283)
T ss_pred             HEEECCCCCEEEeecccccccccccc---cccccCCccccCh
Confidence            9          489998775533211   1223456667766

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.56  E-value=5.7e-15  Score=98.67  Aligned_cols=75  Identities=23%  Similarity=0.445  Sum_probs=62.5

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||+++++|.+......++++++.+.+...+.      .+++.++..++.+++.|+.|+|...+++++|+|++++|
T Consensus       740 l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~N  813 (968)
T PLN00113        740 LQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEK  813 (968)
T ss_pred             CCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHh
Confidence            589999999999998877777778887776655542      27889999999999999999995444499999999999


Q ss_pred             c
Q 047898           81 I   81 (111)
Q Consensus        81 i   81 (111)
                      |
T Consensus       814 i  814 (968)
T PLN00113        814 I  814 (968)
T ss_pred             E
Confidence            5

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.56  E-value=4.1e-16  Score=91.19  Aligned_cols=103  Identities=26%  Similarity=0.343  Sum_probs=82.1

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCc
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI   81 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~ni   81 (111)
                      +.|+||+++|.+......+++.+|+-.++..+....  +...+.+.++..++...+.|++|||..   +-+|||+|..||
T Consensus        86 ~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~--R~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNI  160 (502)
T KOG0574|consen   86 KSKYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRA--RRKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNI  160 (502)
T ss_pred             CCchhhhhhhhhccCCceEeehhhcCCCcHHHHHHH--hcCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccE
Confidence            458899999999887778888888776655555432  233488999999999999999999998   889999999994


Q ss_pred             ----------CCCcccccCCCCcccccccccCccccccCC
Q 047898           82 ----------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        82 ----------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                .|||++.++...--.  ..+..||+.||||
T Consensus       161 LLNT~G~AKLADFGVAGQLTDTMAK--RNTVIGTPFWMAP  198 (502)
T KOG0574|consen  161 LLNTDGIAKLADFGVAGQLTDTMAK--RNTVIGTPFWMAP  198 (502)
T ss_pred             EEcccchhhhhhccccchhhhhHHh--hCccccCcccccH
Confidence                      899999887654322  3567899999998

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.56  E-value=1e-14  Score=85.76  Aligned_cols=106  Identities=21%  Similarity=0.347  Sum_probs=72.6

Q ss_pred             CCCccceeeeeeeeeCC--ccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 047898            1 LKHENLVELLGYCVEGN--LRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRS   78 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~   78 (111)
                      ++|+|++++.+++...+  ....+++++..+.+...+...  ...+++.++..++.+++.++.|+|+.   +++|+|++|
T Consensus        63 l~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp  137 (284)
T cd05079          63 LYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRN--KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAA  137 (284)
T ss_pred             CCCCCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---Ceeecccch
Confidence            57999999999988652  233444555544444333221  12378899999999999999999999   999999999


Q ss_pred             CC----------cCCCcccccCCCCcccc-cccccCccccccCC
Q 047898           79 SN----------IADFNLSNQAPNMAARL-HSTRVLGTFSYHAP  111 (111)
Q Consensus        79 ~n----------i~~~g~~~~~~~~~~~~-~~~~~~~~~~~~aP  111 (111)
                      +|          +.|||.++......... ......++..|+||
T Consensus       138 ~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~ap  181 (284)
T cd05079         138 RNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAP  181 (284)
T ss_pred             heEEEcCCCCEEECCCccccccccCccceeecCCCCCCccccCH
Confidence            99          37899887654332211 11223455567776

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.56  E-value=7.3e-15  Score=86.52  Aligned_cols=84  Identities=25%  Similarity=0.386  Sum_probs=64.3

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++........+++++.. ++...+...  ...+++.....++.|++.|+.|+|+.   +++|+|++++|
T Consensus        60 l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~--~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~n  133 (291)
T cd07844          60 LKHANIVTLHDIIHTKKTLTLVFEYLDT-DLKQYMDDC--GGGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQN  133 (291)
T ss_pred             CCCcceeeEEEEEecCCeEEEEEecCCC-CHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHH
Confidence            5799999999999887655566666542 333322222  12478889999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccC
Q 047898           81 ----------IADFNLSNQA   90 (111)
Q Consensus        81 ----------i~~~g~~~~~   90 (111)
                                ++|||.++..
T Consensus       134 il~~~~~~~kl~dfg~~~~~  153 (291)
T cd07844         134 LLISERGELKLADFGLARAK  153 (291)
T ss_pred             EEEcCCCCEEECcccccccc
Confidence                      4789887643

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.56  E-value=8.3e-15  Score=87.07  Aligned_cols=107  Identities=23%  Similarity=0.253  Sum_probs=71.4

Q ss_pred             CCCccceeeeeeeeeC--CccchhhhhhhhhhcccCcCCC--CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCC
Q 047898            1 LKHENLVELLGYCVEG--NLRDELIWIIHVITCKKGVQGA--QPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDI   76 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l   76 (111)
                      ++||||+++++++...  .....+++++.. .+...+...  .....++...+..++.|++.|+.|+|+.   +++|+|+
T Consensus        59 l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dl  134 (316)
T cd07842          59 LKHENVVSLVEVFLEHADKSVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDL  134 (316)
T ss_pred             cCCCCccceEEEEeCCCCceEEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCC
Confidence            5799999999999876  333344444432 222222111  1122478889999999999999999999   9999999


Q ss_pred             CCCC--------------cCCCcccccCCCCccc-ccccccCccccccCC
Q 047898           77 RSSN--------------IADFNLSNQAPNMAAR-LHSTRVLGTFSYHAP  111 (111)
Q Consensus        77 ~~~n--------------i~~~g~~~~~~~~~~~-~~~~~~~~~~~~~aP  111 (111)
                      +++|              ++|||++......... .......++..|+||
T Consensus       135 kp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aP  184 (316)
T cd07842         135 KPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAP  184 (316)
T ss_pred             CHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccCH
Confidence            9998              3688887655332221 112234567778887

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.56  E-value=5.9e-15  Score=85.98  Aligned_cols=108  Identities=23%  Similarity=0.349  Sum_probs=72.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCC----CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQ----PSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDI   76 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l   76 (111)
                      ++||||+++++++...+....+++++..+++...+....    ....+++.++..++.+++.|+.|+|+.   +++|+|+
T Consensus        56 l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl  132 (269)
T cd05044          56 FNHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDL  132 (269)
T ss_pred             cCCCCeeeEeeeecCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence            579999999999987766656666665444433332111    123378889999999999999999999   9999999


Q ss_pred             CCCCc---------------CCCcccccCCCCcccccccccCccccccCC
Q 047898           77 RSSNI---------------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        77 ~~~ni---------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +++|+               +|||+++...............++..|+||
T Consensus       133 ~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  182 (269)
T cd05044         133 AARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAP  182 (269)
T ss_pred             ChheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccCH
Confidence            99993               577776544322111111122345567766

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.56  E-value=1.3e-14  Score=83.77  Aligned_cols=85  Identities=27%  Similarity=0.408  Sum_probs=66.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++.+++........+++++..+.+.......  ...+++.+...++.+++.++.++|+.   +++|+|++++|
T Consensus        49 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~n  123 (250)
T cd05085          49 YDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKK--KDELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARN  123 (250)
T ss_pred             CCCCCcCeEEEEEecCCccEEEEECCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChhe
Confidence            57999999999998877665666666555444333221  22378889999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccC
Q 047898           81 ----------IADFNLSNQA   90 (111)
Q Consensus        81 ----------i~~~g~~~~~   90 (111)
                                +.|||++...
T Consensus       124 ili~~~~~~~l~d~g~~~~~  143 (250)
T cd05085         124 CLVGENNVLKISDFGMSRQE  143 (250)
T ss_pred             EEEcCCCeEEECCCccceec
Confidence                      4789987643

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.56  E-value=3.2e-15  Score=89.83  Aligned_cols=77  Identities=22%  Similarity=0.171  Sum_probs=65.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||.+.+|++.|+.......+++|++.+++..+.+.+ +...++...+.+|+..++.|++|||..   +|+.||+||+|
T Consensus       134 lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQ-p~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPEN  209 (459)
T KOG0610|consen  134 LDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQ-PGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPEN  209 (459)
T ss_pred             cCCCccchhhheeeccceeEEEEecCCCccHHHHHhhC-CCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcce
Confidence            58999999999999977766676777777666555554 445699999999999999999999999   99999999999


Q ss_pred             c
Q 047898           81 I   81 (111)
Q Consensus        81 i   81 (111)
                      |
T Consensus       210 I  210 (459)
T KOG0610|consen  210 I  210 (459)
T ss_pred             e
Confidence            3

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.56  E-value=3.3e-15  Score=87.77  Aligned_cols=104  Identities=22%  Similarity=0.297  Sum_probs=73.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHE-KVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~-~~~~~i~h~~l~~~   79 (111)
                      ++|+||+++++++...+....+.+++..+.+............+++..+..++.+++.++.|+|+ .   +++|+|++|+
T Consensus        56 ~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---~i~H~dl~p~  132 (286)
T cd06622          56 AVSPYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH---NIIHRDVKPT  132 (286)
T ss_pred             cCCCcHHhhhhheecCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC---CEeeCCCCHH
Confidence            57999999999998876666666666555443333222112348899999999999999999996 5   8999999999


Q ss_pred             C----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           80 N----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |          ++|||.+.......    .....++..|+||
T Consensus       133 nil~~~~~~~~l~dfg~~~~~~~~~----~~~~~~~~~y~aP  170 (286)
T cd06622         133 NVLVNGNGQVKLCDFGVSGNLVASL----AKTNIGCQSYMAP  170 (286)
T ss_pred             HEEECCCCCEEEeecCCcccccCCc----cccCCCccCccCc
Confidence            9          47899876543221    1223456667776

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.56  E-value=5.2e-15  Score=86.78  Aligned_cols=105  Identities=27%  Similarity=0.313  Sum_probs=72.5

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++...+...++++++.. .+............+++.++..++.|++.|+.|+|+.   +++|+|++++|
T Consensus        55 l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~n  130 (284)
T cd07836          55 LKHENIVRLHDVIHTENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQN  130 (284)
T ss_pred             hcCCCEeeeeeeEeeCCcEEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHH
Confidence            5799999999999987766666666553 2222222222223488999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                +.|||.+.........  .....++..|++|
T Consensus       131 i~~~~~~~~~l~d~g~~~~~~~~~~~--~~~~~~~~~y~~P  169 (284)
T cd07836         131 LLINKRGELKLADFGLARAFGIPVNT--FSNEVVTLWYRAP  169 (284)
T ss_pred             EEECCCCcEEEeecchhhhhcCCccc--cccccccccccCh
Confidence                      3778877544322111  1223445667765

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.55  E-value=1.1e-14  Score=84.99  Aligned_cols=84  Identities=29%  Similarity=0.412  Sum_probs=63.9

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCC-------------CCCCCCCHHHHHHHHHHHHHHHHHhhhcCC
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGA-------------QPSPVLDWMTRVRIVVDALRGLEYLHEKVQ   68 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~   68 (111)
                      +||||+++++++...+....+++++..+++...+...             .....+++.+...++.+++.|+.|+|+.  
T Consensus        54 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~--  131 (270)
T cd05047          54 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK--  131 (270)
T ss_pred             cCCCeeeEEEEEecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence            6999999999998876555555655544443332211             1122378899999999999999999999  


Q ss_pred             CCeeecCCCCCC----------cCCCcccc
Q 047898           69 PSIIQRDIRSSN----------IADFNLSN   88 (111)
Q Consensus        69 ~~i~h~~l~~~n----------i~~~g~~~   88 (111)
                       +++|+|++|+|          ++|||++.
T Consensus       132 -~i~H~dikp~nili~~~~~~kl~dfgl~~  160 (270)
T cd05047         132 -QFIHRDLAARNILVGENYVAKIADFGLSR  160 (270)
T ss_pred             -CEeecccccceEEEcCCCeEEECCCCCcc
Confidence             99999999999          47899875

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.55  E-value=4.6e-15  Score=94.52  Aligned_cols=106  Identities=18%  Similarity=0.301  Sum_probs=80.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      |+|+|+|+|+|+..+ .....++|....+++.+.+.. .....|.......|+.||+.|+.||.++   +++|||+-.+|
T Consensus       168 L~H~hliRLyGvVl~-qp~mMV~ELaplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARN  242 (1039)
T KOG0199|consen  168 LQHPHLIRLYGVVLD-QPAMMVFELAPLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARN  242 (1039)
T ss_pred             ccCcceeEEeeeecc-chhhHHhhhcccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhh
Confidence            689999999999987 335566677777777776665 4445588899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCccc-ccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAAR-LHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~-~~~~~~~~~~~~~aP  111 (111)
                                |+|||+.|.+...... +......-++.|.||
T Consensus       243 lllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaP  284 (1039)
T KOG0199|consen  243 LLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAP  284 (1039)
T ss_pred             heecccceeeeecccceeccCCCCcceEecCCCcCcccccCH
Confidence                      5999999877665432 212222334556665

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.55  E-value=1.2e-14  Score=84.30  Aligned_cols=104  Identities=21%  Similarity=0.287  Sum_probs=70.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++.... ...++++...+.+...+..   ...+++.....++.|++.|+.++|++   +++|+|++|.|
T Consensus        53 l~h~~i~~~~~~~~~~~-~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~n  125 (257)
T cd05116          53 LDNPYIVRMIGICEAES-WMLVMELAELGPLNKFLQK---NKHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARN  125 (257)
T ss_pred             CCCCCcceEEEEEcCCC-cEEEEecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhh
Confidence            57999999999886432 3344444444444333322   23378899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccc-cccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARL-HSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~-~~~~~~~~~~~~aP  111 (111)
                                ++|||.++......... ......++..|+||
T Consensus       126 ill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aP  167 (257)
T cd05116         126 VLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAP  167 (257)
T ss_pred             EEEcCCCeEEECCCccccccCCCCCeeeecCCCCCCccccCH
Confidence                      47999887654332211 01112234567776

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.55  E-value=2e-15  Score=87.36  Aligned_cols=103  Identities=27%  Similarity=0.360  Sum_probs=75.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++.+++........+++++..+.+...+.   ....++..++..++.|++.|+.++|+.   +++|+|++|+|
T Consensus        55 l~~~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~---~~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~N  128 (260)
T PF00069_consen   55 LRHPNIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQ---KNKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPEN  128 (260)
T ss_dssp             HTBTTBCHEEEEEEESSEEEEEEEEETTEBHHHHHH---HHSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGG
T ss_pred             cccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccc---ccccccccccc
Confidence            379999999999998665555555555544433333   233378999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+.........  .....++..|+||
T Consensus       129 Il~~~~~~~~l~Dfg~~~~~~~~~~~--~~~~~~~~~y~aP  167 (260)
T PF00069_consen  129 ILLDENGEVKLIDFGSSVKLSENNEN--FNPFVGTPEYMAP  167 (260)
T ss_dssp             EEESTTSEEEESSGTTTEESTSTTSE--BSSSSSSGGGSCH
T ss_pred             cccccccccccccccccccccccccc--ccccccccccccc
Confidence                      4899988654222111  3345677888886

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.55  E-value=1.9e-14  Score=85.44  Aligned_cols=99  Identities=26%  Similarity=0.343  Sum_probs=70.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++.++|...+...++++++.. .+.......  ...+++.++..++.|++.|+.|+|+.   +++|+|++++|
T Consensus        72 l~h~niv~~~~~~~~~~~~~lv~e~~~g-~l~~~~~~~--~~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~n  145 (307)
T cd06607          72 LRHPNTIEYKGCYLREHTAWLVMEYCLG-SASDILEVH--KKPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGN  145 (307)
T ss_pred             CCCCCEEEEEEEEEeCCeEEEEHHhhCC-CHHHHHHHc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCccc
Confidence            5799999999999987766666666542 222222111  12378889999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+......      ....++..|+||
T Consensus       146 Il~~~~~~~kL~dfg~~~~~~~~------~~~~~~~~y~aP  180 (307)
T cd06607         146 ILLTEPGTVKLADFGSASLVSPA------NSFVGTPYWMAP  180 (307)
T ss_pred             EEECCCCCEEEeecCcceecCCC------CCccCCccccCc
Confidence                      3788877543222      123456667766

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.55  E-value=5.4e-15  Score=86.24  Aligned_cols=104  Identities=25%  Similarity=0.337  Sum_probs=71.8

Q ss_pred             CCccceeeeeeeeeCCc------cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecC
Q 047898            2 KHENLVELLGYCVEGNL------RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRD   75 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~   75 (111)
                      +|+||+++.+++.....      ...+++++..+.+...+... ....+++.....++.|++.|+.|+|++   +++|+|
T Consensus        61 ~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~-~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~d  136 (272)
T cd06637          61 HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNT-KGNTLKEEWIAYICREILRGLSHLHQH---KVIHRD  136 (272)
T ss_pred             CCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCC
Confidence            69999999999876432      12344444444443333321 223378888999999999999999999   999999


Q ss_pred             CCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           76 IRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        76 l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      ++++|          +.|||++.........  .....++..|+||
T Consensus       137 l~~~nili~~~~~~~l~Dfg~~~~~~~~~~~--~~~~~g~~~y~aP  180 (272)
T cd06637         137 IKGQNVLLTENAEVKLVDFGVSAQLDRTVGR--RNTFIGTPYWMAP  180 (272)
T ss_pred             CCHHHEEECCCCCEEEccCCCceeccccccc--CCcccccccccCH
Confidence            99999          4899988754332211  2334567778776

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.55  E-value=4.6e-15  Score=87.05  Aligned_cols=104  Identities=26%  Similarity=0.347  Sum_probs=72.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++.+++.+.+....+++++. ..+...+.. .....+++.++..++.+++.|+.|+|+.   +++|+|++++|
T Consensus        56 l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~-~~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~n  130 (284)
T cd07860          56 LNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDA-SPLSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQN  130 (284)
T ss_pred             cCCCCCcchhhhcccCCcEEEEeeccc-cCHHHHHHh-CCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHH
Confidence            589999999999987765555555553 222222221 1223478899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+.........  .....++..|+||
T Consensus       131 ill~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~y~aP  169 (284)
T cd07860         131 LLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAP  169 (284)
T ss_pred             EEECCCCCEEEeeccchhhcccCccc--cccccccccccCC
Confidence                      3788887654322111  1223456667776

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.55  E-value=8.4e-15  Score=85.08  Aligned_cols=102  Identities=22%  Similarity=0.237  Sum_probs=75.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++.+++.++.....+++++..+.+...+..   ...++..++..++.|++.|+.++|++   +++|+|+++.|
T Consensus        50 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~n  123 (262)
T cd05572          50 CNHPFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRD---RGLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPEN  123 (262)
T ss_pred             CCCCCEeeeeeeEEcCCccEEEEecCCCCcHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHH
Confidence            5799999999999887666566666655555444433   22378888999999999999999999   99999999999


Q ss_pred             c----------CCCcccccCCCCcccccccccCccccccCC
Q 047898           81 I----------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 i----------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |          .|||.+........   .....++..|++|
T Consensus       124 ilv~~~~~~~l~df~~~~~~~~~~~---~~~~~~~~~~~~P  161 (262)
T cd05572         124 LLLDSNGYVKLVDFGFAKKLKSGQK---TWTFCGTPEYVAP  161 (262)
T ss_pred             EEEcCCCCEEEeeCCcccccCcccc---cccccCCcCccCh
Confidence            4          78888776543321   1223566677776

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.55  E-value=7.7e-15  Score=85.30  Aligned_cols=106  Identities=22%  Similarity=0.328  Sum_probs=75.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCC-CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGA-QPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~   79 (111)
                      ++|+|++++++++...+....+++++..+++...+... .....++..++..++.+++.|+.++|+.   +++|+|++++
T Consensus        59 ~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~  135 (267)
T cd08224          59 LDHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPA  135 (267)
T ss_pred             CCCCCeeeeeeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChh
Confidence            57999999999998877666666666655544333221 1223378899999999999999999999   9999999999


Q ss_pred             C----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           80 N----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |          +.|||.+.........  .....++..|+||
T Consensus       136 nil~~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~y~ap  175 (267)
T cd08224         136 NVFITATGVVKLGDLGLGRFFSSKTTA--AHSLVGTPYYMSP  175 (267)
T ss_pred             hEEECCCCcEEEeccceeeeccCCCcc--cceecCCccccCH
Confidence            9          3788887654433221  1223466677776

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.55  E-value=1.1e-14  Score=86.07  Aligned_cols=85  Identities=28%  Similarity=0.386  Sum_probs=63.8

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCC-------------CCCCCCCHHHHHHHHHHHHHHHHHhhhcCC
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGA-------------QPSPVLDWMTRVRIVVDALRGLEYLHEKVQ   68 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~   68 (111)
                      +||||+++++++........+.+++..+++...+...             .....+++.++..++.|++.|+.++|+.  
T Consensus        61 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~--  138 (297)
T cd05089          61 HHPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK--  138 (297)
T ss_pred             CCCchhheEEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence            6999999999998766555555555544443333211             1122478889999999999999999999  


Q ss_pred             CCeeecCCCCCC----------cCCCccccc
Q 047898           69 PSIIQRDIRSSN----------IADFNLSNQ   89 (111)
Q Consensus        69 ~~i~h~~l~~~n----------i~~~g~~~~   89 (111)
                       +++|+|++|+|          +.|||++..
T Consensus       139 -~ivH~dlkp~Nill~~~~~~kl~dfg~~~~  168 (297)
T cd05089         139 -QFIHRDLAARNVLVGENLASKIADFGLSRG  168 (297)
T ss_pred             -CcccCcCCcceEEECCCCeEEECCcCCCcc
Confidence             99999999999          378988753

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.55  E-value=2.1e-15  Score=89.22  Aligned_cols=102  Identities=25%  Similarity=0.353  Sum_probs=74.8

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||++++++++..++....+++++..+.+....    ....+++.++..++.|++.|+.++|+.   +++|+|++++|
T Consensus        75 l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~----~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~N  147 (297)
T cd06659          75 YQHQNVVEMYKSYLVGEELWVLMEFLQGGALTDIV----SQTRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDS  147 (297)
T ss_pred             CCCCchhhhhhheeeCCeEEEEEecCCCCCHHHHH----hhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHH
Confidence            57999999999998877666666666544433322    123378899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+.........  .....++..|+||
T Consensus       148 ill~~~~~~kL~dfg~~~~~~~~~~~--~~~~~~~~~y~aP  186 (297)
T cd06659         148 ILLTLDGRVKLSDFGFCAQISKDVPK--RKSLVGTPYWMAP  186 (297)
T ss_pred             eEEccCCcEEEeechhHhhccccccc--ccceecCccccCH
Confidence                      4889987654332211  2234567778876

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.55  E-value=1e-14  Score=84.47  Aligned_cols=105  Identities=23%  Similarity=0.289  Sum_probs=72.6

Q ss_pred             CCCccceeeeeeeeeCCc-cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEGNL-RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~   79 (111)
                      ++|+|++++.+.+..... ...+++++..+.+...+... ....+++.++..++.+++.|+.++|+.   +++|+|++++
T Consensus        56 l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~-~~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~  131 (257)
T cd08223          56 LKHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQ-KGKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQ  131 (257)
T ss_pred             CCCCCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCch
Confidence            479999999988764332 23444554444443333221 223378999999999999999999999   9999999999


Q ss_pred             C----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           80 N----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |          +.|||.+.........  .....++..|+||
T Consensus       132 nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aP  171 (257)
T cd08223         132 NVFLTRTNIIKVGDLGIARVLENQCDM--ASTLIGTPYYMSP  171 (257)
T ss_pred             hEEEecCCcEEEecccceEEecccCCc--cccccCCcCccCh
Confidence            9          3788887655432221  2334567788887

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.55  E-value=3.2e-15  Score=87.01  Aligned_cols=105  Identities=26%  Similarity=0.410  Sum_probs=75.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++..++....+++++..+.+...+..   ...+++.....++.|++.|+.++|++   +++|+|++++|
T Consensus        60 l~h~~iv~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~n  133 (268)
T cd06630          60 LNHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSK---YGAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGAN  133 (268)
T ss_pred             cCCCceehhhceeccCCeEEEEEeccCCCcHHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHH
Confidence            5799999999999987766667676665555444332   22378888999999999999999999   99999999999


Q ss_pred             -----------cCCCcccccCCCCccccc--ccccCccccccCC
Q 047898           81 -----------IADFNLSNQAPNMAARLH--STRVLGTFSYHAP  111 (111)
Q Consensus        81 -----------i~~~g~~~~~~~~~~~~~--~~~~~~~~~~~aP  111 (111)
                                 ++|||.+...........  .....++..|+||
T Consensus       134 il~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~P  177 (268)
T cd06630         134 LLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAP  177 (268)
T ss_pred             EEEcCCCCEEEEcccccccccccccccCCccccccccccceeCH
Confidence                       367887765543211100  1223466777776

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.54  E-value=1.2e-14  Score=83.99  Aligned_cols=104  Identities=26%  Similarity=0.329  Sum_probs=75.3

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++.+++........+++++..+.+...+...  ...+++.++..++.+++.|+.++|+.   +++|+|+++.|
T Consensus        55 l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~n  129 (256)
T cd06612          55 CDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKIT--NKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGN  129 (256)
T ss_pred             CCCCcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcce
Confidence            47999999999999876655666666555444433221  23378999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                +.|||.+.........  .....++..|+||
T Consensus       130 i~~~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~y~~P  168 (256)
T cd06612         130 ILLNEEGQAKLADFGVSGQLTDTMAK--RNTVIGTPFWMAP  168 (256)
T ss_pred             EEECCCCcEEEcccccchhcccCccc--cccccCCccccCH
Confidence                      4788887655433211  1223456677776

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.54  E-value=7.3e-15  Score=86.92  Aligned_cols=102  Identities=24%  Similarity=0.349  Sum_probs=74.8

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++..++....+++++..+.+.....    ...++..++..++.+++.++.++|+.   +++|+|++++|
T Consensus        73 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~----~~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~N  145 (297)
T cd06656          73 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT----ETCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDN  145 (297)
T ss_pred             CCCCCEeeEEEEEecCCEEEEeecccCCCCHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHH
Confidence            479999999999988776666667666555443332    12378888999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+.........  .....++..|+||
T Consensus       146 ili~~~~~~~l~Dfg~~~~~~~~~~~--~~~~~~~~~y~aP  184 (297)
T cd06656         146 ILLGMDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAP  184 (297)
T ss_pred             EEECCCCCEEECcCccceEccCCccC--cCcccCCccccCH
Confidence                      4889987654332211  1233566677776

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.54  E-value=8.9e-15  Score=85.50  Aligned_cols=102  Identities=27%  Similarity=0.367  Sum_probs=76.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+|++++.+++........+++++..+.+......    ..+++.++..++.|++.++.++|+.   +++|+|++++|
T Consensus        56 l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~n  128 (274)
T cd06609          56 CRSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKP----GKLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAAN  128 (274)
T ss_pred             cCCCCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHH
Confidence            5799999999999887666666666655544433322    1488999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.++........  .....++..|+||
T Consensus       129 i~i~~~~~~~l~d~g~~~~~~~~~~~--~~~~~~~~~y~~P  167 (274)
T cd06609         129 ILLSEEGDVKLADFGVSGQLTSTMSK--RNTFVGTPFWMAP  167 (274)
T ss_pred             EEECCCCCEEEcccccceeecccccc--cccccCCccccCh
Confidence                      4789888766543221  2334566778776

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.54  E-value=6.4e-15  Score=87.61  Aligned_cols=86  Identities=21%  Similarity=0.322  Sum_probs=65.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++...+....+++++..+.+...+..... ..++......++.|++.|+.|||+.   +++|+|++++|
T Consensus        56 l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~N  131 (314)
T cd08216          56 LQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKTHFP-EGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASH  131 (314)
T ss_pred             cCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcce
Confidence            5799999999999887766666666665555444432222 2378888899999999999999999   99999999999


Q ss_pred             c----------CCCcccccC
Q 047898           81 I----------ADFNLSNQA   90 (111)
Q Consensus        81 i----------~~~g~~~~~   90 (111)
                      +          +||+.+...
T Consensus       132 ili~~~~~~kl~d~~~~~~~  151 (314)
T cd08216         132 ILLSGDGKVVLSGLRYSVSM  151 (314)
T ss_pred             EEEecCCceEEecCccceee
Confidence            3          667766543

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.54  E-value=1.4e-15  Score=98.10  Aligned_cols=104  Identities=20%  Similarity=0.323  Sum_probs=83.5

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      |+|||+++++|+|.... ..++.++|..+.+.+..+.++..  +.....+.+..||+.||.|+|.+   +++|||+-.+|
T Consensus       755 ldHpnl~RLLgvc~~s~-~qlvtq~mP~G~LlDyvr~hr~~--igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRN  828 (1177)
T KOG1025|consen  755 LDHPNLLRLLGVCMLST-LQLVTQLMPLGCLLDYVREHRDN--IGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARN  828 (1177)
T ss_pred             CCCchHHHHhhhcccch-HHHHHHhcccchHHHHHHHhhcc--ccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhh
Confidence            68999999999999866 56677888888888777765544  77788899999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHA  110 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~a  110 (111)
                                |.|||+++.+..+............+.|||
T Consensus       829 VLVksP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwma  868 (1177)
T KOG1025|consen  829 VLVKSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMA  868 (1177)
T ss_pred             eeecCCCeEEEEecchhhccCcccccccccccccCcHHHH
Confidence                      589999998877655432333334566765

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.54  E-value=2.8e-15  Score=87.99  Aligned_cols=103  Identities=26%  Similarity=0.335  Sum_probs=74.5

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+....+++++....+......   ...+++.+...++.|++.|+.|+|+.   +++|+|++++|
T Consensus        57 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~n  130 (286)
T cd07846          57 LRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKY---PNGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPEN  130 (286)
T ss_pred             cCCcchhhHHHhcccCCeEEEEEecCCccHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHH
Confidence            5799999999999887766666666664433322211   22378999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+.........  .....++..|+||
T Consensus       131 i~~~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~y~aP  169 (286)
T cd07846         131 ILVSQSGVVKLCDFGFARTLAAPGEV--YTDYVATRWYRAP  169 (286)
T ss_pred             EEECCCCcEEEEeeeeeeeccCCccc--cCcccceeeccCc
Confidence                      3788887655433221  2234466777776

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.54  E-value=7.9e-15  Score=86.15  Aligned_cols=105  Identities=25%  Similarity=0.333  Sum_probs=71.2

Q ss_pred             CCccceeeeeeeeeC-----CccchhhhhhhhhhcccCcCC-CCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecC
Q 047898            2 KHENLVELLGYCVEG-----NLRDELIWIIHVITCKKGVQG-AQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRD   75 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~   75 (111)
                      +|+||+++++++...     +....+++++..+.+...+.. ......+++..+..++.|++.|+.|+|+.   +++|+|
T Consensus        73 ~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~d  149 (286)
T cd06638          73 DHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRD  149 (286)
T ss_pred             cCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccC
Confidence            699999999988532     223344455554444332221 11223378888999999999999999999   999999


Q ss_pred             CCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           76 IRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        76 l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      ++++|          +.|||.+.........  .....++..|+||
T Consensus       150 lkp~nili~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aP  193 (286)
T cd06638         150 VKGNNILLTTEGGVKLVDFGVSAQLTSTRLR--RNTSVGTPFWMAP  193 (286)
T ss_pred             CCHHhEEECCCCCEEEccCCceeecccCCCc--cccccCCCcccCh
Confidence            99999          3789887655332211  2234577778887

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.54  E-value=6.5e-15  Score=97.51  Aligned_cols=108  Identities=23%  Similarity=0.312  Sum_probs=72.8

Q ss_pred             CCCccceeeeeeeeeCCc--cchhhhhhhhhhcccCcCCC-CCCCCCCHHHHHHHHHHHHHHHHHhhhcCC----CCeee
Q 047898            1 LKHENLVELLGYCVEGNL--RDELIWIIHVITCKKGVQGA-QPSPVLDWMTRVRIVVDALRGLEYLHEKVQ----PSIIQ   73 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~----~~i~h   73 (111)
                      |+|||||+++++|.....  ..++++++..+.+...+... .....+++..++.++.|++.||.|||+...    .+|+|
T Consensus        69 L~HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVH  148 (1021)
T PTZ00266         69 LKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLH  148 (1021)
T ss_pred             cCCCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCcee
Confidence            589999999999875432  33445555555444333221 112348999999999999999999998521    15999


Q ss_pred             cCCCCCCc---------------------------CCCcccccCCCCcccccccccCccccccCC
Q 047898           74 RDIRSSNI---------------------------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        74 ~~l~~~ni---------------------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +||+|+||                           +|||++........   .....+|+.|+||
T Consensus       149 RDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~---~~s~vGTp~YmAP  210 (1021)
T PTZ00266        149 RDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESM---AHSCVGTPYYWSP  210 (1021)
T ss_pred             ccCcHHHeEeecCccccccccccccccCCCCceEEccCCcccccccccc---ccccCCCccccCH
Confidence            99999993                           36777654432211   2344688999988

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.54  E-value=4.9e-15  Score=87.58  Aligned_cols=105  Identities=20%  Similarity=0.250  Sum_probs=66.1

Q ss_pred             CCCccceeeeeeeeeCCccch-hhhhhhhh--hcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDE-LIWIIHVI--TCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIR   77 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~   77 (111)
                      ++|++++++++++........ .+..++..  .......   .....+...+..++.|++.|+.|+|+.   +++|||+|
T Consensus        80 ~~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiK  153 (294)
T PHA02882         80 IDHLGIPKYYGCGSFKRCRMYYRFILLEKLVENTKEIFK---RIKCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIK  153 (294)
T ss_pred             CCCCCCCcEEEeeeEecCCceEEEEEEehhccCHHHHHH---hhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCC
Confidence            468999999987665332211 01111111  1111111   112256777888999999999999999   99999999


Q ss_pred             CCC----------cCCCcccccCCCCcccc-----cccccCccccccCC
Q 047898           78 SSN----------IADFNLSNQAPNMAARL-----HSTRVLGTFSYHAP  111 (111)
Q Consensus        78 ~~n----------i~~~g~~~~~~~~~~~~-----~~~~~~~~~~~~aP  111 (111)
                      |+|          ++|||+++.........     ......||+.|+||
T Consensus       154 p~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ap  202 (294)
T PHA02882        154 PENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGL  202 (294)
T ss_pred             HHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCH
Confidence            999          37999987654322110     11234688899886

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.54  E-value=7.1e-15  Score=85.09  Aligned_cols=105  Identities=20%  Similarity=0.243  Sum_probs=74.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++.+++...+....+++++..+.+....... ....+++.++..++.|++.|+.++|++   +++|+|++++|
T Consensus        56 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~n  131 (256)
T cd08218          56 MKHPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQ-RGVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQN  131 (256)
T ss_pred             CCCCCeeeeEeeecCCCeEEEEEecCCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHH
Confidence            57999999999998877666666666554443333221 122378889999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+.........  .....++..|+||
T Consensus       132 il~~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~~~~p  170 (256)
T cd08218         132 IFLTKDGTIKLGDFGIARVLNSTVEL--ARTCIGTPYYLSP  170 (256)
T ss_pred             EEEcCCCCEEEeeccceeecCcchhh--hhhccCCccccCH
Confidence                      3788877654332211  1223456667665

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.54  E-value=1e-14  Score=84.73  Aligned_cols=108  Identities=28%  Similarity=0.354  Sum_probs=77.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+|++++.+.+...+....+.+++..+.+............+++.++..++.|++.|+.++|+.   +++|+|++++|
T Consensus        56 l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~n  132 (267)
T cd06610          56 CNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGN  132 (267)
T ss_pred             cCCCCEEEEEEEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHh
Confidence            579999999999988776666666665555444443322223478889999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccc--cccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARL--HSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~--~~~~~~~~~~~~aP  111 (111)
                                +.|||.+..........  ......++..|++|
T Consensus       133 i~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~P  175 (267)
T cd06610         133 ILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAP  175 (267)
T ss_pred             EEEcCCCCEEEcccchHHHhccCccccccccccccCChhhcCh
Confidence                      37888876554432210  12234567778876

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.54  E-value=1.2e-14  Score=85.31  Aligned_cols=104  Identities=23%  Similarity=0.304  Sum_probs=75.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+|++++++++..+.....+++++ .+++...+....  ..+++.++..++.|++.++.|+|+.   +++|+|++++|
T Consensus        56 ~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~n  129 (286)
T cd07832          56 CQHPYVVKLLDVFPHGSGFVLVMEYM-PSDLSEVLRDEE--RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPAN  129 (286)
T ss_pred             CCCCCCcceeeEEecCCeeEEEeccc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHH
Confidence            47999999999998866565666665 444433332221  3388899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                +.|||.+......... ......++.+|+||
T Consensus       130 i~~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aP  169 (286)
T cd07832         130 LLISADGVLKIADFGLARLFSEEEPR-LYSHQVATRWYRAP  169 (286)
T ss_pred             EEEcCCCcEEEeeeeecccccCCCCC-ccccccCcccccCc
Confidence                      3788887765433211 12234567778877

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.54  E-value=1.2e-14  Score=85.60  Aligned_cols=102  Identities=23%  Similarity=0.365  Sum_probs=74.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++..++....+++++..+.+...+..    ..++..+...++.|++.|+.++|+.   +++|+|++++|
T Consensus        73 ~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~N  145 (285)
T cd06648          73 YQHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTH----TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDS  145 (285)
T ss_pred             cCCCChheEEEEEEcCCeEEEEEeccCCCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhh
Confidence            4799999999999887766666666655544433322    2378888999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+.........  .....++..|+||
T Consensus       146 il~~~~~~~~l~d~g~~~~~~~~~~~--~~~~~~~~~y~aP  184 (285)
T cd06648         146 ILLTSDGRVKLSDFGFCAQVSKEVPR--RKSLVGTPYWMAP  184 (285)
T ss_pred             EEEcCCCcEEEcccccchhhccCCcc--cccccCCccccCH
Confidence                      3788876544332211  1224567778776

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.53  E-value=1.9e-14  Score=84.46  Aligned_cols=87  Identities=25%  Similarity=0.408  Sum_probs=65.0

Q ss_pred             CCCccceeeeeeeeeCCc--cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 047898            1 LKHENLVELLGYCVEGNL--RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRS   78 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~   78 (111)
                      ++||||+++.+++...+.  ...+.+++..+++...+...  ...+++.++..++.|++.|+.|+|+.   +++|+|+++
T Consensus        62 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp  136 (284)
T cd05081          62 LQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKH--RERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLAT  136 (284)
T ss_pred             CCCCCeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhc--CcCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCH
Confidence            589999999998865432  23444555555554444322  12378899999999999999999999   999999999


Q ss_pred             CC----------cCCCcccccCCC
Q 047898           79 SN----------IADFNLSNQAPN   92 (111)
Q Consensus        79 ~n----------i~~~g~~~~~~~   92 (111)
                      +|          ++|||.++....
T Consensus       137 ~nili~~~~~~~l~dfg~~~~~~~  160 (284)
T cd05081         137 RNILVESENRVKIGDFGLTKVLPQ  160 (284)
T ss_pred             hhEEECCCCeEEECCCcccccccC
Confidence            99          379998876543

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.53  E-value=2.2e-14  Score=83.26  Aligned_cols=86  Identities=21%  Similarity=0.359  Sum_probs=61.5

Q ss_pred             CCCccceeeeeeeeeCCc-cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEGNL-RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~   79 (111)
                      ++||||+++++++...+. ...+.+++..+++...+...  ....++.....++.+++.|+.|+|+.   +++|+|++++
T Consensus        53 l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~  127 (262)
T cd05058          53 FSHPNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSE--THNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAAR  127 (262)
T ss_pred             CCCCCcceEEEEeecCCCCcEEEEecCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcc
Confidence            589999999998764332 33344444444444433221  12256677788899999999999999   9999999999


Q ss_pred             C----------cCCCcccccCC
Q 047898           80 N----------IADFNLSNQAP   91 (111)
Q Consensus        80 n----------i~~~g~~~~~~   91 (111)
                      |          ++|||.++...
T Consensus       128 nili~~~~~~kl~dfg~~~~~~  149 (262)
T cd05058         128 NCMLDESFTVKVADFGLARDIY  149 (262)
T ss_pred             eEEEcCCCcEEECCcccccccc
Confidence            9          47999886543

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.53  E-value=4.4e-15  Score=90.03  Aligned_cols=99  Identities=26%  Similarity=0.328  Sum_probs=68.3

Q ss_pred             CCCccceeeeeeeeeCCcc------chhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeec
Q 047898            1 LKHENLVELLGYCVEGNLR------DELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQR   74 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~   74 (111)
                      ++||||+++++++......      ..+.+++... +....     ...++..++..++.|++.|+.|+|++   +++|+
T Consensus        80 l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~  150 (364)
T cd07875          80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LCQVI-----QMELDHERMSYLLYQMLCGIKHLHSA---GIIHR  150 (364)
T ss_pred             cCCCCccccceeecccccccccCeEEEEEeCCCCC-HHHHH-----HhcCCHHHHHHHHHHHHHHHHHHhhC---CeecC
Confidence            5799999999988653311      2222333211 11111     12277888889999999999999999   99999


Q ss_pred             CCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           75 DIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        75 ~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |++|+|          ++|||.++.......   .....++..|+||
T Consensus       151 Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~---~~~~~~t~~y~aP  194 (364)
T cd07875         151 DLKPSNIVVKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYYRAP  194 (364)
T ss_pred             CCCHHHEEECCCCcEEEEeCCCccccCCCCc---ccCCcccCCcCCH
Confidence            999999          489999875533221   2345678889987

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.53  E-value=1.9e-15  Score=87.44  Aligned_cols=104  Identities=28%  Similarity=0.313  Sum_probs=70.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhh----hhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWI----IHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDI   76 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l   76 (111)
                      ++|.|+...+++.+.+...++...|    ++..++.+.   ..+...++.+.+.-+..||+.|+.|+|+.   +|+||||
T Consensus       109 FkHdNVLSaLDILQPph~dfFqEiYV~TELmQSDLHKI---IVSPQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDI  182 (449)
T KOG0664|consen  109 FRHDNVLSLLDILQPANPSFFQELYVLTELMQSDLHKI---IVSPQALTPDHVKVFVYQILRGLKYLHTA---NILHRDI  182 (449)
T ss_pred             hccccHHHHHHhcCCCCchHHHHHHHHHHHHHhhhhhe---eccCCCCCcchhhhhHHHHHhhhHHHhhc---chhhccC
Confidence            4788998888887765533321111    112222222   23344478888888899999999999999   9999999


Q ss_pred             CCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           77 RSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        77 ~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      ||.|          |+|||+++....+... +....+.|.+|.||
T Consensus       183 KPGNLLVNSNCvLKICDFGLARvee~d~~~-hMTqEVVTQYYRAP  226 (449)
T KOG0664|consen  183 KPGNLLVNSNCILKICDFGLARTWDQRDRL-NMTHEVVTQYYRAP  226 (449)
T ss_pred             CCccEEeccCceEEecccccccccchhhhh-hhHHHHHHHHhccH
Confidence            9999          6999999876544322 22334556777776

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.53  E-value=1.1e-14  Score=84.56  Aligned_cols=98  Identities=22%  Similarity=0.299  Sum_probs=72.4

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCc
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI   81 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~ni   81 (111)
                      +|+|++++++++..++....+.+++..+.+...+...   ..++...+..++.|++.|+.|+|+.   +++|+|+++.||
T Consensus        55 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~ni  128 (260)
T cd05611          55 ESPYVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTL---GGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENL  128 (260)
T ss_pred             CCCCeeeeeeeEEcCCeEEEEEeccCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHe
Confidence            6999999999998877666666766655554443322   2378889999999999999999999   999999999993


Q ss_pred             ----------CCCcccccCCCCcccccccccCccccccCC
Q 047898           82 ----------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        82 ----------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                +|||+++.....      ....++..|++|
T Consensus       129 l~~~~~~~~l~dfg~~~~~~~~------~~~~~~~~y~~p  162 (260)
T cd05611         129 LIDQTGHLKLTDFGLSRNGLEN------KKFVGTPDYLAP  162 (260)
T ss_pred             EECCCCcEEEeecccceecccc------ccCCCCcCccCh
Confidence                      788876643221      122455666665

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.53  E-value=9.7e-15  Score=85.51  Aligned_cols=102  Identities=23%  Similarity=0.336  Sum_probs=74.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++..+.....+++++..+.+...+.    ...+++.++..++.+++.|+.|+|+.   +++|+|++++|
T Consensus        59 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~n  131 (277)
T cd06642          59 CDSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLK----PGPLEETYIATILREILKGLDYLHSE---RKIHRDIKAAN  131 (277)
T ss_pred             CCCCccHhhhcccccCCceEEEEEccCCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChhe
Confidence            579999999999988776666666666554433332    22378888999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                +.|||.+.........  .....++..|+||
T Consensus       132 i~i~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~y~aP  170 (277)
T cd06642         132 VLLSEQGDVKLADFGVAGQLTDTQIK--RNTFVGTPFWMAP  170 (277)
T ss_pred             EEEeCCCCEEEccccccccccCcchh--hhcccCcccccCH
Confidence                      3788887655432211  2233466677776

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.53  E-value=1.9e-15  Score=86.39  Aligned_cols=108  Identities=22%  Similarity=0.370  Sum_probs=71.9

Q ss_pred             CCCccceeeeeeeeeCCcc-----chhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecC
Q 047898            1 LKHENLVELLGYCVEGNLR-----DELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRD   75 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~   75 (111)
                      |+|+|++.+.++|......     ..++.++..+..............++..++..++.++++|+.|+|+.   .++|||
T Consensus        73 lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRD  149 (376)
T KOG0669|consen   73 LKHENVVNLIEICRTKATPTNRDRATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRD  149 (376)
T ss_pred             hcchhHHHHHHHHhhccCCcccccceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHh---hHHhhc
Confidence            5899999999998753221     12444444333222111122323388889999999999999999999   999999


Q ss_pred             CCCCC----------cCCCcccccCCCCcccc--cccccCccccccCC
Q 047898           76 IRSSN----------IADFNLSNQAPNMAARL--HSTRVLGTFSYHAP  111 (111)
Q Consensus        76 l~~~n----------i~~~g~~~~~~~~~~~~--~~~~~~~~~~~~aP  111 (111)
                      +|++|          ++|||.++.+.......  .....+.|.||+.|
T Consensus       150 mKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrpp  197 (376)
T KOG0669|consen  150 MKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPP  197 (376)
T ss_pred             ccHhhEEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCH
Confidence            99999          48999997654332211  02234557888765

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.53  E-value=3.5e-14  Score=83.78  Aligned_cols=104  Identities=23%  Similarity=0.315  Sum_probs=70.1

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++........+.+++.. .+...... .....++...+..++.|++.|+.|+|++   +++|+|++++|
T Consensus        58 l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~n  132 (294)
T PLN00009         58 MQHGNIVRLQDVVHSEKRLYLVFEYLDL-DLKKHMDS-SPDFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQN  132 (294)
T ss_pred             ccCCCEeeEEEEEecCCeEEEEEecccc-cHHHHHHh-CCCCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcce
Confidence            5799999999999987766666666532 22222211 1222257778888999999999999999   99999999999


Q ss_pred             -----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 -----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 -----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                 ++|||.+.........  .....++..|+||
T Consensus       133 ill~~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~~P  172 (294)
T PLN00009        133 LLIDRRTNALKLADFGLARAFGIPVRT--FTHEVVTLWYRAP  172 (294)
T ss_pred             EEEECCCCEEEEcccccccccCCCccc--cccCceeecccCH
Confidence                       3788877644322111  1223455667765

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.53  E-value=1.1e-14  Score=85.96  Aligned_cols=102  Identities=25%  Similarity=0.367  Sum_probs=74.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+....+++++..+.+.....    ...++..++..++.+++.|+.++|+.   +++|+|++++|
T Consensus        73 l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~----~~~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~N  145 (293)
T cd06647          73 NKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT----ETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDN  145 (293)
T ss_pred             cCCCCeeehhheeeeCCcEEEEEecCCCCcHHHHHh----hcCCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHH
Confidence            579999999999988776666666666555443332    12367888899999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||++.........  .....++..|++|
T Consensus       146 ili~~~~~~kL~dfg~~~~~~~~~~~--~~~~~~~~~y~~P  184 (293)
T cd06647         146 ILLGMDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAP  184 (293)
T ss_pred             EEEcCCCCEEEccCcceecccccccc--cccccCChhhcCc
Confidence                      4788877654433221  2223566778776

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.52  E-value=1.3e-14  Score=83.86  Aligned_cols=104  Identities=27%  Similarity=0.333  Sum_probs=74.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||++++++.+...+....+++++..+.+.+.+.... ...+++..+..++.+++.++.++|++   +++|+|++++|
T Consensus        56 ~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~n  131 (256)
T cd08220          56 LSHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRC-NSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQN  131 (256)
T ss_pred             CCCCchhheeeeEecCCEEEEEEecCCCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHH
Confidence            479999999999987766666666665554444433221 23378889999999999999999999   99999999999


Q ss_pred             c-----------CCCcccccCCCCcccccccccCccccccCC
Q 047898           81 I-----------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 i-----------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |           .|||.+........   .....++..|+||
T Consensus       132 il~~~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~y~aP  170 (256)
T cd08220         132 ILLDKHKMVVKIGDFGISKILSSKSK---AYTVVGTPCYISP  170 (256)
T ss_pred             EEEcCCCCEEEEccCCCceecCCCcc---ccccccCCcccCc
Confidence            3           67777765433221   2234567778877

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.52  E-value=1.9e-14  Score=84.23  Aligned_cols=101  Identities=19%  Similarity=0.297  Sum_probs=74.2

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +|||++++.+++........+++++..+.+......    ..+++..+..++.+++.|+.++|+.   +++|+|++++| 
T Consensus        60 ~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~----~~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni  132 (277)
T cd06917          60 QPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKA----GPIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANI  132 (277)
T ss_pred             CCCCeeeEeeeeeeCCEEEEEEecCCCCcHHHHHHc----cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHE
Confidence            499999999999876655556566655544433321    2478899999999999999999999   99999999999 


Q ss_pred             ---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                               ++|||.+.........  .....++..|+||
T Consensus       133 ~i~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~y~aP  170 (277)
T cd06917         133 LVTNTGNVKLCDFGVAALLNQNSSK--RSTFVGTPYWMAP  170 (277)
T ss_pred             EEcCCCCEEEccCCceeecCCCccc--cccccCCcceeCH
Confidence                     4789887665443321  2233567777776

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.52  E-value=1.5e-14  Score=84.12  Aligned_cols=105  Identities=24%  Similarity=0.345  Sum_probs=74.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++.+++........+++++..+.+...+...   ..+++..+..++.|++.|+.++|+.   +++|+|+++.|
T Consensus        59 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~n  132 (265)
T cd06631          59 LKHVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRF---GPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNN  132 (265)
T ss_pred             cCCCCEeeEeeEeecCCeEEEEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHh
Confidence            57999999999998876666666666655554444322   2378888999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcc----cccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAA----RLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~----~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+........    ........++..|+||
T Consensus       133 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  177 (265)
T cd06631         133 VMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAP  177 (265)
T ss_pred             EEECCCCeEEeccchhhHhhhhccccccccccccccCCCccccCh
Confidence                      378887765422110    0011234567777776

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.52  E-value=2.7e-14  Score=82.72  Aligned_cols=87  Identities=26%  Similarity=0.379  Sum_probs=64.0

Q ss_pred             CCCccceeeeeeeeeCC-ccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEGN-LRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~   79 (111)
                      ++|+|++++++++...+ ....+.+++..+.+...+... ....+++.....++.+++.|+.++|++   +++|+|++|+
T Consensus        56 l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~  131 (256)
T cd05082          56 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAAR  131 (256)
T ss_pred             CCCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchh
Confidence            57999999999875433 334455555555554443322 223378889999999999999999999   9999999999


Q ss_pred             C----------cCCCcccccCC
Q 047898           80 N----------IADFNLSNQAP   91 (111)
Q Consensus        80 n----------i~~~g~~~~~~   91 (111)
                      |          ++|||.++...
T Consensus       132 nil~~~~~~~kl~dfg~~~~~~  153 (256)
T cd05082         132 NVLVSEDNVAKVSDFGLTKEAS  153 (256)
T ss_pred             eEEEcCCCcEEecCCccceecc
Confidence            9          37899876543

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.52  E-value=2.6e-14  Score=83.41  Aligned_cols=86  Identities=23%  Similarity=0.307  Sum_probs=64.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++.... ...+++++..+.+...+...  ...+++.+...++.+++.|+.|+|+.   +++|+|++++|
T Consensus        64 ~~h~~i~~~~~~~~~~~-~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~n  137 (270)
T cd05056          64 FDHPHIVKLIGVITENP-VWIVMELAPLGELRSYLQVN--KYSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARN  137 (270)
T ss_pred             CCCCchhceeEEEcCCC-cEEEEEcCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChhe
Confidence            57999999999987643 34455555555554444322  22378899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCC
Q 047898           81 ----------IADFNLSNQAPN   92 (111)
Q Consensus        81 ----------i~~~g~~~~~~~   92 (111)
                                +.|||.++....
T Consensus       138 ili~~~~~~~l~d~g~~~~~~~  159 (270)
T cd05056         138 VLVSSPDCVKLGDFGLSRYLED  159 (270)
T ss_pred             EEEecCCCeEEccCceeeeccc
Confidence                      378888765443

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.52  E-value=2e-14  Score=84.37  Aligned_cols=85  Identities=26%  Similarity=0.432  Sum_probs=62.8

Q ss_pred             CCCccceeeeeeeeeCCc--cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 047898            1 LKHENLVELLGYCVEGNL--RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRS   78 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~   78 (111)
                      ++||||+++.+++.....  ...+++++..+.+.....   . ..+++.++..++.|++.|+.|+|+.   +++|+|++|
T Consensus        63 l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~---~-~~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp  135 (283)
T cd05080          63 LYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLP---K-HKLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAA  135 (283)
T ss_pred             CCCCCEeeEEEEEecCCCceEEEEecCCCCCCHHHHHH---H-cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCh
Confidence            589999999998875432  223444444443333322   1 2388999999999999999999999   999999999


Q ss_pred             CC----------cCCCcccccCCC
Q 047898           79 SN----------IADFNLSNQAPN   92 (111)
Q Consensus        79 ~n----------i~~~g~~~~~~~   92 (111)
                      +|          +.|||.++....
T Consensus       136 ~Nili~~~~~~~l~dfg~~~~~~~  159 (283)
T cd05080         136 RNVLLDNDRLVKIGDFGLAKAVPE  159 (283)
T ss_pred             heEEEcCCCcEEEeecccccccCC
Confidence            99          378998875543

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.51  E-value=3.4e-14  Score=82.02  Aligned_cols=86  Identities=27%  Similarity=0.419  Sum_probs=65.8

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++...+....+++++..+.+...+...  ...++......++.+++.++.++|++   +++|+|++++|
T Consensus        49 l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~n  123 (251)
T cd05041          49 YDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKK--KNRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARN  123 (251)
T ss_pred             CCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcce
Confidence            57999999999998877666666666555444333221  12377888899999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCC
Q 047898           81 ----------IADFNLSNQAP   91 (111)
Q Consensus        81 ----------i~~~g~~~~~~   91 (111)
                                ++|||.+....
T Consensus       124 ili~~~~~~~l~d~g~~~~~~  144 (251)
T cd05041         124 CLVGENNVLKISDFGMSREEE  144 (251)
T ss_pred             EEEcCCCcEEEeecccccccc
Confidence                      37888876543

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.51  E-value=3.4e-15  Score=94.30  Aligned_cols=102  Identities=26%  Similarity=0.345  Sum_probs=78.4

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCc
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI   81 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~ni   81 (111)
                      +|+|||.++|.+......++-.++...+.+.+..+.   -..+++.|....+...+.|+.|+|+.   +=+|||+|..||
T Consensus        70 ~h~nivay~gsylr~dklwicMEycgggslQdiy~~---TgplselqiayvcRetl~gl~ylhs~---gk~hRdiKGani  143 (829)
T KOG0576|consen   70 RHPNIVAYFGSYLRRDKLWICMEYCGGGSLQDIYHV---TGPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANI  143 (829)
T ss_pred             CCcChHHHHhhhhhhcCcEEEEEecCCCcccceeee---cccchhHHHHHHHhhhhccchhhhcC---Ccccccccccce
Confidence            699999999999987766665555554444433322   12288889999999999999999999   888999999994


Q ss_pred             ----------CCCcccccCCCCcccccccccCccccccCC
Q 047898           82 ----------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        82 ----------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                .|||++..+...-..  ...+.||++||||
T Consensus       144 lltd~gDvklaDfgvsaqitati~K--rksfiGtpywmap  181 (829)
T KOG0576|consen  144 LLTDEGDVKLADFGVSAQITATIAK--RKSFIGTPYWMAP  181 (829)
T ss_pred             eecccCceeecccCchhhhhhhhhh--hhcccCCccccch
Confidence                      799998776554322  4567899999998

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.51  E-value=1.1e-14  Score=84.19  Aligned_cols=105  Identities=23%  Similarity=0.291  Sum_probs=74.3

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++.+........+++++....+...+..... ..+++.....++.+++.|+.|+|+.   +++|+|+++.|
T Consensus        56 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~n  131 (257)
T cd08225          56 MKHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRG-VLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQN  131 (257)
T ss_pred             CCCCChhhhhheeccCCeEEEEEecCCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHH
Confidence            5799999999999887766666666655544443332222 2378899999999999999999999   99999999999


Q ss_pred             c-----------CCCcccccCCCCcccccccccCccccccCC
Q 047898           81 I-----------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 i-----------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |           +|||.+.........  .....++..|+||
T Consensus       132 il~~~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~~~ap  171 (257)
T cd08225         132 IFLSKNGMVAKLGDFGIARQLNDSMEL--AYTCVGTPYYLSP  171 (257)
T ss_pred             EEEcCCCCeEEecccccchhccCCccc--ccccCCCccccCH
Confidence            3           677766544332211  1223466777776

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.51  E-value=1.9e-14  Score=84.35  Aligned_cols=104  Identities=20%  Similarity=0.208  Sum_probs=73.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++.+++...+....+.+++..+.+...+..... ..++..++..++.|++.|+.|+|+.   +++|+|+++.|
T Consensus        50 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~N  125 (277)
T cd05577          50 VSSRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGE-PGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPEN  125 (277)
T ss_pred             CCCCCEeeeeeEEecCCeEEEEEecCCCCcHHHHHHHcCc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHH
Confidence            5799999999999887656566666655444433332221 2488899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+........   .....++..|++|
T Consensus       126 il~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~y~~P  163 (277)
T cd05577         126 VLLDDHGNVRISDLGLAVELKGGKK---IKGRAGTPGYMAP  163 (277)
T ss_pred             EEECCCCCEEEccCcchhhhccCCc---cccccCCCCcCCH
Confidence                      378888765432211   1223455566665

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.51  E-value=1.7e-14  Score=86.37  Aligned_cols=77  Identities=23%  Similarity=0.305  Sum_probs=60.5

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||++++++|..++....+++++..+.+...+..... ..++...+..++.|++.|+.|+|++   +++|+|++|+|
T Consensus        56 l~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~N  131 (328)
T cd08226          56 FRHPNIMTSWTVFTTGSWLWVISPFMAYGSANSLLKTYFP-EGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASH  131 (328)
T ss_pred             CCCCCcceEeeeEecCCceEEEEecccCCCHHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHH
Confidence            5799999999999987766566666655555444433222 2378888889999999999999999   99999999999


Q ss_pred             c
Q 047898           81 I   81 (111)
Q Consensus        81 i   81 (111)
                      |
T Consensus       132 i  132 (328)
T cd08226         132 I  132 (328)
T ss_pred             E
Confidence            4

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.51  E-value=2.4e-14  Score=85.30  Aligned_cols=86  Identities=26%  Similarity=0.251  Sum_probs=65.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++.......+++++...+.+...+... ....+++.....++.|++.|+.|+|+.   +++|+|++++|
T Consensus        58 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~N  133 (316)
T cd05574          58 LDHPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQ-PGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPEN  133 (316)
T ss_pred             CCCCCchhheeeeecCCEEEEEEEecCCCCHHHHHHhC-CCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHH
Confidence            57999999999998877666666665555544443322 223488899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccC
Q 047898           81 ----------IADFNLSNQA   90 (111)
Q Consensus        81 ----------i~~~g~~~~~   90 (111)
                                +.|||.+...
T Consensus       134 ili~~~~~~~l~dfg~~~~~  153 (316)
T cd05574         134 ILLHESGHIMLSDFDLSKQS  153 (316)
T ss_pred             eEEcCCCCEEEeecchhhcc
Confidence                      3678876543

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.51  E-value=3.2e-14  Score=82.26  Aligned_cols=106  Identities=26%  Similarity=0.354  Sum_probs=73.5

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++...+....+++++..+.+...+..... ..+++.+...++.|++.++.++|+.   +++|+|++++|
T Consensus        58 l~~~~i~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~n  133 (258)
T smart00219       58 LDHPNIVKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRP-KELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARN  133 (258)
T ss_pred             cCCCchheEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhh-ccCCHHHHHHHHHHHHHHHHHHhcC---Ceeecccccce
Confidence            4799999999999887655555555544444333322221 1178999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+.......... .....++..|+||
T Consensus       134 il~~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~y~~P  173 (258)
T smart00219      134 CLVGENLVVKISDFGLSRDLYDDDYYK-KKGGKLPIRWMAP  173 (258)
T ss_pred             EEEccCCeEEEcccCCceecccccccc-cccCCCcccccCh
Confidence                      37898876654432211 1112245677776

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.51  E-value=3.2e-14  Score=82.90  Aligned_cols=105  Identities=23%  Similarity=0.337  Sum_probs=70.0

Q ss_pred             CCCccceeeeeeeeeCCc--cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 047898            1 LKHENLVELLGYCVEGNL--RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRS   78 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~   78 (111)
                      ++||||+++++++.....  ...+++++..+.+...+..   ...++......++.|++.|+.++|+.   +++|+|+++
T Consensus        61 l~h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p  134 (266)
T cd06651          61 LQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKA---YGALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKG  134 (266)
T ss_pred             cCCCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCH
Confidence            589999999999875332  2223344443333333322   22378888889999999999999999   999999999


Q ss_pred             CC----------cCCCcccccCCCCcc-cccccccCccccccCC
Q 047898           79 SN----------IADFNLSNQAPNMAA-RLHSTRVLGTFSYHAP  111 (111)
Q Consensus        79 ~n----------i~~~g~~~~~~~~~~-~~~~~~~~~~~~~~aP  111 (111)
                      +|          ++|||+++....... ........++..|+||
T Consensus       135 ~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aP  178 (266)
T cd06651         135 ANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSP  178 (266)
T ss_pred             HHEEECCCCCEEEccCCCccccccccccCCccccCCccccccCH
Confidence            99          478998765432211 1011223467778876

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.51  E-value=2.2e-14  Score=84.24  Aligned_cols=104  Identities=23%  Similarity=0.235  Sum_probs=75.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++.+++..++....+++++....+.....   ....++..+...++.+++.|+.++|..   +++|+|++++|
T Consensus        57 l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~n  130 (288)
T cd07833          57 LRHENIVNLKEAFRRKGRLYLVFEYVERTLLELLEA---SPGGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPEN  130 (288)
T ss_pred             cCCCCeeehhheEEECCEEEEEEecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHH
Confidence            479999999999998776666666665433322221   223378899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+......... ......++..|+||
T Consensus       131 i~~~~~~~~kl~d~g~~~~~~~~~~~-~~~~~~~~~~~~~P  170 (288)
T cd07833         131 ILVSESGVLKLCDFGFARALRARPAS-PLTDYVATRWYRAP  170 (288)
T ss_pred             eEECCCCCEEEEeeecccccCCCccc-cccCcccccCCcCC
Confidence                      4788887765543321 12234566778877

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.51  E-value=2.4e-14  Score=86.27  Aligned_cols=65  Identities=22%  Similarity=0.361  Sum_probs=47.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           44 LDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        44 l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +++.++..++.|++.|+.|+|+.   +++|+|++|.|          ++|||++................++..|+||
T Consensus       176 ~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  250 (343)
T cd05103         176 LTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP  250 (343)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECc
Confidence            67888889999999999999999   99999999999          4789988765333221111222345567776

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.50  E-value=3.5e-14  Score=82.23  Aligned_cols=86  Identities=29%  Similarity=0.485  Sum_probs=66.8

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++........+.+++..+.+...+..... ..+++.+...++.|++.|+.|+|+.   +++|+|+++.|
T Consensus        57 l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~N  132 (256)
T cd05039          57 LRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGR-AVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARN  132 (256)
T ss_pred             cCCcceeeeEEEEcCCCCeEEEEEecCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---Cccchhcccce
Confidence            5799999999999876655556666655555444432221 2488999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccC
Q 047898           81 ----------IADFNLSNQA   90 (111)
Q Consensus        81 ----------i~~~g~~~~~   90 (111)
                                ++|||.++..
T Consensus       133 ili~~~~~~~l~d~g~~~~~  152 (256)
T cd05039         133 VLVSEDLVAKVSDFGLAKEA  152 (256)
T ss_pred             EEEeCCCCEEEccccccccc
Confidence                      3788887655

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.50  E-value=5.6e-14  Score=83.86  Aligned_cols=99  Identities=27%  Similarity=0.359  Sum_probs=70.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+|++++.+++.+......+++++. +.+......  ....+++.++..++.+++.|+.|+|+.   +++|+|++++|
T Consensus        82 l~h~~iv~~~~~~~~~~~~~lv~e~~~-g~l~~~~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~N  155 (317)
T cd06635          82 IKHPNSIEYKGCYLREHTAWLVMEYCL-GSASDLLEV--HKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGN  155 (317)
T ss_pred             CCCCCEEEEEEEEeeCCeEEEEEeCCC-CCHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCccc
Confidence            579999999999988766555555553 222222211  122378899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+......      ....++..|+||
T Consensus       156 il~~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aP  190 (317)
T cd06635         156 ILLTEPGQVKLADFGSASIASPA------NSFVGTPYWMAP  190 (317)
T ss_pred             EEECCCCCEEEecCCCccccCCc------ccccCCccccCh
Confidence                      3788876543221      123456667766

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.50  E-value=8.9e-15  Score=81.44  Aligned_cols=104  Identities=25%  Similarity=0.263  Sum_probs=73.4

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcC-CCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQ-GAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ..|++|.++|...+.+.-++..+.|+.. +..+.. -.......++...-+++..++.|+.|||++.  .++|||+||+|
T Consensus       103 ~CPf~V~FyGa~~regdvwIcME~M~tS-ldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsN  179 (282)
T KOG0984|consen  103 DCPFTVHFYGALFREGDVWICMELMDTS-LDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSN  179 (282)
T ss_pred             CCCeEEEeehhhhccccEEEeHHHhhhh-HHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcce
Confidence            4588999999777655555555555532 222111 1123344788888999999999999999986  89999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||++..+.+.--   .+--.|...||||
T Consensus       180 iLIn~~GqVKiCDFGIsG~L~dSiA---kt~daGCkpYmaP  217 (282)
T KOG0984|consen  180 ILINYDGQVKICDFGISGYLVDSIA---KTMDAGCKPYMAP  217 (282)
T ss_pred             EEEccCCcEEEcccccceeehhhhH---HHHhcCCCccCCh
Confidence                      489999887654321   2224678889988

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.50  E-value=3.6e-14  Score=82.36  Aligned_cols=87  Identities=24%  Similarity=0.349  Sum_probs=67.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+|++++++++........+++++..+.+....... ....+++.++..++.+++.|+.++|++   +++|+|++++|
T Consensus        58 l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~-~~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~n  133 (261)
T cd05034          58 LRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSG-EGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARN  133 (261)
T ss_pred             CCCCCEeeeeeeeecCCceEEEEeccCCCCHHHHHhcc-ccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchhe
Confidence            57999999999998766665666666555554444332 223488999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCC
Q 047898           81 ----------IADFNLSNQAP   91 (111)
Q Consensus        81 ----------i~~~g~~~~~~   91 (111)
                                +.|||.+....
T Consensus       134 ili~~~~~~~l~d~g~~~~~~  154 (261)
T cd05034         134 ILVGENLVCKIADFGLARLIE  154 (261)
T ss_pred             EEEcCCCCEEECccccceecc
Confidence                      37888876554

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.50  E-value=5.3e-14  Score=81.89  Aligned_cols=105  Identities=21%  Similarity=0.276  Sum_probs=70.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++.... ...+++++..+++...+... ....+++.+...++.+++.|+.++|+.   +++|+|++|+|
T Consensus        58 l~~~~i~~~~~~~~~~~-~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~N  132 (262)
T cd05071          58 LRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGE-MGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAAN  132 (262)
T ss_pred             CCCCCcceEEEEECCCC-cEEEEEcCCCCcHHHHHhhc-cccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCccc
Confidence            57999999999875432 33444555444444443322 223378889999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.++........ ......++..|+||
T Consensus       133 ill~~~~~~~L~dfg~~~~~~~~~~~-~~~~~~~~~~y~~P  172 (262)
T cd05071         133 ILVGENLVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAP  172 (262)
T ss_pred             EEEcCCCcEEeccCCceeeccccccc-cccCCcccceecCH
Confidence                      4788887654332211 11122345667776

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.50  E-value=6.7e-14  Score=81.31  Aligned_cols=105  Identities=21%  Similarity=0.264  Sum_probs=70.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+|++++++++.. +....+++++..+++...+... ....+++..+..++.+++.|+.|+|+.   +++|+|+++.|
T Consensus        58 l~h~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~N  132 (260)
T cd05069          58 LRHDKLVPLYAVVSE-EPIYIVTEFMGKGSLLDFLKEG-DGKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAAN  132 (260)
T ss_pred             CCCCCeeeEEEEEcC-CCcEEEEEcCCCCCHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcce
Confidence            579999999998754 3344444555544444433322 223378888999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                +.|||.+......... ......++..|+||
T Consensus       133 ill~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~~P  172 (260)
T cd05069         133 ILVGDNLVCKIADFGLARLIEDNEYT-ARQGAKFPIKWTAP  172 (260)
T ss_pred             EEEcCCCeEEECCCccceEccCCccc-ccCCCccchhhCCH
Confidence                      3789987654322111 11122345567766

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.50  E-value=3.6e-14  Score=84.19  Aligned_cols=83  Identities=19%  Similarity=0.251  Sum_probs=64.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++.+..++...++++++..+.+...+..   ...+++.....++.+++.|+.|+|+.   +++|+|++|+|
T Consensus        58 ~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~N  131 (305)
T cd05609          58 AENPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKN---IGALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDN  131 (305)
T ss_pred             CCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHH
Confidence            5799999999999887655566666665554444322   22378888888999999999999999   99999999999


Q ss_pred             c----------CCCccccc
Q 047898           81 I----------ADFNLSNQ   89 (111)
Q Consensus        81 i----------~~~g~~~~   89 (111)
                      |          .|||.++.
T Consensus       132 Ill~~~~~~~l~dfg~~~~  150 (305)
T cd05609         132 LLITSMGHIKLTDFGLSKI  150 (305)
T ss_pred             EEECCCCCEEEeeCCCccc
Confidence            3          78887753

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.50  E-value=2.3e-14  Score=82.92  Aligned_cols=102  Identities=25%  Similarity=0.339  Sum_probs=73.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++.+++........+++++..+++...+..   ...+++.+...++.|++.|+.++|+.   +++|+|++++|
T Consensus        59 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~n  132 (258)
T cd06632          59 LQHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKK---YGSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGAN  132 (258)
T ss_pred             cCCCCchheeeeEecCCeEEEEEEecCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHH
Confidence            4799999999999877666666666655444333322   22378888889999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+........   .....++..|++|
T Consensus       133 i~~~~~~~~kl~d~~~~~~~~~~~~---~~~~~~~~~y~~p  170 (258)
T cd06632         133 ILVDTNGVVKLADFGMAKQVVEFSF---AKSFKGSPYWMAP  170 (258)
T ss_pred             EEECCCCCEEEccCccceecccccc---ccccCCCcceeCH
Confidence                      378887765433321   2234466667765

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.50  E-value=4.5e-14  Score=82.74  Aligned_cols=102  Identities=22%  Similarity=0.346  Sum_probs=74.8

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++.+++.++....++++++..+.+...+.   . ..++..+...++.+++.|+.++|+.   +++|+|++|+|
T Consensus        59 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~---~-~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~N  131 (277)
T cd06640          59 CDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLR---A-GPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAAN  131 (277)
T ss_pred             CCCCCEeeEEEEEEECCEEEEEEecCCCCcHHHHHh---c-CCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhh
Confidence            479999999999998776666666666555444332   1 2378888899999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+.........  .....++..|+||
T Consensus       132 il~~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~y~ap  170 (277)
T cd06640         132 VLLSEQGDVKLADFGVAGQLTDTQIK--RNTFVGTPFWMAP  170 (277)
T ss_pred             EEEcCCCCEEEcccccceeccCCccc--cccccCcccccCH
Confidence                      4789887655432211  1223456667765

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.50  E-value=2.1e-14  Score=83.71  Aligned_cols=105  Identities=27%  Similarity=0.374  Sum_probs=75.5

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCC-CCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeecCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGA-QPSPVLDWMTRVRIVVDALRGLEYLHE-KVQPSIIQRDIRS   78 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~i~~~l~~lh~-~~~~~i~h~~l~~   78 (111)
                      ++|+||+++++++...+....+++++..+.+...+... .....++..++..++.|++.++.++|+ .   +++|+|+++
T Consensus        66 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---~i~H~dl~~  142 (269)
T cd08528          66 LRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK---RIVHRDLTP  142 (269)
T ss_pred             CCCCCeeeEEeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC---ceeecCCCH
Confidence            47999999999999877666666766554443332211 122348888999999999999999996 5   799999999


Q ss_pred             CC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           79 SN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        79 ~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +|          ++|||.+........   .....++..|++|
T Consensus       143 ~nil~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~~~P  182 (269)
T cd08528         143 NNIMLGEDDKVTITDFGLAKQKQPESK---LTSVVGTILYSCP  182 (269)
T ss_pred             HHEEECCCCcEEEecccceeecccccc---cccccCcccCcCh
Confidence            99          388998875443321   2334566777776

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.50  E-value=8.2e-14  Score=81.34  Aligned_cols=88  Identities=26%  Similarity=0.425  Sum_probs=60.6

Q ss_pred             CCCccceeeeeeeeeCCccc------hhhhhhhhhhcccCcCC---CCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCe
Q 047898            1 LKHENLVELLGYCVEGNLRD------ELIWIIHVITCKKGVQG---AQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSI   71 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i   71 (111)
                      ++||||+++++++.......      .+.+++..+.+...+..   ......++......++.|++.|+.|+|+.   ++
T Consensus        58 l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i  134 (273)
T cd05074          58 FDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NF  134 (273)
T ss_pred             CCCCCcceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CE
Confidence            58999999999887543221      12223323332221110   11122378888999999999999999999   99


Q ss_pred             eecCCCCCC----------cCCCcccccCC
Q 047898           72 IQRDIRSSN----------IADFNLSNQAP   91 (111)
Q Consensus        72 ~h~~l~~~n----------i~~~g~~~~~~   91 (111)
                      +|+|++|+|          +.|||.++...
T Consensus       135 ~H~dikp~nili~~~~~~kl~dfg~~~~~~  164 (273)
T cd05074         135 IHRDLAARNCMLNENMTVCVADFGLSKKIY  164 (273)
T ss_pred             eecccchhhEEEcCCCCEEECccccccccc
Confidence            999999999          47999887654

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.49  E-value=2.2e-14  Score=83.59  Aligned_cols=105  Identities=29%  Similarity=0.393  Sum_probs=71.2

Q ss_pred             CCccceeeeeeeeeCCc------cchhhhhhhhhhcccCcCCCC-CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeec
Q 047898            2 KHENLVELLGYCVEGNL------RDELIWIIHVITCKKGVQGAQ-PSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQR   74 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~   74 (111)
                      +|+||+++++++.....      ..++++++..+.+........ ....++...+..++.|++.|+.|+|+.   +++|+
T Consensus        61 ~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~  137 (275)
T cd06608          61 NHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHR  137 (275)
T ss_pred             CCCChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccC
Confidence            69999999999986543      234445544443333322211 123478899999999999999999999   99999


Q ss_pred             CCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           75 DIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        75 ~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |++++|          +.|||.+.........  .....++..|+||
T Consensus       138 ~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~y~aP  182 (275)
T cd06608         138 DIKGQNILLTKNAEVKLVDFGVSAQLDSTLGR--RNTFIGTPYWMAP  182 (275)
T ss_pred             CCCHHHEEEccCCeEEECCCccceecccchhh--hcCccccccccCH
Confidence            999999          3788877654332211  2234566777776

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.49  E-value=7.4e-14  Score=80.78  Aligned_cols=102  Identities=25%  Similarity=0.368  Sum_probs=72.1

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCc
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI   81 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~ni   81 (111)
                      +.|.||+.+|+|..+..-++-.+.|.. ....++.+...  .+++...-.+...++.|+.||-.+.  +++|||+||+||
T Consensus       149 dcpyIV~c~GyFi~n~dV~IcMelMs~-C~ekLlkrik~--piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNI  223 (391)
T KOG0983|consen  149 DCPYIVQCFGYFITNTDVFICMELMST-CAEKLLKRIKG--PIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNI  223 (391)
T ss_pred             CCCeeeeeeeEEeeCchHHHHHHHHHH-HHHHHHHHhcC--CchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccce
Confidence            358999999999986544333344433 33444433322  2777777778888999999998764  899999999994


Q ss_pred             ----------CCCcccccCCCCcccccccccCccccccCC
Q 047898           82 ----------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        82 ----------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                +|||++..+....-   .+...|...||||
T Consensus       224 LlDe~GniKlCDFGIsGrlvdSkA---htrsAGC~~YMaP  260 (391)
T KOG0983|consen  224 LLDERGNIKLCDFGISGRLVDSKA---HTRSAGCAAYMAP  260 (391)
T ss_pred             EEccCCCEEeecccccceeecccc---cccccCCccccCc
Confidence                      89999877654432   2344688999998

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.49  E-value=3.5e-14  Score=82.63  Aligned_cols=105  Identities=23%  Similarity=0.299  Sum_probs=70.3

Q ss_pred             CCCccceeeeeeeeeCCc--cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 047898            1 LKHENLVELLGYCVEGNL--RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRS   78 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~   78 (111)
                      ++|+||+++++++.+...  ...+++++..+.+...+..   ...++......++.+++.++.++|++   +++|+|+++
T Consensus        61 l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p  134 (265)
T cd06652          61 LLHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKS---YGALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKG  134 (265)
T ss_pred             cCCCCeeeEEeEeccCCCceEEEEEEecCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCH
Confidence            579999999998876432  2233344444444333322   22367788889999999999999999   999999999


Q ss_pred             CC----------cCCCcccccCCCCcccc-cccccCccccccCC
Q 047898           79 SN----------IADFNLSNQAPNMAARL-HSTRVLGTFSYHAP  111 (111)
Q Consensus        79 ~n----------i~~~g~~~~~~~~~~~~-~~~~~~~~~~~~aP  111 (111)
                      +|          ++|||.++......... ......++..|+||
T Consensus       135 ~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aP  178 (265)
T cd06652         135 ANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSP  178 (265)
T ss_pred             HHEEecCCCCEEECcCccccccccccccccccccCCCCccccCh
Confidence            99          47999877543221110 01223567778877

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.49  E-value=4.5e-14  Score=82.75  Aligned_cols=102  Identities=23%  Similarity=0.329  Sum_probs=73.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++..+.....+++++..+.+...+.    ...+++.++..++.+++.++.++|+.   +++|+|+++.|
T Consensus        59 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~----~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~N  131 (277)
T cd06641          59 CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE----PGPLDETQIATILREILKGLDYLHSE---KKIHRDIKAAN  131 (277)
T ss_pred             cCCCCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHh
Confidence            579999999999998776666666665444433321    22378889999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                +.|||.+.........  .....++..|+||
T Consensus       132 i~i~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~y~~P  170 (277)
T cd06641         132 VLLSEHGEVKLADFGVAGQLTDTQIK--RNTFVGTPFWMAP  170 (277)
T ss_pred             EEECCCCCEEEeecccceecccchhh--hccccCCccccCh
Confidence                      4788877654332211  2233556677776

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.49  E-value=6.2e-14  Score=82.16  Aligned_cols=86  Identities=23%  Similarity=0.396  Sum_probs=64.8

Q ss_pred             CCCccceeeeeeeeeCC--ccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 047898            1 LKHENLVELLGYCVEGN--LRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRS   78 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~   78 (111)
                      ++|+||+++.+++...+  ....+.+++..+.+...+....  ..+++.++..++.|++.|+.++|+.   +++|+|+++
T Consensus        63 l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p  137 (284)
T cd05038          63 LDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHR--DQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAA  137 (284)
T ss_pred             CCCCChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCc--cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCH
Confidence            57999999999987633  3344445555444444443222  1388899999999999999999999   999999999


Q ss_pred             CC----------cCCCcccccCC
Q 047898           79 SN----------IADFNLSNQAP   91 (111)
Q Consensus        79 ~n----------i~~~g~~~~~~   91 (111)
                      +|          ++|||.+....
T Consensus       138 ~nil~~~~~~~~l~dfg~~~~~~  160 (284)
T cd05038         138 RNILVESEDLVKISDFGLAKVLP  160 (284)
T ss_pred             HhEEEcCCCCEEEcccccccccc
Confidence            99          37898887654

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.49  E-value=4.2e-14  Score=82.87  Aligned_cols=101  Identities=21%  Similarity=0.299  Sum_probs=70.6

Q ss_pred             CCccceeeeeeeeeC--CccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 047898            2 KHENLVELLGYCVEG--NLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSS   79 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~   79 (111)
                      +|+|++++++++.+.  +....+.+++. +.+...+...  ...+++.++..++.|++.|+.++|+.   +++|+|+++.
T Consensus        56 ~h~~i~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~  129 (282)
T cd07831          56 PHPNILRLIEVLFDRKTGRLALVFELMD-MNLYELIKGR--KRPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPE  129 (282)
T ss_pred             CCCCccceEEEEecCCCCcEEEEEecCC-ccHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHH
Confidence            499999999999876  44444445443 2222222211  13488999999999999999999999   9999999999


Q ss_pred             C---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           80 N---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |         ++|||.+........   .....++..|+||
T Consensus       130 ni~l~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aP  167 (282)
T cd07831         130 NILIKDDILKLADFGSCRGIYSKPP---YTEYISTRWYRAP  167 (282)
T ss_pred             HEEEcCCCeEEEecccccccccCCC---cCCCCCCcccCCh
Confidence            9         368888765543322   1223466777776

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.49  E-value=2.7e-14  Score=82.87  Aligned_cols=103  Identities=25%  Similarity=0.344  Sum_probs=76.1

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHE-KVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~-~~~~~i~h~~l~~~   79 (111)
                      ++|+|++++++++...+....+++++..+.+...+...   ..++......++.|++.++.++|+ .   +++|+|++++
T Consensus        56 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~  129 (264)
T cd06623          56 CESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKV---GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPS  129 (264)
T ss_pred             cCCCCeeeEEEEEccCCeEEEEEEecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHH
Confidence            47999999999999877666666666655554444322   347889999999999999999999 8   9999999999


Q ss_pred             C----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           80 N----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |          ++|||.+.........  .....++..|+||
T Consensus       130 ni~~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~~p  169 (264)
T cd06623         130 NLLINSKGEVKIADFGISKVLENTLDQ--CNTFVGTVTYMSP  169 (264)
T ss_pred             HEEECCCCCEEEccCccceecccCCCc--ccceeecccccCH
Confidence            9          3788887765443322  1223456667765

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.49  E-value=8.5e-15  Score=84.98  Aligned_cols=106  Identities=21%  Similarity=0.287  Sum_probs=74.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCC-CCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQG-AQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~   79 (111)
                      ++||||+++++++.+......+++++....+...+.. ......+++.++..++.|++.|+.++|+.   +++|+|++++
T Consensus        59 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~  135 (260)
T cd08222          59 LDHPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAK  135 (260)
T ss_pred             CCCCcHHHHHHHHhcCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChh
Confidence            5799999999999876655555565554444332221 11223488999999999999999999999   9999999999


Q ss_pred             C---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           80 N---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |         ++|||.+.........  .....++..|+||
T Consensus       136 nili~~~~~~l~d~g~~~~~~~~~~~--~~~~~~~~~~~~p  174 (260)
T cd08222         136 NIFLKNNLLKIGDFGVSRLLMGSCDL--ATTFTGTPYYMSP  174 (260)
T ss_pred             heEeecCCEeecccCceeecCCCccc--ccCCCCCcCccCH
Confidence            9         3788887655433221  2233456667665

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.49  E-value=7.4e-14  Score=81.09  Aligned_cols=105  Identities=22%  Similarity=0.282  Sum_probs=70.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+|++++++++.. .....+++++..+++....... ....+++.+...++.+++.|+.|+|+.   +++|+|+++.|
T Consensus        58 l~~~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~N  132 (260)
T cd05070          58 LRHDKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKDG-EGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSAN  132 (260)
T ss_pred             cCCCceEEEEeEECC-CCcEEEEEecCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccce
Confidence            579999999998754 3334444555444444333221 223378899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                +.|||.+......... ......++..|+||
T Consensus       133 ili~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aP  172 (260)
T cd05070         133 ILVGDGLVCKIADFGLARLIEDNEYT-ARQGAKFPIKWTAP  172 (260)
T ss_pred             EEEeCCceEEeCCceeeeeccCcccc-cccCCCCCccccCh
Confidence                      4789887654332211 01122345567776

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.49  E-value=6.2e-14  Score=81.29  Aligned_cols=85  Identities=21%  Similarity=0.309  Sum_probs=63.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++.... ...+++++..+.+.+.+...   ..+++..+..++.|++.|+.++|..   +++|+|++++|
T Consensus        53 l~h~~iv~~~~~~~~~~-~~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~n  125 (257)
T cd05060          53 LDHPCIVRLIGVCKGEP-LMLVMELAPLGPLLKYLKKR---REIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARN  125 (257)
T ss_pred             cCCCCeeeEEEEEcCCc-eEEEEEeCCCCcHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccce
Confidence            57999999999886432 34444444444444443322   2478899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCC
Q 047898           81 ----------IADFNLSNQAPN   92 (111)
Q Consensus        81 ----------i~~~g~~~~~~~   92 (111)
                                ++|||.++....
T Consensus       126 ili~~~~~~kl~df~~~~~~~~  147 (257)
T cd05060         126 VLLVNRHQAKISDFGMSRALGA  147 (257)
T ss_pred             EEEcCCCcEEeccccccceeec
Confidence                      478988775543

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.49  E-value=8e-14  Score=82.64  Aligned_cols=105  Identities=24%  Similarity=0.333  Sum_probs=69.3

Q ss_pred             CCCccceeeeeeeeeCCcc--------chhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCee
Q 047898            1 LKHENLVELLGYCVEGNLR--------DELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSII   72 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~   72 (111)
                      ++||||+++++++...+..        .++++++.. .+...+..  ....+++.++..++.|++.|+.|+|+.   +++
T Consensus        68 l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~  141 (310)
T cd07865          68 LKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCEH-DLAGLLSN--KNVKFTLSEIKKVMKMLLNGLYYIHRN---KIL  141 (310)
T ss_pred             CCCCCccceEEEEecccccccCCCceEEEEEcCCCc-CHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHC---Cee
Confidence            5799999999998765432        223333321 11111111  122378999999999999999999999   999


Q ss_pred             ecCCCCCC----------cCCCcccccCCCCccc--ccccccCccccccCC
Q 047898           73 QRDIRSSN----------IADFNLSNQAPNMAAR--LHSTRVLGTFSYHAP  111 (111)
Q Consensus        73 h~~l~~~n----------i~~~g~~~~~~~~~~~--~~~~~~~~~~~~~aP  111 (111)
                      |+|++++|          ++|||.+.........  .......++..|+||
T Consensus       142 H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aP  192 (310)
T cd07865         142 HRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPP  192 (310)
T ss_pred             ccCCCHHHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCc
Confidence            99999999          4789987655332211  001223456778887

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.49  E-value=5.2e-14  Score=82.79  Aligned_cols=104  Identities=27%  Similarity=0.372  Sum_probs=74.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+|++++++++........+++++....+.+.+....  ..++..++..++.+++.|+.++|+.   +++|+|++|+|
T Consensus        72 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~n  146 (286)
T cd06614          72 CKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDN  146 (286)
T ss_pred             CCCCCeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhh
Confidence            579999999999998776666666666555544443322  2488999999999999999999999   99999999999


Q ss_pred             c----------CCCcccccCCCCcccccccccCccccccCC
Q 047898           81 I----------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 i----------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +          .|||.+.........  .....++..|++|
T Consensus       147 i~i~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~y~~P  185 (286)
T cd06614         147 ILLSKDGSVKLADFGFAAQLTKEKSK--RNSVVGTPYWMAP  185 (286)
T ss_pred             EEEcCCCCEEECccchhhhhccchhh--hccccCCcccCCH
Confidence            3          677776544322111  1223455667765

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.48  E-value=1.8e-14  Score=82.84  Aligned_cols=83  Identities=18%  Similarity=0.106  Sum_probs=64.5

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCc
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI   81 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~ni   81 (111)
                      .|||++++++++.+.+....+.+++..+.+...+..   ...+++.....++.|++.|+.|+|+.   +++|+|++|+|+
T Consensus        43 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Ni  116 (237)
T cd05576          43 CVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK---FLNIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNI  116 (237)
T ss_pred             CCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHE
Confidence            589999999999987766666666665555443322   22378899999999999999999999   999999999993


Q ss_pred             ----------CCCcccccC
Q 047898           82 ----------ADFNLSNQA   90 (111)
Q Consensus        82 ----------~~~g~~~~~   90 (111)
                                .|||.+...
T Consensus       117 l~~~~~~~~l~df~~~~~~  135 (237)
T cd05576         117 LLDDRGHIQLTYFSRWSEV  135 (237)
T ss_pred             EEcCCCCEEEecccchhcc
Confidence                      677765443

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.48  E-value=5e-14  Score=88.28  Aligned_cols=97  Identities=22%  Similarity=0.244  Sum_probs=72.6

Q ss_pred             cceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC----
Q 047898            5 NLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----   80 (111)
Q Consensus         5 ~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n----   80 (111)
                      |+|+++++|...+...+++|.+. ..+.+++.... ...++...+..++.|++.||.+||..   +|||.|+||+|    
T Consensus       249 n~Vrm~d~F~fr~HlciVfELL~-~NLYellK~n~-f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~  323 (586)
T KOG0667|consen  249 NIVRMLDYFYFRNHLCIVFELLS-TNLYELLKNNK-FRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLK  323 (586)
T ss_pred             eEEEeeeccccccceeeeehhhh-hhHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeec
Confidence            79999999999776666665554 23444444333 33389999999999999999999999   99999999999    


Q ss_pred             --------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 --------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 --------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                              |+|||.+-.....     ..+...+..|.||
T Consensus       324 ~~~r~~vKVIDFGSSc~~~q~-----vytYiQSRfYRAP  357 (586)
T KOG0667|consen  324 DPKRSRIKVIDFGSSCFESQR-----VYTYIQSRFYRAP  357 (586)
T ss_pred             cCCcCceeEEecccccccCCc-----ceeeeeccccccc
Confidence                    4899987654322     1245566777777

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.48  E-value=2e-14  Score=84.32  Aligned_cols=104  Identities=25%  Similarity=0.329  Sum_probs=69.7

Q ss_pred             CCccceeeeeeeeeCC------ccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecC
Q 047898            2 KHENLVELLGYCVEGN------LRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRD   75 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~   75 (111)
                      +|+||+++++++....      ...++++++..+.+........ ...+++..+..++.|++.|+.|+|+.   +++|+|
T Consensus        71 ~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~d  146 (282)
T cd06636          71 HHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTK-GNALKEDWIAYICREILRGLAHLHAH---KVIHRD  146 (282)
T ss_pred             CCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCC
Confidence            6999999999986432      1233444444444433333222 22377888888999999999999999   999999


Q ss_pred             CCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           76 IRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        76 l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      ++++|          +.|||.+.........  .....++..|+||
T Consensus       147 l~~~nili~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~y~aP  190 (282)
T cd06636         147 IKGQNVLLTENAEVKLVDFGVSAQLDRTVGR--RNTFIGTPYWMAP  190 (282)
T ss_pred             CCHHHEEECCCCCEEEeeCcchhhhhccccC--CCcccccccccCH
Confidence            99999          4788887654322111  2234566777776

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.48  E-value=6.5e-14  Score=81.10  Aligned_cols=105  Identities=21%  Similarity=0.319  Sum_probs=71.8

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||++++++++........+++++..+.+...+...  ...+++..+..++.+++.++.++|+.   +++|+|++++|
T Consensus        56 l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~n  130 (256)
T cd05112          56 LSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQ--RGKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARN  130 (256)
T ss_pred             CCCCCeeeEEEEEccCCceEEEEEcCCCCcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHHHHC---Cccccccccce
Confidence            57999999999998766555555555554443333221  12378888999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                +.|||.++........ ......++..|+||
T Consensus       131 i~i~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~~~aP  170 (256)
T cd05112         131 CLVGENQVVKVSDFGMTRFVLDDQYT-SSTGTKFPVKWSSP  170 (256)
T ss_pred             EEEcCCCeEEECCCcceeecccCccc-ccCCCccchhhcCH
Confidence                      4788887654332111 01122234567766

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.48  E-value=1.5e-14  Score=92.88  Aligned_cols=85  Identities=19%  Similarity=0.295  Sum_probs=59.4

Q ss_pred             CCccceeeeee-eeeCCc---cchhhhhhhhhh---cccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeec
Q 047898            2 KHENLVELLGY-CVEGNL---RDELIWIIHVIT---CKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQR   74 (111)
Q Consensus         2 ~h~~iv~l~~~-~~~~~~---~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~   74 (111)
                      .|+|||.+++. ......   .+.++..|+.+.   +.+++.. +.+..|++.+++.++.++++|+.+||.+ ++++|||
T Consensus        93 gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~-Rlq~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHR  170 (738)
T KOG1989|consen   93 GHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNT-RLQTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHR  170 (738)
T ss_pred             CCCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHH-HHhccCChHHHHHHHHHHHHHHHHHhcC-CCccchh
Confidence            39999999993 332211   123333444433   3333321 2233399999999999999999999998 5679999


Q ss_pred             CCCCCC----------cCCCcccc
Q 047898           75 DIRSSN----------IADFNLSN   88 (111)
Q Consensus        75 ~l~~~n----------i~~~g~~~   88 (111)
                      |||.+|          ++|||.+-
T Consensus       171 DLKiENvLls~~g~~KLCDFGSat  194 (738)
T KOG1989|consen  171 DLKIENVLLSADGNYKLCDFGSAT  194 (738)
T ss_pred             hhhhhheEEcCCCCEEeCcccccc
Confidence            999999          48999764

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.48  E-value=3.8e-14  Score=83.16  Aligned_cols=104  Identities=27%  Similarity=0.360  Sum_probs=72.3

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+|++++++++..+.....+++++. ..+...+... ....+++.++..++.|++.|+.++|+.   +++|+|++++|
T Consensus        55 l~~~~iv~~~~~~~~~~~~~iv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~n  129 (283)
T cd07835          55 LNHPNIVRLLDVVHSENKLYLVFEFLD-LDLKKYMDSS-PLTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQN  129 (283)
T ss_pred             cCCCCccCHhheeccCCeEEEEEeccC-cCHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHH
Confidence            579999999999988765556666653 2233222221 112488999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+.........  .....++..|+||
T Consensus       130 il~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~~~aP  168 (283)
T cd07835         130 LLIDREGALKLADFGLARAFGVPVRT--YTHEVVTLWYRAP  168 (283)
T ss_pred             EEEcCCCcEEEeecccccccCCCccc--cCccccccCCCCC
Confidence                      3788887654322111  1122346677776

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.48  E-value=3.6e-14  Score=83.43  Aligned_cols=101  Identities=23%  Similarity=0.324  Sum_probs=74.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHE-KVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~-~~~~~i~h~~l~~~   79 (111)
                      ++||||+++.+++...+....+++++..+.+......   ...+++..+..++.+++.++.|+|+ .   +++|+|++++
T Consensus        60 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~---~i~H~dl~p~  133 (284)
T cd06620          60 CRSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKK---GGPIPVEILGKIAVAVVEGLTYLYNVH---RIMHRDIKPS  133 (284)
T ss_pred             cCCCCcceEeeeEecCCEEEEEEecCCCCCHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHhc---CeeccCCCHH
Confidence            5799999999999987766667677765554433322   2237889999999999999999996 5   7999999999


Q ss_pred             C----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           80 N----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |          ++|||++.......    .....++..|+||
T Consensus       134 nil~~~~~~~~l~d~gl~~~~~~~~----~~~~~~~~~~~aP  171 (284)
T cd06620         134 NILVNSRGQIKLCDFGVSGELINSI----ADTFVGTSTYMSP  171 (284)
T ss_pred             HEEECCCCcEEEccCCcccchhhhc----cCccccCcccCCH
Confidence            9          47888775442221    1234567777776

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.48  E-value=3.9e-14  Score=83.44  Aligned_cols=103  Identities=22%  Similarity=0.174  Sum_probs=73.5

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +|+||+.+.+++........+++++..+.+...+..   ...++..++..++.|++.|+.++|+.   +++|+|++++| 
T Consensus        63 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~ni  136 (290)
T cd05613          63 QSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQ---RERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENI  136 (290)
T ss_pred             cCCChhceeeEeecCCeEEEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHe
Confidence            589999999999876655566666665544433322   22378888888899999999999999   99999999999 


Q ss_pred             ---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                               ++|||.++........ ......++..|+||
T Consensus       137 l~~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~y~aP  175 (290)
T cd05613         137 LLDSNGHVVLTDFGLSKEFHEDEVE-RAYSFCGTIEYMAP  175 (290)
T ss_pred             EECCCCCEEEeeCccceeccccccc-ccccccCCcccCCh
Confidence                     3789887654332111 11234567778776

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.48  E-value=4.6e-14  Score=83.43  Aligned_cols=102  Identities=24%  Similarity=0.358  Sum_probs=74.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+|++++++++..++....+.+++..+.+.....    ...+++.....++.|++.++.++|+.   +++|+|++++|
T Consensus        74 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~----~~~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~N  146 (292)
T cd06657          74 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT----HTRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDS  146 (292)
T ss_pred             cCCcchhheeeEEEeCCEEEEEEecCCCCcHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHH
Confidence            579999999999998776666666665554443321    12378888999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+.........  .....++..|++|
T Consensus       147 ilv~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~y~~p  185 (292)
T cd06657         147 ILLTHDGRVKLSDFGFCAQVSKEVPR--RKSLVGTPYWMAP  185 (292)
T ss_pred             EEECCCCCEEEcccccceeccccccc--ccccccCccccCH
Confidence                      3788877654432211  1223466677776

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.48  E-value=8.2e-14  Score=80.90  Aligned_cols=86  Identities=21%  Similarity=0.286  Sum_probs=62.8

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++.. +....+++++..+.+...+... ....+++.++..++.+++.|+.++|+.   +++|+|++|+|
T Consensus        58 l~h~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~n  132 (260)
T cd05067          58 LQHPRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-EGIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAAN  132 (260)
T ss_pred             cCCcCeeeEEEEEcc-CCcEEEEEcCCCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHh
Confidence            579999999998754 3234444554444444333222 223478889999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCC
Q 047898           81 ----------IADFNLSNQAP   91 (111)
Q Consensus        81 ----------i~~~g~~~~~~   91 (111)
                                +.|||.+....
T Consensus       133 i~i~~~~~~~l~dfg~~~~~~  153 (260)
T cd05067         133 ILVSETLCCKIADFGLARLIE  153 (260)
T ss_pred             EEEcCCCCEEEccCcceeecC
Confidence                      37888876544

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.48  E-value=3.9e-14  Score=87.37  Aligned_cols=82  Identities=17%  Similarity=0.138  Sum_probs=67.4

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +.|.||+++-.|++.+...++.+++..|+..-++..   ...|+...+.+|+.+++.|+.-+|..   +++||||||+| 
T Consensus       199 ds~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~~---~~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNl  272 (550)
T KOG0605|consen  199 DSPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLMR---KDTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNL  272 (550)
T ss_pred             CCCcEEEEEEEecCCCeeEEEEEecCCccHHHHHHh---cCcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhhe
Confidence            578999999999997766666666666655544443   34489999999999999999999999   99999999999 


Q ss_pred             ---------cCCCccccc
Q 047898           81 ---------IADFNLSNQ   89 (111)
Q Consensus        81 ---------i~~~g~~~~   89 (111)
                               ++|||++..
T Consensus       273 LiD~~GHiKLSDFGLs~g  290 (550)
T KOG0605|consen  273 LIDAKGHIKLSDFGLSTG  290 (550)
T ss_pred             eecCCCCEeeccccccch
Confidence                     489998743

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.48  E-value=5.9e-14  Score=82.74  Aligned_cols=105  Identities=28%  Similarity=0.349  Sum_probs=70.8

Q ss_pred             CCccceeeeeeeeeCCc-----cchhhhhhhhhhcccCcCCC-CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecC
Q 047898            2 KHENLVELLGYCVEGNL-----RDELIWIIHVITCKKGVQGA-QPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRD   75 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~   75 (111)
                      +|||++++++++...+.     ...+.+++..+++....... .....+++..+..++.|++.|+.++|+.   +++|+|
T Consensus        77 ~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~d  153 (291)
T cd06639          77 NHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRD  153 (291)
T ss_pred             CCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccC
Confidence            69999999999986432     23344554444443332211 1223378889999999999999999999   999999


Q ss_pred             CCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           76 IRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        76 l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      ++++|          ++|||.++........  .....++..|+||
T Consensus       154 lkp~nili~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aP  197 (291)
T cd06639         154 VKGNNILLTTEGGVKLVDFGVSAQLTSTRLR--RNTSVGTPFWMAP  197 (291)
T ss_pred             CCHHHEEEcCCCCEEEeecccchhccccccc--ccCccCCccccCh
Confidence            99999          3788887654432211  1223456667776

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.48  E-value=6.3e-14  Score=81.39  Aligned_cols=105  Identities=29%  Similarity=0.369  Sum_probs=75.3

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++.+.+....+.+++..+.+.+....   ...+++.....++.+++.|+.++|+.   +++|+|+++.|
T Consensus        56 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~n  129 (264)
T cd06626          56 LKHPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEH---GRILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPAN  129 (264)
T ss_pred             CCCCChhheeeeEecCCEEEEEEecCCCCcHHHHHhh---cCCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHH
Confidence            5799999999999887766666666665555444332   22367888889999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCccccc--ccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLH--STRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~--~~~~~~~~~~~aP  111 (111)
                                ++|||.+...........  .....++..|++|
T Consensus       130 il~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~P  172 (264)
T cd06626         130 IFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAP  172 (264)
T ss_pred             EEECCCCCEEEcccccccccCCCCCcccccccCCcCCcCccCh
Confidence                      478888766543322110  1123456677776

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.47  E-value=5.1e-14  Score=84.49  Aligned_cols=104  Identities=22%  Similarity=0.288  Sum_probs=68.2

Q ss_pred             CCccceeeeeeeeeC-Cccchhhhhhh--hhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 047898            2 KHENLVELLGYCVEG-NLRDELIWIIH--VITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRS   78 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~   78 (111)
                      +|+||+++++.+... .....++.+++  .+.+...+.   ....+++..+..++.|++.|+.|+|+.   +++|+|++|
T Consensus        60 ~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~---~~~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp  133 (332)
T cd07857          60 GHKNITCLYDMDIVFPGNFNELYLYEELMEADLHQIIR---SGQPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKP  133 (332)
T ss_pred             CCCChheeeeeeeeccccCCcEEEEEecccCCHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCH
Confidence            599999999876543 11112222222  122222221   223488899999999999999999999   999999999


Q ss_pred             CC----------cCCCcccccCCCCcccc--cccccCccccccCC
Q 047898           79 SN----------IADFNLSNQAPNMAARL--HSTRVLGTFSYHAP  111 (111)
Q Consensus        79 ~n----------i~~~g~~~~~~~~~~~~--~~~~~~~~~~~~aP  111 (111)
                      +|          ++|||.+..........  ......++..|+||
T Consensus       134 ~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aP  178 (332)
T cd07857         134 GNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAP  178 (332)
T ss_pred             HHeEEcCCCCEEeCcCCCceecccccccccccccCcccCccccCc
Confidence            99          47999887654322110  12234678888887

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.47  E-value=7.4e-14  Score=82.98  Aligned_cols=103  Identities=32%  Similarity=0.369  Sum_probs=69.0

Q ss_pred             CCCccceeeeeeeeeCCc--cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 047898            1 LKHENLVELLGYCVEGNL--RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRS   78 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~   78 (111)
                      ++|+|++++++++.....  ...+++++.. .+...+...  ...+++.+...++.|++.|+.|+|+.   +++|+|+++
T Consensus        63 l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p  136 (309)
T cd07845          63 LRHPNIVELKEVVVGKHLDSIFLVMEYCEQ-DLASLLDNM--PTPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKV  136 (309)
T ss_pred             CCCCCCcceEEEEecCCCCeEEEEEecCCC-CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCH
Confidence            579999999999876432  2233333321 222222221  13388899999999999999999999   999999999


Q ss_pred             CC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           79 SN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        79 ~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +|          ++|||.+.........  .....++..|+||
T Consensus       137 ~nil~~~~~~~kL~dfg~~~~~~~~~~~--~~~~~~~~~y~aP  177 (309)
T cd07845         137 SNLLLTDKGCLKIADFGLARTYGLPAKP--MTPKVVTLWYRAP  177 (309)
T ss_pred             HHEEECCCCCEEECccceeeecCCccCC--CCcccccccccCh
Confidence            99          4789988765433211  1122345667776

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.47  E-value=1.2e-13  Score=80.05  Aligned_cols=85  Identities=24%  Similarity=0.420  Sum_probs=62.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||++++.+++...+ ...+++++..+.+...+... ....++..++..++.|++.|+.++|+.   +++|+|++|+|
T Consensus        56 ~~~~~i~~~~~~~~~~~-~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~n  130 (254)
T cd05083          56 LHHKNLVRLLGVILHNG-LYIVMELMSKGNLVNFLRTR-GRALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARN  130 (254)
T ss_pred             CCCCCcCeEEEEEcCCC-cEEEEECCCCCCHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcce
Confidence            57999999999987644 33444444444443333222 222378888999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccC
Q 047898           81 ----------IADFNLSNQA   90 (111)
Q Consensus        81 ----------i~~~g~~~~~   90 (111)
                                ++|||.+...
T Consensus       131 ili~~~~~~kl~Dfg~~~~~  150 (254)
T cd05083         131 ILVSEDGVAKVSDFGLARVG  150 (254)
T ss_pred             EEEcCCCcEEECCCccceec
Confidence                      4788877643

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.47  E-value=1e-13  Score=80.59  Aligned_cols=86  Identities=19%  Similarity=0.284  Sum_probs=63.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++.+++.. .....+++++..+.+.+.+... ....+++.++..++.+++.|+.++|+.   +++|+|++++|
T Consensus        58 l~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~n  132 (260)
T cd05073          58 LQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAAN  132 (260)
T ss_pred             cCCCCcceEEEEEcC-CCeEEEEEeCCCCcHHHHHHhC-CccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcce
Confidence            579999999999877 3344455555544444443322 223378888999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCC
Q 047898           81 ----------IADFNLSNQAP   91 (111)
Q Consensus        81 ----------i~~~g~~~~~~   91 (111)
                                ++|||.+....
T Consensus       133 i~i~~~~~~~l~d~~~~~~~~  153 (260)
T cd05073         133 ILVSASLVCKIADFGLARVIE  153 (260)
T ss_pred             EEEcCCCcEEECCCcceeecc
Confidence                      47888776543

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.47  E-value=1.7e-14  Score=83.68  Aligned_cols=102  Identities=26%  Similarity=0.300  Sum_probs=74.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.++.....+.+++..+.+...+..   ...++..+...++.+++.|+.|+|++   +++|+|++++|
T Consensus        57 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~n  130 (258)
T cd05578          57 LNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQ---KVKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDN  130 (258)
T ss_pred             CCCCChHHHHHhhcCCCeEEEEEeCCCCCCHHHHHHh---cCCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHH
Confidence            5799999999999887766666666665554433322   23478889999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                +.|||.+........   .....++..|+||
T Consensus       131 il~~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~y~~P  168 (258)
T cd05578         131 ILLDEQGHVHITDFNIATKVTPDTL---TTSTSGTPGYMAP  168 (258)
T ss_pred             eEEcCCCCEEEeecccccccCCCcc---ccccCCChhhcCH
Confidence                      378887765543321   1223455667665

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.47  E-value=7.1e-14  Score=80.65  Aligned_cols=103  Identities=26%  Similarity=0.394  Sum_probs=73.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+|++++.+++.+.+....+++++....+.......   ..+++.....++.+++.++.++|+.   +++|+|++++|
T Consensus        56 l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~---~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~n  129 (254)
T cd06627          56 LKHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKF---GPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAAN  129 (254)
T ss_pred             CCCCCccEEEEEEEeCCEEEEEEecCCCCcHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHH
Confidence            47999999999998766555555555544443333222   3488999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                +.|||.+.........  .....++..|+||
T Consensus       130 i~i~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~y~~p  168 (254)
T cd06627         130 ILTTKDGVVKLADFGVATKLNDVSKD--DASVVGTPYWMAP  168 (254)
T ss_pred             EEECCCCCEEEeccccceecCCCccc--ccccccchhhcCH
Confidence                      3788877655443221  1223456667765

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.47  E-value=1.1e-13  Score=81.59  Aligned_cols=104  Identities=21%  Similarity=0.231  Sum_probs=67.5

Q ss_pred             CCccceeeeeeeeeCCc-----cchhhhhhhhhhcccCcCCCC--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeec
Q 047898            2 KHENLVELLGYCVEGNL-----RDELIWIIHVITCKKGVQGAQ--PSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQR   74 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~   74 (111)
                      +|+||+++++++.....     ...+++++.. .+........  ....+++.++..++.|++.|+.|+|+.   +++|+
T Consensus        59 ~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~  134 (295)
T cd07837          59 ESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHR  134 (295)
T ss_pred             CCCCccceeeeEeecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---Ceeec
Confidence            46999999999886543     2334444442 2222221111  123478999999999999999999999   99999


Q ss_pred             CCCCCCc-----------CCCcccccCCCCcccccccccCccccccCC
Q 047898           75 DIRSSNI-----------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        75 ~l~~~ni-----------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |++++||           .|||.++........  .....+++.|+||
T Consensus       135 dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~aP  180 (295)
T cd07837         135 DLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKS--YTHEIVTLWYRAP  180 (295)
T ss_pred             CCChHHEEEecCCCeEEEeecccceecCCCccc--cCCcccccCCCCh
Confidence            9999993           688877644322111  1122345667766

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.46  E-value=5.6e-14  Score=84.46  Aligned_cols=106  Identities=25%  Similarity=0.375  Sum_probs=68.9

Q ss_pred             CCCccceeeeeeeeeCCcc--chhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 047898            1 LKHENLVELLGYCVEGNLR--DELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRS   78 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~   78 (111)
                      ++|+||+++++++......  ..++.+++... ...... .....+++..+..++.|++.|+.++|+.   +++|+|+++
T Consensus        60 l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~-~~~~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp  134 (336)
T cd07849          60 FKHENIIGILDIIRPPSFESFNDVYIVQELME-TDLYKL-IKTQHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKP  134 (336)
T ss_pred             CCCCCcCchhheeecccccccceEEEEehhcc-cCHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCH
Confidence            5799999999987754321  11222222211 111111 1223388899999999999999999999   999999999


Q ss_pred             CC----------cCCCcccccCCCCccccc-ccccCccccccCC
Q 047898           79 SN----------IADFNLSNQAPNMAARLH-STRVLGTFSYHAP  111 (111)
Q Consensus        79 ~n----------i~~~g~~~~~~~~~~~~~-~~~~~~~~~~~aP  111 (111)
                      +|          ++|||++........... .....++..|+||
T Consensus       135 ~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aP  178 (336)
T cd07849         135 SNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAP  178 (336)
T ss_pred             HHEEECCCCCEEECcccceeeccccccccCCcCCcCcCCCccCh
Confidence            99          478998765543222111 1234567888887

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.46  E-value=3.4e-14  Score=85.29  Aligned_cols=104  Identities=22%  Similarity=0.344  Sum_probs=70.2

Q ss_pred             CCCccceeeeeeeeeCCc----cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCC
Q 047898            1 LKHENLVELLGYCVEGNL----RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDI   76 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l   76 (111)
                      ++||||+++.+++.....    ..++++++. +.+...+.   ....+++..+..++.|++.|+.|+|+.   +++|+|+
T Consensus        61 l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dl  133 (334)
T cd07855          61 FKHDNIIAIRDILRPPGADFKDVYVVMDLME-SDLHHIIH---SDQPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDL  133 (334)
T ss_pred             cCCCCccCHHHhccccCCCCceEEEEEehhh-hhHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCC
Confidence            579999999998864331    223334432 23322222   223388999999999999999999999   9999999


Q ss_pred             CCCC----------cCCCcccccCCCCcccc--cccccCccccccCC
Q 047898           77 RSSN----------IADFNLSNQAPNMAARL--HSTRVLGTFSYHAP  111 (111)
Q Consensus        77 ~~~n----------i~~~g~~~~~~~~~~~~--~~~~~~~~~~~~aP  111 (111)
                      +++|          ++|||.+..........  ......++..|+||
T Consensus       134 kp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~P  180 (334)
T cd07855         134 KPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAP  180 (334)
T ss_pred             CHHHEEEcCCCcEEecccccceeecccCcCCCcccccccccccccCh
Confidence            9999          48999886554322110  11234567778776

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.46  E-value=1.2e-13  Score=82.99  Aligned_cols=84  Identities=32%  Similarity=0.437  Sum_probs=63.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++...+....+.+++. +.+...+.   ....++......++.|++.|+.++|+.   +++|+|++++|
T Consensus        77 l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~---~~~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~n  149 (335)
T PTZ00024         77 IKHENIMGLVDVYVEGDFINLVMDIMA-SDLKKVVD---RKIRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPAN  149 (335)
T ss_pred             CCCcceeeeeEEEecCCcEEEEEeccc-cCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHH
Confidence            579999999999987665555555543 23322222   223378889999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCC
Q 047898           81 ----------IADFNLSNQAP   91 (111)
Q Consensus        81 ----------i~~~g~~~~~~   91 (111)
                                ++|||.+....
T Consensus       150 ill~~~~~~kl~dfg~~~~~~  170 (335)
T PTZ00024        150 IFINSKGICKIADFGLARRYG  170 (335)
T ss_pred             eEECCCCCEEECCccceeecc
Confidence                      37888876543

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.46  E-value=2.2e-14  Score=83.17  Aligned_cols=85  Identities=21%  Similarity=0.208  Sum_probs=65.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++.+.+..+.....+++++..+.+...+...   ..++......++.|++.|+.++|+.   +++|+|++++|
T Consensus        50 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~n  123 (265)
T cd05579          50 AQSPYVVKLYYSFQGKKNLYLVMEYLPGGDLASLLENV---GSLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDN  123 (265)
T ss_pred             CCCcchhHHHHheecCcEEEEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHH
Confidence            47999999999988766565666666544443333222   2478889999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCC
Q 047898           81 ----------IADFNLSNQAP   91 (111)
Q Consensus        81 ----------i~~~g~~~~~~   91 (111)
                                +.|||++....
T Consensus       124 il~~~~~~~~l~dfg~~~~~~  144 (265)
T cd05579         124 ILIDSNGHLKLTDFGLSKVGL  144 (265)
T ss_pred             eEEcCCCCEEEEecccchhcc
Confidence                      37888766443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.46  E-value=1e-13  Score=82.42  Aligned_cols=99  Identities=22%  Similarity=0.335  Sum_probs=69.3

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+|++++.+++........+++++. +.+.......  ...++..++..++.+++.|+.|+|+.   +++|+|++++|
T Consensus        72 l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~--~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~n  145 (308)
T cd06634          72 LRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGN  145 (308)
T ss_pred             CCCCCcccEEEEEEcCCeeEEEEEccC-CCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHh
Confidence            579999999999988665555555543 2222222111  22378888999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+......      ....++..|+||
T Consensus       146 il~~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aP  180 (308)
T cd06634         146 ILLSEPGLVKLGDFGSASIMAPA------NXFVGTPYWMAP  180 (308)
T ss_pred             EEECCCCcEEECCcccceeecCc------ccccCCccccCH
Confidence                      3788876544322      123456667765

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.46  E-value=2e-13  Score=81.40  Aligned_cols=99  Identities=27%  Similarity=0.381  Sum_probs=69.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+|++++.+++.+......+++++. +.+...+..  ....+++.++..++.|++.++.|+|+.   +++|+|++++|
T Consensus        78 l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~--~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~n  151 (313)
T cd06633          78 LKHPNTIEYKGCYLKEHTAWLVMEYCL-GSASDLLEV--HKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGN  151 (313)
T ss_pred             CCCCCCccEEEEEEeCCEEEEEEecCC-CCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhh
Confidence            579999999999998766555555543 222222211  122378889999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+.....      .....++..|+||
T Consensus       152 ili~~~~~~kL~dfg~~~~~~~------~~~~~~~~~y~aP  186 (313)
T cd06633         152 ILLTEPGQVKLADFGSASKSSP------ANSFVGTPYWMAP  186 (313)
T ss_pred             EEECCCCCEEEeecCCCcccCC------CCCccccccccCh
Confidence                      378887643221      1223566677776

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.46  E-value=1.4e-13  Score=81.40  Aligned_cols=104  Identities=24%  Similarity=0.287  Sum_probs=68.3

Q ss_pred             CCCccceeeeeeeeeCC----------ccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC
Q 047898            1 LKHENLVELLGYCVEGN----------LRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPS   70 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~   70 (111)
                      ++||||+++++++....          ....+.+++.. .+...+..  ....+++.++..++.|++.|+.|||+.   +
T Consensus        63 l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~---~  136 (302)
T cd07864          63 LNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLES--GLVHFSEDHIKSFMKQLLEGLNYCHKK---N  136 (302)
T ss_pred             CCCCCeeeeeheecCcchhhhccccCCcEEEEEcccCc-cHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---C
Confidence            57999999999987644          12233344332 22222221  122488999999999999999999999   9


Q ss_pred             eeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           71 IIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        71 i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      ++|+|+++.|          ++|||.+......... ......++..|+||
T Consensus       137 i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~y~~P  186 (302)
T cd07864         137 FLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESR-PYTNKVITLWYRPP  186 (302)
T ss_pred             eecCCCCHHHEEECCCCcEEeCcccccccccCCccc-ccccceeccCccCh
Confidence            9999999999          4789887755433211 01112345566665

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>PTZ00284 protein kinase; Provisional

Probab=99.45  E-value=1.5e-13  Score=85.90  Aligned_cols=74  Identities=12%  Similarity=0.132  Sum_probs=49.1

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeecCCCCCC
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHE-KVQPSIIQRDIRSSN   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~-~~~~~i~h~~l~~~n   80 (111)
                      +|.+++.+.+++........++.....+.+...+.   ....+++.++..++.|++.|+.|||+ .   +++||||||+|
T Consensus       189 ~~~~i~~i~~~~~~~~~~~~iv~~~~g~~l~~~l~---~~~~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~N  262 (467)
T PTZ00284        189 DRFPLMKIQRYFQNETGHMCIVMPKYGPCLLDWIM---KHGPFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPEN  262 (467)
T ss_pred             cCcceeeeEEEEEcCCceEEEEEeccCCCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHH
Confidence            35568888888876442222211111111222221   22348889999999999999999997 6   99999999999


Q ss_pred             c
Q 047898           81 I   81 (111)
Q Consensus        81 i   81 (111)
                      |
T Consensus       263 I  263 (467)
T PTZ00284        263 I  263 (467)
T ss_pred             E
Confidence            4

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.45  E-value=5e-14  Score=82.63  Aligned_cols=101  Identities=23%  Similarity=0.278  Sum_probs=72.0

Q ss_pred             CccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC--
Q 047898            3 HENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN--   80 (111)
Q Consensus         3 h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n--   80 (111)
                      |+|++++++++...+....+.+++ .+.+...+.... ...+++.++..++.|++.++.|+|++   +++|+|+++.|  
T Consensus        57 h~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~  131 (283)
T cd07830          57 HPNIVKLKEVFRENDELYFVFEYM-EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLL  131 (283)
T ss_pred             CCCchhHHHHhhcCCcEEEEEecC-CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEE
Confidence            999999999998866555555555 333333332222 12478999999999999999999999   99999999999  


Q ss_pred             --------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 --------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 --------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                              ++|||.+........   .....++..|+||
T Consensus       132 i~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~aP  167 (283)
T cd07830         132 VSGPEVVKIADFGLAREIRSRPP---YTDYVSTRWYRAP  167 (283)
T ss_pred             EcCCCCEEEeecccceeccCCCC---cCCCCCcccccCc
Confidence                    378888765543222   1223456667776

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.45  E-value=7.7e-14  Score=81.22  Aligned_cols=105  Identities=23%  Similarity=0.346  Sum_probs=70.5

Q ss_pred             CCCccceeeeeeeeeCCc--cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 047898            1 LKHENLVELLGYCVEGNL--RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRS   78 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~   78 (111)
                      ++|+||+++.+++.+...  ...++++...+.+.....   ....++......++.|++.|+.++|++   +++|+|+++
T Consensus        61 l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~---~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p  134 (264)
T cd06653          61 LRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLK---AYGALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKG  134 (264)
T ss_pred             cCCCCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCH
Confidence            579999999999876432  223334444333332222   122377888899999999999999999   999999999


Q ss_pred             CC----------cCCCcccccCCCCcc-cccccccCccccccCC
Q 047898           79 SN----------IADFNLSNQAPNMAA-RLHSTRVLGTFSYHAP  111 (111)
Q Consensus        79 ~n----------i~~~g~~~~~~~~~~-~~~~~~~~~~~~~~aP  111 (111)
                      +|          +.|||+++....... ........++..|+||
T Consensus       135 ~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aP  178 (264)
T cd06653         135 ANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSP  178 (264)
T ss_pred             HHEEEcCCCCEEECccccccccccccccCccccccCCcccccCH
Confidence            99          479998875532111 1011234567778876

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.45  E-value=8e-14  Score=83.78  Aligned_cols=102  Identities=25%  Similarity=0.390  Sum_probs=69.5

Q ss_pred             CCccceeeeeeeeeCCc--cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 047898            2 KHENLVELLGYCVEGNL--RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSS   79 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~   79 (111)
                      +|+||++++++|...+.  ...+++++. +.+.....   .. .+++.....++.|++.|+.++|+.   +++|+|++++
T Consensus        65 ~h~ni~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~---~~-~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~  136 (337)
T cd07852          65 DHPNIVKLLNVIKAENDKDIYLVFEYME-TDLHAVIR---AN-ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPS  136 (337)
T ss_pred             CCCCccceeeeeccCCCceEEEEecccc-cCHHHHHh---cC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHH
Confidence            89999999999875332  233444443 22222111   11 477888888999999999999999   9999999999


Q ss_pred             C----------cCCCcccccCCCCccc---ccccccCccccccCC
Q 047898           80 N----------IADFNLSNQAPNMAAR---LHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n----------i~~~g~~~~~~~~~~~---~~~~~~~~~~~~~aP  111 (111)
                      |          +.|||.+.........   .......++..|+||
T Consensus       137 nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aP  181 (337)
T cd07852         137 NILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAP  181 (337)
T ss_pred             HEEEcCCCcEEEeeccchhccccccccccCcchhcccccccccCc
Confidence            9          4789988755433211   112234577788887

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.44  E-value=1.3e-14  Score=88.10  Aligned_cols=101  Identities=24%  Similarity=0.205  Sum_probs=74.3

Q ss_pred             CccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC--
Q 047898            3 HENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN--   80 (111)
Q Consensus         3 h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n--   80 (111)
                      -|.++++..+|++-+...++.+|+..   ++++.....-..+.++.+.+|+..|+.|+-+||++   +|+.||++..|  
T Consensus       409 ppFL~qlHScFQTmDRLyFVMEyvnG---GDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvm  482 (683)
T KOG0696|consen  409 PPFLVQLHSCFQTMDRLYFVMEYVNG---GDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVM  482 (683)
T ss_pred             CchHHHHHHHhhhhhheeeEEEEecC---chhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceE
Confidence            46788888888885555444444444   44433332233377888999999999999999999   99999999999  


Q ss_pred             --------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 --------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 --------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                              |.|||.++.-.-...  .+.+++||+-|+||
T Consensus       483 Ld~eGHiKi~DFGmcKEni~~~~--TTkTFCGTPdYiAP  519 (683)
T KOG0696|consen  483 LDSEGHIKIADFGMCKENIFDGV--TTKTFCGTPDYIAP  519 (683)
T ss_pred             eccCCceEeeecccccccccCCc--ceeeecCCCccccc
Confidence                    589999874332222  25678999999998

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.44  E-value=7e-14  Score=84.08  Aligned_cols=102  Identities=25%  Similarity=0.346  Sum_probs=69.1

Q ss_pred             CCCccceeeeeeeeeCCc-----cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecC
Q 047898            1 LKHENLVELLGYCVEGNL-----RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRD   75 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~   75 (111)
                      ++|+||+++.+++.....     ..++++++. +.+....   .....++...+..++.|++.|+.|+|+.   +++|+|
T Consensus        61 l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~---~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~d  133 (337)
T cd07858          61 LDHENVIAIKDIMPPPHREAFNDVYIVYELMD-TDLHQII---RSSQTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRD  133 (337)
T ss_pred             cCCCCccchHHheecccccccCcEEEEEeCCC-CCHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCC
Confidence            479999999998875432     122333332 2222121   1223488999999999999999999999   999999


Q ss_pred             CCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           76 IRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        76 l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      ++++|          ++|||.+.........  .....++..|+||
T Consensus       134 lkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~--~~~~~~~~~y~aP  177 (337)
T cd07858         134 LKPSNLLLNANCDLKICDFGLARTTSEKGDF--MTEYVVTRWYRAP  177 (337)
T ss_pred             CCHHHEEEcCCCCEEECcCccccccCCCccc--ccccccccCccCh
Confidence            99999          3789988755433211  2234567778876

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.43  E-value=3.9e-13  Score=78.93  Aligned_cols=103  Identities=30%  Similarity=0.415  Sum_probs=68.5

Q ss_pred             CCCccceeeeeeeeeCCc-----cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecC
Q 047898            1 LKHENLVELLGYCVEGNL-----RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRD   75 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~   75 (111)
                      ++|+|++++.+++...+.     ...+++++. +.+...+.. .....+++.++..++.|++.|+.++|+.   +++|+|
T Consensus        58 ~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~-~~l~~~l~~-~~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~  132 (287)
T cd07838          58 FEHPNIVRLLDVCHGPRTDRELKLTLVFEHVD-QDLATYLSK-CPKPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRD  132 (287)
T ss_pred             cCCCCcceEEEEEeeccCCCCceeEEEehhcc-cCHHHHHHH-ccCCCCCHHHHHHHHHHHHHHHHHHHHC---Ceeecc
Confidence            369999999999987654     222323322 122222211 1122488999999999999999999999   999999


Q ss_pred             CCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           76 IRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        76 l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      ++++|          ++|||.+........   .....++..|+||
T Consensus       133 l~~~nili~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~~~P  175 (287)
T cd07838         133 LKPQNILVTSDGQVKIADFGLARIYSFEMA---LTSVVVTLWYRAP  175 (287)
T ss_pred             CChhhEEEccCCCEEEeccCcceeccCCcc---cccccccccccCh
Confidence            99999          478888765433221   1222356667766

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.43  E-value=1.6e-13  Score=79.29  Aligned_cols=106  Identities=21%  Similarity=0.281  Sum_probs=74.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCC-CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQ-PSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~   79 (111)
                      ++|+|++++.+.+........+.+++..+.+...+.... ....++..+...++.+++.|+.++|+.   +++|+|+++.
T Consensus        56 l~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~  132 (258)
T cd08215          56 LNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQ  132 (258)
T ss_pred             cCCCChhheEEEEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChH
Confidence            479999999999988765555555555444433333221 124488999999999999999999999   9999999999


Q ss_pred             C----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           80 N----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |          ++|||.+.........  .....++..|+||
T Consensus       133 nil~~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~y~~p  172 (258)
T cd08215         133 NIFLTSNGLVKLGDFGISKVLSSTVDL--AKTVVGTPYYLSP  172 (258)
T ss_pred             HeEEcCCCcEEECCccceeecccCcce--ecceeeeecccCh
Confidence            9          3788877655433211  2233566677776

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.42  E-value=1.7e-13  Score=79.43  Aligned_cols=106  Identities=20%  Similarity=0.241  Sum_probs=71.7

Q ss_pred             CCCccceeeeeeeeeCCc--cchhhhhhhhhhcccCcCCC-CCCCCCCHHHHHHHHHHHHHHHHHhh-----hcCCCCee
Q 047898            1 LKHENLVELLGYCVEGNL--RDELIWIIHVITCKKGVQGA-QPSPVLDWMTRVRIVVDALRGLEYLH-----EKVQPSII   72 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~i~~~l~~lh-----~~~~~~i~   72 (111)
                      ++|+||+++++++.....  ...+++++..+++...+... .....+++.+...++.+++.|+.++|     +.   +++
T Consensus        56 l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~  132 (265)
T cd08217          56 LKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVL  132 (265)
T ss_pred             cCCCccceeeeeeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cce
Confidence            579999999998865332  23344555444443333221 12234888999999999999999999     77   999


Q ss_pred             ecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           73 QRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        73 h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |+|++++|          +.|||.+.........  .....++..|+||
T Consensus       133 h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~--~~~~~~~~~~~~p  179 (265)
T cd08217         133 HRDLKPANIFLDANNNVKLGDFGLAKILGHDSSF--AKTYVGTPYYMSP  179 (265)
T ss_pred             ecCCCHHHEEEecCCCEEEecccccccccCCccc--ccccccCCCccCh
Confidence            99999999          3788887765443321  1233567777776

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.42  E-value=1.3e-13  Score=81.11  Aligned_cols=103  Identities=20%  Similarity=0.180  Sum_probs=72.6

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +|+||+.+.+.+..+.....+++++..+.+...+..   ...+++..+..++.|++.++.++|+.   +++|+|+++.| 
T Consensus        63 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~ni  136 (288)
T cd05583          63 RCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQ---REHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENI  136 (288)
T ss_pred             CCcchhhhheeeecCCEEEEEEecCCCCcHHHHHhh---cCCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHe
Confidence            589999999999876655555566554444333322   23378888899999999999999999   99999999999 


Q ss_pred             ---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                               ++|||.++........ ......++..|+||
T Consensus       137 l~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aP  175 (288)
T cd05583         137 LLDSEGHVVLTDFGLSKEFLAEEEE-RAYSFCGTIEYMAP  175 (288)
T ss_pred             EECCCCCEEEEECcccccccccccc-ccccccCCccccCH
Confidence                     3788887654433211 11223466677776

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.41  E-value=3.3e-13  Score=81.50  Aligned_cols=99  Identities=30%  Similarity=0.442  Sum_probs=65.7

Q ss_pred             CCCccceeeeeeeeeCCcc---chhhhhhh--hhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecC
Q 047898            1 LKHENLVELLGYCVEGNLR---DELIWIIH--VITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRD   75 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~   75 (111)
                      ++|+||+++.+++......   ..++.+.+  .+.+....    ....+++..+..++.|++.|+.|+|+.   +++|+|
T Consensus        73 l~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~~~~L~~~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~d  145 (345)
T cd07877          73 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRD  145 (345)
T ss_pred             cCCCcccceeeeeeecccccccccEEEEehhcccCHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecC
Confidence            5899999999988753321   11111111  11111111    112378899999999999999999999   999999


Q ss_pred             CCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           76 IRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        76 l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      ++++|          ++|||+++.....     .....++..|+||
T Consensus       146 lkp~NIll~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aP  186 (345)
T cd07877         146 LKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP  186 (345)
T ss_pred             CChHHEEEcCCCCEEEeccccccccccc-----ccccccCCCccCH
Confidence            99999          4788887654221     1233566777776

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.41  E-value=4.7e-13  Score=78.54  Aligned_cols=104  Identities=24%  Similarity=0.303  Sum_probs=71.9

Q ss_pred             CCCccceeeeeeeeeC--CccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 047898            1 LKHENLVELLGYCVEG--NLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRS   78 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~   78 (111)
                      ++|+|++++.+++...  +....+++++.. .+.......  ...+++.++..++.|++.|+.++|+.   +++|+|+++
T Consensus        55 l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~--~~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p  128 (287)
T cd07840          55 LRHPNIVRLKEIVTSKGKGSIYMVFEYMDH-DLTGLLDSP--EVKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKG  128 (287)
T ss_pred             ccCCCeeeheeeEecCCCCcEEEEeccccc-cHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcH
Confidence            4799999999999876  444455555542 222222221  13488999999999999999999999   999999999


Q ss_pred             CC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           79 SN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        79 ~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +|          ++|||.+......... ......++..|+||
T Consensus       129 ~nil~~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~y~~P  170 (287)
T cd07840         129 SNILINNDGVLKLADFGLARPYTKRNSA-DYTNRVITLWYRPP  170 (287)
T ss_pred             HHeEEcCCCCEEEccccceeeccCCCcc-cccccccccccCCc
Confidence            99          4788887755443211 01223446667776

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.41  E-value=2.2e-13  Score=82.40  Aligned_cols=99  Identities=27%  Similarity=0.344  Sum_probs=67.3

Q ss_pred             CCCccceeeeeeeeeCCcc------chhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeec
Q 047898            1 LKHENLVELLGYCVEGNLR------DELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQR   74 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~   74 (111)
                      ++|+||++++++|......      ..+++++.. .+...+   ..  .++..++..++.|++.|+.++|+.   +++|+
T Consensus        72 l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~---~~--~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~  142 (353)
T cd07850          72 VNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVI---QM--DLDHERMSYLLYQMLCGIKHLHSA---GIIHR  142 (353)
T ss_pred             cCCCCCcceeeeeccCCCccccCcEEEEEeccCC-CHHHHH---hh--cCCHHHHHHHHHHHHHHHHHHHhC---CeeeC
Confidence            5799999999998754321      222233221 111111   11  178888899999999999999999   99999


Q ss_pred             CCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           75 DIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        75 ~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |++|+|          ++|||.++.......   .....++..|+||
T Consensus       143 dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~---~~~~~~~~~y~aP  186 (353)
T cd07850         143 DLKPSNIVVKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYYRAP  186 (353)
T ss_pred             CCCHHHEEECCCCCEEEccCccceeCCCCCC---CCCCcccccccCH
Confidence            999999          489998876543221   2234567778877

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.41  E-value=2.1e-13  Score=80.28  Aligned_cols=104  Identities=27%  Similarity=0.324  Sum_probs=68.4

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhh--hhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHV--ITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSS   79 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~   79 (111)
                      +|+||+++++++...+....+.+++..  ......... .....+++..+..++.+++.|+.|+|+..  +++|+|++++
T Consensus        61 ~~~~iv~~~~~~~~~~~~~~~~e~~~~~l~~l~~~~~~-~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~  137 (288)
T cd06616          61 DCPYIVKFYGALFREGDCWICMELMDISLDKFYKYVYE-VLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPS  137 (288)
T ss_pred             CCCCEeeeeeEEecCCcEEEEEecccCCHHHHHHHHHH-hhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHH
Confidence            499999999998876655444444331  111111111 11234888999999999999999999632  8999999999


Q ss_pred             C----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           80 N----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |          ++|||+++.......   .....++..|+||
T Consensus       138 Nil~~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aP  176 (288)
T cd06616         138 NILLDRNGNIKLCDFGISGQLVDSIA---KTRDAGCRPYMAP  176 (288)
T ss_pred             HEEEccCCcEEEeecchhHHhccCCc---cccccCccCccCH
Confidence            9          378988765443221   1223466677776

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.41  E-value=2e-13  Score=80.42  Aligned_cols=104  Identities=26%  Similarity=0.308  Sum_probs=68.9

Q ss_pred             CCCccceeeeeeeeeCCc--cchhhhhhhhhhcccCcCCC-CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCC
Q 047898            1 LKHENLVELLGYCVEGNL--RDELIWIIHVITCKKGVQGA-QPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIR   77 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~   77 (111)
                      ++||||++++++|.....  ...+++++..+.+...+... .....++......++.+++.|+.|+|+.   +++|+|++
T Consensus        56 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~  132 (287)
T cd06621          56 CKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIK  132 (287)
T ss_pred             CCCCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCC
Confidence            589999999999875432  23344555444333222111 1223378888899999999999999999   99999999


Q ss_pred             CCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           78 SSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        78 ~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +.|          +.|||.+........    ....++..|+||
T Consensus       133 ~~nil~~~~~~~~l~dfg~~~~~~~~~~----~~~~~~~~y~~p  172 (287)
T cd06621         133 PSNILLTRKGQVKLCDFGVSGELVNSLA----GTFTGTSFYMAP  172 (287)
T ss_pred             HHHEEEecCCeEEEeecccccccccccc----ccccCCccccCH
Confidence            999          478888764432211    122345566665

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.41  E-value=1.6e-13  Score=80.37  Aligned_cols=103  Identities=29%  Similarity=0.323  Sum_probs=71.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+|++++.+++...+....+++++. +.+...+....  ..++..++..++.+++.|+.++|+.   +++|+|++++|
T Consensus        55 ~~~~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~n  128 (282)
T cd07829          55 LKHPNIVKLLDVIHTERKLYLVFEYCD-MDLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQN  128 (282)
T ss_pred             cCCCCHHHHHhhhhcCCceEEEecCcC-cCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhe
Confidence            479999999999988765555555554 23333322211  3488999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+.........  ......+..|+||
T Consensus       129 i~~~~~~~~~l~d~g~~~~~~~~~~~--~~~~~~~~~~~aP  167 (282)
T cd07829         129 ILINRDGVLKLADFGLARAFGIPLRT--YTHEVVTLWYRAP  167 (282)
T ss_pred             EEEcCCCCEEEecCCcccccCCCccc--cCccccCcCcCCh
Confidence                      3788887655433211  1223345567766

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.41  E-value=2.2e-13  Score=82.15  Aligned_cols=99  Identities=30%  Similarity=0.413  Sum_probs=66.1

Q ss_pred             CCCccceeeeeeeeeCCccc---hhhhhhhh--hhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecC
Q 047898            1 LKHENLVELLGYCVEGNLRD---ELIWIIHV--ITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRD   75 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~   75 (111)
                      ++|+||+++.+++.......   ..+.+++.  ..+....    ....+++..+..++.|++.|+.|+|+.   +++|+|
T Consensus        71 l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~----~~~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~d  143 (343)
T cd07880          71 MKHENVIGLLDVFTPDLSLDRFHDFYLVMPFMGTDLGKLM----KHEKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRD  143 (343)
T ss_pred             cCCCCccceeeeecCCccccccceEEEEEecCCCCHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCC
Confidence            57999999999987644221   11112221  1111111    123488999999999999999999999   999999


Q ss_pred             CCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           76 IRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        76 l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      ++|+|          +.|||.+.......     ....++..|+||
T Consensus       144 lkp~Nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aP  184 (343)
T cd07880         144 LKPGNLAVNEDCELKILDFGLARQTDSEM-----TGYVVTRWYRAP  184 (343)
T ss_pred             CCHHHEEEcCCCCEEEeecccccccccCc-----cccccCCcccCH
Confidence            99999          37899876543221     223456667766

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.40  E-value=6.3e-14  Score=81.47  Aligned_cols=102  Identities=30%  Similarity=0.368  Sum_probs=72.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHE-KVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~-~~~~~i~h~~l~~~   79 (111)
                      ++||||+++++++........+.+++....+...+....  ..++......++.|++.++.++|+ .   +++|+|++++
T Consensus        56 ~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~  130 (265)
T cd06605          56 CNSPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPS  130 (265)
T ss_pred             CCCCchhhhheeeecCCEEEEEEEecCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHH
Confidence            479999999999988765555556655444444333221  347888899999999999999999 8   9999999999


Q ss_pred             C----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           80 N----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |          +.|||.+........    ....++..|+||
T Consensus       131 ni~~~~~~~~~l~d~g~~~~~~~~~~----~~~~~~~~y~~P  168 (265)
T cd06605         131 NILVNSRGQIKLCDFGVSGQLVNSLA----KTFVGTSSYMAP  168 (265)
T ss_pred             HEEECCCCCEEEeecccchhhHHHHh----hcccCChhccCH
Confidence            9          378887654432211    114566667766

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.40  E-value=1.1e-13  Score=80.86  Aligned_cols=84  Identities=23%  Similarity=0.220  Sum_probs=65.8

Q ss_pred             CccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC--
Q 047898            3 HENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN--   80 (111)
Q Consensus         3 h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n--   80 (111)
                      |+||+++++++...+...++.+++..+++...+..   ...+++.....++.|++.|+.++|+.   +++|+|++++|  
T Consensus        61 ~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~  134 (280)
T cd05581          61 HPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRK---YGSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENIL  134 (280)
T ss_pred             CCCchhHHHHhcCCceEEEEEcCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeE
Confidence            99999999999887666556566555544444332   22489999999999999999999999   99999999999  


Q ss_pred             --------cCCCcccccCCC
Q 047898           81 --------IADFNLSNQAPN   92 (111)
Q Consensus        81 --------i~~~g~~~~~~~   92 (111)
                              ++|||.+.....
T Consensus       135 i~~~~~~~l~df~~~~~~~~  154 (280)
T cd05581         135 LDKDMHIKITDFGTAKVLDP  154 (280)
T ss_pred             ECCCCCEEecCCccccccCC
Confidence                    378888765543

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.40  E-value=2.1e-13  Score=78.67  Aligned_cols=103  Identities=21%  Similarity=0.224  Sum_probs=72.1

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++.+..+.....+++++..+.+...+..   ...+++.....++.|++.|+.++|+.   +++|+|+++.|
T Consensus        50 l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~n  123 (250)
T cd05123          50 INHPFIVKLHYAFQTEEKLYLVLEYAPGGELFSHLSK---EGRFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPEN  123 (250)
T ss_pred             cCCCcHHHHHHHeecCCeeEEEEecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcce
Confidence            4799999999999876655555555544444333322   22478899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+.........  .....++..|++|
T Consensus       124 i~~~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~~~~P  162 (250)
T cd05123         124 ILLDADGHIKLTDFGLAKELSSEGSR--TNTFCGTPEYLAP  162 (250)
T ss_pred             EEEcCCCcEEEeecCcceecccCCCc--ccCCcCCccccCh
Confidence                      3678877654433211  2223455666665

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.40  E-value=3e-13  Score=89.10  Aligned_cols=74  Identities=20%  Similarity=0.373  Sum_probs=50.0

Q ss_pred             CC-ccceeeeeeeeeCCc---c-chhhhhhh--hhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeec
Q 047898            2 KH-ENLVELLGYCVEGNL---R-DELIWIIH--VITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQR   74 (111)
Q Consensus         2 ~h-~~iv~l~~~~~~~~~---~-~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~   74 (111)
                      +| +||..++++|..+..   . ..++..++  ..++...+..  ....++..++..++.|++.|+.|+|++   +|+||
T Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~~---gIvHr  104 (793)
T PLN00181         30 SHIDYVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDN--PDRSVDAFECFHVFRQIVEIVNAAHSQ---GIVVH  104 (793)
T ss_pred             hHHHHHHHhhcccCCccccccccchhhhhhccCCccHHHHHhc--ccccccHHHHHHHHHHHHHHHHHHHhC---Ceeec
Confidence            45 688888888732220   1 11222222  2333333322  223488999999999999999999999   99999


Q ss_pred             CCCCCC
Q 047898           75 DIRSSN   80 (111)
Q Consensus        75 ~l~~~n   80 (111)
                      ||||+|
T Consensus       105 DlKP~N  110 (793)
T PLN00181        105 NVRPSC  110 (793)
T ss_pred             cCCchh
Confidence            999999

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.40  E-value=1.6e-13  Score=80.40  Aligned_cols=103  Identities=23%  Similarity=0.280  Sum_probs=72.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++..+.....+++++.. .+...+...  ...+++.++..++.+++.|+.++|+.   +++|+|++++|
T Consensus        55 l~~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~n  128 (283)
T cd05118          55 LNHPNIIKLLDVFRHKGDLYLVFEFMDT-DLYKLIKDR--QRGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPEN  128 (283)
T ss_pred             hcCCCcchHHHhhccCCCEEEEEeccCC-CHHHHHHhh--cccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHH
Confidence            4799999999999887655555555542 222222221  13478899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+.........  .....++..|+||
T Consensus       129 ili~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~~~~P  167 (283)
T cd05118         129 LLINTEGVLKLADFGLARSFGSPVRP--YTHYVVTRWYRAP  167 (283)
T ss_pred             EEECCCCcEEEeeeeeeEecCCCccc--ccCccCcccccCc
Confidence                      3788877655443211  1223455667766

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.39  E-value=3.2e-13  Score=79.84  Aligned_cols=101  Identities=24%  Similarity=0.360  Sum_probs=68.7

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeecCCCCCC
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHE-KVQPSIIQRDIRSSN   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~-~~~~~i~h~~l~~~n   80 (111)
                      +|+||+++++++........+++++.. .+.......  ...+++.++..++.+++.|+.|+|+ .   +++|+|++++|
T Consensus        72 ~~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~---~i~H~dl~p~n  145 (296)
T cd06618          72 DCPYIVKCYGYFITDSDVFICMELMST-CLDKLLKRI--QGPIPEDILGKMTVAIVKALHYLKEKH---GVIHRDVKPSN  145 (296)
T ss_pred             CCCchHhhheeeecCCeEEEEeeccCc-CHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhhC---CEecCCCcHHH
Confidence            589999999999887665555555432 111111111  1247888889999999999999997 6   89999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                +.|||.+.........   ....++..|+||
T Consensus       146 ill~~~~~~kL~dfg~~~~~~~~~~~---~~~~~~~~y~aP  183 (296)
T cd06618         146 ILLDASGNVKLCDFGISGRLVDSKAK---TRSAGCAAYMAP  183 (296)
T ss_pred             EEEcCCCCEEECccccchhccCCCcc---cCCCCCccccCH
Confidence                      4889987654332211   122345566665

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.39  E-value=7.2e-13  Score=76.22  Aligned_cols=103  Identities=29%  Similarity=0.401  Sum_probs=73.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|++++++.+++........+.+++....+........  ..+++..+..++.+++.++.++|+.   +++|+|+++.|
T Consensus        54 l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~n  128 (253)
T cd05122          54 CKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAAN  128 (253)
T ss_pred             CCCCCEeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHH
Confidence            579999999999988766666666665444443333221  3488999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                +.|||.+........   .....++..|++|
T Consensus       129 i~i~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~~P  166 (253)
T cd05122         129 ILLTSDGEVKLIDFGLSAQLSDTKA---RNTMVGTPYWMAP  166 (253)
T ss_pred             EEEccCCeEEEeecccccccccccc---ccceecCCcccCH
Confidence                      378887765543321   1223455666665

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.38  E-value=2.2e-13  Score=85.49  Aligned_cols=85  Identities=16%  Similarity=0.286  Sum_probs=63.4

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCc
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI   81 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~ni   81 (111)
                      +||||+++.+++.++.....+.+.+..+.+.   .+......+. .++..++.+++.++.|||++   +++|||++|+||
T Consensus       374 ~h~niv~~~~v~~~~~~~~~v~e~l~g~ell---~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NI  446 (612)
T KOG0603|consen  374 DHPNIVKSHDVYEDGKEIYLVMELLDGGELL---RRIRSKPEFC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNI  446 (612)
T ss_pred             CCCcceeecceecCCceeeeeehhccccHHH---HHHHhcchhH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhhe
Confidence            6999999999999866555555555544333   2333333233 67778999999999999999   999999999994


Q ss_pred             -----------CCCcccccCCCC
Q 047898           82 -----------ADFNLSNQAPNM   93 (111)
Q Consensus        82 -----------~~~g~~~~~~~~   93 (111)
                                 .|||+++.....
T Consensus       447 L~~~~~g~lrltyFG~a~~~~~~  469 (612)
T KOG0603|consen  447 LLDGSAGHLRLTYFGFWSELERS  469 (612)
T ss_pred             eecCCCCcEEEEEechhhhCchh
Confidence                       678887765544

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.38  E-value=3.4e-13  Score=80.81  Aligned_cols=104  Identities=28%  Similarity=0.340  Sum_probs=69.9

Q ss_pred             CCCccceeeeeeeeeCC-----ccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecC
Q 047898            1 LKHENLVELLGYCVEGN-----LRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRD   75 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~   75 (111)
                      ++|+||+++.+++....     ...++.+++. ..+...+.   ....+++..+..++.+++.|+.++|+.   +++|+|
T Consensus        56 l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~---~~~~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~d  128 (330)
T cd07834          56 LRHENIIGLLDILRPPSPEDFNDVYIVTELME-TDLHKVIK---SPQPLTDDHIQYFLYQILRGLKYLHSA---NVIHRD  128 (330)
T ss_pred             cCCcchhhhhhhhcccCcccccceEEEecchh-hhHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCC
Confidence            47999999999988754     1222333333 22222222   222488999999999999999999999   999999


Q ss_pred             CCCCC----------cCCCcccccCCCCccc-ccccccCccccccCC
Q 047898           76 IRSSN----------IADFNLSNQAPNMAAR-LHSTRVLGTFSYHAP  111 (111)
Q Consensus        76 l~~~n----------i~~~g~~~~~~~~~~~-~~~~~~~~~~~~~aP  111 (111)
                      +++.|          ++|||.+......... .......++..|+||
T Consensus       129 lkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aP  175 (330)
T cd07834         129 LKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAP  175 (330)
T ss_pred             CCHHHEEEcCCCCEEEcccCceEeecccccccccccccccccCcCCc
Confidence            99999          3788887755433210 012234567778776

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.38  E-value=3.5e-13  Score=79.95  Aligned_cols=85  Identities=32%  Similarity=0.429  Sum_probs=59.3

Q ss_pred             CCCccceeeeeeeeeCCcc--------chhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCee
Q 047898            1 LKHENLVELLGYCVEGNLR--------DELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSII   72 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~   72 (111)
                      ++|+||+++++++......        ..+.+++.. .+...+..  ....+++.++..++.|++.|+.|+|+.   +++
T Consensus        64 l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~-~l~~~~~~--~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~  137 (311)
T cd07866          64 LKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDH-DLSGLLEN--PSVKLTESQIKCYMLQLLEGINYLHEN---HIL  137 (311)
T ss_pred             cCCCCccchhhheecccccccccCceEEEEEecCCc-CHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHhC---Cee
Confidence            5899999999987654322        122222221 11111111  223488999999999999999999999   999


Q ss_pred             ecCCCCCC----------cCCCcccccCC
Q 047898           73 QRDIRSSN----------IADFNLSNQAP   91 (111)
Q Consensus        73 h~~l~~~n----------i~~~g~~~~~~   91 (111)
                      |+|+++.|          ++|||.++...
T Consensus       138 H~dl~p~nil~~~~~~~~l~dfg~~~~~~  166 (311)
T cd07866         138 HRDIKAANILIDNQGILKIADFGLARPYD  166 (311)
T ss_pred             cCCCCHHHEEECCCCCEEECcCccchhcc
Confidence            99999999          37888876543

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.38  E-value=6e-13  Score=76.82  Aligned_cols=105  Identities=25%  Similarity=0.320  Sum_probs=72.2

Q ss_pred             CCCccceeeeeeeeeC--CccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 047898            1 LKHENLVELLGYCVEG--NLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRS   78 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~   78 (111)
                      ++|+||+++++.+...  .....+.+++....+.......   ..+++.++..++.+++.++.|+|+.   +++|+|+++
T Consensus        56 l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p  129 (260)
T cd06606          56 LQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKF---GKLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKG  129 (260)
T ss_pred             cCCCCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCH
Confidence            5799999999999876  4444455555444443333222   1488999999999999999999999   999999999


Q ss_pred             CC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           79 SN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        79 ~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      .|          +.|||.+................++..|++|
T Consensus       130 ~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~p  172 (260)
T cd06606         130 ANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAP  172 (260)
T ss_pred             HHEEEcCCCCEEEcccccEEecccccccccccCCCCCccccCH
Confidence            99          3788877655443321001223455666665

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.37  E-value=1.6e-12  Score=78.09  Aligned_cols=98  Identities=27%  Similarity=0.369  Sum_probs=65.3

Q ss_pred             CCCccceeeeeeeeeCCc-cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEGNL-RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~   79 (111)
                      ++||||+++.++|...+. ...+.+++. +.+...+    ....++......++.|++.|+.++|+.   +++|+++++.
T Consensus        66 l~hpniv~~~~~~~~~~~~~~lv~e~~~-~~L~~~~----~~~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~  137 (328)
T cd07856          66 LRHENIISLSDIFISPLEDIYFVTELLG-TDLHRLL----TSRPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPS  137 (328)
T ss_pred             cCCCCeeeEeeeEecCCCcEEEEeehhc-cCHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHH
Confidence            579999999999876432 223333332 2221111    122377778888999999999999999   9999999999


Q ss_pred             C----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           80 N----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |          ++|||.+......     .....++..|+||
T Consensus       138 Nili~~~~~~~l~dfg~~~~~~~~-----~~~~~~~~~y~aP  174 (328)
T cd07856         138 NILINENCDLKICDFGLARIQDPQ-----MTGYVSTRYYRAP  174 (328)
T ss_pred             HEeECCCCCEEeCccccccccCCC-----cCCCcccccccCc
Confidence            9          3788877643221     1223455666665

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.37  E-value=3.6e-13  Score=81.22  Aligned_cols=100  Identities=29%  Similarity=0.418  Sum_probs=64.9

Q ss_pred             CCCccceeeeeeeeeCCccc---hhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCC
Q 047898            1 LKHENLVELLGYCVEGNLRD---ELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIR   77 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~   77 (111)
                      ++|+||+++.+++.......   ..+.+++....  .+.... ...++...+..++.|++.|+.|+|+.   +++|+|++
T Consensus        71 l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~--~l~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlk  144 (342)
T cd07879          71 MQHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQT--DLQKIM-GHPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLK  144 (342)
T ss_pred             cCCCCccchhheecccccCCCCceEEEEeccccc--CHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCC
Confidence            57999999999987543221   11122221111  111111 12378888999999999999999999   99999999


Q ss_pred             CCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           78 SSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        78 ~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      ++|          ++|||+++.....     .....++..|+||
T Consensus       145 p~NIll~~~~~~kL~dfg~~~~~~~~-----~~~~~~~~~y~aP  183 (342)
T cd07879         145 PGNLAVNEDCELKILDFGLARHADAE-----MTGYVVTRWYRAP  183 (342)
T ss_pred             HHHEEECCCCCEEEeeCCCCcCCCCC-----CCCceeeecccCh
Confidence            999          3788887654221     1223456677776

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.36  E-value=6.1e-13  Score=84.54  Aligned_cols=81  Identities=19%  Similarity=0.135  Sum_probs=66.1

Q ss_pred             CccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCc-
Q 047898            3 HENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI-   81 (111)
Q Consensus         3 h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~ni-   81 (111)
                      .+=||+|+-.|++...+.++..|+..++...++.+.   ..|+++.+.+|+..+.+++++.|..   ++|||||||.|| 
T Consensus       688 n~WVVrLyySFQDkdnLYFVMdYIPGGDmMSLLIrm---gIFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNIL  761 (1034)
T KOG0608|consen  688 NEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRM---GIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNIL  761 (1034)
T ss_pred             CcceEEEEEEeccCCceEEEEeccCCccHHHHHHHh---ccCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceE
Confidence            355899999999988777777777766665555433   3389999999999999999999999   999999999994 


Q ss_pred             ---------CCCccccc
Q 047898           82 ---------ADFNLSNQ   89 (111)
Q Consensus        82 ---------~~~g~~~~   89 (111)
                               .|||++..
T Consensus       762 IDrdGHIKLTDFGLCTG  778 (1034)
T KOG0608|consen  762 IDRDGHIKLTDFGLCTG  778 (1034)
T ss_pred             EccCCceeeeecccccc
Confidence                     78888643

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.36  E-value=2.7e-13  Score=89.89  Aligned_cols=99  Identities=18%  Similarity=0.135  Sum_probs=75.1

Q ss_pred             ceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-----
Q 047898            6 LVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-----   80 (111)
Q Consensus         6 iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-----   80 (111)
                      |+++.-.|++......+.+||..|++..++....   .+|.+-+.+|...++.|+.-+|+.   |.+|||+||.|     
T Consensus       137 iv~LhyAFQD~~~LYlVMdY~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~  210 (1317)
T KOG0612|consen  137 IVQLHYAFQDERYLYLVMDYMPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDK  210 (1317)
T ss_pred             HHHHHHHhcCccceEEEEecccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecc
Confidence            5667667777555555555555555544444433   388898999999999999999999   99999999999     


Q ss_pred             -----cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 -----IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 -----i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                           ++|||.+-.+..+. .+.....+|||-|.+|
T Consensus       211 ~GHikLADFGsClkm~~dG-~V~s~~aVGTPDYISP  245 (1317)
T KOG0612|consen  211 SGHIKLADFGSCLKMDADG-TVRSSVAVGTPDYISP  245 (1317)
T ss_pred             cCcEeeccchhHHhcCCCC-cEEeccccCCCCccCH
Confidence                 38999987776543 2335678999999988

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.32  E-value=5.5e-13  Score=77.10  Aligned_cols=104  Identities=26%  Similarity=0.382  Sum_probs=71.1

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCC-CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGA-QPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~   79 (111)
                      ++|+||+++.+++........+++++...++...+... .....+++..+..++.+++.|+.++|+.   +++|+|+++.
T Consensus        56 l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~  132 (256)
T cd08530          56 VNHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSA  132 (256)
T ss_pred             CCCCCchhhhhhhccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcc
Confidence            57999999999998876555555555444333222211 1123378888999999999999999999   9999999999


Q ss_pred             C----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           80 N----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |          +.|||.+.......    .....++..|++|
T Consensus       133 ni~~~~~~~~kl~d~g~~~~~~~~~----~~~~~~~~~~~~P  170 (256)
T cd08530         133 NILLVANDLVKIGDLGISKVLKKNM----AKTQIGTPHYMAP  170 (256)
T ss_pred             eEEEecCCcEEEeeccchhhhccCC----cccccCCccccCH
Confidence            9          37888776544331    1122345556554

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.31  E-value=8.2e-13  Score=79.66  Aligned_cols=103  Identities=21%  Similarity=0.276  Sum_probs=65.8

Q ss_pred             CCCccceeeeeeeeeCCcc--------------chhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhc
Q 047898            1 LKHENLVELLGYCVEGNLR--------------DELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEK   66 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~   66 (111)
                      ++||||+++++++......              ..+.+++. +.+...+    ....++......++.|++.|+.|+|+.
T Consensus        59 l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~----~~~~l~~~~~~~~~~qi~~aL~~LH~~  133 (342)
T cd07854          59 LDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYME-TDLANVL----EQGPLSEEHARLFMYQLLRGLKYIHSA  133 (342)
T ss_pred             cCCCcchhhHhhhcccccccccccccccccceEEEEeeccc-ccHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            5799999999887654321              12223332 1111111    122378899999999999999999999


Q ss_pred             CCCCeeecCCCCCC-----------cCCCcccccCCCCcccc-cccccCccccccCC
Q 047898           67 VQPSIIQRDIRSSN-----------IADFNLSNQAPNMAARL-HSTRVLGTFSYHAP  111 (111)
Q Consensus        67 ~~~~i~h~~l~~~n-----------i~~~g~~~~~~~~~~~~-~~~~~~~~~~~~aP  111 (111)
                         +++|+|++++|           +.|||.++......... ......++..|+||
T Consensus       134 ---givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aP  187 (342)
T cd07854         134 ---NVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSP  187 (342)
T ss_pred             ---CcccCCCCHHHEEEcCCCceEEECCcccceecCCccccccccccccccccccCH
Confidence               99999999999           36788776543221110 01222456677776

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.27  E-value=1.5e-12  Score=78.58  Aligned_cols=98  Identities=30%  Similarity=0.394  Sum_probs=65.6

Q ss_pred             CCCccceeeeeeeeeCCc------cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeec
Q 047898            1 LKHENLVELLGYCVEGNL------RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQR   74 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~   74 (111)
                      ++|+|++++.+++...+.      ...+.+++ ...+....    ....+++.++..++.|++.|+.++|+.   +++|+
T Consensus        71 l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~----~~~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~  142 (343)
T cd07851          71 MDHENVIGLLDVFTPASSLEDFQDVYLVTHLM-GADLNNIV----KCQKLSDDHIQFLVYQILRGLKYIHSA---GIIHR  142 (343)
T ss_pred             ccCCCHHHHHHHhhccccccccccEEEEEecC-CCCHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecC
Confidence            479999999988765443      11222222 11111111    122388899999999999999999999   99999


Q ss_pred             CCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           75 DIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        75 ~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |++++|          ++|||.+......     .....++..|+||
T Consensus       143 dlkp~Nill~~~~~~kL~dfg~~~~~~~~-----~~~~~~~~~y~aP  184 (343)
T cd07851         143 DLKPSNIAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP  184 (343)
T ss_pred             CCCHHHeEECCCCCEEEcccccccccccc-----ccCCcccccccCH
Confidence            999999          4788887654322     1223456667766

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.26  E-value=4.3e-12  Score=72.06  Aligned_cols=84  Identities=18%  Similarity=0.253  Sum_probs=62.8

Q ss_pred             CccceeeeeeeeeCCc--cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            3 HENLVELLGYCVEGNL--RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         3 h~~iv~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      |||||+++++..++..  +.++++++.+.+...+..      .++.-.+..++.+++.|+.|||+.   +|.|||+||.|
T Consensus        92 g~NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly~------tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhN  162 (338)
T KOG0668|consen   92 GPNIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLYP------TLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHN  162 (338)
T ss_pred             CCCeeehhhhhcCccccCchhHhhhhccccHHHHhh------hhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcce
Confidence            8999999999987543  235666666544332221      155556788899999999999999   99999999999


Q ss_pred             -----------cCCCcccccCCCCcc
Q 047898           81 -----------IADFNLSNQAPNMAA   95 (111)
Q Consensus        81 -----------i~~~g~~~~~~~~~~   95 (111)
                                 +.|+|++.......+
T Consensus       163 vmIdh~~rkLrlIDWGLAEFYHp~~e  188 (338)
T KOG0668|consen  163 VMIDHELRKLRLIDWGLAEFYHPGKE  188 (338)
T ss_pred             eeechhhceeeeeecchHhhcCCCce
Confidence                       489999876655433

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.21  E-value=7.4e-12  Score=71.56  Aligned_cols=102  Identities=28%  Similarity=0.293  Sum_probs=72.1

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+|++++.+++........+++++..+.+........   .++..+...++.+++.++.++|+.   +++|+|+++.|
T Consensus        44 l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~n  117 (244)
T smart00220       44 LKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKKRG---RLSEDEARFYARQILSALEYLHSN---GIIHRDLKPEN  117 (244)
T ss_pred             CCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHH
Confidence            479999999999987665556666555544433332211   178888999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                +.|||.+........   .....++..|++|
T Consensus       118 i~~~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~~p  155 (244)
T smart00220      118 ILLDEDGHVKLADFGLARQLDPGGL---LTTFVGTPEYMAP  155 (244)
T ss_pred             eEECCCCcEEEccccceeeeccccc---cccccCCcCCCCH
Confidence                      378887765544321   1233455666665

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.21  E-value=1.5e-12  Score=74.23  Aligned_cols=110  Identities=24%  Similarity=0.264  Sum_probs=69.0

Q ss_pred             CCCccceeeeeeeeeCCc-----cchhhhhhhhhhcccCcC-CCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeec
Q 047898            1 LKHENLVELLGYCVEGNL-----RDELIWIIHVITCKKGVQ-GAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQR   74 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~   74 (111)
                      ++||||+++++.......     .++++-+...+++.+... ...+..-+++.+.+.++.+++.|+.++|.. .+...|+
T Consensus        75 f~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~  153 (302)
T KOG2345|consen   75 FNSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHR  153 (302)
T ss_pred             hCCcchHHHHHHHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCccccc
Confidence            478999999887764322     222333333333322221 222333489999999999999999999998 3348999


Q ss_pred             CCCCCCc----------CCCcccccCCCCcccc-------cccccCccccccCC
Q 047898           75 DIRSSNI----------ADFNLSNQAPNMAARL-------HSTRVLGTFSYHAP  111 (111)
Q Consensus        75 ~l~~~ni----------~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~aP  111 (111)
                      |+||.||          .|||.+......-...       .......|..|.||
T Consensus       154 DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAP  207 (302)
T KOG2345|consen  154 DIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAP  207 (302)
T ss_pred             CCCcceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCc
Confidence            9999994          6888765543221110       01223467788887

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.15  E-value=5.6e-11  Score=76.03  Aligned_cols=61  Identities=25%  Similarity=0.284  Sum_probs=46.7

Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           47 MTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        47 ~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      ..+..++.|++.|+.|+|+.   +++|||+||+|           ++|||+++.+...... ......+++.||||
T Consensus       255 ~~i~~i~~qll~aL~yLH~~---gIiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~-~~~~~~~t~~Y~AP  326 (566)
T PLN03225        255 KIIQTIMRQILFALDGLHST---GIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINY-IPKEFLLDPRYAAP  326 (566)
T ss_pred             HHHHHHHHHHHHHHHHHHHC---CEEeCcCCHHHEEEeCCCCcEEEEeCCCcccccccccc-CCcccccCCCccCh
Confidence            34557889999999999999   99999999999           4799998765432221 12345678889987

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.14  E-value=8.7e-13  Score=76.09  Aligned_cols=104  Identities=26%  Similarity=0.308  Sum_probs=66.9

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhh--cccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVIT--CKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSS   79 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~   79 (111)
                      +.||||+++|.+...+.-++-.+.|+...  +...... .....+++...-.+....+.|+.||-...  .++|||+||+
T Consensus       121 ~cp~IVkfyGa~F~EGdcWiCMELMd~SlDklYk~vy~-vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPS  197 (361)
T KOG1006|consen  121 NCPNIVKFYGALFSEGDCWICMELMDISLDKLYKRVYS-VQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPS  197 (361)
T ss_pred             CCcHHHHHhhhhhcCCceeeeHHHHhhhHHHHHHHHHH-HHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChh
Confidence            35899999998876554444334433211  0111111 11223666666666666788999998765  8999999999


Q ss_pred             Cc----------CCCcccccCCCCcccccccccCccccccCC
Q 047898           80 NI----------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 ni----------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      ||          +|||++.++.+.--   .+.-.|...||||
T Consensus       198 NILldr~G~vKLCDFGIcGqLv~SiA---kT~daGCrpYmAP  236 (361)
T KOG1006|consen  198 NILLDRHGDVKLCDFGICGQLVDSIA---KTVDAGCRPYMAP  236 (361)
T ss_pred             heEEecCCCEeeecccchHhHHHHHH---hhhccCCccccCh
Confidence            94          89999887654321   2234688889998

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.14  E-value=3.7e-11  Score=75.76  Aligned_cols=64  Identities=25%  Similarity=0.289  Sum_probs=47.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           44 LDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        44 l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +++..+..++.|++.++.|+|+.   +++|+|++++|          ++|||.+......... ......+++.|+||
T Consensus       306 ~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~g~~tp~Y~aP  379 (507)
T PLN03224        306 RDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINF-NPLYGMLDPRYSPP  379 (507)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCcc-CccccCCCcceeCh
Confidence            56778888999999999999999   99999999999          3799988654332211 01112336778877

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.13  E-value=9e-11  Score=71.23  Aligned_cols=108  Identities=19%  Similarity=0.156  Sum_probs=74.0

Q ss_pred             CCCccceeeeeeeeeCC-ccchhhhhhhhhhcccCcC-----CCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeec
Q 047898            1 LKHENLVELLGYCVEGN-LRDELIWIIHVITCKKGVQ-----GAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQR   74 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~   74 (111)
                      +.|||+..+.+++.+.. .++..+-.+..+.+..++.     .-.....++..+...++.|+..|+.|+|+.   +++|.
T Consensus       344 ~sH~nll~V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHk  420 (563)
T KOG1024|consen  344 ASHPNLLSVLGVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHK  420 (563)
T ss_pred             CcCCCccceeEEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccc
Confidence            36999999999987643 2333433444444444443     333344477788889999999999999999   99999


Q ss_pred             CCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           75 DIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        75 ~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      ||-.+|          ++|-.++|.+...+........--+..||+|
T Consensus       421 DiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMsl  467 (563)
T KOG1024|consen  421 DIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSL  467 (563)
T ss_pred             hhhhhcceehhheeEEeccchhccccCcccccccCCCCCCcccccCH
Confidence            999999          4666777766655443322333346778875

>PRK10345 hypothetical protein; Provisional

Probab=99.11  E-value=4.2e-11  Score=67.86  Aligned_cols=71  Identities=15%  Similarity=0.152  Sum_probs=47.1

Q ss_pred             CCccceeeeeeeeeCCccchhhhh-hhh-----hhcccCcCCCCCCCCCCHHHHHHHHHHHHHHH-HHhhhcCCCCeeec
Q 047898            2 KHENLVELLGYCVEGNLRDELIWI-IHV-----ITCKKGVQGAQPSPVLDWMTRVRIVVDALRGL-EYLHEKVQPSIIQR   74 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l-~~lh~~~~~~i~h~   74 (111)
                      +||||++++|++.++.....+++. ++.     +++...+..    ..++..  ..++.+++.++ .|+|++   +|+|+
T Consensus        59 ~h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~----~~~~e~--~~~~~~~L~~l~~yLh~~---~Ivhr  129 (210)
T PRK10345         59 DWSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQ----CRYEED--VAQLRQLLKKLKRYLLDN---RIVTM  129 (210)
T ss_pred             CCcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHc----ccccHh--HHHHHHHHHHHHHHHHHC---CEeec
Confidence            689999999999986533343332 221     233333321    124444  34567777777 899999   99999


Q ss_pred             CCCCCCc
Q 047898           75 DIRSSNI   81 (111)
Q Consensus        75 ~l~~~ni   81 (111)
                      |++|+||
T Consensus       130 DlKp~NI  136 (210)
T PRK10345        130 ELKPQNI  136 (210)
T ss_pred             CCCHHHE
Confidence            9999994

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.10  E-value=1.1e-10  Score=78.47  Aligned_cols=64  Identities=34%  Similarity=0.552  Sum_probs=49.6

Q ss_pred             CHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC----------cCCCcccccCC----------C----Ccc-cc-c
Q 047898           45 DWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAP----------N----MAA-RL-H   98 (111)
Q Consensus        45 ~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n----------i~~~g~~~~~~----------~----~~~-~~-~   98 (111)
                      .....++++.+|++|+.|+|+.   +++|||+||.|          |.|||++....          .    ... .. .
T Consensus       695 ~~d~~wrLFreIlEGLaYIH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~  771 (1351)
T KOG1035|consen  695 QRDEAWRLFREILEGLAYIHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGD  771 (1351)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcc
Confidence            4678899999999999999999   99999999999          48999986621          0    000 00 1


Q ss_pred             ccccCccccccCC
Q 047898           99 STRVLGTFSYHAP  111 (111)
Q Consensus        99 ~~~~~~~~~~~aP  111 (111)
                      .++.+||--|+||
T Consensus       772 ~Ts~VGTalYvAP  784 (1351)
T KOG1035|consen  772 LTSQVGTALYVAP  784 (1351)
T ss_pred             cccccceeeeecH
Confidence            3456899999998

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.06  E-value=1.6e-10  Score=70.24  Aligned_cols=40  Identities=28%  Similarity=0.400  Sum_probs=34.3

Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeeecCC-CCCC----------cCCCcccccCCC
Q 047898           50 VRIVVDALRGLEYLHEKVQPSIIQRDI-RSSN----------IADFNLSNQAPN   92 (111)
Q Consensus        50 ~~~~~~i~~~l~~lh~~~~~~i~h~~l-~~~n----------i~~~g~~~~~~~   92 (111)
                      ..++.+++.++.++|+.   +++|+|+ ||+|          ++|||+++....
T Consensus       114 ~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~  164 (365)
T PRK09188        114 PAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRR  164 (365)
T ss_pred             HHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEECccceeccc
Confidence            35678899999999999   9999999 9999          479999886543

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.06  E-value=3e-10  Score=68.29  Aligned_cols=96  Identities=14%  Similarity=0.167  Sum_probs=62.6

Q ss_pred             ceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCc----
Q 047898            6 LVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI----   81 (111)
Q Consensus         6 iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~ni----   81 (111)
                      +|++.++|.-.+...++++.+ ..+..+++... +-..++.+.+..++.|++.++.+||+.   +++|-|+||+||    
T Consensus       153 cv~m~~wFdyrghiCivfell-G~S~~dFlk~N-~y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvs  227 (415)
T KOG0671|consen  153 CVQMRDWFDYRGHICIVFELL-GLSTFDFLKEN-NYIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVS  227 (415)
T ss_pred             EEeeehhhhccCceEEEEecc-ChhHHHHhccC-CccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEec
Confidence            355555555433222233322 22234444432 223389999999999999999999999   999999999993    


Q ss_pred             --------------------------CCCcccccCCCCcccccccccCccccccCC
Q 047898           82 --------------------------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        82 --------------------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                                .|||.+......     .++.+.|..|.||
T Consensus       228 s~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~-----hs~iVsTRHYRAP  278 (415)
T KOG0671|consen  228 SEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEH-----HSTIVSTRHYRAP  278 (415)
T ss_pred             cceEEEeccCCccceeccCCCcceEEEecCCcceeccC-----cceeeeccccCCc
Confidence                                      567666543322     2455678888887

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.05  E-value=1.8e-10  Score=65.31  Aligned_cols=105  Identities=28%  Similarity=0.268  Sum_probs=70.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+|++++++++........+++++....+..........  ++......++.+++.++.++|+.   +++|+|+++.|
T Consensus        54 ~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~n  128 (225)
T smart00221       54 LKHPNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKGGK--LSEEEARFYLRQILEALEYLHSL---GIVHRDLKPEN  128 (225)
T ss_pred             CCCCChhhheeeeecCCceEEEEeccCCCCHHHHHHhcccC--CCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHH
Confidence            47899999999988765555555555544443333222111  67888889999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+......... ......++..|++|
T Consensus       129 i~v~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~~~~p  168 (225)
T smart00221      129 ILLGMDGLVKLADFGLARFIHRDLAA-LLKTVKGTPFYLAP  168 (225)
T ss_pred             EEEcCCCCEEEeeCceeeEecCcccc-cccceeccCCcCCH
Confidence                      4788877665443200 01223445556654

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.05  E-value=6.8e-11  Score=68.71  Aligned_cols=84  Identities=14%  Similarity=0.351  Sum_probs=55.5

Q ss_pred             CccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCc-
Q 047898            3 HENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI-   81 (111)
Q Consensus         3 h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~ni-   81 (111)
                      |.||+.-+++......  ..+..++..+.+++. .......+.+.....++.|+++|++|||++   .++|||+|.+|| 
T Consensus        80 H~hIi~tY~vaFqt~d--~YvF~qE~aP~gdL~-snv~~~GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiL  153 (378)
T KOG1345|consen   80 HQHIIDTYEVAFQTSD--AYVFVQEFAPRGDLR-SNVEAAGIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENIL  153 (378)
T ss_pred             chhhhHHHHHHhhcCc--eEEEeeccCccchhh-hhcCcccccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEE
Confidence            5677766655433221  222233333333322 223334478888889999999999999999   999999999993 


Q ss_pred             -----------CCCcccccCCC
Q 047898           82 -----------ADFNLSNQAPN   92 (111)
Q Consensus        82 -----------~~~g~~~~~~~   92 (111)
                                 +|||..+....
T Consensus       154 if~~df~rvKlcDFG~t~k~g~  175 (378)
T KOG1345|consen  154 IFDADFYRVKLCDFGLTRKVGT  175 (378)
T ss_pred             EecCCccEEEeeecccccccCc
Confidence                       78887765443

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.05  E-value=1.1e-10  Score=74.94  Aligned_cols=104  Identities=23%  Similarity=0.286  Sum_probs=68.3

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+|++.....++.....   ...|+.+.. ++.........+....+-.++.|++.|+.|+|+.   ++.|||++++|
T Consensus       378 l~h~~~~e~l~~~~~~~~~---~~~mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~en  450 (601)
T KOG0590|consen  378 LSHPNIIETLDIVQEIDGI---LQSMEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLEN  450 (601)
T ss_pred             ccCCchhhhHHHHhhcccc---hhhhhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhc---CceeccCcccc
Confidence            4678877766666543222   122333322 2222222222377788889999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCccc--ccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAAR--LHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~--~~~~~~~~~~~~~aP  111 (111)
                                |.|||.+....-..+.  ......+|+-.|+||
T Consensus       451 ll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~ap  493 (601)
T KOG0590|consen  451 LLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAP  493 (601)
T ss_pred             EEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCc
Confidence                      4889987655443332  223456788888887

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=98.99  E-value=8.6e-10  Score=65.82  Aligned_cols=64  Identities=30%  Similarity=0.501  Sum_probs=52.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC---------------cCCCcccccCCCCccccc-----ccccC
Q 047898           44 LDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN---------------IADFNLSNQAPNMAARLH-----STRVL  103 (111)
Q Consensus        44 l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n---------------i~~~g~~~~~~~~~~~~~-----~~~~~  103 (111)
                      |+..++..++.|++.-+.++|++   .+|.||+||+|               +.|||+++.........+     ..+..
T Consensus       121 FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLs  197 (449)
T KOG1165|consen  121 FSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLS  197 (449)
T ss_pred             ccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCccccccccc
Confidence            88999999999999999999999   99999999999               489999987665432211     34567


Q ss_pred             ccccccC
Q 047898          104 GTFSYHA  110 (111)
Q Consensus       104 ~~~~~~a  110 (111)
                      ||-+||+
T Consensus       198 GTARYMS  204 (449)
T KOG1165|consen  198 GTARYMS  204 (449)
T ss_pred             cceeeeE
Confidence            8999985

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=98.97  E-value=1.3e-09  Score=60.86  Aligned_cols=76  Identities=32%  Similarity=0.414  Sum_probs=56.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|++++++++++........++++.....+........  ..++......++.+++.++.++|+.   +++|+|+++.|
T Consensus        48 l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~n  122 (215)
T cd00180          48 LNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENE--GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPEN  122 (215)
T ss_pred             cCCCCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhh
Confidence            468899999999987655555555554333333322211  2378889999999999999999999   99999999999


Q ss_pred             c
Q 047898           81 I   81 (111)
Q Consensus        81 i   81 (111)
                      +
T Consensus       123 i  123 (215)
T cd00180         123 I  123 (215)
T ss_pred             E
Confidence            3

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=98.96  E-value=6.3e-10  Score=66.91  Aligned_cols=68  Identities=29%  Similarity=0.411  Sum_probs=51.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC---------------cCCCcccc--cCCCCccc--c---c
Q 047898           41 SPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN---------------IADFNLSN--QAPNMAAR--L---H   98 (111)
Q Consensus        41 ~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n---------------i~~~g~~~--~~~~~~~~--~---~   98 (111)
                      ...++..++..++.|++.++.++|+.   +++|||+||.|               +.|||+++  ........  .   .
T Consensus       116 ~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~  192 (322)
T KOG1164|consen  116 PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRP  192 (322)
T ss_pred             CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCC
Confidence            34589999999999999999999999   99999999999               36999998  33222211  1   0


Q ss_pred             -ccccCccccccCC
Q 047898           99 -STRVLGTFSYHAP  111 (111)
Q Consensus        99 -~~~~~~~~~~~aP  111 (111)
                       .....||.+|.++
T Consensus       193 ~~~~~rGT~ry~S~  206 (322)
T KOG1164|consen  193 QKGLFRGTLRYASI  206 (322)
T ss_pred             CccCCCCccccccH
Confidence             1234588888753

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=98.92  E-value=4.9e-10  Score=67.91  Aligned_cols=77  Identities=22%  Similarity=0.338  Sum_probs=60.9

Q ss_pred             CccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC--
Q 047898            3 HENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN--   80 (111)
Q Consensus         3 h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n--   80 (111)
                      +.||+.+.+++..++...++.+++++.....+...      ++..++..++..+..|+.++|.+   +|+|||+||.|  
T Consensus        94 ~~ni~~~~~~~rnnd~v~ivlp~~~H~~f~~l~~~------l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL  164 (418)
T KOG1167|consen   94 SDNIIKLNGCFRNNDQVAIVLPYFEHDRFRDLYRS------LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFL  164 (418)
T ss_pred             chhhhcchhhhccCCeeEEEecccCccCHHHHHhc------CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccc
Confidence            45788888888877766666677666554444322      56778889999999999999999   99999999999  


Q ss_pred             ---------cCCCcccc
Q 047898           81 ---------IADFNLSN   88 (111)
Q Consensus        81 ---------i~~~g~~~   88 (111)
                               +.|||++.
T Consensus       165 ~n~~t~rg~LvDFgLA~  181 (418)
T KOG1167|consen  165 YNRRTQRGVLVDFGLAQ  181 (418)
T ss_pred             cccccCCceEEechhHH
Confidence                     48999876

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.90  E-value=1e-09  Score=68.11  Aligned_cols=75  Identities=23%  Similarity=0.341  Sum_probs=53.3

Q ss_pred             ccceeeeeeeeeCCccch-hhhhhhhh--hcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            4 ENLVELLGYCVEGNLRDE-LIWIIHVI--TCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         4 ~~iv~l~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ..||+|++.|...++... ++.+++..  .+..... ...-..++...+..++.|++.||+|||..+  +|||-||||+|
T Consensus       142 ~~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~-~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPEN  218 (590)
T KOG1290|consen  142 KCVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIK-YSNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPEN  218 (590)
T ss_pred             ceeeeeeccceecCCCCcEEEEEehhhhhHHHHHHH-HhCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcce
Confidence            369999999997666543 33333321  1111111 122233899999999999999999999987  99999999999


Q ss_pred             c
Q 047898           81 I   81 (111)
Q Consensus        81 i   81 (111)
                      |
T Consensus       219 v  219 (590)
T KOG1290|consen  219 V  219 (590)
T ss_pred             e
Confidence            4

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=98.89  E-value=1.1e-09  Score=66.91  Aligned_cols=40  Identities=30%  Similarity=0.532  Sum_probs=33.6

Q ss_pred             CHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC--------------cCCCccc
Q 047898           45 DWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN--------------IADFNLS   87 (111)
Q Consensus        45 ~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n--------------i~~~g~~   87 (111)
                      +.-...-++.|+++|+.|+|.+   ++.|||+|+.|              ++|||.+
T Consensus       339 s~r~~~~~laQlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCc  392 (598)
T KOG4158|consen  339 SYRTGRVILAQLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCC  392 (598)
T ss_pred             chHHHHHHHHHHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEccccee
Confidence            3344556778999999999999   99999999999              3889875

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=98.87  E-value=3.1e-09  Score=61.11  Aligned_cols=64  Identities=28%  Similarity=0.527  Sum_probs=50.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-------------cCCCcccccCCCCccccc-----ccccCcc
Q 047898           44 LDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-------------IADFNLSNQAPNMAARLH-----STRVLGT  105 (111)
Q Consensus        44 l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-------------i~~~g~~~~~~~~~~~~~-----~~~~~~~  105 (111)
                      ++..+++-++-|++.-++|+|.+   +++||||||.|             ++|||+++...+.....+     .....||
T Consensus       108 ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGT  184 (341)
T KOG1163|consen  108 FTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGT  184 (341)
T ss_pred             hhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccchhhhccccccccCccccCCcccee
Confidence            78888999999999999999999   99999999999             489999987665443321     2335677


Q ss_pred             ccccC
Q 047898          106 FSYHA  110 (111)
Q Consensus       106 ~~~~a  110 (111)
                      -+|.+
T Consensus       185 aRYAS  189 (341)
T KOG1163|consen  185 ARYAS  189 (341)
T ss_pred             eeehh
Confidence            77653

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=98.84  E-value=3.7e-09  Score=59.20  Aligned_cols=46  Identities=13%  Similarity=0.203  Sum_probs=40.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhh-cCCCCeeecCCCCCC---------cCCCcccccCCC
Q 047898           44 LDWMTRVRIVVDALRGLEYLHE-KVQPSIIQRDIRSSN---------IADFNLSNQAPN   92 (111)
Q Consensus        44 l~~~~~~~~~~~i~~~l~~lh~-~~~~~i~h~~l~~~n---------i~~~g~~~~~~~   92 (111)
                      ++..+...++.+++.++.++|+ .   +++|+|++|+|         +.|||++.....
T Consensus       114 ~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll~~~~~~liDFG~a~~~~~  169 (190)
T cd05145         114 LEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILYHDGKPYIIDVSQAVELDH  169 (190)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEEECCCEEEEEcccceecCC
Confidence            6677888899999999999999 8   99999999999         378998876543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=98.76  E-value=4.6e-09  Score=58.85  Aligned_cols=45  Identities=16%  Similarity=0.229  Sum_probs=39.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHh-hhcCCCCeeecCCCCCC---------cCCCcccccC
Q 047898           43 VLDWMTRVRIVVDALRGLEYL-HEKVQPSIIQRDIRSSN---------IADFNLSNQA   90 (111)
Q Consensus        43 ~l~~~~~~~~~~~i~~~l~~l-h~~~~~~i~h~~l~~~n---------i~~~g~~~~~   90 (111)
                      .++..+...++.|++.++.++ |+.   +++|+|++|+|         +.|||++...
T Consensus       113 ~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~~~~v~LiDFG~a~~~  167 (190)
T cd05147         113 PLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYHDGKLYIIDVSQSVEH  167 (190)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEECCcEEEEEccccccC
Confidence            478888999999999999998 788   99999999999         3799987644

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=98.75  E-value=2e-08  Score=59.51  Aligned_cols=107  Identities=26%  Similarity=0.369  Sum_probs=69.8

Q ss_pred             CCc-cceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            2 KHE-NLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         2 ~h~-~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      .|+ +++.+.+++........+.+++....+............++......+..|++.++.++|+.   +++|||++|+|
T Consensus        55 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~n  131 (384)
T COG0515          55 NHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPEN  131 (384)
T ss_pred             cCCcceeeEEEEEecCCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHH
Confidence            455 79999999865554334444444333331111110002478888999999999999999999   99999999999


Q ss_pred             -----------cCCCcccccCCCCcccc----cccccCccccccCC
Q 047898           81 -----------IADFNLSNQAPNMAARL----HSTRVLGTFSYHAP  111 (111)
Q Consensus        81 -----------i~~~g~~~~~~~~~~~~----~~~~~~~~~~~~aP  111 (111)
                                 +.|||.++.........    ......++..|++|
T Consensus       132 il~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~p  177 (384)
T COG0515         132 ILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAP  177 (384)
T ss_pred             eeecCCCCeEEEeccCcceecCCCCccccccccccccccccccCCH
Confidence                       37888877544332211    13456778888876

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=98.70  E-value=4.6e-09  Score=61.52  Aligned_cols=65  Identities=22%  Similarity=0.312  Sum_probs=55.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhc
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEK   66 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~   66 (111)
                      +.||||..++|.|..+.....+..+|..+++...+....+ ...+..|...++..++.|+.|+|+.
T Consensus       244 fshpnilpvlgacnsppnlv~isq~mp~gslynvlhe~t~-vvvd~sqav~faldiargmaflhsl  308 (448)
T KOG0195|consen  244 FSHPNILPVLGACNSPPNLVIISQYMPFGSLYNVLHEQTS-VVVDHSQAVRFALDIARGMAFLHSL  308 (448)
T ss_pred             ecCCchhhhhhhccCCCCceEeeeeccchHHHHHHhcCcc-EEEecchHHHHHHHHHhhHHHHhhc
Confidence            3699999999999998777778888998888888776544 3368889999999999999999997

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.69  E-value=9.8e-09  Score=65.64  Aligned_cols=77  Identities=18%  Similarity=0.196  Sum_probs=51.8

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|++++....++.......++++++...++...+           .....++.+++.++.++|+.   +++|+|++|+|
T Consensus       393 l~~~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l-----------~~~~~~~~~i~~~L~~lH~~---giiHrDlkp~N  458 (535)
T PRK09605        393 ARRAGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVL-----------EGNPELVRKVGEIVAKLHKA---GIVHGDLTTSN  458 (535)
T ss_pred             hcccCCCeeEEEEEeCCCCEEEEEecCCCcHHHHH-----------HHHHHHHHHHHHHHHHHHhC---CCccCCCChHH
Confidence            35667766655555544444444544433322211           13456788999999999999   99999999999


Q ss_pred             ---------cCCCcccccCC
Q 047898           81 ---------IADFNLSNQAP   91 (111)
Q Consensus        81 ---------i~~~g~~~~~~   91 (111)
                               +.|||.++...
T Consensus       459 ILl~~~~~~liDFGla~~~~  478 (535)
T PRK09605        459 FIVRDDRLYLIDFGLGKYSD  478 (535)
T ss_pred             EEEECCcEEEEeCcccccCC
Confidence                     37999887643

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=98.54  E-value=1.7e-08  Score=63.57  Aligned_cols=61  Identities=15%  Similarity=0.190  Sum_probs=48.1

Q ss_pred             hcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-----------cCCCcccccCCCC
Q 047898           30 TCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-----------IADFNLSNQAPNM   93 (111)
Q Consensus        30 ~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-----------i~~~g~~~~~~~~   93 (111)
                      .+...+........|....+..|+.|+..||..|-.+   +++|.||+|.|           ++|||.|......
T Consensus       519 NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~en  590 (752)
T KOG0670|consen  519 NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNILKLCDFGSASFASEN  590 (752)
T ss_pred             hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcceeeeccCccccccccc
Confidence            3444444444555577888899999999999999999   99999999999           4899988665443

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=98.52  E-value=8.1e-08  Score=61.25  Aligned_cols=98  Identities=22%  Similarity=0.258  Sum_probs=69.9

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCc
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI   81 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~ni   81 (111)
                      +||.+|++.-.++.....   +.+++....+...........++......+....+.+++++|..   +++++|+|++||
T Consensus        55 ~~~f~v~lhyafqt~~kl---~l~ld~~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~eni  128 (612)
T KOG0603|consen   55 NTPFLVKLHYAFQTDGKL---YLILDFLRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENV  128 (612)
T ss_pred             CCCceeeeeeeeccccch---hHhhhhcccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccce
Confidence            378899998888875543   33444333333333334445577888888889999999999999   999999999994


Q ss_pred             ----------CCCcccccCCCCcccccccccCccccccCC
Q 047898           82 ----------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        82 ----------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                .|||.++......      ..+||..||||
T Consensus       129 lld~~Ghi~~tdfglske~v~~~------~~cgt~eymAp  162 (612)
T KOG0603|consen  129 LLLLEGHIKLTDFGLSKEAVKEK------IACGTYEYRAP  162 (612)
T ss_pred             eecccCccccCCchhhhHhHhhh------hcccchhhhhh
Confidence                      6788776543322      22789999987

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=98.52  E-value=9.3e-08  Score=60.12  Aligned_cols=86  Identities=26%  Similarity=0.367  Sum_probs=67.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCe-eecCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSI-IQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i-~h~~l~~~   79 (111)
                      ++|.|+.++.|.+.++.....+..+...+.+.+.+...  ...+++.-...+...++.|+.|+|..   .+ .|+.++.+
T Consensus         4 l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~--~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~l~s~   78 (484)
T KOG1023|consen    4 LDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE--DIKLDYFFILSFIRDISKGLAYLHNS---PIGYHGALKSS   78 (484)
T ss_pred             cchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc--ccCccHHHHHHHHHHHHHHHHHHhcC---cceeeeeeccc
Confidence            57999999999999886555555666777776666542  22367777778889999999999998   55 89999999


Q ss_pred             C----------cCCCcccccCC
Q 047898           80 N----------IADFNLSNQAP   91 (111)
Q Consensus        80 n----------i~~~g~~~~~~   91 (111)
                      |          ++|||+.....
T Consensus        79 nClvd~~w~lklt~~Gl~~~~~  100 (484)
T KOG1023|consen   79 NCLVDSRWVLKLTDFGLNSLLE  100 (484)
T ss_pred             cceeeeeEEEEechhhhccccc
Confidence            9          58999877653

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.47  E-value=7.3e-08  Score=54.64  Aligned_cols=77  Identities=19%  Similarity=0.162  Sum_probs=49.0

Q ss_pred             CccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCc-
Q 047898            3 HENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI-   81 (111)
Q Consensus         3 h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~ni-   81 (111)
                      |+++.....++...+...++++++....+...+..      ... +...++.+++.++.++|+.   +++|+|+++.|+ 
T Consensus        58 ~~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~~~~~------~~~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil  127 (211)
T PRK14879         58 KAGVNVPAVYFVDPENFIIVMEYIEGEPLKDLINS------NGM-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMI  127 (211)
T ss_pred             HCCCCCCeEEEEeCCCCEEEEEEeCCcCHHHHHHh------ccH-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEE
Confidence            45555544455444433444444443333222211      111 5677888999999999999   999999999993 


Q ss_pred             --------CCCccccc
Q 047898           82 --------ADFNLSNQ   89 (111)
Q Consensus        82 --------~~~g~~~~   89 (111)
                              .|||.+..
T Consensus       128 ~~~~~~~liDf~~a~~  143 (211)
T PRK14879        128 LSGGKIYLIDFGLAEF  143 (211)
T ss_pred             EECCCEEEEECCcccC
Confidence                    78887764

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.35  E-value=1.8e-07  Score=63.02  Aligned_cols=64  Identities=25%  Similarity=0.205  Sum_probs=49.2

Q ss_pred             hhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-----------------cCCC
Q 047898           22 LIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-----------------IADF   84 (111)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-----------------i~~~   84 (111)
                      +.++.+.|.+.+..-   .....++..++.++.|++.-+..+|..   +|||+||||.|                 ++||
T Consensus       772 v~ey~~~Gtlld~~N---~~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDf  845 (974)
T KOG1166|consen  772 VSEYSPYGTLLDLIN---TNKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLYLIDF  845 (974)
T ss_pred             eeeccccccHHHhhc---cCCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceEEEec
Confidence            334445555544433   445578888999999999999999999   99999999999                 4788


Q ss_pred             cccccCC
Q 047898           85 NLSNQAP   91 (111)
Q Consensus        85 g~~~~~~   91 (111)
                      |.+..+.
T Consensus       846 G~siDm~  852 (974)
T KOG1166|consen  846 GRSIDMK  852 (974)
T ss_pred             ccceeee
Confidence            8876544

>smart00090 RIO RIO-like kinase

Probab=98.35  E-value=7e-07  Score=51.80  Aligned_cols=44  Identities=18%  Similarity=0.231  Sum_probs=36.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhhcCCCC-eeecCCCCCCc---------CCCcccccC
Q 047898           44 LDWMTRVRIVVDALRGLEYLHEKVQPS-IIQRDIRSSNI---------ADFNLSNQA   90 (111)
Q Consensus        44 l~~~~~~~~~~~i~~~l~~lh~~~~~~-i~h~~l~~~ni---------~~~g~~~~~   90 (111)
                      +...+...++.|++.++.++|+.   + ++|+|++|+||         .|||.+...
T Consensus       145 ~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp~NIli~~~~i~LiDFg~a~~~  198 (237)
T smart00090      145 PEEEEEFELYDDILEEMRKLYKE---GELVHGDLSEYNILVHDGKVVIIDVSQSVEL  198 (237)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCChhhEEEECCCEEEEEChhhhcc
Confidence            45556678899999999999999   9 99999999993         678876543

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.24  E-value=4.3e-07  Score=51.06  Aligned_cols=37  Identities=27%  Similarity=0.467  Sum_probs=32.0

Q ss_pred             HHHHHHHHHHHHhhhcCCCCeeecCCCCCC---------cCCCcccccC
Q 047898           51 RIVVDALRGLEYLHEKVQPSIIQRDIRSSN---------IADFNLSNQA   90 (111)
Q Consensus        51 ~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n---------i~~~g~~~~~   90 (111)
                      .++.+++.++.++|+.   +++|+|+++.|         +.|||.+...
T Consensus        94 ~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~~~~~~liDfg~a~~~  139 (199)
T TIGR03724        94 ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVRDDKLYLIDFGLGKYS  139 (199)
T ss_pred             HHHHHHHHHHHHHHHC---CeecCCCCcceEEEECCcEEEEECCCCcCC
Confidence            6788999999999999   99999999999         3788877653

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=98.19  E-value=4.2e-06  Score=46.07  Aligned_cols=53  Identities=21%  Similarity=0.135  Sum_probs=38.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCc--------CCCcccccCCCCcccccccccCccccccCC
Q 047898           43 VLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI--------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        43 ~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~ni--------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      .+++.++..++.|++.|+.|+|+.   +      |++||        ..||.+......       ...+++.||||
T Consensus        13 ~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~fG~~~~~~~~-------~~~g~~~y~aP   73 (176)
T smart00750       13 PLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKLDGSVAFKTPE-------QSRVDPYFMAP   73 (176)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceeeccceEeeccc-------cCCCcccccCh
Confidence            389999999999999999999998   4      66663        126665543221       12578889998

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>PRK12274 serine/threonine protein kinase; Provisional

Probab=98.06  E-value=5.4e-06  Score=47.30  Aligned_cols=38  Identities=26%  Similarity=0.412  Sum_probs=32.0

Q ss_pred             HHHHHHHHHHHHhhhcCCCCeeecCC-CCCC----------cCCCcccccCC
Q 047898           51 RIVVDALRGLEYLHEKVQPSIIQRDI-RSSN----------IADFNLSNQAP   91 (111)
Q Consensus        51 ~~~~~i~~~l~~lh~~~~~~i~h~~l-~~~n----------i~~~g~~~~~~   91 (111)
                      .++.++..++.++|+.   +++|+|+ ++.|          ++|||++....
T Consensus        95 ~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~  143 (218)
T PRK12274         95 AYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGN  143 (218)
T ss_pred             HHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecC
Confidence            4667889999999999   9999999 6888          48999887443

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=97.99  E-value=5.3e-06  Score=54.08  Aligned_cols=103  Identities=26%  Similarity=0.283  Sum_probs=67.7

Q ss_pred             CccceeeeeeeeeCCccchhhhhhhhhhcccCcCCC-CCCC-CCCHHHHHHHHHHHHHHHHHhh-hcCCCCeeecCCCCC
Q 047898            3 HENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGA-QPSP-VLDWMTRVRIVVDALRGLEYLH-EKVQPSIIQRDIRSS   79 (111)
Q Consensus         3 h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~l~~~~~~~~~~~i~~~l~~lh-~~~~~~i~h~~l~~~   79 (111)
                      |.|++.+++....+.......++-..+..   .... .... ..+.....+++.|+..++.|+| ..   ++.|++++|+
T Consensus        80 h~n~~~~~~~~~~~~~~~~~~~~s~g~~~---f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~  153 (601)
T KOG0590|consen   80 HSNTVHMIEPSSSPRSYLLSLSYSDGGSL---FSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPS  153 (601)
T ss_pred             cccccccCCccCCCcccccccCccccccc---ccccccCCccCCCCcchhhhhhhhccCccccCccc---ccccCCCCCc
Confidence            88999998888776644444344222222   2211 2222 3455667788999999999999 77   9999999999


Q ss_pred             C-----------cCCCcccccCCC-CcccccccccCc-cccccCC
Q 047898           80 N-----------IADFNLSNQAPN-MAARLHSTRVLG-TFSYHAP  111 (111)
Q Consensus        80 n-----------i~~~g~~~~~~~-~~~~~~~~~~~~-~~~~~aP  111 (111)
                      |           +.|||++..... ..........+| ++.|+||
T Consensus       154 n~~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~  198 (601)
T KOG0590|consen  154 NSLLDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAP  198 (601)
T ss_pred             cchhccCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCc
Confidence            8           378888766554 222222334566 8888886

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=97.93  E-value=4.1e-06  Score=48.40  Aligned_cols=76  Identities=17%  Similarity=0.210  Sum_probs=46.8

Q ss_pred             CCCccceeeeeeeeeCC--------ccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCee
Q 047898            1 LKHENLVELLGYCVEGN--------LRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSII   72 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~   72 (111)
                      ++|++|....+++...+        ...++.++++..++...       ..++.    ....++..++..+|+.   +++
T Consensus        92 L~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~-------~~~~~----~~~~~i~~~l~~lH~~---gi~  157 (232)
T PRK10359         92 VRSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDM-------PEISE----DVKAKIKASIESLHQH---GMV  157 (232)
T ss_pred             HHHCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHh-------hhccH----HHHHHHHHHHHHHHHc---CCc
Confidence            35788888877765432        12223333333222221       01222    2345888899999999   999


Q ss_pred             ecCCCCCCc---------CCCcccccC
Q 047898           73 QRDIRSSNI---------ADFNLSNQA   90 (111)
Q Consensus        73 h~~l~~~ni---------~~~g~~~~~   90 (111)
                      |+|++|.|+         .|||.....
T Consensus       158 H~Dikp~Nili~~~gi~liDfg~~~~~  184 (232)
T PRK10359        158 SGDPHKGNFIVSKNGLRIIDLSGKRCT  184 (232)
T ss_pred             cCCCChHHEEEeCCCEEEEECCCcccc
Confidence            999999993         677765443

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=97.91  E-value=3.9e-05  Score=40.81  Aligned_cols=45  Identities=18%  Similarity=0.172  Sum_probs=34.0

Q ss_pred             CHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCc----------CCCccccc
Q 047898           45 DWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQ   89 (111)
Q Consensus        45 ~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~ni----------~~~g~~~~   89 (111)
                      +......++.+++.++..+|.....+++|+|+++.|+          .||+.+..
T Consensus        84 ~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~  138 (155)
T cd05120          84 SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY  138 (155)
T ss_pred             CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence            4456667788899999999986333699999999993          56766553

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=97.86  E-value=9e-06  Score=51.38  Aligned_cols=62  Identities=31%  Similarity=0.472  Sum_probs=46.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC----------cCCCcccccCCCCc----ccccccccCcccccc
Q 047898           44 LDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMA----ARLHSTRVLGTFSYH  109 (111)
Q Consensus        44 l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n----------i~~~g~~~~~~~~~----~~~~~~~~~~~~~~~  109 (111)
                      .++..+..++.|+..|+.|   +   +.+|+|++|.|          |.|||+........    .........||.+||
T Consensus       356 ~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~Ym  429 (516)
T KOG1033|consen  356 RSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYM  429 (516)
T ss_pred             cchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhheeecccCCcccchhhhhhhcccccccC
Confidence            5677788889999999999   5   88999999999          47898865443332    011134568999999


Q ss_pred             CC
Q 047898          110 AP  111 (111)
Q Consensus       110 aP  111 (111)
                      +|
T Consensus       430 sP  431 (516)
T KOG1033|consen  430 SP  431 (516)
T ss_pred             CH
Confidence            98

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=97.82  E-value=3.1e-05  Score=43.69  Aligned_cols=40  Identities=18%  Similarity=0.215  Sum_probs=33.3

Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC----------cCCCcccccC
Q 047898           48 TRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQA   90 (111)
Q Consensus        48 ~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n----------i~~~g~~~~~   90 (111)
                      ....++.+++.++.++|+.   +++|+|++|.|          +.|||.+...
T Consensus       126 ~~~~~~~~i~~~l~~lh~~---gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~  175 (198)
T cd05144         126 DPEEVLDEILEEIVKAYKH---GIIHGDLSEFNILVDDDEKIYIIDWPQMVST  175 (198)
T ss_pred             cHHHHHHHHHHHHHHHHHC---CCCcCCCCcccEEEcCCCcEEEEECCccccC
Confidence            3456778999999999999   99999999999          3788887544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>cd05119 RIO RIO kinase family, catalytic domain

Probab=97.77  E-value=2.3e-05  Score=43.61  Aligned_cols=42  Identities=14%  Similarity=0.144  Sum_probs=35.1

Q ss_pred             HHHHHHHHHHHHHHHHhhh-cCCCCeeecCCCCCCc---------CCCcccccCC
Q 047898           47 MTRVRIVVDALRGLEYLHE-KVQPSIIQRDIRSSNI---------ADFNLSNQAP   91 (111)
Q Consensus        47 ~~~~~~~~~i~~~l~~lh~-~~~~~i~h~~l~~~ni---------~~~g~~~~~~   91 (111)
                      .+...++.+++.++.++|. .   +++|+|++|+|+         .|||.+....
T Consensus       114 ~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili~~~~~~liDfg~a~~~~  165 (187)
T cd05119         114 EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILVDDGKVYIIDVPQAVEID  165 (187)
T ss_pred             ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEEECCcEEEEECccccccc
Confidence            4567788999999999999 8   999999999993         6788776543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=97.77  E-value=2.4e-05  Score=45.58  Aligned_cols=35  Identities=17%  Similarity=0.275  Sum_probs=29.7

Q ss_pred             HHHHHHHHHHhhhcCCCCeeecCCCCCCc----------CCCcccccC
Q 047898           53 VVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQA   90 (111)
Q Consensus        53 ~~~i~~~l~~lh~~~~~~i~h~~l~~~ni----------~~~g~~~~~   90 (111)
                      +.+++.++.++|+.   +++|+|++|.||          .|||.+...
T Consensus       148 ~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~LIDfg~~~~~  192 (239)
T PRK01723        148 WQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFWLIDFDRGELR  192 (239)
T ss_pred             HHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEEEEECCCcccC
Confidence            46788999999999   999999999993          678776654

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=97.71  E-value=3.7e-05  Score=53.07  Aligned_cols=35  Identities=29%  Similarity=0.416  Sum_probs=30.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCc
Q 047898           44 LDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI   81 (111)
Q Consensus        44 l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~ni   81 (111)
                      +...+..-++.|++.|+..+|..   ++.|+|||.+||
T Consensus       117 L~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENI  151 (1431)
T KOG1240|consen  117 LVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENI  151 (1431)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHc---CccccccccceE
Confidence            45556667889999999999999   999999999993

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=97.41  E-value=6.6e-06  Score=49.81  Aligned_cols=78  Identities=19%  Similarity=0.227  Sum_probs=53.8

Q ss_pred             CCccceeeeeeeeeCCc-----cchhhhhhhhhhcccCcCCCCC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecC
Q 047898            2 KHENLVELLGYCVEGNL-----RDELIWIIHVITCKKGVQGAQP-SPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRD   75 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~   75 (111)
                      .|.|+|++..+..+...     ..++.++|+.+....++.+-+. +..+......+++.||++|+.|||++ .+.++|++
T Consensus       125 vHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~Ppiihgn  203 (458)
T KOG1266|consen  125 VHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-DPPIIHGN  203 (458)
T ss_pred             HHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-CCccccCC
Confidence            47788888877765433     2335577777766555543322 23355666678899999999999998 66788998


Q ss_pred             CCCCC
Q 047898           76 IRSSN   80 (111)
Q Consensus        76 l~~~n   80 (111)
                      +.-+.
T Consensus       204 lTc~t  208 (458)
T KOG1266|consen  204 LTCDT  208 (458)
T ss_pred             cchhh
Confidence            77655

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=97.38  E-value=0.00016  Score=40.93  Aligned_cols=44  Identities=18%  Similarity=0.202  Sum_probs=33.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHh-hhcCCCCeeecCCCCCCc---------CCCcccccC
Q 047898           44 LDWMTRVRIVVDALRGLEYL-HEKVQPSIIQRDIRSSNI---------ADFNLSNQA   90 (111)
Q Consensus        44 l~~~~~~~~~~~i~~~l~~l-h~~~~~~i~h~~l~~~ni---------~~~g~~~~~   90 (111)
                      ++..+...+..+++.++..+ |..   +++|+|+++.||         .|||.+...
T Consensus       121 ~~~~~~~~i~~~i~~~l~~l~H~~---glVHGDLs~~NIL~~~~~v~iIDF~qav~~  174 (197)
T cd05146         121 LNDEEMKNAYYQVLSMMKQLYKEC---NLVHADLSEYNMLWHDGKVWFIDVSQSVEP  174 (197)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEECCcEEEEECCCceeC
Confidence            44455566678889999888 888   999999999993         777765443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=96.97  E-value=0.00049  Score=38.87  Aligned_cols=37  Identities=32%  Similarity=0.449  Sum_probs=30.7

Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeeecCCCCCCc-------------CCCccccc
Q 047898           50 VRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI-------------ADFNLSNQ   89 (111)
Q Consensus        50 ~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~ni-------------~~~g~~~~   89 (111)
                      ..++..+-..+.-||..   .++|+|+..+|+             .|||++..
T Consensus       116 ~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen  116 AELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSSV  165 (229)
T ss_pred             HHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchhc
Confidence            56677777888999999   999999999993             68887653

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=96.94  E-value=0.00045  Score=47.73  Aligned_cols=52  Identities=37%  Similarity=0.641  Sum_probs=36.6

Q ss_pred             HHHHHHhhhcCCCCeeecCCCCCC----------cCCCcccccCCCC-cc------------cccccccCccccccCC
Q 047898           57 LRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNM-AA------------RLHSTRVLGTFSYHAP  111 (111)
Q Consensus        57 ~~~l~~lh~~~~~~i~h~~l~~~n----------i~~~g~~~~~~~~-~~------------~~~~~~~~~~~~~~aP  111 (111)
                      +.+++|+|+-   +++|+|+++.|          +.|||+++..... ..            .......+||+.|.||
T Consensus       153 vla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaP  227 (1205)
T KOG0606|consen  153 VLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAP  227 (1205)
T ss_pred             hHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccCh
Confidence            6789999999   99999999999          3688876542211 00            0112344789999987

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=96.92  E-value=0.00052  Score=45.15  Aligned_cols=70  Identities=13%  Similarity=0.185  Sum_probs=45.1

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      |+||+|++++...+..+...++.+-+.-..  ..+.   .   +....+..-+.||+.|+.|||..+  +++|+++.-..
T Consensus        66 lRHP~Il~yL~t~e~~~~~ylvTErV~Pl~--~~lk---~---l~~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~S  135 (690)
T KOG1243|consen   66 LRHPNILSYLDTTEEEGTLYLVTERVRPLE--TVLK---E---LGKEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDS  135 (690)
T ss_pred             ccCchhhhhhhhhcccCceEEEeeccccHH--HHHH---H---hHHHHHHHHHHHHHHHHHHHhccC--CeeeccEeeee
Confidence            689999999999887664433333222110  0000   0   223344455689999999998543  89999998886

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=96.63  E-value=0.003  Score=35.69  Aligned_cols=35  Identities=29%  Similarity=0.463  Sum_probs=27.9

Q ss_pred             HHHHHHHHHHHhhhcCCCCeeecCCCCCC---------cCCCccccc
Q 047898           52 IVVDALRGLEYLHEKVQPSIIQRDIRSSN---------IADFNLSNQ   89 (111)
Q Consensus        52 ~~~~i~~~l~~lh~~~~~~i~h~~l~~~n---------i~~~g~~~~   89 (111)
                      ++..+-.-+.-||..   +++|+|+.++|         +.|||++..
T Consensus        97 ~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~i~~IDfGLg~~  140 (204)
T COG3642          97 LLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGRIYFIDFGLGEF  140 (204)
T ss_pred             HHHHHHHHHHHHHhc---CeecCCCccceEEEeCCcEEEEECCcccc
Confidence            444555567889999   99999999999         378998764

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=96.38  E-value=0.0018  Score=41.93  Aligned_cols=78  Identities=12%  Similarity=-0.035  Sum_probs=49.8

Q ss_pred             CCCccceeeeeeeeeCCccch----hhhhhhh-hhcccCc------------CCCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 047898            1 LKHENLVELLGYCVEGNLRDE----LIWIIHV-ITCKKGV------------QGAQPSPVLDWMTRVRIVVDALRGLEYL   63 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~----~~~~~~~-~~~~~~~------------~~~~~~~~l~~~~~~~~~~~i~~~l~~l   63 (111)
                      +.|+|+|.+.++|....+...    +|-|... ..+++..            .+.......++...+.++.|+..|+.++
T Consensus       330 l~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sI  409 (655)
T KOG3741|consen  330 LCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSI  409 (655)
T ss_pred             hccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHH
Confidence            469999999999985443321    2222221 1111110            1111223367889999999999999999


Q ss_pred             hhcCCCCeeecCCCCCCc
Q 047898           64 HEKVQPSIIQRDIRSSNI   81 (111)
Q Consensus        64 h~~~~~~i~h~~l~~~ni   81 (111)
                      |+.   ++.-+-+.+.+|
T Consensus       410 Hss---GLAck~L~~~kI  424 (655)
T KOG3741|consen  410 HSS---GLACKTLDLKKI  424 (655)
T ss_pred             Hhc---CceeecccHhHe
Confidence            999   877777777664

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=96.15  E-value=0.0093  Score=35.96  Aligned_cols=28  Identities=25%  Similarity=0.500  Sum_probs=23.7

Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898           50 VRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus        50 ~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ..+..|++.-++++|+.   +++|+|++++|
T Consensus       148 l~lT~Q~I~lvA~Lh~~---GlVHgdi~~~n  175 (288)
T PF14531_consen  148 LSLTVQMIRLVANLHSY---GLVHGDIKPEN  175 (288)
T ss_dssp             HHHHHHHHHHHHHHHHT---TEEEST-SGGG
T ss_pred             HHHHHHHHHHHHHHhhc---ceEecccceee
Confidence            34457888999999999   99999999999

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=95.96  E-value=0.0082  Score=35.84  Aligned_cols=35  Identities=14%  Similarity=0.098  Sum_probs=29.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCc
Q 047898           44 LDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI   81 (111)
Q Consensus        44 l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~ni   81 (111)
                      .+......++.++...+.-||..   +++|+|+.+.||
T Consensus       135 ~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~Ni  169 (268)
T PRK15123        135 PDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHF  169 (268)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhE
Confidence            34455667888899999999999   999999999995

>cd05151 ChoK Choline Kinase (ChoK)

Probab=95.80  E-value=0.015  Score=31.72  Aligned_cols=38  Identities=16%  Similarity=0.196  Sum_probs=27.9

Q ss_pred             HHHHHHHHHHHHhhhcC--CCCeeecCCCCCCc---------CCCcccc
Q 047898           51 RIVVDALRGLEYLHEKV--QPSIIQRDIRSSNI---------ADFNLSN   88 (111)
Q Consensus        51 ~~~~~i~~~l~~lh~~~--~~~i~h~~l~~~ni---------~~~g~~~   88 (111)
                      ....++..++..+|+..  +..++|+|+++.|+         .||+.+.
T Consensus        87 ~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~~~~~~liDf~~a~  135 (170)
T cd05151          87 ENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLDDGRLWLIDWEYAG  135 (170)
T ss_pred             HHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEECCeEEEEeccccc
Confidence            34567888999999982  11359999999993         6776654

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=95.41  E-value=0.03  Score=32.01  Aligned_cols=35  Identities=31%  Similarity=0.389  Sum_probs=29.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCc
Q 047898           44 LDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI   81 (111)
Q Consensus        44 l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~ni   81 (111)
                      .+......++.++...+.-||..   +++|+|+.+.||
T Consensus       115 ~~~~~~~~ll~~l~~~i~~lH~~---gi~H~Dl~~~NI  149 (206)
T PF06293_consen  115 LDPSQRRELLRALARLIAKLHDA---GIYHGDLNPSNI  149 (206)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHC---cCCCCCCCcccE
Confidence            34455677888899999999999   999999999994

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=95.34  E-value=0.02  Score=36.57  Aligned_cols=37  Identities=19%  Similarity=0.342  Sum_probs=26.6

Q ss_pred             HHHHHHH-HHHHhhhcCCCCeeecCCCCCCc----------CCCcccccCC
Q 047898           52 IVVDALR-GLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAP   91 (111)
Q Consensus        52 ~~~~i~~-~l~~lh~~~~~~i~h~~l~~~ni----------~~~g~~~~~~   91 (111)
                      ++..++. .+..+|..   +++|+|++|.|+          .|||.+..+.
T Consensus       261 ia~~~~~~~l~ql~~~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~  308 (437)
T TIGR01982       261 LAENLARSFLNQVLRD---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLS  308 (437)
T ss_pred             HHHHHHHHHHHHHHhC---CceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence            3333333 35667888   999999999993          7888876654

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=94.51  E-value=0.16  Score=28.80  Aligned_cols=73  Identities=19%  Similarity=0.143  Sum_probs=46.9

Q ss_pred             ccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            4 ENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         4 ~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      +++.+++|+|-+    ..+.++...+...............+|.++..++.+++..+.+++......+.-.|++++|
T Consensus        20 ~~~pk~lG~CG~----~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~n   92 (188)
T PF12260_consen   20 EPFPKLLGSCGR----FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFFYLCDVSPDN   92 (188)
T ss_pred             CCCCCeeeECCC----EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecchHH
Confidence            478899999953    4444554433222111111111226899999999999999999987544356677888888

Proteins in this uncharacterised family are described as transmembrane proteins.

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=94.40  E-value=0.11  Score=29.42  Aligned_cols=39  Identities=23%  Similarity=0.399  Sum_probs=25.5

Q ss_pred             HHHHHHHHHHHHHH-hhhcCCCCeeecCCCCCC---------cCCCcccccC
Q 047898           49 RVRIVVDALRGLEY-LHEKVQPSIIQRDIRSSN---------IADFNLSNQA   90 (111)
Q Consensus        49 ~~~~~~~i~~~l~~-lh~~~~~~i~h~~l~~~n---------i~~~g~~~~~   90 (111)
                      ...++.+++..+.. +|..   +++|+|+++.|         +.|||.+...
T Consensus       108 ~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~~~~iIDf~qav~~  156 (188)
T PF01163_consen  108 PKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDGKVYIIDFGQAVDS  156 (188)
T ss_dssp             HHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETTCEEE--GTTEEET
T ss_pred             HHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecceEEEEecCcceec
Confidence            44555666665554 5788   99999999999         4788876543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=94.27  E-value=0.039  Score=36.06  Aligned_cols=35  Identities=29%  Similarity=0.334  Sum_probs=30.3

Q ss_pred             CCHHHHHHHHHHHHH----HHHHhhhcCCCCeeecCCCCCCc
Q 047898           44 LDWMTRVRIVVDALR----GLEYLHEKVQPSIIQRDIRSSNI   81 (111)
Q Consensus        44 l~~~~~~~~~~~i~~----~l~~lh~~~~~~i~h~~l~~~ni   81 (111)
                      ++....+....+...    |+.++|+.   .++|.+++++|+
T Consensus       215 ~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i  253 (524)
T KOG0601|consen  215 LPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANI  253 (524)
T ss_pred             CCchhhhhHHhhhhhcccccccccCCC---cccccccchhhe
Confidence            666777777778888    99999999   999999999994

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=92.51  E-value=0.037  Score=36.13  Aligned_cols=36  Identities=33%  Similarity=0.552  Sum_probs=31.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCc
Q 047898           43 VLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI   81 (111)
Q Consensus        43 ~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~ni   81 (111)
                      .++....+.+..|++.++.++|+.   .++|+|+++.||
T Consensus       362 ~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni  397 (524)
T KOG0601|consen  362 MLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNI  397 (524)
T ss_pred             hcCcchhhhhHHHHHhccccccch---hhhcccccccce
Confidence            366677788889999999999998   999999999995

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=89.42  E-value=0.44  Score=27.39  Aligned_cols=72  Identities=14%  Similarity=0.098  Sum_probs=42.3

Q ss_pred             CccceeeeeeeeeCCccchhhhhhhhhhc--ccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            3 HENLVELLGYCVEGNLRDELIWIIHVITC--KKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         3 h~~iv~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      +..|.+++|+.+++.....+++.+...++  ...+........++. ....   .+-.-..++-+.   +|+.+|+++.|
T Consensus        76 ~~~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~~~~-~~~~---~L~~f~~~l~~~---~Iv~~dl~~~N  148 (199)
T PF10707_consen   76 WSHIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKEGGLTE-ELRQ---ALDEFKRYLLDH---HIVIRDLNPHN  148 (199)
T ss_pred             ccccccEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHcCCccH-HHHH---HHHHHHHHHHHc---CCeecCCCccc
Confidence            56788999999987777777766653321  112211112222333 2222   222234677777   99999999999


Q ss_pred             c
Q 047898           81 I   81 (111)
Q Consensus        81 i   81 (111)
                      |
T Consensus       149 I  149 (199)
T PF10707_consen  149 I  149 (199)
T ss_pred             E
Confidence            5

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PRK09902 hypothetical protein; Provisional

Probab=87.81  E-value=1.1  Score=26.17  Aligned_cols=35  Identities=9%  Similarity=-0.012  Sum_probs=29.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCc
Q 047898           44 LDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI   81 (111)
Q Consensus        44 l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~ni   81 (111)
                      .+..+...++.++...+.-||+.   ++.|+|+-+.||
T Consensus       125 ~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khI  159 (216)
T PRK09902        125 YSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHI  159 (216)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhhe
Confidence            45556677888999999999999   999999998886

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=87.01  E-value=0.89  Score=26.79  Aligned_cols=26  Identities=15%  Similarity=0.331  Sum_probs=21.9

Q ss_pred             HHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898           52 IVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus        52 ~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      +...+..++.-+|..   ++.|+|..|.|
T Consensus       140 ~~~ki~~~ikqlH~~---G~~HGD~hpgN  165 (229)
T PF06176_consen  140 LAEKIVEAIKQLHKH---GFYHGDPHPGN  165 (229)
T ss_pred             HHHHHHHHHHHHHHc---CCccCCCCcCc
Confidence            334566778999999   99999999999

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=85.61  E-value=1.4  Score=25.59  Aligned_cols=33  Identities=36%  Similarity=0.654  Sum_probs=26.4

Q ss_pred             HHHHHHHHHHHHhhhcCCCCeeecCCCCCC-----cCCCcc
Q 047898           51 RIVVDALRGLEYLHEKVQPSIIQRDIRSSN-----IADFNL   86 (111)
Q Consensus        51 ~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-----i~~~g~   86 (111)
                      .-+.++.+-+..+|..   +|+-+|+++.|     +.|||.
T Consensus       168 ~~~~~~~~dl~~~~k~---gI~~~Dv~~~ny~~G~lvDfs~  205 (207)
T PF13095_consen  168 RDIPQMLRDLKILHKL---GIVPRDVKPRNYRGGKLVDFSS  205 (207)
T ss_pred             hHHHHHHHHHHHHHHC---CeeeccCccccccCCEEEeccc
Confidence            3446677778899999   99999999999     567764

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=84.35  E-value=1.4  Score=30.35  Aligned_cols=54  Identities=26%  Similarity=0.334  Sum_probs=31.6

Q ss_pred             HHHHHHHHHHHhhhcCCCCeeecC--CCCCC---cCCCcccccCCCCcccccccccCccccccCC
Q 047898           52 IVVDALRGLEYLHEKVQPSIIQRD--IRSSN---IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        52 ~~~~i~~~l~~lh~~~~~~i~h~~--l~~~n---i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      ....-+.++.++|+.   .=+|+|  +..++   ..++++...+.....   ..+..+++.|+||
T Consensus       341 ~~r~et~~l~~l~~~---~~~~~d~~l~s~~~~~~~~~~v~~~L~~~~~---~~t~~~~~~~~~p  399 (829)
T KOG0576|consen  341 PLRKETRPLAELHSS---YKVHRDNILGSEEEVKLLDFAVPPQLTRTMK---PRTAIGTPEPLAP  399 (829)
T ss_pred             hhhhhcccccccccc---cccCcccccccccccccccccCCcccCcccc---cccCCCCCCCCCc
Confidence            344456678888876   335664  22222   356777665544432   3456677888876

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=81.49  E-value=0.69  Score=30.79  Aligned_cols=21  Identities=24%  Similarity=0.501  Sum_probs=16.8

Q ss_pred             CeeecCCCCCCc--------------CCCcccccC
Q 047898           70 SIIQRDIRSSNI--------------ADFNLSNQA   90 (111)
Q Consensus        70 ~i~h~~l~~~ni--------------~~~g~~~~~   90 (111)
                      +++|+|++|.||              .|||+...+
T Consensus       280 GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l  314 (537)
T PRK04750        280 GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSL  314 (537)
T ss_pred             CeeeCCCChHHeEEecCCCCCCeEEEEecceEEEC
Confidence            999999999994              577766554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	111
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		9e-11
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		1e-10
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		2e-10
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		3e-10
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		7e-09
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		1e-08
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		3e-08
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		5e-08
3q4t_A	322	Crystal Structure Of Activin Receptor Type-Iia (Acv		5e-08
2qlu_A	314	Crystal Structure Of Activin Receptor Type Ii Kinas		1e-05
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		2e-05
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		2e-05
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		7e-05
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		2e-04

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 62.0 bits (149), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 31/129 (24%)
Query: 2   KHENLVELLGYCVEGNLRDELIWI---------IHVITCKKGVQGAQPSPVLDWMTRVRI 52
           +HENLVELLG+  +G   D+L  +         +  ++C  G      +P L W  R +I
Sbjct: 79  QHENLVELLGFSSDG---DDLCLVYVYXPNGSLLDRLSCLDG------TPPLSWHXRCKI 129
Query: 53  VVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRV 102
              A  G+ +LHE      I RDI+S+NI          +DF L+  +   A  +  +R+
Sbjct: 130 AQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRI 186
Query: 103 LGTFSYHAP 111
           +GT +Y AP
Sbjct: 187 VGTTAYXAP 195

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 31/129 (24%)
Query: 2   KHENLVELLGYCVEGNLRDELIWI---------IHVITCKKGVQGAQPSPVLDWMTRVRI 52
           +HENLVELLG+  +G   D+L  +         +  ++C  G      +P L W  R +I
Sbjct: 88  QHENLVELLGFSSDG---DDLCLVYVYMPNGSLLDRLSCLDG------TPPLSWHMRCKI 138
Query: 53  VVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRV 102
              A  G+ +LHE      I RDI+S+NI          +DF L+  +   A  +  +R+
Sbjct: 139 AQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRI 195
Query: 103 LGTFSYHAP 111
           +GT +Y AP
Sbjct: 196 VGTTAYMAP 204

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 31/129 (24%)
Query: 2   KHENLVELLGYCVEGNLRDELIWI---------IHVITCKKGVQGAQPSPVLDWMTRVRI 52
           +HENLVELLG+  +G   D+L  +         +  ++C  G      +P L W  R +I
Sbjct: 88  QHENLVELLGFSSDG---DDLCLVYVYMPNGSLLDRLSCLDG------TPPLSWHMRCKI 138
Query: 53  VVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRV 102
              A  G+ +LHE      I RDI+S+NI          +DF L+  +   A  +   R+
Sbjct: 139 AQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRI 195
Query: 103 LGTFSYHAP 111
           +GT +Y AP
Sbjct: 196 VGTTAYMAP 204

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 31/129 (24%)
Query: 2   KHENLVELLGYCVEGNLRDELIWI---------IHVITCKKGVQGAQPSPVLDWMTRVRI 52
           +HENLVELLG+  +G   D+L  +         +  ++C  G      +P L W  R +I
Sbjct: 82  QHENLVELLGFSSDG---DDLCLVYVYMPNGSLLDRLSCLDG------TPPLSWHMRCKI 132
Query: 53  VVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRV 102
              A  G+ +LHE      I RDI+S+NI          +DF L+  +   A  +   R+
Sbjct: 133 AQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRI 189
Query: 103 LGTFSYHAP 111
           +GT +Y AP
Sbjct: 190 VGTTAYMAP 198

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 20/124 (16%)
Query: 2   KHENLVELLGYCVEGNLRDELIWIIHVI---TCKKGVQGAQ-PSPVLDWMTRVRIVVDAL 57
           +H +LV L+G+C E   R+E+I I   +     K+ + G+  P+  + W  R+ I + A 
Sbjct: 93  RHPHLVSLIGFCDE---RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAA 149
Query: 58  RGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFS 107
           RGL YLH +   +II RD++S N          I DF +S +   +        V GT  
Sbjct: 150 RGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLG 206
Query: 108 YHAP 111
           Y  P
Sbjct: 207 YIDP 210

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 20/124 (16%)
Query: 2   KHENLVELLGYCVEGNLRDELIWIIHVI---TCKKGVQGAQ-PSPVLDWMTRVRIVVDAL 57
           +H +LV L+G+C E   R+E+I I   +     K+ + G+  P+  + W  R+ I + A 
Sbjct: 93  RHPHLVSLIGFCDE---RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAA 149
Query: 58  RGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFS 107
           RGL YLH +   +II RD++S N          I DF +S +   +        V GT  
Sbjct: 150 RGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLG 206
Query: 108 YHAP 111
           Y  P
Sbjct: 207 YIDP 210

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 3   HENLVELLGYCVEGNLRDELIWII----HVITCKKGVQGAQPSPVLDWMTRVRIVVDALR 58
           H NL+ L G+C+    R  L++       V +C +    +QP   LDW  R RI + + R
Sbjct: 94  HRNLLRLRGFCMTPTER-LLVYPYMANGSVASCLRERPESQPP--LDWPKRQRIALGSAR 150
Query: 59  GLEYLHEKVQPSIIQRDIRSSNI 81
           GL YLH+   P II RD++++NI
Sbjct: 151 GLAYLHDHCDPKIIHRDVKAANI 173

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 3   HENLVELLGYCVEGNLRDELIWII----HVITCKKGVQGAQPSPVLDWMTRVRIVVDALR 58
           H NL+ L G+C+    R  L++       V +C +  +  +  P LDW  R RI + + R
Sbjct: 86  HRNLLRLRGFCMTPTER-LLVYPYMANGSVASCLR--ERPESQPPLDWPKRQRIALGSAR 142
Query: 59  GLEYLHEKVQPSIIQRDIRSSNI 81
           GL YLH+   P II RD++++NI
Sbjct: 143 GLAYLHDHCDPKIIHRDVKAANI 165

>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 57/130 (43%), Gaps = 21/130 (16%)
Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGL 60
           +KHEN+++ +G    G   D  +W+I     K  +     + V+ W     I     RGL
Sbjct: 75  MKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGL 134
Query: 61  EYLHEKV-------QPSIIQRDIRSSN----------IADFNLS--NQAPNMAARLHSTR 101
            YLHE +       +P+I  RDI+S N          IADF L+   +A   A   H   
Sbjct: 135 AYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQ- 193
Query: 102 VLGTFSYHAP 111
            +GT  Y AP
Sbjct: 194 -VGTRRYMAP 202

>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 18/129 (13%)
Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGL 60
           +KHENL++ +     G+  +  +W+I     K  +       ++ W     +     RGL
Sbjct: 66  MKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGNIITWNELCHVAETMSRGL 125
Query: 61  EYLHEKV--------QPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRV 102
            YLHE V        +PSI  RD +S N+          ADF L+ +         +   
Sbjct: 126 SYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQ 185
Query: 103 LGTFSYHAP 111
           +GT  Y AP
Sbjct: 186 VGTRRYMAP 194

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 35/131 (26%)
Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCK----KGVQGAQPSPVLDWMTRVRIVVDA 56
           L H N+V+L G      + +    ++  + C     + +  A P   + W  ++R+++D 
Sbjct: 80  LNHPNIVKLYGL-----MHNPPRMVMEFVPCGDLYHRLLDKAHP---IKWSVKLRLMLDI 131
Query: 57  LRGLEYLHEKVQPSIIQRDIRSSNI---------------ADFNLSNQAPNMAARLHS-T 100
             G+EY+  +  P I+ RD+RS NI               ADF+LS Q+      +HS +
Sbjct: 132 ALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQS------VHSVS 184
Query: 101 RVLGTFSYHAP 111
            +LG F + AP
Sbjct: 185 GLLGNFQWMAP 195

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 35/131 (26%)
Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCK----KGVQGAQPSPVLDWMTRVRIVVDA 56
           L H N+V+L G      + +    ++  + C     + +  A P   + W  ++R+++D 
Sbjct: 80  LNHPNIVKLYGL-----MHNPPRMVMEFVPCGDLYHRLLDKAHP---IKWSVKLRLMLDI 131
Query: 57  LRGLEYLHEKVQPSIIQRDIRSSNI---------------ADFNLSNQAPNMAARLHS-T 100
             G+EY+  +  P I+ RD+RS NI               ADF LS Q+      +HS +
Sbjct: 132 ALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS------VHSVS 184
Query: 101 RVLGTFSYHAP 111
            +LG F + AP
Sbjct: 185 GLLGNFQWMAP 195

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 23/125 (18%)
Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCK----KGVQGAQPSPVLDWMTRVRIVVDA 56
           L H N+V+L G      + +    ++  + C     + +  A P   + W  ++R+++D 
Sbjct: 80  LNHPNIVKLYGL-----MHNPPRMVMEFVPCGDLYHRLLDKAHP---IKWSVKLRLMLDI 131
Query: 57  LRGLEYLHEKVQPSIIQRDIRSSNIADFNLSNQAPNMAA---------RLHS-TRVLGTF 106
             G+EY+  +  P I+ RD+RS NI   +L   AP  A           +HS + +LG F
Sbjct: 132 ALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNF 190
Query: 107 SYHAP 111
            + AP
Sbjct: 191 QWMAP 195

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 17/121 (14%)
Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGL 60
           L H N+V+L+    + N  D L  +  ++     ++     P+ +   R     D ++G+
Sbjct: 93  LDHPNVVKLVEVLDDPN-EDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQ-DLIKGI 150
Query: 61  EYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHA 110
           EYLH +    II RDI+ SN          IADF +SN+     A L +T  +GT ++ A
Sbjct: 151 EYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNT--VGTPAFMA 205
Query: 111 P 111
           P
Sbjct: 206 P 206

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	111
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	2e-28
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	2e-28
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	3e-28
3soc_A	322	Activin receptor type-2A; structural genomics cons	6e-21
3q4u_A	301	Activin receptor type-1; structural genomics conso	8e-17
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	2e-16
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	2e-16
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	3e-16
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	6e-16
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	2e-15
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	2e-15
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	4e-14
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-13
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	5e-13
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	6e-13
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	7e-12
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	1e-11
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	2e-11
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	1e-10
3fme_A	290	Dual specificity mitogen-activated protein kinase;	4e-08
3an0_A	340	Dual specificity mitogen-activated protein kinase;	7e-08
2dyl_A	318	Dual specificity mitogen-activated protein kinase	9e-08
3aln_A	327	Dual specificity mitogen-activated protein kinase;	9e-08
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-07
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	3e-07
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	3e-07
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	4e-07
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	4e-07
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	1e-06
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	1e-06
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-06
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	2e-06
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	2e-06
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	2e-06
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	4e-06
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	5e-06
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	6e-06
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	6e-06
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	9e-06
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	9e-06
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	1e-05
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	1e-05
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	1e-05
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	1e-05
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	2e-05
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	2e-05
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	3e-05
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	3e-05
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	4e-05
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	4e-05
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	4e-05
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	4e-05
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	5e-05
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	5e-05
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	7e-05
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	7e-05
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	8e-05
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	8e-05
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	9e-05
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	1e-04
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	1e-04
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	1e-04
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	2e-04
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	2e-04
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	2e-04
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-04
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	2e-04
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	5e-04
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	5e-04
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	6e-04
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	6e-04
3ork_A	311	Serine/threonine protein kinase; structural genomi	6e-04
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	7e-04
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	7e-04
3pls_A	298	Macrophage-stimulating protein receptor; protein k	8e-04
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	8e-04
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	8e-04
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	9e-04

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  103 bits (260), Expect = 2e-28
 Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 39/134 (29%)

Query: 1   LKHENLVELLGYCVEGN-------------LRDELIWIIHVITCKKGVQGAQPSPVLDWM 47
            +HENLVELLG+  +G+             L D L                  +P L W 
Sbjct: 87  CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS-------------CLDGTPPLSWH 133

Query: 48  TRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARL 97
            R +I   A  G+ +LHE      I RDI+S+NI          +DF L+  +   A  +
Sbjct: 134 MRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190

Query: 98  HSTRVLGTFSYHAP 111
            ++R++GT +Y AP
Sbjct: 191 MTSRIVGTTAYMAP 204

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  103 bits (260), Expect = 2e-28
 Identities = 40/137 (29%), Positives = 56/137 (40%), Gaps = 42/137 (30%)

Query: 1   LKHENLVELLGYCVEGNLR---------DELIWIIHVITCKKGVQGAQPSPVLDWMTRVR 51
             H NL+ L G+C+    R           +   +           +QP   LDW  R R
Sbjct: 84  AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR------ERPESQP--PLDWPKRQR 135

Query: 52  IVVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARL---- 97
           I + + RGL YLH+   P II RD++++NI           DF L        A+L    
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL--------AKLMDYK 187

Query: 98  --H-STRVLGTFSYHAP 111
             H +T V GT  + AP
Sbjct: 188 DTHVTTAVRGTIGHIAP 204

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  103 bits (259), Expect = 3e-28
 Identities = 40/135 (29%), Positives = 57/135 (42%), Gaps = 40/135 (29%)

Query: 1   LKHENLVELLGYCVE-------------GNLRDELIWIIHVITCKKGVQGAQPSPVLDWM 47
            +H +LV L+G+C E             GNL+  L    +            P+  + W 
Sbjct: 92  CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHL----Y--------GSDLPTMSMSWE 139

Query: 48  TRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARL 97
            R+ I + A RGL YLH     +II RD++S NI           DF +S +   +  + 
Sbjct: 140 QRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTEL-DQT 195

Query: 98  H-STRVLGTFSYHAP 111
           H ST V GT  Y  P
Sbjct: 196 HLSTVVKGTLGYIDP 210

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 84.0 bits (208), Expect = 6e-21
 Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 23/131 (17%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVIT--CKKG-VQGAQPSPVLDWMTRVRIVVDAL 57
           +KHEN+++ +G    G   D  +W+I   T   +KG +     + V+ W     I     
Sbjct: 75  MKHENILQFIGAEKRGTSVDVDLWLI---TAFHEKGSLSDFLKANVVSWNELCHIAETMA 131

Query: 58  RGLEYLHEKVQ-------PSIIQRDIRSSN----------IADFNLSNQAPNMAARLHST 100
           RGL YLHE +        P+I  RDI+S N          IADF L+ +     +   + 
Sbjct: 132 RGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTH 191

Query: 101 RVLGTFSYHAP 111
             +GT  Y AP
Sbjct: 192 GQVGTRRYMAP 202

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 72.4 bits (178), Expect = 8e-17
 Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 25/132 (18%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVIT--CKKG-VQGAQPSPVLDWMTRVRIVVDAL 57
           L+HEN++  +   +        +W+I   T   + G +        LD ++ +RIV+   
Sbjct: 59  LRHENILGFIASDMTSRHSSTQLWLI---THYHEMGSLYDYLQLTTLDTVSCLRIVLSIA 115

Query: 58  RGLEYLHEKV-----QPSIIQRDIRSSN----------IADFNLS---NQAPNMAARLHS 99
            GL +LH ++     +P+I  RD++S N          IAD  L+   +Q+ N     ++
Sbjct: 116 SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNN 175

Query: 100 TRVLGTFSYHAP 111
            RV GT  Y AP
Sbjct: 176 PRV-GTKRYMAP 186

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 72.2 bits (177), Expect = 2e-16
 Identities = 28/136 (20%), Positives = 50/136 (36%), Gaps = 27/136 (19%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVIT--CKKG-VQGAQPSPVLDWMTRVRIVVDAL 57
           ++H+N+   +           + +++  +      G +         DW++  R+     
Sbjct: 64  MEHDNIARFIVGDERVTADGRMEYLL--VMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVT 121

Query: 58  RGLEYLHEKV------QPSIIQRDIRSSN----------IADFNLS------NQAPNMAA 95
           RGL YLH ++      +P+I  RD+ S N          I+DF LS              
Sbjct: 122 RGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEE 181

Query: 96  RLHSTRVLGTFSYHAP 111
              +   +GT  Y AP
Sbjct: 182 DNAAISEVGTIRYMAP 197

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 71.2 bits (175), Expect = 2e-16
 Identities = 29/133 (21%), Positives = 50/133 (37%), Gaps = 40/133 (30%)

Query: 1   LKHENLVELLGYCVE-----------GNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTR 49
           + H N+V+L G C+            G+L +    ++H         GA+P P       
Sbjct: 58  VNHPNIVKLYGACLNPVCLVMEYAEGGSLYN----VLH---------GAEPLPYYTAAHA 104

Query: 50  VRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-----------IADFNLSNQAPNMAARLH 98
           +   +   +G+ YLH     ++I RD++  N           I DF  +          H
Sbjct: 105 MSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT-----H 159

Query: 99  STRVLGTFSYHAP 111
            T   G+ ++ AP
Sbjct: 160 MTNNKGSAAWMAP 172

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 71.3 bits (175), Expect = 3e-16
 Identities = 28/131 (21%), Positives = 57/131 (43%), Gaps = 23/131 (17%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVIT--CKKG-VQGAQPSPVLDWMTRVRIVVDAL 57
           ++HEN++  +   ++G      +++I   T   + G +     S  LD  + +++   ++
Sbjct: 88  MRHENILGFIAADIKGTGSWTQLYLI---TDYHENGSLYDYLKSTTLDAKSMLKLAYSSV 144

Query: 58  RGLEYLHEKV-----QPSIIQRDIRSSN----------IADFNLS--NQAPNMAARLHST 100
            GL +LH ++     +P+I  RD++S N          IAD  L+    +      +   
Sbjct: 145 SGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPN 204

Query: 101 RVLGTFSYHAP 111
             +GT  Y  P
Sbjct: 205 TRVGTKRYMPP 215

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 69.4 bits (170), Expect = 2e-15
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 25/132 (18%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVIT--CKKG-VQGAQPSPVLDWMTRVRIVVDAL 57
           L+HEN++  +    + N     +W++   +   + G +        +     +++ +   
Sbjct: 93  LRHENILGFIAADNKDNGTWTQLWLV---SDYHEHGSLFDYLNRYTVTVEGMIKLALSTA 149

Query: 58  RGLEYLHEKVQ-----PSIIQRDIRSSN----------IADFNLS---NQAPNMAARLHS 99
            GL +LH ++      P+I  RD++S N          IAD  L+   + A +      +
Sbjct: 150 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPN 209

Query: 100 TRVLGTFSYHAP 111
            RV GT  Y AP
Sbjct: 210 HRV-GTKRYMAP 220

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 68.5 bits (168), Expect = 2e-15
 Identities = 32/137 (23%), Positives = 54/137 (39%), Gaps = 47/137 (34%)

Query: 1   LKHENLVELLGYCVE-----------GNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTR 49
           L H N+V+L G               G+L       +              +  + W  +
Sbjct: 80  LNHPNIVKLYGLMHNPPRMVMEFVPCGDLYH----RLL-----------DKAHPIKWSVK 124

Query: 50  VRIVVDALRGLEYLHEKVQPSIIQRDIRSSN---------------IADFNLSNQAPNMA 94
           +R+++D   G+EY+  +  P I+ RD+RS N               +ADF LS Q+ +  
Sbjct: 125 LRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHS- 182

Query: 95  ARLHSTRVLGTFSYHAP 111
                + +LG F + AP
Sbjct: 183 ----VSGLLGNFQWMAP 195

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 65.4 bits (160), Expect = 4e-14
 Identities = 31/134 (23%), Positives = 51/134 (38%), Gaps = 39/134 (29%)

Query: 1   LKHENLVELLG-------------YCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWM 47
           L+H N+V  +G             Y   G+L      ++H    ++          LD  
Sbjct: 91  LRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYR----LLHKSGARE---------QLDER 137

Query: 48  TRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARL 97
            R+ +  D  +G+ YLH +  P I+ R+++S N          + DF LS    +     
Sbjct: 138 RRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSS 196

Query: 98  HSTRVLGTFSYHAP 111
            S    GT  + AP
Sbjct: 197 KSAA--GTPEWMAP 208

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 63.0 bits (154), Expect = 2e-13
 Identities = 22/136 (16%), Positives = 46/136 (33%), Gaps = 47/136 (34%)

Query: 1   LKHENLVELLG---------------YCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLD 45
             H N++ +LG               +   G+L +    ++H             + V+D
Sbjct: 64  FSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYN----VLH----------EGTNFVVD 109

Query: 46  WMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAA 95
               V+  +D  RG+ +LH   +P I +  + S +          I+  ++         
Sbjct: 110 QSQAVKFALDMARGMAFLHTL-EPLIPRHALNSRSVMIDEDMTARISMADVKFS------ 162

Query: 96  RLHSTRVLGTFSYHAP 111
              S   +   ++ AP
Sbjct: 163 -FQSPGRMYAPAWVAP 177

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 62.4 bits (152), Expect = 5e-13
 Identities = 26/136 (19%), Positives = 42/136 (30%), Gaps = 43/136 (31%)

Query: 1   LKHENLVELLGYCVE-------------GNLRDELIWIIHVITCKKGVQGAQPSPVLDWM 47
            +HEN+V  +G C+                L      ++                VLD  
Sbjct: 86  TRHENVVLFMGACMSPPHLAIITSLCKGRTLYS----VVRD-----------AKIVLDVN 130

Query: 48  TRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN---------IADFNLS---NQAPNMAA 95
              +I  + ++G+ YLH      I+ +D++S N         I DF L            
Sbjct: 131 KTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYDNGKVVITDFGLFSISGVLQAGRR 187

Query: 96  RLHSTRVLGTFSYHAP 111
                   G   + AP
Sbjct: 188 EDKLRIQNGWLCHLAP 203

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 61.9 bits (151), Expect = 6e-13
 Identities = 27/133 (20%), Positives = 48/133 (36%), Gaps = 40/133 (30%)

Query: 1   LKHENLVELLG------------YCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMT 48
            +H N++  +G            +C   +L       +H                 +   
Sbjct: 77  TRHVNILLFMGYSTAPQLAIVTQWCEGSSLYH----HLHA-----------SETKFEMKK 121

Query: 49  RVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLH 98
            + I     RG++YLH K   SII RD++S+N          I DF L+ +    +    
Sbjct: 122 LIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQ 178

Query: 99  STRVLGTFSYHAP 111
             ++ G+  + AP
Sbjct: 179 FEQLSGSILWMAP 191

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 58.8 bits (143), Expect = 7e-12
 Identities = 30/142 (21%), Positives = 45/142 (31%), Gaps = 52/142 (36%)

Query: 1   LKHENLVELLG-------------YCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWM 47
           LKH N++ L G             +   G L      ++                 +   
Sbjct: 63  LKHPNIIALRGVCLKEPNLCLVMEFARGGPLNR----VLS-------------GKRIPPD 105

Query: 48  TRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN------------------IADFNLSNQ 89
             V   V   RG+ YLH++    II RD++SSN                  I DF L+  
Sbjct: 106 ILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA-- 163

Query: 90  APNMAARLHSTRVLGTFSYHAP 111
                 R       G +++ AP
Sbjct: 164 --REWHRTTKMSAAGAYAWMAP 183

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 57.3 bits (139), Expect = 2e-11
 Identities = 32/146 (21%), Positives = 47/146 (32%), Gaps = 53/146 (36%)

Query: 1   LKHENLVELLGYCVE-------------GNLRDELIWIIHVITCKKGVQGAQPSPVLDWM 47
           L+H N+++ +G   +             G LR     II                   W 
Sbjct: 64  LEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRG----IIK-----------SMDSQYPWS 108

Query: 48  TRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLS---------- 87
            RV    D   G+ YLH     +II RD+ S N          +ADF L+          
Sbjct: 109 QRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165

Query: 88  --NQAPNMAARLHSTRVLGTFSYHAP 111
              ++     R     V+G   + AP
Sbjct: 166 EGLRSLKKPDRKKRYTVVGNPYWMAP 191

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 55.8 bits (135), Expect = 1e-10
 Identities = 27/126 (21%), Positives = 47/126 (37%), Gaps = 23/126 (18%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVI----TCKKGVQGAQPSPVLDWMTRVRIVVDA 56
           L+H N+V             + I ++  +    T K  ++  +    +            
Sbjct: 82  LQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKV---MKIKVLRSWCRQI 138

Query: 57  LRGLEYLHEKVQPSIIQRDIRSSNI-----------ADFNLSNQAPNMAARLHSTRVLGT 105
           L+GL++LH +  P II RD++  NI            D  L+       A+     V+GT
Sbjct: 139 LKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK----AVIGT 193

Query: 106 FSYHAP 111
             + AP
Sbjct: 194 PEFMAP 199

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 48.4 bits (116), Expect = 4e-08
 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 15/71 (21%)

Query: 51  RIVVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHST 100
           +I V  ++ LE+LH K+   +I RD++ SN+           DF +S    +  A+    
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAK---D 167

Query: 101 RVLGTFSYHAP 111
              G   Y AP
Sbjct: 168 IDAGCKPYMAP 178

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 47.4 bits (113), Expect = 9e-08
 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 15/71 (21%)

Query: 51  RIVVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHST 100
           ++ V  ++ L YL EK    +I RD++ SNI           DF +S +  +  A+    
Sbjct: 128 KMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK---D 182

Query: 101 RVLGTFSYHAP 111
           R  G  +Y AP
Sbjct: 183 RSAGCAAYMAP 193

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 47.3 bits (113), Expect = 9e-08
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 15/71 (21%)

Query: 51  RIVVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHST 100
           +I +  ++ L +L E ++  II RDI+ SNI           DF +S Q  +  A+   T
Sbjct: 129 KITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK---T 183

Query: 101 RVLGTFSYHAP 111
           R  G   Y AP
Sbjct: 184 RDAGCRPYMAP 194

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 46.5 bits (111), Expect = 2e-07
 Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 29/104 (27%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVIT--CKKG-----VQGAQPSPVLDWMTRVRIV 53
             H N+V L+G C +     + I+I   +    + G     ++       +   T +++V
Sbjct: 169 YSHPNIVRLIGVCTQK----QPIYI---VMELVQGGDFLTFLRTEGARLRVK--TLLQMV 219

Query: 54  VDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLS 87
            DA  G+EYL  K     I RD+ + N          I+DF +S
Sbjct: 220 GDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMS 260

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 46.1 bits (110), Expect = 3e-07
 Identities = 32/132 (24%), Positives = 48/132 (36%), Gaps = 36/132 (27%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWII----------HVITCKKGVQGAQPSPVLDWMTRV 50
           LKH+N+V+ LG   E    +  I I            ++  K G     P    +     
Sbjct: 76  LKHKNIVQYLGSFSE----NGFIKIFMEQVPGGSLSALLRSKWG-----PLKDNEQTIGF 126

Query: 51  RIVVDALRGLEYLHEKVQPSIIQRDIRSSNI-----------ADFNLSNQAPNMAARLHS 99
                 L GL+YLH+     I+ RDI+  N+           +DF  S +   +     +
Sbjct: 127 -YTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET 182

Query: 100 TRVLGTFSYHAP 111
               GT  Y AP
Sbjct: 183 --FTGTLQYMAP 192

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 46.3 bits (110), Expect = 3e-07
 Identities = 29/134 (21%), Positives = 47/134 (35%), Gaps = 38/134 (28%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWI---------IHVITCKKGVQGAQPSPVLDWMTRVR 51
           L    +V L G   EG      + I         +  +  K+   G  P     +     
Sbjct: 107 LSSPRIVPLYGAVREG----PWVNIFMELLEGGSLGQL-IKQM--GCLPEDRALYYLG-- 157

Query: 52  IVVDALRGLEYLHEKVQPSIIQRDIRSSNI-----------ADFNLSNQ-APNMAARLHS 99
               AL GLEYLH +    I+  D+++ N+            DF  +    P+   +   
Sbjct: 158 ---QALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLL 211

Query: 100 TR--VLGTFSYHAP 111
           T   + GT ++ AP
Sbjct: 212 TGDYIPGTETHMAP 225

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 46.0 bits (109), Expect = 4e-07
 Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 16/71 (22%)

Query: 51  RIVVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHST 100
           ++ +  ++GL YL EK +  I+ RD++ SNI           DF +S Q   +   + ++
Sbjct: 135 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQ---LIDSMANS 189

Query: 101 RVLGTFSYHAP 111
            V GT SY +P
Sbjct: 190 FV-GTRSYMSP 199

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 45.9 bits (109), Expect = 4e-07
 Identities = 21/134 (15%), Positives = 42/134 (31%), Gaps = 37/134 (27%)

Query: 1   LKHENLVELLG-------------YCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWM 47
           +K+E  +   G             Y    ++                V     +  +   
Sbjct: 100 IKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDE--------YFFVLDKNYTCFIPIQ 151

Query: 48  TRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARL 97
               I+   L    Y+H   + +I  RD++ SN          ++DF  S    +   ++
Sbjct: 152 VIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVD--KKI 207

Query: 98  HSTRVLGTFSYHAP 111
             +R  GT+ +  P
Sbjct: 208 KGSR--GTYEFMPP 219

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 44.6 bits (106), Expect = 1e-06
 Identities = 24/132 (18%), Positives = 47/132 (35%), Gaps = 36/132 (27%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWII-----------HVITCKKGVQGAQPSPVLDWMTR 49
           L H N+++     +E N     + I+            +   KK  +      V  +  +
Sbjct: 89  LNHPNVIKYYASFIEDNE----LNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQ 144

Query: 50  VRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHS 99
           +         LE++H +    ++ RDI+ +N+           D  L     +     HS
Sbjct: 145 L------CSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS 195

Query: 100 TRVLGTFSYHAP 111
             ++GT  Y +P
Sbjct: 196 --LVGTPYYMSP 205

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 44.3 bits (105), Expect = 1e-06
 Identities = 28/131 (21%), Positives = 51/131 (38%), Gaps = 36/131 (27%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWII----------HVITCKKGVQGAQPSPVLDWMTRV 50
           +KH N+V+      E       ++I+            I  +KG    Q   +LDW  ++
Sbjct: 80  MKHPNIVQYRESFEENGS----LYIVMDYCEGGDLFKRINAQKG-VLFQEDQILDWFVQI 134

Query: 51  RIVVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHST 100
                    L+++H++    I+ RDI+S NI           DF ++    +      + 
Sbjct: 135 ------CLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARA- 184

Query: 101 RVLGTFSYHAP 111
             +GT  Y +P
Sbjct: 185 -CIGTPYYLSP 194

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 44.2 bits (105), Expect = 1e-06
 Identities = 31/142 (21%), Positives = 47/142 (33%), Gaps = 43/142 (30%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVIT-----------CKKG-------VQGAQPSP 42
           L H N+V   G     +   E        +           C KG        +  +   
Sbjct: 61  LDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLD 120

Query: 43  ---VLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQ 89
               L+   ++       +G++Y+H K    +I RD++ SNI           DF L   
Sbjct: 121 KVLALELFEQI------TKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTS 171

Query: 90  APNMAARLHSTRVLGTFSYHAP 111
             N   R   TR  GT  Y +P
Sbjct: 172 LKNDGKR---TRSKGTLRYMSP 190

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 43.8 bits (104), Expect = 2e-06
 Identities = 27/138 (19%), Positives = 47/138 (34%), Gaps = 41/138 (29%)

Query: 1   LKHENLVELLG---------------YCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLD 45
           LKH N+V                   YC  G+L         +    K  Q      VL 
Sbjct: 62  LKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS------VITKGTKERQYLDEEFVLR 115

Query: 46  WMTRVRIVVDALRGLEYLHEK--VQPSIIQRDIRSSNI----------ADFNLSNQAPNM 93
            MT++         L+  H +     +++ RD++ +N+           DF L+    + 
Sbjct: 116 VMTQL------TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD 169

Query: 94  AARLHSTRVLGTFSYHAP 111
            +   +   +GT  Y +P
Sbjct: 170 TSFAKT--FVGTPYYMSP 185

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 43.5 bits (103), Expect = 2e-06
 Identities = 26/124 (20%), Positives = 45/124 (36%), Gaps = 38/124 (30%)

Query: 9   LLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQ 68
            +  C + NL+D        +  +  ++  + S  L    ++         +E+LH K  
Sbjct: 93  QMQLCRKENLKD-------WMNGRCTIEERERSVCLHIFLQI------AEAVEFLHSK-- 137

Query: 69  PSIIQRDIRSSNI----------ADFNLS-----------NQAPNMAARLHSTRVLGTFS 107
             ++ RD++ SNI           DF L               P  A   H+ +V GT  
Sbjct: 138 -GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQV-GTKL 195

Query: 108 YHAP 111
           Y +P
Sbjct: 196 YMSP 199

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 43.5 bits (103), Expect = 2e-06
 Identities = 30/110 (27%), Positives = 44/110 (40%), Gaps = 30/110 (27%)

Query: 1   LKHENLVELLG-YCVEGNLRDELIWII----------HVITCKKGVQGAQPSPVLDWMTR 49
             H N+V     + V+  L     W++           +I      +G   S VLD  T 
Sbjct: 70  CHHPNIVSYYTSFVVKDEL-----WLVMKLLSGGSVLDIIKHIVA-KGEHKSGVLDESTI 123

Query: 50  VRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQ 89
             I+ + L GLEYLH+      I RD+++ NI          ADF +S  
Sbjct: 124 ATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAF 170

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 42.7 bits (101), Expect = 4e-06
 Identities = 30/109 (27%), Positives = 39/109 (35%), Gaps = 26/109 (23%)

Query: 2   KHENLVELLG-------------YCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMT 48
           KH+N++ LLG             Y  +GNLR+ L                 P   L    
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192

Query: 49  RVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLS 87
            V       RG+EYL  K     I RD+ + N          IADF L+
Sbjct: 193 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLA 238

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 42.4 bits (100), Expect = 5e-06
 Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 35/107 (32%)

Query: 2   KHENLVELLG-YCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVR--------I 52
           +H N+VE+   Y V   L     W+  ++   +G  GA    + D +++VR        +
Sbjct: 100 QHFNVVEMYKSYLVGEEL-----WV--LMEFLQG--GA----LTDIVSQVRLNEEQIATV 146

Query: 53  VVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQ 89
               L+ L YLH +    +I RDI+S +I          +DF    Q
Sbjct: 147 CEAVLQALAYLHAQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQ 190

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 42.3 bits (100), Expect = 6e-06
 Identities = 28/109 (25%), Positives = 40/109 (36%), Gaps = 26/109 (23%)

Query: 2   KHENLVELLG-------------YCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMT 48
           KH+N++ LLG             Y  +GNLR+ L                 P   + +  
Sbjct: 99  KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158

Query: 49  RVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLS 87
            V       RG+EYL  +     I RD+ + N          IADF L+
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLA 204

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 42.3 bits (100), Expect = 6e-06
 Identities = 29/111 (26%), Positives = 42/111 (37%), Gaps = 39/111 (35%)

Query: 1   LKHENLVELLG-YCVEGNLRDELIWIIHVIT-CKKGVQGAQPSPVLDWMTRVR------- 51
             H  +V+LLG Y  +G L     WI  +I  C  G        V   M  +        
Sbjct: 73  CDHPYIVKLLGAYYHDGKL-----WI--MIEFCPGG-------AVDAIMLELDRGLTEPQ 118

Query: 52  ---IVVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQ 89
              +    L  L +LH K    II RD+++ N+          ADF +S +
Sbjct: 119 IQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAK 166

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 42.0 bits (99), Expect = 9e-06
 Identities = 28/109 (25%), Positives = 40/109 (36%), Gaps = 26/109 (23%)

Query: 2   KHENLVELLG-------------YCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMT 48
           KH+N++ LLG             Y  +GNLR+ L                 P   + +  
Sbjct: 145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204

Query: 49  RVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLS 87
            V       RG+EYL  +     I RD+ + N          IADF L+
Sbjct: 205 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLA 250

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 41.9 bits (99), Expect = 9e-06
 Identities = 26/108 (24%), Positives = 39/108 (36%), Gaps = 35/108 (32%)

Query: 1   LKHENLVELLG-YCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVR-------- 51
            K+ N+V  L  Y V   L     W++ +     G        + D +T           
Sbjct: 74  NKNPNIVNYLDSYLVGDEL-----WVV-MEYLAGG-------SLTDVVTETCMDEGQIAA 120

Query: 52  IVVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQ 89
           +  + L+ LE+LH      +I RDI+S NI           DF    Q
Sbjct: 121 VCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQ 165

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 41.6 bits (98), Expect = 1e-05
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 13/48 (27%)

Query: 52  IVVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQ 89
           I  + LRGL +LH+     +I RDI+  N+           DF +S Q
Sbjct: 134 ICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 178

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 41.6 bits (98), Expect = 1e-05
 Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 27/104 (25%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVIT--CKKG-----VQGAQPSPVLDWMTRVRIV 53
           L+H NLV+LLG  VE       ++I   +T    KG     ++    S  L     ++  
Sbjct: 243 LRHSNLVQLLGVIVEE---KGGLYI---VTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFS 295

Query: 54  VDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLS 87
           +D    +EYL      + + RD+ + N          ++DF L+
Sbjct: 296 LDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLT 336

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 41.4 bits (97), Expect = 1e-05
 Identities = 25/120 (20%), Positives = 42/120 (35%), Gaps = 36/120 (30%)

Query: 12  YCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSI 71
            C + NL+D   W+      +  ++  +    L    ++         +E+LH K    +
Sbjct: 142 LCRKENLKD---WMNR----RCSLEDREHGVCLHIFIQI------AEAVEFLHSK---GL 185

Query: 72  IQRDIRSSNI----------ADFNLS----------NQAPNMAARLHSTRVLGTFSYHAP 111
           + RD++ SNI           DF L                M A    T  +GT  Y +P
Sbjct: 186 MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSP 245

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 41.1 bits (97), Expect = 1e-05
 Identities = 24/110 (21%), Positives = 35/110 (31%), Gaps = 27/110 (24%)

Query: 2   KHENLVELLG--------------YCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWM 47
            H N+V LLG              +C  GNL   L    +     K          L   
Sbjct: 89  HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148

Query: 48  TRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLS 87
             +       +G+E+L  +     I RD+ + N          I DF L+
Sbjct: 149 HLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLA 195

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 40.8 bits (96), Expect = 2e-05
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 13/48 (27%)

Query: 52  IVVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQ 89
           I+   L+GLEYLH       I RDI++ NI          ADF ++ Q
Sbjct: 130 ILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQ 174

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 40.9 bits (96), Expect = 2e-05
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 13/48 (27%)

Query: 52  IVVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQ 89
           +   AL+GL YLH     ++I RD+++ NI           DF  ++ 
Sbjct: 159 VTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASI 203

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 40.7 bits (95), Expect = 3e-05
 Identities = 8/48 (16%), Positives = 19/48 (39%), Gaps = 13/48 (27%)

Query: 52  IVVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQ 89
           I+   L+ L+Y+H       + R +++S+I          +    +  
Sbjct: 133 ILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLS 177

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 40.5 bits (95), Expect = 3e-05
 Identities = 28/110 (25%), Positives = 43/110 (39%), Gaps = 40/110 (36%)

Query: 1   LKHENLVELLGYCVE-------------GNLRDELIWIIHVITCKKGVQGAQPSPVLDWM 47
           +KH NLV+LLG C               GNL D L         ++  +    + VL   
Sbjct: 273 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---------RECNRQEVSAVVL--- 320

Query: 48  TRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLS 87
             + +       +EYL +K   + I R++ + N          +ADF LS
Sbjct: 321 --LYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLS 365

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 40.0 bits (94), Expect = 4e-05
 Identities = 29/109 (26%), Positives = 39/109 (35%), Gaps = 26/109 (23%)

Query: 2   KHENLVELLG-------------YCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMT 48
            H N++ LLG             Y   GNL D L     + T          +  L    
Sbjct: 84  HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 143

Query: 49  RVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLS 87
            +    D  RG++YL +K     I RD+ + N          IADF LS
Sbjct: 144 LLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLS 189

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 40.0 bits (94), Expect = 4e-05
 Identities = 27/139 (19%), Positives = 41/139 (29%), Gaps = 37/139 (26%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWII-----------HVITCKKGVQGAQPSPVLDWMTR 49
             H N++ L+ YC+         W++            +   K          +L  +  
Sbjct: 83  FNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLL-- 140

Query: 50  VRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHS 99
               +   RGLE +H         RD++ +NI           D    NQA         
Sbjct: 141 ----LGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQ 193

Query: 100 TRVL-------GTFSYHAP 111
              L        T SY AP
Sbjct: 194 ALTLQDWAAQRCTISYRAP 212

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 39.7 bits (93), Expect = 4e-05
 Identities = 23/134 (17%), Positives = 42/134 (31%), Gaps = 42/134 (31%)

Query: 1   LKH--ENLVELLGY------------CVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDW 46
           L+   + ++ L  Y            C   +L   L         KK          +D 
Sbjct: 64  LQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWL--------KKKKS--------IDP 107

Query: 47  MTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI---------ADFNLSNQAPNMAARL 97
             R     + L  +  +H+     I+  D++ +N           DF ++NQ       +
Sbjct: 108 WERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSV 164

Query: 98  HSTRVLGTFSYHAP 111
                +GT +Y  P
Sbjct: 165 VKDSQVGTVNYMPP 178

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 39.8 bits (93), Expect = 4e-05
 Identities = 25/134 (18%), Positives = 46/134 (34%), Gaps = 38/134 (28%)

Query: 2   KHENLVELLGYCVEGNLRDELIWII--------HVITCKKGVQGAQPSPVLDWMTRVRIV 53
           +H N++    +C E +   +  +I              +K        P+        ++
Sbjct: 76  EHPNVIRY--FCTEKD--RQFQYIAIELCAATLQEYVEQKDFAHLGLEPI-------TLL 124

Query: 54  VDALRGLEYLHEKVQPSIIQRDIRSSNI---------------ADFNLSNQ-APNMAARL 97
                GL +LH     +I+ RD++  NI               +DF L  + A    +  
Sbjct: 125 QQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFS 181

Query: 98  HSTRVLGTFSYHAP 111
             + V GT  + AP
Sbjct: 182 RRSGVPGTEGWIAP 195

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 39.6 bits (93), Expect = 5e-05
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 13/48 (27%)

Query: 52  IVVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQ 89
           I+ + L+GL+YLH +     I RDI+++N+          ADF ++ Q
Sbjct: 124 ILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQ 168

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 39.8 bits (93), Expect = 5e-05
 Identities = 12/64 (18%), Positives = 24/64 (37%), Gaps = 12/64 (18%)

Query: 57  LRGLEYLHEKVQPSIIQRDIRSSNI---------ADFNLSNQAPNMAARLHSTRVLGTFS 107
           L  +  +H+     I+  D++ +N           DF ++NQ       +     +G  +
Sbjct: 165 LEAVHTIHQH---GIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVN 221

Query: 108 YHAP 111
           Y  P
Sbjct: 222 YMPP 225

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 39.2 bits (92), Expect = 7e-05
 Identities = 13/64 (20%), Positives = 25/64 (39%), Gaps = 12/64 (18%)

Query: 57  LRGLEYLHEKVQPSIIQRDIRSSNI---------ADFNLSNQAPNMAARLHSTRVLGTFS 107
           L  +  +H+     I+  D++ +N           DF ++NQ       +     +GT +
Sbjct: 137 LEAVHTIHQH---GIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVN 193

Query: 108 YHAP 111
           Y  P
Sbjct: 194 YMPP 197

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 39.1 bits (92), Expect = 7e-05
 Identities = 23/110 (20%), Positives = 36/110 (32%), Gaps = 26/110 (23%)

Query: 1   LKHENLVELLGYCVE-------------GNLRDELIWIIHVITCKKGVQGAQPSPVLDWM 47
           L+HE++V+  G C +             G+L   L             Q  Q    L   
Sbjct: 74  LQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLS 133

Query: 48  TRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLS 87
             + I      G+ YL  +     + RD+ + N          I DF +S
Sbjct: 134 QMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMS 180

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 39.2 bits (92), Expect = 8e-05
 Identities = 18/91 (19%), Positives = 32/91 (35%), Gaps = 22/91 (24%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWII----------HVITCKKGVQGAQPSPVLDWMTRV 50
            +H ++V       E    D+ + I             I+    +        L      
Sbjct: 68  GQHSHVVRYFSAWAE----DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAEL-----K 118

Query: 51  RIVVDALRGLEYLHEKVQPSIIQRDIRSSNI 81
            +++   RGL Y+H     S++  DI+ SNI
Sbjct: 119 DLLLQVGRGLRYIHSM---SLVHMDIKPSNI 146

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 39.2 bits (92), Expect = 8e-05
 Identities = 24/109 (22%), Positives = 38/109 (34%), Gaps = 28/109 (25%)

Query: 2   KHENLVELLG-------------YCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMT 48
           +HEN+V LLG             YC  G+L + L         +     A  +       
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL--RRKSRVLETDPAFAIANSTASTRD 165

Query: 49  RVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLS 87
            +       +G+ +L  K   + I RD+ + N          I DF L+
Sbjct: 166 LLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLA 211

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 39.1 bits (92), Expect = 9e-05
 Identities = 29/134 (21%), Positives = 46/134 (34%), Gaps = 43/134 (32%)

Query: 1   LKHENLVELLG-------------YCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWM 47
           LKH +++EL                C  G +   L                +  P  +  
Sbjct: 68  LKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLK--------------NRVKPFSENE 113

Query: 48  TRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARL 97
            R   +   + G+ YLH      I+ RD+  SN          IADF L+ Q      + 
Sbjct: 114 AR-HFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKH 169

Query: 98  HSTRVLGTFSYHAP 111
           ++    GT +Y +P
Sbjct: 170 YTL--CGTPNYISP 181

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 38.8 bits (91), Expect = 1e-04
 Identities = 25/118 (21%), Positives = 41/118 (34%), Gaps = 34/118 (28%)

Query: 1   LKHENLVELLGYCVE-------------GNLRD--------ELIWIIHVITCKKGVQGAQ 39
             + N+V+LLG C               G+L +         +  + H     +    + 
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166

Query: 40  PSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLS 87
             P L    ++ I      G+ YL E+     + RD+ + N          IADF LS
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLS 221

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 38.8 bits (91), Expect = 1e-04
 Identities = 16/110 (14%), Positives = 34/110 (30%), Gaps = 32/110 (29%)

Query: 1   LKHENLVELLG-------------YCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWM 47
               ++V LLG                 G+L+  L       + +  +            
Sbjct: 85  FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL------RSLRPAMANNPVLAPPSLS 138

Query: 48  TRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLS 87
             +++  +   G+ YL+       + RD+ + N          I DF ++
Sbjct: 139 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT 185

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 24/110 (21%), Positives = 38/110 (34%), Gaps = 26/110 (23%)

Query: 1   LKHENLVELLG-------------YCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWM 47
           L+H N+V LLG             YC  G+L + L+                    L+  
Sbjct: 69  LQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPP 128

Query: 48  TRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLS 87
             V +V     G+EYL       ++ +D+ + N          I+D  L 
Sbjct: 129 DFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLF 175

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 38.1 bits (89), Expect = 2e-04
 Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 33/116 (28%)

Query: 2   KHENLVELLG-------------YCVEGNL-------RDELIWIIHVITCKKGVQGAQPS 41
            HEN+V LLG             YC  G+L       R++          +K ++  +  
Sbjct: 107 SHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL 166

Query: 42  PVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLS 87
            VL +   +       +G+E+L  K   S + RD+ + N          I DF L+
Sbjct: 167 NVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLVTHGKVVKICDFGLA 219

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 38.0 bits (89), Expect = 2e-04
 Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 28/104 (26%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVIT--CKKG-----VQGAQPSPVLDWMTRVRIV 53
           +KH NLV+LLG C     R+   +I   IT     G     ++       +  +  + + 
Sbjct: 66  IKHPNLVQLLGVC----TREPPFYI---ITEFMTYGNLLDYLRECNRQE-VSAVVLLYMA 117

Query: 54  VDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLS 87
                 +EYL +K   + I RD+ + N          +ADF LS
Sbjct: 118 TQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLS 158

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 38.2 bits (89), Expect = 2e-04
 Identities = 30/143 (20%), Positives = 49/143 (34%), Gaps = 45/143 (31%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWII---------HVITCKKGVQGAQPSPVLDWMTRVR 51
           LKH N++ L    +     D  +W++         H+I   +  +  +    L       
Sbjct: 75  LKHPNVISLQKVFLSHA--DRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKS 132

Query: 52  IVVDALRGLEYLHEKVQPSIIQRDIRSSN--------------IADFNLSNQAPNMAARL 97
           ++   L G+ YLH      ++ RD++ +N              IAD           ARL
Sbjct: 133 LLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGF--------ARL 181

Query: 98  ---------HSTRVLGTFSYHAP 111
                        V+ TF Y AP
Sbjct: 182 FNSPLKPLADLDPVVVTFWYRAP 204

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 38.1 bits (89), Expect = 2e-04
 Identities = 16/71 (22%), Positives = 26/71 (36%), Gaps = 16/71 (22%)

Query: 51  RIVVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHST 100
             + D L  L +LH +    ++  D++ +NI           DF L  +     A     
Sbjct: 161 GYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAG--EV 215

Query: 101 RVLGTFSYHAP 111
           +  G   Y AP
Sbjct: 216 QE-GDPRYMAP 225

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 37.6 bits (88), Expect = 2e-04
 Identities = 20/118 (16%), Positives = 38/118 (32%), Gaps = 34/118 (28%)

Query: 1   LKHENLVELLG-------------YCVEGNLRD--------ELIWIIHVITCKKGVQGAQ 39
           + H ++++L G             Y   G+LR            ++    +         
Sbjct: 83  VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142

Query: 40  PSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLS 87
               L     +       +G++YL E     ++ RD+ + N          I+DF LS
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLS 197

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 36.9 bits (86), Expect = 5e-04
 Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 24/107 (22%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVIT--CKKG--------VQGAQPSPVLDWMTRV 50
             H ++ +L+G  +    +  L  I  VI    K G         +  +    L   T V
Sbjct: 82  FDHPHVAKLVGVSLRSRAKGRL-PIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLV 140

Query: 51  RIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLS 87
           R +VD   G+EYL  +   + I RD+ + N          +ADF LS
Sbjct: 141 RFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLS 184

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 36.8 bits (86), Expect = 5e-04
 Identities = 26/111 (23%), Positives = 37/111 (33%), Gaps = 28/111 (25%)

Query: 2   KHENLVELLG-------------YCVEGNLRDELIWIIHVITCKKGVQGAQPSP--VLDW 46
            H N+V LLG             YC  G+L + L        C K            LD 
Sbjct: 85  NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144

Query: 47  MTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLS 87
              +       +G+ +L  K   + I RD+ + N          I DF L+
Sbjct: 145 EDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLA 192

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 36.5 bits (85), Expect = 6e-04
 Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 15/63 (23%)

Query: 59  GLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSY 108
           G +YLH      +I RD++  N          I DF L+ +      R       GT +Y
Sbjct: 153 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL--CGTPNY 207

Query: 109 HAP 111
            AP
Sbjct: 208 IAP 210

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 36.4 bits (85), Expect = 6e-04
 Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 27/104 (25%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVIT--CKKG-----VQGAQPSPVLDWMTRVRIV 53
           L+H NLV+LLG  VE       ++I   +T    KG     ++    S  L     ++  
Sbjct: 71  LRHSNLVQLLGVIVEE---KGGLYI---VTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFS 123

Query: 54  VDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLS 87
           +D    +EYL      + + RD+ + N          ++DF L+
Sbjct: 124 LDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLT 164

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 36.5 bits (85), Expect = 6e-04
 Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 14/79 (17%)

Query: 44  LDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNM 93
           +     + ++ DA + L + H+     II RD++ +NI           DF ++    + 
Sbjct: 113 MTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADS 169

Query: 94  AARLHST-RVLGTFSYHAP 111
              +  T  V+GT  Y +P
Sbjct: 170 GNSVTQTAAVIGTAQYLSP 188

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 36.5 bits (85), Expect = 7e-04
 Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 15/63 (23%)

Query: 59  GLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSY 108
           G+EYLH +    II RDI+ SN          IADF +SN+     A L +T   GT ++
Sbjct: 149 GIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTV--GTPAF 203

Query: 109 HAP 111
            AP
Sbjct: 204 MAP 206

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 36.4 bits (84), Expect = 7e-04
 Identities = 25/109 (22%), Positives = 38/109 (34%), Gaps = 39/109 (35%)

Query: 1   LKHENLVELLGYCVE------------GNLRDELIWIIHVITCKKGVQGAQPSPVLDWMT 48
           L+HE LV+L     E            G+L D L         K         P L    
Sbjct: 319 LRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFL---------KGETGKYLRLPQL---- 365

Query: 49  RVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLS 87
            V +      G+ Y+      + + RD+R++N          +ADF L+
Sbjct: 366 -VDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLA 410

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 36.1 bits (84), Expect = 8e-04
 Identities = 22/102 (21%), Positives = 44/102 (43%), Gaps = 24/102 (23%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKG-----VQGAQPSPVLDWMTRVRIVVD 55
           L H N++ L+G  +     + L  ++ +     G     ++  Q +P +  +  +   + 
Sbjct: 79  LNHPNVLALIGIMLPP---EGLPHVL-LPYMCHGDLLQFIRSPQRNPTVKDL--ISFGLQ 132

Query: 56  ALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLS 87
             RG+EYL E+     + RD+ + N          +ADF L+
Sbjct: 133 VARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLA 171

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 36.4 bits (85), Expect = 8e-04
 Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 15/63 (23%)

Query: 59  GLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSY 108
           G +YLH      +I RD++  N          I DF L+ +      R       GT +Y
Sbjct: 127 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL--CGTPNY 181

Query: 109 HAP 111
            AP
Sbjct: 182 IAP 184

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 36.0 bits (84), Expect = 8e-04
 Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 39/109 (35%)

Query: 1   LKHENLVELLGYCVE------------GNLRDELIWIIHVITCKKGVQGAQPSPVLDWMT 48
           L+H+ LV L     +            G+L D L          K   G + +       
Sbjct: 65  LQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL----------KTPSGIKLTIN----K 110

Query: 49  RVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLS 87
            + +      G+ ++ E+   + I RD+R++N          IADF L+
Sbjct: 111 LLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLA 156

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 36.2 bits (84), Expect = 9e-04
 Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 39/109 (35%)

Query: 1   LKHENLVELLGYCVE------------GNLRDELIWIIHVITCKKGVQGAQPSPVLDWMT 48
           L+H+ LV+L     +            G+L D L         K      QP P L    
Sbjct: 240 LQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFL---------KSDEGSKQPLPKL---- 286

Query: 49  RVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLS 87
            +        G+ ++ ++   + I RD+R++N          IADF L+
Sbjct: 287 -IDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLA 331

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	111
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.94
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.94
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.94
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.94
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.94
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.93
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.93
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.93
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.93
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.93
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.92
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.92
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.91
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.91
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.9
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.9
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.88
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.88
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.87
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.82
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.81
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.81
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.81
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.81
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.8
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.8
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.8
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.8
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.8
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.79
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.79
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.79
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.79
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.79
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.79
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.78
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.78
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.78
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.78
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.78
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.78
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.78
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.78
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.78
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.78
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.78
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.78
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.78
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.77
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.77
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.77
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.77
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.77
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.77
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.77
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.77
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.77
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.77
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.77
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.77
3niz_A	311	Rhodanese family protein; structural genomics, str	99.76
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.76
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.76
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.76
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.76
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.76
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.76
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.76
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.76
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.76
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.76
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.76
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.75
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.75
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.75
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.75
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.75
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.75
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.75
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.75
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.75
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.75
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.75
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.75
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.75
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.75
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.75
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.75
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.75
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.74
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.74
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.74
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.74
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.74
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.74
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.74
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.74
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.74
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.74
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.74
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.73
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.73
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.73
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.73
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.73
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.73
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.73
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.73
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.73
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.73
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.73
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.73
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.73
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.73
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.73
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.73
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.72
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.72
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.72
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.72
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.72
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.72
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.72
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.72
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.72
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.72
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.71
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.71
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.71
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.71
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.71
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.71
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.71
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.71
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.71
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.71
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.71
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.71
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.71
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.7
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.7
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.7
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.7
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.7
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.7
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.7
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.7
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.7
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.7
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.7
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.7
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.69
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.69
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.69
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.69
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.69
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.69
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.69
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.69
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.69
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.69
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.69
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.69
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.69
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.69
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.69
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.69
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.69
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.68
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.68
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.68
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.68
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.68
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.68
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.68
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.68
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.68
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.68
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.68
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.68
3bhy_A	283	Death-associated protein kinase 3; death associate	99.68
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.68
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.67
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.67
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.67
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.67
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.67
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.67
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.67
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.67
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.67
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.67
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.67
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.66
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.66
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.66
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.66
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.66
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.66
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.66
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.66
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.65
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.65
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.65
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.65
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.65
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.65
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.65
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.65
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.65
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.65
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.65
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.64
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.64
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.64
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.64
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.64
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.64
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.64
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.63
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.63
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.63
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.63
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.62
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.62
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.61
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.61
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.61
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.61
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.61
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.6
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.59
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.59
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.59
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.59
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.59
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.58
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.57
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.57
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.55
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.54
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.54
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.54
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.54
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.51
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.5
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.5
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.47
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.47
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.45
3uqc_A	286	Probable conserved transmembrane protein; structur	99.43
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.22
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	98.84
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	98.48
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	97.71
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	95.99
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	95.94
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	90.14

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.94  E-value=6.5e-28  Score=141.60  Aligned_cols=105  Identities=23%  Similarity=0.247  Sum_probs=86.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||+++++|++.+...++.+++..+++...+..   ...+++.++..++.|++.|+.|+|++   +|+||||||+|
T Consensus        89 l~HpnIv~l~~~~~~~~~~yivmEy~~gG~L~~~i~~---~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeN  162 (311)
T 4aw0_A           89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPEN  162 (311)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred             CCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHH
Confidence            6899999999999998776677777777666555432   23489999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                |+|||+++.+..........+.+||+.||||
T Consensus       163 ILl~~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAP  203 (311)
T 4aw0_A          163 ILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP  203 (311)
T ss_dssp             EEECTTSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCH
T ss_pred             eEEcCCCCEEEEEcCCceecCCCCCcccccCcccCcccCCH
Confidence                      4899999877544333234567899999998

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.94  E-value=1.4e-27  Score=140.25  Aligned_cols=105  Identities=24%  Similarity=0.412  Sum_probs=78.8

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||+++|++.++. ..+++++++.+++...+....  ..+++.++..++.|++.|+.|+|++   +|+|||+||+|
T Consensus        89 l~HpNIV~l~g~~~~~~-~~iVmEy~~gGsL~~~l~~~~--~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~N  162 (307)
T 3omv_A           89 TRHVNILLFMGYMTKDN-LAIVTQWCEGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNN  162 (307)
T ss_dssp             CCCTTBCCEEEEECSSS-CEEEEECCSSCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSS
T ss_pred             CCCCCEeeEEEEEECCe-EEEEEEcCCCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHH
Confidence            68999999999987543 566778887777766554322  2389999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                |+|||+|+............+.+||+.||||
T Consensus       163 ILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAP  203 (307)
T 3omv_A          163 IFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAP  203 (307)
T ss_dssp             EEEETTEEEEECCCSSCBC------------CCCCTTSCCH
T ss_pred             EEECCCCcEEEeeccCceecccCCcceeecccccCCCccCH
Confidence                      5999999876543322224556899999998

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.94  E-value=1.2e-27  Score=140.77  Aligned_cols=108  Identities=21%  Similarity=0.257  Sum_probs=87.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCC-------------CCCCCHHHHHHHHHHHHHHHHHhhhcC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQP-------------SPVLDWMTRVRIVVDALRGLEYLHEKV   67 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~l~~~~~~~~~~~i~~~l~~lh~~~   67 (111)
                      ++|||||+++|+|.+.+...++++++..+++...+.....             ...+++.++..++.|++.|+.|||++ 
T Consensus        86 l~HpNIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~-  164 (308)
T 4gt4_A           86 LQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH-  164 (308)
T ss_dssp             CCCTTBCCEEEEECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             CCCCCCCCcceEEEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC-
Confidence            6899999999999988878888899988887666543221             23489999999999999999999999 


Q ss_pred             CCCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           68 QPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        68 ~~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                        +++|||+|++|          |+|||+++...............||+.||||
T Consensus       165 --~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAP  216 (308)
T 4gt4_A          165 --HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAP  216 (308)
T ss_dssp             --TCCCSCCSGGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCH
T ss_pred             --CCCCCCccccceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCH
Confidence              99999999999          5999999876544333223456789999998

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.94  E-value=1.3e-27  Score=141.61  Aligned_cols=108  Identities=19%  Similarity=0.294  Sum_probs=79.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCC------------CCCCCCHHHHHHHHHHHHHHHHHhhhcCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQ------------PSPVLDWMTRVRIVVDALRGLEYLHEKVQ   68 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~l~~~~~~~~~~~i~~~l~~lh~~~~   68 (111)
                      ++|||||+++|+|.+.+...++++++..+++...+....            ....+++.++..++.|++.|+.|+|++  
T Consensus       100 l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~--  177 (329)
T 4aoj_A          100 LQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL--  177 (329)
T ss_dssp             CCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             CCCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC--
Confidence            689999999999999887888889998888766554322            123489999999999999999999999  


Q ss_pred             CCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           69 PSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        69 ~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                       +++|||+|++|          |+|||+++...............||+.||||
T Consensus       178 -~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAP  229 (329)
T 4aoj_A          178 -HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPP  229 (329)
T ss_dssp             -TCCCSCCCGGGEEEETTTEEEECCCC----------------CCCCGGGCCH
T ss_pred             -CeecccccHhhEEECCCCcEEEcccccceeccCCCcceecCcccccccccCh
Confidence             99999999999          5999999876554333223456789999998

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.94  E-value=6e-28  Score=141.49  Aligned_cols=108  Identities=22%  Similarity=0.356  Sum_probs=87.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCC----------CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGA----------QPSPVLDWMTRVRIVVDALRGLEYLHEKVQPS   70 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~   70 (111)
                      ++|||||+++|+|.+++...+++++++.+++...+...          .....+++.++..++.|++.|+.|+|++   +
T Consensus        72 l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~  148 (299)
T 4asz_A           72 LQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---H  148 (299)
T ss_dssp             CCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred             CCCCCCccEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---C
Confidence            68999999999999988778888998888776665432          2234589999999999999999999999   9


Q ss_pred             eeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           71 IIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        71 i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      ++|||+|++|          |+|||+++...............||+.||||
T Consensus       149 iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAP  199 (299)
T 4asz_A          149 FVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPP  199 (299)
T ss_dssp             CCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCH
T ss_pred             cccCccCHhhEEECCCCcEEECCcccceecCCCCceeecCceecChhhcCH
Confidence            9999999999          5999999866544332223345689999998

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.93  E-value=5.1e-27  Score=139.55  Aligned_cols=102  Identities=24%  Similarity=0.350  Sum_probs=85.3

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||+++++|.+.+...++.++++.+++...+..    ..+++.++..++.|++.|+.|+|++   +|+||||||+|
T Consensus       128 l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~----~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~N  200 (346)
T 4fih_A          128 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDS  200 (346)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEECCCTTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred             CCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHH
Confidence            6899999999999998877777788877766554432    2389999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                |+|||+++.+......  ..+.+||+.||||
T Consensus       201 ILl~~~g~vKl~DFGla~~~~~~~~~--~~~~~GTp~YmAP  239 (346)
T 4fih_A          201 ILLTHDGRVKLSDFGFCAQVSKEVPR--RKSLVGTPYWMAP  239 (346)
T ss_dssp             EEECTTCCEEECCCTTCEECCSSSCC--BCCCCSCGGGCCH
T ss_pred             EEECCCCCEEEecCcCceecCCCCCc--ccccccCcCcCCH
Confidence                      4899999876554332  4567899999998

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.93  E-value=1.7e-27  Score=141.78  Aligned_cols=105  Identities=20%  Similarity=0.245  Sum_probs=85.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      |+|||||++++++.+.+...++.+++..+++...+... +...+++.++..++.|++.|+.|+|++   +|+||||||+|
T Consensus        80 l~HpnIV~~~~~~~~~~~~yiVmEy~~gg~L~~~i~~~-~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~N  155 (350)
T 4b9d_A           80 MKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQ-KGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQN  155 (350)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGG
T ss_pred             CCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHHc-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHH
Confidence            68999999999999988777777777777766555332 233378899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                |+|||+++........  ..+.+||+.||||
T Consensus       156 ILl~~~g~vKl~DFGla~~~~~~~~~--~~~~~GT~~YmAP  194 (350)
T 4b9d_A          156 IFLTKDGTVQLGDFGIARVLNSTVEL--ARACIGTPYYLSP  194 (350)
T ss_dssp             EEECTTCCEEECSTTEESCCCHHHHH--HHHHHSCCTTCCH
T ss_pred             EEECCCCCEEEcccccceeecCCccc--ccccCCCccccCH
Confidence                      4999999876543222  3456799999998

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.93  E-value=2.2e-27  Score=139.16  Aligned_cols=103  Identities=19%  Similarity=0.210  Sum_probs=82.5

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||++++++.+.+...++.+++..+++...+..   ...+++.++..++.|++.|+.|+|++   +|+|||+||+|
T Consensus        83 l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~N  156 (304)
T 3ubd_A           83 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSK---EVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPEN  156 (304)
T ss_dssp             CCCTTEECEEEEEEETTEEEEEECCCTTCEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGG
T ss_pred             CCCCCCCeEEEEEEECCEEEEEEEcCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHH
Confidence            6899999999999998877777777777766555533   23489999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++........  ..+.+||+.||||
T Consensus       157 ILl~~~g~vKl~DFGla~~~~~~~~~--~~~~~GT~~YmAP  195 (304)
T 3ubd_A          157 ILLDEEGHIKLTDFGLSKESIDHEKK--AYSFCGTVEYMAP  195 (304)
T ss_dssp             EEECTTSCEEEESSEEEEC-----CC--CCSCCCCGGGCCH
T ss_pred             eEEcCCCCEEecccccceeccCCCcc--ccccccCcccCCH
Confidence                      4899999865443322  3567899999998

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.93  E-value=1.2e-26  Score=140.91  Aligned_cols=102  Identities=24%  Similarity=0.350  Sum_probs=85.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||+++++|.+.+...++.+++..+++...+..    ..+++.++..++.|++.|+.|||++   +|+||||||+|
T Consensus       205 l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L~~~i~~----~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~N  277 (423)
T 4fie_A          205 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDS  277 (423)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTT
T ss_pred             CCCCCCCceEEEEEECCEEEEEEeCCCCCcHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHH
Confidence            6899999999999998877777788877766554432    2389999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                |+|||+++.+......  ..+.+||+.||||
T Consensus       278 ILl~~~g~vKl~DFGla~~~~~~~~~--~~~~~GTp~YmAP  316 (423)
T 4fie_A          278 ILLTHDGRVKLSDFGFCAQVSKEVPR--RKSLVGTPYWMAP  316 (423)
T ss_dssp             EEECTTCCEEECCCTTCEECCSSCCC--BCCCEECTTTCCH
T ss_pred             EEEcCCCCEEEecCccceECCCCCcc--ccccccCcCcCCH
Confidence                      4899999876554332  4567899999998

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.93  E-value=8.3e-27  Score=138.22  Aligned_cols=105  Identities=23%  Similarity=0.281  Sum_probs=82.1

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||++++++.+.+...++.++++.+++...+...   ..+++.++..++.|++.|+.|+|++   +|+||||||+|
T Consensus       107 l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~---~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~N  180 (336)
T 4g3f_A          107 LSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQM---GCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADN  180 (336)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGG
T ss_pred             CCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHH
Confidence            68999999999999988777777887777766655432   3389999999999999999999999   99999999999


Q ss_pred             -----------cCCCcccccCCCCcccc---cccccCccccccCC
Q 047898           81 -----------IADFNLSNQAPNMAARL---HSTRVLGTFSYHAP  111 (111)
Q Consensus        81 -----------i~~~g~~~~~~~~~~~~---~~~~~~~~~~~~aP  111 (111)
                                 |+|||+++.+.......   .....+||+.||||
T Consensus       181 ILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAP  225 (336)
T 4g3f_A          181 VLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAP  225 (336)
T ss_dssp             EEECTTSCCEEECCCTTCEEC------------CCCCCCGGGCCH
T ss_pred             EEEeCCCCEEEEeeCCCCeEccCCCcccceecCCccccCccccCH
Confidence                       48999998765432211   12346799999998

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.92  E-value=2.8e-26  Score=133.82  Aligned_cols=101  Identities=25%  Similarity=0.332  Sum_probs=77.5

Q ss_pred             CCCccceeeeeeeeeCC----ccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC--eeec
Q 047898            1 LKHENLVELLGYCVEGN----LRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPS--IIQR   74 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~--i~h~   74 (111)
                      |+|||||+++++|.+..    ...++.+++..+++...+..   ...+++.++..++.|++.|+.|+|++   +  |+||
T Consensus        82 l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~ylH~~---~~~IiHR  155 (290)
T 3fpq_A           82 LQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHR  155 (290)
T ss_dssp             CCCTTBCCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCC
T ss_pred             CCCCCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCEEec
Confidence            68999999999997531    12344566666665554432   23489999999999999999999998   7  9999


Q ss_pred             CCCCCC-----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           75 DIRSSN-----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        75 ~l~~~n-----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      ||||+|           |+|||+|+......    ..+.+||+.||||
T Consensus       156 DlKp~NILl~~~~g~vKl~DFGla~~~~~~~----~~~~~GTp~YmAP  199 (290)
T 3fpq_A          156 DLKCDNIFITGPTGSVKIGDLGLATLKRASF----AKAVIGTPEFMAP  199 (290)
T ss_dssp             CCCGGGEEESSTTSCEEECCTTGGGGCCTTS----BEESCSSCCCCCG
T ss_pred             ccChhheeEECCCCCEEEEeCcCCEeCCCCc----cCCcccCccccCH
Confidence            999999           48999997543322    3457899999998

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.92  E-value=6.8e-26  Score=131.33  Aligned_cols=101  Identities=23%  Similarity=0.279  Sum_probs=70.8

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||++++++.+.+...++.+++ .+++...+.   ....+++.++..++.|++.|+.|+|++   +++|||+||+|
T Consensus        70 l~HpnIv~~~~~~~~~~~~~ivmEy~-~g~L~~~l~---~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~N  142 (275)
T 3hyh_A           70 LRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIV---QRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPEN  142 (275)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEEECC-CEEHHHHHH---HSCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTT
T ss_pred             CCCCCCCeEEEEEEECCEEEEEEeCC-CCCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHH
Confidence            68999999999999877666666655 333333332   223489999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++.......   ..+.+||+.||||
T Consensus       143 ILl~~~~~vkl~DFGla~~~~~~~~---~~~~~GT~~Y~AP  180 (275)
T 3hyh_A          143 LLLDEHLNVKIADFGLSNIMTDGNF---LKTSCGSPNYAAP  180 (275)
T ss_dssp             EEECTTCCEEECCSSCC------------------CTTSCH
T ss_pred             eEECCCCCEEEeecCCCeecCCCCc---cCCeeECcccCCh
Confidence                      489999976543322   3457899999998

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.91  E-value=2e-25  Score=133.30  Aligned_cols=107  Identities=20%  Similarity=0.289  Sum_probs=83.3

Q ss_pred             CCccceeeeeeeeeCC-ccchhhhhhhhhhcccCcCCCC-------------CCCCCCHHHHHHHHHHHHHHHHHhhhcC
Q 047898            2 KHENLVELLGYCVEGN-LRDELIWIIHVITCKKGVQGAQ-------------PSPVLDWMTRVRIVVDALRGLEYLHEKV   67 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~~~~~~~~~~i~~~l~~lh~~~   67 (111)
                      +|||||+++|+|...+ ...++++++..+++...+....             ....+++.++..++.|++.|+.|+|++ 
T Consensus       126 hhpnIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~-  204 (353)
T 4ase_A          126 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-  204 (353)
T ss_dssp             CCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             CCCcEEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC-
Confidence            3599999999997644 4566778888877765543211             123488999999999999999999999 


Q ss_pred             CCCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           68 QPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        68 ~~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                        +++|||||++|          |+|||+++.+.............||+.||||
T Consensus       205 --~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAP  256 (353)
T 4ase_A          205 --KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP  256 (353)
T ss_dssp             --TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCH
T ss_pred             --CeecCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCH
Confidence              99999999999          5999999977655443334456789999998

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.91  E-value=3.4e-25  Score=129.91  Aligned_cols=108  Identities=22%  Similarity=0.326  Sum_probs=69.5

Q ss_pred             CCCccceeeeeeeeeCCcc------------chhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCC
Q 047898            1 LKHENLVELLGYCVEGNLR------------DELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQ   68 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~   68 (111)
                      ++|||||++++++...+..            .++.+++..+++...+.........+...+..++.|++.|+.|+|++  
T Consensus        60 l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~--  137 (299)
T 4g31_A           60 LEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK--  137 (299)
T ss_dssp             CCCTTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             CCCCCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC--
Confidence            6899999999999864431            23344444444444443332222355667888999999999999999  


Q ss_pred             CCeeecCCCCCC----------cCCCcccccCCCCcccc----------cccccCccccccCC
Q 047898           69 PSIIQRDIRSSN----------IADFNLSNQAPNMAARL----------HSTRVLGTFSYHAP  111 (111)
Q Consensus        69 ~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~----------~~~~~~~~~~~~aP  111 (111)
                       +|+||||||+|          |+|||+++.........          ...+.+||+.||||
T Consensus       138 -~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAP  199 (299)
T 4g31_A          138 -GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSP  199 (299)
T ss_dssp             -TCCCCCCCGGGEEECTTCCEEECCCCCC--------------------------CCCTTSCH
T ss_pred             -cCccccCcHHHeEECCCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCH
Confidence             99999999999          48999998765432110          12345799999998

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.90  E-value=1.3e-24  Score=127.67  Aligned_cols=107  Identities=22%  Similarity=0.290  Sum_probs=79.2

Q ss_pred             CCCccceeeeeeeeeCCc----cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcC-----CCCe
Q 047898            1 LKHENLVELLGYCVEGNL----RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKV-----QPSI   71 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~-----~~~i   71 (111)
                      ++|||||+++++|...+.    ..+++++++.+++...+..    ..+++.+...++.|++.|+.|+|++.     .++|
T Consensus        54 l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~I  129 (303)
T 3hmm_A           54 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAI  129 (303)
T ss_dssp             CCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCE
T ss_pred             CCCCCCCcEEEEEEecCCCceEEEEEecCCCCCcHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCE
Confidence            589999999999986542    3456677777777665532    23889999999999999999999751     3389


Q ss_pred             eecCCCCCC----------cCCCcccccCCCCcccc--cccccCccccccCC
Q 047898           72 IQRDIRSSN----------IADFNLSNQAPNMAARL--HSTRVLGTFSYHAP  111 (111)
Q Consensus        72 ~h~~l~~~n----------i~~~g~~~~~~~~~~~~--~~~~~~~~~~~~aP  111 (111)
                      +|||+||+|          |+|||+++.........  .....+||+.||||
T Consensus       130 iHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAP  181 (303)
T 3hmm_A          130 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP  181 (303)
T ss_dssp             ECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCH
T ss_pred             eeccCCcccEEECCCCCEEEEeCCCCccccCCCCceeeecccccccccccCH
Confidence            999999999          59999988654433221  12346799999998

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.90  E-value=1.8e-24  Score=137.07  Aligned_cols=101  Identities=17%  Similarity=0.183  Sum_probs=82.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||+++++|++.+...++.+++..+++...+..   ...+++..+..++.|++.|+.|||++   +|+||||||+|
T Consensus       249 ~~HP~IV~l~~~f~~~~~lylVmEy~~GGdL~~~l~~---~~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeN  322 (689)
T 3v5w_A          249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ---HGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPAN  322 (689)
T ss_dssp             SCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGG
T ss_pred             CCCCCEeEEEEEEEECCEEEEEEecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHH
Confidence            4799999999999998776667677766665544432   23489999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                |+|||+|+......    ..+.+||+.||||
T Consensus       323 ILld~~G~vKL~DFGlA~~~~~~~----~~t~~GTp~YmAP  359 (689)
T 3v5w_A          323 ILLDEHGHVRISDLGLACDFSKKK----PHASVGTHGYMAP  359 (689)
T ss_dssp             EEECTTSCEEECCCTTCEECSSCC----CCSCCSCGGGCCH
T ss_pred             eEEeCCCCEEecccceeeecCCCC----CCCccCCcCccCH
Confidence                      48999998764432    3457899999998

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.88  E-value=1.8e-23  Score=131.44  Aligned_cols=103  Identities=20%  Similarity=0.243  Sum_probs=82.8

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||+++++|.+.....++.+++..+++...+...  ...+++.++..++.|++.|+.|||++   +++||||||+|
T Consensus       211 l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L~~~i~~~--~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~N  285 (573)
T 3uto_A          211 LRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADE--HNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPEN  285 (573)
T ss_dssp             TCCTTBCCEEEEEECSSEEEEEEECCCCCBHHHHHTCT--TSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGG
T ss_pred             CCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhh
Confidence            68999999999999877666666777666554444322  23389999999999999999999999   99999999999


Q ss_pred             ------------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ------------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ------------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                  |+|||+++.+.....   ..+.+||+.||||
T Consensus       286 ill~~~~~~~vKl~DFG~a~~~~~~~~---~~~~~GT~~y~AP  325 (573)
T 3uto_A          286 IMFTTKRSNELKLIDFGLTAHLDPKQS---VKVTTGTAEFAAP  325 (573)
T ss_dssp             EEESSSSCCCEEECCCSSCEECCTTSE---EEEECSSGGGCCH
T ss_pred             ccccCCCCCCEEEeeccceeEccCCCc---eeeeEECccccCH
Confidence                        489999987754432   3456899999998

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.88  E-value=2.7e-23  Score=125.83  Aligned_cols=104  Identities=24%  Similarity=0.357  Sum_probs=75.1

Q ss_pred             CCCccceeeeeeeeeCC------ccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeec
Q 047898            1 LKHENLVELLGYCVEGN------LRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQR   74 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~   74 (111)
                      ++|||||++++++....      ...++.+++. +++...+.   ....+++.++..++.|++.|+.|+|++   +|+||
T Consensus       110 l~HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~~-g~L~~~i~---~~~~l~~~~~~~~~~qil~al~ylH~~---~iiHR  182 (398)
T 4b99_A          110 FKHDNIIAIKDILRPTVPYGEFKSVYVVLDLME-SDLHQIIH---SSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHR  182 (398)
T ss_dssp             CCCTTBCCEEEECCCSSCTTTCCCEEEEEECCS-EEHHHHHT---SSSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCC
T ss_pred             cCCCCcceEeeeeecccccccCCEEEEEEeCCC-CCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCC
Confidence            68999999999987532      1233444443 33333332   334499999999999999999999999   99999


Q ss_pred             CCCCCC----------cCCCcccccCCCCcc--cccccccCccccccCC
Q 047898           75 DIRSSN----------IADFNLSNQAPNMAA--RLHSTRVLGTFSYHAP  111 (111)
Q Consensus        75 ~l~~~n----------i~~~g~~~~~~~~~~--~~~~~~~~~~~~~~aP  111 (111)
                      ||||+|          ++|||+++.+.....  .....+.+||++||||
T Consensus       183 DlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~AP  231 (398)
T 4b99_A          183 DLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAP  231 (398)
T ss_dssp             CCCGGGEEECTTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCH
T ss_pred             CcCccccccCCCCCEEEeecceeeecccCccccccccccceeChHhcCH
Confidence            999999          489999987654321  1123567899999998

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.87  E-value=1.1e-22  Score=121.95  Aligned_cols=81  Identities=15%  Similarity=0.243  Sum_probs=66.9

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +|||||+++++|.+.+...++.++++.+++.+.+.      .+++.++..++.|++.|+.|+|++   +|+|||+||+| 
T Consensus        78 ~h~nIv~l~~~~~~~~~~~lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNi  148 (361)
T 4f9c_A           78 GQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNF  148 (361)
T ss_dssp             SBTTBCCCSEEEEETTEEEEEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGE
T ss_pred             CCCCCceEEEEEEECCEEEEEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHe
Confidence            69999999999998776666666666555444331      288999999999999999999999   99999999999 


Q ss_pred             ----------cCCCcccccCC
Q 047898           81 ----------IADFNLSNQAP   91 (111)
Q Consensus        81 ----------i~~~g~~~~~~   91 (111)
                                ++|||+|+...
T Consensus       149 Ll~~~~~~~kl~DFGla~~~~  169 (361)
T 4f9c_A          149 LYNRRLKKYALVDFGLAQGTH  169 (361)
T ss_dssp             EEETTTTEEEECCCTTCEECT
T ss_pred             EEeCCCCeEEECcCCCCcccC
Confidence                      48999987544

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.82  E-value=1.3e-21  Score=123.08  Aligned_cols=99  Identities=15%  Similarity=0.133  Sum_probs=77.8

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +|+||+++++++++.+..+++.++++.+++.+.+....   .++..   .++.|++.|+.|+|++   +|+||||||+| 
T Consensus       300 ~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~~---~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNI  370 (569)
T 4azs_A          300 AGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGE---EIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNV  370 (569)
T ss_dssp             TTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTTC---CCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGE
T ss_pred             CCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhCC---CCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhE
Confidence            68999999999999888888888888777766665432   25554   4788999999999999   99999999999 


Q ss_pred             ---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                               |+|||+++........  ..+.+||+.||||
T Consensus       371 LL~~dg~vKL~DFGlAr~~~~~~~~--~~t~vGTp~YmAP  408 (569)
T 4azs_A          371 MVDARQHARLIDFGSIVTTPQDCSW--PTNLVQSFFVFVN  408 (569)
T ss_dssp             EECTTSCEEECCCTTEESCC---CC--SHHHHHHHHHHHH
T ss_pred             EECCCCCEEEeecccCeeCCCCCcc--ccCceechhhccH
Confidence                     4899999876554332  3456789999886

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.81  E-value=2.4e-20  Score=114.28  Aligned_cols=105  Identities=15%  Similarity=0.074  Sum_probs=83.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||++++++|.+.+...++++++..+++...+...  ...+++..+..++.|++.|+.|+|+.   +++|||+||+|
T Consensus       131 ~~hp~Iv~l~~~~~~~~~~~lV~Ey~~gg~L~~~l~~~--~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~N  205 (437)
T 4aw2_A          131 GDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKF--EDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDN  205 (437)
T ss_dssp             SCTTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred             CCCCCEEEEEEEEeeCCEEEEEEecCCCCcHHHHHHHc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHH
Confidence            47999999999999888777777877777666555432  23389999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++........ .....+||+.|+||
T Consensus       206 ILl~~~g~vkL~DFGla~~~~~~~~~-~~~~~~GT~~Y~AP  245 (437)
T 4aw2_A          206 ILMDMNGHIRLADFGSCLKLMEDGTV-QSSVAVGTPDYISP  245 (437)
T ss_dssp             EEECTTSCEEECCCTTCEECCTTSCE-ECCSCCSCGGGCCH
T ss_pred             eeEcCCCCEEEcchhhhhhcccCCCc-ccccccCCcCeeCh
Confidence                      4899998766543321 13346799999998

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.81  E-value=1.3e-20  Score=114.28  Aligned_cols=102  Identities=23%  Similarity=0.217  Sum_probs=80.7

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +||||++++++|.+.+...++++++..+++...+..   ...+++.++..++.|++.|+.|||++   +++|||+||+| 
T Consensus       111 ~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NI  184 (396)
T 4dc2_A          111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNV  184 (396)
T ss_dssp             TCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGE
T ss_pred             CCCCcCeeEEEEEECCEEEEEEEcCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHE
Confidence            799999999999987766667677666555433332   23389999999999999999999999   99999999999 


Q ss_pred             ---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                               ++|||+++........  ..+.+||+.|+||
T Consensus       185 Ll~~~g~ikL~DFGla~~~~~~~~~--~~~~~gt~~Y~aP  222 (396)
T 4dc2_A          185 LLDSEGHIKLTDYGMCKEGLRPGDT--TSTFCGTPNYIAP  222 (396)
T ss_dssp             EECTTSCEEECCCTTCBCCCCTTCC--BCCCCBCGGGCCH
T ss_pred             EECCCCCEEEeecceeeecccCCCc--cccccCCcccCCc
Confidence                     4899998754333222  4567899999998

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.81  E-value=3.8e-20  Score=111.82  Aligned_cols=102  Identities=25%  Similarity=0.316  Sum_probs=81.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||++++++|.+.+...++++++..+++...+..   ...++..++..++.|++.|+.|||+.   +++|+|++|+|
T Consensus        72 l~hp~Iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~N  145 (384)
T 4fr4_A           72 LEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQ---NVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDN  145 (384)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred             CCCCCCCcEEEEEEeCCEEEEEEecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHH
Confidence            5799999999999987766667677766655544433   23389999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||++........   ..+..||+.|+||
T Consensus       146 Ill~~~g~vkL~DFG~a~~~~~~~~---~~~~~gt~~Y~aP  183 (384)
T 4fr4_A          146 ILLDEHGHVHITDFNIAAMLPRETQ---ITTMAGTKPYMAP  183 (384)
T ss_dssp             EEECTTSCEEECCCTTCEECCTTCC---BCCCCSCGGGCCG
T ss_pred             eEECCCCCEEEeccceeeeccCCCc---eeccCCCccccCC
Confidence                      489999876543322   3456799999998

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.81  E-value=4.9e-20  Score=109.10  Aligned_cols=105  Identities=27%  Similarity=0.341  Sum_probs=81.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+...++++++..+.+...+..   ...+++.++..++.|++.|+.|||+.   +++|+|++++|
T Consensus        62 l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~N  135 (323)
T 3tki_A           62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPEN  135 (323)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGSBT---TTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred             CCCCCCCeEEEEEecCCeEEEEEEcCCCCcHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHH
Confidence            5899999999999987766666677666655555432   33489999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+................||+.|+||
T Consensus       136 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP  176 (323)
T 3tki_A          136 LLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP  176 (323)
T ss_dssp             EEECTTCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCH
T ss_pred             EEEeCCCCEEEEEeeccceeccCCcccccCCCccCcCccCc
Confidence                      4899998765433222223456789999987

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.80  E-value=2.8e-20  Score=110.74  Aligned_cols=103  Identities=22%  Similarity=0.189  Sum_probs=80.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+...++.+++..+.+...+..   ...++..++..++.|++.|+.|||++   +++|||++|+|
T Consensus        62 l~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~N  135 (337)
T 1o6l_A           62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR---ERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLEN  135 (337)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGG
T ss_pred             CCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHH
Confidence            5799999999999987766666666665554333322   23388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++........  ..+.+||+.|+||
T Consensus       136 Ill~~~g~vkL~DFG~a~~~~~~~~~--~~~~~gt~~y~aP  174 (337)
T 1o6l_A          136 LMLDKDGHIKITDFGLCKEGISDGAT--MKTFCGTPEYLAP  174 (337)
T ss_dssp             EEECTTSCEEECCCTTCBCSCCTTCC--BCCCEECGGGCCG
T ss_pred             EEECCCCCEEEeeccchhhcccCCCc--ccccccChhhCCh
Confidence                      4899998764433222  3456789999998

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.80  E-value=2.9e-20  Score=110.32  Aligned_cols=102  Identities=22%  Similarity=0.241  Sum_probs=80.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.+.+...++.+++..+++...+...   ..++..++..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        71 l~hpnIv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~N  144 (328)
T 3fe3_A           71 LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAH---GRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAEN  144 (328)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGG
T ss_pred             CCCCCEeeEEEEEEECCEEEEEEECCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHH
Confidence            58999999999999877666666776655554443222   2388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++.......   ....+||+.|+||
T Consensus       145 Ill~~~~~~kl~DFG~a~~~~~~~~---~~~~~gt~~y~aP  182 (328)
T 3fe3_A          145 LLLDADMNIKIADFGFSNEFTVGGK---LDAFCGAPPYAAP  182 (328)
T ss_dssp             EEECTTSCEEECSTTCCGGGSSSCG---GGTTSSSGGGCCH
T ss_pred             EEEcCCCCEEEeeccCceecCCCCc---cccccCCcceeCc
Confidence                      489999876543322   3456789999997

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.80  E-value=1.8e-20  Score=112.16  Aligned_cols=102  Identities=23%  Similarity=0.255  Sum_probs=75.7

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +||||+++++++.+.+...++++++..+++...+..   ...+++.++..++.|++.|+.|||++   +++|||++|+| 
T Consensus        82 ~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NI  155 (353)
T 3txo_A           82 NHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQK---SRRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNV  155 (353)
T ss_dssp             TCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGE
T ss_pred             CCCceeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHE
Confidence            699999999999987766666666665554433322   23389999999999999999999999   99999999999 


Q ss_pred             ---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                               ++|||+++........  ..+.+||+.|+||
T Consensus       156 Ll~~~g~ikL~DFG~a~~~~~~~~~--~~~~~gt~~y~aP  193 (353)
T 3txo_A          156 LLDHEGHCKLADFGMCKEGICNGVT--TATFCGTPDYIAP  193 (353)
T ss_dssp             EECTTSCEEECCCTTCBCSCC-----------CCGGGCCH
T ss_pred             EECCCCCEEEccccceeecccCCcc--ccccCCCcCeECh
Confidence                     4899998754433222  3456799999998

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.80  E-value=6.3e-20  Score=112.63  Aligned_cols=103  Identities=18%  Similarity=0.222  Sum_probs=80.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.+.+...++++++..+++...+..   ...+++..+..++.|++.|+.|+|++   +++|+|++|+|
T Consensus        67 l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~---~~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~N  140 (444)
T 3soa_A           67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVA---REYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPEN  140 (444)
T ss_dssp             CCBTTBCCEEEEEECSSEEEEEECCCBCCBHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTT
T ss_pred             CCCcCCCeEEEEEEECCEEEEEEEeCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHH
Confidence            5899999999999987766666666665554333322   23388999999999999999999999   99999999999


Q ss_pred             -------------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 -------------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 -------------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                   ++|||++.........  .....||+.|+||
T Consensus       141 Ill~~~~~~~~vkL~DFG~a~~~~~~~~~--~~~~~gt~~Y~AP  182 (444)
T 3soa_A          141 LLLASKLKGAAVKLADFGLAIEVEGEQQA--WFGFAGTPGYLSP  182 (444)
T ss_dssp             EEESBSSTTCCEEECCCSSCBCCCTTCCB--CCCSCSCGGGCCH
T ss_pred             EEEeccCCCCcEEEccCceeEEecCCCce--eecccCCcccCCH
Confidence                         3799998766543322  3446789999998

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.80  E-value=4.1e-20  Score=110.32  Aligned_cols=102  Identities=23%  Similarity=0.273  Sum_probs=79.9

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +||||+++++++.+.+...++.+++..+++...+..   ...+++.++..++.|++.|+.|+|++   +++|+|++|+| 
T Consensus        76 ~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NI  149 (345)
T 1xjd_A           76 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQS---CHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNI  149 (345)
T ss_dssp             TCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGE
T ss_pred             CCCCCCcEEEEEEeCCEEEEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhE
Confidence            799999999999987766666676666555444332   12388999999999999999999999   99999999999 


Q ss_pred             ---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                               ++|||+++........  ..+.+||+.|+||
T Consensus       150 ll~~~g~vkL~DFG~a~~~~~~~~~--~~~~~gt~~y~aP  187 (345)
T 1xjd_A          150 LLDKDGHIKIADFGMCKENMLGDAK--TNTFCGTPDYIAP  187 (345)
T ss_dssp             EECTTSCEEECCCTTCBCCCCTTCC--BCCCCSCGGGCCH
T ss_pred             EECCCCCEEEeEChhhhhcccCCCc--ccCCCCCcccCCh
Confidence                     4899998754332222  3456899999997

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.79  E-value=8.8e-20  Score=109.73  Aligned_cols=107  Identities=25%  Similarity=0.392  Sum_probs=80.7

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCC-------------CCCCCCHHHHHHHHHHHHHHHHHhhhcCC
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQ-------------PSPVLDWMTRVRIVVDALRGLEYLHEKVQ   68 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~~~~~~~~~~i~~~l~~lh~~~~   68 (111)
                      +||||++++++|...+...++++++..+++...+....             ....+++.++..++.|++.|+.|||++  
T Consensus       145 ~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--  222 (370)
T 2psq_A          145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ--  222 (370)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             CCCCEeeEEEEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC--
Confidence            79999999999998777777777776665544433221             123478899999999999999999999  


Q ss_pred             CCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           69 PSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        69 ~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                       +++|+||+++|          ++|||+++...............+|+.|+||
T Consensus       223 -~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aP  274 (370)
T 2psq_A          223 -KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP  274 (370)
T ss_dssp             -TEECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCH
T ss_pred             -CeeccccchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECH
Confidence             99999999999          4899998865543322112334567889987

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.79  E-value=3.7e-19  Score=105.05  Aligned_cols=108  Identities=35%  Similarity=0.614  Sum_probs=82.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCC-CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQ-PSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~   79 (111)
                      ++||||+++++++...+....+++++..+++...+.... ....+++.++..++.|++.|+.|+|++   +++|+|++|+
T Consensus        92 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~  168 (321)
T 2qkw_B           92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSI  168 (321)
T ss_dssp             CCCTTBCCEEEECCCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCST
T ss_pred             CCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHH
Confidence            579999999999998776667777777666665554332 223488999999999999999999999   9999999999


Q ss_pred             C----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           80 N----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |          ++|||.++...............||..|+||
T Consensus       169 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aP  210 (321)
T 2qkw_B          169 NILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDP  210 (321)
T ss_dssp             TEEECTTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCH
T ss_pred             HEEECCCCCEEEeecccccccccccccccccccCCCccccCH
Confidence            9          4899988754433222112334578899987

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.79  E-value=3.4e-20  Score=111.66  Aligned_cols=103  Identities=22%  Similarity=0.201  Sum_probs=79.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.+.+...++.+++..+++...+..   ...++..++..++.|++.|+.|+|++   +++|||++|+|
T Consensus        96 ~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~N  169 (373)
T 2r5t_A           96 VKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQR---ERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPEN  169 (373)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGG
T ss_pred             CCCCCCCCEEEEEEeCCEEEEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHH
Confidence            4799999999999987766666666665554433322   22388899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++........  ..+.+||+.|+||
T Consensus       170 Ill~~~g~ikL~DFG~a~~~~~~~~~--~~~~~gt~~y~aP  208 (373)
T 2r5t_A          170 ILLDSQGHIVLTDFGLCKENIEHNST--TSTFCGTPEYLAP  208 (373)
T ss_dssp             EEECTTSCEEECCCCBCGGGBCCCCC--CCSBSCCCCCCCH
T ss_pred             EEECCCCCEEEeeCccccccccCCCc--cccccCCccccCH
Confidence                      4899998754332222  3456899999997

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.79  E-value=4.6e-20  Score=113.19  Aligned_cols=103  Identities=21%  Similarity=0.182  Sum_probs=78.8

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHE-KVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~-~~~~~i~h~~l~~~   79 (111)
                      ++||||++++++|...+...++++++..+.+...+..   ...+++.++..++.|++.|+.|||+ .   +++|+|++|+
T Consensus       205 l~h~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~  278 (446)
T 4ejn_A          205 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR---ERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLE  278 (446)
T ss_dssp             CSCTTSCCEEEEEEETTEEEEEECCCSSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGG
T ss_pred             CCCCeEeeEEEEEeeCCEEEEEEeeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHH
Confidence            5799999999999987766666677665554433322   2238899999999999999999998 8   9999999999


Q ss_pred             C----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           80 N----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |          ++|||+++........  .....||+.|+||
T Consensus       279 NIll~~~~~~kl~DFG~a~~~~~~~~~--~~~~~gt~~y~aP  318 (446)
T 4ejn_A          279 NLMLDKDGHIKITDFGLCKEGIKDGAT--MKTFCGTPEYLAP  318 (446)
T ss_dssp             GEEECSSSCEEECCCCCCCTTCC-------CCSSSCGGGCCH
T ss_pred             HEEECCCCCEEEccCCCceeccCCCcc--cccccCCccccCH
Confidence            9          4899998764433222  3456799999998

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.79  E-value=5.8e-20  Score=109.68  Aligned_cols=102  Identities=23%  Similarity=0.217  Sum_probs=79.4

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +||||+++++++.+.+...++.+++..+++...+..   ...+++.++..++.|++.|+.|+|++   +++|+|++|+| 
T Consensus        68 ~hp~iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NI  141 (345)
T 3a8x_A           68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNV  141 (345)
T ss_dssp             TCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGE
T ss_pred             CCCccCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHE
Confidence            799999999999987766666666665554433322   22388999999999999999999999   99999999999 


Q ss_pred             ---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                               ++|||+++........  ..+.+||+.|+||
T Consensus       142 ll~~~g~~kL~DFG~a~~~~~~~~~--~~~~~gt~~y~aP  179 (345)
T 3a8x_A          142 LLDSEGHIKLTDYGMCKEGLRPGDT--TSTFCGTPNYIAP  179 (345)
T ss_dssp             EECTTSCEEECCGGGCBCSCCTTCC--BCCCCSCGGGCCH
T ss_pred             EECCCCCEEEEeccccccccCCCCc--ccccCCCccccCc
Confidence                     4899998764333222  3456899999997

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.79  E-value=8.2e-20  Score=111.16  Aligned_cols=103  Identities=15%  Similarity=0.125  Sum_probs=81.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||++++++|.+.....++++++..+++...+..    ..++...+..++.|++.|+.|+|++   +++|||+||+|
T Consensus       126 l~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~----~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~N  198 (410)
T 3v8s_A          126 ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDN  198 (410)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred             CCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHH
Confidence            5799999999999987766677777766665544422    2388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++........ ...+.+||+.|+||
T Consensus       199 ILl~~~g~ikL~DFG~a~~~~~~~~~-~~~~~~gt~~Y~AP  238 (410)
T 3v8s_A          199 MLLDKSGHLKLADFGTCMKMNKEGMV-RCDTAVGTPDYISP  238 (410)
T ss_dssp             EEECTTSCEEECCCTTCEECCTTSEE-ECCSCCSCGGGCCH
T ss_pred             eeECCCCCEEEeccceeEeeccCCcc-cccCCcCCccccCH
Confidence                      4899998766443221 13456899999998

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.78  E-value=1.5e-19  Score=106.20  Aligned_cols=106  Identities=26%  Similarity=0.414  Sum_probs=80.1

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.+.+...++++++..+++...+...  ...+++.++..++.|++.|+.|+|+.   +++|+|++++|
T Consensus        64 l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~N  138 (310)
T 3s95_A           64 LEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSM--DSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHN  138 (310)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHC--CTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTS
T ss_pred             CCCcCcccEEEEEecCCeeEEEEEecCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCe
Confidence            58999999999999887777777777766665554432  23388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccc------------cccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARL------------HSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~------------~~~~~~~~~~~~aP  111 (111)
                                ++|||.+..........            ......||+.|+||
T Consensus       139 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  191 (310)
T 3s95_A          139 CLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP  191 (310)
T ss_dssp             EEECTTSCEEECCCTTCEECC--------------------CCCCSCGGGCCH
T ss_pred             EEECCCCCEEEeecccceecccccccccccccccccccccccccCCCcceeCH
Confidence                      48999987654332210            01145789999987

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.78  E-value=1.7e-19  Score=108.25  Aligned_cols=102  Identities=21%  Similarity=0.272  Sum_probs=79.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.+.....++.+++..+++...+..   ...+++..+..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        72 l~hpnIv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~N  145 (361)
T 2yab_A           72 VLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPEN  145 (361)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTT---CSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred             CCCcCCCcEEEEEEeCCEEEEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHH
Confidence            5799999999999987766666676666555544432   23489999999999999999999999   99999999999


Q ss_pred             c--------------CCCcccccCCCCcccccccccCccccccCC
Q 047898           81 I--------------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 i--------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |              +|||++........   .....||+.|+||
T Consensus       146 Ill~~~~~~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aP  187 (361)
T 2yab_A          146 IMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FKNIFGTPEFVAP  187 (361)
T ss_dssp             EEESCTTSSSCCEEECCCSSCEECCTTCC---CCCCCSCGGGCCH
T ss_pred             EEEeCCCCCccCEEEEecCCceEcCCCCc---cccCCCCccEECc
Confidence            3              68888876543321   2445789999997

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.78  E-value=1.4e-19  Score=106.04  Aligned_cols=102  Identities=25%  Similarity=0.348  Sum_probs=81.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+...++++++..+++...+..    ..++..++..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        74 l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~N  146 (297)
T 3fxz_A           74 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDN  146 (297)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred             CCCCCCCeEeEEEEECCEEEEEEECCCCCCHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHH
Confidence            5899999999999988776677777766655544432    2388899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||++.........  .....||+.|+||
T Consensus       147 il~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aP  185 (297)
T 3fxz_A          147 ILLGMDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAP  185 (297)
T ss_dssp             EEECTTCCEEECCCTTCEECCSTTCC--BCCCCSCGGGCCH
T ss_pred             EEECCCCCEEEeeCCCceecCCcccc--cCCccCCcCccCh
Confidence                      4899988765543322  3456789999987

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.78  E-value=2.2e-19  Score=107.75  Aligned_cols=102  Identities=21%  Similarity=0.305  Sum_probs=79.3

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.+.+...++++++..+.+...+..   ...+++..+..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        85 l~hpnIv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~N  158 (362)
T 2bdw_A           85 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA---REFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPEN  158 (362)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTT---CSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGG
T ss_pred             CCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHH
Confidence            5899999999999987766666666665554433332   23388999999999999999999999   99999999999


Q ss_pred             -------------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 -------------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 -------------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                   ++|||++........   .....||+.|+||
T Consensus       159 Ill~~~~~~~~~kl~DfG~a~~~~~~~~---~~~~~gt~~y~aP  199 (362)
T 2bdw_A          159 LLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAGTPGYLSP  199 (362)
T ss_dssp             EEESCSSTTCCEEECCCTTCBCCTTCCS---CCCSCSCTTTCCH
T ss_pred             EEEecCCCCCCEEEeecCcceEecCCcc---cccCCCCccccCH
Confidence                         378998876543322   2345789999997

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.78  E-value=1.9e-19  Score=105.63  Aligned_cols=108  Identities=34%  Similarity=0.578  Sum_probs=82.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+...++++++..+.+...+........+++..+..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        87 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~N  163 (307)
T 2nru_A           87 CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSAN  163 (307)
T ss_dssp             CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGG
T ss_pred             cCCCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHH
Confidence            579999999999998776666777776665555444333334589999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.++...............|+..|+||
T Consensus       164 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aP  204 (307)
T 2nru_A          164 ILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAP  204 (307)
T ss_dssp             EEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCH
T ss_pred             EEEcCCCcEEEeecccccccccccccccccccCCCcCcCCh
Confidence                      4899988765443322223345688999987

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.78  E-value=2.2e-19  Score=106.27  Aligned_cols=103  Identities=20%  Similarity=0.190  Sum_probs=79.5

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.+.+...++++++..+++...+..  ....+++.++..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        58 l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~N  132 (321)
T 1tki_A           58 ARHRNILHLHESFESMEELVMIFEFISGLDIFERINT--SAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPEN  132 (321)
T ss_dssp             SCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTS--SSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGG
T ss_pred             CCCCCCCeEeEEEecCCEEEEEEEeCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHH
Confidence            5799999999999987766666666665555444432  222488999999999999999999999   99999999999


Q ss_pred             ------------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ------------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ------------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                  ++|||.+........   .....+|+.|+||
T Consensus       133 Il~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aP  172 (321)
T 1tki_A          133 IIYQTRRSSTIKIIEFGQARQLKPGDN---FRLLFTAPEYYAP  172 (321)
T ss_dssp             EEESSSSCCCEEECCCTTCEECCTTCE---EEEEESCGGGSCH
T ss_pred             EEEccCCCCCEEEEECCCCeECCCCCc---cccccCChhhcCc
Confidence                        378998876644322   2345688899987

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.78  E-value=2.8e-19  Score=111.91  Aligned_cols=106  Identities=20%  Similarity=0.236  Sum_probs=82.8

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCC-CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQ-PSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~   79 (111)
                      ++||||+++++++.+.....++++++..+++...+.... ....+++..+..++.|++.|+.|+|++   +++|||++|+
T Consensus       242 l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~  318 (543)
T 3c4z_A          242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPE  318 (543)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGG
T ss_pred             cCCCCEeeEEEEEeeCCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChH
Confidence            579999999999998776666777776666544433222 233489999999999999999999999   9999999999


Q ss_pred             C----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           80 N----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |          ++|||+++........  ....+||+.|+||
T Consensus       319 NILl~~~g~vkL~DFGla~~~~~~~~~--~~~~~GT~~Y~AP  358 (543)
T 3c4z_A          319 NVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAP  358 (543)
T ss_dssp             GEEECTTSCEEECCCTTCEECCTTCCC--BCCCCSCTTTSCH
T ss_pred             HEEEeCCCCEEEeecceeeeccCCCcc--cccccCCccccCh
Confidence            9          4899999866543322  3445899999998

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.78  E-value=1.1e-19  Score=110.69  Aligned_cols=105  Identities=14%  Similarity=0.076  Sum_probs=81.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||++++++|.+.+...++++++..+++...+...  ...+++..+..++.|++.|+.|+|++   +++|||+||+|
T Consensus       118 ~~hp~Iv~l~~~~~~~~~~~lVmE~~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~N  192 (412)
T 2vd5_A          118 GDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKF--GERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDN  192 (412)
T ss_dssp             SCTTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHH--SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred             cCCCCeeeEEEEEeeCCEEEEEEcCCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHH
Confidence            47999999999999877666677777666555444321  12388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++........ .....+||+.|+||
T Consensus       193 ILld~~g~vkL~DFGla~~~~~~~~~-~~~~~~Gt~~Y~AP  232 (412)
T 2vd5_A          193 ILLDRCGHIRLADFGSCLKLRADGTV-RSLVAVGTPDYLSP  232 (412)
T ss_dssp             EEECTTSCEEECCCTTCEECCTTSCE-ECSSCCSCGGGCCH
T ss_pred             eeecCCCCEEEeechhheeccCCCcc-ccceeccccCcCCH
Confidence                      4899998766543221 12346799999998

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.78  E-value=1.6e-19  Score=106.70  Aligned_cols=100  Identities=24%  Similarity=0.311  Sum_probs=78.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.+.....++.+++..+++...+..   ...++...+..++.|++.|+.|+|++   +++|+|++|+|
T Consensus        63 l~hp~Iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~N  136 (318)
T 1fot_A           63 VTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRK---SQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPEN  136 (318)
T ss_dssp             CCBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH---TSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGG
T ss_pred             CCCCCCceEeEEEEeCCEEEEEEeCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhe
Confidence            5799999999999987766666666665555444432   23388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++.....     ..+..||+.|+||
T Consensus       137 Ill~~~g~~kL~Dfg~a~~~~~~-----~~~~~gt~~y~aP  172 (318)
T 1fot_A          137 ILLDKNGHIKITDFGFAKYVPDV-----TYTLCGTPDYIAP  172 (318)
T ss_dssp             EEECTTSCEEECCCSSCEECSSC-----BCCCCSCTTTCCH
T ss_pred             EEEcCCCCEEEeecCcceecCCc-----cccccCCccccCH
Confidence                      4899998765432     2345789999987

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.78  E-value=2.5e-19  Score=112.71  Aligned_cols=104  Identities=21%  Similarity=0.221  Sum_probs=81.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.+.+...++++++..+++...+... ....+++.++..++.|++.|+.|||++   +++|||++|+|
T Consensus       241 l~hp~Iv~l~~~~~~~~~l~lVmEy~~gg~L~~~l~~~-~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeN  316 (576)
T 2acx_A          241 VNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHM-GQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPEN  316 (576)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHSS-SSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGG
T ss_pred             cCCCCEeeEEEEEeeCCEEEEEEEcCCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchhe
Confidence            58999999999999877666677777666554444332 223389999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||++........   ....+||+.|+||
T Consensus       317 ILld~~g~vKL~DFGla~~~~~~~~---~~~~~GT~~Y~AP  354 (576)
T 2acx_A          317 ILLDDHGHIRISDLGLAVHVPEGQT---IKGRVGTVGYMAP  354 (576)
T ss_dssp             EEECTTSCEEECCCTTCEECCTTCC---EECCCSCGGGCCH
T ss_pred             EEEeCCCCeEEEecccceecccCcc---ccccCCCccccCH
Confidence                      489999876644322   2345799999997

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.78  E-value=2.4e-19  Score=106.88  Aligned_cols=102  Identities=19%  Similarity=0.269  Sum_probs=78.7

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCc
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI   81 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~ni   81 (111)
                      +||||+++++++.+.....++.+++..+++...+..   ...+++.++..++.|++.|+.|+|+.   +++|+|++|+||
T Consensus        74 ~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~i~~---~~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NI  147 (342)
T 2qr7_A           74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILR---QKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNI  147 (342)
T ss_dssp             TSTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHT---CTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGE
T ss_pred             CCCCcCeEEEEEEcCCEEEEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHE
Confidence            699999999999987766666666665554444332   23489999999999999999999999   999999999993


Q ss_pred             --------------CCCcccccCCCCcccccccccCccccccCC
Q 047898           82 --------------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        82 --------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                    +|||++.........  ..+..+|+.|+||
T Consensus       148 l~~~~~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aP  189 (342)
T 2qr7_A          148 LYVDESGNPESIRICDFGFAKQLRAENGL--LMTPCYTANFVAP  189 (342)
T ss_dssp             EESSSSCSGGGEEECCCTTCEECBCTTCC--BCCSSCCSSCCCH
T ss_pred             EEecCCCCcCeEEEEECCCcccCcCCCCc--eeccCCCccccCH
Confidence                          688888765433222  3455789999997

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.78  E-value=3.7e-19  Score=110.03  Aligned_cols=102  Identities=23%  Similarity=0.291  Sum_probs=80.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.+.+...++.+++..+++...+..   ...++..++..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        73 l~HpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~N  146 (476)
T 2y94_A           73 FRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICK---NGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPEN  146 (476)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEEECCSSEEHHHHTTS---SSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGG
T ss_pred             CCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHH
Confidence            5799999999999987766666677666555544432   23489999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||++........   ..+.+||+.|+||
T Consensus       147 Ill~~~~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aP  184 (476)
T 2y94_A          147 VLLDAHMNAKIADFGLSNMMSDGEF---LRTSCGSPNYAAP  184 (476)
T ss_dssp             EEECTTCCEEECCCSSCEECCTTCC---BCCCCSCSTTCCH
T ss_pred             EEEecCCCeEEEeccchhhcccccc---ccccCCCcCeECh
Confidence                      489999876543321   3455789999987

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.77  E-value=1.2e-19  Score=107.49  Aligned_cols=103  Identities=22%  Similarity=0.262  Sum_probs=75.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+...++++++..+.+...+..   ...++...+..++.|++.|+.|+|++   +++|+|++|+|
T Consensus        78 l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~N  151 (327)
T 3a62_A           78 VKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLER---EGIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPEN  151 (327)
T ss_dssp             CCCTTBCCEEEEEECSSCEEEEEECCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTT
T ss_pred             CCCCCccceeEEEEcCCEEEEEEeCCCCCcHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHH
Confidence            5799999999999987766666677665554433322   22378889999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++........  .....||+.|+||
T Consensus       152 ill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aP  190 (327)
T 3a62_A          152 IMLNHQGHVKLTDFGLCKESIHDGTV--THTFCGTIEYMAP  190 (327)
T ss_dssp             EEECTTSCEEECCCSCC------------CTTSSCCTTSCH
T ss_pred             eEECCCCcEEEEeCCcccccccCCcc--ccccCCCcCccCH
Confidence                      4899988754333221  3445789999987

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.77  E-value=1.1e-19  Score=108.70  Aligned_cols=106  Identities=21%  Similarity=0.261  Sum_probs=79.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCC-CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGA-QPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~   79 (111)
                      ++||||+++++++...+...++++++..+++...+... .....+++..+..++.|++.|+.|+|++   +++|+|++|+
T Consensus        83 l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~  159 (351)
T 3c0i_A           83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPH  159 (351)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGG
T ss_pred             CCCCCCCcEEEEEEeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChH
Confidence            58999999999999877666666666655443222211 1223378899999999999999999999   9999999999


Q ss_pred             C-------------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           80 N-------------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n-------------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |             ++|||++.........  .....||+.|+||
T Consensus       160 NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aP  202 (351)
T 3c0i_A          160 CVLLASKENSAPVKLGGFGVAIQLGESGLV--AGGRVGTPHFMAP  202 (351)
T ss_dssp             GEEECSSSTTCCEEECCCTTCEECCTTSCB--CCCCCSCGGGCCH
T ss_pred             HeEEecCCCCCcEEEecCcceeEecCCCee--ecCCcCCcCccCH
Confidence            9             3789988766543221  3345789999997

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.77  E-value=1.7e-19  Score=106.79  Aligned_cols=105  Identities=21%  Similarity=0.326  Sum_probs=75.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.+.. ...+++++..+++...+...  ...+++..+..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        72 l~h~~iv~~~~~~~~~~-~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~N  145 (325)
T 3kex_A           72 LDHAHIVRLLGLCPGSS-LQLVTQYLPLGSLLDHVRQH--RGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARN  145 (325)
T ss_dssp             CCCTTBCCEEEEECBSS-EEEEEECCTTCBSHHHHHSS--GGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTT
T ss_pred             CCCCCcCeEEEEEcCCc-cEEEEEeCCCCCHHHHHHHc--cccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchhe
Confidence            58999999999987533 44555666655554444332  12378888999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.++...............++..|+||
T Consensus       146 il~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aP  186 (325)
T 3kex_A          146 VLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMAL  186 (325)
T ss_dssp             EEESSSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCH
T ss_pred             EEECCCCeEEECCCCcccccCcccccccccCCCCcccccCh
Confidence                      4899999876554332223445677789887

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.77  E-value=4.3e-19  Score=107.37  Aligned_cols=103  Identities=20%  Similarity=0.232  Sum_probs=80.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.+.....++++++..+++...+...  ...+++.++..++.|++.|+.|+|++   +++|+|++|+|
T Consensus       105 l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~N  179 (387)
T 1kob_A          105 LHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAE--DYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPEN  179 (387)
T ss_dssp             CCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCT--TCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGG
T ss_pred             CCCcCCCeEEEEEEeCCEEEEEEEcCCCCcHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHH
Confidence            58999999999999877666666766665554444322  22489999999999999999999999   99999999999


Q ss_pred             ------------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ------------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ------------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                  ++|||+++.......   .....||+.|+||
T Consensus       180 Ill~~~~~~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aP  219 (387)
T 1kob_A          180 IMCETKKASSVKIIDFGLATKLNPDEI---VKVTTATAEFAAP  219 (387)
T ss_dssp             EEESSTTCCCEEECCCTTCEECCTTSC---EEEECSSGGGCCH
T ss_pred             eEEecCCCCceEEEecccceecCCCcc---eeeeccCCCccCc
Confidence                        378998876644322   2334689999987

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.77  E-value=5e-20  Score=108.49  Aligned_cols=106  Identities=25%  Similarity=0.384  Sum_probs=72.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC--eeecCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPS--IIQRDIRS   78 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~--i~h~~l~~   78 (111)
                      ++||||+++++++.......++.+++..+++...+........+++.++..++.|++.|+.|+|+.   +  ++|+|+++
T Consensus        91 l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp  167 (309)
T 3p86_A           91 LRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKS  167 (309)
T ss_dssp             CCCTTBCCEEEEECSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCG
T ss_pred             CCCCCEeeEEEEEEECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCCh
Confidence            579999999999998776666777776666555544322222388899999999999999999999   8  99999999


Q ss_pred             CC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           79 SN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        79 ~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +|          ++|||+++........  .....||+.|+||
T Consensus       168 ~NIll~~~~~~kL~Dfg~a~~~~~~~~~--~~~~~gt~~y~aP  208 (309)
T 3p86_A          168 PNLLVDKKYTVKVCDFGLSRLKASTFLS--SKSAAGTPEWMAP  208 (309)
T ss_dssp             GGEEECTTCCEEECCCC-------------------CCTTSCH
T ss_pred             hhEEEeCCCcEEECCCCCCccccccccc--cccCCCCccccCh
Confidence            99          4899998754333221  3345788999987

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.77  E-value=2.3e-19  Score=106.80  Aligned_cols=101  Identities=23%  Similarity=0.255  Sum_probs=77.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+...++.+++ .+.+...+..   ...+++.++..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        66 l~hpnIv~l~~~~~~~~~~~lv~E~~-~g~l~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~N  138 (336)
T 3h4j_B           66 LRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVE---KKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPEN  138 (336)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEECCC-CEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTT
T ss_pred             CCCCCCCeEEEEEEeCCEEEEEEECC-CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhh
Confidence            58999999999999877665565665 3333322221   22388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||++........   ..+.+||+.|+||
T Consensus       139 Ill~~~~~~kl~DFG~s~~~~~~~~---~~~~~gt~~y~aP  176 (336)
T 3h4j_B          139 LLLDDNLNVKIADFGLSNIMTDGNF---LKTSCGSPNYAAP  176 (336)
T ss_dssp             EEECTTCCEEECCSSCTBTTTTSBT---TCCCTTSTTTSCG
T ss_pred             EEEcCCCCEEEEEeccceeccCCcc---cccccCCcCcCCH
Confidence                      489999876544322   3455789999998

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.77  E-value=4.5e-19  Score=103.49  Aligned_cols=103  Identities=21%  Similarity=0.251  Sum_probs=76.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.+.+...++++++...... ....  ....++..++..++.|++.|+.|+|++   +++|+|++++|
T Consensus        58 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~-~~~~--~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~N  131 (292)
T 3o0g_A           58 LKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKK-YFDS--CNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQN  131 (292)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEEECCSEEHHH-HHHH--TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred             CCCCCEeeEEeEEEeCCEEEEEEecCCCCHHH-HHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHH
Confidence            57999999999999877666666665532211 1111  123389999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+.........  .....+|..|+||
T Consensus       132 il~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~t~~y~aP  170 (292)
T 3o0g_A          132 LLINRNGELKLANFGLARAFGIPVRC--YSAEVVTLWYRPP  170 (292)
T ss_dssp             EEECTTSCEEECCCTTCEECCSCCSC--CCSCCSCGGGCCH
T ss_pred             EEEcCCCCEEEeecccceecCCcccc--ccCCccccCCcCh
Confidence                      4899998765433222  3345678889987

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.77  E-value=1.7e-18  Score=101.26  Aligned_cols=102  Identities=30%  Similarity=0.364  Sum_probs=76.0

Q ss_pred             CCCccceeeeeeeeeCC--ccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 047898            1 LKHENLVELLGYCVEGN--LRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRS   78 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~   78 (111)
                      ++||||+++++++....  ...++++++..+.+....    ....+++.++..++.|++.|+.|+|+.   +++|+|++|
T Consensus        93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp  165 (298)
T 2zv2_A           93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP----TLKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKP  165 (298)
T ss_dssp             CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS----CSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCG
T ss_pred             CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCH
Confidence            57999999999998633  233444555444443322    223489999999999999999999999   999999999


Q ss_pred             CC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           79 SN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        79 ~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +|          ++|||+++........  .....||+.|+||
T Consensus       166 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aP  206 (298)
T 2zv2_A          166 SNLLVGEDGHIKIADFGVSNEFKGSDAL--LSNTVGTPAFMAP  206 (298)
T ss_dssp             GGEEECTTSCEEECCCTTCEECSSSSCE--ECCCCSCGGGCCG
T ss_pred             HHEEECCCCCEEEecCCCcccccccccc--ccCCcCCccccCh
Confidence            99          4899998766543322  2345789999998

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.77  E-value=1.9e-19  Score=107.76  Aligned_cols=102  Identities=23%  Similarity=0.179  Sum_probs=79.3

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +||+|+++++++.+.+...++.+++..+++...+..   ...+++.++..++.|++.|+.|+|++   +++|||++|+| 
T Consensus        79 ~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NI  152 (353)
T 2i0e_A           79 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ---VGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNV  152 (353)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGE
T ss_pred             CCCEEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHE
Confidence            699999999999987766666666665554443322   12388999999999999999999999   99999999999 


Q ss_pred             ---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                               ++|||+++........  ....+||+.|+||
T Consensus       153 ll~~~g~vkL~DFG~a~~~~~~~~~--~~~~~gt~~y~aP  190 (353)
T 2i0e_A          153 MLDSEGHIKIADFGMCKENIWDGVT--TKTFCGTPDYIAP  190 (353)
T ss_dssp             EECTTSCEEECCCTTCBCCCCTTCC--BCCCCSCGGGCCH
T ss_pred             EEcCCCcEEEEeCCcccccccCCcc--cccccCCccccCh
Confidence                     4899998764333222  3456899999997

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.77  E-value=9.9e-20  Score=109.70  Aligned_cols=106  Identities=25%  Similarity=0.337  Sum_probs=78.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+...++.+++..+++...+...  ...++..++..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus       169 l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~N  243 (377)
T 3cbl_A          169 YSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTE--GARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARN  243 (377)
T ss_dssp             CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred             CCCCCEEEEEEEEecCCCcEEEEEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHH
Confidence            57999999999999877666777777666555444321  12378899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++...............++..|+||
T Consensus       244 il~~~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aP  284 (377)
T 3cbl_A          244 CLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAP  284 (377)
T ss_dssp             EEECTTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCH
T ss_pred             EEEcCCCcEEECcCCCceecCCCceeecCCCCCCCcCcCCH
Confidence                      4899998765433221111122356779987

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.77  E-value=5.2e-19  Score=104.79  Aligned_cols=102  Identities=20%  Similarity=0.227  Sum_probs=79.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.......++++++..+++...+..   ...+++.++..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        71 l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~N  144 (326)
T 2y0a_A           71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPEN  144 (326)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTT---SSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGG
T ss_pred             CCCCCCCcEEEEEEeCCEEEEEEEcCCCCCHHHHHHh---cCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHH
Confidence            5799999999999987766666676666555554432   23489999999999999999999999   99999999999


Q ss_pred             c--------------CCCcccccCCCCcccccccccCccccccCC
Q 047898           81 I--------------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 i--------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |              +|||.+........   .....||+.|+||
T Consensus       145 Ill~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aP  186 (326)
T 2y0a_A          145 IMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAP  186 (326)
T ss_dssp             EEESCSSSSSCCEEECCCTTCEECCTTSC---CCCCCSCTTTCCH
T ss_pred             EEEecCCCCCCCEEEEECCCCeECCCCCc---cccccCCcCcCCc
Confidence            3              68888876543221   2345689999987

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.77  E-value=1.3e-19  Score=107.36  Aligned_cols=105  Identities=17%  Similarity=0.290  Sum_probs=76.1

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||++++++|..+. ...+++++..+.+...+...  ...+++..+..++.|++.|+.|+|+.   +++|+|+||+|
T Consensus        74 l~h~~iv~~~~~~~~~~-~~~v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~N  147 (327)
T 3poz_A           74 VDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARN  147 (327)
T ss_dssp             CCBTTBCCEEEEEESSS-EEEEEECCTTCBHHHHHHHS--TTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGG
T ss_pred             CCCCCEeEEEEEEecCC-eEEEEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChhe
Confidence            58999999999998755 44555666665555444332  23388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++...............+|..|+||
T Consensus       148 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP  188 (327)
T 3poz_A          148 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL  188 (327)
T ss_dssp             EEEEETTEEEECCTTHHHHHTTTCC-------CCCGGGSCH
T ss_pred             EEECCCCCEEEccCcceeEccCCcccccccCCCccccccCh
Confidence                      4899998765443332222334567789987

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.76  E-value=6.8e-19  Score=103.67  Aligned_cols=103  Identities=24%  Similarity=0.282  Sum_probs=76.1

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.+.....++++++.. .+...+..  ....++..++..++.|++.|+.|+|++   +++|+|++|+|
T Consensus        76 l~hp~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~N  149 (311)
T 3niz_A           76 LHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDE--NKTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQN  149 (311)
T ss_dssp             CCCTTBCCEEEEECCSSCEEEEEECCSE-EHHHHHHT--CTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGG
T ss_pred             cCCCCEeeeeeEEccCCEEEEEEcCCCC-CHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHh
Confidence            5899999999999887655566666553 22222222  223388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.++........  .....+|..|+||
T Consensus       150 Il~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~t~~y~aP  188 (311)
T 3niz_A          150 LLINSDGALKLADFGLARAFGIPVRS--YTHEVVTLWYRAP  188 (311)
T ss_dssp             EEECTTCCEEECCCTTCEETTSCCC-----CCCCCCTTCCH
T ss_pred             EEECCCCCEEEccCcCceecCCCccc--ccCCcccCCcCCH
Confidence                      4899998765433222  2345678889987

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.76  E-value=4.8e-19  Score=109.96  Aligned_cols=106  Identities=22%  Similarity=0.298  Sum_probs=81.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||++++++|...+...++++++..+++...+.... ...+++..+..++.|++.|+.|||++   +++|+||+++|
T Consensus       273 l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~N  348 (495)
T 1opk_A          273 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARN  348 (495)
T ss_dssp             CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred             cCCCCEeeEEEEEecCCcEEEEEEccCCCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhh
Confidence            589999999999998777777777777666655554322 23388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++........ ......++..|+||
T Consensus       349 Ill~~~~~~kl~DFG~a~~~~~~~~~-~~~~~~~~~~y~aP  388 (495)
T 1opk_A          349 CLVGENHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTAP  388 (495)
T ss_dssp             EEECGGGCEEECCTTCEECCTTCCEE-CCTTCCCCGGGCCH
T ss_pred             EEECCCCcEEEeecccceeccCCcee-ecCCCcCCcceeCH
Confidence                      4899999876443221 12233456789987

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.76  E-value=3.3e-19  Score=107.36  Aligned_cols=103  Identities=20%  Similarity=0.229  Sum_probs=79.8

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+...++++++..+.+...+...  ...+++.++..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus       143 l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~N  217 (373)
T 2x4f_A          143 LDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDE--SYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPEN  217 (373)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEEECCTTCEEHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGG
T ss_pred             CCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHH
Confidence            58999999999999877666777777665554433221  22378899999999999999999999   99999999999


Q ss_pred             ------------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ------------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ------------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                  ++|||+++.......   .....||+.|+||
T Consensus       218 Ill~~~~~~~~kl~DFG~a~~~~~~~~---~~~~~gt~~y~aP  257 (373)
T 2x4f_A          218 ILCVNRDAKQIKIIDFGLARRYKPREK---LKVNFGTPEFLAP  257 (373)
T ss_dssp             EEEEETTTTEEEECCCSSCEECCTTCB---CCCCCSSCTTCCH
T ss_pred             EEEecCCCCcEEEEeCCCceecCCccc---cccccCCCcEeCh
Confidence                        379998876544322   2345689999987

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.76  E-value=1e-18  Score=103.31  Aligned_cols=102  Identities=25%  Similarity=0.331  Sum_probs=80.8

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+...++++++..+.+...+..    ..+++.++..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        99 l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~N  171 (321)
T 2c30_A           99 YQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ----VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDS  171 (321)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred             CCCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHH
Confidence            5799999999999988776677777766655544322    2389999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||++.........  .....||+.|+||
T Consensus       172 Ill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aP  210 (321)
T 2c30_A          172 ILLTLDGRVKLSDFGFCAQISKDVPK--RKSLVGTPYWMAP  210 (321)
T ss_dssp             EEECTTCCEEECCCTTCEECCSSSCC--BCCCCSCGGGCCH
T ss_pred             EEECCCCcEEEeeeeeeeecccCccc--cccccCCccccCH
Confidence                      4899988765543222  2445789999987

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.76  E-value=2.9e-19  Score=114.29  Aligned_cols=102  Identities=23%  Similarity=0.183  Sum_probs=80.5

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +||+|+++++++.+.+...++++++..+++...+...   ..+++.++..++.|++.|+.|||+.   +++||||||+| 
T Consensus       400 ~~~~i~~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NI  473 (674)
T 3pfq_A          400 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNV  473 (674)
T ss_dssp             CCTTBCCEEEECBCSSEEEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTE
T ss_pred             CCCeEEEEEEEEEeCCEEEEEEeCcCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhE
Confidence            6899999999999877666677777665554444322   2389999999999999999999999   99999999999 


Q ss_pred             ---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                               |+|||+++........  ..+.+||+.|+||
T Consensus       474 Ll~~~g~ikL~DFGla~~~~~~~~~--~~~~~GT~~Y~AP  511 (674)
T 3pfq_A          474 MLDSEGHIKIADFGMCKENIWDGVT--TKTFCGTPDYIAP  511 (674)
T ss_dssp             EECSSSCEEECCCTTCEECCCTTCC--BCCCCSCSSSCCH
T ss_pred             EEcCCCcEEEeecceeeccccCCcc--cccccCCCcccCH
Confidence                     4899998754333222  4557899999998

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.76  E-value=4.4e-19  Score=105.07  Aligned_cols=106  Identities=20%  Similarity=0.264  Sum_probs=77.5

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.+.+...++++++..+++...+...  ...+++.++..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus       107 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~N  181 (325)
T 3kul_A          107 FDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTH--DGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARN  181 (325)
T ss_dssp             CCCTTBCCEEEEECGGGCCEEEEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred             CCCCCCCcEEEEEEeCCccEEEeeCCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcce
Confidence            58999999999998876666666777666665554332  22389999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCccccc-ccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLH-STRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~-~~~~~~~~~~~aP  111 (111)
                                ++|||.++.......... .....+|+.|+||
T Consensus       182 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aP  223 (325)
T 3kul_A          182 VLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAP  223 (325)
T ss_dssp             EEECTTCCEEECCCSSCEECC----CCEECC---CCGGGSCH
T ss_pred             EEECCCCCEEECCCCcccccccCccceeeccCCCCcccccCH
Confidence                      489999886654322211 2223456789887

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.76  E-value=7e-19  Score=103.82  Aligned_cols=105  Identities=21%  Similarity=0.284  Sum_probs=79.1

Q ss_pred             CCCccceeeeeeeeeCCc--cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 047898            1 LKHENLVELLGYCVEGNL--RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRS   78 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~   78 (111)
                      ++||||+++++++.....  ..++++++..+++...+........+++.++..++.|++.|+.|+|+.   +++|+|++|
T Consensus        64 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp  140 (319)
T 4euu_A           64 LNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKP  140 (319)
T ss_dssp             CCCTTBCCEEEEEECTTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSG
T ss_pred             cCCCCcceEEEEeecCCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCH
Confidence            579999999999986552  245556665555555544433333489999999999999999999999   999999999


Q ss_pred             CCc--------------CCCcccccCCCCcccccccccCccccccCC
Q 047898           79 SNI--------------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        79 ~ni--------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +||              +|||.++.......   .....+|..|+||
T Consensus       141 ~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aP  184 (319)
T 4euu_A          141 GNIMRVIGEDGQSVYKLTDFGAARELEDDEQ---FVSLYGTEEYLHP  184 (319)
T ss_dssp             GGEEEEECTTSCEEEEECCCTTCEECCTTCC---BCCCCSCGGGCCH
T ss_pred             HHEEEeccCCCCceEEEccCCCceecCCCCc---eeecccCCCccCH
Confidence            993              78998876544332   2345688899987

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.76  E-value=3.9e-19  Score=105.29  Aligned_cols=102  Identities=17%  Similarity=0.208  Sum_probs=68.3

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +||||+++++++.+.....++++++..+++...+..   ...+++.++..++.|++.|+.|+|++   +++|+|++|+| 
T Consensus        64 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NI  137 (325)
T 3kn6_A           64 GHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKK---KKHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENL  137 (325)
T ss_dssp             TCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGE
T ss_pred             CCCCeeEEEEEEEcCCEEEEEEEccCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHE
Confidence            399999999999987766666676665555444432   23489999999999999999999999   99999999999 


Q ss_pred             ------------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ------------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ------------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                  ++|||+++........  .....+|..|+||
T Consensus       138 ll~~~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~t~~y~aP  178 (325)
T 3kn6_A          138 LFTDENDNLEIKIIDFGFARLKPPDNQP--LKTPCFTLHYAAP  178 (325)
T ss_dssp             EEEC----CEEEECCCTTCEECCC-------------------
T ss_pred             EEecCCCcccEEEeccccceecCCCCCc--ccccCCCcCccCH
Confidence                        3789988755443322  3345678899988

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.76  E-value=3.3e-19  Score=106.60  Aligned_cols=100  Identities=17%  Similarity=0.143  Sum_probs=78.8

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.+.+...++.+++..+++...+...   ..++..++..++.|++.|+.|+|++   +++|+|++|+|
T Consensus        98 l~hp~iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~N  171 (350)
T 1rdq_E           98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPEN  171 (350)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred             CCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccce
Confidence            57999999999999877666666666655554443321   2388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++.....     ..+..||+.|+||
T Consensus       172 Ill~~~g~~kL~DFg~a~~~~~~-----~~~~~gt~~y~aP  207 (350)
T 1rdq_E          172 LLIDQQGYIQVTDFGFAKRVKGR-----TWTLCGTPEALAP  207 (350)
T ss_dssp             EEECTTSCEEECCCTTCEECSSC-----BCCCEECGGGCCH
T ss_pred             EEECCCCCEEEcccccceeccCC-----cccccCCccccCH
Confidence                      4899998765433     2345789999987

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.76  E-value=9.5e-19  Score=104.05  Aligned_cols=102  Identities=23%  Similarity=0.253  Sum_probs=77.1

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhh-hcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVI-TCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~   79 (111)
                      ++||||+++++++.+.+...++++++..+ .+...+.   ....+++..+..++.|++.|+.|+|+.   +++|+|++|+
T Consensus        86 l~h~~Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~  159 (335)
T 3dls_A           86 VEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFID---RHPRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDE  159 (335)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEEECCTTSCBHHHHHH---TCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGG
T ss_pred             CCCCCEeeEEEEEeeCCEEEEEEEeCCCCccHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHH
Confidence            57999999999998876555555554433 3333322   223489999999999999999999999   9999999999


Q ss_pred             C----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           80 N----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |          ++|||.+........   .....||+.|+||
T Consensus       160 NIll~~~~~~kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aP  198 (335)
T 3dls_A          160 NIVIAEDFTIKLIDFGSAAYLERGKL---FYTFCGTIEYCAP  198 (335)
T ss_dssp             GEEECTTSCEEECCCTTCEECCTTCC---BCEECSCGGGCCH
T ss_pred             HEEEcCCCcEEEeecccceECCCCCc---eeccCCCccccCh
Confidence            9          489999876544322   2345689999987

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.76  E-value=1.9e-19  Score=107.95  Aligned_cols=102  Identities=21%  Similarity=0.239  Sum_probs=71.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.+.+...++.+++..+.+...+..   ...++..++..++.|++.|+.|+|++   +++|+|++|+|
T Consensus        73 l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~N  146 (361)
T 3uc3_A           73 LRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICN---AGRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLEN  146 (361)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGG
T ss_pred             CCCCCCCcEEEEEeeCCEEEEEEEeCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHH
Confidence            5899999999999987766666666655554433322   22388999999999999999999999   99999999999


Q ss_pred             ------------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ------------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ------------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                  ++|||+++.......   .....||+.|+||
T Consensus       147 ill~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aP  186 (361)
T 3uc3_A          147 TLLDGSPAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAP  186 (361)
T ss_dssp             EEECSSSSCCEEECCCCCC------------------CTTSCH
T ss_pred             EEEcCCCCceEEEeecCccccccccCC---CCCCcCCCCcCCh
Confidence                        378988764322221   2345789999987

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.75  E-value=1.6e-18  Score=105.72  Aligned_cols=101  Identities=24%  Similarity=0.296  Sum_probs=71.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.... ..++++++..+++...+.   ....+++.++..++.|++.|+.|||++   +++|+|++|+|
T Consensus       197 l~hpniv~l~~~~~~~~-~~lv~e~~~~g~L~~~l~---~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~N  269 (419)
T 3i6u_A          197 LNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVV---GNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPEN  269 (419)
T ss_dssp             CCCTTBCCCCEEEESSE-EEEEEECCTTCBGGGGTS---SSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGG
T ss_pred             CCCCCEeeEEEEEecCc-eEEEEEcCCCCcHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHh
Confidence            58999999999986533 445556665555544433   234489999999999999999999999   99999999999


Q ss_pred             -------------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 -------------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 -------------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                   ++|||.++.......   .....||+.|+||
T Consensus       270 Ill~~~~~~~~~kl~DFG~a~~~~~~~~---~~~~~gt~~y~aP  310 (419)
T 3i6u_A          270 VLLSSQEEDCLIKITDFGHSKILGETSL---MRTLCGTPTYLAP  310 (419)
T ss_dssp             EEESSSSSSCCEEECCSSTTTSCC--------------CTTCCT
T ss_pred             EEEecCCCcceEEEeecccceecCCCcc---ccccCCCCCccCc
Confidence                         378999876543321   3456789999998

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.75  E-value=8.9e-19  Score=105.70  Aligned_cols=107  Identities=27%  Similarity=0.380  Sum_probs=80.6

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCC-------------CCCCCCHHHHHHHHHHHHHHHHHhhhcCC
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQ-------------PSPVLDWMTRVRIVVDALRGLEYLHEKVQ   68 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~~~~~~~~~~i~~~l~~lh~~~~   68 (111)
                      +||||+++++++...+...++++++..+++...+....             ....+++.++..++.|++.|+.|||+.  
T Consensus       133 ~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--  210 (382)
T 3tt0_A          133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK--  210 (382)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             CCchhhhheeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC--
Confidence            79999999999998777667777776655544433211             123489999999999999999999999  


Q ss_pred             CCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           69 PSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        69 ~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                       +++|+|+||+|          ++|||+++...............+|..|+||
T Consensus       211 -~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aP  262 (382)
T 3tt0_A          211 -KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP  262 (382)
T ss_dssp             -TCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCH
T ss_pred             -CEecCCCCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCH
Confidence             99999999999          4899998866543322123334567889887

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.75  E-value=1.2e-18  Score=105.61  Aligned_cols=105  Identities=21%  Similarity=0.284  Sum_probs=80.0

Q ss_pred             CCCccceeeeeeeeeCCc--cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 047898            1 LKHENLVELLGYCVEGNL--RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRS   78 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~   78 (111)
                      ++||||+++++++...+.  ..++++++..+++...+........+++.++..++.|++.|+.|+|++   +++|+|++|
T Consensus        64 l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp  140 (396)
T 4eut_A           64 LNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKP  140 (396)
T ss_dssp             CCCTTBCCEEEEEECTTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCG
T ss_pred             cCCCCCCeEEEeeccCCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCH
Confidence            579999999999987552  345556666666655554433333489999999999999999999999   999999999


Q ss_pred             CCc--------------CCCcccccCCCCcccccccccCccccccCC
Q 047898           79 SNI--------------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        79 ~ni--------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +||              +|||.++.......   .....||..|+||
T Consensus       141 ~NIll~~~~~~~~~~kL~DFG~a~~~~~~~~---~~~~~gt~~y~aP  184 (396)
T 4eut_A          141 GNIMRVIGEDGQSVYKLTDFGAARELEDDEQ---FVSLYGTEEYLHP  184 (396)
T ss_dssp             GGEEEEECTTSCEEEEECCGGGCEECCCGGG---SSCSSSCCTTCCH
T ss_pred             HHEEEeecCCCceeEEEecCCCceEccCCCc---cccccCCccccCH
Confidence            993              78998876544332   2345689999987

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.75  E-value=2.7e-19  Score=104.63  Aligned_cols=104  Identities=25%  Similarity=0.386  Sum_probs=74.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+...++.+++..+++...+...   ..+++.++..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        68 l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~N  141 (294)
T 4eqm_A           68 LSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESH---GPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQN  141 (294)
T ss_dssp             CCBTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGG
T ss_pred             CCCCCCceEEEeeeeCCeEEEEEeCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHH
Confidence            57999999999999877666666666655554443322   2388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+......... ......||+.|+||
T Consensus       142 il~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aP  181 (294)
T 4eqm_A          142 ILIDSNKTLKIFDFGIAKALSETSLT-QTNHVLGTVQYFSP  181 (294)
T ss_dssp             EEECTTSCEEECCCSSSTTC--------------CCSSCCH
T ss_pred             EEECCCCCEEEEeCCCcccccccccc-ccCccccCccccCH
Confidence                      4899998765433211 12345688999987

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.75  E-value=2.5e-19  Score=107.42  Aligned_cols=107  Identities=15%  Similarity=0.068  Sum_probs=81.2

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCC--CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGA--QPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSS   79 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~   79 (111)
                      .|+||+.+++++...+...++++++..+++...+...  .....+++.++..++.|++.|+.|+|++   +++|||+||+
T Consensus       125 ~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~  201 (365)
T 3e7e_A          125 MQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPD  201 (365)
T ss_dssp             GGGGBCCEEEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGG
T ss_pred             hhhhhhhhheeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHH
Confidence            3899999999999877777777777766665554321  1233489999999999999999999999   9999999999


Q ss_pred             Cc---------------------CCCcccccCCCCcccccccccCccccccCC
Q 047898           80 NI---------------------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 ni---------------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      ||                     +|||+++.+.............||..|+||
T Consensus       202 NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aP  254 (365)
T 3e7e_A          202 NFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCV  254 (365)
T ss_dssp             GEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCH
T ss_pred             HEEecccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCCh
Confidence            93                     588888654322222223456799999997

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.75  E-value=5.6e-19  Score=103.80  Aligned_cols=108  Identities=17%  Similarity=0.261  Sum_probs=78.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCC---------------------CCCCCCHHHHHHHHHHHHHH
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQ---------------------PSPVLDWMTRVRIVVDALRG   59 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~l~~~~~~~~~~~i~~~   59 (111)
                      ++||||+++++++...+....+++++..+++...+....                     ....+++.++..++.|++.|
T Consensus        83 l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~  162 (314)
T 2ivs_A           83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQG  162 (314)
T ss_dssp             CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHH
T ss_pred             CCCCceeeEEEEEecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHH
Confidence            579999999999988776666666666554443332211                     11237888999999999999


Q ss_pred             HHHhhhcCCCCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           60 LEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        60 l~~lh~~~~~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +.|+|++   +++|+|++|+|          ++|||.++...............+++.|+||
T Consensus       163 l~~lH~~---~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  221 (314)
T 2ivs_A          163 MQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAI  221 (314)
T ss_dssp             HHHHHHT---TEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCH
T ss_pred             HHHHHHC---CCcccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccCh
Confidence            9999999   99999999999          4899998766544332222334567789887

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.75  E-value=4.1e-19  Score=110.17  Aligned_cols=102  Identities=25%  Similarity=0.347  Sum_probs=78.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||++++++|.......++.+++..+.+...+..   ...+++.++..++.|++.|+.|+|++   +++|+|++|+|
T Consensus        93 l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~N  166 (494)
T 3lij_A           93 LDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIH---RMKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPEN  166 (494)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred             CCCCCCCeEEEEEEeCCEEEEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhh
Confidence            5899999999999987766666666655544333222   22388899999999999999999999   99999999999


Q ss_pred             -------------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 -------------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 -------------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                   ++|||++........   .....||+.|+||
T Consensus       167 il~~~~~~~~~~kl~DfG~a~~~~~~~~---~~~~~gt~~y~aP  207 (494)
T 3lij_A          167 LLLESKEKDALIKIVDFGLSAVFENQKK---MKERLGTAYYIAP  207 (494)
T ss_dssp             EEESCSSTTCCEEECCCTTCEECBTTBC---BCCCCSCTTTCCH
T ss_pred             EEEeCCCCCCcEEEEECCCCeECCCCcc---ccccCCCcCeeCH
Confidence                         378998876543322   3446789999998

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.75  E-value=9.1e-19  Score=103.48  Aligned_cols=85  Identities=21%  Similarity=0.305  Sum_probs=56.7

Q ss_pred             hhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC----------cCCCcccccCCCC
Q 047898           24 WIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNM   93 (111)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n----------i~~~g~~~~~~~~   93 (111)
                      +++..+.+...+.........++..+..++.|++.|+.|+|++   +++|+|++|+|          ++|||.++.....
T Consensus       141 e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~  217 (332)
T 3qd2_B          141 QLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQD  217 (332)
T ss_dssp             ECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC
T ss_pred             EecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccc
Confidence            3333334333333333333356667889999999999999999   99999999999          4899998766543


Q ss_pred             ccc----------ccccccCccccccCC
Q 047898           94 AAR----------LHSTRVLGTFSYHAP  111 (111)
Q Consensus        94 ~~~----------~~~~~~~~~~~~~aP  111 (111)
                      ...          .......||+.|+||
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~gt~~y~aP  245 (332)
T 3qd2_B          218 EEEQTVLTPMPAYATHTGQVGTKLYMSP  245 (332)
T ss_dssp             --------------CCCSCC-CGGGSCH
T ss_pred             hhhccccccccccccccccCCCcCccCh
Confidence            211          012335689999987

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.75  E-value=8.7e-19  Score=104.71  Aligned_cols=65  Identities=22%  Similarity=0.360  Sum_probs=52.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           44 LDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        44 l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +++..+..++.|++.|+.|+|++   +++|+|++|+|          ++|||.+................+|..|+||
T Consensus       190 l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP  264 (359)
T 3vhe_A          190 LTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP  264 (359)
T ss_dssp             BCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCH
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeECh
Confidence            78889999999999999999999   99999999999          4899999866544332223445678889987

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.75  E-value=8.5e-19  Score=104.28  Aligned_cols=107  Identities=22%  Similarity=0.288  Sum_probs=79.1

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCC--------------------CCCCCHHHHHHHHHHHHHHHH
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQP--------------------SPVLDWMTRVRIVVDALRGLE   61 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~l~~~~~~~~~~~i~~~l~   61 (111)
                      +||||+++++++...+...++++++..+++...+.....                    ...+++..+..++.|++.|+.
T Consensus       107 ~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~  186 (344)
T 1rjb_A          107 SHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGME  186 (344)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHH
T ss_pred             CCCCeeeEEEEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHH
Confidence            799999999999987766667677766555444433221                    123788999999999999999


Q ss_pred             HhhhcCCCCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           62 YLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        62 ~lh~~~~~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |+|+.   +++|+|++|+|          ++|||.+................+|+.|+||
T Consensus       187 ~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aP  243 (344)
T 1rjb_A          187 FLEFK---SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAP  243 (344)
T ss_dssp             HHHHT---TEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCH
T ss_pred             HHHhC---CcccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCH
Confidence            99999   99999999999          4899998765443322222334567789887

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.75  E-value=4.8e-19  Score=107.52  Aligned_cols=104  Identities=16%  Similarity=0.186  Sum_probs=70.3

Q ss_pred             CCCccceeeeeeeee----CCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCC
Q 047898            1 LKHENLVELLGYCVE----GNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDI   76 (111)
Q Consensus         1 l~h~~iv~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l   76 (111)
                      .+||||+++++++..    .....++++++..+++...+... ....+++.++..++.|++.|+.|||+.   +++|+|+
T Consensus       112 ~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDl  187 (400)
T 1nxk_A          112 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDV  187 (400)
T ss_dssp             TTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             cCCCCcceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCc
Confidence            379999999999875    22233455555555554444332 223489999999999999999999999   9999999


Q ss_pred             CCCC-------------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           77 RSSN-------------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        77 ~~~n-------------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +++|             ++|||+++.......   ..+.+||+.|+||
T Consensus       188 kp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~---~~~~~gt~~y~aP  232 (400)
T 1nxk_A          188 KPENLLYTSKRPNAILKLTDFGFAKETTSHNS---LTTPCYTPYYVAP  232 (400)
T ss_dssp             CGGGEEESSSSTTCCEEECCCTTCEECC--------------CTTCCG
T ss_pred             CcceEEEecCCCCccEEEEecccccccCCCCc---cccCCCCCCccCH
Confidence            9999             378998876543322   2345789999997

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.75  E-value=4.2e-19  Score=105.46  Aligned_cols=108  Identities=23%  Similarity=0.329  Sum_probs=78.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCC---------------------CCCCCCHHHHHHHHHHHHHH
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQ---------------------PSPVLDWMTRVRIVVDALRG   59 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~l~~~~~~~~~~~i~~~   59 (111)
                      ++||||+++++++...+...++++++..+++...+....                     ....+++.++..++.|++.|
T Consensus       107 l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~  186 (343)
T 1luf_A          107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAG  186 (343)
T ss_dssp             CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEEEEEccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHH
Confidence            589999999999988776666667666555544332211                     11348899999999999999


Q ss_pred             HHHhhhcCCCCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           60 LEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        60 l~~lh~~~~~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +.|+|++   +++|+|++|+|          ++|||.++...............+++.|+||
T Consensus       187 l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aP  245 (343)
T 1luf_A          187 MAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPP  245 (343)
T ss_dssp             HHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCH
T ss_pred             HHHHHhC---CeecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecCh
Confidence            9999999   99999999999          4899988755433221112344678889887

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.75  E-value=9.4e-20  Score=109.49  Aligned_cols=108  Identities=20%  Similarity=0.297  Sum_probs=78.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCC----CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGA----QPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDI   76 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l   76 (111)
                      ++||||+++++++.......++++++..+++...+...    .....+++.++..++.|++.|+.|||++   +++|+|+
T Consensus       131 l~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDl  207 (367)
T 3l9p_A          131 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDI  207 (367)
T ss_dssp             CCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCCCCCeEEEEEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCC
Confidence            58999999999999877777777777665554443321    1223488999999999999999999999   9999999


Q ss_pred             CCCC-------------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           77 RSSN-------------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        77 ~~~n-------------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +|+|             ++|||+++...............+|+.|+||
T Consensus       208 kp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aP  255 (367)
T 3l9p_A          208 AARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP  255 (367)
T ss_dssp             CGGGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCH
T ss_pred             ChhhEEEecCCCCceEEECCCccccccccccccccCCCcCCcccEECH
Confidence            9999             3788887643222111112334568889987

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.75  E-value=2.1e-18  Score=101.94  Aligned_cols=110  Identities=32%  Similarity=0.537  Sum_probs=84.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCC-CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQ-PSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~   79 (111)
                      ++||||+++++++...+...++++++..+++...+.... ....+++..+..++.|++.|+.|+|+...++++|+|++|+
T Consensus        84 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~  163 (326)
T 3uim_A           84 AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAA  163 (326)
T ss_dssp             CCCTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGG
T ss_pred             ccCCCccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchh
Confidence            579999999999998777777777777666555444332 2334899999999999999999999976668999999999


Q ss_pred             C----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           80 N----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |          ++|||.+......... ......||+.|+||
T Consensus       164 Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aP  204 (326)
T 3uim_A          164 NILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAP  204 (326)
T ss_dssp             GEEECTTCCEEECCCSSCEECCSSSSC-EECCCCSCGGGCCH
T ss_pred             hEEECCCCCEEeccCccccccCccccc-ccccccCCcCccCH
Confidence            9          4899998765433222 12345689999987

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.75  E-value=8.4e-19  Score=105.93  Aligned_cols=107  Identities=13%  Similarity=0.193  Sum_probs=79.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+...++++++..+.+...+..... ..+++.++..++.|++.|+.|||++   +++|+|+||+|
T Consensus        83 l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~N  158 (389)
T 3gni_B           83 FNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFM-DGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASH  158 (389)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred             CCCCCCCcEeEEEEECCEEEEEEEccCCCCHHHHHhhhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHH
Confidence            5899999999999988877777777776666555443222 2388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccc-----cccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARL-----HSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~-----~~~~~~~~~~~~aP  111 (111)
                                ++|||.+..........     ......||..|+||
T Consensus       159 Ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  204 (389)
T 3gni_B          159 ILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSP  204 (389)
T ss_dssp             EEECTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCH
T ss_pred             EEEcCCCCEEEcccccceeeccccccccccccccccccccccccCH
Confidence                      37888765433221110     01234678889987

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.75  E-value=6.6e-19  Score=109.06  Aligned_cols=102  Identities=23%  Similarity=0.308  Sum_probs=77.1

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.......++.+++..+.+...+..   ...+++.++..++.|++.|+.|+|++   +++|+|++|+|
T Consensus        78 l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~N  151 (486)
T 3mwu_A           78 LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIK---RKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPEN  151 (486)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGG
T ss_pred             CCCCCcCeEEEEEEcCCEEEEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHH
Confidence            5899999999999987766566666655444333322   12388999999999999999999999   99999999999


Q ss_pred             -------------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 -------------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 -------------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                   ++|||+++.......   .....||+.|+||
T Consensus       152 il~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aP  192 (486)
T 3mwu_A          152 ILLESKEKDCDIKIIDFGLSTCFQQNTK---MKDRIGTAYYIAP  192 (486)
T ss_dssp             EEESSSSTTCCEEECSCSCTTTBCCC-------CCTTGGGGCCG
T ss_pred             EEEecCCCCCCEEEEECCcCeECCCCCc---cCCCcCCCCCCCH
Confidence                         378998876543322   2445789999998

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.75  E-value=7.3e-19  Score=105.88  Aligned_cols=106  Identities=14%  Similarity=0.218  Sum_probs=71.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+...++++++..+++...+...  ...+++.++..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus       103 l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~N  177 (373)
T 2qol_A          103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARN  177 (373)
T ss_dssp             CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGG
T ss_pred             CCCCCCCeEEEEEeeCCceEEEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcce
Confidence            58999999999999877667777777776666555432  22388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCccccc-ccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLH-STRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~-~~~~~~~~~~~aP  111 (111)
                                ++|||+++.......... .....++..|+||
T Consensus       178 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aP  219 (373)
T 2qol_A          178 ILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSP  219 (373)
T ss_dssp             EEECTTCCEEECCC----------------------CTTSCH
T ss_pred             EEEcCCCCEEECcCccccccccCCccceeccCCCcCCCccCh
Confidence                      489999876654322111 1122346678887

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.74  E-value=4.5e-18  Score=98.40  Aligned_cols=105  Identities=27%  Similarity=0.341  Sum_probs=79.5

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+...++.+++..+++...+..   ...++..++..++.|++.|+.++|+.   +++|+|++++|
T Consensus        62 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~N  135 (276)
T 2yex_A           62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPEN  135 (276)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBT---TTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred             cCCCCceeeeeEEEcCCEEEEEEEecCCCcHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHH
Confidence            5799999999999987766666676665555544432   23488999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+................++..|+||
T Consensus       136 il~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  176 (276)
T 2yex_A          136 LLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP  176 (276)
T ss_dssp             EEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCG
T ss_pred             EEEccCCCEEEeeCCCccccCCCcchhcccCCccccCccCh
Confidence                      4889987654332221113345678889887

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.74  E-value=9.5e-19  Score=108.78  Aligned_cols=102  Identities=26%  Similarity=0.326  Sum_probs=79.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.+.....++.+++..+.+...+..   ...+++..+..++.|++.|+.|||+.   +++|+|++|+|
T Consensus       103 l~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~N  176 (504)
T 3q5i_A          103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIIN---RHKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPEN  176 (504)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred             CCCCCCCeEEEEEEcCCEEEEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHH
Confidence            5799999999999987766666666665544333322   22389999999999999999999999   99999999999


Q ss_pred             -------------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 -------------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 -------------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                   ++|||++........   .....||+.|+||
T Consensus       177 il~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aP  217 (504)
T 3q5i_A          177 ILLENKNSLLNIKIVDFGLSSFFSKDYK---LRDRLGTAYYIAP  217 (504)
T ss_dssp             EEESSTTCCSSEEECCCTTCEECCTTSC---BCCCCSCTTTCCH
T ss_pred             EEEecCCCCccEEEEECCCCEEcCCCCc---cccccCCcCCCCH
Confidence                         378998876544322   3445789999997

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.74  E-value=1.2e-18  Score=102.65  Aligned_cols=101  Identities=21%  Similarity=0.210  Sum_probs=74.1

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +|+||++++++|.+++...++++++. +.+...+...  ...+++.++..++.|++.|+.|+|+.   +++|+|+||+| 
T Consensus       115 ~h~~iv~l~~~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NI  188 (311)
T 3p1a_A          115 QHPCCVRLEQAWEEGGILYLQTELCG-PSLQQHCEAW--GASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANI  188 (311)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCC-CBHHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGE
T ss_pred             CCCcEEEEEEEEEeCCEEEEEEeccC-CCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHE
Confidence            79999999999998776666666552 2222222111  22389999999999999999999999   99999999999 


Q ss_pred             ---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                               ++|||.+........   .....||+.|+||
T Consensus       189 ll~~~~~~kl~DFG~a~~~~~~~~---~~~~~gt~~y~aP  225 (311)
T 3p1a_A          189 FLGPRGRCKLGDFGLLVELGTAGA---GEVQEGDPRYMAP  225 (311)
T ss_dssp             EECGGGCEEECCCTTCEECC---------CCCCCGGGCCG
T ss_pred             EECCCCCEEEccceeeeecccCCC---CcccCCCccccCH
Confidence                     489999876543322   2345689999998

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.74  E-value=6.7e-19  Score=106.67  Aligned_cols=105  Identities=20%  Similarity=0.283  Sum_probs=72.8

Q ss_pred             CCCccceeeeeeeeeCCc------cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeec
Q 047898            1 LKHENLVELLGYCVEGNL------RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQR   74 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~   74 (111)
                      ++||||++++++|...+.      ..++.+++.................++...+..++.|++.|+.|+|+.   +++|+
T Consensus        89 l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHr  165 (394)
T 4e7w_A           89 VKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHR  165 (394)
T ss_dssp             CCCTTBCCEEEEEEEESSSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECS
T ss_pred             CCCCCcceEEEEEEecCCCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCC
Confidence            589999999999976442      123334433221111111111123488999999999999999999999   99999


Q ss_pred             CCCCCC-----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           75 DIRSSN-----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        75 ~l~~~n-----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |++|+|           ++|||.++.......   .....+|..|+||
T Consensus       166 Dlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~---~~~~~~t~~y~aP  210 (394)
T 4e7w_A          166 DIKPQNLLLDPPSGVLKLIDFGSAKILIAGEP---NVSYICSRYYRAP  210 (394)
T ss_dssp             CCSGGGEEEETTTTEEEECCCTTCEECCTTCC---CCSSCSCGGGCCH
T ss_pred             CCCHHHEEEcCCCCcEEEeeCCCcccccCCCC---CcccccCcCccCH
Confidence            999999           489999876543322   2345678899987

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.74  E-value=1.5e-18  Score=102.00  Aligned_cols=103  Identities=19%  Similarity=0.210  Sum_probs=73.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+...++++++..+.+......   ...++...+..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        59 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~N  132 (311)
T 4agu_A           59 LKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRY---QRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPEN  132 (311)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred             CCCCCccchhheeecCCeEEEEEEeCCCchHHHHHhh---hcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhh
Confidence            5799999999999987766666676665544433322   23388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+.........  .....+|..|+||
T Consensus       133 il~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aP  171 (311)
T 4agu_A          133 ILITKHSVIKLCDFGFARLLTGPSDY--YDDEVATRWYRSP  171 (311)
T ss_dssp             EEECTTSCEEECCCTTCEECC--------------GGGCCH
T ss_pred             EEEcCCCCEEEeeCCCchhccCcccc--cCCCcCCccccCh
Confidence                      4899998765433222  2344678888887

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.74  E-value=7.2e-19  Score=104.22  Aligned_cols=105  Identities=17%  Similarity=0.290  Sum_probs=69.8

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.... ...+++++..+.+...+...  ...++..++..++.|++.|+.|+|++   +++|+|++|+|
T Consensus        74 l~hp~iv~~~~~~~~~~-~~~v~~~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~N  147 (327)
T 3lzb_A           74 VDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARN  147 (327)
T ss_dssp             CCBTTBCCCCEEEESSS-EEEEECCCSSCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGG
T ss_pred             CCCCCeeEEEEEEecCC-ceEEEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHH
Confidence            57999999999998755 34455555555444443322  22388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.++...............+|+.|+||
T Consensus       148 Il~~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aP  188 (327)
T 3lzb_A          148 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL  188 (327)
T ss_dssp             EEEEETTEEEECCTTC----------------CCCGGGSCH
T ss_pred             EEEcCCCCEEEccCcceeEccCccccccccCCCccccccCH
Confidence                      4899998766443322222334567789887

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.74  E-value=7.5e-19  Score=102.41  Aligned_cols=103  Identities=26%  Similarity=0.357  Sum_probs=72.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+...++++++.. .+...+...  ...++..++..++.|++.|+.|+|++   +++|+|++|+|
T Consensus        57 l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~N  130 (288)
T 1ob3_A           57 LKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQN  130 (288)
T ss_dssp             CCCTTBCCEEEEEECSSCEEEEEECCSE-EHHHHHHTS--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGG
T ss_pred             cCCCCEeeeeeEEccCCeEEEEEEecCC-CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHH
Confidence            5799999999999987655555555543 222222221  23388899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+.........  .....+|+.|+||
T Consensus       131 il~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~t~~y~aP  169 (288)
T 1ob3_A          131 LLINREGELKIADFGLARAFGIPVRK--YTHEIVTLWYRAP  169 (288)
T ss_dssp             EEECTTSCEEECCTTHHHHHCC-----------CCCTTCCH
T ss_pred             EEEcCCCCEEEeECccccccCccccc--cccccccccccCc
Confidence                      4899988754332211  2334678889887

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.74  E-value=1.6e-18  Score=103.54  Aligned_cols=102  Identities=25%  Similarity=0.318  Sum_probs=70.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+...++++++..+.+...+..   ...+++.++..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus       105 l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~N  178 (349)
T 2w4o_A          105 LSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVE---KGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPEN  178 (349)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTT---CSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGG
T ss_pred             CCCCCCcceeeeEecCCeEEEEEEeCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCccc
Confidence            5799999999999987766666676665555444432   23388999999999999999999999   99999999999


Q ss_pred             -------------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 -------------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 -------------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                   ++|||+++.......   .....||+.|+||
T Consensus       179 Ill~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aP  219 (349)
T 2w4o_A          179 LLYATPAPDAPLKIADFGLSKIVEHQVL---MKTVCGTPGYCAP  219 (349)
T ss_dssp             EEESSSSTTCCEEECCCC-------------------CGGGSCH
T ss_pred             EEEecCCCCCCEEEccCccccccCcccc---cccccCCCCccCH
Confidence                         378888775533221   2345688999987

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.74  E-value=1.9e-18  Score=103.05  Aligned_cols=103  Identities=27%  Similarity=0.329  Sum_probs=77.1

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+...++++++.. .+...+..  ....+++.++..++.|++.|+.|+|+.   +++|+|++++|
T Consensus        69 l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~N  142 (346)
T 1ua2_A           69 LSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNN  142 (346)
T ss_dssp             CCCTTBCCEEEEECCTTCCEEEEECCSE-EHHHHHTT--CCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGG
T ss_pred             CCCCCCCeEEEEEeeCCceEEEEEcCCC-CHHHHHHh--cCcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHH
Confidence            5799999999999887666666666553 22222222  223378888999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.++........  .....+|+.|+||
T Consensus       143 il~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~t~~y~aP  181 (346)
T 1ua2_A          143 LLLDENGVLKLADFGLAKSFGSPNRA--YTHQVVTRWYRAP  181 (346)
T ss_dssp             EEECTTCCEEECCCGGGSTTTSCCCC--CCCSCCCCTTCCH
T ss_pred             EEEcCCCCEEEEecccceeccCCccc--CCcccccccccCc
Confidence                      4899998866443322  3345688899987

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.74  E-value=1.3e-18  Score=103.92  Aligned_cols=99  Identities=22%  Similarity=0.334  Sum_probs=76.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+...++++++. +.+...+..  ....+++.++..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus       111 l~hpniv~~~~~~~~~~~~~lv~e~~~-g~l~~~l~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~N  184 (348)
T 1u5q_A          111 LRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEV--HKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGN  184 (348)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGG
T ss_pred             CCCCCEeeEEEEEEECCeEEEEEecCC-CCHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHH
Confidence            589999999999998776666666665 222222211  122388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+......      ....||+.|+||
T Consensus       185 Ill~~~~~~kL~DfG~a~~~~~~------~~~~gt~~y~aP  219 (348)
T 1u5q_A          185 ILLSEPGLVKLGDFGSASIMAPA------NSFVGTPYWMAP  219 (348)
T ss_dssp             EEEETTTEEEECCCTTCBSSSSB------CCCCSCGGGCCH
T ss_pred             EEECCCCCEEEeeccCceecCCC------CcccCCcceeCH
Confidence                      4899998765332      234688999987

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.74  E-value=7.1e-19  Score=108.82  Aligned_cols=102  Identities=24%  Similarity=0.349  Sum_probs=78.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+...++.+++..+.+...+..   ...+++.++..++.|++.|+.|+|++   +++|+|++|+|
T Consensus        83 l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~N  156 (484)
T 3nyv_A           83 LDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS---RKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPEN  156 (484)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHT---CSCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGG
T ss_pred             CCCCCCCcEEEEEEeCCEEEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHH
Confidence            5899999999999987666566666655544433322   23388999999999999999999999   99999999999


Q ss_pred             -------------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 -------------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 -------------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                   ++|||++........   .....||+.|+||
T Consensus       157 il~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aP  197 (484)
T 3nyv_A          157 LLLESKSKDANIRIIDFGLSTHFEASKK---MKDKIGTAYYIAP  197 (484)
T ss_dssp             EEESSSSTTCCEEECCTTHHHHBCCCCS---HHHHTTGGGTCCH
T ss_pred             EEEecCCCCCcEEEEeeeeeEEcccccc---cccCCCCccccCc
Confidence                         378998876543322   2345689999998

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.73  E-value=5.4e-18  Score=108.58  Aligned_cols=97  Identities=16%  Similarity=0.324  Sum_probs=73.7

Q ss_pred             CCCccceeeeeeeeeCCc-----cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecC
Q 047898            1 LKHENLVELLGYCVEGNL-----RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRD   75 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~   75 (111)
                      ++||||+++++++...+.     ..++++++..+++.....   .  .+++.++..++.|++.|+.|+|++   +++|+|
T Consensus       136 l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~---~--~l~~~~~~~~~~qi~~aL~~lH~~---giiHrD  207 (681)
T 2pzi_A          136 VVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKG---Q--KLPVAEAIAYLLEILPALSYLHSI---GLVYND  207 (681)
T ss_dssp             CCCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC-------C--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCC
T ss_pred             cCCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHh---C--CCCHHHHHHHHHHHHHHHHHHHHC---CCeecc
Confidence            579999999999987554     234445555444433221   1  489999999999999999999999   999999


Q ss_pred             CCCCC---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           76 IRSSN---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        76 l~~~n---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +||+|         ++|||.++.....      ....||+.|+||
T Consensus       208 lkp~NIll~~~~~kl~DFG~a~~~~~~------~~~~gt~~y~aP  246 (681)
T 2pzi_A          208 LKPENIMLTEEQLKLIDLGAVSRINSF------GYLYGTPGFQAP  246 (681)
T ss_dssp             CSGGGEEECSSCEEECCCTTCEETTCC------SCCCCCTTTSCT
T ss_pred             cChHHeEEeCCcEEEEecccchhcccC------CccCCCccccCH
Confidence            99999         4899998765433      234689999998

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.73  E-value=4.7e-18  Score=100.33  Aligned_cols=105  Identities=26%  Similarity=0.309  Sum_probs=76.3

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcC---CCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQ---GAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIR   77 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~   77 (111)
                      ++||||+++++++...+...++++++. +.+...+.   .......++...+..++.|++.|+.|+|++   +++|+|++
T Consensus        60 l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlk  135 (317)
T 2pmi_A           60 LKHENIVRLYDVIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLK  135 (317)
T ss_dssp             CCBTTBCCEEEEECCTTEEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCC
T ss_pred             cCCCCcceEEEEEEECCeEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCC
Confidence            589999999999998776666666654 22222111   111223388899999999999999999999   99999999


Q ss_pred             CCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           78 SSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        78 ~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |+|          ++|||.+.........  .....+|+.|+||
T Consensus       136 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~t~~y~aP  177 (317)
T 2pmi_A          136 PQNLLINKRGQLKLGDFGLARAFGIPVNT--FSSEVVTLWYRAP  177 (317)
T ss_dssp             GGGEEECTTCCEEECCCSSCEETTSCCCC--CCCCCSCCTTCCH
T ss_pred             hHHeEEcCCCCEEECcCccceecCCCccc--CCCCcccccccCc
Confidence            999          4899998765433221  2345678899987

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.73  E-value=2e-18  Score=102.52  Aligned_cols=103  Identities=22%  Similarity=0.333  Sum_probs=78.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++.+.+...++++++..+.+......   ...+++.++..++.|++.|+.|+|++   +++|+|++++|
T Consensus        98 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~N  171 (335)
T 2owb_A           98 LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKR---RKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGN  171 (335)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGG
T ss_pred             CCCCCCCeEEEEEecCCeEEEEEecCCCCCHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchh
Confidence            5799999999999987766666666665444433322   12388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                +.|||.+.........  .....++..|+||
T Consensus       172 Il~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aP  210 (335)
T 2owb_A          172 LFLNEDLEVKIGDFGLATKVEYDGER--KKVLCGTPNYIAP  210 (335)
T ss_dssp             EEECTTCCEEECCCTTCEECCSTTCC--BCCCCSCCSSCCH
T ss_pred             EEEcCCCCEEEeeccCceecccCccc--ccccCCCccccCH
Confidence                      4899998765433222  2345688889887

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.73  E-value=1.5e-18  Score=105.05  Aligned_cols=102  Identities=17%  Similarity=0.311  Sum_probs=71.7

Q ss_pred             CccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC--
Q 047898            3 HENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN--   80 (111)
Q Consensus         3 h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n--   80 (111)
                      ||||+++++++...+...++++ +..+++...+..   ...+++.++..++.|++.|+.|+|+.   +++|+||+|+|  
T Consensus       115 ~~~iv~~~~~~~~~~~~~lv~E-~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIl  187 (390)
T 2zmd_A          115 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFL  187 (390)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEE-CCSEEHHHHHHH---CSSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEE
T ss_pred             CCeEEEEEEEEecCCEEEEEEe-cCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEE
Confidence            6999999999988665444444 222333333322   22478888999999999999999999   99999999999  


Q ss_pred             -------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 -------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 -------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                             ++|||+++...............||+.|+||
T Consensus       188 l~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aP  225 (390)
T 2zmd_A          188 IVDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPP  225 (390)
T ss_dssp             ESSSCEEECCCSSSCCC---------CCSCCCGGGCCH
T ss_pred             EECCeEEEEecCccccccCCCccccCCCCCcCCCccCh
Confidence                   4899999876544322223456799999998

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.73  E-value=1.1e-18  Score=107.43  Aligned_cols=85  Identities=25%  Similarity=0.464  Sum_probs=62.0

Q ss_pred             CCCccceeeeeeeeeCCc--cchhhhhhh--hhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCC
Q 047898            1 LKHENLVELLGYCVEGNL--RDELIWIIH--VITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDI   76 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l   76 (111)
                      ++||||+++++++.....  ...++.+++  .+.+...+.   ....+++..+..++.|++.|+.|||+.   +++||||
T Consensus       109 l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~---~~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDl  182 (458)
T 3rp9_A          109 LNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFR---TPVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDL  182 (458)
T ss_dssp             CCCTTBCCEEEECCCSCTTTCCCEEEEECCCSEEHHHHHH---SSCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCC
T ss_pred             CCCCCCCceEEEEecCCcccCceEEEEEeccccchhhhcc---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCC
Confidence            589999999999965432  112222222  222222222   223489999999999999999999999   9999999


Q ss_pred             CCCC----------cCCCcccccCC
Q 047898           77 RSSN----------IADFNLSNQAP   91 (111)
Q Consensus        77 ~~~n----------i~~~g~~~~~~   91 (111)
                      ||+|          |+|||+++...
T Consensus       183 Kp~NILl~~~~~~kl~DFGla~~~~  207 (458)
T 3rp9_A          183 KPANCLVNQDCSVKVCDFGLARTVD  207 (458)
T ss_dssp             CGGGEEECTTCCEEECCCTTCBCTT
T ss_pred             ChhhEEECCCCCEeecccccchhcc
Confidence            9999          48999998654

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.73  E-value=1.3e-18  Score=104.39  Aligned_cols=105  Identities=19%  Similarity=0.203  Sum_probs=74.9

Q ss_pred             CCCccceeeeeeeeeCCc----cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCC
Q 047898            1 LKHENLVELLGYCVEGNL----RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDI   76 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l   76 (111)
                      ++||||+++++++.....    ..++++++ .+++...+..  ....+++.++..++.|++.|+.|||+.   +++|+||
T Consensus       105 l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDl  178 (364)
T 3op5_A          105 LKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA--NAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDI  178 (364)
T ss_dssp             CSCCCSCCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHH--TTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             ccCCCCCeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecC
Confidence            479999999999986422    23344444 4444333322  123489999999999999999999999   9999999


Q ss_pred             CCCC------------cCCCcccccCCCCcccc-----cccccCccccccCC
Q 047898           77 RSSN------------IADFNLSNQAPNMAARL-----HSTRVLGTFSYHAP  111 (111)
Q Consensus        77 ~~~n------------i~~~g~~~~~~~~~~~~-----~~~~~~~~~~~~aP  111 (111)
                      +|+|            ++|||+++.........     ......||+.|+||
T Consensus       179 kp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  230 (364)
T 3op5_A          179 KASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSI  230 (364)
T ss_dssp             CGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCH
T ss_pred             CHHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCH
Confidence            9999            37999987654432211     01234589999997

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.73  E-value=4e-18  Score=100.11  Aligned_cols=102  Identities=30%  Similarity=0.468  Sum_probs=73.2

Q ss_pred             CCccceeeeeeeeeCCcc-----chhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCC
Q 047898            2 KHENLVELLGYCVEGNLR-----DELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDI   76 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l   76 (111)
                      +||||+++++++......     ..+++++. +.+...+... ....+++.++..++.|++.|+.|+|++   +++|+|+
T Consensus        72 ~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dl  146 (308)
T 3g33_A           72 EHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKA-PPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDL  146 (308)
T ss_dssp             CCTTBCCEEEEEEECCSSSEEEEEEEEECCC-CBHHHHHHTC-CTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCCeEEeeeeeeccCCCCceeEEEEehhhh-cCHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCC
Confidence            599999999999875431     22333332 2333333222 223389999999999999999999999   9999999


Q ss_pred             CCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           77 RSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        77 ~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +|+|          ++|||.++.......   .....+|+.|+||
T Consensus       147 kp~Nil~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aP  188 (308)
T 3g33_A          147 KPENILVTSGGTVKLADFGLARIYSYQMA---LTPVVVTLWYRAP  188 (308)
T ss_dssp             CTTTEEECTTSCEEECSCSCTTTSTTCCC---SGGGGCCCSSCCH
T ss_pred             CHHHEEEcCCCCEEEeeCccccccCCCcc---cCCccccccccCc
Confidence            9999          489999876543322   2345788999987

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.73  E-value=2.9e-18  Score=99.99  Aligned_cols=106  Identities=27%  Similarity=0.369  Sum_probs=78.3

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+...++.+++..+.+...+........++...+..++.|++.|+.|+|+.   +++|+|++++|
T Consensus        76 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~N  152 (295)
T 2clq_A           76 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDN  152 (295)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred             CCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhh
Confidence            579999999999998776666667666555544443333333467888889999999999999999   99999999999


Q ss_pred             -----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 -----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 -----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                 ++|||.+.........  .....++..|+||
T Consensus       153 il~~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aP  192 (295)
T 2clq_A          153 VLINTYSGVLKISDFGTSKRLAGINPC--TETFTGTLQYMAP  192 (295)
T ss_dssp             EEEETTTCCEEECCTTTCEESCC-------CCCCCCGGGCCH
T ss_pred             EEEECCCCCEEEeecccccccCCCCCc--ccccCCCccccCh
Confidence                       3789888765433221  2345678889887

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.73  E-value=2.4e-18  Score=101.06  Aligned_cols=107  Identities=22%  Similarity=0.293  Sum_probs=79.7

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCC---------------CCCCCCHHHHHHHHHHHHHHHHHhhhc
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQ---------------PSPVLDWMTRVRIVVDALRGLEYLHEK   66 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~l~~~~~~~~~~~i~~~l~~lh~~   66 (111)
                      +||||+++++++...+...++.+++..+++...+....               ....+++.++..++.|++.|+.|+|+.
T Consensus        85 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~  164 (313)
T 1t46_A           85 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK  164 (313)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCCCeeeEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC
Confidence            79999999999998776666667766555544433221               122388999999999999999999999


Q ss_pred             CCCCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           67 VQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        67 ~~~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                         +++|+|++|+|          ++|||.+................+++.|+||
T Consensus       165 ---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  216 (313)
T 1t46_A          165 ---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAP  216 (313)
T ss_dssp             ---TCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCH
T ss_pred             ---CeecCCCccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeCh
Confidence               99999999999          4899998876554332223334567789887

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.73  E-value=2.2e-18  Score=102.00  Aligned_cols=103  Identities=22%  Similarity=0.340  Sum_probs=71.5

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+...++++++.. .+...+..  ....++..++..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        57 l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~N  130 (324)
T 3mtl_A           57 LKHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDD--CGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQN  130 (324)
T ss_dssp             CCCTTBCCEEEEEECSSCEEEEEECCSE-EHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGG
T ss_pred             cCCCCCCeeeeEEeeCCEEEEEeccccc-CHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHH
Confidence            5799999999999987766666666552 22222221  122388899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+.........  .....+|..|+||
T Consensus       131 Il~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~t~~y~aP  169 (324)
T 3mtl_A          131 LLINERGELKLADFGLARAKSIPTKT--YDNEVVTLWYRPP  169 (324)
T ss_dssp             EEECTTCCEEECSSSEEECC--------------CGGGCCH
T ss_pred             EEECCCCCEEEccCcccccccCCccc--cccccCcccccCh
Confidence                      4899998755433222  2344678889887

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.73  E-value=2.5e-18  Score=99.32  Aligned_cols=105  Identities=22%  Similarity=0.326  Sum_probs=79.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.+.+...++++++..+++...+...  ...++...+..++.|++.|+.++|+.   +++|+|++|+|
T Consensus        62 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~N  136 (269)
T 4hcu_A           62 LSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARN  136 (269)
T ss_dssp             CCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGG
T ss_pred             CCCCCEeeEEEEEecCCceEEEEEeCCCCcHHHHHHhc--CcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchhe
Confidence            57999999999999877666666776666555544332  22388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+......... ......++..|+||
T Consensus       137 il~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aP  176 (269)
T 4hcu_A          137 CLVGENQVIKVSDFGMTRFVLDDQYT-SSTGTKFPVKWASP  176 (269)
T ss_dssp             EEECGGGCEEECCTTGGGGBCCHHHH-STTSTTCCGGGCCH
T ss_pred             EEEcCCCCEEeccccccccccccccc-cccCcccccccCCH
Confidence                      4899998765433211 12234556778887

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.73  E-value=2.9e-18  Score=99.38  Aligned_cols=104  Identities=26%  Similarity=0.377  Sum_probs=68.8

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+...++.+++..+.+...+...  ...++..++..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        68 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~N  142 (278)
T 3cok_A           68 LKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNR--VKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSN  142 (278)
T ss_dssp             BCCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHTC--SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGG
T ss_pred             CCCCCeEeEEEEEccCCeEEEEEecCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHH
Confidence            47999999999999877666666766655554444322  23388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                +.|||.+.........  .....+++.|+||
T Consensus       143 ili~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aP  181 (278)
T 3cok_A          143 LLLTRNMNIKIADFGLATQLKMPHEK--HYTLCGTPNYISP  181 (278)
T ss_dssp             EEECTTCCEEECCCTTCEECC--------------------
T ss_pred             EEEcCCCCEEEEeecceeeccCCCCc--ceeccCCCCcCCc
Confidence                      4899988765433221  2334678889887

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.73  E-value=1.1e-18  Score=106.47  Aligned_cols=104  Identities=20%  Similarity=0.264  Sum_probs=71.3

Q ss_pred             CCCccceeeeeeeeeCCc------cchhhhhhhhhhcccCcC-CCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeee
Q 047898            1 LKHENLVELLGYCVEGNL------RDELIWIIHVITCKKGVQ-GAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQ   73 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h   73 (111)
                      ++||||++++++|.....      ..++++++... +...+. .......+++..+..++.|++.|+.|||+.   +++|
T Consensus       104 l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH  179 (420)
T 1j1b_A          104 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET-VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICH  179 (420)
T ss_dssp             CCCTTBCCEEEEEEEEETTTTEEEEEEEEECCCEE-HHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEEC
T ss_pred             cCCCCccceeeEEeccCCCCcceeEEeehhccccc-HHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---Cccc
Confidence            589999999999865321      11233333321 111111 011223488999999999999999999999   9999


Q ss_pred             cCCCCCC-----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           74 RDIRSSN-----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        74 ~~l~~~n-----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      ||||++|           |+|||+++.......   .....+|..|+||
T Consensus       180 rDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~~---~~~~~~t~~y~aP  225 (420)
T 1j1b_A          180 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRYYRAP  225 (420)
T ss_dssp             SCCSGGGEEEETTTTEEEECCCTTCEECCTTCC---CCSCCSCTTSCCH
T ss_pred             cCCChhhEEEeCCCCeEEeccchhhhhcccCCC---ceeeeeCCCcCCH
Confidence            9999999           489999876543322   2345788999987

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.73  E-value=2.5e-18  Score=105.25  Aligned_cols=104  Identities=25%  Similarity=0.326  Sum_probs=71.6

Q ss_pred             CCCccceeeeeeeeeCCc-----cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecC
Q 047898            1 LKHENLVELLGYCVEGNL-----RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRD   75 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~   75 (111)
                      ++||||+++++++.....     ..++.+++. +++...+.   ....++...+..++.|++.|+.|+|+.   +++|+|
T Consensus        82 l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~---~~~~l~~~~~~~i~~qil~aL~~LH~~---givHrD  154 (432)
T 3n9x_A           82 LKSDYIIRLYDLIIPDDLLKFDELYIVLEIAD-SDLKKLFK---TPIFLTEEHIKTILYNLLLGENFIHES---GIIHRD  154 (432)
T ss_dssp             CCCTTBCCEEEECCCSCTTTCCCEEEEEECCS-EEHHHHHH---SSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCC
T ss_pred             cCCCCcceEEEEEecCCCCcCCeEEEEEecCC-cCHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCC
Confidence            579999999999986532     223334332 23332222   223489999999999999999999999   999999


Q ss_pred             CCCCC----------cCCCcccccCCCCccc--------------------ccccccCccccccCC
Q 047898           76 IRSSN----------IADFNLSNQAPNMAAR--------------------LHSTRVLGTFSYHAP  111 (111)
Q Consensus        76 l~~~n----------i~~~g~~~~~~~~~~~--------------------~~~~~~~~~~~~~aP  111 (111)
                      +||+|          ++|||+++........                    ......+||.+|+||
T Consensus       155 lkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP  220 (432)
T 3n9x_A          155 LKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAP  220 (432)
T ss_dssp             CCGGGEEECTTCCEEECCCTTCEEC-------------------------------CCCCCTTCCH
T ss_pred             CCHHHeEECCCCCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCH
Confidence            99999          4899998866433211                    012456789999998

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.73  E-value=3.7e-18  Score=108.31  Aligned_cols=105  Identities=20%  Similarity=0.269  Sum_probs=74.5

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||+++++|... ...++++++..+.+...+...  ...+++.++..++.|++.|+.|||++   +++|+|++++|
T Consensus       393 l~hpniv~l~~~~~~~-~~~lv~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~N  466 (613)
T 2ozo_A          393 LDNPYIVRLIGVCQAE-ALMLVMEMAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARN  466 (613)
T ss_dssp             CCCTTBCCEEEEEESS-SEEEEEECCTTCBHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGG
T ss_pred             CCCCCEeeEEEEeccC-CeEEEEEeCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHH
Confidence            5899999999999763 355566776666665554332  23489999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccc-cccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARL-HSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~-~~~~~~~~~~~~aP  111 (111)
                                |+|||+++......... ......+++.|+||
T Consensus       467 ILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~AP  508 (613)
T 2ozo_A          467 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAP  508 (613)
T ss_dssp             EEEEETTEEEECCCSTTTTCC--------------CCTTSCH
T ss_pred             EEEcCCCcEEEeeccCcccccCCCceeeeccCCCCccceeCH
Confidence                      48999998764432211 11223456789987

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.73  E-value=3e-18  Score=101.62  Aligned_cols=103  Identities=24%  Similarity=0.356  Sum_probs=73.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+...++.+++..+.+......   ...+++..+..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        81 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~N  154 (331)
T 4aaa_A           81 LRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELF---PNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPEN  154 (331)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHS---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGG
T ss_pred             CCCCCEeeEEEEeecCCEEEEEEecCCcchHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChhe
Confidence            5799999999999987766666666665444433222   22388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+.........  .....++..|+||
T Consensus       155 il~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~t~~y~aP  193 (331)
T 4aaa_A          155 ILVSQSGVVKLCDFGFARTLAAPGEV--YDDEVATRWYRAP  193 (331)
T ss_dssp             EEECTTSCEEECCCTTC--------------CCCCCTTCCH
T ss_pred             EEEcCCCcEEEEeCCCceeecCCccc--cCCCcCCccccCc
Confidence                      4899988765433221  2345678889887

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.72  E-value=9.6e-19  Score=103.66  Aligned_cols=107  Identities=21%  Similarity=0.280  Sum_probs=77.3

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGA-----------QPSPVLDWMTRVRIVVDALRGLEYLHEKVQPS   70 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~   70 (111)
                      +||||+++++++...+...++++++..+++...+...           .....++...+..++.|++.|+.|+|+.   +
T Consensus       108 ~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~  184 (333)
T 2i1m_A          108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---N  184 (333)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred             CCCCeeeEEEEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---C
Confidence            7999999999999877666666666554443332211           0123378899999999999999999999   9


Q ss_pred             eeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           71 IIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        71 i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      ++|+|++|+|          ++|||.+................+|..|+||
T Consensus       185 ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  235 (333)
T 2i1m_A          185 CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAP  235 (333)
T ss_dssp             EECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCH
T ss_pred             cccCCcccceEEECCCCeEEECccccccccccccceeecCCCCCCccccCH
Confidence            9999999999          4899998765433322112334567789887

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.72  E-value=6e-18  Score=100.40  Aligned_cols=107  Identities=25%  Similarity=0.392  Sum_probs=79.0

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCC-------------CCCCCHHHHHHHHHHHHHHHHHhhhcCC
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQP-------------SPVLDWMTRVRIVVDALRGLEYLHEKVQ   68 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~l~~~~~~~~~~~i~~~l~~lh~~~~   68 (111)
                      +||||+++++++...+...++++++..+++...+.....             ...+++.++..++.|++.|+.|+|+.  
T Consensus        99 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--  176 (334)
T 2pvf_A           99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ--  176 (334)
T ss_dssp             CCTTBCCEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             cCCCEeeEEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC--
Confidence            799999999999987766667677666555444432221             22378899999999999999999999  


Q ss_pred             CCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           69 PSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        69 ~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                       +++|+|++++|          ++|||.++...............+++.|+||
T Consensus       177 -~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  228 (334)
T 2pvf_A          177 -KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP  228 (334)
T ss_dssp             -TEECSCCSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCH
T ss_pred             -CeeCCCCccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeCh
Confidence             99999999999          4899998766543322112334567789887

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.72  E-value=8e-19  Score=103.28  Aligned_cols=105  Identities=20%  Similarity=0.372  Sum_probs=69.6

Q ss_pred             CCCccceeeeeeeeeCCcc----chhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCC
Q 047898            1 LKHENLVELLGYCVEGNLR----DELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDI   76 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l   76 (111)
                      ++||||+++++++......    .++++++..+++...+..   ...+++.++..++.|++.|+.|+|++   +++|+|+
T Consensus        69 l~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dl  142 (311)
T 3ork_A           69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT---EGPMTPKRAIEVIADACQALNFSHQN---GIIHRDV  142 (311)
T ss_dssp             CCCTTBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCC
T ss_pred             CCCCCcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCC
Confidence            5799999999998865433    445555554444444332   22388999999999999999999999   9999999


Q ss_pred             CCCC----------cCCCcccccCCCCcccc-cccccCccccccCC
Q 047898           77 RSSN----------IADFNLSNQAPNMAARL-HSTRVLGTFSYHAP  111 (111)
Q Consensus        77 ~~~n----------i~~~g~~~~~~~~~~~~-~~~~~~~~~~~~aP  111 (111)
                      +++|          ++|||.+.......... ......||+.|+||
T Consensus       143 kp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  188 (311)
T 3ork_A          143 KPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP  188 (311)
T ss_dssp             CGGGEEEETTSCEEECCCSCC------------------CCTTCCH
T ss_pred             CHHHEEEcCCCCEEEeeccCcccccccccccccccccCcCcccCCH
Confidence            9999          48999987654432211 12345689999987

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.72  E-value=1.6e-18  Score=102.54  Aligned_cols=107  Identities=31%  Similarity=0.444  Sum_probs=78.0

Q ss_pred             CCCccceeeeeeeeeCCcc----chhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcC-------CC
Q 047898            1 LKHENLVELLGYCVEGNLR----DELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKV-------QP   69 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~-------~~   69 (111)
                      ++||||+++++++......    .++.+++..+++...+..    ..+++.++..++.|++.|+.|+|+..       ..
T Consensus        75 l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~  150 (322)
T 3soc_A           75 MKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA----NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKP  150 (322)
T ss_dssp             CCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEEC
T ss_pred             CCCCCchhhcceeccCCCCCceEEEEEecCCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCC
Confidence            5799999999999875532    345566555555444422    22889999999999999999999751       22


Q ss_pred             CeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           70 SIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        70 ~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +++|+|++|+|          ++|||.++...............||+.|+||
T Consensus       151 ~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aP  202 (322)
T 3soc_A          151 AISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAP  202 (322)
T ss_dssp             EEECSCCSGGGEEECTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCH
T ss_pred             CEEeCCCChHhEEECCCCeEEEccCCcccccccccCccccccCccCccccCH
Confidence            79999999999          4899998765543322223345789999997

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.72  E-value=3.1e-18  Score=105.65  Aligned_cols=99  Identities=27%  Similarity=0.342  Sum_probs=67.3

Q ss_pred             CCCccceeeeeeeeeCCcc------chhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeec
Q 047898            1 LKHENLVELLGYCVEGNLR------DELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQR   74 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~   74 (111)
                      ++||||+++++++......      .++++++..+ +....   .  ..++..++..++.|++.|+.|+|+.   +++||
T Consensus       118 l~hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~~-l~~~~---~--~~l~~~~~~~~~~qil~aL~~lH~~---~iiHr  188 (464)
T 3ttj_A          118 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVI---Q--MELDHERMSYLLYQMLCGIKHLHSA---GIIHR  188 (464)
T ss_dssp             CCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEE-HHHHH---T--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCC
T ss_pred             CCCCCCCcEEEEEccCCccccCCeEEEEEeCCCCC-HHHHH---h--hcCCHHHHHHHHHHHHHHHHHHHHC---CcccC
Confidence            5899999999999765421      2333444322 11111   1  1288899999999999999999999   99999


Q ss_pred             CCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           75 DIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        75 ~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |+||+|          ++|||+++.......   .....||++|+||
T Consensus       189 Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~---~~~~~gt~~y~aP  232 (464)
T 3ttj_A          189 DLKPSNIVVKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYYRAP  232 (464)
T ss_dssp             CCCGGGEEECTTSCEEECCCCCC-----CCC---C----CCCTTCCH
T ss_pred             CCChHhEEEeCCCCEEEEEEEeeeecCCCcc---cCCCcccccccCH
Confidence            999999          489999876543321   3446789999997

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.72  E-value=4.1e-18  Score=99.47  Aligned_cols=103  Identities=22%  Similarity=0.333  Sum_probs=77.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+...++.+++..+.+......   ...+++.++..++.|++.|+.|+|+.   +++|+|++++|
T Consensus        72 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~N  145 (294)
T 2rku_A           72 LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKR---RKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGN  145 (294)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGG
T ss_pred             CCCCCEeeeeeeeccCCEEEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHh
Confidence            5799999999999987766666666665444333322   12388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+.........  .....++..|+||
T Consensus       146 il~~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aP  184 (294)
T 2rku_A          146 LFLNEDLEVKIGDFGLATKVEYDGER--KKVLCGTPNYIAP  184 (294)
T ss_dssp             EEECTTCCEEECCCTTCEECCSTTCC--BCCCCSCCSSCCH
T ss_pred             EEEcCCCCEEEEeccCceecccCccc--cccccCCCCcCCc
Confidence                      4899988765433222  2345678889887

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.72  E-value=2e-18  Score=102.82  Aligned_cols=101  Identities=18%  Similarity=0.321  Sum_probs=70.1

Q ss_pred             ccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC---
Q 047898            4 ENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN---   80 (111)
Q Consensus         4 ~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n---   80 (111)
                      +||+++++++.......++++ +..+++...+..   ...+++.++..++.|++.|+.|+|+.   +++|+|++|+|   
T Consensus        69 ~~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll  141 (343)
T 3dbq_A           69 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLI  141 (343)
T ss_dssp             TTBCCEEEEEECSSEEEEEEC-CCSEEHHHHHHH---SCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEE
T ss_pred             CceEEEeeeEeeCCEEEEEEe-CCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEE
Confidence            999999999988665444444 223333333322   23488899999999999999999999   99999999999   


Q ss_pred             ------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                            ++|||+++...............||+.|+||
T Consensus       142 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aP  178 (343)
T 3dbq_A          142 VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPP  178 (343)
T ss_dssp             ETTEEEECCCSSSCCC------------CCCCSSCCH
T ss_pred             ECCcEEEeecccccccCcccccccCCCCcCCcCcCCH
Confidence                  4899999876544332223456789999997

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.72  E-value=1.2e-18  Score=102.92  Aligned_cols=108  Identities=21%  Similarity=0.272  Sum_probs=66.7

Q ss_pred             CCCccceeeeeeeeeCCcc------chhhhhhhhhhcccCcCCC---CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCe
Q 047898            1 LKHENLVELLGYCVEGNLR------DELIWIIHVITCKKGVQGA---QPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSI   71 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i   71 (111)
                      ++||||+++++++......      ..+++++..+++...+...   .....+++.++..++.|++.|+.|+|+.   ++
T Consensus        82 l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i  158 (323)
T 3qup_A           82 FDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NF  158 (323)
T ss_dssp             CCCTTBCCCCEEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TC
T ss_pred             CCCCceehhhceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---Cc
Confidence            5799999999999876544      3444555444443332211   1122488999999999999999999999   99


Q ss_pred             eecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           72 IQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        72 ~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +|+|++|+|          ++|||.++...............+++.|+||
T Consensus       159 vH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aP  208 (323)
T 3qup_A          159 IHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLAL  208 (323)
T ss_dssp             CCSCCSGGGEEECTTSCEEECCCCC-----------------CCGGGCCH
T ss_pred             ccCCCCcceEEEcCCCCEEEeeccccccccccccccccccccCcccccCc
Confidence            999999999          4899998765443322112234456778887

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.72  E-value=3.8e-18  Score=98.84  Aligned_cols=102  Identities=22%  Similarity=0.265  Sum_probs=77.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+...++++++..+.+...+..   ...+++.++..++.|++.|+.|+|++   +++|+|++|+|
T Consensus        63 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~N  136 (277)
T 3f3z_A           63 LDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVH---KRVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPEN  136 (277)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred             CCCCCEeeEEEEEecCCeEEEEEeccCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHH
Confidence            5799999999999987766666666654444333322   22388999999999999999999999   99999999999


Q ss_pred             -------------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 -------------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 -------------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                   ++|||.+........   .....+|+.|+||
T Consensus       137 il~~~~~~~~~~~l~Dfg~~~~~~~~~~---~~~~~~t~~y~aP  177 (277)
T 3f3z_A          137 FLFLTDSPDSPLKLIDFGLAARFKPGKM---MRTKVGTPYYVSP  177 (277)
T ss_dssp             EEESSSSTTCCEEECCCTTCEECCTTSC---BCCCCSCTTTCCH
T ss_pred             EEEecCCCCCcEEEEecccceeccCccc---hhccCCCCCccCh
Confidence                         378888765543322   2345688889987

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.72  E-value=1.6e-17  Score=98.47  Aligned_cols=103  Identities=18%  Similarity=0.245  Sum_probs=76.6

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +||||+++++++...+...++++++..+.+...+... ....+++.++..++.|++.|+.|+|++   +++|+|++|+| 
T Consensus        87 ~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NI  162 (327)
T 3lm5_A           87 SCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPE-LAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNI  162 (327)
T ss_dssp             TCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGGSSC-C-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGE
T ss_pred             CCCCEEEEEEEEEeCCeEEEEEEecCCCcHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHE
Confidence            4799999999999877666777777766665555432 223489999999999999999999999   99999999999 


Q ss_pred             ------------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ------------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ------------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                  ++|||.++.......   .....+|+.|+||
T Consensus       163 l~~~~~~~~~~kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aP  202 (327)
T 3lm5_A          163 LLSSIYPLGDIKIVDFGMSRKIGHACE---LREIMGTPEYLAP  202 (327)
T ss_dssp             EESCBTTBCCEEECCGGGCEEC------------CCCGGGCCH
T ss_pred             EEecCCCCCcEEEeeCccccccCCccc---cccccCCcCccCC
Confidence                        378888876543322   2345688999987

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.71  E-value=4e-18  Score=104.80  Aligned_cols=102  Identities=25%  Similarity=0.335  Sum_probs=75.2

Q ss_pred             CCCccceeeeeeeeeCC-ccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEGN-LRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~   79 (111)
                      ++||||+++++++.... ...++.+++..+++...+... ....++..++..++.|++.|+.|+|++   +++|+|++++
T Consensus       243 l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~  318 (450)
T 1k9a_A          243 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAAR  318 (450)
T ss_dssp             CCCTTBCCEEEEEECTTSCEEEEEECCTTCBHHHHHHHH-CTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGG
T ss_pred             ccCCCEEEEEEEEEcCCCceEEEEEecCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHh
Confidence            58999999999987654 345566777666665554432 222378899999999999999999999   9999999999


Q ss_pred             C----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           80 N----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |          ++|||+++......     ....++..|+||
T Consensus       319 Nill~~~~~~kl~DfG~a~~~~~~~-----~~~~~~~~y~aP  355 (450)
T 1k9a_A          319 NVLVSEDNVAKVSDFGLTKEASSTQ-----DTGKLPVKWTAP  355 (450)
T ss_dssp             GEEECTTSCEEECCCTTCEECC-----------CCCTTTSCH
T ss_pred             hEEECCCCCEEEeeCCCcccccccc-----cCCCCCcceeCH
Confidence            9          48999987543221     223567789887

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.71  E-value=2.9e-18  Score=102.63  Aligned_cols=103  Identities=23%  Similarity=0.177  Sum_probs=79.2

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +||||+++++++...+...++++++..+++...+...   ..++..++..++.|++.|+.|||++   +++|+|++|+| 
T Consensus       117 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NI  190 (355)
T 1vzo_A          117 QSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQR---ERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENI  190 (355)
T ss_dssp             TCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGE
T ss_pred             CCCceeEEEEEEeeCceEEEEeecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHE
Confidence            5999999999999877666676776655554444321   2388999999999999999999999   99999999999 


Q ss_pred             ---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                               ++|||+++........ ......||+.|+||
T Consensus       191 ll~~~~~~kl~DfG~a~~~~~~~~~-~~~~~~gt~~y~aP  229 (355)
T 1vzo_A          191 LLDSNGHVVLTDFGLSKEFVADETE-RAYDFCGTIEYMAP  229 (355)
T ss_dssp             EECTTSCEEESCSSEEEECCGGGGG-GGCGGGSCCTTCCH
T ss_pred             EECCCCcEEEeeCCCCeecccCCCC-cccCcccCcCccCh
Confidence                     4899998765433221 12345789999987

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.71  E-value=9.6e-18  Score=97.94  Aligned_cols=106  Identities=19%  Similarity=0.242  Sum_probs=77.1

Q ss_pred             CCCccceeeeeeeeeCCcc-chhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLR-DELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~   79 (111)
                      ++||||+++++++...+.. ..+++++..+++...+...  ...+++.++..++.|++.|+.|+|++   +++|+|++|+
T Consensus        79 l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~  153 (298)
T 3pls_A           79 LNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSP--QRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAAR  153 (298)
T ss_dssp             CCCTTBCCCCEEECCSSSCCEEEECCCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGG
T ss_pred             CCCCCeeeEEEEEecCCCCcEEEEecccCCCHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcc
Confidence            5799999999999865544 4455555555554444332  23378899999999999999999999   9999999999


Q ss_pred             C----------cCCCcccccCCCCcccc--cccccCccccccCC
Q 047898           80 N----------IADFNLSNQAPNMAARL--HSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n----------i~~~g~~~~~~~~~~~~--~~~~~~~~~~~~aP  111 (111)
                      |          ++|||.++.........  ......++..|+||
T Consensus       154 Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aP  197 (298)
T 3pls_A          154 NCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTAL  197 (298)
T ss_dssp             GEEECTTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCH
T ss_pred             eEEEcCCCcEEeCcCCCcccccCCcccccccCcCCCCCccccCh
Confidence            9          48999987654432111  12334567788876

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.71  E-value=7.1e-18  Score=99.63  Aligned_cols=102  Identities=21%  Similarity=0.272  Sum_probs=78.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.+.....++.+++..+++...+..   ...++...+..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        72 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~N  145 (321)
T 2a2a_A           72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPEN  145 (321)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHT---CSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred             CCCCCcceEEEEEecCCEEEEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHH
Confidence            5799999999999987766666666655555444432   23388999999999999999999999   99999999999


Q ss_pred             c--------------CCCcccccCCCCcccccccccCccccccCC
Q 047898           81 I--------------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 i--------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |              +|||.+........   .....||+.|+||
T Consensus       146 Il~~~~~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~gt~~y~aP  187 (321)
T 2a2a_A          146 IMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FKNIFGTPEFVAP  187 (321)
T ss_dssp             EEESCTTSSSCCEEECCCTTCEECCTTCC---CCCCCSCGGGCCH
T ss_pred             EEEecCCCCcCCEEEccCccceecCcccc---ccccCCCCCccCc
Confidence            3              67888765543321   2345688899987

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.71  E-value=1.8e-18  Score=100.72  Aligned_cols=100  Identities=16%  Similarity=0.262  Sum_probs=75.1

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+...++++++..+++...+...  ...++...+..++.|++.|+.|+|++   +++|+|++|+|
T Consensus        69 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~N  143 (289)
T 4fvq_A           69 LSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKN--KNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKN  143 (289)
T ss_dssp             SCCTTBCCEEEEECCTTCCEEEEECCTTCBHHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGG
T ss_pred             CCCCCEeEEEEEEEeCCCCEEEEECCCCCCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcce
Confidence            58999999999999877666676777666555544322  22278899999999999999999999   99999999999


Q ss_pred             c------------------CCCcccccCCCCcccccccccCccccccCC
Q 047898           81 I------------------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 i------------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |                  +|||.+......      ....++..|+||
T Consensus       144 Ill~~~~~~~~~~~~~~kl~Dfg~~~~~~~~------~~~~~~~~y~aP  186 (289)
T 4fvq_A          144 ILLIREEDRKTGNPPFIKLSDPGISITVLPK------DILQERIPWVPP  186 (289)
T ss_dssp             EEEEECCBGGGTBCCEEEECCCCSCTTTSCH------HHHHHTTTTSCH
T ss_pred             EEEecCCcccccccceeeeccCcccccccCc------cccCCcCcccCH
Confidence            3                  577766544222      123467778887

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.71  E-value=2.1e-18  Score=102.24  Aligned_cols=102  Identities=20%  Similarity=0.304  Sum_probs=71.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+...++++++.. .+...+.   ....++..++..++.|++.|+.|+|++   +++|+|++|+|
T Consensus        90 l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~~~---~~~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~N  162 (329)
T 3gbz_A           90 LQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMD---KNPDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQN  162 (329)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHH---HCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGG
T ss_pred             cCCCCcceEEEEEecCCEEEEEEecCCC-CHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHH
Confidence            5899999999999987766666666552 3333322   223388999999999999999999999   99999999999


Q ss_pred             c---------------CCCcccccCCCCcccccccccCccccccCC
Q 047898           81 I---------------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 i---------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |               +|||.+.........  .....+|..|+||
T Consensus       163 Ill~~~~~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~t~~y~aP  206 (329)
T 3gbz_A          163 LLLSVSDASETPVLKIGDFGLARAFGIPIRQ--FTHEIITLWYRPP  206 (329)
T ss_dssp             EEEEC-----CCEEEECCTTHHHHHC-------------CCTTCCH
T ss_pred             EEEecCCCCccceEEECcCCCccccCCcccc--cCCCcCCccccCH
Confidence            3               788887654332221  2334678889887

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.71  E-value=5.2e-18  Score=102.38  Aligned_cols=64  Identities=20%  Similarity=0.325  Sum_probs=52.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-----------cCCCcccccCCCCcccccccccCccccccC
Q 047898           42 PVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-----------IADFNLSNQAPNMAARLHSTRVLGTFSYHA  110 (111)
Q Consensus        42 ~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~a  110 (111)
                      ..+++..+..++.|++.|+.|+|+.   +++|+|++|+|           ++|||.++.......   .....+|..|+|
T Consensus       136 ~~l~~~~~~~i~~qi~~aL~~LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~a  209 (383)
T 3eb0_A          136 RSIPMNLISIYIYQLFRAVGFIHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP---SVAYICSRFYRA  209 (383)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC---CCCCCCCSSCCC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC---CcCcccCCCccC
Confidence            3488999999999999999999999   99999999999           489999876544332   234567888998


Q ss_pred             C
Q 047898          111 P  111 (111)
Q Consensus       111 P  111 (111)
                      |
T Consensus       210 P  210 (383)
T 3eb0_A          210 P  210 (383)
T ss_dssp             H
T ss_pred             H
Confidence            7

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.71  E-value=5.4e-18  Score=98.35  Aligned_cols=101  Identities=30%  Similarity=0.457  Sum_probs=73.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.+.+...++.+++..+.+...+...   ..++..++..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        66 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~N  139 (279)
T 3fdn_A           66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHSK---RVIHRDIKPEN  139 (279)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGG
T ss_pred             CCCCCCcchhheEecCCEEEEEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHh
Confidence            57999999999999877666666666655444333221   2388899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                +.|||.+.......    .....++..|+||
T Consensus       140 ili~~~~~~~l~Dfg~~~~~~~~~----~~~~~~~~~y~aP  176 (279)
T 3fdn_A          140 LLLGSAGELKIADFGWSVHAPSSR----RTDLCGTLDYLPP  176 (279)
T ss_dssp             EEECTTSCEEECSCCEESCC------------CCCCTTCCH
T ss_pred             EEEcCCCCEEEEeccccccCCccc----ccccCCCCCccCH
Confidence                      48999875443322    2334678888887

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.71  E-value=1.9e-18  Score=106.32  Aligned_cols=105  Identities=17%  Similarity=0.250  Sum_probs=76.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.. +...++++++..+++...+.... ...++..++..++.|++.|+.|||++   +++|+|++++|
T Consensus       240 l~h~~iv~l~~~~~~-~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~N  314 (454)
T 1qcf_A          240 LQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAAN  314 (454)
T ss_dssp             CCCTTBCCEEEEECS-SSCEEEECCCTTCBHHHHHHSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGG
T ss_pred             CCCCCEeeEEEEEeC-CccEEEEeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHH
Confidence            589999999999873 44556666666666655543221 12378889999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++........ ......++..|+||
T Consensus       315 ill~~~~~~kl~DFG~a~~~~~~~~~-~~~~~~~~~~y~aP  354 (454)
T 1qcf_A          315 ILVSASLVCKIADFGLARVIEDNEYT-AREGAKFPIKWTAP  354 (454)
T ss_dssp             EEECTTCCEEECSTTGGGGBCCHHHH-TTCSSSSCGGGSCH
T ss_pred             EEECCCCcEEEeeCCCceEcCCCcee-ccCCCcccccccCH
Confidence                      4899999866433211 12233457789987

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.71  E-value=5e-18  Score=98.62  Aligned_cols=105  Identities=21%  Similarity=0.267  Sum_probs=78.5

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.+.+...++.+++..+.+...+...  ...+++.++..++.|++.|+.|+|++   +++|+|++|+|
T Consensus        76 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~N  150 (283)
T 3gen_A           76 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARN  150 (283)
T ss_dssp             CCCTTBCCEEEEECSSSSEEEEECCCTTCBHHHHHHCG--GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGG
T ss_pred             CCCCCEeeEEEEEecCCCeEEEEeccCCCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccce
Confidence            57999999999998877666666766665555444332  22388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+......... ......+|+.|+||
T Consensus       151 ili~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aP  190 (283)
T 3gen_A          151 CLVNDQGVVKVSDFGLSRYVLDDEYT-SSVGSKFPVRWSPP  190 (283)
T ss_dssp             EEECTTSCEEECSTTGGGGBCCHHHH-STTSTTSCGGGCCH
T ss_pred             EEEcCCCCEEEccccccccccccccc-cccCCccCcccCCH
Confidence                      4899998765443221 12233456778887

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.71  E-value=3.1e-17  Score=97.66  Aligned_cols=103  Identities=19%  Similarity=0.237  Sum_probs=79.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccC------cCCCCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeee
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKG------VQGAQPSPVLDWMTRVRIVVDALRGLEYLHE-KVQPSIIQ   73 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~-~~~~~i~h   73 (111)
                      ++||||+++++++...+...++++++..+++...      +.. .....+++..+..++.|++.|+.|+|+ .   +++|
T Consensus       100 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~-~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H  175 (348)
T 2pml_X          100 IKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDK-NYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICH  175 (348)
T ss_dssp             CCCTTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCS-SSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEEC
T ss_pred             CCCCCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhh-ccccCCCHHHHHHHHHHHHHHHHHHhccC---CEee
Confidence            5799999999999987766666677666665554      222 113458999999999999999999999 8   9999


Q ss_pred             cCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           74 RDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        74 ~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +|++++|          ++|||.+.......    .....++..|+||
T Consensus       176 ~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~y~aP  219 (348)
T 2pml_X          176 RDVKPSNILMDKNGRVKLSDFGESEYMVDKK----IKGSRGTYEFMPP  219 (348)
T ss_dssp             CCCCGGGEEECTTSCEEECCCTTCEECBTTE----ECSSCSCGGGCCG
T ss_pred             cCCChHhEEEcCCCcEEEecccccccccccc----ccCCCCCcCccCc
Confidence            9999999          48999887653331    2345678888887

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.71  E-value=1.6e-18  Score=102.22  Aligned_cols=108  Identities=16%  Similarity=0.255  Sum_probs=77.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCC-------CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeee
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGA-------QPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQ   73 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h   73 (111)
                      ++||||+++++++...+...++++++..+++...+...       .....+++.++..++.|++.|+.|+|++   +++|
T Consensus        85 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H  161 (322)
T 1p4o_A           85 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVH  161 (322)
T ss_dssp             CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBC
T ss_pred             cCCCCEeeeEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCcc
Confidence            57999999999998877666666666555444333211       1113368889999999999999999999   9999


Q ss_pred             cCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           74 RDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        74 ~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +|++|+|          ++|||.++...............+++.|+||
T Consensus       162 ~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  209 (322)
T 1p4o_A          162 RDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP  209 (322)
T ss_dssp             SCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCH
T ss_pred             CCCccceEEEcCCCeEEECcCccccccccccccccccCCCCCCCccCh
Confidence            9999999          4899988755433222112334567788887

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.70  E-value=7.7e-18  Score=100.41  Aligned_cols=104  Identities=20%  Similarity=0.221  Sum_probs=75.6

Q ss_pred             CCCccceeeeeeeee----CCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCC
Q 047898            1 LKHENLVELLGYCVE----GNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDI   76 (111)
Q Consensus         1 l~h~~iv~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l   76 (111)
                      ++||||+++++++..    .....++++++ .+++...+...   ..+++.++..++.|++.|+.|+|+.   +++|+|+
T Consensus       105 l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dl  177 (345)
T 2v62_A          105 LDYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQN---GTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDI  177 (345)
T ss_dssp             CSCCCCCCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGG---GBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             ccccCcceeecccccccCCCcEEEEEEecc-CCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCc
Confidence            479999999999987    33334444555 44444433322   2489999999999999999999999   9999999


Q ss_pred             CCCC------------cCCCcccccCCCCcccc-----cccccCccccccCC
Q 047898           77 RSSN------------IADFNLSNQAPNMAARL-----HSTRVLGTFSYHAP  111 (111)
Q Consensus        77 ~~~n------------i~~~g~~~~~~~~~~~~-----~~~~~~~~~~~~aP  111 (111)
                      +|+|            ++|||+++.........     ......||..|+||
T Consensus       178 kp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  229 (345)
T 2v62_A          178 KAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSL  229 (345)
T ss_dssp             SGGGEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCH
T ss_pred             CHHHEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCH
Confidence            9999            37899987654322110     12345789999987

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.70  E-value=3.3e-18  Score=108.88  Aligned_cols=104  Identities=21%  Similarity=0.300  Sum_probs=74.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||++++++.... ..++++++..+++...+..   ...+++.++..++.|++.|+.|||++   +++|+||+++|
T Consensus       427 l~hpnIv~l~~~~~~~~-~~lv~E~~~~g~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~N  499 (635)
T 4fl3_A          427 LDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARN  499 (635)
T ss_dssp             CCCTTBCCEEEEEESSS-EEEEEECCTTEEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGG
T ss_pred             CCCCCEeeEEEEEecCC-EEEEEEccCCCCHHHHHhh---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHh
Confidence            58999999999997543 4456666666665555432   23388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccc-cccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARL-HSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~-~~~~~~~~~~~~aP  111 (111)
                                |+|||+++......... ......+|+.|+||
T Consensus       500 ILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~AP  541 (635)
T 4fl3_A          500 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP  541 (635)
T ss_dssp             EEEEETTEEEECCTTHHHHTTC-------------CGGGSCH
T ss_pred             EEEeCCCCEEEEEcCCccccccCccccccccCCCCceeeeCh
Confidence                      48999988665433211 12233467789987

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.70  E-value=4.9e-18  Score=97.98  Aligned_cols=105  Identities=19%  Similarity=0.252  Sum_probs=77.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.......++++++..+++...+...  ...+++.++..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        60 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~N  134 (268)
T 3sxs_A           60 LSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSH--GKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARN  134 (268)
T ss_dssp             CCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGG
T ss_pred             CCCCCEeeEEEEEccCCceEEEEEccCCCcHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcce
Confidence            57999999999998876666666666655444443221  12388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+......... ......++..|+||
T Consensus       135 il~~~~~~~~l~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aP  174 (268)
T 3sxs_A          135 CLVDRDLCVKVSDFGMTRYVLDDQYV-SSVGTKFPVKWSAP  174 (268)
T ss_dssp             EEECTTCCEEECCTTCEEECCTTCEE-ECCSCCCCGGGCCH
T ss_pred             EEECCCCCEEEccCccceecchhhhh-cccCCCcCcccCCH
Confidence                      4899988765443321 12233456778887

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.70  E-value=6.2e-18  Score=101.86  Aligned_cols=106  Identities=17%  Similarity=0.272  Sum_probs=68.5

Q ss_pred             CCCccceeeeeeeeeCC-ccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEGN-LRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~   79 (111)
                      ++||||+++++++...+ ...++.+++..+++...+...  ...+++.++..++.|++.|+.|+|++   +++|+|++|+
T Consensus       147 l~hpnIv~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~  221 (373)
T 3c1x_A          147 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAAR  221 (373)
T ss_dssp             CCCTTBCCCCEEECCCSSCCEEEEECCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGG
T ss_pred             CCCCCcceEEEEEEcCCCCeEEEEECCCCCCHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchh
Confidence            57999999999976543 344566666666665555432  23378889999999999999999999   9999999999


Q ss_pred             C----------cCCCcccccCCCCcccc--cccccCccccccCC
Q 047898           80 N----------IADFNLSNQAPNMAARL--HSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n----------i~~~g~~~~~~~~~~~~--~~~~~~~~~~~~aP  111 (111)
                      |          ++|||+++.........  ......+|..|+||
T Consensus       222 NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aP  265 (373)
T 3c1x_A          222 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL  265 (373)
T ss_dssp             GEEECTTCCEEECCC---------------------CCGGGSCH
T ss_pred             eEEECCCCCEEEeeccccccccccccccccccCCCCCcccccCh
Confidence            9          48999987654332111  11234567789987

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.70  E-value=1.1e-17  Score=99.12  Aligned_cols=104  Identities=17%  Similarity=0.294  Sum_probs=78.0

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +||||+++++++.......++.+++ .+++...+...  ...+++.++..++.|++.|+.|+|+.   +++|+|++|+| 
T Consensus        63 ~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Ni  136 (330)
T 2izr_A           63 SGDGIPQVYYFGPCGKYNAMVLELL-GPSLEDLFDLC--DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENF  136 (330)
T ss_dssp             SCTTSCCEEEEEEETTEEEEEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGE
T ss_pred             CCCCCCEEEEEEecCCccEEEEEeC-CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHe
Confidence            7999999999999877666666666 44444443322  23489999999999999999999999   99999999999 


Q ss_pred             --------------cCCCcccccCCCCcccc-----cccccCccccccCC
Q 047898           81 --------------IADFNLSNQAPNMAARL-----HSTRVLGTFSYHAP  111 (111)
Q Consensus        81 --------------i~~~g~~~~~~~~~~~~-----~~~~~~~~~~~~aP  111 (111)
                                    ++|||+++.........     ......||+.|+||
T Consensus       137 ll~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  186 (330)
T 2izr_A          137 LIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSI  186 (330)
T ss_dssp             EECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCH
T ss_pred             eeccCCCCCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccCh
Confidence                          37899887654332210     12356789999997

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.70  E-value=3e-18  Score=105.38  Aligned_cols=105  Identities=21%  Similarity=0.285  Sum_probs=72.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.. +...++++++..+++...+... ....+++.++..++.|++.|+.|+|++   +++|+|++++|
T Consensus       236 l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~N  310 (452)
T 1fmk_A          236 LRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAAN  310 (452)
T ss_dssp             CCCTTBCCEEEEECS-SSCEEEECCCTTCBHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGG
T ss_pred             CCCCCEeeEEEEEcC-CceEEEehhhcCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhh
Confidence            589999999999976 4455566666666665554321 112378899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++........ ......++..|+||
T Consensus       311 ill~~~~~~kl~DfG~a~~~~~~~~~-~~~~~~~~~~y~aP  350 (452)
T 1fmk_A          311 ILVGENLVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAP  350 (452)
T ss_dssp             EEECGGGCEEECCCCTTC---------------CCGGGSCH
T ss_pred             EEECCCCCEEECCCccceecCCCcee-cccCCcccccccCH
Confidence                      4899998765432211 12233467789987

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.70  E-value=3e-18  Score=99.81  Aligned_cols=105  Identities=20%  Similarity=0.275  Sum_probs=74.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCC-CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGA-QPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~   79 (111)
                      ++||||+++++++.+.....++.+++..+++...+... .....++...+..++.|++.|+.|+|+.   +++|+|++|+
T Consensus        77 l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~  153 (285)
T 3is5_A           77 LDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPE  153 (285)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGG
T ss_pred             CCCchHHhHHHheecCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHH
Confidence            58999999999999877666666666554443332211 1123388999999999999999999999   9999999999


Q ss_pred             C-------------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           80 N-------------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n-------------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |             ++|||.+........   .....++..|+||
T Consensus       154 NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aP  195 (285)
T 3is5_A          154 NILFQDTSPHSPIKIIDFGLAELFKSDEH---STNAAGTALYMAP  195 (285)
T ss_dssp             GEEESSSSTTCCEEECCCCCCCC-------------CTTGGGCCH
T ss_pred             HEEEecCCCCCCEEEEeeecceecCCccc---CcCcccccCcCCh
Confidence            9             378888865543322   2345688889987

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.70  E-value=9.3e-18  Score=97.47  Aligned_cols=102  Identities=21%  Similarity=0.305  Sum_probs=76.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++........+++++..+.+...+..   ...++...+..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        62 l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~N  135 (284)
T 3kk8_A           62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA---REFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPEN  135 (284)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGG
T ss_pred             cCCCCcCeEEEEEEcCCEEEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHH
Confidence            5899999999999887766666666654443332221   12388999999999999999999999   99999999999


Q ss_pred             -------------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 -------------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 -------------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                   ++|||.+........   .....+++.|+||
T Consensus       136 il~~~~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aP  176 (284)
T 3kk8_A          136 LLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAGTPGYLSP  176 (284)
T ss_dssp             EEESSSSTTCCEEECCCTTCEECCSSCB---CCCSCSCGGGCCH
T ss_pred             EEEecCCCCCcEEEeeceeeEEcccCcc---ccCCCCCcCCcCc
Confidence                         378888765543322   2345688889987

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.70  E-value=7e-18  Score=99.25  Aligned_cols=108  Identities=21%  Similarity=0.303  Sum_probs=68.0

Q ss_pred             CCCccceeeeeeeeeCCcc-----chhhhhhhhhhcccCcCC---CCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCee
Q 047898            1 LKHENLVELLGYCVEGNLR-----DELIWIIHVITCKKGVQG---AQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSII   72 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~   72 (111)
                      ++||||+++++++......     ..+++++..+++...+..   ......+++.++..++.|++.|+.|+|++   +++
T Consensus        93 l~h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~iv  169 (313)
T 3brb_A           93 FSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFL  169 (313)
T ss_dssp             CCCTTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCC
T ss_pred             CCCCCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence            5799999999999875533     344455554444333311   12234489999999999999999999999   999


Q ss_pred             ecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           73 QRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        73 h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |+|++|+|          ++|||.+................+++.|+||
T Consensus       170 H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  218 (313)
T 3brb_A          170 HRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI  218 (313)
T ss_dssp             CCCCSGGGEEECTTSCEEECSCSCC----------------CCGGGSCH
T ss_pred             cCCCCcceEEEcCCCcEEEeecCcceecccccccCcccccCCCccccCc
Confidence            99999999          4899988765443221112234566778876

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.70  E-value=9.2e-18  Score=97.86  Aligned_cols=105  Identities=24%  Similarity=0.424  Sum_probs=66.3

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.... ...+++++..+++...+..  ....+++.++..++.|++.|+.|+|+.   +++|+|++++|
T Consensus        77 l~h~~iv~~~~~~~~~~-~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~N  150 (289)
T 3og7_A           77 TRHVNILLFMGYSTAPQ-LAIVTQWCEGSSLYHHLHA--SETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNN  150 (289)
T ss_dssp             CCCTTBCCEEEEECSSS-CEEEEECCCEEEHHHHHTT--C---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGG
T ss_pred             CCCCcEEEEEeeccCCc-cEEEEEecCCCcHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccce
Confidence            57999999999765433 4455555555544444332  223388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+................||+.|+||
T Consensus       151 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aP  191 (289)
T 3og7_A          151 IFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP  191 (289)
T ss_dssp             EEEETTTEEEECCCC------------------CCCTTCCH
T ss_pred             EEECCCCCEEEccceeccccccccccccccccCCCccccCc
Confidence                      4899988755432222123345688889887

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.70  E-value=8.9e-18  Score=97.72  Aligned_cols=106  Identities=23%  Similarity=0.301  Sum_probs=79.1

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.......++++++..+++...+... ....+++..+..++.|++.|+.++|+.   +++|+|++|+|
T Consensus        66 l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~N  141 (288)
T 3kfa_A           66 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARN  141 (288)
T ss_dssp             CCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHC-CTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGG
T ss_pred             CCCCCEeeEEEEEccCCCEEEEEEcCCCCcHHHHHHhc-ccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcce
Confidence            57999999999998877666666666655555444332 223388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                +.|||.+......... ......+++.|+||
T Consensus       142 il~~~~~~~~l~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aP  181 (288)
T 3kfa_A          142 CLVGENHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTAP  181 (288)
T ss_dssp             EEECGGGCEEECCCCGGGTSCSSSSE-EETTEEECGGGCCH
T ss_pred             EEEcCCCCEEEccCccceeccCCccc-cccCCccccCcCCh
Confidence                      4899998766543321 12233456778887

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.70  E-value=1.2e-17  Score=100.84  Aligned_cols=102  Identities=26%  Similarity=0.376  Sum_probs=70.6

Q ss_pred             CCccceeeeeeeeeCCc--cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 047898            2 KHENLVELLGYCVEGNL--RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSS   79 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~   79 (111)
                      +||||+++++++...+.  ..++++++. +.+...+.    ...++......++.|++.|+.|+|+.   +++|||++|+
T Consensus        67 ~h~niv~l~~~~~~~~~~~~~lv~e~~~-~~L~~~~~----~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~  138 (388)
T 3oz6_A           67 GHENIVNLLNVLRADNDRDVYLVFDYME-TDLHAVIR----ANILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPS  138 (388)
T ss_dssp             TCTTBCCEEEEEECTTSSCEEEEEECCS-EEHHHHHH----HTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGG
T ss_pred             CCCCCCeeeeEEecCCCCEEEEEecccC-cCHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHH
Confidence            39999999999986442  233444444 22222221    12388888999999999999999999   9999999999


Q ss_pred             C----------cCCCcccccCCCCcc-------------------cccccccCccccccCC
Q 047898           80 N----------IADFNLSNQAPNMAA-------------------RLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n----------i~~~g~~~~~~~~~~-------------------~~~~~~~~~~~~~~aP  111 (111)
                      |          ++|||+++.......                   .......+||++|+||
T Consensus       139 NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  199 (388)
T 3oz6_A          139 NILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAP  199 (388)
T ss_dssp             GEEECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCH
T ss_pred             HeEEcCCCCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCH
Confidence            9          489999876532110                   0112345789999998

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.69  E-value=7.8e-18  Score=97.78  Aligned_cols=104  Identities=21%  Similarity=0.272  Sum_probs=65.3

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.+. ...++.+++..+++...+...  ...+++.++..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        73 l~h~~iv~~~~~~~~~-~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~N  146 (281)
T 1mp8_A           73 FDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARN  146 (281)
T ss_dssp             CCCTTBCCEEEEECSS-SCEEEEECCTTEEHHHHHHHT--TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGG
T ss_pred             CCCCccceEEEEEccC-ccEEEEecCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHH
Confidence            5799999999998543 344555555555544444321  22388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.++........ ......+++.|+||
T Consensus       147 il~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aP  186 (281)
T 1mp8_A          147 VLVSSNDCVKLGDFGLSRYMEDSTYY-KASKGKLPIKWMAP  186 (281)
T ss_dssp             EEEEETTEEEECC--------------------CCGGGCCH
T ss_pred             EEECCCCCEEECccccccccCccccc-ccccCCCcccccCh
Confidence                      4899998765433221 12233456778887

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.69  E-value=4.8e-18  Score=99.32  Aligned_cols=104  Identities=28%  Similarity=0.366  Sum_probs=74.8

Q ss_pred             CCCccceeeeeeeeeCCc----cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhh--------hcCC
Q 047898            1 LKHENLVELLGYCVEGNL----RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLH--------EKVQ   68 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh--------~~~~   68 (111)
                      ++||||+++++++.....    ..++.+++..+++...+.    ...+++..+..++.|++.|+.|+|        +.  
T Consensus        59 l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~--  132 (301)
T 3q4u_A           59 LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQ----LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP--  132 (301)
T ss_dssp             CCCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHHHT----TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC--
T ss_pred             ccCcCeeeEEEeeccccCCCceeEEehhhccCCCHHHHHh----hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC--
Confidence            589999999999765322    234445555555544442    224899999999999999999999        88  


Q ss_pred             CCeeecCCCCCC----------cCCCcccccCCCCcccc--cccccCccccccCC
Q 047898           69 PSIIQRDIRSSN----------IADFNLSNQAPNMAARL--HSTRVLGTFSYHAP  111 (111)
Q Consensus        69 ~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~--~~~~~~~~~~~~aP  111 (111)
                       +++|+|++|+|          ++|||.++.........  ......||+.|+||
T Consensus       133 -~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aP  186 (301)
T 3q4u_A          133 -AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP  186 (301)
T ss_dssp             -EEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCH
T ss_pred             -CeecCCCChHhEEEcCCCCEEEeeCCCeeecccccccccccccccccccceeCh
Confidence             99999999999          48999986544332211  12334789999997

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.69  E-value=8.2e-18  Score=99.01  Aligned_cols=104  Identities=22%  Similarity=0.299  Sum_probs=73.4

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCc
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI   81 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~ni   81 (111)
                      +||||+++++++...+...++++++..+++...+...   ..++..++..++.|++.|+.|+|++   +++|+|++|+||
T Consensus        69 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Ni  142 (316)
T 2ac3_A           69 GHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKR---RHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENI  142 (316)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGE
T ss_pred             CCCCeeeEEEEEeeCCEEEEEEEcCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHE
Confidence            6999999999999877666676776655554443321   2388999999999999999999999   999999999993


Q ss_pred             -------------CCCcccccCCCCccc-----ccccccCccccccCC
Q 047898           82 -------------ADFNLSNQAPNMAAR-----LHSTRVLGTFSYHAP  111 (111)
Q Consensus        82 -------------~~~g~~~~~~~~~~~-----~~~~~~~~~~~~~aP  111 (111)
                                   +|||++.........     .......||..|+||
T Consensus       143 l~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  190 (316)
T 2ac3_A          143 LCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAP  190 (316)
T ss_dssp             EESCSSSSCSEEECCTTCCC-------------------CCSGGGCCH
T ss_pred             EEccCCCcCceEEEEccCccccccCCccccccccccccccCCcCccCh
Confidence                         688887654322111     012234588999987

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.69  E-value=9.5e-18  Score=99.62  Aligned_cols=106  Identities=17%  Similarity=0.222  Sum_probs=72.8

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+...++++++..+.+...+...  ...+++.++..++.|++.|+.|+|+.   +++|+|++++|
T Consensus       103 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~N  177 (333)
T 1mqb_A          103 FSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREK--DGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARN  177 (333)
T ss_dssp             CCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHT--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGG
T ss_pred             CCCCCCCcEEEEEecCCCcEEEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhe
Confidence            57999999999998877666676777665555444322  23388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccc-cccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARL-HSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~-~~~~~~~~~~~~aP  111 (111)
                                ++|||.++......... ......++..|+||
T Consensus       178 Il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aP  219 (333)
T 1mqb_A          178 ILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAP  219 (333)
T ss_dssp             EEECTTCCEEECCCCC-----------------CCCGGGSCH
T ss_pred             EEECCCCcEEECCCCcchhhccccccccccCCCCccccccCc
Confidence                      48999987654432211 11223456778887

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.69  E-value=9.7e-18  Score=100.22  Aligned_cols=105  Identities=17%  Similarity=0.214  Sum_probs=72.0

Q ss_pred             CCCccceeeeeeeeeCCc-------cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhh--hcCCCCe
Q 047898            1 LKHENLVELLGYCVEGNL-------RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLH--EKVQPSI   71 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh--~~~~~~i   71 (111)
                      ++||||+++++++...+.       ..++++++.................++...+..++.|++.|+.|+|  +.   ++
T Consensus        76 l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~i  152 (360)
T 3e3p_A           76 LHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NV  152 (360)
T ss_dssp             HCCTTBCCEEEEEEEECSSCTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CC
T ss_pred             cCCCCcccHHHhhhccccccccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---Ce
Confidence            379999999999976433       1223333332211111111123334788889999999999999999  88   99


Q ss_pred             eecCCCCCC-----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           72 IQRDIRSSN-----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        72 ~h~~l~~~n-----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +|+|++|+|           ++|||.++.......   .....+|..|+||
T Consensus       153 vH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aP  200 (360)
T 3e3p_A          153 CHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEP---NVAYICSRYYRAP  200 (360)
T ss_dssp             BCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTSC---CCSTTSCGGGCCH
T ss_pred             ecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCCC---cccccCCcceeCH
Confidence            999999999           489999876654332   2345678889987

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.69  E-value=1.6e-17  Score=97.17  Aligned_cols=106  Identities=21%  Similarity=0.331  Sum_probs=76.0

Q ss_pred             CCCccceeeeeeeeeCC--ccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 047898            1 LKHENLVELLGYCVEGN--LRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRS   78 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~   78 (111)
                      ++||||+++++++...+  ...++.+++..+++...+...  ...++..++..++.|++.|+.++|+.   +++|+|++|
T Consensus        80 l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp  154 (302)
T 4e5w_A           80 LYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN--KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAA  154 (302)
T ss_dssp             CCCTTBCCEEEEEEC---CCEEEEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSG
T ss_pred             CCCCCeeeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCch
Confidence            57999999999998753  233455555555544443221  22388999999999999999999999   999999999


Q ss_pred             CC----------cCCCcccccCCCCccc-ccccccCccccccCC
Q 047898           79 SN----------IADFNLSNQAPNMAAR-LHSTRVLGTFSYHAP  111 (111)
Q Consensus        79 ~n----------i~~~g~~~~~~~~~~~-~~~~~~~~~~~~~aP  111 (111)
                      +|          ++|||.+......... .......+|..|+||
T Consensus       155 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aP  198 (302)
T 4e5w_A          155 RNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAP  198 (302)
T ss_dssp             GGEEEEETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCH
T ss_pred             heEEEcCCCCEEECcccccccccCCCcceeccCCCCCCccccCC
Confidence            99          4899998766544322 112345677789887

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.69  E-value=4.4e-18  Score=106.54  Aligned_cols=105  Identities=21%  Similarity=0.281  Sum_probs=77.5

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|+||+++++++.. +...++++++..+++...+.... ...+++.++..++.|++.|+.|||++   +++|+||+++|
T Consensus       319 l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~N  393 (535)
T 2h8h_A          319 LRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAAN  393 (535)
T ss_dssp             CCCTTBCCEEEEECS-SSCEEEECCCTTEEHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGG
T ss_pred             CCCCCEeeEEEEEee-ccceEeeehhcCCcHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhh
Confidence            589999999999976 44556667766666655553211 12378899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                |+|||+++....... .......++..|+||
T Consensus       394 Ill~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~~~~~y~aP  433 (535)
T 2h8h_A          394 ILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAP  433 (535)
T ss_dssp             EEECGGGCEEECCTTSTTTCCCHHH-HTTCSTTSCGGGSCH
T ss_pred             EEEcCCCcEEEcccccceecCCCce-ecccCCcCcccccCH
Confidence                      489999986643221 112233467789887

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.69  E-value=1.3e-17  Score=98.14  Aligned_cols=107  Identities=20%  Similarity=0.289  Sum_probs=76.5

Q ss_pred             CCccceeeeeeeeeCCc-cchhhhhhhhhhcccCcCCCCC-------------CCCCCHHHHHHHHHHHHHHHHHhhhcC
Q 047898            2 KHENLVELLGYCVEGNL-RDELIWIIHVITCKKGVQGAQP-------------SPVLDWMTRVRIVVDALRGLEYLHEKV   67 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------------~~~l~~~~~~~~~~~i~~~l~~lh~~~   67 (111)
                      +||||+++++++...+. ..++.+++..+++...+.....             ...+++.++..++.|++.|+.|+|+. 
T Consensus        89 ~hp~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-  167 (316)
T 2xir_A           89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-  167 (316)
T ss_dssp             CCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             cCCCeeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC-
Confidence            68999999999986543 3445555555554444332211             12278889999999999999999999 


Q ss_pred             CCCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           68 QPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        68 ~~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                        +++|+|++|+|          ++|||.++...............+|+.|+||
T Consensus       168 --~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aP  219 (316)
T 2xir_A          168 --KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP  219 (316)
T ss_dssp             --TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCH
T ss_pred             --CcccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCc
Confidence              99999999999          4899998866544332223344567889887

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.69  E-value=1.5e-17  Score=96.70  Aligned_cols=101  Identities=27%  Similarity=0.411  Sum_probs=76.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+...++.+++..+++...+...   ..++..++..++.|++.|+.|+|+.   +++|+|++++|
T Consensus        71 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~N  144 (284)
T 2vgo_A           71 LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH---GRFDEQRSATFMEELADALHYCHER---KVIHRDIKPEN  144 (284)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGG
T ss_pred             CCCCCEeeEEEEEEcCCEEEEEEEeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHH
Confidence            57999999999999877666666666555444333221   2388899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+.......    .....++..|+||
T Consensus       145 il~~~~~~~kl~Dfg~~~~~~~~~----~~~~~~~~~y~aP  181 (284)
T 2vgo_A          145 LLMGYKGELKIADFGWSVHAPSLR----RRTMCGTLDYLPP  181 (284)
T ss_dssp             EEECTTCCEEECCCTTCEECSSSC----BCCCCSCGGGCCH
T ss_pred             EEEcCCCCEEEecccccccCcccc----cccccCCCCcCCH
Confidence                      48899876543322    2345678888887

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.69  E-value=3.9e-18  Score=100.95  Aligned_cols=108  Identities=19%  Similarity=0.286  Sum_probs=76.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCC----CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQ----PSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDI   76 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l   76 (111)
                      ++||||+++++++.......++++++..+++...+....    ....+++.++..++.|++.|+.|+|+.   +++|+|+
T Consensus        90 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dl  166 (327)
T 2yfx_A           90 FNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDI  166 (327)
T ss_dssp             CCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCCCCCeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcC
Confidence            579999999999998776666667766555544433221    123488899999999999999999999   9999999


Q ss_pred             CCCCc-------------CCCcccccCCCCcccccccccCccccccCC
Q 047898           77 RSSNI-------------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        77 ~~~ni-------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +|+||             +|||.+................+++.|+||
T Consensus       167 kp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  214 (327)
T 2yfx_A          167 AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP  214 (327)
T ss_dssp             CGGGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCH
T ss_pred             CHhHEEEecCCCcceEEECccccccccccccccccCCCcCCCcceeCH
Confidence            99993             678877543222211112234567889887

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.69  E-value=2.2e-17  Score=96.53  Aligned_cols=106  Identities=18%  Similarity=0.276  Sum_probs=75.5

Q ss_pred             CCCccceeeeeeeeeCC-ccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEGN-LRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~   79 (111)
                      ++||||+++++++...+ ....+++++..+++...+...  ...++..++..++.|++.|+.|+|+.   +++|+|++|+
T Consensus        83 l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~  157 (298)
T 3f66_A           83 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAAR  157 (298)
T ss_dssp             CCCTTBCCCCEEECCSSSCCEEEEECCTTCBHHHHHHCT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGG
T ss_pred             CCCCCEeeeeeEEEcCCCceEEEEeCCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchh
Confidence            57999999999976543 334455666655555554332  23378899999999999999999999   9999999999


Q ss_pred             C----------cCCCcccccCCCCcccc--cccccCccccccCC
Q 047898           80 N----------IADFNLSNQAPNMAARL--HSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n----------i~~~g~~~~~~~~~~~~--~~~~~~~~~~~~aP  111 (111)
                      |          ++|||.+..........  ......+|+.|+||
T Consensus       158 Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aP  201 (298)
T 3f66_A          158 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL  201 (298)
T ss_dssp             GEEECTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCH
T ss_pred             eEEECCCCCEEECcccccccccccchhccccccCCCCCccccCh
Confidence            9          48999987665433211  12234567788887

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.69  E-value=4.4e-17  Score=94.88  Aligned_cols=105  Identities=21%  Similarity=0.283  Sum_probs=76.3

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.. +....+++++..+.+...+...  ...+++.++..++.|++.|+.++|+.   +++|+|++|+|
T Consensus        67 l~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~N  140 (287)
T 1u59_A           67 LDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARN  140 (287)
T ss_dssp             CCCTTBCCEEEEEES-SSEEEEEECCTTEEHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred             CCCCCEeEEEEEecC-CCcEEEEEeCCCCCHHHHHHhC--CccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchhe
Confidence            579999999999954 3344555666555555444322  23388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccc-cccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARL-HSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~-~~~~~~~~~~~~aP  111 (111)
                                ++|||.+.......... ......+|+.|+||
T Consensus       141 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aP  182 (287)
T 1u59_A          141 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAP  182 (287)
T ss_dssp             EEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCH
T ss_pred             EEEcCCCCEEECcccceeeeccCcceeeccccccccccccCH
Confidence                      48999987664432211 12233457889887

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.69  E-value=4e-17  Score=97.41  Aligned_cols=105  Identities=25%  Similarity=0.325  Sum_probs=72.8

Q ss_pred             CCCccceeeeeeeeeCCc--------cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCee
Q 047898            1 LKHENLVELLGYCVEGNL--------RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSII   72 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~   72 (111)
                      ++||||+++++++.....        ..++++++.. .+...+...  ...++..++..++.|++.|+.|+|++   +++
T Consensus        73 l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~iv  146 (351)
T 3mi9_A           73 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNV--LVKFTLSEIKRVMQMLLNGLYYIHRN---KIL  146 (351)
T ss_dssp             CCCTTBCCEEEEEEEC--------CEEEEEEECCSE-EHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred             ccCCCcccHhheeeccccccccCCceEEEEEeccCC-CHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---Cee
Confidence            579999999999987432        2234444432 222222221  22389999999999999999999999   999


Q ss_pred             ecCCCCCC----------cCCCcccccCCCCccc--ccccccCccccccCC
Q 047898           73 QRDIRSSN----------IADFNLSNQAPNMAAR--LHSTRVLGTFSYHAP  111 (111)
Q Consensus        73 h~~l~~~n----------i~~~g~~~~~~~~~~~--~~~~~~~~~~~~~aP  111 (111)
                      |+|++|+|          ++|||.++........  .......+|+.|+||
T Consensus       147 H~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aP  197 (351)
T 3mi9_A          147 HRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPP  197 (351)
T ss_dssp             CCCCSGGGEEECTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCH
T ss_pred             CCCCCHHHEEEcCCCCEEEccchhcccccccccccccccCCcccccCccCc
Confidence            99999999          4899998765432211  112345678999987

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.69  E-value=2.7e-17  Score=97.33  Aligned_cols=104  Identities=25%  Similarity=0.303  Sum_probs=76.1

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCC-------------CCCCCCHHHHHHHHHHHHHHHHHhhhcCC
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQ-------------PSPVLDWMTRVRIVVDALRGLEYLHEKVQ   68 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~~~~~~~~~~i~~~l~~lh~~~~   68 (111)
                      +||||+++++++...+...++++++..+++...+....             ....+++.++..++.|++.|+.|+|+.  
T Consensus        84 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--  161 (327)
T 1fvr_A           84 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK--  161 (327)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             CCCchhhhceeeeeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC--
Confidence            79999999999998776666667766655554443321             123488999999999999999999999  


Q ss_pred             CCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           69 PSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        69 ~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                       +++|+|++|+|          ++|||+++.......   .....++..|+||
T Consensus       162 -~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~~~---~~~~~~~~~y~aP  210 (327)
T 1fvr_A          162 -QFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVK---KTMGRLPVRWMAI  210 (327)
T ss_dssp             -TEECSCCSGGGEEECGGGCEEECCTTCEESSCEECC---C----CCTTTCCH
T ss_pred             -CccCCCCccceEEEcCCCeEEEcccCcCcccccccc---ccCCCCCccccCh
Confidence             99999999999          489998864332211   1223456778886

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.69  E-value=1.8e-17  Score=99.52  Aligned_cols=101  Identities=19%  Similarity=0.267  Sum_probs=79.1

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +||||+++++++...+...++++++..+.+...+..   ...+++..+..++.|++.|+.|+|+.   +++|+|++|.| 
T Consensus       158 ~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NI  231 (365)
T 2y7j_A          158 GHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTE---KVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENI  231 (365)
T ss_dssp             TCTTBCCEEEEEEBSSEEEEEECCCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGE
T ss_pred             CCCCEeEEEEEEeeCCEEEEEEEeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHE
Confidence            699999999999987766667777766555444332   12388999999999999999999999   99999999999 


Q ss_pred             ---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                               +.|||++........   .....||+.|+||
T Consensus       232 l~~~~~~ikl~DfG~~~~~~~~~~---~~~~~gt~~y~aP  268 (365)
T 2y7j_A          232 LLDDNMQIRLSDFGFSCHLEPGEK---LRELCGTPGYLAP  268 (365)
T ss_dssp             EECTTCCEEECCCTTCEECCTTCC---BCCCCSCGGGCCH
T ss_pred             EECCCCCEEEEecCcccccCCCcc---cccCCCCCCccCh
Confidence                     489998876544322   2345788999987

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.69  E-value=2e-17  Score=97.31  Aligned_cols=104  Identities=25%  Similarity=0.305  Sum_probs=78.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+...++.+++..+.+...+..  ....++..++..++.+++.|+.|+|+.   +++|+|++|+|
T Consensus        81 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~N  155 (314)
T 3com_A           81 CDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRL--RNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGN  155 (314)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHH--HTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred             CCCCCCccEEEEEEeCCEEEEEeecCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHH
Confidence            5799999999999987766666666665554443321  123388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+.........  .....++..|+||
T Consensus       156 il~~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aP  194 (314)
T 3com_A          156 ILLNTEGHAKLADFGVAGQLTDTMAK--RNTVIGTPFWMAP  194 (314)
T ss_dssp             EEECTTCCEEECCCTTCEECBTTBSC--BCCCCSCGGGCCH
T ss_pred             EEECCCCCEEEeecccchhhhhhccc--cCccCCCCCccCh
Confidence                      4899988655433221  2345678889887

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.69  E-value=4.2e-18  Score=99.48  Aligned_cols=106  Identities=23%  Similarity=0.357  Sum_probs=71.5

Q ss_pred             CCCccceeeeeeeeeCC--ccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 047898            1 LKHENLVELLGYCVEGN--LRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRS   78 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~   78 (111)
                      ++||||+++++++...+  ...++++++..+++...+....  ..+++.++..++.|++.|+.|+|+.   +++|+|++|
T Consensus        68 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp  142 (295)
T 3ugc_A           68 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLAT  142 (295)
T ss_dssp             CCCTTBCCEEEEECHHHHTSCEEEEECCTTCBHHHHHHHCG--GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSG
T ss_pred             CCCCCEeeEEEEEecCCCCceEEEEEeCCCCCHHHHHHhcc--cccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCH
Confidence            58999999999986532  2334555555555544443221  2388899999999999999999999   999999999


Q ss_pred             CC----------cCCCcccccCCCCcccc-cccccCccccccCC
Q 047898           79 SN----------IADFNLSNQAPNMAARL-HSTRVLGTFSYHAP  111 (111)
Q Consensus        79 ~n----------i~~~g~~~~~~~~~~~~-~~~~~~~~~~~~aP  111 (111)
                      +|          ++|||.+.......... ......++..|+||
T Consensus       143 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aP  186 (295)
T 3ugc_A          143 RNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAP  186 (295)
T ss_dssp             GGEEEEETTEEEECCCCSCC-------------CTTCGGGGCCH
T ss_pred             hhEEEcCCCeEEEccCcccccccCCcceeeeccCCCCccceeCc
Confidence            99          48999988664432211 12334567778887

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.68  E-value=3.8e-17  Score=96.24  Aligned_cols=106  Identities=28%  Similarity=0.365  Sum_probs=75.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+....+.+++..+.+...+...  ...+++.++..++.|++.|+.|+|+.   +++|+|++++|
T Consensus        86 l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~N  160 (319)
T 2y4i_B           86 TRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDA--KIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKN  160 (319)
T ss_dssp             CCCTTBCCCCEEEECSSCEEEECBCCCSEEHHHHTTSS--CCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTT
T ss_pred             CCCCCEeEEEEEEecCCceEEEeecccCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhh
Confidence            57999999999999877666666666655555444332  22388899999999999999999999   99999999999


Q ss_pred             ---------cCCCcccccCCCCccc---ccccccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAAR---LHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~---~~~~~~~~~~~~~aP  111 (111)
                               ++|||.+.........   .......|+..|+||
T Consensus       161 Il~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aP  203 (319)
T 2y4i_B          161 VFYDNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAP  203 (319)
T ss_dssp             EEEC--CCEECCCSCCC----------CCSCBCCSGGGGTSCH
T ss_pred             EEEeCCCEEEeecCCccccccccccccccccccCCCcccccCh
Confidence                     4899987654321111   112234578888887

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.68  E-value=2.6e-17  Score=98.97  Aligned_cols=98  Identities=30%  Similarity=0.370  Sum_probs=71.7

Q ss_pred             CCCccceeeeeeeeeCCcc------chhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeec
Q 047898            1 LKHENLVELLGYCVEGNLR------DELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQR   74 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~   74 (111)
                      ++||||+++++++...+..      .++.+++ .+.+...+..    ..++...+..++.|++.|+.|+|+.   +++|+
T Consensus        81 l~hpnIv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~  152 (367)
T 1cm8_A           81 MRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHR  152 (367)
T ss_dssp             CCBTTBCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECC
T ss_pred             CCCcCCCCceeeEecCCccccCceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---Ccccc
Confidence            5899999999999865422      2233333 2222222221    2388899999999999999999999   99999


Q ss_pred             CCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           75 DIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        75 ~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |++|+|          ++|||+++.....     .....+|.+|+||
T Consensus       153 Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aP  194 (367)
T 1cm8_A          153 DLKPGNLAVNEDCELKILDFGLARQADSE-----MTGYVVTRWYRAP  194 (367)
T ss_dssp             CCCGGGEEECTTCCEEECCCTTCEECCSS-----CCSSCSCGGGCCT
T ss_pred             CcCHHHEEEcCCCCEEEEeeecccccccc-----cCcCcCCCCcCCH
Confidence            999999          4899998765432     2345788999998

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.68  E-value=2.5e-17  Score=96.52  Aligned_cols=106  Identities=19%  Similarity=0.317  Sum_probs=73.3

Q ss_pred             CCCccceeeeeeeeeCC--ccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 047898            1 LKHENLVELLGYCVEGN--LRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRS   78 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~   78 (111)
                      ++||||+++++++...+  ...++++++..+ +...+... ....+++.++..++.|++.|+.|+|++   +++|+|+++
T Consensus        63 l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp  137 (305)
T 2wtk_C           63 LRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSV-PEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKP  137 (305)
T ss_dssp             CCCTTBCCEEEEEECC---CEEEEEECCSEE-HHHHHHHS-TTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSG
T ss_pred             cCCCCeeEEEEEEEcCCCCeEEEEehhccCC-HHHHHHhC-cccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCc
Confidence            57999999999985432  233444554433 11222111 223488999999999999999999999   999999999


Q ss_pred             CC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           79 SN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        79 ~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +|          +.|||.+................++..|+||
T Consensus       138 ~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  180 (305)
T 2wtk_C          138 GNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPP  180 (305)
T ss_dssp             GGEEECTTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCH
T ss_pred             ccEEEcCCCcEEeeccccccccCccccccccccCCCCCCCcCh
Confidence            99          4899988765432222113345678889887

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.68  E-value=2.1e-17  Score=97.59  Aligned_cols=101  Identities=24%  Similarity=0.320  Sum_probs=74.3

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.... ..++++++..+.+...+..   ...++..++..++.|++.|+.|+|++   +++|+|++++|
T Consensus        72 l~h~~i~~~~~~~~~~~-~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~N  144 (322)
T 2ycf_A           72 LNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVG---NKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPEN  144 (322)
T ss_dssp             CCCTTBCCEEEEEESSS-EEEEEECCTTEETHHHHST---TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred             CCCCCCceEeeEEcCCc-eEEEEecCCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHH
Confidence            57999999999997654 4445555555444433332   23488999999999999999999999   99999999999


Q ss_pred             c-------------CCCcccccCCCCcccccccccCccccccCC
Q 047898           81 I-------------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 i-------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |             +|||.+........   .....++..|+||
T Consensus       145 Il~~~~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~gt~~y~aP  185 (322)
T 2ycf_A          145 VLLSSQEEDCLIKITDFGHSKILGETSL---MRTLCGTPTYLAP  185 (322)
T ss_dssp             EEESSSSSSCCEEECCCTTCEECCCCHH---HHHHHSCCTTCCH
T ss_pred             EEEecCCCCCeEEEccCccceecccccc---cccccCCcCccCc
Confidence            3             68888776543321   2234578888887

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.68  E-value=5.4e-17  Score=95.11  Aligned_cols=102  Identities=23%  Similarity=0.322  Sum_probs=78.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.......++++++..+.+...+..    ..++..++..++.|++.|+.++|+.   +++|+|++++|
T Consensus        77 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~N  149 (303)
T 3a7i_A           77 CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP----GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAAN  149 (303)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred             CCCCCEeEEEEEEecCCeEEEEEEeCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhe
Confidence            5799999999999987766666676665555444321    2388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                +.|||.+.........  .....++..|+||
T Consensus       150 il~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aP  188 (303)
T 3a7i_A          150 VLLSEHGEVKLADFGVAGQLTDTQIK--RNTFVGTPFWMAP  188 (303)
T ss_dssp             EEECTTSCEEECCCTTCEECBTTBCC--BCCCCSCGGGCCH
T ss_pred             EEECCCCCEEEeecccceecCccccc--cCccCCCcCccCH
Confidence                      4899988765433221  2345678889887

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.68  E-value=2.1e-17  Score=105.60  Aligned_cols=104  Identities=21%  Similarity=0.270  Sum_probs=73.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.++ ...++++++..+++...+...  ...+++..+..++.|++.|+.|+|++   +++|+|++|+|
T Consensus       448 l~HpnIv~l~~~~~~~-~~~lv~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~N  521 (656)
T 2j0j_A          448 FDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARN  521 (656)
T ss_dssp             CCCTTBCCEEEEECSS-SCEEEEECCTTCBHHHHHHHT--TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGG
T ss_pred             CCCCCCCeEEEEEecC-ceEEEEEcCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHh
Confidence            5799999999998643 345556666655555444322  22388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++........ ......+++.|+||
T Consensus       522 ILl~~~~~vkL~DFG~a~~~~~~~~~-~~~~~~~t~~y~aP  561 (656)
T 2j0j_A          522 VLVSSNDCVKLGDFGLSRYMEDSTYY-KASKGKLPIKWMAP  561 (656)
T ss_dssp             EEEEETTEEEECCCCCCCSCCC-----------CCGGGCCH
T ss_pred             EEEeCCCCEEEEecCCCeecCCCcce-eccCCCCCcceeCH
Confidence                      4899999876443221 12234567789987

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.68  E-value=5.3e-17  Score=94.47  Aligned_cols=99  Identities=30%  Similarity=0.570  Sum_probs=73.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC--eeecCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPS--IIQRDIRS   78 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~--i~h~~l~~   78 (111)
                      ++||||+++++++.+..  .++++++..+++...+...  ...+++..+..++.|++.|+.|+|+.   +  ++|+|++|
T Consensus        80 l~h~~i~~~~~~~~~~~--~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp  152 (287)
T 4f0f_A           80 LNHPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDK--AHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRS  152 (287)
T ss_dssp             CCCTTBCCEEEEETTTT--EEEEECCTTCBHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSG
T ss_pred             CCCCCchhhheeecCCC--eEEEEecCCCCHHHHHhcc--cCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCc
Confidence            57999999999987644  3455555555443333322  23489999999999999999999999   8  99999999


Q ss_pred             CCc---------------CCCcccccCCCCcccccccccCccccccCC
Q 047898           79 SNI---------------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        79 ~ni---------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +||               +|||.++.....     .....+|+.|+||
T Consensus       153 ~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~g~~~y~aP  195 (287)
T 4f0f_A          153 PNIFLQSLDENAPVCAKVADFGLSQQSVHS-----VSGLLGNFQWMAP  195 (287)
T ss_dssp             GGEEESCCCTTCSCCEEECCCTTCBCCSSC-----EECCCCCCTTSCG
T ss_pred             ceEEEeccCCCCceeEEeCCCCcccccccc-----ccccCCCccccCc
Confidence            993               688877643322     2345688889887

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.68  E-value=4e-18  Score=101.25  Aligned_cols=59  Identities=17%  Similarity=0.111  Sum_probs=48.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhh-hcCCCCeeecCCCCCCc------------------------------CCCcccccCC
Q 047898           43 VLDWMTRVRIVVDALRGLEYLH-EKVQPSIIQRDIRSSNI------------------------------ADFNLSNQAP   91 (111)
Q Consensus        43 ~l~~~~~~~~~~~i~~~l~~lh-~~~~~~i~h~~l~~~ni------------------------------~~~g~~~~~~   91 (111)
                      .+++.++..++.|++.|+.|+| ++   +++||||||+||                              +|||+++...
T Consensus       157 ~~~~~~~~~i~~qi~~aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~  233 (336)
T 2vuw_A          157 LSSLATAKSILHQLTASLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLER  233 (336)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecC
Confidence            3789999999999999999999 89   999999999983                              4677766432


Q ss_pred             CCcccccccccCccccccCC
Q 047898           92 NMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~aP  111 (111)
                      .       ....||+.||||
T Consensus       234 ~-------~~~~gt~~y~aP  246 (336)
T 2vuw_A          234 D-------GIVVFCDVSMDE  246 (336)
T ss_dssp             T-------TEEECCCCTTCS
T ss_pred             C-------CcEEEeecccCh
Confidence            2       223688999998

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.68  E-value=1.6e-17  Score=97.04  Aligned_cols=104  Identities=25%  Similarity=0.326  Sum_probs=75.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+...++++++. +.+...+... ....++...+..++.|++.|+.|+|+.   +++|+|++++|
T Consensus        59 l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~N  133 (299)
T 2r3i_A           59 LNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQN  133 (299)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGG
T ss_pred             cCCCCeeeEEEEEecCCceEEEEEccc-CCHHHHHHhh-hccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHH
Confidence            579999999999998776656656554 2333322221 223378899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+.........  .....++..|+||
T Consensus       134 ili~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aP  172 (299)
T 2r3i_A          134 LLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAP  172 (299)
T ss_dssp             EEECTTSCEEECSTTHHHHHCCCSBC--TTSCBCCCTTCCH
T ss_pred             eEEcCCCCEEECcchhhhhccCCccc--cCcccccccccCc
Confidence                      4889987654332211  2234577888887

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.68  E-value=2.2e-17  Score=95.11  Aligned_cols=105  Identities=22%  Similarity=0.321  Sum_probs=77.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+....+++++..+++...+...  ...++..++..++.|++.|+.++|+.   +++|+|++|+|
T Consensus        60 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~N  134 (267)
T 3t9t_A           60 LSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARN  134 (267)
T ss_dssp             CCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGG
T ss_pred             CCCCCEeeEEEEEccCCCeEEEEeCCCCCcHHHHHhhC--cccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchhe
Confidence            57999999999998877666666666655554444322  22378999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+......... ......++..|+||
T Consensus       135 ili~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~y~aP  174 (267)
T 3t9t_A          135 CLVGENQVIKVSDFGMTRFVLDDQYT-SSTGTKFPVKWASP  174 (267)
T ss_dssp             EEECGGGCEEECCTTGGGGBCCHHHH-STTSTTCCGGGCCH
T ss_pred             EEECCCCCEEEccccccccccccccc-ccccccccccccCh
Confidence                      4899988765432211 12233456778887

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.68  E-value=1.6e-17  Score=101.72  Aligned_cols=104  Identities=21%  Similarity=0.271  Sum_probs=69.4

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +|||||++++++.+.....++.+++. +.+...+....  ..........++.|++.|+.|+|+.   +++|+|++|+| 
T Consensus        76 ~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NI  149 (432)
T 3p23_A           76 EHPNVIRYFCTEKDRQFQYIAIELCA-ATLQEYVEQKD--FAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNI  149 (432)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHSSS--CCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSE
T ss_pred             CCCCcCeEEEEEecCCEEEEEEECCC-CCHHHHHHhcC--CCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHE
Confidence            79999999999998776555555554 23333322211  1133345678899999999999999   99999999999 


Q ss_pred             --------------cCCCcccccCCCCccc-ccccccCccccccCC
Q 047898           81 --------------IADFNLSNQAPNMAAR-LHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 --------------i~~~g~~~~~~~~~~~-~~~~~~~~~~~~~aP  111 (111)
                                    ++|||+++........ .......||+.|+||
T Consensus       150 ll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~AP  195 (432)
T 3p23_A          150 LISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAP  195 (432)
T ss_dssp             EECCCBTTTBCCEEECCTTEEECC------------CCSCTTSCCG
T ss_pred             EEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccCh
Confidence                          3689988766433211 113346789999998

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.68  E-value=4.3e-17  Score=97.52  Aligned_cols=75  Identities=15%  Similarity=0.142  Sum_probs=57.8

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCc
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI   81 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~ni   81 (111)
                      +||||+++++++...+...++++++ .+.+...+... ....++..++..++.|++.|+.|+|++   +++|+|+||+||
T Consensus        94 ~h~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NI  168 (360)
T 3llt_A           94 NNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRN-NYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENI  168 (360)
T ss_dssp             TGGGBCCEEEEEEETTEEEEEECCC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGE
T ss_pred             CCCCeecccceeeECCeeEEEEcCC-CCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccE
Confidence            5999999999999877655555555 33333333222 222388999999999999999999999   999999999983

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.68  E-value=1.8e-17  Score=96.20  Aligned_cols=102  Identities=20%  Similarity=0.272  Sum_probs=73.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++........+++++..+.+...+..   ...+++.++..++.|++.|+.++|+.   +++|+|++|+|
T Consensus        65 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~N  138 (283)
T 3bhy_A           65 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAE---KESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPEN  138 (283)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred             CCCCCeeehhheecCCCeEEEEEeecCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHH
Confidence            5799999999999987766666666655544443322   22388999999999999999999999   99999999999


Q ss_pred             c--------------CCCcccccCCCCcccccccccCccccccCC
Q 047898           81 I--------------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 i--------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |              +|||.+........   .....++..|+||
T Consensus       139 il~~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aP  180 (283)
T 3bhy_A          139 IMLLDKNVPNPRIKLIDFGIAHKIEAGNE---FKNIFGTPEFVAP  180 (283)
T ss_dssp             EEESCSSSSSCCEEECCCTTCEECC-----------CCCGGGCCH
T ss_pred             EEEecCCCCCCceEEEecccceeccCCCc---ccccCCCcCccCc
Confidence            3              67887765433221   2334578888887

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.68  E-value=2.8e-17  Score=94.73  Aligned_cols=100  Identities=18%  Similarity=0.257  Sum_probs=72.5

Q ss_pred             CCCccceeeeeeeeeC--CccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC--eeecCC
Q 047898            1 LKHENLVELLGYCVEG--NLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPS--IIQRDI   76 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~--i~h~~l   76 (111)
                      ++||||+++++++...  ....++.+++..+++...+.... ...+++.++..++.|++.|+.|+|+.   +  ++|+|+
T Consensus        64 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~di  139 (271)
T 3kmu_A           64 FSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGT-NFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHAL  139 (271)
T ss_dssp             CSCTTEECEEEEECTTTSSSCEEEEECCTTCBHHHHHHSCS-SCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCC
T ss_pred             cCCCchhheEEEEccCCCCCeEeeecccCCCcHHHHHhhcc-cCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCC
Confidence            5799999999999876  33445666666666655554322 22489999999999999999999998   7  999999


Q ss_pred             CCCCc----------CCCcccccCCCCcccccccccCccccccCC
Q 047898           77 RSSNI----------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        77 ~~~ni----------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +|+||          .+++++....       .....+|+.|+||
T Consensus       140 kp~Nil~~~~~~~~l~~~~~~~~~~-------~~~~~~t~~y~aP  177 (271)
T 3kmu_A          140 NSRSVMIDEDMTARISMADVKFSFQ-------SPGRMYAPAWVAP  177 (271)
T ss_dssp             SGGGEEECTTSCEEEEGGGSCCTTS-------CTTCBSCGGGSCH
T ss_pred             ccceEEEcCCcceeEEeccceeeec-------ccCccCCccccCh
Confidence            99994          3333332211       1234578889887

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.67  E-value=5.4e-18  Score=100.81  Aligned_cols=108  Identities=23%  Similarity=0.248  Sum_probs=73.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCC-----------------------------------C--CCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGA-----------------------------------Q--PSPV   43 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------~--~~~~   43 (111)
                      ++||||+++++++.+.+...++++++..+++...+...                                   .  ....
T Consensus        85 l~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (345)
T 3hko_A           85 LHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFV  164 (345)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHH
T ss_pred             CCCCCcceeehhhccCCeEEEEEeCCCCCcHHHHHHHhhccccccccccccccccccccccccccccccccccccccccc
Confidence            57999999999999877666676776655443332100                                   0  0111


Q ss_pred             CCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC------------cCCCcccccCCCCccc--ccccccCcccccc
Q 047898           44 LDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN------------IADFNLSNQAPNMAAR--LHSTRVLGTFSYH  109 (111)
Q Consensus        44 l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n------------i~~~g~~~~~~~~~~~--~~~~~~~~~~~~~  109 (111)
                      ++...+..++.|++.|+.|||+.   +++|+|++|+|            ++|||.++........  .......+|+.|+
T Consensus       165 ~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~  241 (345)
T 3hko_A          165 QREKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFV  241 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGC
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCcccc
Confidence            35666778999999999999999   99999999999            3789988754332111  1123456888999


Q ss_pred             CC
Q 047898          110 AP  111 (111)
Q Consensus       110 aP  111 (111)
                      ||
T Consensus       242 aP  243 (345)
T 3hko_A          242 AP  243 (345)
T ss_dssp             CH
T ss_pred             Cc
Confidence            87

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.67  E-value=1.7e-17  Score=97.59  Aligned_cols=104  Identities=24%  Similarity=0.396  Sum_probs=69.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.+.  ..++++++..+++...+........++...+..++.|++.|+.|+|+....+++|+|++++|
T Consensus        58 l~hp~iv~~~~~~~~~--~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~N  135 (307)
T 2eva_A           58 VNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPN  135 (307)
T ss_dssp             CCCTTBCCEEEBCTTT--TEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGG
T ss_pred             CCCCCcCeEEEEEcCC--cEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhH
Confidence            5799999999998742  34555666655555554433333347888899999999999999999211189999999999


Q ss_pred             -----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 -----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 -----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                 ++|||.+......     .....||..|+||
T Consensus       136 Ill~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aP  172 (307)
T 2eva_A          136 LLLVAGGTVLKICDFGTACDIQTH-----MTNNKGSAAWMAP  172 (307)
T ss_dssp             EEEETTTTEEEECCCCC-----------------CCTTSSCH
T ss_pred             EEEeCCCCEEEEcccccccccccc-----cccCCCCCceECh
Confidence                       3788887654322     1234578889887

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.67  E-value=1.4e-17  Score=96.60  Aligned_cols=77  Identities=18%  Similarity=0.198  Sum_probs=61.3

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCC-CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQ-PSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      +||||+++++++...+...++.+++..+++...+.... ....+++.++..++.|++.|+.|+|++   +++|+|++|+|
T Consensus        69 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~N  145 (289)
T 1x8b_A           69 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSN  145 (289)
T ss_dssp             SCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred             CCCCeeeeeeeeecCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHH
Confidence            79999999999998776666667766655544443211 113388999999999999999999999   99999999999


Q ss_pred             c
Q 047898           81 I   81 (111)
Q Consensus        81 i   81 (111)
                      |
T Consensus       146 I  146 (289)
T 1x8b_A          146 I  146 (289)
T ss_dssp             E
T ss_pred             E
Confidence            3

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.67  E-value=2.1e-17  Score=95.91  Aligned_cols=104  Identities=27%  Similarity=0.360  Sum_probs=73.3

Q ss_pred             CCCccceeeeeeeeeC----------------CccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 047898            1 LKHENLVELLGYCVEG----------------NLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLH   64 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh   64 (111)
                      ++||||+++++++...                ....++.+++..+++...+... ....+++..+..++.|++.|+.|+|
T Consensus        61 l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH  139 (284)
T 2a19_B           61 LDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR-RGEKLDKVLALELFEQITKGVDYIH  139 (284)
T ss_dssp             CCCTTBCCEEEEEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHG-GGSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeeeEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            5899999999988641                1122333444444444333221 1234889999999999999999999


Q ss_pred             hcCCCCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           65 EKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        65 ~~~~~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +.   +++|+|++|+|          ++|||.+........   .....+++.|+||
T Consensus       140 ~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aP  190 (284)
T 2a19_B          140 SK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK---RTRSKGTLRYMSP  190 (284)
T ss_dssp             HT---TEECSCCSGGGEEEEETTEEEECCCTTCEESSCCSC---CCCCCSCCTTSCH
T ss_pred             hC---CeeeccCCHHHEEEcCCCCEEECcchhheecccccc---ccccCCcccccCh
Confidence            99   99999999999          489998876544322   2334678889887

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.67  E-value=3.1e-17  Score=97.53  Aligned_cols=103  Identities=17%  Similarity=0.177  Sum_probs=65.0

Q ss_pred             CCCccceeeeeeeeeCC----ccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCC
Q 047898            1 LKHENLVELLGYCVEGN----LRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDI   76 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l   76 (111)
                      ++||||+++++++....    ...++.+++..+++...+.... ...+++.++..++.|++.|+.|+|++   +++|+|+
T Consensus        79 ~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dl  154 (336)
T 3fhr_A           79 SGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERG-DQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDV  154 (336)
T ss_dssp             TTSTTBCCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             cCCCChHHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence            47999999999997622    1334556665555555544322 23489999999999999999999999   9999999


Q ss_pred             CCCC-------------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           77 RSSN-------------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        77 ~~~n-------------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +++|             ++|||.+.......    .....+|+.|+||
T Consensus       155 kp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~~~t~~y~aP  198 (336)
T 3fhr_A          155 KPENLLYTSKEKDAVLKLTDFGFAKETTQNA----LQTPCYTPYYVAP  198 (336)
T ss_dssp             SGGGEEESCSSTTCCEEECCCTTCEEC---------------------
T ss_pred             CHHHEEEEecCCCceEEEeccccceeccccc----cccCCCCcCccCh
Confidence            9999             36888876543222    2345678889987

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.67  E-value=4.5e-17  Score=94.04  Aligned_cols=100  Identities=28%  Similarity=0.442  Sum_probs=69.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC---eeecCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPS---IIQRDIR   77 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~---i~h~~l~   77 (111)
                      ++||||+++++++...+....+.+++..+.+...+.    ...+++..+..++.|++.|+.|+|+.   +   ++|+|++
T Consensus        63 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~----~~~~~~~~~~~i~~~l~~~l~~lH~~---~~~~i~H~dik  135 (271)
T 3dtc_A           63 LKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLS----GKRIPPDILVNWAVQIARGMNYLHDE---AIVPIIHRDLK  135 (271)
T ss_dssp             CCCTTBCCEEEEECCC--CEEEEECCTTEEHHHHHT----SSCCCHHHHHHHHHHHHHHHHHHHHS---SSSCCCCSCCS
T ss_pred             cCCCCEeeEEEEEecCCceEEEEEcCCCCCHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CCCceeecCCc
Confidence            579999999999998776666667766555544432    22388999999999999999999999   7   8999999


Q ss_pred             CCCc------------------CCCcccccCCCCcccccccccCccccccCC
Q 047898           78 SSNI------------------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        78 ~~ni------------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |+||                  +|||.+.......    .....+++.|+||
T Consensus       136 p~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~~~~~~y~aP  183 (271)
T 3dtc_A          136 SSNILILQKVENGDLSNKILKITDFGLAREWHRTT----KMSAAGAYAWMAP  183 (271)
T ss_dssp             GGGEEESSCCSSSCCSSCCEEECCCCC-----------------CCGGGSCH
T ss_pred             hHHEEEecccccccccCcceEEccCCccccccccc----ccCCCCccceeCH
Confidence            9993                  5777776543322    2234678889887

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.67  E-value=2.3e-17  Score=97.06  Aligned_cols=104  Identities=18%  Similarity=0.238  Sum_probs=71.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+...++.+++..+.+...+..   ...+++.++..++.|++.|+.|+|+.   +++|+|++++|
T Consensus        91 l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~N  164 (309)
T 2h34_A           91 LQEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRR---QGPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPEN  164 (309)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEEECCCCEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGG
T ss_pred             cCCCCeeEEEEEEeeCCeEEEEEEecCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHH
Confidence            5799999999999987766666666655444444332   12388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+......... ......++..|+||
T Consensus       165 Il~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aP  204 (309)
T 2h34_A          165 ILVSADDFAYLVDFGIASATTDEKLT-QLGNTVGTLYYMAP  204 (309)
T ss_dssp             EEECTTSCEEECSCCC-----------------CCGGGCCG
T ss_pred             EEEcCCCCEEEecCccCccccccccc-cccccCCCcCccCH
Confidence                      4899987655432211 12334678888887

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.67  E-value=1e-16  Score=94.62  Aligned_cols=104  Identities=19%  Similarity=0.320  Sum_probs=75.2

Q ss_pred             CCCccceeeeeeeeeCCc--cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 047898            1 LKHENLVELLGYCVEGNL--RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRS   78 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~   78 (111)
                      ++||||+++++++...+.  ..++++++..+++...+..    ..+++.++..++.|++.|+.++|+.   +++|+|+++
T Consensus        90 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp  162 (318)
T 3lxp_A           90 LYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPR----HSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAA  162 (318)
T ss_dssp             CCCTTBCCEEEEEEETTTTEEEEEECCCTTCBHHHHGGG----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSG
T ss_pred             CCCcchhhEEEEEecCCCceEEEEEecccCCcHHHHHhh----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCch
Confidence            579999999999987532  2345555555555444422    2288999999999999999999999   999999999


Q ss_pred             CC----------cCCCcccccCCCCcccc-cccccCccccccCC
Q 047898           79 SN----------IADFNLSNQAPNMAARL-HSTRVLGTFSYHAP  111 (111)
Q Consensus        79 ~n----------i~~~g~~~~~~~~~~~~-~~~~~~~~~~~~aP  111 (111)
                      +|          ++|||.+.......... ......++..|+||
T Consensus       163 ~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aP  206 (318)
T 3lxp_A          163 RNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAP  206 (318)
T ss_dssp             GGEEECTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCH
T ss_pred             heEEEcCCCCEEECCccccccccccccccccccCCCCCceeeCh
Confidence            99          48999987665433211 12334577788887

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.67  E-value=1.8e-17  Score=96.45  Aligned_cols=105  Identities=23%  Similarity=0.248  Sum_probs=68.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCC-CCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQG-AQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~   79 (111)
                      ++||||+++++++...+...++++++.. .+...+.. ......+++..+..++.|++.|+.|+|++.  +++|+|++|+
T Consensus        63 ~~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~  139 (290)
T 3fme_A           63 VDCPFTVTFYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPS  139 (290)
T ss_dssp             CCCTTBCCEEEEEECSSSEEEEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGG
T ss_pred             CCCCeEEEEeeeeeccCCEEEEEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHH
Confidence            4799999999999987766666666542 22222211 112234899999999999999999999842  8999999999


Q ss_pred             C----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           80 N----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |          ++|||.+........   .....+|+.|+||
T Consensus       140 Nil~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aP  178 (290)
T 3fme_A          140 NVLINALGQVKMCDFGISGYLVDDVA---KDIDAGCKPYMAP  178 (290)
T ss_dssp             GCEECTTCCEEBCCC------------------CCCCCCSCH
T ss_pred             HEEECCCCCEEEeecCCccccccccc---ccccCCCccccCh
Confidence            9          489998876543322   2334678889887

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.67  E-value=2.5e-17  Score=95.33  Aligned_cols=102  Identities=21%  Similarity=0.266  Sum_probs=70.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+...++.+++..+++...+...   ..++..++..++.|++.|+.++|+.   +++|+|++++|
T Consensus        68 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~N  141 (276)
T 2h6d_A           68 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKH---GRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPEN  141 (276)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGG
T ss_pred             CCCCCEeEEEEEEecCCeEEEEEeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhh
Confidence            57999999999999877666666666544444333221   2378899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+........   .....+++.|+||
T Consensus       142 il~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~y~aP  179 (276)
T 2h6d_A          142 VLLDAHMNAKIADFGLSNMMSDGEF---LRTSCGSPNYAAP  179 (276)
T ss_dssp             EEECTTSCEEECCCCGGGCCCC----------------CCT
T ss_pred             EEECCCCCEEEeecccccccCCCcc---eecccCCccccCH
Confidence                      489998876543321   2334678888887

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.67  E-value=3.3e-17  Score=96.11  Aligned_cols=101  Identities=26%  Similarity=0.348  Sum_probs=75.1

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+....+.+++..+++...+..   ...++..++..++.|++.|+.|+|+.   +++|+|++++|
T Consensus        63 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~N  136 (304)
T 2jam_A           63 IKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILE---RGVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPEN  136 (304)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGG
T ss_pred             CCCCCeeehhhhcccCCEEEEEEEcCCCccHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHH
Confidence            5899999999999987766666666654444333322   12378899999999999999999999   99999999999


Q ss_pred             c-------------CCCcccccCCCCcccccccccCccccccCC
Q 047898           81 I-------------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 i-------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |             +|||.+.......    .....++..|+||
T Consensus       137 Il~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~~~~~~y~aP  176 (304)
T 2jam_A          137 LLYLTPEENSKIMITDFGLSKMEQNGI----MSTACGTPGYVAP  176 (304)
T ss_dssp             CEESSSSTTCCEEBCSCSTTCCCCCBT----THHHHSCCCBCCT
T ss_pred             EEEecCCCCCCEEEccCCcceecCCCc----cccccCCCCccCh
Confidence            3             6788776443221    2234578889988

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.66  E-value=4e-18  Score=99.73  Aligned_cols=104  Identities=24%  Similarity=0.272  Sum_probs=72.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+...++.+++..+.+...+...  ...++..++..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        73 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~N  147 (302)
T 2j7t_A           73 CDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLEL--DRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGN  147 (302)
T ss_dssp             CCCTTBCCEEEEEECC-CEEEEEECCTTEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGG
T ss_pred             CCCCCEeeeeeeeeeCCeEEEEEEeCCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHH
Confidence            57999999999999877666666666655444333221  22388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+.........  .....++..|+||
T Consensus       148 il~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aP  186 (302)
T 2j7t_A          148 VLMTLEGDIRLADFGVSAKNLKTLQK--RDSFIGTPYWMAP  186 (302)
T ss_dssp             EEECTTSCEEECCCHHHHHHHHHHHC-------CCGGGCCH
T ss_pred             EEECCCCCEEEEECCCCccccccccc--cccccCChhhcCC
Confidence                      3788876432111111  2234678888887

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.66  E-value=4.3e-17  Score=96.27  Aligned_cols=103  Identities=27%  Similarity=0.428  Sum_probs=72.0

Q ss_pred             CCCccceeeeeeeee-----CCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecC
Q 047898            1 LKHENLVELLGYCVE-----GNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRD   75 (111)
Q Consensus         1 l~h~~iv~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~   75 (111)
                      ++||||+++++++..     .....++++++. +.+...+... ....++..++..++.|++.|+.|+|+.   +++|+|
T Consensus        71 ~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~d  145 (326)
T 1blx_A           71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKV-PEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRD  145 (326)
T ss_dssp             TCCTTBCCEEEEEEEEECSSEEEEEEEEECCS-CBHHHHHHHS-CTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCC
T ss_pred             cCCCCeEeeeeeeeecccCCCceEEEEEecCC-CCHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHHC---Cceecc
Confidence            379999999999872     222223334433 2333322221 223388999999999999999999999   999999


Q ss_pred             CCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           76 IRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        76 l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      ++++|          ++|||.++.......   .....++..|+||
T Consensus       146 lkp~Nili~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aP  188 (326)
T 1blx_A          146 LKPQNILVTSSGQIKLADFGLARIYSFQMA---LTSVVVTLWYRAP  188 (326)
T ss_dssp             CCGGGEEECTTCCEEECSCCSCCCCCGGGG---GCCCCCCCTTCCH
T ss_pred             CCHHHeEEcCCCCEEEecCcccccccCCCC---ccccccccceeCH
Confidence            99999          489998876543221   2345678889887

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.66  E-value=6.7e-17  Score=94.28  Aligned_cols=104  Identities=21%  Similarity=0.301  Sum_probs=73.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.. +....+.+++..+++...+..   ...++..++..++.|++.|+.|+|+.   +++|+|++++|
T Consensus        75 l~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~N  147 (291)
T 1xbb_A           75 LDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARN  147 (291)
T ss_dssp             CCCTTBCCEEEEEES-SSEEEEEECCTTEEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred             CCCCCEEEEEEEECC-CCcEEEEEeCCCCCHHHHHHh---CcCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcce
Confidence            579999999999943 334455566655555444432   22388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCccccc-ccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLH-STRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~-~~~~~~~~~~~aP  111 (111)
                                ++|||.+........... .....++..|+||
T Consensus       148 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aP  189 (291)
T 1xbb_A          148 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP  189 (291)
T ss_dssp             EEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCH
T ss_pred             EEEeCCCcEEEccCCcceeeccCCCcccccccCCCCceeeCh
Confidence                      489999876654332211 1223456778887

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.66  E-value=2.7e-17  Score=96.15  Aligned_cols=108  Identities=28%  Similarity=0.321  Sum_probs=74.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCC-----CCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQG-----AQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRD   75 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~   75 (111)
                      ++||||+++++++...+...++.+++..+.+...+..     ......+++.++..++.|++.|+.|+|+.   +++|+|
T Consensus        70 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~d  146 (303)
T 2vwi_A           70 CHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRD  146 (303)
T ss_dssp             CCCTTBCCEEEEEESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCC
T ss_pred             cCCCCEeeEEEEEeecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCC
Confidence            5799999999999987766666666655544333321     11233488999999999999999999999   999999


Q ss_pred             CCCCC----------cCCCcccccCCCCccc---ccccccCccccccCC
Q 047898           76 IRSSN----------IADFNLSNQAPNMAAR---LHSTRVLGTFSYHAP  111 (111)
Q Consensus        76 l~~~n----------i~~~g~~~~~~~~~~~---~~~~~~~~~~~~~aP  111 (111)
                      ++++|          ++|||.+.........   .......+++.|+||
T Consensus       147 l~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aP  195 (303)
T 2vwi_A          147 VKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAP  195 (303)
T ss_dssp             CSGGGEEECTTCCEEECCCHHHHHCC---------------CCCTTCCH
T ss_pred             CChhhEEEcCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCH
Confidence            99999          4789987655432111   012335678889887

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.66  E-value=5.9e-17  Score=94.64  Aligned_cols=101  Identities=23%  Similarity=0.229  Sum_probs=77.5

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +||||+++++++.......++++++..+.+...+..   ...++..++..++.|++.|+.++|+.   +++|+|++++| 
T Consensus        82 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Ni  155 (298)
T 1phk_A           82 GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE---KVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENI  155 (298)
T ss_dssp             TCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGE
T ss_pred             CCCCEeeeeeeeccCCeEEEEEeccCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceE
Confidence            499999999999887766666677665555444332   22388999999999999999999999   99999999999 


Q ss_pred             ---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                               +.|||.+........   .....++..|+||
T Consensus       156 l~~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aP  192 (298)
T 1phk_A          156 LLDDDMNIKLTDFGFSCQLDPGEK---LREVCGTPSYLAP  192 (298)
T ss_dssp             EECTTCCEEECCCTTCEECCTTCC---BCCCCSCGGGCCH
T ss_pred             EEcCCCcEEEecccchhhcCCCcc---cccccCCccccCH
Confidence                     489998876543322   2345678888887

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.66  E-value=8.3e-17  Score=98.49  Aligned_cols=100  Identities=17%  Similarity=0.174  Sum_probs=74.1

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +|+||+++++++.......++++++. +.+...+... ....+++..+..++.|++.|+.|||+.   +++|+|+||+| 
T Consensus       157 ~~~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NI  231 (429)
T 3kvw_A          157 NTMNVIHMLENFTFRNHICMTFELLS-MNLYELIKKN-KFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENI  231 (429)
T ss_dssp             SCSCBCCEEEEEEETTEEEEEECCCC-CBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGE
T ss_pred             CCcCEEEEEeecccCCeEEEEEeccC-CCHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHe
Confidence            68899999999998766555555554 2222222221 222388999999999999999999999   99999999999 


Q ss_pred             -----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 -----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 -----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                 ++|||++......     ..+..+|+.|+||
T Consensus       232 Ll~~~~~~~vkL~DFG~a~~~~~~-----~~~~~gt~~y~aP  268 (429)
T 3kvw_A          232 LLKQQGRSGIKVIDFGSSCYEHQR-----VYTYIQSRFYRAP  268 (429)
T ss_dssp             EESSTTSCCEEECCCTTCEETTCC-----CCSSCSCGGGCCH
T ss_pred             EEccCCCcceEEeecccceecCCc-----ccccCCCCCccCh
Confidence                       3789987654322     2345788999997

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.66  E-value=9.4e-17  Score=102.47  Aligned_cols=105  Identities=25%  Similarity=0.259  Sum_probs=77.8

Q ss_pred             CCCccceeeeeeeee------CCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeec
Q 047898            1 LKHENLVELLGYCVE------GNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQR   74 (111)
Q Consensus         1 l~h~~iv~l~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~   74 (111)
                      ++||||+++++++..      .+...++++++..+++...+........+++..+..++.+++.|+.|+|+.   +++|+
T Consensus        69 L~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHr  145 (676)
T 3qa8_A           69 LNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHR  145 (676)
T ss_dssp             CCBTTBCCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCC
T ss_pred             CCCCCCCceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccC
Confidence            589999999999765      333345556665555555544433333488888999999999999999999   99999


Q ss_pred             CCCCCC-------------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           75 DIRSSN-------------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        75 ~l~~~n-------------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |++|+|             ++|||.+........   .....+|..|+||
T Consensus       146 DLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~~---~~~~~gt~~Y~AP  192 (676)
T 3qa8_A          146 DLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL---CTEFVGTLQYLAP  192 (676)
T ss_dssp             CCCSTTEEEECCSSSCEEEECSCCCCCBTTSCCC---CCCCCSCCTTCSS
T ss_pred             CCCHHHeEeecCCCceeEEEcccccccccccccc---cccccCCcccCCh
Confidence            999999             378998876543322   2345788899988

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.66  E-value=7.2e-17  Score=95.64  Aligned_cols=107  Identities=22%  Similarity=0.354  Sum_probs=75.4

Q ss_pred             CCCccceeeeeeeeeCC----ccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcC-----CCCe
Q 047898            1 LKHENLVELLGYCVEGN----LRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKV-----QPSI   71 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~-----~~~i   71 (111)
                      ++||||+++++++....    ...++++++..+++...+..    ..+++.++..++.|++.|+.|+|+..     +.++
T Consensus        88 ~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~i  163 (337)
T 3mdy_A           88 MRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKS----TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAI  163 (337)
T ss_dssp             CCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCE
T ss_pred             hcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCE
Confidence            48999999999998763    33445555555555444421    23889999999999999999999751     2379


Q ss_pred             eecCCCCCC----------cCCCcccccCCCCccccc--ccccCccccccCC
Q 047898           72 IQRDIRSSN----------IADFNLSNQAPNMAARLH--STRVLGTFSYHAP  111 (111)
Q Consensus        72 ~h~~l~~~n----------i~~~g~~~~~~~~~~~~~--~~~~~~~~~~~aP  111 (111)
                      +|+|++|+|          ++|||.+...........  .....||+.|+||
T Consensus       164 vH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aP  215 (337)
T 3mdy_A          164 AHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPP  215 (337)
T ss_dssp             ECSCCCGGGEEECTTSCEEECCCTTCEECC---------CCSSCSCGGGCCH
T ss_pred             EecccchHHEEECCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeCh
Confidence            999999999          489999876554332211  2345789999997

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.65  E-value=4.6e-17  Score=96.37  Aligned_cols=106  Identities=20%  Similarity=0.211  Sum_probs=76.1

Q ss_pred             CCCccceeeeeeeeeCCc--cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 047898            1 LKHENLVELLGYCVEGNL--RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRS   78 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~   78 (111)
                      ++||||+++++++...+.  ..++++++..+++...+....  ..+++.++..++.|++.|+.|+|+.   +++|+|++|
T Consensus        81 l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp  155 (327)
T 3lxl_A           81 LHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR--ARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAA  155 (327)
T ss_dssp             CCCTTBCCEEEEEECSSSCEEEEEEECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSG
T ss_pred             cCCCceeEEEEEEecCCCceEEEEEeecCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCh
Confidence            579999999999874332  334555555555444433211  2388999999999999999999999   999999999


Q ss_pred             CC----------cCCCcccccCCCCcccc-cccccCccccccCC
Q 047898           79 SN----------IADFNLSNQAPNMAARL-HSTRVLGTFSYHAP  111 (111)
Q Consensus        79 ~n----------i~~~g~~~~~~~~~~~~-~~~~~~~~~~~~aP  111 (111)
                      +|          ++|||.+.......... ......++..|+||
T Consensus       156 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aP  199 (327)
T 3lxl_A          156 RNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP  199 (327)
T ss_dssp             GGEEEEETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCH
T ss_pred             hhEEECCCCCEEEcccccceecccCCccceeeccCCccccccCH
Confidence            99          48999988665433221 12334577889887

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.65  E-value=6e-17  Score=94.38  Aligned_cols=101  Identities=25%  Similarity=0.330  Sum_probs=72.3

Q ss_pred             CCCccceeeeeeeeeCCc----cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC--eeec
Q 047898            1 LKHENLVELLGYCVEGNL----RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPS--IIQR   74 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~--i~h~   74 (111)
                      ++||||+++++++.....    ..++.+++..+++...+..   ...++...+..++.|++.|+.|+|+.   +  ++|+
T Consensus        82 l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~  155 (290)
T 1t4h_A           82 LQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHR  155 (290)
T ss_dssp             CCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCS
T ss_pred             CCCCCeeeeeeeeccccCCCceEEEEEEecCCCCHHHHHHH---ccCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEEC
Confidence            579999999999875321    2334444444444433322   13388899999999999999999999   8  9999


Q ss_pred             CCCCCC-----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           75 DIRSSN-----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        75 ~l~~~n-----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |++|+|           ++|||.+.......    .....+++.|+||
T Consensus       156 dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~----~~~~~~t~~y~aP  199 (290)
T 1t4h_A          156 DLKCDNIFITGPTGSVKIGDLGLATLKRASF----AKAVIGTPEFMAP  199 (290)
T ss_dssp             CCCGGGEEESSTTSCEEECCTTGGGGCCTTS----BEESCSSCCCCCG
T ss_pred             CCCHHHEEEECCCCCEEEeeCCCcccccccc----cccccCCcCcCCH
Confidence            999999           37898886443322    2345688889987

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.65  E-value=8.8e-17  Score=96.69  Aligned_cols=99  Identities=30%  Similarity=0.445  Sum_probs=60.6

Q ss_pred             CCCccceeeeeeeeeCCcc---chhhhhhh--hhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecC
Q 047898            1 LKHENLVELLGYCVEGNLR---DELIWIIH--VITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRD   75 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~   75 (111)
                      ++||||+++++++......   ..++.+++  .+++....    ....++...+..++.|++.|+.|+|+.   +++|+|
T Consensus        85 l~hpnIv~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~D  157 (367)
T 2fst_X           85 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRD  157 (367)
T ss_dssp             CCCTTBCCCSEEECSCSSGGGCCCCEEEEECCCEECC---------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCC
T ss_pred             CCCCCCCcEEEEEecCCccccCCeEEEEecccCCCHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCC
Confidence            5899999999999764211   11222222  22222222    223489999999999999999999999   999999


Q ss_pred             CCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           76 IRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        76 l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      ++|+|          ++|||+++.....     .....+|.+|+||
T Consensus       158 lkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aP  198 (367)
T 2fst_X          158 LKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAP  198 (367)
T ss_dssp             CCGGGEEECTTCCEEECC--------------------CCCTTCCH
T ss_pred             CCHhhEEECCCCCEEEeecccccccccc-----CCCcCcCcCccCh
Confidence            99999          4899998764322     2335688899987

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.65  E-value=2.9e-17  Score=96.54  Aligned_cols=106  Identities=19%  Similarity=0.313  Sum_probs=69.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCC-CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGA-QPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~   79 (111)
                      ++||||+++++++...+...++++++..+.+...+... .....++...+..++.|++.|+.|+|+.   +++|+|++++
T Consensus        89 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~  165 (310)
T 2wqm_A           89 LNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPA  165 (310)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGG
T ss_pred             CCCCCEeeEEEEEEcCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHH
Confidence            57999999999999877666666666655444333211 1123378899999999999999999999   9999999999


Q ss_pred             C----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           80 N----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |          +.|||.+.........  .....++..|+||
T Consensus       166 NIl~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aP  205 (310)
T 2wqm_A          166 NVFITATGVVKLGDLGLGRFFSSKTTA--AHSLVGTPYYMSP  205 (310)
T ss_dssp             GEEECTTSCEEECCC--------------------CCSSCCH
T ss_pred             HEEEcCCCCEEEEeccceeeecCCCcc--ccccCCCeeEeCh
Confidence            9          4899988765433221  2334678888887

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.65  E-value=6.1e-17  Score=96.17  Aligned_cols=104  Identities=22%  Similarity=0.272  Sum_probs=76.2

Q ss_pred             CCCccceeeeeeeeeCC----ccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhh--------hcCC
Q 047898            1 LKHENLVELLGYCVEGN----LRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLH--------EKVQ   68 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh--------~~~~   68 (111)
                      ++||||+++++++....    ...++.+++..+++...+..    ..+++.++..++.|++.|+.|+|        +.  
T Consensus        93 l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~--  166 (342)
T 1b6c_B           93 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP--  166 (342)
T ss_dssp             CCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC--
T ss_pred             cCCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHHHhc----cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC--
Confidence            47999999999998765    33445555555555444422    23889999999999999999999        77  


Q ss_pred             CCeeecCCCCCC----------cCCCcccccCCCCcccc--cccccCccccccCC
Q 047898           69 PSIIQRDIRSSN----------IADFNLSNQAPNMAARL--HSTRVLGTFSYHAP  111 (111)
Q Consensus        69 ~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~--~~~~~~~~~~~~aP  111 (111)
                       +++|+|++|+|          ++|||.+..........  ......+|..|+||
T Consensus       167 -~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aP  220 (342)
T 1b6c_B          167 -AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP  220 (342)
T ss_dssp             -EEECSCCSGGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCH
T ss_pred             -CeeeCCCCHHHEEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCH
Confidence             99999999999          48999886554332211  12345688999987

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.65  E-value=4.4e-17  Score=94.57  Aligned_cols=104  Identities=19%  Similarity=0.244  Sum_probs=71.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.+.. ...+++++..+++...+...  ...++...+..++.|++.|+.++|+.   +++|+|++|+|
T Consensus        70 l~h~~i~~~~~~~~~~~-~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~N  143 (281)
T 3cc6_A           70 LDHPHIVKLIGIIEEEP-TWIIMELYPYGELGHYLERN--KNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRN  143 (281)
T ss_dssp             HCCTTBCCEEEEECSSS-CEEEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGG
T ss_pred             CCCCCcceEEEEEcCCC-CEEEEecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccce
Confidence            47999999999987543 34455555544444433221  22378899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+......... ......++..|+||
T Consensus       144 il~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aP  183 (281)
T 3cc6_A          144 ILVASPECVKLGDFGLSRYIEDEDYY-KASVTRLPIKWMSP  183 (281)
T ss_dssp             EEEEETTEEEECCCCGGGCC----------CCCCCGGGCCH
T ss_pred             EEECCCCcEEeCccCCCccccccccc-ccccCCCCcceeCc
Confidence                      4899998765443221 12234567788887

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.65  E-value=5.2e-17  Score=97.24  Aligned_cols=102  Identities=24%  Similarity=0.303  Sum_probs=65.4

Q ss_pred             CCCccceeeeeeeeeCCcc-----chhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecC
Q 047898            1 LKHENLVELLGYCVEGNLR-----DELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRD   75 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~   75 (111)
                      ++||||+++++++...+..     .++.+++. +.+...+..  ....+++.++..++.|++.|+.|+|+.   +++|+|
T Consensus        86 l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~D  159 (362)
T 3pg1_A           86 FHHPNILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD--QRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRD  159 (362)
T ss_dssp             CCCTTBCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHC--TTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCC
T ss_pred             CCCcCccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecC
Confidence            5899999999999754322     23334443 223222222  223488999999999999999999999   999999


Q ss_pred             CCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           76 IRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        76 l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      ++|+|          ++|||.+........   .....+|..|+||
T Consensus       160 lkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aP  202 (362)
T 3pg1_A          160 LHPGNILLADNNDITICDFNLAREDTADAN---KTHYVTHRWYRAP  202 (362)
T ss_dssp             CCGGGEEECTTCCEEECCTTC------------------CGGGCCH
T ss_pred             CChHHEEEcCCCCEEEEecCcccccccccc---cceecccceecCc
Confidence            99999          489998875433322   2345678888887

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.65  E-value=5.1e-17  Score=95.98  Aligned_cols=104  Identities=25%  Similarity=0.346  Sum_probs=69.9

Q ss_pred             CCccceeeeeeeeeCC------ccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecC
Q 047898            2 KHENLVELLGYCVEGN------LRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRD   75 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~   75 (111)
                      +||||+++++++....      ...++.+++..+.+...+.... ...++...+..++.|++.|+.|+|+.   +++|+|
T Consensus        79 ~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~d  154 (326)
T 2x7f_A           79 HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQH---KVIHRD  154 (326)
T ss_dssp             CSTTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCC
T ss_pred             CCCCeeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccC
Confidence            6999999999998742      2334555555544444433221 23388899999999999999999999   999999


Q ss_pred             CCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           76 IRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        76 l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      ++|+|          +.|||.+.........  .....++..|+||
T Consensus       155 lkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aP  198 (326)
T 2x7f_A          155 IKGQNVLLTENAEVKLVDFGVSAQLDRTVGR--RNTFIGTPYWMAP  198 (326)
T ss_dssp             CSGGGEEECTTCCEEECCCTTTC---------------CCGGGCCH
T ss_pred             CcHHHEEEcCCCCEEEeeCcCceecCcCccc--cccccCCccccCh
Confidence            99999          4899988765432221  2345678889887

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.65  E-value=1.5e-17  Score=99.54  Aligned_cols=101  Identities=22%  Similarity=0.317  Sum_probs=75.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHE-KVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~-~~~~~i~h~~l~~~   79 (111)
                      ++||||+++++++...+...++++++..+++...+...   ..++...+..++.+++.|+.|+|+ .   +++|+|++|+
T Consensus        88 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~~i~~~l~~lh~~~---~i~H~dlkp~  161 (360)
T 3eqc_A           88 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA---GRIPEQILGKVSIAVIKGLTYLREKH---KIMHRDVKPS  161 (360)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHHH---CCCCSCCSGG
T ss_pred             CCCCCEEEEeEEEEECCEEEEEEECCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHhC---CEEcCCccHH
Confidence            57999999999999877666676777665554444321   238889999999999999999998 5   7999999999


Q ss_pred             C----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           80 N----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |          ++|||.+.......    .....||..|+||
T Consensus       162 Nil~~~~~~~kl~Dfg~~~~~~~~~----~~~~~gt~~y~aP  199 (360)
T 3eqc_A          162 NILVNSRGEIKLCDFGVSGQLIDSM----ANSFVGTRSYMSP  199 (360)
T ss_dssp             GEEECTTCCEEECCCCCCHHHHHHC--------CCCCTTCCH
T ss_pred             HEEECCCCCEEEEECCCCccccccc----ccCCCCCCCeECH
Confidence            9          48899875432111    2345678889887

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.65  E-value=7.7e-17  Score=97.89  Aligned_cols=107  Identities=22%  Similarity=0.262  Sum_probs=65.4

Q ss_pred             CCCccceeeeeeeeeCC--ccchhhhhhhhhhcccCcC------CCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCee
Q 047898            1 LKHENLVELLGYCVEGN--LRDELIWIIHVITCKKGVQ------GAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSII   72 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~   72 (111)
                      ++||||+++++++....  ...++++++.. .+...+.      .......+++..+..++.|++.|+.|||+.   +++
T Consensus        75 l~hpniv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~iv  150 (405)
T 3rgf_A           75 LKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVL  150 (405)
T ss_dssp             CCCTTBCCCCEEEEETTTTEEEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCC
T ss_pred             cCCCCeeeEeeEEecCCCCeEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEe
Confidence            58999999999996533  22333344331 1111111      111222388999999999999999999999   999


Q ss_pred             ecCCCCCC--------------cCCCcccccCCCCccc-ccccccCccccccCC
Q 047898           73 QRDIRSSN--------------IADFNLSNQAPNMAAR-LHSTRVLGTFSYHAP  111 (111)
Q Consensus        73 h~~l~~~n--------------i~~~g~~~~~~~~~~~-~~~~~~~~~~~~~aP  111 (111)
                      |+||+|+|              ++|||+++........ .......||+.|+||
T Consensus       151 H~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  204 (405)
T 3rgf_A          151 HRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAP  204 (405)
T ss_dssp             CCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------CCCTTCCH
T ss_pred             CCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCc
Confidence            99999999              3789998766443221 112446789999997

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.64  E-value=1.6e-16  Score=94.02  Aligned_cols=106  Identities=23%  Similarity=0.359  Sum_probs=74.9

Q ss_pred             CCCccceeeeeeeeeCC--ccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 047898            1 LKHENLVELLGYCVEGN--LRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRS   78 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~   78 (111)
                      ++||||+++++++...+  ...++.+++..+++...+...  ...+++.++..++.|++.|+.++|+.   +++|+|++|
T Consensus        99 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp  173 (326)
T 2w1i_A           99 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLAT  173 (326)
T ss_dssp             CCCTTBCCEEEEECC----CCEEEECCCTTCBHHHHHHHS--TTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCG
T ss_pred             CCCCCeeeEEEEEEecCCCceEEEEECCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCc
Confidence            57999999999987644  233455555555554444322  12388999999999999999999999   999999999


Q ss_pred             CC----------cCCCcccccCCCCccccc-ccccCccccccCC
Q 047898           79 SN----------IADFNLSNQAPNMAARLH-STRVLGTFSYHAP  111 (111)
Q Consensus        79 ~n----------i~~~g~~~~~~~~~~~~~-~~~~~~~~~~~aP  111 (111)
                      +|          ++|||.+........... .....++..|+||
T Consensus       174 ~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aP  217 (326)
T 2w1i_A          174 RNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAP  217 (326)
T ss_dssp             GGEEEEETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCH
T ss_pred             ceEEEcCCCcEEEecCcchhhccccccccccccCCCCceeEECc
Confidence            99          489999876654432211 2234566778887

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.64  E-value=9.8e-17  Score=96.51  Aligned_cols=99  Identities=27%  Similarity=0.348  Sum_probs=63.3

Q ss_pred             CCCccceeeeeeeeeCCc------cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeec
Q 047898            1 LKHENLVELLGYCVEGNL------RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQR   74 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~   74 (111)
                      ++||||+++++++...+.      ..++.+++.. .+...+.     ..++..++..++.|++.|+.|+|++   +++|+
T Consensus        81 l~hpniv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~  151 (371)
T 2xrw_A           81 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA---GIIHR  151 (371)
T ss_dssp             CCCTTBCCEEEEECSCCSTTTCCEEEEEEECCSE-EHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred             cCCCCccceEEeeccccccccccceEEEEEcCCC-CHHHHHh-----hccCHHHHHHHHHHHHHHHHHHHHC---Ceecc
Confidence            589999999999986542      2333344432 2222221     1278899999999999999999999   99999


Q ss_pred             CCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           75 DIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        75 ~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |++|+|          ++|||+++.......   .....+|..|+||
T Consensus       152 Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aP  195 (371)
T 2xrw_A          152 DLKPSNIVVKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYYRAP  195 (371)
T ss_dssp             CCCGGGEEECTTSCEEECCCCC-------------------CTTCCH
T ss_pred             cCCHHHEEEcCCCCEEEEEeecccccccccc---cCCceecCCccCH
Confidence            999999          489999876543221   2345788899987

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.64  E-value=1.7e-16  Score=92.62  Aligned_cols=104  Identities=17%  Similarity=0.196  Sum_probs=76.5

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      +|++++++++++.......++.+++ .+++...+...  ...++..++..++.|++.|+.|+|++   +++|+|++|+| 
T Consensus        64 ~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NI  137 (298)
T 1csn_A           64 GCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLC--GRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNF  137 (298)
T ss_dssp             TCTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGE
T ss_pred             cCCCCCeEEeecCCCceeEEEEEec-CCCHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHE
Confidence            6899999999998877666666665 44444443322  22389999999999999999999999   99999999999 


Q ss_pred             --------------cCCCcccccCCCCccc-----ccccccCccccccCC
Q 047898           81 --------------IADFNLSNQAPNMAAR-----LHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 --------------i~~~g~~~~~~~~~~~-----~~~~~~~~~~~~~aP  111 (111)
                                    ++|||.++........     .......||+.|+||
T Consensus       138 l~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  187 (298)
T 1csn_A          138 LIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSI  187 (298)
T ss_dssp             EECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCH
T ss_pred             EeccCCCCCCCeEEEEECccccccccccccccccccCccCCCCCcccCCc
Confidence                          3688888765433221     012345688999987

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.64  E-value=1e-16  Score=92.96  Aligned_cols=105  Identities=19%  Similarity=0.258  Sum_probs=74.8

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.... ...+.+++..+++...+... ....+++.++..++.|++.|+.++|+.   +++|+|++++|
T Consensus        65 l~h~~i~~~~~~~~~~~-~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~N  139 (279)
T 1qpc_A           65 LQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAAN  139 (279)
T ss_dssp             CCCTTBCCEEEEECSSS-CEEEEECCTTCBHHHHTTSH-HHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred             CCCcCcceEEEEEcCCC-cEEEEecCCCCCHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhh
Confidence            58999999999987533 44555555555554444321 111388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+......... ......++..|+||
T Consensus       140 il~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aP  179 (279)
T 1qpc_A          140 ILVSDTLSCKIADFGLARLIEDNEYT-AREGAKFPIKWTAP  179 (279)
T ss_dssp             EEECTTSCEEECCCTTCEECSSSCEE-CCTTCCCCTTTSCH
T ss_pred             EEEcCCCCEEECCCcccccccCcccc-cccCCCCccCccCh
Confidence                      4899988765443221 12233456778887

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.64  E-value=6.9e-17  Score=94.05  Aligned_cols=105  Identities=24%  Similarity=0.327  Sum_probs=72.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.... ...+.+++..+.+...+...  ...++..++..++.|++.|+.++|+.   +++|+|++|+|
T Consensus        78 l~h~~i~~~~~~~~~~~-~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~N  151 (291)
T 1u46_A           78 LDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARN  151 (291)
T ss_dssp             CCCTTBCCEEEEECSSS-CEEEEECCTTCBHHHHHHHH--GGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGG
T ss_pred             CCCCCcccEEEEEccCC-ceeeEecccCCCHHHHHHhc--cCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchhe
Confidence            57999999999998754 34444555444443333221  12378899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccc-cccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARL-HSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~-~~~~~~~~~~~~aP  111 (111)
                                ++|||.+.......... ......++..|+||
T Consensus       152 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aP  193 (291)
T 1u46_A          152 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP  193 (291)
T ss_dssp             EEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCH
T ss_pred             EEEcCCCCEEEccccccccccccccchhhhccCCCCceeeCc
Confidence                      48999987665433221 12234567778887

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.64  E-value=1.7e-16  Score=95.45  Aligned_cols=97  Identities=26%  Similarity=0.378  Sum_probs=67.4

Q ss_pred             CCCccceeeeeeeeeCCcc------chhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeec
Q 047898            1 LKHENLVELLGYCVEGNLR------DELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQR   74 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~   74 (111)
                      ++||||+++++++...+..      .++.+++. +.+....     ...+++.++..++.|++.|+.|+|+.   +++|+
T Consensus        98 l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~  168 (371)
T 4exu_A           98 MQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIM-----GMEFSEEKIQYLVYQMLKGLKYIHSA---GVVHR  168 (371)
T ss_dssp             CCCTTBCCCSEEECSCSSSTTCCCCEEEEECCC-EEHHHHT-----TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred             cCCCCchhhhhheeccCCcccceeEEEEEcccc-ccHHHHh-----hcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCC
Confidence            5899999999999875543      22223332 2222111     12288999999999999999999999   99999


Q ss_pred             CCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           75 DIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        75 ~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |++|+|          ++|||.++.....     .....+|+.|+||
T Consensus       169 Dikp~NIll~~~~~~kL~Dfg~a~~~~~~-----~~~~~~t~~y~aP  210 (371)
T 4exu_A          169 DLKPGNLAVNEDCELKILDFGLARHADAE-----MTGYVVTRWYRAP  210 (371)
T ss_dssp             CCCGGGEEECTTCCEEECSTTCC-------------CTTCCCTTSCH
T ss_pred             CcCHHHeEECCCCCEEEEecCcccccccC-----cCCcccCccccCH
Confidence            999999          4899988754332     2345678889887

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.63  E-value=3e-16  Score=92.83  Aligned_cols=98  Identities=16%  Similarity=0.199  Sum_probs=71.4

Q ss_pred             CCccceeeeeeeeeCC--ccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 047898            2 KHENLVELLGYCVEGN--LRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSS   79 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~   79 (111)
                      .||||+++++++....  ...++++++..+.+.....      .++..++..++.|++.|+.|+|+.   +++|+|++|+
T Consensus        89 ~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~  159 (330)
T 3nsz_A           89 GGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPH  159 (330)
T ss_dssp             TSTTBCCEEEEEECTTTCCEEEEEECCCCCCHHHHGG------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGG
T ss_pred             CCCCEEEeeeeeccCCCCceEEEEeccCchhHHHHHH------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHH
Confidence            3999999999998733  2333444444443332221      278889999999999999999999   9999999999


Q ss_pred             C-----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           80 N-----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n-----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |           ++|||.++.......   .....++..|+||
T Consensus       160 Nil~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~~~~y~aP  199 (330)
T 3nsz_A          160 NVMIDHEHRKLRLIDWGLAEFYHPGQE---YNVRVASRYFKGP  199 (330)
T ss_dssp             GEEEETTTTEEEECCCTTCEECCTTCC---CCSCCSCGGGCCH
T ss_pred             HEEEcCCCCEEEEEeCCCceEcCCCCc---cccccccccccCh
Confidence            9           489999876543322   2344678888887

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.63  E-value=9.1e-17  Score=94.48  Aligned_cols=100  Identities=16%  Similarity=0.171  Sum_probs=70.9

Q ss_pred             CCccceeeeeeeeeCCccchhhhh-hhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            2 KHENLVELLGYCVEGNLRDELIWI-IHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      +|+||+++++++...+....++++ +..+.+...+..   ...+++.++..++.|++.|+.|+|+.   +++|+|++++|
T Consensus        96 ~h~~i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~N  169 (312)
T 2iwi_A           96 GHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITE---KGPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDEN  169 (312)
T ss_dssp             CCSSBCCEEEEC-----CEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGG
T ss_pred             CCCCeeeEEEEEecCCeEEEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhh
Confidence            799999999999876655555554 333443333322   22388999999999999999999999   99999999999


Q ss_pred             -----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 -----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 -----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                 ++|||.+.......    .....++..|+||
T Consensus       170 il~~~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~y~aP  207 (312)
T 2iwi_A          170 ILIDLRRGCAKLIDFGSGALLHDEP----YTDFDGTRVYSPP  207 (312)
T ss_dssp             EEEETTTTEEEECCCSSCEECCSSC----BCCCCSCTTTSCH
T ss_pred             EEEeCCCCeEEEEEcchhhhcccCc----ccccCCcccccCc
Confidence                       47899887654432    2345678888887

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.63  E-value=1.2e-16  Score=93.99  Aligned_cols=102  Identities=18%  Similarity=0.317  Sum_probs=68.0

Q ss_pred             CccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC--
Q 047898            3 HENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN--   80 (111)
Q Consensus         3 h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n--   80 (111)
                      |+||+++++++.......++.+ ...+++...+..   ...++..++..++.|++.|+.|+|+.   +++|+|++++|  
T Consensus        87 ~~~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl  159 (313)
T 3cek_A           87 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFL  159 (313)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEC-CCSEEHHHHHHH---CSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred             CCceEEEEEEeecCCEEEEEEe-cCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEE
Confidence            6999999999988665444444 223333333322   22378889999999999999999999   99999999999  


Q ss_pred             -------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 -------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 -------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                             ++|||.+................++..|+||
T Consensus       160 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aP  197 (313)
T 3cek_A          160 IVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPP  197 (313)
T ss_dssp             EETTEEEECCCSSSCC--------------CCGGGCCH
T ss_pred             EECCeEEEeeccccccccCccccccccCCCCCCCcCCH
Confidence                   4899998766543322223345688899987

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.63  E-value=7.2e-17  Score=93.98  Aligned_cols=102  Identities=23%  Similarity=0.308  Sum_probs=73.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+...++.+++..+.+...+..   ...++..++..++.|++.|+.++|+.   +++|+|++++|
T Consensus        78 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~N  151 (287)
T 2wei_A           78 LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIK---RKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPEN  151 (287)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGG
T ss_pred             ccCCCccEEEEEEeCCCeEEEEEEccCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhh
Confidence            5799999999999886655555555554443332221   12388999999999999999999999   99999999999


Q ss_pred             c-------------CCCcccccCCCCcccccccccCccccccCC
Q 047898           81 I-------------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 i-------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |             +|||.+........   .....++..|+||
T Consensus       152 Ilv~~~~~~~~~kL~Dfg~~~~~~~~~~---~~~~~~~~~y~aP  192 (287)
T 2wei_A          152 ILLESKEKDCDIKIIDFGLSTCFQQNTK---MKDRIGTAYYIAP  192 (287)
T ss_dssp             EEESCSSTTCCEEECSTTGGGTBCCCSS---CSCHHHHHTTCCH
T ss_pred             EEEecCCCcccEEEeccCcceeecCCCc---cccccCcccccCh
Confidence            3             68887765543321   1223467778876

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.62  E-value=8.5e-17  Score=96.51  Aligned_cols=103  Identities=24%  Similarity=0.342  Sum_probs=72.7

Q ss_pred             CCCccceeeeeeeeeCCc-----cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecC
Q 047898            1 LKHENLVELLGYCVEGNL-----RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRD   75 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~   75 (111)
                      ++||||+++++++.....     ..++.+++. +.+...+.    ...++..++..++.|++.|+.|+|+.   +++|+|
T Consensus        82 l~h~niv~~~~~~~~~~~~~~~~~~iv~e~~~-~~L~~~l~----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~D  153 (364)
T 3qyz_A           82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLME-TDLYKLLK----TQHLSNDHICYFLYQILRGLKYIHSA---NVLHRD  153 (364)
T ss_dssp             CCCTTBCCCCEEECCSSTTTCCCEEEEEECCS-EEHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCC
T ss_pred             cCCCCCccceeEEecCCccccceEEEEEcccC-cCHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCC
Confidence            589999999999976432     122223332 22222221    12388999999999999999999999   999999


Q ss_pred             CCCCC----------cCCCcccccCCCCcccc-cccccCccccccCC
Q 047898           76 IRSSN----------IADFNLSNQAPNMAARL-HSTRVLGTFSYHAP  111 (111)
Q Consensus        76 l~~~n----------i~~~g~~~~~~~~~~~~-~~~~~~~~~~~~aP  111 (111)
                      ++|+|          ++|||.+.......... ......||+.|+||
T Consensus       154 ikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  200 (364)
T 3qyz_A          154 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP  200 (364)
T ss_dssp             CCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCH
T ss_pred             CChHhEEECCCCCEEEEeCcceEecCCCCCccccccccccccCCCCC
Confidence            99999          48999987665433221 12345789999987

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.62  E-value=1.5e-16  Score=94.13  Aligned_cols=106  Identities=19%  Similarity=0.216  Sum_probs=62.2

Q ss_pred             CCccceeeeeeeeeCCc--------cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC--e
Q 047898            2 KHENLVELLGYCVEGNL--------RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPS--I   71 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~--i   71 (111)
                      +||||+++++++.....        ..++.+++. +.+...+........+++.++..++.|++.|+.|+|+.   +  +
T Consensus        84 ~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~i  159 (337)
T 3ll6_A           84 GHPNIVQFCSAASIGKEESDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPI  159 (337)
T ss_dssp             TSTTBCCEEEEEEECTTTSTTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCC
T ss_pred             cCCChhhccccccccccccccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCE
Confidence            49999999999963221        122223332 33333332212233489999999999999999999999   8  9


Q ss_pred             eecCCCCCC----------cCCCcccccCCCCcccc----------cccccCccccccCC
Q 047898           72 IQRDIRSSN----------IADFNLSNQAPNMAARL----------HSTRVLGTFSYHAP  111 (111)
Q Consensus        72 ~h~~l~~~n----------i~~~g~~~~~~~~~~~~----------~~~~~~~~~~~~aP  111 (111)
                      +|+|++|+|          ++|||.+..........          ......+|+.|+||
T Consensus       160 vH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aP  219 (337)
T 3ll6_A          160 IHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTP  219 (337)
T ss_dssp             BCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC---------------------------
T ss_pred             EEccCCcccEEECCCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCCh
Confidence            999999999          48999987655432210          01134578889987

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.61  E-value=3.1e-17  Score=102.83  Aligned_cols=97  Identities=19%  Similarity=0.185  Sum_probs=71.3

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++..++...+...+++++++.+++...+..           ...++.|++.|+.|+|++   +++|||+||+|
T Consensus       396 l~h~nIv~~~~~~~~~~~~~lVmE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~N  461 (540)
T 3en9_A          396 VKDFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSN  461 (540)
T ss_dssp             GGGGTCCCCCEEEEETTTTEEEEECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTS
T ss_pred             cCCCCcCceEEEEEeCCccEEEEECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHH
Confidence            4799999666666665555666666665555544432           457889999999999999   99999999999


Q ss_pred             --------cCCCcccccCCCCcccc-----cccccCccccccCC
Q 047898           81 --------IADFNLSNQAPNMAARL-----HSTRVLGTFSYHAP  111 (111)
Q Consensus        81 --------i~~~g~~~~~~~~~~~~-----~~~~~~~~~~~~aP  111 (111)
                              ++|||+++.........     ...+..||+.||||
T Consensus       462 ILl~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~AP  505 (540)
T 3en9_A          462 FIFDKDLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFD  505 (540)
T ss_dssp             EEESSSEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHH
T ss_pred             EEECCeEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCH
Confidence                    48999998775532211     12356789999987

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.61  E-value=3.2e-16  Score=92.62  Aligned_cols=100  Identities=16%  Similarity=0.152  Sum_probs=73.6

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhh-hhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHV-ITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      .|+||+++++++...+....+++++.. +.+...+..   ...++...+..++.|++.|+.|+|+.   +++|+|++++|
T Consensus       106 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~N  179 (320)
T 3a99_A          106 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE---RGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDEN  179 (320)
T ss_dssp             SSCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred             CCCCceEEEEEEecCCcEEEEEEcCCCCccHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHH
Confidence            379999999999987655555554432 333322221   22378899999999999999999999   99999999999


Q ss_pred             -----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 -----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 -----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                 ++|||.++......    .....+|..|+||
T Consensus       180 Ill~~~~~~~kL~Dfg~~~~~~~~~----~~~~~gt~~y~aP  217 (320)
T 3a99_A          180 ILIDLNRGELKLIDFGSGALLKDTV----YTDFDGTRVYSPP  217 (320)
T ss_dssp             EEEETTTTEEEECCCTTCEECCSSC----BCCCCSCGGGSCH
T ss_pred             EEEeCCCCCEEEeeCcccccccccc----ccCCCCCccCCCh
Confidence                       48899887654332    2345688889987

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.61  E-value=1.5e-16  Score=92.92  Aligned_cols=106  Identities=23%  Similarity=0.237  Sum_probs=67.8

Q ss_pred             CCCccceeeeeeeeeCCc-------------cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcC
Q 047898            1 LKHENLVELLGYCVEGNL-------------RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKV   67 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~   67 (111)
                      ++||||+++++++.....             ..++.+++..+++...+...  ...++..++..++.|++.|+.|+|++ 
T Consensus        59 l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~-  135 (303)
T 1zy4_A           59 LNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSE--NLNQQRDEYWRLFRQILEALSYIHSQ-  135 (303)
T ss_dssp             CCCTTBCCEEEEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHHS--CGGGCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             cCchHHHHHHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhcc--ccccchHHHHHHHHHHHHHHHHHHhC-
Confidence            579999999999875321             12333444444444333221  22367788899999999999999999 


Q ss_pred             CCCeeecCCCCCC----------cCCCcccccCCCCcc------------cccccccCccccccCC
Q 047898           68 QPSIIQRDIRSSN----------IADFNLSNQAPNMAA------------RLHSTRVLGTFSYHAP  111 (111)
Q Consensus        68 ~~~i~h~~l~~~n----------i~~~g~~~~~~~~~~------------~~~~~~~~~~~~~~aP  111 (111)
                        +++|+|++++|          ++|||.+........            ........++..|+||
T Consensus       136 --~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aP  199 (303)
T 1zy4_A          136 --GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVAT  199 (303)
T ss_dssp             --TCCCSCCCGGGEEECTTSCEEECCCCCCSCTTC-------------------------CTTSCH
T ss_pred             --CeecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCc
Confidence              99999999999          489998876543210            0012334678888887

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.61  E-value=1.8e-16  Score=97.11  Aligned_cols=106  Identities=19%  Similarity=0.285  Sum_probs=65.9

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCC----CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCC
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSP----VLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIR   77 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~   77 (111)
                      +||||+++++++.+.....++.+++. +++...+.......    ..+...+..++.|++.|+.|||++   +++|+|++
T Consensus        67 ~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLk  142 (434)
T 2rio_A           67 DHPNVIRYYCSETTDRFLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLK  142 (434)
T ss_dssp             TSTTBCCEEEEEECSSEEEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCS
T ss_pred             CCCCcCeEEEEEecCCeEEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCC
Confidence            79999999999988766556666653 34333332221110    012234567899999999999999   99999999


Q ss_pred             CCCc-----------------------CCCcccccCCCCcccc--cccccCccccccCC
Q 047898           78 SSNI-----------------------ADFNLSNQAPNMAARL--HSTRVLGTFSYHAP  111 (111)
Q Consensus        78 ~~ni-----------------------~~~g~~~~~~~~~~~~--~~~~~~~~~~~~aP  111 (111)
                      |+||                       +|||++..........  ......||+.|+||
T Consensus       143 p~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aP  201 (434)
T 2rio_A          143 PQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAP  201 (434)
T ss_dssp             GGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------CCTTSCH
T ss_pred             hHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCH
Confidence            9983                       5788877654432211  12345789999997

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.61  E-value=8.7e-16  Score=91.77  Aligned_cols=97  Identities=26%  Similarity=0.374  Sum_probs=67.2

Q ss_pred             CCCccceeeeeeeeeCCcc------chhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeec
Q 047898            1 LKHENLVELLGYCVEGNLR------DELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQR   74 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~   74 (111)
                      ++||||+++++++......      ..+.+++. +.+....   .  ..++..++..++.|++.|+.|+|++   +++|+
T Consensus        80 l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~---~--~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~  150 (353)
T 3coi_A           80 MQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIM---G--LKFSEEKIQYLVYQMLKGLKYIHSA---GVVHR  150 (353)
T ss_dssp             CCCTTBCCCSEEECSCSSGGGCCCCEEEEECCS-EEGGGTT---T--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred             cCCCCcccHhheEecccccccceeEEEEecccc-CCHHHHh---c--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccC
Confidence            5799999999999875532      22223322 2222221   1  2388999999999999999999999   99999


Q ss_pred             CCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           75 DIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        75 ~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |++|+|          ++|||.+......     .....+|..|+||
T Consensus       151 dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~-----~~~~~~t~~y~aP  192 (353)
T 3coi_A          151 DLKPGNLAVNEDCELKILDFGLARHADAE-----MTGYVVTRWYRAP  192 (353)
T ss_dssp             SCCGGGEEECTTCCEEECSTTCTTC-------------CCSBCCSCH
T ss_pred             CCCHHHEeECCCCcEEEeecccccCCCCC-----ccccccCcCcCCH
Confidence            999999          4899988754322     2234678888887

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.60  E-value=2.6e-17  Score=95.40  Aligned_cols=106  Identities=20%  Similarity=0.269  Sum_probs=72.1

Q ss_pred             CCCccceeeeeeeee--CCccchhhhhhhhhhcccCcCCCC-CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC-----ee
Q 047898            1 LKHENLVELLGYCVE--GNLRDELIWIIHVITCKKGVQGAQ-PSPVLDWMTRVRIVVDALRGLEYLHEKVQPS-----II   72 (111)
Q Consensus         1 l~h~~iv~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~-----i~   72 (111)
                      ++||||+++++++..  .....++.+++..+++...+.... ....+++.++..++.|++.|+.|+|+.   +     ++
T Consensus        62 l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~iv  138 (279)
T 2w5a_A           62 LKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVL  138 (279)
T ss_dssp             CCCTTBCCEEEEEEEGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------C
T ss_pred             cCCCCCCeEEEEEecCCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeE
Confidence            589999999998864  233344555555444443332211 122388999999999999999999999   7     99


Q ss_pred             ecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           73 QRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        73 h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |+|++++|          ++|||.+.........  .....++..|+||
T Consensus       139 H~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aP  185 (279)
T 2w5a_A          139 HRDLKPANVFLDGKQNVKLGDFGLARILNHDTSF--AKTFVGTPYYMSP  185 (279)
T ss_dssp             CCCCSGGGEEECSSSCEEECCCCHHHHC---CHH--HHHHHSCCTTCCH
T ss_pred             EeccchhhEEEcCCCCEEEecCchheeecccccc--ccccCCCccccCh
Confidence            99999999          4789988765433221  2234578888887

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.59  E-value=3.9e-16  Score=92.58  Aligned_cols=107  Identities=26%  Similarity=0.366  Sum_probs=72.4

Q ss_pred             CCCccceeeeeeeeeCC-----ccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcC------CC
Q 047898            1 LKHENLVELLGYCVEGN-----LRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKV------QP   69 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~------~~   69 (111)
                      ++||||+++++.+....     ...++++++..+++...+..    ...++.....++.|++.|+.|+|+..      ..
T Consensus        64 ~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~  139 (336)
T 3g2f_A           64 MEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSL----HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKP  139 (336)
T ss_dssp             CCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBC
T ss_pred             ccCcchhhheecccccccCCCceEEEEEecCCCCcHHHHHhh----cccchhHHHHHHHHHHHHHHHHHhhhcccccccc
Confidence            57999999998665321     11244455555555444421    12578888999999999999999862      22


Q ss_pred             CeeecCCCCCC----------cCCCcccccCCCCcc------cccccccCccccccCC
Q 047898           70 SIIQRDIRSSN----------IADFNLSNQAPNMAA------RLHSTRVLGTFSYHAP  111 (111)
Q Consensus        70 ~i~h~~l~~~n----------i~~~g~~~~~~~~~~------~~~~~~~~~~~~~~aP  111 (111)
                      +++|+|+||+|          ++|||.+........      ........||..|+||
T Consensus       140 ~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  197 (336)
T 3g2f_A          140 AISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAP  197 (336)
T ss_dssp             CEECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCH
T ss_pred             ceeecccccceEEEcCCCcEEEeeccceeecccccccCccccccccccCCCccceeCc
Confidence            79999999999          489999876543211      1112345689999997

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.59  E-value=6.1e-17  Score=97.55  Aligned_cols=59  Identities=15%  Similarity=0.305  Sum_probs=47.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           44 LDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        44 l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +++..+..++.|++.|+.|+|++   +++|+|+||+|          ++|||+++.....     .....| +.|+||
T Consensus       203 l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aP  271 (377)
T 3byv_A          203 LVHHARLQLTLQVIRLLASLHHY---GLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAR-----VVSSVS-RGFEPP  271 (377)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCGGGCEETTCE-----EECCCC-TTCCCH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEechhheecCCc-----ccCCCC-cCccCh
Confidence            34577788999999999999999   99999999999          4899998754321     234566 889987

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.59  E-value=6e-16  Score=92.29  Aligned_cols=103  Identities=22%  Similarity=0.327  Sum_probs=69.6

Q ss_pred             CCCccceeeeeeeeeCC-----ccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecC
Q 047898            1 LKHENLVELLGYCVEGN-----LRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRD   75 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~   75 (111)
                      ++||||+++++++....     ...++.+++. +.+...+.    ...++..++..++.|++.|+.|+|++   +++|+|
T Consensus        66 l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~----~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~D  137 (353)
T 2b9h_A           66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQ-TDLHRVIS----TQMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRD  137 (353)
T ss_dssp             CCCTTBCCEEEECCCSCSTTCCCEEEEECCCS-EEHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSC
T ss_pred             CcCCCcCCeeeeecccccCccceEEEEEeccC-ccHHHHHh----hcCCCHHHHHHHHHHHHHHHHHHHHC---CeecCC
Confidence            58999999999887542     1223333333 22222221    12388999999999999999999999   999999


Q ss_pred             CCCCC----------cCCCcccccCCCCcccc--------cccccCccccccCC
Q 047898           76 IRSSN----------IADFNLSNQAPNMAARL--------HSTRVLGTFSYHAP  111 (111)
Q Consensus        76 l~~~n----------i~~~g~~~~~~~~~~~~--------~~~~~~~~~~~~aP  111 (111)
                      ++|+|          ++|||.+..........        ......||..|+||
T Consensus       138 lkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  191 (353)
T 2b9h_A          138 LKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAP  191 (353)
T ss_dssp             CCGGGEEECTTCCEEECCCTTCEECC----------------CCCCCCGGGCCH
T ss_pred             CCHHHeEEcCCCcEEEEecccccccccccccccCccccccchhhccccccccCC
Confidence            99999          48999987654322110        01234678899987

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.59  E-value=2.1e-16  Score=94.40  Aligned_cols=98  Identities=15%  Similarity=0.277  Sum_probs=67.4

Q ss_pred             eeeeeee-CCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-------
Q 047898            9 LLGYCVE-GNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-------   80 (111)
Q Consensus         9 l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-------   80 (111)
                      +++++.. .....++++++ .+++...+... ....+++.++..++.|++.|+.|+|++   +++|+|++|+|       
T Consensus       122 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl~~~~~  196 (352)
T 2jii_A          122 CMGFGVHQDKYRFLVLPSL-GRSLQSALDVS-PKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIFVDPED  196 (352)
T ss_dssp             CCEEEEETTTEEEEEEECC-CEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEEEETTE
T ss_pred             hhhccccCCcEEEEEecCC-CcCHHHHHHhC-CcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEEcCCC
Confidence            6667665 33334444555 44444444322 123489999999999999999999999   99999999999       


Q ss_pred             -----cCCCcccccCCCCcccc-----cccccCccccccCC
Q 047898           81 -----IADFNLSNQAPNMAARL-----HSTRVLGTFSYHAP  111 (111)
Q Consensus        81 -----i~~~g~~~~~~~~~~~~-----~~~~~~~~~~~~aP  111 (111)
                           ++|||.++.........     ......||+.|+||
T Consensus       197 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  237 (352)
T 2jii_A          197 QSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISM  237 (352)
T ss_dssp             EEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCH
T ss_pred             CceEEEecCcceeeccCCCccccccccccccccCCccccCH
Confidence                 48999987655432211     01334788899987

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.59  E-value=1.4e-15  Score=89.46  Aligned_cols=103  Identities=22%  Similarity=0.288  Sum_probs=68.6

Q ss_pred             CCCccceeeeeeeeeCC--------------ccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhc
Q 047898            1 LKHENLVELLGYCVEGN--------------LRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEK   66 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~   66 (111)
                      ++||||+++++++...+              ...++.+++. +.+...+.    ...++...+..++.|++.|+.|+|++
T Consensus        65 l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~  139 (320)
T 2i6l_A           65 LDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYME-TDLANVLE----QGPLLEEHARLFMYQLLRGLKYIHSA  139 (320)
T ss_dssp             CCCTTBCCEEEEECTTSCBCCC----CCSCSEEEEEEECCS-EEHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCCCCeeEEEEeccccccccccccccccccCceeEEeeccC-CCHHHHhh----cCCccHHHHHHHHHHHHHHHHHHHhC
Confidence            57999999999885432              1223334443 23333221    23388899999999999999999999


Q ss_pred             CCCCeeecCCCCCC-----------cCCCcccccCCCCccc-ccccccCccccccCC
Q 047898           67 VQPSIIQRDIRSSN-----------IADFNLSNQAPNMAAR-LHSTRVLGTFSYHAP  111 (111)
Q Consensus        67 ~~~~i~h~~l~~~n-----------i~~~g~~~~~~~~~~~-~~~~~~~~~~~~~aP  111 (111)
                         +++|+|++|+|           ++|||.++........ .......++..|+||
T Consensus       140 ---~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aP  193 (320)
T 2i6l_A          140 ---NVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSP  193 (320)
T ss_dssp             ---TCBCCCCSGGGEEEETTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCH
T ss_pred             ---CEecCCCCHHHEEEcCCCCeEEEccCccccccCCCcccccccccccccccccCc
Confidence               99999999999           4789988765432111 012234567788886

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.58  E-value=4.4e-16  Score=91.63  Aligned_cols=102  Identities=22%  Similarity=0.294  Sum_probs=66.8

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHE-KVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~-~~~~~i~h~~l~~~   79 (111)
                      ++||||+++++++...+...++++++. ........  .....++...+..++.|++.|+.|+|+ .   +++|+|++++
T Consensus        81 ~~h~~i~~~~~~~~~~~~~~lv~e~~~-~~~~~l~~--~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~  154 (318)
T 2dyl_A           81 HDCPYIVQCFGTFITNTDVFIAMELMG-TCAEKLKK--RMQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPS  154 (318)
T ss_dssp             TTCTTBCCEEEEEECSSEEEEEECCCS-EEHHHHHH--HHTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGG
T ss_pred             cCCCceeeEEEEEecCCcEEEEEeccC-CcHHHHHH--HhccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHH
Confidence            479999999999998776555555552 11111111  112338889999999999999999998 6   8999999999


Q ss_pred             C----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           80 N----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |          ++|||.+........   .....++..|+||
T Consensus       155 Nil~~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aP  193 (318)
T 2dyl_A          155 NILLDERGQIKLCDFGISGRLVDDKA---KDRSAGCAAYMAP  193 (318)
T ss_dssp             GEEECTTSCEEECCCTTC-----------------CCTTCCH
T ss_pred             HEEECCCCCEEEEECCCchhccCCcc---ccccCCCccccCh
Confidence            9          489998865543321   2234578888887

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.57  E-value=1.6e-16  Score=92.11  Aligned_cols=102  Identities=25%  Similarity=0.335  Sum_probs=66.3

Q ss_pred             CCCccceeeeeeeeeCC-ccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEGN-LRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~   79 (111)
                      ++||||+++++++.... ....+.+++..+++...+... ....++..++..++.|++.|+.++|+.   +++|+|++|+
T Consensus        71 l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~  146 (278)
T 1byg_A           71 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAAR  146 (278)
T ss_dssp             CCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGG
T ss_pred             CCCCCEeeEEEEEEcCCCceEEEEecCCCCCHHHHHHhc-ccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcc
Confidence            57999999999976543 334455555544444333211 111267888999999999999999999   9999999999


Q ss_pred             C----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           80 N----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |          +.|||.+.......     ....++..|+||
T Consensus       147 Nil~~~~~~~~l~Dfg~~~~~~~~~-----~~~~~~~~y~aP  183 (278)
T 1byg_A          147 NVLVSEDNVAKVSDFGLTKEASSTQ-----DTGKLPVKWTAP  183 (278)
T ss_dssp             GEEECTTSCEEECCCCC-----------------CCTTTSCH
T ss_pred             eEEEeCCCcEEEeeccccccccccc-----cCCCccccccCH
Confidence            9          48999876543321     223456778876

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.57  E-value=5.2e-16  Score=91.38  Aligned_cols=108  Identities=24%  Similarity=0.310  Sum_probs=72.4

Q ss_pred             CCCccceeeeeeeeeC----CccchhhhhhhhhhcccCcCCC-CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecC
Q 047898            1 LKHENLVELLGYCVEG----NLRDELIWIIHVITCKKGVQGA-QPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRD   75 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~   75 (111)
                      ++||||+++++++...    .....+++++..+++...+... .....+++.++..++.|++.|+.|+|++   +++|+|
T Consensus        83 l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~d  159 (317)
T 2buj_A           83 FNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRD  159 (317)
T ss_dssp             CCCTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCC
T ss_pred             cCCCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCC
Confidence            5799999999999732    1223444555544443333221 1223489999999999999999999999   999999


Q ss_pred             CCCCC----------cCCCcccccCCCCcccc-------cccccCccccccCC
Q 047898           76 IRSSN----------IADFNLSNQAPNMAARL-------HSTRVLGTFSYHAP  111 (111)
Q Consensus        76 l~~~n----------i~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~aP  111 (111)
                      ++|+|          +.|||.+..........       ......|+..|+||
T Consensus       160 lkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  212 (317)
T 2buj_A          160 LKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAP  212 (317)
T ss_dssp             CCGGGEEECTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCG
T ss_pred             CCHHHEEEcCCCCEEEEecCcchhcccccccccccccccccccccCCcccCCH
Confidence            99999          47898776543221110       01123467888887

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.55  E-value=1.2e-15  Score=90.20  Aligned_cols=105  Identities=25%  Similarity=0.277  Sum_probs=63.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCC--CCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQG--AQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRS   78 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~   78 (111)
                      ++||||+++++++...+...++++++.. .+...+..  ......+++..+..++.|++.|+.|+|+..  +++|+|+++
T Consensus        78 ~~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp  154 (327)
T 3aln_A           78 SDCPYIVQFYGALFREGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKP  154 (327)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCG
T ss_pred             CCCCcEeeeeeEEEeCCceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCH
Confidence            4799999999999987655555555543 22111110  011233888999999999999999999843  799999999


Q ss_pred             CC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           79 SN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        79 ~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +|          ++|||.++.......   .....|+..|+||
T Consensus       155 ~NIll~~~~~~kl~Dfg~~~~~~~~~~---~~~~~gt~~y~aP  194 (327)
T 3aln_A          155 SNILLDRSGNIKLCDFGISGQLVDSIA---KTRDAGCRPYMAP  194 (327)
T ss_dssp             GGEEEETTTEEEECCCSSSCC----------------------
T ss_pred             HHEEEcCCCCEEEccCCCceecccccc---cccCCCCccccCc
Confidence            99          489999876543322   2234678889887

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.54  E-value=6.6e-15  Score=87.13  Aligned_cols=100  Identities=13%  Similarity=0.203  Sum_probs=71.5

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCc
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI   81 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~ni   81 (111)
                      .|++++++++++...+...++++++ .+.+...+... ....++..++..++.|++.|+.|+|++   +++|+|++|+||
T Consensus        75 ~~~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Ni  149 (339)
T 1z57_A           75 STFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKEN-GFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENI  149 (339)
T ss_dssp             CTTCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGE
T ss_pred             CceeeEeeecccccCCcEEEEEcCC-CCCHHHHHHhc-CCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHE
Confidence            3556999999999877666666665 33333333222 222478999999999999999999999   999999999994


Q ss_pred             -----------------------------CCCcccccCCCCcccccccccCccccccCC
Q 047898           82 -----------------------------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        82 -----------------------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                                   +|||.+......     .....+|..|+||
T Consensus       150 l~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aP  203 (339)
T 1z57_A          150 LFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAP  203 (339)
T ss_dssp             EESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCH
T ss_pred             EEeccccccccCCccccccccccCCCceEeeCcccccCccc-----cccccCCccccCh
Confidence                                         366666543221     2345688899987

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.54  E-value=5.7e-15  Score=91.63  Aligned_cols=104  Identities=20%  Similarity=0.307  Sum_probs=71.2

Q ss_pred             CC-ccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            2 KH-ENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         2 ~h-~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      +| +++..+..++...+...++++++ .+.+...+...  ...+++.++..++.|++.|+.|||++   +++|+|||++|
T Consensus        60 ~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL~~ll~~~--~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~N  133 (483)
T 3sv0_A           60 QGGTGIPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNFC--SRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDN  133 (483)
T ss_dssp             TTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGG
T ss_pred             cCCCCCCeEEEEEeeCCEEEEEEECC-CCCHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcce
Confidence            44 45556666666655444555555 44444433321  22389999999999999999999999   99999999999


Q ss_pred             -------------cCCCcccccCCCCcccc-----cccccCccccccCC
Q 047898           81 -------------IADFNLSNQAPNMAARL-----HSTRVLGTFSYHAP  111 (111)
Q Consensus        81 -------------i~~~g~~~~~~~~~~~~-----~~~~~~~~~~~~aP  111 (111)
                                   |+|||+++.........     ......||..|+||
T Consensus       134 ILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aP  182 (483)
T 3sv0_A          134 FLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASV  182 (483)
T ss_dssp             EEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCH
T ss_pred             EEEecCCCCCeEEEEeCCcceeccCCccccccccccccccCCCccccCH
Confidence                         37999987654432211     12256789999987

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.54  E-value=5.2e-15  Score=89.32  Aligned_cols=101  Identities=17%  Similarity=0.126  Sum_probs=72.3

Q ss_pred             CccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC--
Q 047898            3 HENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN--   80 (111)
Q Consensus         3 h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n--   80 (111)
                      |++|+++.+++...+...++++++. +.+...+... ....+++..+..++.|++.|+.|+|+. ..+++|+|+||+|  
T Consensus       115 ~~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIl  191 (382)
T 2vx3_A          115 KYYIVHLKRHFMFRNHLCLVFEMLS-YNLYDLLRNT-NFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENIL  191 (382)
T ss_dssp             GGGBCCEEEEEEETTEEEEEEECCC-CBHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEE
T ss_pred             ceeEEEeeeeeccCCceEEEEecCC-CCHHHHHhhc-CcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEE
Confidence            4569999999998776666666654 2333333222 122388999999999999999999952 1189999999999  


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+......     .....+|+.|+||
T Consensus       192 l~~~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aP  227 (382)
T 2vx3_A          192 LCNPKRSAIKIVDFGSSCQLGQR-----IYQYIQSRFYRSP  227 (382)
T ss_dssp             ESSTTSCCEEECCCTTCEETTCC-----CCSSCSCGGGCCH
T ss_pred             EecCCCCcEEEEeccCceecccc-----cccccCCccccCh
Confidence                      4789988765332     2345788899987

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.54  E-value=5.1e-16  Score=93.36  Aligned_cols=54  Identities=11%  Similarity=0.140  Sum_probs=43.3

Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           50 VRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        50 ~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      ..++.|++.|+.|||++   +++|+||||+|          ++|||+++......     ....+|+.|+||
T Consensus       197 ~~i~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~-----~~~~~t~~y~aP  260 (371)
T 3q60_A          197 HILTAQLIRLAANLQSK---GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRG-----PASSVPVTYAPR  260 (371)
T ss_dssp             HHHHHHHHHHHHHHHHT---TEEETTCSGGGEEECTTSCEEECCGGGEEETTCEE-----EGGGSCGGGCCH
T ss_pred             HHHHHHHHHHHHHHHHC---CCccCcCCHHHEEECCCCCEEEEecceeeecCCCc-----cCccCCcCCcCh
Confidence            56669999999999999   99999999999          48999988654322     123456889987

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.51  E-value=5.3e-15  Score=88.76  Aligned_cols=100  Identities=19%  Similarity=0.233  Sum_probs=68.7

Q ss_pred             CccceeeeeeeeeCCc----cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 047898            3 HENLVELLGYCVEGNL----RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRS   78 (111)
Q Consensus         3 h~~iv~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~   78 (111)
                      |+||+++++++...+.    ..++++++ .+.+...+... ....++..++..++.|++.|+.|+|++.  +++|+|++|
T Consensus        85 ~~~i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp  160 (373)
T 1q8y_A           85 ANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKY-EHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKP  160 (373)
T ss_dssp             HTTBCCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSG
T ss_pred             cchHHHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHh-hccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCCh
Confidence            8999999999986431    12222332 23333332221 2233889999999999999999999942  899999999


Q ss_pred             CCc----------------CCCcccccCCCCcccccccccCccccccCC
Q 047898           79 SNI----------------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        79 ~ni----------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +||                +|||.+......     .....+|+.|+||
T Consensus       161 ~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aP  204 (373)
T 1q8y_A          161 ENVLMEIVDSPENLIQIKIADLGNACWYDEH-----YTNSIQTREYRSP  204 (373)
T ss_dssp             GGEEEEEEETTTTEEEEEECCCTTCEETTBC-----CCSCCSCGGGCCH
T ss_pred             HHeEEeccCCCcCcceEEEcccccccccCCC-----CCCCCCCccccCc
Confidence            993                688887655332     2234688999987

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.50  E-value=1.9e-14  Score=83.92  Aligned_cols=104  Identities=19%  Similarity=0.327  Sum_probs=69.7

Q ss_pred             CCccceeeeeee-eeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            2 KHENLVELLGYC-VEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         2 ~h~~iv~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      +|++++..+..+ .......++.+++ .+++...+...  ...+++.++..++.|++.|+.|+|+.   +++|+|++|+|
T Consensus        62 ~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~N  135 (296)
T 4hgt_A           62 QGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDN  135 (296)
T ss_dssp             TTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred             cCCCCCCeeeeecCCCCceEEEEEcc-CCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHH
Confidence            566666665555 4444334444554 44443333221  22389999999999999999999999   99999999999


Q ss_pred             -------------cCCCcccccCCCCccc-----ccccccCccccccCC
Q 047898           81 -------------IADFNLSNQAPNMAAR-----LHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 -------------i~~~g~~~~~~~~~~~-----~~~~~~~~~~~~~aP  111 (111)
                                   ++|||.++........     .......+|..|+||
T Consensus       136 Il~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  184 (296)
T 4hgt_A          136 FLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI  184 (296)
T ss_dssp             EEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCH
T ss_pred             eeeeccCCCCeEEEecCccceeccCcccCccCCCCcccccCCCccccch
Confidence                         3789988765443221     012345788999987

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.50  E-value=1e-14  Score=85.42  Aligned_cols=88  Identities=14%  Similarity=0.198  Sum_probs=65.3

Q ss_pred             CCCccceeeeeeeee----CCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCC
Q 047898            1 LKHENLVELLGYCVE----GNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDI   76 (111)
Q Consensus         1 l~h~~iv~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l   76 (111)
                      ++||||+++++++..    .....++++++..+++...+... ....+++.++..++.|++.|+.|+|+.   +++|+|+
T Consensus        68 ~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl  143 (299)
T 3m2w_A           68 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDV  143 (299)
T ss_dssp             TTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             ccCCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence            379999999999876    33334455555554544444332 223489999999999999999999999   9999999


Q ss_pred             CCCC-------------cCCCcccccCCC
Q 047898           77 RSSN-------------IADFNLSNQAPN   92 (111)
Q Consensus        77 ~~~n-------------i~~~g~~~~~~~   92 (111)
                      +|+|             ++|||.+.....
T Consensus       144 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~  172 (299)
T 3m2w_A          144 KPENLLYTSKRPNAILKLTDFGFAKETTG  172 (299)
T ss_dssp             SGGGEEESSSSTTCCEEECCCTTCEECTT
T ss_pred             CHHHEEEecCCCCCcEEEecccccccccc
Confidence            9999             368888765543

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.47  E-value=4.3e-14  Score=82.42  Aligned_cols=104  Identities=19%  Similarity=0.318  Sum_probs=69.4

Q ss_pred             CCccceeeeeeee-eCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            2 KHENLVELLGYCV-EGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      +|++++..+..+. ......++.+++ .+++...+...  ...+++.++..++.|++.|+.|+|++   +++|+|++|+|
T Consensus        62 ~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~N  135 (296)
T 3uzp_A           62 QGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDN  135 (296)
T ss_dssp             TTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGG
T ss_pred             hcCCCCCccccccCCCCceEEEEEec-CCCHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHH
Confidence            5666655555554 444334444555 44444333221  22389999999999999999999999   99999999999


Q ss_pred             -------------cCCCcccccCCCCcccc-----cccccCccccccCC
Q 047898           81 -------------IADFNLSNQAPNMAARL-----HSTRVLGTFSYHAP  111 (111)
Q Consensus        81 -------------i~~~g~~~~~~~~~~~~-----~~~~~~~~~~~~aP  111 (111)
                                   ++|||.+..........     ......||..|+||
T Consensus       136 Il~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  184 (296)
T 3uzp_A          136 FLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI  184 (296)
T ss_dssp             EEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCH
T ss_pred             eEEecCCCCCeEEEeeCCCcccccccccccccccccccccccccccCCh
Confidence                         37899887654432210     12345688899987

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.47  E-value=6.2e-14  Score=83.50  Aligned_cols=98  Identities=15%  Similarity=0.133  Sum_probs=68.9

Q ss_pred             ccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCc--
Q 047898            4 ENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI--   81 (111)
Q Consensus         4 ~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~ni--   81 (111)
                      .+++.+.+++...+...++++++.. .+...+... ....+++.++..++.|++.|+.|+|++   +++|+|++|+||  
T Consensus        82 ~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll  156 (355)
T 2eu9_A           82 FLCVLMSDWFNFHGHMCIAFELLGK-NTFEFLKEN-NFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILF  156 (355)
T ss_dssp             SCBCCEEEEEEETTEEEEEEECCCC-BHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEE
T ss_pred             eeEEEeeeeeeeCCeEEEEEeccCC-ChHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEE
Confidence            3488999998887655555565532 222222211 222388999999999999999999999   999999999993  


Q ss_pred             ---------------------------CCCcccccCCCCcccccccccCccccccCC
Q 047898           82 ---------------------------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        82 ---------------------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                                 +|||.+......     .....||..|+||
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aP  208 (355)
T 2eu9_A          157 VNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPP  208 (355)
T ss_dssp             SCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCH
T ss_pred             ecccccccccccccccccccCCCcEEEeecCcccccccc-----ccCCcCCCcccCC
Confidence                                       467776543222     2345688999987

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.45  E-value=4.1e-14  Score=85.39  Aligned_cols=75  Identities=27%  Similarity=0.290  Sum_probs=51.4

Q ss_pred             CccceeeeeeeeeC----CccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 047898            3 HENLVELLGYCVEG----NLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRS   78 (111)
Q Consensus         3 h~~iv~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~   78 (111)
                      |+||+++++++...    ....++++++. +.+...+... ....+++.++..++.|++.|+.|+|++.  +++|+|+||
T Consensus       100 ~~~iv~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp  175 (397)
T 1wak_A          100 REMVVQLLDDFKISGVNGTHICMVFEVLG-HHLLKWIIKS-NYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKP  175 (397)
T ss_dssp             GGGBCCEEEEEEEEETTEEEEEEEECCCC-CBHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSG
T ss_pred             cceeeeeecceeecCCCCceEEEEEeccC-ccHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCH
Confidence            78899999998732    22233334432 2222222111 1233899999999999999999999843  799999999


Q ss_pred             CCc
Q 047898           79 SNI   81 (111)
Q Consensus        79 ~ni   81 (111)
                      +||
T Consensus       176 ~NI  178 (397)
T 1wak_A          176 ENI  178 (397)
T ss_dssp             GGE
T ss_pred             HHe
Confidence            984

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.43  E-value=9.1e-14  Score=81.14  Aligned_cols=73  Identities=8%  Similarity=-0.036  Sum_probs=58.8

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++...+...++.+++..+++...+..   .  ....+...++.|++.|+.|+|++   +++|+|+|++|
T Consensus        88 l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~---~--~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~N  159 (286)
T 3uqc_A           88 IDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADT---S--PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSR  159 (286)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEEECCCEEEHHHHHTT---C--CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGG
T ss_pred             CCCCCcceeeEEEEECCcEEEEEEecCCCCHHHHHhc---C--CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCccc
Confidence            5899999999999987766667677766555555422   1  34556788999999999999999   99999999999


Q ss_pred             c
Q 047898           81 I   81 (111)
Q Consensus        81 i   81 (111)
                      |
T Consensus       160 I  160 (286)
T 3uqc_A          160 V  160 (286)
T ss_dssp             E
T ss_pred             E
Confidence            4

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.22  E-value=4.8e-12  Score=77.25  Aligned_cols=59  Identities=17%  Similarity=0.348  Sum_probs=48.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           44 LDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        44 l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +++..+..++.|++.|+.|||++   +++||||||+|          ++|||+++.....     .....| +.|+||
T Consensus       208 l~~~~~~~i~~qi~~aL~~LH~~---~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aP  276 (413)
T 3dzo_A          208 LVHHARLQLTLQVIRLLASLHHY---GLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPP  276 (413)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhC---CcccCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCc
Confidence            66777888889999999999999   99999999999          4899998754332     234566 889987

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=98.84  E-value=1.8e-09  Score=62.98  Aligned_cols=72  Identities=15%  Similarity=0.151  Sum_probs=48.7

Q ss_pred             eeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC------
Q 047898            7 VELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN------   80 (111)
Q Consensus         7 v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n------   80 (111)
                      +++.+++.. +...++.+++..+++.. +.       .  .....++.|++.|+.++|+.   +++|+|++|+|      
T Consensus       164 ~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~-------~--~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~~~  229 (282)
T 1zar_A          164 LAVPKVYAW-EGNAVLMELIDAKELYR-VR-------V--ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVSEE  229 (282)
T ss_dssp             SSSCCEEEE-ETTEEEEECCCCEEGGG-CC-------C--SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEETT
T ss_pred             CCcCeEEec-cceEEEEEecCCCcHHH-cc-------h--hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEECC
Confidence            556665543 22344445555444443 11       1  22346889999999999999   99999999999      


Q ss_pred             ---cCCCcccccCCC
Q 047898           81 ---IADFNLSNQAPN   92 (111)
Q Consensus        81 ---i~~~g~~~~~~~   92 (111)
                         ++|||.++....
T Consensus       230 ~vkl~DFG~a~~~~~  244 (282)
T 1zar_A          230 GIWIIDFPQSVEVGE  244 (282)
T ss_dssp             EEEECCCTTCEETTS
T ss_pred             cEEEEECCCCeECCC
Confidence               489998875543

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=98.48  E-value=2.5e-07  Score=53.34  Aligned_cols=42  Identities=17%  Similarity=0.252  Sum_probs=36.1

Q ss_pred             HHHHHHHHHHHHHHHHhh-hcCCCCeeecCCCCCC--------cCCCcccccCC
Q 047898           47 MTRVRIVVDALRGLEYLH-EKVQPSIIQRDIRSSN--------IADFNLSNQAP   91 (111)
Q Consensus        47 ~~~~~~~~~i~~~l~~lh-~~~~~~i~h~~l~~~n--------i~~~g~~~~~~   91 (111)
                      .....++.|++.++.++| +.   +++|+|++|.|        ++|||++....
T Consensus       170 ~~~~~i~~qi~~~l~~lH~~~---givHrDlkp~NILl~~~~~liDFG~a~~~~  220 (258)
T 1zth_A          170 LDVEGIFNDVVENVKRLYQEA---ELVHADLSEYNIMYIDKVYFIDMGQAVTLR  220 (258)
T ss_dssp             SCHHHHHHHHHHHHHHHHHTS---CEECSSCSTTSEEESSSEEECCCTTCEETT
T ss_pred             HHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEEcCcEEEEECcccccCC
Confidence            356778899999999999 88   99999999999        47899887553

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=97.71  E-value=4e-05  Score=46.93  Aligned_cols=30  Identities=20%  Similarity=0.267  Sum_probs=26.9

Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCc
Q 047898           49 RVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI   81 (111)
Q Consensus        49 ~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~ni   81 (111)
                      ...++.|++.++.++|..   +++|+|++|.||
T Consensus       207 ~~~l~~qll~~l~~lH~~---gIVHrDLKp~NI  236 (397)
T 4gyi_A          207 PASLYADLIALILRLAKH---GLIHGDFNEFNI  236 (397)
T ss_dssp             HHHHHHHHHHHHHHHHHT---TEECSCCSTTSE
T ss_pred             HHHHHHHHHHHHHHHHHC---CCcCCCCCHHHE
Confidence            345778999999999999   999999999994

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=95.99  E-value=0.0052  Score=35.17  Aligned_cols=54  Identities=11%  Similarity=0.132  Sum_probs=28.9

Q ss_pred             ccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhh
Q 047898            4 ENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHE   65 (111)
Q Consensus         4 ~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~   65 (111)
                      ..+.++++++...+....+++++....+.....        +......++.++..++..+|+
T Consensus        70 ~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~--------~~~~~~~~~~~l~~~l~~LH~  123 (263)
T 3tm0_A           70 LPVPKVLHFERHDGWSNLLMSEADGVLCSEEYE--------DEQSPEKIIELYAECIRLFHS  123 (263)
T ss_dssp             SCCCCEEEEEEETTEEEEEEECCSSEEHHHHCC--------TTTCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCeEEEEEecCCceEEEEEecCCeehhhccC--------CcccHHHHHHHHHHHHHHHhC
Confidence            456677777776554445555554333222110        011123456677777888887

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=95.94  E-value=0.028  Score=33.73  Aligned_cols=22  Identities=18%  Similarity=0.173  Sum_probs=18.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhh
Q 047898           44 LDWMTRVRIVVDALRGLEYLHE   65 (111)
Q Consensus        44 l~~~~~~~~~~~i~~~l~~lh~   65 (111)
                      ++..+...++.++...+..+|+
T Consensus       136 l~~~~~~~~~~~l~~~La~LH~  157 (359)
T 3dxp_A          136 MSPAERTAIYDEMNRVIAAMHT  157 (359)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHhC
Confidence            6677777888888889999987

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=90.14  E-value=0.4  Score=27.04  Aligned_cols=11  Identities=27%  Similarity=0.320  Sum_probs=10.0

Q ss_pred             eeecCCCCCCc
Q 047898           71 IIQRDIRSSNI   81 (111)
Q Consensus        71 i~h~~l~~~ni   81 (111)
                      ++|+|+++.||
T Consensus       186 l~HgDl~~~Ni  196 (264)
T 1nd4_A          186 VTHGDACLPNI  196 (264)
T ss_dssp             EECSSCCGGGE
T ss_pred             EECCCCCCCcE
Confidence            89999999993

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	111
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	4e-14
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	5e-14
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-13
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	1e-13
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	1e-13
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	3e-13
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	7e-13
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	1e-12
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	4e-12
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	1e-11
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-11
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	5e-11
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	8e-11
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	9e-11
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-10
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-10
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	3e-10
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	3e-10
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	5e-10
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	6e-10
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	1e-09
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-09
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	4e-09
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	6e-09
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	7e-09
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	7e-09
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-08
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	1e-08
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-08
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-08
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-08
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	3e-08
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	3e-08
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	5e-08
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	6e-08
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	8e-08
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	1e-07
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-07
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-07
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	5e-07
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	6e-07
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	6e-07
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	8e-07
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	1e-06
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-06
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	8e-06
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	1e-05
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	2e-05
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	3e-05
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	3e-05
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	7e-05
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	9e-05
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-04
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	2e-04
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	3e-04
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	3e-04
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	4e-04
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	5e-04
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	0.001
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	0.003

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.1 bits (155), Expect = 4e-14
 Identities = 25/128 (19%), Positives = 51/128 (39%), Gaps = 17/128 (13%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGL 60
           L+HEN++  +    + N     +W++        +        +     +++ +    GL
Sbjct: 54  LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGL 113

Query: 61  EYLHEKV-----QPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLH--STRVL 103
            +LH ++     +P+I  RD++S NI          AD  L+ +  +    +       +
Sbjct: 114 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV 173

Query: 104 GTFSYHAP 111
           GT  Y AP
Sbjct: 174 GTKRYMAP 181

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.4 bits (154), Expect = 5e-14
 Identities = 29/129 (22%), Positives = 50/129 (38%), Gaps = 32/129 (24%)

Query: 1   LKHENLVELLGYCVEGNL--------RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRI 52
            +H N++  +GY     L           L   +H+I  K            + +  + I
Sbjct: 61  TRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETK-----------FEMIKLIDI 109

Query: 53  VVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRV 102
                +G++YLH K   SII RD++S+NI           DF L+      +      ++
Sbjct: 110 ARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL 166

Query: 103 LGTFSYHAP 111
            G+  + AP
Sbjct: 167 SGSILWMAP 175

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.9 bits (152), Expect = 1e-13
 Identities = 27/141 (19%), Positives = 48/141 (34%), Gaps = 33/141 (23%)

Query: 1   LKHENLVELLGYCVE-------------GNLRDELI-------WIIHVITCKKGVQGAQP 40
             HEN+V LLG C               G+L + L                +K ++  + 
Sbjct: 98  GSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEED 157

Query: 41  SPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQA 90
             VL +   +       +G+E+L  K   S + RD+ + N+           DF L+   
Sbjct: 158 LNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLVTHGKVVKICDFGLARDI 214

Query: 91  PNMAARLHSTRVLGTFSYHAP 111
            + +  +          + AP
Sbjct: 215 MSDSNYVVRGNARLPVKWMAP 235

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.4 bits (151), Expect = 1e-13
 Identities = 21/121 (17%), Positives = 39/121 (32%), Gaps = 16/121 (13%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGL 60
           L+H+ LV L     +  +   +I                    L     + +      G+
Sbjct: 65  LQHQRLVRLYAVVTQEPIY--IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 122

Query: 61  EYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRVLGTFSYHA 110
            ++ E+   + I RD+R++NI          ADF L+    +               + A
Sbjct: 123 AFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT-AREGAKFPIKWTA 178

Query: 111 P 111
           P
Sbjct: 179 P 179

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.5 bits (151), Expect = 1e-13
 Identities = 28/135 (20%), Positives = 42/135 (31%), Gaps = 28/135 (20%)

Query: 2   KHENLVELLGYCVE-------------GNLRDELIWIIHVITCKKGVQG--AQPSPVLDW 46
            H N+V LLG C               G+L + L        C K            LD 
Sbjct: 85  NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144

Query: 47  MTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAAR 96
              +       +G+ +L  K   + I RD+ + NI           DF L+    N +  
Sbjct: 145 EDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 201

Query: 97  LHSTRVLGTFSYHAP 111
           +          + AP
Sbjct: 202 VVKGNARLPVKWMAP 216

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.6 bits (149), Expect = 3e-13
 Identities = 29/121 (23%), Positives = 44/121 (36%), Gaps = 16/121 (13%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGL 60
           L HEN+V+  G+  EGN        +   +  +     +P   +      R     + G+
Sbjct: 60  LNHENVVKFYGHRREGN---IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 116

Query: 61  EYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHA 110
            YLH      I  RDI+  N          I+DF L+             ++ GT  Y A
Sbjct: 117 VYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 173

Query: 111 P 111
           P
Sbjct: 174 P 174

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.4 bits (146), Expect = 7e-13
 Identities = 29/121 (23%), Positives = 43/121 (35%), Gaps = 20/121 (16%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGL 60
           L+H N++ L GY  +      +  I+         +  Q     D       + +    L
Sbjct: 63  LRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 119

Query: 61  EYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRVLGTFSYHA 110
            Y H K    +I RDI+  N+          ADF  S  AP+       T + GT  Y  
Sbjct: 120 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLP 172

Query: 111 P 111
           P
Sbjct: 173 P 173

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.7 bits (144), Expect = 1e-12
 Identities = 25/121 (20%), Positives = 45/121 (37%), Gaps = 19/121 (15%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGL 60
                +V   G         E+   +  +      Q  + +  +      ++ +  ++GL
Sbjct: 61  CNSPYIVGFYGAFYS---DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGL 117

Query: 61  EYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRVLGTFSYHA 110
            YL EK    I+ RD++ SNI           DF +S Q  +      +   +GT SY +
Sbjct: 118 TYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMS 171

Query: 111 P 111
           P
Sbjct: 172 P 172

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 58.5 bits (141), Expect = 4e-12
 Identities = 23/121 (19%), Positives = 42/121 (34%), Gaps = 22/121 (18%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGL 60
           L+H N ++  G  +  +       ++                 L  +    +   AL+GL
Sbjct: 72  LRHPNTIQYRGCYLREH---TAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGL 128

Query: 61  EYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRVLGTFSYHA 110
            YLH     ++I RD+++ NI           DF  ++              +GT  + A
Sbjct: 129 AYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA------NSFVGTPYWMA 179

Query: 111 P 111
           P
Sbjct: 180 P 180

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.3 bits (138), Expect = 1e-11
 Identities = 26/124 (20%), Positives = 44/124 (35%), Gaps = 19/124 (15%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGV--QGAQPSPVLDWMTRVRIVVDALR 58
           L+H N+V             + I ++  +    G      +   V+            L+
Sbjct: 65  LQHPNIVRFYDSWESTVKGKKCIVLVTEL-MTSGTLKTYLKRFKVMKIKVLRSWCRQILK 123

Query: 59  GLEYLHEKVQPSIIQRDIRSSNI-----------ADFNLSNQAPNMAARLHSTRVLGTFS 107
           GL++LH +  P II RD++  NI            D  L+           +  V+GT  
Sbjct: 124 GLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS----FAKAVIGTPE 178

Query: 108 YHAP 111
           + AP
Sbjct: 179 FMAP 182

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.3 bits (138), Expect = 1e-11
 Identities = 29/123 (23%), Positives = 44/123 (35%), Gaps = 21/123 (17%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWII--HVITCKKGVQGAQPSPVLDWMTRVRIVVDALR 58
             H N+V+LL         +  +WI+              +    L       +    L 
Sbjct: 66  CDHPNIVKLLDAFYY----ENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD 121

Query: 59  GLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRVLGTFSY 108
            L YLH+     II RD+++ NI          ADF +S +      R  S   +GT  +
Sbjct: 122 ALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS--FIGTPYW 176

Query: 109 HAP 111
            AP
Sbjct: 177 MAP 179

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.6 bits (133), Expect = 5e-11
 Identities = 16/121 (13%), Positives = 40/121 (33%), Gaps = 16/121 (13%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGL 60
           + + ++  LLG C+   ++   +    +          +    +     +   V   +G+
Sbjct: 68  VDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 124

Query: 61  EYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRVLGTFSYHA 110
            YL ++    ++ RD+ + N+           DF L+          H+        + A
Sbjct: 125 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 181

Query: 111 P 111
            
Sbjct: 182 L 182

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.6 bits (131), Expect = 8e-11
 Identities = 24/116 (20%), Positives = 42/116 (36%), Gaps = 8/116 (6%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGL 60
           L+H NLV+LLG  VE      ++              ++   VL     ++  +D    +
Sbjct: 57  LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 116

Query: 61  EYLHEKVQPSIIQRDIRSSNI---ADFNLSNQAPNMAARLHSTR--VLGTFSYHAP 111
           EYL      + + RD+ + N+    D         +     ST+        + AP
Sbjct: 117 EYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAP 169

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.6 bits (131), Expect = 9e-11
 Identities = 25/121 (20%), Positives = 45/121 (37%), Gaps = 19/121 (15%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGL 60
            K+ N+V  L   +      + +W++        +        +D      +  + L+ L
Sbjct: 74  NKNPNIVNYLDSYLV----GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQAL 129

Query: 61  EYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRVLGTFSYHA 110
           E+LH      +I RDI+S NI           DF    Q      +   + ++GT  + A
Sbjct: 130 EFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE--QSKRSTMVGTPYWMA 184

Query: 111 P 111
           P
Sbjct: 185 P 185

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.1 bits (129), Expect = 2e-10
 Identities = 29/124 (23%), Positives = 44/124 (35%), Gaps = 19/124 (15%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKG---VQGAQPSPVLDWMTRVRIVVDAL 57
            +H N+V L   C       E    +      +         P P +   T   ++   L
Sbjct: 67  FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLL 126

Query: 58  RGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRVLGTFS 107
           RGL++LH      ++ RD++  NI          ADF L+            T V+ T  
Sbjct: 127 RGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM---ALTSVVVTLW 180

Query: 108 YHAP 111
           Y AP
Sbjct: 181 YRAP 184

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 54.1 bits (129), Expect = 2e-10
 Identities = 21/118 (17%), Positives = 34/118 (28%), Gaps = 21/118 (17%)

Query: 12  YCVEGNLRDEL--------IWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYL 63
           Y   G+L + L          + H     +    +   P L    ++ I      G+ YL
Sbjct: 97  YMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYL 156

Query: 64  HEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP 111
            E      + RD+ + N           ADF LS    +               +  P
Sbjct: 157 SE---RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPP 211

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.3 bits (127), Expect = 3e-10
 Identities = 26/133 (19%), Positives = 39/133 (29%), Gaps = 27/133 (20%)

Query: 3   HENLVELLGYCVE--------------GNLRDELIWIIHVITCKKGVQGAQPSPVLDWMT 48
           H N+V LLG C +              GNL   L    +     K          L    
Sbjct: 76  HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 135

Query: 49  RVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLH 98
            +       +G+E+L  +     I RD+ + NI           DF L+         + 
Sbjct: 136 LICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 192

Query: 99  STRVLGTFSYHAP 111
                    + AP
Sbjct: 193 KGDARLPLKWMAP 205

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.2 bits (127), Expect = 3e-10
 Identities = 25/123 (20%), Positives = 39/123 (31%), Gaps = 20/123 (16%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQG--AQPSPVLDWMTRVRIVVDALR 58
           L HE LV+L G C +       I+II        +     +          + +  D   
Sbjct: 56  LSHEKLVQLYGVCTK----QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE 111

Query: 59  GLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRVLGTFSY 108
            +EYL  K     + RD+ + N           +DF LS    +      S        +
Sbjct: 112 AMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT-SSVGSKFPVRW 167

Query: 109 HAP 111
             P
Sbjct: 168 SPP 170

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.4 bits (125), Expect = 5e-10
 Identities = 21/130 (16%), Positives = 41/130 (31%), Gaps = 33/130 (25%)

Query: 1   LKHENLVELLGYCVEGNL--------RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRI 52
           L +  +V L+G C    L           L   +                 +       +
Sbjct: 66  LDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLV-----------GKREEIPVSNVAEL 114

Query: 53  VVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQA-PNMAARLHSTR 101
           +     G++YL EK   + + RD+ + N+          +DF LS     + +     + 
Sbjct: 115 LHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA 171

Query: 102 VLGTFSYHAP 111
                 ++AP
Sbjct: 172 GKWPLKWYAP 181

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.5 bits (125), Expect = 6e-10
 Identities = 31/133 (23%), Positives = 43/133 (32%), Gaps = 29/133 (21%)

Query: 2   KHENLVELLG-------------YCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMT 48
            H N++ LLG             Y   GNL D L     + T          +  L    
Sbjct: 69  HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 128

Query: 49  RVRIVVDALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLH 98
            +    D  RG++YL +K     I RD+ + NI          ADF LS         + 
Sbjct: 129 LLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRGQEVY---VK 182

Query: 99  STRVLGTFSYHAP 111
            T       + A 
Sbjct: 183 KTMGRLPVRWMAI 195

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.6 bits (123), Expect = 1e-09
 Identities = 21/122 (17%), Positives = 45/122 (36%), Gaps = 18/122 (14%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGL 60
           L +  +V ++G C      +  + ++ +       +  Q +  +     + +V     G+
Sbjct: 65  LDNPYIVRMIGICE----AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGM 120

Query: 61  EYLHEKVQPSIIQRDIRSSN----------IADFNLSNQ-APNMAARLHSTRVLGTFSYH 109
           +YL E    + + RD+ + N          I+DF LS     +       T       ++
Sbjct: 121 KYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 177

Query: 110 AP 111
           AP
Sbjct: 178 AP 179

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.1 bits (122), Expect = 2e-09
 Identities = 24/129 (18%), Positives = 52/129 (40%), Gaps = 23/129 (17%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKG------VQGAQPSPVLDWMTRVRIVV 54
           LKH N+V      ++    +  ++I+    C+ G       +G +    LD    +R++ 
Sbjct: 60  LKHPNIVRYYDRIIDRT--NTTLYIVMEY-CEGGDLASVITKGTKERQYLDEEFVLRVMT 116

Query: 55  DALRGLEYLHEK--VQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRV 102
                L+  H +     +++ RD++ +N+           DF L+    +  +   +   
Sbjct: 117 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS--FAKAF 174

Query: 103 LGTFSYHAP 111
           +GT  Y +P
Sbjct: 175 VGTPYYMSP 183

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (119), Expect = 4e-09
 Identities = 25/122 (20%), Positives = 44/122 (36%), Gaps = 14/122 (11%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGL 60
            +HEN++ +        +       +        +     +  L        +   LRGL
Sbjct: 63  FRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGL 122

Query: 61  EYLHEKVQPSIIQRDIRSSN----------IADFNLSNQA-PNMAARLHSTRVLGTFSYH 109
           +Y+H     +++ RD++ SN          I DF L+  A P+       T  + T  Y 
Sbjct: 123 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 179

Query: 110 AP 111
           AP
Sbjct: 180 AP 181

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.5 bits (117), Expect = 6e-09
 Identities = 33/133 (24%), Positives = 46/133 (34%), Gaps = 26/133 (19%)

Query: 2   KHENLVELLG-------------YCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMT 48
           KH+N++ LLG             Y  +GNLR+ L                 P   L    
Sbjct: 77  KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 136

Query: 49  RVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLH 98
            V       RG+EYL  K     I RD+ + N          IADF L+    ++     
Sbjct: 137 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 193

Query: 99  STRVLGTFSYHAP 111
           +T       + AP
Sbjct: 194 TTNGRLPVKWMAP 206

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.4 bits (117), Expect = 7e-09
 Identities = 21/120 (17%), Positives = 38/120 (31%), Gaps = 17/120 (14%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGL 60
             H ++V+L+G   E  +    I +      +           LD  + +         L
Sbjct: 65  FDHPHIVKLIGVITENPV---WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 121

Query: 61  EYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRVLGTFSYHA 110
            YL  K     + RDI + N+           DF LS    +      +++      + A
Sbjct: 122 AYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY-KASKGKLPIKWMA 177

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.4 bits (117), Expect = 7e-09
 Identities = 25/122 (20%), Positives = 39/122 (31%), Gaps = 17/122 (13%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGL 60
           L H NL+ L G  +   ++   +            +  +        T  R  V    G+
Sbjct: 68  LDHRNLIRLYGVVLTPPMK---MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGM 124

Query: 61  EYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAP-NMAARLHSTRVLGTFSYH 109
            YL  K     I RD+ + N+           DF L    P N    +        F++ 
Sbjct: 125 GYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 181

Query: 110 AP 111
           AP
Sbjct: 182 AP 183

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.5 bits (115), Expect = 1e-08
 Identities = 23/121 (19%), Positives = 43/121 (35%), Gaps = 16/121 (13%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGL 60
           L H   V+L     +    ++L + +      + ++  +     D         + +  L
Sbjct: 65  LDHPFFVKLYFTFQDD---EKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 121

Query: 61  EYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRVLGTFSYHA 110
           EYLH      II RD++  NI           DF  +      + +  +   +GT  Y +
Sbjct: 122 EYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVS 178

Query: 111 P 111
           P
Sbjct: 179 P 179

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 48.6 bits (115), Expect = 1e-08
 Identities = 22/123 (17%), Positives = 44/123 (35%), Gaps = 15/123 (12%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWII-HVITCKKGVQGAQPSPVLDWMTRVRIVVDALRG 59
           L H  +V +            L +I+   +              +     + ++ DA + 
Sbjct: 64  LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 123

Query: 60  LEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHST-RVLGTFSY 108
           L + H+     II RD++ +N          + DF ++    +    +  T  V+GT  Y
Sbjct: 124 LNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 180

Query: 109 HAP 111
            +P
Sbjct: 181 LSP 183

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.2 bits (114), Expect = 2e-08
 Identities = 16/87 (18%), Positives = 32/87 (36%), Gaps = 9/87 (10%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVI------TCKKGVQGAQPSPVLDWMTRVRIVV 54
           L H N+V L  +      + + +++  V+        +     ++    L  +     + 
Sbjct: 70  LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129

Query: 55  DALRGLEYLHEKVQPSIIQRDIRSSNI 81
              R L Y+H      I  RDI+  N+
Sbjct: 130 QLFRSLAYIHSF---GICHRDIKPQNL 153

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.8 bits (113), Expect = 2e-08
 Identities = 23/124 (18%), Positives = 41/124 (33%), Gaps = 18/124 (14%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGL 60
             H N++ L G   +      +I    +          Q       +  V ++     G+
Sbjct: 84  FDHPNVIHLEGVVTKSTPV--MIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGM 141

Query: 61  EYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRVLG---TFS 107
           +YL      + + RD+ + NI          +DF LS    +  +    T  LG      
Sbjct: 142 KYLA---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIR 198

Query: 108 YHAP 111
           + AP
Sbjct: 199 WTAP 202

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.8 bits (113), Expect = 3e-08
 Identities = 25/121 (20%), Positives = 41/121 (33%), Gaps = 15/121 (12%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGL 60
           +KH NLV+LLG C        +   +        ++       +  +  + +       +
Sbjct: 70  IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VSAVVLLYMATQISSAM 128

Query: 61  EYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRVLGTFSYHA 110
           EYL +K   + I RD+ + N           ADF LS          H         + A
Sbjct: 129 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH-AGAKFPIKWTA 184

Query: 111 P 111
           P
Sbjct: 185 P 185

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.8 bits (113), Expect = 3e-08
 Identities = 22/116 (18%), Positives = 42/116 (36%), Gaps = 11/116 (9%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGL 60
           + H  ++ + G   +     ++  I+  I   +     + S             +    L
Sbjct: 61  VTHPFIIRMWGTFQDA---QQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLAL 117

Query: 61  EYLHEKVQPSIIQRDIRSSNI---ADFN--LSNQAPNMAARLHSTRVLGTFSYHAP 111
           EYLH K    II RD++  NI    + +  +++          +  + GT  Y AP
Sbjct: 118 EYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAP 170

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.4 bits (112), Expect = 3e-08
 Identities = 24/123 (19%), Positives = 43/123 (34%), Gaps = 20/123 (16%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQ--GAQPSPVLDWMTRVRIVVDALR 58
           L H  LV+L G C+E       I ++        +         +    T + + +D   
Sbjct: 57  LSHPKLVQLYGVCLE----QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 112

Query: 59  GLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRVLGTFSY 108
           G+ YL E     +I RD+ + N           +DF ++    +      ST       +
Sbjct: 113 GMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-SSTGTKFPVKW 168

Query: 109 HAP 111
            +P
Sbjct: 169 ASP 171

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.0 bits (111), Expect = 5e-08
 Identities = 22/121 (18%), Positives = 40/121 (33%), Gaps = 16/121 (13%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGL 60
           L+HE LV+L     E  +   ++               +    L     V +      G+
Sbjct: 69  LRHEKLVQLYAVVSEEPIY--IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGM 126

Query: 61  EYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRVLGTFSYHA 110
            Y+    + + + RD+R++NI          ADF L+    +               + A
Sbjct: 127 AYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTA 182

Query: 111 P 111
           P
Sbjct: 183 P 183

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.8 bits (110), Expect = 6e-08
 Identities = 20/122 (16%), Positives = 41/122 (33%), Gaps = 16/122 (13%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGL 60
             H N++ L G   +      +I   ++          +       +  V ++     G+
Sbjct: 66  FSHHNIIRLEGVISKYKPM--MIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGM 123

Query: 61  EYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHST-RVLGTFSYH 109
           +YL      + + RD+ + NI          +DF LS    +     ++T        + 
Sbjct: 124 KYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWT 180

Query: 110 AP 111
           AP
Sbjct: 181 AP 182

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.3 bits (109), Expect = 8e-08
 Identities = 17/123 (13%), Positives = 38/123 (30%), Gaps = 16/123 (13%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGL 60
             H N++ LLG C+       ++         +     +          +   +   +G+
Sbjct: 85  FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-PTVKDLIGFGLQVAKGM 143

Query: 61  EYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPN--MAARLHSTRVLGTFSY 108
           ++L        + RD+ + N           ADF L+    +    +  + T       +
Sbjct: 144 KFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 200

Query: 109 HAP 111
            A 
Sbjct: 201 MAL 203

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.0 bits (108), Expect = 1e-07
 Identities = 17/130 (13%), Positives = 39/130 (30%), Gaps = 24/130 (18%)

Query: 1   LKHENLVELLGYCVEGNLRD---------ELIWIIHVITCKKGVQGAQPSPVLDWMTRVR 51
               ++V LLG   +G             +L   +   + +  +              ++
Sbjct: 80  FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR--SLRPAMANNPVLAPPSLSKMIQ 137

Query: 52  IVVDALRGLEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTR 101
           +  +   G+ YL+       + RD+ + N          I DF ++             +
Sbjct: 138 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 194

Query: 102 VLGTFSYHAP 111
            L    + +P
Sbjct: 195 GLLPVRWMSP 204

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 46.0 bits (108), Expect = 1e-07
 Identities = 18/129 (13%), Positives = 42/129 (32%), Gaps = 23/129 (17%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGL 60
           ++    +  + +C      D  + ++ ++           S      T + +    +  +
Sbjct: 59  MQGGVGIPTIRWCGAEG--DYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRI 116

Query: 61  EYLHEKVQPSIIQRDIRSSNI-------------ADFNLSNQAPN-----MAARLHSTRV 102
           EY+H K   + I RD++  N               DF L+ +  +           +  +
Sbjct: 117 EYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNL 173

Query: 103 LGTFSYHAP 111
            GT  Y + 
Sbjct: 174 TGTARYASI 182

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.5 bits (107), Expect = 1e-07
 Identities = 25/123 (20%), Positives = 39/123 (31%), Gaps = 22/123 (17%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKG--VQGAQPSPVLDWMTRVRIVVDALR 58
            +H  L  +                  +     G  +   Q     D         + + 
Sbjct: 60  WEHPFLTHMFCTFQTKE-----NLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIIL 114

Query: 59  GLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRVLGTFSY 108
           GL++LH K    I+ RD++  NI          ADF +  +  NM     +    GT  Y
Sbjct: 115 GLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKE--NMLGDAKTNTFCGTPDY 169

Query: 109 HAP 111
            AP
Sbjct: 170 IAP 172

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 44.3 bits (104), Expect = 5e-07
 Identities = 24/133 (18%), Positives = 41/133 (30%), Gaps = 40/133 (30%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWII----------HVITCKKGVQGAQPSPVLDWMTRV 50
           L H  L+ L     +       + +I            I  +           +     +
Sbjct: 83  LHHPKLINLHDAFED----KYEMVLILEFLSGGELFDRIAAEDYK--------MSEAEVI 130

Query: 51  RIVVDALRGLEYLHEKVQPSIIQRDIRSSNI------------ADFNLSNQAPNMAARLH 98
             +  A  GL+++HE    SI+  DI+  NI             DF L+ +         
Sbjct: 131 NYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKV 187

Query: 99  STRVLGTFSYHAP 111
           +T    T  + AP
Sbjct: 188 TT---ATAEFAAP 197

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (103), Expect = 6e-07
 Identities = 29/121 (23%), Positives = 47/121 (38%), Gaps = 18/121 (14%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGL 60
           L H N++ LL        +  +  +   +     V     S VL        ++  L+GL
Sbjct: 57  LSHPNIIGLLDAFGH---KSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGL 113

Query: 61  EYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRVLGTFSYHA 110
           EYLH+     I+ RD++ +N+          ADF L+    +       T  + T  Y A
Sbjct: 114 EYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGS--PNRAYTHQVVTRWYRA 168

Query: 111 P 111
           P
Sbjct: 169 P 169

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 43.9 bits (103), Expect = 6e-07
 Identities = 23/133 (17%), Positives = 42/133 (31%), Gaps = 40/133 (30%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWII----------HVITCKKGVQGAQPSPVLDWMTRV 50
           L+H  LV L     +    D  + +I            +  +           +     V
Sbjct: 80  LRHPTLVNLHDAFED----DNEMVMIYEFMSGGELFEKVADEHNK--------MSEDEAV 127

Query: 51  RIVVDALRGLEYLHEKVQPSIIQRDIRSSNI------------ADFNLSNQAPNMAARLH 98
             +    +GL ++HE    + +  D++  NI             DF L+       +   
Sbjct: 128 EYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV 184

Query: 99  STRVLGTFSYHAP 111
           +T   GT  + AP
Sbjct: 185 TT---GTAEFAAP 194

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (102), Expect = 8e-07
 Identities = 11/85 (12%), Positives = 27/85 (31%), Gaps = 8/85 (9%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKG----VQGAQPSPVLDWMTRVRIVVDA 56
            +  ++V ++          + + I+       G        +            I+   
Sbjct: 62  SQCPHIVRIVDVYENLYAGRKCLLIVMEC-LDGGELFSRIQDRGDQAFTEREASEIMKSI 120

Query: 57  LRGLEYLHEKVQPSIIQRDIRSSNI 81
              ++YLH     +I  RD++  N+
Sbjct: 121 GEAIQYLHSI---NIAHRDVKPENL 142

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 43.2 bits (101), Expect = 1e-06
 Identities = 19/120 (15%), Positives = 39/120 (32%), Gaps = 20/120 (16%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGL 60
                +V +          D+L +I+ ++             V           + + GL
Sbjct: 64  GDCPFIVCMSYAFHTP---DKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 120

Query: 61  EYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRVLGTFSYHA 110
           E++H +    ++ RD++ +NI          +D  L+               +GT  Y A
Sbjct: 121 EHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKK----KPHASVGTHGYMA 173

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.4 bits (99), Expect = 2e-06
 Identities = 22/125 (17%), Positives = 42/125 (33%), Gaps = 23/125 (18%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGL 60
           ++H N++ L         + ++I I+ ++   +          L        +   L G+
Sbjct: 70  IQHPNVITLHEVYEN---KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 126

Query: 61  EYLHEKVQPSIIQRDIRSSNI--------------ADFNLSNQAPNMAARLHSTRVLGTF 106
            YLH      I   D++  NI               DF L+++            + GT 
Sbjct: 127 YYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTP 180

Query: 107 SYHAP 111
            + AP
Sbjct: 181 EFVAP 185

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 40.6 bits (94), Expect = 8e-06
 Identities = 20/131 (15%), Positives = 40/131 (30%), Gaps = 25/131 (19%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGL 60
           L     +  + Y  +  L + L+  +   + +  +            T        L  +
Sbjct: 57  LAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLD--LCGRKFSVKTVAMAAKQMLARV 114

Query: 61  EYLHEKVQPSIIQRDIRSSNI---------------ADFNLSNQAPNMAARLH-----ST 100
           + +HEK   S++ RDI+  N                 DF +     +   + H       
Sbjct: 115 QSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKK 171

Query: 101 RVLGTFSYHAP 111
            + GT  Y + 
Sbjct: 172 NLSGTARYMSI 182

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (93), Expect = 1e-05
 Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 4/82 (4%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVI-TCKKGVQGAQPSPVLDWMTRVRIVVDALRG 59
           ++HEN++ LL         D+      V+      +        L       +V   L+G
Sbjct: 74  MRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKG 133

Query: 60  LEYLHEKVQPSIIQRDIRSSNI 81
           L Y+H      II RD++  N+
Sbjct: 134 LRYIHAA---GIIHRDLKPGNL 152

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.8 bits (92), Expect = 2e-05
 Identities = 11/81 (13%), Positives = 25/81 (30%), Gaps = 6/81 (7%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGL 60
           +    LV+L     + +    ++  +        ++                    +   
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR---FSEPHARFYAAQIVLTF 154

Query: 61  EYLHEKVQPSIIQRDIRSSNI 81
           EYLH      +I RD++  N+
Sbjct: 155 EYLHSL---DLIYRDLKPENL 172

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.9 bits (90), Expect = 3e-05
 Identities = 19/87 (21%), Positives = 27/87 (31%), Gaps = 17/87 (19%)

Query: 1   LKHENLVELLGYCVEGN---LRDELIW---IIHVITCKKGVQGAQPSPVLDWMTRVRIVV 54
            +H N++ L           +  E I    I   I              L+    V  V 
Sbjct: 58  ARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFE--------LNEREIVSYVH 109

Query: 55  DALRGLEYLHEKVQPSIIQRDIRSSNI 81
                L++LH     +I   DIR  NI
Sbjct: 110 QVCEALQFLHSH---NIGHFDIRPENI 133

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.9 bits (90), Expect = 3e-05
 Identities = 17/121 (14%), Positives = 31/121 (25%), Gaps = 20/121 (16%)

Query: 2   KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLE 61
               ++ LL +    +    ++ +      +           L            L  + 
Sbjct: 67  GFSGVIRLLDWFERPDSF--VLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124

Query: 62  YLHEKVQPSIIQRDIRSSNI-----------ADFNLSNQAPNMAARLHSTRVLGTFSYHA 110
           + H      ++ RDI+  NI            DF       +       T   GT  Y  
Sbjct: 125 HCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSP 177

Query: 111 P 111
           P
Sbjct: 178 P 178

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.3 bits (88), Expect = 7e-05
 Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 4/82 (4%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKG-VQGAQPSPVLDWMTRVRIVVDALRG 59
           +KHEN++ LL         +E   +  V       +        L       ++   LRG
Sbjct: 74  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 133

Query: 60  LEYLHEKVQPSIIQRDIRSSNI 81
           L+Y+H      II RD++ SN+
Sbjct: 134 LKYIHSA---DIIHRDLKPSNL 152

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (87), Expect = 9e-05
 Identities = 24/121 (19%), Positives = 39/121 (32%), Gaps = 18/121 (14%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGL 60
            +H  L  L          D L +++      +         V           + +  L
Sbjct: 62  TRHPFLTALKYAFQTH---DRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSAL 118

Query: 61  EYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRVLGTFSYHA 110
           EYLH +    ++ RDI+  N+           DF L  +  +  A +      GT  Y A
Sbjct: 119 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK--TFCGTPEYLA 173

Query: 111 P 111
           P
Sbjct: 174 P 174

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 37.7 bits (87), Expect = 1e-04
 Identities = 25/110 (22%), Positives = 34/110 (30%), Gaps = 32/110 (29%)

Query: 12  YCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSI 71
              +G L D L                     L      +I+   L  +  LH+    +I
Sbjct: 91  LMKKGELFDYL----------------TEKVTLSEKETRKIMRALLEVICALHKL---NI 131

Query: 72  IQRDIRSSNI----------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP 111
           + RD++  NI           DF  S Q            V GT SY AP
Sbjct: 132 VHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE---KLREVCGTPSYLAP 178

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 36.8 bits (84), Expect = 2e-04
 Identities = 21/110 (19%), Positives = 39/110 (35%), Gaps = 16/110 (14%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGL 60
           LKH N+V+L            L+ +   +              L+ +T    ++  L G+
Sbjct: 57  LKHSNIVKLYDVIHTKK---RLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGI 113

Query: 61  EYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHST 100
            Y H++    ++ RD++  N          IADF L+        +    
Sbjct: 114 AYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE 160

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.4 bits (83), Expect = 3e-04
 Identities = 28/125 (22%), Positives = 48/125 (38%), Gaps = 20/125 (16%)

Query: 1   LKHENLVELLGYCVEGN---LRDELIWIIHVITCKKGVQGAQPSPV--LDWMTRVRIVVD 55
           LKHEN+V L+  C        R +    +    C+  + G   + +         R++  
Sbjct: 66  LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQM 125

Query: 56  ALRGLEYLHEKVQPSIIQRDIRSSNI----------ADFNLSNQ--APNMAARLHSTRVL 103
            L GL Y+H      I+ RD++++N+          ADF L+        +     T  +
Sbjct: 126 LLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRV 182

Query: 104 GTFSY 108
            T  Y
Sbjct: 183 VTLWY 187

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (82), Expect = 3e-04
 Identities = 16/81 (19%), Positives = 31/81 (38%), Gaps = 6/81 (7%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGL 60
           LKH+N+V L           +L  +               +  LD       +   L+GL
Sbjct: 58  LKHKNIVRLHDVLHSDK---KLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGL 114

Query: 61  EYLHEKVQPSIIQRDIRSSNI 81
            + H +   +++ RD++  N+
Sbjct: 115 GFCHSR---NVLHRDLKPQNL 132

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 35.8 bits (82), Expect = 4e-04
 Identities = 27/124 (21%), Positives = 45/124 (36%), Gaps = 22/124 (17%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGL 60
           +KH N+V L      G     L  I+ +++  +                 R++   L  +
Sbjct: 64  IKHPNIVALDDIYESGG---HLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAV 120

Query: 61  EYLHEKVQPSIIQRDIRSSN-------------IADFNLSNQAPNMAARLHSTRVLGTFS 107
           +YLH+     I+ RD++  N             I+DF LS      +     +   GT  
Sbjct: 121 KYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVL---STACGTPG 174

Query: 108 YHAP 111
           Y AP
Sbjct: 175 YVAP 178

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.6 bits (81), Expect = 5e-04
 Identities = 16/81 (19%), Positives = 29/81 (35%), Gaps = 5/81 (6%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGL 60
           L H N+V+LL      N     +    +    K    A     +        +   L+GL
Sbjct: 58  LNHPNIVKLLDVIHTEN--KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 115

Query: 61  EYLHEKVQPSIIQRDIRSSNI 81
            + H      ++ RD++  N+
Sbjct: 116 AFCHSHR---VLHRDLKPQNL 133

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 34.8 bits (79), Expect = 0.001
 Identities = 17/120 (14%), Positives = 33/120 (27%), Gaps = 21/120 (17%)

Query: 3   HENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEY 62
             N++ L     +   R        V          Q    L        + + L+ L+Y
Sbjct: 89  GPNIITLADIVKDPVSR----TPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDY 144

Query: 63  LHEKVQPSIIQRDIRSSNI-----------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP 111
            H      I+ RD++  N+            D+ L+               + +  +  P
Sbjct: 145 CHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF---YHPGQEYNVRVASRYFKGP 198

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 33.5 bits (75), Expect = 0.003
 Identities = 13/83 (15%), Positives = 33/83 (39%), Gaps = 4/83 (4%)

Query: 1   LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQG--AQPSPVLDWMTRVRIVVDALR 58
           +   ++++LL +          + ++  +  +  +          +  +   +I    L 
Sbjct: 77  MGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLL 136

Query: 59  GLEYLHEKVQPSIIQRDIRSSNI 81
           GL+Y+H +    II  DI+  N+
Sbjct: 137 GLDYMHRR--CGIIHTDIKPENV 157

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	111
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.93
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.91
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.9
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.9
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.9
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.9
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.9
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.9
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.9
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.9
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.9
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.89
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.89
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.89
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.89
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.89
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.89
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.88
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.88
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.88
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.88
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.88
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.88
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.87
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.87
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.87
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.87
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.87
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.87
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.86
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.86
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.86
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.85
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.84
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.84
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.84
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.84
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.84
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.84
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.84
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.84
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.84
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.83
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.82
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.82
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.81
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.81
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.81
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.8
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.79
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.79
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.79
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.76
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.76
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.75
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.74
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.73
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.72
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.7
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.68
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.68
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.48
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.04

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.8e-26  Score=132.37  Aligned_cols=105  Identities=27%  Similarity=0.341  Sum_probs=85.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||++++++.+.+...++.+++..+++...+..   ...+++.++..++.|++.|+.|+|++   +++|||+||+|
T Consensus        60 l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~l~~---~~~l~e~~~~~i~~qi~~al~ylH~~---~IiHrDiKp~N  133 (271)
T d1nvra_          60 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPEN  133 (271)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBT---TTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGG
T ss_pred             CCCCCEeeEeeeeccCceeEEEEeccCCCcHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHc---CCccCcccHHH
Confidence            5899999999999998776677777777666655543   33489999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++............+.+||+.||||
T Consensus       134 ILl~~~~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~AP  174 (271)
T d1nvra_         134 LLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP  174 (271)
T ss_dssp             EEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGSCT
T ss_pred             EEECCCCCEEEccchhheeeccCCccccccceeeCcCccCH
Confidence                      4899999876544332224557899999998

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.6e-25  Score=128.70  Aligned_cols=105  Identities=23%  Similarity=0.401  Sum_probs=76.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||++++++.++. ..++.++++.+++...+....  ..+++.++..++.|++.|+.|+|++   +++|||+||+|
T Consensus        61 l~HpnIv~~~~~~~~~~-~~lv~Ey~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~gl~yLH~~---~ivHrDlKp~N  134 (276)
T d1uwha_          61 TRHVNILLFMGYSTAPQ-LAIVTQWCEGSSLYHHLHIIE--TKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNN  134 (276)
T ss_dssp             CCCTTBCCEEEEECSSS-CEEEEECCCEEEHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGG
T ss_pred             CCCCCEeeeeEEEeccE-EEEEEecCCCCCHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHhcC---CEeccccCHHH
Confidence            58999999999986543 455667777666655554322  2389999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++............+..||+.||||
T Consensus       135 iLl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~AP  175 (276)
T d1uwha_         135 IFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP  175 (276)
T ss_dssp             EEEETTSSEEECCCCCSCC------------CCCCGGGCCH
T ss_pred             EEEcCCCCEEEccccceeeccccCCcccccccccCcccCCH
Confidence                      4999999876543332223456799999998

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.5e-25  Score=129.50  Aligned_cols=104  Identities=27%  Similarity=0.304  Sum_probs=82.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||++++++.+.+...++++++..+++...+...  ...+++.++..++.|++.|+.|+|++   +++|||+||+|
T Consensus        66 l~HpnIv~l~~~~~~~~~~~lvmEy~~~g~L~~~~~~~--~~~l~e~~~~~i~~qi~~gL~ylH~~---~ivHrDiKp~N  140 (288)
T d2jfla1          66 CDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL--ERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGN  140 (288)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred             CCCCCCCeEEEEEeeCCeEEEEEecCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CEEEeecChhh
Confidence            68999999999999988777777777766655443321  22389999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++........  ..+..||+.||||
T Consensus       141 Ill~~~~~~Kl~DFG~a~~~~~~~~~--~~~~~Gt~~y~AP  179 (288)
T d2jfla1         141 ILFTLDGDIKLADFGVSAKNTRTIQR--RDSFIGTPYWMAP  179 (288)
T ss_dssp             EEECTTSCEEECCCTTCEECHHHHHH--HTCCCSCCTTCCH
T ss_pred             eeECCCCCEEEEechhhhccCCCccc--ccccccccccCCH
Confidence                      4899998755333221  3456899999998

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=4.2e-25  Score=126.22  Aligned_cols=101  Identities=30%  Similarity=0.454  Sum_probs=81.8

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||++++++.+.+...++.+++..+++...+..   ...+++.++..++.|++.|+.|+|++   +++|||+||+|
T Consensus        63 l~hpnIv~~~~~~~~~~~~~ivmEy~~~g~L~~~l~~---~~~l~e~~~~~i~~qi~~al~~lH~~---~ivHrDiKp~N  136 (263)
T d2j4za1          63 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK---LSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPEN  136 (263)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGG
T ss_pred             cCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHC---Ceeeeeecccc
Confidence            5899999999999987776667777776665444432   23389999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||++.......    .....||+.||||
T Consensus       137 ill~~~~~~kl~DFG~a~~~~~~~----~~~~~Gt~~Y~AP  173 (263)
T d2j4za1         137 LLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDYLPP  173 (263)
T ss_dssp             EEECTTSCEEECCCCSCSCCCCCC----CEETTEEGGGCCH
T ss_pred             ceecCCCCEeecccceeeecCCCc----ccccCCCCcccCH
Confidence                      48999997654432    2346799999998

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=7.2e-25  Score=128.48  Aligned_cols=107  Identities=22%  Similarity=0.287  Sum_probs=83.7

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCC--------------------CCCCCCHHHHHHHHHHHHHHHH
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQ--------------------PSPVLDWMTRVRIVVDALRGLE   61 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~l~~~~~~~~~~~i~~~l~   61 (111)
                      +|||||+++++|.+.+...++.++++.+++...+....                    ....+++.++..++.|++.|+.
T Consensus        99 ~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~  178 (325)
T d1rjba_          99 SHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGME  178 (325)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHH
T ss_pred             CCCcEeEEEEEEeeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHH
Confidence            79999999999998887777778888776655543321                    1223788999999999999999


Q ss_pred             HhhhcCCCCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           62 YLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        62 ~lh~~~~~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |||++   +++||||||+|          |+|||+++............+..||+.||||
T Consensus       179 yLH~~---~IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aP  235 (325)
T d1rjba_         179 FLEFK---SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAP  235 (325)
T ss_dssp             HHHHT---TEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCH
T ss_pred             HHHhC---CeeeccCchhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCCh
Confidence            99999   99999999999          4899999876554433223455689999998

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=4.4e-25  Score=127.50  Aligned_cols=105  Identities=23%  Similarity=0.247  Sum_probs=79.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||++++++.+.+...++.+++..+++......   ...+++.++..++.|++.|+.|+|++   +++|||+||+|
T Consensus        65 l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~~~~---~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~N  138 (288)
T d1uu3a_          65 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPEN  138 (288)
T ss_dssp             CCSTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred             cCCCCeeEEEEEEEECCEEEEEEEccCCCCHHHhhhc---cCCCCHHHHHHHHHHHHHHHHhhccc---cEEcCcCCccc
Confidence            5899999999999987766666677766655443332   23389999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++.+..........+.+||+.||||
T Consensus       139 Ill~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~AP  179 (288)
T d1uu3a_         139 ILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP  179 (288)
T ss_dssp             EEECTTSCEEECCCTTCEECC----------CCCCGGGCCH
T ss_pred             cccCCCceEEecccccceecccCCcccccccccCCccccCc
Confidence                      4899999876544332224456899999998

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.2e-24  Score=125.98  Aligned_cols=102  Identities=25%  Similarity=0.352  Sum_probs=82.8

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||++++++.+.+...++.+++..+++.....    ...+++.++..++.|++.|+.|+|++   +++|||+||+|
T Consensus        74 l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~~~----~~~l~~~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~N  146 (293)
T d1yhwa1          74 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT----ETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDN  146 (293)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred             CCCCCEeeEeEEEEECCEEEEEEEecCCCcHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCcHHH
Confidence            589999999999999887767777777666554332    12389999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++........  .....||+.||||
T Consensus       147 ILl~~~~~vkl~DFG~a~~~~~~~~~--~~~~~gt~~Y~aP  185 (293)
T d1yhwa1         147 ILLGMDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAP  185 (293)
T ss_dssp             EEECTTCCEEECCCTTCEECCSTTCC--BCCCCSCGGGCCH
T ss_pred             eEECCCCcEeeccchhheeecccccc--ccccccCCCccCh
Confidence                      4899999876544322  3456799999998

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.90  E-value=8.7e-25  Score=127.31  Aligned_cols=99  Identities=22%  Similarity=0.307  Sum_probs=79.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||++++++.+.+...++.+++..+.+......   ...+++.++..++.|++.|+.|+|++   +++|||+||+|
T Consensus        72 l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~~~~---~~~l~e~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~N  145 (309)
T d1u5ra_          72 LRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVH---KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGN  145 (309)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGG
T ss_pred             CCCCCEeeEEEEEEECCEEEEEEEecCCCchHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcce
Confidence            6899999999999988776677777765544322221   23389999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||++......      ....||+.||||
T Consensus       146 ILl~~~~~~Kl~DFG~a~~~~~~------~~~~GT~~Y~AP  180 (309)
T d1u5ra_         146 ILLSEPGLVKLGDFGSASIMAPA------NSFVGTPYWMAP  180 (309)
T ss_dssp             EEEETTTEEEECCCTTCBSSSSB------CCCCSCGGGCCH
T ss_pred             EEECCCCCEEEeecccccccCCC------CccccCccccCH
Confidence                      4899998765432      345799999998

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1e-24  Score=124.64  Aligned_cols=105  Identities=22%  Similarity=0.326  Sum_probs=75.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||+++|+|...+...++++++..+++...+...  ...+++.++..++.|++.|+.|+|++   +++|||+||+|
T Consensus        57 l~HpnIv~~~g~~~~~~~~~lv~E~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qia~gl~~lH~~---~iiHrDlKp~N  131 (263)
T d1sm2a_          57 LSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARN  131 (263)
T ss_dssp             CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCTTCSGGG
T ss_pred             cCCCCcccccceeccCCceEEEEEecCCCcHHHHhhcc--ccCCCHHHHHHHHHHHHHHHHhhhcc---ceeecccchhh
Confidence            68999999999999888777788888877766655432  23388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++........ ......||+.||||
T Consensus       132 ill~~~~~~Kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aP  171 (263)
T d1sm2a_         132 CLVGENQVIKVSDFGMTRFVLDDQYT-SSTGTKFPVKWASP  171 (263)
T ss_dssp             EEECGGGCEEECSCC-------------------CTTSCCH
T ss_pred             eeecCCCCeEecccchheeccCCCce-eecceecCcccCCh
Confidence                      5999999876544322 12345688999998

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.90  E-value=9.5e-25  Score=126.70  Aligned_cols=106  Identities=16%  Similarity=0.227  Sum_probs=73.8

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||+++|+|...+...++++++..+.+.......  ...+++.++..++.|++.|+.|+|++   +++|||+||+|
T Consensus        84 l~HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~--~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHrDlKp~N  158 (299)
T d1jpaa_          84 FDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQN--DGQFTVIQLVGMLRGIAAGMKYLADM---NYVHRDLAARN  158 (299)
T ss_dssp             CCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGG
T ss_pred             CCCCCCccEEEEEeeCCEEEEEEEecCCCcceeeeccc--cCCCCHHHHHHHHHHHHHHHHHHhhC---CCccCccccce
Confidence            68999999999999888777777888877766554432  23389999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCccccc---ccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLH---STRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~---~~~~~~~~~~~aP  111 (111)
                                |+|||+++.+........   .....+|+.||||
T Consensus       159 ILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aP  202 (299)
T d1jpaa_         159 ILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP  202 (299)
T ss_dssp             EEECTTCCEEECCC-----------------------CGGGSCH
T ss_pred             EEECCCCcEEECCcccceEccCCCCcceeeecccccCCccccCH
Confidence                      489999987654332211   1224578899998

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.90  E-value=1.2e-24  Score=125.59  Aligned_cols=106  Identities=23%  Similarity=0.299  Sum_probs=83.3

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||+++++|.+++...++.+++..+.+...+... ....+++..+..++.|++.|+.|+|++   +++|||+||+|
T Consensus        70 l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~l~~~-~~~~~~~~~~~~i~~qi~~gL~yLH~~---~iiHrDlKp~N  145 (287)
T d1opja_          70 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARN  145 (287)
T ss_dssp             CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHS-CTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGG
T ss_pred             CCCCCEecCCccEeeCCeeEEEeecccCcchHHHhhhc-cccchHHHHHHHHHHHHHHHHHHHHHC---CcccCccccCe
Confidence            68999999999999877777777777777665554332 223489999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                |+|||+++......... .....+++.||||
T Consensus       146 ILl~~~~~~Kl~DFG~a~~~~~~~~~~-~~~~~g~~~y~aP  185 (287)
T d1opja_         146 CLVGENHLVKVADFGLSRLMTGDTYTA-HAGAKFPIKWTAP  185 (287)
T ss_dssp             EEECGGGCEEECCCCCTTTCCSSSSEE-ETTEEECGGGCCH
T ss_pred             EEECCCCcEEEccccceeecCCCCcee-eccccccccccCh
Confidence                      49999998765543221 2334578889997

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.5e-24  Score=127.60  Aligned_cols=103  Identities=22%  Similarity=0.189  Sum_probs=83.3

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||++++++.+.+...++.+++..+.+......   ...+++.++..++.|++.|+.|+|++   +++|||+||+|
T Consensus        62 l~hp~Iv~l~~~~~~~~~~~iv~ey~~gg~L~~~~~~---~~~~~e~~~~~~~~qil~al~ylH~~---~iiHRDlKP~N  135 (337)
T d1o6la_          62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR---ERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLEN  135 (337)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGG
T ss_pred             CCCCCEEEEEeeeccccccccceeccCCCchhhhhhc---ccCCcHHHHHHHHHHHhhhhhhhhhc---CccccccCHHH
Confidence            5899999999999997766667777776655444332   23488999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++........  ..+.+||+.||||
T Consensus       136 ILl~~~g~vkl~DFG~a~~~~~~~~~--~~~~~GT~~Y~aP  174 (337)
T d1o6la_         136 LMLDKDGHIKITDFGLCKEGISDGAT--MKTFCGTPEYLAP  174 (337)
T ss_dssp             EEECTTSCEEECCCTTCBCSCCTTCC--BCCCEECGGGCCG
T ss_pred             eEecCCCCEEEeecccccccccCCcc--cccceeCHHHhhh
Confidence                      4999999876544332  4457899999998

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=5.5e-24  Score=122.75  Aligned_cols=105  Identities=21%  Similarity=0.280  Sum_probs=81.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||+++|++.... ..+++++++.+++...+...  ...+++.++..++.|++.|+.|+|++   +++|||+||+|
T Consensus        66 l~HpnIv~l~g~~~~~~-~~lvmE~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~gL~ylH~~---~iiHrDlKp~N  139 (285)
T d1u59a_          66 LDNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARN  139 (285)
T ss_dssp             CCCTTBCCEEEEEESSS-EEEEEECCTTEEHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred             CCCCCEeeEeeeeccCe-EEEEEEeCCCCcHHHHhhcc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCcCchhh
Confidence            68999999999997543 45666777776665554332  23489999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccc-cccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARL-HSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~-~~~~~~~~~~~~aP  111 (111)
                                ++|||+++......... ......||+.||||
T Consensus       140 ill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aP  181 (285)
T d1u59a_         140 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAP  181 (285)
T ss_dssp             EEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCH
T ss_pred             eeeccCCceeeccchhhhcccccccccccccccccCccccCh
Confidence                      49999998776543321 12345688999998

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.89  E-value=4.2e-24  Score=126.22  Aligned_cols=103  Identities=20%  Similarity=0.243  Sum_probs=83.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||++++++.+.+...++++++..+++...+...  ...+++.++..++.|++.|+.|||++   +++||||||+|
T Consensus        80 l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~l~~~--~~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHrDiKp~N  154 (350)
T d1koaa2          80 LRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADE--HNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPEN  154 (350)
T ss_dssp             TCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTCT--TSCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGG
T ss_pred             CCCCCCCcEEEEEEECCEEEEEEEcCCCCCHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhc---CCeeeeechhH
Confidence            68999999999999987776777777666655444322  22389999999999999999999999   99999999999


Q ss_pred             ------------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ------------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ------------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                  ++|||+++.+.....   ..+..||+.||||
T Consensus       155 Ill~~~~~~~vkL~DFG~a~~~~~~~~---~~~~~gT~~Y~aP  194 (350)
T d1koaa2         155 IMFTTKRSNELKLIDFGLTAHLDPKQS---VKVTTGTAEFAAP  194 (350)
T ss_dssp             EEESSTTSCCEEECCCTTCEECCTTSC---EEEECSCTTTCCH
T ss_pred             eeeccCCCCeEEEeecchheecccccc---cceecCcccccCH
Confidence                        489999887654432   3456789999998

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.89  E-value=2e-24  Score=125.75  Aligned_cols=102  Identities=25%  Similarity=0.350  Sum_probs=71.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||++++++.+.+...++.++++.+++...+..   ...+++.++..++.|++.|+.|+|++   +++|||+||+|
T Consensus        64 l~HpnIv~l~~~~~~~~~~~lvmE~~~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~N  137 (307)
T d1a06a_          64 IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVE---KGFYTERDASRLIFQVLDAVKYLHDL---GIVHRDLKPEN  137 (307)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHT---CSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGG
T ss_pred             CCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHhhhc---ccCCCHHHHHHHHHHHHHHHHhhhhc---eeeeEEecccc
Confidence            6899999999999987766666677766666555433   23489999999999999999999999   99999999999


Q ss_pred             -------------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 -------------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 -------------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                   ++|||+++.......   ..+.+||+.||||
T Consensus       138 il~~~~~~~~~vkl~DFG~a~~~~~~~~---~~~~~GT~~y~AP  178 (307)
T d1a06a_         138 LLYYSLDEDSKIMISDFGLSKMEDPGSV---LSTACGTPGYVAP  178 (307)
T ss_dssp             EEESSSSTTCCEEECCC---------------------CTTSCH
T ss_pred             eeecccCCCceEEEeccceeEEccCCCe---eeeeeeCccccCc
Confidence                         389999876543321   3456799999998

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=3.6e-25  Score=129.62  Aligned_cols=101  Identities=22%  Similarity=0.317  Sum_probs=79.8

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHE-KVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~-~~~~~i~h~~l~~~   79 (111)
                      ++|||||+++++|.+.+...++++++..+++...+...   ..+++..+..++.|++.|+.|+|+ +   +|+|||+||+
T Consensus        61 l~HpnIv~l~~~~~~~~~~~iVmEy~~gg~L~~~l~~~---~~l~~~~~~~~~~qil~aL~yLH~~~---~IiHRDiKP~  134 (322)
T d1s9ja_          61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA---GRIPEQILGKVSIAVIKGLTYLREKH---KIMHRDVKPS  134 (322)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHHH---CCCCSCCSGG
T ss_pred             CCCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHhC---CEEccccCHH
Confidence            58999999999999888777777777776665554322   238999999999999999999996 6   8999999999


Q ss_pred             C----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           80 N----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |          ++|||+|+......    ..+.+||+.||||
T Consensus       135 NILl~~~~~vkl~DFGla~~~~~~~----~~~~~GT~~Y~AP  172 (322)
T d1s9ja_         135 NILVNSRGEIKLCDFGVSGQLIDSM----ANSFVGTRSYMSP  172 (322)
T ss_dssp             GEEECTTCCEEECCCCCCHHHHHHT----C---CCSSCCCCH
T ss_pred             HeeECCCCCEEEeeCCCccccCCCc----cccccCCccccCc
Confidence            9          48999987543221    3456899999998

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=4.3e-24  Score=122.81  Aligned_cols=104  Identities=21%  Similarity=0.300  Sum_probs=79.5

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||+++|+|.++. ..+++++++.+++...+..   ...+++.++..++.|++.|+.|+|++   +++|||+||+|
T Consensus        65 l~HpnIv~~~g~~~~~~-~~lvmE~~~~g~L~~~l~~---~~~l~~~~~~~i~~qi~~gl~ylH~~---~iiHrDlKp~N  137 (277)
T d1xbba_          65 LDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARN  137 (277)
T ss_dssp             CCCTTBCCEEEEEESSS-EEEEEECCTTEEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred             CCCCCCceEEEEeccCC-EEEEEEcCCCCcHHHHHhh---ccCCCHHHHHHHHHHHHHHHhhHHhC---CcccCCCcchh
Confidence            68999999999997543 4566677777666555433   23389999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccc-cccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARL-HSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~-~~~~~~~~~~~~aP  111 (111)
                                ++|||+++......... ......||+.||||
T Consensus       138 ill~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~AP  179 (277)
T d1xbba_         138 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP  179 (277)
T ss_dssp             EEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCH
T ss_pred             hcccccCcccccchhhhhhccccccccccccccCCCceecCc
Confidence                      48999998765543321 12345789999998

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=3.4e-24  Score=123.55  Aligned_cols=106  Identities=17%  Similarity=0.216  Sum_probs=74.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||+++|++.+.+....+.+++..+.+.......  ...+++.++..++.|++.|+.|+|++   +++|||+||+|
T Consensus        66 l~H~nIv~~~g~~~~~~~~~~v~e~~~~~~l~~~~~~~--~~~~~~~~~~~i~~~i~~gl~~lH~~---~iiHrDlKp~N  140 (283)
T d1mqba_          66 FSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREK--DGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARN  140 (283)
T ss_dssp             CCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHT--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGG
T ss_pred             cCCCCEeeeeEEEecCCceEEEEEecccCcchhhhhcc--cccccHHHHHHHHHHHHHhhhhcccc---ccccCccccce
Confidence            58999999999999877776777777665544433222  23389999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCccccc-ccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLH-STRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~-~~~~~~~~~~~aP  111 (111)
                                |+|||+++.......... .....||+.||||
T Consensus       141 ILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~AP  182 (283)
T d1mqba_         141 ILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAP  182 (283)
T ss_dssp             EEECTTCCEEECCCCC-----------------CCCGGGSCH
T ss_pred             EEECCCCeEEEcccchhhcccCCCccceEeccCCCCccccCH
Confidence                      489999987655433211 2335688999998

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=5.6e-24  Score=121.92  Aligned_cols=101  Identities=25%  Similarity=0.330  Sum_probs=75.6

Q ss_pred             CCCccceeeeeeeeeCCc----cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC--eeec
Q 047898            1 LKHENLVELLGYCVEGNL----RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPS--IIQR   74 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~--i~h~   74 (111)
                      ++|||||++++++.....    ..++.+++..+++...+..   ...+++.++..++.|++.|+.|+|++   +  ++||
T Consensus        65 l~HpnIv~~~~~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~gl~yLH~~---~~~IiHr  138 (270)
T d1t4ha_          65 LQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHR  138 (270)
T ss_dssp             CCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCS
T ss_pred             CCCCCeeeEEEEEeeccccCCEEEEEEeCCCCCcHHHHHhc---cccccHHHHHHHHHHHHHHHHHHHHC---CCCEEeC
Confidence            689999999999975321    2234455555554443322   23488999999999999999999998   7  9999


Q ss_pred             CCCCCC-----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           75 DIRSSN-----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        75 ~l~~~n-----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |+||+|           ++|||+++......    ..+..||+.||||
T Consensus       139 DiKp~NILl~~~~~~~Kl~DFGla~~~~~~~----~~~~~GT~~Y~aP  182 (270)
T d1t4ha_         139 DLKCDNIFITGPTGSVKIGDLGLATLKRASF----AKAVIGTPEFMAP  182 (270)
T ss_dssp             CCCGGGEEESSTTSCEEECCTTGGGGCCTTS----BEESCSSCCCCCG
T ss_pred             CcChhhceeeCCCCCEEEeecCcceeccCCc----cCCcccCccccCH
Confidence            999999           48999997543322    3456899999998

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=4.5e-24  Score=124.70  Aligned_cols=105  Identities=17%  Similarity=0.289  Sum_probs=76.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||+++|+|.++. ...+++++..+.+......  ....+++.++..++.|++.|+.|||++   +++|||+||+|
T Consensus        68 l~HpnIv~l~g~~~~~~-~~~v~e~~~~~~l~~~~~~--~~~~~~~~~~~~i~~qi~~gl~yLH~~---~iiHrDlKp~N  141 (317)
T d1xkka_          68 VDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARN  141 (317)
T ss_dssp             CCCTTBCCEEEEEESSS-EEEEEECCTTCBHHHHHHH--TSSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGG
T ss_pred             CCCCCEeeEEEEEecCC-eeEEEEeccCCcccccccc--cccCCCHHHHHHHHHHHHHHHHHHHHc---CcccCcchhhc
Confidence            58999999999998755 3445555555544443332  233489999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++...............||+.||||
T Consensus       142 Ill~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~AP  182 (317)
T d1xkka_         142 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL  182 (317)
T ss_dssp             EEEEETTEEEECCCSHHHHTTTTCC--------CCTTTSCH
T ss_pred             ceeCCCCCeEeeccccceecccccccccccccccCccccCh
Confidence                      5999999876554433223445689999998

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=5.7e-24  Score=122.03  Aligned_cols=105  Identities=19%  Similarity=0.258  Sum_probs=80.4

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||+++|++.++. ..+++++++.+++........ ...+++.++..++.|++.|+.|+|++   +++||||||+|
T Consensus        65 l~HpnIv~~~g~~~~~~-~~iv~Ey~~~g~L~~~~~~~~-~~~l~~~~~~~i~~qi~~gl~~lH~~---~ivHrDiKp~N  139 (272)
T d1qpca_          65 LQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAAN  139 (272)
T ss_dssp             CCCTTBCCEEEEECSSS-CEEEEECCTTCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred             CCCCCEeEEEeeeccCC-eEEEEEeCCCCcHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccchhh
Confidence            58999999999886543 456667777766655433322 22389999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                |+|||+++........ ......+|+.||||
T Consensus       140 Ill~~~~~~Kl~DFGla~~~~~~~~~-~~~~~~gt~~y~AP  179 (272)
T d1qpca_         140 ILVSDTLSCKIADFGLARLIEDNEYT-AREGAKFPIKWTAP  179 (272)
T ss_dssp             EEECTTSCEEECCCTTCEECSSSCEE-CCTTCCCCTTTSCH
T ss_pred             eeeecccceeeccccceEEccCCccc-cccccCCcccccCh
Confidence                      4899999876544322 12345688999998

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.88  E-value=2.5e-23  Score=122.98  Aligned_cols=103  Identities=20%  Similarity=0.230  Sum_probs=81.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||+++++|.+.+...++++++..+++......  ....+++.++..++.|++.|+.|+|++   +++||||||+|
T Consensus        83 l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~~~~--~~~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHRDiKp~N  157 (352)
T d1koba_          83 LHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAA--EDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPEN  157 (352)
T ss_dssp             CCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTC--TTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGG
T ss_pred             CCCCCCCcEEEEEEECCEEEEEEEcCCCChHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---Ceeeccccccc
Confidence            6899999999999987766666666665555433322  223389999999999999999999999   99999999999


Q ss_pred             ------------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ------------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ------------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                  ++|||++........   ..+..||+.||||
T Consensus       158 ILl~~~~~~~vkL~DFGla~~~~~~~~---~~~~~gt~~y~aP  197 (352)
T d1koba_         158 IMCETKKASSVKIIDFGLATKLNPDEI---VKVTTATAEFAAP  197 (352)
T ss_dssp             EEESSTTCCCEEECCCTTCEECCTTSC---EEEECSSGGGCCH
T ss_pred             ccccccCCCeEEEeecccceecCCCCc---eeeccCcccccCH
Confidence                        379999987654432   3445789999997

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.88  E-value=1.9e-23  Score=122.00  Aligned_cols=100  Identities=24%  Similarity=0.312  Sum_probs=79.3

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||++++++.+.+...++.+++..+.+.....   ....++..++..++.|++.|+.|+|++   +++||||||+|
T Consensus        61 l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~l~~~~~---~~~~~~~~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~N  134 (316)
T d1fota_          61 VTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLR---KSQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPEN  134 (316)
T ss_dssp             CCBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH---HTSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGG
T ss_pred             ccCcChhheeeeEeeCCeeeeEeeecCCcccccccc---ccccccccHHHHHHHHHHHhhhhhccC---cEEccccCchh
Confidence            589999999999998776666666665544333332   223378888899999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++.....     ..+.+||+.||||
T Consensus       135 ILl~~~g~vkL~DFG~a~~~~~~-----~~~~~Gt~~Y~AP  170 (316)
T d1fota_         135 ILLDKNGHIKITDFGFAKYVPDV-----TYTLCGTPDYIAP  170 (316)
T ss_dssp             EEECTTSCEEECCCSSCEECSSC-----BCCCCSCTTTCCH
T ss_pred             eeEcCCCCEEEecCccceEeccc-----cccccCcccccCH
Confidence                      4899999876443     2346899999998

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=4.1e-23  Score=119.78  Aligned_cols=103  Identities=27%  Similarity=0.280  Sum_probs=79.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||++++++...+...++++++..+......   .....+++.++..++.|++.|+.|+|++   +++|||+||+|
T Consensus        57 l~hpnIv~~~~~~~~~~~~~ivmE~~~~~~~~~~~---~~~~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDiKp~N  130 (299)
T d1ua2a_          57 LSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIK---DNSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNN  130 (299)
T ss_dssp             CCCTTBCCEEEEECCTTCCEEEEECCSEEHHHHHT---TCCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGG
T ss_pred             CCCCCEeEEEeeeccCCceeehhhhhcchHHhhhh---hcccCCCHHHHHHHHHHHHHHHHHhhcc---ceecccCCcce
Confidence            58999999999999877666666665544332222   2233488889999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.++........  ....+||+.||||
T Consensus       131 Ili~~~~~~KL~DFG~a~~~~~~~~~--~~~~~gt~~y~aP  169 (299)
T d1ua2a_         131 LLLDENGVLKLADFGLAKSFGSPNRA--YTHQVVTRWYRAP  169 (299)
T ss_dssp             EEECTTCCEEECCCGGGSTTTSCCCC--CCCSCCCCTTCCH
T ss_pred             EEecCCCccccccCccccccCCCccc--ccceecChhhccH
Confidence                      4899999876554332  3456789999997

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.87  E-value=2.4e-23  Score=123.53  Aligned_cols=101  Identities=17%  Similarity=0.183  Sum_probs=81.1

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||++++++.+.+...++++++..+++...+..   ...+++.++..++.|++.|+.|+|++   +++|||+||+|
T Consensus        64 ~~hpnIv~l~~~~~~~~~~~ivmE~~~gg~L~~~l~~---~~~~~e~~~~~~~~qi~~aL~ylH~~---~iiHrDlKP~N  137 (364)
T d1omwa3          64 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ---HGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPAN  137 (364)
T ss_dssp             SCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred             CCCCcEEEEEEEEEECCEEEEEEEecCCCcHHHHHHh---cccccHHHHHHHHHHHHHHHHHHHHC---Cccceeeccce
Confidence            4799999999999987766666677666655544432   23378899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++......    .....||+.||||
T Consensus       138 ILl~~~g~iKl~DFGla~~~~~~~----~~~~~GT~~y~AP  174 (364)
T d1omwa3         138 ILLDEHGHVRISDLGLACDFSKKK----PHASVGTHGYMAP  174 (364)
T ss_dssp             EEECSSSCEEECCCTTCEECSSSC----CCSCCSCGGGCCH
T ss_pred             eEEcCCCcEEEeeeceeeecCCCc----ccccccccccchh
Confidence                      48999998664432    3445799999998

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=3.3e-23  Score=121.16  Aligned_cols=103  Identities=22%  Similarity=0.268  Sum_probs=83.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||++++++.+++...++.+++..+++...+..   ...+++.++..++.|++.|+.|+|++   +++|||++|+|
T Consensus        60 ~~hp~Iv~~~~~~~~~~~~yivmEy~~~g~L~~~i~~---~~~~~e~~~~~~~~qi~~al~ylH~~---~iiHrDikp~N  133 (320)
T d1xjda_          60 WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQS---CHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDN  133 (320)
T ss_dssp             TTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGG
T ss_pred             CCCCcEEEEEEEEccCCceeEEEeecCCCcHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCcccc
Confidence            5899999999999998877777787777666554432   23388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++........  .....||+.|+||
T Consensus       134 iL~~~~~~~kl~DFG~a~~~~~~~~~--~~~~~gt~~y~aP  172 (320)
T d1xjda_         134 ILLDKDGHIKIADFGMCKENMLGDAK--TNTFCGTPDYIAP  172 (320)
T ss_dssp             EEECTTSCEEECCCTTCBCCCCTTCC--BCCCCSCGGGCCH
T ss_pred             eeecCCCceeccccchhhhccccccc--ccccCCCCCcCCH
Confidence                      4899999865543332  3456799999998

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=3.3e-23  Score=119.92  Aligned_cols=102  Identities=20%  Similarity=0.227  Sum_probs=81.8

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||+++++|.+.+...++.+++..+++...+..   ...+++.++..++.|++.|+.|||++   +++|||+||+|
T Consensus        70 l~HpnIv~~~~~~~~~~~~~iv~E~~~gg~L~~~i~~---~~~l~~~~~~~~~~qi~~al~yLH~~---~ivHrDiKp~N  143 (293)
T d1jksa_          70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPEN  143 (293)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred             CCCCCCCcEEEEEEECCEEEEEEEcCCCccccchhcc---ccccchhHHHHHHHHHHHHHHhhhhc---ceeecccccce
Confidence            5899999999999988777677777776665554432   22489999999999999999999999   99999999999


Q ss_pred             c--------------CCCcccccCCCCcccccccccCccccccCC
Q 047898           81 I--------------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 i--------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |              +|||++........   ..+..+|+.||||
T Consensus       144 ill~~~~~~~~~vkl~DfG~a~~~~~~~~---~~~~~~t~~y~AP  185 (293)
T d1jksa_         144 IMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAP  185 (293)
T ss_dssp             EEESCSSSSSCCEEECCCTTCEECTTSCB---CSCCCCCGGGCCH
T ss_pred             EEEecCCCcccceEecchhhhhhcCCCcc---ccccCCCCcccCH
Confidence            3              78999876644332   3456789999998

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=5e-23  Score=117.27  Aligned_cols=105  Identities=21%  Similarity=0.267  Sum_probs=82.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||++++|+|.+.+....+.+++..+.+.......  ...+++..+..++.|++.|+.|+|+.   +++|+|++++|
T Consensus        56 l~HpnIv~~~g~~~~~~~~~iv~Ey~~~g~l~~~~~~~--~~~~~~~~~~~i~~qi~~gl~~LH~~---~iiH~dlk~~N  130 (258)
T d1k2pa_          56 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARN  130 (258)
T ss_dssp             CCCTTBCCEEEEECCSSSEEEEEECCTTEEHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHT---TBCCSCCSGGG
T ss_pred             cCCCceeeEEEEEeeCCceEEEEEccCCCcHHHhhhcc--ccCCcHHHHHHHHHHHHHHHHHHhhc---Cccccccccee
Confidence            58999999999999877767777777766654443322  22378899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++........ ......+|+.|+||
T Consensus       131 ill~~~~~~kl~DfG~a~~~~~~~~~-~~~~~~~t~~y~aP  170 (258)
T d1k2pa_         131 CLVNDQGVVKVSDFGLSRYVLDDEYT-SSVGSKFPVRWSPP  170 (258)
T ss_dssp             EEECTTCCEEECCCSSCCBCSSSSCC-CCCCSCCCGGGCCH
T ss_pred             EEEcCCCcEEECcchhheeccCCCce-eecccCCCCCcCCc
Confidence                      4999999866543322 13346788999997

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.87  E-value=3.4e-23  Score=122.30  Aligned_cols=100  Identities=17%  Similarity=0.140  Sum_probs=79.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||++++++........+.+++..+.+...+..   ...+++.++..++.|++.|+.|||++   +++||||||+|
T Consensus        98 l~hpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~l~~---~~~l~e~~~~~i~~qi~~aL~yLH~~---~iiHRDIKP~N  171 (350)
T d1rdqe_          98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPEN  171 (350)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred             cCCCcEeecccccccccccccccccccccchhhhHhh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCcCCHHH
Confidence            5899999999999987766666666665554433322   22389999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                |+|||+++.....     ..+..||+.||||
T Consensus       172 ILl~~~g~ikL~DFG~a~~~~~~-----~~~~~Gt~~Y~AP  207 (350)
T d1rdqe_         172 LLIDQQGYIQVTDFGFAKRVKGR-----TWTLCGTPEALAP  207 (350)
T ss_dssp             EEECTTSCEEECCCTTCEECSSC-----BCCCEECGGGCCH
T ss_pred             cccCCCCCEEeeeceeeeecccc-----cccccCccccCCH
Confidence                      4899999876543     2346799999998

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1e-22  Score=119.66  Aligned_cols=104  Identities=16%  Similarity=0.175  Sum_probs=78.2

Q ss_pred             CCCccceeeeeeeeeC----CccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCC
Q 047898            1 LKHENLVELLGYCVEG----NLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDI   76 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l   76 (111)
                      .+|||||+++++|.+.    ....++.+++..+++...+... +...+++.++..++.|++.|+.|||++   +++|||+
T Consensus        62 ~~hpnIv~l~~~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~-~~~~l~e~~~~~i~~qi~~al~ylH~~---~iiHRDi  137 (335)
T d2ozaa1          62 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDV  137 (335)
T ss_dssp             TTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHSC-SCCCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             cCCCCCCeEEEEEeecccCCCEEEEEEECCCCCcHHHHHHhc-CCCCcCHHHHHHHHHHHHHHHHHHHHc---CCccccc
Confidence            3799999999999752    1123344555555555444332 233489999999999999999999999   9999999


Q ss_pred             CCCC-------------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           77 RSSN-------------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        77 ~~~n-------------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      ||+|             ++|||+++.......   .....||+.||||
T Consensus       138 Kp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~~---~~~~~gt~~y~aP  182 (335)
T d2ozaa1         138 KPENLLYTSKRPNAILKLTDFGFAKETTSHNS---LTTPCYTPYYVAP  182 (335)
T ss_dssp             SGGGEEESCSSTTCCEEECCCTTCEECCCCCC---CCCCSCCCSSCCC
T ss_pred             cccccccccccccccccccccceeeeccCCCc---cccccCCcccCCc
Confidence            9999             489999876654332   3456799999998

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=7.2e-24  Score=121.40  Aligned_cols=109  Identities=18%  Similarity=0.249  Sum_probs=68.4

Q ss_pred             CCCccceeeeeeeeeCC--ccchhhhhhhhhhcccCcCCC-CCCCCCCHHHHHHHHHHHHHHHHHhhhcC--CCCeeecC
Q 047898            1 LKHENLVELLGYCVEGN--LRDELIWIIHVITCKKGVQGA-QPSPVLDWMTRVRIVVDALRGLEYLHEKV--QPSIIQRD   75 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~i~~~l~~lh~~~--~~~i~h~~   75 (111)
                      ++|||||++++++.+..  ...++.+++..+++...+... .....+++.++..++.|++.|+.|+|++.  ..+++|||
T Consensus        60 l~HpnIv~~~~~~~~~~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrD  139 (269)
T d2java1          60 LKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRD  139 (269)
T ss_dssp             CCCTTBCCEEEEEEC----CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------
T ss_pred             CCCCCEeeEEEEEEeCCCCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCc
Confidence            58999999999997533  234456666666655443321 12234899999999999999999999871  11399999


Q ss_pred             CCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           76 IRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        76 l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +||+|          ++|||+++........  ..+..||+.||||
T Consensus       140 iKp~NIll~~~~~vkl~DFG~a~~~~~~~~~--~~~~~gt~~Y~AP  183 (269)
T d2java1         140 LKPANVFLDGKQNVKLGDFGLARILNHDTSF--AKAFVGTPYYMSP  183 (269)
T ss_dssp             CCGGGEEECTTSCEEECCHHHHHHC-------------CCCSCCCH
T ss_pred             CchhhcCcCCCCcEEEeeccceeecccCCCc--cccCCCCcccCCH
Confidence            99999          4899999876543322  3456789999998

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.9e-22  Score=117.99  Aligned_cols=103  Identities=20%  Similarity=0.192  Sum_probs=80.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||++++++.+.+...++.+++..+++...+...  ...+++.++..++.|++.|+.|||++   +++||||+|+|
T Consensus        58 l~HpnIv~~~~~~~~~~~~~lvmE~~~gg~L~~~i~~~--~~~l~e~~~~~i~~qi~~al~yLH~~---~iiHrDlKp~N  132 (321)
T d1tkia_          58 ARHRNILHLHESFESMEELVMIFEFISGLDIFERINTS--AFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPEN  132 (321)
T ss_dssp             SCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSS--SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGG
T ss_pred             CCCCCCCeEEEEEEECCEEEEEEecCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHc---CCCcccccccc
Confidence            58999999999999877766666776665554444322  22389999999999999999999999   99999999999


Q ss_pred             ------------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ------------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ------------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                  ++|||+++.......   ..+..+++.|+||
T Consensus       133 Ill~~~~~~~ikl~DFG~~~~~~~~~~---~~~~~~t~~y~ap  172 (321)
T d1tkia_         133 IIYQTRRSSTIKIIEFGQARQLKPGDN---FRLLFTAPEYYAP  172 (321)
T ss_dssp             EEESSSSCCCEEECCCTTCEECCTTCE---EEEEESCGGGSCH
T ss_pred             eeecCCCceEEEEcccchhhccccCCc---ccccccccccccc
Confidence                        379999876644332   2345678889886

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.1e-22  Score=116.62  Aligned_cols=104  Identities=21%  Similarity=0.271  Sum_probs=67.6

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||++++++.++ ...++.+++..+.+......  ....+++.++..++.|++.|+.|+|++   +++|||+||+|
T Consensus        65 l~HpnIv~l~~~~~~~-~~~iv~E~~~~g~l~~~~~~--~~~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDlKp~N  138 (273)
T d1mp8a_          65 FDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQV--RKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARN  138 (273)
T ss_dssp             CCCTTBCCEEEEECSS-SCEEEEECCTTEEHHHHHHH--TTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGG
T ss_pred             CCCCCEeeEEEEEecC-eEEEEEEeccCCcHHhhhhc--cCCCCCHHHHHHHHHHHHHHhhhhccc---Ceeccccchhh
Confidence            5899999999999653 34555566665555443322  223389999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++........ ......||+.|+||
T Consensus       139 Ill~~~~~~Kl~DfG~a~~~~~~~~~-~~~~~~gt~~y~ap  178 (273)
T d1mp8a_         139 VLVSSNDCVKLGDFGLSRYMEDSTYY-KASKGKLPIKWMAP  178 (273)
T ss_dssp             EEEEETTEEEECC--------------------CCGGGCCH
T ss_pred             eeecCCCcEEEccchhheeccCCcce-eccceecCcccchh
Confidence                      4899999865433221 13345678999997

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=5.9e-22  Score=114.89  Aligned_cols=107  Identities=27%  Similarity=0.380  Sum_probs=84.1

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCC-------------CCCCCCHHHHHHHHHHHHHHHHHhhhcCC
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQ-------------PSPVLDWMTRVRIVVDALRGLEYLHEKVQ   68 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~~~~~~~~~~i~~~l~~lh~~~~   68 (111)
                      +|||||+++++|.+......+++++..+.+...+....             ....+++.++..++.|++.|+.|+|+.  
T Consensus        77 ~HpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~--  154 (299)
T d1fgka_          77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK--  154 (299)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             CCCeEEecccccccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhC--
Confidence            79999999999998777777778887776655543322             123489999999999999999999999  


Q ss_pred             CCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           69 PSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        69 ~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                       +++|||+||+|          ++|||+++...............+++.|+||
T Consensus       155 -~ivHrDiKp~NiLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  206 (299)
T d1fgka_         155 -KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP  206 (299)
T ss_dssp             -TCCCSCCSGGGEEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCH
T ss_pred             -CEEeeeecccceeecCCCCeEeccchhhccccccccccccccCCCChhhhhh
Confidence             99999999999          4899998866544333223446788899987

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.84  E-value=2.7e-22  Score=116.44  Aligned_cols=108  Identities=23%  Similarity=0.333  Sum_probs=80.1

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCC---------------------CCCCCCCCHHHHHHHHHHHHHH
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQG---------------------AQPSPVLDWMTRVRIVVDALRG   59 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~l~~~~~~~~~~~i~~~   59 (111)
                      ++||||++++++|...+....+++++..+++...+..                     ......+++.++..++.|++.|
T Consensus        73 l~h~niv~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~g  152 (301)
T d1lufa_          73 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAG  152 (301)
T ss_dssp             CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHH
T ss_pred             cCCCCcccceeeeccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHH
Confidence            5899999999999987777777777766554433321                     1122238899999999999999


Q ss_pred             HHHhhhcCCCCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           60 LEYLHEKVQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        60 l~~lh~~~~~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +.|+|++   +++|||+|++|          |+|||+++...+........+..+++.|+||
T Consensus       153 l~ylH~~---~ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aP  211 (301)
T d1lufa_         153 MAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPP  211 (301)
T ss_dssp             HHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCH
T ss_pred             hhhcccC---CeEeeEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCH
Confidence            9999999   99999999999          5999999866554333223456788899997

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.3e-22  Score=116.91  Aligned_cols=105  Identities=21%  Similarity=0.279  Sum_probs=73.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||+++|+|.+. ...++++++..+.+........ ...+++.++..++.|++.|+.|||++   +++|+|+||+|
T Consensus        69 l~h~nIv~~~g~~~~~-~~~lv~Ey~~~g~l~~~~~~~~-~~~l~~~~~~~i~~~i~~gl~~LH~~---~ivH~DlKp~N  143 (285)
T d1fmka3          69 LRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAAN  143 (285)
T ss_dssp             CCCTTBCCEEEEECSS-SCEEEECCCTTCBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGG
T ss_pred             cccCCEeEEEEEEecC-CeEEEEEecCCCchhhhhhhcc-cccchHHHHHHHHHHHHHHHHHHhhh---heecccccceE
Confidence            6899999999998654 3556667777665444433222 22389999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                |+|||+++........ ......+|+.|+||
T Consensus       144 Ill~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aP  183 (285)
T d1fmka3         144 ILVGENLVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAP  183 (285)
T ss_dssp             EEECGGGCEEECCCCTTC---------------CCGGGSCH
T ss_pred             EEECCCCcEEEcccchhhhccCCCce-eeccccccccccCh
Confidence                      4999999866433221 12335688999997

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=2.5e-22  Score=116.42  Aligned_cols=107  Identities=20%  Similarity=0.282  Sum_probs=74.1

Q ss_pred             CCccceeeeeeeeeCCc-cchhhhhhhhhhcccCcCCCC-------------CCCCCCHHHHHHHHHHHHHHHHHhhhcC
Q 047898            2 KHENLVELLGYCVEGNL-RDELIWIIHVITCKKGVQGAQ-------------PSPVLDWMTRVRIVVDALRGLEYLHEKV   67 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~~~~~~~~~~i~~~l~~lh~~~   67 (111)
                      +|+||+.+++++...+. ..+++++++.+++...+....             ....+++.++..++.|++.|+.|+|++ 
T Consensus        75 ~h~~iv~~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~-  153 (299)
T d1ywna1          75 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-  153 (299)
T ss_dssp             CCTTBCCEEEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             CCCeEEEeeeeeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhC-
Confidence            68999999999876543 345567766665544432111             122388999999999999999999999 


Q ss_pred             CCCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           68 QPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        68 ~~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                        +++||||||+|          |+|||+++...............||+.||||
T Consensus       154 --~ivHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~AP  205 (299)
T d1ywna1         154 --KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP  205 (299)
T ss_dssp             --TCCCSCCCGGGEEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCH
T ss_pred             --CCcCCcCCccceeECCCCcEEEccCcchhhccccccccccCceeeCccccch
Confidence              99999999999          4999999876554433334456799999998

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=4.5e-22  Score=115.92  Aligned_cols=107  Identities=22%  Similarity=0.291  Sum_probs=82.7

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCC---------------CCCCCCCHHHHHHHHHHHHHHHHHhhhc
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGA---------------QPSPVLDWMTRVRIVVDALRGLEYLHEK   66 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~l~~~~~~~~~~~i~~~l~~lh~~   66 (111)
                      +|||||+++++|.+.....++.+++..+++...+...               .....+++..+..++.|++.|+.|||++
T Consensus        85 ~HpnIv~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~  164 (311)
T d1t46a_          85 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK  164 (311)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEEEEEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            6999999999999877777777777766554433221               1222488899999999999999999999


Q ss_pred             CCCCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           67 VQPSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        67 ~~~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                         +++|||+||+|          ++|||.++...............||+.|+||
T Consensus       165 ---~ivHrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aP  216 (311)
T d1t46a_         165 ---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAP  216 (311)
T ss_dssp             ---TCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCH
T ss_pred             ---CeeecccccccccccccCcccccccchheeccCCCcceEeeecccChHHcCH
Confidence               99999999999          4899999877654443334456789999997

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.84  E-value=4.7e-22  Score=114.25  Aligned_cols=101  Identities=23%  Similarity=0.229  Sum_probs=81.8

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      .|||||++++++.+++...++.++++.+++...+..   ...+++.++..++.|++.|+.|+|++   +++|||++|+| 
T Consensus        68 ~hpnIv~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~---~~~l~e~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Ni  141 (277)
T d1phka_          68 GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE---KVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENI  141 (277)
T ss_dssp             TCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGE
T ss_pred             CCCCeEEEEeecccCcceEEEEEcCCCchHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHc---CCcccccccceE
Confidence            399999999999988777777777777666555532   23489999999999999999999999   99999999999 


Q ss_pred             ---------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ---------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ---------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                               ++|||+++.......   .....||..|+||
T Consensus       142 ll~~~~~~kl~DFG~a~~~~~~~~---~~~~~gt~~y~~P  178 (277)
T d1phka_         142 LLDDDMNIKLTDFGFSCQLDPGEK---LREVCGTPSYLAP  178 (277)
T ss_dssp             EECTTCCEEECCCTTCEECCTTCC---BCCCCSCGGGCCH
T ss_pred             EEcCCCCeEEccchheeEccCCCc---eeeeeccCCCCCH
Confidence                     489999987654322   2345788899887

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=7.9e-22  Score=114.81  Aligned_cols=104  Identities=25%  Similarity=0.299  Sum_probs=81.4

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCC-------------CCCCCCCHHHHHHHHHHHHHHHHHhhhcCC
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGA-------------QPSPVLDWMTRVRIVVDALRGLEYLHEKVQ   68 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~   68 (111)
                      +|||||+++|+|.+.+...++.++++.+++...+...             .....+++.++..++.|++.|+.|+|++  
T Consensus        69 ~HpnIv~~~~~~~~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~--  146 (309)
T d1fvra_          69 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK--  146 (309)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             CCCCEeeEEEEEecCCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcC--
Confidence            6999999999999988777788888877766655432             1234489999999999999999999999  


Q ss_pred             CCeeecCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           69 PSIIQRDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        69 ~~i~h~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                       +++|||++|+|          |+|||+++.......   .....+|..|+||
T Consensus       147 -~iiHrDlkp~NIL~~~~~~~kl~DfG~a~~~~~~~~---~~~~~gt~~y~aP  195 (309)
T d1fvra_         147 -QFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVK---KTMGRLPVRWMAI  195 (309)
T ss_dssp             -TEECSCCSGGGEEECGGGCEEECCTTCEESSCEECC---C----CCTTTCCH
T ss_pred             -CccccccccceEEEcCCCceEEcccccccccccccc---ccceecCCcccch
Confidence             99999999999          489999876543322   2344678899987

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=5.2e-22  Score=115.07  Aligned_cols=104  Identities=25%  Similarity=0.300  Sum_probs=77.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||++++++.++....++.+++..+... ... ......+++.++..++.|++.|+.|+|++   +++|||+||+|
T Consensus        58 l~Hp~Iv~~~~~~~~~~~~~iv~e~~~~~~~~-~~~-~~~~~~l~e~~~~~~~~qil~~L~yLH~~---~IiHrDiKpeN  132 (298)
T d1gz8a_          58 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK-FMD-ASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQN  132 (298)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEEECCSEEHHH-HHH-HTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGG
T ss_pred             CCCCcEEEeccccccccceeEEEeecCCchhh-hhh-hhcccCCCHHHHHHHHHHHHHHHHHhhcC---CEEccccCchh
Confidence            58999999999999977655555555432221 111 12233489999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.++........  .....||+.|+||
T Consensus       133 Il~~~~~~~kl~DFG~a~~~~~~~~~--~~~~~gt~~y~ap  171 (298)
T d1gz8a_         133 LLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAP  171 (298)
T ss_dssp             EEECTTSCEEECSTTHHHHHCCCSBC--TTCCBCCCTTCCH
T ss_pred             eeecccCcceeccCCcceeccCCccc--ceeecccceeeeh
Confidence                      4899998765443322  3345788899887

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=3.6e-22  Score=114.51  Aligned_cols=105  Identities=24%  Similarity=0.325  Sum_probs=75.9

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||+++|+|.++. ...++++++.+.+.......  ...+++..+..++.|++.|+.|+|++   +++||||+|+|
T Consensus        68 l~H~nIv~~~g~~~~~~-~~lv~e~~~~~~l~~~~~~~--~~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDikp~N  141 (273)
T d1u46a_          68 LDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARN  141 (273)
T ss_dssp             CCCTTBCCEEEEECSSS-CEEEEECCTTCBHHHHHHHH--GGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGG
T ss_pred             CCCCCEEEEEEEEeecc-hheeeeeecCcchhhhhhcc--cCCCCHHHHHHHHHHHHHHHHHhhhC---CEeeeeecHHH
Confidence            68999999999997643 44555666655544333221  22388999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCccccc-ccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLH-STRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~-~~~~~~~~~~~aP  111 (111)
                                ++|||+++.......... .....++..|+||
T Consensus       142 Ill~~~~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aP  183 (273)
T d1u46a_         142 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP  183 (273)
T ss_dssp             EEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCH
T ss_pred             hccccccceeeccchhhhhcccCCCcceecCccccCcccCCH
Confidence                      489999987755433221 2334678889987

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1.2e-21  Score=112.33  Aligned_cols=100  Identities=16%  Similarity=0.170  Sum_probs=75.0

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhh-hcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVI-TCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      .|||||++++++.+.+....+++++..+ ......   .....+++.++..++.|++.|+.|+|++   +++|||+||+|
T Consensus        67 ~h~nIv~~~~~~~~~~~~~lv~e~~~~~~~l~~~~---~~~~~l~e~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~N  140 (273)
T d1xwsa_          67 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDEN  140 (273)
T ss_dssp             SSCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHH---HHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred             CCCCccEEEEEEeeCCeEEEEEEeccCcchHHHHH---hccCCCCHHHHHHHHHHHHHHHHHHHHC---CCccccCcccc
Confidence            3899999999999876555555544321 111111   1223489999999999999999999999   99999999999


Q ss_pred             -----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 -----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 -----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                 ++|||+++......    ..+..||+.||||
T Consensus       141 Ill~~~~~~vkl~DFG~a~~~~~~~----~~~~~GT~~y~aP  178 (273)
T d1xwsa_         141 ILIDLNRGELKLIDFGSGALLKDTV----YTDFDGTRVYSPP  178 (273)
T ss_dssp             EEEETTTTEEEECCCTTCEECCSSC----BCCCCSCGGGSCH
T ss_pred             eEEecCCCeEEECccccceeccccc----ccccccCCCcCCH
Confidence                       48999987654332    3456799999998

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=6.2e-21  Score=111.11  Aligned_cols=106  Identities=17%  Similarity=0.272  Sum_probs=80.7

Q ss_pred             CCCccceeeeeeeeeCC-ccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEGN-LRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~   79 (111)
                      ++|||||+++|++...+ ....++++++.+.+.......  ...+++..+..++.|++.|+.|+|+.   +++|||+|++
T Consensus        85 l~HpnIv~~~g~~~~~~~~~~lv~E~~~~g~l~~~~~~~--~~~~~~~~~~~i~~qia~gL~~lH~~---~iiHrDLK~~  159 (311)
T d1r0pa_          85 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAAR  159 (311)
T ss_dssp             CCCTTBCCCCEEEEETTTEEEEEEECCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGG
T ss_pred             CCCCCEeEEeEEEEecCCceEEEEEEeecCchhhhhccc--cccchHHHHHHHHHHHHHhhhhhccc---CcccCCccHH
Confidence            58999999999987644 445667777776665554432  23377888899999999999999999   9999999999


Q ss_pred             C----------cCCCcccccCCCCcccc--cccccCccccccCC
Q 047898           80 N----------IADFNLSNQAPNMAARL--HSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n----------i~~~g~~~~~~~~~~~~--~~~~~~~~~~~~aP  111 (111)
                      |          ++|||+++.........  ......||..|+||
T Consensus       160 NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aP  203 (311)
T d1r0pa_         160 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL  203 (311)
T ss_dssp             GEEECTTCCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCH
T ss_pred             hEeECCCCCEEEecccchhhccccccccceecccccccccccCh
Confidence            9          48999998765543221  12335688899987

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=4.4e-21  Score=111.61  Aligned_cols=108  Identities=16%  Similarity=0.258  Sum_probs=82.7

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCC-------CCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeee
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQG-------AQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQ   73 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h   73 (111)
                      ++|||||+++++|...+....+++++..+++...+..       ......+++.++..++.+++.|+.|+|++   +++|
T Consensus        80 l~h~nIv~~~~~~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~---~ivH  156 (308)
T d1p4oa_          80 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVH  156 (308)
T ss_dssp             CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBC
T ss_pred             cCCCCEeeeeeEEecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhC---Ceee
Confidence            5899999999999887777777777776655433221       11222368889999999999999999999   9999


Q ss_pred             cCCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           74 RDIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        74 ~~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      ||+|++|          |+|||+++...............+|+.|+||
T Consensus       157 rDlk~~NiLld~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aP  204 (308)
T d1p4oa_         157 RDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP  204 (308)
T ss_dssp             SCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCH
T ss_pred             ceEcCCceeecCCceEEEeecccceeccCCcceeeccceecccccCCH
Confidence            9999999          5999999876554433224445688999987

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=2.3e-21  Score=112.60  Aligned_cols=107  Identities=22%  Similarity=0.290  Sum_probs=78.3

Q ss_pred             CCCccceeeeeeeeeCCc----cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcC-----CCCe
Q 047898            1 LKHENLVELLGYCVEGNL----RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKV-----QPSI   71 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~-----~~~i   71 (111)
                      ++|||||++++++.+.+.    ..++++++..+++...+..    ..+++.++..++.+++.|+.|+|+..     ..++
T Consensus        54 ~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~----~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~I  129 (303)
T d1vjya_          54 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAI  129 (303)
T ss_dssp             CCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEE
T ss_pred             CCCCcCcceEEEEEeCCCcceEEEEEEecccCCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCe
Confidence            579999999999986542    2345666767666655542    23889999999999999999999621     1289


Q ss_pred             eecCCCCCC----------cCCCcccccCCCCccc--ccccccCccccccCC
Q 047898           72 IQRDIRSSN----------IADFNLSNQAPNMAAR--LHSTRVLGTFSYHAP  111 (111)
Q Consensus        72 ~h~~l~~~n----------i~~~g~~~~~~~~~~~--~~~~~~~~~~~~~aP  111 (111)
                      +|||+||+|          |+|||+++........  .......||+.||||
T Consensus       130 vHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aP  181 (303)
T d1vjya_         130 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP  181 (303)
T ss_dssp             ECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEECC----CCSCGGGCCH
T ss_pred             eccccCccceEEcCCCCeEEEecCccccccCCCcceeccccceecccCcCCh
Confidence            999999999          4999998866443321  113456799999998

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=5.4e-21  Score=112.89  Aligned_cols=105  Identities=20%  Similarity=0.281  Sum_probs=73.1

Q ss_pred             CCCccceeeeeeeeeCCcc------chhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeec
Q 047898            1 LKHENLVELLGYCVEGNLR------DELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQR   74 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~   74 (111)
                      ++||||++++++|......      .++++++..+..............+++.++..++.|++.|+.|||++   +|+||
T Consensus        70 l~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~---~IiHr  146 (350)
T d1q5ka_          70 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHR  146 (350)
T ss_dssp             CCCTTBCCEEEEEEEC--CCSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECC
T ss_pred             cCCCCCCcEEEEEEecCccCCceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhc---CCccc
Confidence            5899999999999754321      12333433221112221122334489999999999999999999999   99999


Q ss_pred             CCCCCC-----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           75 DIRSSN-----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        75 ~l~~~n-----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      ||||+|           ++|||++........   ..+..|+..|+||
T Consensus       147 DiKp~NILl~~~~~~~kl~DFG~a~~~~~~~~---~~~~~gt~~y~aP  191 (350)
T d1q5ka_         147 DIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRYYRAP  191 (350)
T ss_dssp             CCCGGGEEECTTTCCEEECCCTTCEECCTTSC---CCSCCSCTTSCCH
T ss_pred             CCCcceEEEecCCCceeEecccchhhccCCcc---cccccccccccCh
Confidence            999999           489999876644322   2445788889887

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.81  E-value=3.2e-21  Score=110.74  Aligned_cols=105  Identities=21%  Similarity=0.369  Sum_probs=67.9

Q ss_pred             CCCccceeeeeeeeeCCcc----chhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCC
Q 047898            1 LKHENLVELLGYCVEGNLR----DELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDI   76 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l   76 (111)
                      ++|||||++++++...+..    .++.++++.+.+.....   ....+++.++..++.|++.|+.|+|++   +++|||+
T Consensus        64 ~~hpniv~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~---~~~~l~~~~~~~i~~qi~~al~~lH~~---~iiHrDi  137 (277)
T d1o6ya_          64 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDV  137 (277)
T ss_dssp             CCCTTBCCEEEEEEEECSSSEEEEEEEECCCEEEHHHHHH---HHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             cCCCCCCcccceeeeccCCCceEEEEEECCCCCEehhhhc---ccCCCCHHHHHHHHHHHHHHHHHHHhC---CccCccc
Confidence            5899999999999864432    23444444443332222   223489999999999999999999999   9999999


Q ss_pred             CCCCc----------CCCcccccCCCCccc-ccccccCccccccCC
Q 047898           77 RSSNI----------ADFNLSNQAPNMAAR-LHSTRVLGTFSYHAP  111 (111)
Q Consensus        77 ~~~ni----------~~~g~~~~~~~~~~~-~~~~~~~~~~~~~aP  111 (111)
                      ||+||          .|||.+......... ....+..||+.||||
T Consensus       138 KP~NIll~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aP  183 (277)
T d1o6ya_         138 KPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP  183 (277)
T ss_dssp             SGGGEEEETTSCEEECCCTTCEECC----------------TTCCH
T ss_pred             cCcccccCccccceeehhhhhhhhccccccccccccccCcccccCH
Confidence            99993          788877654433221 123456799999998

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.80  E-value=1e-20  Score=109.03  Aligned_cols=103  Identities=25%  Similarity=0.295  Sum_probs=73.2

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++|||||++++++...+...++.++...+.+.....   ....++..++..++.|++.|+.|+|+.   +++|||+||+|
T Consensus        57 l~hpnIv~~~~~~~~~~~~~i~~e~~~~~~~~~~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~---~IvHrDiKp~N  130 (286)
T d1ob3a_          57 LKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDV---CEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQN  130 (286)
T ss_dssp             CCCTTBCCEEEEEECSSCEEEEEECCSEEHHHHHHT---STTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGG
T ss_pred             CCCCcEEeeeeecccCCceeEEEEeehhhhHHHHHh---hcCCcchhhhHHHHHHHHHHHHHhccC---cEEecCCCCce
Confidence            589999999999998776555555544333222222   234499999999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.+.........  .....+++.|+||
T Consensus       131 Ill~~~~~~kl~DfG~a~~~~~~~~~--~~~~~~~~~y~~p  169 (286)
T d1ob3a_         131 LLINREGELKIADFGLARAFGIPVRK--YTHEIVTLWYRAP  169 (286)
T ss_dssp             EEECTTSCEEECCTTHHHHHCC-----------CCCTTCCH
T ss_pred             eeEcCCCCEEecccccceecccCccc--cceecccchhhhH
Confidence                      3899998765443222  2334577778876

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1.9e-20  Score=108.65  Aligned_cols=105  Identities=28%  Similarity=0.461  Sum_probs=72.3

Q ss_pred             CCCccceeeeeeeeeCCc--cchhhhhhhhhhcccC-cCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCC
Q 047898            1 LKHENLVELLGYCVEGNL--RDELIWIIHVITCKKG-VQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIR   77 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~   77 (111)
                      ++||||++++++|.....  ...++.+++....+.. .........+++..+..++.|++.|+.|+|++   +++|||+|
T Consensus        67 ~~HpnIv~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~---~ivHrDiK  143 (305)
T d1blxa_          67 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLK  143 (305)
T ss_dssp             TCCTTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCC
T ss_pred             cCCCCcceeeeeecccccccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecCCC
Confidence            379999999999974321  1222222222221111 11112233488999999999999999999999   99999999


Q ss_pred             CCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           78 SSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        78 ~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |+|          +.|||+++.......   .....||+.||||
T Consensus       144 p~NILi~~~~~~kl~dfg~~~~~~~~~~---~~~~~gT~~Y~AP  184 (305)
T d1blxa_         144 PQNILVTSSGQIKLADFGLARIYSFQMA---LTSVVVTLWYRAP  184 (305)
T ss_dssp             GGGEEECTTCCEEECSCCSCCCCCGGGG---GCCCCCCCTTCCH
T ss_pred             ccEEEEcCCCCeeecchhhhhhhccccc---CCCcccChhhcCc
Confidence            999          489998875443322   3567899999998

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=2.1e-21  Score=110.73  Aligned_cols=102  Identities=25%  Similarity=0.333  Sum_probs=72.1

Q ss_pred             CCCccceeeeeeeeeC-CccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 047898            1 LKHENLVELLGYCVEG-NLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~   79 (111)
                      ++||||++++|+|.+. +...+++++++.+++...+... ....+++..+..++.|++.|+.|+|+.   +++|+|++|+
T Consensus        57 l~HpnIv~~~g~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~~l~~~~~~~i~~~i~~al~ylH~~---~ivH~dlkp~  132 (262)
T d1byga_          57 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAAR  132 (262)
T ss_dssp             CCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGG
T ss_pred             CCCCCEeeEEEEEEecCCcEEEEEeccCCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHhhccccccC---ceeccccchH
Confidence            5899999999999654 3345677777777766555322 122378999999999999999999999   9999999999


Q ss_pred             C----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           80 N----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |          ++|||.++......     ....++..|+||
T Consensus       133 Nil~~~~~~~kl~dfg~s~~~~~~~-----~~~~~~~~y~aP  169 (262)
T d1byga_         133 NVLVSEDNVAKVSDFGLTKEASSTQ-----DTGKLPVKWTAP  169 (262)
T ss_dssp             GEEECTTSCEEECCCCC-----------------CCTTTSCH
T ss_pred             hheecCCCCEeecccccceecCCCC-----ccccccccCCCh
Confidence            9          48999887654332     234578889987

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.79  E-value=1e-19  Score=106.56  Aligned_cols=100  Identities=16%  Similarity=0.192  Sum_probs=72.7

Q ss_pred             CCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC-
Q 047898            2 KHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN-   80 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n-   80 (111)
                      .||||++++++|...... .++.+++.+....+....   ..++..++..++.|++.|+.|||++   +++|||+||+| 
T Consensus        88 ~hpnIv~~~~~~~~~~~~-~~~~v~e~~~~~~L~~~~---~~l~e~~i~~i~~qil~aL~~LH~~---gIvHrDiKp~NI  160 (328)
T d3bqca1          88 GGPNIITLADIVKDPVSR-TPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNV  160 (328)
T ss_dssp             TSTTBCCEEEEEECTTTC-SEEEEEECCCSCBGGGTT---TSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGE
T ss_pred             CCCCCcEEEEEEEecCCC-ceeEEEeecCCCcHHHHh---cCCCHHHHHHHHHHHHHHHHHHhhc---ccccccccccce
Confidence            499999999999864322 222333333332222221   2389999999999999999999999   99999999999 


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||.++.......   .....+|..|+||
T Consensus       161 Li~~~~~~vkl~DFG~a~~~~~~~~---~~~~~~t~~y~aP  198 (328)
T d3bqca1         161 MIDHEHRKLRLIDWGLAEFYHPGQE---YNVRVASRYFKGP  198 (328)
T ss_dssp             EEETTTTEEEECCGGGCEECCTTCC---CCSCCSCGGGCCH
T ss_pred             EEcCCCCeeeecccccceeccCCCc---ccccccCccccCc
Confidence                      489999876654332   3455788899987

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=8.6e-20  Score=107.54  Aligned_cols=104  Identities=25%  Similarity=0.343  Sum_probs=74.7

Q ss_pred             CCCccceeeeeeeeeCCcc----chhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCC
Q 047898            1 LKHENLVELLGYCVEGNLR----DELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDI   76 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l   76 (111)
                      ++||||+++++++......    ..+++++..+++...+.    ...+++..+..++.|++.|+.|+|++   +++||||
T Consensus        63 l~hp~iv~~~~~~~~~~~~~~~~~~l~~~~~~g~L~~~l~----~~~l~~~~i~~i~~qil~al~yLH~~---~iiHRDI  135 (345)
T d1pmea_          63 FRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLK----TQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDL  135 (345)
T ss_dssp             CCCTTBCCCCEEECCSSTTTCCCEEEEEECCCEEHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             cCCCCCCcEEEEEeeccccccceEEEEEeecCCchhhhhh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCC
Confidence            6899999999999765432    12223333333333332    12389999999999999999999999   9999999


Q ss_pred             CCCC----------cCCCcccccCCCCcccc-cccccCccccccCC
Q 047898           77 RSSN----------IADFNLSNQAPNMAARL-HSTRVLGTFSYHAP  111 (111)
Q Consensus        77 ~~~n----------i~~~g~~~~~~~~~~~~-~~~~~~~~~~~~aP  111 (111)
                      ||+|          ++|||++.......... .....+||+.|+||
T Consensus       136 Kp~NILl~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aP  181 (345)
T d1pmea_         136 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP  181 (345)
T ss_dssp             CGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCG
T ss_pred             CcceEEECCCCCEEEcccCceeeccCCCccceeeccccccceechH
Confidence            9999          48999987654432211 13446788999987

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=4.8e-19  Score=102.11  Aligned_cols=103  Identities=21%  Similarity=0.227  Sum_probs=75.0

Q ss_pred             CCCccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            1 LKHENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      ++||||+++++++.+.....++.+++..+.+.....   ....++...+..++.|++.|+.|+|++   +++|||+||+|
T Consensus        58 l~h~niv~~~~~~~~~~~~~iv~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~q~~~aL~~lH~~---~IvHrDiKP~N  131 (292)
T d1unla_          58 LKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDS---CNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQN  131 (292)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEEECCSEEHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred             cCcCCEEeeccccccccceeEEeeeccccccccccc---cccccchhHHHHHHHHHHHHHHHhhcC---CEeeecccCcc
Confidence            589999999999998776655555554443333322   223478899999999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                +.|||.++........  .....++..|+||
T Consensus       132 Ili~~~~~~kl~DFG~a~~~~~~~~~--~~~~~~~~~~~~p  170 (292)
T d1unla_         132 LLINRNGELKLANFGLARAFGIPVRC--YSAEVVTLWYRPP  170 (292)
T ss_dssp             EEECTTCCEEECCCTTCEECCSCCSC--CCSCCSCGGGCCH
T ss_pred             cccccCCceeeeecchhhcccCCCcc--ceeeccccchhhh
Confidence                      4899998866543322  2233455566654

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.5e-19  Score=106.55  Aligned_cols=101  Identities=29%  Similarity=0.424  Sum_probs=72.2

Q ss_pred             CCCccceeeeeeeeeCCccc---hhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCC
Q 047898            1 LKHENLVELLGYCVEGNLRD---ELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIR   77 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~   77 (111)
                      ++|||||+++++|...+...   .++.+++.+.. . +........+++..+..++.|++.|+.|||++   +++|||+|
T Consensus        74 l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~-~-l~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~IiHrDiK  148 (346)
T d1cm8a_          74 MRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGT-D-LGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLK  148 (346)
T ss_dssp             CCBTTBCCCSEEECSCSSTTTCCCCEEEEECCSE-E-HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCC
T ss_pred             cCCCCeeEEEEEeccCccccccceEEEEEecccc-c-HHHHHHhccccHHHHHHHHHHHHHHHHHHHhC---CCcccccC
Confidence            58999999999998754321   12222332211 1 11111123389999999999999999999999   99999999


Q ss_pred             CCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           78 SSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        78 ~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |+|          ++|||.++.....     .....+|+.|+||
T Consensus       149 p~NIL~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aP  187 (346)
T d1cm8a_         149 PGNLAVNEDCELKILDFGLARQADSE-----MTGYVVTRWYRAP  187 (346)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECCSS-----CCSSCSCGGGCCT
T ss_pred             cchhhcccccccccccccceeccCCc-----cccccccccccCH
Confidence            999          4899998765433     2345789999998

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=6.2e-19  Score=102.79  Aligned_cols=105  Identities=25%  Similarity=0.311  Sum_probs=70.6

Q ss_pred             CCCccceeeeeeeeeCCcc--------chhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCee
Q 047898            1 LKHENLVELLGYCVEGNLR--------DELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSII   72 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~   72 (111)
                      ++||||+++++++......        ..+++++..+.....   ......++..++..++.|++.|+.|+|++   +++
T Consensus        66 l~h~nii~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~~~~~---~~~~~~~~~~~~~~i~~qil~~l~~lH~~---~iv  139 (318)
T d3blha1          66 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLL---SNVLVKFTLSEIKRVMQMLLNGLYYIHRN---KIL  139 (318)
T ss_dssp             CCCTTBCCEEEEEEC----------CEEEEEECCCEEHHHHH---TCTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred             hcCCCccceEeeeecccccccccCceEEEEEeccCCCccchh---hhcccccccHHHHHHHHHHHHHHHHhccC---CEE
Confidence            6899999999998764321        122233332222211   12233488899999999999999999999   999


Q ss_pred             ecCCCCCC----------cCCCcccccCCCCcccc--cccccCccccccCC
Q 047898           73 QRDIRSSN----------IADFNLSNQAPNMAARL--HSTRVLGTFSYHAP  111 (111)
Q Consensus        73 h~~l~~~n----------i~~~g~~~~~~~~~~~~--~~~~~~~~~~~~aP  111 (111)
                      |||+||+|          +.|||+++.........  ...+.+||+.|+||
T Consensus       140 HrDlKp~NILl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aP  190 (318)
T d3blha1         140 HRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPP  190 (318)
T ss_dssp             CCCCCGGGEEECTTSCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCH
T ss_pred             ecCcCchheeecCCCcEEeeecceeeecccccccccccccceecCHHHhhH
Confidence            99999999          48999987655332211  12345789999997

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.73  E-value=9.4e-19  Score=101.28  Aligned_cols=105  Identities=17%  Similarity=0.235  Sum_probs=69.4

Q ss_pred             CCCccceee-eeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 047898            1 LKHENLVEL-LGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSS   79 (111)
Q Consensus         1 l~h~~iv~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~   79 (111)
                      ++|+|+|.. .+++...+....+.+++. +.+......  ....++...+..++.|++.|+.|+|++   +++|||+||+
T Consensus        59 l~~~~~i~~~~~~~~~~~~~~ivme~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiHrDiKp~  132 (299)
T d1ckia_          59 MQGGVGIPTIRWCGAEGDYNVMVMELLG-PSLEDLFNF--CSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPD  132 (299)
T ss_dssp             STTSTTCCCEEEEEEETTEEEEEEECCC-CBHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGG
T ss_pred             ccCCCcccEEEEEEecCCEEEEEEEEcC-Cchhhhhhh--ccCCCcHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHh
Confidence            456665554 555555444433434432 222111111  223389999999999999999999999   9999999999


Q ss_pred             Cc-------------CCCcccccCCCCccc-----ccccccCccccccCC
Q 047898           80 NI-------------ADFNLSNQAPNMAAR-----LHSTRVLGTFSYHAP  111 (111)
Q Consensus        80 ni-------------~~~g~~~~~~~~~~~-----~~~~~~~~~~~~~aP  111 (111)
                      ||             +|||+++........     ....+..||+.||||
T Consensus       133 NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  182 (299)
T d1ckia_         133 NFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI  182 (299)
T ss_dssp             GEEECCGGGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCH
T ss_pred             hccccccCCCceeeeeccCcceeccccccccceeccccCCcCCCccccCH
Confidence            93             799999876543211     113456799999997

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.72  E-value=2.3e-18  Score=99.46  Aligned_cols=103  Identities=17%  Similarity=0.190  Sum_probs=74.9

Q ss_pred             CccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC--
Q 047898            3 HENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN--   80 (111)
Q Consensus         3 h~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n--   80 (111)
                      |+|++.+++++..+.....+.+++ .+.+......  ....++..+...++.|++.|+.|+|++   +++|||+||+|  
T Consensus        60 ~~~i~~~~~~~~~~~~~~~vme~~-~~~l~~~~~~--~~~~~~~~~~~~i~~q~~~~l~~lH~~---giiHrDiKp~Nil  133 (293)
T d1csna_          60 CTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDL--CGRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFL  133 (293)
T ss_dssp             CTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEE
T ss_pred             CCCCCEEEEEeecCCccEEEEEec-CCCHHHHHHh--hccchhhHHHHHHHHHHHHHHHHHHHC---CceeccCCcccee
Confidence            489999999998877655555554 2333333222  223388999999999999999999999   99999999999  


Q ss_pred             -------------cCCCcccccCCCCccc-----ccccccCccccccCC
Q 047898           81 -------------IADFNLSNQAPNMAAR-----LHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 -------------i~~~g~~~~~~~~~~~-----~~~~~~~~~~~~~aP  111 (111)
                                   ++|||+++........     ....+..||+.||||
T Consensus       134 i~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aP  182 (293)
T d1csna_         134 IGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSI  182 (293)
T ss_dssp             ECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCH
T ss_pred             ecCcccccCCceEEcccceeEEcccCccccceeecccCceEEchhhcCH
Confidence                         3799998865432211     113456799999998

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=3.4e-18  Score=99.89  Aligned_cols=103  Identities=23%  Similarity=0.186  Sum_probs=77.5

Q ss_pred             CC-ccceeeeeeeeeCCccchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 047898            2 KH-ENLVELLGYCVEGNLRDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN   80 (111)
Q Consensus         2 ~h-~~iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n   80 (111)
                      +| |||+++++++.+......+.+++..+++......   ...++...+..++.|++.|+.|+|++   +++|||++|+|
T Consensus        86 ~h~pnIv~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~---~~~~~e~~~~~~~~Qi~~al~~lH~~---~ivHrDiKp~N  159 (322)
T d1vzoa_          86 RQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQ---RERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLEN  159 (322)
T ss_dssp             HTCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGG
T ss_pred             cCCCeEEEeeeeeccCCceeeeeecccccHHHHHHHh---cccccHHHHHHHHHHHHHHHHHhhcC---CEEeccCCccc
Confidence            35 8999999999987766666666665555444332   22367888899999999999999999   99999999999


Q ss_pred             ----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           81 ----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        81 ----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                                ++|||+++........ ...+..|++.|+||
T Consensus       160 ill~~~~~vkL~DFG~a~~~~~~~~~-~~~~~~g~~~~~~p  199 (322)
T d1vzoa_         160 ILLDSNGHVVLTDFGLSKEFVADETE-RAYDFCGTIEYMAP  199 (322)
T ss_dssp             EEECTTSCEEESCSSEEEECCGGGGG-GGCGGGSCCTTCCH
T ss_pred             eeecCCCCEEEeeccchhhhcccccc-cccccccccccchh
Confidence                      4899998766543322 13345678888876

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=6.3e-18  Score=99.52  Aligned_cols=99  Identities=29%  Similarity=0.396  Sum_probs=68.6

Q ss_pred             CCCccceeeeeeeeeCCc-----cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecC
Q 047898            1 LKHENLVELLGYCVEGNL-----RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQRD   75 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~   75 (111)
                      ++|||||++++++.....     ...+++++..+++...+.    ...+++.++..++.|++.|+.|||++   +++|||
T Consensus        74 l~h~~iv~~~~~~~~~~~~~~~~~~~i~~~~~gg~L~~~~~----~~~l~e~~~~~i~~qil~aL~~LH~~---giiHrD  146 (348)
T d2gfsa1          74 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRD  146 (348)
T ss_dssp             CCCTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCC
T ss_pred             cCCCCeeeEEEEEeeccccccCceEEEEEeecCCchhhhcc----cccccHHHHHHHHHHHHHHHHHHHhC---CCcccc
Confidence            589999999999975332     123334444444444332    12389999999999999999999999   999999


Q ss_pred             CCCCCc----------CCCcccccCCCCcccccccccCccccccCC
Q 047898           76 IRSSNI----------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        76 l~~~ni----------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +||+||          .|||.+......     ..+..|+..|+||
T Consensus       147 iKp~NILi~~~~~~kl~dfg~a~~~~~~-----~~~~~g~~~y~ap  187 (348)
T d2gfsa1         147 LKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP  187 (348)
T ss_dssp             CCGGGEEECTTCCEEECCC----CCTGG-----GSSSCHHHHTSCH
T ss_pred             cCCccccccccccccccccchhcccCcc-----cccccccccccCc
Confidence            999993          788877544322     2345678888876

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=5.3e-18  Score=100.20  Aligned_cols=99  Identities=27%  Similarity=0.383  Sum_probs=63.9

Q ss_pred             CCCccceeeeeeeeeCCc------cchhhhhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeec
Q 047898            1 LKHENLVELLGYCVEGNL------RDELIWIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHEKVQPSIIQR   74 (111)
Q Consensus         1 l~h~~iv~l~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~   74 (111)
                      ++|||||+++++|...+.      ..++.+++..+.+. ..     ...+++.++..++.|++.|+.|+|++   +++||
T Consensus        73 l~hpnIv~~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~-~~-----~~~~~~~~i~~~~~qil~gl~~LH~~---giiHr  143 (355)
T d2b1pa1          73 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ-VI-----QMELDHERMSYLLYQMLCGIKHLHSA---GIIHR  143 (355)
T ss_dssp             CCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHH-HH-----TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred             cCCCCeeEEEEEEecccccccCceeEEEEeccchHHHH-hh-----hcCCCHHHHHHHHHHHHHHHHHhhhc---ccccc
Confidence            589999999999975432      12333444322221 11     12388999999999999999999999   99999


Q ss_pred             CCCCCC----------cCCCcccccCCCCcccccccccCccccccCC
Q 047898           75 DIRSSN----------IADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        75 ~l~~~n----------i~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      |+||+|          ++|||.++.......   .....+|..|+||
T Consensus       144 DlKP~Nil~~~~~~~kl~df~~~~~~~~~~~---~~~~~~t~~y~aP  187 (355)
T d2b1pa1         144 DLKPSNIVVKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYYRAP  187 (355)
T ss_dssp             CCCGGGEEECTTCCEEECCCCC------------------CCTTCCH
T ss_pred             cCCccccccccccceeeechhhhhccccccc---cccccccccccCh
Confidence            999999          378887765443322   2345688899987

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.48  E-value=3.9e-15  Score=87.82  Aligned_cols=102  Identities=19%  Similarity=0.197  Sum_probs=66.9

Q ss_pred             CCccceeeeeeeeeCCccchhh--hhhhhhhcccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeecCCCC
Q 047898            2 KHENLVELLGYCVEGNLRDELI--WIIHVITCKKGVQGAQPSPVLDWMTRVRIVVDALRGLEYLHE-KVQPSIIQRDIRS   78 (111)
Q Consensus         2 ~h~~iv~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~-~~~~~i~h~~l~~   78 (111)
                      .|+||+++++++..........  ....................++...+..++.|++.|+.|+|+ .   +++|||+||
T Consensus        78 ~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~---~IvHrDlKp  154 (362)
T d1q8ya_          78 GANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC---GIIHTDIKP  154 (362)
T ss_dssp             HHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT---CEECSCCSG
T ss_pred             CcCceEEEEEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhc---CcccccCCh
Confidence            3789999999987533222211  111111111111112233447889999999999999999998 6   899999999


Q ss_pred             CCc----------------CCCcccccCCCCcccccccccCccccccCC
Q 047898           79 SNI----------------ADFNLSNQAPNMAARLHSTRVLGTFSYHAP  111 (111)
Q Consensus        79 ~ni----------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~aP  111 (111)
                      +||                .|||.+......     .....||+.|+||
T Consensus       155 ~NIll~~~~~~~~~~~~kl~dfg~s~~~~~~-----~~~~~gt~~y~aP  198 (362)
T d1q8ya_         155 ENVLMEIVDSPENLIQIKIADLGNACWYDEH-----YTNSIQTREYRSP  198 (362)
T ss_dssp             GGEEEEEEETTTTEEEEEECCCTTCEETTBC-----CCSCCSCGGGCCH
T ss_pred             hHeeeeccCcccccceeeEeecccccccccc-----cccccccccccCh
Confidence            993                677776544322     2345789999987

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.04  E-value=8.8e-11  Score=63.57  Aligned_cols=44  Identities=18%  Similarity=0.201  Sum_probs=37.1

Q ss_pred             CHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC---------cCCCcccccCC
Q 047898           45 DWMTRVRIVVDALRGLEYLHEKVQPSIIQRDIRSSN---------IADFNLSNQAP   91 (111)
Q Consensus        45 ~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~~l~~~n---------i~~~g~~~~~~   91 (111)
                      +......++.|++.++.++|++   +++|+|+||+|         +.|||.+....
T Consensus       101 ~~~~~~~i~~ql~~~l~~lH~~---giiHrDiKP~NILv~~~~~~liDFG~a~~~~  153 (191)
T d1zara2         101 RVENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVSEEGIWIIDFPQSVEVG  153 (191)
T ss_dssp             CCSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEETTEEEECCCTTCEETT
T ss_pred             hhHHHHHHHHHHHHHHHHHhhC---CEEEccCChhheeeeCCCEEEEECCCcccCC
Confidence            3344567889999999999999   99999999999         48999886654